Your job contains 1 sequence.
>psy4510
MNSVHLNSCPALEASNDIVDNDSDEDMEQGEESKDKTKPDESKEEKEKKTRKVYLPGTPL
DKGESLVYDPSAYVMLHEAQTGAPCLSFDIIKDELGDERTAYPQTLYAVAGTQSKKFNFN
RLIVMKMSNLTSTEEDNERELEDDENDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGF
AMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQT
VDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIW
TPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLT
LPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWH
PTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHP
QLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNI
FRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGS
TTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGF
AMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSVYLYTNRFGVLATGDCKRNIHIWTPRE
AGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRIGARRDMLYCFFVSLVHCI
FVWLKYQLFVDVYYWAFVDLVYYIFPDLHYFF
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy4510
(812 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0022288 - symbol:l(2)09851 "lethal (2) 09851" spec... 918 1.8e-118 2
UNIPROTKB|F1RL85 - symbol:GRWD1 "Uncharacterized protein"... 907 4.2e-115 2
UNIPROTKB|Q1JQD2 - symbol:GRWD1 "Glutamate-rich WD repeat... 897 4.8e-114 2
MGI|MGI:2141989 - symbol:Grwd1 "glutamate-rich WD repeat ... 898 6.1e-114 2
UNIPROTKB|E2RBY0 - symbol:GRWD1 "Uncharacterized protein"... 889 5.5e-113 2
RGD|1310649 - symbol:Grwd1 "glutamate-rich WD repeat cont... 893 4.3e-92 2
UNIPROTKB|Q9BQ67 - symbol:GRWD1 "Glutamate-rich WD repeat... 893 7.0e-92 2
ZFIN|ZDB-GENE-030131-9844 - symbol:grwd1 "glutamate-rich ... 838 1.2e-83 1
TAIR|locus:2050388 - symbol:AT2G19540 "AT2G19540" species... 657 8.3e-83 2
ASPGD|ASPL0000069856 - symbol:AN7205 species:162425 "Emer... 568 2.3e-74 2
WB|WBGene00021899 - symbol:Y54H5A.1 species:6239 "Caenorh... 682 4.0e-67 1
CGD|CAL0001341 - symbol:orf19.6355 species:5476 "Candida ... 492 3.4e-63 2
UNIPROTKB|Q59PD8 - symbol:RRB1 "Likely nucleolar ribosome... 492 3.4e-63 2
POMBASE|SPBC1711.07 - symbol:SPBC1711.07 "WD repeat prote... 638 1.8e-62 1
DICTYBASE|DDB_G0291566 - symbol:grwd1 "glutamate-rich WD ... 628 2.1e-61 1
SGD|S000004738 - symbol:RRB1 "Nuclear protein involved in... 470 3.3e-60 2
ASPGD|ASPL0000017699 - symbol:AN8187 species:162425 "Emer... 315 3.0e-27 1
UNIPROTKB|E9PC52 - symbol:RBBP7 "Histone-binding protein ... 312 6.4e-27 1
UNIPROTKB|K7GRD3 - symbol:LOC100519001 "Uncharacterized p... 312 6.4e-27 1
UNIPROTKB|I3LKT8 - symbol:RBBP4 "Uncharacterized protein"... 311 8.2e-27 1
UNIPROTKB|Q3SWX8 - symbol:RBBP7 "Histone-binding protein ... 312 1.3e-26 1
UNIPROTKB|E2RM49 - symbol:RBBP7 "Uncharacterized protein"... 312 1.3e-26 1
UNIPROTKB|Q16576 - symbol:RBBP7 "Histone-binding protein ... 312 1.3e-26 1
UNIPROTKB|F1SQR0 - symbol:LOC100519001 "Uncharacterized p... 312 1.3e-26 1
UNIPROTKB|Q4R304 - symbol:RBBP7 "Histone-binding protein ... 312 1.3e-26 1
MGI|MGI:1194910 - symbol:Rbbp7 "retinoblastoma binding pr... 312 1.3e-26 1
RGD|620125 - symbol:Rbbp7 "retinoblastoma binding protein... 312 1.3e-26 1
FB|FBgn0263979 - symbol:Caf1 "Chromatin assembly factor 1... 314 1.6e-26 1
UNIPROTKB|F2Z4M0 - symbol:RBBP4 "Histone-binding protein ... 311 2.5e-26 1
UNIPROTKB|Q9W7I5 - symbol:RBBP4 "Histone-binding protein ... 311 2.5e-26 1
UNIPROTKB|Q3MHL3 - symbol:RBBP4 "Histone-binding protein ... 311 2.5e-26 1
UNIPROTKB|E2QXR8 - symbol:RBBP4 "Uncharacterized protein"... 311 2.5e-26 1
UNIPROTKB|Q09028 - symbol:RBBP4 "Histone-binding protein ... 311 2.5e-26 1
UNIPROTKB|Q5M7K4 - symbol:rbbp4 "Histone-binding protein ... 311 2.5e-26 1
UNIPROTKB|Q5RF92 - symbol:RBBP4 "Histone-binding protein ... 311 2.5e-26 1
MGI|MGI:1194912 - symbol:Rbbp4 "retinoblastoma binding pr... 311 2.5e-26 1
RGD|1593768 - symbol:Rbbp4 "retinoblastoma binding protei... 311 2.5e-26 1
UNIPROTKB|O93377 - symbol:rbbp4-a "Histone-binding protei... 311 2.5e-26 1
UNIPROTKB|Q6INH0 - symbol:rbbp4-b "Histone-binding protei... 308 1.2e-25 1
ZFIN|ZDB-GENE-030131-445 - symbol:rbb4 "retinoblastoma bi... 312 1.3e-25 1
ZFIN|ZDB-GENE-030131-848 - symbol:rbb4l "retinoblastoma b... 308 1.4e-25 1
WB|WBGene00004312 - symbol:rba-1 species:6239 "Caenorhabd... 289 2.8e-25 2
UNIPROTKB|E2RM67 - symbol:RBBP7 "Uncharacterized protein"... 312 2.9e-25 1
UNIPROTKB|I3LV46 - symbol:LOC100519001 "Uncharacterized p... 312 2.9e-25 1
UNIPROTKB|Q6P315 - symbol:rbbp7 "Histone-binding protein ... 304 5.6e-25 1
UNIPROTKB|Q8AVH1 - symbol:rbbp7 "Histone-binding protein ... 303 8.4e-25 1
UNIPROTKB|Q5R654 - symbol:RBBP7 "Histone-binding protein ... 300 2.4e-24 1
RGD|1563620 - symbol:RGD1563620 "similar to retinoblastom... 296 7.8e-24 1
DICTYBASE|DDB_G0282529 - symbol:rbbD "putative Retinoblas... 285 1.9e-22 1
WB|WBGene00003036 - symbol:lin-53 species:6239 "Caenorhab... 282 3.7e-22 1
UNIPROTKB|P90916 - symbol:lin-53 "Probable histone-bindin... 282 3.7e-22 1
UNIPROTKB|Q61Y48 - symbol:lin-53 "Probable histone-bindin... 274 3.5e-21 1
TAIR|locus:2131551 - symbol:MSI3 "MULTICOPY SUPPRESSOR OF... 269 1.6e-20 1
TAIR|locus:2059856 - symbol:MSI2 "AT2G16780" species:3702... 259 2.0e-19 1
UNIPROTKB|B0XAF3 - symbol:Ciao1 "Probable cytosolic iron-... 236 5.2e-18 2
UNIPROTKB|H0YCT5 - symbol:RBBP4 "Histone-binding protein ... 223 2.4e-17 1
TAIR|locus:2050372 - symbol:FVE species:3702 "Arabidopsis... 236 7.6e-17 2
UNIPROTKB|H3BPK1 - symbol:KATNB1 "Katanin p80 WD40 repeat... 187 1.7e-16 2
UNIPROTKB|Q17GR9 - symbol:Ciao1 "Probable cytosolic iron-... 214 2.5e-16 2
TAIR|locus:2134408 - symbol:NFC5 "AT4G29730" species:3702... 231 3.6e-16 2
UNIPROTKB|H3BPD8 - symbol:KATNB1 "Katanin p80 WD40 repeat... 179 1.2e-15 2
DICTYBASE|DDB_G0279801 - symbol:pex7 "peroxisomal biogene... 217 2.2e-15 1
TAIR|locus:2043929 - symbol:AT2G43770 "AT2G43770" species... 192 3.0e-15 2
FB|FBgn0015754 - symbol:Lis-1 "Lissencephaly-1" species:7... 203 7.4e-15 2
DICTYBASE|DDB_G0269728 - symbol:ciao1 "putative cytosolic... 198 1.9e-14 2
UNIPROTKB|Q7PS24 - symbol:Ciao1 "Probable cytosolic iron-... 205 1.3e-13 1
TAIR|locus:2150788 - symbol:AT5G08390 "AT5G08390" species... 211 2.5e-13 1
DICTYBASE|DDB_G0271788 - symbol:wdr57 "putative U5 small ... 173 3.2e-13 2
UNIPROTKB|B4P7Q3 - symbol:Ciao1 "Probable cytosolic iron-... 191 4.9e-13 2
UNIPROTKB|G4MRA1 - symbol:MGG_04693 "WD repeat-containing... 179 1.3e-12 2
UNIPROTKB|B3MC74 - symbol:Ciao1 "Probable cytosolic iron-... 189 1.4e-12 2
SGD|S000000399 - symbol:MSI1 "Subunit of chromatin assemb... 185 1.5e-12 2
UNIPROTKB|B4MY77 - symbol:Ciao1 "Probable cytosolic iron-... 189 1.7e-12 2
UNIPROTKB|B3NQR5 - symbol:Ciao1 "Probable cytosolic iron-... 186 1.9e-12 2
UNIPROTKB|Q9I8G9 - symbol:RBBP7 "Histone-binding protein ... 197 2.2e-12 1
UNIPROTKB|Q5BJ90 - symbol:wdr12 "Ribosome biogenesis prot... 193 2.7e-12 2
TAIR|locus:2154438 - symbol:AT5G23430 "AT5G23430" species... 201 3.0e-12 1
ASPGD|ASPL0000041012 - symbol:AN9085 species:162425 "Emer... 170 3.1e-12 2
FB|FBgn0021874 - symbol:Nle "Notchless" species:7227 "Dro... 171 3.6e-12 2
RGD|1308483 - symbol:Pex7 "peroxisomal biogenesis factor ... 191 3.7e-12 1
UNIPROTKB|Q8R537 - symbol:PEX7 "Peroxisomal targeting sig... 190 4.9e-12 1
MGI|MGI:1321392 - symbol:Pex7 "peroxisomal biogenesis fac... 190 4.9e-12 1
UNIPROTKB|A7RWD2 - symbol:v1g226592 "Probable cytosolic i... 190 5.6e-12 1
UNIPROTKB|B4GDM7 - symbol:Ciao1 "Probable cytosolic iron-... 190 6.2e-12 1
UNIPROTKB|Q292E8 - symbol:Ciao1 "Probable cytosolic iron-... 190 6.2e-12 1
TAIR|locus:2057381 - symbol:emb1345 "AT2G26060" species:3... 164 6.6e-12 2
FB|FBgn0033972 - symbol:Ciao1 "Ciao1" species:7227 "Droso... 181 7.7e-12 2
UNIPROTKB|Q9GZL7 - symbol:WDR12 "Ribosome biogenesis prot... 189 7.9e-12 2
RGD|735072 - symbol:Wdr12 "WD repeat domain 12" species:1... 187 7.9e-12 2
UNIPROTKB|E1BYP4 - symbol:PEX7 "Uncharacterized protein" ... 188 8.8e-12 1
UNIPROTKB|Q5REE6 - symbol:WDR12 "Ribosome biogenesis prot... 188 1.0e-11 2
UNIPROTKB|A8X8C6 - symbol:tag-125 "WD repeat-containing p... 189 1.2e-11 1
UNIPROTKB|Q32PJ6 - symbol:CIAO1 "Probable cytosolic iron-... 171 1.2e-11 2
UNIPROTKB|Q08DL6 - symbol:PEX7 "Peroxisomal biogenesis fa... 187 1.2e-11 1
ZFIN|ZDB-GENE-040426-839 - symbol:ciao1 "cytosolic iron-s... 172 1.2e-11 2
SGD|S000000668 - symbol:RSA4 "WD-repeat protein involved ... 182 1.2e-11 2
UNIPROTKB|B4QFZ8 - symbol:Ciao1 "Probable cytosolic iron-... 179 1.3e-11 2
UNIPROTKB|B4HRQ6 - symbol:Ciao1 "Probable cytosolic iron-... 179 1.3e-11 2
UNIPROTKB|B5X212 - symbol:ciao1b "Probable cytosolic iron... 187 1.3e-11 1
UNIPROTKB|B4JW81 - symbol:Ciao1 "Probable cytosolic iron-... 182 1.4e-11 2
WARNING: Descriptions of 941 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0022288 [details] [associations]
symbol:l(2)09851 "lethal (2) 09851" species:7227 "Drosophila
melanogaster" [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE013599 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 GeneTree:ENSGT00550000075124
KO:K14848 OMA:NRLMMLR EMBL:AY071477 EMBL:AY128462
RefSeq:NP_610182.3 UniGene:Dm.1493 UniGene:Dm.36762 SMR:Q8SYL1
IntAct:Q8SYL1 STRING:Q8SYL1 EnsemblMetazoa:FBtr0086043 GeneID:46662
KEGG:dme:Dmel_CG12792 UCSC:CG12792-RA FlyBase:FBgn0022288
InParanoid:Q8SYL1 OrthoDB:EOG441NSN GenomeRNAi:46662 NextBio:838859
Uniprot:Q8SYL1
Length = 456
Score = 918 (328.2 bits), Expect = 1.8e-118, Sum P(2) = 1.8e-118
Identities = 171/283 (60%), Positives = 207/283 (73%)
Query: 224 NSAEDLQWSDL-KTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSS 282
NS WS+L + + + P Q E+ + + P+F+F GH EGFA+DWS
Sbjct: 173 NSVYAASWSELGRVNIWDLTQPLQAVENAQLAKQYEQSEARPVFTFGGHQQEGFAIDWSP 232
Query: 283 TEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDL 342
+ GVLATGDC+R+IH+WTP E G W+VDQ+PL GH+ SVEDLQWSP E+ VLASCSVD
Sbjct: 233 SADGVLATGDCRRDIHVWTPVEDGTWKVDQRPLAGHSQSVEDLQWSPNERSVLASCSVDK 292
Query: 343 SIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGS 402
+IRIWD R K+CMLT +AH SDVNVISWNR EP I SGGDDG +H+WDLR+F+
Sbjct: 293 TIRIWDCRASPQKACMLTCEDAHQSDVNVISWNRNEPFIASGGDDGYLHIWDLRQFQSKK 352
Query: 403 SVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSE--IE--QREAELKD 458
+ATFKHHT +TTVEW P E++ ASGG DDQIALWDLAVE+D + ++ Q E L
Sbjct: 353 PIATFKHHTDHITTVEWSPAEATVLASGGDDDQIALWDLAVEKDIDQAVDPAQNEDVLNK 412
Query: 459 LPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTIS 501
LP QLLFIH GQKEIKELHWHPQLPG ++STA+SGFNIFRTIS
Sbjct: 413 LPPQLLFIHQGQKEIKELHWHPQLPGVLLSTAHSGFNIFRTIS 455
Score = 345 (126.5 bits), Expect = 3.5e-56, Sum P(2) = 3.5e-56
Identities = 78/210 (37%), Positives = 115/210 (54%)
Query: 148 PFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPR 207
P Q E+ + + P+F+F GH EGFA+DWS + GVLATGDC+R+IH+WTP
Sbjct: 194 PLQAVENAQLAKQYEQSEARPVFTFGGHQQEGFAIDWSPSADGVLATGDCRRDIHVWTPV 253
Query: 208 EAGAWQVDQKPLGGHTNSAEDLQWS-DLKTALQT--VDDPFQLAEHNKKRGKGPGIPTPP 264
E G W+VDQ+PL GH+ S EDLQWS + ++ L + VD ++ + K +
Sbjct: 254 EDGTWKVDQRPLAGHSQSVEDLQWSPNERSVLASCSVDKTIRIWDCRASPQKACMLTCE- 312
Query: 265 LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVG---HTNS 321
H ++ + W+ EP + + GD +HIW R+ +Q +KP+ HT+
Sbjct: 313 ----DAHQSDVNVISWNRNEPFIASGGD-DGYLHIWDLRQ---FQ-SKKPIATFKHHTDH 363
Query: 322 VEDLQWSPGEKRVLASCSVDLSIRIWDTRV 351
+ ++WSP E VLAS D I +WD V
Sbjct: 364 ITTVEWSPAEATVLASGGDDDQIALWDLAV 393
Score = 301 (111.0 bits), Expect = 4.5e-48, Sum P(2) = 4.5e-48
Identities = 56/120 (46%), Positives = 77/120 (64%)
Query: 575 KDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEH 634
K P M ++H+GC+NRVR + G++ A W E+G+V IWDL LQ V++ QLA+
Sbjct: 148 KKPQMTCALVKHQGCVNRVRARRLGNSVYAASWSELGRVNIWDLTQPLQAVENA-QLAKQ 206
Query: 635 NKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSV 694
++ P+F+F GH EGFA+DWS + GVLATGDC+R+IH+WTP E G W V
Sbjct: 207 YEQS------EARPVFTFGGHQQEGFAIDWSPSADGVLATGDCRRDIHVWTPVEDGTWKV 260
Score = 294 (108.6 bits), Expect = 3.8e-47, Sum P(2) = 3.8e-47
Identities = 79/240 (32%), Positives = 117/240 (48%)
Query: 317 GHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNA-HTSDVNVISWN 375
GH + WSP VLA+ I +W T V + + P A H+ V + W+
Sbjct: 220 GHQQEGFAIDWSPSADGVLATGDCRRDIHVW-TPVEDGTWKVDQRPLAGHSQSVEDLQWS 278
Query: 376 RTE-PLIVSGGDDGCIHVWDLRRFKKGSSVATFKH-HTAPVTTVEWHPTESSTFASGGAD 433
E ++ S D I +WD R + + + T + H + V + W+ E ASGG D
Sbjct: 279 PNERSVLASCSVDKTIRIWDCRASPQKACMLTCEDAHQSDVNVISWNRNEPF-IASGGDD 337
Query: 434 DQIALWDLAVERDSE----IEQREAELKDL---PSQLLFIHLGQKEIKELHWHPQLPGTI 486
+ +WDL + + + + + P++ + G + + W + I
Sbjct: 338 GYLHIWDLRQFQSKKPIATFKHHTDHITTVEWSPAEATVLASGGDDDQIALWDLAVEKDI 397
Query: 487 ISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISM 546
+ N ++ LP QLLFIH GQKEIKELHWHPQLPG ++STA+SGFNIFRTIS+
Sbjct: 398 DQAVDPAQNE-DVLNKLPPQLLFIHQGQKEIKELHWHPQLPGVLLSTAHSGFNIFRTISV 456
Score = 269 (99.8 bits), Expect = 1.8e-118, Sum P(2) = 1.8e-118
Identities = 53/83 (63%), Positives = 62/83 (74%)
Query: 51 RKVYLPGTPLDKGESLVYDPSAYVMLHEAQTGAPCLSFDIIKDELGDERTAYPQTLYAVA 110
++VYLPGT L E LV D SAYVMLH+A TGAPCLSFD+I DELG R ++P T Y VA
Sbjct: 41 KEVYLPGTKLADDEELVCDESAYVMLHQASTGAPCLSFDVIPDELGSGRQSFPMTAYIVA 100
Query: 111 GTQSKKFNFNRLIVMKMSNLTST 133
GTQ+ + + N LIVMKMSNL T
Sbjct: 101 GTQASRAHVNNLIVMKMSNLHKT 123
Score = 255 (94.8 bits), Expect = 1.4e-42, Sum P(2) = 1.4e-42
Identities = 44/61 (72%), Positives = 53/61 (86%)
Query: 702 GVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNR 761
GVLATGDC+R+IH+WTP E G W+VDQ+PL GH+ SVEDLQWSP E+ VLASCSVD++ R
Sbjct: 236 GVLATGDCRRDIHVWTPVEDGTWKVDQRPLAGHSQSVEDLQWSPNERSVLASCSVDKTIR 295
Query: 762 I 762
I
Sbjct: 296 I 296
Score = 91 (37.1 bits), Expect = 2.2e-25, Sum P(2) = 2.2e-25
Identities = 33/118 (27%), Positives = 53/118 (44%)
Query: 653 SGHLTEGFAMDWSSTEPGVLATGDCKRNIHIW----TPREA----------GAWSVYLYT 698
+GH + WS E VLA+ + I IW +P++A +V +
Sbjct: 266 AGHSQSVEDLQWSPNERSVLASCSVDKTIRIWDCRASPQKACMLTCEDAHQSDVNVISWN 325
Query: 699 NRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVG---HTNSVEDLQWSPGEKRVLAS 753
+A+G +HIW R+ +Q +KP+ HT+ + ++WSP E VLAS
Sbjct: 326 RNEPFIASGGDDGYLHIWDLRQ---FQ-SKKPIATFKHHTDHITTVEWSPAEATVLAS 379
Score = 58 (25.5 bits), Expect = 6.3e-22, Sum P(2) = 6.3e-22
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 648 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIW 684
P+ +F H ++WS E VLA+G I +W
Sbjct: 353 PIATFKHHTDHITTVEWSPAEATVLASGGDDDQIALW 389
Score = 47 (21.6 bits), Expect = 4.8e-95, Sum P(2) = 4.8e-95
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 5 HLNSCPALEASN--DIVDNDSDEDME 28
H+N+ ++ SN DND DED E
Sbjct: 108 HVNNLIVMKMSNLHKTQDNDGDEDEE 133
Score = 38 (18.4 bits), Expect = 7.6e-20, Sum P(2) = 7.6e-20
Identities = 8/21 (38%), Positives = 10/21 (47%)
Query: 733 GHTNSVEDLQWSPGEKRVLAS 753
GH + WSP VLA+
Sbjct: 220 GHQQEGFAIDWSPSADGVLAT 240
>UNIPROTKB|F1RL85 [details] [associations]
symbol:GRWD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
GeneTree:ENSGT00550000075124 KO:K14848 OMA:NRLMMLR EMBL:FP102301
RefSeq:XP_003127319.1 UniGene:Ssc.24214 Ensembl:ENSSSCT00000003475
GeneID:100521273 KEGG:ssc:100521273 Uniprot:F1RL85
Length = 445
Score = 907 (324.3 bits), Expect = 4.2e-115, Sum P(2) = 4.2e-115
Identities = 168/293 (57%), Positives = 209/293 (71%)
Query: 211 AWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSG 270
+W + ++P+ G + ++ L+ LQ VDDP LA R + + P+F+FSG
Sbjct: 157 SW-LGEEPVAGVWSEKGQVEVFALRRLLQVVDDPQALATF--LRDEQARVK--PIFAFSG 211
Query: 271 HLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPG 330
H+ EGFA+DWS PG L TGDC++NIH+WTP ++G+W VDQ+P VGHT SVEDLQWSP
Sbjct: 212 HMGEGFALDWSPRVPGRLLTGDCQKNIHLWTPTDSGSWHVDQRPFVGHTRSVEDLQWSPT 271
Query: 331 EKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCI 390
E V ASCS D SIRIWD R +K+CMLT P AH DVNVISW+R EP ++SGGDDG +
Sbjct: 272 EDTVFASCSADASIRIWDIRAAPSKACMLTTPAAHNGDVNVISWSRQEPFLLSGGDDGAL 331
Query: 391 HVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIE 450
VWDLR+FK GS VATFK H APVT+VEWHP +S FA+ GAD+QI WDLAVERD E
Sbjct: 332 KVWDLRQFKSGSPVATFKQHVAPVTSVEWHPQDSGVFAASGADNQITQWDLAVERDPEAG 391
Query: 451 QREAE--LKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTIS 501
E + L LP QLLF+H G+ ++KELHWHPQ PG ++STA SGF +FRTIS
Sbjct: 392 DTETDPGLVGLPQQLLFVHQGETDLKELHWHPQCPGVLVSTALSGFTVFRTIS 444
Score = 323 (118.8 bits), Expect = 4.1e-65, Sum P(3) = 4.1e-65
Identities = 73/189 (38%), Positives = 101/189 (53%)
Query: 168 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAE 227
P+F+FSGH+ EGFA+DWS PG L TGDC++NIH+WTP ++G+W VDQ+P GHT S E
Sbjct: 205 PIFAFSGHMGEGFALDWSPRVPGRLLTGDCQKNIHLWTPTDSGSWHVDQRPFVGHTRSVE 264
Query: 228 DLQWS---DLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTE 284
DLQWS D A + D ++ + K + TP + H + + WS E
Sbjct: 265 DLQWSPTEDTVFASCSADASIRIWDIRAAPSKACMLTTP-----AAHNGDVNVISWSRQE 319
Query: 285 PGVLATGDCKRNIHIWTPRE--AGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDL 342
P +L+ GD + +W R+ +G+ K V SVE W P + V A+ D
Sbjct: 320 PFLLSGGD-DGALKVWDLRQFKSGSPVATFKQHVAPVTSVE---WHPQDSGVFAASGADN 375
Query: 343 SIRIWDTRV 351
I WD V
Sbjct: 376 QITQWDLAV 384
Score = 285 (105.4 bits), Expect = 3.0e-22, P = 3.0e-22
Identities = 72/185 (38%), Positives = 93/185 (50%)
Query: 511 HLGQKEIKELHWHPQL-PGTIISTANSGFNIFRTISMSNLTSTXXXXXXXXXXXXXXXXX 569
HLG EL L GT +A S N + M NL T
Sbjct: 75 HLGDNRT-ELPLTLYLCAGTQAESAQS--NRLMMLRMHNLHGTKPPPSEGSDEEEEEDEE 131
Query: 570 XXXXRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPF 629
RK P + + H G INRVR G +AGVW E G+V ++ L+ LQ VDDP
Sbjct: 132 DEEERK-PQLELAMVPHYGGINRVRVSWLGEEPVAGVWSEKGQVEVFALRRLLQVVDDPQ 190
Query: 630 QLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREA 689
LA R + + P+F+FSGH+ EGFA+DWS PG L TGDC++NIH+WTP ++
Sbjct: 191 ALATF--LRDEQARVK--PIFAFSGHMGEGFALDWSPRVPGRLLTGDCQKNIHLWTPTDS 246
Query: 690 GAWSV 694
G+W V
Sbjct: 247 GSWHV 251
Score = 248 (92.4 bits), Expect = 4.2e-115, Sum P(2) = 4.2e-115
Identities = 49/84 (58%), Positives = 60/84 (71%)
Query: 52 KVYLPGT--PLDKGESLVYDPSAYVMLHEAQTGAPCLSFDIIKDELGDERTAYPQTLYAV 109
+VYLPG PL +GE LV D AYV+ H AQTGAPCLSFDI++D LGD RT P TLY
Sbjct: 31 QVYLPGRGPPLREGEELVMDEEAYVLYHRAQTGAPCLSFDIVRDHLGDNRTELPLTLYLC 90
Query: 110 AGTQSKKFNFNRLIVMKMSNLTST 133
AGTQ++ NRL++++M NL T
Sbjct: 91 AGTQAESAQSNRLMMLRMHNLHGT 114
Score = 236 (88.1 bits), Expect = 2.8e-38, Sum P(3) = 2.8e-38
Identities = 41/61 (67%), Positives = 48/61 (78%)
Query: 702 GVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNR 761
G L TGDC++NIH+WTP ++G+W VDQ+P VGHT SVEDLQWSP E V ASCS D S R
Sbjct: 227 GRLLTGDCQKNIHLWTPTDSGSWHVDQRPFVGHTRSVEDLQWSPTEDTVFASCSADASIR 286
Query: 762 I 762
I
Sbjct: 287 I 287
Score = 174 (66.3 bits), Expect = 4.1e-65, Sum P(3) = 4.1e-65
Identities = 29/44 (65%), Positives = 37/44 (84%)
Query: 503 LPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISM 546
LP QLLF+H G+ ++KELHWHPQ PG ++STA SGF +FRTIS+
Sbjct: 402 LPQQLLFVHQGETDLKELHWHPQCPGVLVSTALSGFTVFRTISV 445
Score = 103 (41.3 bits), Expect = 3.1e-24, Sum P(2) = 3.1e-24
Identities = 42/179 (23%), Positives = 73/179 (40%)
Query: 363 NAHTSDVNVISWNRTEP-LIVSGGDDGCIHVWDLRRFKKGS---SVATFKHHTAPVTTVE 418
+ H + + W+ P +++G IH+W GS F HT V ++
Sbjct: 210 SGHMGEGFALDWSPRVPGRLLTGDCQKNIHLWTPT--DSGSWHVDQRPFVGHTRSVEDLQ 267
Query: 419 WHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHW 478
W PTE + FAS AD I +WD+ +A + P+ H G ++ + W
Sbjct: 268 WSPTEDTVFASCSADASIRIWDIRAAPS------KACMLTTPAA----HNG--DVNVISW 315
Query: 479 HPQLPGTIISTANSG----FNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIIST 533
Q P ++S + G +++ + S P H+ + + WHPQ G ++
Sbjct: 316 SRQEP-FLLSGGDDGALKVWDLRQFKSGSPVATFKQHVAP--VTSVEWHPQDSGVFAAS 371
Score = 69 (29.3 bits), Expect = 5.4e-21, Sum P(3) = 5.4e-21
Identities = 33/124 (26%), Positives = 47/124 (37%)
Query: 652 FSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSVYLYTNRFGVLATGDCKR 711
F GH + WS TE V A+ +I IW R A + + L T GD
Sbjct: 256 FVGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPSKACMLTTP---AAHNGDV-- 310
Query: 712 NIHIWTPREA--------GA---WQVDQ----KPLVG---HTNSVEDLQWSPGEKRVLAS 753
N+ W+ +E GA W + Q P+ H V ++W P + V A+
Sbjct: 311 NVISWSRQEPFLLSGGDDGALKVWDLRQFKSGSPVATFKQHVAPVTSVEWHPQDSGVFAA 370
Query: 754 CSVD 757
D
Sbjct: 371 SGAD 374
Score = 49 (22.3 bits), Expect = 4.7e-20, Sum P(4) = 4.7e-20
Identities = 9/37 (24%), Positives = 16/37 (43%)
Query: 648 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIW 684
P+ +F H+ +++W + GV A I W
Sbjct: 344 PVATFKQHVAPVTSVEWHPQDSGVFAASGADNQITQW 380
Score = 45 (20.9 bits), Expect = 4.7e-20, Sum P(4) = 4.7e-20
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 586 HRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLK 619
H G +N + + L+G G+ G + +WDL+
Sbjct: 306 HNGDVNVISWSRQEPFLLSG--GDDGALKVWDLR 337
Score = 41 (19.5 bits), Expect = 2.8e-38, Sum P(3) = 2.8e-38
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 372 ISWNRTEPLIVSGGDDGCIHVWDLRR 397
+SW EP+ + G + V+ LRR
Sbjct: 156 VSWLGEEPVAGVWSEKGQVEVFALRR 181
>UNIPROTKB|Q1JQD2 [details] [associations]
symbol:GRWD1 "Glutamate-rich WD repeat-containing protein
1" species:9913 "Bos taurus" [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 EMBL:BC116037 IPI:IPI00715008
RefSeq:NP_001069707.1 UniGene:Bt.3201 ProteinModelPortal:Q1JQD2
STRING:Q1JQD2 Ensembl:ENSBTAT00000000088 GeneID:540739
KEGG:bta:540739 CTD:83743 GeneTree:ENSGT00550000075124
HOGENOM:HOG000036730 HOVERGEN:HBG051847 InParanoid:Q1JQD2 KO:K14848
OMA:NRLMMLR OrthoDB:EOG4CG084 NextBio:20878807 Uniprot:Q1JQD2
Length = 446
Score = 897 (320.8 bits), Expect = 4.8e-114, Sum P(2) = 4.8e-114
Identities = 165/293 (56%), Positives = 205/293 (69%)
Query: 211 AWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSG 270
+W + ++P+ G + ++ L+ LQ VDDP LA + P+F+FSG
Sbjct: 158 SW-LGEEPVAGVWSEKGQVEVFALRRLLQVVDDPQALATFLRDEQTR----MKPIFAFSG 212
Query: 271 HLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPG 330
H+ EGFA+DWS PG L TGDC++NIH+WTP + G+W VDQ+P VGHT SVEDLQWSP
Sbjct: 213 HMGEGFALDWSPRVPGRLLTGDCQKNIHLWTPTDGGSWHVDQRPFVGHTRSVEDLQWSPT 272
Query: 331 EKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCI 390
E V ASCS D SIRIWD R +K+CMLT AH DVNVI+W+ EP ++SGGDDG +
Sbjct: 273 EDTVFASCSADASIRIWDIRAAPSKACMLTTATAHDGDVNVINWSHREPFLLSGGDDGAL 332
Query: 391 HVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIE 450
VWDLR+FK GS VATFK H APVT+VEWHP +S FA+ GAD+QI WDLAVERD E
Sbjct: 333 KVWDLRQFKSGSPVATFKQHVAPVTSVEWHPQDSGVFAASGADNQITQWDLAVERDPEAG 392
Query: 451 QREAE--LKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTIS 501
E + L DLP QLLF+H G+ ++KELHWHPQ PG ++STA SGF +FRTIS
Sbjct: 393 DAETDPGLADLPQQLLFVHQGETDLKELHWHPQCPGVLVSTALSGFTVFRTIS 445
Score = 314 (115.6 bits), Expect = 1.0e-63, Sum P(3) = 1.0e-63
Identities = 72/189 (38%), Positives = 100/189 (52%)
Query: 168 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAE 227
P+F+FSGH+ EGFA+DWS PG L TGDC++NIH+WTP + G+W VDQ+P GHT S E
Sbjct: 206 PIFAFSGHMGEGFALDWSPRVPGRLLTGDCQKNIHLWTPTDGGSWHVDQRPFVGHTRSVE 265
Query: 228 DLQWS---DLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTE 284
DLQWS D A + D ++ + K + T + H + ++WS E
Sbjct: 266 DLQWSPTEDTVFASCSADASIRIWDIRAAPSKACMLTTA-----TAHDGDVNVINWSHRE 320
Query: 285 PGVLATGDCKRNIHIWTPRE--AGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDL 342
P +L+ GD + +W R+ +G+ K V SVE W P + V A+ D
Sbjct: 321 PFLLSGGD-DGALKVWDLRQFKSGSPVATFKQHVAPVTSVE---WHPQDSGVFAASGADN 376
Query: 343 SIRIWDTRV 351
I WD V
Sbjct: 377 QITQWDLAV 385
Score = 279 (103.3 bits), Expect = 3.5e-43, Sum P(2) = 3.5e-43
Identities = 54/120 (45%), Positives = 72/120 (60%)
Query: 575 KDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEH 634
+ P + + H G INRVR G +AGVW E G+V ++ L+ LQ VDDP LA
Sbjct: 137 RKPQLELAMVPHYGGINRVRVSWLGEEPVAGVWSEKGQVEVFALRRLLQVVDDPQALATF 196
Query: 635 NKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSV 694
+ P+F+FSGH+ EGFA+DWS PG L TGDC++NIH+WTP + G+W V
Sbjct: 197 LRDEQTR----MKPIFAFSGHMGEGFALDWSPRVPGRLLTGDCQKNIHLWTPTDGGSWHV 252
Score = 248 (92.4 bits), Expect = 4.8e-114, Sum P(2) = 4.8e-114
Identities = 49/84 (58%), Positives = 60/84 (71%)
Query: 52 KVYLPGT--PLDKGESLVYDPSAYVMLHEAQTGAPCLSFDIIKDELGDERTAYPQTLYAV 109
+VYLPG PL +GE LV D AYV+ H AQTGAPCLSFDI++D LGD RT P TLY
Sbjct: 31 QVYLPGRGPPLREGEELVMDEEAYVLYHRAQTGAPCLSFDIVRDHLGDNRTELPLTLYLC 90
Query: 110 AGTQSKKFNFNRLIVMKMSNLTST 133
AGTQ++ NRL++++M NL T
Sbjct: 91 AGTQAESSQSNRLMMLRMHNLHGT 114
Score = 235 (87.8 bits), Expect = 3.7e-38, Sum P(3) = 3.7e-38
Identities = 41/61 (67%), Positives = 47/61 (77%)
Query: 702 GVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNR 761
G L TGDC++NIH+WTP + G+W VDQ+P VGHT SVEDLQWSP E V ASCS D S R
Sbjct: 228 GRLLTGDCQKNIHLWTPTDGGSWHVDQRPFVGHTRSVEDLQWSPTEDTVFASCSADASIR 287
Query: 762 I 762
I
Sbjct: 288 I 288
Score = 183 (69.5 bits), Expect = 1.0e-63, Sum P(3) = 1.0e-63
Identities = 30/47 (63%), Positives = 40/47 (85%)
Query: 500 ISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISM 546
++DLP QLLF+H G+ ++KELHWHPQ PG ++STA SGF +FRTIS+
Sbjct: 400 LADLPQQLLFVHQGETDLKELHWHPQCPGVLVSTALSGFTVFRTISV 446
Score = 100 (40.3 bits), Expect = 6.6e-24, Sum P(2) = 6.6e-24
Identities = 42/179 (23%), Positives = 72/179 (40%)
Query: 363 NAHTSDVNVISWNRTEP-LIVSGGDDGCIHVWDLRRFKKGS---SVATFKHHTAPVTTVE 418
+ H + + W+ P +++G IH+W GS F HT V ++
Sbjct: 211 SGHMGEGFALDWSPRVPGRLLTGDCQKNIHLWTPT--DGGSWHVDQRPFVGHTRSVEDLQ 268
Query: 419 WHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHW 478
W PTE + FAS AD I +WD+ R A K H G ++ ++W
Sbjct: 269 WSPTEDTVFASCSADASIRIWDI----------RAAPSKACMLTTATAHDG--DVNVINW 316
Query: 479 HPQLPGTIISTANSG----FNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIIST 533
+ P ++S + G +++ + S P H+ + + WHPQ G ++
Sbjct: 317 SHREP-FLLSGGDDGALKVWDLRQFKSGSPVATFKQHVAP--VTSVEWHPQDSGVFAAS 372
Score = 73 (30.8 bits), Expect = 2.2e-21, Sum P(3) = 2.2e-21
Identities = 34/124 (27%), Positives = 47/124 (37%)
Query: 652 FSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSVYLYTNRFGVLATGDCKR 711
F GH + WS TE V A+ +I IW R A + + L T GD
Sbjct: 257 FVGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPSKACMLTT---ATAHDGDV-- 311
Query: 712 NIHIWTPREA--------GA---WQVDQ----KPLVG---HTNSVEDLQWSPGEKRVLAS 753
N+ W+ RE GA W + Q P+ H V ++W P + V A+
Sbjct: 312 NVINWSHREPFLLSGGDDGALKVWDLRQFKSGSPVATFKQHVAPVTSVEWHPQDSGVFAA 371
Query: 754 CSVD 757
D
Sbjct: 372 SGAD 375
Score = 49 (22.3 bits), Expect = 4.8e-93, Sum P(2) = 4.8e-93
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 1 MNSVHLNSCPALEASNDIVDNDSDEDMEQ 29
M+++H P E S+D + D +ED E+
Sbjct: 108 MHNLHGTKPPPPEGSDDEEEEDDEEDEEE 136
Score = 49 (22.3 bits), Expect = 9.9e-20, Sum P(4) = 9.9e-20
Identities = 9/37 (24%), Positives = 16/37 (43%)
Query: 648 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIW 684
P+ +F H+ +++W + GV A I W
Sbjct: 345 PVATFKQHVAPVTSVEWHPQDSGVFAASGADNQITQW 381
Score = 42 (19.8 bits), Expect = 9.9e-20, Sum P(4) = 9.9e-20
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 586 HRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLK 619
H G +N + L+G G+ G + +WDL+
Sbjct: 307 HDGDVNVINWSHREPFLLSG--GDDGALKVWDLR 338
Score = 41 (19.5 bits), Expect = 3.7e-38, Sum P(3) = 3.7e-38
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 372 ISWNRTEPLIVSGGDDGCIHVWDLRR 397
+SW EP+ + G + V+ LRR
Sbjct: 157 VSWLGEEPVAGVWSEKGQVEVFALRR 182
>MGI|MGI:2141989 [details] [associations]
symbol:Grwd1 "glutamate-rich WD repeat containing 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:2141989 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 EMBL:AC149053 CTD:83743
GeneTree:ENSGT00550000075124 HOGENOM:HOG000036730
HOVERGEN:HBG051847 KO:K14848 OMA:NRLMMLR EMBL:AB001539
EMBL:CH466603 EMBL:BC008121 IPI:IPI00123005 RefSeq:NP_700468.2
UniGene:Mm.274847 ProteinModelPortal:Q810D6 STRING:Q810D6
PhosphoSite:Q810D6 PaxDb:Q810D6 PRIDE:Q810D6
Ensembl:ENSMUST00000107723 Ensembl:ENSMUST00000131384 GeneID:101612
KEGG:mmu:101612 InParanoid:Q810D6 NextBio:355042 CleanEx:MM_GRWD1
Genevestigator:Q810D6 GermOnline:ENSMUSG00000053801 Uniprot:Q810D6
Length = 446
Score = 898 (321.2 bits), Expect = 6.1e-114, Sum P(2) = 6.1e-114
Identities = 169/293 (57%), Positives = 207/293 (70%)
Query: 211 AWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSG 270
+W + ++P+ G + ++ L+ LQ VDDP LA R + I P+FSF+G
Sbjct: 158 SW-LGEEPVAGVWSEKGQVEVFALRRLLQVVDDPQALAIF--LRDEQARIK--PIFSFAG 212
Query: 271 HLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPG 330
H+ EGFA+DWS PG L TGDC++N+H+WTP E G+W VDQ+P VGHT SVEDLQWSP
Sbjct: 213 HMGEGFALDWSPRVPGRLLTGDCQKNVHLWTPTEGGSWNVDQRPFVGHTRSVEDLQWSPT 272
Query: 331 EKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCI 390
E V ASCS D SIRIWD R K+CMLT AH DVNVISW+R EP ++SGGDDG +
Sbjct: 273 EDTVFASCSADASIRIWDIRAAPGKACMLTTATAHDGDVNVISWSRREPFLLSGGDDGAL 332
Query: 391 HVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIE 450
VWDLR+FK GS VATFK H APVT+VEWHP +S FA+ GAD+QI WDLAVERD E
Sbjct: 333 KVWDLRQFKSGSPVATFKQHMAPVTSVEWHPQDSGVFAASGADNQITQWDLAVERDPESG 392
Query: 451 QREAE--LKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTIS 501
+ E + L LP QLLF+H G+ ++KELHWHPQ PG +ISTA SGF +FRTIS
Sbjct: 393 ETETDPGLAALPQQLLFVHQGETDLKELHWHPQCPGVLISTALSGFTVFRTIS 445
Score = 319 (117.4 bits), Expect = 7.0e-64, Sum P(3) = 7.0e-64
Identities = 71/189 (37%), Positives = 100/189 (52%)
Query: 168 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAE 227
P+FSF+GH+ EGFA+DWS PG L TGDC++N+H+WTP E G+W VDQ+P GHT S E
Sbjct: 206 PIFSFAGHMGEGFALDWSPRVPGRLLTGDCQKNVHLWTPTEGGSWNVDQRPFVGHTRSVE 265
Query: 228 DLQWS---DLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTE 284
DLQWS D A + D ++ + GK + T + H + + WS E
Sbjct: 266 DLQWSPTEDTVFASCSADASIRIWDIRAAPGKACMLTTA-----TAHDGDVNVISWSRRE 320
Query: 285 PGVLATGDCKRNIHIWTPRE--AGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDL 342
P +L+ GD + +W R+ +G+ K H V ++W P + V A+ D
Sbjct: 321 PFLLSGGD-DGALKVWDLRQFKSGSPVATFKQ---HMAPVTSVEWHPQDSGVFAASGADN 376
Query: 343 SIRIWDTRV 351
I WD V
Sbjct: 377 QITQWDLAV 385
Score = 289 (106.8 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 71/185 (38%), Positives = 92/185 (49%)
Query: 511 HLGQKEIKELHWHPQL-PGTIISTANSGFNIFRTISMSNLTSTXXXXXXXXXXXXXXXXX 569
HLG EL L GT +A S N + M NL T
Sbjct: 75 HLGDNRT-ELPLSLYLCAGTQAESAQS--NRLMMLRMHNLHGTRPSPSEGSDDDEEDEDE 131
Query: 570 XXXXRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPF 629
+ P + + H G INRVR G +AGVW E G+V ++ L+ LQ VDDP
Sbjct: 132 EDEEEQKPQLELAMVPHYGGINRVRVSWLGEEPVAGVWSEKGQVEVFALRRLLQVVDDPQ 191
Query: 630 QLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREA 689
LA R + I P+FSF+GH+ EGFA+DWS PG L TGDC++N+H+WTP E
Sbjct: 192 ALAIF--LRDEQARIK--PIFSFAGHMGEGFALDWSPRVPGRLLTGDCQKNVHLWTPTEG 247
Query: 690 GAWSV 694
G+W+V
Sbjct: 248 GSWNV 252
Score = 246 (91.7 bits), Expect = 6.1e-114, Sum P(2) = 6.1e-114
Identities = 48/84 (57%), Positives = 60/84 (71%)
Query: 52 KVYLPGT--PLDKGESLVYDPSAYVMLHEAQTGAPCLSFDIIKDELGDERTAYPQTLYAV 109
+VYLPG PL +GE LV D AYV+ H AQTGAPCLSFDI++D LGD RT P +LY
Sbjct: 31 QVYLPGRGPPLSEGEELVMDEEAYVLYHRAQTGAPCLSFDIVRDHLGDNRTELPLSLYLC 90
Query: 110 AGTQSKKFNFNRLIVMKMSNLTST 133
AGTQ++ NRL++++M NL T
Sbjct: 91 AGTQAESAQSNRLMMLRMHNLHGT 114
Score = 237 (88.5 bits), Expect = 4.1e-38, Sum P(3) = 4.1e-38
Identities = 41/61 (67%), Positives = 47/61 (77%)
Query: 702 GVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNR 761
G L TGDC++N+H+WTP E G+W VDQ+P VGHT SVEDLQWSP E V ASCS D S R
Sbjct: 228 GRLLTGDCQKNVHLWTPTEGGSWNVDQRPFVGHTRSVEDLQWSPTEDTVFASCSADASIR 287
Query: 762 I 762
I
Sbjct: 288 I 288
Score = 176 (67.0 bits), Expect = 7.0e-64, Sum P(3) = 7.0e-64
Identities = 30/47 (63%), Positives = 39/47 (82%)
Query: 500 ISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISM 546
++ LP QLLF+H G+ ++KELHWHPQ PG +ISTA SGF +FRTIS+
Sbjct: 400 LAALPQQLLFVHQGETDLKELHWHPQCPGVLISTALSGFTVFRTISV 446
Score = 97 (39.2 bits), Expect = 2.3e-23, Sum P(2) = 2.3e-23
Identities = 39/175 (22%), Positives = 69/175 (39%)
Query: 365 HTSDVNVISWNRTEP-LIVSGGDDGCIHVWDLRRFKKGS-SVATFKHHTAPVTTVEWHPT 422
H + + W+ P +++G +H+W + F HT V ++W PT
Sbjct: 213 HMGEGFALDWSPRVPGRLLTGDCQKNVHLWTPTEGGSWNVDQRPFVGHTRSVEDLQWSPT 272
Query: 423 ESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQL 482
E + FAS AD I +WD+ R A K H G ++ + W +
Sbjct: 273 EDTVFASCSADASIRIWDI----------RAAPGKACMLTTATAHDG--DVNVISWSRRE 320
Query: 483 PGTIISTANSG----FNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIIST 533
P ++S + G +++ + S P H+ + + WHPQ G ++
Sbjct: 321 P-FLLSGGDDGALKVWDLRQFKSGSPVATFKQHMAP--VTSVEWHPQDSGVFAAS 372
Score = 72 (30.4 bits), Expect = 4.9e-21, Sum P(3) = 4.9e-21
Identities = 34/124 (27%), Positives = 46/124 (37%)
Query: 652 FSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSVYLYTNRFGVLATGDCKR 711
F GH + WS TE V A+ +I IW R A + L T GD
Sbjct: 257 FVGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPGKACMLTT---ATAHDGDV-- 311
Query: 712 NIHIWTPREA--------GA---WQVDQ----KPLVG---HTNSVEDLQWSPGEKRVLAS 753
N+ W+ RE GA W + Q P+ H V ++W P + V A+
Sbjct: 312 NVISWSRREPFLLSGGDDGALKVWDLRQFKSGSPVATFKQHMAPVTSVEWHPQDSGVFAA 371
Query: 754 CSVD 757
D
Sbjct: 372 SGAD 375
Score = 50 (22.7 bits), Expect = 1.4e-19, Sum P(4) = 1.4e-19
Identities = 9/37 (24%), Positives = 16/37 (43%)
Query: 648 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIW 684
P+ +F H+ +++W + GV A I W
Sbjct: 345 PVATFKQHMAPVTSVEWHPQDSGVFAASGADNQITQW 381
Score = 42 (19.8 bits), Expect = 1.4e-19, Sum P(4) = 1.4e-19
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 586 HRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLK 619
H G +N + + L+G G+ G + +WDL+
Sbjct: 307 HDGDVNVISWSRREPFLLSG--GDDGALKVWDLR 338
Score = 41 (19.5 bits), Expect = 4.1e-38, Sum P(3) = 4.1e-38
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 372 ISWNRTEPLIVSGGDDGCIHVWDLRR 397
+SW EP+ + G + V+ LRR
Sbjct: 157 VSWLGEEPVAGVWSEKGQVEVFALRR 182
Score = 38 (18.4 bits), Expect = 5.5e-92, Sum P(2) = 5.5e-92
Identities = 8/29 (27%), Positives = 17/29 (58%)
Query: 1 MNSVHLNSCPALEASNDIVDNDSDEDMEQ 29
M+++H E S+D +++ +ED E+
Sbjct: 108 MHNLHGTRPSPSEGSDDDEEDEDEEDEEE 136
>UNIPROTKB|E2RBY0 [details] [associations]
symbol:GRWD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
CTD:83743 GeneTree:ENSGT00550000075124 KO:K14848 OMA:NRLMMLR
EMBL:AAEX03000823 RefSeq:XP_854878.1 ProteinModelPortal:E2RBY0
Ensembl:ENSCAFT00000006420 GeneID:612058 KEGG:cfa:612058
NextBio:20897592 Uniprot:E2RBY0
Length = 440
Score = 889 (318.0 bits), Expect = 5.5e-113, Sum P(2) = 5.5e-113
Identities = 162/293 (55%), Positives = 208/293 (70%)
Query: 211 AWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSG 270
+W + ++P+ G + ++ L+ LQ VDDP LA R + + P+F+F+G
Sbjct: 152 SW-LGEEPVAGIWSEKGQVEVFALRRLLQVVDDPQALATF--LRDEQARVK--PIFTFAG 206
Query: 271 HLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPG 330
H+ EGFA+DWS G L TGDC++NIH+WTP + G+W VDQ+P +GHT SVEDLQWSP
Sbjct: 207 HMGEGFALDWSPRVSGRLLTGDCQKNIHLWTPTDGGSWHVDQRPFMGHTRSVEDLQWSPT 266
Query: 331 EKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCI 390
E V ASCS D SIRIWD R +K+CMLT +AH DVNVI+W+R EP ++SGGDDG +
Sbjct: 267 EDTVFASCSADASIRIWDIRAAPSKACMLTTTSAHDGDVNVINWSRREPFLLSGGDDGAL 326
Query: 391 HVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIE 450
+WDLR+FK GS VATFK H AP+T+VEWHP +S FA+ GAD+QI WDLAVERD E
Sbjct: 327 KIWDLRQFKSGSPVATFKQHVAPITSVEWHPQDSGVFAASGADNQITQWDLAVERDPEAG 386
Query: 451 QREAE--LKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTIS 501
E + L DLP QLLF+H G+ ++KELHWHPQ PG ++STA SGF +FRTIS
Sbjct: 387 DTETDPGLADLPQQLLFVHQGETDLKELHWHPQCPGVLVSTALSGFTVFRTIS 439
Score = 306 (112.8 bits), Expect = 2.4e-62, Sum P(3) = 2.4e-62
Identities = 72/189 (38%), Positives = 99/189 (52%)
Query: 168 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAE 227
P+F+F+GH+ EGFA+DWS G L TGDC++NIH+WTP + G+W VDQ+P GHT S E
Sbjct: 200 PIFTFAGHMGEGFALDWSPRVSGRLLTGDCQKNIHLWTPTDGGSWHVDQRPFMGHTRSVE 259
Query: 228 DLQWS---DLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTE 284
DLQWS D A + D ++ + K + T S H + ++WS E
Sbjct: 260 DLQWSPTEDTVFASCSADASIRIWDIRAAPSKACMLTTT-----SAHDGDVNVINWSRRE 314
Query: 285 PGVLATGDCKRNIHIWTPRE--AGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDL 342
P +L+ GD + IW R+ +G+ K V SVE W P + V A+ D
Sbjct: 315 PFLLSGGD-DGALKIWDLRQFKSGSPVATFKQHVAPITSVE---WHPQDSGVFAASGADN 370
Query: 343 SIRIWDTRV 351
I WD V
Sbjct: 371 QITQWDLAV 379
Score = 269 (99.8 bits), Expect = 8.6e-42, Sum P(2) = 8.6e-42
Identities = 52/120 (43%), Positives = 73/120 (60%)
Query: 575 KDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEH 634
+ P + + H G INRVR G +AG+W E G+V ++ L+ LQ VDDP LA
Sbjct: 131 RKPQLELAMVPHYGGINRVRVSWLGEEPVAGIWSEKGQVEVFALRRLLQVVDDPQALATF 190
Query: 635 NKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSV 694
R + + P+F+F+GH+ EGFA+DWS G L TGDC++NIH+WTP + G+W V
Sbjct: 191 --LRDEQARVK--PIFTFAGHMGEGFALDWSPRVSGRLLTGDCQKNIHLWTPTDGGSWHV 246
Score = 246 (91.7 bits), Expect = 5.5e-113, Sum P(2) = 5.5e-113
Identities = 49/81 (60%), Positives = 59/81 (72%)
Query: 52 KVYLPGT--PLDKGESLVYDPSAYVMLHEAQTGAPCLSFDIIKDELGDERTAYPQTLYAV 109
+VYLPG PL +GE LV D AYV+ H AQTGAPCLSFDII+D LGD RT P TLY
Sbjct: 26 QVYLPGRGPPLREGEELVMDEEAYVLYHRAQTGAPCLSFDIIRDHLGDNRTELPLTLYLC 85
Query: 110 AGTQSKKFNFNRLIVMKMSNL 130
AGTQ++ NRL++++M NL
Sbjct: 86 AGTQAESAQSNRLMMLRMHNL 106
Score = 232 (86.7 bits), Expect = 1.1e-37, Sum P(3) = 1.1e-37
Identities = 40/61 (65%), Positives = 47/61 (77%)
Query: 702 GVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNR 761
G L TGDC++NIH+WTP + G+W VDQ+P +GHT SVEDLQWSP E V ASCS D S R
Sbjct: 222 GRLLTGDCQKNIHLWTPTDGGSWHVDQRPFMGHTRSVEDLQWSPTEDTVFASCSADASIR 281
Query: 762 I 762
I
Sbjct: 282 I 282
Score = 183 (69.5 bits), Expect = 2.4e-62, Sum P(3) = 2.4e-62
Identities = 30/47 (63%), Positives = 40/47 (85%)
Query: 500 ISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISM 546
++DLP QLLF+H G+ ++KELHWHPQ PG ++STA SGF +FRTIS+
Sbjct: 394 LADLPQQLLFVHQGETDLKELHWHPQCPGVLVSTALSGFTVFRTISV 440
Score = 102 (41.0 bits), Expect = 6.3e-24, Sum P(2) = 6.3e-24
Identities = 43/177 (24%), Positives = 71/177 (40%)
Query: 365 HTSDVNVISWN-RTEPLIVSGGDDGCIHVWDLRRFKKGS---SVATFKHHTAPVTTVEWH 420
H + + W+ R +++G IH+W GS F HT V ++W
Sbjct: 207 HMGEGFALDWSPRVSGRLLTGDCQKNIHLWTPT--DGGSWHVDQRPFMGHTRSVEDLQWS 264
Query: 421 PTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHP 480
PTE + FAS AD I +WD+ R A K H G ++ ++W
Sbjct: 265 PTEDTVFASCSADASIRIWDI----------RAAPSKACMLTTTSAHDG--DVNVINWSR 312
Query: 481 QLPGTIISTANSG----FNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIIST 533
+ P ++S + G +++ + S P H+ I + WHPQ G ++
Sbjct: 313 REP-FLLSGGDDGALKIWDLRQFKSGSPVATFKQHVAP--ITSVEWHPQDSGVFAAS 366
Score = 72 (30.4 bits), Expect = 4.2e-21, Sum P(3) = 4.2e-21
Identities = 33/124 (26%), Positives = 47/124 (37%)
Query: 652 FSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSVYLYTNRFGVLATGDCKR 711
F GH + WS TE V A+ +I IW R A + + L T GD
Sbjct: 251 FMGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPSKACMLTTTS---AHDGDV-- 305
Query: 712 NIHIWTPREA--------GA---WQVDQ----KPLVG---HTNSVEDLQWSPGEKRVLAS 753
N+ W+ RE GA W + Q P+ H + ++W P + V A+
Sbjct: 306 NVINWSRREPFLLSGGDDGALKIWDLRQFKSGSPVATFKQHVAPITSVEWHPQDSGVFAA 365
Query: 754 CSVD 757
D
Sbjct: 366 SGAD 369
Score = 48 (22.0 bits), Expect = 1.1e-19, Sum P(4) = 1.1e-19
Identities = 9/37 (24%), Positives = 16/37 (43%)
Query: 648 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIW 684
P+ +F H+ +++W + GV A I W
Sbjct: 339 PVATFKQHVAPITSVEWHPQDSGVFAASGADNQITQW 375
Score = 48 (22.0 bits), Expect = 1.2e-18, Sum P(3) = 1.2e-18
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 649 LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPRE 688
L + S H + ++WS EP +L+ GD + IW R+
Sbjct: 295 LTTTSAHDGDVNVINWSRREPFLLSGGD-DGALKIWDLRQ 333
Score = 44 (20.5 bits), Expect = 1.1e-19, Sum P(4) = 1.1e-19
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 586 HRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLK 619
H G +N + + L+G G+ G + IWDL+
Sbjct: 301 HDGDVNVINWSRREPFLLSG--GDDGALKIWDLR 332
Score = 41 (19.5 bits), Expect = 1.1e-37, Sum P(3) = 1.1e-37
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 372 ISWNRTEPLIVSGGDDGCIHVWDLRR 397
+SW EP+ + G + V+ LRR
Sbjct: 151 VSWLGEEPVAGIWSEKGQVEVFALRR 176
>RGD|1310649 [details] [associations]
symbol:Grwd1 "glutamate-rich WD repeat containing 1"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310649 GO:GO:0005737
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 CTD:83743 HOGENOM:HOG000036730
HOVERGEN:HBG051847 KO:K14848 OrthoDB:EOG4CG084 EMBL:BC083883
IPI:IPI00367307 RefSeq:NP_001012067.1 UniGene:Rn.33523
ProteinModelPortal:Q5XI13 STRING:Q5XI13 PRIDE:Q5XI13 GeneID:308592
KEGG:rno:308592 UCSC:RGD:1310649 NextBio:659230 ArrayExpress:Q5XI13
Genevestigator:Q5XI13 GermOnline:ENSRNOG00000021058 Uniprot:Q5XI13
Length = 445
Score = 893 (319.4 bits), Expect = 4.3e-92, Sum P(2) = 4.3e-92
Identities = 168/293 (57%), Positives = 207/293 (70%)
Query: 211 AWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSG 270
+W + ++P+ G + ++ L+ LQ VDDP LA R + + P+FSF+G
Sbjct: 157 SW-LGEEPVAGVWSEKGQVEVFALRRLLQVVDDPQALAIF--LRDEQARVK--PIFSFAG 211
Query: 271 HLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPG 330
H+ EGFA+DWS PG L TGDC++NIH+WTP + G+W VDQ+P VGHT SVEDLQWSP
Sbjct: 212 HMGEGFALDWSPRVPGRLLTGDCQKNIHLWTPTDGGSWNVDQRPFVGHTRSVEDLQWSPT 271
Query: 331 EKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCI 390
E V ASCS D SIRIWD R K+CMLT AH DVNVISW+R EP ++SGGDDG +
Sbjct: 272 EDTVFASCSADASIRIWDIRAAPGKACMLTTAAAHDGDVNVISWSRREPFLLSGGDDGTL 331
Query: 391 HVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIE 450
VWDLR+FK GS VATFK H APVT+VEWHP +S FA+ GAD+QI WDLAVERD E
Sbjct: 332 KVWDLRQFKSGSPVATFKQHVAPVTSVEWHPQDSGVFAASGADNQITQWDLAVERDPESG 391
Query: 451 QREAE--LKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTIS 501
+ E + L LP QLLF+H G+ ++KELHWHPQ PG +ISTA SGF +FRTIS
Sbjct: 392 ETETDPGLAALPQQLLFVHQGETDLKELHWHPQCPGVLISTALSGFTVFRTIS 444
Score = 332 (121.9 bits), Expect = 5.5e-45, Sum P(2) = 5.5e-45
Identities = 109/361 (30%), Positives = 155/361 (42%)
Query: 52 KVYLPGT--PLDKGESLVYDPSAYVMLHEAQTGAPCLSFDIIKDELGDERTAYPQTLYAV 109
+VYLPG PL +GE LV D AYV+ H AQTGAPCLSFDI++D LGD RT P +LY
Sbjct: 31 QVYLPGRGPPLGEGEELVMDEEAYVLYHRAQTGAPCLSFDIVRDHLGDNRTELPLSLYLC 90
Query: 110 AGTQSKKFNFNRLIVMKMSNLTSTXXXXXXXXXXXXXXPFQLAEHNKKRGKGPGIP---- 165
AGTQ++ NRL++++M NL T + E K + + +P
Sbjct: 91 AGTQAESAQSNRLMMLRMHNLHGTRPPPSEGSDDEDDEDEEDEEERKPQLELAMVPHYGG 150
Query: 166 -TPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWT-PREAGAWQVDQ----KPL 219
S+ G E A WS E G + +R + + P+ + D+ KP+
Sbjct: 151 INRVRVSWLGE--EPVAGVWS--EKGQVEVFALRRLLQVVDDPQALAIFLRDEQARVKPI 206
Query: 220 ---GGHTNSAEDLQWSD-LKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEG 275
GH L WS + L T D + G + P F GH
Sbjct: 207 FSFAGHMGEGFALDWSPRVPGRLLTGDCQKNIHLWTPTDGGSWNVDQRP---FVGHTRSV 263
Query: 276 FAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVL 335
+ WS TE V A+ +I IW R A H V + WS E +L
Sbjct: 264 EDLQWSPTEDTVFASCSADASIRIWDIRAAPGKACMLTTAAAHDGDVNVISWSRREPFLL 323
Query: 336 ASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEP-LIVSGGDDGCIHVWD 394
+ D ++++WD R + S + T H + V + W+ + + + G D I WD
Sbjct: 324 SGGD-DGTLKVWDLRQFKSGSPVATFKQ-HVAPVTSVEWHPQDSGVFAASGADNQITQWD 381
Query: 395 L 395
L
Sbjct: 382 L 382
Score = 321 (118.1 bits), Expect = 1.8e-43, Sum P(3) = 1.8e-43
Identities = 73/189 (38%), Positives = 100/189 (52%)
Query: 168 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAE 227
P+FSF+GH+ EGFA+DWS PG L TGDC++NIH+WTP + G+W VDQ+P GHT S E
Sbjct: 205 PIFSFAGHMGEGFALDWSPRVPGRLLTGDCQKNIHLWTPTDGGSWNVDQRPFVGHTRSVE 264
Query: 228 DLQWS---DLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTE 284
DLQWS D A + D ++ + GK + T + H + + WS E
Sbjct: 265 DLQWSPTEDTVFASCSADASIRIWDIRAAPGKACMLTTA-----AAHDGDVNVISWSRRE 319
Query: 285 PGVLATGDCKRNIHIWTPRE--AGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDL 342
P +L+ GD + +W R+ +G+ K V SVE W P + V A+ D
Sbjct: 320 PFLLSGGD-DGTLKVWDLRQFKSGSPVATFKQHVAPVTSVE---WHPQDSGVFAASGADN 375
Query: 343 SIRIWDTRV 351
I WD V
Sbjct: 376 QITQWDLAV 384
Score = 285 (105.4 bits), Expect = 3.0e-22, P = 3.0e-22
Identities = 72/185 (38%), Positives = 93/185 (50%)
Query: 511 HLGQKEIKELHWHPQL-PGTIISTANSGFNIFRTISMSNLTSTXXXXXXXXXXXXXXXXX 569
HLG EL L GT +A S N + M NL T
Sbjct: 75 HLGDNRT-ELPLSLYLCAGTQAESAQS--NRLMMLRMHNLHGTRPPPSEGSDDEDDEDEE 131
Query: 570 XXXXRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPF 629
RK P + + H G INRVR G +AGVW E G+V ++ L+ LQ VDDP
Sbjct: 132 DEEERK-PQLELAMVPHYGGINRVRVSWLGEEPVAGVWSEKGQVEVFALRRLLQVVDDPQ 190
Query: 630 QLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREA 689
LA R + + P+FSF+GH+ EGFA+DWS PG L TGDC++NIH+WTP +
Sbjct: 191 ALAIF--LRDEQARVK--PIFSFAGHMGEGFALDWSPRVPGRLLTGDCQKNIHLWTPTDG 246
Query: 690 GAWSV 694
G+W+V
Sbjct: 247 GSWNV 251
Score = 235 (87.8 bits), Expect = 7.6e-17, Sum P(3) = 7.6e-17
Identities = 41/61 (67%), Positives = 47/61 (77%)
Query: 702 GVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNR 761
G L TGDC++NIH+WTP + G+W VDQ+P VGHT SVEDLQWSP E V ASCS D S R
Sbjct: 227 GRLLTGDCQKNIHLWTPTDGGSWNVDQRPFVGHTRSVEDLQWSPTEDTVFASCSADASIR 286
Query: 762 I 762
I
Sbjct: 287 I 287
Score = 176 (67.0 bits), Expect = 5.5e-45, Sum P(2) = 5.5e-45
Identities = 30/47 (63%), Positives = 39/47 (82%)
Query: 500 ISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISM 546
++ LP QLLF+H G+ ++KELHWHPQ PG +ISTA SGF +FRTIS+
Sbjct: 399 LAALPQQLLFVHQGETDLKELHWHPQCPGVLISTALSGFTVFRTISV 445
Score = 44 (20.5 bits), Expect = 4.3e-92, Sum P(2) = 4.3e-92
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 1 MNSVHLNSCPALEASNDIVDNDSDEDMEQ 29
M+++H P E S+D D++ +ED E+
Sbjct: 108 MHNLHGTRPPPSEGSDD-EDDEDEEDEEE 135
Score = 41 (19.5 bits), Expect = 7.6e-17, Sum P(3) = 7.6e-17
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 372 ISWNRTEPLIVSGGDDGCIHVWDLRR 397
+SW EP+ + G + V+ LRR
Sbjct: 156 VSWLGEEPVAGVWSEKGQVEVFALRR 181
>UNIPROTKB|Q9BQ67 [details] [associations]
symbol:GRWD1 "Glutamate-rich WD repeat-containing protein
1" species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
CTD:83743 HOGENOM:HOG000036730 HOVERGEN:HBG051847 KO:K14848
OMA:NRLMMLR OrthoDB:EOG4CG084 EMBL:AF337808 EMBL:BC002440
EMBL:AB075822 IPI:IPI00027831 RefSeq:NP_113673.3 UniGene:Hs.400625
ProteinModelPortal:Q9BQ67 SMR:Q9BQ67 IntAct:Q9BQ67
MINT:MINT-1148872 STRING:Q9BQ67 PhosphoSite:Q9BQ67 DMDM:18202731
SWISS-2DPAGE:Q9BQ67 PaxDb:Q9BQ67 PeptideAtlas:Q9BQ67 PRIDE:Q9BQ67
DNASU:83743 Ensembl:ENST00000253237 GeneID:83743 KEGG:hsa:83743
UCSC:uc002pjd.2 GeneCards:GC19P048949 H-InvDB:HIX0080107
HGNC:HGNC:21270 HPA:HPA042643 MIM:610597 neXtProt:NX_Q9BQ67
PharmGKB:PA134897548 InParanoid:Q9BQ67 PhylomeDB:Q9BQ67
GenomeRNAi:83743 NextBio:72761 ArrayExpress:Q9BQ67 Bgee:Q9BQ67
CleanEx:HS_GRWD1 Genevestigator:Q9BQ67 GermOnline:ENSG00000105447
Uniprot:Q9BQ67
Length = 446
Score = 893 (319.4 bits), Expect = 7.0e-92, Sum P(2) = 7.0e-92
Identities = 166/293 (56%), Positives = 205/293 (69%)
Query: 211 AWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSG 270
+W + ++P+ G + ++ L+ LQ V++P LA + P+FSF+G
Sbjct: 158 SW-LGEEPVAGVWSEKGQVEVFALRRLLQVVEEPQALAAFLRDEQA----QMKPIFSFAG 212
Query: 271 HLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPG 330
H+ EGFA+DWS G L TGDC++NIH+WTP + G+W VDQ+P VGHT SVEDLQWSP
Sbjct: 213 HMGEGFALDWSPRVTGRLLTGDCQKNIHLWTPTDGGSWHVDQRPFVGHTRSVEDLQWSPT 272
Query: 331 EKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCI 390
E V ASCS D SIRIWD R +K+CMLT AH DVNVISW+R EP ++SGGDDG +
Sbjct: 273 ENTVFASCSADASIRIWDIRAAPSKACMLTTATAHDGDVNVISWSRREPFLLSGGDDGAL 332
Query: 391 HVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIE 450
+WDLR+FK GS VATFK H APVT+VEWHP +S FA+ GAD QI WDLAVERD E
Sbjct: 333 KIWDLRQFKSGSPVATFKQHVAPVTSVEWHPQDSGVFAASGADHQITQWDLAVERDPEAG 392
Query: 451 QREAE--LKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTIS 501
EA+ L DLP QLLF+H G+ E+KELHWHPQ PG ++STA SGF IFRTIS
Sbjct: 393 DVEADPGLADLPQQLLFVHQGETELKELHWHPQCPGLLVSTALSGFTIFRTIS 445
Score = 339 (124.4 bits), Expect = 8.5e-47, Sum P(2) = 8.5e-47
Identities = 112/364 (30%), Positives = 156/364 (42%)
Query: 52 KVYLPGT--PLDKGESLVYDPSAYVMLHEAQTGAPCLSFDIIKDELGDERTAYPQTLYAV 109
+VYLPG PL +GE LV D AYV+ H AQTGAPCLSFDI++D LGD RT P TLY
Sbjct: 31 QVYLPGRGPPLREGEELVMDEEAYVLYHRAQTGAPCLSFDIVRDHLGDNRTELPLTLYLC 90
Query: 110 AGTQSKKFNFNRLIVMKMSNLTSTXXXXXXXXXXXXXXPFQLAEHNKKRGKGPGIPTPPL 169
AGTQ++ NRL++++M NL T + E +K P + +
Sbjct: 91 AGTQAESAQSNRLMMLRMHNLHGTKPPPSEGSDEEEEEEDEEDEEERK----PQLELAMV 146
Query: 170 FSFSGHLTEGFAMDWSSTEP--GVLAT-GDC-----KRNIHIWT-PREAGAW----QVDQ 216
+ G + W EP GV + G +R + + P+ A+ Q
Sbjct: 147 PHYGG--INRVRVSWLGEEPVAGVWSEKGQVEVFALRRLLQVVEEPQALAAFLRDEQAQM 204
Query: 217 KPL---GGHTNSAEDLQWSDLKTA-LQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHL 272
KP+ GH L WS T L T D + G + P F GH
Sbjct: 205 KPIFSFAGHMGEGFALDWSPRVTGRLLTGDCQKNIHLWTPTDGGSWHVDQRP---FVGHT 261
Query: 273 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEK 332
+ WS TE V A+ +I IW R A + H V + WS E
Sbjct: 262 RSVEDLQWSPTENTVFASCSADASIRIWDIRAAPSKACMLTTATAHDGDVNVISWSRREP 321
Query: 333 RVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEP-LIVSGGDDGCIH 391
+L+ D +++IWD R + S + T H + V + W+ + + + G D I
Sbjct: 322 FLLSGGD-DGALKIWDLRQFKSGSPVATFKQ-HVAPVTSVEWHPQDSGVFAASGADHQIT 379
Query: 392 VWDL 395
WDL
Sbjct: 380 QWDL 383
Score = 304 (112.1 bits), Expect = 8.9e-41, Sum P(3) = 8.9e-41
Identities = 71/189 (37%), Positives = 98/189 (51%)
Query: 168 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAE 227
P+FSF+GH+ EGFA+DWS G L TGDC++NIH+WTP + G+W VDQ+P GHT S E
Sbjct: 206 PIFSFAGHMGEGFALDWSPRVTGRLLTGDCQKNIHLWTPTDGGSWHVDQRPFVGHTRSVE 265
Query: 228 DLQWSDLKT---ALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTE 284
DLQWS + A + D ++ + K + T + H + + WS E
Sbjct: 266 DLQWSPTENTVFASCSADASIRIWDIRAAPSKACMLTTA-----TAHDGDVNVISWSRRE 320
Query: 285 PGVLATGDCKRNIHIWTPRE--AGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDL 342
P +L+ GD + IW R+ +G+ K V SVE W P + V A+ D
Sbjct: 321 PFLLSGGD-DGALKIWDLRQFKSGSPVATFKQHVAPVTSVE---WHPQDSGVFAASGADH 376
Query: 343 SIRIWDTRV 351
I WD V
Sbjct: 377 QITQWDLAV 385
Score = 267 (99.0 bits), Expect = 3.7e-20, P = 3.7e-20
Identities = 66/185 (35%), Positives = 88/185 (47%)
Query: 511 HLGQKEIKELHWHPQL-PGTIISTANSGFNIFRTISMSNLTSTXXXXXXXXXXXXXXXXX 569
HLG EL L GT +A S N + M NL T
Sbjct: 75 HLGDNRT-ELPLTLYLCAGTQAESAQS--NRLMMLRMHNLHGTKPPPSEGSDEEEEEEDE 131
Query: 570 XXXXRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPF 629
+ P + + H G INRVR G +AGVW E G+V ++ L+ LQ V++P
Sbjct: 132 EDEEERKPQLELAMVPHYGGINRVRVSWLGEEPVAGVWSEKGQVEVFALRRLLQVVEEPQ 191
Query: 630 QLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREA 689
LA + P+FSF+GH+ EGFA+DWS G L TGDC++NIH+WTP +
Sbjct: 192 ALAAFLRDEQA----QMKPIFSFAGHMGEGFALDWSPRVTGRLLTGDCQKNIHLWTPTDG 247
Query: 690 GAWSV 694
G+W V
Sbjct: 248 GSWHV 252
Score = 236 (88.1 bits), Expect = 9.6e-17, Sum P(3) = 9.6e-17
Identities = 41/61 (67%), Positives = 47/61 (77%)
Query: 702 GVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNR 761
G L TGDC++NIH+WTP + G+W VDQ+P VGHT SVEDLQWSP E V ASCS D S R
Sbjct: 228 GRLLTGDCQKNIHLWTPTDGGSWHVDQRPFVGHTRSVEDLQWSPTENTVFASCSADASIR 287
Query: 762 I 762
I
Sbjct: 288 I 288
Score = 186 (70.5 bits), Expect = 8.5e-47, Sum P(2) = 8.5e-47
Identities = 32/47 (68%), Positives = 40/47 (85%)
Query: 500 ISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISM 546
++DLP QLLF+H G+ E+KELHWHPQ PG ++STA SGF IFRTIS+
Sbjct: 400 LADLPQQLLFVHQGETELKELHWHPQCPGLLVSTALSGFTIFRTISV 446
Score = 42 (19.8 bits), Expect = 7.0e-92, Sum P(2) = 7.0e-92
Identities = 8/29 (27%), Positives = 17/29 (58%)
Query: 1 MNSVHLNSCPALEASNDIVDNDSDEDMEQ 29
M+++H P E S++ + + +ED E+
Sbjct: 108 MHNLHGTKPPPSEGSDEEEEEEDEEDEEE 136
Score = 41 (19.5 bits), Expect = 9.6e-17, Sum P(3) = 9.6e-17
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 372 ISWNRTEPLIVSGGDDGCIHVWDLRR 397
+SW EP+ + G + V+ LRR
Sbjct: 157 VSWLGEEPVAGVWSEKGQVEVFALRR 182
>ZFIN|ZDB-GENE-030131-9844 [details] [associations]
symbol:grwd1 "glutamate-rich WD repeat containing
1" species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-9844
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 GeneTree:ENSGT00550000075124
EMBL:CU459065 IPI:IPI00490298 Ensembl:ENSDART00000121998
ArrayExpress:F1QGP3 Bgee:F1QGP3 Uniprot:F1QGP3
Length = 452
Score = 838 (300.0 bits), Expect = 1.2e-83, P = 1.2e-83
Identities = 156/269 (57%), Positives = 197/269 (73%)
Query: 233 DLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGD 292
DL+ L+ V + ++ K+ + PLFSF+GH++EGFA+DWS PG + +GD
Sbjct: 191 DLRLQLEAVHNSTAMSAFIKQEKEAT-----PLFSFAGHMSEGFAIDWSPKVPGRMVSGD 245
Query: 293 CKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVI 352
CK+NIH+W P+E G W++DQ+P H+ SVEDLQWSP E V ASCSVD SIRIWD R
Sbjct: 246 CKKNIHVWEPQEGGTWKIDQRPFSSHSKSVEDLQWSPTEATVFASCSVDQSIRIWDIRA- 304
Query: 353 NTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTA 412
+ ML+ AH+SDVNVISWNRTEP I+SGGDDG + VWDLR+F+ G VA+FK H+A
Sbjct: 305 -PPNSMLSANEAHSSDVNVISWNRTEPFILSGGDDGLLKVWDLRQFQSGRPVASFKQHSA 363
Query: 413 PVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKE 472
PVT+V+W P +SS FA+ GADD I+ WDL+VE Q E ++K LP QLLF+H GQKE
Sbjct: 364 PVTSVQWSPVDSSVFAASGADDVISQWDLSVESCDMGGQAE-DVKQLPPQLLFLHQGQKE 422
Query: 473 IKELHWHPQLPGTIISTANSGFNIFRTIS 501
+KELHWHPQ+PG +ISTA SGFNIFRTIS
Sbjct: 423 VKELHWHPQIPGVLISTALSGFNIFRTIS 451
Score = 330 (121.2 bits), Expect = 2.9e-28, P = 2.9e-28
Identities = 71/196 (36%), Positives = 110/196 (56%)
Query: 168 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAE 227
PLFSF+GH++EGFA+DWS PG + +GDCK+NIH+W P+E G W++DQ+P H+ S E
Sbjct: 217 PLFSFAGHMSEGFAIDWSPKVPGRMVSGDCKKNIHVWEPQEGGTWKIDQRPFSSHSKSVE 276
Query: 228 DLQWSDLKT---ALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTE 284
DLQWS + A +VD ++ + + P P L + H ++ + W+ TE
Sbjct: 277 DLQWSPTEATVFASCSVDQSIRIWDI-----RAP--PNSMLSANEAHSSDVNVISWNRTE 329
Query: 285 PGVLATGDCKRNIHIWTPREAGAWQVDQKPLVG---HTNSVEDLQWSPGEKRVLASCSVD 341
P +L+ GD + +W R+ +Q +P+ H+ V +QWSP + V A+ D
Sbjct: 330 PFILSGGD-DGLLKVWDLRQ---FQ-SGRPVASFKQHSAPVTSVQWSPVDSSVFAASGAD 384
Query: 342 LSIRIWDTRVINTKSC 357
I WD ++ +SC
Sbjct: 385 DVISQWD---LSVESC 397
Score = 293 (108.2 bits), Expect = 3.8e-23, P = 3.8e-23
Identities = 106/362 (29%), Positives = 154/362 (42%)
Query: 52 KVYLPGT-PLDKGESLVYDPSAYVMLHEAQTGAPCLSFDIIKDELGDERTAYPQTLYAVA 110
KVY+PG PL GE L D SAY M HE QTGAPCLSFD++ D GD R +P ++ A
Sbjct: 42 KVYVPGLQPLQPGEELEMDHSAYRMYHECQTGAPCLSFDVVLDGEGDRREQFPLSMVLCA 101
Query: 111 GTQSKKFNFNRLIVMKMSNLTSTXXXXXXXXXXXXXXPFQLAEHNKKRGKGPGIPTPPLF 170
GTQ+ NRLIVM+M NL T E ++ K P + +
Sbjct: 102 GTQADTALSNRLIVMRMHNLQGTEKKKDEDKSSDEESDED--EDDEDEDKKPQLELAMMP 159
Query: 171 SFSG----HLTE-G---FAMDWSSTEPGVLATGDCKRN---IHIWTPREAGAWQVDQK-P 218
+ G +T+ G A WS E G + D + +H T A Q + P
Sbjct: 160 HYGGINRVRVTQRGEQTLAAVWS--EKGQVEIFDLRLQLEAVHNSTAMSAFIKQEKEATP 217
Query: 219 L---GGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEG 275
L GH + + WS K + V + H + +G G FS H
Sbjct: 218 LFSFAGHMSEGFAIDWSP-KVPGRMVSGDCKKNIHVWEPQEG-GTWKIDQRPFSSHSKSV 275
Query: 276 FAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVL 335
+ WS TE V A+ ++I IW R + H++ V + W+ E +L
Sbjct: 276 EDLQWSPTEATVFASCSVDQSIRIWDIRAPPNSMLSANE--AHSSDVNVISWNRTEPFIL 333
Query: 336 ASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLI--VSGGDDGCIHVW 393
+ L +++WD R + + + H++ V + W+ + + SG DD I W
Sbjct: 334 SGGDDGL-LKVWDLRQFQSGRPVASFKQ-HSAPVTSVQWSPVDSSVFAASGADD-VISQW 390
Query: 394 DL 395
DL
Sbjct: 391 DL 392
Score = 290 (107.1 bits), Expect = 8.7e-23, P = 8.7e-23
Identities = 75/239 (31%), Positives = 116/239 (48%)
Query: 317 GHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR 376
GH + + WSP + S +I +W+ + T ++H+ V + W+
Sbjct: 223 GHMSEGFAIDWSPKVPGRMVSGDCKKNIHVWEPQEGGTWKIDQRPFSSHSKSVEDLQWSP 282
Query: 377 TEPLI-VSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQ 435
TE + S D I +WD+R S ++ + H++ V + W+ TE SGG D
Sbjct: 283 TEATVFASCSVDQSIRIWDIRA-PPNSMLSANEAHSSDVNVISWNRTEPFIL-SGGDDGL 340
Query: 436 IALWDLAVERD----SEIEQREAELKDL---P-SQLLFIHLGQKEIKELHWHPQLPGTII 487
+ +WDL + + +Q A + + P +F G ++ W +
Sbjct: 341 LKVWDLRQFQSGRPVASFKQHSAPVTSVQWSPVDSSVFAASGADDVIS-QWDLS-----V 394
Query: 488 STANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISM 546
+ + G + LP QLLF+H GQKE+KELHWHPQ+PG +ISTA SGFNIFRTIS+
Sbjct: 395 ESCDMGGQA-EDVKQLPPQLLFLHQGQKEVKELHWHPQIPGVLISTALSGFNIFRTISV 452
Score = 281 (104.0 bits), Expect = 9.9e-22, P = 9.9e-22
Identities = 53/120 (44%), Positives = 74/120 (61%)
Query: 575 KDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEH 634
K P + + H G INRVR Q G TLA VW E G+V I+DL+ L+ V + ++
Sbjct: 149 KKPQLELAMMPHYGGINRVRVTQRGEQTLAAVWSEKGQVEIFDLRLQLEAVHNSTAMSAF 208
Query: 635 NKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSV 694
K+ + PLFSF+GH++EGFA+DWS PG + +GDCK+NIH+W P+E G W +
Sbjct: 209 IKQEKEAT-----PLFSFAGHMSEGFAIDWSPKVPGRMVSGDCKKNIHVWEPQEGGTWKI 263
Score = 223 (83.6 bits), Expect = 3.5e-15, P = 3.5e-15
Identities = 37/61 (60%), Positives = 47/61 (77%)
Query: 702 GVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNR 761
G + +GDCK+NIH+W P+E G W++DQ+P H+ SVEDLQWSP E V ASCSVD+S R
Sbjct: 239 GRMVSGDCKKNIHVWEPQEGGTWKIDQRPFSSHSKSVEDLQWSPTEATVFASCSVDQSIR 298
Query: 762 I 762
I
Sbjct: 299 I 299
>TAIR|locus:2050388 [details] [associations]
symbol:AT2G19540 "AT2G19540" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319 EMBL:AC005917
InterPro:IPR022052 Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000036730
KO:K14848 OMA:NRLMMLR UniGene:At.24966 EMBL:AF370506 EMBL:AY128814
IPI:IPI00526267 PIR:A84578 RefSeq:NP_179544.1
ProteinModelPortal:Q9ZUN8 SMR:Q9ZUN8 STRING:Q9ZUN8 PaxDb:Q9ZUN8
PRIDE:Q9ZUN8 EnsemblPlants:AT2G19540.1 GeneID:816473
KEGG:ath:AT2G19540 TAIR:At2g19540 InParanoid:Q9ZUN8
PhylomeDB:Q9ZUN8 ProtClustDB:CLSN2683177 ArrayExpress:Q9ZUN8
Genevestigator:Q9ZUN8 Uniprot:Q9ZUN8
Length = 469
Score = 657 (236.3 bits), Expect = 8.3e-83, Sum P(2) = 8.3e-83
Identities = 135/273 (49%), Positives = 174/273 (63%)
Query: 248 AEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGA 307
+E K G P + PL +FSGH EG+A+DWS G L +GDCK IH+W P +G+
Sbjct: 199 SETEGKDGTSPVLNQAPLVNFSGHKDEGYAIDWSPATAGRLLSGDCKSMIHLWEPA-SGS 257
Query: 308 WQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTS 367
W VD P GHT SVEDLQWSP E+ V ASCSVD S+ +WD R+ KS L+ AH +
Sbjct: 258 WAVDPIPFAGHTASVEDLQWSPAEENVFASCSVDGSVAVWDIRL--GKSPALSF-KAHNA 314
Query: 368 DVNVISWNRTEP-LIVSGGDDGCIHVWDLRRFKKGSSV-ATFKHHTAPVTTVEWHPTESS 425
DVNVISWNR ++ SG DDG + DLR K G +V A F++H P+T++EW E+S
Sbjct: 315 DVNVISWNRLASCMLASGSDDGTFSIRDLRLIKGGDAVVAHFEYHKHPITSIEWSAHEAS 374
Query: 426 TFASGGADDQIALWDLAVERDSEIEQR-EAELK-------DLPSQLLFIHLGQKEIKELH 477
T A D+Q+ +WDL++E+D E E A+ K DLP QLLF+H GQK++KELH
Sbjct: 375 TLAVTSGDNQLTIWDLSLEKDEEEEAEFNAQTKELVNTPQDLPPQLLFVHQGQKDLKELH 434
Query: 478 WHPQLPGTIISTANSGFNI---FRTISDLPSQL 507
WH Q+PG IISTA GFNI + + LPS+L
Sbjct: 435 WHNQIPGMIISTAGDGFNILMPYNIQNTLPSEL 467
Score = 275 (101.9 bits), Expect = 1.5e-36, Sum P(2) = 1.5e-36
Identities = 83/259 (32%), Positives = 118/259 (45%)
Query: 310 VDQKPLV---GHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNA-H 365
++Q PLV GH + + WSP L S I +W+ + + +P A H
Sbjct: 211 LNQAPLVNFSGHKDEGYAIDWSPATAGRLLSGDCKSMIHLWEPA--SGSWAVDPIPFAGH 268
Query: 366 TSDVNVISWNRTEP-LIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTES 424
T+ V + W+ E + S DG + VWD+R K S +FK H A V + W+ S
Sbjct: 269 TASVEDLQWSPAEENVFASCSVDGSVAVWDIRLGK--SPALSFKAHNADVNVISWNRLAS 326
Query: 425 STFASGGADDQIALWDLAVER--DSEIEQREAELKDLPS--------QLLFIHLGQKEIK 474
ASG D ++ DL + + D+ + E + S L + G ++
Sbjct: 327 CMLASGSDDGTFSIRDLRLIKGGDAVVAHFEYHKHPITSIEWSAHEASTLAVTSGDNQLT 386
Query: 475 ELHWHPQLPGTIISTANSGFN-----IFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGT 529
W L A FN + T DLP QLLF+H GQK++KELHWH Q+PG
Sbjct: 387 I--WDLSLEKDEEEEAE--FNAQTKELVNTPQDLPPQLLFVHQGQKDLKELHWHNQIPGM 442
Query: 530 IISTANSGFNIFRTISMSN 548
IISTA GFNI ++ N
Sbjct: 443 IISTAGDGFNILMPYNIQN 461
Score = 268 (99.4 bits), Expect = 1.0e-35, Sum P(2) = 1.0e-35
Identities = 68/200 (34%), Positives = 93/200 (46%)
Query: 152 AEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGA 211
+E K G P + PL +FSGH EG+A+DWS G L +GDCK IH+W P +G+
Sbjct: 199 SETEGKDGTSPVLNQAPLVNFSGHKDEGYAIDWSPATAGRLLSGDCKSMIHLWEPA-SGS 257
Query: 212 WQVDQKPLGGHTNSAEDLQWSDLKT---ALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSF 268
W VD P GHT S EDLQWS + A +VD +A + + GK P + SF
Sbjct: 258 WAVDPIPFAGHTASVEDLQWSPAEENVFASCSVDG--SVAVWDIRLGKSPAL------SF 309
Query: 269 SGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWS 328
H + + W+ +LA+G I R H + + ++WS
Sbjct: 310 KAHNADVNVISWNRLASCMLASGSDDGTFSIRDLRLIKGGDAVVAHFEYHKHPITSIEWS 369
Query: 329 PGEKRVLASCSVDLSIRIWD 348
E LA S D + IWD
Sbjct: 370 AHEASTLAVTSGDNQLTIWD 389
Score = 222 (83.2 bits), Expect = 2.3e-30, Sum P(2) = 2.3e-30
Identities = 44/120 (36%), Positives = 64/120 (53%)
Query: 575 KDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEH 634
K P + + H GC+NR+R S W + G V +WD+ + L + + +E
Sbjct: 147 KTPNIQVRRVAHHGCVNRIRAMPQNSHICVS-WADSGHVQVWDMSSHLNALAE----SET 201
Query: 635 NKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSV 694
K G P + PL +FSGH EG+A+DWS G L +GDCK IH+W P +G+W+V
Sbjct: 202 EGKDGTSPVLNQAPLVNFSGHKDEGYAIDWSPATAGRLLSGDCKSMIHLWEPA-SGSWAV 260
Score = 192 (72.6 bits), Expect = 8.3e-83, Sum P(2) = 8.3e-83
Identities = 40/81 (49%), Positives = 54/81 (66%)
Query: 52 KVYLPGTP-LDKGESLVYDPSAYVMLHEAQTGAPCLSFDIIKDELGDERTAYPQTLYAVA 110
+V+ PG L+ GE L DPSAY LH G PCLSFDI+ D+LG RT +P TLY VA
Sbjct: 30 RVWQPGVDTLEDGEELQCDPSAYNSLHGFHVGWPCLSFDILGDKLGLNRTEFPHTLYMVA 89
Query: 111 GTQSKKFNFNRLIVMKMSNLT 131
GTQ++K N + + K++N++
Sbjct: 90 GTQAEKAAHNSIGLFKITNVS 110
Score = 192 (72.6 bits), Expect = 1.1e-27, Sum P(3) = 1.1e-27
Identities = 36/58 (62%), Positives = 41/58 (70%)
Query: 702 GVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRS 759
G L +GDCK IH+W P +G+W VD P GHT SVEDLQWSP E+ V ASCSVD S
Sbjct: 237 GRLLSGDCKSMIHLWEPA-SGSWAVDPIPFAGHTASVEDLQWSPAEENVFASCSVDGS 293
Score = 51 (23.0 bits), Expect = 3.3e-13, Sum P(3) = 3.3e-13
Identities = 10/36 (27%), Positives = 16/36 (44%)
Query: 652 FSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPR 687
F+GH + WS E V A+ ++ +W R
Sbjct: 265 FAGHTASVEDLQWSPAEENVFASCSVDGSVAVWDIR 300
Score = 49 (22.3 bits), Expect = 1.1e-27, Sum P(3) = 1.1e-27
Identities = 17/54 (31%), Positives = 23/54 (42%)
Query: 364 AHTSDVNVI-SWNRTEPLIVSGGDDGCIHVWDLRRFKKG--SSVATFKHHTAPV 414
AH VN I + + + VS D G + VWD+ S K T+PV
Sbjct: 157 AHHGCVNRIRAMPQNSHICVSWADSGHVQVWDMSSHLNALAESETEGKDGTSPV 210
Score = 39 (18.8 bits), Expect = 5.5e-12, Sum P(3) = 5.5e-12
Identities = 7/24 (29%), Positives = 12/24 (50%)
Query: 661 AMDWSSTEPGVLATGDCKRNIHIW 684
+++WS+ E LA + IW
Sbjct: 365 SIEWSAHEASTLAVTSGDNQLTIW 388
Score = 39 (18.8 bits), Expect = 5.5e-12, Sum P(3) = 5.5e-12
Identities = 8/28 (28%), Positives = 13/28 (46%)
Query: 648 PLFSFSGHLTEGFAMDWSSTEPGVLATG 675
P SF H + + W+ +LA+G
Sbjct: 305 PALSFKAHNADVNVISWNRLASCMLASG 332
>ASPGD|ASPL0000069856 [details] [associations]
symbol:AN7205 species:162425 "Emericella nidulans"
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0042254 "ribosome biogenesis" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001304 InterPro:IPR022052
Pfam:PF12265 HOGENOM:HOG000036730 OMA:NRLMMLR
EnsemblFungi:CADANIAT00000249 Uniprot:C8VD17
Length = 492
Score = 568 (205.0 bits), Expect = 2.3e-74, Sum P(2) = 2.3e-74
Identities = 114/255 (44%), Positives = 160/255 (62%)
Query: 258 PGIPTPPLFSFSGHLTEGFAMDWSSTEP-GVLATGDCKRNIHIWTPREAGAWQVDQKPLV 316
P + PL + H +EG+A+DWS P G L TGD I++ T E G W D +
Sbjct: 241 PPSASKPLSTLRMHKSEGYALDWSPLHPLGKLLTGDNDGLIYVTTRTEGGGWVTDTRAFR 300
Query: 317 GHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR 376
GH +SVE+LQWSP EK V AS S D ++++WD R ++S + + ++T DVNV++W++
Sbjct: 301 GHASSVEELQWSPNEKNVFASASSDGTVKVWDVRS-KSRSPAVNVKISNT-DVNVMTWSK 358
Query: 377 -TEPLIVSGGDDGCIHVWDLRRFKKGSS---------VATFKHHTAPVTTVEWHPTESST 426
T L+ +G DDG VWDLR +K S VA+F H P+T++EWHPT+ S
Sbjct: 359 QTSHLLATGADDGQWAVWDLRHWKPNPSSSAPITASPVASFNFHKEPITSIEWHPTDDSV 418
Query: 427 FASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTI 486
A G AD+ + LWDLAVE D E E REA L D+P QLLF+H + +KE+HW Q+PGT+
Sbjct: 419 IAVGSADNTVTLWDLAVELDEE-ESREAGLADVPPQLLFVHY-MESVKEVHWQAQMPGTL 476
Query: 487 ISTANSGFNIFRTIS 501
++T + GF +F+TIS
Sbjct: 477 MATGSGGFGVFKTIS 491
Score = 230 (86.0 bits), Expect = 4.1e-32, Sum P(2) = 4.1e-32
Identities = 57/197 (28%), Positives = 92/197 (46%)
Query: 365 HTSDVNVISWNRTEP-LIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTE 423
H S V + W+ E + S DG + VWD+R K S K V + W
Sbjct: 302 HASSVEELQWSPNEKNVFASASSDGTVKVWDVRS-KSRSPAVNVKISNTDVNVMTWSKQT 360
Query: 424 SSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLP 483
S A+G D Q A+WDL + + A + P H ++ I + WHP
Sbjct: 361 SHLLATGADDGQWAVWDLRHWKPNP--SSSAPITASPVASFNFH--KEPITSIEWHPTDD 416
Query: 484 GTI-ISTANSGFNIFRT-------------ISDLPSQLLFIHLGQKEIKELHWHPQLPGT 529
I + +A++ ++ ++D+P QLLF+H + +KE+HW Q+PGT
Sbjct: 417 SVIAVGSADNTVTLWDLAVELDEEESREAGLADVPPQLLFVHY-MESVKEVHWQAQMPGT 475
Query: 530 IISTANSGFNIFRTISM 546
+++T + GF +F+TIS+
Sbjct: 476 LMATGSGGFGVFKTISV 492
Score = 205 (77.2 bits), Expect = 2.4e-29, Sum P(3) = 2.4e-29
Identities = 55/201 (27%), Positives = 90/201 (44%)
Query: 162 PGIPTPPLFSFSGHLTEGFAMDWSSTEP-GVLATGDCKRNIHIWTPREAGAWQVDQKPLG 220
P + PL + H +EG+A+DWS P G L TGD I++ T E G W D +
Sbjct: 241 PPSASKPLSTLRMHKSEGYALDWSPLHPLGKLLTGDNDGLIYVTTRTEGGGWVTDTRAFR 300
Query: 221 GHTNSAEDLQWS-DLKTALQTVDDPFQLAEHN-KKRGKGPGIPTPPLFSFSGHLTEGFAM 278
GH +S E+LQWS + K + + + + + + P + S T+ M
Sbjct: 301 GHASSVEELQWSPNEKNVFASASSDGTVKVWDVRSKSRSPAVNV----KISN--TDVNVM 354
Query: 279 DWSSTEPGVLATG-DCKR----NIHIWTPREAGAWQVDQKPLVG---HTNSVEDLQWSPG 330
WS +LATG D + ++ W P + + + P+ H + ++W P
Sbjct: 355 TWSKQTSHLLATGADDGQWAVWDLRHWKPNPSSSAPITASPVASFNFHKEPITSIEWHPT 414
Query: 331 EKRVLASCSVDLSIRIWDTRV 351
+ V+A S D ++ +WD V
Sbjct: 415 DDSVIAVGSADNTVTLWDLAV 435
Score = 201 (75.8 bits), Expect = 2.3e-74, Sum P(2) = 2.3e-74
Identities = 42/83 (50%), Positives = 55/83 (66%)
Query: 51 RKVYLPG-TPLDKGESLVYDPSAYVMLHEAQTGAPCLSFDIIKDELGDERTAYPQTLYAV 109
++ ++PG T L GE L DPS Y MLH T PCLSFDI++D LGD R YP T+YAV
Sbjct: 73 QQTFIPGRTKLAPGEVLSPDPSTYDMLHTLSTPWPCLSFDIVRDTLGDNRKTYPATVYAV 132
Query: 110 AGTQS--KKFNFNRLIVMKMSNL 130
GTQ+ ++ N L+V+K+S L
Sbjct: 133 TGTQAEGRRAKENELMVLKLSGL 155
Score = 139 (54.0 bits), Expect = 2.4e-22, Sum P(2) = 2.4e-22
Identities = 28/61 (45%), Positives = 36/61 (59%)
Query: 702 GVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNR 761
G L TGD I++ T E G W D + GH +SVE+LQWSP EK V AS S D + +
Sbjct: 270 GKLLTGDNDGLIYVTTRTEGGGWVTDTRAFRGHASSVEELQWSPNEKNVFASASSDGTVK 329
Query: 762 I 762
+
Sbjct: 330 V 330
Score = 98 (39.6 bits), Expect = 2.7e-19, Sum P(3) = 2.7e-19
Identities = 21/52 (40%), Positives = 28/52 (53%)
Query: 642 PGIPTPPLFSFSGHLTEGFAMDWSSTEP-GVLATGDCKRNIHIWTPREAGAW 692
P + PL + H +EG+A+DWS P G L TGD I++ T E G W
Sbjct: 241 PPSASKPLSTLRMHKSEGYALDWSPLHPLGKLLTGDNDGLIYVTTRTEGGGW 292
Score = 64 (27.6 bits), Expect = 2.5e-16, Sum P(3) = 2.5e-16
Identities = 20/76 (26%), Positives = 33/76 (43%)
Query: 616 WDLKTA--LQTVDDPFQLAEHNKKRGK-GPGIPTP----PLFSFSGHLTEGFAMDWSSTE 668
W +T+ L T D Q A + + K P P P+ SF+ H +++W T+
Sbjct: 356 WSKQTSHLLATGADDGQWAVWDLRHWKPNPSSSAPITASPVASFNFHKEPITSIEWHPTD 415
Query: 669 PGVLATGDCKRNIHIW 684
V+A G + +W
Sbjct: 416 DSVIAVGSADNTVTLW 431
Score = 61 (26.5 bits), Expect = 1.6e-15, Sum P(3) = 1.6e-15
Identities = 23/93 (24%), Positives = 36/93 (38%)
Query: 638 RGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAG---AWSV 694
R +G G T +F GH + + WS E V A+ + +W R A +V
Sbjct: 286 RTEGGGWVTDTR-AFRGHASSVEELQWSPNEKNVFASASSDGTVKVWDVRSKSRSPAVNV 344
Query: 695 YLYTNRFGVLATGDCKRNIHIW-TPREAGAWQV 726
+ V+ K+ H+ T + G W V
Sbjct: 345 KISNTDVNVMTWS--KQTSHLLATGADDGQWAV 375
Score = 58 (25.5 bits), Expect = 2.5e-16, Sum P(3) = 2.5e-16
Identities = 34/168 (20%), Positives = 65/168 (38%)
Query: 375 NRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADD 434
N T+ S D+G + + + GS+ + H P + + P ++ T A+ +
Sbjct: 162 NETDSESDSDDDEGGEAILEHKSIPLGSTANRIRAHQTPQSDIT-KPPQTIT-ATMLENS 219
Query: 435 QIALWDLAVERDSEIEQREAELKDLPSQ-LLFIHLGQKEIKELHWHPQLP-GTIISTANS 492
Q+ + D+ S + L S+ L + + + E L W P P G +++ N
Sbjct: 220 QVVIHDVTPHLTS-FDVPGTMLPPSASKPLSTLRMHKSEGYALDWSPLHPLGKLLTGDND 278
Query: 493 GFNIFRTISDLPSQLLFIHL--GQ-KEIKELHWHPQLPGTIISTANSG 537
G T ++ + G ++EL W P S ++ G
Sbjct: 279 GLIYVTTRTEGGGWVTDTRAFRGHASSVEELQWSPNEKNVFASASSDG 326
Score = 53 (23.7 bits), Expect = 2.7e-19, Sum P(3) = 2.7e-19
Identities = 10/47 (21%), Positives = 20/47 (42%)
Query: 716 WTPREAGAWQVDQKPLVG---HTNSVEDLQWSPGEKRVLASCSVDRS 759
W P + + + P+ H + ++W P + V+A S D +
Sbjct: 381 WKPNPSSSAPITASPVASFNFHKEPITSIEWHPTDDSVIAVGSADNT 427
Score = 43 (20.2 bits), Expect = 2.4e-29, Sum P(3) = 2.4e-29
Identities = 18/64 (28%), Positives = 27/64 (42%)
Query: 613 VGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVL 672
V +WDL L D+ E +++ G PP F ++ + W + PG L
Sbjct: 428 VTLWDLAVEL---DE-----EESREAGLAD---VPPQLLFVHYMESVKEVHWQAQMPGTL 476
Query: 673 -ATG 675
ATG
Sbjct: 477 MATG 480
Score = 37 (18.1 bits), Expect = 3.2e-15, Sum P(4) = 3.2e-15
Identities = 10/31 (32%), Positives = 13/31 (41%)
Query: 657 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPR 687
T+ M WS +LATG +W R
Sbjct: 349 TDVNVMTWSKQTSHLLATGADDGQWAVWDLR 379
>WB|WBGene00021899 [details] [associations]
symbol:Y54H5A.1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0009792 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
GeneTree:ENSGT00550000075124 HOGENOM:HOG000036730 KO:K14848
OMA:NRLMMLR EMBL:FO081201 RefSeq:NP_498091.1
ProteinModelPortal:Q9N393 SMR:Q9N393 DIP:DIP-26654N
MINT:MINT-1128766 STRING:Q9N393 PaxDb:Q9N393
EnsemblMetazoa:Y54H5A.1.1 EnsemblMetazoa:Y54H5A.1.2
EnsemblMetazoa:Y54H5A.1.3 GeneID:175701 KEGG:cel:CELE_Y54H5A.1
UCSC:Y54H5A.1.1 CTD:175701 WormBase:Y54H5A.1 InParanoid:Q9N393
NextBio:889274 Uniprot:Q9N393
Length = 453
Score = 682 (245.1 bits), Expect = 4.0e-67, P = 4.0e-67
Identities = 120/238 (50%), Positives = 164/238 (68%)
Query: 264 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVE 323
PLF+ +G EG+ + WSS + G LATGD + I++W +E G W V PL GH SVE
Sbjct: 220 PLFTNNGSGKEGYGLAWSSLKTGDLATGDIIKKIYLWQMKEGGQWAVGANPLTGHKKSVE 279
Query: 324 DLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVS 383
DL WSP E +LASCS D SI++WDTR +C+ T+ AH SDVNVISWNR E LIVS
Sbjct: 280 DLAWSPTETGLLASCSADGSIKLWDTRSAPKDACVCTVQKAHESDVNVISWNRHENLIVS 339
Query: 384 GGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAV 443
GGDDG + +W L+ + G VA FK+H +P+T+V+WHP E++TF + G DDQ +WD+A
Sbjct: 340 GGDDGELKIWSLKTIQFGQPVALFKYHNSPITSVDWHPHETTTFMASGEDDQTTIWDIAT 399
Query: 444 ERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTIS 501
E D + ++ +P QL+F+H+GQ E+KE+HWH Q+PG I+T+ GFN+F+TI+
Sbjct: 400 EADGQ-----TNIEGVPPQLMFVHMGQNEVKEVHWHQQIPGLAINTSIDGFNVFKTIN 452
Score = 313 (115.2 bits), Expect = 1.7e-25, Sum P(2) = 1.7e-25
Identities = 115/409 (28%), Positives = 169/409 (41%)
Query: 12 LEASNDIVDNDSD--EDMEQGXXXXXXXXXXXXXXXXXXXXRKVYLPGT--PLDKGESLV 67
+ ND+ +D D ED+++ R+ Y+PG PL KGE L
Sbjct: 1 MSGENDVEMHDEDPVEDIDESEEEVDETDDEDEEVPENQ--RQAYIPGLSRPLKKGEELD 58
Query: 68 YDPSAYVMLHEAQTGAPCLSFDIIKDELGDERTAYPQTLYAVAGTQSKKFNFNRLIVMKM 127
+DPSAY + H + PCLSFD++KD LG+ RT +P Y V+GTQ+ K N +IVM +
Sbjct: 59 FDPSAYKLFHSFNSDWPCLSFDVVKDGLGENRTQFPAECYIVSGTQADKPRDNEIIVMGL 118
Query: 128 SNLTSTXXXXXXXXXXXXXXPFQL----AEHNKKRG-KGPGIPTPPLFSF----SGHLTE 178
NLT+ + AE KKR K + P S L +
Sbjct: 119 KNLTTMRKEKENKGDDSDTSEDESEDEDAEEEKKREPKMHAVSIPHYGGINRIRSDRLGD 178
Query: 179 GFAMD-WSST-EPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAED---LQWSD 233
WS V D H + Q +PL + S ++ L WS
Sbjct: 179 STVCACWSDQGRVQVWNITDALNYTHGMSGESKTEVQKIDRPLFTNNGSGKEGYGLAWSS 238
Query: 234 LKTA-LQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGD 292
LKT L T D ++ K G + PL +GH + WS TE G+LA+
Sbjct: 239 LKTGDLATGDIIKKIYLWQMKEGGQWAVGANPL---TGHKKSVEDLAWSPTETGLLASCS 295
Query: 293 CKRNIHIW----TPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWD 348
+I +W P++A V QK H + V + W+ E ++ S D ++IW
Sbjct: 296 ADGSIKLWDTRSAPKDACVCTV-QK---AHESDVNVISWNRHEN-LIVSGGDDGELKIWS 350
Query: 349 TRVINTKSCMLTLPNAHTSDVNVISWN--RTEPLIVSGGDDGCIHVWDL 395
+ I + L H S + + W+ T + SG DD +WD+
Sbjct: 351 LKTIQFGQ-PVALFKYHNSPITSVDWHPHETTTFMASGEDDQTT-IWDI 397
Score = 261 (96.9 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 73/253 (28%), Positives = 119/253 (47%)
Query: 309 QVDQKPLVGHTNSVED---LQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAH 365
++D +PL + S ++ L WS + LA+ + I +W + + H
Sbjct: 216 KID-RPLFTNNGSGKEGYGLAWSSLKTGDLATGDIIKKIYLWQMKEGGQWAVGANPLTGH 274
Query: 366 TSDVNVISWNRTEP-LIVSGGDDGCIHVWDLRRFKKGSSVATF-KHHTAPVTTVEWHPTE 423
V ++W+ TE L+ S DG I +WD R K + V T K H + V + W+ E
Sbjct: 275 KKSVEDLAWSPTETGLLASCSADGSIKLWDTRSAPKDACVCTVQKAHESDVNVISWNRHE 334
Query: 424 SSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLP 483
+ SGG D ++ +W L + + Q P L H I + WHP
Sbjct: 335 N-LIVSGGDDGELKIWSL---KTIQFGQ--------PVALFKYH--NSPITSVDWHPHET 380
Query: 484 GTIISTANSG----FNIFR------TISDLPSQLLFIHLGQKEIKELHWHPQLPGTIIST 533
T +++ ++I I +P QL+F+H+GQ E+KE+HWH Q+PG I+T
Sbjct: 381 TTFMASGEDDQTTIWDIATEADGQTNIEGVPPQLMFVHMGQNEVKEVHWHQQIPGLAINT 440
Query: 534 ANSGFNIFRTISM 546
+ GFN+F+TI++
Sbjct: 441 SIDGFNVFKTINI 453
Score = 193 (73.0 bits), Expect = 7.4e-12, P = 7.4e-12
Identities = 47/151 (31%), Positives = 80/151 (52%)
Query: 574 RKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAE 633
+++P M++ I H G INR+R+ + G +T+ W + G+V +W++ AL +
Sbjct: 152 KREPKMHAVSIPHYGGINRIRSDRLGDSTVCACWSDQGRVQVWNITDALN-----YTHGM 206
Query: 634 HNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWS 693
+ + + I P LF+ +G EG+ + WSS + G LATGD + I++W +E G W+
Sbjct: 207 SGESKTEVQKIDRP-LFTNNGSGKEGYGLAWSSLKTGDLATGDIIKKIYLWQMKEGGQWA 265
Query: 694 VYLYTNRFGVLATGDCKRNIH--IWTPREAG 722
V N TG K+++ W+P E G
Sbjct: 266 VG--ANPL----TGH-KKSVEDLAWSPTETG 289
Score = 172 (65.6 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 40/85 (47%), Positives = 48/85 (56%)
Query: 691 AWSVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRV 750
AWS L T G LATGD + I++W +E G W V PL GH SVEDL WSP E +
Sbjct: 235 AWSS-LKT---GDLATGDIIKKIYLWQMKEGGQWAVGANPLTGHKKSVEDLAWSPTETGL 290
Query: 751 LASCSVDRSNRI----GARRDMLYC 771
LASCS D S ++ A +D C
Sbjct: 291 LASCSADGSIKLWDTRSAPKDACVC 315
Score = 37 (18.1 bits), Expect = 1.7e-25, Sum P(2) = 1.7e-25
Identities = 12/38 (31%), Positives = 16/38 (42%)
Query: 583 FIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKT 620
F H I V + +TT GE + IWD+ T
Sbjct: 363 FKYHNSPITSVDWHPHETTTFMAS-GEDDQTTIWDIAT 399
>CGD|CAL0001341 [details] [associations]
symbol:orf19.6355 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0001341 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AACQ01000192 EMBL:AACQ01000189
InterPro:IPR022052 Pfam:PF12265 KO:K14848 RefSeq:XP_711573.1
RefSeq:XP_711642.1 ProteinModelPortal:Q59PD8 STRING:Q59PD8
GeneID:3646750 GeneID:3646833 KEGG:cal:CaO19.13712
KEGG:cal:CaO19.6355 eggNOG:NOG254774 Uniprot:Q59PD8
Length = 517
Score = 492 (178.3 bits), Expect = 3.4e-63, Sum P(2) = 3.4e-63
Identities = 111/281 (39%), Positives = 155/281 (55%)
Query: 233 DLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGH-LTEGFAMDWSS-TEPGVLAT 290
DL + D P + + KR P+ + H EG+ +DWS G L +
Sbjct: 249 DLSAQYKAFDTPGYMIPKSSKR---------PIHTIRAHGNVEGYGLDWSPLVNTGALLS 299
Query: 291 GDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTR 350
GD I++ T R +W D+ P +S+ED+QWS GE V A+ D IRIWDTR
Sbjct: 300 GDMSGRIYL-TNRTTSSWTTDKTPFFASQSSIEDIQWSTGETTVFATGGCDGYIRIWDTR 358
Query: 351 VINTKSCMLTLPNAHTSDVNVISWN-RTEPLIVSGGDDGCIHVWDLRRFKKG-----SSV 404
K + + A SDVNVISW+ + L+ SG DDG VWDLR F S V
Sbjct: 359 SKKHKPALSVI--ASKSDVNVISWSSKINHLLASGHDDGSWGVWDLRNFTNNTTSNPSPV 416
Query: 405 ATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSE-IEQ--REA-ELKDLP 460
A + H +P+T++ ++P + S A D+ + LWDLAVE D E I Q +EA EL D+P
Sbjct: 417 ANYDFHKSPITSISFNPLDESIIAVSSEDNTVTLWDLAVEADDEEISQQRKEAQELHDIP 476
Query: 461 SQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTIS 501
QLLF+H Q+++K++ WHPQ+PG ++ST G NI++TIS
Sbjct: 477 PQLLFVHW-QRDVKDVRWHPQIPGCLVSTGGDGLNIWKTIS 516
Score = 179 (68.1 bits), Expect = 3.4e-63, Sum P(2) = 3.4e-63
Identities = 44/128 (34%), Positives = 61/128 (47%)
Query: 13 EASNDIV---DNDSDEDMEQGXXXXXXXXXXXXXXXXXXXXRK--VYLP--GTPLDKGES 65
E+ +I+ DN+ +ED E ++ +YLP PL E
Sbjct: 56 ESDEEIIELDDNNDEEDDEMIDENSTQAKIEELEAKEQEQEQQSSIYLPHKSKPLGPDEV 115
Query: 66 LVYDPSAYVMLHEAQTGAPCLSFDIIKDELGDERTAYPQTLYAVAGTQSKKFNFNRLIVM 125
L DP+ Y MLH PCL+ DI+ D LG+ER +YP T+Y TQ+ K N L+ M
Sbjct: 116 LEADPTVYEMLHNINLPWPCLTVDILSDSLGNERRSYPATVYLATATQAAKAKDNELLAM 175
Query: 126 KMSNLTST 133
K S+L T
Sbjct: 176 KASSLAKT 183
Score = 153 (58.9 bits), Expect = 6.0e-32, Sum P(3) = 6.0e-32
Identities = 46/193 (23%), Positives = 84/193 (43%)
Query: 168 PLFSFSGH-LTEGFAMDWSS-TEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNS 225
P+ + H EG+ +DWS G L +GD I++ T R +W D+ P +S
Sbjct: 271 PIHTIRAHGNVEGYGLDWSPLVNTGALLSGDMSGRIYL-TNRTTSSWTTDKTPFFASQSS 329
Query: 226 AEDLQWSDLKTALQTV---DDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSS 282
ED+QWS +T + D ++ + K+ K P S ++ + WSS
Sbjct: 330 IEDIQWSTGETTVFATGGCDGYIRIWDTRSKKHK-------PALSVIASKSDVNVISWSS 382
Query: 283 TEPGVLATGDCKRNIHIWTPRE-AGAWQVDQKPLVG---HTNSVEDLQWSPGEKRVLASC 338
+LA+G + +W R + P+ H + + + ++P ++ ++A
Sbjct: 383 KINHLLASGHDDGSWGVWDLRNFTNNTTSNPSPVANYDFHKSPITSISFNPLDESIIAVS 442
Query: 339 SVDLSIRIWDTRV 351
S D ++ +WD V
Sbjct: 443 SEDNTVTLWDLAV 455
Score = 146 (56.5 bits), Expect = 6.0e-32, Sum P(3) = 6.0e-32
Identities = 23/47 (48%), Positives = 37/47 (78%)
Query: 500 ISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISM 546
+ D+P QLLF+H Q+++K++ WHPQ+PG ++ST G NI++TIS+
Sbjct: 472 LHDIPPQLLFVHW-QRDVKDVRWHPQIPGCLVSTGGDGLNIWKTISV 517
Score = 129 (50.5 bits), Expect = 9.0e-19, Sum P(2) = 9.0e-19
Identities = 55/207 (26%), Positives = 80/207 (38%)
Query: 576 DPVMNSYFIRHRGCINRVRTCQYGSTT---LAGVWGEVGKVGIWDLKTALQTVDDPFQLA 632
DP+++S I R NR+R + T L E G+V I+DL + D P +
Sbjct: 205 DPILDSESIPLRHTTNRIRVSPHAQQTGEYLTASMSENGEVYIFDLSAQYKAFDTPGYMI 264
Query: 633 EHNKKRGKGPGIPTPPLFSFSGH-LTEGFAMDWSS-TEPGVLATGDCKRNIHIWTPREAG 690
+ KR P+ + H EG+ +DWS G L +GD I++ T R
Sbjct: 265 PKSSKR---------PIHTIRAHGNVEGYGLDWSPLVNTGALLSGDMSGRIYL-TNRTTS 314
Query: 691 AWS---------------VYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKP---LV 732
+W+ + T V ATG C I IW R KP ++
Sbjct: 315 SWTTDKTPFFASQSSIEDIQWSTGETTVFATGGCDGYIRIWDTRSK-----KHKPALSVI 369
Query: 733 GHTNSVEDLQWSPGEKRVLASCSVDRS 759
+ V + WS +LAS D S
Sbjct: 370 ASKSDVNVISWSSKINHLLASGHDDGS 396
Score = 116 (45.9 bits), Expect = 2.0e-17, Sum P(2) = 2.0e-17
Identities = 35/101 (34%), Positives = 46/101 (45%)
Query: 669 PGVLATGDCKRNIHIWTPREAGA-------WSVYLYTNRFGVLATGDCKRNIHIWTPREA 721
PG + KR IH T R G WS + T G L +GD I++ T R
Sbjct: 260 PGYMIPKSSKRPIH--TIRAHGNVEGYGLDWSPLVNT---GALLSGDMSGRIYL-TNRTT 313
Query: 722 GAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRI 762
+W D+ P +S+ED+QWS GE V A+ D RI
Sbjct: 314 SSWTTDKTPFFASQSSIEDIQWSTGETTVFATGGCDGYIRI 354
Score = 70 (29.7 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 26/94 (27%), Positives = 40/94 (42%)
Query: 648 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAG---AWSVYLYTNRFGVL 704
P F+ + + + WS+ E V ATG C I IW R A SV + V+
Sbjct: 322 PFFASQSSIED---IQWSTGETTVFATGGCDGYIRIWDTRSKKHKPALSVIASKSDVNVI 378
Query: 705 ATGDCKRNIHIWTPREAGAWQV-DQKPLVGHTNS 737
+ K N + + + G+W V D + +T S
Sbjct: 379 SWSS-KINHLLASGHDDGSWGVWDLRNFTNNTTS 411
Score = 43 (20.2 bits), Expect = 7.5e-10, Sum P(2) = 7.5e-10
Identities = 11/40 (27%), Positives = 18/40 (45%)
Query: 611 GKVGIWDLKTALQ-TVDDPFQLAEHNKKRGKGPGIPTPPL 649
G G+WDL+ T +P +A ++ + I PL
Sbjct: 395 GSWGVWDLRNFTNNTTSNPSPVANYDFHKSPITSISFNPL 434
>UNIPROTKB|Q59PD8 [details] [associations]
symbol:RRB1 "Likely nucleolar ribosome biogenesis factor
Rrb1p" species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0001341 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AACQ01000192 EMBL:AACQ01000189
InterPro:IPR022052 Pfam:PF12265 KO:K14848 RefSeq:XP_711573.1
RefSeq:XP_711642.1 ProteinModelPortal:Q59PD8 STRING:Q59PD8
GeneID:3646750 GeneID:3646833 KEGG:cal:CaO19.13712
KEGG:cal:CaO19.6355 eggNOG:NOG254774 Uniprot:Q59PD8
Length = 517
Score = 492 (178.3 bits), Expect = 3.4e-63, Sum P(2) = 3.4e-63
Identities = 111/281 (39%), Positives = 155/281 (55%)
Query: 233 DLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGH-LTEGFAMDWSS-TEPGVLAT 290
DL + D P + + KR P+ + H EG+ +DWS G L +
Sbjct: 249 DLSAQYKAFDTPGYMIPKSSKR---------PIHTIRAHGNVEGYGLDWSPLVNTGALLS 299
Query: 291 GDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTR 350
GD I++ T R +W D+ P +S+ED+QWS GE V A+ D IRIWDTR
Sbjct: 300 GDMSGRIYL-TNRTTSSWTTDKTPFFASQSSIEDIQWSTGETTVFATGGCDGYIRIWDTR 358
Query: 351 VINTKSCMLTLPNAHTSDVNVISWN-RTEPLIVSGGDDGCIHVWDLRRFKKG-----SSV 404
K + + A SDVNVISW+ + L+ SG DDG VWDLR F S V
Sbjct: 359 SKKHKPALSVI--ASKSDVNVISWSSKINHLLASGHDDGSWGVWDLRNFTNNTTSNPSPV 416
Query: 405 ATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSE-IEQ--REA-ELKDLP 460
A + H +P+T++ ++P + S A D+ + LWDLAVE D E I Q +EA EL D+P
Sbjct: 417 ANYDFHKSPITSISFNPLDESIIAVSSEDNTVTLWDLAVEADDEEISQQRKEAQELHDIP 476
Query: 461 SQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTIS 501
QLLF+H Q+++K++ WHPQ+PG ++ST G NI++TIS
Sbjct: 477 PQLLFVHW-QRDVKDVRWHPQIPGCLVSTGGDGLNIWKTIS 516
Score = 179 (68.1 bits), Expect = 3.4e-63, Sum P(2) = 3.4e-63
Identities = 44/128 (34%), Positives = 61/128 (47%)
Query: 13 EASNDIV---DNDSDEDMEQGXXXXXXXXXXXXXXXXXXXXRK--VYLP--GTPLDKGES 65
E+ +I+ DN+ +ED E ++ +YLP PL E
Sbjct: 56 ESDEEIIELDDNNDEEDDEMIDENSTQAKIEELEAKEQEQEQQSSIYLPHKSKPLGPDEV 115
Query: 66 LVYDPSAYVMLHEAQTGAPCLSFDIIKDELGDERTAYPQTLYAVAGTQSKKFNFNRLIVM 125
L DP+ Y MLH PCL+ DI+ D LG+ER +YP T+Y TQ+ K N L+ M
Sbjct: 116 LEADPTVYEMLHNINLPWPCLTVDILSDSLGNERRSYPATVYLATATQAAKAKDNELLAM 175
Query: 126 KMSNLTST 133
K S+L T
Sbjct: 176 KASSLAKT 183
Score = 153 (58.9 bits), Expect = 6.0e-32, Sum P(3) = 6.0e-32
Identities = 46/193 (23%), Positives = 84/193 (43%)
Query: 168 PLFSFSGH-LTEGFAMDWSS-TEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNS 225
P+ + H EG+ +DWS G L +GD I++ T R +W D+ P +S
Sbjct: 271 PIHTIRAHGNVEGYGLDWSPLVNTGALLSGDMSGRIYL-TNRTTSSWTTDKTPFFASQSS 329
Query: 226 AEDLQWSDLKTALQTV---DDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSS 282
ED+QWS +T + D ++ + K+ K P S ++ + WSS
Sbjct: 330 IEDIQWSTGETTVFATGGCDGYIRIWDTRSKKHK-------PALSVIASKSDVNVISWSS 382
Query: 283 TEPGVLATGDCKRNIHIWTPRE-AGAWQVDQKPLVG---HTNSVEDLQWSPGEKRVLASC 338
+LA+G + +W R + P+ H + + + ++P ++ ++A
Sbjct: 383 KINHLLASGHDDGSWGVWDLRNFTNNTTSNPSPVANYDFHKSPITSISFNPLDESIIAVS 442
Query: 339 SVDLSIRIWDTRV 351
S D ++ +WD V
Sbjct: 443 SEDNTVTLWDLAV 455
Score = 146 (56.5 bits), Expect = 6.0e-32, Sum P(3) = 6.0e-32
Identities = 23/47 (48%), Positives = 37/47 (78%)
Query: 500 ISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISM 546
+ D+P QLLF+H Q+++K++ WHPQ+PG ++ST G NI++TIS+
Sbjct: 472 LHDIPPQLLFVHW-QRDVKDVRWHPQIPGCLVSTGGDGLNIWKTISV 517
Score = 129 (50.5 bits), Expect = 9.0e-19, Sum P(2) = 9.0e-19
Identities = 55/207 (26%), Positives = 80/207 (38%)
Query: 576 DPVMNSYFIRHRGCINRVRTCQYGSTT---LAGVWGEVGKVGIWDLKTALQTVDDPFQLA 632
DP+++S I R NR+R + T L E G+V I+DL + D P +
Sbjct: 205 DPILDSESIPLRHTTNRIRVSPHAQQTGEYLTASMSENGEVYIFDLSAQYKAFDTPGYMI 264
Query: 633 EHNKKRGKGPGIPTPPLFSFSGH-LTEGFAMDWSS-TEPGVLATGDCKRNIHIWTPREAG 690
+ KR P+ + H EG+ +DWS G L +GD I++ T R
Sbjct: 265 PKSSKR---------PIHTIRAHGNVEGYGLDWSPLVNTGALLSGDMSGRIYL-TNRTTS 314
Query: 691 AWS---------------VYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKP---LV 732
+W+ + T V ATG C I IW R KP ++
Sbjct: 315 SWTTDKTPFFASQSSIEDIQWSTGETTVFATGGCDGYIRIWDTRSK-----KHKPALSVI 369
Query: 733 GHTNSVEDLQWSPGEKRVLASCSVDRS 759
+ V + WS +LAS D S
Sbjct: 370 ASKSDVNVISWSSKINHLLASGHDDGS 396
Score = 116 (45.9 bits), Expect = 2.0e-17, Sum P(2) = 2.0e-17
Identities = 35/101 (34%), Positives = 46/101 (45%)
Query: 669 PGVLATGDCKRNIHIWTPREAGA-------WSVYLYTNRFGVLATGDCKRNIHIWTPREA 721
PG + KR IH T R G WS + T G L +GD I++ T R
Sbjct: 260 PGYMIPKSSKRPIH--TIRAHGNVEGYGLDWSPLVNT---GALLSGDMSGRIYL-TNRTT 313
Query: 722 GAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRI 762
+W D+ P +S+ED+QWS GE V A+ D RI
Sbjct: 314 SSWTTDKTPFFASQSSIEDIQWSTGETTVFATGGCDGYIRI 354
Score = 70 (29.7 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 26/94 (27%), Positives = 40/94 (42%)
Query: 648 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAG---AWSVYLYTNRFGVL 704
P F+ + + + WS+ E V ATG C I IW R A SV + V+
Sbjct: 322 PFFASQSSIED---IQWSTGETTVFATGGCDGYIRIWDTRSKKHKPALSVIASKSDVNVI 378
Query: 705 ATGDCKRNIHIWTPREAGAWQV-DQKPLVGHTNS 737
+ K N + + + G+W V D + +T S
Sbjct: 379 SWSS-KINHLLASGHDDGSWGVWDLRNFTNNTTS 411
Score = 43 (20.2 bits), Expect = 7.5e-10, Sum P(2) = 7.5e-10
Identities = 11/40 (27%), Positives = 18/40 (45%)
Query: 611 GKVGIWDLKTALQ-TVDDPFQLAEHNKKRGKGPGIPTPPL 649
G G+WDL+ T +P +A ++ + I PL
Sbjct: 395 GSWGVWDLRNFTNNTTSNPSPVANYDFHKSPITSISFNPL 434
>POMBASE|SPBC1711.07 [details] [associations]
symbol:SPBC1711.07 "WD repeat protein Rrb1 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0005829
"cytosol" evidence=IDA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=ISS] [GO:0043234
"protein complex" evidence=NAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC1711.07 GO:GO:0005829
GO:GO:0043234 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319
GenomeReviews:CU329671_GR GO:GO:0042254 GO:GO:0006364
InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000036730 KO:K14848
OMA:NRLMMLR RefSeq:NP_595880.1 ProteinModelPortal:Q9P783
STRING:Q9P783 EnsemblFungi:SPBC1711.07.1 GeneID:2539693
KEGG:spo:SPBC1711.07 OrthoDB:EOG4XWK6B NextBio:20800846
Uniprot:Q9P783
Length = 480
Score = 638 (229.6 bits), Expect = 1.8e-62, P = 1.8e-62
Identities = 129/246 (52%), Positives = 166/246 (67%)
Query: 264 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVE 323
PL++ + H TEG+A+DWS E +L+ GD I + T G WQ D P + HT +VE
Sbjct: 238 PLYTVNRHKTEGYALDWSPFEYSLLS-GDNANEIFL-TKYSNGGWQTDSSPFLSHTAAVE 295
Query: 324 DLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTS-DVNVISWNRTEP-LI 381
DLQWSP EK V +SCS D + RIWD R K+ LT+ NAH DVNV+SWN P L+
Sbjct: 296 DLQWSPSEKNVFSSCSCDGTFRIWDVRN-KQKTSALTV-NAHPGVDVNVLSWNTRVPNLL 353
Query: 382 VSGGDDGCIHVWDLRRFKKGSSVAT----FKHHTAPVTTVEWHPTESSTFASGGADDQIA 437
+G D+G VWDLR K SSVAT FK H AP+ ++EWHP E S GAD+QI+
Sbjct: 354 ATGADNGVWSVWDLRSLKSSSSVATPVASFKWHRAPIYSIEWHPNEDSVIGVVGADNQIS 413
Query: 438 LWDLAVERDSEIEQ-REAE-LKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFN 495
LWDL+VE D E + R AE L+D+P QL+FIH+GQ+EIKE+HWH Q+PGTI+STA +G N
Sbjct: 414 LWDLSVELDEEEQDSRAAEGLQDVPPQLMFIHMGQQEIKEMHWHRQIPGTIVSTAMTGIN 473
Query: 496 IFRTIS 501
+F+TI+
Sbjct: 474 VFKTIT 479
Score = 270 (100.1 bits), Expect = 6.6e-21, Sum P(2) = 6.6e-21
Identities = 100/364 (27%), Positives = 153/364 (42%)
Query: 54 YLPGTPLDKGESLVYDPSAYVMLHEAQTGAPCLSFDIIKDELGDERTAYPQTLYAVAGTQ 113
+LPG ++ E LV DPS Y MLH Q P LSFDI++D LG+ER A+P +Y V G+Q
Sbjct: 75 WLPGGKINADEKLVADPSVYEMLHNIQVKWPFLSFDILQDSLGEERRAWPHQMYLVGGSQ 134
Query: 114 SKKFNFNRLIVMKMSNLTSTXXXXXXXXXXXXXXPFQ-LAEHNKKRGKGPGIPTPPLFSF 172
+ N N L VMK+S L T + EH KG
Sbjct: 135 ALDSNDNELTVMKLSQLYKTQHDENDDASDNSDVEEDPILEHKSISTKG----------- 183
Query: 173 SGHLTEGFAMDWSSTEPGVLATGDCKRNIHIW--TPR----EAGAWQVDQK---PL---G 220
+ + +S++ +LA+ +HIW P ++ V +K PL
Sbjct: 184 ACNRVRSARRPANSSKESLLASFHETGKVHIWDIAPHLRSLDSPGVMVSRKENSPLYTVN 243
Query: 221 GHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDW 280
H L WS + +L + D+ ++ G G + P S + + + + W
Sbjct: 244 RHKTEGYALDWSPFEYSLLSGDNANEIFLTKYSNG-GWQTDSSPFLSHTAAVED---LQW 299
Query: 281 SSTEPGVLATGDCKRNIHIWTPR---EAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLAS 337
S +E V ++ C IW R + A V+ P V V L W+ +LA+
Sbjct: 300 SPSEKNVFSSCSCDGTFRIWDVRNKQKTSALTVNAHPGV----DVNVLSWNTRVPNLLAT 355
Query: 338 CSVDLSI-RIWDTRVINTKSCMLTLPNA----HTSDVNVISWNRTEPLIVSG-GDDGCIH 391
D + +WD R + + S + T P A H + + I W+ E ++ G D I
Sbjct: 356 -GADNGVWSVWDLRSLKSSSSVAT-PVASFKWHRAPIYSIEWHPNEDSVIGVVGADNQIS 413
Query: 392 VWDL 395
+WDL
Sbjct: 414 LWDL 417
Score = 252 (93.8 bits), Expect = 2.5e-18, P = 2.5e-18
Identities = 70/232 (30%), Positives = 116/232 (50%)
Query: 325 LQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPN-AHTSDVNVISWNRTEPLIVS 383
L WSP E +L+ D + I+ T+ N + P +HT+ V + W+ +E + S
Sbjct: 252 LDWSPFEYSLLSG---DNANEIFLTKYSNGGWQTDSSPFLSHTAAVEDLQWSPSEKNVFS 308
Query: 384 GGD-DGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQI-ALWDL 441
DG +WD+R +K S++ H V + W+ + A+G AD+ + ++WDL
Sbjct: 309 SCSCDGTFRIWDVRNKQKTSALTVNAHPGVDVNVLSWNTRVPNLLATG-ADNGVWSVWDL 367
Query: 442 -AVERDSEIEQREAELKDLPSQLLFIHLGQKE---IKELHWHPQLP----GTIISTANSG 493
+++ S + A K + + I E I + Q+ +
Sbjct: 368 RSLKSSSSVATPVASFKWHRAPIYSIEWHPNEDSVIGVVGADNQISLWDLSVELDEEEQD 427
Query: 494 FNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTIS 545
+ D+P QL+FIH+GQ+EIKE+HWH Q+PGTI+STA +G N+F+TI+
Sbjct: 428 SRAAEGLQDVPPQLMFIHMGQQEIKEMHWHRQIPGTIVSTAMTGINVFKTIT 479
Score = 150 (57.9 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 41/104 (39%), Positives = 53/104 (50%)
Query: 665 SSTEPGVLATGDCKRNIHIWTPR----EAGA--WSVYLYTNRFGVLATGDCKRNIHIWTP 718
S PGV+ + K N ++T E A WS + Y+ L +GD I + T
Sbjct: 223 SLDSPGVMVSR--KENSPLYTVNRHKTEGYALDWSPFEYS-----LLSGDNANEIFL-TK 274
Query: 719 REAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRI 762
G WQ D P + HT +VEDLQWSP EK V +SCS D + RI
Sbjct: 275 YSNGGWQTDSSPFLSHTAAVEDLQWSPSEKNVFSSCSCDGTFRI 318
Score = 139 (54.0 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 38/122 (31%), Positives = 62/122 (50%)
Query: 575 KDPVMNSYFIRHRGCINRVRTCQYGSTT----LAGVWGEVGKVGIWDLKTALQTVDDPFQ 630
+DP++ I +G NRVR+ + + + L + E GKV IWD+ L+++D P
Sbjct: 170 EDPILEHKSISTKGACNRVRSARRPANSSKESLLASFHETGKVHIWDIAPHLRSLDSPGV 229
Query: 631 LAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAG 690
+ ++K PL++ + H TEG+A+DWS E +L+ GD I + T G
Sbjct: 230 MV--SRKENS-------PLYTVNRHKTEGYALDWSPFEYSLLS-GDNANEIFL-TKYSNG 278
Query: 691 AW 692
W
Sbjct: 279 GW 280
Score = 49 (22.3 bits), Expect = 6.6e-21, Sum P(2) = 6.6e-21
Identities = 18/74 (24%), Positives = 31/74 (41%)
Query: 602 TLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKG-PGIPTPPLFSFSGHLTEGF 660
++ GV G ++ +WDL L D+ E + + +G +P +F G E
Sbjct: 401 SVIGVVGADNQISLWDLSVEL---DEE----EQDSRAAEGLQDVPPQLMFIHMGQ-QEIK 452
Query: 661 AMDWSSTEPGVLAT 674
M W PG + +
Sbjct: 453 EMHWHRQIPGTIVS 466
Score = 42 (19.8 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 13/58 (22%), Positives = 21/58 (36%)
Query: 703 VLATGDCKRNIHIWTPREAGAWQVDQKPLVG---HTNSVEDLQWSPGEKRVLASCSVD 757
+LATG +W R + P+ H + ++W P E V+ D
Sbjct: 352 LLATGADNGVWSVWDLRSLKSSSSVATPVASFKWHRAPIYSIEWHPNEDSVIGVVGAD 409
>DICTYBASE|DDB_G0291566 [details] [associations]
symbol:grwd1 "glutamate-rich WD repeat-containing
protein 1" species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0291566 EMBL:AAFI02000177 GenomeReviews:CM000155_GR
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052
Pfam:PF12265 KO:K14848 OMA:NRLMMLR RefSeq:XP_635306.1
ProteinModelPortal:Q54ED4 STRING:Q54ED4 EnsemblProtists:DDB0267050
GeneID:8628250 KEGG:ddi:DDB_G0291566 ProtClustDB:CLSZ2732316
Uniprot:Q54ED4
Length = 482
Score = 628 (226.1 bits), Expect = 2.1e-61, P = 2.1e-61
Identities = 125/262 (47%), Positives = 164/262 (62%)
Query: 245 FQLAEHNKKRGKGPGIP--TPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTP 302
+ +A H K P T PL + S H EG+A+DWS G LATGDC +I +
Sbjct: 221 WNIANHLKALDNETVAPKQTAPLHTISNHSIEGYALDWSPKIAGRLATGDCNNSIFVTNA 280
Query: 303 REAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLP 362
E+ W+ D + GHT SVED+QWSP E++V ASCS+D ++RIWD R K +T+
Sbjct: 281 SES-TWKTDTQAFKGHTESVEDIQWSPSEEKVFASCSIDQTVRIWDIR--KPKPA-ITV- 335
Query: 363 NAHTSDVNVISWNRT-EPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHP 421
AHT+DVNVISW+R E L+VSG DDG VWDLR FK S V+ FK+HT P+T++EW+P
Sbjct: 336 KAHTADVNVISWSRNVEYLLVSGCDDGSFRVWDLRAFKDNSPVSDFKYHTGPITSIEWNP 395
Query: 422 TESSTFASGGADDQIALWDLAVERDSE-IEQREAELKD---LPSQLLFIHLGQKEIKELH 477
E S +DDQ+ +WD ++E D+E A D P QL FIH GQ +IKE+H
Sbjct: 396 YEESQVIVSSSDDQVTIWDFSLEEDTEEFTNANANPDDDFQYPPQLFFIHQGQHDIKEVH 455
Query: 478 WHPQLPGTIISTANSGFNIFRT 499
WHPQ+P IST+ GFNIF++
Sbjct: 456 WHPQIPHVAISTSIDGFNIFKS 477
Score = 293 (108.2 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 105/363 (28%), Positives = 153/363 (42%)
Query: 51 RKVYLPGT-PLDKGESLVYDPSAYVMLHEAQTGAPCLSFDIIKDELGDERTAYPQTLYAV 109
+KV+ G PL++ E L YD +AY M+H PCLSF IKDELG +R YP T+Y V
Sbjct: 69 KKVWRAGVDPLEEDEVLDYDSTAYDMMHSMSVEWPCLSFHPIKDELGAQRNKYPHTMYLV 128
Query: 110 AGTQSKKFNFNRLIVMKMSNLTSTXXXXXXXXXXXXXXPFQLA--EHNKKRGKGPGIPTP 167
AGTQ+ + N++I+MK L T + + E ++ + P +
Sbjct: 129 AGTQADEAKNNKVIIMKAKQLHKTKHDDEDSDDDEDSDDDEESDDEDDEDKDVDPELQLA 188
Query: 168 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWT-PREAGAWQ---VDQK---PL- 219
+ +G + +MD S ++AT R+++IW A V K PL
Sbjct: 189 -FINHNGAVNRIRSMDQQSN---IVATWSDNRSVYIWNIANHLKALDNETVAPKQTAPLH 244
Query: 220 --GGHTNSAEDLQWSD-LKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGF 276
H+ L WS + L T D + N T +F GH
Sbjct: 245 TISNHSIEGYALDWSPKIAGRLATGDCNNSIFVTNASESTWK-TDTQ---AFKGHTESVE 300
Query: 277 AMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLV---GHTNSVEDLQWSPGEKR 333
+ WS +E V A+ + + IW R+ KP + HT V + WS +
Sbjct: 301 DIQWSPSEEKVFASCSIDQTVRIWDIRKP-------KPAITVKAHTADVNVISWSRNVEY 353
Query: 334 VLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEP--LIVSGGDDGCIH 391
+L S D S R+WD R S + HT + I WN E +IVS DD +
Sbjct: 354 LLVSGCDDGSFRVWDLRAFKDNSPVSDF-KYHTGPITSIEWNPYEESQVIVSSSDDQ-VT 411
Query: 392 VWD 394
+WD
Sbjct: 412 IWD 414
Score = 236 (88.1 bits), Expect = 1.5e-16, P = 1.5e-16
Identities = 78/278 (28%), Positives = 118/278 (42%)
Query: 284 EPGVLATGDCKRNIHIWT-PREAGAWQ---VDQKPLVG-HT---NSVED--LQWSPGEKR 333
+ ++AT R+++IW A V K HT +S+E L WSP
Sbjct: 205 QSNIVATWSDNRSVYIWNIANHLKALDNETVAPKQTAPLHTISNHSIEGYALDWSPKIAG 264
Query: 334 VLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLI-VSGGDDGCIHV 392
LA+ + SI + + K+ HT V I W+ +E + S D + +
Sbjct: 265 RLATGDCNNSIFVTNASESTWKTDTQAF-KGHTESVEDIQWSPSEEKVFASCSIDQTVRI 323
Query: 393 WDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERD----SE 448
WD+R+ K +V K HTA V + W SG D +WDL +D S+
Sbjct: 324 WDIRKPKPAITV---KAHTADVNVISWSRNVEYLLVSGCDDGSFRVWDLRAFKDNSPVSD 380
Query: 449 IEQREAELKDL---PSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPS 505
+ + + P + + + + + W L N+ N P
Sbjct: 381 FKYHTGPITSIEWNPYEESQVIVSSSDDQVTIWDFSLEEDTEEFTNANANPDDDFQ-YPP 439
Query: 506 QLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRT 543
QL FIH GQ +IKE+HWHPQ+P IST+ GFNIF++
Sbjct: 440 QLFFIHQGQHDIKEVHWHPQIPHVAISTSIDGFNIFKS 477
Score = 170 (64.9 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 57/203 (28%), Positives = 86/203 (42%)
Query: 576 DPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHN 635
DP + FI H G +NR+R+ S +A W + V IW++ L+ +D+ +
Sbjct: 182 DPELQLAFINHNGAVNRIRSMDQQSNIVA-TWSDNRSVYIWNIANHLKALDNETVAPKQ- 239
Query: 636 KKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSVY 695
T PL + S H EG+A+DWS G LATGDC +I + E+ W
Sbjct: 240 ----------TAPLHTISNHSIEGYALDWSPKIAGRLATGDCNNSIFVTNASES-TWK-- 286
Query: 696 LYTNRFGVLATGDCKRNIHIWTPREAGAW---QVDQ----------KPLV---GHTNSVE 739
T+ + +I W+P E + +DQ KP + HT V
Sbjct: 287 --TDTQAFKGHTESVEDIQ-WSPSEEKVFASCSIDQTVRIWDIRKPKPAITVKAHTADVN 343
Query: 740 DLQWSPGEKRVLASCSVDRSNRI 762
+ WS + +L S D S R+
Sbjct: 344 VISWSRNVEYLLVSGCDDGSFRV 366
Score = 39 (18.8 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 7/25 (28%), Positives = 13/25 (52%)
Query: 736 NSVEDLQWSPGEKRVLASCSVDRSN 760
+ ++++ W P V S S+D N
Sbjct: 449 HDIKEVHWHPQIPHVAISTSIDGFN 473
>SGD|S000004738 [details] [associations]
symbol:RRB1 "Nuclear protein involved in early steps of
ribosome biogenesis" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0042254
"ribosome biogenesis" evidence=IEA;IMP;IPI] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000004738 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0042254 EMBL:BK006946
GO:GO:0006364 InterPro:IPR022052 Pfam:PF12265 EMBL:Z48622
GeneTree:ENSGT00550000075124 HOGENOM:HOG000036730 KO:K14848
OMA:NRLMMLR OrthoDB:EOG4XWK6B PIR:S53061 RefSeq:NP_013850.1
ProteinModelPortal:Q04225 SMR:Q04225 DIP:DIP-6263N IntAct:Q04225
MINT:MINT-1168783 STRING:Q04225 PaxDb:Q04225 PeptideAtlas:Q04225
EnsemblFungi:YMR131C GeneID:855161 KEGG:sce:YMR131C CYGD:YMR131c
NextBio:978584 Genevestigator:Q04225 GermOnline:YMR131C
Uniprot:Q04225
Length = 511
Score = 470 (170.5 bits), Expect = 3.3e-60, Sum P(2) = 3.3e-60
Identities = 107/275 (38%), Positives = 155/275 (56%)
Query: 245 FQLAEHNKKRGKGPGIPTP-----PLFSFSGH-LTEGFAMDWSST-EPGVLATGDCKRNI 297
+ LA +K PG P P+ + H EG+ +DWS + G L +GDC I
Sbjct: 241 YNLAPQSKAFST-PGYQIPKSAKRPIHTVKNHGNVEGYGLDWSPLIKTGALLSGDCSGQI 299
Query: 298 HIWTPREAGAWQVDQKPL-VGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKS 356
+ +T R W D++P V + S+ED+QWS E V A+ D IRIWDTR K
Sbjct: 300 Y-FTQRHTSRWVTDKQPFTVSNNKSIEDIQWSRTESTVFATAGCDGYIRIWDTRSKKHKP 358
Query: 357 CMLTLPNAHTSDVNVISWN-RTEPLIVSGGDDGCIHVWDLRRFKKGSS-----VATFKHH 410
+ A +DVNVISW+ + L+ SG D+G VWDLR+F ++ VA + H
Sbjct: 359 AISV--KASNTDVNVISWSDKIGYLLASGDDNGTWGVWDLRQFTPSNADAVQPVAQYDFH 416
Query: 411 TAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSE-IEQREAELKDL---PSQLLFI 466
+T++ ++P + S A G D+ + LWDL+VE D E I+Q+ AE K+L P QLLF+
Sbjct: 417 KGAITSIAFNPLDESIVAVGSEDNTVTLWDLSVEADDEEIKQQAAETKELQEIPPQLLFV 476
Query: 467 HLGQKEIKELHWHPQLPGTIISTANSGFNIFRTIS 501
H QKE+K++ WH Q+PG ++ST G N+++TIS
Sbjct: 477 HW-QKEVKDVKWHKQIPGCLVSTGTDGLNVWKTIS 510
Score = 206 (77.6 bits), Expect = 1.3e-26, Sum P(2) = 1.3e-26
Identities = 62/237 (26%), Positives = 107/237 (45%)
Query: 325 LQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNV--ISWNRTEPLI- 381
L WSP K A S D S +I+ T+ ++ P +++ ++ I W+RTE +
Sbjct: 279 LDWSPLIKTG-ALLSGDCSGQIYFTQRHTSRWVTDKQPFTVSNNKSIEDIQWSRTESTVF 337
Query: 382 VSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDL 441
+ G DG I +WD R KK + K V + W ASG + +WDL
Sbjct: 338 ATAGCDGYIRIWDTRS-KKHKPAISVKASNTDVNVISWSDKIGYLLASGDDNGTWGVWDL 396
Query: 442 ---------AVERDSEIEQREAELKDL---PSQLLFIHLGQKEIKELHWHPQLPGTIIST 489
AV+ ++ + + + + P + +G ++ W +
Sbjct: 397 RQFTPSNADAVQPVAQYDFHKGAITSIAFNPLDESIVAVGSEDNTVTLWDLSVEADDEEI 456
Query: 490 ANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISM 546
+ + ++P QLLF+H QKE+K++ WH Q+PG ++ST G N+++TIS+
Sbjct: 457 KQQAAET-KELQEIPPQLLFVHW-QKEVKDVKWHKQIPGCLVSTGTDGLNVWKTISV 511
Score = 183 (69.5 bits), Expect = 4.9e-24, Sum P(2) = 4.9e-24
Identities = 75/278 (26%), Positives = 117/278 (42%)
Query: 149 FQLAEHNKKRGKGPGIPTP-----PLFSFSGH-LTEGFAMDWSST-EPGVLATGDCKRNI 201
+ LA +K PG P P+ + H EG+ +DWS + G L +GDC I
Sbjct: 241 YNLAPQSKAFST-PGYQIPKSAKRPIHTVKNHGNVEGYGLDWSPLIKTGALLSGDCSGQI 299
Query: 202 HIWTPREAGAWQVDQKPLGGHTN-SAEDLQWSDLK-TALQTV--DDPFQLAEHNKKRGKG 257
+ +T R W D++P N S ED+QWS + T T D ++ + K+ K
Sbjct: 300 Y-FTQRHTSRWVTDKQPFTVSNNKSIEDIQWSRTESTVFATAGCDGYIRIWDTRSKKHK- 357
Query: 258 PGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIW-----TPREAGAWQ-VD 311
P S T+ + WS +LA+GD +W TP A A Q V
Sbjct: 358 ------PAISVKASNTDVNVISWSDKIGYLLASGDDNGTWGVWDLRQFTPSNADAVQPVA 411
Query: 312 QKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRV-----------INTKSCMLT 360
Q H ++ + ++P ++ ++A S D ++ +WD V TK
Sbjct: 412 QYDF--HKGAITSIAFNPLDESIVAVGSEDNTVTLWDLSVEADDEEIKQQAAETKELQEI 469
Query: 361 LPN---AH-TSDVNVISWNRTEP-LIVSGGDDGCIHVW 393
P H +V + W++ P +VS G DG ++VW
Sbjct: 470 PPQLLFVHWQKEVKDVKWHKQIPGCLVSTGTDG-LNVW 506
Score = 175 (66.7 bits), Expect = 3.3e-60, Sum P(2) = 3.3e-60
Identities = 42/124 (33%), Positives = 57/124 (45%)
Query: 12 LEASNDIVDNDSDEDMEQGXXXXXXXXXXXXXXXXXXXXRKVYLP--GTPLDKGESLVYD 69
+E D ND D D+ + +++YLP PL E L D
Sbjct: 56 IEIDGDDEINDED-DLRKKQEEAETLVQKDQSEGNKEKIQELYLPHMSRPLGPDEVLEAD 114
Query: 70 PSAYVMLHEAQTGAPCLSFDIIKDELGDERTAYPQTLYAVAGTQSKKFNFNRLIVMKMSN 129
P+ Y MLH PCL+ D+I D LG ER YPQ++ TQS + N L+V+ +SN
Sbjct: 115 PTVYEMLHNVNMPWPCLTLDVIPDTLGSERRNYPQSILLTTATQSSRKKENELMVLALSN 174
Query: 130 LTST 133
L T
Sbjct: 175 LAKT 178
Score = 116 (45.9 bits), Expect = 5.3e-17, Sum P(2) = 5.3e-17
Identities = 35/102 (34%), Positives = 46/102 (45%)
Query: 669 PGVLATGDCKRNIHIWTPREAGA-------WSVYLYTNRFGVLATGDCKRNIHIWTPREA 721
PG KR IH T + G WS + T G L +GDC I+ +T R
Sbjct: 253 PGYQIPKSAKRPIH--TVKNHGNVEGYGLDWSPLIKT---GALLSGDCSGQIY-FTQRHT 306
Query: 722 GAWQVDQKPL-VGHTNSVEDLQWSPGEKRVLASCSVDRSNRI 762
W D++P V + S+ED+QWS E V A+ D RI
Sbjct: 307 SRWVTDKQPFTVSNNKSIEDIQWSRTESTVFATAGCDGYIRI 348
Score = 86 (35.3 bits), Expect = 7.0e-14, Sum P(2) = 7.0e-14
Identities = 53/202 (26%), Positives = 77/202 (38%)
Query: 576 DPVMNSYFIRHRGCINRVRTCQYGSTT---LAGVWGEVGKVGIWDLKTALQTVDDP-FQL 631
DPV+ + I R NR++ + + L E G V I++L + P +Q+
Sbjct: 198 DPVIENENIPLRDTTNRLKVSPFAISNQEVLTATMSENGDVYIYNLAPQSKAFSTPGYQI 257
Query: 632 AEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSST-EPGVLATGDCKRNIHIWTPREAG 690
K K P I T G++ EG+ +DWS + G L +GDC I+ +T R
Sbjct: 258 P----KSAKRP-IHT---VKNHGNV-EGYGLDWSPLIKTGALLSGDCSGQIY-FTQRHTS 307
Query: 691 AWSV----YLYTNRFG------------VLATGDCKRNIHIWTPREAGAWQVDQKPLVGH 734
W + +N V AT C I IW R KP +
Sbjct: 308 RWVTDKQPFTVSNNKSIEDIQWSRTESTVFATAGCDGYIRIWDTRSK-----KHKPAISV 362
Query: 735 TNSVED---LQWSPGEKRVLAS 753
S D + WS +LAS
Sbjct: 363 KASNTDVNVISWSDKIGYLLAS 384
Score = 49 (22.3 bits), Expect = 4.7e-10, Sum P(2) = 4.7e-10
Identities = 24/100 (24%), Positives = 37/100 (37%)
Query: 586 HRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIP 645
H+G I + + +A V E V +WDL + Q AE + +
Sbjct: 416 HKGAITSIAFNPLDESIVA-VGSEDNTVTLWDLSVEADDEEIKQQAAETKELQ------E 468
Query: 646 TPPLFSFSGHLTEGFAMDWSSTEPGVL-ATGDCKRNIHIW 684
PP F E + W PG L +TG +++W
Sbjct: 469 IPPQLLFVHWQKEVKDVKWHKQIPGCLVSTGT--DGLNVW 506
Score = 43 (20.2 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 611 GKVGIWDLKTALQTVDDPFQ-LAEHNKKRGKGPGIPTPPL 649
G G+WDL+ + D Q +A+++ +G I PL
Sbjct: 389 GTWGVWDLRQFTPSNADAVQPVAQYDFHKGAITSIAFNPL 428
Score = 42 (19.8 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 11/41 (26%), Positives = 17/41 (41%)
Query: 648 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPRE 688
P S T+ + WS +LA+GD +W R+
Sbjct: 358 PAISVKASNTDVNVISWSDKIGYLLASGDDNGTWGVWDLRQ 398
>ASPGD|ASPL0000017699 [details] [associations]
symbol:AN8187 species:162425 "Emericella nidulans"
[GO:0000778 "condensed nuclear chromosome kinetochore"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0000070 "mitotic sister chromatid segregation"
evidence=IEA] [GO:0006995 "cellular response to nitrogen
starvation" evidence=IEA] [GO:0034501 "protein localization to
kinetochore" evidence=IEA] [GO:0031055 "chromatin remodeling at
centromere" evidence=IEA] [GO:0070317 "negative regulation of G0 to
G1 transition" evidence=IEA] [GO:0016575 "histone deacetylation"
evidence=IEA] [GO:0031066 "regulation of histone deacetylation at
centromere" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001302 OMA:CQPDLRL InterPro:IPR022052
Pfam:PF12265 EnsemblFungi:CADANIAT00004230 Uniprot:C8V748
Length = 411
Score = 315 (115.9 bits), Expect = 3.0e-27, P = 3.0e-27
Identities = 79/242 (32%), Positives = 118/242 (48%)
Query: 254 RGKGPGIPTP---PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQV 310
R K +PT P GH EGF + WS G LATG R++ +T V
Sbjct: 151 RSKHQSVPTGTVNPQMELLGHKQEGFGLSWSPHVAGHLATG---RDLTTYTKNNKALQPV 207
Query: 311 DQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVN 370
+ H++ V D+Q P ++ + S D++++I DTRV T T H +N
Sbjct: 208 --RTYTHHSSIVNDVQHHPLHSSLIGTVSDDITLQILDTRVAETTRAAATAEGQHRDAIN 265
Query: 371 VISWN-RTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFAS 429
I++N E ++ +G D I +WDLR K + + T ++HT VT++ WHP E + AS
Sbjct: 266 AIAFNPAAETVLATGSADKTIGLWDLRNLK--TKLHTLENHTDSVTSISWHPFEEAVLAS 323
Query: 430 GGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQ-KEIKELHWHPQLPGTIIS 488
D +I WDL+ R E EQ + +D P +LLF+H G I + W+ P + S
Sbjct: 324 ASYDRKIMFWDLS--RAGE-EQTPEDAQDGPPELLFMHGGHTNRISDFSWNLNDPWVLCS 380
Query: 489 TA 490
A
Sbjct: 381 AA 382
Score = 195 (73.7 bits), Expect = 3.4e-12, P = 3.4e-12
Identities = 68/252 (26%), Positives = 104/252 (41%)
Query: 158 RGKGPGIPTP---PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQV 214
R K +PT P GH EGF + WS G LATG R++ +T V
Sbjct: 151 RSKHQSVPTGTVNPQMELLGHKQEGFGLSWSPHVAGHLATG---RDLTTYTKNNKALQPV 207
Query: 215 DQKPLGGHTNSAEDLQWSDLKTAL-QTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLT 273
+ H++ D+Q L ++L TV D L + + + T + G
Sbjct: 208 --RTYTHHSSIVNDVQHHPLHSSLIGTVSDDITLQILDTRVAE----TTRAAATAEGQHR 261
Query: 274 EGF-AMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEK 332
+ A+ ++ VLATG + I +W R + L HT+SV + W P E+
Sbjct: 262 DAINAIAFNPAAETVLATGSADKTIGLWDLRNL---KTKLHTLENHTDSVTSISWHPFEE 318
Query: 333 RVLASCSVDLSIRIWDTRVINTKSC----------MLTLPNAHTSDVNVISWNRTEPLIV 382
VLAS S D I WD + +L + HT+ ++ SWN +P ++
Sbjct: 319 AVLASASYDRKIMFWDLSRAGEEQTPEDAQDGPPELLFMHGGHTNRISDFSWNLNDPWVL 378
Query: 383 -SGGDDGCIHVW 393
S +D + VW
Sbjct: 379 CSAAEDNLLQVW 390
Score = 144 (55.7 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 44/159 (27%), Positives = 77/159 (48%)
Query: 318 HTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR- 376
H +++ + ++P + VLA+ S D +I +WD R + TK + TL N HT V ISW+
Sbjct: 260 HRDAINAIAFNPAAETVLATGSADKTIGLWDLRNLKTK--LHTLEN-HTDSVTSISWHPF 316
Query: 377 TEPLIVSGGDDGCIHVWDLRRF---------KKGSSVATFKH--HTAPVTTVEWHPTESS 425
E ++ S D I WDL R + G F H HT ++ W+ +
Sbjct: 317 EEAVLASASYDRKIMFWDLSRAGEEQTPEDAQDGPPELLFMHGGHTNRISDFSWNLNDPW 376
Query: 426 TFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLL 464
S D+ + +W +A D+ + + +++D+P++ L
Sbjct: 377 VLCSAAEDNLLQVWKVA---DAIVGK---DMEDVPTEEL 409
Score = 96 (38.9 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 23/56 (41%), Positives = 29/56 (51%)
Query: 703 VLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDR 758
VLATG + I +W R + L HT+SV + W P E+ VLAS S DR
Sbjct: 276 VLATGSADKTIGLWDLRNL---KTKLHTLENHTDSVTSISWHPFEEAVLASASYDR 328
Score = 80 (33.2 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 22/70 (31%), Positives = 30/70 (42%)
Query: 638 RGKGPGIPTP---PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSV 694
R K +PT P GH EGF + WS G LATG R++ +T V
Sbjct: 151 RSKHQSVPTGTVNPQMELLGHKQEGFGLSWSPHVAGHLATG---RDLTTYTKNNKALQPV 207
Query: 695 YLYTNRFGVL 704
YT+ ++
Sbjct: 208 RTYTHHSSIV 217
Score = 40 (19.1 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 15/70 (21%), Positives = 30/70 (42%)
Query: 174 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKP-LGGHTNSAEDLQ-W 231
G + + M W ++ + TG + + ++ G + + P + GH + DL +
Sbjct: 139 GEVNKARVMIWDRSKHQSVPTGTVNPQMELLGHKQEG-FGLSWSPHVAGHLATGRDLTTY 197
Query: 232 SDLKTALQTV 241
+ ALQ V
Sbjct: 198 TKNNKALQPV 207
>UNIPROTKB|E9PC52 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 EMBL:AL929302 HGNC:HGNC:9890
ChiTaRS:RBBP7 IPI:IPI00879702 ProteinModelPortal:E9PC52 SMR:E9PC52
PRIDE:E9PC52 Ensembl:ENST00000404022 ArrayExpress:E9PC52
Bgee:E9PC52 Uniprot:E9PC52
Length = 416
Score = 312 (114.9 bits), Expect = 6.4e-27, P = 6.4e-27
Identities = 85/278 (30%), Positives = 132/278 (47%)
Query: 221 GHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGK-GPGIPTPPLFSFSGHLTEGFAMD 279
G N A + + A +T + ++ K K P P GH EG+ +
Sbjct: 115 GEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLS 174
Query: 280 WSSTEPGVLATGDCKRNIHIWT----PREAGAWQVDQKPL-VGHTNSVEDLQWSPGEKRV 334
W+S G L + + +W P+E VD K + GH+ VED+ W + +
Sbjct: 175 WNSNLSGHLLSASDDHTVCLWDINAGPKEGKI--VDAKAIFTGHSAVVEDVAWHLLHESL 232
Query: 335 LASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR-TEPLIVSGGDDGCIHVW 393
S + D + IWDTR NT S L +AHT++VN +S+N +E ++ +G D + +W
Sbjct: 233 FGSVADDQKLMIWDTRS-NTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 291
Query: 394 DLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQRE 453
DLR K + TF+ H + V W P + AS G D ++ +WDL+ + E EQ
Sbjct: 292 DLRNLKL--KLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS--KIGE-EQSA 346
Query: 454 AELKDLPSQLLFIHLGQK-EIKELHWHPQLPGTIISTA 490
+ +D P +LLFIH G +I + W+P P I S +
Sbjct: 347 EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVS 384
Score = 191 (72.3 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 60/258 (23%), Positives = 104/258 (40%)
Query: 160 KGPGIPTP-----PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWT----PREAG 210
K P P P P GH EG+ + W+S G L + + +W P+E
Sbjct: 146 KHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGK 205
Query: 211 AWQVDQKPL-GGHTNSAEDLQWSDLKTAL-QTVDDPFQLAEHNKKRGKGPGIPTPPLFSF 268
VD K + GH+ ED+ W L +L +V D +L + + + P
Sbjct: 206 I--VDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNT----TSKPSHLV 259
Query: 269 SGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWS 328
H E + ++ +LATG + + +W R ++ H + + + WS
Sbjct: 260 DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL---KLKLHTFESHKDEIFQVHWS 316
Query: 329 PGEKRVLASCSVDLSIRIWDTRVINTKSC----------MLTLPNAHTSDVNVISWNRTE 378
P + +LAS D + +WD I + +L + HT+ ++ SWN E
Sbjct: 317 PHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNE 376
Query: 379 PLIV-SGGDDGCIHVWDL 395
P ++ S +D + +W +
Sbjct: 377 PWVICSVSEDNIMQIWQM 394
Score = 168 (64.2 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 69/268 (25%), Positives = 109/268 (40%)
Query: 298 HIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSC 357
H P +G D + L GH L W+ L S S D ++ +WD +
Sbjct: 147 HPAKPDPSGECNPDLR-LRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGK 205
Query: 358 ML---TLPNAHTSDVNVISWNRT-EPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAP 413
++ + H++ V ++W+ E L S DD + +WD R HTA
Sbjct: 206 IVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAE 265
Query: 414 VTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEI 473
V + ++P A+G AD +ALWDL R +LK L + EI
Sbjct: 266 VNCLSFNPYSEFILATGSADKTVALWDL----------RNLKLK-----LHTFESHKDEI 310
Query: 474 KELHWHPQLPGTIISTANSG--FNIF-----------RTISDLPSQLLFIHLGQK-EIKE 519
++HW P TI++++ + N++ D P +LLFIH G +I +
Sbjct: 311 FQVHWSPHNE-TILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISD 369
Query: 520 LHWHPQLPGTIISTANSGFNIFRTISMS 547
W+P P I S + NI + M+
Sbjct: 370 FSWNPNEPWVICSVSED--NIMQIWQMA 395
>UNIPROTKB|K7GRD3 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GeneTree:ENSGT00570000079069 InterPro:IPR022052
Pfam:PF12265 EMBL:CU463287 Ensembl:ENSSSCT00000034836
Uniprot:K7GRD3
Length = 416
Score = 312 (114.9 bits), Expect = 6.4e-27, P = 6.4e-27
Identities = 85/278 (30%), Positives = 132/278 (47%)
Query: 221 GHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGK-GPGIPTPPLFSFSGHLTEGFAMD 279
G N A + + A +T + ++ K K P P GH EG+ +
Sbjct: 115 GEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLS 174
Query: 280 WSSTEPGVLATGDCKRNIHIWT----PREAGAWQVDQKPL-VGHTNSVEDLQWSPGEKRV 334
W+S G L + + +W P+E VD K + GH+ VED+ W + +
Sbjct: 175 WNSNLSGHLLSASDDHTVCLWDINAGPKEGKI--VDAKAIFTGHSAVVEDVAWHLLHESL 232
Query: 335 LASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR-TEPLIVSGGDDGCIHVW 393
S + D + IWDTR NT S L +AHT++VN +S+N +E ++ +G D + +W
Sbjct: 233 FGSVADDQKLMIWDTRS-NTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 291
Query: 394 DLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQRE 453
DLR K + TF+ H + V W P + AS G D ++ +WDL+ + E EQ
Sbjct: 292 DLRNLKL--KLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS--KIGE-EQSA 346
Query: 454 AELKDLPSQLLFIHLGQK-EIKELHWHPQLPGTIISTA 490
+ +D P +LLFIH G +I + W+P P I S +
Sbjct: 347 EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVS 384
Score = 191 (72.3 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 60/258 (23%), Positives = 104/258 (40%)
Query: 160 KGPGIPTP-----PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWT----PREAG 210
K P P P P GH EG+ + W+S G L + + +W P+E
Sbjct: 146 KHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGK 205
Query: 211 AWQVDQKPL-GGHTNSAEDLQWSDLKTAL-QTVDDPFQLAEHNKKRGKGPGIPTPPLFSF 268
VD K + GH+ ED+ W L +L +V D +L + + + P
Sbjct: 206 I--VDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNT----TSKPSHLV 259
Query: 269 SGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWS 328
H E + ++ +LATG + + +W R ++ H + + + WS
Sbjct: 260 DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL---KLKLHTFESHKDEIFQVHWS 316
Query: 329 PGEKRVLASCSVDLSIRIWDTRVINTKSC----------MLTLPNAHTSDVNVISWNRTE 378
P + +LAS D + +WD I + +L + HT+ ++ SWN E
Sbjct: 317 PHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNE 376
Query: 379 PLIV-SGGDDGCIHVWDL 395
P ++ S +D + +W +
Sbjct: 377 PWVICSVSEDNIMQIWQM 394
Score = 168 (64.2 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 69/268 (25%), Positives = 109/268 (40%)
Query: 298 HIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSC 357
H P +G D + L GH L W+ L S S D ++ +WD +
Sbjct: 147 HPAKPDPSGECNPDLR-LRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGK 205
Query: 358 ML---TLPNAHTSDVNVISWNRT-EPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAP 413
++ + H++ V ++W+ E L S DD + +WD R HTA
Sbjct: 206 IVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAE 265
Query: 414 VTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEI 473
V + ++P A+G AD +ALWDL R +LK L + EI
Sbjct: 266 VNCLSFNPYSEFILATGSADKTVALWDL----------RNLKLK-----LHTFESHKDEI 310
Query: 474 KELHWHPQLPGTIISTANSG--FNIF-----------RTISDLPSQLLFIHLGQK-EIKE 519
++HW P TI++++ + N++ D P +LLFIH G +I +
Sbjct: 311 FQVHWSPHNE-TILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISD 369
Query: 520 LHWHPQLPGTIISTANSGFNIFRTISMS 547
W+P P I S + NI + M+
Sbjct: 370 FSWNPNEPWVICSVSED--NIMQIWQMA 395
>UNIPROTKB|I3LKT8 [details] [associations]
symbol:RBBP4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042826 "histone deacetylase binding" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0033186 "CAF-1
complex" evidence=IEA] [GO:0031497 "chromatin assembly"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0016581
"NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 EMBL:FP312679
EMBL:FP325261 ProteinModelPortal:I3LKT8 PRIDE:I3LKT8
Ensembl:ENSSSCT00000023350 Uniprot:I3LKT8
Length = 390
Score = 311 (114.5 bits), Expect = 8.2e-27, P = 8.2e-27
Identities = 83/278 (29%), Positives = 132/278 (47%)
Query: 221 GHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGK-GPGIPTPPLFSFSGHLTEGFAMD 279
G N A + + A +T + ++ K K P P GH EG+ +
Sbjct: 90 GEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLS 149
Query: 280 WSSTEPGVLATGDCKRNIHIW----TPREAGAWQVDQKPL-VGHTNSVEDLQWSPGEKRV 334
W+ G L + I +W P+E VD K + GHT VED+ W + +
Sbjct: 150 WNPNLSGHLLSASDDHTICLWDISAVPKEGKV--VDAKTIFTGHTAVVEDVSWHLLHESL 207
Query: 335 LASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR-TEPLIVSGGDDGCIHVW 393
S + D + IWDTR NT ++ +AHT++VN +S+N +E ++ +G D + +W
Sbjct: 208 FGSVADDQKLMIWDTRSNNTSKPSHSV-DAHTAEVNCLSFNPYSEFILATGSADKTVALW 266
Query: 394 DLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQRE 453
DLR K + +F+ H + V+W P + AS G D ++ +WDL+ + E EQ
Sbjct: 267 DLRNLKL--KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLS--KIGE-EQSP 321
Query: 454 AELKDLPSQLLFIHLGQK-EIKELHWHPQLPGTIISTA 490
+ +D P +LLFIH G +I + W+P P I S +
Sbjct: 322 EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVS 359
Score = 207 (77.9 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 64/258 (24%), Positives = 105/258 (40%)
Query: 160 KGPGIPTP-----PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIW----TPREAG 210
K P P P P GH EG+ + W+ G L + I +W P+E
Sbjct: 121 KHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGK 180
Query: 211 AWQVDQKPL-GGHTNSAEDLQWSDLKTAL-QTVDDPFQLAEHNKKRGKGPGIPTPPLFSF 268
VD K + GHT ED+ W L +L +V D +L + + + P S
Sbjct: 181 V--VDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNN----TSKPSHSV 234
Query: 269 SGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWS 328
H E + ++ +LATG + + +W R ++ H + + +QWS
Sbjct: 235 DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL---KLKLHSFESHKDEIFQVQWS 291
Query: 329 PGEKRVLASCSVDLSIRIWDTRVINTKSC----------MLTLPNAHTSDVNVISWNRTE 378
P + +LAS D + +WD I + +L + HT+ ++ SWN E
Sbjct: 292 PHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNE 351
Query: 379 PLIV-SGGDDGCIHVWDL 395
P ++ S +D + VW +
Sbjct: 352 PWVICSVSEDNIMQVWQM 369
Score = 191 (72.3 bits), Expect = 8.3e-12, P = 8.3e-12
Identities = 74/268 (27%), Positives = 113/268 (42%)
Query: 298 HIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSC 357
H P +G D + L GH L W+P L S S D +I +WD + +
Sbjct: 122 HPSKPDPSGECNPDLR-LRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGK 180
Query: 358 ML---TLPNAHTSDVNVISWNRT-EPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAP 413
++ T+ HT+ V +SW+ E L S DD + +WD R + HTA
Sbjct: 181 VVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAE 240
Query: 414 VTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEI 473
V + ++P A+G AD +ALWDL R +LK L S + EI
Sbjct: 241 VNCLSFNPYSEFILATGSADKTVALWDL----------RNLKLK-LHS----FESHKDEI 285
Query: 474 KELHWHPQLPGTIISTANSG--FNIF-----------RTISDLPSQLLFIHLGQK-EIKE 519
++ W P TI++++ + N++ D P +LLFIH G +I +
Sbjct: 286 FQVQWSPHNE-TILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISD 344
Query: 520 LHWHPQLPGTIISTANSGFNIFRTISMS 547
W+P P I S + NI + M+
Sbjct: 345 FSWNPNEPWVICSVSED--NIMQVWQMA 370
>UNIPROTKB|Q3SWX8 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9913
"Bos taurus" [GO:0016581 "NuRD complex" evidence=ISS] [GO:0030308
"negative regulation of cell growth" evidence=ISS] [GO:0070370
"cellular heat acclimation" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 OMA:DGFLLHV HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC104613 IPI:IPI00709403
RefSeq:NP_001029810.1 UniGene:Bt.4908 ProteinModelPortal:Q3SWX8
SMR:Q3SWX8 STRING:Q3SWX8 PRIDE:Q3SWX8 Ensembl:ENSBTAT00000029923
GeneID:537402 KEGG:bta:537402 CTD:5931 InParanoid:Q3SWX8 KO:K11659
NextBio:20877129 Uniprot:Q3SWX8
Length = 425
Score = 312 (114.9 bits), Expect = 1.3e-26, P = 1.3e-26
Identities = 85/278 (30%), Positives = 132/278 (47%)
Query: 221 GHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGK-GPGIPTPPLFSFSGHLTEGFAMD 279
G N A + + A +T + ++ K K P P GH EG+ +
Sbjct: 124 GEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLS 183
Query: 280 WSSTEPGVLATGDCKRNIHIWT----PREAGAWQVDQKPL-VGHTNSVEDLQWSPGEKRV 334
W+S G L + + +W P+E VD K + GH+ VED+ W + +
Sbjct: 184 WNSNLSGHLLSASDDHTVCLWDINAGPKEGKI--VDAKAIFTGHSAVVEDVAWHLLHESL 241
Query: 335 LASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR-TEPLIVSGGDDGCIHVW 393
S + D + IWDTR NT S L +AHT++VN +S+N +E ++ +G D + +W
Sbjct: 242 FGSVADDQKLMIWDTRS-NTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 300
Query: 394 DLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQRE 453
DLR K + TF+ H + V W P + AS G D ++ +WDL+ + E EQ
Sbjct: 301 DLRNLKL--KLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS--KIGE-EQSA 355
Query: 454 AELKDLPSQLLFIHLGQK-EIKELHWHPQLPGTIISTA 490
+ +D P +LLFIH G +I + W+P P I S +
Sbjct: 356 EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVS 393
Score = 191 (72.3 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 60/258 (23%), Positives = 104/258 (40%)
Query: 160 KGPGIPTP-----PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWT----PREAG 210
K P P P P GH EG+ + W+S G L + + +W P+E
Sbjct: 155 KHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGK 214
Query: 211 AWQVDQKPL-GGHTNSAEDLQWSDLKTAL-QTVDDPFQLAEHNKKRGKGPGIPTPPLFSF 268
VD K + GH+ ED+ W L +L +V D +L + + + P
Sbjct: 215 I--VDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNT----TSKPSHLV 268
Query: 269 SGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWS 328
H E + ++ +LATG + + +W R ++ H + + + WS
Sbjct: 269 DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL---KLKLHTFESHKDEIFQVHWS 325
Query: 329 PGEKRVLASCSVDLSIRIWDTRVINTKSC----------MLTLPNAHTSDVNVISWNRTE 378
P + +LAS D + +WD I + +L + HT+ ++ SWN E
Sbjct: 326 PHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNE 385
Query: 379 PLIV-SGGDDGCIHVWDL 395
P ++ S +D + +W +
Sbjct: 386 PWVICSVSEDNIMQIWQM 403
Score = 168 (64.2 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 69/268 (25%), Positives = 109/268 (40%)
Query: 298 HIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSC 357
H P +G D + L GH L W+ L S S D ++ +WD +
Sbjct: 156 HPAKPDPSGECNPDLR-LRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGK 214
Query: 358 ML---TLPNAHTSDVNVISWNRT-EPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAP 413
++ + H++ V ++W+ E L S DD + +WD R HTA
Sbjct: 215 IVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAE 274
Query: 414 VTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEI 473
V + ++P A+G AD +ALWDL R +LK L + EI
Sbjct: 275 VNCLSFNPYSEFILATGSADKTVALWDL----------RNLKLK-----LHTFESHKDEI 319
Query: 474 KELHWHPQLPGTIISTANSG--FNIF-----------RTISDLPSQLLFIHLGQK-EIKE 519
++HW P TI++++ + N++ D P +LLFIH G +I +
Sbjct: 320 FQVHWSPHNE-TILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISD 378
Query: 520 LHWHPQLPGTIISTANSGFNIFRTISMS 547
W+P P I S + NI + M+
Sbjct: 379 FSWNPNEPWVICSVSED--NIMQIWQMA 404
>UNIPROTKB|E2RM49 [details] [associations]
symbol:RBBP7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
CTD:5931 KO:K11659 EMBL:AAEX03026166 RefSeq:XP_857851.1
ProteinModelPortal:E2RM49 Ensembl:ENSCAFT00000020249 GeneID:480854
KEGG:cfa:480854 NextBio:20855780 Uniprot:E2RM49
Length = 425
Score = 312 (114.9 bits), Expect = 1.3e-26, P = 1.3e-26
Identities = 85/278 (30%), Positives = 132/278 (47%)
Query: 221 GHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGK-GPGIPTPPLFSFSGHLTEGFAMD 279
G N A + + A +T + ++ K K P P GH EG+ +
Sbjct: 124 GEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLS 183
Query: 280 WSSTEPGVLATGDCKRNIHIWT----PREAGAWQVDQKPL-VGHTNSVEDLQWSPGEKRV 334
W+S G L + + +W P+E VD K + GH+ VED+ W + +
Sbjct: 184 WNSNLSGHLLSASDDHTVCLWDINAGPKEGKI--VDAKAIFTGHSAVVEDVAWHLLHESL 241
Query: 335 LASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR-TEPLIVSGGDDGCIHVW 393
S + D + IWDTR NT S L +AHT++VN +S+N +E ++ +G D + +W
Sbjct: 242 FGSVADDQKLMIWDTRS-NTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 300
Query: 394 DLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQRE 453
DLR K + TF+ H + V W P + AS G D ++ +WDL+ + E EQ
Sbjct: 301 DLRNLKL--KLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS--KIGE-EQSA 355
Query: 454 AELKDLPSQLLFIHLGQK-EIKELHWHPQLPGTIISTA 490
+ +D P +LLFIH G +I + W+P P I S +
Sbjct: 356 EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVS 393
Score = 191 (72.3 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 60/258 (23%), Positives = 104/258 (40%)
Query: 160 KGPGIPTP-----PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWT----PREAG 210
K P P P P GH EG+ + W+S G L + + +W P+E
Sbjct: 155 KHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGK 214
Query: 211 AWQVDQKPL-GGHTNSAEDLQWSDLKTAL-QTVDDPFQLAEHNKKRGKGPGIPTPPLFSF 268
VD K + GH+ ED+ W L +L +V D +L + + + P
Sbjct: 215 I--VDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNT----TSKPSHLV 268
Query: 269 SGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWS 328
H E + ++ +LATG + + +W R ++ H + + + WS
Sbjct: 269 DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL---KLKLHTFESHKDEIFQVHWS 325
Query: 329 PGEKRVLASCSVDLSIRIWDTRVINTKSC----------MLTLPNAHTSDVNVISWNRTE 378
P + +LAS D + +WD I + +L + HT+ ++ SWN E
Sbjct: 326 PHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNE 385
Query: 379 PLIV-SGGDDGCIHVWDL 395
P ++ S +D + +W +
Sbjct: 386 PWVICSVSEDNIMQIWQM 403
Score = 168 (64.2 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 69/268 (25%), Positives = 109/268 (40%)
Query: 298 HIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSC 357
H P +G D + L GH L W+ L S S D ++ +WD +
Sbjct: 156 HPAKPDPSGECNPDLR-LRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGK 214
Query: 358 ML---TLPNAHTSDVNVISWNRT-EPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAP 413
++ + H++ V ++W+ E L S DD + +WD R HTA
Sbjct: 215 IVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAE 274
Query: 414 VTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEI 473
V + ++P A+G AD +ALWDL R +LK L + EI
Sbjct: 275 VNCLSFNPYSEFILATGSADKTVALWDL----------RNLKLK-----LHTFESHKDEI 319
Query: 474 KELHWHPQLPGTIISTANSG--FNIF-----------RTISDLPSQLLFIHLGQK-EIKE 519
++HW P TI++++ + N++ D P +LLFIH G +I +
Sbjct: 320 FQVHWSPHNE-TILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISD 378
Query: 520 LHWHPQLPGTIISTANSGFNIFRTISMS 547
W+P P I S + NI + M+
Sbjct: 379 FSWNPNEPWVICSVSED--NIMQIWQMA 404
>UNIPROTKB|Q16576 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9606
"Homo sapiens" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=IDA] [GO:0030308 "negative regulation of cell growth"
evidence=IDA] [GO:0035098 "ESC/E(Z) complex" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070370 "cellular
heat acclimation" evidence=IDA] [GO:0007275 "multicellular
organismal development" evidence=TAS] [GO:0008283 "cell
proliferation" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006334 "nucleosome assembly" evidence=TAS]
[GO:0034080 "CENP-A containing nucleosome assembly at centromere"
evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0007275
Pathway_Interaction_DB:telomerasepathway Reactome:REACT_115566
GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122
GO:GO:0035098 Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0034080
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 PDB:3CFS PDB:3CFV
PDBsum:3CFS PDBsum:3CFV HOGENOM:HOG000160330 OMA:DGFLLHV
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:U35143
EMBL:X72841 EMBL:AK091911 EMBL:AL929302 IPI:IPI00395865
IPI:IPI00646512 PIR:I39181 RefSeq:NP_001185648.1 RefSeq:NP_002884.1
UniGene:Hs.495755 ProteinModelPortal:Q16576 SMR:Q16576 DIP:DIP-436N
IntAct:Q16576 MINT:MINT-90512 STRING:Q16576 PhosphoSite:Q16576
DMDM:2494891 PaxDb:Q16576 PeptideAtlas:Q16576 PRIDE:Q16576
Ensembl:ENST00000380084 Ensembl:ENST00000380087 GeneID:5931
KEGG:hsa:5931 UCSC:uc004cxt.3 GeneCards:GC0XM016772 HGNC:HGNC:9890
HPA:CAB037084 MIM:300825 neXtProt:NX_Q16576 PharmGKB:PA34254
PhylomeDB:Q16576 ChiTaRS:RBBP7 EvolutionaryTrace:Q16576
GenomeRNAi:5931 NextBio:23110 PMAP-CutDB:Q16576 ArrayExpress:Q16576
Bgee:Q16576 CleanEx:HS_RBBP7 Genevestigator:Q16576
GermOnline:ENSG00000102054 Uniprot:Q16576
Length = 425
Score = 312 (114.9 bits), Expect = 1.3e-26, P = 1.3e-26
Identities = 85/278 (30%), Positives = 132/278 (47%)
Query: 221 GHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGK-GPGIPTPPLFSFSGHLTEGFAMD 279
G N A + + A +T + ++ K K P P GH EG+ +
Sbjct: 124 GEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLS 183
Query: 280 WSSTEPGVLATGDCKRNIHIWT----PREAGAWQVDQKPL-VGHTNSVEDLQWSPGEKRV 334
W+S G L + + +W P+E VD K + GH+ VED+ W + +
Sbjct: 184 WNSNLSGHLLSASDDHTVCLWDINAGPKEGKI--VDAKAIFTGHSAVVEDVAWHLLHESL 241
Query: 335 LASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR-TEPLIVSGGDDGCIHVW 393
S + D + IWDTR NT S L +AHT++VN +S+N +E ++ +G D + +W
Sbjct: 242 FGSVADDQKLMIWDTRS-NTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 300
Query: 394 DLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQRE 453
DLR K + TF+ H + V W P + AS G D ++ +WDL+ + E EQ
Sbjct: 301 DLRNLKL--KLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS--KIGE-EQSA 355
Query: 454 AELKDLPSQLLFIHLGQK-EIKELHWHPQLPGTIISTA 490
+ +D P +LLFIH G +I + W+P P I S +
Sbjct: 356 EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVS 393
Score = 191 (72.3 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 60/258 (23%), Positives = 104/258 (40%)
Query: 160 KGPGIPTP-----PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWT----PREAG 210
K P P P P GH EG+ + W+S G L + + +W P+E
Sbjct: 155 KHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGK 214
Query: 211 AWQVDQKPL-GGHTNSAEDLQWSDLKTAL-QTVDDPFQLAEHNKKRGKGPGIPTPPLFSF 268
VD K + GH+ ED+ W L +L +V D +L + + + P
Sbjct: 215 I--VDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNT----TSKPSHLV 268
Query: 269 SGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWS 328
H E + ++ +LATG + + +W R ++ H + + + WS
Sbjct: 269 DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL---KLKLHTFESHKDEIFQVHWS 325
Query: 329 PGEKRVLASCSVDLSIRIWDTRVINTKSC----------MLTLPNAHTSDVNVISWNRTE 378
P + +LAS D + +WD I + +L + HT+ ++ SWN E
Sbjct: 326 PHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNE 385
Query: 379 PLIV-SGGDDGCIHVWDL 395
P ++ S +D + +W +
Sbjct: 386 PWVICSVSEDNIMQIWQM 403
Score = 168 (64.2 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 69/268 (25%), Positives = 109/268 (40%)
Query: 298 HIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSC 357
H P +G D + L GH L W+ L S S D ++ +WD +
Sbjct: 156 HPAKPDPSGECNPDLR-LRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGK 214
Query: 358 ML---TLPNAHTSDVNVISWNRT-EPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAP 413
++ + H++ V ++W+ E L S DD + +WD R HTA
Sbjct: 215 IVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAE 274
Query: 414 VTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEI 473
V + ++P A+G AD +ALWDL R +LK L + EI
Sbjct: 275 VNCLSFNPYSEFILATGSADKTVALWDL----------RNLKLK-----LHTFESHKDEI 319
Query: 474 KELHWHPQLPGTIISTANSG--FNIF-----------RTISDLPSQLLFIHLGQK-EIKE 519
++HW P TI++++ + N++ D P +LLFIH G +I +
Sbjct: 320 FQVHWSPHNE-TILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISD 378
Query: 520 LHWHPQLPGTIISTANSGFNIFRTISMS 547
W+P P I S + NI + M+
Sbjct: 379 FSWNPNEPWVICSVSED--NIMQIWQMA 404
>UNIPROTKB|F1SQR0 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0070370 "cellular heat acclimation" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000122 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 KO:K11659 EMBL:CU463287 RefSeq:XP_003135004.1
ProteinModelPortal:F1SQR0 Ensembl:ENSSSCT00000013288
GeneID:100519001 KEGG:ssc:100519001 Uniprot:F1SQR0
Length = 425
Score = 312 (114.9 bits), Expect = 1.3e-26, P = 1.3e-26
Identities = 85/278 (30%), Positives = 132/278 (47%)
Query: 221 GHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGK-GPGIPTPPLFSFSGHLTEGFAMD 279
G N A + + A +T + ++ K K P P GH EG+ +
Sbjct: 124 GEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLS 183
Query: 280 WSSTEPGVLATGDCKRNIHIWT----PREAGAWQVDQKPL-VGHTNSVEDLQWSPGEKRV 334
W+S G L + + +W P+E VD K + GH+ VED+ W + +
Sbjct: 184 WNSNLSGHLLSASDDHTVCLWDINAGPKEGKI--VDAKAIFTGHSAVVEDVAWHLLHESL 241
Query: 335 LASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR-TEPLIVSGGDDGCIHVW 393
S + D + IWDTR NT S L +AHT++VN +S+N +E ++ +G D + +W
Sbjct: 242 FGSVADDQKLMIWDTRS-NTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 300
Query: 394 DLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQRE 453
DLR K + TF+ H + V W P + AS G D ++ +WDL+ + E EQ
Sbjct: 301 DLRNLKL--KLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS--KIGE-EQSA 355
Query: 454 AELKDLPSQLLFIHLGQK-EIKELHWHPQLPGTIISTA 490
+ +D P +LLFIH G +I + W+P P I S +
Sbjct: 356 EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVS 393
Score = 191 (72.3 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 60/258 (23%), Positives = 104/258 (40%)
Query: 160 KGPGIPTP-----PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWT----PREAG 210
K P P P P GH EG+ + W+S G L + + +W P+E
Sbjct: 155 KHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGK 214
Query: 211 AWQVDQKPL-GGHTNSAEDLQWSDLKTAL-QTVDDPFQLAEHNKKRGKGPGIPTPPLFSF 268
VD K + GH+ ED+ W L +L +V D +L + + + P
Sbjct: 215 I--VDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNT----TSKPSHLV 268
Query: 269 SGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWS 328
H E + ++ +LATG + + +W R ++ H + + + WS
Sbjct: 269 DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL---KLKLHTFESHKDEIFQVHWS 325
Query: 329 PGEKRVLASCSVDLSIRIWDTRVINTKSC----------MLTLPNAHTSDVNVISWNRTE 378
P + +LAS D + +WD I + +L + HT+ ++ SWN E
Sbjct: 326 PHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNE 385
Query: 379 PLIV-SGGDDGCIHVWDL 395
P ++ S +D + +W +
Sbjct: 386 PWVICSVSEDNIMQIWQM 403
Score = 168 (64.2 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 69/268 (25%), Positives = 109/268 (40%)
Query: 298 HIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSC 357
H P +G D + L GH L W+ L S S D ++ +WD +
Sbjct: 156 HPAKPDPSGECNPDLR-LRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGK 214
Query: 358 ML---TLPNAHTSDVNVISWNRT-EPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAP 413
++ + H++ V ++W+ E L S DD + +WD R HTA
Sbjct: 215 IVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAE 274
Query: 414 VTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEI 473
V + ++P A+G AD +ALWDL R +LK L + EI
Sbjct: 275 VNCLSFNPYSEFILATGSADKTVALWDL----------RNLKLK-----LHTFESHKDEI 319
Query: 474 KELHWHPQLPGTIISTANSG--FNIF-----------RTISDLPSQLLFIHLGQK-EIKE 519
++HW P TI++++ + N++ D P +LLFIH G +I +
Sbjct: 320 FQVHWSPHNE-TILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISD 378
Query: 520 LHWHPQLPGTIISTANSGFNIFRTISMS 547
W+P P I S + NI + M+
Sbjct: 379 FSWNPNEPWVICSVSED--NIMQIWQMA 404
>UNIPROTKB|Q4R304 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9541
"Macaca fascicularis" [GO:0016581 "NuRD complex" evidence=ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISS]
[GO:0035098 "ESC/E(Z) complex" evidence=ISS] [GO:0070370 "cellular
heat acclimation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0030308 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0035098 GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 HOVERGEN:HBG053236
EMBL:AB179464 ProteinModelPortal:Q4R304 SMR:Q4R304 PRIDE:Q4R304
Uniprot:Q4R304
Length = 425
Score = 312 (114.9 bits), Expect = 1.3e-26, P = 1.3e-26
Identities = 85/278 (30%), Positives = 132/278 (47%)
Query: 221 GHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGK-GPGIPTPPLFSFSGHLTEGFAMD 279
G N A + + A +T + ++ K K P P GH EG+ +
Sbjct: 124 GEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLS 183
Query: 280 WSSTEPGVLATGDCKRNIHIWT----PREAGAWQVDQKPL-VGHTNSVEDLQWSPGEKRV 334
W+S G L + + +W P+E VD K + GH+ VED+ W + +
Sbjct: 184 WNSNLSGHLLSASDDHTVCLWDINAGPKEGKI--VDAKAIFTGHSAVVEDVAWHLLHESL 241
Query: 335 LASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR-TEPLIVSGGDDGCIHVW 393
S + D + IWDTR NT S L +AHT++VN +S+N +E ++ +G D + +W
Sbjct: 242 FGSVADDQKLMIWDTRS-NTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 300
Query: 394 DLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQRE 453
DLR K + TF+ H + V W P + AS G D ++ +WDL+ + E EQ
Sbjct: 301 DLRNLKL--KLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS--KIGE-EQSA 355
Query: 454 AELKDLPSQLLFIHLGQK-EIKELHWHPQLPGTIISTA 490
+ +D P +LLFIH G +I + W+P P I S +
Sbjct: 356 EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVS 393
Score = 191 (72.3 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 60/258 (23%), Positives = 104/258 (40%)
Query: 160 KGPGIPTP-----PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWT----PREAG 210
K P P P P GH EG+ + W+S G L + + +W P+E
Sbjct: 155 KHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGK 214
Query: 211 AWQVDQKPL-GGHTNSAEDLQWSDLKTAL-QTVDDPFQLAEHNKKRGKGPGIPTPPLFSF 268
VD K + GH+ ED+ W L +L +V D +L + + + P
Sbjct: 215 I--VDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNT----TSKPSHLV 268
Query: 269 SGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWS 328
H E + ++ +LATG + + +W R ++ H + + + WS
Sbjct: 269 DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL---KLKLHTFESHKDEIFQVHWS 325
Query: 329 PGEKRVLASCSVDLSIRIWDTRVINTKSC----------MLTLPNAHTSDVNVISWNRTE 378
P + +LAS D + +WD I + +L + HT+ ++ SWN E
Sbjct: 326 PHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNE 385
Query: 379 PLIV-SGGDDGCIHVWDL 395
P ++ S +D + +W +
Sbjct: 386 PWVICSVSEDNIMQIWQM 403
Score = 168 (64.2 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 69/268 (25%), Positives = 109/268 (40%)
Query: 298 HIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSC 357
H P +G D + L GH L W+ L S S D ++ +WD +
Sbjct: 156 HPAKPDPSGECNPDLR-LRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGK 214
Query: 358 ML---TLPNAHTSDVNVISWNRT-EPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAP 413
++ + H++ V ++W+ E L S DD + +WD R HTA
Sbjct: 215 IVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAE 274
Query: 414 VTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEI 473
V + ++P A+G AD +ALWDL R +LK L + EI
Sbjct: 275 VNCLSFNPYSEFILATGSADKTVALWDL----------RNLKLK-----LHTFESHKDEI 319
Query: 474 KELHWHPQLPGTIISTANSG--FNIF-----------RTISDLPSQLLFIHLGQK-EIKE 519
++HW P TI++++ + N++ D P +LLFIH G +I +
Sbjct: 320 FQVHWSPHNE-TILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISD 378
Query: 520 LHWHPQLPGTIISTANSGFNIFRTISMS 547
W+P P I S + NI + M+
Sbjct: 379 FSWNPNEPWVICSVSED--NIMQIWQMA 404
>MGI|MGI:1194910 [details] [associations]
symbol:Rbbp7 "retinoblastoma binding protein 7"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=TAS] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016581
"NuRD complex" evidence=ISO;IDA] [GO:0030308 "negative regulation
of cell growth" evidence=ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0070370 "cellular heat
acclimation" evidence=ISO;ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1194910 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338 GO:GO:0000122
GO:GO:0035098 GeneTree:ENSGT00570000079069 GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 HOGENOM:HOG000160330
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:U35142
EMBL:AK076016 EMBL:AK135779 EMBL:AK135956 EMBL:AK136110
EMBL:AK145531 EMBL:AK145651 EMBL:AK146014 EMBL:AK146904
EMBL:AK146967 EMBL:AK147062 EMBL:AK148852 EMBL:AK153913
EMBL:AK160023 EMBL:AL672123 EMBL:BC003785 IPI:IPI00122698
PIR:I49367 RefSeq:NP_033057.3 UniGene:Mm.270186 UniGene:Mm.486181
ProteinModelPortal:Q60973 SMR:Q60973 IntAct:Q60973 STRING:Q60973
PhosphoSite:Q60973 REPRODUCTION-2DPAGE:Q60973 PaxDb:Q60973
PRIDE:Q60973 Ensembl:ENSMUST00000033720 GeneID:245688
KEGG:mmu:245688 InParanoid:A2AFJ0 NextBio:386918 Bgee:Q60973
CleanEx:MM_RBBP7 Genevestigator:Q60973
GermOnline:ENSMUSG00000031353 Uniprot:Q60973
Length = 425
Score = 312 (114.9 bits), Expect = 1.3e-26, P = 1.3e-26
Identities = 85/278 (30%), Positives = 132/278 (47%)
Query: 221 GHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGK-GPGIPTPPLFSFSGHLTEGFAMD 279
G N A + + A +T + ++ K K P P GH EG+ +
Sbjct: 124 GEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLS 183
Query: 280 WSSTEPGVLATGDCKRNIHIWT----PREAGAWQVDQKPL-VGHTNSVEDLQWSPGEKRV 334
W+S G L + + +W P+E VD K + GH+ VED+ W + +
Sbjct: 184 WNSNLSGHLLSASDDHTVCLWDINAGPKEGKI--VDAKAIFTGHSAVVEDVAWHLLHESL 241
Query: 335 LASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR-TEPLIVSGGDDGCIHVW 393
S + D + IWDTR NT S L +AHT++VN +S+N +E ++ +G D + +W
Sbjct: 242 FGSVADDQKLMIWDTRS-NTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 300
Query: 394 DLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQRE 453
DLR K + TF+ H + V W P + AS G D ++ +WDL+ + E EQ
Sbjct: 301 DLRNLKL--KLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS--KIGE-EQSA 355
Query: 454 AELKDLPSQLLFIHLGQK-EIKELHWHPQLPGTIISTA 490
+ +D P +LLFIH G +I + W+P P I S +
Sbjct: 356 EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVS 393
Score = 191 (72.3 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 60/258 (23%), Positives = 104/258 (40%)
Query: 160 KGPGIPTP-----PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWT----PREAG 210
K P P P P GH EG+ + W+S G L + + +W P+E
Sbjct: 155 KHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGK 214
Query: 211 AWQVDQKPL-GGHTNSAEDLQWSDLKTAL-QTVDDPFQLAEHNKKRGKGPGIPTPPLFSF 268
VD K + GH+ ED+ W L +L +V D +L + + + P
Sbjct: 215 I--VDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNT----TSKPSHLV 268
Query: 269 SGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWS 328
H E + ++ +LATG + + +W R ++ H + + + WS
Sbjct: 269 DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL---KLKLHTFESHKDEIFQVHWS 325
Query: 329 PGEKRVLASCSVDLSIRIWDTRVINTKSC----------MLTLPNAHTSDVNVISWNRTE 378
P + +LAS D + +WD I + +L + HT+ ++ SWN E
Sbjct: 326 PHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNE 385
Query: 379 PLIV-SGGDDGCIHVWDL 395
P ++ S +D + +W +
Sbjct: 386 PWVICSVSEDNIMQIWQM 403
Score = 168 (64.2 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 69/268 (25%), Positives = 109/268 (40%)
Query: 298 HIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSC 357
H P +G D + L GH L W+ L S S D ++ +WD +
Sbjct: 156 HPAKPDPSGECNPDLR-LRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGK 214
Query: 358 ML---TLPNAHTSDVNVISWNRT-EPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAP 413
++ + H++ V ++W+ E L S DD + +WD R HTA
Sbjct: 215 IVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAE 274
Query: 414 VTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEI 473
V + ++P A+G AD +ALWDL R +LK L + EI
Sbjct: 275 VNCLSFNPYSEFILATGSADKTVALWDL----------RNLKLK-----LHTFESHKDEI 319
Query: 474 KELHWHPQLPGTIISTANSG--FNIF-----------RTISDLPSQLLFIHLGQK-EIKE 519
++HW P TI++++ + N++ D P +LLFIH G +I +
Sbjct: 320 FQVHWSPHNE-TILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISD 378
Query: 520 LHWHPQLPGTIISTANSGFNIFRTISMS 547
W+P P I S + NI + M+
Sbjct: 379 FSWNPNEPWVICSVSED--NIMQIWQMA 404
>RGD|620125 [details] [associations]
symbol:Rbbp7 "retinoblastoma binding protein 7" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=ISO;ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISO;ISS]
[GO:0035098 "ESC/E(Z) complex" evidence=ISO;ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0070370 "cellular heat acclimation" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:620125 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931
KO:K11659 EMBL:AF090306 EMBL:BC062012 IPI:IPI00194285
RefSeq:NP_114004.1 UniGene:Rn.3600 ProteinModelPortal:Q71UF4
SMR:Q71UF4 STRING:Q71UF4 PRIDE:Q71UF4 Ensembl:ENSRNOT00000066676
GeneID:83712 KEGG:rno:83712 UCSC:RGD:620125 InParanoid:Q71UF4
NextBio:616281 ArrayExpress:Q71UF4 Genevestigator:Q71UF4
GermOnline:ENSRNOG00000005157 Uniprot:Q71UF4
Length = 425
Score = 312 (114.9 bits), Expect = 1.3e-26, P = 1.3e-26
Identities = 85/278 (30%), Positives = 132/278 (47%)
Query: 221 GHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGK-GPGIPTPPLFSFSGHLTEGFAMD 279
G N A + + A +T + ++ K K P P GH EG+ +
Sbjct: 124 GEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLS 183
Query: 280 WSSTEPGVLATGDCKRNIHIWT----PREAGAWQVDQKPL-VGHTNSVEDLQWSPGEKRV 334
W+S G L + + +W P+E VD K + GH+ VED+ W + +
Sbjct: 184 WNSNLSGHLLSASDDHTVCLWDINAGPKEGKI--VDAKAIFTGHSAVVEDVAWHLLHESL 241
Query: 335 LASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR-TEPLIVSGGDDGCIHVW 393
S + D + IWDTR NT S L +AHT++VN +S+N +E ++ +G D + +W
Sbjct: 242 FGSVADDQKLMIWDTRS-NTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 300
Query: 394 DLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQRE 453
DLR K + TF+ H + V W P + AS G D ++ +WDL+ + E EQ
Sbjct: 301 DLRNLKL--KLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS--KIGE-EQSA 355
Query: 454 AELKDLPSQLLFIHLGQK-EIKELHWHPQLPGTIISTA 490
+ +D P +LLFIH G +I + W+P P I S +
Sbjct: 356 EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVS 393
Score = 191 (72.3 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 60/258 (23%), Positives = 104/258 (40%)
Query: 160 KGPGIPTP-----PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWT----PREAG 210
K P P P P GH EG+ + W+S G L + + +W P+E
Sbjct: 155 KHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGK 214
Query: 211 AWQVDQKPL-GGHTNSAEDLQWSDLKTAL-QTVDDPFQLAEHNKKRGKGPGIPTPPLFSF 268
VD K + GH+ ED+ W L +L +V D +L + + + P
Sbjct: 215 I--VDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNT----TSKPSHLV 268
Query: 269 SGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWS 328
H E + ++ +LATG + + +W R ++ H + + + WS
Sbjct: 269 DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL---KLKLHTFESHKDEIFQVHWS 325
Query: 329 PGEKRVLASCSVDLSIRIWDTRVINTKSC----------MLTLPNAHTSDVNVISWNRTE 378
P + +LAS D + +WD I + +L + HT+ ++ SWN E
Sbjct: 326 PHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNE 385
Query: 379 PLIV-SGGDDGCIHVWDL 395
P ++ S +D + +W +
Sbjct: 386 PWVICSVSEDNIMQIWQM 403
Score = 168 (64.2 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 69/268 (25%), Positives = 109/268 (40%)
Query: 298 HIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSC 357
H P +G D + L GH L W+ L S S D ++ +WD +
Sbjct: 156 HPAKPDPSGECNPDLR-LRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGK 214
Query: 358 ML---TLPNAHTSDVNVISWNRT-EPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAP 413
++ + H++ V ++W+ E L S DD + +WD R HTA
Sbjct: 215 IVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAE 274
Query: 414 VTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEI 473
V + ++P A+G AD +ALWDL R +LK L + EI
Sbjct: 275 VNCLSFNPYSEFILATGSADKTVALWDL----------RNLKLK-----LHTFESHKDEI 319
Query: 474 KELHWHPQLPGTIISTANSG--FNIF-----------RTISDLPSQLLFIHLGQK-EIKE 519
++HW P TI++++ + N++ D P +LLFIH G +I +
Sbjct: 320 FQVHWSPHNE-TILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISD 378
Query: 520 LHWHPQLPGTIISTANSGFNIFRTISMS 547
W+P P I S + NI + M+
Sbjct: 379 FSWNPNEPWVICSVSED--NIMQIWQMA 404
>FB|FBgn0263979 [details] [associations]
symbol:Caf1 "Chromatin assembly factor 1 subunit"
species:7227 "Drosophila melanogaster" [GO:0016584 "nucleosome
positioning" evidence=IDA] [GO:0042826 "histone deacetylase
binding" evidence=ISS;IDA] [GO:0031497 "chromatin assembly"
evidence=ISS;IDA] [GO:0033186 "CAF-1 complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0042393 "histone
binding" evidence=IDA;NAS;TAS] [GO:0016590 "ACF complex"
evidence=IDA] [GO:0006281 "DNA repair" evidence=TAS] [GO:0006334
"nucleosome assembly" evidence=NAS;IDA] [GO:0016573 "histone
acetylation" evidence=ISS;IDA] [GO:0016589 "NURF complex"
evidence=NAS;TAS;IPI] [GO:0035035 "histone acetyltransferase
binding" evidence=ISS;IPI] [GO:0005700 "polytene chromosome"
evidence=IDA] [GO:0042766 "nucleosome mobilization" evidence=IDA]
[GO:0006335 "DNA replication-dependent nucleosome assembly"
evidence=NAS] [GO:0003682 "chromatin binding" evidence=NAS]
[GO:0006342 "chromatin silencing" evidence=IPI] [GO:0006351
"transcription, DNA-dependent" evidence=IDA] [GO:0007346
"regulation of mitotic cell cycle" evidence=IMP] [GO:0046976
"histone methyltransferase activity (H3-K27 specific)" evidence=IC]
[GO:0046974 "histone methyltransferase activity (H3-K9 specific)"
evidence=IC] [GO:0016571 "histone methylation" evidence=IDA]
[GO:0035098 "ESC/E(Z) complex" evidence=IDA] [GO:0007307 "eggshell
chorion gene amplification" evidence=IC] [GO:0031523 "Myb complex"
evidence=IDA] [GO:0005667 "transcription factor complex"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016581 "NuRD complex" evidence=IDA] [GO:0042803 "protein
homodimerization activity" evidence=IPI] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0031491
"nucleosome binding" evidence=IDA] [GO:0042054 "histone
methyltransferase activity" evidence=IDA] [GO:0035097 "histone
methyltransferase complex" evidence=IDA] [GO:0007517 "muscle organ
development" evidence=IMP] [GO:0048813 "dendrite morphogenesis"
evidence=IMP] [GO:0048666 "neuron development" evidence=IMP]
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
[GO:0070822 "Sin3-type complex" evidence=IDA] [GO:0007379 "segment
specification" evidence=IMP] [GO:0008284 "positive regulation of
cell proliferation" evidence=IMP] [GO:0061085 "regulation of
histone H3-K27 methylation" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014297 GO:GO:0007346
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008284 GO:GO:0006281 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0006351
GO:GO:0005667 GO:GO:0000122 GO:GO:0000910 GO:GO:0048813
GO:GO:0007517 GO:GO:0035098 GO:GO:0007379 GO:GO:0006342
GO:GO:0051567 GO:GO:0042393 GO:GO:0005700 GO:GO:0042826
GO:GO:0035035 GO:GO:0042766 GO:GO:0016584 GO:GO:0006334
GO:GO:0016589 GO:GO:0033186 EMBL:U62388 EMBL:AM294392 EMBL:AM294393
EMBL:AM294394 EMBL:AM294395 EMBL:AM294396 EMBL:AM294397
EMBL:AM294398 EMBL:AM294399 EMBL:AM294400 EMBL:AM294401
EMBL:AM294402 EMBL:AM294403 EMBL:AY061408 RefSeq:NP_524354.1
UniGene:Dm.1657 PDB:2XYI PDB:2YB8 PDB:2YBA PDB:3C99 PDB:3C9C
PDBsum:2XYI PDBsum:2YB8 PDBsum:2YBA PDBsum:3C99 PDBsum:3C9C
ProteinModelPortal:Q24572 SMR:Q24572 DIP:DIP-23697N IntAct:Q24572
MINT:MINT-252601 STRING:Q24572 PaxDb:Q24572 PRIDE:Q24572
EnsemblMetazoa:FBtr0083052 GeneID:41836 KEGG:dme:Dmel_CG4236
CTD:41836 FlyBase:FBgn0263347 GeneTree:ENSGT00570000079069
InParanoid:Q24572 KO:K10752 OMA:CQPDLRL OrthoDB:EOG4ZCRKP
PhylomeDB:Q24572 EvolutionaryTrace:Q24572 GenomeRNAi:41836
NextBio:825799 Bgee:Q24572 GermOnline:CG4236 GO:GO:0031523
GO:GO:0016581 GO:GO:0070822 GO:GO:0007307 GO:GO:0070734
InterPro:IPR022052 Pfam:PF12265 Uniprot:Q24572
Length = 430
Score = 314 (115.6 bits), Expect = 1.6e-26, P = 1.6e-26
Identities = 84/278 (30%), Positives = 133/278 (47%)
Query: 221 GHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKG-PGIPTPPLFSFSGHLTEGFAMD 279
G N A + + A +T + ++ K K P P GH EG+ +
Sbjct: 129 GEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLS 188
Query: 280 WSSTEPGVLATGDCKRNIHIW----TPREAGAWQVDQKPL-VGHTNSVEDLQWSPGEKRV 334
W+ G L + I +W TP+E +D K + GHT VED+ W + +
Sbjct: 189 WNPNLNGYLLSASDDHTICLWDINATPKEHRV--IDAKNIFTGHTAVVEDVAWHLLHESL 246
Query: 335 LASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR-TEPLIVSGGDDGCIHVW 393
S + D + IWDTR NT T+ +AHT++VN +S+N +E ++ +G D + +W
Sbjct: 247 FGSVADDQKLMIWDTRNNNTSKPSHTV-DAHTAEVNCLSFNPYSEFILATGSADKTVALW 305
Query: 394 DLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQRE 453
DLR K + +F+ H + V+W P + AS G D ++ +WDL+ + E EQ
Sbjct: 306 DLRNLKL--KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLS--KIGE-EQST 360
Query: 454 AELKDLPSQLLFIHLGQK-EIKELHWHPQLPGTIISTA 490
+ +D P +LLFIH G +I + W+P P I S +
Sbjct: 361 EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVS 398
Score = 208 (78.3 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 65/258 (25%), Positives = 108/258 (41%)
Query: 160 KGPGIPTP-----PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIW----TPREAG 210
K P P P P GH EG+ + W+ G L + I +W TP+E
Sbjct: 160 KHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHR 219
Query: 211 AWQVDQKPL-GGHTNSAEDLQWSDLKTAL-QTVDDPFQLAEHNKKRGKGPGIPTPPLFSF 268
+D K + GHT ED+ W L +L +V D +L + + + P +
Sbjct: 220 V--IDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNN----TSKPSHTV 273
Query: 269 SGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWS 328
H E + ++ +LATG + + +W R ++ H + + +QWS
Sbjct: 274 DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL---KLKLHSFESHKDEIFQVQWS 330
Query: 329 PGEKRVLASCSVDLSIRIWDTRVI----NTKSC------MLTLPNAHTSDVNVISWNRTE 378
P + +LAS D + +WD I +T+ +L + HT+ ++ SWN E
Sbjct: 331 PHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNE 390
Query: 379 PLIV-SGGDDGCIHVWDL 395
P I+ S +D + VW +
Sbjct: 391 PWIICSVSEDNIMQVWQM 408
Score = 199 (75.1 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 75/263 (28%), Positives = 110/263 (41%)
Query: 298 HIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSC 357
H P +G Q D + L GH L W+P L S S D +I +WD +
Sbjct: 161 HPSKPEPSGECQPDLR-LRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHR 219
Query: 358 MLTLPN---AHTSDVNVISWNRT-EPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAP 413
++ N HT+ V ++W+ E L S DD + +WD R T HTA
Sbjct: 220 VIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAE 279
Query: 414 VTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAEL-KDLPSQLLF------I 466
V + ++P A+G AD +ALWDL R+ +++ E KD Q+ + I
Sbjct: 280 VNCLSFNPYSEFILATGSADKTVALWDL---RNLKLKLHSFESHKDEIFQVQWSPHNETI 336
Query: 467 HLGQKEIKELH-WHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQK-EIKELHWHP 524
+ LH W G ST ++ D P +LLFIH G +I + W+P
Sbjct: 337 LASSGTDRRLHVWDLSKIGEEQSTEDA--------EDGPPELLFIHGGHTAKISDFSWNP 388
Query: 525 QLPGTIISTANSGFNIFRTISMS 547
P I S + NI + M+
Sbjct: 389 NEPWIICSVSED--NIMQVWQMA 409
>UNIPROTKB|F2Z4M0 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9031
"Gallus gallus" [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0016589 "NURF complex"
evidence=IEA] [GO:0031497 "chromatin assembly" evidence=IEA]
[GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0035098 "ESC/E(Z)
complex" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 IPI:IPI00592914
EMBL:AADN02043764 ProteinModelPortal:F2Z4M0 SMR:F2Z4M0 PRIDE:F2Z4M0
Ensembl:ENSGALT00000005575 Uniprot:F2Z4M0
Length = 425
Score = 311 (114.5 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 83/278 (29%), Positives = 132/278 (47%)
Query: 221 GHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGK-GPGIPTPPLFSFSGHLTEGFAMD 279
G N A + + A +T + ++ K K P P GH EG+ +
Sbjct: 125 GEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLS 184
Query: 280 WSSTEPGVLATGDCKRNIHIW----TPREAGAWQVDQKPL-VGHTNSVEDLQWSPGEKRV 334
W+ G L + I +W P+E VD K + GHT VED+ W + +
Sbjct: 185 WNPNLSGHLLSASDDHTICLWDISAVPKEGKV--VDAKTIFTGHTAVVEDVSWHLLHESL 242
Query: 335 LASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR-TEPLIVSGGDDGCIHVW 393
S + D + IWDTR NT ++ +AHT++VN +S+N +E ++ +G D + +W
Sbjct: 243 FGSVADDQKLMIWDTRSNNTSKPSHSV-DAHTAEVNCLSFNPYSEFILATGSADKTVALW 301
Query: 394 DLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQRE 453
DLR K + +F+ H + V+W P + AS G D ++ +WDL+ + E EQ
Sbjct: 302 DLRNLKL--KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLS--KIGE-EQSP 356
Query: 454 AELKDLPSQLLFIHLGQK-EIKELHWHPQLPGTIISTA 490
+ +D P +LLFIH G +I + W+P P I S +
Sbjct: 357 EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVS 394
Score = 207 (77.9 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 64/258 (24%), Positives = 105/258 (40%)
Query: 160 KGPGIPTP-----PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIW----TPREAG 210
K P P P P GH EG+ + W+ G L + I +W P+E
Sbjct: 156 KHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGK 215
Query: 211 AWQVDQKPL-GGHTNSAEDLQWSDLKTAL-QTVDDPFQLAEHNKKRGKGPGIPTPPLFSF 268
VD K + GHT ED+ W L +L +V D +L + + + P S
Sbjct: 216 V--VDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNN----TSKPSHSV 269
Query: 269 SGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWS 328
H E + ++ +LATG + + +W R ++ H + + +QWS
Sbjct: 270 DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL---KLKLHSFESHKDEIFQVQWS 326
Query: 329 PGEKRVLASCSVDLSIRIWDTRVINTKSC----------MLTLPNAHTSDVNVISWNRTE 378
P + +LAS D + +WD I + +L + HT+ ++ SWN E
Sbjct: 327 PHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNE 386
Query: 379 PLIV-SGGDDGCIHVWDL 395
P ++ S +D + VW +
Sbjct: 387 PWVICSVSEDNIMQVWQM 404
Score = 191 (72.3 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 74/268 (27%), Positives = 113/268 (42%)
Query: 298 HIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSC 357
H P +G D + L GH L W+P L S S D +I +WD + +
Sbjct: 157 HPSKPDPSGECNPDLR-LRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGK 215
Query: 358 ML---TLPNAHTSDVNVISWNRT-EPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAP 413
++ T+ HT+ V +SW+ E L S DD + +WD R + HTA
Sbjct: 216 VVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAE 275
Query: 414 VTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEI 473
V + ++P A+G AD +ALWDL R +LK L S + EI
Sbjct: 276 VNCLSFNPYSEFILATGSADKTVALWDL----------RNLKLK-LHS----FESHKDEI 320
Query: 474 KELHWHPQLPGTIISTANSG--FNIF-----------RTISDLPSQLLFIHLGQK-EIKE 519
++ W P TI++++ + N++ D P +LLFIH G +I +
Sbjct: 321 FQVQWSPHNE-TILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISD 379
Query: 520 LHWHPQLPGTIISTANSGFNIFRTISMS 547
W+P P I S + NI + M+
Sbjct: 380 FSWNPNEPWVICSVSED--NIMQVWQMA 405
>UNIPROTKB|Q9W7I5 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9031
"Gallus gallus" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0033186
"CAF-1 complex" evidence=ISS] [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006338
"chromatin remodeling" evidence=ISS] [GO:0008094 "DNA-dependent
ATPase activity" evidence=ISS] [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338
GO:GO:0007049 GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330 CTD:5928
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:AF097750 IPI:IPI00592914
RefSeq:NP_990183.1 UniGene:Gga.1029 ProteinModelPortal:Q9W7I5
SMR:Q9W7I5 STRING:Q9W7I5 PRIDE:Q9W7I5 GeneID:395658 KEGG:gga:395658
InParanoid:Q9W7I5 NextBio:20815730 Uniprot:Q9W7I5
Length = 425
Score = 311 (114.5 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 83/278 (29%), Positives = 132/278 (47%)
Query: 221 GHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGK-GPGIPTPPLFSFSGHLTEGFAMD 279
G N A + + A +T + ++ K K P P GH EG+ +
Sbjct: 125 GEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLS 184
Query: 280 WSSTEPGVLATGDCKRNIHIW----TPREAGAWQVDQKPL-VGHTNSVEDLQWSPGEKRV 334
W+ G L + I +W P+E VD K + GHT VED+ W + +
Sbjct: 185 WNPNLSGHLLSASDDHTICLWDISAVPKEGKV--VDAKTIFTGHTAVVEDVSWHLLHESL 242
Query: 335 LASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR-TEPLIVSGGDDGCIHVW 393
S + D + IWDTR NT ++ +AHT++VN +S+N +E ++ +G D + +W
Sbjct: 243 FGSVADDQKLMIWDTRSNNTSKPSHSV-DAHTAEVNCLSFNPYSEFILATGSADKTVALW 301
Query: 394 DLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQRE 453
DLR K + +F+ H + V+W P + AS G D ++ +WDL+ + E EQ
Sbjct: 302 DLRNLKL--KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLS--KIGE-EQSP 356
Query: 454 AELKDLPSQLLFIHLGQK-EIKELHWHPQLPGTIISTA 490
+ +D P +LLFIH G +I + W+P P I S +
Sbjct: 357 EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVS 394
Score = 207 (77.9 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 64/258 (24%), Positives = 105/258 (40%)
Query: 160 KGPGIPTP-----PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIW----TPREAG 210
K P P P P GH EG+ + W+ G L + I +W P+E
Sbjct: 156 KHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGK 215
Query: 211 AWQVDQKPL-GGHTNSAEDLQWSDLKTAL-QTVDDPFQLAEHNKKRGKGPGIPTPPLFSF 268
VD K + GHT ED+ W L +L +V D +L + + + P S
Sbjct: 216 V--VDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNN----TSKPSHSV 269
Query: 269 SGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWS 328
H E + ++ +LATG + + +W R ++ H + + +QWS
Sbjct: 270 DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL---KLKLHSFESHKDEIFQVQWS 326
Query: 329 PGEKRVLASCSVDLSIRIWDTRVINTKSC----------MLTLPNAHTSDVNVISWNRTE 378
P + +LAS D + +WD I + +L + HT+ ++ SWN E
Sbjct: 327 PHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNE 386
Query: 379 PLIV-SGGDDGCIHVWDL 395
P ++ S +D + VW +
Sbjct: 387 PWVICSVSEDNIMQVWQM 404
Score = 191 (72.3 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 74/268 (27%), Positives = 113/268 (42%)
Query: 298 HIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSC 357
H P +G D + L GH L W+P L S S D +I +WD + +
Sbjct: 157 HPSKPDPSGECNPDLR-LRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGK 215
Query: 358 ML---TLPNAHTSDVNVISWNRT-EPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAP 413
++ T+ HT+ V +SW+ E L S DD + +WD R + HTA
Sbjct: 216 VVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAE 275
Query: 414 VTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEI 473
V + ++P A+G AD +ALWDL R +LK L S + EI
Sbjct: 276 VNCLSFNPYSEFILATGSADKTVALWDL----------RNLKLK-LHS----FESHKDEI 320
Query: 474 KELHWHPQLPGTIISTANSG--FNIF-----------RTISDLPSQLLFIHLGQK-EIKE 519
++ W P TI++++ + N++ D P +LLFIH G +I +
Sbjct: 321 FQVQWSPHNE-TILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISD 379
Query: 520 LHWHPQLPGTIISTANSGFNIFRTISMS 547
W+P P I S + NI + M+
Sbjct: 380 FSWNPNEPWVICSVSED--NIMQVWQMA 405
>UNIPROTKB|Q3MHL3 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9913
"Bos taurus" [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0016581
"NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0006338 GO:GO:0007049 GO:GO:0035098 GO:GO:0031497
GO:GO:0016589 GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752
OMA:CQPDLRL GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265
GO:GO:0008094 HOGENOM:HOG000160330 EMBL:BT030530 EMBL:BC105195
IPI:IPI00717704 RefSeq:NP_001070481.1 UniGene:Bt.101874
ProteinModelPortal:Q3MHL3 SMR:Q3MHL3 STRING:Q3MHL3 PRIDE:Q3MHL3
Ensembl:ENSBTAT00000007758 GeneID:767940 KEGG:bta:767940 CTD:5928
HOVERGEN:HBG053236 InParanoid:Q3MHL3 OrthoDB:EOG4DBTDH
NextBio:20918297 Uniprot:Q3MHL3
Length = 425
Score = 311 (114.5 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 83/278 (29%), Positives = 132/278 (47%)
Query: 221 GHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGK-GPGIPTPPLFSFSGHLTEGFAMD 279
G N A + + A +T + ++ K K P P GH EG+ +
Sbjct: 125 GEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLS 184
Query: 280 WSSTEPGVLATGDCKRNIHIW----TPREAGAWQVDQKPL-VGHTNSVEDLQWSPGEKRV 334
W+ G L + I +W P+E VD K + GHT VED+ W + +
Sbjct: 185 WNPNLSGHLLSASDDHTICLWDISAVPKEGKV--VDAKTIFTGHTAVVEDVSWHLLHESL 242
Query: 335 LASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR-TEPLIVSGGDDGCIHVW 393
S + D + IWDTR NT ++ +AHT++VN +S+N +E ++ +G D + +W
Sbjct: 243 FGSVADDQKLMIWDTRSNNTSKPSHSV-DAHTAEVNCLSFNPYSEFILATGSADKTVALW 301
Query: 394 DLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQRE 453
DLR K + +F+ H + V+W P + AS G D ++ +WDL+ + E EQ
Sbjct: 302 DLRNLKL--KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLS--KIGE-EQSP 356
Query: 454 AELKDLPSQLLFIHLGQK-EIKELHWHPQLPGTIISTA 490
+ +D P +LLFIH G +I + W+P P I S +
Sbjct: 357 EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVS 394
Score = 207 (77.9 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 64/258 (24%), Positives = 105/258 (40%)
Query: 160 KGPGIPTP-----PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIW----TPREAG 210
K P P P P GH EG+ + W+ G L + I +W P+E
Sbjct: 156 KHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGK 215
Query: 211 AWQVDQKPL-GGHTNSAEDLQWSDLKTAL-QTVDDPFQLAEHNKKRGKGPGIPTPPLFSF 268
VD K + GHT ED+ W L +L +V D +L + + + P S
Sbjct: 216 V--VDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNN----TSKPSHSV 269
Query: 269 SGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWS 328
H E + ++ +LATG + + +W R ++ H + + +QWS
Sbjct: 270 DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL---KLKLHSFESHKDEIFQVQWS 326
Query: 329 PGEKRVLASCSVDLSIRIWDTRVINTKSC----------MLTLPNAHTSDVNVISWNRTE 378
P + +LAS D + +WD I + +L + HT+ ++ SWN E
Sbjct: 327 PHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNE 386
Query: 379 PLIV-SGGDDGCIHVWDL 395
P ++ S +D + VW +
Sbjct: 387 PWVICSVSEDNIMQVWQM 404
Score = 191 (72.3 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 74/268 (27%), Positives = 113/268 (42%)
Query: 298 HIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSC 357
H P +G D + L GH L W+P L S S D +I +WD + +
Sbjct: 157 HPSKPDPSGECNPDLR-LRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGK 215
Query: 358 ML---TLPNAHTSDVNVISWNRT-EPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAP 413
++ T+ HT+ V +SW+ E L S DD + +WD R + HTA
Sbjct: 216 VVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAE 275
Query: 414 VTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEI 473
V + ++P A+G AD +ALWDL R +LK L S + EI
Sbjct: 276 VNCLSFNPYSEFILATGSADKTVALWDL----------RNLKLK-LHS----FESHKDEI 320
Query: 474 KELHWHPQLPGTIISTANSG--FNIF-----------RTISDLPSQLLFIHLGQK-EIKE 519
++ W P TI++++ + N++ D P +LLFIH G +I +
Sbjct: 321 FQVQWSPHNE-TILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISD 379
Query: 520 LHWHPQLPGTIISTANSGFNIFRTISMS 547
W+P P I S + NI + M+
Sbjct: 380 FSWNPNEPWVICSVSED--NIMQVWQMA 405
>UNIPROTKB|E2QXR8 [details] [associations]
symbol:RBBP4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0035098 "ESC/E(Z) complex" evidence=IEA]
[GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0031497 "chromatin
assembly" evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 KO:K10752 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 CTD:5928
EMBL:AAEX03001654 RefSeq:XP_864445.1 ProteinModelPortal:E2QXR8
SMR:E2QXR8 PRIDE:E2QXR8 Ensembl:ENSCAFT00000016755 GeneID:478149
KEGG:cfa:478149 NextBio:20853518 Uniprot:E2QXR8
Length = 425
Score = 311 (114.5 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 83/278 (29%), Positives = 132/278 (47%)
Query: 221 GHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGK-GPGIPTPPLFSFSGHLTEGFAMD 279
G N A + + A +T + ++ K K P P GH EG+ +
Sbjct: 125 GEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLS 184
Query: 280 WSSTEPGVLATGDCKRNIHIW----TPREAGAWQVDQKPL-VGHTNSVEDLQWSPGEKRV 334
W+ G L + I +W P+E VD K + GHT VED+ W + +
Sbjct: 185 WNPNLSGHLLSASDDHTICLWDISAVPKEGKV--VDAKTIFTGHTAVVEDVSWHLLHESL 242
Query: 335 LASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR-TEPLIVSGGDDGCIHVW 393
S + D + IWDTR NT ++ +AHT++VN +S+N +E ++ +G D + +W
Sbjct: 243 FGSVADDQKLMIWDTRSNNTSKPSHSV-DAHTAEVNCLSFNPYSEFILATGSADKTVALW 301
Query: 394 DLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQRE 453
DLR K + +F+ H + V+W P + AS G D ++ +WDL+ + E EQ
Sbjct: 302 DLRNLKL--KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLS--KIGE-EQSP 356
Query: 454 AELKDLPSQLLFIHLGQK-EIKELHWHPQLPGTIISTA 490
+ +D P +LLFIH G +I + W+P P I S +
Sbjct: 357 EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVS 394
Score = 207 (77.9 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 64/258 (24%), Positives = 105/258 (40%)
Query: 160 KGPGIPTP-----PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIW----TPREAG 210
K P P P P GH EG+ + W+ G L + I +W P+E
Sbjct: 156 KHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGK 215
Query: 211 AWQVDQKPL-GGHTNSAEDLQWSDLKTAL-QTVDDPFQLAEHNKKRGKGPGIPTPPLFSF 268
VD K + GHT ED+ W L +L +V D +L + + + P S
Sbjct: 216 V--VDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNN----TSKPSHSV 269
Query: 269 SGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWS 328
H E + ++ +LATG + + +W R ++ H + + +QWS
Sbjct: 270 DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL---KLKLHSFESHKDEIFQVQWS 326
Query: 329 PGEKRVLASCSVDLSIRIWDTRVINTKSC----------MLTLPNAHTSDVNVISWNRTE 378
P + +LAS D + +WD I + +L + HT+ ++ SWN E
Sbjct: 327 PHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNE 386
Query: 379 PLIV-SGGDDGCIHVWDL 395
P ++ S +D + VW +
Sbjct: 387 PWVICSVSEDNIMQVWQM 404
Score = 191 (72.3 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 74/268 (27%), Positives = 113/268 (42%)
Query: 298 HIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSC 357
H P +G D + L GH L W+P L S S D +I +WD + +
Sbjct: 157 HPSKPDPSGECNPDLR-LRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGK 215
Query: 358 ML---TLPNAHTSDVNVISWNRT-EPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAP 413
++ T+ HT+ V +SW+ E L S DD + +WD R + HTA
Sbjct: 216 VVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAE 275
Query: 414 VTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEI 473
V + ++P A+G AD +ALWDL R +LK L S + EI
Sbjct: 276 VNCLSFNPYSEFILATGSADKTVALWDL----------RNLKLK-LHS----FESHKDEI 320
Query: 474 KELHWHPQLPGTIISTANSG--FNIF-----------RTISDLPSQLLFIHLGQK-EIKE 519
++ W P TI++++ + N++ D P +LLFIH G +I +
Sbjct: 321 FQVQWSPHNE-TILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISD 379
Query: 520 LHWHPQLPGTIISTANSGFNIFRTISMS 547
W+P P I S + NI + M+
Sbjct: 380 FSWNPNEPWVICSVSED--NIMQVWQMA 405
>UNIPROTKB|Q09028 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016581 "NuRD complex" evidence=NAS;IDA] [GO:0016589 "NURF
complex" evidence=IDA] [GO:0035098 "ESC/E(Z) complex" evidence=IDA]
[GO:0033186 "CAF-1 complex" evidence=IDA] [GO:0031497 "chromatin
assembly" evidence=IDA] [GO:0008285 "negative regulation of cell
proliferation" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=IDA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IDA] [GO:0000278 "mitotic
cell cycle" evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006334 "nucleosome assembly" evidence=TAS] [GO:0034080 "CENP-A
containing nucleosome assembly at centromere" evidence=TAS]
[GO:0016580 "Sin3 complex" evidence=NAS] [GO:0042393 "histone
binding" evidence=NAS] [GO:0042826 "histone deacetylase binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Pathway_Interaction_DB:telomerasepathway
Reactome:REACT_115566 GO:GO:0008285 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CH471059 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035098
GO:GO:0042393 Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0034080
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0000278
GO:GO:0016589 GO:GO:0033186 KO:K10752 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0016580 PDB:2XU7 PDBsum:2XU7
CTD:5928 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:X74262
EMBL:X71810 EMBL:BT007309 EMBL:AK299251 EMBL:AK312571 EMBL:AK222779
EMBL:AC114489 EMBL:BC003092 EMBL:BC015123 EMBL:BC053904
EMBL:BC075836 IPI:IPI00328319 IPI:IPI00645329 IPI:IPI00877802
IPI:IPI00877934 PIR:S36112 RefSeq:NP_001128727.1
RefSeq:NP_001128728.1 RefSeq:NP_005601.1 UniGene:Hs.16003 PDB:3GFC
PDBsum:3GFC ProteinModelPortal:Q09028 SMR:Q09028 DIP:DIP-33495N
IntAct:Q09028 MINT:MINT-90543 STRING:Q09028 PhosphoSite:Q09028
DMDM:1172846 PaxDb:Q09028 PRIDE:Q09028 DNASU:5928
Ensembl:ENST00000373485 Ensembl:ENST00000373493
Ensembl:ENST00000414241 Ensembl:ENST00000458695 GeneID:5928
KEGG:hsa:5928 UCSC:uc001bvr.3 UCSC:uc001bvs.3 GeneCards:GC01P033116
HGNC:HGNC:9887 HPA:CAB006264 MIM:602923 neXtProt:NX_Q09028
PharmGKB:PA34251 InParanoid:Q09028 PhylomeDB:Q09028 ChiTaRS:RBBP4
EvolutionaryTrace:Q09028 GenomeRNAi:5928 NextBio:23094
ArrayExpress:Q09028 Bgee:Q09028 CleanEx:HS_RBBP4
Genevestigator:Q09028 GermOnline:ENSG00000162521 Uniprot:Q09028
Length = 425
Score = 311 (114.5 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 83/278 (29%), Positives = 132/278 (47%)
Query: 221 GHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGK-GPGIPTPPLFSFSGHLTEGFAMD 279
G N A + + A +T + ++ K K P P GH EG+ +
Sbjct: 125 GEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLS 184
Query: 280 WSSTEPGVLATGDCKRNIHIW----TPREAGAWQVDQKPL-VGHTNSVEDLQWSPGEKRV 334
W+ G L + I +W P+E VD K + GHT VED+ W + +
Sbjct: 185 WNPNLSGHLLSASDDHTICLWDISAVPKEGKV--VDAKTIFTGHTAVVEDVSWHLLHESL 242
Query: 335 LASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR-TEPLIVSGGDDGCIHVW 393
S + D + IWDTR NT ++ +AHT++VN +S+N +E ++ +G D + +W
Sbjct: 243 FGSVADDQKLMIWDTRSNNTSKPSHSV-DAHTAEVNCLSFNPYSEFILATGSADKTVALW 301
Query: 394 DLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQRE 453
DLR K + +F+ H + V+W P + AS G D ++ +WDL+ + E EQ
Sbjct: 302 DLRNLKL--KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLS--KIGE-EQSP 356
Query: 454 AELKDLPSQLLFIHLGQK-EIKELHWHPQLPGTIISTA 490
+ +D P +LLFIH G +I + W+P P I S +
Sbjct: 357 EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVS 394
Score = 207 (77.9 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 64/258 (24%), Positives = 105/258 (40%)
Query: 160 KGPGIPTP-----PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIW----TPREAG 210
K P P P P GH EG+ + W+ G L + I +W P+E
Sbjct: 156 KHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGK 215
Query: 211 AWQVDQKPL-GGHTNSAEDLQWSDLKTAL-QTVDDPFQLAEHNKKRGKGPGIPTPPLFSF 268
VD K + GHT ED+ W L +L +V D +L + + + P S
Sbjct: 216 V--VDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNN----TSKPSHSV 269
Query: 269 SGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWS 328
H E + ++ +LATG + + +W R ++ H + + +QWS
Sbjct: 270 DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL---KLKLHSFESHKDEIFQVQWS 326
Query: 329 PGEKRVLASCSVDLSIRIWDTRVINTKSC----------MLTLPNAHTSDVNVISWNRTE 378
P + +LAS D + +WD I + +L + HT+ ++ SWN E
Sbjct: 327 PHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNE 386
Query: 379 PLIV-SGGDDGCIHVWDL 395
P ++ S +D + VW +
Sbjct: 387 PWVICSVSEDNIMQVWQM 404
Score = 191 (72.3 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 74/268 (27%), Positives = 113/268 (42%)
Query: 298 HIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSC 357
H P +G D + L GH L W+P L S S D +I +WD + +
Sbjct: 157 HPSKPDPSGECNPDLR-LRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGK 215
Query: 358 ML---TLPNAHTSDVNVISWNRT-EPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAP 413
++ T+ HT+ V +SW+ E L S DD + +WD R + HTA
Sbjct: 216 VVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAE 275
Query: 414 VTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEI 473
V + ++P A+G AD +ALWDL R +LK L S + EI
Sbjct: 276 VNCLSFNPYSEFILATGSADKTVALWDL----------RNLKLK-LHS----FESHKDEI 320
Query: 474 KELHWHPQLPGTIISTANSG--FNIF-----------RTISDLPSQLLFIHLGQK-EIKE 519
++ W P TI++++ + N++ D P +LLFIH G +I +
Sbjct: 321 FQVQWSPHNE-TILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISD 379
Query: 520 LHWHPQLPGTIISTANSGFNIFRTISMS 547
W+P P I S + NI + M+
Sbjct: 380 FSWNPNEPWVICSVSED--NIMQVWQMA 405
>UNIPROTKB|Q5M7K4 [details] [associations]
symbol:rbbp4 "Histone-binding protein RBBP4" species:8364
"Xenopus (Silurana) tropicalis" [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0016568 GO:GO:0007049 GO:GO:0035098 GO:GO:0031497
GO:GO:0033186 InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:BC088588 UniGene:Str.6093
ProteinModelPortal:Q5M7K4 SMR:Q5M7K4 STRING:Q5M7K4
Xenbase:XB-GENE-482002 InParanoid:Q5M7K4 Uniprot:Q5M7K4
Length = 425
Score = 311 (114.5 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 83/278 (29%), Positives = 132/278 (47%)
Query: 221 GHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGK-GPGIPTPPLFSFSGHLTEGFAMD 279
G N A + + A +T + ++ K K P P GH EG+ +
Sbjct: 125 GEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLS 184
Query: 280 WSSTEPGVLATGDCKRNIHIW----TPREAGAWQVDQKPL-VGHTNSVEDLQWSPGEKRV 334
W+ G L + I +W P+E VD K + GHT VED+ W + +
Sbjct: 185 WNPNLSGNLLSASDDHTICLWDISAVPKEGKV--VDAKTIFTGHTAVVEDVSWHLLHESL 242
Query: 335 LASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR-TEPLIVSGGDDGCIHVW 393
S + D + IWDTR NT ++ +AHT++VN +S+N +E ++ +G D + +W
Sbjct: 243 FGSVADDQKLMIWDTRSNNTSKPSHSV-DAHTAEVNCLSFNPYSEFILATGSADKTVALW 301
Query: 394 DLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQRE 453
DLR K + +F+ H + V+W P + AS G D ++ +WDL+ + E EQ
Sbjct: 302 DLRNLKL--KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLS--KIGE-EQSP 356
Query: 454 AELKDLPSQLLFIHLGQK-EIKELHWHPQLPGTIISTA 490
+ +D P +LLFIH G +I + W+P P I S +
Sbjct: 357 EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVS 394
Score = 207 (77.9 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 64/258 (24%), Positives = 105/258 (40%)
Query: 160 KGPGIPTP-----PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIW----TPREAG 210
K P P P P GH EG+ + W+ G L + I +W P+E
Sbjct: 156 KHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDISAVPKEGK 215
Query: 211 AWQVDQKPL-GGHTNSAEDLQWSDLKTAL-QTVDDPFQLAEHNKKRGKGPGIPTPPLFSF 268
VD K + GHT ED+ W L +L +V D +L + + + P S
Sbjct: 216 V--VDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNN----TSKPSHSV 269
Query: 269 SGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWS 328
H E + ++ +LATG + + +W R ++ H + + +QWS
Sbjct: 270 DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL---KLKLHSFESHKDEIFQVQWS 326
Query: 329 PGEKRVLASCSVDLSIRIWDTRVINTKSC----------MLTLPNAHTSDVNVISWNRTE 378
P + +LAS D + +WD I + +L + HT+ ++ SWN E
Sbjct: 327 PHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNE 386
Query: 379 PLIV-SGGDDGCIHVWDL 395
P ++ S +D + VW +
Sbjct: 387 PWVICSVSEDNIMQVWQM 404
Score = 191 (72.3 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 74/268 (27%), Positives = 113/268 (42%)
Query: 298 HIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSC 357
H P +G D + L GH L W+P L S S D +I +WD + +
Sbjct: 157 HPSKPDPSGECNPDLR-LRGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDISAVPKEGK 215
Query: 358 ML---TLPNAHTSDVNVISWNRT-EPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAP 413
++ T+ HT+ V +SW+ E L S DD + +WD R + HTA
Sbjct: 216 VVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAE 275
Query: 414 VTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEI 473
V + ++P A+G AD +ALWDL R +LK L S + EI
Sbjct: 276 VNCLSFNPYSEFILATGSADKTVALWDL----------RNLKLK-LHS----FESHKDEI 320
Query: 474 KELHWHPQLPGTIISTANSG--FNIF-----------RTISDLPSQLLFIHLGQK-EIKE 519
++ W P TI++++ + N++ D P +LLFIH G +I +
Sbjct: 321 FQVQWSPHNE-TILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISD 379
Query: 520 LHWHPQLPGTIISTANSGFNIFRTISMS 547
W+P P I S + NI + M+
Sbjct: 380 FSWNPNEPWVICSVSED--NIMQVWQMA 405
>UNIPROTKB|Q5RF92 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9601
"Pongo abelii" [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0007049
GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 CTD:5928 HOVERGEN:HBG053236
EMBL:CR857269 RefSeq:NP_001124686.1 UniGene:Pab.10290
UniGene:Pab.17706 ProteinModelPortal:Q5RF92 SMR:Q5RF92
GeneID:100461561 KEGG:pon:100461561 InParanoid:Q5RF92
Uniprot:Q5RF92
Length = 425
Score = 311 (114.5 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 83/278 (29%), Positives = 132/278 (47%)
Query: 221 GHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGK-GPGIPTPPLFSFSGHLTEGFAMD 279
G N A + + A +T + ++ K K P P GH EG+ +
Sbjct: 125 GEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLS 184
Query: 280 WSSTEPGVLATGDCKRNIHIW----TPREAGAWQVDQKPL-VGHTNSVEDLQWSPGEKRV 334
W+ G L + I +W P+E VD K + GHT VED+ W + +
Sbjct: 185 WNPNLSGHLLSASDDHTICLWDISAVPKEGKV--VDAKTIFTGHTAVVEDVSWHLLHESL 242
Query: 335 LASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR-TEPLIVSGGDDGCIHVW 393
S + D + IWDTR NT ++ +AHT++VN +S+N +E ++ +G D + +W
Sbjct: 243 FGSVADDQKLMIWDTRSNNTSKPSHSV-DAHTAEVNCLSFNPYSEFILATGSADKTVALW 301
Query: 394 DLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQRE 453
DLR K + +F+ H + V+W P + AS G D ++ +WDL+ + E EQ
Sbjct: 302 DLRNLKL--KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLS--KIGE-EQSP 356
Query: 454 AELKDLPSQLLFIHLGQK-EIKELHWHPQLPGTIISTA 490
+ +D P +LLFIH G +I + W+P P I S +
Sbjct: 357 EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVS 394
Score = 207 (77.9 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 64/258 (24%), Positives = 105/258 (40%)
Query: 160 KGPGIPTP-----PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIW----TPREAG 210
K P P P P GH EG+ + W+ G L + I +W P+E
Sbjct: 156 KHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGK 215
Query: 211 AWQVDQKPL-GGHTNSAEDLQWSDLKTAL-QTVDDPFQLAEHNKKRGKGPGIPTPPLFSF 268
VD K + GHT ED+ W L +L +V D +L + + + P S
Sbjct: 216 V--VDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNN----TSKPSHSV 269
Query: 269 SGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWS 328
H E + ++ +LATG + + +W R ++ H + + +QWS
Sbjct: 270 DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL---KLKLHSFESHKDEIFQVQWS 326
Query: 329 PGEKRVLASCSVDLSIRIWDTRVINTKSC----------MLTLPNAHTSDVNVISWNRTE 378
P + +LAS D + +WD I + +L + HT+ ++ SWN E
Sbjct: 327 PHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNE 386
Query: 379 PLIV-SGGDDGCIHVWDL 395
P ++ S +D + VW +
Sbjct: 387 PWVICSVSEDNIMQVWQM 404
Score = 191 (72.3 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 74/268 (27%), Positives = 113/268 (42%)
Query: 298 HIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSC 357
H P +G D + L GH L W+P L S S D +I +WD + +
Sbjct: 157 HPSKPDPSGECNPDLR-LRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGK 215
Query: 358 ML---TLPNAHTSDVNVISWNRT-EPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAP 413
++ T+ HT+ V +SW+ E L S DD + +WD R + HTA
Sbjct: 216 VVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAE 275
Query: 414 VTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEI 473
V + ++P A+G AD +ALWDL R +LK L S + EI
Sbjct: 276 VNCLSFNPYSEFILATGSADKTVALWDL----------RNLKLK-LHS----FESHKDEI 320
Query: 474 KELHWHPQLPGTIISTANSG--FNIF-----------RTISDLPSQLLFIHLGQK-EIKE 519
++ W P TI++++ + N++ D P +LLFIH G +I +
Sbjct: 321 FQVQWSPHNE-TILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISD 379
Query: 520 LHWHPQLPGTIISTANSGFNIFRTISMS 547
W+P P I S + NI + M+
Sbjct: 380 FSWNPNEPWVICSVSED--NIMQVWQMA 405
>MGI|MGI:1194912 [details] [associations]
symbol:Rbbp4 "retinoblastoma binding protein 4"
species:10090 "Mus musculus" [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=ISO;TAS] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=ISO;IDA] [GO:0016589 "NURF complex" evidence=ISO]
[GO:0031497 "chromatin assembly" evidence=ISO] [GO:0033186 "CAF-1
complex" evidence=ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO;IDA] [GO:0042826 "histone deacetylase binding"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1194912 EMBL:CH466552 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338 GO:GO:0007049
GO:GO:0035098 GO:GO:0031497 EMBL:AL607123 GO:GO:0016589
GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752 OMA:CQPDLRL
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094
HOGENOM:HOG000160330 CTD:5928 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH
EMBL:U35141 EMBL:CU234133 EMBL:BC138568 EMBL:BC138570
IPI:IPI00828412 PIR:I49366 RefSeq:NP_033056.2 UniGene:Mm.12145
ProteinModelPortal:Q60972 SMR:Q60972 DIP:DIP-32855N IntAct:Q60972
STRING:Q60972 PhosphoSite:Q60972 REPRODUCTION-2DPAGE:Q60972
PaxDb:Q60972 PRIDE:Q60972 Ensembl:ENSMUST00000102598 GeneID:19646
KEGG:mmu:19646 InParanoid:A2A875 NextBio:296894 Bgee:Q60972
CleanEx:MM_RBBP4 Genevestigator:Q60972
GermOnline:ENSMUSG00000057236 Uniprot:Q60972
Length = 425
Score = 311 (114.5 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 83/278 (29%), Positives = 132/278 (47%)
Query: 221 GHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGK-GPGIPTPPLFSFSGHLTEGFAMD 279
G N A + + A +T + ++ K K P P GH EG+ +
Sbjct: 125 GEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLS 184
Query: 280 WSSTEPGVLATGDCKRNIHIW----TPREAGAWQVDQKPL-VGHTNSVEDLQWSPGEKRV 334
W+ G L + I +W P+E VD K + GHT VED+ W + +
Sbjct: 185 WNPNLSGHLLSASDDHTICLWDISAVPKEGKV--VDAKTIFTGHTAVVEDVSWHLLHESL 242
Query: 335 LASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR-TEPLIVSGGDDGCIHVW 393
S + D + IWDTR NT ++ +AHT++VN +S+N +E ++ +G D + +W
Sbjct: 243 FGSVADDQKLMIWDTRSNNTSKPSHSV-DAHTAEVNCLSFNPYSEFILATGSADKTVALW 301
Query: 394 DLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQRE 453
DLR K + +F+ H + V+W P + AS G D ++ +WDL+ + E EQ
Sbjct: 302 DLRNLKL--KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLS--KIGE-EQSP 356
Query: 454 AELKDLPSQLLFIHLGQK-EIKELHWHPQLPGTIISTA 490
+ +D P +LLFIH G +I + W+P P I S +
Sbjct: 357 EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVS 394
Score = 207 (77.9 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 64/258 (24%), Positives = 105/258 (40%)
Query: 160 KGPGIPTP-----PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIW----TPREAG 210
K P P P P GH EG+ + W+ G L + I +W P+E
Sbjct: 156 KHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGK 215
Query: 211 AWQVDQKPL-GGHTNSAEDLQWSDLKTAL-QTVDDPFQLAEHNKKRGKGPGIPTPPLFSF 268
VD K + GHT ED+ W L +L +V D +L + + + P S
Sbjct: 216 V--VDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNN----TSKPSHSV 269
Query: 269 SGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWS 328
H E + ++ +LATG + + +W R ++ H + + +QWS
Sbjct: 270 DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL---KLKLHSFESHKDEIFQVQWS 326
Query: 329 PGEKRVLASCSVDLSIRIWDTRVINTKSC----------MLTLPNAHTSDVNVISWNRTE 378
P + +LAS D + +WD I + +L + HT+ ++ SWN E
Sbjct: 327 PHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNE 386
Query: 379 PLIV-SGGDDGCIHVWDL 395
P ++ S +D + VW +
Sbjct: 387 PWVICSVSEDNIMQVWQM 404
Score = 191 (72.3 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 74/268 (27%), Positives = 113/268 (42%)
Query: 298 HIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSC 357
H P +G D + L GH L W+P L S S D +I +WD + +
Sbjct: 157 HPSKPDPSGECNPDLR-LRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGK 215
Query: 358 ML---TLPNAHTSDVNVISWNRT-EPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAP 413
++ T+ HT+ V +SW+ E L S DD + +WD R + HTA
Sbjct: 216 VVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAE 275
Query: 414 VTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEI 473
V + ++P A+G AD +ALWDL R +LK L S + EI
Sbjct: 276 VNCLSFNPYSEFILATGSADKTVALWDL----------RNLKLK-LHS----FESHKDEI 320
Query: 474 KELHWHPQLPGTIISTANSG--FNIF-----------RTISDLPSQLLFIHLGQK-EIKE 519
++ W P TI++++ + N++ D P +LLFIH G +I +
Sbjct: 321 FQVQWSPHNE-TILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISD 379
Query: 520 LHWHPQLPGTIISTANSGFNIFRTISMS 547
W+P P I S + NI + M+
Sbjct: 380 FSWNPNEPWVICSVSED--NIMQVWQMA 405
>RGD|1593768 [details] [associations]
symbol:Rbbp4 "retinoblastoma binding protein 4" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0006338
"chromatin remodeling" evidence=IEA;ISO] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA;ISO] [GO:0016581 "NuRD complex"
evidence=IEA;ISO] [GO:0016589 "NURF complex" evidence=IEA;ISO]
[GO:0031497 "chromatin assembly" evidence=IEA;ISO] [GO:0033186
"CAF-1 complex" evidence=IEA;ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=IEA;ISO] [GO:0042826 "histone deacetylase binding"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1593768 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338 GO:GO:0031497
GO:GO:0016589 GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094
EMBL:CH473968 HOGENOM:HOG000160330 CTD:5928 HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC168994 IPI:IPI00366789
RefSeq:NP_001101382.1 UniGene:Rn.224577 SMR:B5DFB2 STRING:B5DFB2
Ensembl:ENSRNOT00000029177 GeneID:313048 KEGG:rno:313048
NextBio:665530 Genevestigator:B5DFB2 Uniprot:B5DFB2
Length = 425
Score = 311 (114.5 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 83/278 (29%), Positives = 132/278 (47%)
Query: 221 GHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGK-GPGIPTPPLFSFSGHLTEGFAMD 279
G N A + + A +T + ++ K K P P GH EG+ +
Sbjct: 125 GEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLS 184
Query: 280 WSSTEPGVLATGDCKRNIHIW----TPREAGAWQVDQKPL-VGHTNSVEDLQWSPGEKRV 334
W+ G L + I +W P+E VD K + GHT VED+ W + +
Sbjct: 185 WNPNLSGHLLSASDDHTICLWDISAVPKEGKV--VDAKTIFTGHTAVVEDVSWHLLHESL 242
Query: 335 LASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR-TEPLIVSGGDDGCIHVW 393
S + D + IWDTR NT ++ +AHT++VN +S+N +E ++ +G D + +W
Sbjct: 243 FGSVADDQKLMIWDTRSNNTSKPSHSV-DAHTAEVNCLSFNPYSEFILATGSADKTVALW 301
Query: 394 DLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQRE 453
DLR K + +F+ H + V+W P + AS G D ++ +WDL+ + E EQ
Sbjct: 302 DLRNLKL--KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLS--KIGE-EQSP 356
Query: 454 AELKDLPSQLLFIHLGQK-EIKELHWHPQLPGTIISTA 490
+ +D P +LLFIH G +I + W+P P I S +
Sbjct: 357 EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVS 394
Score = 207 (77.9 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 64/258 (24%), Positives = 105/258 (40%)
Query: 160 KGPGIPTP-----PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIW----TPREAG 210
K P P P P GH EG+ + W+ G L + I +W P+E
Sbjct: 156 KHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGK 215
Query: 211 AWQVDQKPL-GGHTNSAEDLQWSDLKTAL-QTVDDPFQLAEHNKKRGKGPGIPTPPLFSF 268
VD K + GHT ED+ W L +L +V D +L + + + P S
Sbjct: 216 V--VDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNN----TSKPSHSV 269
Query: 269 SGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWS 328
H E + ++ +LATG + + +W R ++ H + + +QWS
Sbjct: 270 DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL---KLKLHSFESHKDEIFQVQWS 326
Query: 329 PGEKRVLASCSVDLSIRIWDTRVINTKSC----------MLTLPNAHTSDVNVISWNRTE 378
P + +LAS D + +WD I + +L + HT+ ++ SWN E
Sbjct: 327 PHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNE 386
Query: 379 PLIV-SGGDDGCIHVWDL 395
P ++ S +D + VW +
Sbjct: 387 PWVICSVSEDNIMQVWQM 404
Score = 191 (72.3 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 74/268 (27%), Positives = 113/268 (42%)
Query: 298 HIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSC 357
H P +G D + L GH L W+P L S S D +I +WD + +
Sbjct: 157 HPSKPDPSGECNPDLR-LRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGK 215
Query: 358 ML---TLPNAHTSDVNVISWNRT-EPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAP 413
++ T+ HT+ V +SW+ E L S DD + +WD R + HTA
Sbjct: 216 VVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAE 275
Query: 414 VTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEI 473
V + ++P A+G AD +ALWDL R +LK L S + EI
Sbjct: 276 VNCLSFNPYSEFILATGSADKTVALWDL----------RNLKLK-LHS----FESHKDEI 320
Query: 474 KELHWHPQLPGTIISTANSG--FNIF-----------RTISDLPSQLLFIHLGQK-EIKE 519
++ W P TI++++ + N++ D P +LLFIH G +I +
Sbjct: 321 FQVQWSPHNE-TILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISD 379
Query: 520 LHWHPQLPGTIISTANSGFNIFRTISMS 547
W+P P I S + NI + M+
Sbjct: 380 FSWNPNEPWVICSVSED--NIMQVWQMA 405
>UNIPROTKB|O93377 [details] [associations]
symbol:rbbp4-a "Histone-binding protein RBBP4-A"
species:8355 "Xenopus laevis" [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0007049 GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 HOVERGEN:HBG053236 EMBL:AF073787
EMBL:BC077257 RefSeq:NP_001083811.1 UniGene:Xl.537
ProteinModelPortal:O93377 SMR:O93377 PRIDE:O93377 GeneID:399131
KEGG:xla:399131 CTD:399131 Xenbase:XB-GENE-482006 Uniprot:O93377
Length = 425
Score = 311 (114.5 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 83/278 (29%), Positives = 132/278 (47%)
Query: 221 GHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGK-GPGIPTPPLFSFSGHLTEGFAMD 279
G N A + + A +T + ++ K K P P GH EG+ +
Sbjct: 125 GEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECNPNLRLRGHQKEGYGLS 184
Query: 280 WSSTEPGVLATGDCKRNIHIW----TPREAGAWQVDQKPL-VGHTNSVEDLQWSPGEKRV 334
W+ G L + I +W P+E VD K + GHT VED+ W + +
Sbjct: 185 WNPNLSGNLLSASDDHTICLWDISAVPKEGKV--VDAKTIFTGHTAVVEDVSWHLLHESL 242
Query: 335 LASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR-TEPLIVSGGDDGCIHVW 393
S + D + IWDTR NT ++ +AHT++VN +S+N +E ++ +G D + +W
Sbjct: 243 FGSVADDQKLMIWDTRSNNTSKPSHSV-DAHTAEVNCLSFNPYSEFILATGSADKTVALW 301
Query: 394 DLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQRE 453
DLR K + +F+ H + V+W P + AS G D ++ +WDL+ + E EQ
Sbjct: 302 DLRNLKL--KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLS--KIGE-EQSP 356
Query: 454 AELKDLPSQLLFIHLGQK-EIKELHWHPQLPGTIISTA 490
+ +D P +LLFIH G +I + W+P P I S +
Sbjct: 357 EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVS 394
Score = 208 (78.3 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 64/258 (24%), Positives = 105/258 (40%)
Query: 160 KGPGIPTP-----PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIW----TPREAG 210
K P P P P GH EG+ + W+ G L + I +W P+E
Sbjct: 156 KHPSKPDPSGECNPNLRLRGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDISAVPKEGK 215
Query: 211 AWQVDQKPL-GGHTNSAEDLQWSDLKTAL-QTVDDPFQLAEHNKKRGKGPGIPTPPLFSF 268
VD K + GHT ED+ W L +L +V D +L + + + P S
Sbjct: 216 V--VDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNN----TSKPSHSV 269
Query: 269 SGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWS 328
H E + ++ +LATG + + +W R ++ H + + +QWS
Sbjct: 270 DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL---KLKLHSFESHKDEIFQVQWS 326
Query: 329 PGEKRVLASCSVDLSIRIWDTRVINTKSC----------MLTLPNAHTSDVNVISWNRTE 378
P + +LAS D + +WD I + +L + HT+ ++ SWN E
Sbjct: 327 PHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNE 386
Query: 379 PLIV-SGGDDGCIHVWDL 395
P ++ S +D + VW +
Sbjct: 387 PWVICSVSEDNIMQVWQM 404
Score = 187 (70.9 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 70/251 (27%), Positives = 107/251 (42%)
Query: 315 LVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCML---TLPNAHTSDVNV 371
L GH L W+P L S S D +I +WD + + ++ T+ HT+ V
Sbjct: 173 LRGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVED 232
Query: 372 ISWNRT-EPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASG 430
+SW+ E L S DD + +WD R + HTA V + ++P A+G
Sbjct: 233 VSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATG 292
Query: 431 GADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTA 490
AD +ALWDL R +LK L S + EI ++ W P TI++++
Sbjct: 293 SADKTVALWDL----------RNLKLK-LHS----FESHKDEIFQVQWSPHNE-TILASS 336
Query: 491 NSG--FNIF-----------RTISDLPSQLLFIHLGQK-EIKELHWHPQLPGTIISTANS 536
+ N++ D P +LLFIH G +I + W+P P I S +
Sbjct: 337 GTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED 396
Query: 537 GFNIFRTISMS 547
NI + M+
Sbjct: 397 --NIMQVWQMA 405
>UNIPROTKB|Q6INH0 [details] [associations]
symbol:rbbp4-b "Histone-binding protein RBBP4-B"
species:8355 "Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0006338 "chromatin remodeling" evidence=ISS] [GO:0031497
"chromatin assembly" evidence=ISS] [GO:0033186 "CAF-1 complex"
evidence=ISS] [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0006338 GO:GO:0007049 GO:GO:0035098
GO:GO:0031497 GO:GO:0033186 KO:K10752 InterPro:IPR022052
Pfam:PF12265 HOVERGEN:HBG053236 EMBL:BC072311 RefSeq:NP_001085185.1
UniGene:Xl.86906 ProteinModelPortal:Q6INH0 SMR:Q6INH0 PRIDE:Q6INH0
DNASU:432269 GeneID:432269 KEGG:xla:432269 CTD:432269
Xenbase:XB-GENE-6255728 Uniprot:Q6INH0
Length = 425
Score = 308 (113.5 bits), Expect = 1.2e-25, P = 1.2e-25
Identities = 83/278 (29%), Positives = 132/278 (47%)
Query: 221 GHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGK-GPGIPTPPLFSFSGHLTEGFAMD 279
G N A + + A +T + ++ K K P P GH EG+ +
Sbjct: 125 GEVNRARYMPQNPCIIATKTPSCDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLS 184
Query: 280 WSSTEPGVLATGDCKRNIHIW----TPREAGAWQVDQKPL-VGHTNSVEDLQWSPGEKRV 334
W+ G L + I +W P+E VD K + GHT VED+ W + +
Sbjct: 185 WNPNLSGNLLSASDDHTICLWDISAVPKEGKV--VDAKTIFTGHTAVVEDVSWHLLHESL 242
Query: 335 LASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR-TEPLIVSGGDDGCIHVW 393
S + D + IWDTR NT ++ +AHT++VN +S+N +E ++ +G D + +W
Sbjct: 243 FGSVADDQKLMIWDTRSNNTSKPSHSV-DAHTAEVNCLSFNPYSEFILATGSADKTVALW 301
Query: 394 DLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQRE 453
DLR K + +F+ H + V+W P + AS G D ++ +WDL+ + E EQ
Sbjct: 302 DLRNLKL--KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLS--KIGE-EQSP 356
Query: 454 AELKDLPSQLLFIHLGQK-EIKELHWHPQLPGTIISTA 490
+ +D P +LLFIH G +I + W+P P I S +
Sbjct: 357 EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVS 394
Score = 207 (77.9 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 64/258 (24%), Positives = 105/258 (40%)
Query: 160 KGPGIPTP-----PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIW----TPREAG 210
K P P P P GH EG+ + W+ G L + I +W P+E
Sbjct: 156 KHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDISAVPKEGK 215
Query: 211 AWQVDQKPL-GGHTNSAEDLQWSDLKTAL-QTVDDPFQLAEHNKKRGKGPGIPTPPLFSF 268
VD K + GHT ED+ W L +L +V D +L + + + P S
Sbjct: 216 V--VDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNN----TSKPSHSV 269
Query: 269 SGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWS 328
H E + ++ +LATG + + +W R ++ H + + +QWS
Sbjct: 270 DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL---KLKLHSFESHKDEIFQVQWS 326
Query: 329 PGEKRVLASCSVDLSIRIWDTRVINTKSC----------MLTLPNAHTSDVNVISWNRTE 378
P + +LAS D + +WD I + +L + HT+ ++ SWN E
Sbjct: 327 PHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNE 386
Query: 379 PLIV-SGGDDGCIHVWDL 395
P ++ S +D + VW +
Sbjct: 387 PWVICSVSEDNIMQVWQM 404
Score = 191 (72.3 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 74/268 (27%), Positives = 113/268 (42%)
Query: 298 HIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSC 357
H P +G D + L GH L W+P L S S D +I +WD + +
Sbjct: 157 HPSKPDPSGECNPDLR-LRGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDISAVPKEGK 215
Query: 358 ML---TLPNAHTSDVNVISWNRT-EPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAP 413
++ T+ HT+ V +SW+ E L S DD + +WD R + HTA
Sbjct: 216 VVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAE 275
Query: 414 VTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEI 473
V + ++P A+G AD +ALWDL R +LK L S + EI
Sbjct: 276 VNCLSFNPYSEFILATGSADKTVALWDL----------RNLKLK-LHS----FESHKDEI 320
Query: 474 KELHWHPQLPGTIISTANSG--FNIF-----------RTISDLPSQLLFIHLGQK-EIKE 519
++ W P TI++++ + N++ D P +LLFIH G +I +
Sbjct: 321 FQVQWSPHNE-TILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISD 379
Query: 520 LHWHPQLPGTIISTANSGFNIFRTISMS 547
W+P P I S + NI + M+
Sbjct: 380 FSWNPNEPWVICSVSED--NIMQVWQMA 405
>ZFIN|ZDB-GENE-030131-445 [details] [associations]
symbol:rbb4 "retinoblastoma binding protein 4"
species:7955 "Danio rerio" [GO:0033186 "CAF-1 complex"
evidence=ISS] [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0006338 "chromatin
remodeling" evidence=ISS] [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-445
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BX465206
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
IPI:IPI00995625 Ensembl:ENSDART00000130326 ArrayExpress:E7FEX2
Bgee:E7FEX2 Uniprot:E7FEX2
Length = 444
Score = 312 (114.9 bits), Expect = 1.3e-25, P = 1.3e-25
Identities = 86/279 (30%), Positives = 134/279 (48%)
Query: 221 GHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGK-GP-GIPTPPLFSFSGHLTEGFAM 278
G N A + + A +T + ++ K K P G TP L GH EG+ +
Sbjct: 125 GEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECTPDL-RLRGHQKEGYGL 183
Query: 279 DWSSTEPGVLATGDCKRNIHIW----TPREAGAWQVDQKPL-VGHTNSVEDLQWSPGEKR 333
W+ G L + I +W P+E VD K + GHT VED+ W +
Sbjct: 184 SWNPNLSGCLLSASDDHTICLWDISTVPKEGKI--VDAKTIFTGHTAVVEDVSWHLLHES 241
Query: 334 VLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR-TEPLIVSGGDDGCIHV 392
+ S + D + IWDTR NT + +AHT++VN +S+N +E ++ +G D + +
Sbjct: 242 LFGSVADDQKLMIWDTRSNNTSKPSHAV-DAHTAEVNCLSFNPYSEFILATGSADKTVAL 300
Query: 393 WDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQR 452
WDLR K + +F+ H + V+W P + AS G D ++ +WDL+ + E EQ
Sbjct: 301 WDLRNLKL--KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLS--KIGE-EQS 355
Query: 453 EAELKDLPSQLLFIHLGQK-EIKELHWHPQLPGTIISTA 490
+ +D P +LLFIH G +I + W+P P I S +
Sbjct: 356 PEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVS 394
Score = 209 (78.6 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 65/264 (24%), Positives = 108/264 (40%)
Query: 149 FQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIW---- 204
F +H K G TP L GH EG+ + W+ G L + I +W
Sbjct: 152 FDYTKHPSKPDPS-GECTPDL-RLRGHQKEGYGLSWNPNLSGCLLSASDDHTICLWDIST 209
Query: 205 TPREAGAWQVDQKPL-GGHTNSAEDLQWSDLKTAL-QTVDDPFQLAEHNKKRGKGPGIPT 262
P+E VD K + GHT ED+ W L +L +V D +L + + +
Sbjct: 210 VPKEGKI--VDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNN----TS 263
Query: 263 PPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSV 322
P + H E + ++ +LATG + + +W R ++ H + +
Sbjct: 264 KPSHAVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL---KLKLHSFESHKDEI 320
Query: 323 EDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSC----------MLTLPNAHTSDVNVI 372
+QWSP + +LAS D + +WD I + +L + HT+ ++
Sbjct: 321 FQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDF 380
Query: 373 SWNRTEPLIV-SGGDDGCIHVWDL 395
SWN EP ++ S +D + VW +
Sbjct: 381 SWNPNEPWVICSVSEDNIMQVWQM 404
Score = 191 (72.3 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 74/268 (27%), Positives = 112/268 (41%)
Query: 298 HIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSC 357
H P +G D + L GH L W+P L S S D +I +WD + +
Sbjct: 157 HPSKPDPSGECTPDLR-LRGHQKEGYGLSWNPNLSGCLLSASDDHTICLWDISTVPKEGK 215
Query: 358 ML---TLPNAHTSDVNVISWNRT-EPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAP 413
++ T+ HT+ V +SW+ E L S DD + +WD R HTA
Sbjct: 216 IVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAE 275
Query: 414 VTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEI 473
V + ++P A+G AD +ALWDL R +LK L S + EI
Sbjct: 276 VNCLSFNPYSEFILATGSADKTVALWDL----------RNLKLK-LHS----FESHKDEI 320
Query: 474 KELHWHPQLPGTIISTANSG--FNIF-----------RTISDLPSQLLFIHLGQK-EIKE 519
++ W P TI++++ + N++ D P +LLFIH G +I +
Sbjct: 321 FQVQWSPHNE-TILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISD 379
Query: 520 LHWHPQLPGTIISTANSGFNIFRTISMS 547
W+P P I S + NI + M+
Sbjct: 380 FSWNPNEPWVICSVSED--NIMQVWQMA 405
>ZFIN|ZDB-GENE-030131-848 [details] [associations]
symbol:rbb4l "retinoblastoma binding protein 4,
like" species:7955 "Danio rerio" [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-030131-848 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0035098
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 HOGENOM:HOG000160330 HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC052110 EMBL:BC067546 IPI:IPI00996854
RefSeq:NP_997775.1 UniGene:Dr.75908 ProteinModelPortal:Q7ZTY4
SMR:Q7ZTY4 STRING:Q7ZTY4 PRIDE:Q7ZTY4 Ensembl:ENSDART00000008144
GeneID:322129 KEGG:dre:322129 CTD:322129 NextBio:20807686
ArrayExpress:Q7ZTY4 Bgee:Q7ZTY4 Uniprot:Q7ZTY4
Length = 426
Score = 308 (113.5 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 83/278 (29%), Positives = 131/278 (47%)
Query: 221 GHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGK-GPGIPTPPLFSFSGHLTEGFAMD 279
G N A + + A +T ++ K K P P GH EG+ +
Sbjct: 125 GEVNRARYMPQNPCIIATKTPTSDVLAFDYTKHPSKPDPSGDCSPDLRLRGHQKEGYGLS 184
Query: 280 WSSTEPGVLATGDCKRNIHIW----TPREAGAWQVDQKPL-VGHTNSVEDLQWSPGEKRV 334
W+ G L + I +W P+E VD K + GHT VED+ W + +
Sbjct: 185 WNPNLSGNLLSASDDHTICLWDISGAPKEGKI--VDAKTIFTGHTAVVEDVSWHLLHESL 242
Query: 335 LASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR-TEPLIVSGGDDGCIHVW 393
S + D + IWDTR NT ++ +AHT++VN +S+N +E ++ +G D + +W
Sbjct: 243 FGSVADDQKLMIWDTRSNNTSKPSHSV-DAHTAEVNCLSFNPYSEFILATGSADKTVALW 301
Query: 394 DLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQRE 453
DLR K + +F+ H + V+W P + AS G D ++ +WDL+ + E EQ
Sbjct: 302 DLRNLKL--KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLS--KIGE-EQSA 356
Query: 454 AELKDLPSQLLFIHLGQK-EIKELHWHPQLPGTIISTA 490
+ +D P +LLFIH G +I + W+P P I S +
Sbjct: 357 EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVS 394
Score = 207 (77.9 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 64/264 (24%), Positives = 106/264 (40%)
Query: 149 FQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIW---- 204
F +H K P P GH EG+ + W+ G L + I +W
Sbjct: 152 FDYTKHPSK--PDPSGDCSPDLRLRGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDISG 209
Query: 205 TPREAGAWQVDQKPL-GGHTNSAEDLQWSDLKTAL-QTVDDPFQLAEHNKKRGKGPGIPT 262
P+E VD K + GHT ED+ W L +L +V D +L + + +
Sbjct: 210 APKEGKI--VDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNN----TS 263
Query: 263 PPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSV 322
P S H E + ++ +LATG + + +W R ++ H + +
Sbjct: 264 KPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL---KLKLHSFESHKDEI 320
Query: 323 EDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSC----------MLTLPNAHTSDVNVI 372
+QWSP + +LAS D + +WD I + +L + HT+ ++
Sbjct: 321 FQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDF 380
Query: 373 SWNRTEPLIV-SGGDDGCIHVWDL 395
SWN EP ++ S +D + VW +
Sbjct: 381 SWNPNEPWVICSVSEDNIMQVWQM 404
Score = 183 (69.5 bits), Expect = 8.1e-11, P = 8.1e-11
Identities = 74/268 (27%), Positives = 112/268 (41%)
Query: 298 HIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSC 357
H P +G D + L GH L W+P L S S D +I +WD +
Sbjct: 157 HPSKPDPSGDCSPDLR-LRGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDISGAPKEGK 215
Query: 358 ML---TLPNAHTSDVNVISWNRT-EPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAP 413
++ T+ HT+ V +SW+ E L S DD + +WD R + HTA
Sbjct: 216 IVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAE 275
Query: 414 VTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEI 473
V + ++P A+G AD +ALWDL R +LK L S + EI
Sbjct: 276 VNCLSFNPYSEFILATGSADKTVALWDL----------RNLKLK-LHS----FESHKDEI 320
Query: 474 KELHWHPQLPGTIISTANSG--FNIF-----------RTISDLPSQLLFIHLGQK-EIKE 519
++ W P TI++++ + N++ D P +LLFIH G +I +
Sbjct: 321 FQVQWSPHNE-TILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISD 379
Query: 520 LHWHPQLPGTIISTANSGFNIFRTISMS 547
W+P P I S + NI + M+
Sbjct: 380 FSWNPNEPWVICSVSED--NIMQVWQMA 405
>WB|WBGene00004312 [details] [associations]
symbol:rba-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0001703 "gastrulation with
mouth forming first" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0016246 "RNA interference" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0045138 "tail tip
morphogenesis" evidence=IMP] [GO:0001708 "cell fate specification"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0001708 GO:GO:0009792 GO:GO:0006915
GO:GO:0016246 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0006351
GO:GO:0016568 GO:GO:0040035 GO:GO:0045138
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0001703 HOGENOM:HOG000160330 EMBL:Z81097
OMA:MPDVTKT PIR:T23385 RefSeq:NP_492551.1 ProteinModelPortal:P90917
SMR:P90917 STRING:P90917 PaxDb:P90917 EnsemblMetazoa:K07A1.11.1
EnsemblMetazoa:K07A1.11.2 GeneID:172801 KEGG:cel:CELE_K07A1.11
UCSC:K07A1.11 CTD:172801 WormBase:K07A1.11 InParanoid:P90917
NextBio:877059 Uniprot:P90917
Length = 412
Score = 289 (106.8 bits), Expect = 2.8e-25, Sum P(2) = 2.8e-25
Identities = 77/288 (26%), Positives = 132/288 (45%)
Query: 209 AGAWQVDQK-PLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFS 267
A W + K G + A + + A + D + ++ K + P
Sbjct: 107 AAKWDTEIKINHPGEVHRARYMPHNPFIIASRGPSDDVYIFDYTKHPSEPKDTKFRPQLR 166
Query: 268 FSGHLTEGFAMDWSSTEPGVLAT-GDCKRNIHIW--TPREAGAWQ-VDQKPLVGHTNSVE 323
GH EG+ M WS+T G L T GD H W + + Q V Q GH+++ E
Sbjct: 167 LKGHEGEGYGMSWSNTREGHLLTAGDDGMICH-WDINANQTISGQIVPQSKFKGHSSNAE 225
Query: 324 DLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR-TEPLIV 382
D+ + V S D + +WD R +K + + HT++VN I++N +E ++
Sbjct: 226 DVSFHALHNFVFGSVGDDRKLNLWDLR--QSKPQLTAV--GHTAEVNCITFNPFSEYILA 281
Query: 383 SGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442
+G D + +WD+R +K + T KHH + V + P + AS G+DD++ +WD++
Sbjct: 282 TGSVDKTVALWDMRNMRK--KMYTLKHHNDEIFQVSFSPHYETVLASSGSDDRVIVWDIS 339
Query: 443 VERDSEIEQREAELKDLPSQLLFIHLGQK-EIKELHWHPQLPGTIIST 489
+D A +P +++FIH G ++ + W+P P TI S+
Sbjct: 340 KIQDPS-SSSAASSDSVPPEVIFIHAGHTGKVADFSWNPNRPWTICSS 386
Score = 185 (70.2 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 64/257 (24%), Positives = 112/257 (43%)
Query: 216 QKPLGGHTNSAEDLQWSDLKTA-LQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTE 274
Q L GH + WS+ + L T D + + + P F GH +
Sbjct: 164 QLRLKGHEGEGYGMSWSNTREGHLLTAGDDGMICHWDINANQTISGQIVPQSKFKGHSSN 223
Query: 275 GFAMDWSSTEPGVLAT-GDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKR 333
+ + + V + GD R +++W R++ Q VGHT V + ++P +
Sbjct: 224 AEDVSFHALHNFVFGSVGD-DRKLNLWDLRQSKP----QLTAVGHTAEVNCITFNPFSEY 278
Query: 334 VLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWN-RTEPLIVSGGDDGCIHV 392
+LA+ SVD ++ +WD R N + M TL + H ++ +S++ E ++ S G D + V
Sbjct: 279 ILATGSVDKTVALWDMR--NMRKKMYTLKH-HNDEIFQVSFSPHYETVLASSGSDDRVIV 335
Query: 393 WDLRRFK--KGSSVAT---------FKH--HTAPVTTVEWHPTESSTFASGGADDQIALW 439
WD+ + + SS A+ F H HT V W+P T S + + +W
Sbjct: 336 WDISKIQDPSSSSAASSDSVPPEVIFIHAGHTGKVADFSWNPNRPWTICSSDEFNALQVW 395
Query: 440 DLAVERDSEIEQREAEL 456
+++ S E+ E E+
Sbjct: 396 EVSNSLVSS-EKWETEM 411
Score = 169 (64.5 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 62/246 (25%), Positives = 100/246 (40%)
Query: 168 PLFSFSGHLTEGFAMDWSSTEPGVLAT-GDCKRNIHIW--TPREAGAWQ-VDQKPLGGHT 223
P GH EG+ M WS+T G L T GD H W + + Q V Q GH+
Sbjct: 163 PQLRLKGHEGEGYGMSWSNTREGHLLTAGDDGMICH-WDINANQTISGQIVPQSKFKGHS 221
Query: 224 NSAEDLQWSDLKT-ALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSS 282
++AED+ + L +V D +L + ++ K P + GH E + ++
Sbjct: 222 SNAEDVSFHALHNFVFGSVGDDRKLNLWDLRQSK-------PQLTAVGHTAEVNCITFNP 274
Query: 283 TEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDL 342
+LATG + + +W R + L H + + + +SP + VLAS D
Sbjct: 275 FSEYILATGSVDKTVALWDMRNM---RKKMYTLKHHNDEIFQVSFSPHYETVLASSGSDD 331
Query: 343 SIRIWDTRVINTKSC------------MLTLPNAHTSDVNVISWNRTEPLIVSGGDD-GC 389
+ +WD I S ++ + HT V SWN P + D+
Sbjct: 332 RVIVWDISKIQDPSSSSAASSDSVPPEVIFIHAGHTGKVADFSWNPNRPWTICSSDEFNA 391
Query: 390 IHVWDL 395
+ VW++
Sbjct: 392 LQVWEV 397
Score = 161 (61.7 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 62/249 (24%), Positives = 104/249 (41%)
Query: 312 QKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNA----HTS 367
Q L GH + WS + L + D I WD T S + +P + H+S
Sbjct: 164 QLRLKGHEGEGYGMSWSNTREGHLLTAGDDGMICHWDINANQTISGQI-VPQSKFKGHSS 222
Query: 368 DVNVISWNRTEPLIV-SGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESST 426
+ +S++ + S GDD +++WDLR+ K T HTA V + ++P
Sbjct: 223 NAEDVSFHALHNFVFGSVGDDRKLNLWDLRQSKPQ---LTAVGHTAEVNCITFNPFSEYI 279
Query: 427 FASGGADDQIALWDLAVERDS--EIEQREAELKDL---PSQLLFIHLGQKEIKELHWHPQ 481
A+G D +ALWD+ R ++ E+ + P + + + + W
Sbjct: 280 LATGSVDKTVALWDMRNMRKKMYTLKHHNDEIFQVSFSPHYETVLASSGSDDRVIVWD-- 337
Query: 482 LPGTIISTANSGFNIFRTISD-LPSQLLFIHLGQK-EIKELHWHPQLPGTIISTANSGFN 539
IS + SD +P +++FIH G ++ + W+P P TI S+ FN
Sbjct: 338 -----ISKIQDPSSSSAASSDSVPPEVIFIHAGHTGKVADFSWNPNRPWTICSSDE--FN 390
Query: 540 IFRTISMSN 548
+ +SN
Sbjct: 391 ALQVWEVSN 399
Score = 57 (25.1 bits), Expect = 2.8e-25, Sum P(2) = 2.8e-25
Identities = 12/30 (40%), Positives = 14/30 (46%)
Query: 733 GHTNSVEDLQWSPGEKRVLASCSVDRSNRI 762
GHT V D W+P R CS D N +
Sbjct: 365 GHTGKVADFSWNPN--RPWTICSSDEFNAL 392
>UNIPROTKB|E2RM67 [details] [associations]
symbol:RBBP7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070370 "cellular heat acclimation"
evidence=IEA] [GO:0035098 "ESC/E(Z) complex" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000122 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 OMA:DGFLLHV CTD:5931 KO:K11659 EMBL:AAEX03026166
GeneID:480854 KEGG:cfa:480854 NextBio:20855780 RefSeq:XP_849201.1
ProteinModelPortal:E2RM67 Ensembl:ENSCAFT00000020227 Uniprot:E2RM67
Length = 469
Score = 312 (114.9 bits), Expect = 2.9e-25, P = 2.9e-25
Identities = 85/278 (30%), Positives = 132/278 (47%)
Query: 221 GHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGK-GPGIPTPPLFSFSGHLTEGFAMD 279
G N A + + A +T + ++ K K P P GH EG+ +
Sbjct: 168 GEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLS 227
Query: 280 WSSTEPGVLATGDCKRNIHIWT----PREAGAWQVDQKPL-VGHTNSVEDLQWSPGEKRV 334
W+S G L + + +W P+E VD K + GH+ VED+ W + +
Sbjct: 228 WNSNLSGHLLSASDDHTVCLWDINAGPKEGKI--VDAKAIFTGHSAVVEDVAWHLLHESL 285
Query: 335 LASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR-TEPLIVSGGDDGCIHVW 393
S + D + IWDTR NT S L +AHT++VN +S+N +E ++ +G D + +W
Sbjct: 286 FGSVADDQKLMIWDTRS-NTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 344
Query: 394 DLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQRE 453
DLR K + TF+ H + V W P + AS G D ++ +WDL+ + E EQ
Sbjct: 345 DLRNLKL--KLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS--KIGE-EQSA 399
Query: 454 AELKDLPSQLLFIHLGQK-EIKELHWHPQLPGTIISTA 490
+ +D P +LLFIH G +I + W+P P I S +
Sbjct: 400 EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVS 437
Score = 191 (72.3 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 60/258 (23%), Positives = 104/258 (40%)
Query: 160 KGPGIPTP-----PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWT----PREAG 210
K P P P P GH EG+ + W+S G L + + +W P+E
Sbjct: 199 KHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGK 258
Query: 211 AWQVDQKPL-GGHTNSAEDLQWSDLKTAL-QTVDDPFQLAEHNKKRGKGPGIPTPPLFSF 268
VD K + GH+ ED+ W L +L +V D +L + + + P
Sbjct: 259 I--VDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNT----TSKPSHLV 312
Query: 269 SGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWS 328
H E + ++ +LATG + + +W R ++ H + + + WS
Sbjct: 313 DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL---KLKLHTFESHKDEIFQVHWS 369
Query: 329 PGEKRVLASCSVDLSIRIWDTRVINTKSC----------MLTLPNAHTSDVNVISWNRTE 378
P + +LAS D + +WD I + +L + HT+ ++ SWN E
Sbjct: 370 PHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNE 429
Query: 379 PLIV-SGGDDGCIHVWDL 395
P ++ S +D + +W +
Sbjct: 430 PWVICSVSEDNIMQIWQM 447
Score = 168 (64.2 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 69/268 (25%), Positives = 109/268 (40%)
Query: 298 HIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSC 357
H P +G D + L GH L W+ L S S D ++ +WD +
Sbjct: 200 HPAKPDPSGECNPDLR-LRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGK 258
Query: 358 ML---TLPNAHTSDVNVISWNRT-EPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAP 413
++ + H++ V ++W+ E L S DD + +WD R HTA
Sbjct: 259 IVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAE 318
Query: 414 VTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEI 473
V + ++P A+G AD +ALWDL R +LK L + EI
Sbjct: 319 VNCLSFNPYSEFILATGSADKTVALWDL----------RNLKLK-----LHTFESHKDEI 363
Query: 474 KELHWHPQLPGTIISTANSG--FNIF-----------RTISDLPSQLLFIHLGQK-EIKE 519
++HW P TI++++ + N++ D P +LLFIH G +I +
Sbjct: 364 FQVHWSPHNE-TILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISD 422
Query: 520 LHWHPQLPGTIISTANSGFNIFRTISMS 547
W+P P I S + NI + M+
Sbjct: 423 FSWNPNEPWVICSVSED--NIMQIWQMA 448
>UNIPROTKB|I3LV46 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00570000079069
InterPro:IPR022052 Pfam:PF12265 OMA:DGFLLHV KO:K11659 EMBL:CU463287
GeneID:100519001 KEGG:ssc:100519001 RefSeq:XP_003360284.1
Ensembl:ENSSSCT00000024779 Uniprot:I3LV46
Length = 469
Score = 312 (114.9 bits), Expect = 2.9e-25, P = 2.9e-25
Identities = 85/278 (30%), Positives = 132/278 (47%)
Query: 221 GHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGK-GPGIPTPPLFSFSGHLTEGFAMD 279
G N A + + A +T + ++ K K P P GH EG+ +
Sbjct: 168 GEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLS 227
Query: 280 WSSTEPGVLATGDCKRNIHIWT----PREAGAWQVDQKPL-VGHTNSVEDLQWSPGEKRV 334
W+S G L + + +W P+E VD K + GH+ VED+ W + +
Sbjct: 228 WNSNLSGHLLSASDDHTVCLWDINAGPKEGKI--VDAKAIFTGHSAVVEDVAWHLLHESL 285
Query: 335 LASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR-TEPLIVSGGDDGCIHVW 393
S + D + IWDTR NT S L +AHT++VN +S+N +E ++ +G D + +W
Sbjct: 286 FGSVADDQKLMIWDTRS-NTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 344
Query: 394 DLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQRE 453
DLR K + TF+ H + V W P + AS G D ++ +WDL+ + E EQ
Sbjct: 345 DLRNLKL--KLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS--KIGE-EQSA 399
Query: 454 AELKDLPSQLLFIHLGQK-EIKELHWHPQLPGTIISTA 490
+ +D P +LLFIH G +I + W+P P I S +
Sbjct: 400 EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVS 437
Score = 191 (72.3 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 60/258 (23%), Positives = 104/258 (40%)
Query: 160 KGPGIPTP-----PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWT----PREAG 210
K P P P P GH EG+ + W+S G L + + +W P+E
Sbjct: 199 KHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGK 258
Query: 211 AWQVDQKPL-GGHTNSAEDLQWSDLKTAL-QTVDDPFQLAEHNKKRGKGPGIPTPPLFSF 268
VD K + GH+ ED+ W L +L +V D +L + + + P
Sbjct: 259 I--VDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNT----TSKPSHLV 312
Query: 269 SGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWS 328
H E + ++ +LATG + + +W R ++ H + + + WS
Sbjct: 313 DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL---KLKLHTFESHKDEIFQVHWS 369
Query: 329 PGEKRVLASCSVDLSIRIWDTRVINTKSC----------MLTLPNAHTSDVNVISWNRTE 378
P + +LAS D + +WD I + +L + HT+ ++ SWN E
Sbjct: 370 PHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNE 429
Query: 379 PLIV-SGGDDGCIHVWDL 395
P ++ S +D + +W +
Sbjct: 430 PWVICSVSEDNIMQIWQM 447
Score = 168 (64.2 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 69/268 (25%), Positives = 109/268 (40%)
Query: 298 HIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSC 357
H P +G D + L GH L W+ L S S D ++ +WD +
Sbjct: 200 HPAKPDPSGECNPDLR-LRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGK 258
Query: 358 ML---TLPNAHTSDVNVISWNRT-EPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAP 413
++ + H++ V ++W+ E L S DD + +WD R HTA
Sbjct: 259 IVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAE 318
Query: 414 VTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEI 473
V + ++P A+G AD +ALWDL R +LK L + EI
Sbjct: 319 VNCLSFNPYSEFILATGSADKTVALWDL----------RNLKLK-----LHTFESHKDEI 363
Query: 474 KELHWHPQLPGTIISTANSG--FNIF-----------RTISDLPSQLLFIHLGQK-EIKE 519
++HW P TI++++ + N++ D P +LLFIH G +I +
Sbjct: 364 FQVHWSPHNE-TILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISD 422
Query: 520 LHWHPQLPGTIISTANSGFNIFRTISMS 547
W+P P I S + NI + M+
Sbjct: 423 FSWNPNEPWVICSVSED--NIMQIWQMA 448
>UNIPROTKB|Q6P315 [details] [associations]
symbol:rbbp7 "Histone-binding protein RBBP7" species:8364
"Xenopus (Silurana) tropicalis" [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
OMA:DGFLLHV HOVERGEN:HBG053236 CTD:5931 KO:K11659 EMBL:BC064219
RefSeq:NP_989285.1 UniGene:Str.17153 ProteinModelPortal:Q6P315
SMR:Q6P315 STRING:Q6P315 Ensembl:ENSXETT00000002157 GeneID:394900
KEGG:xtr:394900 Xenbase:XB-GENE-487909 InParanoid:Q6P315
Uniprot:Q6P315
Length = 425
Score = 304 (112.1 bits), Expect = 5.6e-25, P = 5.6e-25
Identities = 83/278 (29%), Positives = 131/278 (47%)
Query: 221 GHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGK-GPGIPTPPLFSFSGHLTEGFAMD 279
G N A + + A +T + ++ K K P P GH EG+ +
Sbjct: 124 GEVNRARYMPQNPCIIATKTPSADVLVFDYTKHPSKPDPSGDCSPDLRLRGHQKEGYGLS 183
Query: 280 WSSTEPGVLATGDCKRNIHIWT----PREAGAWQVDQKPL-VGHTNSVEDLQWSPGEKRV 334
W+S G L + + +W P+E VD K + GH+ VED+ W + +
Sbjct: 184 WNSNLSGHLLSASDDHTVCLWDISAGPKEGKV--VDAKAIFTGHSAVVEDVAWHLLHESL 241
Query: 335 LASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR-TEPLIVSGGDDGCIHVW 393
S + D + IWDTR NT S +AHT++VN +S+N +E ++ +G D + +W
Sbjct: 242 FGSVADDQKLMIWDTRS-NTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 300
Query: 394 DLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQRE 453
DLR K + +F+ H + V W P + AS G D ++ +WDL+ + E EQ
Sbjct: 301 DLRNLKL--KLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS--KIGE-EQSA 355
Query: 454 AELKDLPSQLLFIHLGQK-EIKELHWHPQLPGTIISTA 490
+ +D P +LLFIH G +I + W+P P I S +
Sbjct: 356 EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVS 393
Score = 199 (75.1 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 61/264 (23%), Positives = 106/264 (40%)
Query: 149 FQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWT--- 205
F +H K P P GH EG+ + W+S G L + + +W
Sbjct: 151 FDYTKHPSK--PDPSGDCSPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDISA 208
Query: 206 -PREAGAWQVDQKPL-GGHTNSAEDLQWSDLKTAL-QTVDDPFQLAEHNKKRGKGPGIPT 262
P+E VD K + GH+ ED+ W L +L +V D +L + + +
Sbjct: 209 GPKEGKV--VDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNT----TS 262
Query: 263 PPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSV 322
P S H E + ++ +LATG + + +W R ++ H + +
Sbjct: 263 KPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL---KLKLHSFESHKDEI 319
Query: 323 EDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSC----------MLTLPNAHTSDVNVI 372
+ WSP + +LAS D + +WD I + +L + HT+ ++
Sbjct: 320 FQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDF 379
Query: 373 SWNRTEPLIV-SGGDDGCIHVWDL 395
SWN EP ++ S +D + +W +
Sbjct: 380 SWNPNEPWVICSVSEDNIMQIWQM 403
Score = 170 (64.9 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 72/272 (26%), Positives = 113/272 (41%)
Query: 298 HIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDT-------R 350
H P +G D + L GH L W+ L S S D ++ +WD +
Sbjct: 156 HPSKPDPSGDCSPDLR-LRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDISAGPKEGK 214
Query: 351 VINTKSCMLTLPNAHTSDVNVISWNRT-EPLIVSGGDDGCIHVWDLRRFKKGSSVATFKH 409
V++ K+ H++ V ++W+ E L S DD + +WD R +
Sbjct: 215 VVDAKAIF----TGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDA 270
Query: 410 HTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLG 469
HTA V + ++P A+G AD +ALWDL R +LK L S
Sbjct: 271 HTAEVNCLSFNPYSEFILATGSADKTVALWDL----------RNLKLK-LHS----FESH 315
Query: 470 QKEIKELHWHPQLPGTIISTANSG--FNIF-----------RTISDLPSQLLFIHLGQK- 515
+ EI ++HW P TI++++ + N++ D P +LLFIH G
Sbjct: 316 KDEIFQVHWSPHNE-TILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTA 374
Query: 516 EIKELHWHPQLPGTIISTANSGFNIFRTISMS 547
+I + W+P P I S + NI + M+
Sbjct: 375 KISDFSWNPNEPWVICSVSED--NIMQIWQMA 404
>UNIPROTKB|Q8AVH1 [details] [associations]
symbol:rbbp7 "Histone-binding protein RBBP7" species:8355
"Xenopus laevis" [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0035098 InterPro:IPR022052
Pfam:PF12265 HOVERGEN:HBG053236 CTD:5931 KO:K11659 EMBL:BC042283
RefSeq:NP_001080364.1 UniGene:Xl.55215 ProteinModelPortal:Q8AVH1
SMR:Q8AVH1 PRIDE:Q8AVH1 GeneID:380056 KEGG:xla:380056
Xenbase:XB-GENE-487913 Uniprot:Q8AVH1
Length = 425
Score = 303 (111.7 bits), Expect = 8.4e-25, P = 8.4e-25
Identities = 83/278 (29%), Positives = 131/278 (47%)
Query: 221 GHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGK-GPGIPTPPLFSFSGHLTEGFAMD 279
G N A + + A +T + ++ K K P P GH EG+ +
Sbjct: 124 GEVNRARYMPQNPCIIATKTPSADVLVFDYTKHPSKPDPSGECSPDLRLRGHQKEGYGLS 183
Query: 280 WSSTEPGVLATGDCKRNIHIWT----PREAGAWQVDQKPL-VGHTNSVEDLQWSPGEKRV 334
W+S G L + + +W P+E VD K + GH+ VED+ W + +
Sbjct: 184 WNSNLSGHLLSASDDHTVCLWDISAGPKEGKV--VDAKAVFTGHSAVVEDVAWHLLHESL 241
Query: 335 LASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR-TEPLIVSGGDDGCIHVW 393
S + D + IWDTR NT S +AHT++VN +S+N +E ++ +G D + +W
Sbjct: 242 FGSVADDQKLMIWDTRS-NTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 300
Query: 394 DLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQRE 453
DLR K + +F+ H + V W P + AS G D ++ +WDL+ + E EQ
Sbjct: 301 DLRNLKL--KLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS--KIGE-EQSA 355
Query: 454 AELKDLPSQLLFIHLGQK-EIKELHWHPQLPGTIISTA 490
+ +D P +LLFIH G +I + W+P P I S +
Sbjct: 356 EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVS 393
Score = 198 (74.8 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 61/264 (23%), Positives = 106/264 (40%)
Query: 149 FQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWT--- 205
F +H K P P GH EG+ + W+S G L + + +W
Sbjct: 151 FDYTKHPSK--PDPSGECSPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDISA 208
Query: 206 -PREAGAWQVDQKPL-GGHTNSAEDLQWSDLKTAL-QTVDDPFQLAEHNKKRGKGPGIPT 262
P+E VD K + GH+ ED+ W L +L +V D +L + + +
Sbjct: 209 GPKEGKV--VDAKAVFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNT----TS 262
Query: 263 PPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSV 322
P S H E + ++ +LATG + + +W R ++ H + +
Sbjct: 263 KPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL---KLKLHSFESHKDEI 319
Query: 323 EDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSC----------MLTLPNAHTSDVNVI 372
+ WSP + +LAS D + +WD I + +L + HT+ ++
Sbjct: 320 FQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDF 379
Query: 373 SWNRTEPLIV-SGGDDGCIHVWDL 395
SWN EP ++ S +D + +W +
Sbjct: 380 SWNPNEPWVICSVSEDNIMQIWQM 403
Score = 171 (65.3 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 72/272 (26%), Positives = 113/272 (41%)
Query: 298 HIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDT-------R 350
H P +G D + L GH L W+ L S S D ++ +WD +
Sbjct: 156 HPSKPDPSGECSPDLR-LRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDISAGPKEGK 214
Query: 351 VINTKSCMLTLPNAHTSDVNVISWNRT-EPLIVSGGDDGCIHVWDLRRFKKGSSVATFKH 409
V++ K+ H++ V ++W+ E L S DD + +WD R +
Sbjct: 215 VVDAKAVF----TGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDA 270
Query: 410 HTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLG 469
HTA V + ++P A+G AD +ALWDL R +LK L S
Sbjct: 271 HTAEVNCLSFNPYSEFILATGSADKTVALWDL----------RNLKLK-LHS----FESH 315
Query: 470 QKEIKELHWHPQLPGTIISTANSG--FNIF-----------RTISDLPSQLLFIHLGQK- 515
+ EI ++HW P TI++++ + N++ D P +LLFIH G
Sbjct: 316 KDEIFQVHWSPHNE-TILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTA 374
Query: 516 EIKELHWHPQLPGTIISTANSGFNIFRTISMS 547
+I + W+P P I S + NI + M+
Sbjct: 375 KISDFSWNPNEPWVICSVSED--NIMQIWQMA 404
>UNIPROTKB|Q5R654 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9601
"Pongo abelii" [GO:0016581 "NuRD complex" evidence=ISS] [GO:0030308
"negative regulation of cell growth" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] [GO:0070370 "cellular heat
acclimation" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0035098 GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 HOVERGEN:HBG053236 EMBL:CR860642 UniGene:Pab.19680
ProteinModelPortal:Q5R654 InParanoid:Q5R654 Uniprot:Q5R654
Length = 426
Score = 300 (110.7 bits), Expect = 2.4e-24, P = 2.4e-24
Identities = 84/279 (30%), Positives = 132/279 (47%)
Query: 221 GHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGK-GPGIPTPPLFSFSGHLTEGFAMD 279
G N A + + A +T + ++ K K P P GH EG+ +
Sbjct: 124 GEVNRARYMPQNPHIIATKTPSSGVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLS 183
Query: 280 WSSTEPGVLATGDCKRNIHIWT----PREAGAWQVDQKPL-VGHTNSVEDLQWSPGEKRV 334
W+S G L + + +W P+E VD K + GH+ VED+ W + +
Sbjct: 184 WNSNLSGHLLSASDDHTVCLWDINAGPKEGKI--VDAKAVFTGHSAVVEDVAWHLLHESL 241
Query: 335 LASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR-TEPLIVSGGDDGCIHVW 393
S + D + +WDTR NT S L +AHT++VN +S+N +E ++ +G D + +W
Sbjct: 242 FGSVADDQKLMMWDTRS-NTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 300
Query: 394 DLRRFKKGSSVATFKHHTAPV-TTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQR 452
DLR K + TF+ H + V W P + AS G D ++ +WDL+ + E EQ
Sbjct: 301 DLRNLKL--KLHTFESHKDEIFQVVHWSPHNETILASSGTDRRLNVWDLS--KIGE-EQS 355
Query: 453 EAELKDLPSQLLFIHLGQK-EIKELHWHPQLPGTIISTA 490
+ +D P +LLFIH G +I + W+P P I S +
Sbjct: 356 AEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVS 394
Score = 184 (69.8 bits), Expect = 6.3e-11, P = 6.3e-11
Identities = 60/259 (23%), Positives = 105/259 (40%)
Query: 160 KGPGIPTP-----PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWT----PREAG 210
K P P P P GH EG+ + W+S G L + + +W P+E
Sbjct: 155 KHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGK 214
Query: 211 AWQVDQKPL-GGHTNSAEDLQWSDLKTAL-QTVDDPFQLAEHNKKRGKGPGIPTPPLFSF 268
VD K + GH+ ED+ W L +L +V D +L + + + P
Sbjct: 215 I--VDAKAVFTGHSAVVEDVAWHLLHESLFGSVADDQKLMMWDTRSNT----TSKPSHLV 268
Query: 269 SGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSV-EDLQW 327
H E + ++ +LATG + + +W R ++ H + + + + W
Sbjct: 269 DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL---KLKLHTFESHKDEIFQVVHW 325
Query: 328 SPGEKRVLASCSVDLSIRIWDTRVINTKSC----------MLTLPNAHTSDVNVISWNRT 377
SP + +LAS D + +WD I + +L + HT+ ++ SWN
Sbjct: 326 SPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPN 385
Query: 378 EPLIV-SGGDDGCIHVWDL 395
EP ++ S +D + +W +
Sbjct: 386 EPWVICSVSEDNIMQIWQM 404
Score = 157 (60.3 bits), Expect = 5.9e-08, P = 5.9e-08
Identities = 70/273 (25%), Positives = 111/273 (40%)
Query: 298 HIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDT-------R 350
H P +G D + L GH L W+ L S S D ++ +WD +
Sbjct: 156 HPAKPDPSGECNPDLR-LRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGK 214
Query: 351 VINTKSCMLTLPNAHTSDVNVISWNRT-EPLIVSGGDDGCIHVWDLRRFKKGSSVATFKH 409
+++ K+ H++ V ++W+ E L S DD + +WD R
Sbjct: 215 IVDAKAVF----TGHSAVVEDVAWHLLHESLFGSVADDQKLMMWDTRSNTTSKPSHLVDA 270
Query: 410 HTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLG 469
HTA V + ++P A+G AD +ALWDL R +LK L
Sbjct: 271 HTAEVNCLSFNPYSEFILATGSADKTVALWDL----------RNLKLK-----LHTFESH 315
Query: 470 QKEIKEL-HWHPQLPGTIISTANSG--FNIF-----------RTISDLPSQLLFIHLGQK 515
+ EI ++ HW P TI++++ + N++ D P +LLFIH G
Sbjct: 316 KDEIFQVVHWSPHNE-TILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHT 374
Query: 516 -EIKELHWHPQLPGTIISTANSGFNIFRTISMS 547
+I + W+P P I S + NI + M+
Sbjct: 375 AKISDFSWNPNEPWVICSVSED--NIMQIWQMA 405
>RGD|1563620 [details] [associations]
symbol:RGD1563620 "similar to retinoblastoma binding protein 4"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1563620 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00570000079069
InterPro:IPR022052 Pfam:PF12265 OrthoDB:EOG4DBTDH IPI:IPI00368073
ProteinModelPortal:D4A250 Ensembl:ENSRNOT00000033132 Uniprot:D4A250
Length = 425
Score = 296 (109.3 bits), Expect = 7.8e-24, P = 7.8e-24
Identities = 81/278 (29%), Positives = 130/278 (46%)
Query: 221 GHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGK-GPGIPTPPLFSFSGHLTEGFAMD 279
G N A + + A +T + ++ K K P GH EG+ +
Sbjct: 125 GEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNSDLHLRGHQKEGYGLS 184
Query: 280 WSSTEPGVLATGDCKRNIHIW----TPREAGAWQVDQKPL-VGHTNSVEDLQWSPGEKRV 334
W+ G L + I +W P+E V K + GHT VED+ W + +
Sbjct: 185 WNPYLSGYLLSASDDHTICLWDISAVPKEGKV--VGAKTIFTGHTAVVEDVSWHLLHESL 242
Query: 335 LASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWN-RTEPLIVSGGDDGCIHVW 393
S + D + IWDTR NT ++ +A+T++VN +S+N +E ++ SG D + +W
Sbjct: 243 FGSVADDQKLMIWDTRSNNTSKPSHSV-DAYTAEVNCLSFNPNSEFILASGSPDKTVALW 301
Query: 394 DLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQRE 453
DLR K + +F+ H + V+W P + AS G D ++ +WDL+ + E EQ
Sbjct: 302 DLRNLKL--KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLS--KIGE-EQSP 356
Query: 454 AELKDLPSQLLFIHLGQK-EIKELHWHPQLPGTIISTA 490
+ +D P +LLFIH G +I + W+P P I S +
Sbjct: 357 EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVS 394
Score = 185 (70.2 bits), Expect = 4.8e-11, P = 4.8e-11
Identities = 56/239 (23%), Positives = 99/239 (41%)
Query: 174 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIW----TPREAGAWQVDQKPL-GGHTNSAED 228
GH EG+ + W+ G L + I +W P+E V K + GHT ED
Sbjct: 175 GHQKEGYGLSWNPYLSGYLLSASDDHTICLWDISAVPKEGKV--VGAKTIFTGHTAVVED 232
Query: 229 LQWSDLKTAL-QTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGV 287
+ W L +L +V D +L + + + P S + E + ++ +
Sbjct: 233 VSWHLLHESLFGSVADDQKLMIWDTRSNN----TSKPSHSVDAYTAEVNCLSFNPNSEFI 288
Query: 288 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIW 347
LA+G + + +W R ++ H + + +QWSP + +LAS D + +W
Sbjct: 289 LASGSPDKTVALWDLRNL---KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVW 345
Query: 348 DTRVINTKSC----------MLTLPNAHTSDVNVISWNRTEPLIV-SGGDDGCIHVWDL 395
D I + +L + HT+ ++ SWN EP ++ S +D + VW +
Sbjct: 346 DLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQM 404
Score = 181 (68.8 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 73/268 (27%), Positives = 111/268 (41%)
Query: 298 HIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSC 357
H P +G D L GH L W+P L S S D +I +WD + +
Sbjct: 157 HPSKPDPSGECNSDLH-LRGHQKEGYGLSWNPYLSGYLLSASDDHTICLWDISAVPKEGK 215
Query: 358 ML---TLPNAHTSDVNVISWNRT-EPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAP 413
++ T+ HT+ V +SW+ E L S DD + +WD R + +TA
Sbjct: 216 VVGAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAYTAE 275
Query: 414 VTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEI 473
V + ++P ASG D +ALWDL R +LK L S + EI
Sbjct: 276 VNCLSFNPNSEFILASGSPDKTVALWDL----------RNLKLK-LHS----FESHKDEI 320
Query: 474 KELHWHPQLPGTIISTANSG--FNIF-----------RTISDLPSQLLFIHLGQK-EIKE 519
++ W P TI++++ + N++ D P +LLFIH G +I +
Sbjct: 321 FQVQWSPHNE-TILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISD 379
Query: 520 LHWHPQLPGTIISTANSGFNIFRTISMS 547
W+P P I S + NI + M+
Sbjct: 380 FSWNPNEPWVICSVSED--NIMQVWQMA 405
>DICTYBASE|DDB_G0282529 [details] [associations]
symbol:rbbD "putative Retinoblastoma (Rb) binding
protein" species:44689 "Dictyostelium discoideum" [GO:0016568
"chromatin modification" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0282529 GO:GO:0005634
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AAFI02000047 GenomeReviews:CM000152_GR
GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 KO:K10752 OMA:CQPDLRL
InterPro:IPR022052 Pfam:PF12265 RefSeq:XP_640105.1
ProteinModelPortal:Q54SD4 SMR:Q54SD4 STRING:Q54SD4 PRIDE:Q54SD4
EnsemblProtists:DDB0232003 GeneID:8623636 KEGG:ddi:DDB_G0282529
ProtClustDB:CLSZ2430461 Uniprot:Q54SD4
Length = 423
Score = 285 (105.4 bits), Expect = 1.9e-22, P = 1.9e-22
Identities = 85/280 (30%), Positives = 131/280 (46%)
Query: 221 GHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTP-----PLFSFSGHLTEG 275
G N A + + A +TV + + K P PTP P +GH EG
Sbjct: 122 GEVNRARVMPQNHSIIATKTVSSEVYIFDTTKH----PLEPTPDGKCSPNLKLTGHKKEG 177
Query: 276 FAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQ--VDQKPLV-GHTNSVEDLQWSPGEK 332
+ + W+ + G L + ++I +W A +D + GHT+ VED+ W
Sbjct: 178 YGISWNPRKEGHLLSCSDDQSICMWDISAASKSDSTLDALNIYNGHTSIVEDVAWHYIHD 237
Query: 333 RVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR-TEPLIVSGGDDGCIH 391
S D + IWDTR TK + + AH S+VN +S+N E L+ +G D +
Sbjct: 238 TFFGSVGDDKKLMIWDTRT-GTKP--IHVVEAHNSEVNCLSFNPFCEFLVATGSTDKTVA 294
Query: 392 VWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQ 451
+WD+R G+ + + HT V V++ P + AS G+D ++ +WDL+ R E EQ
Sbjct: 295 LWDMRNL--GNRLHSLISHTDEVFQVQFSPHNETVLASCGSDRRVNVWDLS--RIGE-EQ 349
Query: 452 REAELKDLPSQLLFIHLGQ-KEIKELHWHPQLPGTIISTA 490
+ D P +LLFIH G +I + W+P P +I S A
Sbjct: 350 NNEDAADGPPELLFIHGGHTSKISDFSWNPNDPWSIASVA 389
Score = 212 (79.7 bits), Expect = 4.8e-14, P = 4.8e-14
Identities = 67/256 (26%), Positives = 110/256 (42%)
Query: 160 KGPGIPTP-----PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQV 214
K P PTP P +GH EG+ + W+ + G L + ++I +W A
Sbjct: 153 KHPLEPTPDGKCSPNLKLTGHKKEGYGISWNPRKEGHLLSCSDDQSICMWDISAASKSDS 212
Query: 215 DQKPLG---GHTNSAEDLQWSDLK-TALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSG 270
L GHT+ ED+ W + T +V D +L + + G T P+
Sbjct: 213 TLDALNIYNGHTSIVEDVAWHYIHDTFFGSVGDDKKLMIWDTRTG------TKPIHVVEA 266
Query: 271 HLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPG 330
H +E + ++ ++ATG + + +W R G L+ HT+ V +Q+SP
Sbjct: 267 HNSEVNCLSFNPFCEFLVATGSTDKTVALWDMRNLGN---RLHSLISHTDEVFQVQFSPH 323
Query: 331 EKRVLASCSVDLSIRIWDTRVI----NTKSC------MLTLPNAHTSDVNVISWNRTEPL 380
+ VLASC D + +WD I N + +L + HTS ++ SWN +P
Sbjct: 324 NETVLASCGSDRRVNVWDLSRIGEEQNNEDAADGPPELLFIHGGHTSKISDFSWNPNDPW 383
Query: 381 -IVSGGDDGCIHVWDL 395
I S +D + +W +
Sbjct: 384 SIASVAEDNILQIWQM 399
Score = 185 (70.2 bits), Expect = 4.8e-11, P = 4.8e-11
Identities = 67/255 (26%), Positives = 110/255 (43%)
Query: 298 HIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVIN-TKS 356
H P G + K L GH + W+P ++ L SCS D SI +WD + + S
Sbjct: 154 HPLEPTPDGKCSPNLK-LTGHKKEGYGISWNPRKEGHLLSCSDDQSICMWDISAASKSDS 212
Query: 357 CM--LTLPNAHTSDVNVISWNRT-EPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAP 413
+ L + N HTS V ++W+ + S GDD + +WD R K V + H +
Sbjct: 213 TLDALNIYNGHTSIVEDVAWHYIHDTFFGSVGDDKKLMIWDTRTGTKPIHVV--EAHNSE 270
Query: 414 VTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEI 473
V + ++P A+G D +ALWD+ + + + ++ Q+ F + +
Sbjct: 271 VNCLSFNPFCEFLVATGSTDKTVALWDMR-NLGNRLHSLISHTDEV-FQVQFSPHNETVL 328
Query: 474 KELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQ-KEIKELHWHPQLPGTIIS 532
++ +S N +D P +LLFIH G +I + W+P P +I S
Sbjct: 329 ASCGSDRRVNVWDLSRIGEEQNN-EDAADGPPELLFIHGGHTSKISDFSWNPNDPWSIAS 387
Query: 533 TANSGFNIFRTISMS 547
A NI + M+
Sbjct: 388 VAED--NILQIWQMA 400
Score = 147 (56.8 bits), Expect = 7.3e-07, P = 7.3e-07
Identities = 60/271 (22%), Positives = 112/271 (41%)
Query: 202 HIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTA-LQTVDDPFQLAEHNKKRGKGPGI 260
H P G + K L GH + W+ K L + D + +
Sbjct: 154 HPLEPTPDGKCSPNLK-LTGHKKEGYGISWNPRKEGHLLSCSDDQSICMWDISAASKSDS 212
Query: 261 PTPPLFSFSGHLTEGFAMDWSSTEPGVLAT-GDCKRNIHIWTPREAGAWQVDQKPLVGHT 319
L ++GH + + W + GD K+ + IW R G + + H
Sbjct: 213 TLDALNIYNGHTSIVEDVAWHYIHDTFFGSVGDDKK-LMIWDTR-TGTKPIHV--VEAHN 268
Query: 320 NSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWN-RTE 378
+ V L ++P + ++A+ S D ++ +WD R + + L +HT +V + ++ E
Sbjct: 269 SEVNCLSFNPFCEFLVATGSTDKTVALWDMRNLGNRLHSLI---SHTDEVFQVQFSPHNE 325
Query: 379 PLIVSGGDDGCIHVWDLRRFKK---------GSSVATFKH--HTAPVTTVEWHPTESSTF 427
++ S G D ++VWDL R + G F H HT+ ++ W+P + +
Sbjct: 326 TVLASCGSDRRVNVWDLSRIGEEQNNEDAADGPPELLFIHGGHTSKISDFSWNPNDPWSI 385
Query: 428 ASGGADDQIALWDLAVERDSEIEQREAELKD 458
AS D+ + +W +A ++ RE +L++
Sbjct: 386 ASVAEDNILQIWQMA---ENIYNDREDDLEN 413
Score = 124 (48.7 bits), Expect = 7.1e-09, Sum P(2) = 7.1e-09
Identities = 39/143 (27%), Positives = 61/143 (42%)
Query: 309 QVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTK-----SCMLTLP- 362
++ QK + H V + P ++A+ +V + I+DT + C L
Sbjct: 113 EIIQK--INHEGEVNRARVMPQNHSIIATKTVSSEVYIFDTTKHPLEPTPDGKCSPNLKL 170
Query: 363 NAHTSDVNVISWN-RTEPLIVSGGDDGCIHVWDLRRFKKGSSVAT----FKHHTAPVTTV 417
H + ISWN R E ++S DD I +WD+ K S + HT+ V V
Sbjct: 171 TGHKKEGYGISWNPRKEGHLLSCSDDQSICMWDISAASKSDSTLDALNIYNGHTSIVEDV 230
Query: 418 EWHPTESSTFASGGADDQIALWD 440
WH + F S G D ++ +WD
Sbjct: 231 AWHYIHDTFFGSVGDDKKLMIWD 253
Score = 89 (36.4 bits), Expect = 7.1e-09, Sum P(2) = 7.1e-09
Identities = 20/56 (35%), Positives = 30/56 (53%)
Query: 703 VLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDR 758
++ATG + + +W R G L+ HT+ V +Q+SP + VLASC DR
Sbjct: 283 LVATGSTDKTVALWDMRNLGN---RLHSLISHTDEVFQVQFSPHNETVLASCGSDR 335
Score = 62 (26.9 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 24/105 (22%), Positives = 39/105 (37%)
Query: 584 IRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPG 643
I H + +V+ + T LA G +V +WDL ++ E G
Sbjct: 309 ISHTDEVFQVQFSPHNETVLASC-GSDRRVNVWDLS----------RIGEEQNNEDAADG 357
Query: 644 IPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPRE 688
P LF GH ++ W+ +P +A+ + IW E
Sbjct: 358 -PPELLFIHGGHTSKISDFSWNPNDPWSIASVAEDNILQIWQMAE 401
Score = 48 (22.0 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 649 LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIW 684
L S H E F + +S VLA+ R +++W
Sbjct: 305 LHSLISHTDEVFQVQFSPHNETVLASCGSDRRVNVW 340
Score = 45 (20.9 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 10/45 (22%), Positives = 20/45 (44%)
Query: 646 TPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAG 690
T P+ H +E + ++ ++ATG + + +W R G
Sbjct: 258 TKPIHVVEAHNSEVNCLSFNPFCEFLVATGSTDKTVALWDMRNLG 302
>WB|WBGene00003036 [details] [associations]
symbol:lin-53 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040027
"negative regulation of vulval development" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0048557
"embryonic digestive tract morphogenesis" evidence=IGI] [GO:0005634
"nucleus" evidence=IDA] [GO:0045138 "tail tip morphogenesis"
evidence=IMP] [GO:0001708 "cell fate specification" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070176 "DRM
complex" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0001708 GO:GO:0009792 GO:GO:0006915
GO:GO:0045892 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0040035 GO:GO:0045138 GO:GO:0040027
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0048557 HOGENOM:HOG000160330 EMBL:AF116530
EMBL:Z81097 EMBL:AL023833 PIR:T23391 RefSeq:NP_492552.1
UniGene:Cel.19610 ProteinModelPortal:P90916 SMR:P90916
IntAct:P90916 MINT:MINT-114323 STRING:P90916 PaxDb:P90916
EnsemblMetazoa:K07A1.12.1 EnsemblMetazoa:K07A1.12.2 GeneID:172802
KEGG:cel:CELE_K07A1.12 UCSC:K07A1.12.1 CTD:172802 WormBase:K07A1.12
InParanoid:P90916 OMA:DGFLLHV NextBio:877063 GO:GO:0070176
Uniprot:P90916
Length = 417
Score = 282 (104.3 bits), Expect = 3.7e-22, P = 3.7e-22
Identities = 65/233 (27%), Positives = 113/233 (48%)
Query: 264 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIW--TPREAGAWQVDQKPLV-GHTN 320
PL GH EG+ + W+ + G++ + + + W + A ++ K + GH +
Sbjct: 164 PLIRLKGHTKEGYGLSWNPNKEGLILSASDDQTVCHWDINANQNVAGELQAKDVFKGHES 223
Query: 321 SVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR-TEP 379
VED+ W V S D + IWD R C+ +AH+++VN +++N +E
Sbjct: 224 VVEDVAWHVLHDGVFGSVGDDKKLLIWDVRTSTPGHCI----DAHSAEVNCLAFNPYSEF 279
Query: 380 LIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALW 439
++ +G D + +WDLR + + +F+ H + V+W P + AS G D ++ +W
Sbjct: 280 ILATGSADKTVALWDLRNLRM--KLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVW 337
Query: 440 DLA-VERDSEIEQREAELKDLPSQLLFIHLGQK-EIKELHWHPQLPGTIISTA 490
DL+ + D E E D P +LLFIH G +I + W+P P + S +
Sbjct: 338 DLSKIGEDQSAEDAE----DGPPELLFIHGGHTAKISDFSWNPNEPWVVCSVS 386
Score = 192 (72.6 bits), Expect = 7.7e-12, P = 7.7e-12
Identities = 56/243 (23%), Positives = 104/243 (42%)
Query: 168 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIW--TPREAGAWQVDQKPL-GGHTN 224
PL GH EG+ + W+ + G++ + + + W + A ++ K + GH +
Sbjct: 164 PLIRLKGHTKEGYGLSWNPNKEGLILSASDDQTVCHWDINANQNVAGELQAKDVFKGHES 223
Query: 225 SAEDLQWSDLKTAL-QTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSST 283
ED+ W L + +V D +L + R PG H E + ++
Sbjct: 224 VVEDVAWHVLHDGVFGSVGDDKKLLIWDV-RTSTPG------HCIDAHSAEVNCLAFNPY 276
Query: 284 EPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLS 343
+LATG + + +W R ++ H + + +QWSP + +LAS D
Sbjct: 277 SEFILATGSADKTVALWDLRNL---RMKLHSFESHRDEIFQVQWSPHNETILASSGTDKR 333
Query: 344 IRIWD-TRVINTKSC---------MLTLPNAHTSDVNVISWNRTEPLIV-SGGDDGCIHV 392
+ +WD +++ +S +L + HT+ ++ SWN EP +V S +D + V
Sbjct: 334 LHVWDLSKIGEDQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVVCSVSEDNILQV 393
Query: 393 WDL 395
W +
Sbjct: 394 WQM 396
Score = 177 (67.4 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 61/249 (24%), Positives = 102/249 (40%)
Query: 219 LGGHTNSAEDLQWSDLKTALQTVDDPFQLAEH---NKKRGKGPGIPTPPLFSFSGHLTEG 275
L GHT L W+ K L Q H N + + +F + E
Sbjct: 168 LKGHTKEGYGLSWNPNKEGLILSASDDQTVCHWDINANQNVAGELQAKDVFKGHESVVED 227
Query: 276 FAMDWSSTEPGVLAT-GDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRV 334
A W GV + GD K+ + IW R + + H+ V L ++P + +
Sbjct: 228 VA--WHVLHDGVFGSVGDDKKLL-IWDVRTSTPGHC----IDAHSAEVNCLAFNPYSEFI 280
Query: 335 LASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWN-RTEPLIVSGGDDGCIHVW 393
LA+ S D ++ +WD R + K L +H ++ + W+ E ++ S G D +HVW
Sbjct: 281 LATGSADKTVALWDLRNLRMK---LHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVW 337
Query: 394 DLRRFKKGSSVAT---------FKH--HTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442
DL + + S F H HTA ++ W+P E S D+ + +W +A
Sbjct: 338 DLSKIGEDQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVVCSVSEDNILQVWQMA 397
Query: 443 VERDSEIEQ 451
+E+++
Sbjct: 398 DNIYNEVDE 406
Score = 137 (53.3 bits), Expect = 4.4e-09, Sum P(2) = 4.4e-09
Identities = 43/156 (27%), Positives = 69/156 (44%)
Query: 316 VGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWD----TRVI--NTKSCMLTLPNAHTSDV 369
+ H V ++ P + ++A+ S + I+D + V NT + ++ L HT +
Sbjct: 117 INHEGEVNRARYMPQKSNIIATKSPHADVYIFDYLKHSAVPRDNTFNPLIRL-KGHTKEG 175
Query: 370 NVISWN-RTEPLIVSGGDDGCIHVWDLRRFKK--GSSVA--TFKHHTAPVTTVEWHPTES 424
+SWN E LI+S DD + WD+ + G A FK H + V V WH
Sbjct: 176 YGLSWNPNKEGLILSASDDQTVCHWDINANQNVAGELQAKDVFKGHESVVEDVAWHVLHD 235
Query: 425 STFASGGADDQIALWDLAVERDSE-IEQREAELKDL 459
F S G D ++ +WD+ I+ AE+ L
Sbjct: 236 GVFGSVGDDKKLLIWDVRTSTPGHCIDAHSAEVNCL 271
Score = 77 (32.2 bits), Expect = 4.4e-09, Sum P(2) = 4.4e-09
Identities = 21/78 (26%), Positives = 34/78 (43%)
Query: 703 VLATGDCKRNIHIWTPREAGAWQV-----DQKPLV-----GHTNSVEDLQWSPGEKRVLA 752
+LA+ + +H+W + G Q D P + GHT + D W+P E V+
Sbjct: 324 ILASSGTDKRLHVWDLSKIGEDQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVVC 383
Query: 753 SCSVDRSNRIGARRDMLY 770
S S D ++ D +Y
Sbjct: 384 SVSEDNILQVWQMADNIY 401
Score = 70 (29.7 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 649 LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAG 690
L SF H E F + WS +LA+ + +H+W + G
Sbjct: 302 LHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWDLSKIG 343
Score = 60 (26.2 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 27/102 (26%), Positives = 43/102 (42%)
Query: 583 FIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGP 642
F HR I +V+ + T LA G ++ +WDL + +D Q AE + + G
Sbjct: 305 FESHRDEIFQVQWSPHNETILASS-GTDKRLHVWDLS---KIGED--QSAE-DAEDG--- 354
Query: 643 GIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIW 684
P LF GH + W+ EP V+ + + +W
Sbjct: 355 --PPELLFIHGGHTAKISDFSWNPNEPWVVCSVSEDNILQVW 394
>UNIPROTKB|P90916 [details] [associations]
symbol:lin-53 "Probable histone-binding protein lin-53"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0042826 "histone deacetylase binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0009790
"embryo development" evidence=IMP] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0070176
"DRM complex" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=NAS] [GO:0017053
"transcriptional repressor complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0001708 GO:GO:0009792 GO:GO:0006915 GO:GO:0045892
GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0040035 GO:GO:0045138
GO:GO:0040027 GeneTree:ENSGT00570000079069 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0048557 HOGENOM:HOG000160330
EMBL:AF116530 EMBL:Z81097 EMBL:AL023833 PIR:T23391
RefSeq:NP_492552.1 UniGene:Cel.19610 ProteinModelPortal:P90916
SMR:P90916 IntAct:P90916 MINT:MINT-114323 STRING:P90916
PaxDb:P90916 EnsemblMetazoa:K07A1.12.1 EnsemblMetazoa:K07A1.12.2
GeneID:172802 KEGG:cel:CELE_K07A1.12 UCSC:K07A1.12.1 CTD:172802
WormBase:K07A1.12 InParanoid:P90916 OMA:DGFLLHV NextBio:877063
GO:GO:0070176 Uniprot:P90916
Length = 417
Score = 282 (104.3 bits), Expect = 3.7e-22, P = 3.7e-22
Identities = 65/233 (27%), Positives = 113/233 (48%)
Query: 264 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIW--TPREAGAWQVDQKPLV-GHTN 320
PL GH EG+ + W+ + G++ + + + W + A ++ K + GH +
Sbjct: 164 PLIRLKGHTKEGYGLSWNPNKEGLILSASDDQTVCHWDINANQNVAGELQAKDVFKGHES 223
Query: 321 SVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR-TEP 379
VED+ W V S D + IWD R C+ +AH+++VN +++N +E
Sbjct: 224 VVEDVAWHVLHDGVFGSVGDDKKLLIWDVRTSTPGHCI----DAHSAEVNCLAFNPYSEF 279
Query: 380 LIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALW 439
++ +G D + +WDLR + + +F+ H + V+W P + AS G D ++ +W
Sbjct: 280 ILATGSADKTVALWDLRNLRM--KLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVW 337
Query: 440 DLA-VERDSEIEQREAELKDLPSQLLFIHLGQK-EIKELHWHPQLPGTIISTA 490
DL+ + D E E D P +LLFIH G +I + W+P P + S +
Sbjct: 338 DLSKIGEDQSAEDAE----DGPPELLFIHGGHTAKISDFSWNPNEPWVVCSVS 386
Score = 192 (72.6 bits), Expect = 7.7e-12, P = 7.7e-12
Identities = 56/243 (23%), Positives = 104/243 (42%)
Query: 168 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIW--TPREAGAWQVDQKPL-GGHTN 224
PL GH EG+ + W+ + G++ + + + W + A ++ K + GH +
Sbjct: 164 PLIRLKGHTKEGYGLSWNPNKEGLILSASDDQTVCHWDINANQNVAGELQAKDVFKGHES 223
Query: 225 SAEDLQWSDLKTAL-QTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSST 283
ED+ W L + +V D +L + R PG H E + ++
Sbjct: 224 VVEDVAWHVLHDGVFGSVGDDKKLLIWDV-RTSTPG------HCIDAHSAEVNCLAFNPY 276
Query: 284 EPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLS 343
+LATG + + +W R ++ H + + +QWSP + +LAS D
Sbjct: 277 SEFILATGSADKTVALWDLRNL---RMKLHSFESHRDEIFQVQWSPHNETILASSGTDKR 333
Query: 344 IRIWD-TRVINTKSC---------MLTLPNAHTSDVNVISWNRTEPLIV-SGGDDGCIHV 392
+ +WD +++ +S +L + HT+ ++ SWN EP +V S +D + V
Sbjct: 334 LHVWDLSKIGEDQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVVCSVSEDNILQV 393
Query: 393 WDL 395
W +
Sbjct: 394 WQM 396
Score = 177 (67.4 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 61/249 (24%), Positives = 102/249 (40%)
Query: 219 LGGHTNSAEDLQWSDLKTALQTVDDPFQLAEH---NKKRGKGPGIPTPPLFSFSGHLTEG 275
L GHT L W+ K L Q H N + + +F + E
Sbjct: 168 LKGHTKEGYGLSWNPNKEGLILSASDDQTVCHWDINANQNVAGELQAKDVFKGHESVVED 227
Query: 276 FAMDWSSTEPGVLAT-GDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRV 334
A W GV + GD K+ + IW R + + H+ V L ++P + +
Sbjct: 228 VA--WHVLHDGVFGSVGDDKKLL-IWDVRTSTPGHC----IDAHSAEVNCLAFNPYSEFI 280
Query: 335 LASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWN-RTEPLIVSGGDDGCIHVW 393
LA+ S D ++ +WD R + K L +H ++ + W+ E ++ S G D +HVW
Sbjct: 281 LATGSADKTVALWDLRNLRMK---LHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVW 337
Query: 394 DLRRFKKGSSVAT---------FKH--HTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442
DL + + S F H HTA ++ W+P E S D+ + +W +A
Sbjct: 338 DLSKIGEDQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVVCSVSEDNILQVWQMA 397
Query: 443 VERDSEIEQ 451
+E+++
Sbjct: 398 DNIYNEVDE 406
Score = 137 (53.3 bits), Expect = 4.4e-09, Sum P(2) = 4.4e-09
Identities = 43/156 (27%), Positives = 69/156 (44%)
Query: 316 VGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWD----TRVI--NTKSCMLTLPNAHTSDV 369
+ H V ++ P + ++A+ S + I+D + V NT + ++ L HT +
Sbjct: 117 INHEGEVNRARYMPQKSNIIATKSPHADVYIFDYLKHSAVPRDNTFNPLIRL-KGHTKEG 175
Query: 370 NVISWN-RTEPLIVSGGDDGCIHVWDLRRFKK--GSSVA--TFKHHTAPVTTVEWHPTES 424
+SWN E LI+S DD + WD+ + G A FK H + V V WH
Sbjct: 176 YGLSWNPNKEGLILSASDDQTVCHWDINANQNVAGELQAKDVFKGHESVVEDVAWHVLHD 235
Query: 425 STFASGGADDQIALWDLAVERDSE-IEQREAELKDL 459
F S G D ++ +WD+ I+ AE+ L
Sbjct: 236 GVFGSVGDDKKLLIWDVRTSTPGHCIDAHSAEVNCL 271
Score = 77 (32.2 bits), Expect = 4.4e-09, Sum P(2) = 4.4e-09
Identities = 21/78 (26%), Positives = 34/78 (43%)
Query: 703 VLATGDCKRNIHIWTPREAGAWQV-----DQKPLV-----GHTNSVEDLQWSPGEKRVLA 752
+LA+ + +H+W + G Q D P + GHT + D W+P E V+
Sbjct: 324 ILASSGTDKRLHVWDLSKIGEDQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVVC 383
Query: 753 SCSVDRSNRIGARRDMLY 770
S S D ++ D +Y
Sbjct: 384 SVSEDNILQVWQMADNIY 401
Score = 70 (29.7 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 649 LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAG 690
L SF H E F + WS +LA+ + +H+W + G
Sbjct: 302 LHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWDLSKIG 343
Score = 60 (26.2 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 27/102 (26%), Positives = 43/102 (42%)
Query: 583 FIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGP 642
F HR I +V+ + T LA G ++ +WDL + +D Q AE + + G
Sbjct: 305 FESHRDEIFQVQWSPHNETILASS-GTDKRLHVWDLS---KIGED--QSAE-DAEDG--- 354
Query: 643 GIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIW 684
P LF GH + W+ EP V+ + + +W
Sbjct: 355 --PPELLFIHGGHTAKISDFSWNPNEPWVVCSVSEDNILQVW 394
>UNIPROTKB|Q61Y48 [details] [associations]
symbol:lin-53 "Probable histone-binding protein lin-53"
species:6238 "Caenorhabditis briggsae" [GO:0005634 "nucleus"
evidence=ISS] [GO:0009790 "embryo development" evidence=ISS]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0040035 "hermaphrodite genitalia development"
evidence=ISS] [GO:0042826 "histone deacetylase binding"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0017053 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0040035 GO:GO:0042826
InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330 EMBL:HE600990
ProteinModelPortal:Q61Y48 SMR:Q61Y48 STRING:Q61Y48 PRIDE:Q61Y48
EnsemblMetazoa:CBG03710 WormBase:CBG03710 Uniprot:Q61Y48
Length = 416
Score = 274 (101.5 bits), Expect = 3.5e-21, P = 3.5e-21
Identities = 68/244 (27%), Positives = 120/244 (49%)
Query: 256 KGPGIPTP----PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPR-EAGA-WQ 309
K P +P PL GH EG+ + W+ + G++ + + + W AGA +
Sbjct: 152 KYPSVPKDNTFNPLLKLKGHTKEGYGLSWNPNKEGLILSASDDQTVCHWDINGNAGANGE 211
Query: 310 VDQKPLV-GHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSD 368
+ + + GH + VED+ W V S D + IWD R N + +AH+++
Sbjct: 212 LKAREIFKGHESVVEDVAWHVLHDGVFGSVGDDKKLLIWDLRT-NVPGHAI---DAHSAE 267
Query: 369 VNVISWNR-TEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTF 427
VN +++N +E ++ +G D + +WDLR + + +F+ H + V+W P +
Sbjct: 268 VNCLAFNPYSEFILATGSADKTVALWDLRNLRL--KLHSFESHRDEIFQVQWSPHNETIL 325
Query: 428 ASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQK-EIKELHWHPQLPGTI 486
AS G D ++ +WDL+ + E +Q + +D P +LLFIH G +I + W+P P +
Sbjct: 326 ASSGTDKRLHVWDLS--KIGE-DQTAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVV 382
Query: 487 ISTA 490
S +
Sbjct: 383 CSVS 386
Score = 194 (73.4 bits), Expect = 4.6e-12, P = 4.6e-12
Identities = 60/255 (23%), Positives = 106/255 (41%)
Query: 160 KGPGIPTP----PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPR-EAGA-WQ 213
K P +P PL GH EG+ + W+ + G++ + + + W AGA +
Sbjct: 152 KYPSVPKDNTFNPLLKLKGHTKEGYGLSWNPNKEGLILSASDDQTVCHWDINGNAGANGE 211
Query: 214 VDQKPL-GGHTNSAEDLQWSDLKTAL-QTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGH 271
+ + + GH + ED+ W L + +V D +L + R PG + H
Sbjct: 212 LKAREIFKGHESVVEDVAWHVLHDGVFGSVGDDKKLLIWDL-RTNVPG------HAIDAH 264
Query: 272 LTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGE 331
E + ++ +LATG + + +W R ++ H + + +QWSP
Sbjct: 265 SAEVNCLAFNPYSEFILATGSADKTVALWDLRNL---RLKLHSFESHRDEIFQVQWSPHN 321
Query: 332 KRVLASCSVDLSIRIWDTRVINTKSC----------MLTLPNAHTSDVNVISWNRTEPLI 381
+ +LAS D + +WD I +L + HT+ ++ SWN EP +
Sbjct: 322 ETILASSGTDKRLHVWDLSKIGEDQTAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWV 381
Query: 382 V-SGGDDGCIHVWDL 395
V S +D + VW +
Sbjct: 382 VCSVSEDNILQVWQM 396
Score = 183 (69.5 bits), Expect = 7.6e-11, P = 7.6e-11
Identities = 69/284 (24%), Positives = 116/284 (40%)
Query: 188 EPGVLATGDCKRNIHIWTPREAGAWQVDQ--KPL---GGHTNSAEDLQWSDLKTALQTVD 242
+P ++AT +++I+ + + D PL GHT L W+ K L
Sbjct: 132 KPTIIATKSPSADVYIFDYTKYPSVPKDNTFNPLLKLKGHTKEGYGLSWNPNKEGLILSA 191
Query: 243 DPFQLAEH---NKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLAT-GDCKRNIH 298
Q H N G + +F + E A W GV + GD K+ +
Sbjct: 192 SDDQTVCHWDINGNAGANGELKAREIFKGHESVVEDVA--WHVLHDGVFGSVGDDKKLL- 248
Query: 299 IWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCM 358
IW R V + H+ V L ++P + +LA+ S D ++ +WD R + K
Sbjct: 249 IWDLRT----NVPGHAIDAHSAEVNCLAFNPYSEFILATGSADKTVALWDLRNLRLK--- 301
Query: 359 LTLPNAHTSDVNVISWN-RTEPLIVSGGDDGCIHVWDLRRF---------KKGSSVATFK 408
L +H ++ + W+ E ++ S G D +HVWDL + + G F
Sbjct: 302 LHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWDLSKIGEDQTAEDAEDGPPELLFI 361
Query: 409 H--HTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIE 450
H HTA ++ W+P E S D+ + +W +A +++E
Sbjct: 362 HGGHTAKISDFSWNPNEPWVVCSVSEDNILQVWQMADNIYNDVE 405
Score = 138 (53.6 bits), Expect = 1.8e-09, Sum P(3) = 1.8e-09
Identities = 45/156 (28%), Positives = 68/156 (43%)
Query: 316 VGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWD-TRVI-----NTKSCMLTLPNAHTSDV 369
+ H V ++ P + ++A+ S + I+D T+ NT + +L L HT +
Sbjct: 117 INHEGEVNRARYMPQKPTIIATKSPSADVYIFDYTKYPSVPKDNTFNPLLKL-KGHTKEG 175
Query: 370 NVISWN-RTEPLIVSGGDDGCIHVWDLR--RFKKGSSVAT--FKHHTAPVTTVEWHPTES 424
+SWN E LI+S DD + WD+ G A FK H + V V WH
Sbjct: 176 YGLSWNPNKEGLILSASDDQTVCHWDINGNAGANGELKAREIFKGHESVVEDVAWHVLHD 235
Query: 425 STFASGGADDQIALWDLAVERDSE-IEQREAELKDL 459
F S G D ++ +WDL I+ AE+ L
Sbjct: 236 GVFGSVGDDKKLLIWDLRTNVPGHAIDAHSAEVNCL 271
Score = 79 (32.9 bits), Expect = 1.8e-09, Sum P(3) = 1.8e-09
Identities = 21/78 (26%), Positives = 34/78 (43%)
Query: 703 VLATGDCKRNIHIWTPREAGAWQV-----DQKPLV-----GHTNSVEDLQWSPGEKRVLA 752
+LA+ + +H+W + G Q D P + GHT + D W+P E V+
Sbjct: 324 ILASSGTDKRLHVWDLSKIGEDQTAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVVC 383
Query: 753 SCSVDRSNRIGARRDMLY 770
S S D ++ D +Y
Sbjct: 384 SVSEDNILQVWQMADNIY 401
Score = 70 (29.7 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 649 LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAG 690
L SF H E F + WS +LA+ + +H+W + G
Sbjct: 302 LHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWDLSKIG 343
Score = 61 (26.5 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 27/102 (26%), Positives = 43/102 (42%)
Query: 583 FIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGP 642
F HR I +V+ + T LA G ++ +WDL + +D Q AE + + G
Sbjct: 305 FESHRDEIFQVQWSPHNETILASS-GTDKRLHVWDLS---KIGED--QTAE-DAEDG--- 354
Query: 643 GIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIW 684
P LF GH + W+ EP V+ + + +W
Sbjct: 355 --PPELLFIHGGHTAKISDFSWNPNEPWVVCSVSEDNILQVW 394
Score = 41 (19.5 bits), Expect = 1.8e-09, Sum P(3) = 1.8e-09
Identities = 9/40 (22%), Positives = 17/40 (42%)
Query: 648 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPR 687
P + H E + ++ +LATG + + +W R
Sbjct: 257 PGHAIDAHSAEVNCLAFNPYSEFILATGSADKTVALWDLR 296
>TAIR|locus:2131551 [details] [associations]
symbol:MSI3 "MULTICOPY SUPPRESSOR OF IRA1 3" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0005515 "protein binding" evidence=IPI] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=IPI] [GO:0000278 "mitotic cell
cycle" evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0006406 "mRNA export from nucleus" evidence=RCA] [GO:0006606
"protein import into nucleus" evidence=RCA] [GO:0009560 "embryo sac
egg cell differentiation" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010074 "maintenance of meristem
identity" evidence=RCA] [GO:0010162 "seed dormancy process"
evidence=RCA] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0016567 "protein
ubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0050826 "response to freezing" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 EMBL:AL022023 EMBL:AL161586 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000160330
OMA:VLYDLVI ProtClustDB:CLSN2683757 EMBL:AF016848 IPI:IPI00525720
PIR:T05775 RefSeq:NP_195231.1 UniGene:At.2099
ProteinModelPortal:O22469 SMR:O22469 IntAct:O22469 STRING:O22469
PaxDb:O22469 PRIDE:O22469 EnsemblPlants:AT4G35050.1 GeneID:829657
KEGG:ath:AT4G35050 GeneFarm:2817 TAIR:At4g35050 InParanoid:O22469
PhylomeDB:O22469 Genevestigator:O22469 GermOnline:AT4G35050
Uniprot:O22469
Length = 424
Score = 269 (99.8 bits), Expect = 1.6e-20, P = 1.6e-20
Identities = 84/327 (25%), Positives = 139/327 (42%)
Query: 174 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKP---LGGHTNSAEDLQ 230
G T G A D+ V+ T D + + +E +V+ K + G N A +
Sbjct: 69 GTHTSGGAQDFLMVADVVIPTPDAEPGLG-GRDQEPIVPKVEIKQKIRVDGEVNRARCMP 127
Query: 231 WSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLAT 290
+T L ++ + GK P GH EG+ + WSS + G L +
Sbjct: 128 QKPTLVGAKTSGSEVFLFDYARLSGKPQTSECDPDLRLMGHEQEGYGLAWSSFKEGYLLS 187
Query: 291 GDCKRNIHIWTPREAGAWQVDQ--KPL---VGHTNSVEDLQWSPGEKRVLASCSVDLSIR 345
G + I +W + A D+ P+ GH + +ED+ W + + S D +
Sbjct: 188 GSQDQRICLW---DVSATATDKVLNPMHVYEGHQSIIEDVAWHMKNENIFGSAGDDCQLV 244
Query: 346 IWDTRVINTKSCMLTLPNAHTSDVNVISWNR-TEPLIVSGGDDGCIHVWDLRRFKKGSSV 404
IWD R + M H ++N +S+N E ++ + D + ++DLR+ + +
Sbjct: 245 IWDLRT----NQMQHQVKVHEREINYLSFNPFNEWVLATASSDSTVALFDLRKLT--APL 298
Query: 405 ATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLL 464
H V VEW P + AS G D ++ +WD+ D ++E E + +D P +LL
Sbjct: 299 HVLSKHEGEVFQVEWDPNHETVLASSGEDRRLMVWDINRVGDEQLEI-ELDAEDGPPELL 357
Query: 465 FIHLGQK-EIKELHWHPQLPGTIISTA 490
F H G K +I + W+ P I S A
Sbjct: 358 FSHGGHKAKISDFAWNKDEPWVISSVA 384
Score = 152 (58.6 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 56/229 (24%), Positives = 95/229 (41%)
Query: 315 LVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCM--LTLPNAHTSDVNVI 372
L+GH L WS ++ L S S D I +WD T + + + H S + +
Sbjct: 165 LMGHEQEGYGLAWSSFKEGYLLSGSQDQRICLWDVSATATDKVLNPMHVYEGHQSIIEDV 224
Query: 373 SWN-RTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGG 431
+W+ + E + S GDD + +WDLR + V K H + + ++P A+
Sbjct: 225 AWHMKNENIFGSAGDDCQLVIWDLRTNQMQHQV---KVHEREINYLSFNPFNEWVLATAS 281
Query: 432 ADDQIALWDLA--VERDSEIEQREAELKDL---PSQLLFIHLGQKEIKELHWHPQLPGTI 486
+D +AL+DL + + E E+ + P+ + ++ + + W I
Sbjct: 282 SDSTVALFDLRKLTAPLHVLSKHEGEVFQVEWDPNHETVLASSGEDRRLMVWD------I 335
Query: 487 ISTANSGFNIFRTISDLPSQLLFIHLGQK-EIKELHWHPQLPGTIISTA 534
+ I D P +LLF H G K +I + W+ P I S A
Sbjct: 336 NRVGDEQLEIELDAEDGPPELLFSHGGHKAKISDFAWNKDEPWVISSVA 384
Score = 147 (56.8 bits), Expect = 7.3e-07, P = 7.3e-07
Identities = 58/264 (21%), Positives = 102/264 (38%)
Query: 151 LAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAG 210
L ++ + GK P GH EG+ + WSS + G L +G + I +W +
Sbjct: 144 LFDYARLSGKPQTSECDPDLRLMGHEQEGYGLAWSSFKEGYLLSGSQDQRICLW---DVS 200
Query: 211 AWQVDQ--KPLG---GHTNSAEDLQWS-DLKTALQTVDDPFQLAEHNKKRGKGPGIPTPP 264
A D+ P+ GH + ED+ W + + D QL + + +
Sbjct: 201 ATATDKVLNPMHVYEGHQSIIEDVAWHMKNENIFGSAGDDCQLVIWDLRTNQMQ------ 254
Query: 265 LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVED 324
H E + ++ VLAT + ++ R+ A L H V
Sbjct: 255 -HQVKVHEREINYLSFNPFNEWVLATASSDSTVALFDLRKLTA---PLHVLSKHEGEVFQ 310
Query: 325 LQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTL-----P-------NAHTSDVNVI 372
++W P + VLAS D + +WD + + + L P H + ++
Sbjct: 311 VEWDPNHETVLASSGEDRRLMVWDINRVGDEQLEIELDAEDGPPELLFSHGGHKAKISDF 370
Query: 373 SWNRTEPLIVSG-GDDGCIHVWDL 395
+WN+ EP ++S +D + VW +
Sbjct: 371 AWNKDEPWVISSVAEDNSLQVWQM 394
Score = 131 (51.2 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 48/211 (22%), Positives = 88/211 (41%)
Query: 264 PLFSFSGHLTEGFAMDWSSTEPGVLATG--DCKRNIHIWTPREAGAWQVDQKPLVGHTNS 321
P+ + GH + + W + + DC+ + IW R Q+ + V H
Sbjct: 210 PMHVYEGHQSIIEDVAWHMKNENIFGSAGDDCQ--LVIWDLRTN---QMQHQVKV-HERE 263
Query: 322 VEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRT-EPL 380
+ L ++P + VLA+ S D ++ ++D R + +L+ H +V + W+ E +
Sbjct: 264 INYLSFNPFNEWVLATASSDSTVALFDLRKLTAPLHVLS---KHEGEVFQVEWDPNHETV 320
Query: 381 IVSGGDDGCIHVWDLRRF-----------KKGSSVATFKH--HTAPVTTVEWHPTESSTF 427
+ S G+D + VWD+ R + G F H H A ++ W+ E
Sbjct: 321 LASSGEDRRLMVWDINRVGDEQLEIELDAEDGPPELLFSHGGHKAKISDFAWNKDEPWVI 380
Query: 428 ASGGADDQIALWDLA---VERDSEIEQREAE 455
+S D+ + +W +A D E E + E
Sbjct: 381 SSVAEDNSLQVWQMAESIYREDDEDEDDDDE 411
>TAIR|locus:2059856 [details] [associations]
symbol:MSI2 "AT2G16780" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0000911
"cytokinesis by cell plate formation" evidence=RCA] [GO:0006260
"DNA replication" evidence=RCA] [GO:0006306 "DNA methylation"
evidence=RCA] [GO:0007067 "mitosis" evidence=RCA] [GO:0007129
"synapsis" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0008283 "cell proliferation"
evidence=RCA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] [GO:0010564 "regulation of cell cycle process"
evidence=RCA] [GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 EMBL:AC005825 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000160330
ProtClustDB:CLSN2683757 EMBL:AF016847 EMBL:AY056814 IPI:IPI00526379
PIR:B84544 RefSeq:NP_179269.1 UniGene:At.25135
ProteinModelPortal:O22468 SMR:O22468 STRING:O22468 PaxDb:O22468
PRIDE:O22468 EnsemblPlants:AT2G16780.1 GeneID:816179
KEGG:ath:AT2G16780 GeneFarm:2815 TAIR:At2g16780 InParanoid:O22468
OMA:EVNYLSF PhylomeDB:O22468 Genevestigator:O22468
GermOnline:AT2G16780 Uniprot:O22468
Length = 415
Score = 259 (96.2 bits), Expect = 2.0e-19, P = 2.0e-19
Identities = 78/276 (28%), Positives = 117/276 (42%)
Query: 221 GHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDW 280
G N A + +T L ++ K K P GH EG+ + W
Sbjct: 117 GEVNRARCMPQKPTLVGAKTSGCEVFLFDYAKHAAKSQTSECDPDLRLVGHDKEGYGLSW 176
Query: 281 SSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLV--GHTNSVEDLQWSPGEKRVLASC 338
S + G L +G + I +W +V V GH +++ D+ W + + S
Sbjct: 177 SPFKEGYLLSGSQDQKICLWDVSATPQDKVLNAMFVYEGHESAIADVSWHMKNENLFGSA 236
Query: 339 SVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR-TEPLIVSGGDDGCIHVWDLRR 397
D + IWDTR + M H +VN +S+N E ++ + D + ++DLR
Sbjct: 237 GEDGRLVIWDTRT----NQMQHQVKVHEREVNYLSFNPFNEWVLATASSDSTVALFDLR- 291
Query: 398 FKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAEL- 456
K + + H V VEW P + AS G D ++ +WDL R E EQ E EL
Sbjct: 292 -KLNAPLHVMSSHEGEVFQVEWDPNHETVLASSGEDRRLMVWDL--NRVGE-EQLEIELD 347
Query: 457 -KDLPSQLLFIHLGQK-EIKELHWHPQLPGTIISTA 490
+D P +LLF H G K +I + W+ P I S A
Sbjct: 348 AEDGPPELLFSHGGHKAKISDFAWNKNEPWVIASVA 383
Score = 153 (58.9 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 49/200 (24%), Positives = 86/200 (43%)
Query: 265 LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVED 324
+F + GH + + W + + + IW R Q+ + V H V
Sbjct: 210 MFVYEGHESAIADVSWHMKNENLFGSAGEDGRLVIWDTRTN---QMQHQVKV-HEREVNY 265
Query: 325 LQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRT-EPLIVS 383
L ++P + VLA+ S D ++ ++D R +N L + ++H +V + W+ E ++ S
Sbjct: 266 LSFNPFNEWVLATASSDSTVALFDLRKLNAP---LHVMSSHEGEVFQVEWDPNHETVLAS 322
Query: 384 GGDDGCIHVWDLRRF-----------KKGSSVATFKH--HTAPVTTVEWHPTESSTFASG 430
G+D + VWDL R + G F H H A ++ W+ E AS
Sbjct: 323 SGEDRRLMVWDLNRVGEEQLEIELDAEDGPPELLFSHGGHKAKISDFAWNKNEPWVIASV 382
Query: 431 GADDQIALWDLA--VERDSE 448
D+ + +W +A + RD E
Sbjct: 383 AEDNSLQVWQMAESIYRDEE 402
Score = 99 (39.9 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 27/96 (28%), Positives = 41/96 (42%)
Query: 264 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQV-------DQKPLV 316
PL S H E F ++W VLA+ R + +W G Q+ D P +
Sbjct: 296 PLHVMSSHEGEVFQVEWDPNHETVLASSGEDRRLMVWDLNRVGEEQLEIELDAEDGPPEL 355
Query: 317 -----GHTNSVEDLQWSPGEKRVLASCSVDLSIRIW 347
GH + D W+ E V+AS + D S+++W
Sbjct: 356 LFSHGGHKAKISDFAWNKNEPWVIASVAEDNSLQVW 391
Score = 74 (31.1 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 23/87 (26%), Positives = 37/87 (42%)
Query: 151 LAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIW----TP 206
L ++ K K P GH EG+ + WS + G L +G + I +W TP
Sbjct: 143 LFDYAKHAAKSQTSECDPDLRLVGHDKEGYGLSWSPFKEGYLLSGSQDQKICLWDVSATP 202
Query: 207 REA--GAWQVDQKPLGGHTNSAEDLQW 231
++ A V + GH ++ D+ W
Sbjct: 203 QDKVLNAMFVYE----GHESAIADVSW 225
>UNIPROTKB|B0XAF3 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7176 "Culex quinquefasciatus"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT OrthoDB:EOG45DV4X
EMBL:DS232580 RefSeq:XP_001866625.1 UniGene:Cpi.8879
ProteinModelPortal:B0XAF3 STRING:B0XAF3
EnsemblMetazoa:CPIJ016096-RA GeneID:6049938
KEGG:cqu:CpipJ_CPIJ016096 VectorBase:CPIJ016096 PhylomeDB:B0XAF3
Uniprot:B0XAF3
Length = 338
Score = 236 (88.1 bits), Expect = 5.2e-18, Sum P(2) = 5.2e-18
Identities = 60/177 (33%), Positives = 86/177 (48%)
Query: 269 SGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLV-GHTNSVEDLQW 327
SGH + W +P VLAT + I IW G W V + L GHT ++ D+ W
Sbjct: 11 SGHRGRVWGAGWHPRDP-VLATCGEDKTIRIWADDGTGRW-VPKTVLSDGHTRTIRDVAW 68
Query: 328 SPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDD 387
SP R LAS S D ++ IWD R C TL H ++V +SW+++ L+ + D
Sbjct: 69 SPCG-RFLASASFDATVAIWDRRS-GEFECNATL-EGHENEVKSVSWSKSGALLATCSRD 125
Query: 388 GCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALW--DLA 442
+ +W++ + + A H+ V VEWHP E AS D+ I L+ DLA
Sbjct: 126 KSVWIWEVAQEDEYECAAVLNTHSQDVKKVEWHPNED-VLASASYDNTIQLYREDLA 181
Score = 177 (67.4 bits), Expect = 5.4e-10, Sum P(2) = 5.4e-10
Identities = 64/291 (21%), Positives = 116/291 (39%)
Query: 257 GPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLV 316
G G P GH + WS LA+ + IW R +G ++ + L
Sbjct: 45 GTGRWVPKTVLSDGHTRTIRDVAWSPCGR-FLASASFDATVAIWD-RRSGEFECNAT-LE 101
Query: 317 GHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR 376
GH N V+ + WS +LA+CS D S+ IW+ + C L N H+ DV + W+
Sbjct: 102 GHENEVKSVSWSKSGA-LLATCSRDKSVWIWEVAQEDEYECAAVL-NTHSQDVKKVEWHP 159
Query: 377 TEPLIVSGGDDGCIHVW--DLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADD 434
E ++ S D I ++ DL SS T H + V ++ + + S AS D
Sbjct: 160 NEDVLASASYDNTIQLYREDLAD-SDWSSFDTLASHDSTVWSIAFDAS-GSRLASCSDDQ 217
Query: 435 QIALW-DLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSG 493
+ +W + + + + + + + ++ W + G I +
Sbjct: 218 TVRIWQEYKPGNEFGVACPDGKTPVWKCVCTLSGFHSRAVYDISWCKKT-GLIATACGDD 276
Query: 494 F-NIFRTISDLPSQ------LLFIHLGQKEIKELHWHPQLPGTIISTANSG 537
IFR ++ P+ + H ++ + W P + G +++T++ G
Sbjct: 277 MVRIFREVAGSPANEPTFEMVASKHAHSQDANTVEWSPTVAGLLVTTSDDG 327
Score = 136 (52.9 bits), Expect = 7.5e-06, P = 7.5e-06
Identities = 73/306 (23%), Positives = 114/306 (37%)
Query: 161 GPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLG 220
G G P GH + WS LA+ + IW R +G ++ + L
Sbjct: 45 GTGRWVPKTVLSDGHTRTIRDVAWSPCGR-FLASASFDATVAIWD-RRSGEFECNAT-LE 101
Query: 221 GHTNSAEDLQWSDLKTALQTVD-DP----FQLAEHNKKRGKGPGIPTPPLFSFSGHLTEG 275
GH N + + WS L T D +++A+ ++ + H +
Sbjct: 102 GHENEVKSVSWSKSGALLATCSRDKSVWIWEVAQEDEYECAAV---------LNTHSQDV 152
Query: 276 FAMDWSSTEPGVLATGDCKRNIHIWTPREAGA-WQVDQKPLVGHTNSVEDLQWSPGEKRV 334
++W E VLA+ I ++ A + W L H ++V + + R
Sbjct: 153 KKVEWHPNED-VLASASYDNTIQLYREDLADSDWS-SFDTLASHDSTVWSIAFDASGSR- 209
Query: 335 LASCSVDLSIRIWDTRVINTK-------------SCMLTLPNAHTSDVNVISWNRTEPLI 381
LASCS D ++RIW + C+ TL H+ V ISW + LI
Sbjct: 210 LASCSDDQTVRIWQEYKPGNEFGVACPDGKTPVWKCVCTLSGFHSRAVYDISWCKKTGLI 269
Query: 382 VSGGDDGCIHVWDLRRFKKGSSV--ATF-----KH-HTAPVTTVEWHPTESSTFASGGAD 433
+ D + ++ R GS TF KH H+ TVEW PT + + D
Sbjct: 270 ATACGDDMVRIF---REVAGSPANEPTFEMVASKHAHSQDANTVEWSPTVAGLLVTTSDD 326
Query: 434 DQIALW 439
+ LW
Sbjct: 327 GDVKLW 332
Score = 41 (19.5 bits), Expect = 5.2e-18, Sum P(2) = 5.2e-18
Identities = 20/67 (29%), Positives = 26/67 (38%)
Query: 692 WSVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVG-HTNSVEDLQWSPGEKRV 750
W Y N FGV A D K TP W+ L G H+ +V D+ W +
Sbjct: 222 WQEYKPGNEFGV-ACPDGK------TP----VWKC-VCTLSGFHSRAVYDISWCKKTGLI 269
Query: 751 LASCSVD 757
+C D
Sbjct: 270 ATACGDD 276
Score = 38 (18.4 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 7/24 (29%), Positives = 12/24 (50%)
Query: 734 HTNSVEDLQWSPGEKRVLASCSVD 757
H+ ++WSP +L + S D
Sbjct: 303 HSQDANTVEWSPTVAGLLVTTSDD 326
>UNIPROTKB|H0YCT5 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016581 EMBL:AC114489 HGNC:HGNC:9887
ChiTaRS:RBBP4 PRIDE:H0YCT5 Ensembl:ENST00000460669 Bgee:H0YCT5
Uniprot:H0YCT5
Length = 180
Score = 223 (83.6 bits), Expect = 2.4e-17, P = 2.4e-17
Identities = 52/152 (34%), Positives = 84/152 (55%)
Query: 341 DLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR-TEPLIVSGGDDGCIHVWDLRRFK 399
D + IWDTR NT ++ +AHT++VN +S+N +E ++ +G D + +WDLR K
Sbjct: 4 DQKLMIWDTRSNNTSKPSHSV-DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLK 62
Query: 400 KGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDL 459
+ +F+ H + V+W P + AS G D ++ +WDL+ + E EQ + +D
Sbjct: 63 L--KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLS--KIGE-EQSPEDAEDG 117
Query: 460 PSQLLFIHLGQK-EIKELHWHPQLPGTIISTA 490
P +LLFIH G +I + W+P P I S +
Sbjct: 118 PPELLFIHGGHTAKISDFSWNPNEPWVICSVS 149
Score = 147 (56.8 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 40/160 (25%), Positives = 71/160 (44%)
Query: 295 RNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINT 354
+ + IW R + + HT V L ++P + +LA+ S D ++ +WD R +
Sbjct: 5 QKLMIWDTRSNNTSKPSHS-VDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKL 63
Query: 355 KSCMLTLPNAHTSDVNVISWN-RTEPLIVSGGDDGCIHVWDLRRF---------KKGSSV 404
K L +H ++ + W+ E ++ S G D ++VWDL + + G
Sbjct: 64 K---LHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPE 120
Query: 405 ATFKH--HTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442
F H HTA ++ W+P E S D+ + +W +A
Sbjct: 121 LLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMA 160
Score = 144 (55.7 bits), Expect = 6.8e-09, P = 6.8e-09
Identities = 34/143 (23%), Positives = 61/143 (42%)
Query: 264 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVE 323
P S H E + ++ +LATG + + +W R ++ H + +
Sbjct: 20 PSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL---KLKLHSFESHKDEIF 76
Query: 324 DLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSC----------MLTLPNAHTSDVNVIS 373
+QWSP + +LAS D + +WD I + +L + HT+ ++ S
Sbjct: 77 QVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFS 136
Query: 374 WNRTEPLIV-SGGDDGCIHVWDL 395
WN EP ++ S +D + VW +
Sbjct: 137 WNPNEPWVICSVSEDNIMQVWQM 159
Score = 119 (46.9 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 48/176 (27%), Positives = 74/176 (42%)
Query: 386 DDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVER 445
DD + +WD R + HTA V + ++P A+G AD +ALWDL
Sbjct: 3 DDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL---- 58
Query: 446 DSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSG--FNIF------ 497
R +LK L S + EI ++ W P TI++++ + N++
Sbjct: 59 ------RNLKLK-LHS----FESHKDEIFQVQWSPHNE-TILASSGTDRRLNVWDLSKIG 106
Query: 498 -----RTISDLPSQLLFIHLGQK-EIKELHWHPQLPGTIISTANSGFNIFRTISMS 547
D P +LLFIH G +I + W+P P I S + NI + M+
Sbjct: 107 EEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED--NIMQVWQMA 160
>TAIR|locus:2050372 [details] [associations]
symbol:FVE species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0009826 "unidimensional
cell growth" evidence=IMP] [GO:0009908 "flower development"
evidence=IMP] [GO:0009965 "leaf morphogenesis" evidence=IMP]
[GO:0010090 "trichome morphogenesis" evidence=IMP] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=ISS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006281 "DNA repair"
evidence=IMP] [GO:0010224 "response to UV-B" evidence=IEP]
[GO:0046872 "metal ion binding" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 GO:GO:0030154
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005730 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0046872
GO:GO:0006281 eggNOG:COG2319 GO:GO:0006351 GO:GO:0016568
EMBL:AC005917 GO:GO:0009908 GO:GO:0010224 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000160330
EMBL:AF498101 EMBL:AF498102 EMBL:AY849994 EMBL:AY059799
EMBL:AY057655 EMBL:AY081447 EMBL:AF028711 EMBL:Z37286 EMBL:Z37287
IPI:IPI00539247 PIR:G84577 RefSeq:NP_565456.2 UniGene:At.20032
ProteinModelPortal:O22607 SMR:O22607 DIP:DIP-59614N STRING:O22607
PaxDb:O22607 PRIDE:O22607 EnsemblPlants:AT2G19520.1 GeneID:816471
KEGG:ath:AT2G19520 GeneFarm:2818 TAIR:At2g19520 InParanoid:O22607
OMA:CIRELEQ PhylomeDB:O22607 ProtClustDB:CLSN2918036
Genevestigator:O22607 GermOnline:AT2G19520 Uniprot:O22607
Length = 507
Score = 236 (88.1 bits), Expect = 7.6e-17, Sum P(2) = 7.6e-17
Identities = 55/180 (30%), Positives = 93/180 (51%)
Query: 317 GHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWN- 375
GH ++VED+ +SP + S D + +WD R T + + AH +D++ + WN
Sbjct: 290 GHEDTVEDVAFSPTSAQEFCSVGDDSCLILWDART-GTNP-VTKVEKAHDADLHCVDWNP 347
Query: 376 RTEPLIVSGGDDGCIHVWDLRRFKK---GSSVATFKHHTAPVTTVEWHPTESSTFASGGA 432
+ LI++G D + ++D R+ GS + F+ H A V V+W P +SS F S
Sbjct: 348 HDDNLILTGSADNTVRLFDRRKLTANGVGSPIYKFEGHKAAVLCVQWSPDKSSVFGSSAE 407
Query: 433 DDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKE-IKELHWHPQLPGTIISTAN 491
D + +WD +R S+ R A+ P+ L F H G ++ + + HW+ P TI+S ++
Sbjct: 408 DGLLNIWDY--DRVSKKSDRAAKS---PAGLFFQHAGHRDKVVDFHWNASDPWTIVSVSD 462
Score = 129 (50.5 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 47/187 (25%), Positives = 83/187 (44%)
Query: 363 NAHTSDVNVISWNRTEPL-IVSGGDDGCIHVWDLRRFKKGSSVATF--KHHTAPVTTVEW 419
+ H V ++++ T S GDD C+ +WD R G++ T K H A + V+W
Sbjct: 289 HGHEDTVEDVAFSPTSAQEFCSVGDDSCLILWDART---GTNPVTKVEKAHDADLHCVDW 345
Query: 420 HPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWH 479
+P + + +G AD+ + L+D +R+ + S + + + + W
Sbjct: 346 NPHDDNLILTGSADNTVRLFD----------RRKLTANGVGSPIYKFEGHKAAVLCVQWS 395
Query: 480 PQLPGTIISTANSGF-NIF---RTI--SDL----PSQLLFIHLGQKE-IKELHWHPQLPG 528
P S+A G NI+ R SD P+ L F H G ++ + + HW+ P
Sbjct: 396 PDKSSVFGSSAEDGLLNIWDYDRVSKKSDRAAKSPAGLFFQHAGHRDKVVDFHWNASDPW 455
Query: 529 TIISTAN 535
TI+S ++
Sbjct: 456 TIVSVSD 462
Score = 49 (22.3 bits), Expect = 7.6e-17, Sum P(2) = 7.6e-17
Identities = 24/87 (27%), Positives = 35/87 (40%)
Query: 221 GHTNSAEDLQWSDLKTALQTVDDPFQL-----AEHNKKRGKGPGIPTPPLFSFSGHLTEG 275
G N +L + A T D P L + N+ G P L +GH
Sbjct: 165 GEVNRIRELPQNSKIVATHT-DSPDVLIWDVETQPNRHAVLGAANSRPDLI-LTGHQDNA 222
Query: 276 -FAMDWSSTEPGVLATGDCKRNIHIWT 301
FA+ TEP VL+ G K ++ +W+
Sbjct: 223 EFALAMCPTEPFVLSGGKDK-SVVLWS 248
Score = 46 (21.3 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 16/52 (30%), Positives = 24/52 (46%)
Query: 155 NKKRGKGPGIPTPPLFSFSGHLTEG-FAMDWSSTEPGVLATGDCKRNIHIWT 205
N+ G P L +GH FA+ TEP VL+ G K ++ +W+
Sbjct: 199 NRHAVLGAANSRPDLI-LTGHQDNAEFALAMCPTEPFVLSGGKDK-SVVLWS 248
>UNIPROTKB|H3BPK1 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000562592 Bgee:H3BPK1 Uniprot:H3BPK1
Length = 210
Score = 187 (70.9 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 45/135 (33%), Positives = 68/135 (50%)
Query: 307 AWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHT 366
AW++ + +V H ++V L R+LA+ D + +W IN +C+++L HT
Sbjct: 10 AWKLQE--IVAHASNVSSLVLGKASGRLLATGGDDCRVNLWS---INKPNCIMSL-TGHT 63
Query: 367 SDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESST 426
S V + N E LIV+G G I VWDL K + T H A + ++++HP
Sbjct: 64 SPVESVRLNTPEELIVAGSQSGSIRVWDLEAAK---ILRTLMGHKANICSLDFHPY-GEF 119
Query: 427 FASGGADDQIALWDL 441
ASG D I LWD+
Sbjct: 120 VASGSQDTNIKLWDI 134
Score = 164 (62.8 bits), Expect = 4.9e-11, P = 4.9e-11
Identities = 49/170 (28%), Positives = 84/170 (49%)
Query: 265 LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVED 324
+ S +GH + ++ ++ E ++A G +I +W + A ++ + L+GH ++
Sbjct: 56 IMSLTGHTSPVESVRLNTPEELIVA-GSQSGSIRVW---DLEAAKI-LRTLMGHKANICS 110
Query: 325 LQWSP-GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVS 383
L + P GE +AS S D +I++WD R K C+ H+ V + ++ + S
Sbjct: 111 LDFHPYGE--FVASGSQDTNIKLWDIR---RKGCVFRY-RGHSQAVRCLRFSPDGKWLAS 164
Query: 384 GGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGAD 433
DD + +WDL G ++ F HT PV VE+HP E ASG +D
Sbjct: 165 AADDHTVKLWDLTA---GKMMSEFPGHTGPVNVVEFHPNEY-LLASGSSD 210
Score = 150 (57.9 bits), Expect = 9.3e-09, P = 9.3e-09
Identities = 45/157 (28%), Positives = 78/157 (49%)
Query: 287 VLATG--DCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSI 344
+LATG DC+ +++W+ + L GHT+ VE ++ + E+ ++A S SI
Sbjct: 35 LLATGGDDCR--VNLWSINKPNCIM----SLTGHTSPVESVRLNTPEELIVAG-SQSGSI 87
Query: 345 RIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSV 404
R+WD + + TL H +++ + ++ + SG D I +WD+RR KG V
Sbjct: 88 RVWD---LEAAKILRTLMG-HKANICSLDFHPYGEFVASGSQDTNIKLWDIRR--KGC-V 140
Query: 405 ATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDL 441
++ H+ V + + P + AS D + LWDL
Sbjct: 141 FRYRGHSQAVRCLRFSP-DGKWLASAADDHTVKLWDL 176
Score = 53 (23.7 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 19/59 (32%), Positives = 31/59 (52%)
Query: 704 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRI 762
+A+G NI +W R G V + GH+ +V L++SP K LAS + D + ++
Sbjct: 120 VASGSQDTNIKLWDIRRKGC--VFRYR--GHSQAVRCLRFSPDGKW-LASAADDHTVKL 173
>UNIPROTKB|Q17GR9 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7159 "Aedes aegypti" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 EMBL:CH477256
RefSeq:XP_001662680.1 UniGene:Aae.8569 ProteinModelPortal:Q17GR9
STRING:Q17GR9 EnsemblMetazoa:AAEL002912-RA GeneID:5576487
KEGG:aag:AaeL_AAEL002912 VectorBase:AAEL002912 HOGENOM:HOG000208901
OMA:SWKCVCT OrthoDB:EOG45DV4X PhylomeDB:Q17GR9 Uniprot:Q17GR9
Length = 337
Score = 214 (80.4 bits), Expect = 2.5e-16, Sum P(2) = 2.5e-16
Identities = 55/177 (31%), Positives = 83/177 (46%)
Query: 269 SGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWS 328
+GH + W + VLAT + I IW + W GH+ ++ D+ WS
Sbjct: 11 TGHRGRAWGAGWHP-KGNVLATCGEDKTIRIWAEDASQRWVAKTVLSDGHSRTIRDVAWS 69
Query: 329 P-GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDD 387
P G+ LAS S D ++ IWD + C TL H ++V +SW+++ L+ + D
Sbjct: 70 PCGQ--YLASASFDATVAIWDKKS-GEFECNATL-EGHENEVKSVSWSKSGSLLATCSRD 125
Query: 388 GCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALW--DLA 442
+ VW++ + + A HT V VEWHP E AS D+ I L+ DLA
Sbjct: 126 KSVWVWEVAQEDEYECAAVLNTHTQDVKKVEWHPHED-ILASASYDNTIKLYKEDLA 181
Score = 172 (65.6 bits), Expect = 7.1e-10, P = 7.1e-10
Identities = 59/262 (22%), Positives = 116/262 (44%)
Query: 288 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIW 347
LA+ + IW +++G ++ + L GH N V+ + WS +LA+CS D S+ +W
Sbjct: 75 LASASFDATVAIWD-KKSGEFECNAT-LEGHENEVKSVSWSKSGS-LLATCSRDKSVWVW 131
Query: 348 DTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVW--DLRRFKKGSSVA 405
+ + C L N HT DV + W+ E ++ S D I ++ DL SS
Sbjct: 132 EVAQEDEYECAAVL-NTHTQDVKKVEWHPHEDILASASYDNTIKLYKEDLAD-SDWSSFD 189
Query: 406 TFKHHTAPVTTVEWHPTESSTFASGGADDQIALW-DLAVERDSEIEQRE-AELKDLPSQL 463
T H + V ++ + + + AS D + +W + + + + + L
Sbjct: 190 TLVSHESTVWSISFDGS-GNRLASCSDDQTVKIWQEYKPGNEFGVSCPDNTPVWKCVCTL 248
Query: 464 LFIHLGQKEIKELHWHPQLPGTIISTA--NSGFNIFRTIS-DLPSQLLFIHLGQK----- 515
H + + ++ W Q +++TA + IF+ + P + F +G K
Sbjct: 249 AGYH--SRSVYDISWCKQ--SGLLATACGDDMVRIFKEVEGSSPHEPTFEMVGSKHAHSQ 304
Query: 516 EIKELHWHPQLPGTIISTANSG 537
++ + W+P + G +++T++ G
Sbjct: 305 DVNTVEWNPTVVGLLVTTSDDG 326
Score = 140 (54.3 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 66/274 (24%), Positives = 114/274 (41%)
Query: 192 LATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVD-DP----FQ 246
LA+ + IW +++G ++ + L GH N + + WS + L T D ++
Sbjct: 75 LASASFDATVAIWD-KKSGEFECNAT-LEGHENEVKSVSWSKSGSLLATCSRDKSVWVWE 132
Query: 247 LAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAG 306
+A+ ++ + H + ++W E +LA+ I ++ A
Sbjct: 133 VAQEDEYECAAV---------LNTHTQDVKKVEWHPHED-ILASASYDNTIKLYKEDLAD 182
Query: 307 A-WQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWD----------TRVINTK 355
+ W LV H ++V + + R LASCS D +++IW + NT
Sbjct: 183 SDWS-SFDTLVSHESTVWSISFDGSGNR-LASCSDDQTVKIWQEYKPGNEFGVSCPDNTP 240
Query: 356 --SCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSV--ATF---- 407
C+ TL H+ V ISW + L+ + D + ++ + +GSS TF
Sbjct: 241 VWKCVCTLAGYHSRSVYDISWCKQSGLLATACGDDMVRIF---KEVEGSSPHEPTFEMVG 297
Query: 408 -KH-HTAPVTTVEWHPTESSTFASGGADDQIALW 439
KH H+ V TVEW+PT + D + LW
Sbjct: 298 SKHAHSQDVNTVEWNPTVVGLLVTTSDDGDVKLW 331
Score = 55 (24.4 bits), Expect = 2.5e-16, Sum P(2) = 2.5e-16
Identities = 26/104 (25%), Positives = 42/104 (40%)
Query: 664 WSSTEPGVLATGDCKRNIHIW--TPREAG--AWSVY--LYTNRFGVLATGDCKRNIHIWT 717
W +PG C N +W AG + SVY + + G+LAT + I+
Sbjct: 222 WQEYKPGNEFGVSCPDNTPVWKCVCTLAGYHSRSVYDISWCKQSGLLATACGDDMVRIFK 281
Query: 718 PREAGAWQVDQKPLVG----HTNSVEDLQWSPGEKRVLASCSVD 757
E + +VG H+ V ++W+P +L + S D
Sbjct: 282 EVEGSSPHEPTFEMVGSKHAHSQDVNTVEWNPTVVGLLVTTSDD 325
Score = 47 (21.6 bits), Expect = 1.7e-15, Sum P(2) = 1.7e-15
Identities = 12/47 (25%), Positives = 21/47 (44%)
Query: 639 GKGPGIPTPPLF-SFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIW 684
G P PT + S H + ++W+ T G+L T ++ +W
Sbjct: 285 GSSPHEPTFEMVGSKHAHSQDVNTVEWNPTVVGLLVTTSDDGDVKLW 331
>TAIR|locus:2134408 [details] [associations]
symbol:NFC5 "AT4G29730" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006351 GO:GO:0016568
EMBL:AL161575 EMBL:AL079344 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000160330
ProtClustDB:CLSN2918036 EMBL:BT010610 EMBL:AK176425 IPI:IPI00548369
PIR:T09936 RefSeq:NP_194702.2 UniGene:At.31893
ProteinModelPortal:Q9SU78 SMR:Q9SU78 STRING:Q9SU78 PaxDb:Q9SU78
PRIDE:Q9SU78 EnsemblPlants:AT4G29730.1 GeneID:829094
KEGG:ath:AT4G29730 GeneFarm:2946 TAIR:At4g29730 InParanoid:Q9SU78
OMA:VGKKSER PhylomeDB:Q9SU78 Genevestigator:Q9SU78
GermOnline:AT4G29730 Uniprot:Q9SU78
Length = 487
Score = 231 (86.4 bits), Expect = 3.6e-16, Sum P(2) = 3.6e-16
Identities = 55/181 (30%), Positives = 88/181 (48%)
Query: 317 GHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWN- 375
GH ++VED+ + P + S D + +WD R T M + AH +D++ + WN
Sbjct: 270 GHKDTVEDVAFCPSSAQEFCSVGDDSCLMLWDART-GTSPAM-KVEKAHDADLHCVDWNP 327
Query: 376 RTEPLIVSGGDDGCIHVWDLRRFKK---GSSVATFKHHTAPVTTVEWHPTESSTFASGGA 432
LI++G D + V+D R GS V F+ H A V V+W P +SS F S
Sbjct: 328 HDNNLILTGSADNTVRVFDRRNLTSNGVGSPVYKFEGHRAAVLCVQWSPDKSSVFGSSAE 387
Query: 433 DDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKE-IKELHWHPQLPGTIISTAN 491
D + +WD +R + +R + P L F H G ++ + + HW P TI+S ++
Sbjct: 388 DGLLNIWDC--DRVGKKSERATKT---PDGLFFQHAGHRDKVVDFHWSLLNPWTIVSVSD 442
Query: 492 S 492
+
Sbjct: 443 N 443
Score = 119 (46.9 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 44/188 (23%), Positives = 79/188 (42%)
Query: 363 NAHTSDVNVISWNRTEPL-IVSGGDDGCIHVWDLRRFKKGSSVA--TFKHHTAPVTTVEW 419
N H V +++ + S GDD C+ +WD R G+S A K H A + V+W
Sbjct: 269 NGHKDTVEDVAFCPSSAQEFCSVGDDSCLMLWDART---GTSPAMKVEKAHDADLHCVDW 325
Query: 420 HPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWH 479
+P +++ +G AD+ + ++D +R + S + + + + W
Sbjct: 326 NPHDNNLILTGSADNTVRVFD----------RRNLTSNGVGSPVYKFEGHRAAVLCVQWS 375
Query: 480 PQLPGTIISTANSGF-NIF---------RTISDLPSQLLFIHLGQKE-IKELHWHPQLPG 528
P S+A G NI+ + P L F H G ++ + + HW P
Sbjct: 376 PDKSSVFGSSAEDGLLNIWDCDRVGKKSERATKTPDGLFFQHAGHRDKVVDFHWSLLNPW 435
Query: 529 TIISTANS 536
TI+S +++
Sbjct: 436 TIVSVSDN 443
Score = 47 (21.6 bits), Expect = 3.6e-16, Sum P(2) = 3.6e-16
Identities = 25/85 (29%), Positives = 34/85 (40%)
Query: 221 GHTNSAEDLQWSDLKTALQTVDDPFQL---AEHNKKRGKGPGIP-TPPLFSFSGHLTEG- 275
G N +L + A T D P L E R G P + P GH +
Sbjct: 145 GEVNRIRELPQNSKIVATHT-DSPDILIWNTETQPDRYAVLGAPDSRPDLLLIGHQDDAE 203
Query: 276 FAMDWSSTEPGVLATGDCKRNIHIW 300
FA+ TEP VL+ G K ++ +W
Sbjct: 204 FALAMCPTEPFVLSGGKDK-SVILW 227
Score = 45 (20.9 bits), Expect = 5.8e-16, Sum P(2) = 5.8e-16
Identities = 15/44 (34%), Positives = 22/44 (50%)
Query: 163 GIP-TPPLFSFSGHLTEG-FAMDWSSTEPGVLATGDCKRNIHIW 204
G P + P GH + FA+ TEP VL+ G K ++ +W
Sbjct: 185 GAPDSRPDLLLIGHQDDAEFALAMCPTEPFVLSGGKDK-SVILW 227
>UNIPROTKB|H3BPD8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
EMBL:AC018552 EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845
HGNC:HGNC:6217 Ensembl:ENST00000566726 Bgee:H3BPD8 Uniprot:H3BPD8
Length = 208
Score = 179 (68.1 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 43/127 (33%), Positives = 63/127 (49%)
Query: 315 LVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISW 374
+V H ++V L R+LA+ D + +W IN +C+++L HTS V +
Sbjct: 20 IVAHASNVSSLVLGKASGRLLATGGDDCRVNLWS---INKPNCIMSL-TGHTSPVESVRL 75
Query: 375 NRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADD 434
N E LIV+G G I VWDL K + T H A + ++++HP ASG D
Sbjct: 76 NTPEELIVAGSQSGSIRVWDLEAAK---ILRTLMGHKANICSLDFHPY-GEFVASGSQDT 131
Query: 435 QIALWDL 441
I LWD+
Sbjct: 132 NIKLWDI 138
Score = 155 (59.6 bits), Expect = 4.5e-10, P = 4.5e-10
Identities = 45/160 (28%), Positives = 79/160 (49%)
Query: 265 LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVED 324
+ S +GH + ++ ++ E ++A G +I +W + A ++ + L+GH ++
Sbjct: 60 IMSLTGHTSPVESVRLNTPEELIVA-GSQSGSIRVW---DLEAAKI-LRTLMGHKANICS 114
Query: 325 LQWSP-GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVS 383
L + P GE +AS S D +I++WD R K C+ H+ V + ++ + S
Sbjct: 115 LDFHPYGE--FVASGSQDTNIKLWDIR---RKGCVFRY-RGHSQAVRCLRFSPDGKWLAS 168
Query: 384 GGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTE 423
DD + +WDL G ++ F HT PV VE+HP E
Sbjct: 169 AADDHTVKLWDLTA---GKMMSEFPGHTGPVNVVEFHPNE 205
Score = 150 (57.9 bits), Expect = 6.2e-09, P = 6.2e-09
Identities = 45/157 (28%), Positives = 78/157 (49%)
Query: 287 VLATG--DCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSI 344
+LATG DC+ +++W+ + L GHT+ VE ++ + E+ ++A S SI
Sbjct: 39 LLATGGDDCR--VNLWSINKPNCIM----SLTGHTSPVESVRLNTPEELIVAG-SQSGSI 91
Query: 345 RIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSV 404
R+WD + + TL H +++ + ++ + SG D I +WD+RR KG V
Sbjct: 92 RVWD---LEAAKILRTLMG-HKANICSLDFHPYGEFVASGSQDTNIKLWDIRR--KGC-V 144
Query: 405 ATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDL 441
++ H+ V + + P + AS D + LWDL
Sbjct: 145 FRYRGHSQAVRCLRFSP-DGKWLASAADDHTVKLWDL 180
Score = 53 (23.7 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 19/59 (32%), Positives = 31/59 (52%)
Query: 704 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRI 762
+A+G NI +W R G V + GH+ +V L++SP K LAS + D + ++
Sbjct: 124 VASGSQDTNIKLWDIRRKGC--VFRYR--GHSQAVRCLRFSPDGKW-LASAADDHTVKL 177
>DICTYBASE|DDB_G0279801 [details] [associations]
symbol:pex7 "peroxisomal biogenesis factor 7"
species:44689 "Dictyostelium discoideum" [GO:0016558 "protein
import into peroxisome matrix" evidence=IEA] [GO:0005777
"peroxisome" evidence=IEA;ISS] [GO:0005053 "peroxisome matrix
targeting signal-2 binding" evidence=IEA;ISS] [GO:0007031
"peroxisome organization" evidence=ISS] [GO:0015031 "protein
transport" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0279801 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GenomeReviews:CM000152_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007031 GO:GO:0016558 EMBL:AAFI02000033
HSSP:P46680 KO:K13341 OMA:GHEYAVR GO:GO:0005053 RefSeq:XP_641489.1
ProteinModelPortal:Q54WA3 STRING:Q54WA3 EnsemblProtists:DDB0233068
GeneID:8622229 KEGG:ddi:DDB_G0279801 InParanoid:Q54WA3
ProtClustDB:CLSZ2729075 PANTHER:PTHR22850:SF4 Uniprot:Q54WA3
Length = 316
Score = 217 (81.4 bits), Expect = 2.2e-15, P = 2.2e-15
Identities = 53/191 (27%), Positives = 92/191 (48%)
Query: 264 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVE 323
P+ SF H E +++DW+ TG ++I IW PR + + ++ H +
Sbjct: 96 PIKSFEEHTKEVYSVDWNLVTKDTFITGSWDQSIKIWNPRMDRSLKTFRE----HRYCIY 151
Query: 324 DLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR-TEPLIV 382
WSP + AS S D +++IWD+R + +S L AH ++ WN+ + +V
Sbjct: 152 SAIWSPRNAHLFASVSGDRTLKIWDSR--DNRS--LNTIKAHDHEILTCDWNKYNDKEVV 207
Query: 383 SGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442
+G D I +WD+R + +++ + HT V ++ P S AS D + +WD A
Sbjct: 208 TGSVDKTIRIWDIRYPDRPTTI--LRGHTYAVRRIKCSPHSESMLASCSYDMSVIVWDRA 265
Query: 443 VERDSEIEQRE 453
E+D I + +
Sbjct: 266 REQDPIIARMD 276
Score = 167 (63.8 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 59/232 (25%), Positives = 91/232 (39%)
Query: 168 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAE 227
P+ SF H E +++DW+ TG ++I IW PR K H
Sbjct: 96 PIKSFEEHTKEVYSVDWNLVTKDTFITGSWDQSIKIWNPR----MDRSLKTFREHRYCIY 151
Query: 228 DLQWSDLKTAL-QTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPG 286
WS L +V L + + + L + H E DW+
Sbjct: 152 SAIWSPRNAHLFASVSGDRTLKIWDSRDNRS-------LNTIKAHDHEILTCDWNKYNDK 204
Query: 287 VLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRI 346
+ TG + I IW R L GHT +V ++ SP + +LASCS D+S+ +
Sbjct: 205 EVVTGSVDKTIRIWDIRYPDR---PTTILRGHTYAVRRIKCSPHSESMLASCSYDMSVIV 261
Query: 347 WDTRVINTKSCMLTLPNAHTSDVNVISWNR-TEPLIVSGGDDGCIHVWDLRR 397
WD + ++ + HT V + WN + + S D + VW+L R
Sbjct: 262 WDRA--REQDPIIARMDHHTEFVVGLDWNMFIDGQMASCSWDEQVCVWNLGR 311
Score = 157 (60.3 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 61/260 (23%), Positives = 105/260 (40%)
Query: 184 WSSTEPGVLATGDCKRNIHIW-TPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVD 242
WS +A+ +I IW T +G + K HT + W+ L T D
Sbjct: 66 WSEENECHVASSSGDGSIKIWDTQAPSGGRPI--KSFEEHTKEVYSVDWN-----LVTKD 118
Query: 243 DPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTP 302
+ + P + L +F H ++ WS + A+ R + IW
Sbjct: 119 TFITGSWDQSIKIWNPRMDRS-LKTFREHRYCIYSAIWSPRNAHLFASVSGDRTLKIWDS 177
Query: 303 REAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLP 362
R+ + + H + + W+ + + + SVD +IRIWD R + + +L
Sbjct: 178 RDNRSLNT----IKAHDHEILTCDWNKYNDKEVVTGSVDKTIRIWDIRYPDRPTTIL--- 230
Query: 363 NAHTSDVNVISWN-RTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHP 421
HT V I + +E ++ S D + VWD R ++ +A HHT V ++W+
Sbjct: 231 RGHTYAVRRIKCSPHSESMLASCSYDMSVIVWDRAR-EQDPIIARMDHHTEFVVGLDWNM 289
Query: 422 TESSTFASGGADDQIALWDL 441
AS D+Q+ +W+L
Sbjct: 290 FIDGQMASCSWDEQVCVWNL 309
Score = 149 (57.5 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 39/135 (28%), Positives = 65/135 (48%)
Query: 324 DLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR-TEPLIV 382
D WS + +AS S D SI+IWDT+ + + + HT +V + WN T+ +
Sbjct: 63 DCTWSEENECHVASSSGDGSIKIWDTQAPSGGRPIKSFEE-HTKEVYSVDWNLVTKDTFI 121
Query: 383 SGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442
+G D I +W+ R + S+ TF+ H + + W P + FAS D + +WD
Sbjct: 122 TGSWDQSIKIWNPRMDR---SLKTFREHRYCIYSAIWSPRNAHLFASVSGDRTLKIWDSR 178
Query: 443 VERD-SEIEQREAEL 456
R + I+ + E+
Sbjct: 179 DNRSLNTIKAHDHEI 193
Score = 52 (23.4 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 26/119 (21%), Positives = 42/119 (35%)
Query: 649 LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSVYLYTNRFGV--LAT 706
L + H E DW+ + TG + I IW R + L + + V +
Sbjct: 183 LNTIKAHDHEILTCDWNKYNDKEVVTGSVDKTIRIWDIRYPDRPTTILRGHTYAVRRIKC 242
Query: 707 GDCKRNIHIWTPREAGA--WQV--DQKPLVG----HTNSVEDLQWSPGEKRVLASCSVD 757
++ + W +Q P++ HT V L W+ +ASCS D
Sbjct: 243 SPHSESMLASCSYDMSVIVWDRAREQDPIIARMDHHTEFVVGLDWNMFIDGQMASCSWD 301
>TAIR|locus:2043929 [details] [associations]
symbol:AT2G43770 "AT2G43770" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE EMBL:AC002333 UniGene:At.66405 EMBL:AY093182
EMBL:BT008828 IPI:IPI00529336 PIR:C84870 RefSeq:NP_181905.1
ProteinModelPortal:O22826 SMR:O22826 IntAct:O22826 STRING:O22826
PaxDb:O22826 PRIDE:O22826 EnsemblPlants:AT2G43770.1 GeneID:818980
KEGG:ath:AT2G43770 TAIR:At2g43770 InParanoid:O22826
PhylomeDB:O22826 ProtClustDB:CLSN2683090 ArrayExpress:O22826
Genevestigator:O22826 Uniprot:O22826
Length = 343
Score = 192 (72.6 bits), Expect = 3.0e-15, Sum P(2) = 3.0e-15
Identities = 58/199 (29%), Positives = 96/199 (48%)
Query: 250 HNKKRGKGPGIPT------PPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPR 303
H+ +G GP P+ SGH + + M ++ ++A+G R I +W R
Sbjct: 25 HSASQGPGPNGKNRTSSLEAPIMLLSGHPSAVYTMKFNPAGT-LIASGSHDREIFLW--R 81
Query: 304 EAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPN 363
G + + L GH N++ DL W+ +++ S S D ++R WD + T + +
Sbjct: 82 VHGDCK-NFMVLKGHKNAILDLHWTSDGSQIV-SASPDKTVRAWD---VETGKQIKKMAE 136
Query: 364 AHTSDVN-VISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPT 422
H+S VN R PLI+SG DDG +WD+R+ +G+ + TF +T V +
Sbjct: 137 -HSSFVNSCCPTRRGPPLIISGSDDGTAKLWDMRQ--RGA-IQTFPDKYQ-ITAVSFSDA 191
Query: 423 ESSTFASGGADDQIALWDL 441
F +GG D+ + +WDL
Sbjct: 192 ADKIF-TGGVDNDVKVWDL 209
Score = 155 (59.6 bits), Expect = 6.0e-08, P = 6.0e-08
Identities = 66/274 (24%), Positives = 120/274 (43%)
Query: 270 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSP 329
GH + W+S +++ K + W E G Q+ K + H++ V +
Sbjct: 94 GHKNAILDLHWTSDGSQIVSASPDK-TVRAWDV-ETGK-QI--KKMAEHSSFVNSCCPTR 148
Query: 330 GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGC 389
++ S S D + ++WD R + + T P+ + + +S++ I +GG D
Sbjct: 149 RGPPLIISGSDDGTAKLWDMR---QRGAIQTFPDKY--QITAVSFSDAADKIFTGGVDND 203
Query: 390 IHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEI 449
+ VWDLR KG + T + H +T + P + S + G D+++ +WD+ R
Sbjct: 204 VKVWDLR---KGEATMTLEGHQDTITGMSLSP-DGSYLLTNGMDNKLCVWDM---RPYAP 256
Query: 450 EQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSG--FNIFRTISDLPSQL 507
+ R ++ + Q H +K + + W P GT ++ +S +I+ T S
Sbjct: 257 QNRCVKIFE-GHQ----HNFEKNLLKCSWSPD--GTKVTAGSSDRMVHIWDTTSRRTIYK 309
Query: 508 LFIHLGQKEIKELHWHPQLPGTIISTANSGFNIF 541
L H G + E +HP P II + +S NI+
Sbjct: 310 LPGHTGS--VNECVFHPTEP--IIGSCSSDKNIY 339
Score = 72 (30.4 bits), Expect = 3.0e-15, Sum P(2) = 3.0e-15
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 704 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRIG 763
+ G R +HIW + + + K L GHT SV + + P E ++ SCS D++ +G
Sbjct: 287 VTAGSSDRMVHIW---DTTSRRTIYK-LPGHTGSVNECVFHPTEP-IIGSCSSDKNIYLG 341
Score = 39 (18.8 bits), Expect = 7.8e-12, Sum P(2) = 7.8e-12
Identities = 9/21 (42%), Positives = 10/21 (47%)
Query: 664 WSSTEPGVLATGDCKRNIHIW 684
WS V A G R +HIW
Sbjct: 280 WSPDGTKVTA-GSSDRMVHIW 299
>FB|FBgn0015754 [details] [associations]
symbol:Lis-1 "Lissencephaly-1" species:7227 "Drosophila
melanogaster" [GO:0030706 "germarium-derived oocyte
differentiation" evidence=IMP] [GO:0048135 "female germ-line cyst
formation" evidence=IMP] [GO:0045478 "fusome organization"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0050790
"regulation of catalytic activity" evidence=ISS] [GO:0030234
"enzyme regulator activity" evidence=ISS] [GO:0008104 "protein
localization" evidence=IGI;IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IMP] [GO:0051647 "nucleus
localization" evidence=IMP] [GO:0030716 "oocyte fate determination"
evidence=IGI] [GO:0005938 "cell cortex" evidence=IDA] [GO:0007303
"cytoplasmic transport, nurse cell to oocyte" evidence=IMP]
[GO:0045502 "dynein binding" evidence=ISS] [GO:0007312 "oocyte
nucleus migration involved in oocyte dorsal/ventral axis
specification" evidence=IMP] [GO:0030381 "chorion-containing
eggshell pattern formation" evidence=IMP] [GO:0030473 "nuclear
migration along microtubule" evidence=IGI] [GO:0008298
"intracellular mRNA localization" evidence=IMP] [GO:0030424 "axon"
evidence=IDA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0030425 "dendrite" evidence=IDA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0008088 "axon cargo transport"
evidence=IMP] [GO:0016319 "mushroom body development" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0030286 "dynein
complex" evidence=ISS;IDA] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] [GO:0034501 "protein localization to kinetochore"
evidence=IMP] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0051299
"centrosome separation" evidence=IMP] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IGI;IMP] [GO:0051383 "kinetochore
organization" evidence=IMP] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0031616 "spindle pole centrosome" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:2001019 "positive
regulation of retrograde axon cargo transport" evidence=IMP]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP]
[GO:0019827 "stem cell maintenance" evidence=IDA] [GO:0030510
"regulation of BMP signaling pathway" evidence=IDA] [GO:0046716
"muscle cell homeostasis" evidence=IGI;IMP] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0005813 "centrosome"
evidence=IDA] [GO:0051642 "centrosome localization" evidence=IMP]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:AE013599 GO:GO:0005938
GO:GO:0007294 GO:GO:0006886 GO:GO:0030234 GO:GO:0000776
GO:GO:0007067 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008088 GO:GO:0007283 GO:GO:0051642 GO:GO:0007303
GO:GO:0048813 GO:GO:0048814 GO:GO:0046716 GO:GO:0007405
GO:GO:0016319 GO:GO:0005869 GO:GO:0030510 InterPro:IPR013720
Pfam:PF08513 GO:GO:0030473 GO:GO:0034501 GO:GO:0007093
GO:GO:0008298 GO:GO:0046843 GO:GO:0030286 GO:GO:0019827
GO:GO:0051383 GO:GO:0030723 GO:GO:0031616 GO:GO:0042623
GO:GO:0000777 GO:GO:0045502 GO:GO:0007312 GO:GO:0042052
GO:GO:0072499 GO:GO:0048142 GO:GO:0051299 GO:GO:0005828
GO:GO:0030381 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:36791 EMBL:AF152419 EMBL:AF117606
EMBL:AF098070 EMBL:AY089600 EMBL:BT021404 RefSeq:NP_001246361.1
RefSeq:NP_477160.1 RefSeq:NP_788370.1 RefSeq:NP_788371.1
RefSeq:NP_788372.1 RefSeq:NP_788373.1 RefSeq:NP_995852.1
UniGene:Dm.646 ProteinModelPortal:Q7KNS3 SMR:Q7KNS3 DIP:DIP-59474N
IntAct:Q7KNS3 MINT:MINT-774081 STRING:Q7KNS3 PaxDb:Q7KNS3
EnsemblMetazoa:FBtr0087236 EnsemblMetazoa:FBtr0087240
EnsemblMetazoa:FBtr0087241 EnsemblMetazoa:FBtr0304747 GeneID:36791
KEGG:dme:Dmel_CG8440 FlyBase:FBgn0015754 InParanoid:Q8SXJ6
OrthoDB:EOG4ZKH2S PhylomeDB:Q7KNS3 GenomeRNAi:36791 NextBio:800399
Bgee:Q7KNS3 GermOnline:CG8440 GO:GO:0043143 Uniprot:Q7KNS3
Length = 411
Score = 203 (76.5 bits), Expect = 7.4e-15, Sum P(2) = 7.4e-15
Identities = 62/209 (29%), Positives = 103/209 (49%)
Query: 248 AEHNKKRGKGPGIPTPP-LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAG 306
A KR G IP PP FS +GH + + +++ + I IW E G
Sbjct: 83 APTKNKRTPGEWIPRPPEKFSLTGHRASITRVIFHPIFALMVSASE-DATIRIWD-FETG 140
Query: 307 AWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHT 366
++ + L GHT+SV+D+ + + ++LASCS DLSI++WD + + C+ T+ + H
Sbjct: 141 EYE---RSLKGHTDSVQDVAFD-AQGKLLASCSADLSIKLWDFQ--QSYECIKTM-HGHD 193
Query: 367 SDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESST 426
+V+ +++ ++S D I +W++ G V T+ H V V H E S
Sbjct: 194 HNVSSVAFVPAGDYVLSASRDRTIKMWEVAT---GYCVKTYTGHREWVRMVRVH-IEGSI 249
Query: 427 FASGGADDQIALWDLAVERDSEIEQREAE 455
FA+ D I +W L +D ++E R+ E
Sbjct: 250 FATCSNDQTIRVW-LTNSKDCKVELRDHE 277
Score = 143 (55.4 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 40/109 (36%), Positives = 53/109 (48%)
Query: 288 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIW 347
LA+G + I IW G + L GH N V L + PG K L S S D +IR+W
Sbjct: 312 LASGSRDKTIRIWDV-SVGLCLLT---LSGHDNWVRGLAFHPGGK-YLVSASDDKTIRVW 366
Query: 348 DTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLR 396
D R K CM TL AH I +++ P ++SG D + VW+ R
Sbjct: 367 DLR---NKRCMKTL-YAHQHFCTSIDFHKAHPYVISGSVDQTVKVWECR 411
Score = 129 (50.5 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 53/193 (27%), Positives = 86/193 (44%)
Query: 267 SFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQ 326
+++GH E M E + AT + I +W +V+ L H ++VE +
Sbjct: 230 TYTGH-REWVRMVRVHIEGSIFATCSNDQTIRVWLTNSKDC-KVE---LRDHEHTVECIA 284
Query: 327 WSP-----------G--EKR------VLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTS 367
W+P G K+ LAS S D +IRIWD ++ C+LTL + H +
Sbjct: 285 WAPEAAASAINEAAGADNKKGHHQGPFLASGSRDKTIRIWD---VSVGLCLLTL-SGHDN 340
Query: 368 DVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTF 427
V ++++ +VS DD I VWDLR K+ + T H T++++H
Sbjct: 341 WVRGLAFHPGGKYLVSASDDKTIRVWDLRN-KR--CMKTLYAHQHFCTSIDFHKAHPYVI 397
Query: 428 ASGGADDQIALWD 440
SG D + +W+
Sbjct: 398 -SGSVDQTVKVWE 409
Score = 65 (27.9 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 23/79 (29%), Positives = 36/79 (45%)
Query: 152 AEHNKKRGKGPGIPTPP-LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAG 210
A KR G IP PP FS +GH + + +++ + I IW E G
Sbjct: 83 APTKNKRTPGEWIPRPPEKFSLTGHRASITRVIFHPIFALMVSASE-DATIRIWD-FETG 140
Query: 211 AWQVDQKPLGGHTNSAEDL 229
++ + L GHT+S +D+
Sbjct: 141 EYE---RSLKGHTDSVQDV 156
Score = 61 (26.5 bits), Expect = 7.4e-15, Sum P(2) = 7.4e-15
Identities = 21/59 (35%), Positives = 28/59 (47%)
Query: 704 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRI 762
LA+G + I IW G + L GH N V L + PG K L S S D++ R+
Sbjct: 312 LASGSRDKTIRIWDV-SVGLCLLT---LSGHDNWVRGLAFHPGGK-YLVSASDDKTIRV 365
>DICTYBASE|DDB_G0269728 [details] [associations]
symbol:ciao1 "putative cytosolic iron-sulfur assembly
protein" species:44689 "Dictyostelium discoideum" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0269728 EMBL:AAFI02000005
GenomeReviews:CM000150_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 OMA:SWKCVCT
HSSP:P63005 RefSeq:XP_646229.1 ProteinModelPortal:Q55DA2
STRING:Q55DA2 EnsemblProtists:DDB0266672 GeneID:8617183
KEGG:ddi:DDB_G0269728 ProtClustDB:CLSZ2497289 Uniprot:Q55DA2
Length = 333
Score = 198 (74.8 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
Identities = 64/252 (25%), Positives = 115/252 (45%)
Query: 191 VLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEH 250
+LAT + I IW+ G W + Q L GH + + WS L F +
Sbjct: 38 ILATCANDKYIQIWSKDTNGKWGLVQS-LEGHEKTVRRVAWSPCGRFLAGAS--FDASTS 94
Query: 251 NKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQV 310
++ K + + S GH E ++ W ST +LAT ++I IW + ++
Sbjct: 95 IWEKSKDE-LEFTHVSSLEGHTYEVKSVAWDSTGT-LLATCSRDKSIWIWQMEDDNDFEC 152
Query: 311 DQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVN 370
GH ++ + W P E+ +LAS S D +I+ W + C+ TL H S +
Sbjct: 153 -LSINSGHGQDIKCVLWHPNEE-LLASSSYDDTIKFWKD-IDGDWECINTL-TGHESSIW 208
Query: 371 VISWNRTEPLIVSGGDDGCIHVWDL-RRFKKGSSVATFKHHTA-PVTTVEWHPTESSTFA 428
+++N+ +VS G+D + W + +K ++ FK+ + P+ +++W ++T
Sbjct: 209 DLAFNKDGDKLVSCGEDKLVLFWKFDKENEKWINIFKFKNENSRPIYSIDWSSL-TNTIV 267
Query: 429 SGGADDQIALWD 440
+G ADD I ++
Sbjct: 268 TGSADDSIIFYE 279
Score = 141 (54.7 bits), Expect = 9.3e-08, Sum P(2) = 9.3e-08
Identities = 65/280 (23%), Positives = 104/280 (37%)
Query: 267 SFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQ 326
S GH + WS LA + IW + L GHT V+ +
Sbjct: 64 SLEGHEKTVRRVAWSPCGR-FLAGASFDASTSIWEKSKDELEFTHVSSLEGHTYEVKSVA 122
Query: 327 W-SPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGG 385
W S G +LA+CS D SI IW N C L++ + H D+ + W+ E L+ S
Sbjct: 123 WDSTGT--LLATCSRDKSIWIWQMEDDNDFEC-LSINSGHGQDIKCVLWHPNEELLASSS 179
Query: 386 DDGCIHVW-DLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444
D I W D+ + T H + + + ++ + S G D + W
Sbjct: 180 YDDTIKFWKDIDG--DWECINTLTGHESSIWDLAFNK-DGDKLVSCGEDKLVLFWKF--- 233
Query: 445 RDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIF--RTISD 502
D E E+ K F + + I + W L TI++ + IF + D
Sbjct: 234 -DKENEKWINIFK-------FKNENSRPIYSIDWS-SLTNTIVTGSADDSIIFYEQESDD 284
Query: 503 LPSQLLFI----HLGQKEIKELHWHPQLPGTIISTANSGF 538
P + I + ++ W+P+ + S + GF
Sbjct: 285 TPDKYKIILKKKNAHDSDVNCTKWNPKFKNILASCGDDGF 324
Score = 130 (50.8 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 65/277 (23%), Positives = 100/277 (36%)
Query: 171 SFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQ 230
S GH + WS LA + IW + L GHT + +
Sbjct: 64 SLEGHEKTVRRVAWSPCGR-FLAGASFDASTSIWEKSKDELEFTHVSSLEGHTYEVKSVA 122
Query: 231 WSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLAT 290
W T L T + + L SGH + + W E +LA+
Sbjct: 123 WDSTGTLLATCSRDKSIWIWQMEDDND----FECLSINSGHGQDIKCVLWHPNEE-LLAS 177
Query: 291 GDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSP-GEKRVLASCSVDLSIRIWDT 349
I W + G W+ L GH +S+ DL ++ G+K L SC D + W
Sbjct: 178 SSYDDTIKFWKDID-GDWECINT-LTGHESSIWDLAFNKDGDK--LVSCGEDKLVLFWKF 233
Query: 350 RVINTKSC-MLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFK---KGSSVA 405
N K + N ++ + I W+ IV+G D I ++ K +
Sbjct: 234 DKENEKWINIFKFKNENSRPIYSIDWSSLTNTIVTGSADDSIIFYEQESDDTPDKYKIIL 293
Query: 406 TFKH-HTAPVTTVEWHPTESSTFASGGADDQIALWDL 441
K+ H + V +W+P + AS G D I +W+L
Sbjct: 294 KKKNAHDSDVNCTKWNPKFKNILASCGDDGFIKIWEL 330
Score = 120 (47.3 bits), Expect = 0.00043, P = 0.00043
Identities = 55/233 (23%), Positives = 99/233 (42%)
Query: 171 SFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQ 230
S GH E ++ W ST +LAT ++I IW + ++ GH + +
Sbjct: 110 SLEGHTYEVKSVAWDSTGT-LLATCSRDKSIWIWQMEDDNDFEC-LSINSGHGQDIKCVL 167
Query: 231 W--SDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVL 288
W ++ A + DD + + G I T +GH + + + ++ ++
Sbjct: 168 WHPNEELLASSSYDDTIKFWKDID--GDWECINT-----LTGHESSIWDLAFNKDGDKLV 220
Query: 289 ATGDCKRNIHIWT-PREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIW 347
+ G+ K + W +E W K ++ + + WS ++ S D SI +
Sbjct: 221 SCGEDKL-VLFWKFDKENEKWINIFKFKNENSRPIYSIDWSSLTNTIVTG-SADDSIIFY 278
Query: 348 DTRVINTKS---CMLTLPNAHTSDVNVISWN-RTEPLIVSGGDDGCIHVWDLR 396
+ +T +L NAH SDVN WN + + ++ S GDDG I +W+L+
Sbjct: 279 EQESDDTPDKYKIILKKKNAHDSDVNCTKWNPKFKNILASCGDDGFIKIWELQ 331
Score = 56 (24.8 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 734 HTNSVEDLQWSPGEKRVLASCSVDRSNRIGARRD 767
H + V +W+P K +LASC D +I +D
Sbjct: 299 HDSDVNCTKWNPKFKNILASCGDDGFIKIWELQD 332
>UNIPROTKB|Q7PS24 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7165 "Anopheles gambiae"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT OrthoDB:EOG45DV4X
EMBL:AAAB01008846 RefSeq:XP_310648.3 HSSP:P63005
ProteinModelPortal:Q7PS24 STRING:Q7PS24
EnsemblMetazoa:AGAP000444-RA GeneID:1271794
KEGG:aga:AgaP_AGAP000444 VectorBase:AGAP000444 CTD:1271794
PhylomeDB:Q7PS24 Uniprot:Q7PS24
Length = 341
Score = 205 (77.2 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 82/344 (23%), Positives = 148/344 (43%)
Query: 169 LFSFSGHLTEGFAMDWSSTEPGVLATGDC--KRNIHIWTPREAGAWQVDQKPLGGHTNSA 226
L + +GH ++ W PG C + I +W + W GHT +
Sbjct: 7 LQTLTGHAGRVWSAAW---HPGGKLFASCGEDKTIRVWNKSDTDRWVAQTVLTDGHTRTI 63
Query: 227 EDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPG 286
+L WS L + +A +KK G+ T GH E ++ WS +
Sbjct: 64 RELAWSCCGHYLASASFDTTVAVWDKKSGEFECNAT-----LEGHDNEVKSVTWSRSG-N 117
Query: 287 VLATGDCKRNIHIWTPREAGAWQVDQKPLV----GHTNSVEDLQWSPGEKRVLASCSVDL 342
+LAT +++ IW A Q D+ V GHT V+ + W P E +LAS S D
Sbjct: 118 LLATCSRDKSVWIWEIHHAPD-QEDEYECVAVLNGHTQDVKKVCWHPQED-LLASASYDN 175
Query: 343 SIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWD-------- 394
+IR++ + +++ ML +H+S V IS++ T + S +D + VW
Sbjct: 176 TIRMYRQDLADSEWEMLEPLESHSSTVWSISFDATGQRLASCSEDTTVKVWQQYGPDNAL 235
Query: 395 -LRRFKKGS---SVATFK-HHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEI 449
+ +G+ V T +H+ V ++W ++ A+ DD + ++ A DS+
Sbjct: 236 GIPCPDRGTIWKCVCTLSGYHSRSVYDIDWCK-QTGLLATACGDDTVRIFREA--SDSDR 292
Query: 450 EQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSG 493
+ EL ++ + ++ ++ WHP +PG +++ ++ G
Sbjct: 293 NEPTFEL------VVTVEAHSQDANKVAWHPTVPGLLLTASDDG 330
Score = 167 (63.8 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 63/283 (22%), Positives = 119/283 (42%)
Query: 270 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSP 329
GH + WS LA+ + +W +++G ++ + L GH N V+ + WS
Sbjct: 58 GHTRTIRELAWSCCGH-YLASASFDTTVAVWD-KKSGEFECNAT-LEGHDNEVKSVTWSR 114
Query: 330 GEKRVLASCSVDLSIRIWDTRVINTKS----CMLTLPNAHTSDVNVISWNRTEPLIVSGG 385
+LA+CS D S+ IW+ + C+ L N HT DV + W+ E L+ S
Sbjct: 115 SGN-LLATCSRDKSVWIWEIHHAPDQEDEYECVAVL-NGHTQDVKKVCWHPQEDLLASAS 172
Query: 386 DDGCIHVW--DLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAV 443
D I ++ DL + + + H++ V ++ + T AS D + +W
Sbjct: 173 YDNTIRMYRQDLAD-SEWEMLEPLESHSSTVWSISFDAT-GQRLASCSEDTTVKVWQ-QY 229
Query: 444 ERDSEIE---QREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTI 500
D+ + + L H + + ++ W Q + + IFR
Sbjct: 230 GPDNALGIPCPDRGTIWKCVCTLSGYH--SRSVYDIDWCKQTGLLATACGDDTVRIFREA 287
Query: 501 SDL----PS-QLLF-IHLGQKEIKELHWHPQLPGTIISTANSG 537
SD P+ +L+ + ++ ++ WHP +PG +++ ++ G
Sbjct: 288 SDSDRNEPTFELVVTVEAHSQDANKVAWHPTVPGLLLTASDDG 330
>TAIR|locus:2150788 [details] [associations]
symbol:AT5G08390 "AT5G08390" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0010090
"trichome morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0042546 "cell
wall biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0080008
GO:GO:0008352 PANTHER:PTHR19845 OMA:YWERNDI IPI:IPI00533677
RefSeq:NP_568194.2 UniGene:At.10141 UniGene:At.72630
ProteinModelPortal:F4KB17 SMR:F4KB17 PRIDE:F4KB17
EnsemblPlants:AT5G08390.1 GeneID:830737 KEGG:ath:AT5G08390
Uniprot:F4KB17
Length = 839
Score = 211 (79.3 bits), Expect = 2.5e-13, P = 2.5e-13
Identities = 57/178 (32%), Positives = 89/178 (50%)
Query: 265 LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVED 324
+ S GH + ++ + ++E G++A G I +W EA + L GH ++
Sbjct: 52 ILSLYGHSSGIDSVTFDASE-GLVAAGAASGTIKLWDLEEAKV----VRTLTGHRSNCVS 106
Query: 325 LQWSP-GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVS 383
+ + P GE AS S+D +++IWD R K C+ T HT VNV+ + IVS
Sbjct: 107 VNFHPFGE--FFASGSLDTNLKIWDIR---KKGCIHTY-KGHTRGVNVLRFTPDGRWIVS 160
Query: 384 GGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDL 441
GG+D + VWDL G + FK H + ++++HP E A+G AD + WDL
Sbjct: 161 GGEDNVVKVWDLTA---GKLLHEFKSHEGKIQSLDFHPHEF-LLATGSADKTVKFWDL 214
Score = 145 (56.1 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 36/126 (28%), Positives = 62/126 (49%)
Query: 316 VGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWN 375
V H+ +V L+ RVL + D + +W I + +L+L H+S ++ ++++
Sbjct: 13 VAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLW---AIGKPNAILSL-YGHSSGIDSVTFD 68
Query: 376 RTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQ 435
+E L+ +G G I +WDL K V T H + +V +HP FASG D
Sbjct: 69 ASEGLVAAGAASGTIKLWDLEEAKV---VRTLTGHRSNCVSVNFHPF-GEFFASGSLDTN 124
Query: 436 IALWDL 441
+ +WD+
Sbjct: 125 LKIWDI 130
Score = 54 (24.1 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 23/93 (24%), Positives = 38/93 (40%)
Query: 673 ATGDCKRNIHIWTPREAGAWSVYL-YTNRFGVLA-TGDCKRNIHIWTPREAGAWQVDQKP 730
A+G N+ IW R+ G Y +T VL T D + + W +
Sbjct: 117 ASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGK 176
Query: 731 LV----GHTNSVEDLQWSPGEKRVLASCSVDRS 759
L+ H ++ L + P E +LA+ S D++
Sbjct: 177 LLHEFKSHEGKIQSLDFHPHEF-LLATGSADKT 208
Score = 50 (22.7 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 32/129 (24%), Positives = 51/129 (39%)
Query: 649 LFSFSGHLTEG-----FAMD--W--SSTEPGVLATGDCKRN--IHIWTPREAGAWSVYLY 697
+ ++ GH T G F D W S E V+ D +H + E S+ +
Sbjct: 136 IHTYKGH-TRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLDFH 194
Query: 698 TNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVG----HTNSVEDLQWSPGEKRVLAS 753
+ F +LATG + + W ++ L+G T V L ++P K VL
Sbjct: 195 PHEF-LLATGSADKTVKFW--------DLETFELIGSGGTETTGVRCLTFNPDGKSVL-- 243
Query: 754 CSVDRSNRI 762
C + S +I
Sbjct: 244 CGLQESLKI 252
>DICTYBASE|DDB_G0271788 [details] [associations]
symbol:wdr57 "putative U5 small nuclear
ribonucleoprotein" species:44689 "Dictyostelium discoideum"
[GO:0005681 "spliceosomal complex" evidence=IEA;ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0271788
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR GO:GO:0005681 EMBL:AAFI02000006
GO:GO:0000398 KO:K12857 OMA:HAGSVNE HSSP:P61964 RefSeq:XP_645454.1
ProteinModelPortal:Q55AR8 STRING:Q55AR8 EnsemblProtists:DDB0233518
GeneID:8618082 KEGG:ddi:DDB_G0271788 Uniprot:Q55AR8
Length = 355
Score = 173 (66.0 bits), Expect = 3.2e-13, Sum P(2) = 3.2e-13
Identities = 53/184 (28%), Positives = 86/184 (46%)
Query: 264 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVE 323
P+ GH E ++ ++S LA+G + I +W G ++ L GH ++
Sbjct: 54 PIMQLIGHKGEIYSCKFNSYGTA-LASGGSDKEIFLWNVY--GEC-INYSVLKGHKGTIL 109
Query: 324 DLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVN-VISWNRTEPLIV 382
+L WS + +C+ D SI +WD+ K ++ H+ VN R PL+
Sbjct: 110 ELHWSTDSNEIYTACT-DKSIGVWDSN----KGELIKRIREHSGVVNSCCPARRGPPLVA 164
Query: 383 SGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442
SG DD ++D R KGS+ F+H PVT+V + S +GG D+ I +WD+
Sbjct: 165 SGSDDRSARIFDTR--SKGST-HLFQHKY-PVTSVCFSDA-SDQLITGGIDNVIRVWDIR 219
Query: 443 VERD 446
+ D
Sbjct: 220 NQED 223
Score = 122 (48.0 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 56/278 (20%), Positives = 110/278 (39%)
Query: 168 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAE 227
P+ GH E ++ ++S LA+G + I +W G ++ L GH +
Sbjct: 54 PIMQLIGHKGEIYSCKFNSYGTA-LASGGSDKEIFLWNVY--GEC-INYSVLKGHKGTIL 109
Query: 228 DLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGV 287
+L WS + T + + +G+ + SG + + P +
Sbjct: 110 ELHWSTDSNEIYTACTDKSIGVWDSNKGE----LIKRIREHSGVVNSCCP---ARRGPPL 162
Query: 288 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIW 347
+A+G R+ I+ R G+ + Q H V + +S +++ +D IR+W
Sbjct: 163 VASGSDDRSARIFDTRSKGSTHLFQ-----HKYPVTSVCFSDASDQLITG-GIDNVIRVW 216
Query: 348 DTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGS-SVAT 406
D R N + + TL + H + S ++ ++S D +WD+R + + ++ T
Sbjct: 217 DIR--NQEDPLYTLAS-HQDTITSTSVSKDGAYLLSNSMDNSCKIWDIRPYAPPNRNIKT 273
Query: 407 FK----HHTAPVTTVEWHPTESSTFASGGADDQIALWD 440
F + + W + G +D Q+ +WD
Sbjct: 274 FNGAQNNFEKNLIKSSWS-IDGRRIGCGSSDRQVYIWD 310
Score = 75 (31.5 bits), Expect = 3.2e-13, Sum P(2) = 3.2e-13
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 704 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRIG 763
+ G R ++IW + Q+ Q L GH+ +V ++ + P E ++ASCS D++ +G
Sbjct: 297 IGCGSSDRQVYIW---DTNTKQL-QYCLPGHSGTVNEVTFHPNEP-IIASCSSDKTIYLG 351
>UNIPROTKB|B4P7Q3 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7245 "Drosophila yakuba"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CM000158 OrthoDB:EOG45DV4X RefSeq:XP_002091367.1
ProteinModelPortal:B4P7Q3 STRING:B4P7Q3 EnsemblMetazoa:FBtr0258798
GeneID:6530451 KEGG:dya:Dyak_GE12280 FlyBase:FBgn0230036
Uniprot:B4P7Q3
Length = 335
Score = 191 (72.3 bits), Expect = 4.9e-13, Sum P(2) = 4.9e-13
Identities = 83/340 (24%), Positives = 143/340 (42%)
Query: 171 SFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQ 230
+ GH + + W + G+ K I IW+ W GH + ++Q
Sbjct: 9 TLQGHKGRIWGVAWHPKGNVFASCGEDKA-IRIWS-LTGNTWSTKTILSDGHKRTIREIQ 66
Query: 231 WSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLAT 290
WS L + A +K G+ T GH E ++ WS + G+LAT
Sbjct: 67 WSPCGQYLASASFDATTAIWSKSSGEFECNAT-----LEGHENEVKSVSWSRSG-GLLAT 120
Query: 291 GDCKRNIHIWTPREAGAWQVDQKPLVG-HTNSVEDLQWSPGEKRVLASCSVDLSIRIWDT 349
C R+ +W AG + + ++ HT V+ + W P K +LAS S D +I+++
Sbjct: 121 --CSRDKSVWIWEVAGDDEFECAAVLNSHTQDVKRVVWHP-TKEILASASYDNTIKMYAE 177
Query: 350 RVI-NTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSS--VAT 406
I N C TL +HTS + I ++ +VS DD + +W R + G+S VAT
Sbjct: 178 EPIDNDWDCTATL-TSHTSTIWGIDFDADGERLVSCSDDTTVKIW--RAYHPGNSAGVAT 234
Query: 407 ------FK-------HHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQRE 453
+K H+ + V W + A+ DD I ++ + S+ + E
Sbjct: 235 PDQQTVWKCVCTLSGQHSRAIYDVSWCKL-TGLIATACGDDGIRIF----KETSDSKPDE 289
Query: 454 AELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSG 493
+ L ++ H +++ + W+P + G +IS ++ G
Sbjct: 290 PTFEQLTAEES-AH--DQDVNSVQWNPVVAGQLISCSDDG 326
Score = 181 (68.8 bits), Expect = 7.7e-12, Sum P(2) = 7.7e-12
Identities = 68/280 (24%), Positives = 122/280 (43%)
Query: 270 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSP 329
GH + WS LA+ IW+ + +G ++ + L GH N V+ + WS
Sbjct: 57 GHKRTIREIQWSPCGQ-YLASASFDATTAIWS-KSSGEFECNAT-LEGHENEVKSVSWSR 113
Query: 330 GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGC 389
+LA+CS D S+ IW+ + C L N+HT DV + W+ T+ ++ S D
Sbjct: 114 SGG-LLATCSRDKSVWIWEVAGDDEFECAAVL-NSHTQDVKRVVWHPTKEILASASYDNT 171
Query: 390 IHVWDLRRFKKG-SSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSE 448
I ++ AT HT+ + +++ + S D + +W A +
Sbjct: 172 IKMYAEEPIDNDWDCTATLTSHTSTIWGIDFD-ADGERLVSCSDDTTVKIWR-AYHPGNS 229
Query: 449 IEQREAELKDLPSQLLFIHLGQ--KEIKELHWHPQLPGTIISTA--NSGFNIFRTISDL- 503
+ + + + + GQ + I ++ W +L G +I+TA + G IF+ SD
Sbjct: 230 AGVATPDQQTVWKCVCTLS-GQHSRAIYDVSWC-KLTG-LIATACGDDGIRIFKETSDSK 286
Query: 504 PSQLLFIHLGQKE------IKELHWHPQLPGTIISTANSG 537
P + F L +E + + W+P + G +IS ++ G
Sbjct: 287 PDEPTFEQLTAEESAHDQDVNSVQWNPVVAGQLISCSDDG 326
Score = 51 (23.0 bits), Expect = 4.9e-13, Sum P(2) = 4.9e-13
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 734 HTNSVEDLQWSPGEKRVLASCSVDRSNRI 762
H V +QW+P L SCS D + +I
Sbjct: 302 HDQDVNSVQWNPVVAGQLISCSDDGTIKI 330
>UNIPROTKB|G4MRA1 [details] [associations]
symbol:MGG_04693 "WD repeat-containing protein 57"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001231
KO:K12857 RefSeq:XP_003710838.1 ProteinModelPortal:G4MRA1
EnsemblFungi:MGG_04693T0 GeneID:2678191 KEGG:mgr:MGG_04693
Uniprot:G4MRA1
Length = 352
Score = 179 (68.1 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 56/179 (31%), Positives = 85/179 (47%)
Query: 264 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVE 323
PL SGH E F ++S +A+G R+I +W R G + + L GH ++
Sbjct: 52 PLMELSGHSGEIFCAKFNSAGQ-YIASGSMDRSILLW--RANGDCE-NYGILSGHRGAIL 107
Query: 324 DLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWN-RTEPLIV 382
DLQWS + ++ S S D+ + WD T + H +N + + R E ++
Sbjct: 108 DLQWSR-DSDIIFSASADMHLASWDL----TTGERIRRYVGHEEVINSLDISKRGEEILF 162
Query: 383 SGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDL 441
SG DDG I +WD R KK + A + PVT V + + SGG D+ I +WD+
Sbjct: 163 SGSDDGTIGIWDPR--KKHA--ADYIESDFPVTAVAISEAGNEIY-SGGIDNDIKVWDV 216
Score = 104 (41.7 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 44/173 (25%), Positives = 72/173 (41%)
Query: 269 SGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWS 328
SGH + WS + ++ + ++ W G ++ + VGH + L S
Sbjct: 100 SGHRGAILDLQWSR-DSDIIFSASADMHLASWD-LTTGE-RI--RRYVGHEEVINSLDIS 154
Query: 329 PGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDG 388
+ +L S S D +I IWD R + + + V ++ + I SGG D
Sbjct: 155 KRGEEILFSGSDDGTIGIWDPRKKHAADYIES-----DFPVTAVAISEAGNEIYSGGIDN 209
Query: 389 CIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDL 441
I VWD+R KK + V H +TT++ P +S + S D WD+
Sbjct: 210 DIKVWDVR--KK-AVVYNMAGHRDTITTLKVSP-DSQSLLSYAMDSTARTWDI 258
Score = 103 (41.3 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 45/183 (24%), Positives = 74/183 (40%)
Query: 168 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAE 227
PL SGH E F ++S +A+G R+I +W R G + + L GH +
Sbjct: 52 PLMELSGHSGEIFCAKFNSAGQ-YIASGSMDRSILLW--RANGDCE-NYGILSGHRGAIL 107
Query: 228 DLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGV 287
DLQWS + + LA + G+ + + GH ++D S +
Sbjct: 108 DLQWSRDSDIIFSASADMHLASWDLTTGER-------IRRYVGHEEVINSLDISKRGEEI 160
Query: 288 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIW 347
L +G I IW PR+ A + ++ + G + + S +D I++W
Sbjct: 161 LFSGSDDGTIGIWDPRKKHAADYIESDFPVTAVAISEA----GNE--IYSGGIDNDIKVW 214
Query: 348 DTR 350
D R
Sbjct: 215 DVR 217
Score = 62 (26.9 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 19/63 (30%), Positives = 34/63 (53%)
Query: 704 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRIG 763
+A G + IW+ E G ++ K L GH +V +++SPG + ++ S S D++ +G
Sbjct: 294 VAMGAADGTVVIWS-NETG--KLTYK-LPGHKAAVNCVEFSPGTEPLILSGSSDKTLLVG 349
Query: 764 ARR 766
R
Sbjct: 350 ELR 352
>UNIPROTKB|B3MC74 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7217 "Drosophila ananassae"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CH902619 OrthoDB:EOG45DV4X RefSeq:XP_001959352.1
ProteinModelPortal:B3MC74 STRING:B3MC74 EnsemblMetazoa:FBtr0116785
GeneID:6494943 KEGG:dan:Dana_GF12085 FlyBase:FBgn0089124
InParanoid:B3MC74 Uniprot:B3MC74
Length = 335
Score = 189 (71.6 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 79/338 (23%), Positives = 145/338 (42%)
Query: 171 SFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQ 230
+ GH + + W + G+ K I IW+ W GH + +++
Sbjct: 9 TLQGHKGRIWGVAWHPKGNVFASCGEDKA-IRIWS-LNGNTWTTKTILSDGHKRTIREIR 66
Query: 231 WSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLAT 290
WS L + A +K G+ T GH E ++ WS + G+LAT
Sbjct: 67 WSPCGQYLASASFDGTTAIWSKSSGEFECNAT-----LEGHENEVKSVSWSRSG-GLLAT 120
Query: 291 GDCKRNIHIWTPREAGAWQVDQKPLVG-HTNSVEDLQWSPGEKRVLASCSVDLSIRIWDT 349
C R+ +W AG + + ++ HT V+ + W P K +LAS S D +I+++
Sbjct: 121 --CSRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVWHP-TKELLASASYDNTIKMFAE 177
Query: 350 RVINTK-SCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVAT-- 406
+++ C+ TL ++HTS V I ++ T +VS DD + +W + VAT
Sbjct: 178 DALDSDWDCVATL-SSHTSTVWSIDFDATGERLVSCSDDTSLKIWQAYHPGNDAGVATPD 236
Query: 407 ----FK-------HHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAE 455
+K H+ + V W ++ A+ DD I ++ + S+ ++ E
Sbjct: 237 KQTVWKCVCTISGQHSRAIYDVSWCKL-TNLIATACGDDGIRIF----KETSDSKRDEPT 291
Query: 456 LKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSG 493
+ L ++ H +++ + W+P + G +IS ++ G
Sbjct: 292 FEQLTAEE-GAH--DQDVNSVEWNPVVEGQLISCSDDG 326
Score = 180 (68.4 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 71/280 (25%), Positives = 124/280 (44%)
Query: 270 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSP 329
GH + WS LA+ IW+ + +G ++ + L GH N V+ + WS
Sbjct: 57 GHKRTIREIRWSPCGQ-YLASASFDGTTAIWS-KSSGEFECNAT-LEGHENEVKSVSWSR 113
Query: 330 GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGC 389
+LA+CS D S+ IW+ + C L N HT DV + W+ T+ L+ S D
Sbjct: 114 SGG-LLATCSRDKSVWIWEVAGDDEFECAAVL-NPHTQDVKRVVWHPTKELLASASYDNT 171
Query: 390 IHVWDLRRFKKG-SSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSE 448
I ++ VAT HT+ V ++++ T S D + +W A ++
Sbjct: 172 IKMFAEDALDSDWDCVATLSSHTSTVWSIDFDAT-GERLVSCSDDTSLKIWQ-AYHPGND 229
Query: 449 IEQREAELKDLPSQLLFIHLGQ--KEIKELHWHPQLPGTIISTA--NSGFNIFRTISDL- 503
+ + + + I GQ + I ++ W +L +I+TA + G IF+ SD
Sbjct: 230 AGVATPDKQTVWKCVCTIS-GQHSRAIYDVSWC-KLTN-LIATACGDDGIRIFKETSDSK 286
Query: 504 ---PS-QLLFIHLG--QKEIKELHWHPQLPGTIISTANSG 537
P+ + L G +++ + W+P + G +IS ++ G
Sbjct: 287 RDEPTFEQLTAEEGAHDQDVNSVEWNPVVEGQLISCSDDG 326
Score = 49 (22.3 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 734 HTNSVEDLQWSPGEKRVLASCSVDRSNRI 762
H V ++W+P + L SCS D + ++
Sbjct: 302 HDQDVNSVEWNPVVEGQLISCSDDGTIKV 330
>SGD|S000000399 [details] [associations]
symbol:MSI1 "Subunit of chromatin assembly factor I (CAF-1)"
species:4932 "Saccharomyces cerevisiae" [GO:0033186 "CAF-1 complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005737
"cytoplasm" evidence=IEA;IDA] [GO:0006335 "DNA
replication-dependent nucleosome assembly" evidence=IDA]
[GO:0042393 "histone binding" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000000399 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 EMBL:BK006936 EMBL:Z21487
GO:GO:0006335 GO:GO:0033186 InterPro:IPR022052 Pfam:PF12265
HOGENOM:HOG000160330 EMBL:M27300 EMBL:Z36064 EMBL:AY692834
PIR:S07865 RefSeq:NP_009754.1 ProteinModelPortal:P13712 SMR:P13712
DIP:DIP-338N IntAct:P13712 MINT:MINT-386252 STRING:P13712
PaxDb:P13712 PeptideAtlas:P13712 EnsemblFungi:YBR195C GeneID:852494
KEGG:sce:YBR195C CYGD:YBR195c OMA:MPDVTKT OrthoDB:EOG44TSHP
NextBio:971486 Genevestigator:P13712 GermOnline:YBR195C
Uniprot:P13712
Length = 422
Score = 185 (70.2 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 46/182 (25%), Positives = 87/182 (47%)
Query: 269 SGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQ-VDQKPLVGHTN---SVED 324
S + E ++ W+ + +L + + +W ++ + PLV + +V D
Sbjct: 197 SADINEATSLAWNLQQEALLLSSHSNGQVQVWDIKQYSHENPIIDLPLVSINSDGTAVND 256
Query: 325 LQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSG 384
+ W P + A+C+ ++ + D R K + + H VN +N LI++
Sbjct: 257 VTWMPTHDSLFAACTEGNAVSLLDLRTKKEK--LQSNREKHDGGVNSCRFNYKNSLILAS 314
Query: 385 GD-DGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIA-LWDLA 442
D +G +++WD+R K S +AT +H T+ V+T+EW P + A+ G +D + LWD +
Sbjct: 315 ADSNGRLNLWDIRNMNK-SPIATMEHGTS-VSTLEWSPNFDTVLATAGQEDGLVKLWDTS 372
Query: 443 VE 444
E
Sbjct: 373 CE 374
Score = 129 (50.5 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 35/113 (30%), Positives = 57/113 (50%)
Query: 287 VLATGDCKRNIHIWTPREAGAWQVDQKPL--VGHTNSVEDLQWSPGEKRVLASCSV-DLS 343
+LA+ D +++W R +++ P+ + H SV L+WSP VLA+ D
Sbjct: 311 ILASADSNGRLNLWDIRN-----MNKSPIATMEHGTSVSTLEWSPNFDTVLATAGQEDGL 365
Query: 344 IRIWDTRVINTKSCMLTL--PNAHTSDVNVISWNRTEP-LIVSGGDDGCIHVW 393
+++WDT SC T+ H VN ISW+ +P L+ S +D +H+W
Sbjct: 366 VKLWDT------SCEETIFTHGGHMLGVNDISWDAHDPWLMCSVANDNSVHIW 412
Score = 102 (41.0 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 27/109 (24%), Positives = 51/109 (46%)
Query: 351 VINTKSCMLTLPNAHTSDVNVISWN-RTEPLIVSGGDDGCIHVWDLRRFKKGSSV----- 404
VI M T +A ++ ++WN + E L++S +G + VWD++++ + +
Sbjct: 186 VIQDVEAMDT-SSADINEATSLAWNLQQEALLLSSHSNGQVQVWDIKQYSHENPIIDLPL 244
Query: 405 ATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQRE 453
+ V V W PT S FA+ + ++L DL +++ RE
Sbjct: 245 VSINSDGTAVNDVTWMPTHDSLFAACTEGNAVSLLDLRTKKEKLQSNRE 293
Score = 66 (28.3 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 18/59 (30%), Positives = 30/59 (50%)
Query: 697 YTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPL--VGHTNSVEDLQWSPGEKRVLAS 753
Y N +LA+ D +++W R +++ P+ + H SV L+WSP VLA+
Sbjct: 306 YKNSL-ILASADSNGRLNLWDIRN-----MNKSPIATMEHGTSVSTLEWSPNFDTVLAT 358
Score = 59 (25.8 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 9/38 (23%), Positives = 20/38 (52%)
Query: 649 LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTP 686
+F+ GH+ + W + +P ++ + ++HIW P
Sbjct: 377 IFTHGGHMLGVNDISWDAHDPWLMCSVANDNSVHIWKP 414
Score = 43 (20.2 bits), Expect = 7.0e-11, Sum P(2) = 7.0e-11
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 733 GHTNSVEDLQWSPGEKRVLASCSVDRSNRI 762
GH V D+ W + ++ CSV N +
Sbjct: 382 GHMLGVNDISWDAHDPWLM--CSVANDNSV 409
>UNIPROTKB|B4MY77 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7260 "Drosophila willistoni"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 OMA:SWKCVCT OrthoDB:EOG45DV4X EMBL:CH963894
RefSeq:XP_002066080.1 ProteinModelPortal:B4MY77 STRING:B4MY77
EnsemblMetazoa:FBtr0252775 GeneID:6643305 KEGG:dwi:Dwil_GK22124
FlyBase:FBgn0224109 InParanoid:B4MY77 Uniprot:B4MY77
Length = 335
Score = 189 (71.6 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 79/340 (23%), Positives = 147/340 (43%)
Query: 171 SFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQ 230
+ GH + + W + G+ K I IW+ +W GH + +++
Sbjct: 9 TLQGHKGRIWGVAWHPKGNTFASCGEDKA-IRIWS-LSGNSWSTKTILSDGHKRTIREIR 66
Query: 231 WSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLAT 290
WS L + A +K G+ T GH E ++ WS + G+LAT
Sbjct: 67 WSPCGQYLASASFDATTAIWSKSSGEFECNAT-----LEGHENEVKSVSWSKSG-GLLAT 120
Query: 291 GDCKRNIHIWTPREAGAWQVDQKPLVG-HTNSVEDLQWSPGEKRVLASCSVDLSIRIWDT 349
C R+ +W AG + + ++ HT V+ + W P K +LAS S D +I+++
Sbjct: 121 --CSRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVWHP-TKEILASASYDNTIKMFAE 177
Query: 350 RVINTK-SCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSS--VAT 406
+++ C TL ++HTS V I ++ +VS DD + +W R + G+ VAT
Sbjct: 178 SALDSDWDCTATL-SSHTSTVWSIDFDADGERLVSCSDDTTLKIW--RAYHPGNDAGVAT 234
Query: 407 ------FK-------HHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQRE 453
+K H+ + V W + A+ DD I ++ + S+ ++ E
Sbjct: 235 PDKQTVWKCVCTLSGQHSRAIYDVSWCKL-TGLIATACGDDGIRIF----KESSDSKRDE 289
Query: 454 AELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSG 493
+ + ++ H ++++ + W+P + G +IS ++ G
Sbjct: 290 PTFEQVTAEES-AH--EQDVNSVEWNPVMAGQLISCSDDG 326
Score = 173 (66.0 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 68/280 (24%), Positives = 121/280 (43%)
Query: 270 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSP 329
GH + WS LA+ IW+ + +G ++ + L GH N V+ + WS
Sbjct: 57 GHKRTIREIRWSPCGQ-YLASASFDATTAIWS-KSSGEFECNAT-LEGHENEVKSVSWSK 113
Query: 330 GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGC 389
+LA+CS D S+ IW+ + C L N HT DV + W+ T+ ++ S D
Sbjct: 114 SGG-LLATCSRDKSVWIWEVAGDDEFECAAVL-NPHTQDVKRVVWHPTKEILASASYDNT 171
Query: 390 IHVWDLRRFKKG-SSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSE 448
I ++ AT HT+ V ++++ + S D + +W A ++
Sbjct: 172 IKMFAESALDSDWDCTATLSSHTSTVWSIDFD-ADGERLVSCSDDTTLKIWR-AYHPGND 229
Query: 449 IEQREAELKDLPSQLLFIHLGQ--KEIKELHWHPQLPGTIISTA--NSGFNIFRTISDLP 504
+ K + + GQ + I ++ W +L G +I+TA + G IF+ SD
Sbjct: 230 AGVATPD-KQTVWKCVCTLSGQHSRAIYDVSWC-KLTG-LIATACGDDGIRIFKESSDSK 286
Query: 505 -SQLLFIHLGQKE------IKELHWHPQLPGTIISTANSG 537
+ F + +E + + W+P + G +IS ++ G
Sbjct: 287 RDEPTFEQVTAEESAHEQDVNSVEWNPVMAGQLISCSDDG 326
Score = 48 (22.0 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 734 HTNSVEDLQWSPGEKRVLASCSVDRSNRI 762
H V ++W+P L SCS D + +I
Sbjct: 302 HEQDVNSVEWNPVMAGQLISCSDDGTIKI 330
>UNIPROTKB|B3NQR5 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7220 "Drosophila erecta"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH954179 OrthoDB:EOG45DV4X RefSeq:XP_001975575.1
ProteinModelPortal:B3NQR5 EnsemblMetazoa:FBtr0142445 GeneID:6549053
KEGG:der:Dere_GG22391 FlyBase:FBgn0114563 Uniprot:B3NQR5
Length = 335
Score = 186 (70.5 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 81/338 (23%), Positives = 140/338 (41%)
Query: 171 SFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQ 230
+ GH + + W + G+ K I IW+ W GH + +++
Sbjct: 9 TLQGHKGRIWGVAWHPKGNVFASCGEDKA-IRIWS-LTGSTWSTKTILSDGHKRTIREIR 66
Query: 231 WSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLAT 290
WS L + A +K G+ T GH E ++ WS + G+LAT
Sbjct: 67 WSPCGQYLASASFDATTAIWSKSSGEFECNAT-----LEGHENEVKSVSWSRSG-GLLAT 120
Query: 291 GDCKRNIHIWTPREAGAWQVDQKPLVG-HTNSVEDLQWSPGEKRVLASCSVDLSIRIW-D 348
C R+ +W AG + + ++ HT V+ + W P K VLAS S D +I+++ +
Sbjct: 121 --CSRDKSVWIWEVAGDDEFECAAVLNSHTQDVKRVVWHP-TKEVLASASYDNTIKMYAE 177
Query: 349 TRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVAT-- 406
V N C TL +HTS + I ++ +VS DD I +W + VAT
Sbjct: 178 DPVDNDWDCTATL-TSHTSTIWGIDFDADGERLVSCSDDTTIKIWKAYHPGNSAGVATPD 236
Query: 407 ----FK-------HHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAE 455
+K H+ + V W + A+ DD I ++ + S+ + E
Sbjct: 237 QQTVWKCVCTLSGQHSRAIYDVSWCKL-TGLIATACGDDGIRIF----KETSDSKPDEPT 291
Query: 456 LKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSG 493
+ L ++ H +++ + W+P + G +IS ++ G
Sbjct: 292 FEQLTAEE-GAH--DQDVNSVQWNPVVAGQLISCSDDG 326
Score = 177 (67.4 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 69/280 (24%), Positives = 122/280 (43%)
Query: 270 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSP 329
GH + WS LA+ IW+ + +G ++ + L GH N V+ + WS
Sbjct: 57 GHKRTIREIRWSPCGQ-YLASASFDATTAIWS-KSSGEFECNAT-LEGHENEVKSVSWSR 113
Query: 330 GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGC 389
+LA+CS D S+ IW+ + C L N+HT DV + W+ T+ ++ S D
Sbjct: 114 SGG-LLATCSRDKSVWIWEVAGDDEFECAAVL-NSHTQDVKRVVWHPTKEVLASASYDNT 171
Query: 390 IHVWDLRRFKKG-SSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSE 448
I ++ AT HT+ + +++ + S D I +W A +
Sbjct: 172 IKMYAEDPVDNDWDCTATLTSHTSTIWGIDFD-ADGERLVSCSDDTTIKIWK-AYHPGNS 229
Query: 449 IEQREAELKDLPSQLLFIHLGQ--KEIKELHWHPQLPGTIISTA--NSGFNIFRTISDL- 503
+ + + + + GQ + I ++ W +L G +I+TA + G IF+ SD
Sbjct: 230 AGVATPDQQTVWKCVCTLS-GQHSRAIYDVSWC-KLTG-LIATACGDDGIRIFKETSDSK 286
Query: 504 PSQLLFIHLGQKE------IKELHWHPQLPGTIISTANSG 537
P + F L +E + + W+P + G +IS ++ G
Sbjct: 287 PDEPTFEQLTAEEGAHDQDVNSVQWNPVVAGQLISCSDDG 326
Score = 51 (23.0 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 734 HTNSVEDLQWSPGEKRVLASCSVDRSNRI 762
H V +QW+P L SCS D + +I
Sbjct: 302 HDQDVNSVQWNPVVAGQLISCSDDGTIKI 330
>UNIPROTKB|Q9I8G9 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9031
"Gallus gallus" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0030308
"negative regulation of cell growth" evidence=IEA] [GO:0070370
"cellular heat acclimation" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0016581 "NuRD complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 OMA:DGFLLHV HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:AF279275 IPI:IPI00594478
PIR:JC7558 RefSeq:NP_990001.1 UniGene:Gga.202
ProteinModelPortal:Q9I8G9 SMR:Q9I8G9 STRING:Q9I8G9 PRIDE:Q9I8G9
Ensembl:ENSGALT00000026698 GeneID:395390 KEGG:gga:395390
InParanoid:Q9I8G9 NextBio:20815474 Uniprot:Q9I8G9
Length = 424
Score = 197 (74.4 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 61/258 (23%), Positives = 105/258 (40%)
Query: 160 KGPGIPTP-----PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWT----PREAG 210
K P P P P GH EG+ + W+S G L + + +W P+E
Sbjct: 154 KHPSKPDPSGECNPDLRLRGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGK 213
Query: 211 AWQVDQKPL-GGHTNSAEDLQWSDLKTAL-QTVDDPFQLAEHNKKRGKGPGIPTPPLFSF 268
VD K + GH+ ED+ W L +L +V D +L + + + P S
Sbjct: 214 I--VDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNT----TSKPSHSV 267
Query: 269 SGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWS 328
H E + ++ +LATG + + +W R ++ H + + + WS
Sbjct: 268 DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL---KLKLHSFESHKDEIFQVHWS 324
Query: 329 PGEKRVLASCSVDLSIRIWDTRVINTKSC----------MLTLPNAHTSDVNVISWNRTE 378
P + +LAS D + +WD I + +L + HT+ ++ SWN E
Sbjct: 325 PHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNE 384
Query: 379 PLIV-SGGDDGCIHVWDL 395
P ++ S +D + +W +
Sbjct: 385 PWVICSVSEDNIMQIWQM 402
Score = 178 (67.7 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 90/364 (24%), Positives = 150/364 (41%)
Query: 219 LGGHTNSAEDLQWSDLKTALQTV--DDPFQLAEHNKKRGK--GPGIPTPPLFSFS--GHL 272
LG HT+ ++ L A + DD F ++++ ++G+ G G T + + H
Sbjct: 67 LGTHTSDEQN----HLVVARVQIPNDDQFDTSQYDSEKGEFGGFGSVTGKIETEIKINHE 122
Query: 273 TEGFAMDWSSTEPGVLATGDCKRNI-------HIWTPREAGAWQVDQKPLVGHTNSVEDL 325
E + P ++AT ++ H P +G D + L GH L
Sbjct: 123 GEVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLR-LRGHQKEGYGL 181
Query: 326 QWSPGEKRVLASCSVDLSIRIWDT-------RVINTKSCMLTLPNAHTSDVNVISWNRT- 377
W+ K L S S D ++ +WD ++++ K+ H++ V ++W+
Sbjct: 182 SWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIF----TGHSAVVEDVAWHLLH 237
Query: 378 EPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIA 437
E L S DD + +WD R + HTA V + ++P A+G AD +A
Sbjct: 238 ESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVA 297
Query: 438 LWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSG--FN 495
LWDL R +LK L S + EI ++HW P TI++++ + N
Sbjct: 298 LWDL----------RNLKLK-LHS----FESHKDEIFQVHWSPHNE-TILASSGTDRRLN 341
Query: 496 IF-----------RTISDLPSQLLFIHLGQK-EIKELHWHPQLPGTIISTANSGFNIFRT 543
++ D P +LLFIH G +I + W+P P I S + NI +
Sbjct: 342 VWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED--NIMQI 399
Query: 544 ISMS 547
M+
Sbjct: 400 WQMA 403
>UNIPROTKB|Q5BJ90 [details] [associations]
symbol:wdr12 "Ribosome biogenesis protein wdr12"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000463
"maturation of LSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS] [GO:0000466
"maturation of 5.8S rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS] [GO:0005654
"nucleoplasm" evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS]
[GO:0008283 "cell proliferation" evidence=ISS] [GO:0030687
"preribosome, large subunit precursor" evidence=ISS] [GO:0070545
"PeBoW complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030687 GO:GO:0070545
GO:GO:0000463 GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154
KO:K14863 HOGENOM:HOG000264464 HAMAP:MF_03029 CTD:55759
GeneTree:ENSGT00640000091456 HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM
EMBL:BC091577 RefSeq:NP_001025628.1 UniGene:Str.36786 HSSP:Q02793
ProteinModelPortal:Q5BJ90 STRING:Q5BJ90 Ensembl:ENSXETT00000047773
GeneID:595016 KEGG:xtr:595016 Xenbase:XB-GENE-945426 OMA:DNSIGFW
Bgee:Q5BJ90 Uniprot:Q5BJ90
Length = 423
Score = 193 (73.0 bits), Expect = 2.7e-12, Sum P(2) = 2.7e-12
Identities = 80/291 (27%), Positives = 119/291 (40%)
Query: 183 DWSSTEPGV---LATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQW--SDLKTA 237
DW S+ G + TG + IW+ + GHT + +D+ W D +
Sbjct: 102 DWVSSIAGTEEWILTGSYDKTCRIWSLEGKTIMTIT-----GHTEAVKDVTWVKKDSLSC 156
Query: 238 L---QTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHL--TEGFAMDWSSTEPGVLATGD 292
L ++D QL E N +R K L GH + A+D S T+ +G
Sbjct: 157 LLLSASIDQTIQLWEWNTERNK-----IKALHCCRGHAGSVDSIAVDASRTK---FCSGS 208
Query: 293 CKRNIHIWT----------------PREA------GAWQVDQKPLVGHTNSVEDLQWSPG 330
+ + IW+ PR+ G ++ L GH+ +V + WS
Sbjct: 209 WDKMLKIWSAVPSEEEDEYEETSDRPRKKQKTEKMGLTRIPIVTLSGHSEAVSSVLWSDV 268
Query: 331 EKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCI 390
++ + S S D +I+IWD KS TL A N IS++ + SG D I
Sbjct: 269 DE--ICSASWDHNIKIWDVETGTVKS---TL--AGNKVFNCISYSPLSQRLASGSTDRHI 321
Query: 391 HVWDLRRFKKGSSV-ATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWD 440
+WD R K GS V + HT VT+V+W P+ SG D + LWD
Sbjct: 322 RLWDPRS-KDGSLVLCSLTSHTGWVTSVKWSPSHEQQLVSGSLDKLVKLWD 371
Score = 172 (65.6 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 60/210 (28%), Positives = 103/210 (49%)
Query: 231 WSDLKTALQTVDDPFQLAEHNKKRGKGP--GIPTPPLFSFSGHLTEGFAMDWSSTEPGVL 288
WS + + + D+ + ++ +K+ K G+ P+ + SGH ++ WS +
Sbjct: 216 WSAVPS--EEEDEYEETSDRPRKKQKTEKMGLTRIPIVTLSGHSEAVSSVLWSDVDEICS 273
Query: 289 ATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVED-LQWSPGEKRVLASCSVDLSIRIW 347
A+ D NI IW E G + L G N V + + +SP +R LAS S D IR+W
Sbjct: 274 ASWD--HNIKIWDV-ETGTVK---STLAG--NKVFNCISYSPLSQR-LASGSTDRHIRLW 324
Query: 348 DTRVINTKSCMLTLPNAHTSDVNVISWNRT-EPLIVSGGDDGCIHVWDLRRFKKGSSVAT 406
D R + + +L +HT V + W+ + E +VSG D + +WD R K + +
Sbjct: 325 DPRSKDGSLVLCSL-TSHTGWVTSVKWSPSHEQQLVSGSLDKLVKLWDTRSCK--APLYD 381
Query: 407 FKHHTAPVTTVEWHPTESSTFASGGADDQI 436
H+ V +V+W T++ SGG+D+++
Sbjct: 382 LAAHSDKVLSVDW--TDAGLILSGGSDNKL 409
Score = 146 (56.5 bits), Expect = 9.4e-07, P = 9.4e-07
Identities = 36/104 (34%), Positives = 55/104 (52%)
Query: 288 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIW 347
LA+G R+I +W PR V L HT V ++WSP ++ L S S+D +++W
Sbjct: 312 LASGSTDRHIRLWDPRSKDGSLV-LCSLTSHTGWVTSVKWSPSHEQQLVSGSLDKLVKLW 370
Query: 348 DTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIH 391
DTR + K+ + L AH+ V + W LI+SGG D ++
Sbjct: 371 DTR--SCKAPLYDLA-AHSDKVLSVDWTDAG-LILSGGSDNKLY 410
Score = 126 (49.4 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 48/185 (25%), Positives = 80/185 (43%)
Query: 586 HRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGP--G 643
H G ++ + + +G W ++ K IW + + D+ + ++ +K+ K G
Sbjct: 188 HAGSVDSIAVDASRTKFCSGSWDKMLK--IWSAVPS-EEEDEYEETSDRPRKKQKTEKMG 244
Query: 644 IPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSVYLYTNR-FG 702
+ P+ + SGH ++ WS + A+ D NI IW E G L N+ F
Sbjct: 245 LTRIPIVTLSGHSEAVSSVLWSDVDEICSASWD--HNIKIWDV-ETGTVKSTLAGNKVFN 301
Query: 703 V---------LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLAS 753
LA+G R+I +W PR V L HT V ++WSP ++ L S
Sbjct: 302 CISYSPLSQRLASGSTDRHIRLWDPRSKDGSLV-LCSLTSHTGWVTSVKWSPSHEQQLVS 360
Query: 754 CSVDR 758
S+D+
Sbjct: 361 GSLDK 365
Score = 83 (34.3 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 22/72 (30%), Positives = 32/72 (44%)
Query: 377 TEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESST--FASGGADD 434
TE I++G D +W L +G ++ T HT V V W +S + S D
Sbjct: 110 TEEWILTGSYDKTCRIWSL----EGKTIMTITGHTEAVKDVTWVKKDSLSCLLLSASIDQ 165
Query: 435 QIALWDLAVERD 446
I LW+ ER+
Sbjct: 166 TIQLWEWNTERN 177
Score = 48 (22.0 bits), Expect = 2.7e-12, Sum P(2) = 2.7e-12
Identities = 8/35 (22%), Positives = 19/35 (54%)
Query: 648 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIH 682
PL+ + H + ++DW T+ G++ +G ++
Sbjct: 378 PLYDLAAHSDKVLSVDW--TDAGLILSGGSDNKLY 410
>TAIR|locus:2154438 [details] [associations]
symbol:AT5G23430 "AT5G23430" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0005874
GO:GO:0080008 EMBL:AB018110 EMBL:BT002053 IPI:IPI00519668
IPI:IPI00532083 RefSeq:NP_197734.2 RefSeq:NP_851064.1
UniGene:At.45963 ProteinModelPortal:Q8H0T9 SMR:Q8H0T9 IntAct:Q8H0T9
PaxDb:Q8H0T9 PRIDE:Q8H0T9 EnsemblPlants:AT5G23430.1 GeneID:832409
KEGG:ath:AT5G23430 GeneFarm:2999 TAIR:At5g23430
HOGENOM:HOG000008039 InParanoid:Q8H0T9 OMA:DFKCHEG PhylomeDB:Q8H0T9
ProtClustDB:CLSN2717628 Genevestigator:Q8H0T9 GermOnline:AT5G23430
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 Uniprot:Q8H0T9
Length = 837
Score = 201 (75.8 bits), Expect = 3.0e-12, P = 3.0e-12
Identities = 55/178 (30%), Positives = 88/178 (49%)
Query: 265 LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVED 324
+ S GH + ++ + ++E ++A G I +W EA + L GH ++
Sbjct: 52 ILSLYGHSSGIDSVTFDASEV-LVAAGAASGTIKLWDLEEAKI----VRTLTGHRSNCIS 106
Query: 325 LQWSP-GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVS 383
+ + P GE AS S+D +++IWD R K C+ T HT VNV+ + +VS
Sbjct: 107 VDFHPFGE--FFASGSLDTNLKIWDIR---KKGCIHTY-KGHTRGVNVLRFTPDGRWVVS 160
Query: 384 GGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDL 441
GG+D + VWDL G + FK H + ++++HP E A+G AD + WDL
Sbjct: 161 GGEDNIVKVWDLTA---GKLLTEFKSHEGQIQSLDFHPHEF-LLATGSADRTVKFWDL 214
Score = 146 (56.5 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 36/126 (28%), Positives = 63/126 (50%)
Query: 316 VGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWN 375
V H+ +V L+ RVL + D + +W I + +L+L H+S ++ ++++
Sbjct: 13 VAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLW---AIGKPNAILSL-YGHSSGIDSVTFD 68
Query: 376 RTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQ 435
+E L+ +G G I +WDL K V T H + +V++HP FASG D
Sbjct: 69 ASEVLVAAGAASGTIKLWDLEEAK---IVRTLTGHRSNCISVDFHPF-GEFFASGSLDTN 124
Query: 436 IALWDL 441
+ +WD+
Sbjct: 125 LKIWDI 130
Score = 43 (20.2 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 20/74 (27%), Positives = 32/74 (43%)
Query: 693 SVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVG----HTNSVEDLQWSPGEK 748
S+ + + F +LATG R + W ++ L+G T V L ++P K
Sbjct: 190 SLDFHPHEF-LLATGSADRTVKFW--------DLETFELIGSGGPETAGVRCLSFNPDGK 240
Query: 749 RVLASCSVDRSNRI 762
VL C + S +I
Sbjct: 241 TVL--CGLQESLKI 252
Score = 42 (19.8 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 649 LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIW 684
L F H + ++D+ E +LATG R + W
Sbjct: 178 LTEFKSHEGQIQSLDFHPHE-FLLATGSADRTVKFW 212
>ASPGD|ASPL0000041012 [details] [associations]
symbol:AN9085 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
HOGENOM:HOG000091644 OMA:HAGSVNE ProteinModelPortal:C8VH61
EnsemblFungi:CADANIAT00009529 Uniprot:C8VH61
Length = 359
Score = 170 (64.9 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 49/179 (27%), Positives = 81/179 (45%)
Query: 264 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVE 323
P+ +GH E FA+ + T + A+G R+I +W G + + L GH ++
Sbjct: 58 PIMELTGHSGEVFAVRFDPTAQHI-ASGSMDRSILLWNTY--GQCE-NYGILSGHKGAIL 113
Query: 324 DLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWN-RTEPLIV 382
DLQWS K + S S D+++ WD + H +N + + R + ++V
Sbjct: 114 DLQWSRDSKTIF-SASADMTLASWDIE----SGQRIRRYIGHEEVINSVEISKRGQEMLV 168
Query: 383 SGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDL 441
S DDG + +WD R+ + P+T V + F SGG D+ I +WD+
Sbjct: 169 SASDDGTMGIWDPRQ----KEAIDYLETELPITAVAQSEAGNEVF-SGGIDNAIHVWDI 222
Score = 140 (54.3 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 47/176 (26%), Positives = 75/176 (42%)
Query: 277 AMDWSSTEPGVLATGDCKRNIHIWTPREAGA---WQVDQKPLV----GHTNSVEDLQWSP 329
A+D+ TE + A + +++ A W + +K +V GH +++ L+ SP
Sbjct: 186 AIDYLETELPITAVAQSEAGNEVFSGGIDNAIHVWDIRKKAIVYSMAGHMDTITSLEVSP 245
Query: 330 GEKRVLASCSVDLSIRIWDTRVIN-TKSCMLTLPNAHTS-DVNVI--SWNRTEPLIVSGG 385
+ + L S S D ++R WD R T + T A + N+I SWN I +G
Sbjct: 246 -DSQTLLSNSFDSTVRTWDIRPFAPTNRHIRTYDGAPVGLEKNLIRASWNPAGDKIAAGS 304
Query: 386 DDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDL 441
D + VWD FK G + H V V + P S +D + L +L
Sbjct: 305 GDRSVVVWD---FKTGKILYKLPGHKGTVNDVRFTPNNEPIIVSASSDRNLMLGEL 357
Score = 132 (51.5 bits), Expect = 6.1e-08, Sum P(2) = 6.1e-08
Identities = 45/174 (25%), Positives = 76/174 (43%)
Query: 269 SGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWS 328
SGH + WS + + + W E+G ++ + +GH + ++ S
Sbjct: 106 SGHKGAILDLQWSRDSKTIFSAS-ADMTLASWDI-ESGQ-RI--RRYIGHEEVINSVEIS 160
Query: 329 PGEKRVLASCSVDLSIRIWDTRVINTKSCMLT-LPNAHTSDVNVISWNRTEPLIVSGGDD 387
+ +L S S D ++ IWD R + T LP + ++ + + SGG D
Sbjct: 161 KRGQEMLVSASDDGTMGIWDPRQKEAIDYLETELP------ITAVAQSEAGNEVFSGGID 214
Query: 388 GCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDL 441
IHVWD+R KK + V + H +T++E P +S T S D + WD+
Sbjct: 215 NAIHVWDIR--KK-AIVYSMAGHMDTITSLEVSP-DSQTLLSNSFDSTVRTWDI 264
Score = 96 (38.9 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 47/184 (25%), Positives = 77/184 (41%)
Query: 168 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAE 227
P+ +GH E FA+ + T + A+G R+I +W G + + L GH +
Sbjct: 58 PIMELTGHSGEVFAVRFDPTAQHI-ASGSMDRSILLWNTY--GQCE-NYGILSGHKGAIL 113
Query: 228 DLQWS-DLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPG 286
DLQWS D KT D LA + + G+ + + GH +++ S
Sbjct: 114 DLQWSRDSKTIFSASAD-MTLASWDIESGQR-------IRRYIGHEEVINSVEISKRGQE 165
Query: 287 VLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRI 346
+L + + IW PR+ A +D +V Q G + + S +D +I +
Sbjct: 166 MLVSASDDGTMGIWDPRQKEA--IDYLETELPITAVA--QSEAGNE--VFSGGIDNAIHV 219
Query: 347 WDTR 350
WD R
Sbjct: 220 WDIR 223
Score = 69 (29.3 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 16/60 (26%), Positives = 33/60 (55%)
Query: 704 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRIG 763
+A G R++ +W + ++ K L GH +V D++++P + ++ S S DR+ +G
Sbjct: 300 IAAGSGDRSVVVWDFKTG---KILYK-LPGHKGTVNDVRFTPNNEPIIVSASSDRNLMLG 355
>FB|FBgn0021874 [details] [associations]
symbol:Nle "Notchless" species:7227 "Drosophila melanogaster"
[GO:0007219 "Notch signaling pathway" evidence=ISS;TAS] [GO:0005112
"Notch binding" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005634 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0005112 GeneTree:ENSGT00690000102167 InterPro:IPR011047
SUPFAM:SSF50998 HSSP:P16649 PRINTS:PR00319 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 FlyBase:FBgn0021874 EMBL:AY089286
RefSeq:NP_477294.2 UniGene:Dm.13475 SMR:Q9VPR4 IntAct:Q9VPR4
MINT:MINT-291987 STRING:Q9VPR4 EnsemblMetazoa:FBtr0078075
GeneID:33234 KEGG:dme:Dmel_CG2863 UCSC:CG2863-RA CTD:33234
InParanoid:Q9VPR4 GenomeRNAi:33234 NextBio:782583 Uniprot:Q9VPR4
Length = 488
Score = 171 (65.3 bits), Expect = 3.6e-12, Sum P(2) = 3.6e-12
Identities = 43/125 (34%), Positives = 61/125 (48%)
Query: 315 LVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISW 374
+ GH N V D+++SP K ++AS S D S+R+W + M T H V ++W
Sbjct: 371 MTGHQNVVNDVKYSPDVK-LIASASFDKSVRLWRA---SDGQYMATF-RGHVQAVYTVAW 425
Query: 375 NRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADD 434
+ LIVSG D + VW ++ K + H V V+W P + S ASGG D
Sbjct: 426 SADSRLIVSGSKDSTLKVWSVQTKKLAQELPG---HADEVFGVDWAP-DGSRVASGGKDK 481
Query: 435 QIALW 439
I LW
Sbjct: 482 VIKLW 486
Score = 148 (57.2 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 50/159 (31%), Positives = 70/159 (44%)
Query: 264 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKR-NIHIWTPREAGAWQVDQKPLVGHTNSV 322
P F+ +GH + W+ + LA+G CK +I IW P E G Q +PL GH +
Sbjct: 153 PHFTCTGHKQWVLCVSWAP-DGKRLASG-CKAGSIIIWDP-ETG--QQKGRPLSGHKKHI 207
Query: 323 EDLQWSP----GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTE 378
L W P E R LAS S D RIWD ++ C++ + HT+ V + W
Sbjct: 208 NCLAWEPYHRDPECRKLASASGDGDCRIWDVKL---GQCLMNIAG-HTNAVTAVRWGGAG 263
Query: 379 PLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTV 417
LI + D + +W R G TF H V +
Sbjct: 264 -LIYTSSKDRTVKMW---RAADGILCRTFSGHAHWVNNI 298
Score = 130 (50.8 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 33/117 (28%), Positives = 52/117 (44%)
Query: 329 PGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDG 388
P E L SCS D ++ +W N C+ + H + VN + ++ LI S D
Sbjct: 342 PDEVESLVSCSDDNTLYLWRN---NQNKCVERM-TGHQNVVNDVKYSPDVKLIASASFDK 397
Query: 389 CIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVER 445
+ +W R G +ATF+ H V TV W +S SG D + +W + ++
Sbjct: 398 SVRLW---RASDGQYMATFRGHVQAVYTVAWS-ADSRLIVSGSKDSTLKVWSVQTKK 450
Score = 127 (49.8 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 39/130 (30%), Positives = 57/130 (43%)
Query: 317 GHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR 376
GH +V L +SP LAS S D ++R+WD +NT++ T H V +SW
Sbjct: 117 GHAEAVVSLNFSPDGAH-LASGSGDTTVRLWD---LNTETPHFTC-TGHKQWVLCVSWAP 171
Query: 377 TEPLIVSGGDDGCIHVWDLRRFK-KGSSVATFKHHTAPVTTVEWHP----TESSTFASGG 431
+ SG G I +WD + KG ++ K H + + W P E AS
Sbjct: 172 DGKRLASGCKAGSIIIWDPETGQQKGRPLSGHKKH---INCLAWEPYHRDPECRKLASAS 228
Query: 432 ADDQIALWDL 441
D +WD+
Sbjct: 229 GDGDCRIWDV 238
Score = 73 (30.8 bits), Expect = 3.6e-12, Sum P(2) = 3.6e-12
Identities = 36/139 (25%), Positives = 54/139 (38%)
Query: 168 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKR-NIHIWTPREAGAWQVDQKPLGGHTNSA 226
P F+ +GH + W+ + LA+G CK +I IW P E G Q +PL GH
Sbjct: 153 PHFTCTGHKQWVLCVSWAP-DGKRLASG-CKAGSIIIWDP-ETG--QQKGRPLSGHKKHI 207
Query: 227 EDLQWSDLKTALQTVDDPFQLAEHNKKRGKGP----GIPTPP-LFSFSGHLTEGFAMDWS 281
L W DP + + G G + L + +GH A+ W
Sbjct: 208 NCLAWEPYHR------DP-ECRKLASASGDGDCRIWDVKLGQCLMNIAGHTNAVTAVRWG 260
Query: 282 STEPGVLATGDCKRNIHIW 300
G++ T R + +W
Sbjct: 261 GA--GLIYTSSKDRTVKMW 277
Score = 70 (29.7 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 16/40 (40%), Positives = 24/40 (60%)
Query: 731 LVGHTNSVEDLQWSPGEKRVLASCSVDRSNRIGARRDMLY 770
+ GH N V D+++SP K ++AS S D+S R+ D Y
Sbjct: 371 MTGHQNVVNDVKYSPDVK-LIASASFDKSVRLWRASDGQY 409
Score = 51 (23.0 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 15/45 (33%), Positives = 21/45 (46%)
Query: 724 WQVDQKPLV----GHTNSVEDLQWSPGEKRVLASCSVDRSNRIGA 764
W V K L GH + V + W+P RV AS D+ ++ A
Sbjct: 444 WSVQTKKLAQELPGHADEVFGVDWAPDGSRV-ASGGKDKVIKLWA 487
Score = 50 (22.7 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 13/66 (19%), Positives = 32/66 (48%)
Query: 697 YTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSV 756
Y+ ++A+ +++ +W + G + + GH +V + WS + R++ S S
Sbjct: 383 YSPDVKLIASASFDKSVRLWRASD-GQYMATFR---GHVQAVYTVAWS-ADSRLIVSGSK 437
Query: 757 DRSNRI 762
D + ++
Sbjct: 438 DSTLKV 443
Score = 48 (22.0 bits), Expect = 2.3e-08, Sum P(3) = 2.3e-08
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 654 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIW 684
GH E F +DW+ V A+G + I +W
Sbjct: 457 GHADEVFGVDWAPDGSRV-ASGGKDKVIKLW 486
Score = 45 (20.9 bits), Expect = 8.1e-08, Sum P(3) = 8.1e-08
Identities = 7/35 (20%), Positives = 19/35 (54%)
Query: 651 SFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWT 685
+F GH+ + + WS+ + ++ +G + +W+
Sbjct: 412 TFRGHVQAVYTVAWSA-DSRLIVSGSKDSTLKVWS 445
>RGD|1308483 [details] [associations]
symbol:Pex7 "peroxisomal biogenesis factor 7" species:10116
"Rattus norvegicus" [GO:0001764 "neuron migration"
evidence=IEA;ISO] [GO:0001958 "endochondral ossification"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005053 "peroxisome matrix targeting signal-2 binding"
evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005777 "peroxisome" evidence=ISO] [GO:0005782 "peroxisomal
matrix" evidence=IEA;ISO] [GO:0005829 "cytosol" evidence=IEA;ISO]
[GO:0006625 "protein targeting to peroxisome" evidence=ISO]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA;ISO]
[GO:0007031 "peroxisome organization" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0008611 "ether lipid
biosynthetic process" evidence=IEA;ISO] [GO:0016558 "protein import
into peroxisome matrix" evidence=IEA;ISO] [GO:0019899 "enzyme
binding" evidence=IEA;ISO] [GO:0042803 "protein homodimerization
activity" evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1308483 GO:GO:0005829 GO:GO:0001764
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006635 GO:GO:0005782 GO:GO:0008611 GO:GO:0016558
GO:GO:0001958 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 GeneTree:ENSGT00700000104578
OrthoDB:EOG483D4V EMBL:BC100091 IPI:IPI00367874
RefSeq:NP_001029319.1 UniGene:Rn.162402 STRING:Q498S5
Ensembl:ENSRNOT00000016728 GeneID:308718 KEGG:rno:308718
UCSC:RGD:1308483 InParanoid:Q498S5 NextBio:659419
Genevestigator:Q498S5 Uniprot:Q498S5
Length = 318
Score = 191 (72.3 bits), Expect = 3.7e-12, P = 3.7e-12
Identities = 49/183 (26%), Positives = 85/183 (46%)
Query: 262 TPPLFSFSGHLTEGFAMDWSST-EPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTN 320
T PL + H E +++DWS T + ++ +G + + +W P + + GH +
Sbjct: 96 TGPLQVYKEHTQEVYSVDWSQTRDEQLVVSGSWDQTVKVWDPTVGNSLCTFR----GHES 151
Query: 321 SVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR-TEP 379
+ WSP AS S D ++RIWD + T + +P AH +++ W + E
Sbjct: 152 VIYSTIWSPHIPGCFASASGDQTLRIWD---VKTTGVRIVIP-AHQAEILSCDWCKYNEN 207
Query: 380 LIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALW 439
L+V+G D + WDLR ++ V HT + V++ P +S AS D + W
Sbjct: 208 LLVTGAVDCSLRGWDLRNVRQ--PVFELLGHTYAIRRVKFSPFHASVLASCSYDFTVRFW 265
Query: 440 DLA 442
+ +
Sbjct: 266 NFS 268
Score = 184 (69.8 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 40/120 (33%), Positives = 62/120 (51%)
Query: 324 DLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRT--EPLI 381
D+ WS + VL +CS D S+++WDT L + HT +V + W++T E L+
Sbjct: 67 DVTWSENNEHVLVTCSGDGSLQLWDTAKATGP---LQVYKEHTQEVYSVDWSQTRDEQLV 123
Query: 382 VSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDL 441
VSG D + VWD G+S+ TF+ H + + + W P FAS D + +WD+
Sbjct: 124 VSGSWDQTVKVWDPT---VGNSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLRIWDV 180
Score = 138 (53.6 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 55/236 (23%), Positives = 95/236 (40%)
Query: 180 FAMDWSSTEPGVLATGDCKRNIHIW-TPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTAL 238
F + WS VL T ++ +W T + G QV ++ HT + WS
Sbjct: 66 FDVTWSENNEHVLVTCSGDGSLQLWDTAKATGPLQVYKE----HTQEVYSVDWS------ 115
Query: 239 QTVDDPFQLAEHNKKRGK--GPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRN 296
QT D+ ++ + K P + L +F GH + ++ WS PG A+ +
Sbjct: 116 QTRDEQLVVSGSWDQTVKVWDPTVGNS-LCTFRGHESVIYSTIWSPHIPGCFASASGDQT 174
Query: 297 IHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKS 356
+ IW + G V + H + W + +L + +VD S+R WD R N +
Sbjct: 175 LRIWDVKTTGVRIV----IPAHQAEILSCDWCKYNENLLVTGAVDCSLRGWDLR--NVRQ 228
Query: 357 CMLTLPNAHTSDVNVISWNRTEP-LIVSGGDDGCIHVWDLRRFKKGSSVATFKHHT 411
+ L HT + + ++ ++ S D + W+ K + T +HHT
Sbjct: 229 PVFELLG-HTYAIRRVKFSPFHASVLASCSYDFTVRFWNFS--KPDPLLETVEHHT 281
Score = 136 (52.9 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 45/185 (24%), Positives = 76/185 (41%)
Query: 166 TPPLFSFSGHLTEGFAMDWSST-EPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTN 224
T PL + H E +++DWS T + ++ +G + + +W P + + GH +
Sbjct: 96 TGPLQVYKEHTQEVYSVDWSQTRDEQLVVSGSWDQTVKVWDPTVGNSLCTFR----GHES 151
Query: 225 SAEDLQWSD-LKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSST 283
WS + + L + K G I P H E + DW
Sbjct: 152 VIYSTIWSPHIPGCFASASGDQTLRIWDVKT-TGVRIVIP------AHQAEILSCDWCKY 204
Query: 284 EPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLS 343
+L TG ++ W R + L+GHT ++ +++SP VLASCS D +
Sbjct: 205 NENLLVTGAVDCSLRGWDLRNVRQPVFE---LLGHTYAIRRVKFSPFHASVLASCSYDFT 261
Query: 344 IRIWD 348
+R W+
Sbjct: 262 VRFWN 266
>UNIPROTKB|Q8R537 [details] [associations]
symbol:PEX7 "Peroxisomal targeting signal 2 receptor"
species:10029 "Cricetulus griseus" [GO:0005053 "peroxisome matrix
targeting signal-2 binding" evidence=ISS] [GO:0008611 "ether lipid
biosynthetic process" evidence=ISS] [GO:0016558 "protein import
into peroxisome matrix" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008611 GO:GO:0016558
EMBL:AB042621 RefSeq:NP_001231782.1 ProteinModelPortal:Q8R537
GeneID:100736556 CTD:5191 HOVERGEN:HBG003354 GO:GO:0005053
Uniprot:Q8R537
Length = 318
Score = 190 (71.9 bits), Expect = 4.9e-12, P = 4.9e-12
Identities = 49/183 (26%), Positives = 84/183 (45%)
Query: 262 TPPLFSFSGHLTEGFAMDWSSTE-PGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTN 320
T PL + H E +++DWS T ++ +G + + +W P + + GH +
Sbjct: 96 TGPLQVYKEHTQEVYSVDWSQTRGEQLVVSGSWDQTVKVWDPTVGNSLCTFR----GHES 151
Query: 321 SVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR-TEP 379
+ WSP AS S D ++RIWD + T + +P AH +++ W + E
Sbjct: 152 VIYSTIWSPHIPGCFASASGDQTLRIWD---VKTAGVRIVIP-AHQTEILSCDWCKYNEN 207
Query: 380 LIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALW 439
L+V+G D + WDLR ++ V HT + V++ P +S AS D + W
Sbjct: 208 LVVTGAVDCSLRGWDLRNVRQ--PVFELLGHTYAIRRVKFSPFHASVLASCSYDFTVRFW 265
Query: 440 DLA 442
+ +
Sbjct: 266 NFS 268
Score = 183 (69.5 bits), Expect = 3.1e-11, P = 3.1e-11
Identities = 40/120 (33%), Positives = 62/120 (51%)
Query: 324 DLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRT--EPLI 381
D+ WS + VL +CS D S+++WDT L + HT +V + W++T E L+
Sbjct: 67 DVTWSEDNEHVLVTCSGDGSLQLWDTAKATGP---LQVYKEHTQEVYSVDWSQTRGEQLV 123
Query: 382 VSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDL 441
VSG D + VWD G+S+ TF+ H + + + W P FAS D + +WD+
Sbjct: 124 VSGSWDQTVKVWDPT---VGNSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLRIWDV 180
Score = 141 (54.7 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 56/263 (21%), Positives = 102/263 (38%)
Query: 180 FAMDWSSTEPGVLATGDCKRNIHIW-TPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTAL 238
F + WS VL T ++ +W T + G QV ++ HT + WS +
Sbjct: 66 FDVTWSEDNEHVLVTCSGDGSLQLWDTAKATGPLQVYKE----HTQEVYSVDWSQTRGEQ 121
Query: 239 QTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIH 298
V + + P + L +F GH + ++ WS PG A+ + +
Sbjct: 122 LVVSGSWD----QTVKVWDPTVGNS-LCTFRGHESVIYSTIWSPHIPGCFASASGDQTLR 176
Query: 299 IWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCM 358
IW + AG V + H + W + ++ + +VD S+R WD R N + +
Sbjct: 177 IWDVKTAGVRIV----IPAHQTEILSCDWCKYNENLVVTGAVDCSLRGWDLR--NVRQPV 230
Query: 359 LTLPNAHTSDVNVISWNRTEP-LIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTV 417
L HT + + ++ ++ S D + W+ K + T +HHT +
Sbjct: 231 FELLG-HTYAIRRVKFSPFHASVLASCSYDFTVRFWNFS--KPDPLLETVEHHTEFTCGL 287
Query: 418 EWHPTESSTFASGGADDQIALWD 440
+ + A D+ I ++D
Sbjct: 288 DLSLQSPTEVADCSWDETIKIYD 310
Score = 137 (53.3 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 45/185 (24%), Positives = 76/185 (41%)
Query: 166 TPPLFSFSGHLTEGFAMDWSSTE-PGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTN 224
T PL + H E +++DWS T ++ +G + + +W P + + GH +
Sbjct: 96 TGPLQVYKEHTQEVYSVDWSQTRGEQLVVSGSWDQTVKVWDPTVGNSLCTFR----GHES 151
Query: 225 SAEDLQWSD-LKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSST 283
WS + + L + K G I P H TE + DW
Sbjct: 152 VIYSTIWSPHIPGCFASASGDQTLRIWDVKTA-GVRIVIP------AHQTEILSCDWCKY 204
Query: 284 EPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLS 343
++ TG ++ W R + L+GHT ++ +++SP VLASCS D +
Sbjct: 205 NENLVVTGAVDCSLRGWDLRNVRQPVFE---LLGHTYAIRRVKFSPFHASVLASCSYDFT 261
Query: 344 IRIWD 348
+R W+
Sbjct: 262 VRFWN 266
>MGI|MGI:1321392 [details] [associations]
symbol:Pex7 "peroxisomal biogenesis factor 7" species:10090
"Mus musculus" [GO:0001764 "neuron migration" evidence=IMP]
[GO:0001958 "endochondral ossification" evidence=IMP] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005777 "peroxisome"
evidence=ISO] [GO:0005782 "peroxisomal matrix" evidence=ISO]
[GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006625 "protein
targeting to peroxisome" evidence=IMP] [GO:0006635 "fatty acid
beta-oxidation" evidence=IMP] [GO:0006810 "transport" evidence=IEA]
[GO:0007031 "peroxisome organization" evidence=ISO] [GO:0008611
"ether lipid biosynthetic process" evidence=ISO] [GO:0015031
"protein transport" evidence=IEA] [GO:0016558 "protein import into
peroxisome matrix" evidence=ISO;IMP] [GO:0019899 "enzyme binding"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1321392 GO:GO:0005829 GO:GO:0001764
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006635 GO:GO:0005782 GO:GO:0008611 GO:GO:0016558
GO:GO:0001958 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 EMBL:U69171 EMBL:BC132213
EMBL:BC132503 IPI:IPI00130134 RefSeq:NP_032848.1 UniGene:Mm.338363
ProteinModelPortal:P97865 SMR:P97865 STRING:P97865
PhosphoSite:P97865 PaxDb:P97865 PRIDE:P97865
Ensembl:ENSMUST00000020182 GeneID:18634 KEGG:mmu:18634
UCSC:uc007enl.2 GeneTree:ENSGT00700000104578 InParanoid:A2RSR2
OrthoDB:EOG483D4V NextBio:294604 Bgee:P97865 CleanEx:MM_PEX7
Genevestigator:P97865 GermOnline:ENSMUSG00000020003 Uniprot:P97865
Length = 318
Score = 190 (71.9 bits), Expect = 4.9e-12, P = 4.9e-12
Identities = 49/183 (26%), Positives = 84/183 (45%)
Query: 262 TPPLFSFSGHLTEGFAMDWSSTE-PGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTN 320
T PL + H E +++DWS T ++ +G + + +W P + + GH +
Sbjct: 96 TGPLQVYKEHTQEVYSVDWSQTRGEQLVVSGSWDQTVKVWDPTVGNSLCTFR----GHES 151
Query: 321 SVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR-TEP 379
+ WSP AS S D ++RIWD + T + +P AH +++ W + E
Sbjct: 152 VIYSTIWSPHIPGCFASASGDQTLRIWD---VKTTGVRIVIP-AHQTEILSCDWCKYNEN 207
Query: 380 LIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALW 439
L+V+G D + WDLR ++ V HT + V++ P +S AS D + W
Sbjct: 208 LVVTGAVDCSLRGWDLRNVRQ--PVFELLGHTYAIRRVKFSPFHASVLASCSYDFTVRFW 265
Query: 440 DLA 442
+ +
Sbjct: 266 NFS 268
Score = 184 (69.8 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 40/120 (33%), Positives = 62/120 (51%)
Query: 324 DLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRT--EPLI 381
D+ WS + VL +CS D S+++WDT L + HT +V + W++T E L+
Sbjct: 67 DVTWSENNEHVLVTCSGDGSLQLWDTAKATGP---LQVYKEHTQEVYSVDWSQTRGEQLV 123
Query: 382 VSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDL 441
VSG D + VWD G+S+ TF+ H + + + W P FAS D + +WD+
Sbjct: 124 VSGSWDQTVKVWDPT---VGNSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLRIWDV 180
Score = 138 (53.6 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 55/263 (20%), Positives = 101/263 (38%)
Query: 180 FAMDWSSTEPGVLATGDCKRNIHIW-TPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTAL 238
F + WS VL T ++ +W T + G QV ++ HT + WS +
Sbjct: 66 FDVTWSENNEHVLVTCSGDGSLQLWDTAKATGPLQVYKE----HTQEVYSVDWSQTRGEQ 121
Query: 239 QTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIH 298
V + + P + L +F GH + ++ WS PG A+ + +
Sbjct: 122 LVVSGSWD----QTVKVWDPTVGNS-LCTFRGHESVIYSTIWSPHIPGCFASASGDQTLR 176
Query: 299 IWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCM 358
IW + G V + H + W + ++ + +VD S+R WD R N + +
Sbjct: 177 IWDVKTTGVRIV----IPAHQTEILSCDWCKYNENLVVTGAVDCSLRGWDLR--NVRQPV 230
Query: 359 LTLPNAHTSDVNVISWNRTEP-LIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTV 417
L HT + + ++ ++ S D + W+ K + T +HHT +
Sbjct: 231 FELLG-HTYAIRRVKFSPFHASVLASCSYDFTVRFWNFS--KPDPLLETVEHHTEFTCGL 287
Query: 418 EWHPTESSTFASGGADDQIALWD 440
+ + A D+ I ++D
Sbjct: 288 DLSLQSPTQVADCSWDETIKIYD 310
Score = 136 (52.9 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 45/185 (24%), Positives = 76/185 (41%)
Query: 166 TPPLFSFSGHLTEGFAMDWSSTE-PGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTN 224
T PL + H E +++DWS T ++ +G + + +W P + + GH +
Sbjct: 96 TGPLQVYKEHTQEVYSVDWSQTRGEQLVVSGSWDQTVKVWDPTVGNSLCTFR----GHES 151
Query: 225 SAEDLQWSD-LKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSST 283
WS + + L + K G I P H TE + DW
Sbjct: 152 VIYSTIWSPHIPGCFASASGDQTLRIWDVKT-TGVRIVIP------AHQTEILSCDWCKY 204
Query: 284 EPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLS 343
++ TG ++ W R + L+GHT ++ +++SP VLASCS D +
Sbjct: 205 NENLVVTGAVDCSLRGWDLRNVRQPVFE---LLGHTYAIRRVKFSPFHASVLASCSYDFT 261
Query: 344 IRIWD 348
+R W+
Sbjct: 262 VRFWN 266
>UNIPROTKB|A7RWD2 [details] [associations]
symbol:v1g226592 "Probable cytosolic iron-sulfur protein
assembly protein" species:45351 "Nematostella vectensis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:DS469546
RefSeq:XP_001636358.1 UniGene:Nve.10750 ProteinModelPortal:A7RWD2
STRING:A7RWD2 EnsemblMetazoa:NEMVEDRAFT_v1g226592-RA GeneID:5516269
KEGG:nve:NEMVE_v1g226592 Uniprot:A7RWD2
Length = 327
Score = 190 (71.9 bits), Expect = 5.6e-12, P = 5.6e-12
Identities = 81/336 (24%), Positives = 140/336 (41%)
Query: 173 SGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWS 232
+GH +++ WS VLA+ + I IW +E W GH + L WS
Sbjct: 2 TGHEDRVWSVAWSPNG-FVLASCGGDKTIRIWG-KEGDKWICKTILEDGHQRTIRSLGWS 59
Query: 233 DLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGD 292
T L + ++K G+ T GH E ++DWS +LAT
Sbjct: 60 PCGTFLASASFDATTCIWDQKSGEFECNAT-----LEGHENEVKSVDWS-VSGSLLATCG 113
Query: 293 CKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVI 352
+++ IW +E ++ + HT V+ + W P K +LASCS D +I+++
Sbjct: 114 RDKSVWIWEVQEDDEYEC-ASVIHSHTQDVKKVVWHP-TKEILASCSYDDTIKLYKEDE- 170
Query: 353 NTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSS---VATFKH 409
+ SC TL H S V IS++ + IVS DD + +W + + G+ V + KH
Sbjct: 171 DDWSCCDTL-EGHESTVWSISFDGSGDRIVSCSDDKTVRIW--KSYPPGNQEGVVVSGKH 227
Query: 410 ------------HTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELK 457
H + V W S A+ DD I ++ + D+ ++ + +
Sbjct: 228 TKWKCVCVLSGYHDRTIYDVHWSKV-SGLIATASGDDCIRIF----KEDTNSDRNQPSFQ 282
Query: 458 DLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSG 493
+ +Q H ++ + WHP+ + + ++ G
Sbjct: 283 LVATQRK-AH--SMDVNSICWHPKDENILATCSDDG 315
Score = 151 (58.2 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 39/136 (28%), Positives = 61/136 (44%)
Query: 315 LVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISW 374
+ GH + V + WSP VLASC D +IRIW + C L + H + + W
Sbjct: 1 MTGHEDRVWSVAWSPNGF-VLASCGGDKTIRIWGKEG-DKWICKTILEDGHQRTIRSLGW 58
Query: 375 NRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADD 434
+ + S D +WD ++ + AT + H V +V+W S A+ G D
Sbjct: 59 SPCGTFLASASFDATTCIWD-QKSGEFECNATLEGHENEVKSVDWS-VSGSLLATCGRDK 116
Query: 435 QIALWDLAVERDSEIE 450
+ +W+ V+ D E E
Sbjct: 117 SVWIWE--VQEDDEYE 130
Score = 147 (56.8 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 64/280 (22%), Positives = 122/280 (43%)
Query: 270 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSP 329
GH ++ WS LA+ IW +++G ++ + L GH N V+ + WS
Sbjct: 48 GHQRTIRSLGWSPCGT-FLASASFDATTCIWD-QKSGEFECNAT-LEGHENEVKSVDWSV 104
Query: 330 GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGC 389
+LA+C D S+ IW+ + + C + ++HT DV + W+ T+ ++ S D
Sbjct: 105 SGS-LLATCGRDKSVWIWEVQEDDEYECASVI-HSHTQDVKKVVWHPTKEILASCSYDDT 162
Query: 390 IHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSE- 448
I ++ S T + H + V ++ + + S D + +W + E
Sbjct: 163 IKLYKEDE-DDWSCCDTLEGHESTVWSISFDGS-GDRIVSCSDDKTVRIWKSYPPGNQEG 220
Query: 449 --IEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSG--FNIFR--TISD 502
+ + + K + L H + I ++HW ++ G +I+TA+ IF+ T SD
Sbjct: 221 VVVSGKHTKWKCV-CVLSGYH--DRTIYDVHWS-KVSG-LIATASGDDCIRIFKEDTNSD 275
Query: 503 L--PS-QLLFIH--LGQKEIKELHWHPQLPGTIISTANSG 537
PS QL+ ++ + WHP+ + + ++ G
Sbjct: 276 RNQPSFQLVATQRKAHSMDVNSICWHPKDENILATCSDDG 315
Score = 129 (50.5 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 59/243 (24%), Positives = 104/243 (42%)
Query: 171 SFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQ 230
+ GH E ++DWS +LAT +++ IW +E ++ + HT + +
Sbjct: 89 TLEGHENEVKSVDWS-VSGSLLATCGRDKSVWIWEVQEDDEYEC-ASVIHSHTQDVKKVV 146
Query: 231 WSDLKTALQTV--DDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVL 288
W K L + DD +L + ++ + GH + +++ + + ++
Sbjct: 147 WHPTKEILASCSYDDTIKLYKEDEDDWSCCD-------TLEGHESTVWSISFDGSGDRIV 199
Query: 289 ATGDCKRNIHIWTPREAGAWQ---VDQKP--------LVG-HTNSVEDLQWSPGEKRVLA 336
+ D K + IW G + V K L G H ++ D+ WS ++A
Sbjct: 200 SCSDDK-TVRIWKSYPPGNQEGVVVSGKHTKWKCVCVLSGYHDRTIYDVHWSK-VSGLIA 257
Query: 337 SCSVDLSIRIW--DTRVI-NTKSCML--TLPNAHTSDVNVISWN-RTEPLIVSGGDDGCI 390
+ S D IRI+ DT N S L T AH+ DVN I W+ + E ++ + DDG +
Sbjct: 258 TASGDDCIRIFKEDTNSDRNQPSFQLVATQRKAHSMDVNSICWHPKDENILATCSDDGTV 317
Query: 391 HVW 393
+W
Sbjct: 318 KLW 320
Score = 60 (26.2 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 18/61 (29%), Positives = 29/61 (47%)
Query: 702 GVLATG---DCKRNIHIWT--PREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSV 756
G++AT DC R T R ++Q+ H+ V + W P ++ +LA+CS
Sbjct: 254 GLIATASGDDCIRIFKEDTNSDRNQPSFQLVATQRKAHSMDVNSICWHPKDENILATCSD 313
Query: 757 D 757
D
Sbjct: 314 D 314
>UNIPROTKB|B4GDM7 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7234 "Drosophila persimilis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH479181 OrthoDB:EOG45DV4X RefSeq:XP_002015794.1
ProteinModelPortal:B4GDM7 GeneID:6591258 KEGG:dpe:Dper_GL10827
FlyBase:FBgn0148437 Uniprot:B4GDM7
Length = 335
Score = 190 (71.9 bits), Expect = 6.2e-12, P = 6.2e-12
Identities = 79/340 (23%), Positives = 149/340 (43%)
Query: 171 SFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQ 230
+ GH + + W + G+ K I +W+ W GH + +++
Sbjct: 9 TLQGHKGRIWGVAWHPKGNVFASCGEDKA-IRVWS-LSGNTWSTKTILSDGHKRTIREIR 66
Query: 231 WSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLAT 290
WS L + A +K G+ T GH E ++ WS + G+LAT
Sbjct: 67 WSPCGQYLASASFDATTAIWSKSSGEFECNAT-----LEGHENEVKSVSWSRSG-GLLAT 120
Query: 291 GDCKRNIHIWTPREAGAWQVDQKPLVG-HTNSVEDLQWSPGEKRVLASCSVDLSIRIW-D 348
C R+ +W AG + + ++ HT V+ + W P K +LAS S D +I+++ +
Sbjct: 121 --CSRDKSVWIWEVAGDDEFECAAVLNAHTQDVKRVVWHP-TKDILASASYDNTIKMFAE 177
Query: 349 TRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSS--VAT 406
+++ + C TL ++HTS V I ++ +VS DD + +W R + G+ +AT
Sbjct: 178 SQLDSDWDCTATL-SSHTSTVWSIDFDAEGDRLVSCSDDKTLKIW--RAYHPGNDAGIAT 234
Query: 407 ------FK-------HHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQRE 453
+K H+ + V W + A+G DD I ++ + S+ ++ E
Sbjct: 235 PDKQSVWKCVCTLSGQHSRAIYDVSWCKL-TGLIATGCGDDGIRIF----KETSDSKRDE 289
Query: 454 AELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSG 493
+ L ++ H ++++ + W+P + G +IS ++ G
Sbjct: 290 PTFEQLTAEET-AH--EQDVNAVEWNPAVAGQLISCSDDG 326
Score = 182 (69.1 bits), Expect = 5.1e-11, P = 5.1e-11
Identities = 68/279 (24%), Positives = 123/279 (44%)
Query: 270 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSP 329
GH + WS LA+ IW+ + +G ++ + L GH N V+ + WS
Sbjct: 57 GHKRTIREIRWSPCGQ-YLASASFDATTAIWS-KSSGEFECNAT-LEGHENEVKSVSWSR 113
Query: 330 GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGC 389
+LA+CS D S+ IW+ + C L NAHT DV + W+ T+ ++ S D
Sbjct: 114 SGG-LLATCSRDKSVWIWEVAGDDEFECAAVL-NAHTQDVKRVVWHPTKDILASASYDNT 171
Query: 390 IHVWDLRRFKKG-SSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSE 448
I ++ + AT HT+ V ++++ E S D + +W A ++
Sbjct: 172 IKMFAESQLDSDWDCTATLSSHTSTVWSIDFD-AEGDRLVSCSDDKTLKIWR-AYHPGND 229
Query: 449 IEQREAELKDLPSQLLFIHLGQ--KEIKELHWHPQLPGTIIS-TANSGFNIFRTISDL-- 503
+ + + + + GQ + I ++ W +L G I + + G IF+ SD
Sbjct: 230 AGIATPDKQSVWKCVCTLS-GQHSRAIYDVSWC-KLTGLIATGCGDDGIRIFKETSDSKR 287
Query: 504 --PS--QLLFIHLG-QKEIKELHWHPQLPGTIISTANSG 537
P+ QL ++++ + W+P + G +IS ++ G
Sbjct: 288 DEPTFEQLTAEETAHEQDVNAVEWNPAVAGQLISCSDDG 326
>UNIPROTKB|Q292E8 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:46245 "Drosophila pseudoobscura
pseudoobscura" [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CM000071 GenomeReviews:CM000071_GR OMA:SWKCVCT
OrthoDB:EOG45DV4X HSSP:P63005 RefSeq:XP_001360339.1
ProteinModelPortal:Q292E8 GeneID:4803656 KEGG:dpo:Dpse_GA11817
FlyBase:FBgn0071866 InParanoid:Q292E8 Uniprot:Q292E8
Length = 335
Score = 190 (71.9 bits), Expect = 6.2e-12, P = 6.2e-12
Identities = 79/340 (23%), Positives = 149/340 (43%)
Query: 171 SFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQ 230
+ GH + + W + G+ K I +W+ W GH + +++
Sbjct: 9 TLQGHKGRIWGVAWHPKGNVFASCGEDKA-IRVWS-LSGNTWSTKTILSDGHKRTIREIR 66
Query: 231 WSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLAT 290
WS L + A +K G+ T GH E ++ WS + G+LAT
Sbjct: 67 WSPCGQYLASASFDATTAIWSKSSGEFECNAT-----LEGHENEVKSVSWSRSG-GLLAT 120
Query: 291 GDCKRNIHIWTPREAGAWQVDQKPLVG-HTNSVEDLQWSPGEKRVLASCSVDLSIRIW-D 348
C R+ +W AG + + ++ HT V+ + W P K +LAS S D +I+++ +
Sbjct: 121 --CSRDKSVWIWEVAGDDEFECAAVLNAHTQDVKRVVWHP-TKDILASASYDNTIKMFAE 177
Query: 349 TRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSS--VAT 406
+++ + C TL ++HTS V I ++ +VS DD + +W R + G+ +AT
Sbjct: 178 SQLDSDWDCTATL-SSHTSTVWSIDFDAEGDRLVSCSDDKTLKIW--RAYHPGNDAGIAT 234
Query: 407 ------FK-------HHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQRE 453
+K H+ + V W + A+G DD I ++ + S+ ++ E
Sbjct: 235 PDKQSVWKCVCTLSGQHSRAIYDVSWCKL-TGLIATGCGDDGIRIF----KETSDSKRDE 289
Query: 454 AELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSG 493
+ L ++ H ++++ + W+P + G +IS ++ G
Sbjct: 290 PTFEQLTAEET-AH--EQDVNAVEWNPAVAGQLISCSDDG 326
Score = 182 (69.1 bits), Expect = 5.1e-11, P = 5.1e-11
Identities = 68/279 (24%), Positives = 123/279 (44%)
Query: 270 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSP 329
GH + WS LA+ IW+ + +G ++ + L GH N V+ + WS
Sbjct: 57 GHKRTIREIRWSPCGQ-YLASASFDATTAIWS-KSSGEFECNAT-LEGHENEVKSVSWSR 113
Query: 330 GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGC 389
+LA+CS D S+ IW+ + C L NAHT DV + W+ T+ ++ S D
Sbjct: 114 SGG-LLATCSRDKSVWIWEVAGDDEFECAAVL-NAHTQDVKRVVWHPTKDILASASYDNT 171
Query: 390 IHVWDLRRFKKG-SSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSE 448
I ++ + AT HT+ V ++++ E S D + +W A ++
Sbjct: 172 IKMFAESQLDSDWDCTATLSSHTSTVWSIDFD-AEGDRLVSCSDDKTLKIWR-AYHPGND 229
Query: 449 IEQREAELKDLPSQLLFIHLGQ--KEIKELHWHPQLPGTIIS-TANSGFNIFRTISDL-- 503
+ + + + + GQ + I ++ W +L G I + + G IF+ SD
Sbjct: 230 AGIATPDKQSVWKCVCTLS-GQHSRAIYDVSWC-KLTGLIATGCGDDGIRIFKETSDSKR 287
Query: 504 --PS--QLLFIHLG-QKEIKELHWHPQLPGTIISTANSG 537
P+ QL ++++ + W+P + G +IS ++ G
Sbjct: 288 DEPTFEQLTAEETAHEQDVNAVEWNPAVAGQLISCSDDG 326
>TAIR|locus:2057381 [details] [associations]
symbol:emb1345 "AT2G26060" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0009793 "embryo development
ending in seed dormancy" evidence=NAS] [GO:0000394 "RNA splicing,
via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0009086 "methionine biosynthetic process" evidence=RCA]
[GO:0010048 "vernalization response" evidence=RCA] [GO:0048573
"photoperiodism, flowering" evidence=RCA] [GO:0051604 "protein
maturation" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AC004747 HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:AY093154
EMBL:AY085277 EMBL:BT003394 IPI:IPI00536484 PIR:T02617
RefSeq:NP_565615.1 UniGene:At.38940 ProteinModelPortal:O80990
SMR:O80990 PaxDb:O80990 PRIDE:O80990 EnsemblPlants:AT2G26060.1
GeneID:817147 KEGG:ath:AT2G26060 TAIR:At2g26060 InParanoid:O80990
PhylomeDB:O80990 ProtClustDB:CLSN2917143 ArrayExpress:O80990
Genevestigator:O80990 Uniprot:O80990
Length = 352
Score = 164 (62.8 bits), Expect = 6.6e-12, Sum P(2) = 6.6e-12
Identities = 48/177 (27%), Positives = 75/177 (42%)
Query: 270 GHLTEGFAMDW---SSTEPGV---LATGDCKRNIHIWTPREAG-AWQVDQKPLVGHTNSV 322
GH +++ W SS GV LA+ + IW +W HT +V
Sbjct: 18 GHTDRVWSVAWNPVSSHADGVSPILASCSGDNTVRIWEQSSLSRSWTCKTVLEETHTRTV 77
Query: 323 EDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIV 382
WSP + +LA+ S D + IW + C+ TL H ++V +SWN + +
Sbjct: 78 RSCAWSPSGQ-LLATASFDGTTGIWKNYGSEFE-CISTL-EGHENEVKSVSWNASGSCLA 134
Query: 383 SGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALW 439
+ D + +W++ + A HT V V+WHPT F S D+ I +W
Sbjct: 135 TCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWHPTMDVLF-SCSYDNTIKVW 190
Score = 163 (62.4 bits), Expect = 8.8e-12, Sum P(2) = 8.8e-12
Identities = 45/180 (25%), Positives = 84/180 (46%)
Query: 310 VDQKPLVGHTNSVEDLQWSP------GEKRVLASCSVDLSIRIWDTRVINTK-SCMLTLP 362
V+ + L GHT+ V + W+P G +LASCS D ++RIW+ ++ +C L
Sbjct: 11 VEIQKLEGHTDRVWSVAWNPVSSHADGVSPILASCSGDNTVRIWEQSSLSRSWTCKTVLE 70
Query: 363 NAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPT 422
HT V +W+ + L+ + DG +W + ++T + H V +V W+ +
Sbjct: 71 ETHTRTVRSCAWSPSGQLLATASFDGTTGIWK-NYGSEFECISTLEGHENEVKSVSWNAS 129
Query: 423 ESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQL 482
S A+ D + +W++ +E E + + +L H +++K + WHP +
Sbjct: 130 -GSCLATCSRDKSVWIWEV-------LEGNEYDC----AAVLTGHT--QDVKMVQWHPTM 175
Score = 143 (55.4 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 66/281 (23%), Positives = 113/281 (40%)
Query: 184 WSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDD 243
WS + +LAT IW + G+ L GH N + + W+ + L T
Sbjct: 82 WSPSGQ-LLATASFDGTTGIW--KNYGSEFECISTLEGHENEVKSVSWNASGSCLATCSR 138
Query: 244 PFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIW-TP 302
+ G +GH + + W T VL + I +W +
Sbjct: 139 DKSVWIWEVLEGNEYDCAAV----LTGHTQDVKMVQWHPTMD-VLFSCSYDNTIKVWWSE 193
Query: 303 REAGAWQVDQ---KPLVGHTNSVEDLQWSP-GEKRVLASCSVDLSIRIWDTRVINTKSC- 357
+ G +Q Q + GH+++V + ++ G+K V +CS DL+++IW T + +S
Sbjct: 194 DDDGEYQCVQTLGESNNGHSSTVWSISFNAAGDKMV--TCSDDLTLKIWGTDIAKMQSGE 251
Query: 358 -------MLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVW-DLRRFK-KGSSVATF- 407
+ TL H + W+R + +I SG D I ++ D + G S
Sbjct: 252 EYAPWIHLCTLSGYHDRTIYSAHWSRDD-IIASGAGDNAIRLFVDSKHDSVDGPSYNLLL 310
Query: 408 ---KHHTAPVTTVEWHPTESSTFASGGADD-QIALWDLAVE 444
K H V +V+W P E + + +DD + +W LA +
Sbjct: 311 KKNKAHENDVNSVQWSPGEGNRLLASASDDGMVKIWQLATK 351
Score = 72 (30.4 bits), Expect = 6.6e-12, Sum P(2) = 6.6e-12
Identities = 15/25 (60%), Positives = 17/25 (68%)
Query: 734 HTNSVEDLQWSPGE-KRVLASCSVD 757
H N V +QWSPGE R+LAS S D
Sbjct: 316 HENDVNSVQWSPGEGNRLLASASDD 340
>FB|FBgn0033972 [details] [associations]
symbol:Ciao1 "Ciao1" species:7227 "Drosophila melanogaster"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE013599 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 OMA:SWKCVCT
OrthoDB:EOG45DV4X CTD:9391 GeneTree:ENSGT00700000104486
EMBL:AY061388 RefSeq:NP_610996.1 UniGene:Dm.630
ProteinModelPortal:Q7K1Y4 SMR:Q7K1Y4 IntAct:Q7K1Y4 STRING:Q7K1Y4
PaxDb:Q7K1Y4 PRIDE:Q7K1Y4 EnsemblMetazoa:FBtr0087460 GeneID:36655
KEGG:dme:Dmel_CG12797 UCSC:CG12797-RA FlyBase:FBgn0033972
InParanoid:Q7K1Y4 PhylomeDB:Q7K1Y4 GenomeRNAi:36655 NextBio:799718
Bgee:Q7K1Y4 Uniprot:Q7K1Y4
Length = 335
Score = 181 (68.8 bits), Expect = 7.7e-12, Sum P(2) = 7.7e-12
Identities = 82/340 (24%), Positives = 143/340 (42%)
Query: 171 SFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQ 230
+ GH + + W + G+ K I IW+ W GH + +++
Sbjct: 9 TLQGHKGRIWGVAWHPKGNVFASCGEDKA-IRIWS-LTGNTWSTKTILSDGHKRTIREIR 66
Query: 231 WSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLAT 290
WS L + A +K G+ T GH E ++ WS + G+LAT
Sbjct: 67 WSPCGQYLASASFDATTAIWSKSSGEFECNAT-----LEGHENEVKSVSWSRSG-GLLAT 120
Query: 291 GDCKRNIHIWTPREAGAWQVDQKPLVG-HTNSVEDLQWSPGEKRVLASCSVDLSIRIWDT 349
C R+ +W AG + + ++ HT V+ + W P K +LAS S D +I+++
Sbjct: 121 --CSRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVWHP-TKDILASASYDNTIKMFAE 177
Query: 350 RVI-NTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSS--VAT 406
I N C TL +HTS V I ++ +VS DD I +W R + G++ VAT
Sbjct: 178 EPIDNDWDCTATL-TSHTSTVWGIDFDADGERLVSCSDDTTIKIW--RAYHPGNTAGVAT 234
Query: 407 ------FK-------HHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQRE 453
+K H+ + V W + A+ DD I ++ + S+ + E
Sbjct: 235 PDQQTVWKCVCTVSGQHSRAIYDVSWCKL-TGLIATACGDDGIRIF----KESSDSKPDE 289
Query: 454 AELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSG 493
+ + ++ H +++ + W+P + G +IS ++ G
Sbjct: 290 PTFEQITAEE-GAH--DQDVNSVQWNPVVAGQLISCSDDG 326
Score = 175 (66.7 bits), Expect = 3.9e-11, Sum P(2) = 3.9e-11
Identities = 69/280 (24%), Positives = 121/280 (43%)
Query: 270 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSP 329
GH + WS LA+ IW+ + +G ++ + L GH N V+ + WS
Sbjct: 57 GHKRTIREIRWSPCGQ-YLASASFDATTAIWS-KSSGEFECNAT-LEGHENEVKSVSWSR 113
Query: 330 GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGC 389
+LA+CS D S+ IW+ + C L N HT DV + W+ T+ ++ S D
Sbjct: 114 SGG-LLATCSRDKSVWIWEVAGDDEFECAAVL-NPHTQDVKRVVWHPTKDILASASYDNT 171
Query: 390 IHVWDLRRFKKG-SSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSE 448
I ++ AT HT+ V +++ + S D I +W A +
Sbjct: 172 IKMFAEEPIDNDWDCTATLTSHTSTVWGIDFD-ADGERLVSCSDDTTIKIWR-AYHPGNT 229
Query: 449 IEQREAELKDLPSQLLFIHLGQ--KEIKELHWHPQLPGTIISTA--NSGFNIFRTISDL- 503
+ + + + + GQ + I ++ W +L G +I+TA + G IF+ SD
Sbjct: 230 AGVATPDQQTVWKCVCTVS-GQHSRAIYDVSWC-KLTG-LIATACGDDGIRIFKESSDSK 286
Query: 504 PSQLLFIHLGQKE------IKELHWHPQLPGTIISTANSG 537
P + F + +E + + W+P + G +IS ++ G
Sbjct: 287 PDEPTFEQITAEEGAHDQDVNSVQWNPVVAGQLISCSDDG 326
Score = 51 (23.0 bits), Expect = 7.7e-12, Sum P(2) = 7.7e-12
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 734 HTNSVEDLQWSPGEKRVLASCSVDRSNRI 762
H V +QW+P L SCS D + +I
Sbjct: 302 HDQDVNSVQWNPVVAGQLISCSDDGTIKI 330
>UNIPROTKB|Q9GZL7 [details] [associations]
symbol:WDR12 "Ribosome biogenesis protein WDR12"
species:9606 "Homo sapiens" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005654
"nucleoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IC] [GO:0008283 "cell proliferation" evidence=IMP]
[GO:0070545 "PeBoW complex" evidence=IDA] [GO:0000463 "maturation
of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0030687 "preribosome, large subunit
precursor" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 GO:GO:0030687
GO:GO:0070545 GO:GO:0000463 GO:GO:0000466 InterPro:IPR012972
Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464 OMA:LQTRFFT
HAMAP:MF_03029 CTD:55759 HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM
EMBL:AF242546 EMBL:AK001743 EMBL:AK022781 EMBL:AK022782
EMBL:AK056092 EMBL:BC008082 IPI:IPI00304232 RefSeq:NP_060726.3
UniGene:Hs.73291 ProteinModelPortal:Q9GZL7 SMR:Q9GZL7 IntAct:Q9GZL7
STRING:Q9GZL7 PhosphoSite:Q9GZL7 DMDM:20140802 SWISS-2DPAGE:Q9GZL7
PaxDb:Q9GZL7 PeptideAtlas:Q9GZL7 PRIDE:Q9GZL7 DNASU:55759
Ensembl:ENST00000261015 GeneID:55759 KEGG:hsa:55759 UCSC:uc002uzl.3
GeneCards:GC02M203709 HGNC:HGNC:14098 HPA:HPA036389
neXtProt:NX_Q9GZL7 PharmGKB:PA37841 InParanoid:Q9GZL7
PhylomeDB:Q9GZL7 GenomeRNAi:55759 NextBio:60775 ArrayExpress:Q9GZL7
Bgee:Q9GZL7 CleanEx:HS_WDR12 Genevestigator:Q9GZL7
GermOnline:ENSG00000138442 Uniprot:Q9GZL7
Length = 423
Score = 189 (71.6 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 61/208 (29%), Positives = 100/208 (48%)
Query: 231 WSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLAT 290
WS + T + + K++ + G+ P+ + SGH+ ++ WS E A+
Sbjct: 216 WSTVPTDEEDEMEESTNRPRKKQKTEQLGLTRTPIVTLSGHMEAVSSVLWSDAEEICSAS 275
Query: 291 GDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVED-LQWSPGEKRVLASCSVDLSIRIWDT 349
D I +W E+G+ + L G N V + + +SP KR LAS S D IR+WD
Sbjct: 276 WD--HTIRVWDV-ESGSLK---STLTG--NKVFNCISYSPLCKR-LASGSTDRHIRLWDP 326
Query: 350 RVINTKSCMLTLPNAHTSDVNVISWNRT-EPLIVSGGDDGCIHVWDLRRFKKGSSVATFK 408
R + L+L +HT V + W+ T E ++SG D + +WD R K + +
Sbjct: 327 RTKDGSLVSLSL-TSHTGWVTSVKWSPTHEQQLISGSLDNIVKLWDTRSCK--APLYDLA 383
Query: 409 HHTAPVTTVEWHPTESSTFASGGADDQI 436
H V +V+W T++ SGGAD+++
Sbjct: 384 AHEDKVLSVDW--TDTGLLLSGGADNKL 409
Score = 187 (70.9 bits), Expect = 7.9e-12, Sum P(2) = 7.9e-12
Identities = 81/294 (27%), Positives = 122/294 (41%)
Query: 180 FAMDWSSTEPGV---LATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQW--SDL 234
F DW S+ G + TG + IW+ + GHT+ +D+ W D
Sbjct: 99 FHDDWISSIKGAEEWILTGSYDKTSRIWSLEGKSIMTIV-----GHTDVVKDVAWVKKDS 153
Query: 235 KTAL---QTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHL--TEGFAMDWSSTEPGVLA 289
+ L ++D L E N +R K L GH + A+D S T+
Sbjct: 154 LSCLLLSASMDQTILLWEWNVERNK-----VKALHCCRGHAGSVDSIAVDGSGTK---FC 205
Query: 290 TGDCKRNIHIWT----------------PREAGAWQ---VDQKPLV---GHTNSVEDLQW 327
+G + + IW+ PR+ + + + P+V GH +V + W
Sbjct: 206 SGSWDKMLKIWSTVPTDEEDEMEESTNRPRKKQKTEQLGLTRTPIVTLSGHMEAVSSVLW 265
Query: 328 SPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDD 387
S E+ + S S D +IR+WD + KS TL N IS++ + SG D
Sbjct: 266 SDAEE--ICSASWDHTIRVWDVESGSLKS---TLTGNKV--FNCISYSPLCKRLASGSTD 318
Query: 388 GCIHVWDLRRFKKGSSVA-TFKHHTAPVTTVEWHPTESSTFASGGADDQIALWD 440
I +WD R K GS V+ + HT VT+V+W PT SG D+ + LWD
Sbjct: 319 RHIRLWDPRT-KDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNIVKLWD 371
Score = 144 (55.7 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 36/104 (34%), Positives = 55/104 (52%)
Query: 288 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIW 347
LA+G R+I +W PR V L HT V ++WSP ++ L S S+D +++W
Sbjct: 312 LASGSTDRHIRLWDPRTKDGSLVSLS-LTSHTGWVTSVKWSPTHEQQLISGSLDNIVKLW 370
Query: 348 DTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIH 391
DTR + K+ + L AH V + W T L++SGG D ++
Sbjct: 371 DTR--SCKAPLYDLA-AHEDKVLSVDWTDTG-LLLSGGADNKLY 410
Score = 132 (51.5 bits), Expect = 6.4e-09, Sum P(2) = 6.4e-09
Identities = 48/184 (26%), Positives = 78/184 (42%)
Query: 586 HRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGP--G 643
H G ++ + G+ +G W ++ K IW D+ + +K+ K G
Sbjct: 188 HAGSVDSIAVDGSGTKFCSGSWDKMLK--IWST-VPTDEEDEMEESTNRPRKKQKTEQLG 244
Query: 644 IPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSVYLYTNR-FG 702
+ P+ + SGH+ ++ WS E A+ D I +W E+G+ L N+ F
Sbjct: 245 LTRTPIVTLSGHMEAVSSVLWSDAEEICSASWD--HTIRVWDV-ESGSLKSTLTGNKVFN 301
Query: 703 V---------LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLAS 753
LA+G R+I +W PR V L HT V ++WSP ++ L S
Sbjct: 302 CISYSPLCKRLASGSTDRHIRLWDPRTKDGSLVSLS-LTSHTGWVTSVKWSPTHEQQLIS 360
Query: 754 CSVD 757
S+D
Sbjct: 361 GSLD 364
Score = 81 (33.6 bits), Expect = 6.4e-09, Sum P(2) = 6.4e-09
Identities = 23/71 (32%), Positives = 32/71 (45%)
Query: 378 EPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESST--FASGGADDQ 435
E I++G D +W L +G S+ T HT V V W +S + S D
Sbjct: 111 EEWILTGSYDKTSRIWSL----EGKSIMTIVGHTDVVKDVAWVKKDSLSCLLLSASMDQT 166
Query: 436 IALWDLAVERD 446
I LW+ VER+
Sbjct: 167 ILLWEWNVERN 177
Score = 50 (22.7 bits), Expect = 7.9e-12, Sum P(2) = 7.9e-12
Identities = 9/35 (25%), Positives = 19/35 (54%)
Query: 648 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIH 682
PL+ + H + ++DW+ T G+L +G ++
Sbjct: 378 PLYDLAAHEDKVLSVDWTDT--GLLLSGGADNKLY 410
>RGD|735072 [details] [associations]
symbol:Wdr12 "WD repeat domain 12" species:10116 "Rattus
norvegicus" [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO;ISS]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO;ISS]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005654 "nucleoplasm"
evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO;ISS]
[GO:0007219 "Notch signaling pathway" evidence=IEA;ISO] [GO:0008283
"cell proliferation" evidence=ISO;ISS] [GO:0030687 "preribosome,
large subunit precursor" evidence=ISO;ISS] [GO:0070545 "PeBoW
complex" evidence=ISO;ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:735072 GO:GO:0005654 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 GO:GO:0000466
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464
OMA:LQTRFFT HAMAP:MF_03029 CTD:55759 GeneTree:ENSGT00640000091456
HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM EMBL:BC063180 IPI:IPI00400751
RefSeq:NP_955442.1 UniGene:Rn.106890 ProteinModelPortal:P61480
STRING:P61480 PRIDE:P61480 Ensembl:ENSRNOT00000023463 GeneID:363237
KEGG:rno:363237 UCSC:RGD:735072 InParanoid:P61480 NextBio:682950
Genevestigator:P61480 GermOnline:ENSRNOG00000017340 Uniprot:P61480
Length = 423
Score = 187 (70.9 bits), Expect = 7.9e-12, Sum P(2) = 7.9e-12
Identities = 80/294 (27%), Positives = 121/294 (41%)
Query: 180 FAMDWSSTEPGV---LATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQW---SD 233
F DW S+ G + +G + IW+ + GHT+ +D+ W
Sbjct: 99 FHDDWISSIKGAEEWILSGSYDKTSRIWSLEGKSIMTIV-----GHTDVVKDVAWVKKDS 153
Query: 234 LKTALQT--VDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHL--TEGFAMDWSSTEPGVLA 289
L L T +D L E N +R K L GH + A+D S T+
Sbjct: 154 LSCLLLTASMDQTILLWEWNIERNK-----VKALHCCRGHAGSVDAIAVDSSGTK---FC 205
Query: 290 TGDCKRNIHIWT----------------PREAGAWQ---VDQKPLV---GHTNSVEDLQW 327
+G + + IW+ PR+ + + + PLV GHT ++ + W
Sbjct: 206 SGSWDKMLKIWSTVPTDEEDEIQEPTNRPRKKQKTEQLGLTRTPLVTLSGHTEAISSVLW 265
Query: 328 SPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDD 387
S ++ + S S D ++R+WD KS TL N IS++ + SG D
Sbjct: 266 SDADE--VCSASWDHTVRVWDVESGGLKS---TLTGNKV--FNCISYSPLCKRLASGSTD 318
Query: 388 GCIHVWDLRRFKKGSSVA-TFKHHTAPVTTVEWHPTESSTFASGGADDQIALWD 440
I +WD R K GS V+ + HT VT+V+W PT SG D+ + LWD
Sbjct: 319 RHIRLWDPRT-KDGSLVSLSLTSHTGWVTSVKWSPTHDQQLISGSLDNMVKLWD 371
Score = 185 (70.2 bits), Expect = 4.8e-11, P = 4.8e-11
Identities = 61/210 (29%), Positives = 100/210 (47%)
Query: 231 WSDLKTALQT-VDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFA-MDWSSTEPGVL 288
WS + T + + +P K++ + G+ PL + SGH TE + + WS +
Sbjct: 216 WSTVPTDEEDEIQEPTN-RPRKKQKTEQLGLTRTPLVTLSGH-TEAISSVLWSDADEVCS 273
Query: 289 ATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVED-LQWSPGEKRVLASCSVDLSIRIW 347
A+ D + +W G + L G N V + + +SP KR LAS S D IR+W
Sbjct: 274 ASWD--HTVRVWDVESGGL----KSTLTG--NKVFNCISYSPLCKR-LASGSTDRHIRLW 324
Query: 348 DTRVINTKSCMLTLPNAHTSDVNVISWNRT-EPLIVSGGDDGCIHVWDLRRFKKGSSVAT 406
D R + L+L +HT V + W+ T + ++SG D + +WD R K + +
Sbjct: 325 DPRTKDGSLVSLSL-TSHTGWVTSVKWSPTHDQQLISGSLDNMVKLWDTRSCK--APLYD 381
Query: 407 FKHHTAPVTTVEWHPTESSTFASGGADDQI 436
H V +V+W T++ SGGAD+++
Sbjct: 382 LAAHEDKVLSVDW--TDTGLLLSGGADNKL 409
Score = 143 (55.4 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 36/104 (34%), Positives = 54/104 (51%)
Query: 288 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIW 347
LA+G R+I +W PR V L HT V ++WSP + L S S+D +++W
Sbjct: 312 LASGSTDRHIRLWDPRTKDGSLVSLS-LTSHTGWVTSVKWSPTHDQQLISGSLDNMVKLW 370
Query: 348 DTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIH 391
DTR + K+ + L AH V + W T L++SGG D ++
Sbjct: 371 DTR--SCKAPLYDLA-AHEDKVLSVDWTDTG-LLLSGGADNKLY 410
Score = 129 (50.5 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 49/185 (26%), Positives = 75/185 (40%)
Query: 586 HRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHN-KKRGKGP-- 642
H G ++ + G+ +G W ++ K IW T +D Q + +K+ K
Sbjct: 188 HAGSVDAIAVDSSGTKFCSGSWDKMLK--IWS--TVPTDEEDEIQEPTNRPRKKQKTEQL 243
Query: 643 GIPTPPLFSFSGHLTEGFA-MDWSSTEPGVLATGDCKRNIHIWTPREAGAWSVYLYTNRF 701
G+ PL + SGH TE + + WS + A+ D + +W G S F
Sbjct: 244 GLTRTPLVTLSGH-TEAISSVLWSDADEVCSASWD--HTVRVWDVESGGLKSTLTGNKVF 300
Query: 702 GV---------LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLA 752
LA+G R+I +W PR V L HT V ++WSP + L
Sbjct: 301 NCISYSPLCKRLASGSTDRHIRLWDPRTKDGSLVSLS-LTSHTGWVTSVKWSPTHDQQLI 359
Query: 753 SCSVD 757
S S+D
Sbjct: 360 SGSLD 364
Score = 80 (33.2 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 22/71 (30%), Positives = 32/71 (45%)
Query: 378 EPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESST--FASGGADDQ 435
E I+SG D +W L +G S+ T HT V V W +S + + D
Sbjct: 111 EEWILSGSYDKTSRIWSL----EGKSIMTIVGHTDVVKDVAWVKKDSLSCLLLTASMDQT 166
Query: 436 IALWDLAVERD 446
I LW+ +ER+
Sbjct: 167 ILLWEWNIERN 177
Score = 50 (22.7 bits), Expect = 7.9e-12, Sum P(2) = 7.9e-12
Identities = 9/35 (25%), Positives = 19/35 (54%)
Query: 648 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIH 682
PL+ + H + ++DW+ T G+L +G ++
Sbjct: 378 PLYDLAAHEDKVLSVDWTDT--GLLLSGGADNKLY 410
>UNIPROTKB|E1BYP4 [details] [associations]
symbol:PEX7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001764 "neuron migration" evidence=IEA] [GO:0001958
"endochondral ossification" evidence=IEA] [GO:0005053 "peroxisome
matrix targeting signal-2 binding" evidence=IEA] [GO:0005782
"peroxisomal matrix" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006635 "fatty acid beta-oxidation" evidence=IEA]
[GO:0008611 "ether lipid biosynthetic process" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782
GO:GO:0008611 GO:GO:0016558 KO:K13341 OMA:GHEYAVR CTD:5191
GO:GO:0005053 GeneTree:ENSGT00700000104578 EMBL:AADN02025502
EMBL:AADN02025503 IPI:IPI00583820 RefSeq:XP_419724.3
UniGene:Gga.10547 ProteinModelPortal:E1BYP4
Ensembl:ENSGALT00000022499 GeneID:421687 KEGG:gga:421687
Uniprot:E1BYP4
Length = 321
Score = 188 (71.2 bits), Expect = 8.8e-12, P = 8.8e-12
Identities = 51/184 (27%), Positives = 82/184 (44%)
Query: 261 PTPPLFSFSGHLTEGFAMDWSSTE-PGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHT 319
P PL + H E +++DWS T ++ +G + +W P G + GH
Sbjct: 98 PKGPLQVYKEHTQEAYSVDWSQTRGEQLVVSGSWDQTAKLWDPA-VGK---SLRTFKGHE 153
Query: 320 NSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR-TE 378
+ WSP AS S D ++RIWD + + L +P AH +++ W + E
Sbjct: 154 GVIYSTIWSPHIPGCFASASGDQTLRIWDVKAPGVR---LVIP-AHQAEILSCDWCKYDE 209
Query: 379 PLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIAL 438
L+V+G D + WDLR ++ V HT V V++ P ++ AS D +
Sbjct: 210 NLLVTGAVDCSLKGWDLRNVRQ--PVFILLGHTYAVRRVKFSPFHATLLASCSYDFTVRF 267
Query: 439 WDLA 442
WD +
Sbjct: 268 WDFS 271
Score = 163 (62.4 bits), Expect = 6.3e-09, P = 6.3e-09
Identities = 39/120 (32%), Positives = 58/120 (48%)
Query: 324 DLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRT--EPLI 381
D+ WS + VL + S D S++IWD + K L + HT + + W++T E L+
Sbjct: 70 DVTWSENNEHVLITSSGDGSLQIWD--IAKPKG-PLQVYKEHTQEAYSVDWSQTRGEQLV 126
Query: 382 VSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDL 441
VSG D +WD G S+ TFK H + + W P FAS D + +WD+
Sbjct: 127 VSGSWDQTAKLWDPA---VGKSLRTFKGHEGVIYSTIWSPHIPGCFASASGDQTLRIWDV 183
Score = 145 (56.1 bits), Expect = 6.6e-07, P = 6.6e-07
Identities = 55/234 (23%), Positives = 89/234 (38%)
Query: 180 FAMDWSSTEPGVLATGDCKRNIHIWT-PREAGAWQVDQKPLGGHTNSAEDLQWSDLKTAL 238
F + WS VL T ++ IW + G QV ++ HT A + WS +
Sbjct: 69 FDVTWSENNEHVLITSSGDGSLQIWDIAKPKGPLQVYKE----HTQEAYSVDWSQTRGEQ 124
Query: 239 QTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIH 298
V + G + T F GH ++ WS PG A+ + +
Sbjct: 125 LVVSGSWDQTAKLWDPAVGKSLRT-----FKGHEGVIYSTIWSPHIPGCFASASGDQTLR 179
Query: 299 IWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCM 358
IW + G V + H + W ++ +L + +VD S++ WD R N + +
Sbjct: 180 IWDVKAPGVRLV----IPAHQAEILSCDWCKYDENLLVTGAVDCSLKGWDLR--NVRQPV 233
Query: 359 LTLPNAHTSDVNVISWNRTEP-LIVSGGDDGCIHVWDLRRFKKGSSVATFKHHT 411
L HT V + ++ L+ S D + WD K + T +HHT
Sbjct: 234 FILLG-HTYAVRRVKFSPFHATLLASCSYDFTVRFWDFS--KPNPLLETVEHHT 284
Score = 140 (54.3 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 47/189 (24%), Positives = 76/189 (40%)
Query: 165 PTPPLFSFSGHLTEGFAMDWSSTE-PGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHT 223
P PL + H E +++DWS T ++ +G + +W P G + GH
Sbjct: 98 PKGPLQVYKEHTQEAYSVDWSQTRGEQLVVSGSWDQTAKLWDPA-VGK---SLRTFKGHE 153
Query: 224 NSAEDLQWSD-LKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSS 282
WS + + L + K PG+ H E + DW
Sbjct: 154 GVIYSTIWSPHIPGCFASASGDQTLRIWDVK---APGVR----LVIPAHQAEILSCDWCK 206
Query: 283 TEPGVLATGDCKRNIHIWTPREAGAWQVDQKP---LVGHTNSVEDLQWSPGEKRVLASCS 339
+ +L TG ++ W R ++P L+GHT +V +++SP +LASCS
Sbjct: 207 YDENLLVTGAVDCSLKGWDLRNV------RQPVFILLGHTYAVRRVKFSPFHATLLASCS 260
Query: 340 VDLSIRIWD 348
D ++R WD
Sbjct: 261 YDFTVRFWD 269
Score = 112 (44.5 bits), Expect = 8.8e-09, Sum P(2) = 8.8e-09
Identities = 23/74 (31%), Positives = 39/74 (52%)
Query: 372 ISWNRT-EPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASG 430
++W+ E ++++ DG + +WD+ + KG + +K HT +V+W T
Sbjct: 71 VTWSENNEHVLITSSGDGSLQIWDIAK-PKGP-LQVYKEHTQEAYSVDWSQTRGEQLVVS 128
Query: 431 GADDQIA-LWDLAV 443
G+ DQ A LWD AV
Sbjct: 129 GSWDQTAKLWDPAV 142
Score = 97 (39.2 bits), Expect = 8.8e-09, Sum P(2) = 8.8e-09
Identities = 32/118 (27%), Positives = 56/118 (47%)
Query: 649 LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSVYLYTNRFGVLATGD 708
L +F GH ++ WS PG A+ + + IW + G V + ++ +L+
Sbjct: 146 LRTFKGHEGVIYSTIWSPHIPGCFASASGDQTLRIWDVKAPGVRLV-IPAHQAEILSCDW 204
Query: 709 CK--RNIHIWTPREAG--AWQVD--QKP---LVGHTNSVEDLQWSPGEKRVLASCSVD 757
CK N+ + + W + ++P L+GHT +V +++SP +LASCS D
Sbjct: 205 CKYDENLLVTGAVDCSLKGWDLRNVRQPVFILLGHTYAVRRVKFSPFHATLLASCSYD 262
>UNIPROTKB|Q5REE6 [details] [associations]
symbol:WDR12 "Ribosome biogenesis protein WDR12"
species:9601 "Pongo abelii" [GO:0000463 "maturation of LSU-rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS] [GO:0005730
"nucleolus" evidence=ISS] [GO:0008283 "cell proliferation"
evidence=ISS] [GO:0030687 "preribosome, large subunit precursor"
evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 HSSP:P16649
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 KO:K14863
HOGENOM:HOG000264464 OMA:LQTRFFT HAMAP:MF_03029 CTD:55759
GeneTree:ENSGT00640000091456 HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM
EMBL:CR857583 RefSeq:NP_001124867.1 UniGene:Pab.3253
ProteinModelPortal:Q5REE6 Ensembl:ENSPPYT00000015218
GeneID:100171729 KEGG:pon:100171729 InParanoid:Q5REE6
Uniprot:Q5REE6
Length = 423
Score = 188 (71.2 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 61/208 (29%), Positives = 100/208 (48%)
Query: 231 WSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLAT 290
WS + T + + K++ + G+ P+ + SGH+ ++ WS E A+
Sbjct: 216 WSTVPTDEEDEMEESTNRPRKKQKTEQLGLTRTPVVTLSGHMEAVSSVLWSDAEEICSAS 275
Query: 291 GDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVED-LQWSPGEKRVLASCSVDLSIRIWDT 349
D I +W E+G+ + L G N V + + +SP KR LAS S D IR+WD
Sbjct: 276 WD--HTIRVWDV-ESGSLK---STLTG--NKVFNCISYSPLCKR-LASGSTDRHIRLWDP 326
Query: 350 RVINTKSCMLTLPNAHTSDVNVISWNRT-EPLIVSGGDDGCIHVWDLRRFKKGSSVATFK 408
R + L+L +HT V + W+ T E ++SG D + +WD R K + +
Sbjct: 327 RTKDGSLVSLSL-TSHTGWVTSVKWSPTHEQQLISGSLDNIVKLWDTRSCK--APLYDLA 383
Query: 409 HHTAPVTTVEWHPTESSTFASGGADDQI 436
H V +V+W T++ SGGAD+++
Sbjct: 384 AHEDKVLSVDW--TDTGLLLSGGADNKL 409
Score = 186 (70.5 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 81/294 (27%), Positives = 122/294 (41%)
Query: 180 FAMDWSSTEPGV---LATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQW--SDL 234
F DW S+ G + TG + IW+ + GHT+ +D+ W D
Sbjct: 99 FHDDWISSIKGAEEWILTGSYDKTSRIWSLEGKSIMTIV-----GHTDVVKDVAWVKKDS 153
Query: 235 KTAL---QTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHL--TEGFAMDWSSTEPGVLA 289
+ L ++D L E N +R K L GH + A+D S T+
Sbjct: 154 LSCLLLSASMDQTILLWEWNVERNK-----VKALHCCRGHAGSVDSIAVDGSGTK---FC 205
Query: 290 TGDCKRNIHIWT----------------PREAGAWQ---VDQKPLV---GHTNSVEDLQW 327
+G + + IW+ PR+ + + + P+V GH +V + W
Sbjct: 206 SGSWDKMLKIWSTVPTDEEDEMEESTNRPRKKQKTEQLGLTRTPVVTLSGHMEAVSSVLW 265
Query: 328 SPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDD 387
S E+ + S S D +IR+WD + KS TL N IS++ + SG D
Sbjct: 266 SDAEE--ICSASWDHTIRVWDVESGSLKS---TLTGNKV--FNCISYSPLCKRLASGSTD 318
Query: 388 GCIHVWDLRRFKKGSSVA-TFKHHTAPVTTVEWHPTESSTFASGGADDQIALWD 440
I +WD R K GS V+ + HT VT+V+W PT SG D+ + LWD
Sbjct: 319 RHIRLWDPRT-KDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNIVKLWD 371
Score = 144 (55.7 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 36/104 (34%), Positives = 55/104 (52%)
Query: 288 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIW 347
LA+G R+I +W PR V L HT V ++WSP ++ L S S+D +++W
Sbjct: 312 LASGSTDRHIRLWDPRTKDGSLVSLS-LTSHTGWVTSVKWSPTHEQQLISGSLDNIVKLW 370
Query: 348 DTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIH 391
DTR + K+ + L AH V + W T L++SGG D ++
Sbjct: 371 DTR--SCKAPLYDLA-AHEDKVLSVDWTDTG-LLLSGGADNKLY 410
Score = 131 (51.2 bits), Expect = 8.2e-09, Sum P(2) = 8.2e-09
Identities = 48/184 (26%), Positives = 78/184 (42%)
Query: 586 HRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGP--G 643
H G ++ + G+ +G W ++ K IW D+ + +K+ K G
Sbjct: 188 HAGSVDSIAVDGSGTKFCSGSWDKMLK--IWST-VPTDEEDEMEESTNRPRKKQKTEQLG 244
Query: 644 IPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSVYLYTNR-FG 702
+ P+ + SGH+ ++ WS E A+ D I +W E+G+ L N+ F
Sbjct: 245 LTRTPVVTLSGHMEAVSSVLWSDAEEICSASWD--HTIRVWDV-ESGSLKSTLTGNKVFN 301
Query: 703 V---------LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLAS 753
LA+G R+I +W PR V L HT V ++WSP ++ L S
Sbjct: 302 CISYSPLCKRLASGSTDRHIRLWDPRTKDGSLVSLS-LTSHTGWVTSVKWSPTHEQQLIS 360
Query: 754 CSVD 757
S+D
Sbjct: 361 GSLD 364
Score = 81 (33.6 bits), Expect = 8.2e-09, Sum P(2) = 8.2e-09
Identities = 23/71 (32%), Positives = 32/71 (45%)
Query: 378 EPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESST--FASGGADDQ 435
E I++G D +W L +G S+ T HT V V W +S + S D
Sbjct: 111 EEWILTGSYDKTSRIWSL----EGKSIMTIVGHTDVVKDVAWVKKDSLSCLLLSASMDQT 166
Query: 436 IALWDLAVERD 446
I LW+ VER+
Sbjct: 167 ILLWEWNVERN 177
Score = 50 (22.7 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 9/35 (25%), Positives = 19/35 (54%)
Query: 648 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIH 682
PL+ + H + ++DW+ T G+L +G ++
Sbjct: 378 PLYDLAAHEDKVLSVDWTDT--GLLLSGGADNKLY 410
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 189 (71.6 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 56/175 (32%), Positives = 82/175 (46%)
Query: 267 SFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQ 326
+ +GH WS+ ++ D K + I+ E ++ K L GHTN V
Sbjct: 116 TLTGHKLGVNDFAWSADSKSIVTASDDK-TLKIY---EVPTVKM-AKTLKGHTNYVFCCN 170
Query: 327 WSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGD 386
++P + ++ S S D S+RIWD R T C+ TLP AH+ V+ +S+NR LI SG
Sbjct: 171 FNP-QSSLVVSGSFDESVRIWDVR---TGMCVKTLP-AHSDPVSAVSFNRDGSLITSGSY 225
Query: 387 DGCIHVWDLRRFKKGSSVATF-KHHTAPVTTVEWHPTESSTFASGGADDQIALWD 440
DG + +WD G V T PV V++ P S D+ + LWD
Sbjct: 226 DGLVRIWDTAN---GQCVKTLVDDENPPVAFVKFSPN-GKYILSSNLDNTLKLWD 276
Score = 173 (66.0 bits), Expect = 7.1e-10, P = 7.1e-10
Identities = 50/185 (27%), Positives = 82/185 (44%)
Query: 258 PGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVG 317
PG + + GH A+ +S L T + + IW + ++ L G
Sbjct: 65 PGAGYKLISTIEGHTKSISAVKFSPCGK-FLGTSSADKTVKIWNMSDLSC----ERTLTG 119
Query: 318 HTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRT 377
H V D WS K ++ + S D +++I++ + T TL HT+ V ++N
Sbjct: 120 HKLGVNDFAWSADSKSIVTA-SDDKTLKIYE---VPTVKMAKTL-KGHTNYVFCCNFNPQ 174
Query: 378 EPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIA 437
L+VSG D + +WD+R G V T H+ PV+ V ++ + S SG D +
Sbjct: 175 SSLVVSGSFDESVRIWDVRT---GMCVKTLPAHSDPVSAVSFN-RDGSLITSGSYDGLVR 230
Query: 438 LWDLA 442
+WD A
Sbjct: 231 IWDTA 235
Score = 125 (49.1 bits), Expect = 0.00015, P = 0.00015
Identities = 53/240 (22%), Positives = 95/240 (39%)
Query: 162 PGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGG 221
PG + + GH A+ +S L T + + IW + ++ L G
Sbjct: 65 PGAGYKLISTIEGHTKSISAVKFSPCGK-FLGTSSADKTVKIWNMSDLSC----ERTLTG 119
Query: 222 HTNSAEDLQWS-DLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLF-SFSGHLTEGFAMD 279
H D WS D K+ + DD K K +PT + + GH F +
Sbjct: 120 HKLGVNDFAWSADSKSIVTASDD---------KTLKIYEVPTVKMAKTLKGHTNYVFCCN 170
Query: 280 WSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCS 339
++ + ++ +G ++ IW R + K L H++ V + ++ + ++ S S
Sbjct: 171 FNP-QSSLVVSGSFDESVRIWDVRTG----MCVKTLPAHSDPVSAVSFNR-DGSLITSGS 224
Query: 340 VDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFK 399
D +RIWDT C+ TL + V + ++ I+S D + +WD + K
Sbjct: 225 YDGLVRIWDTA---NGQCVKTLVDDENPPVAFVKFSPNGKYILSSNLDNTLKLWDFGKGK 281
>UNIPROTKB|Q32PJ6 [details] [associations]
symbol:CIAO1 "Probable cytosolic iron-sulfur protein
assembly protein CIAO1" species:9913 "Bos taurus" [GO:0097361 "CIA
complex" evidence=ISS] [GO:0071817 "MMXD complex" evidence=ISS]
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
[GO:0007059 "chromosome segregation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226 GO:GO:0071817
HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:BC108091 IPI:IPI00699811
RefSeq:NP_001032559.1 RefSeq:XP_003585196.1 UniGene:Bt.51463
ProteinModelPortal:Q32PJ6 STRING:Q32PJ6 Ensembl:ENSBTAT00000020797
GeneID:100850134 GeneID:540069 KEGG:bta:100850134 KEGG:bta:540069
CTD:9391 GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532
InParanoid:Q32PJ6 OrthoDB:EOG4MCX0N NextBio:20878397 GO:GO:0097361
Uniprot:Q32PJ6
Length = 339
Score = 171 (65.3 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 68/256 (26%), Positives = 108/256 (42%)
Query: 287 VLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRI 346
+LA+ R++ IW RE +W GH +V + WSP LAS S D + I
Sbjct: 30 LLASCGGDRSVRIWG-REGDSWICKSVLCEGHQRTVRKVAWSPCGN-YLASASFDATTCI 87
Query: 347 WDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVAT 406
W + + C+ TL H ++V ++W + L+ + D + VW++ + V+
Sbjct: 88 WKKNEDDFE-CVTTL-EGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSV 145
Query: 407 FKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERD----SEIEQREAELKDL--- 459
HT V V WHP++ AS DD + L+ E D + +E E+ + L
Sbjct: 146 LNSHTQDVKHVVWHPSQE-LLASASYDDTVKLYR-EEEDDWVCCATLEGHESTVWSLAFD 203
Query: 460 PSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNI-FRTISDLPSQLLFIHLGQKEIK 518
PS + W LPG A SG ++ + L H + I
Sbjct: 204 PSGQRLASCSDDRTVRI-WRQYLPGNEQGVACSGSEASWKCVCTLSG----FH--SRTIY 256
Query: 519 ELHWHPQLPGTIISTA 534
++ W QL GT+ +TA
Sbjct: 257 DVAWC-QLTGTL-ATA 270
Score = 140 (54.3 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
Identities = 73/328 (22%), Positives = 136/328 (41%)
Query: 191 VLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEH 250
+LA+ R++ IW RE +W GH + + WS L +
Sbjct: 30 LLASCGGDRSVRIWG-REGDSWICKSVLCEGHQRTVRKVAWSPCGNYLASASFDATTCIW 88
Query: 251 NKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQV 310
K + T GH E ++ W+ + +LAT C R+ +W W+V
Sbjct: 89 KKNEDDFECVTT-----LEGHENEVKSVAWAPSG-NLLAT--CSRDKSVWV------WEV 134
Query: 311 DQKP-------LVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPN 363
D++ L HT V+ + W P ++ +LAS S D +++++ + C TL
Sbjct: 135 DEEDEYECVSVLNSHTQDVKHVVWHPSQE-LLASASYDDTVKLYREEE-DDWVCCATL-E 191
Query: 364 AHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGS--------SVATFK------- 408
H S V ++++ + + S DD + +W R++ G+ S A++K
Sbjct: 192 GHESTVWSLAFDPSGQRLASCSDDRTVRIW--RQYLPGNEQGVACSGSEASWKCVCTLSG 249
Query: 409 HHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHL 468
H+ + V W + T A+ DD I ++ E D + ++ P+ L H+
Sbjct: 250 FHSRTIYDVAWCQL-TGTLATACGDDAIRVF----EEDPGSDPQQ------PTFSLTAHV 298
Query: 469 GQKEIKELH---WHPQLPGTIISTANSG 493
Q ++++ W+P+ G + S ++ G
Sbjct: 299 PQAHSQDVNCVAWNPKERGLLASCSDDG 326
Score = 61 (26.5 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 734 HTNSVEDLQWSPGEKRVLASCSVD 757
H+ V + W+P E+ +LASCS D
Sbjct: 302 HSQDVNCVAWNPKERGLLASCSDD 325
Score = 54 (24.1 bits), Expect = 6.1e-11, Sum P(2) = 6.1e-11
Identities = 14/49 (28%), Positives = 22/49 (44%)
Query: 642 PGI-PTPPLFSFSGHLTEGFAMD-----WSSTEPGVLATGDCKRNIHIW 684
PG P P FS + H+ + + D W+ E G+LA+ + W
Sbjct: 283 PGSDPQQPTFSLTAHVPQAHSQDVNCVAWNPKERGLLASCSDDGELAFW 331
>UNIPROTKB|Q08DL6 [details] [associations]
symbol:PEX7 "Peroxisomal biogenesis factor 7" species:9913
"Bos taurus" [GO:0008611 "ether lipid biosynthetic process"
evidence=ISS] [GO:0016558 "protein import into peroxisome matrix"
evidence=ISS] [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005782 "peroxisomal matrix"
evidence=IEA] [GO:0001958 "endochondral ossification" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 GO:GO:0001764
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006635 GO:GO:0005782 GO:GO:0008611 GO:GO:0016558
GO:GO:0001958 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 GeneTree:ENSGT00700000104578
OrthoDB:EOG483D4V EMBL:DAAA02026741 EMBL:BC123679 IPI:IPI00715205
RefSeq:NP_001070358.1 UniGene:Bt.17803 STRING:Q08DL6
Ensembl:ENSBTAT00000022338 GeneID:533077 KEGG:bta:533077
InParanoid:Q08DL6 NextBio:20875902 Uniprot:Q08DL6
Length = 323
Score = 187 (70.9 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 50/183 (27%), Positives = 84/183 (45%)
Query: 262 TPPLFSFSGHLTEGFAMDWSSTE-PGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTN 320
T PL F H E +++DWS T ++ +G + + +W P + + GH +
Sbjct: 101 TGPLQVFKEHTQEVYSVDWSQTRGEQLVVSGSWDQTVKLWDPTVGKSLCTFR----GHES 156
Query: 321 SVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR-TEP 379
+ WSP AS S D ++RIWD + T + +P AH +++ W + E
Sbjct: 157 VIYSTIWSPHIPGCFASSSGDQTLRIWD---VKTTGVRIVVP-AHQAEILSCDWCKYNEN 212
Query: 380 LIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALW 439
L+V+G D + WDLR ++ V HT + V++ P +S AS D + W
Sbjct: 213 LVVTGAVDCSLRGWDLRNVQQ--PVFELLGHTYAIRRVKFSPFHASVLASCSYDFTVRFW 270
Query: 440 DLA 442
+ +
Sbjct: 271 NFS 273
Score = 179 (68.1 bits), Expect = 9.8e-11, P = 9.8e-11
Identities = 39/120 (32%), Positives = 62/120 (51%)
Query: 324 DLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRT--EPLI 381
D+ WS + VL +CS D S+++WDT + L + HT +V + W++T E L+
Sbjct: 72 DVTWSENNEHVLVTCSGDGSLQLWDTA---RATGPLQVFKEHTQEVYSVDWSQTRGEQLV 128
Query: 382 VSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDL 441
VSG D + +WD G S+ TF+ H + + + W P FAS D + +WD+
Sbjct: 129 VSGSWDQTVKLWDPT---VGKSLCTFRGHESVIYSTIWSPHIPGCFASSSGDQTLRIWDV 185
Score = 137 (53.3 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 57/263 (21%), Positives = 102/263 (38%)
Query: 180 FAMDWSSTEPGVLATGDCKRNIHIW-TPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTAL 238
F + WS VL T ++ +W T R G QV ++ HT + WS +
Sbjct: 71 FDVTWSENNEHVLVTCSGDGSLQLWDTARATGPLQVFKE----HTQEVYSVDWSQTRGEQ 126
Query: 239 QTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIH 298
V + + K P + L +F GH + ++ WS PG A+ + +
Sbjct: 127 LVVSGSW---DQTVKLWD-PTVGKS-LCTFRGHESVIYSTIWSPHIPGCFASSSGDQTLR 181
Query: 299 IWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCM 358
IW + G V + H + W + ++ + +VD S+R WD R N + +
Sbjct: 182 IWDVKTTGVRIV----VPAHQAEILSCDWCKYNENLVVTGAVDCSLRGWDLR--NVQQPV 235
Query: 359 LTLPNAHTSDVNVISWNRTEP-LIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTV 417
L HT + + ++ ++ S D + W+ K + T +HHT +
Sbjct: 236 FELLG-HTYAIRRVKFSPFHASVLASCSYDFTVRFWNFS--KPDPLLETVEHHTEFTCGL 292
Query: 418 EWHPTESSTFASGGADDQIALWD 440
+ + A D+ I ++D
Sbjct: 293 DLSLQSPTQVADCAWDETIKIYD 315
Score = 135 (52.6 bits), Expect = 8.8e-06, P = 8.8e-06
Identities = 45/184 (24%), Positives = 72/184 (39%)
Query: 166 TPPLFSFSGHLTEGFAMDWSSTE-PGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTN 224
T PL F H E +++DWS T ++ +G + + +W P + + GH +
Sbjct: 101 TGPLQVFKEHTQEVYSVDWSQTRGEQLVVSGSWDQTVKLWDPTVGKSLCTFR----GHES 156
Query: 225 SAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTE 284
WS Q + G I P H E + DW
Sbjct: 157 VIYSTIWSPHIPGCFASSSGDQTLRIWDVKTTGVRIVVP------AHQAEILSCDWCKYN 210
Query: 285 PGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSI 344
++ TG ++ W R Q L+GHT ++ +++SP VLASCS D ++
Sbjct: 211 ENLVVTGAVDCSLRGWDLRNV---QQPVFELLGHTYAIRRVKFSPFHASVLASCSYDFTV 267
Query: 345 RIWD 348
R W+
Sbjct: 268 RFWN 271
>ZFIN|ZDB-GENE-040426-839 [details] [associations]
symbol:ciao1 "cytosolic iron-sulfur protein
assembly 1 homolog (S. cerevisiae)" species:7955 "Danio rerio"
[GO:0003674 "molecular_function" evidence=ND] [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] [GO:0097361 "CIA
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-839 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT HSSP:P63005 CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:BX323451 EMBL:BC044534 EMBL:BC065658
EMBL:BC171538 EMBL:BC171540 IPI:IPI00496663 RefSeq:NP_956441.2
UniGene:Dr.83731 ProteinModelPortal:Q6P0D9 STRING:Q6P0D9
PRIDE:Q6P0D9 Ensembl:ENSDART00000082256 GeneID:795104
KEGG:dre:795104 InParanoid:Q6P0D9 NextBio:20932107 Bgee:Q6P0D9
Uniprot:Q6P0D9
Length = 330
Score = 172 (65.6 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 48/165 (29%), Positives = 76/165 (46%)
Query: 288 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIW 347
LAT R I IW +E +W+ GH +V + WSP K LAS S D + IW
Sbjct: 31 LATCGGDRAIRIWG-KEGDSWECKCVLSDGHQRTVRKVAWSPCGK-YLASASFDATTCIW 88
Query: 348 DTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATF 407
+ C LT+ H ++V ++W + L+ + D + +W++ + ++
Sbjct: 89 K-KTDEDFEC-LTVLEGHENEVKCVAWAPSGSLLATCSRDKSVWIWEVDEEDEYECLSVV 146
Query: 408 KHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQR 452
HT V V WHPT+ AS D++I ++ E D + E R
Sbjct: 147 NSHTQDVKHVVWHPTQE-LLASASYDNKICIYK---EEDDDWECR 187
Score = 143 (55.4 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 51/173 (29%), Positives = 76/173 (43%)
Query: 280 WSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCS 339
W T+ +LA+ I I+ E W+ + L GH ++V L + P E R LASCS
Sbjct: 158 WHPTQE-LLASASYDNKICIYK-EEDDDWEC-RATLEGHESTVWSLTFDP-EGRRLASCS 213
Query: 340 VDLSIRIWDTRVINTKS------CMLTLPNAHTSDVNVISWNR-TEPLIVSGGDDGCIHV 392
D +++IW S C+ TL H + I+W R T L + GDDG + V
Sbjct: 214 DDRTVKIWKESTTGDGSSDESWKCICTLSGFHGRTIYDIAWCRLTGALATACGDDG-VRV 272
Query: 393 W--DLRRFKKGSSVATFKH----HTAPVTTVEWHPTESSTFASGGADDQIALW 439
+ D + A H H V V W+P E+ A+ + + A+W
Sbjct: 273 FSEDPTADPEQPIFALSAHVPKAHNQDVNCVSWNPKEAGLLATCSDNGEFAIW 325
Score = 108 (43.1 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 33/146 (22%), Positives = 60/146 (41%)
Query: 335 LASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWD 394
LA+C D +IRIW ++ C L + H V ++W+ + S D +W
Sbjct: 31 LATCGGDRAIRIWGKEG-DSWECKCVLSDGHQRTVRKVAWSPCGKYLASASFDATTCIWK 89
Query: 395 LRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREA 454
+ + + + H V V W P+ S A+ D + +W+ V+ + E E
Sbjct: 90 -KTDEDFECLTVLEGHENEVKCVAWAPS-GSLLATCSRDKSVWIWE--VDEEDEYEC--- 142
Query: 455 ELKDLPSQLLFIHLGQKEIKELHWHP 480
L ++ +++K + WHP
Sbjct: 143 --------LSVVNSHTQDVKHVVWHP 160
Score = 68 (29.0 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 22/60 (36%), Positives = 32/60 (53%)
Query: 703 VLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRI 762
+LA+ I I+ E W+ + L GH ++V L + P E R LASCS DR+ +I
Sbjct: 164 LLASASYDNKICIYK-EEDDDWEC-RATLEGHESTVWSLTFDP-EGRRLASCSDDRTVKI 220
Score = 59 (25.8 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 14/45 (31%), Positives = 20/45 (44%)
Query: 645 PTPPLFSFSGHLTEGFAMD-----WSSTEPGVLATGDCKRNIHIW 684
P P+F+ S H+ + D W+ E G+LAT IW
Sbjct: 281 PEQPIFALSAHVPKAHNQDVNCVSWNPKEAGLLATCSDNGEFAIW 325
Score = 52 (23.4 bits), Expect = 6.2e-11, Sum P(2) = 6.2e-11
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 734 HTNSVEDLQWSPGEKRVLASCS 755
H V + W+P E +LA+CS
Sbjct: 296 HNQDVNCVSWNPKEAGLLATCS 317
>SGD|S000000668 [details] [associations]
symbol:RSA4 "WD-repeat protein involved in ribosome
biogenesis" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005840 "ribosome" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000000668 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GeneTree:ENSGT00690000102167 GO:GO:0000027 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 OrthoDB:EOG4PP1R9 EMBL:AY692666
PIR:S19487 RefSeq:NP_009997.2 ProteinModelPortal:P25382 SMR:P25382
DIP:DIP-5365N IntAct:P25382 MINT:MINT-531710 STRING:P25382
PaxDb:P25382 PeptideAtlas:P25382 EnsemblFungi:YCR072C GeneID:850435
KEGG:sce:YCR072C CYGD:YCR072c NextBio:966027 Genevestigator:P25382
GermOnline:YCR072C Uniprot:P25382
Length = 515
Score = 182 (69.1 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 48/153 (31%), Positives = 73/153 (47%)
Query: 264 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVE 323
P+ + GH + WS + V+ATG I +W P+ +G D L GH+ +
Sbjct: 178 PMHTLKGHYNWVLCVSWSP-DGEVIATGSMDNTIRLWDPK-SGQCLGDA--LRGHSKWIT 233
Query: 324 DLQWSP------GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRT 377
L W P G K LAS S D +I+IWDT ++ C T+ + HT+ V+ + W
Sbjct: 234 SLSWEPIHLVKPGSKPRLASSSKDGTIKIWDTV---SRVCQYTM-SGHTNSVSCVKWGG- 288
Query: 378 EPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHH 410
+ L+ SG D + VWD+ +G + K H
Sbjct: 289 QGLLYSGSHDRTVRVWDIN--SQGRCINILKSH 319
Score = 146 (56.5 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 49/162 (30%), Positives = 75/162 (46%)
Query: 281 SSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLV---GHTNSVEDLQWSPGEKRVLAS 337
+S E V A+ D + +W P ++ KP+ GH V + +SP + R + S
Sbjct: 369 NSEEMMVTASDDY--TMFLWNPLKS------TKPIARMTGHQKLVNHVAFSP-DGRYIVS 419
Query: 338 CSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRR 397
S D SI++WD R + K ++ H + V ++W+ L+VS D + VWD+R
Sbjct: 420 ASFDNSIKLWDGR--DGK--FISTFRGHVASVYQVAWSSDCRLLVSCSKDTTLKVWDVRT 475
Query: 398 FKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALW 439
K SV H V TV+W + SGG D + LW
Sbjct: 476 RKL--SV-DLPGHKDEVYTVDWS-VDGKRVCSGGKDKMVRLW 513
Score = 139 (54.0 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 44/149 (29%), Positives = 68/149 (45%)
Query: 305 AGAWQVD-QKP---LVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLT 360
A W D Q P L GH N V + WSP + V+A+ S+D +IR+WD + + C+
Sbjct: 168 ARIWDCDTQTPMHTLKGHYNWVLCVSWSP-DGEVIATGSMDNTIRLWDPK---SGQCLGD 223
Query: 361 LPNAHTSDVNVISWNR-------TEPLIVSGGDDGCIHVWD-LRRFKKGSSVATFKHHTA 412
H+ + +SW ++P + S DG I +WD + R + T HT
Sbjct: 224 ALRGHSKWITSLSWEPIHLVKPGSKPRLASSSKDGTIKIWDTVSRVCQ----YTMSGHTN 279
Query: 413 PVTTVEWHPTESSTFASGGADDQIALWDL 441
V+ V+W SG D + +WD+
Sbjct: 280 SVSCVKWGG--QGLLYSGSHDRTVRVWDI 306
Score = 133 (51.9 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 37/134 (27%), Positives = 62/134 (46%)
Query: 262 TPPLFSFSGH--LTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHT 319
T P+ +GH L A S + + + +I +W R+ G + + GH
Sbjct: 392 TKPIARMTGHQKLVNHVAF---SPDGRYIVSASFDNSIKLWDGRD-GKFISTFR---GHV 444
Query: 320 NSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEP 379
SV + WS + R+L SCS D ++++WD R T+ + LP H +V + W+
Sbjct: 445 ASVYQVAWS-SDCRLLVSCSKDTTLKVWDVR---TRKLSVDLPG-HKDEVYTVDWSVDGK 499
Query: 380 LIVSGGDDGCIHVW 393
+ SGG D + +W
Sbjct: 500 RVCSGGKDKMVRLW 513
Score = 115 (45.5 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 42/170 (24%), Positives = 74/170 (43%)
Query: 281 SSTEPGVLATGDCKRNIHIWTPREAGAWQV---DQKPLVGHTNSVEDLQWSPGEKRVLAS 337
S +PG +T D + ++TPR + + GH +++ ++P + +
Sbjct: 104 SLIKPGYNSTED--QITLLYTPRAVFKVKPVTRSSSAIAGHGSTILCSAFAPHTSSRMVT 161
Query: 338 CSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRR 397
+ D + RIWD +T++ M TL H + V +SW+ +I +G D I +WD
Sbjct: 162 GAGDNTARIWDC---DTQTPMHTL-KGHYNWVLCVSWSPDGEVIATGSMDNTIRLWDP-- 215
Query: 398 FKKGSSVA-TFKHHTAPVTTVEWHPTE------SSTFASGGADDQIALWD 440
K G + + H+ +T++ W P AS D I +WD
Sbjct: 216 -KSGQCLGDALRGHSKWITSLSWEPIHLVKPGSKPRLASSSKDGTIKIWD 264
Score = 95 (38.5 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 34/141 (24%), Positives = 56/141 (39%)
Query: 168 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAE 227
P+ + GH + WS + V+ATG I +W P+ +G D L GH+
Sbjct: 178 PMHTLKGHYNWVLCVSWSP-DGEVIATGSMDNTIRLWDPK-SGQCLGDA--LRGHSKWIT 233
Query: 228 DLQWSDLKTALQTVDDPFQLAEHNKKRG-K-GPGIPTPPLFSFSGHLTEGFAMDWSSTEP 285
L W + ++ P +LA +K K + ++ SGH + W
Sbjct: 234 SLSWEPIHL-VKPGSKP-RLASSSKDGTIKIWDTVSRVCQYTMSGHTNSVSCVKWGGQ-- 289
Query: 286 GVLATGDCKRNIHIWTPREAG 306
G+L +G R + +W G
Sbjct: 290 GLLYSGSHDRTVRVWDINSQG 310
Score = 57 (25.1 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 28/125 (22%), Positives = 47/125 (37%)
Query: 646 TPPLFSFSGH--LTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSVYL--YTNRF 701
T P+ +GH L A S + + + +I +W R+ S + + +
Sbjct: 392 TKPIARMTGHQKLVNHVAF---SPDGRYIVSASFDNSIKLWDGRDGKFISTFRGHVASVY 448
Query: 702 GVLATGDCKRNIHIWTPREAGAWQVDQKPLV----GHTNSVEDLQWSPGEKRVLASCSVD 757
V + DC+ + W V + L GH + V + WS KRV S D
Sbjct: 449 QVAWSSDCRLLVSCSKDTTLKVWDVRTRKLSVDLPGHKDEVYTVDWSVDGKRV-CSGGKD 507
Query: 758 RSNRI 762
+ R+
Sbjct: 508 KMVRL 512
Score = 37 (18.1 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 6/14 (42%), Positives = 10/14 (71%)
Query: 615 IWDLKTALQTVDDP 628
+WD++T +VD P
Sbjct: 470 VWDVRTRKLSVDLP 483
>UNIPROTKB|B4QFZ8 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7240 "Drosophila simulans"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CM000362 OrthoDB:EOG45DV4X RefSeq:XP_002081558.1
UniGene:Dsi.12266 ProteinModelPortal:B4QFZ8
EnsemblMetazoa:FBtr0225561 GeneID:6734549 KEGG:dsi:Dsim_GD25651
FlyBase:FBgn0196936 Uniprot:B4QFZ8
Length = 335
Score = 179 (68.1 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 70/280 (25%), Positives = 121/280 (43%)
Query: 270 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSP 329
GH + WS LA+ IW+ + +G ++ + L GH N V+ + WS
Sbjct: 57 GHKRTIREIRWSPCGQ-YLASASFDATTAIWS-KSSGEFECNAT-LEGHENEVKSVSWSR 113
Query: 330 GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGC 389
+LA+CS D S+ IW+ + C L N HT DV + W+ T+ ++ S D
Sbjct: 114 SGG-LLATCSRDKSVWIWEVAGDDEFECAAVL-NPHTQDVKRVVWHPTKDVLASASYDNT 171
Query: 390 IHVWDLRRFKKG-SSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSE 448
I ++ AT HT+ V +++ + S D I +W A +
Sbjct: 172 IKMFAEEPIDNDWDCTATLTSHTSTVWGIDFD-ADGERLVSCSDDTTIKIWK-AYHPGNT 229
Query: 449 IEQREAELKDLPSQLLFIHLGQ--KEIKELHWHPQLPGTIISTA--NSGFNIFRTISDL- 503
E + + + + GQ + I ++ W +L G +I+TA + G IF+ SD
Sbjct: 230 AGVATPEQQTVWKCVCTVS-GQHSRAIYDVSWC-KLTG-LIATACGDDGIRIFKETSDSK 286
Query: 504 PSQLLFIHLGQKE------IKELHWHPQLPGTIISTANSG 537
P + F + +E + + W+P + G +IS ++ G
Sbjct: 287 PDEPTFEQITAEEGAHDQDVNSVQWNPVVAGQLISCSDDG 326
Score = 179 (68.1 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 81/338 (23%), Positives = 139/338 (41%)
Query: 171 SFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQ 230
+ GH + + W + G+ K I IW+ W GH + +++
Sbjct: 9 TLQGHKGRIWGVAWHPKGNVFASCGEDKA-IRIWS-LTGNTWSTKTILSDGHKRTIREIR 66
Query: 231 WSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLAT 290
WS L + A +K G+ T GH E ++ WS + G+LAT
Sbjct: 67 WSPCGQYLASASFDATTAIWSKSSGEFECNAT-----LEGHENEVKSVSWSRSG-GLLAT 120
Query: 291 GDCKRNIHIWTPREAGAWQVDQKPLVG-HTNSVEDLQWSPGEKRVLASCSVDLSIRIWDT 349
C R+ +W AG + + ++ HT V+ + W P K VLAS S D +I+++
Sbjct: 121 --CSRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVWHP-TKDVLASASYDNTIKMFAE 177
Query: 350 RVI-NTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVAT-- 406
I N C TL +HTS V I ++ +VS DD I +W + VAT
Sbjct: 178 EPIDNDWDCTATL-TSHTSTVWGIDFDADGERLVSCSDDTTIKIWKAYHPGNTAGVATPE 236
Query: 407 ----FK-------HHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAE 455
+K H+ + V W + A+ DD I ++ + S+ + E
Sbjct: 237 QQTVWKCVCTVSGQHSRAIYDVSWCKL-TGLIATACGDDGIRIF----KETSDSKPDEPT 291
Query: 456 LKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSG 493
+ + ++ H +++ + W+P + G +IS ++ G
Sbjct: 292 FEQITAEE-GAH--DQDVNSVQWNPVVAGQLISCSDDG 326
Score = 51 (23.0 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 734 HTNSVEDLQWSPGEKRVLASCSVDRSNRI 762
H V +QW+P L SCS D + +I
Sbjct: 302 HDQDVNSVQWNPVVAGQLISCSDDGTIKI 330
>UNIPROTKB|B4HRQ6 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7238 "Drosophila sechellia"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH480816 OrthoDB:EOG45DV4X RefSeq:XP_002033907.1
ProteinModelPortal:B4HRQ6 EnsemblMetazoa:FBtr0203159 GeneID:6609216
KEGG:dse:Dsec_GM20174 FlyBase:FBgn0175057 Uniprot:B4HRQ6
Length = 335
Score = 179 (68.1 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 83/340 (24%), Positives = 143/340 (42%)
Query: 171 SFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQ 230
+ GH + + W + G+ K I IW+ W GH + +++
Sbjct: 9 TLQGHKGRIWGVAWHPKGNVFASCGEDKA-IRIWS-LTGNTWGTKTILSDGHKRTIREIR 66
Query: 231 WSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLAT 290
WS L + A +K G+ T GH E ++ WS + G+LAT
Sbjct: 67 WSPCGQYLASASFDATTAIWSKSSGEFECNAT-----LEGHENEVKSVSWSRSG-GLLAT 120
Query: 291 GDCKRNIHIWTPREAGAWQVDQKPLVG-HTNSVEDLQWSPGEKRVLASCSVDLSIRIWDT 349
C R+ +W AG + + ++ HT V+ + W P K VLAS S D +I+++
Sbjct: 121 --CSRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVWHP-TKDVLASASYDNTIKMFAE 177
Query: 350 RVI-NTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSS--VAT 406
I N C TL +HTS V I ++ +VS DD I +W R + G++ VAT
Sbjct: 178 EPIDNDWDCTATL-TSHTSTVWGIDFDADGERLVSCSDDTTIKIW--RAYHPGNTAGVAT 234
Query: 407 ------FK-------HHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQRE 453
+K H+ + V W + A+ DD I ++ + S+ + E
Sbjct: 235 PEQQTVWKCVCTVSGQHSRAIYDVSWCKL-TGLIATACGDDGIRIF----KETSDSKPDE 289
Query: 454 AELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSG 493
+ + ++ H +++ + W+P + G +IS ++ G
Sbjct: 290 PTFEQITAEE-GAH--DQDVNSVQWNPVVAGQLISCSDDG 326
Score = 178 (67.7 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 70/280 (25%), Positives = 121/280 (43%)
Query: 270 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSP 329
GH + WS LA+ IW+ + +G ++ + L GH N V+ + WS
Sbjct: 57 GHKRTIREIRWSPCGQ-YLASASFDATTAIWS-KSSGEFECNAT-LEGHENEVKSVSWSR 113
Query: 330 GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGC 389
+LA+CS D S+ IW+ + C L N HT DV + W+ T+ ++ S D
Sbjct: 114 SGG-LLATCSRDKSVWIWEVAGDDEFECAAVL-NPHTQDVKRVVWHPTKDVLASASYDNT 171
Query: 390 IHVWDLRRFKKG-SSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSE 448
I ++ AT HT+ V +++ + S D I +W A +
Sbjct: 172 IKMFAEEPIDNDWDCTATLTSHTSTVWGIDFD-ADGERLVSCSDDTTIKIWR-AYHPGNT 229
Query: 449 IEQREAELKDLPSQLLFIHLGQ--KEIKELHWHPQLPGTIISTA--NSGFNIFRTISDL- 503
E + + + + GQ + I ++ W +L G +I+TA + G IF+ SD
Sbjct: 230 AGVATPEQQTVWKCVCTVS-GQHSRAIYDVSWC-KLTG-LIATACGDDGIRIFKETSDSK 286
Query: 504 PSQLLFIHLGQKE------IKELHWHPQLPGTIISTANSG 537
P + F + +E + + W+P + G +IS ++ G
Sbjct: 287 PDEPTFEQITAEEGAHDQDVNSVQWNPVVAGQLISCSDDG 326
Score = 51 (23.0 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 734 HTNSVEDLQWSPGEKRVLASCSVDRSNRI 762
H V +QW+P L SCS D + +I
Sbjct: 302 HDQDVNSVQWNPVVAGQLISCSDDGTIKI 330
>UNIPROTKB|B5X212 [details] [associations]
symbol:ciao1b "Probable cytosolic iron-sulfur protein
assembly protein ciao1-B" species:8030 "Salmo salar" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] [GO:0097361 "CIA
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016226 GO:GO:0097361 EMBL:BT045081
ProteinModelPortal:B5X212 Uniprot:B5X212
Length = 333
Score = 187 (70.9 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 61/231 (26%), Positives = 111/231 (48%)
Query: 315 LVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISW 374
L GH N V+ + W+P +LA+CS D S+ IW+ N C+ ++ N+HT DV + W
Sbjct: 101 LEGHENEVKCVAWAPSGN-LLATCSRDKSVWIWEVDEENEYECV-SVVNSHTQDVKHVVW 158
Query: 375 NRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADD 434
+ T+ L+ S D + V+ AT + HT+ V + + P+ AS D
Sbjct: 159 HPTQELLASCSYDNNVCVYK-EEDDDWECRATLEGHTSTVWGLTFDPS-GQRLASCSDDC 216
Query: 435 QIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTA-NSG 493
+ +W + E +A K + + L H G + + ++ W P L G + + + G
Sbjct: 217 TVKIWKECQPEGGQ-EGTDAAWKCVCT-LSGFH-G-RTVYDIAWCP-LTGALATACGDDG 271
Query: 494 FNIFR---TIS-DLPSQLLFIHLGQKEIKELH---WHPQLPGTIISTANSG 537
+F+ T D P+ L H+ + ++++ WHP+ G ++S +++G
Sbjct: 272 VRVFKEDETADPDQPAFSLSAHVPKAHTQDVNCIAWHPKEAGLLVSCSDNG 322
Score = 169 (64.5 bits), Expect = 7.3e-11, Sum P(2) = 7.3e-11
Identities = 47/166 (28%), Positives = 75/166 (45%)
Query: 287 VLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRI 346
+LA+ R I IW RE +W+ GH +V + WSP LAS S D + I
Sbjct: 30 LLASCGGDRTIRIWG-REGDSWECKTVLQDGHQRTVRKVAWSPCGN-YLASASFDATTCI 87
Query: 347 WDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVAT 406
W + N LT+ H ++V ++W + L+ + D + +W++ + V+
Sbjct: 88 WKKK--NDDFECLTVLEGHENEVKCVAWAPSGNLLATCSRDKSVWIWEVDEENEYECVSV 145
Query: 407 FKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQR 452
HT V V WHPT+ AS D+ + ++ E D + E R
Sbjct: 146 VNSHTQDVKHVVWHPTQE-LLASCSYDNNVCVYK---EEDDDWECR 187
Score = 150 (57.9 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 53/178 (29%), Positives = 82/178 (46%)
Query: 280 WSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCS 339
W T+ +LA+ N+ ++ E W+ + L GHT++V L + P +R LASCS
Sbjct: 158 WHPTQE-LLASCSYDNNVCVYK-EEDDDWEC-RATLEGHTSTVWGLTFDPSGQR-LASCS 213
Query: 340 VDLSIRIW-----DTRVINTKS---CMLTLPNAHTSDVNVISW-NRTEPLIVSGGDDGCI 390
D +++IW + T + C+ TL H V I+W T L + GDDG +
Sbjct: 214 DDCTVKIWKECQPEGGQEGTDAAWKCVCTLSGFHGRTVYDIAWCPLTGALATACGDDG-V 272
Query: 391 HVW--------DLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWD 440
V+ D F + V K HT V + WHP E+ S + +IA+W+
Sbjct: 273 RVFKEDETADPDQPAFSLSAHVP--KAHTQDVNCIAWHPKEAGLLVSCSDNGEIAVWN 328
Score = 55 (24.4 bits), Expect = 7.3e-11, Sum P(2) = 7.3e-11
Identities = 24/91 (26%), Positives = 35/91 (38%)
Query: 602 TLAGVWGEVGKVGIW-DLKTALQTV--DDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTE 658
TL+G G W L AL T DD ++ + ++ P P FS S H+ +
Sbjct: 242 TLSGFHGRTVYDIAWCPLTGALATACGDDGVRVFKEDETAD-----PDQPAFSLSAHVPK 296
Query: 659 GFAMD-----WSSTEPGVLATGDCKRNIHIW 684
D W E G+L + I +W
Sbjct: 297 AHTQDVNCIAWHPKEAGLLVSCSDNGEIAVW 327
Score = 54 (24.1 bits), Expect = 9.2e-11, Sum P(2) = 9.2e-11
Identities = 10/22 (45%), Positives = 12/22 (54%)
Query: 734 HTNSVEDLQWSPGEKRVLASCS 755
HT V + W P E +L SCS
Sbjct: 298 HTQDVNCIAWHPKEAGLLVSCS 319
Score = 38 (18.4 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 7/24 (29%), Positives = 11/24 (45%)
Query: 734 HTNSVEDLQWSPGEKRVLASCSVD 757
H +V D+ W P + +C D
Sbjct: 247 HGRTVYDIAWCPLTGALATACGDD 270
>UNIPROTKB|B4JW81 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7222 "Drosophila grimshawi"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CH916375 OMA:SWKCVCT OrthoDB:EOG45DV4X
RefSeq:XP_001995147.1 ProteinModelPortal:B4JW81 STRING:B4JW81
EnsemblMetazoa:FBtr0158402 GeneID:6569131 KEGG:dgr:Dgri_GH22988
FlyBase:FBgn0130445 InParanoid:B4JW81 Uniprot:B4JW81
Length = 331
Score = 182 (69.1 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 79/340 (23%), Positives = 142/340 (41%)
Query: 171 SFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQ 230
+ GH + + W + G+ K I IW+ + W GH + +++
Sbjct: 9 TLQGHKGRIWGVAWHPKGNSFASCGEDKA-IRIWS-QSGNTWTTKTILSDGHKRTIREVR 66
Query: 231 WSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLAT 290
WS L + A +K + GH E ++ WS + G+LAT
Sbjct: 67 WSPCGEYLASASFDATTAIWSKHECNA---------TLEGHENEVKSVSWSQSG-GLLAT 116
Query: 291 GDCKRNIHIWTPREAGAWQVDQKPLVG-HTNSVEDLQWSPGEKRVLASCSVDLSIRIWDT 349
C R+ +W AG + + ++ HT V+ + W P K +LAS S D +I+++
Sbjct: 117 --CSRDKSVWIWEVAGDDEFECAAVLNAHTQDVKRVVWHPS-KEILASASYDNTIKMYAE 173
Query: 350 RVINTK-SCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSS--VAT 406
+++ C TL ++HTS V I + +VS DD + +W R + G+ +AT
Sbjct: 174 SALDSDWDCTATL-SSHTSTVWSIDFEADGERLVSCSDDTTLKIW--RAYHPGNEAGIAT 230
Query: 407 ------FK-------HHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQRE 453
+K H+ V V W + AS DD I ++ ++S +R+
Sbjct: 231 PDKTTVWKCVCTVAGQHSRAVYDVSWCKL-TGLIASACGDDGIRIF-----KESSDSKRD 284
Query: 454 AELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSG 493
+L + H ++++ + W+P G +IS ++ G
Sbjct: 285 EPTFELLTAEESAH--EQDVNAVEWNPVTAGQLISCSDDG 322
Score = 177 (67.4 bits), Expect = 5.5e-11, Sum P(2) = 5.5e-11
Identities = 69/279 (24%), Positives = 117/279 (41%)
Query: 270 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSP 329
GH + WS LA+ IW+ E A L GH N V+ + WS
Sbjct: 57 GHKRTIREVRWSPCGE-YLASASFDATTAIWSKHECNA------TLEGHENEVKSVSWSQ 109
Query: 330 GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGC 389
+LA+CS D S+ IW+ + C L NAHT DV + W+ ++ ++ S D
Sbjct: 110 SGG-LLATCSRDKSVWIWEVAGDDEFECAAVL-NAHTQDVKRVVWHPSKEILASASYDNT 167
Query: 390 IHVWDLRRFKKG-SSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSE 448
I ++ AT HT+ V ++++ + S D + +W A +E
Sbjct: 168 IKMYAESALDSDWDCTATLSSHTSTVWSIDFE-ADGERLVSCSDDTTLKIWR-AYHPGNE 225
Query: 449 IEQREAELKDLPSQLLFIHLGQ--KEIKELHWHPQLPGTIISTA-NSGFNIFRTISDL-- 503
+ K + + GQ + + ++ W +L G I S + G IF+ SD
Sbjct: 226 AGIATPD-KTTVWKCVCTVAGQHSRAVYDVSWC-KLTGLIASACGDDGIRIFKESSDSKR 283
Query: 504 --PS-QLLFIHLG--QKEIKELHWHPQLPGTIISTANSG 537
P+ +LL ++++ + W+P G +IS ++ G
Sbjct: 284 DEPTFELLTAEESAHEQDVNAVEWNPVTAGQLISCSDDG 322
Score = 138 (53.6 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 60/244 (24%), Positives = 102/244 (41%)
Query: 171 SFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVD-QKPLGGHTNSAEDL 229
+ GH E ++ WS + G+LAT C R+ +W AG + + L HT + +
Sbjct: 94 TLEGHENEVKSVSWSQSG-GLLAT--CSRDKSVWIWEVAGDDEFECAAVLNAHTQDVKRV 150
Query: 230 QWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLA 289
W K L + + + + T L S H + +++D+ + +++
Sbjct: 151 VWHPSKEILASASYDNTIKMYAESALDSDWDCTATL---SSHTSTVWSIDFEADGERLVS 207
Query: 290 TGD---CK--RNIH------IWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASC 338
D K R H I TP + W+ H+ +V D+ W + ++C
Sbjct: 208 CSDDTTLKIWRAYHPGNEAGIATPDKTTVWKCVCTVAGQHSRAVYDVSWCKLTGLIASAC 267
Query: 339 SVDLSIRIW----DTRVINTKSCMLTLP-NAHTSDVNVISWNR-TEPLIVSGGDDGCIHV 392
D IRI+ D++ +LT +AH DVN + WN T ++S DDG I +
Sbjct: 268 GDD-GIRIFKESSDSKRDEPTFELLTAEESAHEQDVNAVEWNPVTAGQLISCSDDGTIKI 326
Query: 393 WDLR 396
W L+
Sbjct: 327 WKLQ 330
Score = 47 (21.6 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 734 HTNSVEDLQWSPGEKRVLASCSVDRSNRI 762
H V ++W+P L SCS D + +I
Sbjct: 298 HEQDVNAVEWNPVTAGQLISCSDDGTIKI 326
Score = 39 (18.8 bits), Expect = 9.4e-11, Sum P(2) = 9.4e-11
Identities = 10/36 (27%), Positives = 16/36 (44%)
Query: 653 SGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPRE 688
S H + A++W+ G L + I IW +E
Sbjct: 296 SAHEQDVNAVEWNPVTAGQLISCSDDGTIKIWKLQE 331
>TAIR|locus:2161253 [details] [associations]
symbol:MSI1 "MULTICOPY SUPRESSOR OF IRA1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0007275 "multicellular organismal development" evidence=IMP]
[GO:0016568 "chromatin modification" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0043234 "protein complex"
evidence=IPI] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009793
"embryo development ending in seed dormancy" evidence=IMP]
[GO:0031507 "heterochromatin assembly" evidence=RCA;IMP]
[GO:0009909 "regulation of flower development" evidence=RCA;IMP]
[GO:0008283 "cell proliferation" evidence=IMP] [GO:0010026
"trichome differentiation" evidence=IMP] [GO:0048366 "leaf
development" evidence=IMP] [GO:0010214 "seed coat development"
evidence=IMP] [GO:0048316 "seed development" evidence=IMP]
[GO:0009555 "pollen development" evidence=IGI;IMP] [GO:0045787
"positive regulation of cell cycle" evidence=IGI;RCA] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=ISS] [GO:0006349
"regulation of gene expression by genetic imprinting" evidence=IPI]
[GO:0006275 "regulation of DNA replication" evidence=RCA]
[GO:0009965 "leaf morphogenesis" evidence=RCA] [GO:0010389
"regulation of G2/M transition of mitotic cell cycle" evidence=RCA]
[GO:0016570 "histone modification" evidence=RCA] [GO:0048449
"floral organ formation" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009507 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0009555 GO:GO:0010214 GO:GO:0008283
GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 EMBL:AB019228 GO:GO:0009793 GO:GO:0009908
GO:GO:0048366 GO:GO:0009909 GO:GO:0006349 GO:GO:0016585
GO:GO:0045787 GO:GO:0031507 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0080008 GO:GO:0010026 HOGENOM:HOG000160330
OMA:DGFLLHV EMBL:AF016846 EMBL:AY059874 EMBL:AY114646
IPI:IPI00535841 RefSeq:NP_200631.1 UniGene:At.49185
UniGene:At.66738 ProteinModelPortal:O22467 SMR:O22467
DIP:DIP-33481N IntAct:O22467 STRING:O22467 PaxDb:O22467
PRIDE:O22467 EnsemblPlants:AT5G58230.1 GeneID:835935
KEGG:ath:AT5G58230 GeneFarm:2813 TAIR:At5g58230 InParanoid:O22467
PhylomeDB:O22467 ProtClustDB:CLSN2683757 Genevestigator:O22467
GermOnline:AT5G58230 Uniprot:O22467
Length = 424
Score = 171 (65.3 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 87/364 (23%), Positives = 147/364 (40%)
Query: 212 WQVDQKPLGGHTNSAED--LQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPP--LFS 267
+ V + LG HT+ +E L + ++ L + + + ++ G G T +
Sbjct: 61 YSVQKMILGTHTSESEPNYLMLAQVQLPLDDTESEARQYDDDRSEFGGFGCATGKVQIIQ 120
Query: 268 FSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWT-------PREAGAWQVDQKPLVGHTN 320
H E + P ++AT ++++ P GA D K L GH++
Sbjct: 121 QINHDGEVNRARYMPQNPFIIATKTVNAEVYVFDYSKHPSKPPLDGACNPDLK-LRGHSS 179
Query: 321 SVEDLQWSPGEKRVLASCSVDLSIRIWDTRVI-NTKSC-MLTLPNAHTSDVNVISWN-RT 377
L WS ++ L S S D I +WD KS + AH V ++W+ R
Sbjct: 180 EGYGLSWSKFKQGHLLSGSDDAQICLWDINATPKNKSLDAQQIFKAHEGVVEDVAWHLRH 239
Query: 378 EPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIA 437
E L S GDD + +WDLR V + H+ V + ++P A+G D +
Sbjct: 240 EYLFGSVGDDQYLLIWDLRSPSASKPVQSVVAHSMEVNCLAFNPFNEWVVATGSTDKTVK 299
Query: 438 LWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIF 497
L+DL + L + L ++E+ ++ W+P+ TI+++ G +
Sbjct: 300 LFDL---------------RKLSTALHTFDSHKEEVFQVGWNPKNE-TILASCCLGRRLM 343
Query: 498 ----------RTISDL---PSQLLFIHLGQ-KEIKELHWHPQLPGTIISTANSGFNIFRT 543
+T+ D P +LLFIH G +I + W+P I S A NI +
Sbjct: 344 VWDLSRIDEEQTVEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAED--NILQI 401
Query: 544 ISMS 547
M+
Sbjct: 402 WQMA 405
Score = 168 (64.2 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 61/263 (23%), Positives = 106/263 (40%)
Query: 153 EHNKKRGKGP--GIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIW----TP 206
+++K K P G P L GH +EG+ + WS + G L +G I +W TP
Sbjct: 154 DYSKHPSKPPLDGACNPDL-KLRGHSSEGYGLSWSKFKQGHLLSGSDDAQICLWDINATP 212
Query: 207 REAGAWQVD-QKPLGGHTNSAEDLQWSDLKTAL--QTVDDPFQLAEHNKKRGKGPGIPTP 263
+ +D Q+ H ED+ W L DD + L + P +
Sbjct: 213 KNKS---LDAQQIFKAHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRS----PSA-SK 264
Query: 264 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVE 323
P+ S H E + ++ V+ATG + + ++ R+ H V
Sbjct: 265 PVQSVVAHSMEVNCLAFNPFNEWVVATGSTDKTVKLFDLRKLST---ALHTFDSHKEEVF 321
Query: 324 DLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSC----------MLTLPNAHTSDVNVIS 373
+ W+P + +LASC + + +WD I+ + +L + HTS ++ S
Sbjct: 322 QVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTVEDAEDGPPELLFIHGGHTSKISDFS 381
Query: 374 WNRTEPLIVSG-GDDGCIHVWDL 395
WN E ++S +D + +W +
Sbjct: 382 WNPCEDWVISSVAEDNILQIWQM 404
Score = 65 (27.9 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 733 GHTNSVEDLQWSPGEKRVLASCSVDRSNRIGARRDMLY 770
GHT+ + D W+P E V++S + D +I + +Y
Sbjct: 372 GHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIY 409
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 187 (70.9 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 45/135 (33%), Positives = 68/135 (50%)
Query: 307 AWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHT 366
AW++ + +V H ++V L R+LA+ D + +W IN +C+++L HT
Sbjct: 10 AWKLQE--IVAHASNVSSLVLGKASGRLLATGGDDCRVNLWS---INKPNCIMSL-TGHT 63
Query: 367 SDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESST 426
S V + N E LIV+G G I VWDL K + T H A + ++++HP
Sbjct: 64 SPVESVRLNTPEELIVAGSQSGSIRVWDLEAAK---ILRTLMGHKANICSLDFHPY-GEF 119
Query: 427 FASGGADDQIALWDL 441
ASG D I LWD+
Sbjct: 120 VASGSQDTNIKLWDI 134
Score = 185 (70.2 bits), Expect = 9.2e-11, P = 9.2e-11
Identities = 53/178 (29%), Positives = 88/178 (49%)
Query: 265 LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVED 324
+ S +GH + ++ ++ E ++A G +I +W + A ++ + L+GH ++
Sbjct: 56 IMSLTGHTSPVESVRLNTPEELIVA-GSQSGSIRVW---DLEAAKI-LRTLMGHKANICS 110
Query: 325 LQWSP-GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVS 383
L + P GE +AS S D +I++WD R K C+ H+ V + ++ + S
Sbjct: 111 LDFHPYGE--FVASGSQDTNIKLWDIR---RKGCVFRY-RGHSQAVRCLRFSPDGKWLAS 164
Query: 384 GGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDL 441
DD + +WDL G ++ F HT PV VE+HP E ASG +D I WDL
Sbjct: 165 AADDHTVKLWDLTA---GKMMSEFPGHTGPVNVVEFHPNEY-LLASGSSDRTIRFWDL 218
Score = 144 (55.7 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 44/140 (31%), Positives = 68/140 (48%)
Query: 265 LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVED 324
L + GH ++D+ V A+G NI +W R G V + GH+ +V
Sbjct: 98 LRTLMGHKANICSLDFHPYGEFV-ASGSQDTNIKLWDIRRKGC--VFRYR--GHSQAVRC 152
Query: 325 LQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSG 384
L++SP K LAS + D ++++WD + M P HT VNV+ ++ E L+ SG
Sbjct: 153 LRFSPDGKW-LASAADDHTVKLWD---LTAGKMMSEFPG-HTGPVNVVEFHPNEYLLASG 207
Query: 385 GDDGCIHVWDLRRFKKGSSV 404
D I WDL +F+ S +
Sbjct: 208 SSDRTIRFWDLEKFQVVSCI 227
Score = 53 (23.7 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 19/59 (32%), Positives = 31/59 (52%)
Query: 704 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRI 762
+A+G NI +W R G V + GH+ +V L++SP K LAS + D + ++
Sbjct: 120 VASGSQDTNIKLWDIRRKGC--VFRYR--GHSQAVRCLRFSPDGKW-LASAADDHTVKL 173
Score = 38 (18.4 bits), Expect = 5.0e-10, Sum P(2) = 5.0e-10
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 652 FSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIW 684
F GH +++ E +LA+G R I W
Sbjct: 185 FPGHTGPVNVVEFHPNEY-LLASGSSDRTIRFW 216
Score = 37 (18.1 bits), Expect = 6.3e-10, Sum P(2) = 6.3e-10
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 694 VYLYTNRFGVLATGDCKRNIHIW 716
V + N + +LA+G R I W
Sbjct: 195 VEFHPNEY-LLASGSSDRTIRFW 216
>UNIPROTKB|O00628 [details] [associations]
symbol:PEX7 "Peroxisomal targeting signal 2 receptor"
species:9606 "Homo sapiens" [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001958 "endochondral ossification" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0008611
"ether lipid biosynthetic process" evidence=IMP] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=IDA]
[GO:0016558 "protein import into peroxisome matrix"
evidence=IDA;IMP] [GO:0007031 "peroxisome organization"
evidence=IMP] [GO:0005777 "peroxisome" evidence=IDA] [GO:0019899
"enzyme binding" evidence=IPI] [GO:0042803 "protein
homodimerization activity" evidence=IDA] [GO:0005782 "peroxisomal
matrix" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0001764 GO:GO:0042803 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782
GO:GO:0008611 Orphanet:177 GO:GO:0016558 GO:GO:0001958 Orphanet:773
TCDB:3.A.20.1.1 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 EMBL:U88871 EMBL:U76560
EMBL:AF180814 EMBL:AF180806 EMBL:AF180807 EMBL:AF180808
EMBL:AF180809 EMBL:AF180810 EMBL:AF180811 EMBL:AF180812
EMBL:AF180813 EMBL:BC006268 IPI:IPI00012577 RefSeq:NP_000279.1
UniGene:Hs.280932 ProteinModelPortal:O00628 SMR:O00628
IntAct:O00628 STRING:O00628 PhosphoSite:O00628 PRIDE:O00628
DNASU:5191 Ensembl:ENST00000318471 GeneID:5191 KEGG:hsa:5191
UCSC:uc003qhd.3 GeneCards:GC06P137185 HGNC:HGNC:8860 HPA:HPA049202
MIM:215100 MIM:601757 MIM:614879 neXtProt:NX_O00628
PharmGKB:PA33202 InParanoid:O00628 PhylomeDB:O00628 GenomeRNAi:5191
NextBio:20076 ArrayExpress:O00628 Bgee:O00628 CleanEx:HS_PEX7
Genevestigator:O00628 GermOnline:ENSG00000112357 Uniprot:O00628
Length = 323
Score = 186 (70.5 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 51/192 (26%), Positives = 89/192 (46%)
Query: 264 PLFSFSGHLTEGFAMDWSSTE-PGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSV 322
PL + H E +++DWS T ++ +G + + +W P + + GH + +
Sbjct: 103 PLQVYKEHAQEVYSVDWSQTRGEQLVVSGSWDQTVKLWDPTVGKSLCTFR----GHESII 158
Query: 323 EDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR-TEPLI 381
WSP AS S D ++RIWD + + + +P AH +++ W + E L+
Sbjct: 159 YSTIWSPHIPGCFASASGDQTLRIWDVKAAGVR---IVIP-AHQAEILSCDWCKYNENLL 214
Query: 382 VSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDL 441
V+G D + WDLR ++ V HT + V++ P +S AS D + W+
Sbjct: 215 VTGAVDCSLRGWDLRNVRQ--PVFELLGHTYAIRRVKFSPFHASVLASCSYDFTVRFWNF 272
Query: 442 AVERDSEIEQRE 453
+ + DS +E E
Sbjct: 273 S-KPDSLLETVE 283
Score = 176 (67.0 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 50/176 (28%), Positives = 83/176 (47%)
Query: 275 GFAMDWSSTEPGVLATGDCKR-------NIHIWTPREAGAWQVDQKPLVGHTNSVEDLQW 327
G+A ++S PG LA + + I P EAG ++ + + + D+ W
Sbjct: 19 GYAAEFSPYLPGRLACATAQHYGIAGCGTLLILDPDEAGL-RLFRS--FDWNDGLFDVTW 75
Query: 328 SPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRT--EPLIVSGG 385
S + VL +CS D S+++WDT + L + H +V + W++T E L+VSG
Sbjct: 76 SENNEHVLITCSGDGSLQLWDTA---KAAGPLQVYKEHAQEVYSVDWSQTRGEQLVVSGS 132
Query: 386 DDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDL 441
D + +WD G S+ TF+ H + + + W P FAS D + +WD+
Sbjct: 133 WDQTVKLWDPT---VGKSLCTFRGHESIIYSTIWSPHIPGCFASASGDQTLRIWDV 185
Score = 134 (52.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 46/179 (25%), Positives = 75/179 (41%)
Query: 276 FAMDWSSTEPGVLATGDCKRNIHIW-TPREAGAWQVDQKPLVGHTNSVEDLQWSP--GEK 332
F + WS VL T ++ +W T + AG QV ++ H V + WS GE+
Sbjct: 71 FDVTWSENNEHVLITCSGDGSLQLWDTAKAAGPLQVYKE----HAQEVYSVDWSQTRGEQ 126
Query: 333 RVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEP-LIVSGGDDGCIH 391
V++ S D ++++WD V KS + T H S + W+ P S D +
Sbjct: 127 LVVSG-SWDQTVKLWDPTV--GKS-LCTF-RGHESIIYSTIWSPHIPGCFASASGDQTLR 181
Query: 392 VWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIE 450
+WD++ G + H A + + +W + +G D + WDL R E
Sbjct: 182 IWDVKA--AGVRIV-IPAHQAEILSCDWCKYNENLLVTGAVDCSLRGWDLRNVRQPVFE 237
Score = 134 (52.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 57/264 (21%), Positives = 101/264 (38%)
Query: 180 FAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQ 239
F + WS VL T ++ +W +A K H + WS +
Sbjct: 71 FDVTWSENNEHVLITCSGDGSLQLWDTAKAAGPLQVYKE---HAQEVYSVDWSQTRGEQL 127
Query: 240 TVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHI 299
V + + K P + L +F GH + ++ WS PG A+ + + I
Sbjct: 128 VVSGSW---DQTVKLWD-PTVGKS-LCTFRGHESIIYSTIWSPHIPGCFASASGDQTLRI 182
Query: 300 WTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCML 359
W + AG V + H + W + +L + +VD S+R WD R N + +
Sbjct: 183 WDVKAAGVRIV----IPAHQAEILSCDWCKYNENLLVTGAVDCSLRGWDLR--NVRQPVF 236
Query: 360 TLPNAHTSDVNVISWNRTEP-LIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVE 418
L HT + + ++ ++ S D + W+ K S + T +HHT ++
Sbjct: 237 ELLG-HTYAIRRVKFSPFHASVLASCSYDFTVRFWNFS--KPDSLLETVEHHTEFTCGLD 293
Query: 419 WHPTESSTFASGGADDQIALWDLA 442
+ + A D+ I ++D A
Sbjct: 294 FSLQSPTQVADCSWDETIKIYDPA 317
Score = 131 (51.2 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 52/230 (22%), Positives = 90/230 (39%)
Query: 168 PLFSFSGHLTEGFAMDWSSTE-PGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSA 226
PL + H E +++DWS T ++ +G + + +W P + + GH +
Sbjct: 103 PLQVYKEHAQEVYSVDWSQTRGEQLVVSGSWDQTVKLWDPTVGKSLCTFR----GHESII 158
Query: 227 EDLQWSD-LKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEP 285
WS + + L + K G I P H E + DW
Sbjct: 159 YSTIWSPHIPGCFASASGDQTLRIWDVKAA-GVRIVIP------AHQAEILSCDWCKYNE 211
Query: 286 GVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIR 345
+L TG ++ W R + L+GHT ++ +++SP VLASCS D ++R
Sbjct: 212 NLLVTGAVDCSLRGWDLRNVRQPVFE---LLGHTYAIRRVKFSPFHASVLASCSYDFTVR 268
Query: 346 IWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGD-DGCIHVWD 394
W+ + +L HT + ++ P V+ D I ++D
Sbjct: 269 FWN---FSKPDSLLETVEHHTEFTCGLDFSLQSPTQVADCSWDETIKIYD 315
>ZFIN|ZDB-GENE-040116-2 [details] [associations]
symbol:pafah1b1a "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit a" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0048854 "brain
morphogenesis" evidence=IGI;IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-2 GO:GO:0005737
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815
InterPro:IPR013720 Pfam:PF08513 GO:GO:0005874 GO:GO:0048854
EMBL:DQ141217 EMBL:BX324162 EMBL:BC053205 IPI:IPI00500448
RefSeq:NP_958502.1 UniGene:Dr.140597 ProteinModelPortal:Q7T394
SMR:Q7T394 STRING:Q7T394 PRIDE:Q7T394 Ensembl:ENSDART00000042218
GeneID:394246 KEGG:dre:394246 CTD:394246
GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
NextBio:20815155 Bgee:Q7T394 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 Uniprot:Q7T394
Length = 410
Score = 177 (67.4 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 57/206 (27%), Positives = 101/206 (49%)
Query: 252 KKRGKGPGIPTPP-LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQV 310
+KR IP PP ++ SGH + + + +++ + I +W E G ++
Sbjct: 87 QKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVFSVIVSASE-DATIKVWD-HETGDFE- 143
Query: 311 DQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVN 370
+ L GHT+SV+D+ + K +LASCS D++I++WD + C+ T+ + H +V+
Sbjct: 144 --RTLKGHTDSVQDISFDHTGK-LLASCSADMTIKLWDFQGFE---CIRTM-HGHDHNVS 196
Query: 371 VISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASG 430
++ IVS D I +W++ G V TF H V V P + T +
Sbjct: 197 SVAIMPNGDHIVSASRDKTIKMWEVAT---GYCVKTFTGHREWVRMVR--PNQDGTLIAS 251
Query: 431 GADDQ-IALWDLAVERDSEIEQREAE 455
++DQ + +W +A ++ + E RE E
Sbjct: 252 SSNDQTVRVWVVAT-KECKAELREHE 276
Score = 139 (54.0 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 39/116 (33%), Positives = 60/116 (51%)
Query: 282 STEPG-VLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSV 340
S +PG L +G + I +W G + LVGH N V + PG K ++ SC+
Sbjct: 304 SGKPGPFLLSGSRDKTIKMWDV-SIGMCLMT---LVGHDNWVRGVLVHPGGKYIV-SCAD 358
Query: 341 DLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLR 396
D ++RIWD + K C TL +AH V + +++T P +V+G D + VW+ R
Sbjct: 359 DKTLRIWDYK---NKRCTKTL-SAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 57 (25.1 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 14/32 (43%), Positives = 20/32 (62%)
Query: 731 LVGHTNSVEDLQWSPGEKRVLASCSVDRSNRI 762
LVGH N V + PG K ++ SC+ D++ RI
Sbjct: 334 LVGHDNWVRGVLVHPGGKYIV-SCADDKTLRI 364
>MGI|MGI:1927241 [details] [associations]
symbol:Wdr12 "WD repeat domain 12" species:10090 "Mus
musculus" [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IPI]
[GO:0008283 "cell proliferation" evidence=ISO] [GO:0030687
"preribosome, large subunit precursor" evidence=ISO] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0070545 "PeBoW complex"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1927241 GO:GO:0005654 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 GO:GO:0000466
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464
OMA:LQTRFFT HAMAP:MF_03029 CTD:55759 GeneTree:ENSGT00640000091456
HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM EMBL:AY059431 EMBL:AY059432
EMBL:AF239765 EMBL:AB041608 EMBL:AK007500 EMBL:AK012022
EMBL:AK016611 EMBL:AK031436 EMBL:BC004748 EMBL:BC052386
IPI:IPI00121562 RefSeq:NP_001185989.1 RefSeq:NP_001185990.1
RefSeq:NP_067287.1 UniGene:Mm.281079 ProteinModelPortal:Q9JJA4
SMR:Q9JJA4 STRING:Q9JJA4 PhosphoSite:Q9JJA4 PaxDb:Q9JJA4
PRIDE:Q9JJA4 Ensembl:ENSMUST00000027173 Ensembl:ENSMUST00000117438
Ensembl:ENSMUST00000122038 GeneID:57750 KEGG:mmu:57750
InParanoid:Q9JJA4 NextBio:313896 Bgee:Q9JJA4 CleanEx:MM_WDR12
Genevestigator:Q9JJA4 GermOnline:ENSMUSG00000026019 Uniprot:Q9JJA4
Length = 423
Score = 189 (71.6 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 63/209 (30%), Positives = 98/209 (46%)
Query: 231 WSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFA-MDWSSTEPGVLA 289
WS + T + + K++ + G+ PL + SGH TE + + WS E A
Sbjct: 216 WSTVPTDEEDEMEEATNRPRKKQKTEQLGLTRTPLVTLSGH-TEAISSVLWSDAEEICSA 274
Query: 290 TGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVED-LQWSPGEKRVLASCSVDLSIRIWD 348
+ D I +W G + L G N V + + +SP KR LAS S D IR+WD
Sbjct: 275 SWD--HTIRVWDVESGGL----KSTLTG--NKVFNCISYSPLCKR-LASGSTDRHIRLWD 325
Query: 349 TRVINTKSCMLTLPNAHTSDVNVISWNRT-EPLIVSGGDDGCIHVWDLRRFKKGSSVATF 407
R + L+L +HT V + W+ T E ++SG D + +WD R K + +
Sbjct: 326 PRTKDGSLVSLSL-TSHTGWVTSVKWSPTHEQQLISGSLDNIVKLWDTRSCK--APLYDL 382
Query: 408 KHHTAPVTTVEWHPTESSTFASGGADDQI 436
H V +V+W T++ SGGAD+++
Sbjct: 383 AAHEDKVLSVDW--TDTGLLLSGGADNKL 409
Score = 181 (68.8 bits), Expect = 2.9e-11, Sum P(2) = 2.9e-11
Identities = 80/294 (27%), Positives = 120/294 (40%)
Query: 180 FAMDWSSTEPGV---LATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQW---SD 233
F DW S+ G + +G + IW+ + GHT+ +D+ W
Sbjct: 99 FHDDWISSIEGAEEWILSGSYDKTSRIWSLEGKSIMTIV-----GHTDVVKDVAWVKKDS 153
Query: 234 LKTALQT--VDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHL--TEGFAMDWSSTEPGVLA 289
L L T +D L E N ++ K L GH + A+D S +
Sbjct: 154 LSCLLLTASMDQTVLLWEWNVEKNK-----VKALHCCRGHAGSVDAIAVDSSGAK---FC 205
Query: 290 TGDCKRNIHIWT----------------PREAGAWQ---VDQKPLV---GHTNSVEDLQW 327
+G + + IW+ PR+ + + + PLV GHT ++ + W
Sbjct: 206 SGSWDKMLKIWSTVPTDEEDEMEEATNRPRKKQKTEQLGLTRTPLVTLSGHTEAISSVLW 265
Query: 328 SPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDD 387
S E+ + S S D +IR+WD KS TL N IS++ + SG D
Sbjct: 266 SDAEE--ICSASWDHTIRVWDVESGGLKS---TLTGNKV--FNCISYSPLCKRLASGSTD 318
Query: 388 GCIHVWDLRRFKKGSSVA-TFKHHTAPVTTVEWHPTESSTFASGGADDQIALWD 440
I +WD R K GS V+ + HT VT+V+W PT SG D+ + LWD
Sbjct: 319 RHIRLWDPRT-KDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNIVKLWD 371
Score = 144 (55.7 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 36/104 (34%), Positives = 55/104 (52%)
Query: 288 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIW 347
LA+G R+I +W PR V L HT V ++WSP ++ L S S+D +++W
Sbjct: 312 LASGSTDRHIRLWDPRTKDGSLVSLS-LTSHTGWVTSVKWSPTHEQQLISGSLDNIVKLW 370
Query: 348 DTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIH 391
DTR + K+ + L AH V + W T L++SGG D ++
Sbjct: 371 DTR--SCKAPLYDLA-AHEDKVLSVDWTDTG-LLLSGGADNKLY 410
Score = 136 (52.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 51/185 (27%), Positives = 77/185 (41%)
Query: 586 HRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHN-KKRGKGP-- 642
H G ++ + G+ +G W ++ K IW T +D + A + +K+ K
Sbjct: 188 HAGSVDAIAVDSSGAKFCSGSWDKMLK--IWS--TVPTDEEDEMEEATNRPRKKQKTEQL 243
Query: 643 GIPTPPLFSFSGHLTEGFA-MDWSSTEPGVLATGDCKRNIHIWTPREAGAWSVYLYTNRF 701
G+ PL + SGH TE + + WS E A+ D I +W G S F
Sbjct: 244 GLTRTPLVTLSGH-TEAISSVLWSDAEEICSASWD--HTIRVWDVESGGLKSTLTGNKVF 300
Query: 702 GV---------LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLA 752
LA+G R+I +W PR V L HT V ++WSP ++ L
Sbjct: 301 NCISYSPLCKRLASGSTDRHIRLWDPRTKDGSLVSLS-LTSHTGWVTSVKWSPTHEQQLI 359
Query: 753 SCSVD 757
S S+D
Sbjct: 360 SGSLD 364
Score = 51 (23.0 bits), Expect = 2.9e-11, Sum P(2) = 2.9e-11
Identities = 9/38 (23%), Positives = 21/38 (55%)
Query: 648 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWT 685
PL+ + H + ++DW+ T G+L +G ++ ++
Sbjct: 378 PLYDLAAHEDKVLSVDWTDT--GLLLSGGADNKLYSYS 413
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 176 (67.0 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 58/206 (28%), Positives = 101/206 (49%)
Query: 252 KKRGKGPGIPTPP-LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQV 310
+KR IP PP ++ SGH + + + V+ + I +W E G ++
Sbjct: 22 QKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVF-SVMVSASEDATIKVWD-YETGDFE- 78
Query: 311 DQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVN 370
+ L GHT+SV+D+ + K +LASCS D++I++WD + C+ T+ + H +V+
Sbjct: 79 --RTLKGHTDSVQDISFDHSGK-LLASCSADMTIKLWDFQGFE---CIRTM-HGHDHNVS 131
Query: 371 VISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASG 430
++ IVS D I +W+++ G V TF H V V P + T +
Sbjct: 132 SVAIMPNGDHIVSASRDKTIKMWEVQT---GYCVKTFTGHREWVRMVR--PNQDGTLIAS 186
Query: 431 GADDQ-IALWDLAVERDSEIEQREAE 455
++DQ + +W +A ++ + E RE E
Sbjct: 187 CSNDQTVRVWVVAT-KECKAELREHE 211
Score = 148 (57.2 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 40/116 (34%), Positives = 61/116 (52%)
Query: 282 STEPG-VLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSV 340
S +PG L +G + I +W G + LVGH N V + + G K +L SC+
Sbjct: 239 SGKPGPFLLSGSRDKTIKMWDV-STGMCLMT---LVGHDNWVRGVLFHSGGKFIL-SCAD 293
Query: 341 DLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLR 396
D ++R+WD + K CM TL NAH V + +++T P +V+G D + VW+ R
Sbjct: 294 DKTLRVWDYK---NKRCMKTL-NAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 345
Score = 122 (48.0 bits), Expect = 0.00028, P = 0.00028
Identities = 42/158 (26%), Positives = 72/158 (45%)
Query: 287 VLATGDCKRNI--HIWTPREAGAWQVDQK--PLVGHTNSVEDLQWSPGEKRVLASCSVDL 342
V+AT +CK + H E +W + + T S PG L S S D
Sbjct: 197 VVATKECKAELREHEHVV-ECISWAPESSYSSISEATGSETKKSGKPGP--FLLSGSRDK 253
Query: 343 SIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGS 402
+I++WD ++T C++TL H + V + ++ I+S DD + VWD +K
Sbjct: 254 TIKMWD---VSTGMCLMTLVG-HDNWVRGVLFHSGGKFILSCADDKTLRVWD---YKNKR 306
Query: 403 SVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWD 440
+ T H VT++++H T + +G D + +W+
Sbjct: 307 CMKTLNAHEHFVTSLDFHKT-APYVVTGSVDQTVKVWE 343
Score = 54 (24.1 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 731 LVGHTNSVEDLQWSPGEKRVLASCSVDRSNRI 762
LVGH N V + + G K +L SC+ D++ R+
Sbjct: 269 LVGHDNWVRGVLFHSGGKFIL-SCADDKTLRV 299
>UNIPROTKB|F1S687 [details] [associations]
symbol:PEX7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0008611 "ether lipid biosynthetic process" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005782 "peroxisomal matrix"
evidence=IEA] [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=IEA] [GO:0001958 "endochondral ossification"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0001764 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782 GO:GO:0008611
GO:GO:0016558 GO:GO:0001958 OMA:GHEYAVR GO:GO:0005053
GeneTree:ENSGT00700000104578 EMBL:CU407212
ProteinModelPortal:F1S687 Ensembl:ENSSSCT00000004599 Uniprot:F1S687
Length = 315
Score = 185 (70.2 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 41/125 (32%), Positives = 66/125 (52%)
Query: 319 TNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRT- 377
T+++ D+ WS + VL +CS D S+++WDT + L + HT +V + W++T
Sbjct: 67 TDALFDVTWSENNEHVLVTCSGDGSLQLWDTA---GAAGPLQVYKEHTQEVYSVDWSQTR 123
Query: 378 -EPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQI 436
E L+VSG D + +WD G S+ TFK H + + + W P FAS D +
Sbjct: 124 GEQLVVSGSWDQTVKLWDPT---VGRSLCTFKGHESIIYSTIWSPHIPGCFASASGDQTL 180
Query: 437 ALWDL 441
+WD+
Sbjct: 181 RIWDV 185
Score = 183 (69.5 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 50/181 (27%), Positives = 83/181 (45%)
Query: 264 PLFSFSGHLTEGFAMDWSSTE-PGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSV 322
PL + H E +++DWS T ++ +G + + +W P G K GH + +
Sbjct: 103 PLQVYKEHTQEVYSVDWSQTRGEQLVVSGSWDQTVKLWDPT-VGRSLCTFK---GHESII 158
Query: 323 EDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR-TEPLI 381
WSP AS S D ++RIWD + T + +P AH +++ W + E L+
Sbjct: 159 YSTIWSPHIPGCFASASGDQTLRIWD---VKTTGVRIVVP-AHQAEILSCDWCKYNENLL 214
Query: 382 VSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDL 441
V+G D + WDLR ++ V HT + V++ P +S AS D + W+
Sbjct: 215 VTGAVDCSLRGWDLRNVRQ--PVFELLGHTYAIRRVKFSPFYASVLASCSYDFTVRFWNF 272
Query: 442 A 442
+
Sbjct: 273 S 273
Score = 135 (52.6 bits), Expect = 8.3e-06, P = 8.3e-06
Identities = 45/179 (25%), Positives = 72/179 (40%)
Query: 276 FAMDWSSTEPGVLATGDCKRNIHIW-TPREAGAWQVDQKPLVGHTNSVEDLQWSP--GEK 332
F + WS VL T ++ +W T AG QV ++ HT V + WS GE+
Sbjct: 71 FDVTWSENNEHVLVTCSGDGSLQLWDTAGAAGPLQVYKE----HTQEVYSVDWSQTRGEQ 126
Query: 333 RVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEP-LIVSGGDDGCIH 391
V++ S D ++++WD V C H S + W+ P S D +
Sbjct: 127 LVVSG-SWDQTVKLWDPTV-GRSLCTF---KGHESIIYSTIWSPHIPGCFASASGDQTLR 181
Query: 392 VWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIE 450
+WD++ G + H A + + +W + +G D + WDL R E
Sbjct: 182 IWDVKT--TGVRIVV-PAHQAEILSCDWCKYNENLLVTGAVDCSLRGWDLRNVRQPVFE 237
Score = 134 (52.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 54/234 (23%), Positives = 92/234 (39%)
Query: 180 FAMDWSSTEPGVLATGDCKRNIHIW-TPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTAL 238
F + WS VL T ++ +W T AG QV ++ HT + WS +
Sbjct: 71 FDVTWSENNEHVLVTCSGDGSLQLWDTAGAAGPLQVYKE----HTQEVYSVDWSQTRGEQ 126
Query: 239 QTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIH 298
V + + K P + L +F GH + ++ WS PG A+ + +
Sbjct: 127 LVVSGSW---DQTVKLWD-PTVGRS-LCTFKGHESIIYSTIWSPHIPGCFASASGDQTLR 181
Query: 299 IWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCM 358
IW + G V + H + W + +L + +VD S+R WD R N + +
Sbjct: 182 IWDVKTTGVRIV----VPAHQAEILSCDWCKYNENLLVTGAVDCSLRGWDLR--NVRQPV 235
Query: 359 LTLPNAHTSDVNVISWNRT-EPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHT 411
L HT + + ++ ++ S D + W+ K + T +HHT
Sbjct: 236 FELLG-HTYAIRRVKFSPFYASVLASCSYDFTVRFWNFS--KPNPLLETVEHHT 286
Score = 130 (50.8 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 46/183 (25%), Positives = 74/183 (40%)
Query: 168 PLFSFSGHLTEGFAMDWSSTE-PGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSA 226
PL + H E +++DWS T ++ +G + + +W P G K GH +
Sbjct: 103 PLQVYKEHTQEVYSVDWSQTRGEQLVVSGSWDQTVKLWDPT-VGRSLCTFK---GHESII 158
Query: 227 EDLQWSD-LKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEP 285
WS + + L + K G I P H E + DW
Sbjct: 159 YSTIWSPHIPGCFASASGDQTLRIWDVKT-TGVRIVVP------AHQAEILSCDWCKYNE 211
Query: 286 GVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIR 345
+L TG ++ W R + L+GHT ++ +++SP VLASCS D ++R
Sbjct: 212 NLLVTGAVDCSLRGWDLRNVRQPVFE---LLGHTYAIRRVKFSPFYASVLASCSYDFTVR 268
Query: 346 IWD 348
W+
Sbjct: 269 FWN 271
>MGI|MGI:1346998 [details] [associations]
symbol:Ciao1 "cytosolic iron-sulfur protein assembly 1"
species:10090 "Mus musculus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0007059 "chromosome segregation" evidence=IEA]
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISO]
[GO:0071817 "MMXD complex" evidence=ISO] [GO:0097361 "CIA complex"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1346998 GO:GO:0007059 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0003700 GO:GO:0006357 GO:GO:0016226 GO:GO:0071817 HSSP:P16649
HOGENOM:HOG000208901 OMA:SWKCVCT CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 ChiTaRS:CIAO1 EMBL:AK002314 EMBL:AK028376
EMBL:AL845368 EMBL:BC004089 IPI:IPI00320161 RefSeq:NP_079572.2
UniGene:Mm.45179 ProteinModelPortal:Q99KN2 SMR:Q99KN2 IntAct:Q99KN2
STRING:Q99KN2 PhosphoSite:Q99KN2 PaxDb:Q99KN2 PRIDE:Q99KN2
Ensembl:ENSMUST00000003759 GeneID:26371 KEGG:mmu:26371
UCSC:uc008mfb.2 InParanoid:Q99KN2 NextBio:304265 Bgee:Q99KN2
Genevestigator:Q99KN2 Uniprot:Q99KN2
Length = 339
Score = 164 (62.8 bits), Expect = 5.7e-09, P = 5.7e-09
Identities = 59/235 (25%), Positives = 105/235 (44%)
Query: 315 LVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISW 374
L GH N V+ + W+P +LA+CS D S+ +W+ + C+ L ++HT DV + W
Sbjct: 101 LEGHENEVKSVAWAPSGN-LLATCSRDKSVWVWEVDEEDEYECVSVL-SSHTQDVKHVVW 158
Query: 375 NRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADD 434
+ ++ L+ S D + ++ AT + H + V ++ + P+ AS D
Sbjct: 159 HPSQELLASASYDDTVKLYQ-EEGDDWVCCATLEGHESTVWSIAFDPS-GQRLASCSDDR 216
Query: 435 QIALWDLAVERDSEIEQREAELKDLPSQLLFIHLG---QKEIKELHWHPQLPGTIISTA- 490
+ +W + + EQ A PS L + I ++ W QL G + +
Sbjct: 217 TVRIWRQYLPGN---EQGVACSGSDPSWKCICTLSGFHTRTIYDVAWC-QLTGALATACG 272
Query: 491 NSGFNIFRTI--SDLPSQLLF---IHLGQKEIKELH---WHPQLPGTIISTANSG 537
+ +F SD P Q F HL Q ++++ W+P+ PG + S ++ G
Sbjct: 273 DDAIRVFEEDPGSD-PQQPTFSLTAHLRQAHSQDVNCVAWNPKEPGLLASCSDDG 326
Score = 162 (62.1 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 44/153 (28%), Positives = 69/153 (45%)
Query: 287 VLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRI 346
+LA+ R I IW E +W GH +V + WSP LAS S D + I
Sbjct: 30 LLASCGGDRKIRIWGT-EGDSWICKSVLSEGHQRTVRKVAWSPCGN-YLASASFDATTCI 87
Query: 347 WDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVAT 406
W + + C+ TL H ++V ++W + L+ + D + VW++ + V+
Sbjct: 88 WKKNQDDFE-CVTTL-EGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSV 145
Query: 407 FKHHTAPVTTVEWHPTESSTFASGGADDQIALW 439
HT V V WHP++ AS DD + L+
Sbjct: 146 LSSHTQDVKHVVWHPSQE-LLASASYDDTVKLY 177
Score = 122 (48.0 bits), Expect = 0.00027, P = 0.00027
Identities = 56/244 (22%), Positives = 100/244 (40%)
Query: 171 SFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQ 230
+ GH E ++ W+ + +LAT +++ +W E ++ L HT + +
Sbjct: 100 TLEGHENEVKSVAWAPSG-NLLATCSRDKSVWVWEVDEEDEYEC-VSVLSSHTQDVKHVV 157
Query: 231 WSDLKTALQTV--DDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVL 288
W + L + DD +L + G + GH + +++ + + +
Sbjct: 158 WHPSQELLASASYDDTVKLYQEE-------GDDWVCCATLEGHESTVWSIAFDPSGQRLA 210
Query: 289 ATGDCKRNIHIWT---P-REAGAWQVDQKP-------LVG-HTNSVEDLQWSPGEKRVLA 336
+ D R + IW P E G P L G HT ++ D+ W +
Sbjct: 211 SCSD-DRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHTRTIYDVAWCQLTGALAT 269
Query: 337 SCSVDLSIRIWDTRVIN-----TKSCMLTLPNAHTSDVNVISWNRTEP-LIVSGGDDGCI 390
+C D +IR+++ + T S L AH+ DVN ++WN EP L+ S DDG +
Sbjct: 270 ACGDD-AIRVFEEDPGSDPQQPTFSLTAHLRQAHSQDVNCVAWNPKEPGLLASCSDDGEV 328
Query: 391 HVWD 394
W+
Sbjct: 329 AFWE 332
Score = 69 (29.3 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 24/77 (31%), Positives = 34/77 (44%)
Query: 616 W-DLKTALQTV--DDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMD-----WSST 667
W L AL T DD ++ E + G P PT FS + HL + + D W+
Sbjct: 260 WCQLTGALATACGDDAIRVFEEDP--GSDPQQPT---FSLTAHLRQAHSQDVNCVAWNPK 314
Query: 668 EPGVLATGDCKRNIHIW 684
EPG+LA+ + W
Sbjct: 315 EPGLLASCSDDGEVAFW 331
Score = 63 (27.2 bits), Expect = 7.9e-11, Sum P(2) = 7.9e-11
Identities = 20/60 (33%), Positives = 31/60 (51%)
Query: 703 VLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRI 762
+LA+ + ++ E W V L GH ++V + + P +R LASCS DR+ RI
Sbjct: 164 LLASASYDDTVKLYQ-EEGDDW-VCCATLEGHESTVWSIAFDPSGQR-LASCSDDRTVRI 220
Score = 58 (25.5 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 734 HTNSVEDLQWSPGEKRVLASCSVD 757
H+ V + W+P E +LASCS D
Sbjct: 302 HSQDVNCVAWNPKEPGLLASCSDD 325
>UNIPROTKB|F1P2Y8 [details] [associations]
symbol:WDR12 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0005654 "nucleoplasm" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0030687 "preribosome, large subunit precursor"
evidence=IEA] [GO:0070545 "PeBoW complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 OMA:LQTRFFT
GeneTree:ENSGT00640000091456 EMBL:AADN02019869 IPI:IPI00587836
Ensembl:ENSGALT00000013803 Uniprot:F1P2Y8
Length = 411
Score = 188 (71.2 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 66/211 (31%), Positives = 100/211 (47%)
Query: 231 WSDLKTALQTVDDPFQLAEHNKKRGKGP--GIPTPPLFSFSGHLTEGFA-MDWSSTEPGV 287
WS + T + D+ + A +K+ K G+ PL + SGH TE + + WS E
Sbjct: 204 WSAVPTDEE--DEMEEAANRPRKKQKTEQLGLTRTPLATLSGH-TEAISSVLWSDAEEIC 260
Query: 288 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSV-EDLQWSPGEKRVLASCSVDLSIRI 346
A+ D I +W G + L G N V + +SP +R LAS S D IR+
Sbjct: 261 SASWD--HTIKLWDAETGGL----KSTLTG--NKVFNSVSYSPLCRR-LASGSTDRHIRL 311
Query: 347 WDTRVINTKSCMLTLPNAHTSDVNVISWNRT-EPLIVSGGDDGCIHVWDLRRFKKGSSVA 405
WD R + +L+L +HT V + W+ T E ++SG D + +WD R K + +
Sbjct: 312 WDPRSKDGSLVLLSL-TSHTGWVTSVKWSPTHEHQLISGSLDNIVKLWDTRSCK--APLY 368
Query: 406 TFKHHTAPVTTVEWHPTESSTFASGGADDQI 436
H V V+W TE+ SGGAD+++
Sbjct: 369 DLAAHEDKVLCVDW--TEAGLLLSGGADNKL 397
Score = 172 (65.6 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 79/295 (26%), Positives = 118/295 (40%)
Query: 180 FAMDWSS----TEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQW--SD 233
F DW S TE +L TG + IW+ + GHT +D+ W D
Sbjct: 87 FHDDWISSVQATEEWIL-TGCYDQTARIWSLEGKSIMTI-----AGHTEVVKDVAWVKQD 140
Query: 234 LKTAL---QTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHL--TEGFAMDWSSTEPGVL 288
+ L ++D L E N ++ K L GH + A+D + T+
Sbjct: 141 SLSCLLISASMDQTILLWEWNVEKNK-----VKALHCCRGHAGSVDSVAVDCTRTK---F 192
Query: 289 ATGDCKRNIHIWT----------------PR------EAGAWQVDQKPLVGHTNSVEDLQ 326
+G + + IW+ PR + G + L GHT ++ +
Sbjct: 193 CSGSWDKMLKIWSAVPTDEEDEMEEAANRPRKKQKTEQLGLTRTPLATLSGHTEAISSVL 252
Query: 327 WSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGD 386
WS E+ + S S D +I++WD KS TL N +S++ + SG
Sbjct: 253 WSDAEE--ICSASWDHTIKLWDAETGGLKS---TLTGNKV--FNSVSYSPLCRRLASGST 305
Query: 387 DGCIHVWDLRRFKKGSSVA-TFKHHTAPVTTVEWHPTESSTFASGGADDQIALWD 440
D I +WD R K GS V + HT VT+V+W PT SG D+ + LWD
Sbjct: 306 DRHIRLWDPRS-KDGSLVLLSLTSHTGWVTSVKWSPTHEHQLISGSLDNIVKLWD 359
Score = 140 (54.3 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 35/106 (33%), Positives = 54/106 (50%)
Query: 288 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIW 347
LA+G R+I +W PR V L HT V ++WSP + L S S+D +++W
Sbjct: 300 LASGSTDRHIRLWDPRSKDGSLV-LLSLTSHTGWVTSVKWSPTHEHQLISGSLDNIVKLW 358
Query: 348 DTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVW 393
DTR + K+ + L AH V + W L++SGG D ++ +
Sbjct: 359 DTR--SCKAPLYDLA-AHEDKVLCVDWTEAG-LLLSGGADNKLYCY 400
Score = 122 (48.0 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 50/184 (27%), Positives = 73/184 (39%)
Query: 586 HRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGP--G 643
H G ++ V + +G W ++ K IW D+ + A +K+ K G
Sbjct: 176 HAGSVDSVAVDCTRTKFCSGSWDKMLK--IWSA-VPTDEEDEMEEAANRPRKKQKTEQLG 232
Query: 644 IPTPPLFSFSGHLTEGFA-MDWSSTEPGVLATGDCKRNIHIWTPREAGAWSVYLYTNRFG 702
+ PL + SGH TE + + WS E A+ D I +W G S F
Sbjct: 233 LTRTPLATLSGH-TEAISSVLWSDAEEICSASWD--HTIKLWDAETGGLKSTLTGNKVFN 289
Query: 703 V---------LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLAS 753
LA+G R+I +W PR V L HT V ++WSP + L S
Sbjct: 290 SVSYSPLCRRLASGSTDRHIRLWDPRSKDGSLV-LLSLTSHTGWVTSVKWSPTHEHQLIS 348
Query: 754 CSVD 757
S+D
Sbjct: 349 GSLD 352
Score = 84 (34.6 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 24/78 (30%), Positives = 35/78 (44%)
Query: 371 VISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESST--FA 428
+ S TE I++G D +W L +G S+ T HT V V W +S +
Sbjct: 92 ISSVQATEEWILTGCYDQTARIWSL----EGKSIMTIAGHTEVVKDVAWVKQDSLSCLLI 147
Query: 429 SGGADDQIALWDLAVERD 446
S D I LW+ VE++
Sbjct: 148 SASMDQTILLWEWNVEKN 165
Score = 53 (23.7 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 10/37 (27%), Positives = 19/37 (51%)
Query: 648 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIW 684
PL+ + H + +DW TE G+L +G ++ +
Sbjct: 366 PLYDLAAHEDKVLCVDW--TEAGLLLSGGADNKLYCY 400
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 179 (68.1 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 59/206 (28%), Positives = 101/206 (49%)
Query: 252 KKRGKGPGIPTPP-LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQV 310
+KR IP PP ++ SGH + + + V+ + I +W E G ++
Sbjct: 87 QKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVF-SVMVSASEDATIKVWD-YETGDFE- 143
Query: 311 DQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVN 370
+ L GHT+SVED+ + K +LASCS D++I++WD + C+ T+ + H +V+
Sbjct: 144 --RTLKGHTDSVEDISFDHSGK-LLASCSADMTIKLWDFQGFE---CIRTM-HGHDHNVS 196
Query: 371 VISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASG 430
++ IVS D I +W+++ G V TF H V V P + T +
Sbjct: 197 SVAIMPNGDHIVSASRDKTIKMWEVQT---GYCVKTFTGHREWVRMVR--PNQDGTLIAS 251
Query: 431 GADDQ-IALWDLAVERDSEIEQREAE 455
++DQ + +W +A ++ + E RE E
Sbjct: 252 CSNDQTVRVWVVAT-KECKAELREHE 276
Score = 148 (57.2 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 40/116 (34%), Positives = 61/116 (52%)
Query: 282 STEPG-VLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSV 340
S +PG L +G + I +W G + LVGH N V + + G K +L SC+
Sbjct: 304 SGKPGPFLLSGSRDKTIKMWDV-STGMCLMT---LVGHDNWVRGVLFHSGGKFIL-SCAD 358
Query: 341 DLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLR 396
D ++R+WD + K CM TL NAH V + +++T P +V+G D + VW+ R
Sbjct: 359 DKTLRVWDYK---NKRCMKTL-NAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 122 (48.0 bits), Expect = 0.00038, P = 0.00038
Identities = 42/158 (26%), Positives = 72/158 (45%)
Query: 287 VLATGDCKRNI--HIWTPREAGAWQVDQK--PLVGHTNSVEDLQWSPGEKRVLASCSVDL 342
V+AT +CK + H E +W + + T S PG L S S D
Sbjct: 262 VVATKECKAELREHEHVV-ECISWAPESSYSSISEATGSETKKSGKPGP--FLLSGSRDK 318
Query: 343 SIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGS 402
+I++WD ++T C++TL H + V + ++ I+S DD + VWD +K
Sbjct: 319 TIKMWD---VSTGMCLMTLVG-HDNWVRGVLFHSGGKFILSCADDKTLRVWD---YKNKR 371
Query: 403 SVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWD 440
+ T H VT++++H T + +G D + +W+
Sbjct: 372 CMKTLNAHEHFVTSLDFHKT-APYVVTGSVDQTVKVWE 408
Score = 54 (24.1 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 731 LVGHTNSVEDLQWSPGEKRVLASCSVDRSNRI 762
LVGH N V + + G K +L SC+ D++ R+
Sbjct: 334 LVGHDNWVRGVLFHSGGKFIL-SCADDKTLRV 364
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 187 (70.9 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 45/135 (33%), Positives = 68/135 (50%)
Query: 307 AWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHT 366
AW++ + +V H ++V L R+LA+ D + +W IN +C+++L HT
Sbjct: 10 AWKLQE--IVAHASNVSSLVLGKASGRLLATGGDDCRVNLWS---INKPNCIMSL-TGHT 63
Query: 367 SDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESST 426
S V + N E LIV+G G I VWDL K + T H A + ++++HP
Sbjct: 64 SPVESVRLNTPEELIVAGSQSGSIRVWDLEAAK---ILRTLMGHKANICSLDFHPY-GEF 119
Query: 427 FASGGADDQIALWDL 441
ASG D I LWD+
Sbjct: 120 VASGSQDTNIKLWDI 134
Score = 159 (61.0 bits), Expect = 7.4e-08, P = 7.4e-08
Identities = 57/213 (26%), Positives = 97/213 (45%)
Query: 265 LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVED 324
L + GH ++D+ V A+G NI +W R G V + GH+ +V
Sbjct: 98 LRTLMGHKANICSLDFHPYGEFV-ASGSQDTNIKLWDIRRKGC--VFRYR--GHSQAVRC 152
Query: 325 LQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSG 384
L++SP K LAS + D ++++WD + M P HT VNV+ ++ E L+ SG
Sbjct: 153 LRFSPDGKW-LASAADDHTVKLWD---LTAGKMMSEFPG-HTGPVNVVEFHPNEYLLASG 207
Query: 385 GDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444
D I WDL +F+ V+ + PV +V ++P ++ G D + ++ E
Sbjct: 208 SSDRTIRFWDLEKFQV---VSCIEGEPGPVRSVLFNPDGCCLYS--GCQDSLRVYGWEPE 262
Query: 445 RDSEIEQ----REAELKDLPSQLLFIHLGQKEI 473
R ++ + A+L QL+ + Q +
Sbjct: 263 RCFDVVLVNWGKVADLAICNDQLIGVAFSQSNV 295
Score = 53 (23.7 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 19/59 (32%), Positives = 31/59 (52%)
Query: 704 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRI 762
+A+G NI +W R G V + GH+ +V L++SP K LAS + D + ++
Sbjct: 120 VASGSQDTNIKLWDIRRKGC--VFRYR--GHSQAVRCLRFSPDGKW-LASAADDHTVKL 173
Score = 39 (18.8 bits), Expect = 5.8e-10, Sum P(2) = 5.8e-10
Identities = 21/85 (24%), Positives = 35/85 (41%)
Query: 694 VYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLAS 753
V + N + +LA+G R I W + +QV + G V + ++P + +
Sbjct: 195 VEFHPNEY-LLASGSSDRTIRFW---DLEKFQV-VSCIEGEPGPVRSVLFNPDGCCLYSG 249
Query: 754 CSVDRSNRIGARRDMLYCFFVSLVH 778
C D G + CF V LV+
Sbjct: 250 CQ-DSLRVYGWEPER--CFDVVLVN 271
Score = 38 (18.4 bits), Expect = 7.4e-10, Sum P(2) = 7.4e-10
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 652 FSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIW 684
F GH +++ E +LA+G R I W
Sbjct: 185 FPGHTGPVNVVEFHPNEY-LLASGSSDRTIRFW 216
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 187 (70.9 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 45/135 (33%), Positives = 68/135 (50%)
Query: 307 AWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHT 366
AW++ + +V H ++V L R+LA+ D + +W IN +C+++L HT
Sbjct: 10 AWKLQE--IVAHASNVSSLVLGKASGRLLATGGDDCRVNLWS---INKPNCIMSL-TGHT 63
Query: 367 SDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESST 426
S V + N E LIV+G G I VWDL K + T H A + ++++HP
Sbjct: 64 SPVESVRLNTPEELIVAGSQSGSIRVWDLEAAK---ILRTLMGHKANICSLDFHPY-GEF 119
Query: 427 FASGGADDQIALWDL 441
ASG D I LWD+
Sbjct: 120 VASGSQDTNIKLWDI 134
Score = 159 (61.0 bits), Expect = 7.4e-08, P = 7.4e-08
Identities = 57/213 (26%), Positives = 97/213 (45%)
Query: 265 LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVED 324
L + GH ++D+ V A+G NI +W R G V + GH+ +V
Sbjct: 98 LRTLMGHKANICSLDFHPYGEFV-ASGSQDTNIKLWDIRRKGC--VFRYR--GHSQAVRC 152
Query: 325 LQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSG 384
L++SP K LAS + D ++++WD + M P HT VNV+ ++ E L+ SG
Sbjct: 153 LRFSPDGKW-LASAADDHTVKLWD---LTAGKMMSEFPG-HTGPVNVVEFHPNEYLLASG 207
Query: 385 GDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444
D I WDL +F+ V+ + PV +V ++P ++ G D + ++ E
Sbjct: 208 SSDRTIRFWDLEKFQV---VSCIEGEPGPVRSVLFNPDGCCLYS--GCQDSLRVYGWEPE 262
Query: 445 RDSEIEQ----REAELKDLPSQLLFIHLGQKEI 473
R ++ + A+L QL+ + Q +
Sbjct: 263 RCFDVVLVNWGKVADLAICNDQLIGVAFSQSNV 295
Score = 53 (23.7 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 19/59 (32%), Positives = 31/59 (52%)
Query: 704 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRI 762
+A+G NI +W R G V + GH+ +V L++SP K LAS + D + ++
Sbjct: 120 VASGSQDTNIKLWDIRRKGC--VFRYR--GHSQAVRCLRFSPDGKW-LASAADDHTVKL 173
Score = 39 (18.8 bits), Expect = 5.8e-10, Sum P(2) = 5.8e-10
Identities = 21/85 (24%), Positives = 35/85 (41%)
Query: 694 VYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLAS 753
V + N + +LA+G R I W + +QV + G V + ++P + +
Sbjct: 195 VEFHPNEY-LLASGSSDRTIRFW---DLEKFQV-VSCIEGEPGPVRSVLFNPDGCCLYSG 249
Query: 754 CSVDRSNRIGARRDMLYCFFVSLVH 778
C D G + CF V LV+
Sbjct: 250 CQ-DSLRVYGWEPER--CFDVVLVN 271
Score = 38 (18.4 bits), Expect = 7.4e-10, Sum P(2) = 7.4e-10
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 652 FSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIW 684
F GH +++ E +LA+G R I W
Sbjct: 185 FPGHTGPVNVVEFHPNEY-LLASGSSDRTIRFW 216
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 187 (70.9 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 45/135 (33%), Positives = 68/135 (50%)
Query: 307 AWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHT 366
AW++ + +V H ++V L R+LA+ D + +W IN +C+++L HT
Sbjct: 10 AWKLQE--IVAHASNVSSLVLGKASGRLLATGGDDCRVNLWS---INKPNCIMSL-TGHT 63
Query: 367 SDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESST 426
S V + N E LIV+G G I VWDL K + T H A + ++++HP
Sbjct: 64 SPVESVRLNTPEELIVAGSQSGSIRVWDLEAAK---ILRTLMGHKANICSLDFHPY-GEF 119
Query: 427 FASGGADDQIALWDL 441
ASG D I LWD+
Sbjct: 120 VASGSQDTNIKLWDI 134
Score = 159 (61.0 bits), Expect = 7.4e-08, P = 7.4e-08
Identities = 57/213 (26%), Positives = 97/213 (45%)
Query: 265 LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVED 324
L + GH ++D+ V A+G NI +W R G V + GH+ +V
Sbjct: 98 LRTLMGHKANICSLDFHPYGEFV-ASGSQDTNIKLWDIRRKGC--VFRYR--GHSQAVRC 152
Query: 325 LQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSG 384
L++SP K LAS + D ++++WD + M P HT VNV+ ++ E L+ SG
Sbjct: 153 LRFSPDGKW-LASAADDHTVKLWD---LTAGKMMSEFPG-HTGPVNVVEFHPNEYLLASG 207
Query: 385 GDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444
D I WDL +F+ V+ + PV +V ++P ++ G D + ++ E
Sbjct: 208 SSDRTIRFWDLEKFQV---VSCIEGEPGPVRSVLFNPDGCCLYS--GCQDSLRVYGWEPE 262
Query: 445 RDSEIEQ----REAELKDLPSQLLFIHLGQKEI 473
R ++ + A+L QL+ + Q +
Sbjct: 263 RCFDVVLVSWGKVADLAVCNDQLIGVAFSQSNV 295
Score = 53 (23.7 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 19/59 (32%), Positives = 31/59 (52%)
Query: 704 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRI 762
+A+G NI +W R G V + GH+ +V L++SP K LAS + D + ++
Sbjct: 120 VASGSQDTNIKLWDIRRKGC--VFRYR--GHSQAVRCLRFSPDGKW-LASAADDHTVKL 173
Score = 38 (18.4 bits), Expect = 7.4e-10, Sum P(2) = 7.4e-10
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 652 FSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIW 684
F GH +++ E +LA+G R I W
Sbjct: 185 FPGHTGPVNVVEFHPNEY-LLASGSSDRTIRFW 216
Score = 38 (18.4 bits), Expect = 7.4e-10, Sum P(2) = 7.4e-10
Identities = 21/84 (25%), Positives = 34/84 (40%)
Query: 694 VYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLAS 753
V + N + +LA+G R I W + +QV + G V + ++P + +
Sbjct: 195 VEFHPNEY-LLASGSSDRTIRFW---DLEKFQV-VSCIEGEPGPVRSVLFNPDGCCLYSG 249
Query: 754 CSVDRSNRIGARRDMLYCFFVSLV 777
C D G + CF V LV
Sbjct: 250 CQ-DSLRVYGWEPER--CFDVVLV 270
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 187 (70.9 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 45/135 (33%), Positives = 68/135 (50%)
Query: 307 AWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHT 366
AW++ + +V H ++V L R+LA+ D + +W IN +C+++L HT
Sbjct: 10 AWKLQE--IVAHASNVSSLVLGKASGRLLATGGDDCRVNLWS---INKPNCIMSL-TGHT 63
Query: 367 SDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESST 426
S V + N E LIV+G G I VWDL K + T H A + ++++HP
Sbjct: 64 SPVESVRLNTPEELIVAGSQSGSIRVWDLEAAK---ILRTLMGHKANICSLDFHPY-GEF 119
Query: 427 FASGGADDQIALWDL 441
ASG D I LWD+
Sbjct: 120 VASGSQDTNIKLWDI 134
Score = 159 (61.0 bits), Expect = 7.5e-08, P = 7.5e-08
Identities = 57/213 (26%), Positives = 97/213 (45%)
Query: 265 LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVED 324
L + GH ++D+ V A+G NI +W R G V + GH+ +V
Sbjct: 98 LRTLMGHKANICSLDFHPYGEFV-ASGSQDTNIKLWDIRRKGC--VFRYR--GHSQAVRC 152
Query: 325 LQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSG 384
L++SP K LAS + D ++++WD + M P HT VNV+ ++ E L+ SG
Sbjct: 153 LRFSPDGKW-LASAADDHTVKLWD---LTAGKMMSEFPG-HTGPVNVVEFHPNEYLLASG 207
Query: 385 GDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444
D I WDL +F+ V+ + PV +V ++P ++ G D + ++ E
Sbjct: 208 SSDRTIRFWDLEKFQV---VSCIEGEPGPVRSVLFNPDGCCLYS--GCQDSLRVYGWEPE 262
Query: 445 RDSEIEQ----REAELKDLPSQLLFIHLGQKEI 473
R ++ + A+L QL+ + Q +
Sbjct: 263 RCFDVVLVNWGKVADLAICNDQLIGVAFSQSNV 295
Score = 53 (23.7 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 19/59 (32%), Positives = 31/59 (52%)
Query: 704 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRI 762
+A+G NI +W R G V + GH+ +V L++SP K LAS + D + ++
Sbjct: 120 VASGSQDTNIKLWDIRRKGC--VFRYR--GHSQAVRCLRFSPDGKW-LASAADDHTVKL 173
Score = 39 (18.8 bits), Expect = 5.9e-10, Sum P(2) = 5.9e-10
Identities = 21/85 (24%), Positives = 35/85 (41%)
Query: 694 VYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLAS 753
V + N + +LA+G R I W + +QV + G V + ++P + +
Sbjct: 195 VEFHPNEY-LLASGSSDRTIRFW---DLEKFQV-VSCIEGEPGPVRSVLFNPDGCCLYSG 249
Query: 754 CSVDRSNRIGARRDMLYCFFVSLVH 778
C D G + CF V LV+
Sbjct: 250 CQ-DSLRVYGWEPER--CFDVVLVN 271
Score = 38 (18.4 bits), Expect = 7.5e-10, Sum P(2) = 7.5e-10
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 652 FSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIW 684
F GH +++ E +LA+G R I W
Sbjct: 185 FPGHTGPVNVVEFHPNEY-LLASGSSDRTIRFW 216
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 187 (70.9 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 45/135 (33%), Positives = 68/135 (50%)
Query: 307 AWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHT 366
AW++ + +V H ++V L R+LA+ D + +W IN +C+++L HT
Sbjct: 10 AWKLQE--IVAHASNVSSLVLGKASGRLLATGGDDCRVNLWS---INKPNCIMSL-TGHT 63
Query: 367 SDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESST 426
S V + N E LIV+G G I VWDL K + T H A + ++++HP
Sbjct: 64 SPVESVRLNTPEELIVAGSQSGSIRVWDLEAAK---ILRTLMGHKANICSLDFHPY-GEF 119
Query: 427 FASGGADDQIALWDL 441
ASG D I LWD+
Sbjct: 120 VASGSQDTNIKLWDI 134
Score = 159 (61.0 bits), Expect = 7.6e-08, P = 7.6e-08
Identities = 56/213 (26%), Positives = 98/213 (46%)
Query: 265 LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVED 324
L + GH ++D+ V A+G NI +W R G V + GH+ +V
Sbjct: 98 LRTLMGHKANICSLDFHPYGEFV-ASGSQDTNIKLWDIRRKGC--VFRYR--GHSQAVRC 152
Query: 325 LQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSG 384
L++SP K LAS + D ++++WD + M P HT VNV+ ++ E L+ SG
Sbjct: 153 LRFSPDGKW-LASAADDHTVKLWD---LTAGKMMSEFPG-HTGPVNVVEFHPNEYLLASG 207
Query: 385 GDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444
D I WDL +F+ V+ + PV ++ ++P ++ G D + ++ E
Sbjct: 208 SSDRTIRFWDLEKFQV---VSCIEGEPGPVRSILFNPDGCCLYS--GCQDSLRVYGWEPE 262
Query: 445 RDSEIEQ----REAELKDLPSQLLFIHLGQKEI 473
R ++ + A+L +QL+ + Q +
Sbjct: 263 RCFDVVLVHWGKVADLAICNNQLIGVAFSQSNV 295
Score = 53 (23.7 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 19/59 (32%), Positives = 31/59 (52%)
Query: 704 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRI 762
+A+G NI +W R G V + GH+ +V L++SP K LAS + D + ++
Sbjct: 120 VASGSQDTNIKLWDIRRKGC--VFRYR--GHSQAVRCLRFSPDGKW-LASAADDHTVKL 173
Score = 47 (21.6 bits), Expect = 9.1e-11, Sum P(2) = 9.1e-11
Identities = 22/85 (25%), Positives = 35/85 (41%)
Query: 694 VYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLAS 753
V + N + +LA+G R I W + +QV + G V + ++P + +
Sbjct: 195 VEFHPNEY-LLASGSSDRTIRFW---DLEKFQV-VSCIEGEPGPVRSILFNPDGCCLYSG 249
Query: 754 CSVDRSNRIGARRDMLYCFFVSLVH 778
C D G + CF V LVH
Sbjct: 250 CQ-DSLRVYGWEPER--CFDVVLVH 271
Score = 38 (18.4 bits), Expect = 7.7e-10, Sum P(2) = 7.7e-10
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 652 FSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIW 684
F GH +++ E +LA+G R I W
Sbjct: 185 FPGHTGPVNVVEFHPNEY-LLASGSSDRTIRFW 216
>UNIPROTKB|I3LTI2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001826 "inner cell mass
cell differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 InterPro:IPR011047 SUPFAM:SSF50998
PRINTS:PR00319 GO:GO:0001826 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 EMBL:FP565655
RefSeq:XP_003358201.1 Ensembl:ENSSSCT00000026878 GeneID:100626208
KEGG:ssc:100626208 Uniprot:I3LTI2
Length = 485
Score = 191 (72.3 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 50/155 (32%), Positives = 76/155 (49%)
Query: 288 LATGDCKRNIHIWTPREAGAWQVDQKPLV---GHTNSVEDLQWSPGEKRVLASCSVDLSI 344
L +G + +W+P E D+KPL GH + + +SP + R++AS S D SI
Sbjct: 344 LVSGSDDFTLFLWSPAE------DKKPLARMTGHQALINQVLFSP-DSRIIASASFDKSI 396
Query: 345 RIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSV 404
++WD R T + +L H + V I+W+ L+VSG D + VWD++ K
Sbjct: 397 KLWDGR---TGKYLASL-RGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLA--- 449
Query: 405 ATFKHHTAPVTTVEWHPTESSTFASGGADDQIALW 439
A H V V+W P + ASGG D + +W
Sbjct: 450 ADLPGHADEVYAVDWSP-DGQRVASGGKDKCLRIW 483
Score = 142 (55.0 bits), Expect = 8.6e-09, Sum P(2) = 8.6e-09
Identities = 52/159 (32%), Positives = 69/159 (43%)
Query: 264 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRN-IHIWTPREAGAWQVDQKPLVGHTNSV 322
P F+ GH ++ WS + LA+G CK I +W P G QV + L GH+ +
Sbjct: 148 PHFTCQGHRHWVLSISWSP-DGKKLASG-CKNGQILLWDP-STGK-QVG-RALAGHSKWI 202
Query: 323 EDLQWSP----GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTE 378
L W P E R +AS S D S+R+WDT C L HT V + W +
Sbjct: 203 TALSWEPLHANPECRYVASSSKDGSVRVWDT---TAGRCERIL-TGHTQSVTCLRWGG-D 257
Query: 379 PLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTV 417
L+ S D I VW R G T + H V T+
Sbjct: 258 GLLYSASQDRTIKVW---RAHDGVLCRTLQGHGHWVNTM 293
Score = 129 (50.5 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 42/140 (30%), Positives = 66/140 (47%)
Query: 315 LVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISW 374
L GH+ +V + +SP K LAS S D ++R WD ++T++ T H V ISW
Sbjct: 110 LEGHSEAVISVAFSPTGK-YLASGSGDTTVRFWD---LSTETPHFTC-QGHRHWVLSISW 164
Query: 375 NRTEPLIVSGGDDGCIHVWDLRRFKK-GSSVATFKHHTAPVTTVEWHPTESST----FAS 429
+ + SG +G I +WD K+ G ++A H+ +T + W P ++ AS
Sbjct: 165 SPDGKKLASGCKNGQILLWDPSTGKQVGRALAG---HSKWITALSWEPLHANPECRYVAS 221
Query: 430 GGADDQIALWDLAVERDSEI 449
D + +WD R I
Sbjct: 222 SSKDGSVRVWDTTAGRCERI 241
Score = 71 (30.1 bits), Expect = 8.6e-09, Sum P(2) = 8.6e-09
Identities = 19/62 (30%), Positives = 33/62 (53%)
Query: 704 LATGDCKRNIHIWTPREAGAWQVDQKPLV---GHTNSVEDLQWSPGEKRVLASCSVDRSN 760
L +G + +W+P E D+KPL GH + + +SP + R++AS S D+S
Sbjct: 344 LVSGSDDFTLFLWSPAE------DKKPLARMTGHQALINQVLFSP-DSRIIASASFDKSI 396
Query: 761 RI 762
++
Sbjct: 397 KL 398
Score = 61 (26.5 bits), Expect = 9.2e-08, Sum P(2) = 9.2e-08
Identities = 20/63 (31%), Positives = 29/63 (46%)
Query: 703 VLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRI 762
+L +G + +W + A D L GH + V + WSP +RV AS D+ RI
Sbjct: 428 LLVSGSSDSTLKVWDVK-AQKLAAD---LPGHADEVYAVDWSPDGQRV-ASGGKDKCLRI 482
Query: 763 GAR 765
R
Sbjct: 483 WRR 485
Score = 57 (25.1 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 16/60 (26%), Positives = 30/60 (50%)
Query: 703 VLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRI 762
++A+ ++I +W R G + L GH +V + WS + R+L S S D + ++
Sbjct: 386 IIASASFDKSIKLWDGR-TGKYLAS---LRGHVAAVYQIAWS-ADSRLLVSGSSDSTLKV 440
Score = 53 (23.7 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 654 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIW 684
GH E +A+DWS V A+G + + IW
Sbjct: 454 GHADEVYAVDWSPDGQRV-ASGGKDKCLRIW 483
Score = 44 (20.5 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 16/65 (24%), Positives = 29/65 (44%)
Query: 171 SFSGHLTEGFAMDW----SSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSA 226
+ +GH A+ W ++ E +A+ ++ +W AG + + L GHT S
Sbjct: 194 ALAGHSKWITALSWEPLHANPECRYVASSSKDGSVRVWDTT-AGRCE---RILTGHTQSV 249
Query: 227 EDLQW 231
L+W
Sbjct: 250 TCLRW 254
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 186 (70.5 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 55/175 (31%), Positives = 84/175 (48%)
Query: 267 SFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQ 326
+ SGH + WSS + +L +G + + +W E + K L GH+N V
Sbjct: 109 TISGHKLGISDVAWSS-DSRLLVSGSDDKTLKVW---ELSTGK-SLKTLKGHSNYVFCCN 163
Query: 327 WSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGD 386
++P + ++ S S D S+RIWD R T C+ TLP AH+ V+ + +NR LIVS
Sbjct: 164 FNP-QSNLIVSGSFDESVRIWDVR---TGKCLKTLP-AHSDPVSAVHFNRDGSLIVSSSY 218
Query: 387 DGCIHVWDLRRFKKGSSVATF-KHHTAPVTTVEWHPTESSTFASGGADDQIALWD 440
DG +WD G + T PV+ V++ P A+ D+ + LWD
Sbjct: 219 DGLCRIWDTA---SGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT-LDNTLKLWD 269
Score = 175 (66.7 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 51/178 (28%), Positives = 86/178 (48%)
Query: 266 FSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVD-QKPLVGHTNSVED 324
F+ +GH A+ +S LA+ + I IW GA+ +K + GH + D
Sbjct: 66 FTLAGHTKAVSAVKFSPNGEW-LASSSADKLIKIW-----GAYDGKFEKTISGHKLGISD 119
Query: 325 LQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSG 384
+ WS + R+L S S D ++++W+ ++T + TL H++ V ++N LIVSG
Sbjct: 120 VAWS-SDSRLLVSGSDDKTLKVWE---LSTGKSLKTL-KGHSNYVFCCNFNPQSNLIVSG 174
Query: 385 GDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442
D + +WD+R G + T H+ PV+ V ++ + S S D +WD A
Sbjct: 175 SFDESVRIWDVRT---GKCLKTLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTA 228
Score = 122 (48.0 bits), Expect = 0.00030, P = 0.00030
Identities = 52/231 (22%), Positives = 93/231 (40%)
Query: 170 FSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVD-QKPLGGHTNSAED 228
F+ +GH A+ +S LA+ + I IW GA+ +K + GH D
Sbjct: 66 FTLAGHTKAVSAVKFSPNGEW-LASSSADKLIKIW-----GAYDGKFEKTISGHKLGISD 119
Query: 229 LQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVL 288
+ WS L + D L GK L + GH F +++ + ++
Sbjct: 120 VAWSSDSRLLVSGSDDKTLKVWELSTGKS-------LKTLKGHSNYVFCCNFNP-QSNLI 171
Query: 289 ATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWD 348
+G ++ IW R K L H++ V + ++ + ++ S S D RIWD
Sbjct: 172 VSGSFDESVRIWDVRTGKCL----KTLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWD 226
Query: 349 TRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFK 399
T + C+ TL + V+ + ++ I++ D + +WD + K
Sbjct: 227 TA---SGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGK 274
>TAIR|locus:2202129 [details] [associations]
symbol:AT1G11160 "AT1G11160" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002684 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0080008 GO:GO:0008352 PANTHER:PTHR19845 IPI:IPI00528177
RefSeq:NP_172582.2 UniGene:At.43445 ProteinModelPortal:F4I7E1
SMR:F4I7E1 PRIDE:F4I7E1 EnsemblPlants:AT1G11160.1 GeneID:837657
KEGG:ath:AT1G11160 OMA:DETHATQ Uniprot:F4I7E1
Length = 1021
Score = 207 (77.9 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 60/184 (32%), Positives = 92/184 (50%)
Query: 259 GIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGH 318
G T P+ S GH + ++ ++S E VLA G I +W E+ + GH
Sbjct: 46 GKTTSPM-SLCGHTSPVDSVAFNSEEVLVLA-GASSGVIKLWDLEESKM----VRAFTGH 99
Query: 319 TNSVEDLQWSP-GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRT 377
++ +++ P GE LAS S D ++R+WDTR K C+ T HT ++ I ++
Sbjct: 100 RSNCSAVEFHPFGE--FLASGSSDTNLRVWDTR---KKGCIQTY-KGHTRGISTIEFSPD 153
Query: 378 EPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIA 437
+VSGG D + VWDL G + FK H P+ ++++HP E A+G AD +
Sbjct: 154 GRWVVSGGLDNVVKVWDLTA---GKLLHEFKCHEGPIRSLDFHPLEF-LLATGSADRTVK 209
Query: 438 LWDL 441
WDL
Sbjct: 210 FWDL 213
Score = 155 (59.6 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 44/182 (24%), Positives = 83/182 (45%)
Query: 267 SFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQ 326
+F+GH + A+++ LA+G N+ +W R+ G Q + GHT + ++
Sbjct: 95 AFTGHRSNCSAVEFHPFGE-FLASGSSDTNLRVWDTRKKGCIQTYK----GHTRGISTIE 149
Query: 327 WSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGD 386
+SP + R + S +D +++WD T +L H + + ++ E L+ +G
Sbjct: 150 FSP-DGRWVVSGGLDNVVKVWDL----TAGKLLHEFKCHEGPIRSLDFHPLEFLLATGSA 204
Query: 387 DGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIAL--WDLAVE 444
D + WDL F+ + T + V + +HP + F G DD + + W+ +
Sbjct: 205 DRTVKFWDLETFEL---IGTTRPEATGVRAIAFHPDGQTLFC--GLDDGLKVYSWEPVIC 259
Query: 445 RD 446
RD
Sbjct: 260 RD 261
Score = 148 (57.2 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 38/125 (30%), Positives = 59/125 (47%)
Query: 316 VGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWN 375
V H+ +V L R+L + D + +W + T S M HTS V+ +++N
Sbjct: 12 VAHSGNVNCLSIGKKTSRLLLTGGDDYKVNLWS--IGKTTSPMSLC--GHTSPVDSVAFN 67
Query: 376 RTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQ 435
E L+++G G I +WDL K V F H + + VE+HP ASG +D
Sbjct: 68 SEEVLVLAGASSGVIKLWDLEESKM---VRAFTGHRSNCSAVEFHPF-GEFLASGSSDTN 123
Query: 436 IALWD 440
+ +WD
Sbjct: 124 LRVWD 128
Score = 38 (18.4 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 11/36 (30%), Positives = 16/36 (44%)
Query: 649 LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIW 684
L F H ++D+ E +LATG R + W
Sbjct: 177 LHEFKCHEGPIRSLDFHPLE-FLLATGSADRTVKFW 211
Score = 37 (18.1 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 6/14 (42%), Positives = 8/14 (57%)
Query: 703 VLATGDCKRNIHIW 716
+LATG R + W
Sbjct: 198 LLATGSADRTVKFW 211
>RGD|1307285 [details] [associations]
symbol:Ciao1 "cytosolic iron-sulfur protein assembly 1"
species:10116 "Rattus norvegicus" [GO:0007059 "chromosome
segregation" evidence=IEA] [GO:0016226 "iron-sulfur cluster
assembly" evidence=ISO;ISS] [GO:0071817 "MMXD complex"
evidence=ISO;ISS] [GO:0097361 "CIA complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1307285 GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226
GO:GO:0071817 HSSP:P16649 HOGENOM:HOG000208901 OMA:SWKCVCT CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:BC088474 IPI:IPI00194647 RefSeq:NP_001008766.1
UniGene:Rn.108832 ProteinModelPortal:Q5M7T1 STRING:Q5M7T1
PRIDE:Q5M7T1 Ensembl:ENSRNOT00000017603 GeneID:29231 KEGG:rno:29231
UCSC:RGD:1307285 InParanoid:Q5M7T1 NextBio:608478
Genevestigator:Q5M7T1 Uniprot:Q5M7T1
Length = 339
Score = 166 (63.5 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 46/160 (28%), Positives = 72/160 (45%)
Query: 280 WSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCS 339
W+ T +LA+ R I IW E +W GH +V + WSP LAS S
Sbjct: 24 WNPTGT-LLASCGGDRKIRIWGT-EGDSWICKSVLSEGHQRTVRKVAWSPCGN-YLASAS 80
Query: 340 VDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFK 399
D + IW + + C+ TL H ++V ++W + L+ + D + VW++
Sbjct: 81 FDATTCIWKKNQDDFE-CVTTL-EGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEED 138
Query: 400 KGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALW 439
+ V+ HT V V WHP++ AS DD + L+
Sbjct: 139 EYECVSVLNSHTQDVKHVVWHPSQE-LLASASYDDTVKLY 177
Score = 160 (61.4 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 59/235 (25%), Positives = 104/235 (44%)
Query: 315 LVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISW 374
L GH N V+ + W+P +LA+CS D S+ +W+ + C+ L N+HT DV + W
Sbjct: 101 LEGHENEVKSVAWAPSGN-LLATCSRDKSVWVWEVDEEDEYECVSVL-NSHTQDVKHVVW 158
Query: 375 NRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADD 434
+ ++ L+ S D + ++ AT + H + V ++ + P+ AS D
Sbjct: 159 HPSQELLASASYDDTVKLYQ-EEGDDWVCCATLEGHESTVWSIAFDPS-GQRLASCSDDR 216
Query: 435 QIALWDLAVERDSEIEQREAELKDLPSQLLFIHLG---QKEIKELHWHPQLPGTIISTA- 490
+ +W + + EQ A PS L + I ++ W QL G + +
Sbjct: 217 TVRIWRQYLPGN---EQGVACSGSDPSWKCVCTLSGFHTRTIYDVAWC-QLTGALATACG 272
Query: 491 NSGFNIFRTI--SDLPSQLLF---IHLGQKEIKELH---WHPQLPGTIISTANSG 537
+ +F SD P Q F HL Q ++++ W+P+ G + S ++ G
Sbjct: 273 DDAIRVFEEDPGSD-PQQPTFSLTAHLRQAHSQDVNCVAWNPKEAGLLASCSDDG 326
Score = 115 (45.5 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 37/147 (25%), Positives = 61/147 (41%)
Query: 334 VLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVW 393
+LASC D IRIW T ++ C L H V ++W+ + S D +W
Sbjct: 30 LLASCGGDRKIRIWGTEG-DSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIW 88
Query: 394 DLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQRE 453
+ V T + H V +V W P+ + A+ D + +W+ V+ + E E
Sbjct: 89 KKNQ-DDFECVTTLEGHENEVKSVAWAPS-GNLLATCSRDKSVWVWE--VDEEDEYEC-- 142
Query: 454 AELKDLPSQLLFIHLGQKEIKELHWHP 480
+L H +++K + WHP
Sbjct: 143 -------VSVLNSHT--QDVKHVVWHP 160
Score = 63 (27.2 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 20/60 (33%), Positives = 31/60 (51%)
Query: 703 VLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRI 762
+LA+ + ++ E W V L GH ++V + + P +R LASCS DR+ RI
Sbjct: 164 LLASASYDDTVKLYQ-EEGDDW-VCCATLEGHESTVWSIAFDPSGQR-LASCSDDRTVRI 220
Score = 61 (26.5 bits), Expect = 4.3e-11, Sum P(2) = 4.3e-11
Identities = 23/77 (29%), Positives = 33/77 (42%)
Query: 616 W-DLKTALQTV--DDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMD-----WSST 667
W L AL T DD ++ E + G P PT FS + HL + + D W+
Sbjct: 260 WCQLTGALATACGDDAIRVFEEDP--GSDPQQPT---FSLTAHLRQAHSQDVNCVAWNPK 314
Query: 668 EPGVLATGDCKRNIHIW 684
E G+LA+ + W
Sbjct: 315 EAGLLASCSDDGEVAFW 331
Score = 58 (25.5 bits), Expect = 8.8e-11, Sum P(2) = 8.8e-11
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 734 HTNSVEDLQWSPGEKRVLASCSVD 757
H+ V + W+P E +LASCS D
Sbjct: 302 HSQDVNCVAWNPKEAGLLASCSDD 325
Score = 39 (18.8 bits), Expect = 8.1e-09, Sum P(2) = 8.1e-09
Identities = 15/50 (30%), Positives = 19/50 (38%)
Query: 642 PGI-PTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAG 690
PG P P FS + HL + + D N W P+EAG
Sbjct: 283 PGSDPQQPTFSLTAHLRQAHSQDV---------------NCVAWNPKEAG 317
>UNIPROTKB|F1PUU2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001826
"inner cell mass cell differentiation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007219 GeneTree:ENSGT00690000102167
PRINTS:PR00319 GO:GO:0001826 EMBL:AAEX03006625
Ensembl:ENSCAFT00000029052 Uniprot:F1PUU2
Length = 436
Score = 192 (72.6 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 51/158 (32%), Positives = 77/158 (48%)
Query: 285 PGVLATGDCKRNIHIWTPREAGAWQVDQKPLV---GHTNSVEDLQWSPGEKRVLASCSVD 341
P L +G + +W+P E D+KPL GH + + +SP + R++AS S D
Sbjct: 292 PERLVSGSDDFTLFMWSPAE------DKKPLARMTGHQALINQVLFSP-DSRIIASASFD 344
Query: 342 LSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKG 401
SI++WD R T + +L H + V I+W+ L+VSG D + VWD++ K
Sbjct: 345 KSIKLWDGR---TGKYLASL-RGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLA 400
Query: 402 SSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALW 439
A H V V+W P + ASGG D + +W
Sbjct: 401 ---ADLPGHADEVYAVDWSP-DGQRVASGGKDKCLRIW 434
Score = 145 (56.1 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 52/159 (32%), Positives = 69/159 (43%)
Query: 264 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRN-IHIWTPREAGAWQVDQKPLVGHTNSV 322
P F+ GH ++ WS + LA+G CK I +W P G QV + L GH+ +
Sbjct: 99 PHFTCQGHRHWVLSISWSP-DGKTLASG-CKNGQILLWDP-STGK-QVG-RVLAGHSKWI 153
Query: 323 EDLQWSP----GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTE 378
L W P E R +AS S D S+R+WDT C L HT V + W +
Sbjct: 154 TGLSWEPLHANPECRYMASSSKDGSVRVWDT---TAGRCERIL-TGHTQSVTCLRWGG-D 208
Query: 379 PLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTV 417
L+ S D I VW R G T + H V T+
Sbjct: 209 GLLYSASQDRTIKVW---RAHDGVLCRTLQGHGHWVNTM 244
Score = 128 (50.1 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 41/139 (29%), Positives = 63/139 (45%)
Query: 315 LVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISW 374
L GH+ +V + +SP K LAS S D ++R WD ++T++ T H V ISW
Sbjct: 61 LEGHSEAVISVAFSPTGK-YLASGSGDTTVRFWD---LSTETPHFTC-QGHRHWVLSISW 115
Query: 375 NRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESST----FASG 430
+ + SG +G I +WD K+ V H+ +T + W P ++ AS
Sbjct: 116 SPDGKTLASGCKNGQILLWDPSTGKQVGRVLA--GHSKWITGLSWEPLHANPECRYMASS 173
Query: 431 GADDQIALWDLAVERDSEI 449
D + +WD R I
Sbjct: 174 SKDGSVRVWDTTAGRCERI 192
Score = 95 (38.5 bits), Expect = 0.00095, Sum P(2) = 0.00095
Identities = 27/91 (29%), Positives = 41/91 (45%)
Query: 350 RVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKH 409
RV C +L H+ V ++++ T + SG D + WDL + T +
Sbjct: 50 RVRAVTRCTSSL-EGHSEAVISVAFSPTGKYLASGSGDTTVRFWDL---STETPHFTCQG 105
Query: 410 HTAPVTTVEWHPTESSTFASGGADDQIALWD 440
H V ++ W P + T ASG + QI LWD
Sbjct: 106 HRHWVLSISWSP-DGKTLASGCKNGQILLWD 135
Score = 70 (29.7 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 19/62 (30%), Positives = 33/62 (53%)
Query: 704 LATGDCKRNIHIWTPREAGAWQVDQKPLV---GHTNSVEDLQWSPGEKRVLASCSVDRSN 760
L +G + +W+P E D+KPL GH + + +SP + R++AS S D+S
Sbjct: 295 LVSGSDDFTLFMWSPAE------DKKPLARMTGHQALINQVLFSP-DSRIIASASFDKSI 347
Query: 761 RI 762
++
Sbjct: 348 KL 349
Score = 61 (26.5 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 20/63 (31%), Positives = 29/63 (46%)
Query: 703 VLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRI 762
+L +G + +W + A D L GH + V + WSP +RV AS D+ RI
Sbjct: 379 LLVSGSSDSTLKVWDVK-AQKLAAD---LPGHADEVYAVDWSPDGQRV-ASGGKDKCLRI 433
Query: 763 GAR 765
R
Sbjct: 434 WRR 436
Score = 57 (25.1 bits), Expect = 7.8e-08, Sum P(2) = 7.8e-08
Identities = 16/60 (26%), Positives = 30/60 (50%)
Query: 703 VLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRI 762
++A+ ++I +W R G + L GH +V + WS + R+L S S D + ++
Sbjct: 337 IIASASFDKSIKLWDGR-TGKYLAS---LRGHVAAVYQIAWS-ADSRLLVSGSSDSTLKV 391
Score = 53 (23.7 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 654 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIW 684
GH E +A+DWS V A+G + + IW
Sbjct: 405 GHADEVYAVDWSPDGQRV-ASGGKDKCLRIW 434
Score = 40 (19.1 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 15/63 (23%), Positives = 27/63 (42%)
Query: 173 SGHLTEGFAMDW----SSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAED 228
+GH + W ++ E +A+ ++ +W AG + + L GHT S
Sbjct: 147 AGHSKWITGLSWEPLHANPECRYMASSSKDGSVRVWDTT-AGRCE---RILTGHTQSVTC 202
Query: 229 LQW 231
L+W
Sbjct: 203 LRW 205
>SGD|S000006382 [details] [associations]
symbol:PRP4 "Splicing factor" species:4932 "Saccharomyces
cerevisiae" [GO:0003674 "molecular_function" evidence=ND]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=IDA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IPI] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 SGD:S000006382 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006949 GO:GO:0000398
InterPro:IPR027106 PANTHER:PTHR19846 EMBL:U25842 GO:GO:0046540
EMBL:M26597 HOGENOM:HOG000157615 KO:K12662
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:M28518 PIR:A32569
RefSeq:NP_015504.1 ProteinModelPortal:P20053 SMR:P20053
DIP:DIP-2607N IntAct:P20053 MINT:MINT-423902 STRING:P20053
PaxDb:P20053 EnsemblFungi:YPR178W GeneID:856307 KEGG:sce:YPR178W
CYGD:YPR178w OrthoDB:EOG4V1B90 NextBio:981676 Genevestigator:P20053
GermOnline:YPR178W Uniprot:P20053
Length = 465
Score = 187 (70.9 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 48/151 (31%), Positives = 76/151 (50%)
Query: 315 LVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISW 374
LVGH + D+++ P K + S S D++ R+WD +T +L L H V +S+
Sbjct: 261 LVGHERRISDVKYHPSGK-FIGSASHDMTWRLWDA---STHQELL-LQEGHDKGVFSLSF 315
Query: 375 NRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADD 434
L+ SGG D +WD+R GS V T H+ P+ TV W P A+GG D
Sbjct: 316 QCDGSLVCSGGMDSLSMLWDIR---SGSKVMTLAGHSKPIYTVAWSPNGYQV-ATGGGDG 371
Query: 435 QIALWDLAVERDSEIEQREAELKDLPSQLLF 465
I +WD+ + ++ Q A +++ +Q+ F
Sbjct: 372 IINVWDIRKRDEGQLNQILAH-RNIVTQVRF 401
>GENEDB_PFALCIPARUM|PFA0520c [details] [associations]
symbol:PFA0520c "chromatin assembly factor 1
protein WD40 domain, putative" species:5833 "Plasmodium falciparum"
[GO:0051082 "unfolded protein binding" evidence=ISS] [GO:0042393
"histone binding" evidence=ISS] [GO:0006334 "nucleosome assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0051082
GO:GO:0042393 GO:GO:0006334 GO:GO:0005678 KO:K10752
InterPro:IPR022052 Pfam:PF12265 EMBL:AL844501 OMA:VLYDLVI
RefSeq:XP_001351036.1 ProteinModelPortal:Q8I238 PRIDE:Q8I238
EnsemblProtists:PFA0520c:mRNA GeneID:813241 KEGG:pfa:PFA_0520c
HOGENOM:HOG000283790 ProtClustDB:CLSZ2433094 Uniprot:Q8I238
Length = 446
Score = 188 (71.2 bits), Expect = 3.6e-11, Sum P(3) = 3.6e-11
Identities = 70/278 (25%), Positives = 126/278 (45%)
Query: 222 HTNSAEDLQWSDLK----TALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFA 277
HT +++ L+ + VD L + NK + + P SF G+ ++GF
Sbjct: 151 HTGEVNRIKFVPLEKKNFVVTKAVDGNVHLFDINKHKIETVDDKMNPEVSFVGNQSDGFG 210
Query: 278 MDWSSTEPGVLA-TGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSP-GEKRVL 335
+D+ + +L D N++ + Q K V + + V D+ SP + ++
Sbjct: 211 LDFQPIKKYILTCANDGLINVYDYNTLNTKTVQPFYK--VQYKSPVNDI--SPTNDPNLI 266
Query: 336 ASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDL 395
+C+ + I I+D R+ + + TL VN ++ N L SG D+G I VWDL
Sbjct: 267 LACADNGYILIFDFRIKSNEPAQQTL--GQQVPVNTVALNTFTGLFASGSDNGKIKVWDL 324
Query: 396 RRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAE 455
++F + + H + + + P ++S AS + I ++DL + E E +
Sbjct: 325 KKFHEPQHI--INAHKEAIIRLNFSPNDASILASASNNRFINVYDL--NKIGE-ELDAID 379
Query: 456 LKDLPSQLLFIHLGQKE-IKELHW--HPQLPGTIISTA 490
L D PS+L+F H G + + + +W H +L I ST+
Sbjct: 380 LSDGPSELIFSHGGHTQPVTDFNWNHHKKLKMFIGSTS 417
Score = 153 (58.9 bits), Expect = 2.9e-07, Sum P(3) = 2.9e-07
Identities = 69/259 (26%), Positives = 116/259 (44%)
Query: 296 NIHIWTPREAGAWQVDQK--PLVGHTNSVED---LQWSPGEKRVLASCSVDLSIRIWDTR 350
N+H++ + VD K P V + D L + P +K +L +C+ D I ++D
Sbjct: 177 NVHLFDINKHKIETVDDKMNPEVSFVGNQSDGFGLDFQPIKKYIL-TCANDGLINVYDYN 235
Query: 351 VINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHH 410
+NTK+ + S VN IS LI++ D+G I ++D R K
Sbjct: 236 TLNTKTVQPFYKVQYKSPVNDISPTNDPNLILACADNGYILIFDFR-IKSNEPAQQTLGQ 294
Query: 411 TAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQ 470
PV TV + T + FASG + +I +WDL ++ E P ++ H +
Sbjct: 295 QVPVNTVALN-TFTGLFASGSDNGKIKVWDL--KKFHE-----------PQHIINAH--K 338
Query: 471 KEIKELHWHPQLPGTIISTANSGF-NIFRT-----------ISDLPSQLLFIHLGQKE-I 517
+ I L++ P + S +N+ F N++ +SD PS+L+F H G + +
Sbjct: 339 EAIIRLNFSPNDASILASASNNRFINVYDLNKIGEELDAIDLSDGPSELIFSHGGHTQPV 398
Query: 518 KELHW--HPQLPGTIISTA 534
+ +W H +L I ST+
Sbjct: 399 TDFNWNHHKKLKMFIGSTS 417
Score = 43 (20.2 bits), Expect = 3.6e-11, Sum P(3) = 3.6e-11
Identities = 9/30 (30%), Positives = 13/30 (43%)
Query: 733 GHTNSVEDLQWSPGEKRVLASCSVDRSNRI 762
GHT V D W+ +K + S N +
Sbjct: 393 GHTQPVTDFNWNHHKKLKMFIGSTSEDNTL 422
Score = 40 (19.1 bits), Expect = 3.6e-11, Sum P(3) = 3.6e-11
Identities = 6/16 (37%), Positives = 12/16 (75%)
Query: 13 EASNDIVDNDSDEDME 28
+ S++ +D D +ED+E
Sbjct: 29 DVSHEKIDEDEEEDVE 44
>UNIPROTKB|Q8I238 [details] [associations]
symbol:PFA_0520c "Chromatin assembly factor 1 protein WD40
domain, putative" species:36329 "Plasmodium falciparum 3D7"
[GO:0006334 "nucleosome assembly" evidence=ISS] [GO:0042393
"histone binding" evidence=ISS] [GO:0051082 "unfolded protein
binding" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0051082
GO:GO:0042393 GO:GO:0006334 GO:GO:0005678 KO:K10752
InterPro:IPR022052 Pfam:PF12265 EMBL:AL844501 OMA:VLYDLVI
RefSeq:XP_001351036.1 ProteinModelPortal:Q8I238 PRIDE:Q8I238
EnsemblProtists:PFA0520c:mRNA GeneID:813241 KEGG:pfa:PFA_0520c
HOGENOM:HOG000283790 ProtClustDB:CLSZ2433094 Uniprot:Q8I238
Length = 446
Score = 188 (71.2 bits), Expect = 3.6e-11, Sum P(3) = 3.6e-11
Identities = 70/278 (25%), Positives = 126/278 (45%)
Query: 222 HTNSAEDLQWSDLK----TALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFA 277
HT +++ L+ + VD L + NK + + P SF G+ ++GF
Sbjct: 151 HTGEVNRIKFVPLEKKNFVVTKAVDGNVHLFDINKHKIETVDDKMNPEVSFVGNQSDGFG 210
Query: 278 MDWSSTEPGVLA-TGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSP-GEKRVL 335
+D+ + +L D N++ + Q K V + + V D+ SP + ++
Sbjct: 211 LDFQPIKKYILTCANDGLINVYDYNTLNTKTVQPFYK--VQYKSPVNDI--SPTNDPNLI 266
Query: 336 ASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDL 395
+C+ + I I+D R+ + + TL VN ++ N L SG D+G I VWDL
Sbjct: 267 LACADNGYILIFDFRIKSNEPAQQTL--GQQVPVNTVALNTFTGLFASGSDNGKIKVWDL 324
Query: 396 RRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAE 455
++F + + H + + + P ++S AS + I ++DL + E E +
Sbjct: 325 KKFHEPQHI--INAHKEAIIRLNFSPNDASILASASNNRFINVYDL--NKIGE-ELDAID 379
Query: 456 LKDLPSQLLFIHLGQKE-IKELHW--HPQLPGTIISTA 490
L D PS+L+F H G + + + +W H +L I ST+
Sbjct: 380 LSDGPSELIFSHGGHTQPVTDFNWNHHKKLKMFIGSTS 417
Score = 153 (58.9 bits), Expect = 2.9e-07, Sum P(3) = 2.9e-07
Identities = 69/259 (26%), Positives = 116/259 (44%)
Query: 296 NIHIWTPREAGAWQVDQK--PLVGHTNSVED---LQWSPGEKRVLASCSVDLSIRIWDTR 350
N+H++ + VD K P V + D L + P +K +L +C+ D I ++D
Sbjct: 177 NVHLFDINKHKIETVDDKMNPEVSFVGNQSDGFGLDFQPIKKYIL-TCANDGLINVYDYN 235
Query: 351 VINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHH 410
+NTK+ + S VN IS LI++ D+G I ++D R K
Sbjct: 236 TLNTKTVQPFYKVQYKSPVNDISPTNDPNLILACADNGYILIFDFR-IKSNEPAQQTLGQ 294
Query: 411 TAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQ 470
PV TV + T + FASG + +I +WDL ++ E P ++ H +
Sbjct: 295 QVPVNTVALN-TFTGLFASGSDNGKIKVWDL--KKFHE-----------PQHIINAH--K 338
Query: 471 KEIKELHWHPQLPGTIISTANSGF-NIFRT-----------ISDLPSQLLFIHLGQKE-I 517
+ I L++ P + S +N+ F N++ +SD PS+L+F H G + +
Sbjct: 339 EAIIRLNFSPNDASILASASNNRFINVYDLNKIGEELDAIDLSDGPSELIFSHGGHTQPV 398
Query: 518 KELHW--HPQLPGTIISTA 534
+ +W H +L I ST+
Sbjct: 399 TDFNWNHHKKLKMFIGSTS 417
Score = 43 (20.2 bits), Expect = 3.6e-11, Sum P(3) = 3.6e-11
Identities = 9/30 (30%), Positives = 13/30 (43%)
Query: 733 GHTNSVEDLQWSPGEKRVLASCSVDRSNRI 762
GHT V D W+ +K + S N +
Sbjct: 393 GHTQPVTDFNWNHHKKLKMFIGSTSEDNTL 422
Score = 40 (19.1 bits), Expect = 3.6e-11, Sum P(3) = 3.6e-11
Identities = 6/16 (37%), Positives = 12/16 (75%)
Query: 13 EASNDIVDNDSDEDME 28
+ S++ +D D +ED+E
Sbjct: 29 DVSHEKIDEDEEEDVE 44
>UNIPROTKB|A4RD35 [details] [associations]
symbol:SEC31 "Protein transport protein SEC31"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0012507 GO:GO:0016192 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005789 EMBL:CM001235
GO:GO:0015031 eggNOG:COG2319 KO:K14005 InterPro:IPR009917
Pfam:PF07304 OrthoDB:EOG4RR9RS RefSeq:XP_003717826.1
ProteinModelPortal:A4RD35 STRING:A4RD35 EnsemblFungi:MGG_01108T0
GeneID:2674815 KEGG:mgr:MGG_01108 Uniprot:A4RD35
Length = 1269
Score = 196 (74.1 bits), Expect = 3.6e-11, Sum P(2) = 3.6e-11
Identities = 81/297 (27%), Positives = 134/297 (45%)
Query: 206 PREAG-AWQVDQK-PL--GGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIP 261
PR A AW D P+ G A D +SD +T L+ D +L + +G G+
Sbjct: 8 PRTAAFAWSPDTSAPIVVTGTRAGAVDADFSD-ETKLELWD--LKLDD------EGQGLE 58
Query: 262 TPPLFSFSGHLTEGFAMDW---SSTEP-GVLATGDCKRNIHIWTPRE--AGAWQVDQKPL 315
P+ S S + F + W + P G++A ++ +W + +GA
Sbjct: 59 LQPIASISAD-SRFFDIAWGPPNEDHPRGIIAGALENGSLDLWDAEKLLSGASDAHMSRT 117
Query: 316 VGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWN 375
HT +++ LQ++P + ++LA+ + I+D I+ + T A + D+ ++WN
Sbjct: 118 TKHTGAIKSLQFNPLKPQILATAGTKGELFIYDVNDISNPFRLGTAA-ARSDDLECVAWN 176
Query: 376 RTEP-LIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADD 434
R P ++ +GG G + VWDL+ +K S T + V+ + W P S+ + DD
Sbjct: 177 RKVPHILATGGSGGFVTVWDLKT-RKAS--LTLNNSRKAVSAIAWDPNNSTKLLTATPDD 233
Query: 435 Q---IALWDL----AVERDSE-IEQREAELK--DLPSQLLFIHLGQKEIKELHWHPQ 481
I LWDL A ER + EQ + S LL I G K+ + + W+PQ
Sbjct: 234 TMPVIFLWDLRNSNAPERTLQGHEQGVLSVSWCQQDSDLL-ISCG-KDNRTIVWNPQ 288
Score = 49 (22.3 bits), Expect = 3.6e-11, Sum P(2) = 3.6e-11
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 745 PGEKRVLASCSVDRSNRIGARRDMLYCFFVS--LVHCIFVWL 784
P E L DR G+R+D +CF V L + +W+
Sbjct: 646 PEEFPDLCEALGDRLFETGSRQDASFCFLVGSKLEKVVGIWI 687
>UNIPROTKB|Q0VC24 [details] [associations]
symbol:WDR12 "Ribosome biogenesis protein WDR12"
species:9913 "Bos taurus" [GO:0000463 "maturation of LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0030687 "preribosome, large subunit precursor"
evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS] [GO:0008283
"cell proliferation" evidence=ISS] [GO:0000466 "maturation of 5.8S
rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS]
[GO:0005730 "nucleolus" evidence=ISS] [GO:0007219 "Notch signaling
pathway" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 GO:GO:0030687
GO:GO:0070545 GO:GO:0000463 GO:GO:0000466 InterPro:IPR012972
Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464 OMA:LQTRFFT
HAMAP:MF_03029 EMBL:BT029892 EMBL:BC120386 EMBL:BC142121
IPI:IPI00725024 RefSeq:NP_001069375.1 UniGene:Bt.42368
ProteinModelPortal:Q0VC24 STRING:Q0VC24 Ensembl:ENSBTAT00000020499
GeneID:528209 KEGG:bta:528209 CTD:55759
GeneTree:ENSGT00640000091456 HOVERGEN:HBG054155 InParanoid:Q0VC24
OrthoDB:EOG4V6ZGM NextBio:20874770 Uniprot:Q0VC24
Length = 423
Score = 186 (70.5 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 62/208 (29%), Positives = 99/208 (47%)
Query: 231 WSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLAT 290
WS + T + + K++ + G+ P+ + SGH ++ WS E A+
Sbjct: 216 WSTVPTDEEDEMEESTNRPRKKQKTEQLGLTRTPIVTLSGHKEAISSVLWSDAEEICSAS 275
Query: 291 GDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVED-LQWSPGEKRVLASCSVDLSIRIWDT 349
D I +W E+G+ + L G N V + + +SP KR LAS S D IR+WD
Sbjct: 276 WD--HTIKVWDV-ESGSLK---STLTG--NKVFNCISYSPLCKR-LASGSTDRHIRLWDP 326
Query: 350 RVINTKSCMLTLPNAHTSDVNVISWNRT-EPLIVSGGDDGCIHVWDLRRFKKGSSVATFK 408
R + L+L +HT V + W+ T E ++SG D + +WD R K + +
Sbjct: 327 RTKDGSLVSLSL-TSHTGWVTSVKWSPTHEQQLISGSLDNMVKLWDTRSCK--APLYDLA 383
Query: 409 HHTAPVTTVEWHPTESSTFASGGADDQI 436
H V +V+W T+S SGGAD+++
Sbjct: 384 AHEDKVLSVDW--TDSGLLLSGGADNKL 409
Score = 181 (68.8 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 78/294 (26%), Positives = 121/294 (41%)
Query: 180 FAMDWSSTEPGV---LATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQW--SDL 234
F DW S G + TG + IW+ + GHT+ +D+ W D
Sbjct: 99 FHDDWISAIEGTEEWILTGSYDKTSRIWSLEGKSIMTIV-----GHTDVVKDVAWVKKDS 153
Query: 235 KTAL---QTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHL--TEGFAMDWSSTEPGVLA 289
+ L ++D L E N +R K L GH + A+D + T+
Sbjct: 154 LSCLLLSASMDQTILLWEWNVERNK-----VKALHCCRGHAGSVDSIAVDSTGTK---FC 205
Query: 290 TGDCKRNIHIWT----------------PREAGAWQ---VDQKPLV---GHTNSVEDLQW 327
+G + + IW+ PR+ + + + P+V GH ++ + W
Sbjct: 206 SGSWDKMLKIWSTVPTDEEDEMEESTNRPRKKQKTEQLGLTRTPIVTLSGHKEAISSVLW 265
Query: 328 SPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDD 387
S E+ + S S D +I++WD + KS TL N IS++ + SG D
Sbjct: 266 SDAEE--ICSASWDHTIKVWDVESGSLKS---TLTGNKV--FNCISYSPLCKRLASGSTD 318
Query: 388 GCIHVWDLRRFKKGSSVA-TFKHHTAPVTTVEWHPTESSTFASGGADDQIALWD 440
I +WD R K GS V+ + HT VT+V+W PT SG D+ + LWD
Sbjct: 319 RHIRLWDPRT-KDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNMVKLWD 371
Score = 141 (54.7 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 35/104 (33%), Positives = 55/104 (52%)
Query: 288 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIW 347
LA+G R+I +W PR V L HT V ++WSP ++ L S S+D +++W
Sbjct: 312 LASGSTDRHIRLWDPRTKDGSLVSLS-LTSHTGWVTSVKWSPTHEQQLISGSLDNMVKLW 370
Query: 348 DTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIH 391
DTR + K+ + L AH V + W + L++SGG D ++
Sbjct: 371 DTR--SCKAPLYDLA-AHEDKVLSVDWTDSG-LLLSGGADNKLY 410
Score = 128 (50.1 bits), Expect = 5.3e-09, Sum P(2) = 5.3e-09
Identities = 48/184 (26%), Positives = 77/184 (41%)
Query: 586 HRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGP--G 643
H G ++ + G+ +G W ++ K IW D+ + +K+ K G
Sbjct: 188 HAGSVDSIAVDSTGTKFCSGSWDKMLK--IWST-VPTDEEDEMEESTNRPRKKQKTEQLG 244
Query: 644 IPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSVYLYTNR-FG 702
+ P+ + SGH ++ WS E A+ D I +W E+G+ L N+ F
Sbjct: 245 LTRTPIVTLSGHKEAISSVLWSDAEEICSASWD--HTIKVWDV-ESGSLKSTLTGNKVFN 301
Query: 703 V---------LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLAS 753
LA+G R+I +W PR V L HT V ++WSP ++ L S
Sbjct: 302 CISYSPLCKRLASGSTDRHIRLWDPRTKDGSLVSLS-LTSHTGWVTSVKWSPTHEQQLIS 360
Query: 754 CSVD 757
S+D
Sbjct: 361 GSLD 364
Score = 86 (35.3 bits), Expect = 5.3e-09, Sum P(2) = 5.3e-09
Identities = 24/72 (33%), Positives = 33/72 (45%)
Query: 377 TEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESST--FASGGADD 434
TE I++G D +W L +G S+ T HT V V W +S + S D
Sbjct: 110 TEEWILTGSYDKTSRIWSL----EGKSIMTIVGHTDVVKDVAWVKKDSLSCLLLSASMDQ 165
Query: 435 QIALWDLAVERD 446
I LW+ VER+
Sbjct: 166 TILLWEWNVERN 177
Score = 50 (22.7 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 9/35 (25%), Positives = 19/35 (54%)
Query: 648 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIH 682
PL+ + H + ++DW T+ G+L +G ++
Sbjct: 378 PLYDLAAHEDKVLSVDW--TDSGLLLSGGADNKLY 410
>TAIR|locus:2176897 [details] [associations]
symbol:AT5G52820 "AT5G52820" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0051604 "protein
maturation" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AB009055 HSSP:P16649
InterPro:IPR011044 SUPFAM:SSF50969 PRINTS:PR00319 GO:GO:0080008
EMBL:AK227330 EMBL:BT004562 IPI:IPI00528132 RefSeq:NP_200094.1
UniGene:At.29592 ProteinModelPortal:Q9FLX9 SMR:Q9FLX9 STRING:Q9FLX9
PaxDb:Q9FLX9 PRIDE:Q9FLX9 EnsemblPlants:AT5G52820.1 GeneID:835359
KEGG:ath:AT5G52820 GeneFarm:3344 TAIR:At5g52820
HOGENOM:HOG000091641 InParanoid:Q9FLX9 KO:K14855 OMA:HFTCKGH
PhylomeDB:Q9FLX9 ProtClustDB:CLSN2686131 Genevestigator:Q9FLX9
InterPro:IPR012972 Pfam:PF08154 Uniprot:Q9FLX9
Length = 473
Score = 162 (62.1 bits), Expect = 4.0e-11, Sum P(2) = 4.0e-11
Identities = 43/155 (27%), Positives = 69/155 (44%)
Query: 285 PGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSI 344
P L +G + +W P + + +K L GH V + +SP K + AS S D S+
Sbjct: 329 PERLVSGSDDFTMFLWEPSVS---KQPKKRLTGHQQLVNHVYFSPDGKWI-ASASFDKSV 384
Query: 345 RIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSV 404
R+W+ +T+ H V +SW+ L++SG D + +W++R K +
Sbjct: 385 RLWN----GITGQFVTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQDL 440
Query: 405 ATFKHHTAPVTTVEWHPTESSTFASGGADDQIALW 439
H V V+W P + SGG D + LW
Sbjct: 441 PG---HADEVFAVDWSP-DGEKVVSGGKDRVLKLW 471
Score = 138 (53.6 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 52/223 (23%), Positives = 87/223 (39%)
Query: 264 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVE 323
PLF+ GH + WS + L +G I W P++ +++ PL GH +
Sbjct: 143 PLFTCKGHKNWVLTVAWSP-DGKHLVSGSKSGEICCWNPKKG---ELEGSPLTGHKKWIT 198
Query: 324 DLQWSP----GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEP 379
+ W P R + S D RIWD I K ++ L + HT V + W +
Sbjct: 199 GISWEPVHLSSPCRRFVTSSKDGDARIWD---ITLKKSIICL-SGHTLAVTCVKWGG-DG 253
Query: 380 LIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALW 439
+I +G D I +W+ + G + K H + ++ TE +G D +
Sbjct: 254 IIYTGSQDCTIKMWETTQ---GKLIRELKGHGHWINSLALS-TEY-VLRTGAFDHTGRQY 308
Query: 440 DLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQL 482
E+ +E+ D P +L+ G + W P +
Sbjct: 309 PPNEEKQKALERYNKTKGDSPERLVS---GSDDFTMFLWEPSV 348
Score = 133 (51.9 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 36/135 (26%), Positives = 66/135 (48%)
Query: 315 LVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISW 374
+ GH +V + +SP K+ LAS S D ++R+WD + T++ + T H + V ++W
Sbjct: 105 IAGHAEAVLCVSFSPDGKQ-LASGSGDTTVRLWD---LYTETPLFTC-KGHKNWVLTVAW 159
Query: 375 NRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESST----FASG 430
+ +VSG G I W+ ++ + S T H +T + W P S+ F +
Sbjct: 160 SPDGKHLVSGSKSGEICCWNPKKGELEGSPLT--GHKKWITGISWEPVHLSSPCRRFVTS 217
Query: 431 GADDQIALWDLAVER 445
D +WD+ +++
Sbjct: 218 SKDGDARIWDITLKK 232
Score = 97 (39.2 bits), Expect = 2.2e-05, Sum P(3) = 2.2e-05
Identities = 28/111 (25%), Positives = 46/111 (41%)
Query: 335 LASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWD 394
L S S D ++ +W+ V LT H VN + ++ I S D + +W+
Sbjct: 332 LVSGSDDFTMFLWEPSVSKQPKKRLT---GHQQLVNHVYFSPDGKWIASASFDKSVRLWN 388
Query: 395 LRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVER 445
G V F+ H PV V W +S SG D + +W++ ++
Sbjct: 389 ---GITGQFVTVFRGHVGPVYQVSWS-ADSRLLLSGSKDSTLKIWEIRTKK 435
Score = 72 (30.4 bits), Expect = 4.0e-11, Sum P(2) = 4.0e-11
Identities = 30/136 (22%), Positives = 49/136 (36%)
Query: 168 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAE 227
PLF+ GH + WS + L +G I W P++ +++ PL GH
Sbjct: 143 PLFTCKGHKNWVLTVAWSP-DGKHLVSGSKSGEICCWNPKKG---ELEGSPLTGHKKWIT 198
Query: 228 DLQWSDLKTALQTVDDPFQLAEHNKKRGKGP--GIPTPP-LFSFSGHLTEGFAMDWSSTE 284
+ W + + P + + K G I + SGH + W
Sbjct: 199 GISWEPVH-----LSSPCRRFVTSSKDGDARIWDITLKKSIICLSGHTLAVTCVKWGGD- 252
Query: 285 PGVLATGDCKRNIHIW 300
G++ TG I +W
Sbjct: 253 -GIIYTGSQDCTIKMW 267
Score = 67 (28.6 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 32/113 (28%), Positives = 47/113 (41%)
Query: 654 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSVYLYTNRFGV----LATGDC 709
GH A+ STE VL TG + P E ++ Y G L +G
Sbjct: 282 GHWINSLAL---STEY-VLRTGAFDHTGRQYPPNEEKQKALERYNKTKGDSPERLVSGSD 337
Query: 710 KRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRI 762
+ +W P + + +K L GH V + +SP K + AS S D+S R+
Sbjct: 338 DFTMFLWEPSVS---KQPKKRLTGHQQLVNHVYFSPDGKWI-ASASFDKSVRL 386
Score = 54 (24.1 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 654 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIW 684
GH E FA+DWS V++ G R + +W
Sbjct: 442 GHADEVFAVDWSPDGEKVVSGGK-DRVLKLW 471
Score = 51 (23.0 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 17/49 (34%), Positives = 22/49 (44%)
Query: 703 VLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSP-GEKRV 750
+L +G + IW R Q L GH + V + WSP GEK V
Sbjct: 416 LLLSGSKDSTLKIWEIRTKKLKQ----DLPGHADEVFAVDWSPDGEKVV 460
Score = 45 (20.9 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 733 GHTNSVEDLQWSPGEKRVLASCSVDRSNRI 762
GH V + WS + R+L S S D + +I
Sbjct: 400 GHVGPVYQVSWS-ADSRLLLSGSKDSTLKI 428
>TAIR|locus:2029939 [details] [associations]
symbol:PEX7 "AT1G29260" species:3702 "Arabidopsis
thaliana" [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006625 "protein
targeting to peroxisome" evidence=IMP] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0016558 "protein import into
peroxisome matrix" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005778 EMBL:AC021043
HSSP:P16649 GO:GO:0080008 GO:GO:0006625 TCDB:3.A.20.1.2
EMBL:AF130973 EMBL:BT024863 IPI:IPI00548845 PIR:B86415
RefSeq:NP_174220.1 UniGene:At.11271 ProteinModelPortal:Q9XF57
SMR:Q9XF57 STRING:Q9XF57 PaxDb:Q9XF57 PRIDE:Q9XF57
EnsemblPlants:AT1G29260.1 GeneID:839800 KEGG:ath:AT1G29260
GeneFarm:3660 TAIR:At1g29260 HOGENOM:HOG000204332 InParanoid:Q9LP54
KO:K13341 OMA:GHEYAVR PhylomeDB:Q9XF57 ProtClustDB:CLSN2679693
Genevestigator:Q9XF57 Uniprot:Q9XF57
Length = 317
Score = 182 (69.1 bits), Expect = 4.1e-11, P = 4.1e-11
Identities = 51/185 (27%), Positives = 82/185 (44%)
Query: 261 PTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTN 320
P+ P+ SF H E ++D++ T T + +W + + ++ H
Sbjct: 95 PSNPIRSFQEHAREVQSVDYNPTRRDSFLTSSWDDTVKLWAMDRPASVRTFKE----HAY 150
Query: 321 SVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPL 380
V W+P V AS S D ++RIWD R S M+ +P AH ++ WN+ +
Sbjct: 151 CVYQAVWNPKHGDVFASASGDCTLRIWDVR--EPGSTMI-IP-AHDFEILSCDWNKYDDC 206
Query: 381 IVSGGD-DGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALW 439
I++ D + VWD+R ++ +A H V V++ P S AS D + LW
Sbjct: 207 ILATSSVDKTVKVWDVRSYRV--PLAVLNGHGYAVRKVKFSPHRRSLIASCSYDMSVCLW 264
Query: 440 DLAVE 444
D VE
Sbjct: 265 DYMVE 269
Score = 143 (55.4 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 43/158 (27%), Positives = 70/158 (44%)
Query: 286 GVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIR 345
G+L G IH+ GA V + ++V D+ WS VL + D S++
Sbjct: 32 GILGNG----RIHV-LELAPGAPGVTESVSYDTADAVYDVCWSESHDSVLIAAIGDGSVK 86
Query: 346 IWDTRVINTKSCMLTLPNAHTSDVNVISWN--RTEPLIVSGGDDGCIHVWDLRRFKKGSS 403
I+DT + + + + H +V + +N R + + S DD + +W + R +S
Sbjct: 87 IYDTALPPPSNPIRSFQE-HAREVQSVDYNPTRRDSFLTSSWDD-TVKLWAMDR---PAS 141
Query: 404 VATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDL 441
V TFK H V W+P FAS D + +WD+
Sbjct: 142 VRTFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWDV 179
Score = 141 (54.7 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 42/181 (23%), Positives = 75/181 (41%)
Query: 267 SFSGHLTEGFAMDWSSTEPGVLAT--GDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVED 324
+F H + W+ V A+ GDC + IW RE G+ + + H +
Sbjct: 144 TFKEHAYCVYQAVWNPKHGDVFASASGDC--TLRIWDVREPGSTMI----IPAHDFEILS 197
Query: 325 LQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWN-RTEPLIVS 383
W+ + +LA+ SVD ++++WD R +L N H V + ++ LI S
Sbjct: 198 CDWNKYDDCILATSSVDKTVKVWDVRSYRVPLAVL---NGHGYAVRKVKFSPHRRSLIAS 254
Query: 384 GGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAV 443
D + +WD + + V + HHT ++ AS G D+ + +W +
Sbjct: 255 CSYDMSVCLWDY--MVEDALVGRYDHHTEFAVGIDMSVLVEGLMASTGWDELVYVWQQGM 312
Query: 444 E 444
+
Sbjct: 313 D 313
Score = 101 (40.6 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 20/86 (23%), Positives = 47/86 (54%)
Query: 366 TSD-VNVISWNRT-EPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTE 423
T+D V + W+ + + ++++ DG + ++D + + +F+ H V +V+++PT
Sbjct: 59 TADAVYDVCWSESHDSVLIAAIGDGSVKIYDTALPPPSNPIRSFQEHAREVQSVDYNPTR 118
Query: 424 SSTFASGGADDQIALWDLAVERDSEI 449
+F + DD + LW A++R + +
Sbjct: 119 RDSFLTSSWDDTVKLW--AMDRPASV 142
Score = 97 (39.2 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 32/122 (26%), Positives = 57/122 (46%)
Query: 651 SFSGHLTEGFAMDWSSTEPGVLAT--GDCKRNIHIWTPREAGAWSVY------LYT---N 699
+F H + W+ V A+ GDC + IW RE G+ + + + N
Sbjct: 144 TFKEHAYCVYQAVWNPKHGDVFASASGDC--TLRIWDVREPGSTMIIPAHDFEILSCDWN 201
Query: 700 RFG--VLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVD 757
++ +LAT + + +W R +++V L GH +V +++SP + ++ASCS D
Sbjct: 202 KYDDCILATSSVDKTVKVWDVR---SYRVPLAVLNGHGYAVRKVKFSPHRRSLIASCSYD 258
Query: 758 RS 759
S
Sbjct: 259 MS 260
Score = 49 (22.3 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 10/40 (25%), Positives = 18/40 (45%)
Query: 165 PTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIW 204
P+ P+ SF H E ++D++ T T + +W
Sbjct: 95 PSNPIRSFQEHAREVQSVDYNPTRRDSFLTSSWDDTVKLW 134
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 176 (67.0 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 58/206 (28%), Positives = 101/206 (49%)
Query: 252 KKRGKGPGIPTPP-LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQV 310
+KR IP PP ++ SGH + + + V+ + I +W E G ++
Sbjct: 87 QKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVF-SVMVSASEDATIKVWD-YETGDFE- 143
Query: 311 DQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVN 370
+ L GHT+SV+D+ + K +LASCS D++I++WD + C+ T+ + H +V+
Sbjct: 144 --RTLKGHTDSVQDISFDHSGK-LLASCSADMTIKLWDFQGFE---CIRTM-HGHDHNVS 196
Query: 371 VISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASG 430
++ IVS D I +W+++ G V TF H V V P + T +
Sbjct: 197 SVAIMPNGDHIVSASRDKTIKMWEVQT---GYCVKTFTGHREWVRMVR--PNQDGTLIAS 251
Query: 431 GADDQ-IALWDLAVERDSEIEQREAE 455
++DQ + +W +A ++ + E RE E
Sbjct: 252 CSNDQTVRVWVVAT-KECKAELREHE 276
Score = 148 (57.2 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 40/116 (34%), Positives = 61/116 (52%)
Query: 282 STEPG-VLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSV 340
S +PG L +G + I +W G + LVGH N V + + G K +L SC+
Sbjct: 304 SGKPGPFLLSGSRDKTIKMWDV-STGMCLMT---LVGHDNWVRGVLFHSGGKFIL-SCAD 358
Query: 341 DLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLR 396
D ++R+WD + K CM TL NAH V + +++T P +V+G D + VW+ R
Sbjct: 359 DKTLRVWDYK---NKRCMKTL-NAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 122 (48.0 bits), Expect = 0.00038, P = 0.00038
Identities = 42/158 (26%), Positives = 72/158 (45%)
Query: 287 VLATGDCKRNI--HIWTPREAGAWQVDQK--PLVGHTNSVEDLQWSPGEKRVLASCSVDL 342
V+AT +CK + H E +W + + T S PG L S S D
Sbjct: 262 VVATKECKAELREHEHVV-ECISWAPESSYSSISEATGSETKKSGKPGP--FLLSGSRDK 318
Query: 343 SIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGS 402
+I++WD ++T C++TL H + V + ++ I+S DD + VWD +K
Sbjct: 319 TIKMWD---VSTGMCLMTLVG-HDNWVRGVLFHSGGKFILSCADDKTLRVWD---YKNKR 371
Query: 403 SVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWD 440
+ T H VT++++H T + +G D + +W+
Sbjct: 372 CMKTLNAHEHFVTSLDFHKT-APYVVTGSVDQTVKVWE 408
Score = 54 (24.1 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 731 LVGHTNSVEDLQWSPGEKRVLASCSVDRSNRI 762
LVGH N V + + G K +L SC+ D++ R+
Sbjct: 334 LVGHDNWVRGVLFHSGGKFIL-SCADDKTLRV 364
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 176 (67.0 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 58/206 (28%), Positives = 101/206 (49%)
Query: 252 KKRGKGPGIPTPP-LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQV 310
+KR IP PP ++ SGH + + + V+ + I +W E G ++
Sbjct: 87 QKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVF-SVMVSASEDATIKVWD-YETGDFE- 143
Query: 311 DQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVN 370
+ L GHT+SV+D+ + K +LASCS D++I++WD + C+ T+ + H +V+
Sbjct: 144 --RTLKGHTDSVQDISFDHSGK-LLASCSADMTIKLWDFQGFE---CIRTM-HGHDHNVS 196
Query: 371 VISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASG 430
++ IVS D I +W+++ G V TF H V V P + T +
Sbjct: 197 SVAIMPNGDHIVSASRDKTIKMWEVQT---GYCVKTFTGHREWVRMVR--PNQDGTLIAS 251
Query: 431 GADDQ-IALWDLAVERDSEIEQREAE 455
++DQ + +W +A ++ + E RE E
Sbjct: 252 CSNDQTVRVWVVAT-KECKAELREHE 276
Score = 148 (57.2 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 40/116 (34%), Positives = 61/116 (52%)
Query: 282 STEPG-VLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSV 340
S +PG L +G + I +W G + LVGH N V + + G K +L SC+
Sbjct: 304 SGKPGPFLLSGSRDKTIKMWDV-STGMCLMT---LVGHDNWVRGVLFHSGGKFIL-SCAD 358
Query: 341 DLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLR 396
D ++R+WD + K CM TL NAH V + +++T P +V+G D + VW+ R
Sbjct: 359 DKTLRVWDYK---NKRCMKTL-NAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 122 (48.0 bits), Expect = 0.00038, P = 0.00038
Identities = 42/158 (26%), Positives = 72/158 (45%)
Query: 287 VLATGDCKRNI--HIWTPREAGAWQVDQK--PLVGHTNSVEDLQWSPGEKRVLASCSVDL 342
V+AT +CK + H E +W + + T S PG L S S D
Sbjct: 262 VVATKECKAELREHEHVV-ECISWAPESSYSSISEATGSETKKSGKPGP--FLLSGSRDK 318
Query: 343 SIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGS 402
+I++WD ++T C++TL H + V + ++ I+S DD + VWD +K
Sbjct: 319 TIKMWD---VSTGMCLMTLVG-HDNWVRGVLFHSGGKFILSCADDKTLRVWD---YKNKR 371
Query: 403 SVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWD 440
+ T H VT++++H T + +G D + +W+
Sbjct: 372 CMKTLNAHEHFVTSLDFHKT-APYVVTGSVDQTVKVWE 408
Score = 54 (24.1 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 731 LVGHTNSVEDLQWSPGEKRVLASCSVDRSNRI 762
LVGH N V + + G K +L SC+ D++ R+
Sbjct: 334 LVGHDNWVRGVLFHSGGKFIL-SCADDKTLRV 364
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 176 (67.0 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 58/206 (28%), Positives = 101/206 (49%)
Query: 252 KKRGKGPGIPTPP-LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQV 310
+KR IP PP ++ SGH + + + V+ + I +W E G ++
Sbjct: 87 QKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVF-SVMVSASEDATIKVWD-YETGDFE- 143
Query: 311 DQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVN 370
+ L GHT+SV+D+ + K +LASCS D++I++WD + C+ T+ + H +V+
Sbjct: 144 --RTLKGHTDSVQDISFDHSGK-LLASCSADMTIKLWDFQGFE---CIRTM-HGHDHNVS 196
Query: 371 VISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASG 430
++ IVS D I +W+++ G V TF H V V P + T +
Sbjct: 197 SVAIMPNGDHIVSASRDKTIKMWEVQT---GYCVKTFTGHREWVRMVR--PNQDGTLIAS 251
Query: 431 GADDQ-IALWDLAVERDSEIEQREAE 455
++DQ + +W +A ++ + E RE E
Sbjct: 252 CSNDQTVRVWVVAT-KECKAELREHE 276
Score = 148 (57.2 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 40/116 (34%), Positives = 61/116 (52%)
Query: 282 STEPG-VLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSV 340
S +PG L +G + I +W G + LVGH N V + + G K +L SC+
Sbjct: 304 SGKPGPFLLSGSRDKTIKMWDV-STGMCLMT---LVGHDNWVRGVLFHSGGKFIL-SCAD 358
Query: 341 DLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLR 396
D ++R+WD + K CM TL NAH V + +++T P +V+G D + VW+ R
Sbjct: 359 DKTLRVWDYK---NKRCMKTL-NAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 122 (48.0 bits), Expect = 0.00038, P = 0.00038
Identities = 42/158 (26%), Positives = 72/158 (45%)
Query: 287 VLATGDCKRNI--HIWTPREAGAWQVDQK--PLVGHTNSVEDLQWSPGEKRVLASCSVDL 342
V+AT +CK + H E +W + + T S PG L S S D
Sbjct: 262 VVATKECKAELREHEHVV-ECISWAPESSYSSISEATGSETKKSGKPGP--FLLSGSRDK 318
Query: 343 SIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGS 402
+I++WD ++T C++TL H + V + ++ I+S DD + VWD +K
Sbjct: 319 TIKMWD---VSTGMCLMTLVG-HDNWVRGVLFHSGGKFILSCADDKTLRVWD---YKNKR 371
Query: 403 SVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWD 440
+ T H VT++++H T + +G D + +W+
Sbjct: 372 CMKTLNAHEHFVTSLDFHKT-APYVVTGSVDQTVKVWE 408
Score = 54 (24.1 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 731 LVGHTNSVEDLQWSPGEKRVLASCSVDRSNRI 762
LVGH N V + + G K +L SC+ D++ R+
Sbjct: 334 LVGHDNWVRGVLFHSGGKFIL-SCADDKTLRV 364
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 176 (67.0 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 58/206 (28%), Positives = 101/206 (49%)
Query: 252 KKRGKGPGIPTPP-LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQV 310
+KR IP PP ++ SGH + + + V+ + I +W E G ++
Sbjct: 87 QKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVF-SVMVSASEDATIKVWD-YETGDFE- 143
Query: 311 DQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVN 370
+ L GHT+SV+D+ + K +LASCS D++I++WD + C+ T+ + H +V+
Sbjct: 144 --RTLKGHTDSVQDISFDHSGK-LLASCSADMTIKLWDFQGFE---CIRTM-HGHDHNVS 196
Query: 371 VISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASG 430
++ IVS D I +W+++ G V TF H V V P + T +
Sbjct: 197 SVAIMPNGDHIVSASRDKTIKMWEVQT---GYCVKTFTGHREWVRMVR--PNQDGTLIAS 251
Query: 431 GADDQ-IALWDLAVERDSEIEQREAE 455
++DQ + +W +A ++ + E RE E
Sbjct: 252 CSNDQTVRVWVVAT-KECKAELREHE 276
Score = 148 (57.2 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 40/116 (34%), Positives = 61/116 (52%)
Query: 282 STEPG-VLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSV 340
S +PG L +G + I +W G + LVGH N V + + G K +L SC+
Sbjct: 304 SGKPGPFLLSGSRDKTIKMWDV-STGMCLMT---LVGHDNWVRGVLFHSGGKFIL-SCAD 358
Query: 341 DLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLR 396
D ++R+WD + K CM TL NAH V + +++T P +V+G D + VW+ R
Sbjct: 359 DKTLRVWDYK---NKRCMKTL-NAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 122 (48.0 bits), Expect = 0.00038, P = 0.00038
Identities = 42/158 (26%), Positives = 72/158 (45%)
Query: 287 VLATGDCKRNI--HIWTPREAGAWQVDQK--PLVGHTNSVEDLQWSPGEKRVLASCSVDL 342
V+AT +CK + H E +W + + T S PG L S S D
Sbjct: 262 VVATKECKAELREHEHVV-ECISWAPESSYSSISEATGSETKKSGKPGP--FLLSGSRDK 318
Query: 343 SIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGS 402
+I++WD ++T C++TL H + V + ++ I+S DD + VWD +K
Sbjct: 319 TIKMWD---VSTGMCLMTLVG-HDNWVRGVLFHSGGKFILSCADDKTLRVWD---YKNKR 371
Query: 403 SVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWD 440
+ T H VT++++H T + +G D + +W+
Sbjct: 372 CMKTLNAHEHFVTSLDFHKT-APYVVTGSVDQTVKVWE 408
Score = 54 (24.1 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 731 LVGHTNSVEDLQWSPGEKRVLASCSVDRSNRI 762
LVGH N V + + G K +L SC+ D++ R+
Sbjct: 334 LVGHDNWVRGVLFHSGGKFIL-SCADDKTLRV 364
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 176 (67.0 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 58/206 (28%), Positives = 101/206 (49%)
Query: 252 KKRGKGPGIPTPP-LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQV 310
+KR IP PP ++ SGH + + + V+ + I +W E G ++
Sbjct: 87 QKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVF-SVMVSASEDATIKVWD-YETGDFE- 143
Query: 311 DQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVN 370
+ L GHT+SV+D+ + K +LASCS D++I++WD + C+ T+ + H +V+
Sbjct: 144 --RTLKGHTDSVQDISFDHSGK-LLASCSADMTIKLWDFQGFE---CIRTM-HGHDHNVS 196
Query: 371 VISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASG 430
++ IVS D I +W+++ G V TF H V V P + T +
Sbjct: 197 SVAIMPNGDHIVSASRDKTIKMWEVQT---GYCVKTFTGHREWVRMVR--PNQDGTLIAS 251
Query: 431 GADDQ-IALWDLAVERDSEIEQREAE 455
++DQ + +W +A ++ + E RE E
Sbjct: 252 CSNDQTVRVWVVAT-KECKAELREHE 276
Score = 148 (57.2 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 40/116 (34%), Positives = 61/116 (52%)
Query: 282 STEPG-VLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSV 340
S +PG L +G + I +W G + LVGH N V + + G K +L SC+
Sbjct: 304 SGKPGPFLLSGSRDKTIKMWDV-STGMCLMT---LVGHDNWVRGVLFHSGGKFIL-SCAD 358
Query: 341 DLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLR 396
D ++R+WD + K CM TL NAH V + +++T P +V+G D + VW+ R
Sbjct: 359 DKTLRVWDYK---NKRCMKTL-NAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 122 (48.0 bits), Expect = 0.00038, P = 0.00038
Identities = 42/158 (26%), Positives = 72/158 (45%)
Query: 287 VLATGDCKRNI--HIWTPREAGAWQVDQK--PLVGHTNSVEDLQWSPGEKRVLASCSVDL 342
V+AT +CK + H E +W + + T S PG L S S D
Sbjct: 262 VVATKECKAELREHEHVV-ECISWAPESSYSSISEATGSETKKSGKPGP--FLLSGSRDK 318
Query: 343 SIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGS 402
+I++WD ++T C++TL H + V + ++ I+S DD + VWD +K
Sbjct: 319 TIKMWD---VSTGMCLMTLVG-HDNWVRGVLFHSGGKFILSCADDKTLRVWD---YKNKR 371
Query: 403 SVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWD 440
+ T H VT++++H T + +G D + +W+
Sbjct: 372 CMKTLNAHEHFVTSLDFHKT-APYVVTGSVDQTVKVWE 408
Score = 54 (24.1 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 731 LVGHTNSVEDLQWSPGEKRVLASCSVDRSNRI 762
LVGH N V + + G K +L SC+ D++ R+
Sbjct: 334 LVGHDNWVRGVLFHSGGKFIL-SCADDKTLRV 364
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 176 (67.0 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 58/206 (28%), Positives = 101/206 (49%)
Query: 252 KKRGKGPGIPTPP-LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQV 310
+KR IP PP ++ SGH + + + V+ + I +W E G ++
Sbjct: 87 QKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVF-SVMVSASEDATIKVWD-YETGDFE- 143
Query: 311 DQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVN 370
+ L GHT+SV+D+ + K +LASCS D++I++WD + C+ T+ + H +V+
Sbjct: 144 --RTLKGHTDSVQDISFDHSGK-LLASCSADMTIKLWDFQGFE---CIRTM-HGHDHNVS 196
Query: 371 VISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASG 430
++ IVS D I +W+++ G V TF H V V P + T +
Sbjct: 197 SVAIMPNGDHIVSAARDKTIKMWEVQT---GYCVKTFTGHREWVRMVR--PNQDGTLIAS 251
Query: 431 GADDQ-IALWDLAVERDSEIEQREAE 455
++DQ + +W +A ++ + E RE E
Sbjct: 252 CSNDQTVRVWVVAT-KECKAELREHE 276
Score = 148 (57.2 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 40/116 (34%), Positives = 61/116 (52%)
Query: 282 STEPG-VLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSV 340
S +PG L +G + I +W G + LVGH N V + + G K +L SC+
Sbjct: 304 SGKPGPFLLSGSRDKTIKMWDV-STGMCLMT---LVGHDNWVRGVLFHSGGKFIL-SCAD 358
Query: 341 DLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLR 396
D ++R+WD + K CM TL NAH V + +++T P +V+G D + VW+ R
Sbjct: 359 DKTLRVWDYK---NKRCMKTL-NAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 122 (48.0 bits), Expect = 0.00038, P = 0.00038
Identities = 42/158 (26%), Positives = 72/158 (45%)
Query: 287 VLATGDCKRNI--HIWTPREAGAWQVDQK--PLVGHTNSVEDLQWSPGEKRVLASCSVDL 342
V+AT +CK + H E +W + + T S PG L S S D
Sbjct: 262 VVATKECKAELREHEHVV-ECISWAPESSYSSISEATGSETKKSGKPGP--FLLSGSRDK 318
Query: 343 SIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGS 402
+I++WD ++T C++TL H + V + ++ I+S DD + VWD +K
Sbjct: 319 TIKMWD---VSTGMCLMTLVG-HDNWVRGVLFHSGGKFILSCADDKTLRVWD---YKNKR 371
Query: 403 SVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWD 440
+ T H VT++++H T + +G D + +W+
Sbjct: 372 CMKTLNAHEHFVTSLDFHKT-APYVVTGSVDQTVKVWE 408
Score = 54 (24.1 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 731 LVGHTNSVEDLQWSPGEKRVLASCSVDRSNRI 762
LVGH N V + + G K +L SC+ D++ R+
Sbjct: 334 LVGHDNWVRGVLFHSGGKFIL-SCADDKTLRV 364
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 176 (67.0 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 58/206 (28%), Positives = 101/206 (49%)
Query: 252 KKRGKGPGIPTPP-LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQV 310
+KR IP PP ++ SGH + + + V+ + I +W E G ++
Sbjct: 87 QKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVF-SVMVSASEDATIKVWD-YETGDFE- 143
Query: 311 DQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVN 370
+ L GHT+SV+D+ + K +LASCS D++I++WD + C+ T+ + H +V+
Sbjct: 144 --RTLKGHTDSVQDISFDHSGK-LLASCSADMTIKLWDFQGFE---CIRTM-HGHDHNVS 196
Query: 371 VISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASG 430
++ IVS D I +W+++ G V TF H V V P + T +
Sbjct: 197 SVAIMPNGDHIVSASRDKTIKMWEVQT---GYCVKTFTGHREWVRMVR--PNQDGTLIAS 251
Query: 431 GADDQ-IALWDLAVERDSEIEQREAE 455
++DQ + +W +A ++ + E RE E
Sbjct: 252 CSNDQTVRVWVVAT-KECKAELREHE 276
Score = 148 (57.2 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 40/116 (34%), Positives = 61/116 (52%)
Query: 282 STEPG-VLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSV 340
S +PG L +G + I +W G + LVGH N V + + G K +L SC+
Sbjct: 304 SGKPGPFLLSGSRDKTIKMWDV-STGMCLMT---LVGHDNWVRGVLFHSGGKFIL-SCAD 358
Query: 341 DLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLR 396
D ++R+WD + K CM TL NAH V + +++T P +V+G D + VW+ R
Sbjct: 359 DKTLRVWDYK---NKRCMKTL-NAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 122 (48.0 bits), Expect = 0.00038, P = 0.00038
Identities = 42/158 (26%), Positives = 72/158 (45%)
Query: 287 VLATGDCKRNI--HIWTPREAGAWQVDQK--PLVGHTNSVEDLQWSPGEKRVLASCSVDL 342
V+AT +CK + H E +W + + T S PG L S S D
Sbjct: 262 VVATKECKAELREHEHVV-ECISWAPESSYSSISEATGSETKKSGKPGP--FLLSGSRDK 318
Query: 343 SIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGS 402
+I++WD ++T C++TL H + V + ++ I+S DD + VWD +K
Sbjct: 319 TIKMWD---VSTGMCLMTLVG-HDNWVRGVLFHSGGKFILSCADDKTLRVWD---YKNKR 371
Query: 403 SVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWD 440
+ T H VT++++H T + +G D + +W+
Sbjct: 372 CMKTLNAHEHFVTSLDFHKT-APYVVTGSVDQTVKVWE 408
Score = 54 (24.1 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 731 LVGHTNSVEDLQWSPGEKRVLASCSVDRSNRI 762
LVGH N V + + G K +L SC+ D++ R+
Sbjct: 334 LVGHDNWVRGVLFHSGGKFIL-SCADDKTLRV 364
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 176 (67.0 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 58/206 (28%), Positives = 101/206 (49%)
Query: 252 KKRGKGPGIPTPP-LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQV 310
+KR IP PP ++ SGH + + + V+ + I +W E G ++
Sbjct: 87 QKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVF-SVMVSASEDATIKVWD-YETGDFE- 143
Query: 311 DQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVN 370
+ L GHT+SV+D+ + K +LASCS D++I++WD + C+ T+ + H +V+
Sbjct: 144 --RTLKGHTDSVQDISFDHSGK-LLASCSADMTIKLWDFQGFE---CIRTM-HGHDHNVS 196
Query: 371 VISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASG 430
++ IVS D I +W+++ G V TF H V V P + T +
Sbjct: 197 SVAIMPNGDHIVSASRDKTIKMWEVQT---GYCVKTFTGHREWVRMVR--PNQDGTLIAS 251
Query: 431 GADDQ-IALWDLAVERDSEIEQREAE 455
++DQ + +W +A ++ + E RE E
Sbjct: 252 CSNDQTVRVWVVAT-KECKAELREHE 276
Score = 148 (57.2 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 40/116 (34%), Positives = 61/116 (52%)
Query: 282 STEPG-VLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSV 340
S +PG L +G + I +W G + LVGH N V + + G K +L SC+
Sbjct: 304 SGKPGPFLLSGSRDKTIKMWDV-STGMCLMT---LVGHDNWVRGVLFHSGGKFIL-SCAD 358
Query: 341 DLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLR 396
D ++R+WD + K CM TL NAH V + +++T P +V+G D + VW+ R
Sbjct: 359 DKTLRVWDYK---NKRCMKTL-NAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 122 (48.0 bits), Expect = 0.00038, P = 0.00038
Identities = 42/158 (26%), Positives = 72/158 (45%)
Query: 287 VLATGDCKRNI--HIWTPREAGAWQVDQK--PLVGHTNSVEDLQWSPGEKRVLASCSVDL 342
V+AT +CK + H E +W + + T S PG L S S D
Sbjct: 262 VVATKECKAELREHEHVV-ECISWAPESSYSSISEATGSETKKSGKPGP--FLLSGSRDK 318
Query: 343 SIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGS 402
+I++WD ++T C++TL H + V + ++ I+S DD + VWD +K
Sbjct: 319 TIKMWD---VSTGMCLMTLVG-HDNWVRGVLFHSGGKFILSCADDKTLRVWD---YKNKR 371
Query: 403 SVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWD 440
+ T H VT++++H T + +G D + +W+
Sbjct: 372 CMKTLNAHEHFVTSLDFHKT-APYVVTGSVDQTVKVWE 408
Score = 54 (24.1 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 731 LVGHTNSVEDLQWSPGEKRVLASCSVDRSNRI 762
LVGH N V + + G K +L SC+ D++ R+
Sbjct: 334 LVGHDNWVRGVLFHSGGKFIL-SCADDKTLRV 364
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 176 (67.0 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 58/206 (28%), Positives = 101/206 (49%)
Query: 252 KKRGKGPGIPTPP-LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQV 310
+KR IP PP ++ SGH + + + V+ + I +W E G ++
Sbjct: 87 QKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVF-SVMVSASEDATIKVWD-YETGDFE- 143
Query: 311 DQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVN 370
+ L GHT+SV+D+ + K +LASCS D++I++WD + C+ T+ + H +V+
Sbjct: 144 --RTLKGHTDSVQDISFDHSGK-LLASCSADMTIKLWDFQGFE---CIRTM-HGHDHNVS 196
Query: 371 VISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASG 430
++ IVS D I +W+++ G V TF H V V P + T +
Sbjct: 197 SVAIMPNGDHIVSASRDKTIKMWEVQT---GYCVKTFTGHREWVRMVR--PNQDGTLIAS 251
Query: 431 GADDQ-IALWDLAVERDSEIEQREAE 455
++DQ + +W +A ++ + E RE E
Sbjct: 252 CSNDQTVRVWVVAT-KECKAELREHE 276
Score = 148 (57.2 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 40/116 (34%), Positives = 61/116 (52%)
Query: 282 STEPG-VLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSV 340
S +PG L +G + I +W G + LVGH N V + + G K +L SC+
Sbjct: 304 SGKPGPFLLSGSRDKTIKMWDV-STGMCLMT---LVGHDNWVRGVLFHSGGKFIL-SCAD 358
Query: 341 DLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLR 396
D ++R+WD + K CM TL NAH V + +++T P +V+G D + VW+ R
Sbjct: 359 DKTLRVWDYK---NKRCMKTL-NAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 122 (48.0 bits), Expect = 0.00038, P = 0.00038
Identities = 42/158 (26%), Positives = 72/158 (45%)
Query: 287 VLATGDCKRNI--HIWTPREAGAWQVDQK--PLVGHTNSVEDLQWSPGEKRVLASCSVDL 342
V+AT +CK + H E +W + + T S PG L S S D
Sbjct: 262 VVATKECKAELREHEHVV-ECISWAPESSYSSISEATGSETKKSGKPGP--FLLSGSRDK 318
Query: 343 SIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGS 402
+I++WD ++T C++TL H + V + ++ I+S DD + VWD +K
Sbjct: 319 TIKMWD---VSTGMCLMTLVG-HDNWVRGVLFHSGGKFILSCADDKTLRVWD---YKNKR 371
Query: 403 SVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWD 440
+ T H VT++++H T + +G D + +W+
Sbjct: 372 CMKTLNAHEHFVTSLDFHKT-APYVVTGSVDQTVKVWE 408
Score = 54 (24.1 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 731 LVGHTNSVEDLQWSPGEKRVLASCSVDRSNRI 762
LVGH N V + + G K +L SC+ D++ R+
Sbjct: 334 LVGHDNWVRGVLFHSGGKFIL-SCADDKTLRV 364
>UNIPROTKB|O76071 [details] [associations]
symbol:CIAO1 "Probable cytosolic iron-sulfur protein
assembly protein CIAO1" species:9606 "Homo sapiens" [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0016226 "iron-sulfur
cluster assembly" evidence=IGI] [GO:0071817 "MMXD complex"
evidence=IDA] [GO:0097361 "CIA complex" evidence=IDA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0008284 "positive regulation of cell
proliferation" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008284 eggNOG:COG2319
GO:GO:0006357 GO:GO:0016226 GO:GO:0071817 HOGENOM:HOG000208901
OMA:SWKCVCT CTD:9391 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:U63810 EMBL:EF011618 EMBL:AC004020 EMBL:CR456802
EMBL:AK223257 EMBL:BC001395 EMBL:BC032812 IPI:IPI00008791
RefSeq:NP_004795.1 UniGene:Hs.12109 PDB:3FM0 PDBsum:3FM0
ProteinModelPortal:O76071 SMR:O76071 IntAct:O76071
MINT:MINT-1416717 STRING:O76071 PhosphoSite:O76071 PaxDb:O76071
PeptideAtlas:O76071 PRIDE:O76071 DNASU:9391 Ensembl:ENST00000488633
GeneID:9391 KEGG:hsa:9391 UCSC:uc002svs.3 GeneCards:GC02P096931
HGNC:HGNC:14280 HPA:HPA017882 MIM:604333 neXtProt:NX_O76071
PharmGKB:PA162382269 InParanoid:O76071 PhylomeDB:O76071
ChiTaRS:CIAO1 EvolutionaryTrace:O76071 GenomeRNAi:9391
NextBio:35187 Bgee:O76071 CleanEx:HS_CIAO1 Genevestigator:O76071
GermOnline:ENSG00000144021 Uniprot:O76071
Length = 339
Score = 170 (64.9 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 62/237 (26%), Positives = 110/237 (46%)
Query: 315 LVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISW 374
L GH N V+ + W+P +LA+CS D S+ +W+ + C+ L N+HT DV + W
Sbjct: 101 LEGHENEVKSVAWAPSGN-LLATCSRDKSVWVWEVDEEDEYECVSVL-NSHTQDVKHVVW 158
Query: 375 NRTEPLIVSGGDDGCIHVWDLRRFKKGSSV--ATFKHHTAPVTTVEWHPTESSTFASGGA 432
+ ++ L+ S D + ++ R ++ V AT + H + V ++ + P+ AS
Sbjct: 159 HPSQELLASASYDDTVKLY---REEEDDWVCCATLEGHESTVWSLAFDPS-GQRLASCSD 214
Query: 433 DDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLG---QKEIKELHWHPQLPGTIIST 489
D + +W + + EQ A PS L + I ++ W QL G + +
Sbjct: 215 DRTVRIWRQYLPGN---EQGVACSGSDPSWKCICTLSGFHSRTIYDIAWC-QLTGALATA 270
Query: 490 A-NSGFNIFRTI--SDLPSQLLF---IHLGQKEIKELH---WHPQLPGTIISTANSG 537
+ +F+ SD P Q F HL Q ++++ W+P+ PG + S ++ G
Sbjct: 271 CGDDAIRVFQEDPNSD-PQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDG 326
Score = 163 (62.4 bits), Expect = 4.8e-11, Sum P(2) = 4.8e-11
Identities = 58/214 (27%), Positives = 88/214 (41%)
Query: 287 VLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRI 346
+LA+ R I IW E +W GH +V + WSP LAS S D + I
Sbjct: 30 LLASCGGDRRIRIWGT-EGDSWICKSVLSEGHQRTVRKVAWSPCGN-YLASASFDATTCI 87
Query: 347 WDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVAT 406
W + + C+ TL H ++V ++W + L+ + D + VW++ + V+
Sbjct: 88 WKKNQDDFE-CVTTL-EGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSV 145
Query: 407 FKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERD----SEIEQREAELKDL--- 459
HT V V WHP++ AS DD + L+ E D + +E E+ + L
Sbjct: 146 LNSHTQDVKHVVWHPSQE-LLASASYDDTVKLYR-EEEDDWVCCATLEGHESTVWSLAFD 203
Query: 460 PSQLLFIHLGQKEIKELHWHPQLPGTIISTANSG 493
PS + W LPG A SG
Sbjct: 204 PSGQRLASCSDDRTVRI-WRQYLPGNEQGVACSG 236
Score = 119 (46.9 bits), Expect = 0.00057, P = 0.00057
Identities = 56/247 (22%), Positives = 101/247 (40%)
Query: 171 SFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQ 230
+ GH E ++ W+ + +LAT +++ +W E ++ L HT + +
Sbjct: 100 TLEGHENEVKSVAWAPSG-NLLATCSRDKSVWVWEVDEEDEYEC-VSVLNSHTQDVKHVV 157
Query: 231 WSDLKTALQTV--DDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVL 288
W + L + DD +L + ++ T GH + +++ + + +
Sbjct: 158 WHPSQELLASASYDDTVKL--YREEEDDWVCCAT-----LEGHESTVWSLAFDPSGQRLA 210
Query: 289 ATGDCKRNIHIWT---P-REAGAWQVDQKP-------LVG-HTNSVEDLQWSPGEKRVLA 336
+ D R + IW P E G P L G H+ ++ D+ W +
Sbjct: 211 SCSD-DRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALAT 269
Query: 337 SCSVDLSIRIWDTRVIN-----TKSCMLTLPNAHTSDVNVISWNRTEP-LIVSGGDDGCI 390
+C D +IR++ + T S L AH+ DVN ++WN EP L+ S DDG +
Sbjct: 270 ACGDD-AIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEV 328
Query: 391 HVWDLRR 397
W +R
Sbjct: 329 AFWKYQR 335
Score = 64 (27.6 bits), Expect = 4.8e-11, Sum P(2) = 4.8e-11
Identities = 14/45 (31%), Positives = 21/45 (46%)
Query: 645 PTPPLFSFSGHLTEGFAMD-----WSSTEPGVLATGDCKRNIHIW 684
P P FS + HL + + D W+ EPG+LA+ + W
Sbjct: 287 PQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFW 331
Score = 58 (25.5 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 734 HTNSVEDLQWSPGEKRVLASCSVD 757
H+ V + W+P E +LASCS D
Sbjct: 302 HSQDVNCVAWNPKEPGLLASCSDD 325
>DICTYBASE|DDB_G0287817 [details] [associations]
symbol:wdr24 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0016558 "protein
import into peroxisome matrix" evidence=IEA] [GO:0005777
"peroxisome" evidence=IEA] [GO:0005053 "peroxisome matrix targeting
signal-2 binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0287817 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GenomeReviews:CM000154_GR
EMBL:AAFI02000104 GO:GO:0016558 GO:GO:0005053 PANTHER:PTHR22850:SF4
RefSeq:XP_637077.1 ProteinModelPortal:Q54JS5
EnsemblProtists:DDB0304352 GeneID:8626332 KEGG:ddi:DDB_G0287817
OMA:NEPCKGL Uniprot:Q54JS5
Length = 1023
Score = 182 (69.1 bits), Expect = 4.8e-11, Sum P(2) = 4.8e-11
Identities = 43/157 (27%), Positives = 75/157 (47%)
Query: 287 VLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRI 346
++AT + IW G+ V+ + H+ +V L W P + + + S D ++R+
Sbjct: 85 LIATAATNGAVVIWNTVREGSKSVE-RVFTDHSRAVNKLAWHPEKLDCILTGSQDNTLRM 143
Query: 347 WDTRVINTKSCMLTLPNAHTSDVNVISWNRTEP-LIVSGGDDGCIHVWDLRRFKKGSSVA 405
WD R S + P + + + + +N ++ + D+G I +WD+R K +V
Sbjct: 144 WDIRDSANASKITFSPKSES--IRDVQFNPSQANQFAAAFDNGTIQLWDIR--KPTIAVE 199
Query: 406 TFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442
H V T++WHP E + ASGG D I +WD +
Sbjct: 200 KITSHQGLVLTIDWHPEEKNIIASGGRDRAIRVWDFS 236
Score = 155 (59.6 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 47/178 (26%), Positives = 81/178 (45%)
Query: 268 FSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPRE-AGAWQVDQKPLVGHTNSVEDLQ 326
F+ H + W + + TG + +W R+ A A ++ P + S+ D+Q
Sbjct: 112 FTDHSRAVNKLAWHPEKLDCILTGSQDNTLRMWDIRDSANASKITFSP---KSESIRDVQ 168
Query: 327 WSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEP-LIVSGG 385
++P + A+ + +I++WD R +T +H V I W+ E +I SGG
Sbjct: 169 FNPSQANQFAAAFDNGTIQLWDIRKPTIAVEKIT---SHQGLVLTIDWHPEEKNIIASGG 225
Query: 386 DDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGA--DDQIALWDL 441
D I VWD K ++V+T + V+ ++W P AS + D QI +WD+
Sbjct: 226 RDRAIRVWDFSNGKSLNNVSTI----SSVSRIKWRPGNKWHIASCSSIVDFQIHIWDV 279
Score = 60 (26.2 bits), Expect = 4.8e-11, Sum P(2) = 4.8e-11
Identities = 16/53 (30%), Positives = 27/53 (50%)
Query: 703 VLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCS 755
++A+G R I +W + ++ V +SV ++W PG K +ASCS
Sbjct: 220 IIASGGRDRAIRVWD--FSNGKSLNN---VSTISSVSRIKWRPGNKWHIASCS 267
>UNIPROTKB|E2RNA4 [details] [associations]
symbol:WDR12 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070545 "PeBoW complex" evidence=IEA]
[GO:0030687 "preribosome, large subunit precursor" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0005654 "nucleoplasm"
evidence=IEA] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 KO:K14863 OMA:LQTRFFT
CTD:55759 GeneTree:ENSGT00640000091456 EMBL:AAEX03018031
RefSeq:XP_536036.3 Ensembl:ENSCAFT00000019894 GeneID:478876
KEGG:cfa:478876 Uniprot:E2RNA4
Length = 423
Score = 184 (69.8 bits), Expect = 6.2e-11, P = 6.2e-11
Identities = 62/209 (29%), Positives = 102/209 (48%)
Query: 231 WSDLKTALQT-VDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLA 289
WS + T + +++P K++ + G+ P+ + SGH ++ WS E A
Sbjct: 216 WSAVPTDEEDELEEPTN-RPRKKQKTEQLGLTRTPIVTLSGHKEAISSVLWSDAEEICSA 274
Query: 290 TGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVED-LQWSPGEKRVLASCSVDLSIRIWD 348
+ D I +W E+G+ + L G N V + + +SP KR LAS S D IR+WD
Sbjct: 275 SWD--HTIRVWDV-ESGSLK---STLTG--NKVFNCISYSPLCKR-LASGSTDRHIRLWD 325
Query: 349 TRVINTKSCMLTLPNAHTSDVNVISWNRT-EPLIVSGGDDGCIHVWDLRRFKKGSSVATF 407
R + L+L +HT V + W+ T E ++SG D + +WD R K + +
Sbjct: 326 PRTKDGSLVSLSL-TSHTGWVTSLKWSPTHEQQLISGSLDNIVKLWDTRSCK--APLYDL 382
Query: 408 KHHTAPVTTVEWHPTESSTFASGGADDQI 436
H V +V+W T++ SGGAD+++
Sbjct: 383 AAHEDKVLSVDW--TDTGLLLSGGADNKL 409
Score = 180 (68.4 bits), Expect = 4.9e-11, Sum P(2) = 4.9e-11
Identities = 78/294 (26%), Positives = 122/294 (41%)
Query: 180 FAMDWSSTEPGV---LATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQW---SD 233
F DW S+ G + TG + IW+ + GHT+ +D+ W +
Sbjct: 99 FHDDWISSVRGAEEWILTGSYDKTSRIWSLEGKSIMTIV-----GHTDVVKDVAWVKKDN 153
Query: 234 LKTAL--QTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHL--TEGFAMDWSSTEPGVLA 289
L L ++D L E N +R K L GH + A+D + T+
Sbjct: 154 LSCLLLSSSMDQTILLWEWNVERNK-----VKALHCCRGHAGSVDSIAVDSTGTK---FC 205
Query: 290 TGDCKRNIHIWT----------------PREAGAWQ---VDQKPLV---GHTNSVEDLQW 327
+G + + IW+ PR+ + + + P+V GH ++ + W
Sbjct: 206 SGSWDKMLKIWSAVPTDEEDELEEPTNRPRKKQKTEQLGLTRTPIVTLSGHKEAISSVLW 265
Query: 328 SPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDD 387
S E+ + S S D +IR+WD + KS TL N IS++ + SG D
Sbjct: 266 SDAEE--ICSASWDHTIRVWDVESGSLKS---TLTGNKV--FNCISYSPLCKRLASGSTD 318
Query: 388 GCIHVWDLRRFKKGSSVA-TFKHHTAPVTTVEWHPTESSTFASGGADDQIALWD 440
I +WD R K GS V+ + HT VT+++W PT SG D+ + LWD
Sbjct: 319 RHIRLWDPRT-KDGSLVSLSLTSHTGWVTSLKWSPTHEQQLISGSLDNIVKLWD 371
Score = 147 (56.8 bits), Expect = 7.3e-07, P = 7.3e-07
Identities = 37/104 (35%), Positives = 55/104 (52%)
Query: 288 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIW 347
LA+G R+I +W PR V L HT V L+WSP ++ L S S+D +++W
Sbjct: 312 LASGSTDRHIRLWDPRTKDGSLVSLS-LTSHTGWVTSLKWSPTHEQQLISGSLDNIVKLW 370
Query: 348 DTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIH 391
DTR + K+ + L AH V + W T L++SGG D ++
Sbjct: 371 DTR--SCKAPLYDLA-AHEDKVLSVDWTDTG-LLLSGGADNKLY 410
Score = 136 (52.9 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 54/187 (28%), Positives = 83/187 (44%)
Query: 586 HRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEH-NKKRGKGP-- 642
H G ++ + G+ +G W ++ K IW +A+ T D+ +L E N+ R K
Sbjct: 188 HAGSVDSIAVDSTGTKFCSGSWDKMLK--IW---SAVPT-DEEDELEEPTNRPRKKQKTE 241
Query: 643 --GIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSVYLYTNR 700
G+ P+ + SGH ++ WS E A+ D I +W E+G+ L N+
Sbjct: 242 QLGLTRTPIVTLSGHKEAISSVLWSDAEEICSASWD--HTIRVWDV-ESGSLKSTLTGNK 298
Query: 701 -FGV---------LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRV 750
F LA+G R+I +W PR V L HT V L+WSP ++
Sbjct: 299 VFNCISYSPLCKRLASGSTDRHIRLWDPRTKDGSLVSLS-LTSHTGWVTSLKWSPTHEQQ 357
Query: 751 LASCSVD 757
L S S+D
Sbjct: 358 LISGSLD 364
Score = 80 (33.2 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 23/71 (32%), Positives = 31/71 (43%)
Query: 378 EPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTE--SSTFASGGADDQ 435
E I++G D +W L +G S+ T HT V V W + S S D
Sbjct: 111 EEWILTGSYDKTSRIWSL----EGKSIMTIVGHTDVVKDVAWVKKDNLSCLLLSSSMDQT 166
Query: 436 IALWDLAVERD 446
I LW+ VER+
Sbjct: 167 ILLWEWNVERN 177
Score = 50 (22.7 bits), Expect = 4.9e-11, Sum P(2) = 4.9e-11
Identities = 9/35 (25%), Positives = 19/35 (54%)
Query: 648 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIH 682
PL+ + H + ++DW+ T G+L +G ++
Sbjct: 378 PLYDLAAHEDKVLSVDWTDT--GLLLSGGADNKLY 410
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 192 (72.6 bits), Expect = 5.4e-11, Sum P(2) = 5.4e-11
Identities = 95/346 (27%), Positives = 147/346 (42%)
Query: 167 PPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSA 226
P L + GH ++ S + +LA+G I +W P G Q L GH++S
Sbjct: 32 PELQTLEGH-SDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQT----LEGHSSSV 86
Query: 227 EDLQWSDLKTALQT--VDDPFQL---AEHNKKR---GKGPGIPT----P------PLFSF 268
+ + +S L + D +L A + K G + + P P
Sbjct: 87 QSVAFSPNGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNGQLWNPAIGS 146
Query: 269 SGHLTEGFAMDWS-----STEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVE 323
H EG + DW S + +LA+G ++ I +W G + L GH+N V
Sbjct: 147 LKHTIEGHS-DWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGL----KHTLGGHSNWVL 201
Query: 324 DLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVS 383
L +SP + R+LAS S D +I++WD + K TL H++ + ++++ L+ S
Sbjct: 202 PLVFSP-DGRLLASGSNDATIKLWDPPSGSLKH---TL-EGHSNKIESLAFSPNGQLLAS 256
Query: 384 GGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLA- 442
G D I +WD GS T K H+ V +V + P +S SG D+ I LWD A
Sbjct: 257 GSSDATIKLWDTAT---GSFRHTLKGHSDMVLSVVFSP-DSQLLESGSGDNTIKLWDPAT 312
Query: 443 -VERDSEIEQ---REAELK-DLPSQLLFIHLGQKEIKELHWHPQLP 483
+ + S R E +LP L +LG I+ WH P
Sbjct: 313 GILKHSMRTPGIVRSIEFSIELPQ--LITNLGTFSIQA--WHTGYP 354
Score = 122 (48.0 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 37/132 (28%), Positives = 64/132 (48%)
Query: 292 DCKRNIH--IWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDT 349
DC + + P+ W + + L GH++ +E + +SP + R+LAS S D +I++WD
Sbjct: 12 DCINTLQSTLQRPKVEDNWGPELQTLEGHSDWIETVTFSP-DGRLLASGSNDTTIKLWDP 70
Query: 350 RVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKH 409
K TL H+S V ++++ L+ SG D I +W+ S T +
Sbjct: 71 ASGGLKQ---TL-EGHSSSVQSVAFSPNGQLLASGSSDTTIKLWNSA---SDSLKHTMEG 123
Query: 410 HTAPVTTVEWHP 421
H+ V +V + P
Sbjct: 124 HSDRVESVAFSP 135
Score = 89 (36.4 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 35/123 (28%), Positives = 58/123 (47%)
Query: 655 HLTEGFAMDWS-----STEPGVLATGDCKRNIHIWTPREAGA---------WSVYLYTNR 700
H EG + DW S + +LA+G ++ I +W G W + L +
Sbjct: 149 HTIEGHS-DWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTLGGHSNWVLPLVFSP 207
Query: 701 FG-VLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRS 759
G +LA+G I +W P +G+ + L GH+N +E L +SP + +LAS S D +
Sbjct: 208 DGRLLASGSNDATIKLWDP-PSGSLK---HTLEGHSNKIESLAFSPNGQ-LLASGSSDAT 262
Query: 760 NRI 762
++
Sbjct: 263 IKL 265
Score = 37 (18.1 bits), Expect = 5.4e-11, Sum P(2) = 5.4e-11
Identities = 10/35 (28%), Positives = 17/35 (48%)
Query: 743 WSPGEKRVLASCSVDRSNRIGARR-DMLYCFFVSL 776
W P E + ++S D S +G + ++Y V L
Sbjct: 381 WIPPEYQPISSAVQDSSIALGCKNGQIIYRHTVEL 415
>UNIPROTKB|Q58D20 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:BT021777 IPI:IPI00688704
RefSeq:NP_001014887.1 UniGene:Bt.22388 ProteinModelPortal:Q58D20
STRING:Q58D20 PRIDE:Q58D20 Ensembl:ENSBTAT00000025423 GeneID:509793
KEGG:bta:509793 CTD:54475 HOVERGEN:HBG007602 InParanoid:Q58D20
OrthoDB:EOG4BCDMS NextBio:20869131 Uniprot:Q58D20
Length = 486
Score = 193 (73.0 bits), Expect = 5.5e-11, Sum P(3) = 5.5e-11
Identities = 51/158 (32%), Positives = 78/158 (49%)
Query: 285 PGVLATGDCKRNIHIWTPREAGAWQVDQKPLV---GHTNSVEDLQWSPGEKRVLASCSVD 341
P L +G + +W+P E D+KPL GH + + +SP + RV+AS S D
Sbjct: 342 PERLVSGSDDFTLFLWSPAE------DKKPLARMTGHQALINQVVFSP-DSRVIASASFD 394
Query: 342 LSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKG 401
SI++WD R T + +L H + V I+W+ L+VSG D + VWD++ K
Sbjct: 395 KSIKLWDGR---TGKYLASL-RGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLS 450
Query: 402 SSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALW 439
+ + H V V+W P + ASGG D + +W
Sbjct: 451 TDLPG---HADEVYAVDWSP-DGQRVASGGKDKCLRIW 484
Score = 143 (55.4 bits), Expect = 2.7e-09, Sum P(3) = 2.7e-09
Identities = 52/159 (32%), Positives = 69/159 (43%)
Query: 264 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRN-IHIWTPREAGAWQVDQKPLVGHTNSV 322
P F+ GH ++ WS + LA+G CK I +W P G QV + L GH+ +
Sbjct: 149 PHFTCQGHRHWVLSISWSP-DGKKLASG-CKNGQILLWDP-STGK-QVG-RALTGHSKWI 203
Query: 323 EDLQWSP----GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTE 378
L W P E R +AS S D S+R+WDT C TL H V + W +
Sbjct: 204 TALSWEPLHANPECRYVASSSKDGSVRVWDT---TAGRCERTL-TGHAQSVTCLRWGG-D 258
Query: 379 PLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTV 417
L+ S D I VW R G T + H V T+
Sbjct: 259 GLLYSASQDRTIKVW---RAHDGVLCRTLQGHGHWVNTM 294
Score = 138 (53.6 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 61/255 (23%), Positives = 102/255 (40%)
Query: 171 SFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREA---------GAW------QVD 215
+ +GH + W G+L + R I +W + G W D
Sbjct: 242 TLTGHAQSVTCLRWGGD--GLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTD 299
Query: 216 QKPLGGHTNSAE-DLQWSDLKTALQTVDDPFQLAEHNKKRGKGP-----GIPTPPLFSFS 269
G AE + DL+ +LQ + + L+ +N RG+GP G LF +S
Sbjct: 300 YALRTGAFEPAEASVNAQDLRGSLQELKER-ALSRYNLVRGQGPERLVSGSDDFTLFLWS 358
Query: 270 --------GHLTEGFAMDWS---STEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGH 318
+T A+ S + V+A+ ++I +W R G + L GH
Sbjct: 359 PAEDKKPLARMTGHQALINQVVFSPDSRVIASASFDKSIKLWDGR-TGKYLAS---LRGH 414
Query: 319 TNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTE 378
+V + WS + R+L S S D ++++WD + + LP H +V + W+
Sbjct: 415 VAAVYQIAWS-ADSRLLVSGSSDSTLKVWD---VKAQKLSTDLPG-HADEVYAVDWSPDG 469
Query: 379 PLIVSGGDDGCIHVW 393
+ SGG D C+ +W
Sbjct: 470 QRVASGGKDKCLRIW 484
Score = 128 (50.1 bits), Expect = 1.2e-07, Sum P(3) = 1.2e-07
Identities = 40/135 (29%), Positives = 62/135 (45%)
Query: 315 LVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISW 374
L GH+ +V + +SP K LAS S D ++R WD ++T++ T H V ISW
Sbjct: 111 LEGHSEAVISVAFSPTGK-YLASGSGDTTVRFWD---LSTETPHFTC-QGHRHWVLSISW 165
Query: 375 NRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESST----FASG 430
+ + SG +G I +WD K+ T H+ +T + W P ++ AS
Sbjct: 166 SPDGKKLASGCKNGQILLWDPSTGKQVGRALT--GHSKWITALSWEPLHANPECRYVASS 223
Query: 431 GADDQIALWDLAVER 445
D + +WD R
Sbjct: 224 SKDGSVRVWDTTAGR 238
Score = 72 (30.4 bits), Expect = 2.7e-09, Sum P(3) = 2.7e-09
Identities = 20/62 (32%), Positives = 33/62 (53%)
Query: 704 LATGDCKRNIHIWTPREAGAWQVDQKPLV---GHTNSVEDLQWSPGEKRVLASCSVDRSN 760
L +G + +W+P E D+KPL GH + + +SP + RV+AS S D+S
Sbjct: 345 LVSGSDDFTLFLWSPAE------DKKPLARMTGHQALINQVVFSP-DSRVIASASFDKSI 397
Query: 761 RI 762
++
Sbjct: 398 KL 399
Score = 62 (26.9 bits), Expect = 2.8e-08, Sum P(3) = 2.8e-08
Identities = 20/63 (31%), Positives = 29/63 (46%)
Query: 703 VLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRI 762
+L +G + +W + A D L GH + V + WSP +RV AS D+ RI
Sbjct: 429 LLVSGSSDSTLKVWDVK-AQKLSTD---LPGHADEVYAVDWSPDGQRV-ASGGKDKCLRI 483
Query: 763 GAR 765
R
Sbjct: 484 WRR 486
Score = 58 (25.5 bits), Expect = 7.0e-08, Sum P(3) = 7.0e-08
Identities = 17/60 (28%), Positives = 30/60 (50%)
Query: 703 VLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRI 762
V+A+ ++I +W R G + L GH +V + WS + R+L S S D + ++
Sbjct: 387 VIASASFDKSIKLWDGR-TGKYLAS---LRGHVAAVYQIAWS-ADSRLLVSGSSDSTLKV 441
Score = 53 (23.7 bits), Expect = 2.2e-07, Sum P(3) = 2.2e-07
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 654 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIW 684
GH E +A+DWS V A+G + + IW
Sbjct: 455 GHADEVYAVDWSPDGQRV-ASGGKDKCLRIW 484
Score = 44 (20.5 bits), Expect = 2.7e-09, Sum P(3) = 2.7e-09
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 613 VGIWDLKTALQTVDDPFQLAEHNKKRGKGP 642
V DL+ +LQ + + L+ +N RG+GP
Sbjct: 314 VNAQDLRGSLQELKER-ALSRYNLVRGQGP 342
Score = 41 (19.5 bits), Expect = 5.5e-11, Sum P(3) = 5.5e-11
Identities = 15/65 (23%), Positives = 28/65 (43%)
Query: 171 SFSGHLTEGFAMDW----SSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSA 226
+ +GH A+ W ++ E +A+ ++ +W AG + + L GH S
Sbjct: 195 ALTGHSKWITALSWEPLHANPECRYVASSSKDGSVRVWDTT-AGRCE---RTLTGHAQSV 250
Query: 227 EDLQW 231
L+W
Sbjct: 251 TCLRW 255
Score = 37 (18.1 bits), Expect = 5.5e-11, Sum P(3) = 5.5e-11
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 63 GESLVYDPSAYVMLHEAQTG 82
G+ L++DPS + A TG
Sbjct: 179 GQILLWDPSTGKQVGRALTG 198
>MGI|MGI:2429770 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:2429770 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
EMBL:AL603745 GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855
OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154 CTD:54475
HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS EMBL:BC018399 IPI:IPI00124677
RefSeq:NP_663406.2 UniGene:Mm.29176 ProteinModelPortal:Q8VEJ4
SMR:Q8VEJ4 STRING:Q8VEJ4 PhosphoSite:Q8VEJ4 PaxDb:Q8VEJ4
PRIDE:Q8VEJ4 Ensembl:ENSMUST00000103213 GeneID:217011
KEGG:mmu:217011 InParanoid:B1ARD5 NextBio:375506 Bgee:Q8VEJ4
CleanEx:MM_NLE1 Genevestigator:Q8VEJ4 GermOnline:ENSMUSG00000020692
Uniprot:Q8VEJ4
Length = 485
Score = 192 (72.6 bits), Expect = 5.6e-11, Sum P(2) = 5.6e-11
Identities = 52/159 (32%), Positives = 78/159 (49%)
Query: 285 PGVLATGDCKRNIHIWTPREAGAWQVDQKPLV---GHTNSVEDLQWSPGEKRVLASCSVD 341
P L +G + +W+P E D+KPL GH + + +SP + R++AS S D
Sbjct: 341 PERLVSGSDDFTLFLWSPAE------DKKPLARMTGHQALINQVLFSP-DSRIVASASFD 393
Query: 342 LSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKG 401
SI++WD R T + +L H + V I+W+ L+VSG D + VWD+ K
Sbjct: 394 KSIKLWDGR---TGKYLASL-RGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDV----KA 445
Query: 402 SSVAT-FKHHTAPVTTVEWHPTESSTFASGGADDQIALW 439
+AT H V V+W P + ASGG D + +W
Sbjct: 446 QKLATDLPGHADEVYAVDWSP-DGQRVASGGKDKCLRIW 483
Score = 142 (55.0 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 51/159 (32%), Positives = 69/159 (43%)
Query: 264 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRN-IHIWTPREAGAWQVDQKPLVGHTNSV 322
P F+ GH ++ WS + LA+G CK + +W P G QV + L GH+ +
Sbjct: 148 PHFTCKGHRHWVLSISWSP-DGKKLASG-CKNGQVLLWDP-STGL-QVG-RTLTGHSKWI 202
Query: 323 EDLQWSP----GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTE 378
L W P E R +AS S D S+R+WDT C L HT V + W +
Sbjct: 203 TGLSWEPLHMNPECRYVASSSKDGSVRVWDT---TAGRCERIL-TGHTQSVTCLRWGG-D 257
Query: 379 PLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTV 417
L+ S D I VW R G T + H V T+
Sbjct: 258 GLLYSASQDRTIKVW---RAHDGVLCRTLQGHGHWVNTM 293
Score = 125 (49.1 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 42/140 (30%), Positives = 62/140 (44%)
Query: 315 LVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISW 374
L GH+ +V + +SP K LAS S D ++R WD ++T++ T H V ISW
Sbjct: 110 LEGHSEAVISVAFSPTGK-YLASGSGDTTVRFWD---LSTETPHFTC-KGHRHWVLSISW 164
Query: 375 NRTEPLIVSGGDDGCIHVWDLRRFKKGSSVA-TFKHHTAPVTTVEWHPT----ESSTFAS 429
+ + SG +G + +WD G V T H+ +T + W P E AS
Sbjct: 165 SPDGKKLASGCKNGQVLLWDP---STGLQVGRTLTGHSKWITGLSWEPLHMNPECRYVAS 221
Query: 430 GGADDQIALWDLAVERDSEI 449
D + +WD R I
Sbjct: 222 SSKDGSVRVWDTTAGRCERI 241
Score = 70 (29.7 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 19/62 (30%), Positives = 33/62 (53%)
Query: 704 LATGDCKRNIHIWTPREAGAWQVDQKPLV---GHTNSVEDLQWSPGEKRVLASCSVDRSN 760
L +G + +W+P E D+KPL GH + + +SP + R++AS S D+S
Sbjct: 344 LVSGSDDFTLFLWSPAE------DKKPLARMTGHQALINQVLFSP-DSRIVASASFDKSI 396
Query: 761 RI 762
++
Sbjct: 397 KL 398
Score = 61 (26.5 bits), Expect = 9.2e-08, Sum P(2) = 9.2e-08
Identities = 20/63 (31%), Positives = 29/63 (46%)
Query: 703 VLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRI 762
+L +G + +W + A D L GH + V + WSP +RV AS D+ RI
Sbjct: 428 LLVSGSSDSTLKVWDVK-AQKLATD---LPGHADEVYAVDWSPDGQRV-ASGGKDKCLRI 482
Query: 763 GAR 765
R
Sbjct: 483 WRR 485
Score = 56 (24.8 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 16/60 (26%), Positives = 30/60 (50%)
Query: 703 VLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRI 762
++A+ ++I +W R G + L GH +V + WS + R+L S S D + ++
Sbjct: 386 IVASASFDKSIKLWDGR-TGKYLAS---LRGHVAAVYQIAWS-ADSRLLVSGSSDSTLKV 440
Score = 53 (23.7 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 654 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIW 684
GH E +A+DWS V A+G + + IW
Sbjct: 454 GHADEVYAVDWSPDGQRV-ASGGKDKCLRIW 483
Score = 39 (18.8 bits), Expect = 5.6e-11, Sum P(2) = 5.6e-11
Identities = 15/65 (23%), Positives = 27/65 (41%)
Query: 171 SFSGHLTEGFAMDWS----STEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSA 226
+ +GH + W + E +A+ ++ +W AG + + L GHT S
Sbjct: 194 TLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVWDTT-AGRCE---RILTGHTQSV 249
Query: 227 EDLQW 231
L+W
Sbjct: 250 TCLRW 254
>UNIPROTKB|E2QYX6 [details] [associations]
symbol:PEX7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0008611 "ether lipid biosynthetic process" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005782 "peroxisomal matrix"
evidence=IEA] [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=IEA] [GO:0001958 "endochondral ossification"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0001764 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782 GO:GO:0008611
GO:GO:0016558 GO:GO:0001958 KO:K13341 OMA:GHEYAVR CTD:5191
GO:GO:0005053 GeneTree:ENSGT00700000104578 EMBL:AAEX03000193
RefSeq:XP_541117.2 Ensembl:ENSCAFT00000000399 GeneID:484000
KEGG:cfa:484000 NextBio:20858274 Uniprot:E2QYX6
Length = 323
Score = 181 (68.8 bits), Expect = 5.7e-11, P = 5.7e-11
Identities = 48/183 (26%), Positives = 84/183 (45%)
Query: 262 TPPLFSFSGHLTEGFAMDWSSTE-PGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTN 320
T PL + H E +++DWS T ++ +G + + +W P + + GH +
Sbjct: 101 TGPLQVYKEHTQEVYSVDWSQTRGEQLVVSGSWDQTVKLWDPTVGKSLCTFR----GHES 156
Query: 321 SVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR-TEP 379
+ WSP AS S D ++RIWD + + + +P AH +++ W + E
Sbjct: 157 VIYSTIWSPHIPGCFASASGDQTLRIWDVKSTGVR---IVVP-AHQAEILSCDWCKYNEN 212
Query: 380 LIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALW 439
L+V+G D + WDLR ++ V HT + V++ P +S AS D + W
Sbjct: 213 LLVTGAVDCSLRGWDLRNVRQ--PVFELLGHTYAIRRVKFSPFHASVLASCSYDFTVRFW 270
Query: 440 DLA 442
+ +
Sbjct: 271 NFS 273
Score = 179 (68.1 bits), Expect = 9.8e-11, P = 9.8e-11
Identities = 38/120 (31%), Positives = 61/120 (50%)
Query: 324 DLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRT--EPLI 381
D+ WS + +L +CS D S+++WDT L + HT +V + W++T E L+
Sbjct: 72 DVTWSENNEHILVTCSGDGSLQLWDTAKATGP---LQVYKEHTQEVYSVDWSQTRGEQLV 128
Query: 382 VSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDL 441
VSG D + +WD G S+ TF+ H + + + W P FAS D + +WD+
Sbjct: 129 VSGSWDQTVKLWDPT---VGKSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLRIWDV 185
Score = 138 (53.6 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 56/263 (21%), Positives = 102/263 (38%)
Query: 180 FAMDWSSTEPGVLATGDCKRNIHIW-TPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTAL 238
F + WS +L T ++ +W T + G QV ++ HT + WS +
Sbjct: 71 FDVTWSENNEHILVTCSGDGSLQLWDTAKATGPLQVYKE----HTQEVYSVDWSQTRGEQ 126
Query: 239 QTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIH 298
V + + K P + L +F GH + ++ WS PG A+ + +
Sbjct: 127 LVVSGSW---DQTVKLWD-PTVGKS-LCTFRGHESVIYSTIWSPHIPGCFASASGDQTLR 181
Query: 299 IWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCM 358
IW + G V + H + W + +L + +VD S+R WD R N + +
Sbjct: 182 IWDVKSTGVRIV----VPAHQAEILSCDWCKYNENLLVTGAVDCSLRGWDLR--NVRQPV 235
Query: 359 LTLPNAHTSDVNVISWNRTEP-LIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTV 417
L HT + + ++ ++ S D + W+ K + T +HHT +
Sbjct: 236 FELLG-HTYAIRRVKFSPFHASVLASCSYDFTVRFWNFS--KPDPLLETVEHHTEFTCGL 292
Query: 418 EWHPTESSTFASGGADDQIALWD 440
+ + A D+ I ++D
Sbjct: 293 DLSLQSPTQVADCAWDETIKIYD 315
Score = 133 (51.9 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 45/185 (24%), Positives = 75/185 (40%)
Query: 166 TPPLFSFSGHLTEGFAMDWSSTE-PGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTN 224
T PL + H E +++DWS T ++ +G + + +W P + + GH +
Sbjct: 101 TGPLQVYKEHTQEVYSVDWSQTRGEQLVVSGSWDQTVKLWDPTVGKSLCTFR----GHES 156
Query: 225 SAEDLQWSD-LKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSST 283
WS + + L + K G I P H E + DW
Sbjct: 157 VIYSTIWSPHIPGCFASASGDQTLRIWDVK-STGVRIVVP------AHQAEILSCDWCKY 209
Query: 284 EPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLS 343
+L TG ++ W R + L+GHT ++ +++SP VLASCS D +
Sbjct: 210 NENLLVTGAVDCSLRGWDLRNVRQPVFE---LLGHTYAIRRVKFSPFHASVLASCSYDFT 266
Query: 344 IRIWD 348
+R W+
Sbjct: 267 VRFWN 271
Score = 107 (42.7 bits), Expect = 9.8e-09, Sum P(2) = 9.8e-09
Identities = 31/118 (26%), Positives = 56/118 (47%)
Query: 649 LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSVYLYTNRFGVLATGD 708
L +F GH + ++ WS PG A+ + + IW + G + + ++ +L+
Sbjct: 148 LCTFRGHESVIYSTIWSPHIPGCFASASGDQTLRIWDVKSTGV-RIVVPAHQAEILSCDW 206
Query: 709 CKRNIHIWTPREAGA----WQVD--QKP---LVGHTNSVEDLQWSPGEKRVLASCSVD 757
CK N ++ W + ++P L+GHT ++ +++SP VLASCS D
Sbjct: 207 CKYNENLLVTGAVDCSLRGWDLRNVRQPVFELLGHTYAIRRVKFSPFHASVLASCSYD 264
Score = 102 (41.0 bits), Expect = 9.8e-09, Sum P(2) = 9.8e-09
Identities = 22/74 (29%), Positives = 36/74 (48%)
Query: 372 ISWNRT-EPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASG 430
++W+ E ++V+ DG + +WD K + +K HT V +V+W T
Sbjct: 73 VTWSENNEHILVTCSGDGSLQLWDTA--KATGPLQVYKEHTQEVYSVDWSQTRGEQLVVS 130
Query: 431 GADDQ-IALWDLAV 443
G+ DQ + LWD V
Sbjct: 131 GSWDQTVKLWDPTV 144
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 183 (69.5 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 57/179 (31%), Positives = 82/179 (45%)
Query: 267 SFSGHLTEGFAMDWSSTEPGVLATGDCK--RNIHIWTPREAGAWQVDQKPLVGHTNSVED 324
+ +GH + WSS V++ D K + I T R K L GH N V
Sbjct: 124 TLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMT-------KTLKGHNNYVFC 176
Query: 325 LQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSG 384
++P + ++ S S D S+RIWD + T C+ TLP AH+ V+ +S+NR LI SG
Sbjct: 177 CNFNP-QSSLVVSGSFDESVRIWD---VKTGMCIKTLP-AHSDPVSAVSFNRDGSLIASG 231
Query: 385 GDDGCIHVWDLRRFKKGSSVATF-KHHTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442
DG + +WD G + T PV V++ P AS D + LWD +
Sbjct: 232 SYDGLVRIWDTAN---GQCIKTLVDDENPPVAFVKFSPNGKYILASN-LDSTLKLWDFS 286
Score = 170 (64.9 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 45/155 (29%), Positives = 73/155 (47%)
Query: 288 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIW 347
L T + + IW + ++ L GH V D+ WS + R + S S D +++I+
Sbjct: 102 LGTSSADKTVKIWNMDH----MICERTLTGHKLGVNDIAWS-SDSRCVVSASDDKTLKIF 156
Query: 348 DTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATF 407
+ I T TL H + V ++N L+VSG D + +WD+ K G + T
Sbjct: 157 E---IVTSRMTKTL-KGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDV---KTGMCIKTL 209
Query: 408 KHHTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442
H+ PV+ V ++ + S ASG D + +WD A
Sbjct: 210 PAHSDPVSAVSFN-RDGSLIASGSYDGLVRIWDTA 243
Score = 143 (55.4 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 37/127 (29%), Positives = 63/127 (49%)
Query: 315 LVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISW 374
L GHT S+ ++SP K L + S D +++IW+ ++ C TL H VN I+W
Sbjct: 83 LEGHTKSISSAKFSPCGK-YLGTSSADKTVKIWN---MDHMICERTL-TGHKLGVNDIAW 137
Query: 375 NRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADD 434
+ +VS DD + ++++ + T K H V ++P +SS SG D+
Sbjct: 138 SSDSRCVVSASDDKTLKIFEIVTSRM---TKTLKGHNNYVFCCNFNP-QSSLVVSGSFDE 193
Query: 435 QIALWDL 441
+ +WD+
Sbjct: 194 SVRIWDV 200
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 183 (69.5 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 57/179 (31%), Positives = 82/179 (45%)
Query: 267 SFSGHLTEGFAMDWSSTEPGVLATGDCK--RNIHIWTPREAGAWQVDQKPLVGHTNSVED 324
+ +GH + WSS V++ D K + I T R K L GH N V
Sbjct: 124 TLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMT-------KTLKGHNNYVFC 176
Query: 325 LQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSG 384
++P + ++ S S D S+RIWD + T C+ TLP AH+ V+ +S+NR LI SG
Sbjct: 177 CNFNP-QSSLVVSGSFDESVRIWD---VKTGMCIKTLP-AHSDPVSAVSFNRDGSLIASG 231
Query: 385 GDDGCIHVWDLRRFKKGSSVATF-KHHTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442
DG + +WD G + T PV V++ P AS D + LWD +
Sbjct: 232 SYDGLVRIWDTAN---GQCIKTLVDDENPPVAFVKFSPNGKYILASN-LDSTLKLWDFS 286
Score = 170 (64.9 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 45/155 (29%), Positives = 73/155 (47%)
Query: 288 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIW 347
L T + + IW + ++ L GH V D+ WS + R + S S D +++I+
Sbjct: 102 LGTSSADKTVKIWNMDH----MICERTLTGHKLGVNDIAWS-SDSRCVVSASDDKTLKIF 156
Query: 348 DTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATF 407
+ I T TL H + V ++N L+VSG D + +WD+ K G + T
Sbjct: 157 E---IVTSRMTKTL-KGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDV---KTGMCIKTL 209
Query: 408 KHHTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442
H+ PV+ V ++ + S ASG D + +WD A
Sbjct: 210 PAHSDPVSAVSFN-RDGSLIASGSYDGLVRIWDTA 243
Score = 143 (55.4 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 37/127 (29%), Positives = 63/127 (49%)
Query: 315 LVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISW 374
L GHT S+ ++SP K L + S D +++IW+ ++ C TL H VN I+W
Sbjct: 83 LEGHTKSISSAKFSPCGK-YLGTSSADKTVKIWN---MDHMICERTL-TGHKLGVNDIAW 137
Query: 375 NRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADD 434
+ +VS DD + ++++ + T K H V ++P +SS SG D+
Sbjct: 138 SSDSRCVVSASDDKTLKIFEIVTSRM---TKTLKGHNNYVFCCNFNP-QSSLVVSGSFDE 193
Query: 435 QIALWDL 441
+ +WD+
Sbjct: 194 SVRIWDV 200
>DICTYBASE|DDB_G0295761 [details] [associations]
symbol:nle1 "putative notchless" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0295761 InterPro:IPR001632
GO:GO:0005634 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 PRINTS:PR00319
KO:K14855 OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154
RefSeq:XP_002649195.1 ProteinModelPortal:C7FZX3
EnsemblProtists:DDB0252725 GeneID:8616962 KEGG:ddi:DDB_G0295761
Uniprot:C7FZX3
Length = 507
Score = 168 (64.2 bits), Expect = 6.0e-11, Sum P(2) = 6.0e-11
Identities = 71/260 (27%), Positives = 104/260 (40%)
Query: 264 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVE 323
P + GH + WS + AT + +I IW P + G Q+ L GHT +
Sbjct: 174 PTHTLKGHTNWVLQVAWSPDSKKI-ATAGMEGDIRIWCP-QTGK-QLGST-LKGHTKFIT 229
Query: 324 DLQWSP---GEKRV-LASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEP 379
L W P K V LAS S D +IRIWDT + K+ M +L + HT V + W E
Sbjct: 230 GLSWEPFHLNPKCVRLASSSKDSTIRIWDTE--SCKNLM-SL-SGHTMSVTCLKWGG-EG 284
Query: 380 LIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALW 439
LI SG D + V++ G V H V T+ + T+ +G D +
Sbjct: 285 LIYSGSQDRTVRVFNTT---DGRLVRVLDGHAHWVNTLALN-TDY-VLRTGSYDHTGKEY 339
Query: 440 DLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRT 499
D E +R ++K + + G + + W+P + T IS +
Sbjct: 340 DTLEEAQRVALERYNDVKAKSKGMEILISGSDDFTVIMWNPSVTKTSISRLTGHQQLINL 399
Query: 500 ISDLPSQLLFIHLG-QKEIK 518
+S P F K IK
Sbjct: 400 VSFSPDGRYFASASFDKSIK 419
Score = 146 (56.5 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 40/153 (26%), Positives = 64/153 (41%)
Query: 287 VLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRI 346
+L +G + +W P + L GH + + +SP + R AS S D SI++
Sbjct: 365 ILISGSDDFTVIMWNP---SVTKTSISRLTGHQQLINLVSFSP-DGRYFASASFDKSIKL 420
Query: 347 WDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVAT 406
WD + L H V + W+ +VSG D + +WD++ K +
Sbjct: 421 WDGQ----SGKFLGNFRGHVGAVYQVCWSSDSRYLVSGSKDSTLKIWDIKTKKMEKELPG 476
Query: 407 FKHHTAPVTTVEWHPTESSTFASGGADDQIALW 439
H V TV+W P + ASG D + +W
Sbjct: 477 ---HADEVYTVDWSP-DGDRVASGSKDRLLRIW 505
Score = 138 (53.6 bits), Expect = 2.9e-07, Sum P(3) = 2.9e-07
Identities = 41/128 (32%), Positives = 61/128 (47%)
Query: 317 GHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR 376
GHT +V + +SP K + S D ++RIWD I T + TL HT+ V ++W+
Sbjct: 138 GHTEAVLNCAFSPDGKGFV-SVGGDTTVRIWD---IYTSTPTHTL-KGHTNWVLQVAWSP 192
Query: 377 TEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESST----FASGGA 432
I + G +G I +W + K+ S T K HT +T + W P + AS
Sbjct: 193 DSKKIATAGMEGDIRIWCPQTGKQLGS--TLKGHTKFITGLSWEPFHLNPKCVRLASSSK 250
Query: 433 DDQIALWD 440
D I +WD
Sbjct: 251 DSTIRIWD 258
Score = 128 (50.1 bits), Expect = 3.5e-06, Sum P(3) = 3.5e-06
Identities = 55/211 (26%), Positives = 84/211 (39%)
Query: 215 DQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIP-TPPLFSFSGHLT 273
+Q P N E ++LK L+ + D L+ + + + P T S SGH
Sbjct: 84 EQLPYSFFVNDQEIT--NNLKNHLEGLSDETTLSIYYQPQAVFRVRPVTRCASSMSGHTE 141
Query: 274 EGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKR 333
+S G ++ G + IW + L GHTN V + WSP K+
Sbjct: 142 AVLNCAFSPDGKGFVSVGG-DTTVRIWDIYTS----TPTHTLKGHTNWVLQVAWSPDSKK 196
Query: 334 VLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWN--RTEPLIV---SGGDDG 388
+ A+ ++ IRIW + K TL HT + +SW P V S D
Sbjct: 197 I-ATAGMEGDIRIWCPQT--GKQLGSTL-KGHTKFITGLSWEPFHLNPKCVRLASSSKDS 252
Query: 389 CIHVWDLRRFKKGSSVATFKHHTAPVTTVEW 419
I +WD K ++ + HT VT ++W
Sbjct: 253 TIRIWDTESCK---NLMSLSGHTMSVTCLKW 280
Score = 112 (44.5 bits), Expect = 7.1e-05, Sum P(2) = 7.1e-05
Identities = 29/112 (25%), Positives = 50/112 (44%)
Query: 334 VLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVW 393
+L S S D ++ +W+ V T LT H +N++S++ S D I +W
Sbjct: 365 ILISGSDDFTVIMWNPSVTKTSISRLT---GHQQLINLVSFSPDGRYFASASFDKSIKLW 421
Query: 394 DLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVER 445
D + G + F+ H V V W ++S SG D + +WD+ ++
Sbjct: 422 D---GQSGKFLGNFRGHVGAVYQVCWS-SDSRYLVSGSKDSTLKIWDIKTKK 469
Score = 65 (27.9 bits), Expect = 6.0e-11, Sum P(2) = 6.0e-11
Identities = 17/35 (48%), Positives = 20/35 (57%)
Query: 728 QKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRI 762
+K L GH + V + WSP RV AS S DR RI
Sbjct: 471 EKELPGHADEVYTVDWSPDGDRV-ASGSKDRLLRI 504
Score = 58 (25.5 bits), Expect = 3.2e-10, Sum P(2) = 3.2e-10
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 654 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWT 685
GH E + +DWS V A+G R + IWT
Sbjct: 476 GHADEVYTVDWSPDGDRV-ASGSKDRLLRIWT 506
Score = 37 (18.1 bits), Expect = 2.9e-07, Sum P(3) = 2.9e-07
Identities = 8/35 (22%), Positives = 14/35 (40%)
Query: 513 GQKEIKELHWHPQLPGTIISTANSGFNIFRTISMS 547
G + + W+P + T IS + +S S
Sbjct: 369 GSDDFTVIMWNPSVTKTSISRLTGHQQLINLVSFS 403
>UNIPROTKB|Q28DW0 [details] [associations]
symbol:ciao1 "Probable cytosolic iron-sulfur protein
assembly protein ciao1" species:8364 "Xenopus (Silurana)
tropicalis" [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] [GO:0097361 "CIA complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226
HOGENOM:HOG000208901 HSSP:P63005 CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:CR848572 EMBL:BC127279 RefSeq:NP_001016887.1
UniGene:Str.66175 ProteinModelPortal:Q28DW0 STRING:Q28DW0
Ensembl:ENSXETT00000009442 GeneID:549641 KEGG:xtr:549641
Xenbase:XB-GENE-1010751 OMA:EEEYECV Bgee:Q28DW0 Uniprot:Q28DW0
Length = 333
Score = 163 (62.4 bits), Expect = 7.0e-11, Sum P(2) = 7.0e-11
Identities = 64/278 (23%), Positives = 121/278 (43%)
Query: 270 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSP 329
GH + WS LA+ IW ++ + L GH N V+ + W+P
Sbjct: 59 GHQRTVRKVSWSPCG-NYLASASFDATTCIWMKKKEEFECITT--LEGHENEVKSVAWAP 115
Query: 330 GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGC 389
+LA+CS D S+ +W+ C+ L N+HT DV + W+ + L+ S D
Sbjct: 116 SGS-LLATCSRDKSVWVWEVDEEEEYECVSVL-NSHTQDVKHVVWHPNQELLASASYDDS 173
Query: 390 IHVWDLRRFKKGSSV--ATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDS 447
+ ++ R ++ V AT + HT+ V ++ + T A+ D + +W +
Sbjct: 174 VKLY---REEEDDWVCCATLEGHTSTVWSLAFDQT-GEQLATCSDDKTVRIWR-QLGTGE 228
Query: 448 EIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTA-NSGFNIFRTI--SD-- 502
+ + + K + + L H + + +++W+ L G I + + IF SD
Sbjct: 229 QGSKSDPNWKCVCT-LTGYHT--RTVYDVNWN-HLTGAIATACGDDAVRIFEEDPGSDPL 284
Query: 503 LPSQLLFIHLGQKEIKELH---WHPQLPGTIISTANSG 537
P+ L H+ + ++++ WHP+ P + S ++ G
Sbjct: 285 QPTFSLTAHMPRAHTQDVNCVTWHPKEPNLLASCSDDG 322
Score = 161 (61.7 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 43/153 (28%), Positives = 69/153 (45%)
Query: 287 VLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRI 346
+LA+ R I IW ++ W GH +V + WSP LAS S D + I
Sbjct: 30 LLASCGGDRTIRIWG-KDGDNWVCKSVLGEGHQRTVRKVSWSPCGN-YLASASFDATTCI 87
Query: 347 WDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVAT 406
W + + C+ TL H ++V ++W + L+ + D + VW++ ++ V+
Sbjct: 88 WMKKKEEFE-CITTL-EGHENEVKSVAWAPSGSLLATCSRDKSVWVWEVDEEEEYECVSV 145
Query: 407 FKHHTAPVTTVEWHPTESSTFASGGADDQIALW 439
HT V V WHP + AS DD + L+
Sbjct: 146 LNSHTQDVKHVVWHPNQE-LLASASYDDSVKLY 177
Score = 142 (55.0 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 53/178 (29%), Positives = 79/178 (44%)
Query: 280 WSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSP-GEKRVLASC 338
W + +LA+ ++ ++ E W V L GHT++V L + GE+ LA+C
Sbjct: 158 WHPNQE-LLASASYDDSVKLYREEEDD-W-VCCATLEGHTSTVWSLAFDQTGEQ--LATC 212
Query: 339 SVDLSIRIW---DTRVINTKS-----CMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCI 390
S D ++RIW T +KS C+ TL HT V ++WN I + D +
Sbjct: 213 SDDKTVRIWRQLGTGEQGSKSDPNWKCVCTLTGYHTRTVYDVNWNHLTGAIATACGDDAV 272
Query: 391 HVWDLRRFKKGSSVA--TFK---H----HTAPVTTVEWHPTESSTFASGGADDQIALW 439
+++ GS TF H HT V V WHP E + AS D ++A W
Sbjct: 273 RIFEE---DPGSDPLQPTFSLTAHMPRAHTQDVNCVTWHPKEPNLLASCSDDGEMAFW 327
Score = 62 (26.9 bits), Expect = 7.0e-11, Sum P(2) = 7.0e-11
Identities = 12/24 (50%), Positives = 14/24 (58%)
Query: 734 HTNSVEDLQWSPGEKRVLASCSVD 757
HT V + W P E +LASCS D
Sbjct: 298 HTQDVNCVTWHPKEPNLLASCSDD 321
Score = 54 (24.1 bits), Expect = 7.8e-10, Sum P(2) = 7.8e-10
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 703 VLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSP-GEKRVLASCSVDRSNR 761
+LA+ ++ ++ E W V L GHT++V L + GE+ LA+CS D++ R
Sbjct: 164 LLASASYDDSVKLYREEEDD-W-VCCATLEGHTSTVWSLAFDQTGEQ--LATCSDDKTVR 219
Query: 762 I 762
I
Sbjct: 220 I 220
Score = 53 (23.7 bits), Expect = 9.9e-10, Sum P(2) = 9.9e-10
Identities = 21/78 (26%), Positives = 31/78 (39%)
Query: 616 WD-LKTALQTV--DDPFQLAEHNKKRGKGPGI-PTPPLFSFSGHLTEGFAMD-----WSS 666
W+ L A+ T DD ++ E + PG P P FS + H+ D W
Sbjct: 256 WNHLTGAIATACGDDAVRIFEED------PGSDPLQPTFSLTAHMPRAHTQDVNCVTWHP 309
Query: 667 TEPGVLATGDCKRNIHIW 684
EP +LA+ + W
Sbjct: 310 KEPNLLASCSDDGEMAFW 327
Score = 45 (20.9 bits), Expect = 6.6e-09, Sum P(2) = 6.6e-09
Identities = 18/64 (28%), Positives = 27/64 (42%)
Query: 704 LATGDCKRNIHIWTPREAGAWQVDQK--P-------LVG-HTNSVEDLQWSPGEKRVLAS 753
LAT + + IW R+ G + K P L G HT +V D+ W+ + +
Sbjct: 209 LATCSDDKTVRIW--RQLGTGEQGSKSDPNWKCVCTLTGYHTRTVYDVNWNHLTGAIATA 266
Query: 754 CSVD 757
C D
Sbjct: 267 CGDD 270
>WB|WBGene00011051 [details] [associations]
symbol:pfs-2 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0018996 "molting cycle, collagen and cuticulin-based cuticle"
evidence=IMP] [GO:0044428 "nuclear part" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0018996 eggNOG:COG2319 GO:GO:0040011
HSSP:P16649 GO:GO:0044428 GeneTree:ENSGT00540000070914 EMBL:Z83120
KO:K15542 RefSeq:NP_496985.1 ProteinModelPortal:Q9NAN8 SMR:Q9NAN8
PaxDb:Q9NAN8 EnsemblMetazoa:R06A4.9.1 EnsemblMetazoa:R06A4.9.2
GeneID:175092 KEGG:cel:CELE_R06A4.9 UCSC:R06A4.9.1 CTD:175092
WormBase:R06A4.9 InParanoid:Q9NAN8 OMA:LTKFIRT NextBio:886718
Uniprot:Q9NAN8
Length = 809
Score = 188 (71.2 bits), Expect = 7.4e-11, P = 7.4e-11
Identities = 52/185 (28%), Positives = 87/185 (47%)
Query: 268 FSGHLTEGF-AMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQ 326
FS H E + ++ T+ AT +W A +++ L GH V +
Sbjct: 212 FSAHKDEAIRGLAFAPTDVK-FATASDDGTARVWD----FARYTEERVLRGHGAEVRCID 266
Query: 327 WSPGEKRVLASCSVDLS--IRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSG 384
W P K ++A+ S D ++IWD + + SC+ TL H S V + +N+ +++G
Sbjct: 267 WHP-TKGLIATGSRDTQQPVKIWDPK---SGSCLATLQE-HKSSVMAVEFNKNGNWLLTG 321
Query: 385 GDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444
G D + ++D+R K+ + T++ H V ++ WHP F SGG D I W V+
Sbjct: 322 GRDHLVKMYDIRMMKE---MRTYRAHKKEVISLAWHPIHEGLFVSGGGDGSIVYW--MVD 376
Query: 445 RDSEI 449
+ EI
Sbjct: 377 GEKEI 381
Score = 155 (59.6 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 48/174 (27%), Positives = 83/174 (47%)
Query: 270 GHLTEGFAMDWSSTEPGVLATG--DCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQW 327
GH E +DW T+ G++ATG D ++ + IW P+ Q+ H +SV +++
Sbjct: 257 GHGAEVRCIDWHPTK-GLIATGSRDTQQPVKIWDPKSGSCLATLQE----HKSSVMAVEF 311
Query: 328 SPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRT-EPLIVSGGD 386
+ +L D ++++D R++ M T AH +V ++W+ E L VSGG
Sbjct: 312 NKNGNWLLTG-GRDHLVKMYDIRMMKE---MRTY-RAHKKEVISLAWHPIHEGLFVSGGG 366
Query: 387 DGCIHVWDLRRFKKGSSVATFKH-HTAPVTTVEWHPTESSTFASGGADDQIALW 439
DG I W + K+ + +H H + +++WHP A+G D+ W
Sbjct: 367 DGSIVYWMVDGEKE---IGLLEHAHDQAIWSMKWHPL-GHILATGSNDNNTKFW 416
Score = 126 (49.4 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 32/129 (24%), Positives = 60/129 (46%)
Query: 315 LVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSD-VNVIS 373
L H +++ L+W+ E+ +L S ++ W + N + +AH + + ++
Sbjct: 171 LQAHDSAIRALKWASNEQWLL-SADQGGYVKYWQPNMNNAH-----MFSAHKDEAIRGLA 224
Query: 374 WNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGAD 433
+ T+ + DDG VWD R+ + + H A V ++WHPT+ A+G D
Sbjct: 225 FAPTDVKFATASDDGTARVWDFARY---TEERVLRGHGAEVRCIDWHPTKG-LIATGSRD 280
Query: 434 DQ--IALWD 440
Q + +WD
Sbjct: 281 TQQPVKIWD 289
Score = 102 (41.0 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 37/170 (21%), Positives = 72/170 (42%)
Query: 327 WSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGD 386
WSP KR++ C +W+ N + T+ AH S + + W E ++S
Sbjct: 141 WSPEGKRLITGCQTG-EFTLWNGTAFNFE----TILQAHDSAIRALKWASNEQWLLSADQ 195
Query: 387 DGCIHVWDLRRFKKGSSVATFK-HHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVER 445
G + W ++ F H + + + PT+ FA+ D +WD A
Sbjct: 196 GGYVKYWQPNM----NNAHMFSAHKDEAIRGLAFAPTDVK-FATASDDGTARVWDFARYT 250
Query: 446 DSEIEQRE-AELKDL---PSQLLFIHLGQKEIKE--LHWHPQLPGTIIST 489
+ + + AE++ + P++ L I G ++ ++ W P+ G+ ++T
Sbjct: 251 EERVLRGHGAEVRCIDWHPTKGL-IATGSRDTQQPVKIWDPK-SGSCLAT 298
Score = 77 (32.2 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 19/70 (27%), Positives = 31/70 (44%)
Query: 470 QKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGT 529
+KE+ L WHP G +S G ++ + L H + I + WHP G
Sbjct: 345 KKEVISLAWHPIHEGLFVSGGGDGSIVYWMVDGEKEIGLLEHAHDQAIWSMKWHPL--GH 402
Query: 530 IISTANSGFN 539
I++T ++ N
Sbjct: 403 ILATGSNDNN 412
Score = 49 (22.3 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 9/28 (32%), Positives = 14/28 (50%)
Query: 514 QKEIKELHWHPQLPGTIISTANSGFNIF 541
+KE+ L WHP G +S G ++
Sbjct: 345 KKEVISLAWHPIHEGLFVSGGGDGSIVY 372
Score = 46 (21.3 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 22/113 (19%), Positives = 41/113 (36%)
Query: 651 SFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWT---PREAGA---------WSVYLYT 698
++ H E ++ W G+ +G +I W +E G WS+ +
Sbjct: 340 TYRAHKKEVISLAWHPIHEGLFVSGGGDGSIVYWMVDGEKEIGLLEHAHDQAIWSMKWHP 399
Query: 699 NRFG-VLATGDCKRNIHIWTPREAG-----AWQVDQKPLVGHTNSVEDLQWSP 745
G +LATG N W G + + ++GH + + + +P
Sbjct: 400 --LGHILATGSNDNNTKFWARNRPGDTVEDIFGLSNTNMIGHLDKEREPRMAP 450
>UNIPROTKB|Q9NVX2 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9606
"Homo sapiens" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602
OrthoDB:EOG4BCDMS EMBL:AK001320 EMBL:AB209111 EMBL:AC022916
EMBL:BC002884 EMBL:BC012075 EMBL:AJ005257 IPI:IPI00018196
IPI:IPI00556116 RefSeq:NP_001014445.1 RefSeq:NP_060566.2
UniGene:Hs.85570 ProteinModelPortal:Q9NVX2 SMR:Q9NVX2 IntAct:Q9NVX2
MINT:MINT-1474299 STRING:Q9NVX2 PhosphoSite:Q9NVX2 DMDM:296439488
SWISS-2DPAGE:Q9NVX2 PaxDb:Q9NVX2 PRIDE:Q9NVX2
Ensembl:ENST00000360831 Ensembl:ENST00000442241 GeneID:54475
KEGG:hsa:54475 UCSC:uc002hiy.1 UCSC:uc002hiz.1
GeneCards:GC17M033458 HGNC:HGNC:19889 HPA:HPA018807
neXtProt:NX_Q9NVX2 PharmGKB:PA142671263 GenomeRNAi:54475
NextBio:56780 ArrayExpress:Q9NVX2 Bgee:Q9NVX2 CleanEx:HS_NLE1
Genevestigator:Q9NVX2 GermOnline:ENSG00000073536 Uniprot:Q9NVX2
Length = 485
Score = 189 (71.6 bits), Expect = 7.4e-11, Sum P(2) = 7.4e-11
Identities = 50/158 (31%), Positives = 77/158 (48%)
Query: 285 PGVLATGDCKRNIHIWTPREAGAWQVDQKPLV---GHTNSVEDLQWSPGEKRVLASCSVD 341
P L +G + +W+P E D+KPL GH + + +SP + R++AS S D
Sbjct: 341 PERLVSGSDDFTLFLWSPAE------DKKPLTRMTGHQALINQVLFSP-DSRIVASASFD 393
Query: 342 LSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKG 401
SI++WD R T + +L H + V I+W+ L+VSG D + VWD++ K
Sbjct: 394 KSIKLWDGR---TGKYLASL-RGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLA 449
Query: 402 SSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALW 439
+ H V V+W P + ASGG D + +W
Sbjct: 450 MDLPG---HADEVYAVDWSP-DGQRVASGGKDKCLRIW 483
Score = 144 (55.7 bits), Expect = 5.3e-09, Sum P(3) = 5.3e-09
Identities = 53/159 (33%), Positives = 69/159 (43%)
Query: 264 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRN-IHIWTPREAGAWQVDQKPLVGHTNSV 322
P F+ GH ++ WS + LA+G CK I +W P G QV + L GH+ +
Sbjct: 148 PHFTCKGHRHWVLSISWSP-DGRKLASG-CKNGQILLWDP-STGK-QVG-RTLAGHSKWI 202
Query: 323 EDLQWSP----GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTE 378
L W P E R +AS S D S+RIWDT C L HT V + W +
Sbjct: 203 TGLSWEPLHANPECRYVASSSKDGSVRIWDT---TAGRCERIL-TGHTQSVTCLRWGG-D 257
Query: 379 PLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTV 417
L+ S D I VW R G T + H V T+
Sbjct: 258 GLLYSASQDRTIKVW---RAHDGVLCRTLQGHGHWVNTM 293
Score = 137 (53.3 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 30/112 (26%), Positives = 55/112 (49%)
Query: 282 STEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVD 341
S + ++A+ ++I +W R G + L GH +V + WS + R+L S S D
Sbjct: 381 SPDSRIVASASFDKSIKLWDGR-TGKYLAS---LRGHVAAVYQIAWS-ADSRLLVSGSSD 435
Query: 342 LSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVW 393
++++WD + + + LP H +V + W+ + SGG D C+ +W
Sbjct: 436 STLKVWD---VKAQKLAMDLPG-HADEVYAVDWSPDGQRVASGGKDKCLRIW 483
Score = 128 (50.1 bits), Expect = 2.9e-07, Sum P(3) = 2.9e-07
Identities = 42/140 (30%), Positives = 63/140 (45%)
Query: 315 LVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISW 374
L GH+ +V + +SP K LAS S D ++R WD ++T++ T H V ISW
Sbjct: 110 LEGHSEAVISVAFSPTGK-YLASGSGDTTVRFWD---LSTETPHFTC-KGHRHWVLSISW 164
Query: 375 NRTEPLIVSGGDDGCIHVWDLRRFKKGSSVA-TFKHHTAPVTTVEWHPTESST----FAS 429
+ + SG +G I +WD G V T H+ +T + W P ++ AS
Sbjct: 165 SPDGRKLASGCKNGQILLWDP---STGKQVGRTLAGHSKWITGLSWEPLHANPECRYVAS 221
Query: 430 GGADDQIALWDLAVERDSEI 449
D + +WD R I
Sbjct: 222 SSKDGSVRIWDTTAGRCERI 241
Score = 70 (29.7 bits), Expect = 5.3e-09, Sum P(3) = 5.3e-09
Identities = 19/62 (30%), Positives = 33/62 (53%)
Query: 704 LATGDCKRNIHIWTPREAGAWQVDQKPLV---GHTNSVEDLQWSPGEKRVLASCSVDRSN 760
L +G + +W+P E D+KPL GH + + +SP + R++AS S D+S
Sbjct: 344 LVSGSDDFTLFLWSPAE------DKKPLTRMTGHQALINQVLFSP-DSRIVASASFDKSI 396
Query: 761 RI 762
++
Sbjct: 397 KL 398
Score = 62 (26.9 bits), Expect = 3.4e-08, Sum P(3) = 3.4e-08
Identities = 20/63 (31%), Positives = 30/63 (47%)
Query: 703 VLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRI 762
+L +G + +W + A +D L GH + V + WSP +RV AS D+ RI
Sbjct: 428 LLVSGSSDSTLKVWDVK-AQKLAMD---LPGHADEVYAVDWSPDGQRV-ASGGKDKCLRI 482
Query: 763 GAR 765
R
Sbjct: 483 WRR 485
Score = 56 (24.8 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 16/60 (26%), Positives = 30/60 (50%)
Query: 703 VLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRI 762
++A+ ++I +W R G + L GH +V + WS + R+L S S D + ++
Sbjct: 386 IVASASFDKSIKLWDGR-TGKYLAS---LRGHVAAVYQIAWS-ADSRLLVSGSSDSTLKV 440
Score = 53 (23.7 bits), Expect = 2.7e-07, Sum P(3) = 2.7e-07
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 654 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIW 684
GH E +A+DWS V A+G + + IW
Sbjct: 454 GHADEVYAVDWSPDGQRV-ASGGKDKCLRIW 483
Score = 42 (19.8 bits), Expect = 5.3e-09, Sum P(3) = 5.3e-09
Identities = 10/26 (38%), Positives = 17/26 (65%)
Query: 617 DLKTALQTVDDPFQLAEHNKKRGKGP 642
DL+ +LQ + + L+ +N RG+GP
Sbjct: 317 DLQGSLQELKER-ALSRYNLVRGQGP 341
Score = 41 (19.5 bits), Expect = 7.4e-11, Sum P(2) = 7.4e-11
Identities = 16/65 (24%), Positives = 28/65 (43%)
Query: 171 SFSGHLTEGFAMDW----SSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSA 226
+ +GH + W ++ E +A+ ++ IW AG + + L GHT S
Sbjct: 194 TLAGHSKWITGLSWEPLHANPECRYVASSSKDGSVRIWDTT-AGRCE---RILTGHTQSV 249
Query: 227 EDLQW 231
L+W
Sbjct: 250 TCLRW 254
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 174 (66.3 bits), Expect = 7.6e-11, Sum P(2) = 7.6e-11
Identities = 58/206 (28%), Positives = 101/206 (49%)
Query: 252 KKRGKGPGIPTPP-LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQV 310
+KR IP PP ++ SGH + + + V+ + I +W E G ++
Sbjct: 87 QKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVF-SVMVSASEDATIKVWD-YETGDFE- 143
Query: 311 DQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVN 370
+ L GHT+SV+D+ + K +LASCS D++I++WD + C+ T+ + H +V+
Sbjct: 144 --RTLKGHTDSVQDISFDHTGK-LLASCSADMTIKLWDFQGFE---CIRTM-HGHDHNVS 196
Query: 371 VISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASG 430
++ IVS D I +W+++ G V TF H V V P + T +
Sbjct: 197 SVAIMPNGDHIVSASRDKTIKMWEVQT---GYCVKTFTGHREWVRMVR--PNQDGTLIAS 251
Query: 431 GADDQ-IALWDLAVERDSEIEQREAE 455
++DQ + +W +A ++ + E RE E
Sbjct: 252 CSNDQTVRVWVVAT-KECKAELREHE 276
Score = 147 (56.8 bits), Expect = 6.8e-07, P = 6.8e-07
Identities = 40/116 (34%), Positives = 61/116 (52%)
Query: 282 STEPG-VLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSV 340
S +PG L +G + I +W G + LVGH N V + + G K +L SC+
Sbjct: 304 SGKPGPFLLSGSRDKTIKMWDI-STGMCLMT---LVGHDNWVRGVLFHSGGKFIL-SCAD 358
Query: 341 DLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLR 396
D ++R+WD + K CM TL NAH V + +++T P +V+G D + VW+ R
Sbjct: 359 DKTLRVWDFK---NKRCMKTL-NAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 126 (49.4 bits), Expect = 0.00014, P = 0.00014
Identities = 44/158 (27%), Positives = 72/158 (45%)
Query: 287 VLATGDCKRNI--HIWTPREAGAWQVDQK--PLVGHTNSVEDLQWSPGEKRVLASCSVDL 342
V+AT +CK + H E +W + + T S PG L S S D
Sbjct: 262 VVATKECKAELREHEHVV-ECISWAPESSYSTISEATGSETKKSGKPGP--FLLSGSRDK 318
Query: 343 SIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGS 402
+I++WD I+T C++TL H + V + ++ I+S DD + VWD FK
Sbjct: 319 TIKMWD---ISTGMCLMTLVG-HDNWVRGVLFHSGGKFILSCADDKTLRVWD---FKNKR 371
Query: 403 SVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWD 440
+ T H VT++++H T + +G D + +W+
Sbjct: 372 CMKTLNAHEHFVTSLDFHKT-APYVVTGSVDQTVKVWE 408
Score = 54 (24.1 bits), Expect = 7.6e-11, Sum P(2) = 7.6e-11
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 731 LVGHTNSVEDLQWSPGEKRVLASCSVDRSNRI 762
LVGH N V + + G K +L SC+ D++ R+
Sbjct: 334 LVGHDNWVRGVLFHSGGKFIL-SCADDKTLRV 364
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 179 (68.1 bits), Expect = 8.0e-11, P = 8.0e-11
Identities = 53/175 (30%), Positives = 81/175 (46%)
Query: 267 SFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQ 326
+ SGH + WSS + +L + + + IW K L GH+N V
Sbjct: 56 TISGHKLGISDVAWSS-DSNLLVSASDDKTLKIWDVSSGKCL----KTLKGHSNYVFCCN 110
Query: 327 WSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGD 386
++P + ++ S S D S+RIWD + T C+ TLP AH+ V+ + +NR LIVS
Sbjct: 111 FNP-QSNLIVSGSFDESVRIWD---VKTGKCLKTLP-AHSDPVSAVHFNRDGSLIVSSSY 165
Query: 387 DGCIHVWDLRRFKKGSSVATF-KHHTAPVTTVEWHPTESSTFASGGADDQIALWD 440
DG +WD G + T PV+ V++ P A+ D+ + LWD
Sbjct: 166 DGLCRIWDTA---SGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT-LDNTLKLWD 216
Score = 153 (58.9 bits), Expect = 7.4e-08, P = 7.4e-08
Identities = 38/128 (29%), Positives = 65/128 (50%)
Query: 315 LVGHTNSVEDLQWSP-GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVIS 373
L GHT +V +++SP GE LAS S D I+IW + + + H ++ ++
Sbjct: 15 LAGHTKAVSSVKFSPNGEW--LASSSADKLIKIWGAYDGKFEKTI----SGHKLGISDVA 68
Query: 374 WNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGAD 433
W+ L+VS DD + +WD+ G + T K H+ V ++P +S+ SG D
Sbjct: 69 WSSDSNLLVSASDDKTLKIWDV---SSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFD 124
Query: 434 DQIALWDL 441
+ + +WD+
Sbjct: 125 ESVRIWDV 132
Score = 118 (46.6 bits), Expect = 0.00061, P = 0.00061
Identities = 51/231 (22%), Positives = 94/231 (40%)
Query: 170 FSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVD-QKPLGGHTNSAED 228
F+ +GH T+ + S LA+ + I IW GA+ +K + GH D
Sbjct: 13 FTLAGH-TKAVSSVKFSPNGEWLASSSADKLIKIW-----GAYDGKFEKTISGHKLGISD 66
Query: 229 LQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVL 288
+ WS L + D L + GK L + GH F +++ + ++
Sbjct: 67 VAWSSDSNLLVSASDDKTLKIWDVSSGKC-------LKTLKGHSNYVFCCNFNP-QSNLI 118
Query: 289 ATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWD 348
+G ++ IW + K L H++ V + ++ + ++ S S D RIWD
Sbjct: 119 VSGSFDESVRIWDVKTGKCL----KTLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWD 173
Query: 349 TRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFK 399
T + C+ TL + V+ + ++ I++ D + +WD + K
Sbjct: 174 TA---SGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGK 221
>DICTYBASE|DDB_G0275045 [details] [associations]
symbol:gpbB "Guanine nucleotide-binding protein
subunit beta-like protein" species:44689 "Dictyostelium discoideum"
[GO:0045335 "phagocytic vesicle" evidence=IDA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0275045 GO:GO:0045335
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR EMBL:AAFI02000013 KO:K14753 OMA:IRVWQVM
EMBL:U27537 RefSeq:XP_643839.1 ProteinModelPortal:P46800 SMR:P46800
IntAct:P46800 STRING:P46800 SWISS-2DPAGE:P46800 PRIDE:P46800
EnsemblProtists:DDB0185122 GeneID:8619886 KEGG:ddi:DDB_G0275045
Uniprot:P46800
Length = 329
Score = 180 (68.4 bits), Expect = 8.1e-11, P = 8.1e-11
Identities = 54/179 (30%), Positives = 81/179 (45%)
Query: 267 SFSGHLTEGFAMDWSSTEPGVLA-TGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDL 325
S GH F D + G A +G + +W + V + GHT V +
Sbjct: 65 SLKGH--SHFVQDVVISHDGQFALSGSWDNTLRLWDITKG----VSTRLFKGHTQDVMSV 118
Query: 326 QWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTL--PNAHTSDVNVISWNRTEPLIVS 383
+S +++++ S D +I++W+T C TL P AH V+ I ++ P IVS
Sbjct: 119 AFSSDNRQIISG-SRDATIKVWNT----LGECKFTLEGPEAHQDWVSCIRFSPNTPTIVS 173
Query: 384 GGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442
G D + +WD++ FK T HT V TV P + S ASGG D LW+L+
Sbjct: 174 GSWDNKVKIWDIKSFKCNH---TLTDHTGYVNTVTISP-DGSLCASGGKDTFACLWELS 228
Score = 148 (57.2 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 49/190 (25%), Positives = 86/190 (45%)
Query: 256 KGPGIPTPPLFSFSGHLTEGF--AMDWSSTEPGVLATGDCKRNIHIW--TPREAGAWQVD 311
K P + + S GH GF ++ S P + + + + +W TP +A +
Sbjct: 5 KAPQVTYLEVGSLVGH--NGFVTSIAVSPENPDTIISSSRDKTVMVWQLTPTDATSPGKA 62
Query: 312 QKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNV 371
+ L GH++ V+D+ S + L+ S D ++R+WD TK L HT DV
Sbjct: 63 HRSLKGHSHFVQDVVISHDGQFALSG-SWDNTLRLWDI----TKGVSTRLFKGHTQDVMS 117
Query: 372 ISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGG 431
++++ I+SG D I VW+ K + H V+ + + P + T SG
Sbjct: 118 VAFSSDNRQIISGSRDATIKVWNTLGECKFTLEGPEAHQDW-VSCIRFSPN-TPTIVSGS 175
Query: 432 ADDQIALWDL 441
D+++ +WD+
Sbjct: 176 WDNKVKIWDI 185
Score = 126 (49.4 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 42/178 (23%), Positives = 79/178 (44%)
Query: 268 FSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQW 327
F GH + ++ +SS +++ G I +W G + + H + V +++
Sbjct: 108 FKGHTQDVMSVAFSSDNRQIIS-GSRDATIKVWNT--LGECKFTLEGPEAHQDWVSCIRF 164
Query: 328 SPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDD 387
SP +++ S D ++IWD I + C TL + HT VN ++ + L SGG D
Sbjct: 165 SPNTPTIVSG-SWDNKVKIWD---IKSFKCNHTLTD-HTGYVNTVTISPDGSLCASGGKD 219
Query: 388 GCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVER 445
+W+L G + + + + + P + + S DD+I +WDL ++
Sbjct: 220 TFACLWEL---SSGKPLYKLEARNT-INALAFSPNKY--WLSAATDDKIIIWDLLTKQ 271
Score = 116 (45.9 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 41/154 (26%), Positives = 65/154 (42%)
Query: 315 LVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWD---TRVINTKSCMLTLPNAHTSDVNV 371
LVGH V + SP + S S D ++ +W T + +L H+ V
Sbjct: 17 LVGHNGFVTSIAVSPENPDTIISSSRDKTVMVWQLTPTDATSPGKAHRSL-KGHSHFVQD 75
Query: 372 ISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGG 431
+ + +SG D + +WD+ KG S FK HT V +V + +++ SG
Sbjct: 76 VVISHDGQFALSGSWDNTLRLWDIT---KGVSTRLFKGHTQDVMSVAFS-SDNRQIISGS 131
Query: 432 ADDQIALWDLAVERDSEIEQREAELKDLPSQLLF 465
D I +W+ E +E EA +D S + F
Sbjct: 132 RDATIKVWNTLGECKFTLEGPEAH-QDWVSCIRF 164
Score = 51 (23.0 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 586 HRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKT 620
H+ ++ +R T ++G W KV IWD+K+
Sbjct: 155 HQDWVSCIRFSPNTPTIVSGSWDN--KVKIWDIKS 187
>POMBASE|SPCC1672.10 [details] [associations]
symbol:mis16 "kinetochore protein Mis16" species:4896
"Schizosaccharomyces pombe" [GO:0000070 "mitotic sister chromatid
segregation" evidence=IMP] [GO:0000778 "condensed nuclear
chromosome kinetochore" evidence=IDA] [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006995 "cellular response to nitrogen starvation"
evidence=IMP] [GO:0016575 "histone deacetylation" evidence=IMP]
[GO:0031055 "chromatin remodeling at centromere" evidence=IMP]
[GO:0031066 "regulation of histone deacetylation at centromere"
evidence=IMP] [GO:0031511 "Mis6-Sim4 complex" evidence=TAS]
[GO:0034501 "protein localization to kinetochore" evidence=IMP]
[GO:0051382 "kinetochore assembly" evidence=TAS] [GO:0070317
"negative regulation of G0 to G1 transition" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPCC1672.10 GO:GO:0005829 GO:GO:0070317 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0006281 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000790 GO:GO:0000070
GO:GO:0000778 GO:GO:0034501 GO:GO:0006995 GO:GO:0051382
GO:GO:0016575 KO:K10752 InterPro:IPR022052 Pfam:PF12265 PIR:T41054
RefSeq:NP_587881.1 ProteinModelPortal:O94244 SMR:O94244
IntAct:O94244 STRING:O94244 PRIDE:O94244 EnsemblFungi:SPCC1672.10.1
GeneID:2539214 KEGG:spo:SPCC1672.10 HOGENOM:HOG000160330
OMA:NSCIIAT OrthoDB:EOG412QFD NextBio:20800384 GO:GO:0031511
GO:GO:0031055 GO:GO:0031066 Uniprot:O94244
Length = 430
Score = 183 (69.5 bits), Expect = 8.2e-11, P = 8.2e-11
Identities = 64/248 (25%), Positives = 100/248 (40%)
Query: 168 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQK---PLGG--- 221
P GH EGF + W+ PG LATG + I +W + + K P+
Sbjct: 174 PQAVLKGHTAEGFGLCWNPNLPGNLATGAEDQVICLWDVQTQSFTSSETKVISPIAKYHR 233
Query: 222 HTNSAEDLQWSDLKTAL-QTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDW 280
HT+ D+Q+ AL +V D L H+ + P P + A++
Sbjct: 234 HTDIVNDVQFHPQHEALLASVSDDCTLQIHDTRLN--PEEEAPKVIQAHSKAINAVAIN- 290
Query: 281 SSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSV 340
+LAT + + +W R +Q L GH + V L+WSP ++ +LAS S
Sbjct: 291 -PFNDYLLATASADKTVALWDLRNP--YQ-RLHTLEGHEDEVYGLEWSPHDEPILASSST 346
Query: 341 DLSIRIWDTRVINTKSC----------MLTLPNAHTSDVNVISWNRTEPLIVSG-GDDGC 389
D + IWD I + +L + HT+ ++ SW E +V DD
Sbjct: 347 DRRVCIWDLEKIGEEQTPEDAEDGSPELLFMHGGHTNRISEFSWCPNERWVVGSLADDNI 406
Query: 390 IHVWDLRR 397
+ +W R
Sbjct: 407 LQIWSPSR 414
Score = 142 (55.0 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 83/357 (23%), Positives = 140/357 (39%)
Query: 212 WQVDQKPLGGHTNSAEDLQWSDLKTA-LQTVD-DPFQLAEHNKKRGKGPGIPTPPLFSFS 269
+ + + LG HT S D + + + L D D + +R + G T +
Sbjct: 70 YSIQRLILGTHT-SGNDQNYLQIASVQLPNFDEDTTEFTPSTIRRAQATGSYTIEISQKI 128
Query: 270 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIW--TPREA--GAWQVDQKPLVGHTNSVEDL 325
H + + +P ++AT N +I+ T +A + Q L GHT L
Sbjct: 129 PHDGDVNRARYMPQKPEIIATMGEGGNAYIFDTTCHDALTTGEALPQAVLKGHTAEGFGL 188
Query: 326 QWSPGEKRVLASCSVDLSIRIWD--TRVINTKSCMLTLPNA----HTSDVNVISWN-RTE 378
W+P LA+ + D I +WD T+ + + P A HT VN + ++ + E
Sbjct: 189 CWNPNLPGNLATGAEDQVICLWDVQTQSFTSSETKVISPIAKYHRHTDIVNDVQFHPQHE 248
Query: 379 PLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIAL 438
L+ S DD + + D R + + + H+ + V +P A+ AD +AL
Sbjct: 249 ALLASVSDDCTLQIHDTRLNPEEEAPKVIQAHSKAINAVAINPFNDYLLATASADKTVAL 308
Query: 439 WDLA--VERDSEIEQREAELKDL---PSQLLFIHLGQKEIKELHWHPQLPGTIISTANSG 493
WDL +R +E E E+ L P + + + W + G + ++
Sbjct: 309 WDLRNPYQRLHTLEGHEDEVYGLEWSPHDEPILASSSTDRRVCIWDLEKIGEEQTPEDA- 367
Query: 494 FNIFRTISDLPSQLLFIHLGQ-KEIKELHWHPQLPGTIISTANSGFNIFRTISMSNL 549
D +LLF+H G I E W P + S A+ NI + S S +
Sbjct: 368 -------EDGSPELLFMHGGHTNRISEFSWCPNERWVVGSLADD--NILQIWSPSRV 415
>DICTYBASE|DDB_G0295793 [details] [associations]
symbol:DDB_G0295793 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0295793 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:AAFI02000207 KO:K15542 RefSeq:XP_002649088.2
ProteinModelPortal:C7G084 EnsemblProtists:DDB0252613 GeneID:8629212
KEGG:ddi:DDB_G0295793 OMA:APAQYPQ ProtClustDB:CLSZ2735765
Uniprot:C7G084
Length = 657
Score = 186 (70.5 bits), Expect = 8.8e-11, P = 8.8e-11
Identities = 61/205 (29%), Positives = 95/205 (46%)
Query: 280 WSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNS-VEDLQWSPGEKRVLASC 338
WS E +++ GD NI W P K H S + L +SP + + LASC
Sbjct: 175 WSHNEDWMVS-GDDSGNIKYWQPNMNNV-----KIFKAHEQSKIRGLSFSPTDLK-LASC 227
Query: 339 SVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRF 398
+ D I+IWD T+ L H DV +SW+ + LIVSGG D I +WD
Sbjct: 228 ADDKIIKIWDFARC-TEDNQLV---GHGWDVKCVSWHPQKSLIVSGGKDNNIKIWDA--- 280
Query: 399 KKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSE-IEQREAELK 457
K ++ T H + V+ VEW+ + S +D + ++D+ ++ + + E+
Sbjct: 281 KSSQNITTLHGHKSTVSKVEWNQN-GNWIVSASSDQLLKVFDIRTMKEMQTFKGHGKEVT 339
Query: 458 DL---P-SQLLFIHLGQKEIKELHW 478
L P + LF+ G K+ K L+W
Sbjct: 340 ALALHPYHEDLFVS-GDKDGKILYW 363
Score = 125 (49.1 bits), Expect = 0.00036, P = 0.00036
Identities = 44/171 (25%), Positives = 76/171 (44%)
Query: 270 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSP 329
GH + + W + ++ +G NI IW +A + Q + L GH ++V ++W+
Sbjct: 249 GHGWDVKCVSWHP-QKSLIVSGGKDNNIKIW---DAKSSQ-NITTLHGHKSTVSKVEWNQ 303
Query: 330 GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRT-EPLIVSGGDDG 388
++ S S D ++++D R + M T H +V ++ + E L VSG DG
Sbjct: 304 NGNWIV-SASSDQLLKVFDIRTMKE---MQTF-KGHGKEVTALALHPYHEDLFVSGDKDG 358
Query: 389 CIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALW 439
I W + + + + + H A V ++ WHP ASG D W
Sbjct: 359 KILYWIVGNPEPQAEIHSA--HDADVWSLSWHPI-GHILASGSNDHTTKFW 406
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 178 (67.7 bits), Expect = 9.7e-11, Sum P(2) = 9.7e-11
Identities = 54/181 (29%), Positives = 87/181 (48%)
Query: 264 PLFSFSGHLTEGFA-MDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSV 322
P+ F+GH G + + +SS +++ D K + +W E G+ K L+GHTN
Sbjct: 63 PVQEFTGH-ENGISDVAFSSDARFIVSASDDK-TLKLWDV-ETGSLI---KTLIGHTNYA 116
Query: 323 EDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIV 382
+ ++P + ++ S S D ++RIWD + T C+ LP AH+ V + +NR LIV
Sbjct: 117 FCVNFNP-QSNMIVSGSFDETVRIWD---VTTGKCLKVLP-AHSDPVTAVDFNRDGSLIV 171
Query: 383 SGGDDGCIHVWDLRRFKKGSSVATF-KHHTAPVTTVEWHPTESSTFASGGADDQIALWDL 441
S DG +WD G V T PV+ V + P G D+ + LW++
Sbjct: 172 SSSYDGLCRIWDSGT---GHCVKTLIDDENPPVSFVRFSPNGKFILV-GTLDNTLRLWNI 227
Query: 442 A 442
+
Sbjct: 228 S 228
Score = 142 (55.0 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 39/136 (28%), Positives = 69/136 (50%)
Query: 310 VDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLP----NAH 365
V + L H +V +++S + R+LAS S D +IR T INT + + P H
Sbjct: 15 VHSQTLTSHNRAVSSVKFS-SDGRLLASASADKTIR---TYTINTINDPIAEPVQEFTGH 70
Query: 366 TSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESS 425
+ ++ ++++ IVS DD + +WD+ + GS + T HT V ++P +S+
Sbjct: 71 ENGISDVAFSSDARFIVSASDDKTLKLWDV---ETGSLIKTLIGHTNYAFCVNFNP-QSN 126
Query: 426 TFASGGADDQIALWDL 441
SG D+ + +WD+
Sbjct: 127 MIVSGSFDETVRIWDV 142
Score = 134 (52.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 39/131 (29%), Positives = 66/131 (50%)
Query: 313 KPLVGHTNS-VEDLQWSPGEKRVLASCSVDLSIRIWD---TRVINTKSCMLTLPNAHTSD 368
K L+ N V +++SP K +L ++D ++R+W+ + + T + + +S
Sbjct: 191 KTLIDDENPPVSFVRFSPNGKFILVG-TLDNTLRLWNISSAKFLKTYTGHVNAQYCISSA 249
Query: 369 VNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFA 428
+V + R IVSG +D C+H+W+L KK + + HT V V HPTE+ A
Sbjct: 250 FSVTNGKR----IVSGSEDNCVHMWELNS-KK--LLQKLEGHTETVMNVACHPTEN-LIA 301
Query: 429 SGGADDQIALW 439
SG D + +W
Sbjct: 302 SGSLDKTVRIW 312
Score = 42 (19.8 bits), Expect = 9.7e-11, Sum P(2) = 9.7e-11
Identities = 10/40 (25%), Positives = 18/40 (45%)
Query: 649 LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPRE 688
L GH + TE ++A+G + + IWT ++
Sbjct: 278 LQKLEGHTETVMNVACHPTE-NLIASGSLDKTVRIWTQKK 316
Score = 39 (18.8 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 5/18 (27%), Positives = 12/18 (66%)
Query: 703 VLATGDCKRNIHIWTPRE 720
++A+G + + IWT ++
Sbjct: 299 LIASGSLDKTVRIWTQKK 316
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 179 (68.1 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 53/175 (30%), Positives = 81/175 (46%)
Query: 267 SFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQ 326
+ SGH + WSS + +L + + + IW K L GH+N V
Sbjct: 82 TISGHKLGISDVAWSS-DSNLLVSASDDKTLKIWDVSSGKCL----KTLKGHSNYVFCCN 136
Query: 327 WSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGD 386
++P + ++ S S D S+RIWD + T C+ TLP AH+ V+ + +NR LIVS
Sbjct: 137 FNP-QSNLIVSGSFDESVRIWD---VKTGKCLKTLP-AHSDPVSAVHFNRDGSLIVSSSY 191
Query: 387 DGCIHVWDLRRFKKGSSVATF-KHHTAPVTTVEWHPTESSTFASGGADDQIALWD 440
DG +WD G + T PV+ V++ P A+ D+ + LWD
Sbjct: 192 DGLCRIWDTA---SGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT-LDNTLKLWD 242
Score = 153 (58.9 bits), Expect = 9.4e-08, P = 9.4e-08
Identities = 38/128 (29%), Positives = 65/128 (50%)
Query: 315 LVGHTNSVEDLQWSP-GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVIS 373
L GHT +V +++SP GE LAS S D I+IW + + + H ++ ++
Sbjct: 41 LAGHTKAVSSVKFSPNGEW--LASSSADKLIKIWGAYDGKFEKTI----SGHKLGISDVA 94
Query: 374 WNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGAD 433
W+ L+VS DD + +WD+ G + T K H+ V ++P +S+ SG D
Sbjct: 95 WSSDSNLLVSASDDKTLKIWDV---SSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFD 150
Query: 434 DQIALWDL 441
+ + +WD+
Sbjct: 151 ESVRIWDV 158
Score = 120 (47.3 bits), Expect = 0.00043, P = 0.00043
Identities = 55/247 (22%), Positives = 99/247 (40%)
Query: 155 NKKRGKGPGIPTPPL-FSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQ 213
N + P P L F+ +GH T+ + S LA+ + I IW GA+
Sbjct: 23 NNQSKPAPVKPNYTLKFTLAGH-TKAVSSVKFSPNGEWLASSSADKLIKIW-----GAYD 76
Query: 214 VD-QKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHL 272
+K + GH D+ WS L + D L + GK L + GH
Sbjct: 77 GKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKC-------LKTLKGHS 129
Query: 273 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEK 332
F +++ + ++ +G ++ IW + K L H++ V + ++ +
Sbjct: 130 NYVFCCNFNP-QSNLIVSGSFDESVRIWDVKTGKCL----KTLPAHSDPVSAVHFNR-DG 183
Query: 333 RVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHV 392
++ S S D RIWDT + C+ TL + V+ + ++ I++ D + +
Sbjct: 184 SLIVSSSYDGLCRIWDTA---SGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 240
Query: 393 WDLRRFK 399
WD + K
Sbjct: 241 WDYSKGK 247
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 179 (68.1 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 53/175 (30%), Positives = 81/175 (46%)
Query: 267 SFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQ 326
+ SGH + WSS + +L + + + IW K L GH+N V
Sbjct: 82 TISGHKLGISDVAWSS-DSNLLVSASDDKTLKIWDVSSGKCL----KTLKGHSNYVFCCN 136
Query: 327 WSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGD 386
++P + ++ S S D S+RIWD + T C+ TLP AH+ V+ + +NR LIVS
Sbjct: 137 FNP-QSNLIVSGSFDESVRIWD---VKTGKCLKTLP-AHSDPVSAVHFNRDGSLIVSSSY 191
Query: 387 DGCIHVWDLRRFKKGSSVATF-KHHTAPVTTVEWHPTESSTFASGGADDQIALWD 440
DG +WD G + T PV+ V++ P A+ D+ + LWD
Sbjct: 192 DGLCRIWDTA---SGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT-LDNTLKLWD 242
Score = 153 (58.9 bits), Expect = 9.4e-08, P = 9.4e-08
Identities = 38/128 (29%), Positives = 65/128 (50%)
Query: 315 LVGHTNSVEDLQWSP-GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVIS 373
L GHT +V +++SP GE LAS S D I+IW + + + H ++ ++
Sbjct: 41 LAGHTKAVSSVKFSPNGEW--LASSSADKLIKIWGAYDGKFEKTI----SGHKLGISDVA 94
Query: 374 WNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGAD 433
W+ L+VS DD + +WD+ G + T K H+ V ++P +S+ SG D
Sbjct: 95 WSSDSNLLVSASDDKTLKIWDV---SSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFD 150
Query: 434 DQIALWDL 441
+ + +WD+
Sbjct: 151 ESVRIWDV 158
Score = 118 (46.6 bits), Expect = 0.00072, P = 0.00072
Identities = 51/231 (22%), Positives = 94/231 (40%)
Query: 170 FSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVD-QKPLGGHTNSAED 228
F+ +GH T+ + S LA+ + I IW GA+ +K + GH D
Sbjct: 39 FTLAGH-TKAVSSVKFSPNGEWLASSSADKLIKIW-----GAYDGKFEKTISGHKLGISD 92
Query: 229 LQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVL 288
+ WS L + D L + GK L + GH F +++ + ++
Sbjct: 93 VAWSSDSNLLVSASDDKTLKIWDVSSGKC-------LKTLKGHSNYVFCCNFNP-QSNLI 144
Query: 289 ATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWD 348
+G ++ IW + K L H++ V + ++ + ++ S S D RIWD
Sbjct: 145 VSGSFDESVRIWDVKTGKCL----KTLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWD 199
Query: 349 TRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFK 399
T + C+ TL + V+ + ++ I++ D + +WD + K
Sbjct: 200 TA---SGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGK 247
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 179 (68.1 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 53/175 (30%), Positives = 81/175 (46%)
Query: 267 SFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQ 326
+ SGH + WSS + +L + + + IW K L GH+N V
Sbjct: 82 TISGHKLGISDVAWSS-DSNLLVSASDDKTLKIWDVSSGKCL----KTLKGHSNYVFCCN 136
Query: 327 WSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGD 386
++P + ++ S S D S+RIWD + T C+ TLP AH+ V+ + +NR LIVS
Sbjct: 137 FNP-QSNLIVSGSFDESVRIWD---VKTGKCLKTLP-AHSDPVSAVHFNRDGSLIVSSSY 191
Query: 387 DGCIHVWDLRRFKKGSSVATF-KHHTAPVTTVEWHPTESSTFASGGADDQIALWD 440
DG +WD G + T PV+ V++ P A+ D+ + LWD
Sbjct: 192 DGLCRIWDTA---SGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT-LDNTLKLWD 242
Score = 153 (58.9 bits), Expect = 9.4e-08, P = 9.4e-08
Identities = 38/128 (29%), Positives = 65/128 (50%)
Query: 315 LVGHTNSVEDLQWSP-GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVIS 373
L GHT +V +++SP GE LAS S D I+IW + + + H ++ ++
Sbjct: 41 LAGHTKAVSSVKFSPNGEW--LASSSADKLIKIWGAYDGKFEKTI----SGHKLGISDVA 94
Query: 374 WNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGAD 433
W+ L+VS DD + +WD+ G + T K H+ V ++P +S+ SG D
Sbjct: 95 WSSDSNLLVSASDDKTLKIWDV---SSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFD 150
Query: 434 DQIALWDL 441
+ + +WD+
Sbjct: 151 ESVRIWDV 158
Score = 118 (46.6 bits), Expect = 0.00072, P = 0.00072
Identities = 51/231 (22%), Positives = 94/231 (40%)
Query: 170 FSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVD-QKPLGGHTNSAED 228
F+ +GH T+ + S LA+ + I IW GA+ +K + GH D
Sbjct: 39 FTLAGH-TKAVSSVKFSPNGEWLASSSADKLIKIW-----GAYDGKFEKTISGHKLGISD 92
Query: 229 LQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVL 288
+ WS L + D L + GK L + GH F +++ + ++
Sbjct: 93 VAWSSDSNLLVSASDDKTLKIWDVSSGKC-------LKTLKGHSNYVFCCNFNP-QSNLI 144
Query: 289 ATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWD 348
+G ++ IW + K L H++ V + ++ + ++ S S D RIWD
Sbjct: 145 VSGSFDESVRIWDVKTGKCL----KTLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWD 199
Query: 349 TRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFK 399
T + C+ TL + V+ + ++ I++ D + +WD + K
Sbjct: 200 TA---SGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGK 247
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 179 (68.1 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 53/175 (30%), Positives = 81/175 (46%)
Query: 267 SFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQ 326
+ SGH + WSS + +L + + + IW K L GH+N V
Sbjct: 82 TISGHKLGISDVAWSS-DSNLLVSASDDKTLKIWDVSSGKCL----KTLKGHSNYVFCCN 136
Query: 327 WSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGD 386
++P + ++ S S D S+RIWD + T C+ TLP AH+ V+ + +NR LIVS
Sbjct: 137 FNP-QSNLIVSGSFDESVRIWD---VKTGKCLKTLP-AHSDPVSAVHFNRDGSLIVSSSY 191
Query: 387 DGCIHVWDLRRFKKGSSVATF-KHHTAPVTTVEWHPTESSTFASGGADDQIALWD 440
DG +WD G + T PV+ V++ P A+ D+ + LWD
Sbjct: 192 DGLCRIWDTA---SGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT-LDNTLKLWD 242
Score = 153 (58.9 bits), Expect = 9.4e-08, P = 9.4e-08
Identities = 38/128 (29%), Positives = 65/128 (50%)
Query: 315 LVGHTNSVEDLQWSP-GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVIS 373
L GHT +V +++SP GE LAS S D I+IW + + + H ++ ++
Sbjct: 41 LAGHTKAVSSVKFSPNGEW--LASSSADKLIKIWGAYDGKFEKTI----SGHKLGISDVA 94
Query: 374 WNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGAD 433
W+ L+VS DD + +WD+ G + T K H+ V ++P +S+ SG D
Sbjct: 95 WSSDSNLLVSASDDKTLKIWDV---SSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFD 150
Query: 434 DQIALWDL 441
+ + +WD+
Sbjct: 151 ESVRIWDV 158
Score = 118 (46.6 bits), Expect = 0.00072, P = 0.00072
Identities = 51/231 (22%), Positives = 94/231 (40%)
Query: 170 FSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVD-QKPLGGHTNSAED 228
F+ +GH T+ + S LA+ + I IW GA+ +K + GH D
Sbjct: 39 FTLAGH-TKAVSSVKFSPNGEWLASSSADKLIKIW-----GAYDGKFEKTISGHKLGISD 92
Query: 229 LQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVL 288
+ WS L + D L + GK L + GH F +++ + ++
Sbjct: 93 VAWSSDSNLLVSASDDKTLKIWDVSSGKC-------LKTLKGHSNYVFCCNFNP-QSNLI 144
Query: 289 ATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWD 348
+G ++ IW + K L H++ V + ++ + ++ S S D RIWD
Sbjct: 145 VSGSFDESVRIWDVKTGKCL----KTLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWD 199
Query: 349 TRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFK 399
T + C+ TL + V+ + ++ I++ D + +WD + K
Sbjct: 200 TA---SGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGK 247
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 179 (68.1 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 53/175 (30%), Positives = 81/175 (46%)
Query: 267 SFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQ 326
+ SGH + WSS + +L + + + IW K L GH+N V
Sbjct: 82 TISGHKLGISDVAWSS-DSNLLVSASDDKTLKIWDVSSGKCL----KTLKGHSNYVFCCN 136
Query: 327 WSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGD 386
++P + ++ S S D S+RIWD + T C+ TLP AH+ V+ + +NR LIVS
Sbjct: 137 FNP-QSNLIVSGSFDESVRIWD---VKTGKCLKTLP-AHSDPVSAVHFNRDGSLIVSSSY 191
Query: 387 DGCIHVWDLRRFKKGSSVATF-KHHTAPVTTVEWHPTESSTFASGGADDQIALWD 440
DG +WD G + T PV+ V++ P A+ D+ + LWD
Sbjct: 192 DGLCRIWDTA---SGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT-LDNTLKLWD 242
Score = 153 (58.9 bits), Expect = 9.4e-08, P = 9.4e-08
Identities = 38/128 (29%), Positives = 65/128 (50%)
Query: 315 LVGHTNSVEDLQWSP-GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVIS 373
L GHT +V +++SP GE LAS S D I+IW + + + H ++ ++
Sbjct: 41 LAGHTKAVSSVKFSPNGEW--LASSSADKLIKIWGAYDGKFEKTI----SGHKLGISDVA 94
Query: 374 WNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGAD 433
W+ L+VS DD + +WD+ G + T K H+ V ++P +S+ SG D
Sbjct: 95 WSSDSNLLVSASDDKTLKIWDV---SSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFD 150
Query: 434 DQIALWDL 441
+ + +WD+
Sbjct: 151 ESVRIWDV 158
Score = 118 (46.6 bits), Expect = 0.00072, P = 0.00072
Identities = 51/231 (22%), Positives = 94/231 (40%)
Query: 170 FSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVD-QKPLGGHTNSAED 228
F+ +GH T+ + S LA+ + I IW GA+ +K + GH D
Sbjct: 39 FTLAGH-TKAVSSVKFSPNGEWLASSSADKLIKIW-----GAYDGKFEKTISGHKLGISD 92
Query: 229 LQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVL 288
+ WS L + D L + GK L + GH F +++ + ++
Sbjct: 93 VAWSSDSNLLVSASDDKTLKIWDVSSGKC-------LKTLKGHSNYVFCCNFNP-QSNLI 144
Query: 289 ATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWD 348
+G ++ IW + K L H++ V + ++ + ++ S S D RIWD
Sbjct: 145 VSGSFDESVRIWDVKTGKCL----KTLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWD 199
Query: 349 TRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFK 399
T + C+ TL + V+ + ++ I++ D + +WD + K
Sbjct: 200 TA---SGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGK 247
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 179 (68.1 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 53/175 (30%), Positives = 81/175 (46%)
Query: 267 SFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQ 326
+ SGH + WSS + +L + + + IW K L GH+N V
Sbjct: 82 TISGHKLGISDVAWSS-DSNLLVSASDDKTLKIWDVSSGKCL----KTLKGHSNYVFCCN 136
Query: 327 WSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGD 386
++P + ++ S S D S+RIWD + T C+ TLP AH+ V+ + +NR LIVS
Sbjct: 137 FNP-QSNLIVSGSFDESVRIWD---VKTGKCLKTLP-AHSDPVSAVHFNRDGSLIVSSSY 191
Query: 387 DGCIHVWDLRRFKKGSSVATF-KHHTAPVTTVEWHPTESSTFASGGADDQIALWD 440
DG +WD G + T PV+ V++ P A+ D+ + LWD
Sbjct: 192 DGLCRIWDTA---SGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT-LDNTLKLWD 242
Score = 153 (58.9 bits), Expect = 9.4e-08, P = 9.4e-08
Identities = 38/128 (29%), Positives = 65/128 (50%)
Query: 315 LVGHTNSVEDLQWSP-GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVIS 373
L GHT +V +++SP GE LAS S D I+IW + + + H ++ ++
Sbjct: 41 LAGHTKAVSSVKFSPNGEW--LASSSADKLIKIWGAYDGKFEKTI----SGHKLGISDVA 94
Query: 374 WNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGAD 433
W+ L+VS DD + +WD+ G + T K H+ V ++P +S+ SG D
Sbjct: 95 WSSDSNLLVSASDDKTLKIWDV---SSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFD 150
Query: 434 DQIALWDL 441
+ + +WD+
Sbjct: 151 ESVRIWDV 158
Score = 118 (46.6 bits), Expect = 0.00072, P = 0.00072
Identities = 51/231 (22%), Positives = 94/231 (40%)
Query: 170 FSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVD-QKPLGGHTNSAED 228
F+ +GH T+ + S LA+ + I IW GA+ +K + GH D
Sbjct: 39 FTLAGH-TKAVSSVKFSPNGEWLASSSADKLIKIW-----GAYDGKFEKTISGHKLGISD 92
Query: 229 LQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVL 288
+ WS L + D L + GK L + GH F +++ + ++
Sbjct: 93 VAWSSDSNLLVSASDDKTLKIWDVSSGKC-------LKTLKGHSNYVFCCNFNP-QSNLI 144
Query: 289 ATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWD 348
+G ++ IW + K L H++ V + ++ + ++ S S D RIWD
Sbjct: 145 VSGSFDESVRIWDVKTGKCL----KTLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWD 199
Query: 349 TRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFK 399
T + C+ TL + V+ + ++ I++ D + +WD + K
Sbjct: 200 TA---SGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGK 247
>RGD|1308301 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007219
"Notch signaling pathway" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:1308301
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972
Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS
EMBL:BC166567 IPI:IPI00896225 RefSeq:NP_001121006.1
UniGene:Rn.19087 STRING:B2GV82 Ensembl:ENSRNOT00000011320
GeneID:303372 KEGG:rno:303372 NextBio:651216 Genevestigator:B2GV82
Uniprot:B2GV82
Length = 487
Score = 189 (71.6 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 50/158 (31%), Positives = 78/158 (49%)
Query: 285 PGVLATGDCKRNIHIWTPREAGAWQVDQKPLV---GHTNSVEDLQWSPGEKRVLASCSVD 341
P L +G + +W+P E D+KPL GH + + +SP + R++AS S D
Sbjct: 343 PERLVSGSDDFTLFLWSPAE------DKKPLARMTGHQALINQVLFSP-DSRIVASASFD 395
Query: 342 LSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKG 401
SI++WD R T + +L H + V I+W+ L+VSG D + VWD++ K
Sbjct: 396 KSIKLWDGR---TGKYLASL-RGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLT 451
Query: 402 SSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALW 439
+ + H V V+W P + ASGG D + +W
Sbjct: 452 TDLPG---HADEVYAVDWSP-DGQRVASGGKDKCLRIW 485
Score = 144 (55.7 bits), Expect = 6.7e-09, Sum P(2) = 6.7e-09
Identities = 52/159 (32%), Positives = 69/159 (43%)
Query: 264 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRN-IHIWTPREAGAWQVDQKPLVGHTNSV 322
P F+ GH ++ WS + LA+G CK I +W P G QV + L GH+ +
Sbjct: 150 PHFTCKGHRHWVLSISWSP-DGKKLASG-CKNGQILLWDP-STGT-QVG-RTLTGHSKWI 204
Query: 323 EDLQWSP----GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTE 378
L W P E R +AS S D S+R+WDT C L HT V + W +
Sbjct: 205 TGLSWEPLHMNPECRYVASSSKDGSVRVWDT---TAGRCERIL-TGHTQSVTCLRWGG-D 259
Query: 379 PLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTV 417
L+ S D I VW R G T + H V T+
Sbjct: 260 GLLYSASQDRTIKVW---RAHDGVLCRTLQGHGHWVNTM 295
Score = 129 (50.5 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 43/140 (30%), Positives = 63/140 (45%)
Query: 315 LVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISW 374
L GH+ +V + +SP K LAS S D ++R WD ++T++ T H V ISW
Sbjct: 112 LEGHSEAVISVAFSPTGK-YLASGSGDTTVRFWD---LSTETPHFTC-KGHRHWVLSISW 166
Query: 375 NRTEPLIVSGGDDGCIHVWDLRRFKKGSSVA-TFKHHTAPVTTVEWHPT----ESSTFAS 429
+ + SG +G I +WD G+ V T H+ +T + W P E AS
Sbjct: 167 SPDGKKLASGCKNGQILLWDP---STGTQVGRTLTGHSKWITGLSWEPLHMNPECRYVAS 223
Query: 430 GGADDQIALWDLAVERDSEI 449
D + +WD R I
Sbjct: 224 SSKDGSVRVWDTTAGRCERI 243
Score = 70 (29.7 bits), Expect = 6.7e-09, Sum P(2) = 6.7e-09
Identities = 19/62 (30%), Positives = 33/62 (53%)
Query: 704 LATGDCKRNIHIWTPREAGAWQVDQKPLV---GHTNSVEDLQWSPGEKRVLASCSVDRSN 760
L +G + +W+P E D+KPL GH + + +SP + R++AS S D+S
Sbjct: 346 LVSGSDDFTLFLWSPAE------DKKPLARMTGHQALINQVLFSP-DSRIVASASFDKSI 398
Query: 761 RI 762
++
Sbjct: 399 KL 400
Score = 61 (26.5 bits), Expect = 5.6e-08, Sum P(2) = 5.6e-08
Identities = 20/63 (31%), Positives = 29/63 (46%)
Query: 703 VLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRI 762
+L +G + +W + A D L GH + V + WSP +RV AS D+ RI
Sbjct: 430 LLVSGSSDSTLKVWDVK-AQKLTTD---LPGHADEVYAVDWSPDGQRV-ASGGKDKCLRI 484
Query: 763 GAR 765
R
Sbjct: 485 WRR 487
Score = 56 (24.8 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 16/60 (26%), Positives = 30/60 (50%)
Query: 703 VLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRI 762
++A+ ++I +W R G + L GH +V + WS + R+L S S D + ++
Sbjct: 388 IVASASFDKSIKLWDGR-TGKYLAS---LRGHVAAVYQIAWS-ADSRLLVSGSSDSTLKV 442
Score = 53 (23.7 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 654 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIW 684
GH E +A+DWS V A+G + + IW
Sbjct: 456 GHADEVYAVDWSPDGQRV-ASGGKDKCLRIW 485
Score = 39 (18.8 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 15/65 (23%), Positives = 27/65 (41%)
Query: 171 SFSGHLTEGFAMDWS----STEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSA 226
+ +GH + W + E +A+ ++ +W AG + + L GHT S
Sbjct: 196 TLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVWDTT-AGRCE---RILTGHTQSV 251
Query: 227 EDLQW 231
L+W
Sbjct: 252 TCLRW 256
>CGD|CAL0005013 [details] [associations]
symbol:SWD3 species:5476 "Candida albicans" [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0042800 "histone
methyltransferase activity (H3-K4 specific)" evidence=IEA]
[GO:0051568 "histone H3-K4 methylation" evidence=IEA] [GO:0006348
"chromatin silencing at telomere" evidence=IEA] [GO:0000723
"telomere maintenance" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0005013 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AACQ01000155
RefSeq:XP_712497.1 ProteinModelPortal:Q59S83 STRING:Q59S83
GeneID:3645890 KEGG:cal:CaO19.3457 Uniprot:Q59S83
Length = 383
Score = 180 (68.4 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 40/127 (31%), Positives = 66/127 (51%)
Query: 315 LVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISW 374
L GHT + D+ +SP +LASCS DL+IR+W+ I + C+ L HT + + +
Sbjct: 64 LSGHTKGISDIVYSPINSNILASCSDDLTIRLWN---ITQQRCIKLL-RKHTYHITTLKF 119
Query: 375 NRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADD 434
+ +++SG D I +WD+ G + T H+ PV+++ P + S S D
Sbjct: 120 TQKGNILISGSSDETITIWDITS-NGGKILTTLAAHSDPVSSIALTP-DDSIIVSASYDG 177
Query: 435 QIALWDL 441
+ L+DL
Sbjct: 178 LMRLFDL 184
>UNIPROTKB|F1SHE8 [details] [associations]
symbol:WDR12 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070545 "PeBoW complex" evidence=IEA] [GO:0030687
"preribosome, large subunit precursor" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 KO:K14863 OMA:LQTRFFT
GeneTree:ENSGT00640000091456 EMBL:CU469263 RefSeq:XP_003133640.3
Ensembl:ENSSSCT00000017547 GeneID:100512929 KEGG:ssc:100512929
Uniprot:F1SHE8
Length = 423
Score = 180 (68.4 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 61/208 (29%), Positives = 98/208 (47%)
Query: 231 WSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLAT 290
WS + T + + K++ + G+ P+ + SGH ++ WS E A+
Sbjct: 216 WSTVPTDEEDEMEESTNRPRKKQKTEQLGLTRTPIVTLSGHKEAISSVLWSDAEEICSAS 275
Query: 291 GDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVED-LQWSPGEKRVLASCSVDLSIRIWDT 349
D I +W E+G+ + L G N V + + +SP KR LAS S D IR+WD
Sbjct: 276 WD--HTIGVWDV-ESGSLK---STLTG--NKVFNCISYSPLCKR-LASGSTDRHIRLWDP 326
Query: 350 RVINTKSCMLTLPNAHTSDVNVISWNRT-EPLIVSGGDDGCIHVWDLRRFKKGSSVATFK 408
R + L+L +HT V + W+ T E ++SG D + +WD R K + +
Sbjct: 327 RTKDGSLVSLSL-TSHTGWVTSVKWSPTHEQQLISGSLDNIVKLWDTRSCK--APLYDLA 383
Query: 409 HHTAPVTTVEWHPTESSTFASGGADDQI 436
H V +V+W T + SGGAD+++
Sbjct: 384 AHEDKVLSVDW--TNTGLLLSGGADNKL 409
Score = 175 (66.7 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 78/294 (26%), Positives = 119/294 (40%)
Query: 180 FAMDWSSTEPGV---LATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQW--SDL 234
F DW S G + TG + IW+ + GHT+ +D+ W D
Sbjct: 99 FHDDWISAIEGAEEWILTGSYDKTSRIWSSEGKSIMTIV-----GHTDVVKDVAWVKKDS 153
Query: 235 KTAL---QTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHL--TEGFAMDWSSTEPGVLA 289
+ L ++D L E N +R K L GH + A+D + T
Sbjct: 154 LSCLLLSASMDQTILLWEWNVERNK-----VKALHCCRGHAGSVDSIAVDSTGTR---FC 205
Query: 290 TGDCKRNIHIWT----------------PREAGAWQ---VDQKPLV---GHTNSVEDLQW 327
+G + + IW+ PR+ + + + P+V GH ++ + W
Sbjct: 206 SGSWDKMLKIWSTVPTDEEDEMEESTNRPRKKQKTEQLGLTRTPIVTLSGHKEAISSVLW 265
Query: 328 SPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDD 387
S E+ + S S D +I +WD + KS TL N IS++ + SG D
Sbjct: 266 SDAEE--ICSASWDHTIGVWDVESGSLKS---TLTGNKV--FNCISYSPLCKRLASGSTD 318
Query: 388 GCIHVWDLRRFKKGSSVA-TFKHHTAPVTTVEWHPTESSTFASGGADDQIALWD 440
I +WD R K GS V+ + HT VT+V+W PT SG D+ + LWD
Sbjct: 319 RHIRLWDPRT-KDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNIVKLWD 371
Score = 146 (56.5 bits), Expect = 9.4e-07, P = 9.4e-07
Identities = 36/104 (34%), Positives = 55/104 (52%)
Query: 288 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIW 347
LA+G R+I +W PR V L HT V ++WSP ++ L S S+D +++W
Sbjct: 312 LASGSTDRHIRLWDPRTKDGSLVSLS-LTSHTGWVTSVKWSPTHEQQLISGSLDNIVKLW 370
Query: 348 DTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIH 391
DTR + K+ + L AH V + W T L++SGG D ++
Sbjct: 371 DTR--SCKAPLYDLA-AHEDKVLSVDWTNTG-LLLSGGADNKLY 410
Score = 127 (49.8 bits), Expect = 5.8e-08, Sum P(2) = 5.8e-08
Identities = 48/184 (26%), Positives = 77/184 (41%)
Query: 586 HRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGP--G 643
H G ++ + G+ +G W ++ K IW D+ + +K+ K G
Sbjct: 188 HAGSVDSIAVDSTGTRFCSGSWDKMLK--IWST-VPTDEEDEMEESTNRPRKKQKTEQLG 244
Query: 644 IPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSVYLYTNR-FG 702
+ P+ + SGH ++ WS E A+ D I +W E+G+ L N+ F
Sbjct: 245 LTRTPIVTLSGHKEAISSVLWSDAEEICSASWD--HTIGVWDV-ESGSLKSTLTGNKVFN 301
Query: 703 V---------LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLAS 753
LA+G R+I +W PR V L HT V ++WSP ++ L S
Sbjct: 302 CISYSPLCKRLASGSTDRHIRLWDPRTKDGSLVSLS-LTSHTGWVTSVKWSPTHEQQLIS 360
Query: 754 CSVD 757
S+D
Sbjct: 361 GSLD 364
Score = 77 (32.2 bits), Expect = 5.8e-08, Sum P(2) = 5.8e-08
Identities = 22/71 (30%), Positives = 31/71 (43%)
Query: 378 EPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESST--FASGGADDQ 435
E I++G D +W +G S+ T HT V V W +S + S D
Sbjct: 111 EEWILTGSYDKTSRIWS----SEGKSIMTIVGHTDVVKDVAWVKKDSLSCLLLSASMDQT 166
Query: 436 IALWDLAVERD 446
I LW+ VER+
Sbjct: 167 ILLWEWNVERN 177
Score = 51 (23.0 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 9/35 (25%), Positives = 20/35 (57%)
Query: 648 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIH 682
PL+ + H + ++DW++T G+L +G ++
Sbjct: 378 PLYDLAAHEDKVLSVDWTNT--GLLLSGGADNKLY 410
>TAIR|locus:2153914 [details] [associations]
symbol:TTG1 "AT5G24520" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM;IDA] [GO:0010026 "trichome
differentiation" evidence=IMP] [GO:0045165 "cell fate commitment"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0032880 "regulation of protein localization"
evidence=RCA;IMP] [GO:0009723 "response to ethylene stimulus"
evidence=IEP] [GO:0009733 "response to auxin stimulus"
evidence=IEP] [GO:0006612 "protein targeting to membrane"
evidence=RCA] [GO:0009963 "positive regulation of flavonoid
biosynthetic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0009957
"epidermal cell fate specification" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0005737 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009733 GO:GO:0009723 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003677 GO:GO:0032880
EMBL:AB010068 eggNOG:NOG314410 HOGENOM:HOG000260968 GO:GO:0009957
GO:GO:0010026 ProtClustDB:CLSN2682478 EMBL:AJ133743 EMBL:AJ251522
EMBL:AJ251523 EMBL:BT020231 EMBL:BT020513 EMBL:AK227211
IPI:IPI00520475 RefSeq:NP_197840.1 RefSeq:NP_851069.1
RefSeq:NP_851070.1 UniGene:At.28124 ProteinModelPortal:Q9XGN1
SMR:Q9XGN1 IntAct:Q9XGN1 STRING:Q9XGN1 PaxDb:Q9XGN1 PRIDE:Q9XGN1
EnsemblPlants:AT5G24520.1 EnsemblPlants:AT5G24520.2
EnsemblPlants:AT5G24520.3 GeneID:832523 KEGG:ath:AT5G24520
GeneFarm:3759 TAIR:At5g24520 InParanoid:Q9XGN1 OMA:RACANAV
PhylomeDB:Q9XGN1 Genevestigator:Q9XGN1 GermOnline:AT5G24520
Uniprot:Q9XGN1
Length = 341
Score = 176 (67.0 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 48/167 (28%), Positives = 73/167 (43%)
Query: 277 AMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLA 336
+ DW+ EP L T IW ++ V + L+ H V D+ W GE RV A
Sbjct: 137 SFDWNDVEPKRLGTCSIDTTCTIWDIEKS----VVETQLIAHDKEVHDIAW--GEARVFA 190
Query: 337 SCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSG--GDDGCIHVWD 394
S S D S+RI+D R + + P T + ++WN+ + ++ D + + D
Sbjct: 191 SVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLR-LAWNKQDLRYMATILMDSNKVVILD 249
Query: 395 LRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDL 441
+R VA + H A V + W P SGG D Q +W+L
Sbjct: 250 IR--SPTMPVAELERHQASVNAIAWAPQSCKHICSGGDDTQALIWEL 294
Score = 44 (20.5 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 12/46 (26%), Positives = 21/46 (45%)
Query: 703 VLATGDCKRNIHIWT-PREAGAWQVDQKPLVGHTNSVEDLQWSPGE 747
+ + GD + + IW P AG +D + + + LQWS +
Sbjct: 280 ICSGGDDTQAL-IWELPTVAGPNGIDPMSVYSAGSEINQLQWSSSQ 324
>ASPGD|ASPL0000003994 [details] [associations]
symbol:AN6160 species:162425 "Emericella nidulans"
[GO:0005847 "mRNA cleavage and polyadenylation specificity factor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:2000045
"regulation of G1/S transition of mitotic cell cycle" evidence=IEA]
[GO:0000070 "mitotic sister chromatid segregation" evidence=IEA]
[GO:0031124 "mRNA 3'-end processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0007059 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319
GO:GO:0006397 EMBL:BN001301 EMBL:AACD01000105 KO:K15542
RefSeq:XP_663764.1 ProteinModelPortal:Q5AZX0 STRING:Q5AZX0
EnsemblFungi:CADANIAT00006850 GeneID:2870757 KEGG:ani:AN6160.2
HOGENOM:HOG000213918 OMA:RDICILR OrthoDB:EOG4QVGMD Uniprot:Q5AZX0
Length = 567
Score = 181 (68.8 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 74/284 (26%), Positives = 119/284 (41%)
Query: 270 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSP 329
GH E F + W+ T D K ++ W P +D H ++V DL WSP
Sbjct: 113 GHTGE-FML-WNGTAFNFETVMD-KGDVKYWRPNFNNVETIDD----AHHDAVRDLAWSP 165
Query: 330 GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGC 389
+ + L S S D +++I+D ++C L H DV W+ T+ L+VSG D
Sbjct: 166 SDTKFL-SASDDTTLKIYD---FTARTCDTVL-TGHNWDVKSCDWHPTKGLLVSGSKDHQ 220
Query: 390 IHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEI 449
+ WD R + + T H VT ++ ++ A+ D ++DL + RD I
Sbjct: 221 VKFWDPRTAR---CLTTLHSHKNTVTATKFSRVNNNLLATSSRDQTARVFDLRMMRDICI 277
Query: 450 EQ-REAELKDL---PSQLLFIHLGQKEIKELHW---HPQLPGTIISTANSGFNIFRTISD 502
+ E + L P I G ++ H+ P LP I T + ++ ++
Sbjct: 278 LRGHEKPISTLTWHPVHCSLISTGSEDGSLYHYLLDEPNLPAGQIPTV-APYDS-PDPAN 335
Query: 503 LPSQLLF-IHLGQ----KEIKELHWHPQLPGTIISTANSGFNIF 541
P+Q+++ H Q I L WHP L + S + F F
Sbjct: 336 TPAQVIYPAHRIQYAHAATIWTLDWHP-LGHILASGSKDNFTRF 378
Score = 149 (57.5 bits), Expect = 7.3e-07, P = 7.3e-07
Identities = 70/294 (23%), Positives = 114/294 (38%)
Query: 174 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSD 233
GH E F + W+ T D K ++ W P +D H ++ DL WS
Sbjct: 113 GHTGE-FML-WNGTAFNFETVMD-KGDVKYWRPNFNNVETIDD----AHHDAVRDLAWSP 165
Query: 234 LKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDC 293
T + D L ++ + T GH + + DW T+ G+L +G
Sbjct: 166 SDTKFLSASDDTTLKIYDFTARTCDTVLT-------GHNWDVKSCDWHPTK-GLLVSGSK 217
Query: 294 KRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVIN 353
+ W PR A L H N+V ++S +LA+ S D + R++D R++
Sbjct: 218 DHQVKFWDPRTARCLTT----LHSHKNTVTATKFSRVNNNLLATSSRDQTARVFDLRMMR 273
Query: 354 TKSCMLTLPNAHTSDVNVISWNRTE-PLIVSGGDDGCIHVW--DLRRFKKGS--SVATFK 408
C+L H ++ ++W+ LI +G +DG ++ + D G +VA +
Sbjct: 274 D-ICIL---RGHEKPISTLTWHPVHCSLISTGSEDGSLYHYLLDEPNLPAGQIPTVAPYD 329
Query: 409 ---------------H-----HTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442
H H A + T++WHP ASG D+ W A
Sbjct: 330 SPDPANTPAQVIYPAHRIQYAHAATIWTLDWHPL-GHILASGSKDNFTRFWSRA 382
>TAIR|locus:2090792 [details] [associations]
symbol:LWD2 "AT3G26640" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0043153 "entrainment of
circadian clock by photoperiod" evidence=IEP] [GO:0048573
"photoperiodism, flowering" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0048511 GO:GO:0048573
GO:GO:0043153 eggNOG:NOG314410 HOGENOM:HOG000260968 EMBL:X98130
EMBL:AB026648 ProtClustDB:CLSN2682478 EMBL:X97488 EMBL:BT004214
EMBL:AY086141 EMBL:BT020361 IPI:IPI00540911 RefSeq:NP_189298.1
UniGene:At.19781 ProteinModelPortal:Q38960 SMR:Q38960 STRING:Q38960
PaxDb:Q38960 PRIDE:Q38960 EnsemblPlants:AT3G26640.1 GeneID:822276
KEGG:ath:AT3G26640 GeneFarm:2845 TAIR:At3g26640 InParanoid:Q38960
OMA:HSSSHIC PhylomeDB:Q38960 Genevestigator:Q38960 Uniprot:Q38960
Length = 346
Score = 176 (67.0 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 66/234 (28%), Positives = 98/234 (41%)
Query: 268 FSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWT-PREAGAWQVDQKPLVGHTNSVEDLQ 326
FSG +T + DW+ EP + T IW RE VD + L+ H V D+
Sbjct: 134 FSGPIT---SFDWNEAEPRRIGTSSIDTTCTIWDIEREV----VDTQ-LIAHDKEVYDIA 185
Query: 327 WSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGD 386
W G V AS S D S+R++D R + + T V +SWN+ +P ++
Sbjct: 186 W--GGVGVFASVSEDGSVRVFDLRDKEHSTIIYESGEPSTPLVR-LSWNKQDPRYMATVI 242
Query: 387 DGC--IHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444
G I V D+R F V + H A V + W P SS S G D Q +WD++
Sbjct: 243 MGSAKIVVLDIR-FP-ALPVVELQRHQASVNAIAWAPHSSSHICSAGDDSQALIWDIS-- 298
Query: 445 RDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFR 498
S + E L P + + E+++L W P + ++ I R
Sbjct: 299 --SMGQHVEGGLD--P---ILAYTAGAEVEQLQWSSSQPDWVAIAFSNKLQILR 345
>UNIPROTKB|B4KTK4 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7230 "Drosophila mojavensis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH933808 OrthoDB:EOG45DV4X RefSeq:XP_002005652.1
ProteinModelPortal:B4KTK4 EnsemblMetazoa:FBtr0169681 GeneID:6579773
KEGG:dmo:Dmoj_GI18956 FlyBase:FBgn0141695 InParanoid:B4KTK4
Uniprot:B4KTK4
Length = 331
Score = 178 (67.7 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 79/340 (23%), Positives = 143/340 (42%)
Query: 171 SFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQ 230
+ GH + + W + G+ K I IW+ W GH + +++
Sbjct: 9 TLQGHKGRIWGVAWHPKGNSFASCGEDKA-IRIWS-LSGNTWTTKTILSDGHKRTIREVR 66
Query: 231 WSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLAT 290
WS L + A +K + GH E ++ WS + G+LAT
Sbjct: 67 WSPCGEYLASASFDATTAIWSKHECTA---------TLEGHENEVKSVSWSRSG-GLLAT 116
Query: 291 GDCKRNIHIWTPREAGAWQVDQKPLVG-HTNSVEDLQWSPGEKRVLASCSVDLSIRIWDT 349
C R+ +W AG + + ++ H+ V+ + W P K +LAS S D +I+++
Sbjct: 117 --CSRDKSVWIWEVAGDDEFECAAVLNAHSQDVKRVVWHP-TKEILASASYDNTIKMYAE 173
Query: 350 RVINTK-SCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSS--VAT 406
+++ C TL ++HTS V I ++ +VS DD + +W R + G+ +AT
Sbjct: 174 SALDSDWDCTATL-SSHTSTVWSIDFDADGERLVSCSDDATLKIW--RAYHPGNEAGIAT 230
Query: 407 ------FKH-------HTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQRE 453
+K HT + V W + AS DD I ++ ++S +R+
Sbjct: 231 PDKTTVWKCVCTLSGLHTRAIYDVSWCKL-TGLIASACGDDAIRIF-----KESSDSKRD 284
Query: 454 AELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSG 493
A +L + H ++++ + W+P G +IS ++ G
Sbjct: 285 APSFELLTSEESAH--EQDVNAVEWNPVNVGQLISCSDDG 322
Score = 165 (63.1 bits), Expect = 9.3e-09, Sum P(2) = 9.3e-09
Identities = 68/278 (24%), Positives = 115/278 (41%)
Query: 270 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSP 329
GH + WS LA+ IW+ E A L GH N V+ + WS
Sbjct: 57 GHKRTIREVRWSPCGE-YLASASFDATTAIWSKHECTA------TLEGHENEVKSVSWSR 109
Query: 330 GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGC 389
+LA+CS D S+ IW+ + C L NAH+ DV + W+ T+ ++ S D
Sbjct: 110 SGG-LLATCSRDKSVWIWEVAGDDEFECAAVL-NAHSQDVKRVVWHPTKEILASASYDNT 167
Query: 390 IHVWDLRRFKKG-SSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSE 448
I ++ AT HT+ V ++++ + S D + +W A +E
Sbjct: 168 IKMYAESALDSDWDCTATLSSHTSTVWSIDFD-ADGERLVSCSDDATLKIWR-AYHPGNE 225
Query: 449 IEQREAELKDLPSQLLFIH-LGQKEIKELHWHPQLPGTIISTA-NSGFNIFRTISD---- 502
+ + + + L + I ++ W +L G I S + IF+ SD
Sbjct: 226 AGIATPDKTTVWKCVCTLSGLHTRAIYDVSWC-KLTGLIASACGDDAIRIFKESSDSKRD 284
Query: 503 LPS-QLLFIHLG--QKEIKELHWHPQLPGTIISTANSG 537
PS +LL ++++ + W+P G +IS ++ G
Sbjct: 285 APSFELLTSEESAHEQDVNAVEWNPVNVGQLISCSDDG 322
Score = 131 (51.2 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 59/245 (24%), Positives = 103/245 (42%)
Query: 171 SFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVD-QKPLGGHTNSAEDL 229
+ GH E ++ WS + G+LAT C R+ +W AG + + L H+ + +
Sbjct: 94 TLEGHENEVKSVSWSRSG-GLLAT--CSRDKSVWIWEVAGDDEFECAAVLNAHSQDVKRV 150
Query: 230 QWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLA 289
W K L + + + + T L S H + +++D+ + +++
Sbjct: 151 VWHPTKEILASASYDNTIKMYAESALDSDWDCTATL---SSHTSTVWSIDFDADGERLVS 207
Query: 290 TGD---CK--RNIH------IWTPREAGAWQVDQKPLVG-HTNSVEDLQWSPGEKRVLAS 337
D K R H I TP + W+ L G HT ++ D+ W + ++
Sbjct: 208 CSDDATLKIWRAYHPGNEAGIATPDKTTVWKC-VCTLSGLHTRAIYDVSWCKLTGLIASA 266
Query: 338 CSVDLSIRIWDTRVINTKSC----MLTLP-NAHTSDVNVISWNRTEP-LIVSGGDDGCIH 391
C D +IRI+ + + +LT +AH DVN + WN ++S DDG I
Sbjct: 267 CGDD-AIRIFKESSDSKRDAPSFELLTSEESAHEQDVNAVEWNPVNVGQLISCSDDGTIK 325
Query: 392 VWDLR 396
+W L+
Sbjct: 326 IWKLQ 330
Score = 39 (18.8 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 10/36 (27%), Positives = 16/36 (44%)
Query: 653 SGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPRE 688
S H + A++W+ G L + I IW +E
Sbjct: 296 SAHEQDVNAVEWNPVNVGQLISCSDDGTIKIWKLQE 331
>SGD|S000000782 [details] [associations]
symbol:HAT2 "Subunit of the Hat1p-Hat2p histone
acetyltransferase complex" species:4932 "Saccharomyces cerevisiae"
[GO:0042393 "histone binding" evidence=IDA] [GO:0000123 "histone
acetyltransferase complex" evidence=IDA;IPI] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0006333 "chromatin assembly or disassembly"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0004402
"histone acetyltransferase activity" evidence=IDA;IMP;IPI]
[GO:0016573 "histone acetylation" evidence=IDA;IMP] [GO:0006348
"chromatin silencing at telomere" evidence=IGI] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000000782 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006281
eggNOG:COG2319 GO:GO:0016573 EMBL:BK006939 GO:GO:0006333
GO:GO:0006348 EMBL:U18795 GO:GO:0042393
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0000123 HOGENOM:HOG000160330 OrthoDB:EOG412QFD
PIR:S50533 RefSeq:NP_010858.3 RefSeq:NP_010861.3
ProteinModelPortal:P39984 SMR:P39984 DIP:DIP-2363N IntAct:P39984
MINT:MINT-654148 STRING:P39984 PaxDb:P39984 PeptideAtlas:P39984
EnsemblFungi:YEL056W GeneID:856654 GeneID:856657 KEGG:sce:YEL053C
KEGG:sce:YEL056W CYGD:YEL056w OMA:VLYDLVI NextBio:982637
Genevestigator:P39984 GermOnline:YEL056W Uniprot:P39984
Length = 401
Score = 177 (67.4 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 53/241 (21%), Positives = 106/241 (43%)
Query: 271 HLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVG----HTNSVEDLQ 326
H G+A+ +S+ G L +G + +W E G+ KP+ H++ + D +
Sbjct: 159 HKDNGYALSFSTLVKGRLLSGSDDHTVALW---EVGSGGDPTKPVRTWNDLHSDIINDNK 215
Query: 327 WSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR-TEPLIVSGG 385
W K + + S D ++I D R NT + P N ++++ + L+ + G
Sbjct: 216 WHNFNKDLFGTVSEDSLLKINDVRANNTTIDTVKCPQPF----NTLAFSHHSSNLLAAAG 271
Query: 386 DDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVER 445
D ++++DLR K+ + H V +E+ S G+D+++ +WDL +
Sbjct: 272 MDSYVYLYDLRNMKE--PLHHMSGHEDAVNNLEFSTHVDGVVVSSGSDNRLMMWDL---K 326
Query: 446 DSEIEQREAELKDLPSQLLFIHLGQKE-IKELHWHPQLPGTIISTANSGF-NIFRTISDL 503
EQ + +D +L+ +H G + + + +PQ+P + S +++ L
Sbjct: 327 QIGAEQTPDDAEDGVPELIMVHAGHRSSVNDFDLNPQIPWLVASAEEENILQVWKCSHSL 386
Query: 504 P 504
P
Sbjct: 387 P 387
>UNIPROTKB|B4LJT7 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7244 "Drosophila virilis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CH940648 OMA:SWKCVCT OrthoDB:EOG45DV4X
RefSeq:XP_002049403.1 ProteinModelPortal:B4LJT7 STRING:B4LJT7
EnsemblMetazoa:FBtr0237487 GeneID:6626094 KEGG:dvi:Dvir_GJ21562
FlyBase:FBgn0208682 InParanoid:B4LJT7 Uniprot:B4LJT7
Length = 331
Score = 177 (67.4 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 78/340 (22%), Positives = 143/340 (42%)
Query: 171 SFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQ 230
+ GH + + W + G+ K I IW+ W GH + +++
Sbjct: 9 TLQGHKGRIWGVAWHPKGNSFASCGEDKA-IRIWS-LSGNTWTTKTILSDGHKRTIREVR 66
Query: 231 WSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLAT 290
WS L + A +K + GH E ++ WS + G+LAT
Sbjct: 67 WSPCGEYLASASFDATTAIWSKHECTA---------TLEGHENEVKSVSWSRSG-GLLAT 116
Query: 291 GDCKRNIHIWTPREAGAWQVDQKPLVG-HTNSVEDLQWSPGEKRVLASCSVDLSIRIWDT 349
C R+ +W AG + + ++ H+ V+ + W P K VLAS S D +I+++
Sbjct: 117 --CSRDKSVWIWEVAGDDEFECAAVLNAHSQDVKRVVWHP-TKEVLASASYDNTIKMFAE 173
Query: 350 RVINTK-SCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSS--VAT 406
+++ C TL ++HTS V I ++ +VS DD + +W R + G+ +AT
Sbjct: 174 SALDSDWDCTATL-SSHTSTVWSIDFDADGERLVSCSDDATLKIW--RAYHPGNDAGIAT 230
Query: 407 ------FK-------HHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQRE 453
+K H+ + V W ++ AS DD I ++ ++ +R+
Sbjct: 231 PDKTTVWKCVCTLSGEHSRAIYDVSWCK-QTGLIASACGDDGIRIF-----KECSDSKRD 284
Query: 454 AELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSG 493
A +L + H ++++ + W+P G +IS ++ G
Sbjct: 285 APTFELLTAEESAH--EQDVNAVEWNPVTAGQLISCSDDG 322
Score = 165 (63.1 bits), Expect = 9.3e-09, Sum P(2) = 9.3e-09
Identities = 69/280 (24%), Positives = 116/280 (41%)
Query: 270 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSP 329
GH + WS LA+ IW+ E A L GH N V+ + WS
Sbjct: 57 GHKRTIREVRWSPCGE-YLASASFDATTAIWSKHECTA------TLEGHENEVKSVSWSR 109
Query: 330 GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGC 389
+LA+CS D S+ IW+ + C L NAH+ DV + W+ T+ ++ S D
Sbjct: 110 SGG-LLATCSRDKSVWIWEVAGDDEFECAAVL-NAHSQDVKRVVWHPTKEVLASASYDNT 167
Query: 390 IHVWDLRRFKKG-SSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE-RDS 447
I ++ AT HT+ V ++++ + S D + +W D+
Sbjct: 168 IKMFAESALDSDWDCTATLSSHTSTVWSIDFD-ADGERLVSCSDDATLKIWRAYHPGNDA 226
Query: 448 EIEQREAELKDLPSQLLFIHLGQ--KEIKELHWHPQLPGTIISTA-NSGFNIFRTISD-- 502
I + K + + G+ + I ++ W Q G I S + G IF+ SD
Sbjct: 227 GIATPD---KTTVWKCVCTLSGEHSRAIYDVSWCKQT-GLIASACGDDGIRIFKECSDSK 282
Query: 503 --LPS-QLLFIHLG--QKEIKELHWHPQLPGTIISTANSG 537
P+ +LL ++++ + W+P G +IS ++ G
Sbjct: 283 RDAPTFELLTAEESAHEQDVNAVEWNPVTAGQLISCSDDG 322
Score = 134 (52.2 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 60/247 (24%), Positives = 104/247 (42%)
Query: 171 SFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVD-QKPLGGHTNSAEDL 229
+ GH E ++ WS + G+LAT C R+ +W AG + + L H+ + +
Sbjct: 94 TLEGHENEVKSVSWSRSG-GLLAT--CSRDKSVWIWEVAGDDEFECAAVLNAHSQDVKRV 150
Query: 230 QWSDLKTALQTV--DDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGV 287
W K L + D+ ++ + T S H + +++D+ + +
Sbjct: 151 VWHPTKEVLASASYDNTIKMFAESALDSDWDCTAT-----LSSHTSTVWSIDFDADGERL 205
Query: 288 LATGD---CK--RNIH------IWTPREAGAWQVDQKPLVG-HTNSVEDLQWSPGEKRVL 335
++ D K R H I TP + W+ L G H+ ++ D+ W +
Sbjct: 206 VSCSDDATLKIWRAYHPGNDAGIATPDKTTVWKC-VCTLSGEHSRAIYDVSWCKQTGLIA 264
Query: 336 ASCSVDLSIRIW----DT-RVINTKSCMLTLPNAHTSDVNVISWNR-TEPLIVSGGDDGC 389
++C D IRI+ D+ R T + +AH DVN + WN T ++S DDG
Sbjct: 265 SACGDD-GIRIFKECSDSKRDAPTFELLTAEESAHEQDVNAVEWNPVTAGQLISCSDDGT 323
Query: 390 IHVWDLR 396
I +W L+
Sbjct: 324 IKIWKLQ 330
Score = 39 (18.8 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 10/36 (27%), Positives = 16/36 (44%)
Query: 653 SGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPRE 688
S H + A++W+ G L + I IW +E
Sbjct: 296 SAHEQDVNAVEWNPVTAGQLISCSDDGTIKIWKLQE 331
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 174 (66.3 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 55/192 (28%), Positives = 88/192 (45%)
Query: 253 KRGKGPGIPTPPL-FSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVD 311
+R + P P L + +GH ++ +S LA+ I IW GA+ +
Sbjct: 19 RREEEPQKPNYALRLTLAGHSAAISSVKFSPNGEW-LASSAADALIIIW-----GAYDGN 72
Query: 312 -QKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVN 370
+K L GH+ + D+ WS R L S S D ++++WD R + C+ TL H+ V
Sbjct: 73 CKKTLYGHSLEISDVAWSSDSSR-LVSASDDKTLKVWDMR---SGKCLKTL-KGHSDFVF 127
Query: 371 VISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASG 430
+N LIVSG D + +W++ K G + T H+ P++ V ++ S SG
Sbjct: 128 CCDFNPPSNLIVSGSFDESVKIWEV---KTGKCLKTLSAHSDPISAVNFN-CNGSLIVSG 183
Query: 431 GADDQIALWDLA 442
D +WD A
Sbjct: 184 SYDGLCRIWDAA 195
Score = 166 (63.5 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 48/172 (27%), Positives = 80/172 (46%)
Query: 270 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSP 329
GH E + WSS +++ D K + +W R K L GH++ V ++P
Sbjct: 79 GHSLEISDVAWSSDSSRLVSASDDK-TLKVWDMRSGKCL----KTLKGHSDFVFCCDFNP 133
Query: 330 GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGC 389
++ S S D S++IW+ + T C+ TL +AH+ ++ +++N LIVSG DG
Sbjct: 134 -PSNLIVSGSFDESVKIWE---VKTGKCLKTL-SAHSDPISAVNFNCNGSLIVSGSYDGL 188
Query: 390 IHVWDLRRFKKGSSVATFKHH-TAPVTTVEWHPTESSTFASGGADDQIALWD 440
+WD G + T PV+ V++ P + D+ + LWD
Sbjct: 189 CRIWDAA---SGQCLRTLADEGNPPVSFVKFSPN-GKYILTATLDNTLKLWD 236
>UNIPROTKB|F1P0F4 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00821846
Ensembl:ENSGALT00000040449 ArrayExpress:F1P0F4 Uniprot:F1P0F4
Length = 661
Score = 180 (68.4 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 52/177 (29%), Positives = 84/177 (47%)
Query: 265 LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVED 324
+ S +GH T ++ S+ E ++A G +I +W + A ++ + L+GH ++
Sbjct: 56 VMSLTGHTTPIESLQISAKEELIVA-GSQSGSIRVW---DLEAAKI-LRTLLGHKANICS 110
Query: 325 LQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSG 384
L + P V AS S+D I++WD R K C+ +HT V + ++ + S
Sbjct: 111 LDFHPYGSFV-ASGSLDTDIKLWDVR---RKGCIFKY-KSHTQAVRCLRFSPDGKWLASA 165
Query: 385 GDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDL 441
DD + +WDL G + F H PV VE+HP+ ASG + I WDL
Sbjct: 166 ADDHTVKLWDLTA---GKVMFEFTGHYGPVNVVEFHPSIEYLLASGSSSMTIRFWDL 219
Score = 179 (68.1 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 42/135 (31%), Positives = 70/135 (51%)
Query: 307 AWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHT 366
AW++ + +V H+++V L R+LA+ D + +W +N +C+++L HT
Sbjct: 10 AWKLQE--IVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWS---VNKPNCVMSL-TGHT 63
Query: 367 SDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESST 426
+ + + + E LIV+G G I VWDL K + T H A + ++++HP S
Sbjct: 64 TPIESLQISAKEELIVAGSQSGSIRVWDLEAAK---ILRTLLGHKANICSLDFHPY-GSF 119
Query: 427 FASGGADDQIALWDL 441
ASG D I LWD+
Sbjct: 120 VASGSLDTDIKLWDV 134
Score = 44 (20.5 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 9/36 (25%), Positives = 17/36 (47%)
Query: 649 LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIW 684
+F F+GH +++ + +LA+G I W
Sbjct: 182 MFEFTGHYGPVNVVEFHPSIEYLLASGSSSMTIRFW 217
>MGI|MGI:2441730 [details] [associations]
symbol:Tbl1xr1 "transducin (beta)-like 1X-linked receptor 1"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003714 "transcription
corepressor activity" evidence=ISO;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IC]
[GO:0005876 "spindle microtubule" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=ISO] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] [GO:0044212 "transcription
regulatory region DNA binding" evidence=ISO;IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;IMP] [GO:0047485
"protein N-terminus binding" evidence=ISO] [GO:0060070 "canonical
Wnt receptor signaling pathway" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 MGI:MGI:2441730 GO:GO:0017053
GO:GO:0003714 GO:GO:0045892 GO:GO:0005654 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 GO:GO:0016568 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070
GO:GO:0005876 GO:GO:0000118 GeneTree:ENSGT00690000102024 KO:K04508
CTD:79718 HOGENOM:HOG000220902 HOVERGEN:HBG050240 OMA:LANNHAD
OrthoDB:EOG412M5M ChiTaRS:TBL1XR1 EMBL:AF268195 EMBL:AK029595
EMBL:AK033347 EMBL:AK036064 EMBL:AK136255 EMBL:BC018512
IPI:IPI00308283 RefSeq:NP_109657.2 UniGene:Mm.202966
UniGene:Mm.446265 ProteinModelPortal:Q8BHJ5 SMR:Q8BHJ5
IntAct:Q8BHJ5 STRING:Q8BHJ5 PhosphoSite:Q8BHJ5 PaxDb:Q8BHJ5
PRIDE:Q8BHJ5 DNASU:81004 Ensembl:ENSMUST00000063988 GeneID:81004
KEGG:mmu:81004 InParanoid:Q8BHJ5 NextBio:350342 Bgee:Q8BHJ5
CleanEx:MM_TBL1XR1 Genevestigator:Q8BHJ5
GermOnline:ENSMUSG00000027630 Uniprot:Q8BHJ5
Length = 514
Score = 178 (67.7 bits), Expect = 4.3e-10, P = 4.3e-10
Identities = 70/270 (25%), Positives = 115/270 (42%)
Query: 180 FAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQ 239
FA+ W+ +L+ G K I IW A Q Q P H+ A D+ W T
Sbjct: 270 FALKWNKKGNFILSAGVDKTTI-IWDAHTGEAKQ--QFPF--HSAPALDVDWQSNNTFAS 324
Query: 240 TVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHI 299
D + H K G+ P+ +F GH E A+ W T +LA+ + I
Sbjct: 325 CSTD---MCIHVCKLGQDR-----PIKTFQGHTNEVNAIKWDPTG-NLLASCSDDMTLKI 375
Query: 300 WTPREAGAWQVDQKPLVGHTNSVEDLQWSP---GEKR-----VLASCSVDLSIRIWDTRV 351
W+ ++ D L H + ++WSP G +LAS S D ++R+WD
Sbjct: 376 WSMKQDNCVH-D---LQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWD--- 428
Query: 352 INTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHT 411
++ C+ TL H V ++++ + SG D C+H+W+ + G+ V +++ T
Sbjct: 429 VDRGICIHTLTK-HQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQT---GALVHSYRG-T 483
Query: 412 APVTTVEWHPTESSTFASGGADDQIALWDL 441
+ V W+ AS +D + + DL
Sbjct: 484 GGIFEVCWNAAGDKVGASA-SDGSVCVLDL 512
Score = 170 (64.9 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 74/289 (25%), Positives = 110/289 (38%)
Query: 164 IPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHT 223
IP+ GH +E F W+ +LA+G IW E Q L H
Sbjct: 157 IPSNKAVVLRGHESEVFICAWNPVSD-LLASGSGDSTARIWNLSENSTSGPTQLVLR-HC 214
Query: 224 --NSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSG-HLTEGFAMDW 280
+D+ + T+L + LA + L S G H FA+ W
Sbjct: 215 IREGGQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIWTKDGNLASTLGQHKGPIFALKW 274
Query: 281 SSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSV 340
+ +L+ G K I IW A Q Q P H+ D+ W ASCS
Sbjct: 275 NKKGNFILSAGVDKTTI-IWDAHTGEAKQ--QFPF--HSAPALDVDWQ--SNNTFASCST 327
Query: 341 DLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKK 400
D+ I + + + T HT++VN I W+ T L+ S DD + +W + K+
Sbjct: 328 DMCIHVCK---LGQDRPIKTF-QGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSM---KQ 380
Query: 401 GSSVATFKHHTAPVTTVEWHPTESST--------FASGGADDQIALWDL 441
+ V + H + T++W PT T AS D + LWD+
Sbjct: 381 DNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDV 429
Score = 124 (48.7 bits), Expect = 0.00033, P = 0.00033
Identities = 57/234 (24%), Positives = 87/234 (37%)
Query: 172 FSGHLTEGFAMDWSSTEPGVLATGD-CKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQ 230
F H +DW S + D C IH+ + G + K GHTN ++
Sbjct: 304 FPFHSAPALDVDWQSNNTFASCSTDMC---IHVC---KLGQDR-PIKTFQGHTNEVNAIK 356
Query: 231 WSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLAT 290
W L + D L + K+ + H E + + WS T PG T
Sbjct: 357 WDPTGNLLASCSDDMTLKIWSMKQDNC-------VHDLQAHNKEIYTIKWSPTGPG---T 406
Query: 291 GDCKRNIHIWTPR---EAGAWQVDQ----KPLVGHTNSVEDLQWSPGEKRVLASCSVDLS 343
+ N+ + + W VD+ L H V + +SP + R LAS S D
Sbjct: 407 NNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSP-DGRYLASGSFDKC 465
Query: 344 IRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRR 397
+ IW NT++ L T + + WN + + DG + V DLR+
Sbjct: 466 VHIW-----NTQTGALVHSYRGTGGIFEVCWNAAGDKVGASASDGSVCVLDLRK 514
>UNIPROTKB|Q9BZK7 [details] [associations]
symbol:TBL1XR1 "F-box-like/WD repeat-containing protein
TBL1XR1" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0060070 "canonical Wnt receptor signaling
pathway" evidence=IMP] [GO:0003714 "transcription corepressor
activity" evidence=IGI;IDA] [GO:0042393 "histone binding"
evidence=IDA] [GO:0017053 "transcriptional repressor complex"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISS;IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0008013 "beta-catenin binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=IDA] [GO:0000118
"histone deacetylase complex" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0047485 "protein N-terminus binding" evidence=IPI] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0044255 "cellular lipid metabolic process"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_111217 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_111102 GO:GO:0017053 GO:GO:0003714 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0044281 EMBL:CH471052 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0007219
GO:GO:0044255 GO:GO:0006351 GO:GO:0016568 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393
GO:GO:0060070 GO:GO:0005876 KO:K04508 EMBL:AF314544 EMBL:AF268193
EMBL:AK022956 EMBL:BC060320 EMBL:BC113421 IPI:IPI00002922
RefSeq:NP_078941.2 UniGene:Hs.581171 ProteinModelPortal:Q9BZK7
SMR:Q9BZK7 IntAct:Q9BZK7 STRING:Q9BZK7 PhosphoSite:Q9BZK7
DMDM:23396874 PaxDb:Q9BZK7 PRIDE:Q9BZK7 Ensembl:ENST00000430069
Ensembl:ENST00000457928 GeneID:79718 KEGG:hsa:79718 UCSC:uc003fiw.4
CTD:79718 GeneCards:GC03M176737 H-InvDB:HIX0147994 HGNC:HGNC:29529
HPA:HPA019182 MIM:608628 neXtProt:NX_Q9BZK7 PharmGKB:PA134928556
HOGENOM:HOG000220902 HOVERGEN:HBG050240 InParanoid:Q9BZK7
OMA:LANNHAD OrthoDB:EOG412M5M ChiTaRS:TBL1XR1 GenomeRNAi:79718
NextBio:69065 PMAP-CutDB:Q9BZK7 ArrayExpress:Q9BZK7 Bgee:Q9BZK7
CleanEx:HS_TBL1XR1 Genevestigator:Q9BZK7 GermOnline:ENSG00000177565
Uniprot:Q9BZK7
Length = 514
Score = 178 (67.7 bits), Expect = 4.3e-10, P = 4.3e-10
Identities = 70/270 (25%), Positives = 115/270 (42%)
Query: 180 FAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQ 239
FA+ W+ +L+ G K I IW A Q Q P H+ A D+ W T
Sbjct: 270 FALKWNKKGNFILSAGVDKTTI-IWDAHTGEAKQ--QFPF--HSAPALDVDWQSNNTFAS 324
Query: 240 TVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHI 299
D + H K G+ P+ +F GH E A+ W T +LA+ + I
Sbjct: 325 CSTD---MCIHVCKLGQDR-----PIKTFQGHTNEVNAIKWDPTG-NLLASCSDDMTLKI 375
Query: 300 WTPREAGAWQVDQKPLVGHTNSVEDLQWSP---GEKR-----VLASCSVDLSIRIWDTRV 351
W+ ++ D L H + ++WSP G +LAS S D ++R+WD
Sbjct: 376 WSMKQDNCVH-D---LQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWD--- 428
Query: 352 INTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHT 411
++ C+ TL H V ++++ + SG D C+H+W+ + G+ V +++ T
Sbjct: 429 VDRGICIHTLTK-HQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQT---GALVHSYRG-T 483
Query: 412 APVTTVEWHPTESSTFASGGADDQIALWDL 441
+ V W+ AS +D + + DL
Sbjct: 484 GGIFEVCWNAAGDKVGASA-SDGSVCVLDL 512
Score = 168 (64.2 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 74/289 (25%), Positives = 109/289 (37%)
Query: 164 IPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHT 223
IP GH +E F W+ +LA+G IW E Q L H
Sbjct: 157 IPPNKAVVLRGHESEVFICAWNPVSD-LLASGSGDSTARIWNLSENSTSGSTQLVLR-HC 214
Query: 224 --NSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSG-HLTEGFAMDW 280
+D+ + T+L + LA + L S G H FA+ W
Sbjct: 215 IREGGQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIWTKDGNLASTLGQHKGPIFALKW 274
Query: 281 SSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSV 340
+ +L+ G K I IW A Q Q P H+ D+ W ASCS
Sbjct: 275 NKKGNFILSAGVDKTTI-IWDAHTGEAKQ--QFPF--HSAPALDVDWQ--SNNTFASCST 327
Query: 341 DLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKK 400
D+ I + + + T HT++VN I W+ T L+ S DD + +W + K+
Sbjct: 328 DMCIHVCK---LGQDRPIKTF-QGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSM---KQ 380
Query: 401 GSSVATFKHHTAPVTTVEWHPTESST--------FASGGADDQIALWDL 441
+ V + H + T++W PT T AS D + LWD+
Sbjct: 381 DNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDV 429
Score = 124 (48.7 bits), Expect = 0.00033, P = 0.00033
Identities = 57/234 (24%), Positives = 87/234 (37%)
Query: 172 FSGHLTEGFAMDWSSTEPGVLATGD-CKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQ 230
F H +DW S + D C IH+ + G + K GHTN ++
Sbjct: 304 FPFHSAPALDVDWQSNNTFASCSTDMC---IHVC---KLGQDR-PIKTFQGHTNEVNAIK 356
Query: 231 WSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLAT 290
W L + D L + K+ + H E + + WS T PG T
Sbjct: 357 WDPTGNLLASCSDDMTLKIWSMKQDNC-------VHDLQAHNKEIYTIKWSPTGPG---T 406
Query: 291 GDCKRNIHIWTPR---EAGAWQVDQ----KPLVGHTNSVEDLQWSPGEKRVLASCSVDLS 343
+ N+ + + W VD+ L H V + +SP + R LAS S D
Sbjct: 407 NNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSP-DGRYLASGSFDKC 465
Query: 344 IRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRR 397
+ IW NT++ L T + + WN + + DG + V DLR+
Sbjct: 466 VHIW-----NTQTGALVHSYRGTGGIFEVCWNAAGDKVGASASDGSVCVLDLRK 514
>UNIPROTKB|F1SGD0 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0017053 GO:GO:0003714 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 GO:GO:0060070 GO:GO:0005876
GO:GO:0000118 GeneTree:ENSGT00690000102024 OMA:GYARIWM
EMBL:CU856317 Ensembl:ENSSSCT00000012871 Uniprot:F1SGD0
Length = 514
Score = 178 (67.7 bits), Expect = 4.3e-10, P = 4.3e-10
Identities = 70/270 (25%), Positives = 115/270 (42%)
Query: 180 FAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQ 239
FA+ W+ +L+ G K I IW A Q Q P H+ A D+ W T
Sbjct: 270 FALKWNKKGNFILSAGVDKTTI-IWDAHTGEAKQ--QFPF--HSAPALDVDWQSNNTFAS 324
Query: 240 TVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHI 299
D + H K G+ P+ +F GH E A+ W T +LA+ + I
Sbjct: 325 CSTD---MCIHVCKLGQDR-----PIKTFQGHTNEVNAIKWDPTG-NLLASCSDDMTLKI 375
Query: 300 WTPREAGAWQVDQKPLVGHTNSVEDLQWSP---GEKR-----VLASCSVDLSIRIWDTRV 351
W+ ++ D L H + ++WSP G +LAS S D ++R+WD
Sbjct: 376 WSMKQDNCVH-D---LQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWD--- 428
Query: 352 INTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHT 411
++ C+ TL H V ++++ + SG D C+H+W+ + G+ V +++ T
Sbjct: 429 VDRGICIHTLTK-HQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQT---GALVHSYRG-T 483
Query: 412 APVTTVEWHPTESSTFASGGADDQIALWDL 441
+ V W+ AS +D + + DL
Sbjct: 484 GGIFEVCWNAAGDKVGASA-SDGSVCVLDL 512
Score = 168 (64.2 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 74/289 (25%), Positives = 109/289 (37%)
Query: 164 IPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHT 223
IP GH +E F W+ +LA+G IW E Q L H
Sbjct: 157 IPPNKAVVLRGHESEVFICAWNPVSD-LLASGSGDSTARIWNLSENSTSGSTQLVLR-HC 214
Query: 224 --NSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSG-HLTEGFAMDW 280
+D+ + T+L + LA + L S G H FA+ W
Sbjct: 215 IREGGQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIWTKDGNLASTLGQHKGPIFALKW 274
Query: 281 SSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSV 340
+ +L+ G K I IW A Q Q P H+ D+ W ASCS
Sbjct: 275 NKKGNFILSAGVDKTTI-IWDAHTGEAKQ--QFPF--HSAPALDVDWQ--SNNTFASCST 327
Query: 341 DLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKK 400
D+ I + + + T HT++VN I W+ T L+ S DD + +W + K+
Sbjct: 328 DMCIHVCK---LGQDRPIKTF-QGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSM---KQ 380
Query: 401 GSSVATFKHHTAPVTTVEWHPTESST--------FASGGADDQIALWDL 441
+ V + H + T++W PT T AS D + LWD+
Sbjct: 381 DNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDV 429
Score = 124 (48.7 bits), Expect = 0.00033, P = 0.00033
Identities = 57/234 (24%), Positives = 87/234 (37%)
Query: 172 FSGHLTEGFAMDWSSTEPGVLATGD-CKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQ 230
F H +DW S + D C IH+ + G + K GHTN ++
Sbjct: 304 FPFHSAPALDVDWQSNNTFASCSTDMC---IHVC---KLGQDR-PIKTFQGHTNEVNAIK 356
Query: 231 WSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLAT 290
W L + D L + K+ + H E + + WS T PG T
Sbjct: 357 WDPTGNLLASCSDDMTLKIWSMKQDNC-------VHDLQAHNKEIYTIKWSPTGPG---T 406
Query: 291 GDCKRNIHIWTPR---EAGAWQVDQ----KPLVGHTNSVEDLQWSPGEKRVLASCSVDLS 343
+ N+ + + W VD+ L H V + +SP + R LAS S D
Sbjct: 407 NNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSP-DGRYLASGSFDKC 465
Query: 344 IRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRR 397
+ IW NT++ L T + + WN + + DG + V DLR+
Sbjct: 466 VHIW-----NTQTGALVHSYRGTGGIFEVCWNAAGDKVGASASDGSVCVLDLRK 514
>RGD|1560053 [details] [associations]
symbol:Tbl1xr1 "transducin (beta)-like 1 X-linked receptor 1"
species:10116 "Rattus norvegicus" [GO:0000118 "histone deacetylase
complex" evidence=IEA;ISO] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003714 "transcription corepressor
activity" evidence=IEA;ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005876
"spindle microtubule" evidence=IEA;ISO] [GO:0008013 "beta-catenin
binding" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0017053 "transcriptional repressor complex"
evidence=IEA;ISO] [GO:0042393 "histone binding" evidence=IEA;ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA;ISO] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0047485
"protein N-terminus binding" evidence=IEA;ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 RGD:1560053 GO:GO:0017053 GO:GO:0003714
GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513
GO:GO:0060070 GO:GO:0005876 EMBL:CH473961 GO:GO:0000118
GeneTree:ENSGT00690000102024 KO:K04508 CTD:79718 OrthoDB:EOG412M5M
IPI:IPI00367976 RefSeq:NP_001102411.1 UniGene:Rn.140831
Ensembl:ENSRNOT00000015573 GeneID:365755 KEGG:rno:365755
UCSC:RGD:1560053 NextBio:687981 Uniprot:D3ZNF4
Length = 514
Score = 178 (67.7 bits), Expect = 4.3e-10, P = 4.3e-10
Identities = 70/270 (25%), Positives = 115/270 (42%)
Query: 180 FAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQ 239
FA+ W+ +L+ G K I IW A Q Q P H+ A D+ W T
Sbjct: 270 FALKWNKKGNFILSAGVDKTTI-IWDAHTGEAKQ--QFPF--HSAPALDVDWQSNNTFAS 324
Query: 240 TVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHI 299
D + H K G+ P+ +F GH E A+ W T +LA+ + I
Sbjct: 325 CSTD---MCIHVCKLGQDR-----PIKTFQGHTNEVNAIKWDPTG-NLLASCSDDMTLKI 375
Query: 300 WTPREAGAWQVDQKPLVGHTNSVEDLQWSP---GEKR-----VLASCSVDLSIRIWDTRV 351
W+ ++ D L H + ++WSP G +LAS S D ++R+WD
Sbjct: 376 WSMKQDNCVH-D---LQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWD--- 428
Query: 352 INTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHT 411
++ C+ TL H V ++++ + SG D C+H+W+ + G+ V +++ T
Sbjct: 429 VDRGICIHTLTK-HQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQT---GALVHSYRG-T 483
Query: 412 APVTTVEWHPTESSTFASGGADDQIALWDL 441
+ V W+ AS +D + + DL
Sbjct: 484 GGIFEVCWNAAGDKVGASA-SDGSVCVLDL 512
Score = 168 (64.2 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 74/289 (25%), Positives = 109/289 (37%)
Query: 164 IPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHT 223
IP GH +E F W+ +LA+G IW E Q L H
Sbjct: 157 IPPNKAVVLRGHESEVFICAWNPVSD-LLASGSGDSTARIWNLSENSTSGPTQLVLR-HC 214
Query: 224 --NSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSG-HLTEGFAMDW 280
+D+ + T+L + LA + L S G H FA+ W
Sbjct: 215 IREGGQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIWTKDGNLASTLGQHKGPIFALKW 274
Query: 281 SSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSV 340
+ +L+ G K I IW A Q Q P H+ D+ W ASCS
Sbjct: 275 NKKGNFILSAGVDKTTI-IWDAHTGEAKQ--QFPF--HSAPALDVDWQ--SNNTFASCST 327
Query: 341 DLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKK 400
D+ I + + + T HT++VN I W+ T L+ S DD + +W + K+
Sbjct: 328 DMCIHVCK---LGQDRPIKTF-QGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSM---KQ 380
Query: 401 GSSVATFKHHTAPVTTVEWHPTESST--------FASGGADDQIALWDL 441
+ V + H + T++W PT T AS D + LWD+
Sbjct: 381 DNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDV 429
Score = 124 (48.7 bits), Expect = 0.00033, P = 0.00033
Identities = 57/234 (24%), Positives = 87/234 (37%)
Query: 172 FSGHLTEGFAMDWSSTEPGVLATGD-CKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQ 230
F H +DW S + D C IH+ + G + K GHTN ++
Sbjct: 304 FPFHSAPALDVDWQSNNTFASCSTDMC---IHVC---KLGQDR-PIKTFQGHTNEVNAIK 356
Query: 231 WSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLAT 290
W L + D L + K+ + H E + + WS T PG T
Sbjct: 357 WDPTGNLLASCSDDMTLKIWSMKQDNC-------VHDLQAHNKEIYTIKWSPTGPG---T 406
Query: 291 GDCKRNIHIWTPR---EAGAWQVDQ----KPLVGHTNSVEDLQWSPGEKRVLASCSVDLS 343
+ N+ + + W VD+ L H V + +SP + R LAS S D
Sbjct: 407 NNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSP-DGRYLASGSFDKC 465
Query: 344 IRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRR 397
+ IW NT++ L T + + WN + + DG + V DLR+
Sbjct: 466 VHIW-----NTQTGALVHSYRGTGGIFEVCWNAAGDKVGASASDGSVCVLDLRK 514
>UNIPROTKB|B4MU54 [details] [associations]
symbol:GK23981 "Ribosome biogenesis protein WDR12 homolog"
species:7260 "Drosophila willistoni" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972 Pfam:PF08154
EMBL:CH963852 KO:K14863 OMA:LQTRFFT OrthoDB:EOG4BNZTB
HAMAP:MF_03029 RefSeq:XP_002064657.1 ProteinModelPortal:B4MU54
STRING:B4MU54 EnsemblMetazoa:FBtr0254632 GeneID:6641752
KEGG:dwi:Dwil_GK23981 FlyBase:FBgn0225943 InParanoid:B4MU54
Uniprot:B4MU54
Length = 423
Score = 156 (60.0 bits), Expect = 5.1e-10, Sum P(2) = 5.1e-10
Identities = 53/162 (32%), Positives = 76/162 (46%)
Query: 280 WSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCS 339
WS+ E A GD + P+E G + L GH S+ +QW + L + S
Sbjct: 222 WSAAEDD--AGGDAASSKR---PKENGV-RTPIMTLQGHRESISAVQWI--DTSTLLTTS 273
Query: 340 VDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFK 399
D +++IWD + K+ + T N D + + NR LIV+ D + ++D R
Sbjct: 274 WDHTMKIWDLSLEGIKTEIST--NKSIFDASYSNLNR---LIVTASADKNLRLYDPRT-N 327
Query: 400 KGSSVA-TFKHHTAPVTTVEWHPTESSTFASGGADDQIALWD 440
+GS V T+ H A V TV W TE F SG D+Q LWD
Sbjct: 328 QGSIVRNTYLGHNAWVQTVMWSTTEEFLFVSGAYDNQNKLWD 369
Score = 120 (47.3 bits), Expect = 0.00066, P = 0.00066
Identities = 48/193 (24%), Positives = 84/193 (43%)
Query: 206 PREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTV-DDPFQLAEHNKKRGKGPGIPTPP 264
P+E G + L GH S +QW D T L T D ++ + + + GI T
Sbjct: 239 PKENGV-RTPIMTLQGHRESISAVQWIDTSTLLTTSWDHTMKIWDLSLE-----GIKTE- 291
Query: 265 LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVED 324
S + + F +S+ ++ T +N+ ++ PR + + +GH V+
Sbjct: 292 -ISTNKSI---FDASYSNLNR-LIVTASADKNLRLYDPR-TNQGSIVRNTYLGHNAWVQT 345
Query: 325 LQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSG 384
+ WS E+ + S + D ++WD R + K+ + L H V I W+ + I SG
Sbjct: 346 VMWSTTEEFLFVSGAYDNQNKLWDCR--SPKAPLYDLLG-HGEKVLDIDWSNPK-YICSG 401
Query: 385 GDDGCIHVWDLRR 397
G D + V+ R+
Sbjct: 402 GADNTVRVFKSRK 414
Score = 66 (28.3 bits), Expect = 5.1e-10, Sum P(2) = 5.1e-10
Identities = 13/46 (28%), Positives = 23/46 (50%)
Query: 645 PTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAG 690
P PL+ GH + +DWS+ P + +G + ++ R+AG
Sbjct: 373 PKAPLYDLLGHGEKVLDIDWSN--PKYICSGGADNTVRVFKSRKAG 416
>UNIPROTKB|Q5ZIU8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 HOGENOM:HOG000008039
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 EMBL:DQ410670
EMBL:AJ720686 IPI:IPI00822740 RefSeq:NP_001025730.1
UniGene:Gga.7972 ProteinModelPortal:Q5ZIU8 GeneID:415631
KEGG:gga:415631 CTD:10300 HOVERGEN:HBG052294 NextBio:20819203
Uniprot:Q5ZIU8
Length = 657
Score = 179 (68.1 bits), Expect = 5.1e-10, Sum P(2) = 5.1e-10
Identities = 42/135 (31%), Positives = 70/135 (51%)
Query: 307 AWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHT 366
AW++ + +V H+++V L R+LA+ D + +W +N +C+++L HT
Sbjct: 10 AWKLQE--IVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWS---VNKPNCVMSL-TGHT 63
Query: 367 SDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESST 426
+ + + + E LIV+G G I VWDL K + T H A + ++++HP S
Sbjct: 64 TPIESLQISAKEELIVAGSQSGSIRVWDLEAAK---ILRTLLGHKANICSLDFHPY-GSF 119
Query: 427 FASGGADDQIALWDL 441
ASG D I LWD+
Sbjct: 120 VASGSLDTDIKLWDV 134
Score = 160 (61.4 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 47/157 (29%), Positives = 75/157 (47%)
Query: 287 VLATG--DCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSI 344
+LATG DC+ +++W+ + L GHT +E LQ S E+ ++A S SI
Sbjct: 35 LLATGGDDCR--VNVWSVNKPNCVM----SLTGHTTPIESLQISAKEELIVAG-SQSGSI 87
Query: 345 RIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSV 404
R+WD +L H +++ + ++ + SG D I +WD+RR KG +
Sbjct: 88 RVWDLEAAKILRTLL----GHKANICSLDFHPYGSFVASGSLDTDIKLWDVRR--KGC-I 140
Query: 405 ATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDL 441
+K HT V + + P + AS D + LWDL
Sbjct: 141 FKYKSHTQAVRCLRFSP-DGKWLASAADDHTVKLWDL 176
Score = 150 (57.9 bits), Expect = 7.1e-07, P = 7.1e-07
Identities = 49/190 (25%), Positives = 86/190 (45%)
Query: 288 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIW 347
+A+G +I +W R G K HT +V L++SP K LAS + D ++++W
Sbjct: 120 VASGSLDTDIKLWDVRRKGCI-FKYK---SHTQAVRCLRFSPDGKW-LASAADDHTVKLW 174
Query: 348 DTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATF 407
D + M H+ VNV+ ++ +E L+ SG D I WDL +F V+
Sbjct: 175 D---LTAGKVMFEF-TGHSGPVNVVEFHPSEYLLASGSSDRTIRFWDLEKFHV---VSCI 227
Query: 408 KHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQ----REAELKDLPSQL 463
+ PV + ++P + GG D + ++ ER ++ + A+L +QL
Sbjct: 228 EEEATPVRCILFNPDGCCLY--GGFQDSLRVYGWEPERCFDVVVVNWGKVADLSVCHNQL 285
Query: 464 LFIHLGQKEI 473
+ + Q +
Sbjct: 286 IGVSFAQSTV 295
Score = 48 (22.0 bits), Expect = 5.1e-10, Sum P(2) = 5.1e-10
Identities = 11/36 (30%), Positives = 19/36 (52%)
Query: 649 LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIW 684
+F F+GH +++ +E +LA+G R I W
Sbjct: 182 MFEFTGHSGPVNVVEFHPSEY-LLASGSSDRTIRFW 216
>UNIPROTKB|E3W9A3 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0000922
"spindle pole" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IEA]
[GO:0008568 "microtubule-severing ATPase activity" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0031117 "positive regulation
of microtubule depolymerization" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005886 GO:GO:0005813
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0008352
PANTHER:PTHR19845 IPI:IPI00822740 OMA:NAISRTP GO:GO:0031117
EMBL:AADN02065753 EMBL:AADN02065752 ProteinModelPortal:E3W9A3
Ensembl:ENSGALT00000040450 ArrayExpress:E3W9A3 Uniprot:E3W9A3
Length = 661
Score = 179 (68.1 bits), Expect = 5.1e-10, P = 5.1e-10
Identities = 42/135 (31%), Positives = 70/135 (51%)
Query: 307 AWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHT 366
AW++ + +V H+++V L R+LA+ D + +W +N +C+++L HT
Sbjct: 10 AWKLQE--IVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWS---VNKPNCVMSL-TGHT 63
Query: 367 SDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESST 426
+ + + + E LIV+G G I VWDL K + T H A + ++++HP S
Sbjct: 64 TPIESLQISAKEELIVAGSQSGSIRVWDLEAAK---ILRTLLGHKANICSLDFHPY-GSF 119
Query: 427 FASGGADDQIALWDL 441
ASG D I LWD+
Sbjct: 120 VASGSLDTDIKLWDV 134
Score = 166 (63.5 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 51/177 (28%), Positives = 82/177 (46%)
Query: 265 LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVED 324
+ S +GH T ++ S+ E ++A G +I +W + A ++ + L+GH ++
Sbjct: 56 VMSLTGHTTPIESLQISAKEELIVA-GSQSGSIRVW---DLEAAKI-LRTLLGHKANICS 110
Query: 325 LQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSG 384
L + P V AS S+D I++WD R K C+ +HT V + ++ + S
Sbjct: 111 LDFHPYGSFV-ASGSLDTDIKLWDVR---RKGCIFKY-KSHTQAVRCLRFSPDGKWLASA 165
Query: 385 GDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDL 441
DD + +WDL G + F H PV VE+HP+E A I WDL
Sbjct: 166 ADDHTVKLWDLTA---GKVMFEFTGHYGPVNVVEFHPSEYP-LAGSPVHRTIRFWDL 218
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 173 (66.0 bits), Expect = 5.4e-10, P = 5.4e-10
Identities = 50/176 (28%), Positives = 82/176 (46%)
Query: 266 FSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVD-QKPLVGHTNSVED 324
++ GHL ++ +S + LA+ + I IW GA+ ++ L GH + D
Sbjct: 40 YTLKGHLKSISSVKFSP-DGKWLASASADKTIKIW-----GAYDGKFERTLEGHKEGISD 93
Query: 325 LQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSG 384
+ WS K ++ S S D +I+IWD + + + TL H V +S+N LIVSG
Sbjct: 94 IAWSQDSK-LICSASDDKTIKIWD---VESGKMVKTL-KGHKEYVFGVSFNPQSNLIVSG 148
Query: 385 GDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWD 440
D + +WD+ G H+ PVT V ++ + + SG D + +WD
Sbjct: 149 SFDENVRIWDVNT---GECTKMISAHSDPVTGVHFN-RDGTLVVSGSYDGTVRIWD 200
Score = 167 (63.8 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 51/174 (29%), Positives = 84/174 (48%)
Query: 267 SFSGHLTEGFA-MDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDL 325
+ GH EG + + WS + + D K I IW E+G K L GH V +
Sbjct: 83 TLEGH-KEGISDIAWSQDSKLICSASDDK-TIKIWDV-ESGKMV---KTLKGHKEYVFGV 136
Query: 326 QWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGG 385
++P + ++ S S D ++RIWD +NT C + +AH+ V + +NR L+VSG
Sbjct: 137 SFNP-QSNLIVSGSFDENVRIWD---VNTGECTKMI-SAHSDPVTGVHFNRDGTLVVSGS 191
Query: 386 DDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALW 439
DG + +WD + ++++T V+ V++ P A G D+ + LW
Sbjct: 192 YDGTVRIWDTTTGQLLNTIST--EDGKEVSFVKFSPNGKFVLA-GTLDNTLRLW 242
Score = 166 (63.5 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 43/127 (33%), Positives = 66/127 (51%)
Query: 315 LVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISW 374
L GH S+ +++SP K LAS S D +I+IW + K TL H ++ I+W
Sbjct: 42 LKGHLKSISSVKFSPDGKW-LASASADKTIKIWGA--YDGKF-ERTL-EGHKEGISDIAW 96
Query: 375 NRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADD 434
++ LI S DD I +WD+ + G V T K H V V ++P +S+ SG D+
Sbjct: 97 SQDSKLICSASDDKTIKIWDV---ESGKMVKTLKGHKEYVFGVSFNP-QSNLIVSGSFDE 152
Query: 435 QIALWDL 441
+ +WD+
Sbjct: 153 NVRIWDV 159
>WB|WBGene00003047 [details] [associations]
symbol:lis-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040025
"vulval development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0035046 "pronuclear migration" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007100 "mitotic
centrosome separation" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] [GO:0051026 "chiasma
assembly" evidence=IMP] [GO:0043652 "engulfment of apoptotic cell"
evidence=IMP] [GO:0051932 "synaptic transmission, GABAergic"
evidence=IGI;IMP] [GO:0048489 "synaptic vesicle transport"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005938
"cell cortex" evidence=IDA] [GO:0005818 "aster" evidence=IDA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005874 "microtubule"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0009792 GO:GO:0000132 GO:GO:0035046 GO:GO:0048471
GO:GO:0007399 GO:GO:0030154 GO:GO:0000776 GO:GO:0051301
GO:GO:0007052 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0048477
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0048489
GO:GO:0005874 GO:GO:0040025 GO:GO:0043652 GO:GO:0005818
GO:GO:0007018 GO:GO:0000777 GO:GO:0051026 GO:GO:0051932 EMBL:Z81113
GO:GO:0007100 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AF164430 PIR:T24399
RefSeq:NP_499755.1 UniGene:Cel.19492 ProteinModelPortal:Q9NDC9
SMR:Q9NDC9 IntAct:Q9NDC9 STRING:Q9NDC9 PaxDb:Q9NDC9
EnsemblMetazoa:T03F6.5 GeneID:176758 KEGG:cel:CELE_T03F6.5
UCSC:T03F6.5 CTD:36791 WormBase:T03F6.5 InParanoid:Q9NDC9
NextBio:893884 Uniprot:Q9NDC9
Length = 404
Score = 174 (66.3 bits), Expect = 7.1e-10, P = 7.1e-10
Identities = 73/261 (27%), Positives = 116/261 (44%)
Query: 207 REAGAWQVDQKPLGG----HTNSAEDLQW--SDLKTALQTVDDPFQL-AEHNKKRGKGPG 259
+E+ + D KPLGG + LQ +DL++ LQ A KR
Sbjct: 33 KESSLSENDIKPLGGILEKKWTTVLRLQRKVNDLESKLQESQREINHGAPTRDKRQAADW 92
Query: 260 IPTPP-LFSFSGH---LTEG-FAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKP 314
IP PP +GH +T F W+ ++A+ I +W E G Q++ +
Sbjct: 93 IPRPPETQKLTGHRLPITRVIFHPLWT-----IMASCSEDATIKVWD-YETG--QLE-RT 143
Query: 315 LVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISW 374
L GHT++V D+ K+ L SCS DLSI++WD T C+ +L H V+ +++
Sbjct: 144 LKGHTDAVNDIAIDAAGKQ-LVSCSSDLSIKLWDFG--QTYDCLKSL-KGHEHTVSSVTF 199
Query: 375 NRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADD 434
T ++S D I WD+ G V TF+ H V + + + FAS D
Sbjct: 200 LPTGDFVLSASRDHTIKQWDI---STGYCVYTFRGHNDWVRMIRIS-NDGTLFASASLDQ 255
Query: 435 QIALWDLAVERDSEIEQREAE 455
+ +W A + +++ R+ E
Sbjct: 256 TVTVWSFAT-KSAKLVLRDHE 275
Score = 119 (46.9 bits), Expect = 0.00078, P = 0.00078
Identities = 47/190 (24%), Positives = 87/190 (45%)
Query: 265 LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVED 324
+++F GH + M S + + A+ + + +W+ A V L H ++VE
Sbjct: 226 VYTFRGH-NDWVRMIRISNDGTLFASASLDQTVTVWSFATKSAKLV----LRDHEHAVEC 280
Query: 325 LQWSP--------GEK------RVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVN 370
++W+P G++ +L S S D SI+ W+ INT + TL AH + V
Sbjct: 281 VEWAPDTAYTNVTGQQPEGNSTHILFSGSRDRSIKAWN---INTGDVLFTLL-AHENWVR 336
Query: 371 VISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASG 430
++++ ++S DD + VW+L + ++ +H V+TV +H T S +G
Sbjct: 337 GLAFHPKGKYLISVADDKTLRVWELSAQRCMKAIEAHEHF---VSTVAFHQT-SPFVITG 392
Query: 431 GADDQIALWD 440
D +W+
Sbjct: 393 SVDMSCKVWE 402
>UNIPROTKB|D6RFX4 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9606 "Homo sapiens" [GO:0008200 "ion channel
inhibitor activity" evidence=IEA] [GO:0015935 "small ribosomal
subunit" evidence=IEA] [GO:0017148 "negative regulation of
translation" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0090003
"regulation of establishment of protein localization to plasma
membrane" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0017148 GO:GO:0043025 GO:GO:0030425
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008200
HOGENOM:HOG000091643 ChiTaRS:GNB2L1 HGNC:HGNC:4399 GO:GO:0015935
EMBL:AC008443 IPI:IPI00966041 ProteinModelPortal:D6RFX4 SMR:D6RFX4
Ensembl:ENST00000507000 UCSC:uc010jls.3 ArrayExpress:D6RFX4
Bgee:D6RFX4 Uniprot:D6RFX4
Length = 194
Score = 153 (58.9 bits), Expect = 7.4e-10, P = 7.4e-10
Identities = 58/188 (30%), Positives = 87/188 (46%)
Query: 259 GIPTPPLFSFSGHLTEGFAMDWSSTEPGVLA-TGDCKRNIHIWTPREAGAWQVDQKPLVG 317
GIP L GH F D + G A +G + +W G + VG
Sbjct: 12 GIPQRAL---RGH--SHFVSDVVISSDGQFALSGSWDGTLRLWD-LTTGT---TTRRFVG 62
Query: 318 HTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPN-AHTSDVNVISW-- 374
HT V + +S + R + S S D +I++W+T + C T+ + +H+ V+ + +
Sbjct: 63 HTKDVLSVAFS-SDNRQIVSGSRDKTIKLWNTLGV----CKYTVQDESHSEWVSCVRFSP 117
Query: 375 NRTEPLIVSGGDDGCIHVWDLRRFK-KGSSVATFKHHTAPVTTVEWHPTESSTFASGGAD 433
N + P+IVS G D + VW+L K K + + HT + TV P + S ASGG D
Sbjct: 118 NSSNPIIVSCGWDKLVKVWNLANCKLKTNHIG----HTGYLNTVTVSP-DGSLCASGGKD 172
Query: 434 DQIALWDL 441
Q LWDL
Sbjct: 173 GQAMLWDL 180
Score = 116 (45.9 bits), Expect = 0.00024, P = 0.00024
Identities = 33/134 (24%), Positives = 60/134 (44%)
Query: 268 FSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQW 327
F GH + ++ +SS +++ G + I +W + V + H+ V +++
Sbjct: 60 FVGHTKDVLSVAFSSDNRQIVS-GSRDKTIKLWNTLGVCKYTVQDE---SHSEWVSCVRF 115
Query: 328 SPGEKR-VLASCSVDLSIRIWDTRVINTKSCMLTLPN-AHTSDVNVISWNRTEPLIVSGG 385
SP ++ SC D +++W N +C L + HT +N ++ + L SGG
Sbjct: 116 SPNSSNPIIVSCGWDKLVKVW-----NLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGG 170
Query: 386 DDGCIHVWDLRRFK 399
DG +WDL K
Sbjct: 171 KDGQAMLWDLNEGK 184
Score = 112 (44.5 bits), Expect = 0.00076, P = 0.00076
Identities = 39/146 (26%), Positives = 68/146 (46%)
Query: 299 IWT-PREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSC 357
+W R+ + + Q+ L GH++ V D+ S + L+ S D ++R+WD T
Sbjct: 1 MWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSG-SWDGTLRLWDLTTGTTTRR 59
Query: 358 MLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTV 417
+ HT DV ++++ IVSG D I +W+ K + + H+ V+ V
Sbjct: 60 FV----GHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYT--VQDESHSEWVSCV 113
Query: 418 EWHPTESSTF-ASGGADDQIALWDLA 442
+ P S+ S G D + +W+LA
Sbjct: 114 RFSPNSSNPIIVSCGWDKLVKVWNLA 139
>UNIPROTKB|B5DG67 [details] [associations]
symbol:wdr12 "Ribosome biogenesis protein wdr12"
species:8030 "Salmo salar" [GO:0000463 "maturation of LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS] [GO:0005730
"nucleolus" evidence=ISS] [GO:0008283 "cell proliferation"
evidence=ISS] [GO:0030687 "preribosome, large subunit precursor"
evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 GO:GO:0000466
InterPro:IPR012972 Pfam:PF08154 HAMAP:MF_03029 EMBL:BT043626
ProteinModelPortal:B5DG67 Uniprot:B5DG67
Length = 423
Score = 174 (66.3 bits), Expect = 7.9e-10, P = 7.9e-10
Identities = 60/219 (27%), Positives = 101/219 (46%)
Query: 231 WSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLAT 290
WS + T + ++ K++ + G+ PL + SGH ++ W +E A+
Sbjct: 216 WSAVATEEEEEEEEPPSRPRKKQKTEQLGLTRTPLMTLSGHNEAVSSVLWLDSEEICSAS 275
Query: 291 GDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTR 350
D I +W E G+ + L G + + +SP +R LAS S D +R+WD R
Sbjct: 276 WD--HTIRLWDA-ETGSVKTS---LTG-SKVFNHISYSPLCRR-LASGSTDRHVRLWDPR 327
Query: 351 VINTKSCMLTLPNAHTSDVNVISWNRT-EPLIVSGGDDGCIHVWDLRRFKKGSSVATFKH 409
+ +L+L +H+ V + W + E +VSG D + +WD R K + +
Sbjct: 328 SKDGSLVLLSL-TSHSGWVTAVKWAPSHEHQLVSGSLDNLVKLWDTRSCK--APLYDVSA 384
Query: 410 HTAPVTTVEWHPTESSTFASGGADDQIALWDL-AVERDS 447
H V V+W T+S SGGAD+++ + A E D+
Sbjct: 385 HEDKVLCVDW--TDSRLMLSGGADNKLYTYRYTACETDA 421
Score = 156 (60.0 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 76/283 (26%), Positives = 110/283 (38%)
Query: 183 DW-SSTEPGV--LATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQW--SDLKTA 237
DW SS E + TG + IW+ V GHT+ +D+ W D T+
Sbjct: 102 DWISSVEADSEWILTGSYDKTAKIWSLEGKAVMTV-----AGHTDVVKDVAWVKRDGLTS 156
Query: 238 L---QTVDDPFQLAEHNKKRGK--------GPG-----IPTPPLFS-FSGHLTEGFAMDW 280
L ++D L E N +R K G I T P + F + W
Sbjct: 157 LLLTASLDQTILLWEWNSERNKLKARHCCRGHAGSVDTIATDPTRTKFCSGSWDKMLKIW 216
Query: 281 SS--TEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASC 338
S+ TE R + G + L GH +V + W E+ + S
Sbjct: 217 SAVATEEEEEEEEPPSRPRKKQKTEQLGLTRTPLMTLSGHNEAVSSVLWLDSEE--ICSA 274
Query: 339 SVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRF 398
S D +IR+WD T S +L + N IS++ + SG D + +WD R
Sbjct: 275 SWDHTIRLWDAE---TGSVKTSLTGSKV--FNHISYSPLCRRLASGSTDRHVRLWDPRS- 328
Query: 399 KKGSSVA-TFKHHTAPVTTVEWHPTESSTFASGGADDQIALWD 440
K GS V + H+ VT V+W P+ SG D+ + LWD
Sbjct: 329 KDGSLVLLSLTSHSGWVTAVKWAPSHEHQLVSGSLDNLVKLWD 371
Score = 43 (20.2 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 11/44 (25%), Positives = 19/44 (43%)
Query: 648 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGA 691
PL+ S H + +DW+ + + D K + +T E A
Sbjct: 378 PLYDVSAHEDKVLCVDWTDSRLMLSGGADNKLYTYRYTACETDA 421
>UNIPROTKB|B4JPT9 [details] [associations]
symbol:GH13339 "Ribosome biogenesis protein WDR12 homolog"
species:7222 "Drosophila grimshawi" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CH916372 GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972
Pfam:PF08154 KO:K14863 OMA:LQTRFFT OrthoDB:EOG4BNZTB HAMAP:MF_03029
RefSeq:XP_001992994.1 ProteinModelPortal:B4JPT9 STRING:B4JPT9
EnsemblMetazoa:FBtr0148753 GeneID:6566798 KEGG:dgr:Dgri_GH13339
FlyBase:FBgn0120815 InParanoid:B4JPT9 Uniprot:B4JPT9
Length = 419
Score = 159 (61.0 bits), Expect = 9.4e-10, Sum P(2) = 9.4e-10
Identities = 47/139 (33%), Positives = 68/139 (48%)
Query: 303 REAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLP 362
+E+G + + L GH S+ +QW G L + S D ++++WD + K+ + T
Sbjct: 236 KESGV-RTPKMTLQGHRESISAVQWMDGT--TLLTGSWDHTLKVWDLNLEGIKTEIST-- 290
Query: 363 NAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVA-TFKHHTAPVTTVEWHP 421
N D N NR LIV+ D + ++D R +GS V T+ H A V TV W
Sbjct: 291 NKSIFDANFSKLNR---LIVTASADKNLRLYDPRT-NQGSVVRNTYLGHNAWVQTVMWST 346
Query: 422 TESSTFASGGADDQIALWD 440
TE F SG D+Q LWD
Sbjct: 347 TEEFLFVSGSYDNQNKLWD 365
Score = 151 (58.2 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 50/192 (26%), Positives = 82/192 (42%)
Query: 249 EHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAW 308
E + KR K G+ TP + + GH A+ W + L TG + +W G
Sbjct: 229 EGSAKRAKESGVRTPKM-TLQGHRESISAVQWM--DGTTLLTGSWDHTLKVWDLNLEGI- 284
Query: 309 QVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSD 368
K + S+ D +S R++ + S D ++R++D R N S + H +
Sbjct: 285 ----KTEISTNKSIFDANFSK-LNRLIVTASADKNLRLYDPRT-NQGSVVRNTYLGHNAW 338
Query: 369 VNVISWNRTEP-LIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTF 427
V + W+ TE L VSG D +WD R K + + H V ++W +
Sbjct: 339 VQTVMWSTTEEFLFVSGSYDNQNKLWDCRSPK--APLYDLLGHGEKVLDIDW--SNPKYI 394
Query: 428 ASGGADDQIALW 439
SGGAD+ + ++
Sbjct: 395 VSGGADNTVRVF 406
Score = 124 (48.7 bits), Expect = 0.00024, P = 0.00024
Identities = 50/192 (26%), Positives = 86/192 (44%)
Query: 207 REAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQ-TVDDPFQLAEHNKKRGKGPGIPTPPL 265
+E+G + + L GH S +QW D T L + D ++ + N + GI T
Sbjct: 236 KESGV-RTPKMTLQGHRESISAVQWMDGTTLLTGSWDHTLKVWDLNLE-----GIKTE-- 287
Query: 266 FSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDL 325
S + + F ++S ++ T +N+ ++ PR V + +GH V+ +
Sbjct: 288 ISTNKSI---FDANFSKLNR-LIVTASADKNLRLYDPR-TNQGSVVRNTYLGHNAWVQTV 342
Query: 326 QWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGG 385
WS E+ + S S D ++WD R + K+ + L H V I W+ + IVSGG
Sbjct: 343 MWSTTEEFLFVSGSYDNQNKLWDCR--SPKAPLYDLLG-HGEKVLDIDWSNPK-YIVSGG 398
Query: 386 DDGCIHVWDLRR 397
D + V+ R+
Sbjct: 399 ADNTVRVFKSRK 410
Score = 60 (26.2 bits), Expect = 9.4e-10, Sum P(2) = 9.4e-10
Identities = 12/45 (26%), Positives = 22/45 (48%)
Query: 645 PTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREA 689
P PL+ GH + +DWS+ P + +G + ++ R+A
Sbjct: 369 PKAPLYDLLGHGEKVLDIDWSN--PKYIVSGGADNTVRVFKSRKA 411
>SGD|S000002675 [details] [associations]
symbol:CIA1 "Component of cytosolic iron-sulfur protein
assembly (CIA) machinery" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0000055 "ribosomal
large subunit export from nucleus" evidence=IMP] [GO:0016226
"iron-sulfur cluster assembly" evidence=IGI;IMP] [GO:0005737
"cytoplasm" evidence=IEA;IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0002098 "tRNA
wobble uridine modification" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000002675 GO:GO:0005829
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BK006938 GO:GO:0016226 EMBL:U51030 GO:GO:0002098 GO:GO:0000055
HOGENOM:HOG000208901 GeneTree:ENSGT00700000104486 OMA:TAIWENI
OrthoDB:EOG4CVKH5 PIR:S70127 RefSeq:NP_010553.3 RefSeq:NP_010559.3
PDB:2HES PDBsum:2HES ProteinModelPortal:Q05583 SMR:Q05583
DIP:DIP-1836N IntAct:Q05583 MINT:MINT-405749 STRING:Q05583
PaxDb:Q05583 PeptideAtlas:Q05583 EnsemblFungi:YDR267C GeneID:851860
GeneID:851866 KEGG:sce:YDR267C KEGG:sce:YDR273W CYGD:YDR267c
EvolutionaryTrace:Q05583 NextBio:969800 Genevestigator:Q05583
GermOnline:YDR267C Uniprot:Q05583
Length = 330
Score = 168 (64.2 bits), Expect = 9.8e-10, Sum P(2) = 9.8e-10
Identities = 45/172 (26%), Positives = 80/172 (46%)
Query: 287 VLATGDCKRNIHIWTPREAG--AWQVDQKPLV-GHTNSVEDLQWSPGEKRVLASCSVDLS 343
+LA G + IW E+ +++D ++ GH N V+ + WS + LA+CS D S
Sbjct: 72 LLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWS-NDGYYLATCSRDKS 130
Query: 344 IRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKG-S 402
+ IW+T + +++ H+ DV + W+ +E L+ S D + +W + +
Sbjct: 131 VWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIW--KDYDDDWE 188
Query: 403 SVATFKHHTAPVTTVEWHPTESSTFASGGADDQ-IALWDLAVERDSEIEQRE 453
VA H V + ++ TE G+DD + +W D E +Q+E
Sbjct: 189 CVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYM--GDDEDDQQE 238
Score = 151 (58.2 bits), Expect = 8.9e-08, Sum P(2) = 8.9e-08
Identities = 38/165 (23%), Positives = 74/165 (44%)
Query: 280 WS-STEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASC 338
WS G+LATG R I + + + +D H ++ + W P +LA+
Sbjct: 18 WSFDFSQGILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRP-HTSLLAAG 76
Query: 339 SVDLSIRIW--DTRVINT-KSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDL 395
S D ++ IW + T + +L + H ++V ++W+ + + D + +W+
Sbjct: 77 SFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWET 136
Query: 396 RRF-KKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALW 439
++ ++ + H+ V V WHP+E+ AS DD + +W
Sbjct: 137 DESGEEYECISVLQEHSQDVKHVIWHPSEA-LLASSSYDDTVRIW 180
Score = 149 (57.5 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 54/213 (25%), Positives = 86/213 (40%)
Query: 184 WS-STEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVD 242
WS G+LATG R I + + + +D H + + W + L
Sbjct: 18 WSFDFSQGILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGS 77
Query: 243 DPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTP 302
++ K+ L GH E + WS+ + LAT +++ IW
Sbjct: 78 FDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSN-DGYYLATCSRDKSVWIWET 136
Query: 303 REAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLP 362
E+G L H+ V+ + W P E +LAS S D ++RIW + C+ L
Sbjct: 137 DESGEEYECISVLQEHSQDVKHVIWHPSEA-LLASSSYDDTVRIWKD-YDDDWECVAVL- 193
Query: 363 NAHTSDVNVISWNRTEPL--IVSGGDDGCIHVW 393
N H V +++TE + + SG DD + VW
Sbjct: 194 NGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVW 226
Score = 123 (48.4 bits), Expect = 0.00020, P = 0.00020
Identities = 63/265 (23%), Positives = 101/265 (38%)
Query: 191 VLATGDCKRNIHIWTPREAG--AWQVDQKPL-GGHTNSAEDLQWSDLKTALQTV--DDPF 245
+LA G + IW E+ +++D + GH N + + WS+ L T D
Sbjct: 72 LLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSV 131
Query: 246 QLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREA 305
+ E ++ G + H + + W +E +LA+ + IW +
Sbjct: 132 WIWETDES-----GEEYECISVLQEHSQDVKHVIWHPSE-ALLASSSYDDTVRIWKDYDD 185
Query: 306 GAWQVDQKPLVGHTNSV--EDLQWSPGEKRVLASCSVDLSIRIW-----DTRVINTKSCM 358
W+ L GH +V D + G R L S S D ++R+W D C
Sbjct: 186 D-WEC-VAVLNGHEGTVWSSDFDKTEGVFR-LCSGSDDSTVRVWKYMGDDEDDQQEWVCE 242
Query: 359 LTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWD-LRRFKKGSSVATFKHHTAPVTTV 417
LP+ H V ++W LI S G DG + V++ + K + H + V
Sbjct: 243 AILPDVHKRQVYNVAWG-FNGLIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVV 301
Query: 418 EWHPTESSTFASGGADDQIA-LWDL 441
+W T + G DD I W L
Sbjct: 302 KWLELNGKTILATGGDDGIVNFWSL 326
Score = 45 (20.9 bits), Expect = 9.8e-10, Sum P(2) = 9.8e-10
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 590 INRVRTCQYGSTTLAGVWGEVGKVGIWDLKTA 621
IN V+ + T+ G+ G V W L+ A
Sbjct: 298 INVVKWLELNGKTILATGGDDGIVNFWSLEKA 329
>TAIR|locus:2010356 [details] [associations]
symbol:ATAN11 "AT1G12910" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=NAS] [GO:0043153 "entrainment of circadian clock by
photoperiod" evidence=IEP] [GO:0048573 "photoperiodism, flowering"
evidence=RCA;IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0009718 GO:GO:0048511 GO:GO:0044212
EMBL:AC012187 GO:GO:0048573 GO:GO:0043153 eggNOG:NOG314410
OMA:NKVQIVS HOGENOM:HOG000260968 KO:K11805 UniGene:At.23958
EMBL:U94746 EMBL:AY093101 EMBL:AY128776 EMBL:AY087676
IPI:IPI00520024 PIR:G86262 RefSeq:NP_172751.1 UniGene:At.62609
ProteinModelPortal:Q9LPV9 SMR:Q9LPV9 STRING:Q9LPV9 PaxDb:Q9LPV9
PRIDE:Q9LPV9 EnsemblPlants:AT1G12910.1 GeneID:837849
KEGG:ath:AT1G12910 GeneFarm:2811 TAIR:At1g12910 InParanoid:Q9LPV9
PhylomeDB:Q9LPV9 ProtClustDB:CLSN2682478 Genevestigator:Q9LPV9
Uniprot:Q9LPV9
Length = 346
Score = 171 (65.3 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 64/234 (27%), Positives = 96/234 (41%)
Query: 268 FSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWT-PREAGAWQVDQKPLVGHTNSVEDLQ 326
F G LT + DW+ EP + T IW REA VD + L+ H V D+
Sbjct: 134 FCGPLT---SFDWNEAEPRRIGTSSTDTTCTIWDIEREA----VDTQ-LIAHDKEVFDIA 185
Query: 327 WSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSG-- 384
W G V AS S D S+R++D R + + T V + WN+ +P ++
Sbjct: 186 W--GGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVR-LGWNKQDPRYMATII 242
Query: 385 GDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444
D + V D+R F V + H A V + W P S + G D Q +WD++
Sbjct: 243 MDSAKVVVLDIR-FP-ALPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDIS-- 298
Query: 445 RDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFR 498
S + E L P + + EI++L W P + ++ I R
Sbjct: 299 --SMGQHVEGGLD--P---ILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILR 345
>UNIPROTKB|Q5ZJW8 [details] [associations]
symbol:DTL "Denticleless protein homolog" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006260
"DNA replication" evidence=IEA] [GO:0005813 "centrosome"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0031572 "G2
DNA damage checkpoint" evidence=ISS] [GO:0031465 "Cul4B-RING
ubiquitin ligase complex" evidence=ISS] [GO:0031464 "Cul4A-RING
ubiquitin ligase complex" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0051726
"regulation of cell cycle" evidence=ISS] [GO:0019985 "translesion
synthesis" evidence=ISS] [GO:0009411 "response to UV" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0006513 "protein monoubiquitination" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0000209 "protein polyubiquitination" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0005737 GO:GO:0005813
GO:GO:0009411 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006511 GO:GO:0004842 GO:GO:0000209
GO:GO:0031572 GO:GO:0006513 GO:GO:0031464 GO:GO:0031465
GO:GO:0019985 HOVERGEN:HBG057737 KO:K11790 CTD:51514 EMBL:AJ720316
IPI:IPI00592297 RefSeq:NP_001026219.1 UniGene:Gga.20498
ProteinModelPortal:Q5ZJW8 STRING:Q5ZJW8 Ensembl:ENSGALT00000015990
GeneID:421373 KEGG:gga:421373 GeneTree:ENSGT00530000064210
HOGENOM:HOG000112290 InParanoid:Q5ZJW8 OMA:ICTYFHR
OrthoDB:EOG4N5VWH NextBio:20824150 Uniprot:Q5ZJW8
Length = 720
Score = 139 (54.0 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 45/165 (27%), Positives = 75/165 (45%)
Query: 238 LQTVDDPFQLAEHNKKRGKGP-GIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRN 296
LQ + D ++ + + G G+P PP F S F VLA + +
Sbjct: 21 LQHLLDGYRCSREDDHLSYGEIGMPVPP-FGCSFSAAPNFEH--------VLAVANEEGF 71
Query: 297 IHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKS 356
+ ++ ++ K H+N+V DL W PGE R++ + S D + ++WD R
Sbjct: 72 VRLYDTEAQNTTKLISKEWQAHSNAVFDLAWVPGEHRIVTA-SGDQTAKVWDVRAGE--- 127
Query: 357 CMLTLPNAHTSDVNVISWNRTEPLIV-SGGDDGCIHVWDLRRFKK 400
+L + H + ++++R E + +GG DG I VWD R KK
Sbjct: 128 -LLGICKGHQCSLKSVAFSRFEKAVFCTGGRDGNIMVWDTRCNKK 171
Score = 132 (51.5 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 33/113 (29%), Positives = 54/113 (47%)
Query: 328 SPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDD 387
+P + VLA + + +R++DT NT + AH++ V ++W E IV+ D
Sbjct: 56 APNFEHVLAVANEEGFVRLYDTEAQNTTKLISKEWQAHSNAVFDLAWVPGEHRIVTASGD 115
Query: 388 GCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWD 440
VWD+R G + K H + +V + E + F +GG D I +WD
Sbjct: 116 QTAKVWDVRA---GELLGICKGHQCSLKSVAFSRFEKAVFCTGGRDGNIMVWD 165
Score = 88 (36.0 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 699 NRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDR 758
++F V + DC N +IW E + + LVGH+ V + W P + +A+CS D
Sbjct: 326 DQFLVSGSSDC--NAYIWKVSEPS---LPPRILVGHSQEVTSIAWCPSDFTKIATCSDDN 380
Query: 759 SNRI 762
+ RI
Sbjct: 381 TVRI 384
Score = 39 (18.8 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 10/40 (25%), Positives = 17/40 (42%)
Query: 645 PTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIW 684
P+ P GH E ++ W ++ +AT + IW
Sbjct: 346 PSLPPRILVGHSQEVTSIAWCPSDFTKIATCSDDNTVRIW 385
>POMBASE|SPCC18.05c [details] [associations]
symbol:SPCC18.05c "notchless-like protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=ISS] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 PomBase:SPCC18.05c GO:GO:0043234
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0042254 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972 Pfam:PF08154
PIR:T41148 RefSeq:NP_588384.1 ProteinModelPortal:O74855
STRING:O74855 EnsemblFungi:SPCC18.05c.1 GeneID:2539380
KEGG:spo:SPCC18.05c OMA:KAVRIWR OrthoDB:EOG4PP1R9 NextBio:20800545
Uniprot:O74855
Length = 502
Score = 162 (62.1 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 49/161 (30%), Positives = 76/161 (47%)
Query: 282 STEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLV---GHTNSVEDLQWSPGEKRVLASC 338
S E V A+ D + + +W P+++ KP+ GH V +SP + R +A+
Sbjct: 357 SGERLVSASDDLQ--LILWDPQKS------TKPITKMHGHQKVVNHASFSP-DGRCIATA 407
Query: 339 SVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRF 398
S D S+R+WD + T + TL H + V +W+ L+VS D + VWD+R
Sbjct: 408 SFDSSVRLWDGK---TGKFLATL-RGHVAAVYQCAWSTDSRLLVSSSQDTTLKVWDVRSK 463
Query: 399 KKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALW 439
K + H V V+W P + ASGGAD + +W
Sbjct: 464 KMKFDLPG---HEDQVFAVDWSP-DGQRVASGGADKAVRIW 500
Score = 156 (60.0 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 38/132 (28%), Positives = 66/132 (50%)
Query: 317 GHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR 376
GH ++ Q+SP L + S D + R+WD +T++ + T+ HT+ V+ ++W
Sbjct: 132 GHDGTIISAQFSPSTSSRLVTGSGDFTARLWDC---DTQTPIATM-KGHTNWVSCVAWAP 187
Query: 377 TEPLIVSGGDDGCIHVWDLRRFKKGSSVA-TFKHHTAPVTTVEWHPT----ESSTF--AS 429
+I +G D I WD KKGS + + HT P+ + W P +S + AS
Sbjct: 188 DASIIATGSMDNTIRFWDP---KKGSPIGDALRRHTKPIMALCWQPLHLAPDSGPYLLAS 244
Query: 430 GGADDQIALWDL 441
G D+ + +W++
Sbjct: 245 GSKDNTVRIWNV 256
Score = 147 (56.8 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 43/147 (29%), Positives = 66/147 (44%)
Query: 305 AGAWQVD-QKPLV---GHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLT 360
A W D Q P+ GHTN V + W+P + ++A+ S+D +IR WD + + L
Sbjct: 159 ARLWDCDTQTPIATMKGHTNWVSCVAWAP-DASIIATGSMDNTIRFWDPKKGSPIGDAL- 216
Query: 361 LPNAHTSDVNVISWN--RTEP-----LIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAP 413
HT + + W P L+ SG D + +W++ K + + T HTAP
Sbjct: 217 --RRHTKPIMALCWQPLHLAPDSGPYLLASGSKDNTVRIWNV---KLRTLLFTLSGHTAP 271
Query: 414 VTTVEWHPTESSTFASGGADDQIALWD 440
+T V W + S D I +WD
Sbjct: 272 ITCVRWGG--QNWIYSSSYDKTIRIWD 296
Score = 116 (45.9 bits), Expect = 1.0e-09, Sum P(3) = 1.0e-09
Identities = 34/112 (30%), Positives = 52/112 (46%)
Query: 330 GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGC 389
GE+ L S S DL + +WD + +TK +T + H VN S++ I + D
Sbjct: 358 GER--LVSASDDLQLILWDPQK-STKP--ITKMHGHQKVVNHASFSPDGRCIATASFDSS 412
Query: 390 IHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDL 441
+ +WD K G +AT + H A V W T+S S D + +WD+
Sbjct: 413 VRLWD---GKTGKFLATLRGHVAAVYQCAWS-TDSRLLVSSSQDTTLKVWDV 460
Score = 105 (42.0 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 50/187 (26%), Positives = 83/187 (44%)
Query: 209 AGAWQVD-QKPLG---GHTNSAEDLQWSDLKTALQT--VDDPFQLAEHNKKRGKGPGIP- 261
A W D Q P+ GHTN + W+ + + T +D+ + + K G +
Sbjct: 159 ARLWDCDTQTPIATMKGHTNWVSCVAWAPDASIIATGSMDNTIRFWDPKKGSPIGDALRR 218
Query: 262 -TPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTN 320
T P+ + A D + P +LA+G + IW + + L GHT
Sbjct: 219 HTKPIMALCWQPLH-LAPD---SGPYLLASGSKDNTVRIWNVK----LRTLLFTLSGHTA 270
Query: 321 SVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPL 380
+ ++W G+ + +S S D +IRIWD + + K C+ L H + VN +S + TE +
Sbjct: 271 PITCVRWG-GQNWIYSS-SYDKTIRIWDAK--DGK-CLHIL-KGHAARVNHLSLS-TEHV 323
Query: 381 IVSGGDD 387
+ SG D
Sbjct: 324 LRSGAYD 330
Score = 88 (36.0 bits), Expect = 1.0e-09, Sum P(3) = 1.0e-09
Identities = 44/177 (24%), Positives = 68/177 (38%)
Query: 168 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAE 227
P+ + GH + W+ + ++ATG I W P++ G+ D L HT
Sbjct: 169 PIATMKGHTNWVSCVAWAP-DASIIATGSMDNTIRFWDPKK-GSPIGDA--LRRHTKPIM 224
Query: 228 DLQWSDLKTALQTVDDPFQLAEHNKK---RGKGPGIPTPPLFSFSGHLTEGFAMDWSSTE 284
L W L A + P+ LA +K R + T LF+ SGH + W
Sbjct: 225 ALCWQPLHLAPDS--GPYLLASGSKDNTVRIWNVKLRTL-LFTLSGHTAPITCVRWGGQN 281
Query: 285 PGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVD 341
+ + + I IW ++ + L GH V L S + VL S + D
Sbjct: 282 --WIYSSSYDKTIRIWDAKDGKCLHI----LKGHAARVNHLSLST--EHVLRSGAYD 330
Score = 65 (27.9 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 34/133 (25%), Positives = 53/133 (39%)
Query: 642 PGIPTPPLFSFSGHLTEGFAMDWSSTEPG--VLATGDCKRNIHIWTPREAGAWSVYLYTN 699
P T P+ GH ++ +S P +AT ++ +W G +L T
Sbjct: 375 PQKSTKPITKMHGHQK---VVNHASFSPDGRCIATASFDSSVRLWD----GKTGKFLATL 427
Query: 700 RFGVLATGDCK----RNIHIWTPREAG--AWQVDQKP----LVGHTNSVEDLQWSPGEKR 749
R V A C + + + ++ W V K L GH + V + WSP +R
Sbjct: 428 RGHVAAVYQCAWSTDSRLLVSSSQDTTLKVWDVRSKKMKFDLPGHEDQVFAVDWSPDGQR 487
Query: 750 VLASCSVDRSNRI 762
V AS D++ RI
Sbjct: 488 V-ASGGADKAVRI 499
Score = 62 (26.9 bits), Expect = 1.0e-09, Sum P(3) = 1.0e-09
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 650 FSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWT 685
F GH + FA+DWS V A+G + + IW+
Sbjct: 467 FDLPGHEDQVFAVDWSPDGQRV-ASGGADKAVRIWS 501
>FB|FBgn0046222 [details] [associations]
symbol:CG1109 species:7227 "Drosophila melanogaster"
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:Q04724
GeneTree:ENSGT00540000070914 KO:K15542 EMBL:AY051695
RefSeq:NP_730982.1 RefSeq:NP_730983.1 UniGene:Dm.4508 SMR:Q9VNG2
STRING:Q9VNG2 EnsemblMetazoa:FBtr0078713 EnsemblMetazoa:FBtr0078714
GeneID:40698 KEGG:dme:Dmel_CG1109 UCSC:CG1109-RA
FlyBase:FBgn0046222 InParanoid:Q9VNG2 OMA:TLRIWDF OrthoDB:EOG49ZW47
GenomeRNAi:40698 NextBio:820117 Uniprot:Q9VNG2
Length = 807
Score = 177 (67.4 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 40/138 (28%), Positives = 71/138 (51%)
Query: 311 DQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLS--IRIWDTRVINTKSCMLTLPNAHTSD 368
+++ L GH V+ + W P +K ++ S S D I+IWD + + + TL +AH S
Sbjct: 263 EERVLRGHGADVKCVHWHP-QKGMIVSGSKDNQQPIKIWDPK---SGIALATL-HAHKST 317
Query: 369 VNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFA 428
V + WN +V+ D + ++D+R ++ V F+ H ++V WHP F
Sbjct: 318 VMDLKWNDNGNWLVTASRDHLLKLFDIRNLRE--EVQVFRGHKKEASSVSWHPIHEGLFC 375
Query: 429 SGGADDQIALWDLAVERD 446
SGG+D I W++ +++
Sbjct: 376 SGGSDGSILFWNVGTDKE 393
Score = 162 (62.1 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 53/197 (26%), Positives = 89/197 (45%)
Query: 270 GHLTEGFAMDWSSTEPGVLATG--DCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQW 327
GH + + W + G++ +G D ++ I IW P+ A L H ++V DL+W
Sbjct: 269 GHGADVKCVHWHP-QKGMIVSGSKDNQQPIKIWDPKSGIALAT----LHAHKSTVMDLKW 323
Query: 328 SPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRT-EPLIVSGGD 386
+ L + S D ++++D R + + + + H + + +SW+ E L SGG
Sbjct: 324 NDNGNW-LVTASRDHLLKLFDIRNLREE---VQVFRGHKKEASSVSWHPIHEGLFCSGGS 379
Query: 387 DGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERD 446
DG I W++ K+ V T H + V T+ WHP SG D I W R
Sbjct: 380 DGSILFWNVGTDKEIGCVETA--HDSIVWTLAWHPL-GHILCSGSNDHTIKFWTR--NRP 434
Query: 447 SEIEQREAELKDLPSQL 463
++ + + L LP+ L
Sbjct: 435 GDLMRDKYNLNTLPASL 451
Score = 147 (56.8 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 45/167 (26%), Positives = 70/167 (41%)
Query: 276 FAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVL 335
F + W+ E L TG +W G + L H SV + WS + ++
Sbjct: 150 FTLAWTP-EGRRLVTGASSGEFTLWN----GLTFNFETILQAHDISVRTMVWSHNDSWMV 204
Query: 336 ASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDL 395
++ W + + N K + AH + IS++ T+ VSG DDG + +WD
Sbjct: 205 TGDHGGY-VKYWQSNMNNVK-----MYQAHKEAIRGISFSPTDSKFVSGSDDGTLRIWDF 258
Query: 396 RRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQ--IALWD 440
R ++ + H A V V WHP + SG D+Q I +WD
Sbjct: 259 MRCQEER---VLRGHGADVKCVHWHP-QKGMIVSGSKDNQQPIKIWD 301
Score = 60 (26.2 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 21/82 (25%), Positives = 32/82 (39%)
Query: 652 FSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIW---TPREAG----AWSVYLYT---NRF 701
F GH E ++ W G+ +G +I W T +E G A ++T +
Sbjct: 354 FRGHKKEASSVSWHPIHEGLFCSGGSDGSILFWNVGTDKEIGCVETAHDSIVWTLAWHPL 413
Query: 702 G-VLATGDCKRNIHIWTPREAG 722
G +L +G I WT G
Sbjct: 414 GHILCSGSNDHTIKFWTRNRPG 435
Score = 53 (23.7 bits), Expect = 7.5e-07, Sum P(2) = 7.5e-07
Identities = 18/55 (32%), Positives = 28/55 (50%)
Query: 702 GVLATG--DCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSP-GEKRVLAS 753
G++ +G D ++ I IW P+ A L H ++V DL+W+ G V AS
Sbjct: 284 GMIVSGSKDNQQPIKIWDPKSGIALAT----LHAHKSTVMDLKWNDNGNWLVTAS 334
>UNIPROTKB|F1MFJ6 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070
GO:GO:0005876 GO:GO:0000118 GeneTree:ENSGT00690000102024
EMBL:DAAA02002018 EMBL:DAAA02002019 EMBL:DAAA02002020
EMBL:DAAA02002021 EMBL:DAAA02002022 EMBL:DAAA02002023
EMBL:DAAA02002024 IPI:IPI00732449 UniGene:Bt.25104
ProteinModelPortal:F1MFJ6 Ensembl:ENSBTAT00000029211 OMA:GYARIWM
NextBio:20899067 Uniprot:F1MFJ6
Length = 514
Score = 174 (66.3 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 69/270 (25%), Positives = 115/270 (42%)
Query: 180 FAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQ 239
FA+ W+ +L+ G K I IW A Q+ P H+ A D+ W T
Sbjct: 270 FALKWNKKGNFILSAGVDKTTI-IWDAHTGEAKQLF--PF--HSAPALDVDWQSNNTFAS 324
Query: 240 TVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHI 299
D + H K G+ P+ +F GH E A+ W T +LA+ + I
Sbjct: 325 CSTD---MCIHVCKLGQDR-----PIKTFQGHTNEVNAIKWDPTG-NLLASCSDDMTLKI 375
Query: 300 WTPREAGAWQVDQKPLVGHTNSVEDLQWSP---GEKR-----VLASCSVDLSIRIWDTRV 351
W+ ++ D L H + ++WSP G +LAS S D ++R+WD
Sbjct: 376 WSMKQDNCVH-D---LQAHNKEIYTIKWSPTGPGTSNPNANLMLASASFDSTVRLWD--- 428
Query: 352 INTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHT 411
++ C+ TL H V ++++ + SG D C+H+W+ + G+ V +++ T
Sbjct: 429 VDRGICIHTLTK-HQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQT---GALVHSYRG-T 483
Query: 412 APVTTVEWHPTESSTFASGGADDQIALWDL 441
+ V W+ AS +D + + DL
Sbjct: 484 GGIFEVCWNAAGDKVGASA-SDGSVCVLDL 512
Score = 164 (62.8 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 73/289 (25%), Positives = 109/289 (37%)
Query: 164 IPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHT 223
IP GH +E F W+ +LA+G IW E Q L H
Sbjct: 157 IPPNKAVVLRGHESEVFICAWNPVSD-LLASGSGDSTARIWNLSENSTSGSTQLVLR-HC 214
Query: 224 --NSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSG-HLTEGFAMDW 280
+D+ + T+L + LA + L S G H FA+ W
Sbjct: 215 IREGGQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIWTKDGNLASTLGQHKGPIFALKW 274
Query: 281 SSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSV 340
+ +L+ G K I IW A Q+ P H+ D+ W ASCS
Sbjct: 275 NKKGNFILSAGVDKTTI-IWDAHTGEAKQLF--PF--HSAPALDVDWQ--SNNTFASCST 327
Query: 341 DLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKK 400
D+ I + + + T HT++VN I W+ T L+ S DD + +W + K+
Sbjct: 328 DMCIHVCK---LGQDRPIKTF-QGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSM---KQ 380
Query: 401 GSSVATFKHHTAPVTTVEWHPTESST--------FASGGADDQIALWDL 441
+ V + H + T++W PT T AS D + LWD+
Sbjct: 381 DNCVHDLQAHNKEIYTIKWSPTGPGTSNPNANLMLASASFDSTVRLWDV 429
Score = 124 (48.7 bits), Expect = 0.00033, P = 0.00033
Identities = 57/234 (24%), Positives = 87/234 (37%)
Query: 172 FSGHLTEGFAMDWSSTEPGVLATGD-CKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQ 230
F H +DW S + D C IH+ + G + K GHTN ++
Sbjct: 304 FPFHSAPALDVDWQSNNTFASCSTDMC---IHVC---KLGQDR-PIKTFQGHTNEVNAIK 356
Query: 231 WSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLAT 290
W L + D L + K+ + H E + + WS T PG T
Sbjct: 357 WDPTGNLLASCSDDMTLKIWSMKQDNC-------VHDLQAHNKEIYTIKWSPTGPG---T 406
Query: 291 GDCKRNIHIWTPR---EAGAWQVDQ----KPLVGHTNSVEDLQWSPGEKRVLASCSVDLS 343
+ N+ + + W VD+ L H V + +SP + R LAS S D
Sbjct: 407 SNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSP-DGRYLASGSFDKC 465
Query: 344 IRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRR 397
+ IW NT++ L T + + WN + + DG + V DLR+
Sbjct: 466 VHIW-----NTQTGALVHSYRGTGGIFEVCWNAAGDKVGASASDGSVCVLDLRK 514
>ASPGD|ASPL0000058626 [details] [associations]
symbol:AN1208 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001308 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 EMBL:AACD01000017
GO:GO:0007049 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_658812.1
ProteinModelPortal:Q5BE22 STRING:Q5BE22
EnsemblFungi:CADANIAT00001416 GeneID:2876986 KEGG:ani:AN1208.2
OMA:KSEEHAR OrthoDB:EOG4QZBVP Uniprot:Q5BE22
Length = 452
Score = 171 (65.3 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 69/248 (27%), Positives = 104/248 (41%)
Query: 269 SGHLTEGFAMDWSSTEPGV--LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQ 326
SGHL G+ + EP A+G R I IW GA ++ L GH ++V L
Sbjct: 140 SGHL--GWVRSLA-VEPNNEWFASGAGDRTIKIWN-LATGALRLT---LTGHISTVRGLA 192
Query: 327 WSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGD 386
SP L SC D ++ WD + T ++ + H S V ++ + L+V+GG
Sbjct: 193 VSPRHP-YLFSCGEDKMVKCWD---LETNK-VIRHYHGHLSGVYTLALHPRLDLLVTGGR 247
Query: 387 DGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERD 446
DG VWD+R S++ HT V V+ + +G D + LWDLA +
Sbjct: 248 DGVARVWDMRT---RSNIHVLSGHTGTVADVQCQEADPQVI-TGSLDATVRLWDLAAGKT 303
Query: 447 SEI-EQREAELKDL---PSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFN-IFRTIS 501
+ + ++ L P + F IK+ W + PG G N I T+S
Sbjct: 304 MGVLTHHKKGIRSLATHPREFTFASASTGSIKQ--W--KCPGGEFMQNFEGHNAIINTLS 359
Query: 502 DLPSQLLF 509
+LF
Sbjct: 360 VNEDNVLF 367
Score = 47 (21.6 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 15/50 (30%), Positives = 22/50 (44%)
Query: 583 FIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTAL--QTVDDPFQ 630
F H IN + + + +G G+ G + WD KT QT+D Q
Sbjct: 348 FEGHNAIINTLSVNE-DNVLFSG--GDNGSMSFWDWKTGYRYQTIDTTAQ 394
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 171 (65.3 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 73/278 (26%), Positives = 124/278 (44%)
Query: 267 SFSGHLTEGFAMDWS-STEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDL 325
+ GH G M+ +T+ +L + + + +W E G +V K L GHT+ V
Sbjct: 131 TLKGH--SGAVMELHYNTDGSMLFSASTDKTVAVWDS-ETGE-RV--KRLKGHTSFVNSC 184
Query: 326 QWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGG 385
+ +++ + S D ++++WD R K+ + T N T V +++N T I+SGG
Sbjct: 185 YPARRGPQLVCTGSDDGTVKLWDIR---KKAAVQTFQN--TYQVLAVTFNDTSDQIISGG 239
Query: 386 DDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVER 445
D I VWDLR+ K T + H VT + +E S S D+ + +WD+
Sbjct: 240 IDNDIKVWDLRQNKL---TYTMRGHADSVTGLSLS-SEGSYLLSNAMDNTVRIWDVR--- 292
Query: 446 DSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPS 505
+E +K +H +K + W P G+ I A + F + D S
Sbjct: 293 --PFAPKERCVKIFQGN---VHNFEKNLLRCSWSPD--GSKI--AGGSADRFVYVWDTTS 343
Query: 506 QLLFIHL-GQK-EIKELHWHPQLPGTIISTANSGFNIF 541
+ + L G + EL +HP+ P II +A+S ++
Sbjct: 344 RRILYKLPGHAGSVNELAFHPEEP--IILSASSDKRLY 379
>DICTYBASE|DDB_G0288375 [details] [associations]
symbol:lis1 "lissencephaly-1 homolog protein"
species:44689 "Dictyostelium discoideum" [GO:0071539 "protein
localization to centrosome" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=IGI] [GO:0051645 "Golgi
localization" evidence=IMP] [GO:0051642 "centrosome localization"
evidence=IMP] [GO:0045504 "dynein heavy chain binding"
evidence=IPI] [GO:0031592 "centrosomal corona" evidence=IDA]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051301 "cell division" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 dictyBase:DDB_G0288375
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0019933 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CM000154_GR GO:GO:0051642
GO:GO:0051645 EMBL:AAFI02000111 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 HSSP:P63005 GO:GO:0031592 GO:GO:0071539 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AJ512336
EMBL:AJ512794 RefSeq:XP_636715.1 ProteinModelPortal:Q8I0F4
SMR:Q8I0F4 STRING:Q8I0F4 EnsemblProtists:DDB0219930 GeneID:8626591
KEGG:ddi:DDB_G0288375 ProtClustDB:CLSZ2429884 Uniprot:Q8I0F4
Length = 419
Score = 165 (63.1 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 63/237 (26%), Positives = 106/237 (44%)
Query: 254 RGKGPGIPTPPLFSFSGHLTEGFAMDWSSTE--PG--VLATGDCKRNIHIWTPREAGAWQ 309
RGK +P PP H+ G +S + P ++ + I +W E+G ++
Sbjct: 87 RGKEDALPRPP----EKHILTGHRNCINSVKFHPSFSLMVSASEDATIKVWD-FESGEFE 141
Query: 310 VDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDV 369
+ L GHTN+V+D+ + +LASCS DL+I++WD T C+ TL + H +V
Sbjct: 142 ---RTLKGHTNAVQDIDFDK-TGNLLASCSADLTIKLWD---FQTYDCVKTL-HGHDHNV 193
Query: 370 NVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFAS 429
+ + + + ++S D I VW+ G + T H V + + S AS
Sbjct: 194 SCVRFTPSGDQLISSSRDKTIKVWEAAT---GYCIKTLVGHEDWVRKITVSE-DGSCIAS 249
Query: 430 GGADDQIALWD------LAVERD-SEIEQ----REAELKDLPSQLLFIHLGQKEIKE 475
D I W+ LA R+ S + + A + D+P LL G+ ++K+
Sbjct: 250 CSNDQTIKTWNIVKGECLATYREHSHVVECLAFSTANIIDIPGSLLSTPEGKSKVKQ 306
Score = 126 (49.4 bits), Expect = 0.00014, P = 0.00014
Identities = 37/111 (33%), Positives = 54/111 (48%)
Query: 286 GVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIR 345
G LATG + I IW E + +GH N V +++ P K +L S D +IR
Sbjct: 317 GYLATGSRDKTIKIW---ELATGRC-LATYIGHDNWVRAVRFHPCGKFLL-SVGDDKTIR 371
Query: 346 IWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLR 396
+WD I C+ T+ AHT ++ + + P I +GG D I VW L+
Sbjct: 372 VWD---IAQGRCIKTINEAHTHFISCLDFCLHNPHIATGGVDDVIKVWKLQ 419
Score = 52 (23.4 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 702 GVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNR 761
G LATG + I IW E + +GH N V +++ P K +L S D++ R
Sbjct: 317 GYLATGSRDKTIKIW---ELATGRC-LATYIGHDNWVRAVRFHPCGKFLL-SVGDDKTIR 371
Query: 762 I 762
+
Sbjct: 372 V 372
Score = 43 (20.2 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 19/58 (32%), Positives = 26/58 (44%)
Query: 670 GVLATGDCKRNIHIWTPREAGAWSVYL-YTN-----RF---G--VLATGDCKRNIHIW 716
G LATG + I IW + Y+ + N RF G +L+ GD K I +W
Sbjct: 317 GYLATGSRDKTIKIWELATGRCLATYIGHDNWVRAVRFHPCGKFLLSVGDDK-TIRVW 373
>UNIPROTKB|E1BQV9 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00594543
ProteinModelPortal:E1BQV9 Ensembl:ENSGALT00000001552
ArrayExpress:E1BQV9 Uniprot:E1BQV9
Length = 660
Score = 175 (66.7 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 51/173 (29%), Positives = 82/173 (47%)
Query: 269 SGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWS 328
+GH T ++ S+ E ++A G +I +W + A ++ + L+GH ++ L +
Sbjct: 59 TGHTTPIESLQISAKEELIVA-GSQSGSIRVW---DLEAAKI-LRTLLGHKANICSLDFH 113
Query: 329 PGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDG 388
P V AS S+D I++WD R K C+ +HT V + ++ + S DD
Sbjct: 114 PYGSFV-ASGSLDTDIKLWDVR---RKGCIFKY-KSHTQAVRCLRFSPDGKWLASAADDH 168
Query: 389 CIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDL 441
+ +WDL G + F H PV VE+HP+ ASG + I WDL
Sbjct: 169 TVKLWDLTA---GKVMFEFTGHYGPVNVVEFHPSIEYLLASGSSSMTIRFWDL 218
Score = 163 (62.4 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 42/135 (31%), Positives = 67/135 (49%)
Query: 307 AWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHT 366
AW++ + +V H+++V L R+LA+ D + +W V + +LT HT
Sbjct: 10 AWKLQE--IVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWS--VAQLRHDLLT---GHT 62
Query: 367 SDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESST 426
+ + + + E LIV+G G I VWDL K + T H A + ++++HP S
Sbjct: 63 TPIESLQISAKEELIVAGSQSGSIRVWDLEAAK---ILRTLLGHKANICSLDFHPY-GSF 118
Query: 427 FASGGADDQIALWDL 441
ASG D I LWD+
Sbjct: 119 VASGSLDTDIKLWDV 133
Score = 131 (51.2 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 48/191 (25%), Positives = 84/191 (43%)
Query: 288 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIW 347
+A+G +I +W R G K HT +V L++SP K LAS + D ++++W
Sbjct: 119 VASGSLDTDIKLWDVRRKGCI-FKYK---SHTQAVRCLRFSPDGKW-LASAADDHTVKLW 173
Query: 348 DTRVINTKSCMLTLPNAHTSDVNVISWNRT-EPLIVSGGDDGCIHVWDLRRFKKGSSVAT 406
D + M H VNV+ ++ + E L+ SG I WDL +F V+
Sbjct: 174 D---LTAGKVMFEF-TGHYGPVNVVEFHPSIEYLLASGSSSMTIRFWDLEKFHV---VSC 226
Query: 407 FKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQ----REAELKDLPSQ 462
+ PV + ++P + GG D + ++ ER ++ + A+L +Q
Sbjct: 227 IEEEATPVRCILFNPDGCCLY--GGFQDSLRVYGWEPERCFDVVVVNWGKVADLSVCHNQ 284
Query: 463 LLFIHLGQKEI 473
L+ + Q +
Sbjct: 285 LIGVSFAQSTV 295
Score = 50 (22.7 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 18/59 (30%), Positives = 29/59 (49%)
Query: 704 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRI 762
+A+G +I +W R G K HT +V L++SP K LAS + D + ++
Sbjct: 119 VASGSLDTDIKLWDVRRKGCI-FKYK---SHTQAVRCLRFSPDGKW-LASAADDHTVKL 172
Score = 44 (20.5 bits), Expect = 7.1e-08, Sum P(2) = 7.1e-08
Identities = 9/36 (25%), Positives = 17/36 (47%)
Query: 649 LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIW 684
+F F+GH +++ + +LA+G I W
Sbjct: 181 MFEFTGHYGPVNVVEFHPSIEYLLASGSSSMTIRFW 216
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 173 (66.0 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 63/259 (24%), Positives = 111/259 (42%)
Query: 296 NIHIWT--PREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVIN 353
N+ W+ P+ W +Q+ L H VE + +SP K+ L S S D +++IWD
Sbjct: 725 NLSGWSQLPKVEQTWSAEQQTLENHLGPVESVVFSPDGKQ-LVSGSYDDTVKIWDPA--- 780
Query: 354 TKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAP 413
T + TL + H+ V ++++ L+ SG D I +WD G + TF+ H
Sbjct: 781 TGELLQTL-DGHSGTVESLAFSPDGKLLASGSYDNTIDLWDSAT---GELLQTFEGHPHS 836
Query: 414 VTTVEWHPTESSTFASGGADDQIALWDLAV-ERDSEIEQREAELKDL---PS-QLLFIHL 468
+ +V + P + AS D I +WDLA E ++ ++ + P +LL
Sbjct: 837 IWSVAFAP-DGKELASASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDGKLLASSS 895
Query: 469 GQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPG 528
IK W+P G + + ++++ P +K +L W+P G
Sbjct: 896 LDSTIKV--WNPAT-GELQQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKL-WNPAT-G 950
Query: 529 TIISTANSGFNIFRTISMS 547
++ T R+++ S
Sbjct: 951 ELLQTLEGHSQSVRSVAFS 969
Score = 162 (62.1 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 47/155 (30%), Positives = 72/155 (46%)
Query: 288 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIW 347
LA+G K + +W P Q L GH+ SV + +SP K+ LAS S D +I++W
Sbjct: 933 LASGSEKNTVKLWNPATGELLQT----LEGHSQSVRSVAFSPDGKQ-LASSSSDTTIKLW 987
Query: 348 DTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATF 407
++ T T H + ++++ +VSG DD I +WDL + S+
Sbjct: 988 NS---TTGELQQTF-KGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSL--- 1040
Query: 408 KHHTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442
+ H+ V V + P + AS D I LWD A
Sbjct: 1041 EDHSRSVHAVAFSPDDKQ-LASSSLDSTIKLWDSA 1074
Score = 141 (54.7 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 62/252 (24%), Positives = 104/252 (41%)
Query: 288 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIW 347
L +G I +W + ++ Q L H+ SV + +SP +K+ LAS S+D +I++W
Sbjct: 1017 LVSGSDDNTIKLW---DLATSELQQS-LEDHSRSVHAVAFSPDDKQ-LASSSLDSTIKLW 1071
Query: 348 DTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATF 407
D+ T TL H+ V ++++ L+ S DG I +W+ G T
Sbjct: 1072 DSA---TGELQRTL-EGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLT---GELQQTL 1124
Query: 408 KHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAV-ERDSEIEQREAELKDL---PSQL 463
+ V +V + P + ASG D I LWD A E +E ++ + P
Sbjct: 1125 TGRSDWVDSVAFSP-DGKQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSPDGK 1183
Query: 464 LFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWH 523
L + +L W P G ++ +++ P L E +L W
Sbjct: 1184 LLASGSYDQTAKL-WDPAT-GELLQIFEGHSKWVESVAFSPDGKLLASSSYGETIKL-WD 1240
Query: 524 PQLPGTIISTAN 535
P + G ++ T N
Sbjct: 1241 P-VTGELLQTLN 1251
Score = 58 (25.5 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 17/53 (32%), Positives = 27/53 (50%)
Query: 703 VLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCS 755
+LA+G + +W P Q+ + GH+ VE + +SP K +LAS S
Sbjct: 1184 LLASGSYDQTAKLWDPATGELLQIFE----GHSKWVESVAFSPDGK-LLASSS 1231
Score = 56 (24.8 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 17/59 (28%), Positives = 31/59 (52%)
Query: 704 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRI 762
L +G I +W + ++ Q L H+ SV + +SP +K+ LAS S+D + ++
Sbjct: 1017 LVSGSDDNTIKLW---DLATSELQQS-LEDHSRSVHAVAFSPDDKQ-LASSSLDSTIKL 1070
Score = 55 (24.4 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 17/54 (31%), Positives = 28/54 (51%)
Query: 704 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVD 757
LA+ I +W ++ ++ Q+ L GH+ V + +SP K +LAS S D
Sbjct: 1059 LASSSLDSTIKLW---DSATGEL-QRTLEGHSQGVRSVTFSPDGK-LLASNSYD 1107
Score = 55 (24.4 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 17/59 (28%), Positives = 34/59 (57%)
Query: 704 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRI 762
LA+G I +W ++ ++ Q L GH++ ++ + +SP K +LAS S D++ ++
Sbjct: 1143 LASGYYDSTIKLW---DSATGELLQT-LEGHSDRIQSVVFSPDGK-LLASGSYDQTAKL 1196
Score = 50 (22.7 bits), Expect = 9.6e-09, Sum P(2) = 9.6e-09
Identities = 23/90 (25%), Positives = 41/90 (45%)
Query: 673 ATGDCKRNIHIWTPREAGAWSVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLV 732
ATG+ +R + G SV ++ +LA+ I +W P Q+ L
Sbjct: 1074 ATGELQRTLE---GHSQGVRSV-TFSPDGKLLASNSYDGTIKLWNPLTGEL----QQTLT 1125
Query: 733 GHTNSVEDLQWSPGEKRVLASCSVDRSNRI 762
G ++ V+ + +SP K+ LAS D + ++
Sbjct: 1126 GRSDWVDSVAFSPDGKQ-LASGYYDSTIKL 1154
>CGD|CAL0005349 [details] [associations]
symbol:HAT2 species:5476 "Candida albicans" [GO:0000123
"histone acetyltransferase complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA;IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA;IDA] [GO:0016573 "histone acetylation"
evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:2000221
"negative regulation of pseudohyphal growth" evidence=IMP]
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
[GO:0034614 "cellular response to reactive oxygen species"
evidence=IMP] [GO:0006333 "chromatin assembly or disassembly"
evidence=IEA] [GO:0006348 "chromatin silencing at telomere"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005349 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006281 eggNOG:COG2319 GO:GO:0016568
KO:K10752 InterPro:IPR022052 Pfam:PF12265 EMBL:AACQ01000162
EMBL:AACQ01000158 RefSeq:XP_712278.1 RefSeq:XP_712421.1
ProteinModelPortal:Q59RH5 STRING:Q59RH5 GeneID:3645973
GeneID:3646093 KEGG:cal:CaO19.2146 KEGG:cal:CaO19.9693
Uniprot:Q59RH5
Length = 382
Score = 170 (64.9 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 55/219 (25%), Positives = 105/219 (47%)
Query: 268 FSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIW-TPREAGAWQVD-QKPLVGHTNSVEDL 325
F+ H G+ + W+ + G+L TG + + T ++ D QK +V D+
Sbjct: 139 FAPHTKNGYGLSWNPKQKGLLVTGADDNFVCVTDTTTNKTTFKSDIQKDIVN------DV 192
Query: 326 QWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSD-VNVISWNR-TEPLIVS 383
+W + AS S D + ++D R + K +++ A +S+ +N ++++ E L+
Sbjct: 193 KWHQFNGNLFASVSEDSHVYLFDAR--DNK--VVSQYYAESSNGINSLAFSPFAENLVAI 248
Query: 384 GGDDGCIHVWDLRRFKKGSSVA-TFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442
G I++ DLR+ + S + T H+ +T +E+ P A+G D +I +WDL
Sbjct: 249 GNTSSNINLLDLRKLGENSGLLHTMMGHSEGITCMEFSPHHDGILATGSQDRRIIIWDLF 308
Query: 443 VERDSEIEQREAELKDLPSQLLFIHLGQKE-IKELHWHP 480
+ E EQ++ + +D +L +H G + +L W P
Sbjct: 309 --KVGE-EQQQEDAEDGCPELFMMHAGHTAGVSDLSWCP 344
>UNIPROTKB|Q59RH5 [details] [associations]
symbol:HAT2 "Histone acetyltransferase type B subunit 2"
species:237561 "Candida albicans SC5314" [GO:0005634 "nucleus"
evidence=IDA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0034614 "cellular response to reactive oxygen species"
evidence=IMP] [GO:2000221 "negative regulation of pseudohyphal
growth" evidence=IMP] [GO:0004402 "histone acetyltransferase
activity" evidence=IDA] [GO:0042393 "histone binding" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0005349 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006281
eggNOG:COG2319 GO:GO:0016568 KO:K10752 InterPro:IPR022052
Pfam:PF12265 EMBL:AACQ01000162 EMBL:AACQ01000158 RefSeq:XP_712278.1
RefSeq:XP_712421.1 ProteinModelPortal:Q59RH5 STRING:Q59RH5
GeneID:3645973 GeneID:3646093 KEGG:cal:CaO19.2146
KEGG:cal:CaO19.9693 Uniprot:Q59RH5
Length = 382
Score = 170 (64.9 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 55/219 (25%), Positives = 105/219 (47%)
Query: 268 FSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIW-TPREAGAWQVD-QKPLVGHTNSVEDL 325
F+ H G+ + W+ + G+L TG + + T ++ D QK +V D+
Sbjct: 139 FAPHTKNGYGLSWNPKQKGLLVTGADDNFVCVTDTTTNKTTFKSDIQKDIVN------DV 192
Query: 326 QWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSD-VNVISWNR-TEPLIVS 383
+W + AS S D + ++D R + K +++ A +S+ +N ++++ E L+
Sbjct: 193 KWHQFNGNLFASVSEDSHVYLFDAR--DNK--VVSQYYAESSNGINSLAFSPFAENLVAI 248
Query: 384 GGDDGCIHVWDLRRFKKGSSVA-TFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442
G I++ DLR+ + S + T H+ +T +E+ P A+G D +I +WDL
Sbjct: 249 GNTSSNINLLDLRKLGENSGLLHTMMGHSEGITCMEFSPHHDGILATGSQDRRIIIWDLF 308
Query: 443 VERDSEIEQREAELKDLPSQLLFIHLGQKE-IKELHWHP 480
+ E EQ++ + +D +L +H G + +L W P
Sbjct: 309 --KVGE-EQQQEDAEDGCPELFMMHAGHTAGVSDLSWCP 344
>UNIPROTKB|B5X9P2 [details] [associations]
symbol:ciao1a "Probable cytosolic iron-sulfur protein
assembly protein ciao1-A" species:8030 "Salmo salar" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] [GO:0097361 "CIA
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016226 GO:GO:0097361 EMBL:BT047761
ProteinModelPortal:B5X9P2 Uniprot:B5X9P2
Length = 330
Score = 165 (63.1 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 57/231 (24%), Positives = 108/231 (46%)
Query: 315 LVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISW 374
L GH N V+ + W+P + LA+CS D S+ IW+ + C+ ++ N+HT DV + W
Sbjct: 101 LEGHENEVKCVAWAPSGNQ-LATCSRDKSVWIWEVDEEDEYECV-SVVNSHTQDVKHVVW 158
Query: 375 NRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADD 434
+ T+ L+ S D + V+ AT + HT+ V + + P+ AS D
Sbjct: 159 HPTQELLASCSYDNNVCVYK-EEDDDWECRATLEGHTSTVWGLTFDPS-GQRLASCSDDR 216
Query: 435 QIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTA-NSG 493
+ +W + + K + + L H G + + ++ W P L G + + + G
Sbjct: 217 TVKIWKECQPGGGQ----DTAWKCVCT-LSGFH-G-RTVYDIAWCP-LTGALATACGDDG 268
Query: 494 FNIFRTISDL-PSQLLF---IHLGQKEIKELH---WHPQLPGTIISTANSG 537
+F+ P Q +F H+ + ++++ WHP+ G ++S +++G
Sbjct: 269 VRVFKEDETADPDQPVFSLSAHVPKAHSQDVNCIAWHPKEAGLLVSCSDNG 319
Score = 161 (61.7 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 67/309 (21%), Positives = 126/309 (40%)
Query: 191 VLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEH 250
+LA+ R I IW RE +W+ GH + + WS L +
Sbjct: 30 LLASCGGDRAIRIWG-REGDSWECKTVLQDGHQRAVRKVAWSPCGNYLASASFDATTCIW 88
Query: 251 NKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQV 310
KK + GH E + W+ + LAT +++ IW E ++
Sbjct: 89 KKKNDDFECLTV-----LEGHENEVKCVAWAPSG-NQLATCSRDKSVWIWEVDEEDEYEC 142
Query: 311 DQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVN 370
+ HT V+ + W P ++ +LASCS D ++ ++ + + C TL HTS V
Sbjct: 143 -VSVVNSHTQDVKHVVWHPTQE-LLASCSYDNNVCVYKEEDDDWE-CRATL-EGHTSTVW 198
Query: 371 VISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVA-----TFK-HHTAPVTTVEWHPTES 424
++++ + + S DD + +W + G A T H V + W P +
Sbjct: 199 GLTFDPSGQRLASCSDDRTVKIWKECQPGGGQDTAWKCVCTLSGFHGRTVYDIAWCPL-T 257
Query: 425 STFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPG 484
A+ DD + ++ ++ E + + L + + H +++ + WHP+ G
Sbjct: 258 GALATACGDDGVRVF-----KEDETADPDQPVFSLSAHVPKAH--SQDVNCIAWHPKEAG 310
Query: 485 TIISTANSG 493
++S +++G
Sbjct: 311 LLVSCSDNG 319
Score = 147 (56.8 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 53/179 (29%), Positives = 82/179 (45%)
Query: 280 WSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCS 339
W T+ +LA+ N+ ++ E W+ + L GHT++V L + P +R LASCS
Sbjct: 158 WHPTQE-LLASCSYDNNVCVYK-EEDDDWEC-RATLEGHTSTVWGLTFDPSGQR-LASCS 213
Query: 340 VDLSIRIWDTRVI----NTK-SCMLTLPNAHTSDVNVISW-NRTEPLIVSGGDDGCIHVW 393
D +++IW +T C+ TL H V I+W T L + GDDG + V+
Sbjct: 214 DDRTVKIWKECQPGGGQDTAWKCVCTLSGFHGRTVYDIAWCPLTGALATACGDDG-VRVF 272
Query: 394 --------DLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444
D F + V K H+ V + WHP E+ S + +IA+W+ E
Sbjct: 273 KEDETADPDQPVFSLSAHVP--KAHSQDVNCIAWHPKEAGLLVSCSDNGEIAVWNYQSE 329
Score = 50 (22.7 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 734 HTNSVEDLQWSPGEKRVLASCS 755
H+ V + W P E +L SCS
Sbjct: 295 HSQDVNCIAWHPKEAGLLVSCS 316
>MGI|MGI:1336172 [details] [associations]
symbol:Tbl1x "transducin (beta)-like 1 X-linked"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0003714 "transcription corepressor
activity" evidence=ISO;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0005667
"transcription factor complex" evidence=IDA] [GO:0005876 "spindle
microtubule" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0006508 "proteolysis" evidence=ISO] [GO:0007605 "sensory
perception of sound" evidence=ISO] [GO:0008013 "beta-catenin
binding" evidence=ISO] [GO:0008022 "protein C-terminus binding"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0017053 "transcriptional repressor complex"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0042393 "histone binding" evidence=ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0043627 "response to estrogen stimulus"
evidence=IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO;IDA] [GO:0045444 "fat cell differentiation"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IMP] [GO:0048545 "response to steroid hormone
stimulus" evidence=IMP] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 MGI:MGI:1336172 GO:GO:0003714
GO:GO:0045892 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0003682 GO:GO:0005667 GO:GO:0044212 GO:GO:0043627
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045444
GeneTree:ENSGT00690000102024 KO:K04508 HOGENOM:HOG000220902
OrthoDB:EOG412M5M CTD:6907 EMBL:AK030547 EMBL:AK031937
EMBL:AK038674 EMBL:BC043105 EMBL:F38006 IPI:IPI00223056
RefSeq:NP_065626.1 UniGene:Mm.258476 ProteinModelPortal:Q9QXE7
SMR:Q9QXE7 STRING:Q9QXE7 PhosphoSite:Q9QXE7 PaxDb:Q9QXE7
PRIDE:Q9QXE7 Ensembl:ENSMUST00000088217 GeneID:21372 KEGG:mmu:21372
InParanoid:Q9QXE7 NextBio:300588 Bgee:Q9QXE7 CleanEx:MM_TBL1X
Genevestigator:Q9QXE7 GermOnline:ENSMUSG00000025246 Uniprot:Q9QXE7
Length = 527
Score = 172 (65.6 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 80/297 (26%), Positives = 118/297 (39%)
Query: 164 IPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPRE---AGAWQVDQKPL- 219
IP GH +E F W+ +LA+G IW E G+ Q+ +
Sbjct: 170 IPPSKATVLRGHESEVFICAWNPVSD-LLASGSGDSTARIWNLNENSNGGSTQLVLRHCI 228
Query: 220 --GGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSG-HLTEGF 276
GGH D+ + T+L D LA + L S G H F
Sbjct: 229 REGGH-----DVPSNKDVTSLDWNSDGTLLATGSYDGFARIWTEDGNLASTLGQHKGPIF 283
Query: 277 AMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLA 336
A+ W+ +L+ G K I IW A Q Q P H+ D+ W A
Sbjct: 284 ALKWNKKGNYILSAGVDKTTI-IWDAHTGEAKQ--QFPF--HSAPALDVDWQ--NNTTFA 336
Query: 337 SCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLR 396
SCS D+ I + R + + T HT++VN I W+ + L+ S DD + +W +
Sbjct: 337 SCSTDMCIHV--CR-LGCDRPVKTF-QGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSM- 391
Query: 397 RFKKGSSVATFKHHTAPVTTVEWHPTESST--------FASGGADDQIALWDLAVER 445
K+ + V + H+ + T++W PT +T AS D + LWD VER
Sbjct: 392 --KQDACVHDLQAHSKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWD--VER 444
Score = 169 (64.5 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 69/272 (25%), Positives = 115/272 (42%)
Query: 180 FAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQ 239
FA+ W+ +L+ G K I IW A Q Q P H+ A D+ W + T
Sbjct: 283 FALKWNKKGNYILSAGVDKTTI-IWDAHTGEAKQ--QFPF--HSAPALDVDWQNNTTFAS 337
Query: 240 TVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRN--I 297
D + H + G P+ +F GH E A+ W +P + C + +
Sbjct: 338 CSTD---MCIHVCRLGCDR-----PVKTFQGHTNEVNAIKW---DPSGMLLASCSDDMTL 386
Query: 298 HIWTPREAGAWQVDQKPLVGHTNSVEDLQWSP--------GEKRVLASCSVDLSIRIWDT 349
IW+ ++ A D L H+ + ++WSP +LAS S D ++R+WD
Sbjct: 387 KIWSMKQ-DACVHD---LQAHSKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWD- 441
Query: 350 RVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKH 409
+ C+ TL H V ++++ + SG D C+H+W+ + GS V +++
Sbjct: 442 --VERGVCIHTLTK-HQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQ---SGSLVHSYRG 495
Query: 410 HTAPVTTVEWHPTESSTFASGGADDQIALWDL 441
T + V W+ AS +D + + DL
Sbjct: 496 -TGGIFEVCWNARGDKVGASA-SDGSVCVLDL 525
>RGD|1563868 [details] [associations]
symbol:Tbl1x "transducin (beta)-like 1 X-linked" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003682 "chromatin binding"
evidence=IEA;ISO] [GO:0003714 "transcription corepressor activity"
evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005667 "transcription
factor complex" evidence=IEA;ISO] [GO:0005876 "spindle microtubule"
evidence=ISO] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0006508 "proteolysis"
evidence=ISO] [GO:0007605 "sensory perception of sound"
evidence=ISO] [GO:0008013 "beta-catenin binding" evidence=ISO]
[GO:0008022 "protein C-terminus binding" evidence=ISO] [GO:0008134
"transcription factor binding" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0019904 "protein domain
specific binding" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA;ISO] [GO:0043627 "response to
estrogen stimulus" evidence=IEA;ISO] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA;ISO] [GO:0045444 "fat
cell differentiation" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0048545
"response to steroid hormone stimulus" evidence=ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISO]
[GO:0000118 "histone deacetylase complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:1563868
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 GeneTree:ENSGT00690000102024
KO:K04508 EMBL:CH473966 CTD:6907 RefSeq:NP_001100434.1
UniGene:Rn.107002 SMR:G3V6G5 Ensembl:ENSRNOT00000004901
GeneID:302711 KEGG:rno:302711 NextBio:650027 Uniprot:G3V6G5
Length = 527
Score = 172 (65.6 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 80/297 (26%), Positives = 118/297 (39%)
Query: 164 IPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPRE---AGAWQVDQKPL- 219
IP GH +E F W+ +LA+G IW E G+ Q+ +
Sbjct: 170 IPPSKATVLRGHESEVFICAWNPVSD-LLASGSGDSTARIWNLNENSNGGSTQLVLRHCI 228
Query: 220 --GGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSG-HLTEGF 276
GGH D+ + T+L D LA + L S G H F
Sbjct: 229 REGGH-----DVPSNKDVTSLDWNSDGTLLATGSYDGFARIWTEDGNLASTLGQHKGPIF 283
Query: 277 AMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLA 336
A+ W+ +L+ G K I IW A Q Q P H+ D+ W A
Sbjct: 284 ALKWNKKGNYILSAGVDKTTI-IWDAHTGEAKQ--QFPF--HSAPALDVDWQ--NNTTFA 336
Query: 337 SCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLR 396
SCS D+ I + R + + T HT++VN I W+ + L+ S DD + +W +
Sbjct: 337 SCSTDMCIHV--CR-LGCDRPVKTF-QGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSM- 391
Query: 397 RFKKGSSVATFKHHTAPVTTVEWHPTESST--------FASGGADDQIALWDLAVER 445
K+ + V + H+ + T++W PT +T AS D + LWD VER
Sbjct: 392 --KQDACVHDLQAHSKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWD--VER 444
Score = 169 (64.5 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 69/272 (25%), Positives = 115/272 (42%)
Query: 180 FAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQ 239
FA+ W+ +L+ G K I IW A Q Q P H+ A D+ W + T
Sbjct: 283 FALKWNKKGNYILSAGVDKTTI-IWDAHTGEAKQ--QFPF--HSAPALDVDWQNNTTFAS 337
Query: 240 TVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRN--I 297
D + H + G P+ +F GH E A+ W +P + C + +
Sbjct: 338 CSTD---MCIHVCRLGCDR-----PVKTFQGHTNEVNAIKW---DPSGMLLASCSDDMTL 386
Query: 298 HIWTPREAGAWQVDQKPLVGHTNSVEDLQWSP--------GEKRVLASCSVDLSIRIWDT 349
IW+ ++ A D L H+ + ++WSP +LAS S D ++R+WD
Sbjct: 387 KIWSMKQ-DACVHD---LQAHSKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWD- 441
Query: 350 RVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKH 409
+ C+ TL H V ++++ + SG D C+H+W+ + GS V +++
Sbjct: 442 --VERGVCIHTLTK-HQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQ---SGSLVHSYRG 495
Query: 410 HTAPVTTVEWHPTESSTFASGGADDQIALWDL 441
T + V W+ AS +D + + DL
Sbjct: 496 -TGGIFEVCWNARGDKVGASA-SDGSVCVLDL 525
>UNIPROTKB|F1NII4 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 PRINTS:PR00319 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:AADN02025808 EMBL:AADN02025807
IPI:IPI00592422 ProteinModelPortal:F1NII4
Ensembl:ENSGALT00000007475 Uniprot:F1NII4
Length = 498
Score = 177 (67.4 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 49/158 (31%), Positives = 71/158 (44%)
Query: 285 PGVLATGDCKRNIHIWTPREAGAWQVDQKPL---VGHTNSVEDLQWSPGEKRVLASCSVD 341
P L +G + +W P E D+KPL GH + + +SP + R++AS S D
Sbjct: 354 PERLVSGSDDFTLFLWRPAE------DKKPLERMTGHQALINQVLFSP-DTRIIASASFD 406
Query: 342 LSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKG 401
SI++W+ R LT H S V I+W+ L+VSG D + VWD K
Sbjct: 407 KSIKLWEGRT----GKYLTSLRGHVSAVYQIAWSADSRLLVSGSSDSTLKVWDAETKKLA 462
Query: 402 SSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALW 439
+ H V +W P + ASGG D + +W
Sbjct: 463 IDLPG---HADEVFATDWSP-DGQRVASGGKDKCLRIW 496
Score = 150 (57.9 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 53/159 (33%), Positives = 73/159 (45%)
Query: 264 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRN-IHIWTPREAGAWQVDQKPLVGHTNSV 322
P F+ GH ++ WS + LA+G CK + I +W P Q+ + L GH+ +
Sbjct: 161 PQFTAKGHRHWVLSIAWSP-DGKKLASG-CKNSQIFLWDPATGN--QIG-RVLTGHSKWI 215
Query: 323 EDLQWSP----GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTE 378
L W P E R LAS S D SIRIWDT ++ +LT HT V + W +
Sbjct: 216 TCLCWEPLHINPECRYLASASKDGSIRIWDT-LMGRCDKILT---GHTQSVTCVKWGG-D 270
Query: 379 PLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTV 417
L+ S D I VW R + G T + H V T+
Sbjct: 271 GLLYSSSQDRTIKVW---RSQDGILCRTLQGHAHWVNTM 306
Score = 125 (49.1 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 42/139 (30%), Positives = 63/139 (45%)
Query: 315 LVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISW 374
L GHT +V + +SP K LAS S D ++R WD ++T++ T H V I+W
Sbjct: 123 LEGHTEAVISVAFSPTGK-YLASGSGDTTVRFWD---LSTETPQFTA-KGHRHWVLSIAW 177
Query: 375 NRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPT----ESSTFASG 430
+ + SG + I +WD + V T H+ +T + W P E AS
Sbjct: 178 SPDGKKLASGCKNSQIFLWDPATGNQIGRVLT--GHSKWITCLCWEPLHINPECRYLASA 235
Query: 431 GADDQIALWDLAVERDSEI 449
D I +WD + R +I
Sbjct: 236 SKDGSIRIWDTLMGRCDKI 254
Score = 117 (46.2 bits), Expect = 7.6e-06, Sum P(2) = 7.6e-06
Identities = 44/178 (24%), Positives = 66/178 (37%)
Query: 267 SFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQ 326
S GH ++ +S T LA+G + W + + Q GH + V +
Sbjct: 122 SLEGHTEAVISVAFSPTGK-YLASGSGDTTVRFWDL----STETPQFTAKGHRHWVLSIA 176
Query: 327 WSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWN--RTEP---LI 381
WSP K++ + C + I +WD N +LT H+ + + W P +
Sbjct: 177 WSPDGKKLASGCK-NSQIFLWDPATGNQIGRVLT---GHSKWITCLCWEPLHINPECRYL 232
Query: 382 VSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALW 439
S DG I +WD G HT VT V+W S D I +W
Sbjct: 233 ASASKDGSIRIWDTLM---GRCDKILTGHTQSVTCVKWGG--DGLLYSSSQDRTIKVW 285
Score = 98 (39.6 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 29/93 (31%), Positives = 41/93 (44%)
Query: 350 RVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKH 409
RV C +L HT V ++++ T + SG D + WDL + T K
Sbjct: 112 RVRAVTRCTSSL-EGHTEAVISVAFSPTGKYLASGSGDTTVRFWDL---STETPQFTAKG 167
Query: 410 HTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442
H V ++ W P + ASG + QI LWD A
Sbjct: 168 HRHWVLSIAWSP-DGKKLASGCKNSQIFLWDPA 199
Score = 69 (29.3 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 21/70 (30%), Positives = 34/70 (48%)
Query: 704 LATGDCKRNIHIWTPREAGAWQVDQKPL---VGHTNSVEDLQWSPGEKRVLASCSVDRSN 760
L +G + +W P E D+KPL GH + + +SP + R++AS S D+S
Sbjct: 357 LVSGSDDFTLFLWRPAE------DKKPLERMTGHQALINQVLFSP-DTRIIASASFDKSI 409
Query: 761 RIGARRDMLY 770
++ R Y
Sbjct: 410 KLWEGRTGKY 419
Score = 61 (26.5 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 20/63 (31%), Positives = 28/63 (44%)
Query: 703 VLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRI 762
+L +G + +W E +D L GH + V WSP +RV AS D+ RI
Sbjct: 441 LLVSGSSDSTLKVWDA-ETKKLAID---LPGHADEVFATDWSPDGQRV-ASGGKDKCLRI 495
Query: 763 GAR 765
R
Sbjct: 496 WRR 498
Score = 60 (26.2 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 16/60 (26%), Positives = 31/60 (51%)
Query: 703 VLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRI 762
++A+ ++I +W R G + L GH ++V + WS + R+L S S D + ++
Sbjct: 399 IIASASFDKSIKLWEGR-TGKYLTS---LRGHVSAVYQIAWS-ADSRLLVSGSSDSTLKV 453
Score = 54 (24.1 bits), Expect = 7.1e-08, Sum P(2) = 7.1e-08
Identities = 13/31 (41%), Positives = 16/31 (51%)
Query: 654 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIW 684
GH E FA DWS V A+G + + IW
Sbjct: 467 GHADEVFATDWSPDGQRV-ASGGKDKCLRIW 496
Score = 48 (22.0 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 9/36 (25%), Positives = 19/36 (52%)
Query: 649 LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIW 684
L S GH++ + + WS+ + +L +G + +W
Sbjct: 420 LTSLRGHVSAVYQIAWSA-DSRLLVSGSSDSTLKVW 454
Score = 38 (18.4 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 192 LATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQW 231
LA+ +I IW + + D K L GHT S ++W
Sbjct: 232 LASASKDGSIRIW---DTLMGRCD-KILTGHTQSVTCVKW 267
>TAIR|locus:2060560 [details] [associations]
symbol:LIS "AT2G41500" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS;RCA] [GO:0001709 "cell fate
determination" evidence=IMP] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0016607 "nuclear speck" evidence=IDA] [GO:0007267
"cell-cell signaling" evidence=IMP] [GO:0009553 "embryo sac
development" evidence=IMP] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0000741 "karyogamy" evidence=RCA] [GO:0006312
"mitotic recombination" evidence=RCA] [GO:0006396 "RNA processing"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0009909 "regulation of flower development" evidence=RCA]
[GO:0009933 "meristem structural organization" evidence=RCA]
[GO:0010162 "seed dormancy process" evidence=RCA] [GO:0010182
"sugar mediated signaling pathway" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010388 "cullin deneddylation" evidence=RCA]
[GO:0016567 "protein ubiquitination" evidence=RCA] [GO:0016571
"histone methylation" evidence=RCA] [GO:0016579 "protein
deubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007267 GO:GO:0005681
EMBL:AC002510 GO:GO:0000398 GO:GO:0001709 EMBL:AC004625
InterPro:IPR027106 PANTHER:PTHR19846 InterPro:IPR014906
Pfam:PF08799 EMBL:BT008700 EMBL:BT020589 EMBL:AK229530
IPI:IPI00545392 PIR:T00806 RefSeq:NP_181681.1 UniGene:At.12395
UniGene:At.42825 ProteinModelPortal:O22212 SMR:O22212 STRING:O22212
PaxDb:O22212 PRIDE:O22212 EnsemblPlants:AT2G41500.1 GeneID:818748
KEGG:ath:AT2G41500 GeneFarm:4669 TAIR:At2g41500
HOGENOM:HOG000157615 InParanoid:O22212 KO:K12662 OMA:CIATVSH
PhylomeDB:O22212 ProtClustDB:CLSN2683778 Genevestigator:O22212
GermOnline:AT2G41500 GO:GO:0009560 Uniprot:O22212
Length = 554
Score = 172 (65.6 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 57/183 (31%), Positives = 83/183 (45%)
Query: 303 REAGAWQVDQKPLV---GHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCML 359
R A W+ D L GH + + + + P K L + S D + R+WD INT + +L
Sbjct: 320 RTAKLWKTDGTLLQTFEGHLDRLARVAFHPSGK-YLGTTSYDKTWRLWD---INTGAELL 375
Query: 360 TLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEW 419
L H+ V I++ + L S G D VWDLR G S+ F+ H PV +V +
Sbjct: 376 -LQEGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRT---GRSILVFQGHIKPVFSVNF 431
Query: 420 HPTESSTFASGGADDQIALWDLAVERDSEIEQREAEL----KDLPSQLLFIHLGQKEIKE 475
P ASGG D+Q +WDL + + I A L K P + F+ ++K
Sbjct: 432 SPN-GYHLASGGEDNQCRIWDLRMRKSLYIIPAHANLVSQVKYEPQEGYFLATASYDMKV 490
Query: 476 LHW 478
W
Sbjct: 491 NIW 493
>POMBASE|SPAC144.13c [details] [associations]
symbol:srw1 "CDK inhibitor Srw1" species:4896
"Schizosaccharomyces pombe" [GO:0000750 "pheromone-dependent signal
transduction involved in conjugation with cellular fusion"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IDA] [GO:0007092 "activation of
mitotic anaphase-promoting complex activity" evidence=TAS]
[GO:0008054 "cyclin catabolic process" evidence=IMP] [GO:0030996
"cell cycle arrest in response to nitrogen starvation"
evidence=IMP] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045736 "negative regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IC] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPAC144.13c GO:GO:0005634
GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0000750 GO:GO:0008054
GO:GO:0007092 GO:GO:0045736 GO:GO:0031137 HOGENOM:HOG000195514
KO:K03364 OrthoDB:EOG43FM5B GO:GO:0030996 EMBL:AB005589
EMBL:AB001285 PIR:T37680 RefSeq:NP_594674.1
ProteinModelPortal:O13286 STRING:O13286 EnsemblFungi:SPAC144.13c.1
GeneID:2542824 KEGG:spo:SPAC144.13c OMA:PMATANL NextBio:20803866
Uniprot:O13286
Length = 556
Score = 172 (65.6 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 51/155 (32%), Positives = 74/155 (47%)
Query: 288 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIW 347
LA G ++ IW +A + + + GHT V L W+ VL+S D I
Sbjct: 306 LAVGTHNGSVEIW---DAATCK-KTRTMSGHTERVGALSWND---HVLSSGGRDNHILHR 358
Query: 348 DTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATF 407
D R +LT AH +V + WN E L+ SGG+D + VWD +F++ + +F
Sbjct: 359 DVRAPEHYFRVLT---AHRQEVCGLEWNSNENLLASGGNDNALMVWD--KFEE-KPLYSF 412
Query: 408 KHHTAPVTTVEWHPTESSTFASGG--ADDQIALWD 440
+H A V + W P + ASGG AD I LW+
Sbjct: 413 HNHIAAVKAITWSPHQRGILASGGGTADRTIKLWN 447
Score = 121 (47.7 bits), Expect = 0.00077, P = 0.00077
Identities = 60/251 (23%), Positives = 103/251 (41%)
Query: 171 SFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQ 230
+ SGH A+ W+ VL++G R+ HI R+ A + + L H L+
Sbjct: 328 TMSGHTERVGALSWNDH---VLSSGG--RDNHI-LHRDVRAPEHYFRVLTAHRQEVCGLE 381
Query: 231 WSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLAT 290
W+ + L + + L +K K PL+SF H+ A+ WS + G+LA+
Sbjct: 382 WNSNENLLASGGNDNALMVWDKFEEK-------PLYSFHNHIAAVKAITWSPHQRGILAS 434
Query: 291 GD--CKRNIHIW-TPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCS-VDLSIRI 346
G R I +W T R + +D G + V +L WS +++ ++ + +
Sbjct: 435 GGGTADRTIKLWNTQRGSMLHNID----TG--SQVCNLLWSKQTNEFISTHGFMENEVAL 488
Query: 347 WDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVAT 406
W+ ++ TL HT V ++ + IV+G D + W L K S +T
Sbjct: 489 WNYPSVSRVG---TL-KGHTDRVLYLAMSPNGENIVTGAADETLRFWKLFDSKSKHSAST 544
Query: 407 FKHHTAPVTTV 417
P +
Sbjct: 545 MSSPFDPTMKI 555
Score = 120 (47.3 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 46/168 (27%), Positives = 74/168 (44%)
Query: 278 MDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLAS 337
+DW +LA R +++W+ + +V T++V L+W LA
Sbjct: 256 LDWGQCN--MLAVALASR-VYLWSGISS---EVTVMHNFYPTDTVTSLRWVQRGTH-LAV 308
Query: 338 CSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRR 397
+ + S+ IWD M + HT V +SWN + ++ SGG D I D+R
Sbjct: 309 GTHNGSVEIWDAATCKKTRTM----SGHTERVGALSWN--DHVLSSGGRDNHILHRDVRA 362
Query: 398 FKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVER 445
+ V T H V +EW+ E+ ASGG D+ + +WD E+
Sbjct: 363 PEHYFRVLTA--HRQEVCGLEWNSNEN-LLASGGNDNALMVWDKFEEK 407
Score = 84 (34.6 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 30/117 (25%), Positives = 49/117 (41%)
Query: 648 PLFSFSGHLTEGFAMDWSSTEPGVLATGD--CKRNIHIW-TPREAGAWSVYLYTNRFGVL 704
PL+SF H+ A+ WS + G+LA+G R I +W T R + ++ + +L
Sbjct: 408 PLYSFHNHIAAVKAITWSPHQRGILASGGGTADRTIKLWNTQRGSMLHNIDTGSQVCNLL 467
Query: 705 ATGDCKRNI--HIWTPREAGAWQVDQKPLVG----HTNSVEDLQWSPGEKRVLASCS 755
+ I H + E W VG HT+ V L SP + ++ +
Sbjct: 468 WSKQTNEFISTHGFMENEVALWNYPSVSRVGTLKGHTDRVLYLAMSPNGENIVTGAA 524
>CGD|CAL0005992 [details] [associations]
symbol:orf19.3581 species:5476 "Candida albicans" [GO:0042393
"histone binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0006335
"DNA replication-dependent nucleosome assembly" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0005992 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 EMBL:AACQ01000094
EMBL:AACQ01000093 InterPro:IPR022052 Pfam:PF12265
HOGENOM:HOG000160330 RefSeq:XP_714940.1 RefSeq:XP_715003.1
ProteinModelPortal:Q59ZD9 STRING:Q59ZD9 GeneID:3643390
GeneID:3643420 KEGG:cal:CaO19.11065 KEGG:cal:CaO19.3581
Uniprot:Q59ZD9
Length = 435
Score = 157 (60.3 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 54/220 (24%), Positives = 97/220 (44%)
Query: 177 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLG-GHTNSAEDLQWSDLK 235
T+ FA+DW+ G+L + D ++++ ++ + +++ + D++W
Sbjct: 219 TDIFAIDWNRNSEGLLLSADMNGLVNLYDLKKYESETLNESQYWENNAIGVNDIEWFPTH 278
Query: 236 TALQ-TVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCK 294
+L T DD L ++ R + + + G+ A + G LATGD
Sbjct: 279 DSLFCTADDNGWLKLYDT-RNQSAAVQNANI----GNSVNSVACN-PGYATG-LATGDSN 331
Query: 295 RNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINT 354
I +W R + L GH++SV L+W+P +L S S D S+++ D + N
Sbjct: 332 GVIKMWDIRN---FDNSLSELHGHSDSVTQLKWNPKCHNILGSSSSDHSVKLHD--MSND 386
Query: 355 KSCMLTLPNAHTSDVNVISWNRTEP-LIVSGGDDGCIHVW 393
+ L H VN W+ +P ++ S DD +HVW
Sbjct: 387 STIFTHL--GHMLGVNDFDWSYADPWMVASVADDNSLHVW 424
Score = 150 (57.9 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 42/179 (23%), Positives = 88/179 (49%)
Query: 273 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPL-VGHTNSVEDLQWSPGE 331
T+ FA+DW+ G+L + D ++++ ++ + +++ + V D++W P
Sbjct: 219 TDIFAIDWNRNSEGLLLSADMNGLVNLYDLKKYESETLNESQYWENNAIGVNDIEWFPTH 278
Query: 332 KRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGD-DGCI 390
+ + + ++++DTR +S + N S VN ++ N ++ GD +G I
Sbjct: 279 DSLFCTADDNGWLKLYDTR---NQSAAVQNANIGNS-VNSVACNPGYATGLATGDSNGVI 334
Query: 391 HVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEI 449
+WD+R F +S++ H+ VT ++W+P + S +D + L D++ DS I
Sbjct: 335 KMWDIRNFD--NSLSELHGHSDSVTQLKWNPKCHNILGSSSSDHSVKLHDMS--NDSTI 389
Score = 118 (46.6 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 35/142 (24%), Positives = 74/142 (52%)
Query: 316 VGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWD-TRVINTKSCMLT----------LPNA 364
+ H V +++ P + +LAS + ++ I++ TR + K+ +L L N
Sbjct: 154 INHLGDVNKVRYMPQKPNILASANNLGNLVIYERTRHKSFKNTILDDTDLSKVQVRLVNK 213
Query: 365 H---TSDVNVISWNR-TEPLIVSGGDDGCIHVWDLRRFKKGSSVAT--FKHHTAPVTTVE 418
H T+D+ I WNR +E L++S +G ++++DL++++ + + ++++ V +E
Sbjct: 214 HIPSTTDIFAIDWNRNSEGLLLSADMNGLVNLYDLKKYESETLNESQYWENNAIGVNDIE 273
Query: 419 WHPTESSTFASGGADDQIALWD 440
W PT S F + + + L+D
Sbjct: 274 WFPTHDSLFCTADDNGWLKLYD 295
Score = 92 (37.4 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 31/96 (32%), Positives = 45/96 (46%)
Query: 704 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRIG 763
LATGD I +W R + L GH++SV L+W+P +L S S D S ++
Sbjct: 325 LATGDSNGVIKMWDIRN---FDNSLSELHGHSDSVTQLKWNPKCHNILGSSSSDHSVKL- 380
Query: 764 ARRDMLYCFFVSLVHCIFVWLKYQLFVDVYYWAFVD 799
DM S IF L + L V+ + W++ D
Sbjct: 381 --HDM------SNDSTIFTHLGHMLGVNDFDWSYAD 408
Score = 66 (28.3 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 11/38 (28%), Positives = 21/38 (55%)
Query: 649 LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTP 686
+F+ GH+ DWS +P ++A+ ++H+W P
Sbjct: 389 IFTHLGHMLGVNDFDWSYADPWMVASVADDNSLHVWKP 426
Score = 48 (22.0 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 732 VGHTNSVEDLQWSPGEKRVLASCSVDRS 759
+GH V D WS + ++AS + D S
Sbjct: 393 LGHMLGVNDFDWSYADPWMVASVADDNS 420
>UNIPROTKB|B8YE10 [details] [associations]
symbol:TBL1Y "Transducin (Beta)-like 1Y-linked"
species:9544 "Macaca mulatta" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] [GO:0007605 "sensory perception of
sound" evidence=ISS] [GO:0008013 "beta-catenin binding"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006508 GO:GO:0000122 GO:GO:0007605
InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393 GO:GO:0008013
GO:GO:0060070 GO:GO:0005876 KO:K04508 HOGENOM:HOG000220902
HOVERGEN:HBG050240 OrthoDB:EOG412M5M CTD:90665 EMBL:FJ527023
RefSeq:NP_001138540.1 UniGene:Mmu.17760 ProteinModelPortal:B8YE10
STRING:B8YE10 GeneID:100270702 KEGG:mcc:100270702 NextBio:19970520
Uniprot:B8YE10
Length = 520
Score = 176 (67.0 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 76/289 (26%), Positives = 112/289 (38%)
Query: 164 IPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHT 223
IP GH +E F W+ +LA+G IW E G+ Q L H
Sbjct: 163 IPPNKATVLRGHESEVFICAWNPVSD-LLASGSGDSTARIWNLNENGSRASTQLVLR-HC 220
Query: 224 --NSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSG-HLTEGFAMDW 280
D+ + T+L D LA + L S G H FA+ W
Sbjct: 221 IREGGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWTENGNLASTLGQHKGPIFALKW 280
Query: 281 SSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSV 340
+ +L+ G K I IW A Q Q P H+ D+ W ASCS
Sbjct: 281 NKKGNYILSAGVDKTTI-IWDAHTGEAKQ--QFPF--HSAPALDVDWQ--NNTTFASCST 333
Query: 341 DLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKK 400
D+ I + R + + T HT++VN I W+ + L+ S DD + +W + K+
Sbjct: 334 DMCIHV--CR-LGCDRPVKTF-QGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSM---KQ 386
Query: 401 GSSVATFKHHTAPVTTVEWHPTESST--------FASGGADDQIALWDL 441
+ V + H + T++W PT +T AS D + LWD+
Sbjct: 387 DACVHNLQAHRKEIYTIKWSPTGPTTSNPNSSIMLASASFDSTVRLWDM 435
Score = 161 (61.7 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 68/272 (25%), Positives = 112/272 (41%)
Query: 180 FAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQ 239
FA+ W+ +L+ G K I IW A Q Q P H+ A D+ W + T
Sbjct: 276 FALKWNKKGNYILSAGVDKTTI-IWDAHTGEAKQ--QFPF--HSAPALDVDWQNNTTFAS 330
Query: 240 TVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRN--I 297
D + H + G P+ +F GH E A+ W +P + C + +
Sbjct: 331 CSTD---MCIHVCRLGCDR-----PVKTFQGHTNEVNAIKW---DPSGMLLASCSDDMTL 379
Query: 298 HIWTPREAGAWQVDQKPLVGHTNSVEDLQWSP--------GEKRVLASCSVDLSIRIWDT 349
IW+ ++ V L H + ++WSP +LAS S D ++R+WD
Sbjct: 380 KIWSMKQDAC--VHN--LQAHRKEIYTIKWSPTGPTTSNPNSSIMLASASFDSTVRLWD- 434
Query: 350 RVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKH 409
+ C TL H V ++++ + SG D C+H+W+ + GS V +++
Sbjct: 435 --MEQGVCTHTL-RKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQ---SGSLVHSYQG 488
Query: 410 HTAPVTTVEWHPTESSTFASGGADDQIALWDL 441
T + V W+ AS +D + + DL
Sbjct: 489 -TGGIFEVCWNAQGDKVGASA-SDGSVCVLDL 518
Score = 41 (19.5 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 10/32 (31%), Positives = 18/32 (56%)
Query: 672 LATGDCKRNIHIWTPREAGAWSVYLYTNRFGV 703
LA+G + +HIW ++G+ V+ Y G+
Sbjct: 463 LASGSFDKCVHIWNT-QSGSL-VHSYQGTGGI 492
Score = 40 (19.1 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 14/52 (26%), Positives = 23/52 (44%)
Query: 704 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCS 755
LA+G + +HIW + Q G T + ++ W+ +V AS S
Sbjct: 463 LASGSFDKCVHIWNTQSGSLVHSYQ----G-TGGIFEVCWNAQGDKVGASAS 509
>ZFIN|ZDB-GENE-030131-371 [details] [associations]
symbol:wdr12 "WD repeat domain 12" species:7955
"Danio rerio" [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS]
[GO:0005654 "nucleoplasm" evidence=ISS] [GO:0005730 "nucleolus"
evidence=ISS] [GO:0008283 "cell proliferation" evidence=ISS]
[GO:0030687 "preribosome, large subunit precursor" evidence=ISS]
[GO:0070545 "PeBoW complex" evidence=ISS] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-030131-371 GO:GO:0005654 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030687
GO:GO:0070545 GO:GO:0000463 HSSP:P16649 GO:GO:0000466
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464
OMA:LQTRFFT HAMAP:MF_03029 CTD:55759 GeneTree:ENSGT00640000091456
HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM EMBL:BC044198 EMBL:BC067331
EMBL:BC155268 IPI:IPI00501657 RefSeq:NP_955851.1 UniGene:Dr.76721
ProteinModelPortal:Q6NX08 STRING:Q6NX08 PRIDE:Q6NX08 DNASU:321652
Ensembl:ENSDART00000012903 GeneID:321652 KEGG:dre:321652
InParanoid:Q6NX08 NextBio:20807472 Bgee:Q6NX08 Uniprot:Q6NX08
Length = 422
Score = 169 (64.5 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 55/208 (26%), Positives = 94/208 (45%)
Query: 231 WSDLKTALQT-VDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLA 289
WS + T + +++P + K++ + G+ PL + SGH ++ W + A
Sbjct: 216 WSAVPTEEEDEIEEPNR--PRKKQKTEQMGLTRTPLMTLSGHNEAVSSVLWMDADELCSA 273
Query: 290 TGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDT 349
+ D I +W G QK + + + +SP +R LAS S D +R+WD
Sbjct: 274 SWD--HTIRLWDAETGG-----QKSTLSGSKVFNCISYSPLCRR-LASGSTDRHVRLWDP 325
Query: 350 RVINTKSCMLTLPNAHTSDVNVISWNRT-EPLIVSGGDDGCIHVWDLRRFKKGSSVATFK 408
R + +L+L +H V + W + E +VSG D + +WD R K + +
Sbjct: 326 RSKDGSLVLLSL-TSHNGWVTAVRWAPSHEHQLVSGSLDNVVKLWDTRSCK--APLYDLA 382
Query: 409 HHTAPVTTVEWHPTESSTFASGGADDQI 436
H V +W TE+ SGGAD+++
Sbjct: 383 AHEDKVLCADW--TENGLILSGGADNKL 408
Score = 162 (62.1 bits), Expect = 7.8e-09, Sum P(2) = 7.8e-09
Identities = 76/290 (26%), Positives = 114/290 (39%)
Query: 183 DW-SSTEPGV--LATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQW---SDLKT 236
DW SS E + TG + IW+ V GH + +D+ W L +
Sbjct: 102 DWISSVEADSEWILTGSYDKTARIWSMEGKAVMTV-----AGHADVVKDVAWVKRDGLNS 156
Query: 237 ALQT--VDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHL--TEGFAMDWSSTEPGVLATGD 292
L T +D L E N +R K GH + A+D + T+ +G
Sbjct: 157 VLLTASLDQTVMLWEWNSERNK-----VKARHCCRGHAGSVDTIAVDPTRTK---FCSGS 208
Query: 293 CKRNIHIWT---------------PREAGAWQ---VDQKPLV---GHTNSVEDLQWSPGE 331
+ + IW+ PR+ + + + PL+ GH +V + W +
Sbjct: 209 WDKMLKIWSAVPTEEEDEIEEPNRPRKKQKTEQMGLTRTPLMTLSGHNEAVSSVLWMDAD 268
Query: 332 KRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIH 391
+ L S S D +IR+WD KS TL + N IS++ + SG D +
Sbjct: 269 E--LCSASWDHTIRLWDAETGGQKS---TLSGSKV--FNCISYSPLCRRLASGSTDRHVR 321
Query: 392 VWDLRRFKKGSSVA-TFKHHTAPVTTVEWHPTESSTFASGGADDQIALWD 440
+WD R K GS V + H VT V W P+ SG D+ + LWD
Sbjct: 322 LWDPRS-KDGSLVLLSLTSHNGWVTAVRWAPSHEHQLVSGSLDNVVKLWD 370
Score = 131 (51.2 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 33/106 (31%), Positives = 52/106 (49%)
Query: 288 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIW 347
LA+G R++ +W PR V L H V ++W+P + L S S+D +++W
Sbjct: 311 LASGSTDRHVRLWDPRSKDGSLV-LLSLTSHNGWVTAVRWAPSHEHQLVSGSLDNVVKLW 369
Query: 348 DTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVW 393
DTR + K+ + L AH V W LI+SGG D ++ +
Sbjct: 370 DTR--SCKAPLYDLA-AHEDKVLCADWTENG-LILSGGADNKLYTY 411
Score = 48 (22.0 bits), Expect = 7.8e-09, Sum P(2) = 7.8e-09
Identities = 9/37 (24%), Positives = 18/37 (48%)
Query: 648 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIW 684
PL+ + H + DW TE G++ +G ++ +
Sbjct: 377 PLYDLAAHEDKVLCADW--TENGLILSGGADNKLYTY 411
>UNIPROTKB|B7TCI5 [details] [associations]
symbol:TBL1X "Transducin beta-like 1" species:9913 "Bos
taurus" [GO:0006508 "proteolysis" evidence=ISS] [GO:0007605
"sensory perception of sound" evidence=ISS] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0008013 "beta-catenin binding" evidence=ISS]
[GO:0042393 "histone binding" evidence=ISS] [GO:0005876 "spindle
microtubule" evidence=ISS] [GO:0017053 "transcriptional repressor
complex" evidence=ISS] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006508
GO:GO:0003682 GO:GO:0005667 GO:GO:0000122 GO:GO:0044212
GO:GO:0007605 GO:GO:0043627 InterPro:IPR013720 Pfam:PF08513
GO:GO:0042393 GO:GO:0045444 GO:GO:0008013 GO:GO:0060070
GO:GO:0005876 GeneTree:ENSGT00690000102024 KO:K04508
HOGENOM:HOG000220902 HOVERGEN:HBG050240 OrthoDB:EOG412M5M CTD:6907
OMA:RAHSVNN EMBL:FJ195366 EMBL:DAAA02075574 IPI:IPI00717120
RefSeq:NP_001138704.1 UniGene:Bt.27699 STRING:B7TCI5
Ensembl:ENSBTAT00000024105 GeneID:515972 KEGG:bta:515972
NextBio:20872077 Uniprot:B7TCI5
Length = 528
Score = 172 (65.6 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 80/297 (26%), Positives = 118/297 (39%)
Query: 164 IPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPRE---AGAWQVDQKPL- 219
IP GH +E F W+ +LA+G IW E G+ Q+ +
Sbjct: 171 IPPSKATVLRGHESEVFICAWNPVSD-LLASGSGDSTARIWNLNENSNGGSTQLVLRHCI 229
Query: 220 --GGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSG-HLTEGF 276
GGH D+ + T+L D LA + L S G H F
Sbjct: 230 REGGH-----DVPSNKDVTSLDWNSDGTLLATGSYDGFARIWTEDGNLASTLGQHKGPIF 284
Query: 277 AMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLA 336
A+ W+ +L+ G K I IW A Q Q P H+ D+ W A
Sbjct: 285 ALKWNKKGNYILSAGVDKTTI-IWDAHTGEAKQ--QFPF--HSAPALDVDWQ--NNTTFA 337
Query: 337 SCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLR 396
SCS D+ I + R + + T HT++VN I W+ + L+ S DD + +W +
Sbjct: 338 SCSTDMCIHV--CR-LGCDRPVKTF-QGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSM- 392
Query: 397 RFKKGSSVATFKHHTAPVTTVEWHPTESST--------FASGGADDQIALWDLAVER 445
K+ + V + H+ + T++W PT +T AS D + LWD VER
Sbjct: 393 --KQDTCVHDLQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLWD--VER 445
Score = 168 (64.2 bits), Expect = 5.5e-09, P = 5.5e-09
Identities = 67/272 (24%), Positives = 113/272 (41%)
Query: 180 FAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQ 239
FA+ W+ +L+ G K I IW A Q Q P H+ A D+ W + T
Sbjct: 284 FALKWNKKGNYILSAGVDKTTI-IWDAHTGEAKQ--QFPF--HSAPALDVDWQNNTTFAS 338
Query: 240 TVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRN--I 297
D + H + G P+ +F GH E A+ W +P + C + +
Sbjct: 339 CSTD---MCIHVCRLGCDR-----PVKTFQGHTNEVNAIKW---DPSGMLLASCSDDMTL 387
Query: 298 HIWTPREAGAWQVDQKPLVGHTNSVEDLQWSP--------GEKRVLASCSVDLSIRIWDT 349
IW+ ++ L H+ + ++WSP +LAS S D ++R+WD
Sbjct: 388 KIWSMKQ----DTCVHDLQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLWD- 442
Query: 350 RVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKH 409
+ C+ TL H V ++++ + SG D C+H+W+ + GS V +++
Sbjct: 443 --VERGVCLHTLTK-HQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQ---SGSLVHSYRG 496
Query: 410 HTAPVTTVEWHPTESSTFASGGADDQIALWDL 441
T + V W+ AS +D + + DL
Sbjct: 497 -TGGIFEVCWNARGDKVGASA-SDGSVCVLDL 526
Score = 45 (20.9 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 20/82 (24%), Positives = 38/82 (46%)
Query: 676 DCKRNI--HIWTPREAGAWSVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVG 733
D +R + H T + +SV ++ LA+G + +HIW ++G+ + G
Sbjct: 442 DVERGVCLHTLTKHQEPVYSV-AFSPDGKYLASGSFDKCVHIWNT-QSGSLVHSYR---G 496
Query: 734 HTNSVEDLQWSPGEKRVLASCS 755
T + ++ W+ +V AS S
Sbjct: 497 -TGGIFEVCWNARGDKVGASAS 517
Score = 41 (19.5 bits), Expect = 7.5e-09, Sum P(2) = 7.5e-09
Identities = 10/32 (31%), Positives = 18/32 (56%)
Query: 672 LATGDCKRNIHIWTPREAGAWSVYLYTNRFGV 703
LA+G + +HIW ++G+ V+ Y G+
Sbjct: 471 LASGSFDKCVHIWNT-QSGSL-VHSYRGTGGI 500
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 167 (63.8 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 71/278 (25%), Positives = 125/278 (44%)
Query: 267 SFSGHLTEGFAMDWS-STEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDL 325
+ GH G M+ +T+ +L + + + +W E G +V K L GHT+ V
Sbjct: 104 TLKGH--SGAVMELHYNTDGSMLFSASTDKTVAVWDS-ETGE-RV--KRLKGHTSFVNSC 157
Query: 326 QWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGG 385
+ +++ + S D ++++WD R K+ + T N T V +++N T I+SGG
Sbjct: 158 YPARRGPQLVCTGSDDGTVKLWDIR---KKAAIQTFQN--TYQVLAVTFNDTSDQIISGG 212
Query: 386 DDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVER 445
D I VWDLR+ K T + H VT + +E S S D+ + +WD+
Sbjct: 213 IDNDIKVWDLRQNKL---TYTMRGHADSVTGLSLS-SEGSYLLSNAMDNTVRVWDVR--- 265
Query: 446 DSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPS 505
+E +K +H +K + W P G+ I+ ++ ++ + D S
Sbjct: 266 --PFAPKERCVKIFQGN---VHNFEKNLLRCSWSPD--GSKIAAGSADRFVY--VWDTTS 316
Query: 506 QLLFIHL-GQK-EIKELHWHPQLPGTIISTANSGFNIF 541
+ + L G I E+ +HP P II +A+S ++
Sbjct: 317 RRILYKLPGHAGSINEVAFHPDEP--IIISASSDKRLY 352
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 167 (63.8 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 71/278 (25%), Positives = 125/278 (44%)
Query: 267 SFSGHLTEGFAMDWS-STEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDL 325
+ GH G M+ +T+ +L + + + +W E G +V K L GHT+ V
Sbjct: 105 TLKGH--SGAVMELHYNTDGSMLFSASTDKTVAVWDS-ETGE-RV--KRLKGHTSFVNSC 158
Query: 326 QWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGG 385
+ +++ + S D ++++WD R K+ + T N T V +++N T I+SGG
Sbjct: 159 YPARRGPQLVCTGSDDGTVKLWDIR---KKAAIQTFQN--TYQVLAVTFNDTSDQIISGG 213
Query: 386 DDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVER 445
D I VWDLR+ K T + H VT + +E S S D+ + +WD+
Sbjct: 214 IDNDIKVWDLRQNKL---TYTMRGHADSVTGLSLS-SEGSYLLSNAMDNTVRVWDVR--- 266
Query: 446 DSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPS 505
+E +K +H +K + W P G+ I+ ++ ++ + D S
Sbjct: 267 --PFAPKERCVKIFQGN---VHNFEKNLLRCSWSPD--GSKIAAGSADRFVY--VWDTTS 317
Query: 506 QLLFIHL-GQK-EIKELHWHPQLPGTIISTANSGFNIF 541
+ + L G I E+ +HP P II +A+S ++
Sbjct: 318 RRILYKLPGHAGSINEVAFHPDEP--IILSASSDKRLY 353
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 167 (63.8 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 71/278 (25%), Positives = 125/278 (44%)
Query: 267 SFSGHLTEGFAMDWS-STEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDL 325
+ GH G M+ +T+ +L + + + +W E G +V K L GHT+ V
Sbjct: 105 TLKGH--SGAVMELHYNTDGSMLFSASTDKTVAVWDS-ETGE-RV--KRLKGHTSFVNSC 158
Query: 326 QWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGG 385
+ +++ + S D ++++WD R K+ + T N T V +++N T I+SGG
Sbjct: 159 YPARRGPQLVCTGSDDGTVKLWDIR---KKAAIQTFQN--TYQVLAVTFNDTSDQIISGG 213
Query: 386 DDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVER 445
D I VWDLR+ K T + H VT + +E S S D+ + +WD+
Sbjct: 214 IDNDIKVWDLRQNKL---TYTMRGHADSVTGLSLS-SEGSYLLSNAMDNTVRVWDVR--- 266
Query: 446 DSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPS 505
+E +K +H +K + W P G+ I+ ++ ++ + D S
Sbjct: 267 --PFAPKERCVKIFQGN---VHNFEKNLLRCSWSPD--GSKIAAGSADRFVY--VWDTTS 317
Query: 506 QLLFIHL-GQK-EIKELHWHPQLPGTIISTANSGFNIF 541
+ + L G I E+ +HP P II +A+S ++
Sbjct: 318 RRILYKLPGHAGSINEVAFHPDEP--IILSASSDKRLY 353
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 167 (63.8 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 71/276 (25%), Positives = 120/276 (43%)
Query: 267 SFSGHLTEGFAMDWS-STEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDL 325
+ GH G M+ +T+ +L + + + +W E G +V K L GHT+ V
Sbjct: 105 TLKGH--SGAVMELHYNTDGSMLFSASTDKTVAVWDS-ETGE-RV--KRLKGHTSFVNSC 158
Query: 326 QWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGG 385
+ +++ + S D ++++WD R K+ + T N T V +++N T I+SGG
Sbjct: 159 YPARRGPQLVCTGSDDGTVKLWDIR---KKAAVQTFQN--TYQVLAVTFNDTSDQIISGG 213
Query: 386 DDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVER 445
D I VWDLR+ K T + H VT + +E S S D+ + +WD+
Sbjct: 214 IDNDIKVWDLRQNKL---TYTMRGHADSVTGLSLS-SEGSYLLSNAMDNTVRVWDVR--- 266
Query: 446 DSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPS 505
+E +K +H +K + W P +A+ ++ T S
Sbjct: 267 --PFAPKERCVKIFQGN---VHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRVL 321
Query: 506 QLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIF 541
L H G I E+ +HP P II +A+S ++
Sbjct: 322 YKLPGHAGS--INEVAFHPDEP--IILSASSDKRLY 353
>UNIPROTKB|Q5JKX0 [details] [associations]
symbol:B1147A04.35 "cDNA clone:J013000B23, full insert
sequence" species:39947 "Oryza sativa Japonica Group" [GO:0001700
"embryonic development via the syncytial blastoderm" evidence=ISS]
[GO:0005623 "cell" evidence=ISS] [GO:0009909 "regulation of flower
development" evidence=ISS;IDA] [GO:0031124 "mRNA 3'-end processing"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0001700 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009793 GO:GO:0005623 GO:GO:0009909
GO:GO:0031124 GO:GO:0080008 EMBL:AP003735 EMBL:AK111493
STRING:Q5JKX0 EnsemblPlants:LOC_Os01g72220.1 OMA:FACAISD
Uniprot:Q5JKX0
Length = 527
Score = 164 (62.8 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 54/185 (29%), Positives = 87/185 (47%)
Query: 277 AMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLA 336
+M WS+ E + TGD I W +V++ H SV DL + + +
Sbjct: 12 SMIWSNNE-NWMVTGDDGGAIKYWQSNMNNV-KVNK---TAHRESVRDLSFCRTDLK-FC 65
Query: 337 SCSVDLSIRIWD-TRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDL 395
SCS D ++++WD R +S LT H DV + W+ T+ L+VSGG D + +WD
Sbjct: 66 SCSDDTTVKVWDFARCQEERS--LT---GHGWDVKSVDWHPTKSLLVSGGKDYLVKLWDA 120
Query: 396 RRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIA-LWDLAVERDSEIEQREA 454
K G + +F H V V+W+ ++ + + DQI L+D+ + E+E
Sbjct: 121 ---KSGRELRSFHGHKNIVQCVKWN--QNGNWVLTASKDQIIKLYDIRSMK--ELESFRG 173
Query: 455 ELKDL 459
KD+
Sbjct: 174 HNKDV 178
Score = 160 (61.4 bits), Expect = 8.9e-09, Sum P(2) = 8.9e-09
Identities = 39/144 (27%), Positives = 65/144 (45%)
Query: 311 DQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVN 370
+++ L GH V+ + W P K +L S D +++WD + L + H + V
Sbjct: 83 EERSLTGHGWDVKSVDWHP-TKSLLVSGGKDYLVKLWDAK----SGRELRSFHGHKNIVQ 137
Query: 371 VISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASG 430
+ WN+ +++ D I ++D+R K+ + +F+ H VT + WHP F SG
Sbjct: 138 CVKWNQNGNWVLTASKDQIIKLYDIRSMKE---LESFRGHNKDVTALAWHPFHEEYFVSG 194
Query: 431 GADDQIALWDLAVERDSEIEQREA 454
D I W L +IE A
Sbjct: 195 SYDGAIFHW-LVGHETPQIEINNA 217
Score = 53 (23.7 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 17/48 (35%), Positives = 23/48 (47%)
Query: 633 EHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRN 680
++N + +G G P +F+G GF M ST PG TG RN
Sbjct: 258 KYNSGQMQGYGDQHP---AFAGRAMGGFQMPEPSTTPGPFNTG-LSRN 301
Score = 47 (21.6 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 13/32 (40%), Positives = 15/32 (46%)
Query: 734 HTNSVEDLQWSPGEKRVLASCSVDRSNRIGAR 765
H NSV DL W P +L S D + R R
Sbjct: 218 HDNSVWDLAWHP-VGYLLCSGGNDHATRFWCR 248
Score = 43 (20.2 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 628 PFQLAEHNKKRGKGPGIPT--PPL 649
P ++H ++R PG+P PPL
Sbjct: 313 PLDGSDHGEQRPSIPGLPPGQPPL 336
Score = 42 (19.8 bits), Expect = 4.4e-08, Sum P(2) = 4.4e-08
Identities = 9/25 (36%), Positives = 10/25 (40%)
Query: 733 GHTNSVEDLQWSPGEKRVLASCSVD 757
GH V L W P + S S D
Sbjct: 173 GHNKDVTALAWHPFHEEYFVSGSYD 197
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 179 (68.1 bits), Expect = 5.1e-09, Sum P(2) = 5.1e-09
Identities = 40/135 (29%), Positives = 71/135 (52%)
Query: 307 AWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHT 366
+W++ + +V H+++V L R+LA+ D + IW ++ +C+++L HT
Sbjct: 10 SWKLQE--IVAHSSNVSSLVLGKSSGRLLATGGEDCRVNIW---AVSKPNCIMSL-TGHT 63
Query: 367 SDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESST 426
S V I +N +E +V+G G + +WDL K + T H A ++++++HP
Sbjct: 64 SAVGCIQFNSSEERVVAGSLSGSLRLWDLEAAK---ILRTLMGHKASISSLDFHPM-GEY 119
Query: 427 FASGGADDQIALWDL 441
ASG D I LWD+
Sbjct: 120 LASGSVDSNIKLWDV 134
Score = 171 (65.3 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 57/182 (31%), Positives = 93/182 (51%)
Query: 265 LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVED 324
L + GH ++D+ LA+G NI +W R G V + GHT +V
Sbjct: 98 LRTLMGHKASISSLDFHPMGE-YLASGSVDSNIKLWDVRRKGC--VFRYK--GHTQAVRC 152
Query: 325 LQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSG 384
L +SP K LAS S D ++++WD +I K M+T +HTS VNV+ ++ E L+ SG
Sbjct: 153 LAFSPDGKW-LASASDDSTVKLWD--LIAGK--MITEFTSHTSAVNVVQFHPNEYLLASG 207
Query: 385 GDDGCIHVWDLRRFKK-GSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAV 443
D + +WDL +F GSS + T V +V ++P S ++ G+++ + ++
Sbjct: 208 SADRTVKLWDLEKFNMIGSS----EGETGVVRSVLFNPDGSCLYS--GSENTLRVYGWEP 261
Query: 444 ER 445
+R
Sbjct: 262 DR 263
Score = 39 (18.8 bits), Expect = 5.1e-09, Sum P(2) = 5.1e-09
Identities = 7/23 (30%), Positives = 13/23 (56%)
Query: 694 VYLYTNRFGVLATGDCKRNIHIW 716
V + N + +LA+G R + +W
Sbjct: 195 VQFHPNEY-LLASGSADRTVKLW 216
>UNIPROTKB|B4DRT0 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016581 EMBL:AC114489 UniGene:Hs.16003
HGNC:HGNC:9887 ChiTaRS:RBBP4 EMBL:AK299410 IPI:IPI00983362
SMR:B4DRT0 STRING:B4DRT0 Ensembl:ENST00000544435 UCSC:uc010ohj.2
HOVERGEN:HBG103193 Uniprot:B4DRT0
Length = 173
Score = 146 (56.5 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 40/156 (25%), Positives = 69/156 (44%)
Query: 299 IWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCM 358
IW R + + HT V L ++P + +LA+ S D ++ +WD R + K
Sbjct: 2 IWDTRSNNTSKPSHS-VDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK--- 57
Query: 359 LTLPNAHTSDVNVISWN-RTEPLIVSGGDDGCIHVWDLRRF---------KKGSSVATFK 408
L +H ++ + W+ E ++ S G D ++VWDL + + G F
Sbjct: 58 LHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFI 117
Query: 409 H--HTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442
H HTA ++ W+P E S D+ + +W +A
Sbjct: 118 HGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMA 153
Score = 144 (55.7 bits), Expect = 6.8e-09, P = 6.8e-09
Identities = 34/143 (23%), Positives = 61/143 (42%)
Query: 264 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVE 323
P S H E + ++ +LATG + + +W R ++ H + +
Sbjct: 13 PSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL---KLKLHSFESHKDEIF 69
Query: 324 DLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSC----------MLTLPNAHTSDVNVIS 373
+QWSP + +LAS D + +WD I + +L + HT+ ++ S
Sbjct: 70 QVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFS 129
Query: 374 WNRTEPLIV-SGGDDGCIHVWDL 395
WN EP ++ S +D + VW +
Sbjct: 130 WNPNEPWVICSVSEDNIMQVWQM 152
Score = 112 (44.5 bits), Expect = 0.00038, P = 0.00038
Identities = 46/170 (27%), Positives = 71/170 (41%)
Query: 392 VWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQ 451
+WD R + HTA V + ++P A+G AD +ALWDL
Sbjct: 2 IWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL---------- 51
Query: 452 REAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSG--FNIF-----------R 498
R +LK L S + EI ++ W P TI++++ + N++
Sbjct: 52 RNLKLK-LHS----FESHKDEIFQVQWSPHNE-TILASSGTDRRLNVWDLSKIGEEQSPE 105
Query: 499 TISDLPSQLLFIHLGQK-EIKELHWHPQLPGTIISTANSGFNIFRTISMS 547
D P +LLFIH G +I + W+P P I S + NI + M+
Sbjct: 106 DAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED--NIMQVWQMA 153
>ZFIN|ZDB-GENE-040426-1192 [details] [associations]
symbol:tbl1xr1 "transducin (beta)-like 1 X-linked
receptor 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040426-1192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 GeneTree:ENSGT00690000102024
EMBL:CT027646 IPI:IPI00854144 Ensembl:ENSDART00000085132
Bgee:F1Q5U2 Uniprot:F1Q5U2
Length = 511
Score = 166 (63.5 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 74/289 (25%), Positives = 111/289 (38%)
Query: 164 IPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHT 223
IP GH +E F W+ +LA+G IW E+ Q L H
Sbjct: 153 IPASKAMVLRGHESEVFICAWNPVSD-LLASGSGDSTARIWNLSESSTGGSTQLVLR-HC 210
Query: 224 --NSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSG-HLTEGFAMDW 280
+D+ + T+L + LA + L S G H FA+ W
Sbjct: 211 IREGGQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIWTKDGNLASTLGQHKGPIFALKW 270
Query: 281 SSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSV 340
+ +L+ G K I IW A Q Q P H+ D+ W ASCS
Sbjct: 271 NKKGNFILSAGVDKTTI-IWDAHTGEAKQ--QFPF--HSAPALDVDWQ--SNNTFASCST 323
Query: 341 DLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKK 400
D+ I + + + + T HT++VN I W+ T L+ S DD + +W + K+
Sbjct: 324 DMCIHVCK---LGQERPIKTF-QGHTNEVNAIKWDPTGNLLASCSDDMTLKLWSM---KQ 376
Query: 401 GSSVATFKHHTAPVTTVEWHPTESST--------FA-SGGADDQIALWD 440
+ V + H+ + T++W PT T A S D + LWD
Sbjct: 377 DTCVHDLQAHSKEIYTIKWSPTGPGTNNPNANLMLARSASFDSTVRLWD 425
Score = 124 (48.7 bits), Expect = 0.00032, P = 0.00032
Identities = 60/236 (25%), Positives = 88/236 (37%)
Query: 172 FSGHLTEGFAMDWSSTEPGVLATGD-CKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQ 230
F H +DW S + D C IH+ + G + K GHTN ++
Sbjct: 300 FPFHSAPALDVDWQSNNTFASCSTDMC---IHVC---KLGQ-ERPIKTFQGHTNEVNAIK 352
Query: 231 WSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPG---- 286
W L + D L + K+ + H E + + WS T PG
Sbjct: 353 WDPTGNLLASCSDDMTLKLWSMKQDTC-------VHDLQAHSKEIYTIKWSPTGPGTNNP 405
Query: 287 ----VLA-TGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVD 341
+LA + + +W E GA L H V + +SP + R LAS S D
Sbjct: 406 NANLMLARSASFDSTVRLWDA-ERGACI---HTLTKHQEPVYSVAFSP-DGRHLASGSFD 460
Query: 342 LSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRR 397
+ IW NT+S L T + + WN T + + DG + V DLR+
Sbjct: 461 KCVHIW-----NTQSGALVNSYRGTGGIFEVCWNSTGDKVGASASDGSVCVLDLRK 511
Score = 49 (22.3 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 25/83 (30%), Positives = 40/83 (48%)
Query: 676 DCKRN--IHIWTPREAGAWSVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVG 733
D +R IH T + +SV ++ LA+G + +HIW ++GA + G
Sbjct: 425 DAERGACIHTLTKHQEPVYSV-AFSPDGRHLASGSFDKCVHIWNT-QSGALVNSYR---G 479
Query: 734 HTNSVEDLQW-SPGEKRVLASCS 755
T + ++ W S G+K V AS S
Sbjct: 480 -TGGIFEVCWNSTGDK-VGASAS 500
Score = 42 (19.8 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 672 LATGDCKRNIHIWTPREAGAWSVYLYTNR-FGVL--ATGD 708
LA+G + +HIW + + Y T F V +TGD
Sbjct: 454 LASGSFDKCVHIWNTQSGALVNSYRGTGGIFEVCWNSTGD 493
>DICTYBASE|DDB_G0285601 [details] [associations]
symbol:cdc20 "cdc20/fizzy domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 UniPathway:UPA00143
dictyBase:DDB_G0285601 GO:GO:0005634 GO:GO:0045335 GO:GO:0051301
GO:GO:0007067 GenomeReviews:CM000153_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
EMBL:AAFI02000079 eggNOG:COG2319 GO:GO:0016567 RefSeq:XP_638150.1
ProteinModelPortal:Q54MZ3 STRING:Q54MZ3 EnsemblProtists:DDB0237885
GeneID:8625198 KEGG:ddi:DDB_G0285601 KO:K03363 OMA:DAGTYSI
ProtClustDB:CLSZ2430186 Uniprot:Q54MZ3
Length = 499
Score = 168 (64.2 bits), Expect = 5.0e-09, P = 5.0e-09
Identities = 50/166 (30%), Positives = 79/166 (47%)
Query: 277 AMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLA 336
++ W+ + LA G I +W A +V + L GH V L W+ +L+
Sbjct: 228 SLQWTK-DGNYLAVGTNSCTIQLWDV--AHTKKV--RELRGHAGRVGALAWND---YILS 279
Query: 337 SCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLR 396
S S D +I D RV N + TL + H+ +V + W+ + SGG+D I++WD+
Sbjct: 280 SGSSDTNIFNHDVRVQNHH--VSTL-SGHSQEVCGLKWSHDGGQLASGGNDNIINIWDIN 336
Query: 397 RFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGG--ADDQIALWD 440
+ TF+ HTA V + W P + + A+GG AD I W+
Sbjct: 337 SENFETPAHTFEQHTAAVRALAWCPFQPNLLATGGGAADRTIRFWN 382
Score = 130 (50.8 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 46/170 (27%), Positives = 80/170 (47%)
Query: 278 MDWSSTEPGVLATGDCKRNIHIW---TPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRV 334
+DWSS + G + +++W T +QV+Q+ + + LQW+ +
Sbjct: 187 LDWSSQNVIAIPLG---QTVYLWNATTSEIQRLFQVEQQD-----DYITSLQWTK-DGNY 237
Query: 335 LASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWD 394
LA + +I++WD V +TK + L H V ++WN + ++ SG D I D
Sbjct: 238 LAVGTNSCTIQLWD--VAHTKK-VREL-RGHAGRVGALAWN--DYILSSGSSDTNIFNHD 291
Query: 395 LRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444
+R + V+T H+ V ++W + ASGG D+ I +WD+ E
Sbjct: 292 VR--VQNHHVSTLSGHSQEVCGLKWSH-DGGQLASGGNDNIINIWDINSE 338
Score = 59 (25.8 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 28/123 (22%), Positives = 45/123 (36%)
Query: 648 PLFSFSGHLTEGFAMDWSSTEPGVLATGD--CKRNIHIWTPREAGAWSVYLYTNRFGVLA 705
P +F H A+ W +P +LATG R I W + ++ +
Sbjct: 343 PAHTFEQHTAAVRALAWCPFQPNLLATGGGAADRTIRFWNTITGVCLNTVDTMSQVCSIQ 402
Query: 706 TGDCKRNI---HIWTPREAGAWQ----VDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDR 758
R + H ++ + W+ V L GHT+ SP + V+ S S D
Sbjct: 403 WSTTYRELVSSHGYSQNQLCVWKYPSMVKCAELTGHTSRALHTAISPDGETVV-SASADE 461
Query: 759 SNR 761
+ R
Sbjct: 462 TLR 464
>UNIPROTKB|Q9BQ87 [details] [associations]
symbol:TBL1Y "F-box-like/WD repeat-containing protein
TBL1Y" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 InterPro:IPR013720
Pfam:PF08513 KO:K04508 HOGENOM:HOG000220902 HOVERGEN:HBG050240
OrthoDB:EOG412M5M EMBL:AF332220 EMBL:AF332221 EMBL:AF332222
EMBL:CH471163 EMBL:BC130471 EMBL:BC130473 IPI:IPI00020873
RefSeq:NP_150600.1 RefSeq:NP_599020.1 RefSeq:NP_599021.1
UniGene:Hs.664560 ProteinModelPortal:Q9BQ87 SMR:Q9BQ87
STRING:Q9BQ87 PhosphoSite:Q9BQ87 DMDM:23396873 PaxDb:Q9BQ87
PRIDE:Q9BQ87 Ensembl:ENST00000346432 Ensembl:ENST00000355162
Ensembl:ENST00000383032 GeneID:90665 KEGG:hsa:90665 UCSC:uc004frb.3
CTD:90665 GeneCards:GC0YP006778 HGNC:HGNC:18502 MIM:400033
neXtProt:NX_Q9BQ87 PharmGKB:PA38564 InParanoid:Q9BQ87 OMA:VHSYQGT
PhylomeDB:Q9BQ87 GenomeRNAi:90665 NextBio:76909 ArrayExpress:Q9BQ87
Bgee:Q9BQ87 CleanEx:HS_TBL1Y Genevestigator:Q9BQ87
GermOnline:ENSG00000092377 Uniprot:Q9BQ87
Length = 522
Score = 172 (65.6 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 80/309 (25%), Positives = 123/309 (39%)
Query: 150 QLAEHNKKRGKGPGIPTPPLFS--FSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPR 207
++ H+K + PP + GH +E F W+ +LA+G IW
Sbjct: 151 EINNHSKPMEIDGDVEIPPNKATVLRGHESEVFICAWNPVSD-LLASGSGDSTARIWNLN 209
Query: 208 E---AGAWQVDQKPL---GGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIP 261
E G+ Q+ + GGH D+ + T+L D LA +
Sbjct: 210 ENSNGGSTQLVLRHCIREGGH-----DVPSNKDVTSLDWNSDGTLLAMGSYDGFARIWTE 264
Query: 262 TPPLFSFSG-HLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTN 320
L S G H FA+ W+ VL+ G K I IW A Q Q P H+
Sbjct: 265 NGNLASTLGQHKGPIFALKWNKKGNYVLSAGVDKTTI-IWDAHTGEAKQ--QFPF--HSA 319
Query: 321 SVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPL 380
D+ W ASCS D+ I + R + + T HT++VN I W+ + L
Sbjct: 320 PALDVDWQ--NNMTFASCSTDMCIHV--CR-LGCDHPVKTF-QGHTNEVNAIKWDPSGML 373
Query: 381 IVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESST--------FASGGA 432
+ S DD + +W + K+ + V + H+ + T++W PT +T AS
Sbjct: 374 LASCSDDMTLKIWSM---KQDACVHDLQAHSKEIYTIKWSPTGPATSNPNSSIMLASASF 430
Query: 433 DDQIALWDL 441
D + LWD+
Sbjct: 431 DSTVRLWDV 439
Score = 42 (19.8 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 10/32 (31%), Positives = 18/32 (56%)
Query: 672 LATGDCKRNIHIWTPREAGAWSVYLYTNRFGV 703
LA+G + +HIW ++G+ V+ Y G+
Sbjct: 467 LASGSFDKYVHIWNT-QSGSL-VHSYQGTGGI 496
Score = 41 (19.5 bits), Expect = 7.2e-09, Sum P(2) = 7.2e-09
Identities = 14/52 (26%), Positives = 23/52 (44%)
Query: 704 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCS 755
LA+G + +HIW + Q G T + ++ W+ +V AS S
Sbjct: 467 LASGSFDKYVHIWNTQSGSLVHSYQ----G-TGGIFEVCWNARGDKVGASAS 513
>UNIPROTKB|E1BV27 [details] [associations]
symbol:TBL1X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003682 "chromatin binding" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0003714
GO:GO:0045892 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0003682 GO:GO:0005667
GO:GO:0044212 GO:GO:0043627 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045444 GeneTree:ENSGT00690000102024 KO:K04508 CTD:6907
OMA:RAHSVNN EMBL:AADN02017315 EMBL:AADN02017316 EMBL:AADN02017317
EMBL:AADN02017318 EMBL:AADN02017319 EMBL:AADN02017320
EMBL:AADN02017321 EMBL:AADN02017322 EMBL:AADN02017323
EMBL:AADN02017324 IPI:IPI00589153 RefSeq:NP_001153226.1
UniGene:Gga.5909 ProteinModelPortal:E1BV27
Ensembl:ENSGALT00000021808 GeneID:426045 KEGG:gga:426045
NextBio:20827776 Uniprot:E1BV27
Length = 523
Score = 169 (64.5 bits), Expect = 6.0e-09, Sum P(2) = 6.0e-09
Identities = 77/293 (26%), Positives = 116/293 (39%)
Query: 164 IPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPRE---AGAWQVDQKPL- 219
IP GH +E F W+ +LA+G IW E +G+ Q+ +
Sbjct: 166 IPPNKATVLRGHESEVFICAWNPVSD-LLASGSGDSTARIWNLNENSNSGSTQLVLRHCI 224
Query: 220 --GGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSG-HLTEGF 276
GGH D+ + T+L D LA + L S G H F
Sbjct: 225 REGGH-----DVPSNKDVTSLDWNSDGTLLATGSYDGFARIWTEDGNLASTLGQHKGPIF 279
Query: 277 AMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLA 336
A+ W+ +L+ G K I IW A Q Q P H+ D+ W A
Sbjct: 280 ALKWNKKGNYILSAGVDKTTI-IWDAHTGEAKQ--QFPF--HSAPALDVDWQ--NNTTFA 332
Query: 337 SCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLR 396
SCS D+ I + R + + T HT++VN I W+ + L+ S DD + +W +
Sbjct: 333 SCSTDMCIHV--CR-LGCDRPVKTF-QGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSM- 387
Query: 397 RFKKGSSVATFKHHTAPVTTVEWHPTESST--------FASGGADDQIALWDL 441
K+ + V + H+ + T++W PT T AS D + LWD+
Sbjct: 388 --KQDTCVHDLQAHSKEIYTIKWSPTGPGTSNPNSNIMLASASFDSTVRLWDV 438
Score = 166 (63.5 bits), Expect = 9.0e-09, P = 9.0e-09
Identities = 67/272 (24%), Positives = 115/272 (42%)
Query: 180 FAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQ 239
FA+ W+ +L+ G K I IW A Q Q P H+ A D+ W + T
Sbjct: 279 FALKWNKKGNYILSAGVDKTTI-IWDAHTGEAKQ--QFPF--HSAPALDVDWQNNTTFAS 333
Query: 240 TVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRN--I 297
D + H + G P+ +F GH E A+ W +P + C + +
Sbjct: 334 CSTD---MCIHVCRLGCDR-----PVKTFQGHTNEVNAIKW---DPSGMLLASCSDDMTL 382
Query: 298 HIWTPREAGAWQVDQKPLVGHTNSVEDLQWSP---GEKR-----VLASCSVDLSIRIWDT 349
IW+ ++ L H+ + ++WSP G +LAS S D ++R+WD
Sbjct: 383 KIWSMKQ----DTCVHDLQAHSKEIYTIKWSPTGPGTSNPNSNIMLASASFDSTVRLWD- 437
Query: 350 RVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKH 409
++ C+ TL H V ++++ + SG D C+H+W+ + G+ V +++
Sbjct: 438 --VDRGVCIHTLTK-HQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQ---SGTLVHSYRG 491
Query: 410 HTAPVTTVEWHPTESSTFASGGADDQIALWDL 441
T + V W+ AS +D + + DL
Sbjct: 492 -TGGIFEVCWNARGDKVGASA-SDGSVCVLDL 521
Score = 122 (48.0 bits), Expect = 0.00055, P = 0.00055
Identities = 59/234 (25%), Positives = 87/234 (37%)
Query: 172 FSGHLTEGFAMDW-SSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQ 230
F H +DW ++T +T C IH+ G + K GHTN ++
Sbjct: 313 FPFHSAPALDVDWQNNTTFASCSTDMC---IHVC---RLGCDR-PVKTFQGHTNEVNAIK 365
Query: 231 WSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLAT 290
W L + D L + K+ + H E + + WS T PG T
Sbjct: 366 WDPSGMLLASCSDDMTLKIWSMKQDTC-------VHDLQAHSKEIYTIKWSPTGPG---T 415
Query: 291 GDCKRNIHIWTPR---EAGAWQVDQ----KPLVGHTNSVEDLQWSPGEKRVLASCSVDLS 343
+ NI + + W VD+ L H V + +SP K LAS S D
Sbjct: 416 SNPNSNIMLASASFDSTVRLWDVDRGVCIHTLTKHQEPVYSVAFSPDGK-YLASGSFDKC 474
Query: 344 IRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRR 397
+ IW NT+S L T + + WN + + DG + V DLR+
Sbjct: 475 VHIW-----NTQSGTLVHSYRGTGGIFEVCWNARGDKVGASASDGSVCVLDLRK 523
Score = 45 (20.9 bits), Expect = 6.0e-09, Sum P(2) = 6.0e-09
Identities = 19/75 (25%), Positives = 34/75 (45%)
Query: 681 IHIWTPREAGAWSVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVED 740
IH T + +SV ++ LA+G + +HIW ++G + G T + +
Sbjct: 444 IHTLTKHQEPVYSV-AFSPDGKYLASGSFDKCVHIWNT-QSGTLVHSYR---G-TGGIFE 497
Query: 741 LQWSPGEKRVLASCS 755
+ W+ +V AS S
Sbjct: 498 VCWNARGDKVGASAS 512
Score = 40 (19.1 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 672 LATGDCKRNIHIWTPREAGAWSVYLYTNRFGV 703
LA+G + +HIW ++G V+ Y G+
Sbjct: 466 LASGSFDKCVHIWNT-QSGTL-VHSYRGTGGI 495
>FB|FBgn0037569 [details] [associations]
symbol:tex "tex" species:7227 "Drosophila melanogaster"
[GO:0005875 "microtubule associated complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 InterPro:IPR011659
Pfam:PF07676 EMBL:AY118857 ProteinModelPortal:Q8MSF3 SMR:Q8MSF3
STRING:Q8MSF3 PaxDb:Q8MSF3 PRIDE:Q8MSF3 FlyBase:FBgn0037569
InParanoid:Q8MSF3 OrthoDB:EOG4FJ6RC ArrayExpress:Q8MSF3 Bgee:Q8MSF3
Uniprot:Q8MSF3
Length = 320
Score = 163 (62.4 bits), Expect = 6.3e-09, P = 6.3e-09
Identities = 52/175 (29%), Positives = 73/175 (41%)
Query: 267 SFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVE-DL 325
++ GH + W T P AT + + IW R V + V +T ++
Sbjct: 67 TYRGHTASVDQLCWHRTNPDQFATASGDKTVRIWDIR------VGKCVSVTNTKGENINI 120
Query: 326 QWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGG 385
WSP K + DL I DTR T + P + +VN ISWN T L
Sbjct: 121 AWSPDGKTIAVGNKEDL-ITFIDTR---TNKIRVEEP--FSFEVNEISWNNTNDLFFLTN 174
Query: 386 DDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWD 440
GC+H+ + T K H A +E+ PT FA+G AD Q++LWD
Sbjct: 175 GLGCMHILS---YPSLEHQMTLKAHPANCICIEFGPT-GKYFATGSADAQVSLWD 225
Score = 131 (51.2 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 29/94 (30%), Positives = 46/94 (48%)
Query: 364 AHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRR--FKKGSSVATFKHHTAPVTTVEWHP 421
+H S V+ + WN + SG D + V+ L R F KG+ T++ HTA V + WH
Sbjct: 26 SHMSKVHSVCWNADGRYLASGSFDKTVVVYSLERDRFLKGN---TYRGHTASVDQLCWHR 82
Query: 422 TESSTFASGGADDQIALWDLAVERDSEIEQREAE 455
T FA+ D + +WD+ V + + + E
Sbjct: 83 TNPDQFATASGDKTVRIWDIRVGKCVSVTNTKGE 116
>UNIPROTKB|Q6PJI9 [details] [associations]
symbol:WDR59 "WD repeat-containing protein 59" species:9606
"Homo sapiens" [GO:0008150 "biological_process" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006575 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50908
SMART:SM00320 SMART:SM00591 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
Gene3D:3.10.110.10 InterPro:IPR016135 OMA:TGGWNIA EMBL:AK022332
EMBL:AK091316 EMBL:AF370390 EMBL:BC004519 EMBL:BC014887
EMBL:AB067510 IPI:IPI00012257 IPI:IPI00242841 IPI:IPI00644331
IPI:IPI00646489 RefSeq:NP_085058.3 UniGene:Hs.280951
ProteinModelPortal:Q6PJI9 SMR:Q6PJI9 IntAct:Q6PJI9 STRING:Q6PJI9
PhosphoSite:Q6PJI9 DMDM:134035358 PaxDb:Q6PJI9 PRIDE:Q6PJI9
Ensembl:ENST00000262144 GeneID:79726 KEGG:hsa:79726 UCSC:uc002fdf.1
UCSC:uc002fdg.1 CTD:79726 GeneCards:GC16M074908 H-InvDB:HIX0013239
HGNC:HGNC:25706 HPA:HPA041084 neXtProt:NX_Q6PJI9
PharmGKB:PA142670593 HOGENOM:HOG000004834 HOVERGEN:HBG092820
InParanoid:Q6PJI9 OrthoDB:EOG4CNQQ9 GenomeRNAi:79726 NextBio:69094
Bgee:Q6PJI9 CleanEx:HS_WDR59 Genevestigator:Q6PJI9 Uniprot:Q6PJI9
Length = 974
Score = 171 (65.3 bits), Expect = 6.5e-09, P = 6.5e-09
Identities = 35/126 (27%), Positives = 61/126 (48%)
Query: 315 LVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISW 374
L GHT + DL W+ E +L + SVD I IWD + +T+ + L + + + + W
Sbjct: 101 LQGHTRVISDLDWAVFEPDLLVTSSVDTYIYIWDIK--DTRKPTVAL--SAVAGASQVKW 156
Query: 375 NRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADD 434
N+ ++ DG + +WD R K ++V H + + ++WHP A+ D+
Sbjct: 157 NKKNANCLATSHDGDVRIWDKR--KPSTAVEYLAAHLSKIHGLDWHPDSEHILATSSQDN 214
Query: 435 QIALWD 440
+ WD
Sbjct: 215 SVKFWD 220
Score = 126 (49.4 bits), Expect = 0.00046, P = 0.00046
Identities = 35/135 (25%), Positives = 60/135 (44%)
Query: 267 SFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQ 326
+ GH +DW+ EP +L T I+IW ++ V + G ++
Sbjct: 100 TLQGHTRVISDLDWAVFEPDLLVTSSVDTYIYIWDIKDTRKPTVALSAVAG----ASQVK 155
Query: 327 WSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR-TEPLIVSGG 385
W+ LA+ S D +RIWD R +T L AH S ++ + W+ +E ++ +
Sbjct: 156 WNKKNANCLAT-SHDGDVRIWDKRKPSTAVEYLA---AHLSKIHGLDWHPDSEHILATSS 211
Query: 386 DDGCIHVWDLRRFKK 400
D + WD R+ +K
Sbjct: 212 QDNSVKFWDYRQPRK 226
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 164 (62.8 bits), Expect = 6.7e-09, P = 6.7e-09
Identities = 70/278 (25%), Positives = 125/278 (44%)
Query: 267 SFSGHLTEGFAMDWS-STEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDL 325
+ GH G M+ +T+ +L + + + +W E G +V K L GHT+ V
Sbjct: 105 TLKGH--SGAVMELHYNTDGSMLFSASTDKTVAVWDS-ETGE-RV--KRLKGHTSFVNSC 158
Query: 326 QWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGG 385
+ +++ + S D ++++WD R K+ + T N T V +++N T I+SGG
Sbjct: 159 YPARRGPQLVCTGSDDGTVKLWDIR---KKAAIQTFQN--TYQVLAVTFNDTSDQIISGG 213
Query: 386 DDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVER 445
D I VWDLR+ K T + H VT + +E S S D+ + +WD+
Sbjct: 214 IDNDIKVWDLRQNKL---TYTMRGHADSVTGLSLS-SEGSYLLSNAMDNTVRVWDVR--- 266
Query: 446 DSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPS 505
+E ++ +H +K + W P G+ I+ ++ ++ + D S
Sbjct: 267 --PFAPKERCVRIFQGN---VHNFEKNLLRCSWSPD--GSKIAAGSADRFVY--VWDTTS 317
Query: 506 QLLFIHL-GQK-EIKELHWHPQLPGTIISTANSGFNIF 541
+ + L G I E+ +HP P II +A+S ++
Sbjct: 318 RRILYKLPGHAGSINEVAFHPDEP--IILSASSDKRLY 353
>UNIPROTKB|F1SU35 [details] [associations]
symbol:CIAO1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0097361 "CIA complex" evidence=IEA] [GO:0071817 "MMXD
complex" evidence=IEA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016226 GO:GO:0071817 OMA:SWKCVCT
GeneTree:ENSGT00700000104486 EMBL:CU896688
Ensembl:ENSSSCT00000008907 Uniprot:F1SU35
Length = 337
Score = 144 (55.7 bits), Expect = 6.8e-09, Sum P(2) = 6.8e-09
Identities = 41/153 (26%), Positives = 68/153 (44%)
Query: 287 VLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRI 346
+LA+ R++ IW RE +W GH +V + WSP LAS S D + I
Sbjct: 30 LLASCGGDRSVRIWG-REGDSWICKSVLCEGHQRTVRKVAWSPCGN-YLASASFDATTCI 87
Query: 347 WDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVAT 406
W + + C+ TL H ++V ++W + L+ + D + VW+ + S
Sbjct: 88 WKKNKDDFE-CVTTL-EGHENEVKSVAWAPSGNLLATCSRDKSVWVWEGTVENQPSDPTR 145
Query: 407 FKHHTAPVTTVEWHPTESSTFASGGADDQIALW 439
+ + V WHP++ AS DD + L+
Sbjct: 146 VPYKPQSMKKVLWHPSQE-LLASASYDDTVKLY 177
Score = 134 (52.2 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 60/237 (25%), Positives = 105/237 (44%)
Query: 315 LVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISW 374
L GH N V+ + W+P +LA+CS D S+ +W+ V N S +P S V+ W
Sbjct: 101 LEGHENEVKSVAWAPSGN-LLATCSRDKSVWVWEGTVENQPSDPTRVPYKPQSMKKVL-W 158
Query: 375 NRTEPLIVSGGDDGCIHVWDLRRFKKGSSV--ATFKHHTAPVTTVEWHPTESSTFASGGA 432
+ ++ L+ S D + ++ R ++ V AT + H + V ++ + P+ AS
Sbjct: 159 HPSQELLASASYDDTVKLY---REEEDDWVCCATLEGHESTVWSLAFDPS-GQRLASCSD 214
Query: 433 DDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLG---QKEIKELHWHPQLPGTIIST 489
D + +W + + EQ A PS L + I ++ W QL G + +
Sbjct: 215 DRTVRIWRQYLPGN---EQGVACNGSDPSWKCICTLSGFHSRTIYDVAWC-QLTGALATA 270
Query: 490 A-NSGFNIFRTI--SDLPSQLLF---IHLGQKEIKELH---WHPQLPGTIISTANSG 537
+ +F SD P Q F HL Q ++++ W+P+ G + S ++ G
Sbjct: 271 CGDDAIRVFEEDPGSD-PQQPTFSLTAHLPQAHSQDVNCVAWNPKEQGLLASCSDDG 326
Score = 119 (46.9 bits), Expect = 0.00057, P = 0.00057
Identities = 47/179 (26%), Positives = 77/179 (43%)
Query: 280 WSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCS 339
W ++ +LA+ + ++ E W V L GH ++V L + P +R LASCS
Sbjct: 158 WHPSQE-LLASASYDDTVKLYREEEDD-W-VCCATLEGHESTVWSLAFDPSGQR-LASCS 213
Query: 340 VDLSIRIWDTRVINTKS------------CMLTLPNAHTSDVNVISWNR-TEPLIVSGGD 386
D ++RIW + + C+ TL H+ + ++W + T L + GD
Sbjct: 214 DDRTVRIWRQYLPGNEQGVACNGSDPSWKCICTLSGFHSRTIYDVAWCQLTGALATACGD 273
Query: 387 DGCIHVW--DLRRFKKGSSVATFKH----HTAPVTTVEWHPTESSTFASGGADDQIALW 439
D I V+ D + + + H H+ V V W+P E AS D ++A W
Sbjct: 274 DA-IRVFEEDPGSDPQQPTFSLTAHLPQAHSQDVNCVAWNPKEQGLLASCSDDGELAFW 331
Score = 64 (27.6 bits), Expect = 6.8e-09, Sum P(2) = 6.8e-09
Identities = 16/32 (50%), Positives = 21/32 (65%)
Query: 731 LVGHTNSVEDLQWSPGEKRVLASCSVDRSNRI 762
L GH ++V L + P +R LASCS DR+ RI
Sbjct: 190 LEGHESTVWSLAFDPSGQR-LASCSDDRTVRI 220
Score = 60 (26.2 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 734 HTNSVEDLQWSPGEKRVLASCSVD 757
H+ V + W+P E+ +LASCS D
Sbjct: 302 HSQDVNCVAWNPKEQGLLASCSDD 325
Score = 60 (26.2 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 23/77 (29%), Positives = 33/77 (42%)
Query: 616 W-DLKTALQTV--DDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMD-----WSST 667
W L AL T DD ++ E + G P PT FS + HL + + D W+
Sbjct: 260 WCQLTGALATACGDDAIRVFEEDP--GSDPQQPT---FSLTAHLPQAHSQDVNCVAWNPK 314
Query: 668 EPGVLATGDCKRNIHIW 684
E G+LA+ + W
Sbjct: 315 EQGLLASCSDDGELAFW 331
>SGD|S000002304 [details] [associations]
symbol:COP1 "Alpha subunit of COPI vesicle coatomer complex"
species:4932 "Saccharomyces cerevisiae" [GO:0030126 "COPI vesicle
coat" evidence=IEA;ISS;IMP] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0006890 "retrograde
vesicle-mediated transport, Golgi to ER" evidence=IMP] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0000139 "Golgi membrane"
evidence=IEA] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000002304 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006938 GO:GO:0006888
GO:GO:0030126 GO:GO:0006890 GO:GO:0043130 EMBL:X97751
HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 OrthoDB:EOG40VZXP EMBL:Z46617
EMBL:X83754 EMBL:Z74193 EMBL:Z74192 PIR:S67692 RefSeq:NP_010136.1
PDB:3MKQ PDB:3MV2 PDB:3MV3 PDBsum:3MKQ PDBsum:3MV2 PDBsum:3MV3
ProteinModelPortal:P53622 SMR:P53622 DIP:DIP-2582N IntAct:P53622
MINT:MINT-422687 STRING:P53622 PaxDb:P53622 PeptideAtlas:P53622
EnsemblFungi:YDL145C GeneID:851410 KEGG:sce:YDL145C CYGD:YDL145c
OMA:YDQHNPF EvolutionaryTrace:P53622 NextBio:968591
Genevestigator:P53622 GermOnline:YDL145C Uniprot:P53622
Length = 1201
Score = 147 (56.8 bits), Expect = 6.8e-09, Sum P(2) = 6.8e-09
Identities = 34/125 (27%), Positives = 59/125 (47%)
Query: 318 HTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRT 377
H V L + P + + S D +I++W ++T C+ TL H V + ++R
Sbjct: 52 HEGPVRGLDFHPTQP-IFVSAGDDYTIKVWS---LDTNKCLYTL-TGHLDYVRTVFFHRE 106
Query: 378 EPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIA 437
P I+S DD I +W+ + K+ +A H V ++HPT+ S D+ I
Sbjct: 107 LPWIISASDDQTIRIWNWQNRKE---IACLTGHNHFVMCAQFHPTDD-LIVSASLDETIR 162
Query: 438 LWDLA 442
+WD++
Sbjct: 163 IWDIS 167
Score = 135 (52.6 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 56/197 (28%), Positives = 93/197 (47%)
Query: 315 LVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISW 374
L GHT V + P ++ S S D +++W R+ TK+ + HT++V+ + +
Sbjct: 205 LEGHTRGVNWASFHP-TLPLIVSGSDDRQVKLW--RMSATKAWEVDTCRGHTNNVDSVIF 261
Query: 375 NRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADD 434
+ + LI+S G+D + VWDL K + V FK + HP + F G A D
Sbjct: 262 HPHQNLIISVGEDKTLRVWDL---DKRTPVKQFKRENDRFWLIAAHP-HINLF--GAAHD 315
Query: 435 Q-IALWDLAVERD-SEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQ---LPGTIIST 489
I ++ L ER S I Q +QL F++ +K+I+ ++ + LP +
Sbjct: 316 SGIMVFKLDRERPCSFIHQ---------NQLFFVN-AEKQIQSFNFQKRVASLPYASLKG 365
Query: 490 ANSGFNIFRTISDLPSQ 506
++ FR+IS PSQ
Sbjct: 366 IGQPWDAFRSISYNPSQ 382
Score = 77 (32.2 bits), Expect = 6.8e-09, Sum P(2) = 6.8e-09
Identities = 21/88 (23%), Positives = 40/88 (45%)
Query: 675 GDCKRNIHIWTPREAGAWSVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGH 734
GDC + W+ + T ++ +G R + +W AW+VD GH
Sbjct: 197 GDCVVKFILEGHTRGVNWASFHPT--LPLIVSGSDDRQVKLWRMSATKAWEVDT--CRGH 252
Query: 735 TNSVEDLQWSPGEKRVLASCSVDRSNRI 762
TN+V+ + + P + ++ S D++ R+
Sbjct: 253 TNNVDSVIFHPHQNLII-SVGEDKTLRV 279
Score = 60 (26.2 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 23/100 (23%), Positives = 38/100 (38%)
Query: 650 FSFSGHLTEGFAMDWSSTEPGV--LATGDCKRNIHIWTPREAGAWSVYL---YTNRF-GV 703
F GH T G ++W+S P + + +G R + +W AW V +TN V
Sbjct: 203 FILEGH-TRG--VNWASFHPTLPLIVSGSDDRQVKLWRMSATKAWEVDTCRGHTNNVDSV 259
Query: 704 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQW 743
+ I + + W +D++ V D W
Sbjct: 260 IFHPHQNLIISVGEDKTLRVWDLDKRTPVKQFKRENDRFW 299
Score = 45 (20.9 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 12/46 (26%), Positives = 21/46 (45%)
Query: 499 TISDLPSQLLFIHLGQKEIKELHWHPQLPG--TIISTANSGFNIFR 542
T +LP+QL ++ + E P +PG + N G+ F+
Sbjct: 957 TPCELPAQLGYVRAYDDTVSEDQILPYVPGLDVVNEKMNEGYKNFK 1002
Score = 44 (20.5 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 11/43 (25%), Positives = 20/43 (46%)
Query: 458 DLPSQLLFIHLGQKEIKELHWHPQLPG--TIISTANSGFNIFR 498
+LP+QL ++ + E P +PG + N G+ F+
Sbjct: 960 ELPAQLGYVRAYDDTVSEDQILPYVPGLDVVNEKMNEGYKNFK 1002
>DICTYBASE|DDB_G0278285 [details] [associations]
symbol:copB2 "coatomer protein complex beta 2 subunit
(beta prime)" species:44689 "Dictyostelium discoideum" [GO:0030117
"membrane coat" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=ISS]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0278285 GO:GO:0006886 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GenomeReviews:CM000152_GR GO:GO:0005198 EMBL:AAFI02000023
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030126
HSSP:P63005 InterPro:IPR016453 PIRSF:PIRSF005567 OMA:LRNKAFG
RefSeq:XP_642264.1 ProteinModelPortal:Q54YD8 STRING:Q54YD8
EnsemblProtists:DDB0233798 GeneID:8621473 KEGG:ddi:DDB_G0278285
ProtClustDB:CLSZ2729111 Uniprot:Q54YD8
Length = 1005
Score = 171 (65.3 bits), Expect = 6.8e-09, P = 6.8e-09
Identities = 46/165 (27%), Positives = 79/165 (47%)
Query: 283 TEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDL 342
T P +L++ D I +W E G W Q GH++ V + W+P + A+ S+D
Sbjct: 111 TLPYILSSSD-DMFIKLWD-YEKG-WSNTQV-FEGHSHYVMSIAWNPKDTNQFATASLDK 166
Query: 343 SIRIWDTRVINTKSCMLTLPNAHTSDVNVISW--NRTEPLIVSGGDDGCIHVWDLRRFKK 400
++++W IN+ TL H +N + + +P ++SG DD + +WD ++
Sbjct: 167 TVKVWS---INSPHPHFTL-EGHEKGINSVEYFSGGEKPYLISGADDKLVKIWD---YQS 219
Query: 401 GSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVER 445
+ V T + H+ V+ V +HP E SG D + LW + R
Sbjct: 220 KTCVQTLEGHSNNVSVVCYHP-ELPLILSGSEDGTVKLWHSSTYR 263
Score = 152 (58.6 bits), Expect = 7.6e-07, P = 7.6e-07
Identities = 35/127 (27%), Positives = 65/127 (51%)
Query: 268 FSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQW 327
F GH ++ W+ + AT + + +W+ L GH + +++
Sbjct: 139 FEGHSHYVMSIAWNPKDTNQFATASLDKTVKVWSINSPHP----HFTLEGHEKGINSVEY 194
Query: 328 -SPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGD 386
S GEK L S + D ++IWD + +K+C+ TL H+++V+V+ ++ PLI+SG +
Sbjct: 195 FSGGEKPYLISGADDKLVKIWDYQ---SKTCVQTL-EGHSNNVSVVCYHPELPLILSGSE 250
Query: 387 DGCIHVW 393
DG + +W
Sbjct: 251 DGTVKLW 257
Score = 139 (54.0 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 44/169 (26%), Positives = 80/169 (47%)
Query: 277 AMDWSSTEPGVLATGDCKRNIHIW---TPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKR 333
++D TEP +LA+ N++IW T +++V V + QW
Sbjct: 20 SVDIHPTEPWILASL-YDGNVYIWNYETQNMVKSFEVSPNNPVRTARFIAKKQW------ 72
Query: 334 VLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVW 393
+ + S D IR+++ NT + + AH + I + T P I+S DD I +W
Sbjct: 73 -IVTGSDDTYIRVYN---YNTMEKIKSF-EAHADYIRCIIVHPTLPYILSSSDDMFIKLW 127
Query: 394 DLRRFKKG-SSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDL 441
D ++KG S+ F+ H+ V ++ W+P +++ FA+ D + +W +
Sbjct: 128 D---YEKGWSNTQVFEGHSHYVMSIAWNPKDTNQFATASLDKTVKVWSI 173
>SGD|S000003105 [details] [associations]
symbol:SEC27 "Essential beta'-coat protein of the COPI
coatomer" species:4932 "Saccharomyces cerevisiae" [GO:0000139
"Golgi membrane" evidence=IEA] [GO:0032511 "late endosome to
vacuole transport via multivesicular body sorting pathway"
evidence=IMP;IPI] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IDA]
[GO:0030126 "COPI vesicle coat" evidence=IGI;ISS] [GO:0006888 "ER
to Golgi vesicle-mediated transport" evidence=IMP] [GO:0006890
"retrograde vesicle-mediated transport, Golgi to ER" evidence=IMP]
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0030117 "membrane coat" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000003105 GO:GO:0006886 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:BK006941
GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006888 GO:GO:0030126 GO:GO:0006890 GO:GO:0043130
HOGENOM:HOG000163444 InterPro:IPR016453 PIRSF:PIRSF005567
GeneTree:ENSGT00640000091529 OMA:LRNKAFG OrthoDB:EOG48H0BF
GO:GO:0032511 EMBL:U11237 EMBL:X92670 EMBL:Z72659 PIR:B55123
RefSeq:NP_011378.1 PDB:2YNN PDB:2YNO PDB:2YNP PDBsum:2YNN
PDBsum:2YNO PDBsum:2YNP ProteinModelPortal:P41811 SMR:P41811
DIP:DIP-6468N IntAct:P41811 MINT:MINT-428887 STRING:P41811
PaxDb:P41811 PeptideAtlas:P41811 EnsemblFungi:YGL137W GeneID:852740
KEGG:sce:YGL137W CYGD:YGL137w NextBio:972153 Genevestigator:P41811
GermOnline:YGL137W Uniprot:P41811
Length = 889
Score = 170 (64.9 bits), Expect = 7.4e-09, P = 7.4e-09
Identities = 48/178 (26%), Positives = 85/178 (47%)
Query: 267 SFSGHLTEGFAM--DWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVED 324
+F GH E F M ++ +P A+G R + +W+ G + G V
Sbjct: 135 TFEGH--EHFVMCVAFNPKDPSTFASGCLDRTVKVWS---LGQSTPNFTLTTGQERGVNY 189
Query: 325 LQWSP-GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVS 383
+ + P +K + + S DL+I+IWD + TKSC+ TL H S+V+ ++ T P+I+S
Sbjct: 190 VDYYPLPDKPYMITASDDLTIKIWDYQ---TKSCVATL-EGHMSNVSFAVFHPTLPIIIS 245
Query: 384 GGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDL 441
G +DG + +W+ +K ++ + + T HPT + + G D+ + L
Sbjct: 246 GSEDGTLKIWNSSTYKVEKTLNVGLERSWCIAT---HPTGRKNYIASGFDNGFTVLSL 300
Score = 130 (50.8 bits), Expect = 0.00015, P = 0.00015
Identities = 49/178 (27%), Positives = 80/178 (44%)
Query: 267 SFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIW---TPREAGAWQVDQKPLVGHTNSVE 323
+FS +D+ TEP VL T R + +W T E + QV + P V +
Sbjct: 8 TFSNRSDRVKGIDFHPTEPWVLTTLYSGR-VELWNYETQVEVRSIQVTETP-VRAGKFIA 65
Query: 324 DLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVS 383
W ++ S D IR+++ NT ++ AH + I+ + T+P ++S
Sbjct: 66 RKNW------IIVG-SDDFRIRVFN---YNTGEKVVDF-EAHPDYIRSIAVHPTKPYVLS 114
Query: 384 GGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDL 441
G DD + +W+ + TF+ H V V ++P + STFASG D + +W L
Sbjct: 115 GSDDLTVKLWNWEN--NWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSL 170
>TAIR|locus:2158232 [details] [associations]
symbol:HOS15 "high expression of osmotically responsive
genes 15" species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0009409 "response to cold" evidence=IMP]
[GO:0016575 "histone deacetylation" evidence=IMP] [GO:0000956
"nuclear-transcribed mRNA catabolic process" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0016571 "histone methylation" evidence=RCA]
[GO:0016572 "histone phosphorylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005634
EMBL:CP002688 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0009409 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 EMBL:AB007645 GO:GO:0016575
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000220902 OMA:LANNHAD
EMBL:AY057698 EMBL:AY143932 IPI:IPI00531489 RefSeq:NP_201533.1
UniGene:At.6493 ProteinModelPortal:Q9FN19 SMR:Q9FN19 STRING:Q9FN19
PRIDE:Q9FN19 EnsemblPlants:AT5G67320.1 GeneID:836867
KEGG:ath:AT5G67320 TAIR:At5g67320 InParanoid:Q9FN19
PhylomeDB:Q9FN19 ProtClustDB:CLSN2687044 Genevestigator:Q9FN19
Uniprot:Q9FN19
Length = 613
Score = 164 (62.8 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 67/279 (24%), Positives = 119/279 (42%)
Query: 171 SFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQ 230
+ S H F++ W+ + L TG R +W + A W+ + H+ D+
Sbjct: 360 TLSKHKGPIFSLKWNK-KGDYLLTGSVDRTAVVWDVK-AEEWK---QQFEFHSGPTLDVD 414
Query: 231 W-SDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLA 289
W +++ A + D L K G+ T P +F+GH E + W T +LA
Sbjct: 415 WRNNVSFATSSTDSMIYLC----KIGE-----TRPAKTFTGHQGEVNCVKWDPTG-SLLA 464
Query: 290 TGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSP--------GEKRVLASCSVD 341
+ IW +++ + D + HT + ++WSP ++ LAS S D
Sbjct: 465 SCSDDSTAKIWNIKQS-TFVHDLRE---HTKEIYTIRWSPTGPGTNNPNKQLTLASASFD 520
Query: 342 LSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKG 401
++++WD + ML N H V ++++ I SG D IH+W + K+G
Sbjct: 521 STVKLWDAEL----GKMLCSFNGHREPVYSLAFSPNGEYIASGSLDKSIHIWSI---KEG 573
Query: 402 SSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWD 440
V T+ + + V W+ E + A+ AD+ + + D
Sbjct: 574 KIVKTYTGNGG-IFEVCWNK-EGNKIAACFADNSVCVLD 610
Score = 150 (57.9 bits), Expect = 7.8e-09, Sum P(2) = 7.8e-09
Identities = 70/294 (23%), Positives = 111/294 (37%)
Query: 164 IPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQ-KPLGG- 221
IP + GH +E A WS + +LA+G IW+ E V + +
Sbjct: 253 IPNSDVRILEGHTSEVCACAWSPSA-SLLASGSGDATARIWSIPEGSFKAVHTGRNINAL 311
Query: 222 ---HTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFS-FSGHLTEGFA 277
H + + D+ T L + LA + L S S H F+
Sbjct: 312 ILKHAKGKSNEKSKDV-TTLDWNGEGTLLATGSCDGQARIWTLNGELISTLSKHKGPIFS 370
Query: 278 MDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLAS 337
+ W+ + L TG R +W + A W+ + H+ D+ W A+
Sbjct: 371 LKWNK-KGDYLLTGSVDRTAVVWDVK-AEEWK---QQFEFHSGPTLDVDWRNNVS--FAT 423
Query: 338 CSVDLSI---RIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWD 394
S D I +I +TR T + H +VN + W+ T L+ S DD +W+
Sbjct: 424 SSTDSMIYLCKIGETRPAKTFT-------GHQGEVNCVKWDPTGSLLASCSDDSTAKIWN 476
Query: 395 LRRFKKGSSVATFKHHTAPVTTVEWHPT--------ESSTFASGGADDQIALWD 440
+ K+ + V + HT + T+ W PT + T AS D + LWD
Sbjct: 477 I---KQSTFVHDLREHTKEIYTIRWSPTGPGTNNPNKQLTLASASFDSTVKLWD 527
Score = 135 (52.6 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 37/138 (26%), Positives = 60/138 (43%)
Query: 313 KPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVI 372
K GH V ++W P +LASCS D + +IW+ + +S + HT ++ I
Sbjct: 442 KTFTGHQGEVNCVKWDPTGS-LLASCSDDSTAKIWNIK----QSTFVHDLREHTKEIYTI 496
Query: 373 SWNRTEP---------LIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTE 423
W+ T P + S D + +WD + G + +F H PV ++ + P
Sbjct: 497 RWSPTGPGTNNPNKQLTLASASFDSTVKLWDA---ELGKMLCSFNGHREPVYSLAFSPN- 552
Query: 424 SSTFASGGADDQIALWDL 441
ASG D I +W +
Sbjct: 553 GEYIASGSLDKSIHIWSI 570
Score = 96 (38.9 bits), Expect = 0.00057, Sum P(3) = 0.00057
Identities = 29/109 (26%), Positives = 49/109 (44%)
Query: 365 HTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRR--FKK---GSSVATF--KH-------H 410
HTS+V +W+ + L+ SG D +W + FK G ++ KH
Sbjct: 264 HTSEVCACAWSPSASLLASGSGDATARIWSIPEGSFKAVHTGRNINALILKHAKGKSNEK 323
Query: 411 TAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDL 459
+ VTT++W+ E + A+G D Q +W L E S + + + + L
Sbjct: 324 SKDVTTLDWNG-EGTLLATGSCDGQARIWTLNGELISTLSKHKGPIFSL 371
Score = 66 (28.3 bits), Expect = 7.8e-09, Sum P(2) = 7.8e-09
Identities = 17/55 (30%), Positives = 29/55 (52%)
Query: 649 LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSVYLYTNRFGV 703
L SF+GH +++ +S +A+G ++IHIW+ +E V YT G+
Sbjct: 534 LCSFNGHREPVYSLAFSPNGE-YIASGSLDKSIHIWSIKEGKI--VKTYTGNGGI 585
Score = 51 (23.0 bits), Expect = 0.00057, Sum P(3) = 0.00057
Identities = 18/63 (28%), Positives = 31/63 (49%)
Query: 470 QKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIH-LGQ--KEIKELHWHPQL 526
Q E+ + W P G+++++ + I ++ Q F+H L + KEI + W P
Sbjct: 448 QGEVNCVKWDPT--GSLLASCSDDSTA--KIWNI-KQSTFVHDLREHTKEIYTIRWSPTG 502
Query: 527 PGT 529
PGT
Sbjct: 503 PGT 505
>POMBASE|SPAC806.02c [details] [associations]
symbol:SPAC806.02c "Par A family ATPase/WD repeat iron
cluster assembly fusion protein (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0005524 "ATP binding" evidence=ISO]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0016226
"iron-sulfur cluster assembly" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0043234 "protein complex" evidence=NAS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051539 "4 iron,
4 sulfur cluster binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR000808 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS01215 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC806.02c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0043234 EMBL:CU329670 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
eggNOG:COG2319 GO:GO:0016887 GO:GO:0051539 GO:GO:0016226
InterPro:IPR019591 Pfam:PF10609 PIR:T39094 RefSeq:NP_592852.1
ProteinModelPortal:Q9UT57 EnsemblFungi:SPAC806.02c.1 GeneID:2542122
KEGG:spo:SPAC806.02c OrthoDB:EOG4XKZGD NextBio:20803194
Uniprot:Q9UT57
Length = 608
Score = 159 (61.0 bits), Expect = 8.8e-09, Sum P(2) = 8.8e-09
Identities = 35/122 (28%), Positives = 56/122 (45%)
Query: 318 HTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRT 377
HT S+ + W P E+ VLA S D + I + ++ + C L H ++V I+W+
Sbjct: 332 HTRSIRRVAWRPIERPVLAVASFDSVVSI-NEKIDDDWECTAAL-EGHENEVKCIAWSCN 389
Query: 378 EPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIA 437
+ + D + +W+ + +A + HT V V WHPTE SG D+ I
Sbjct: 390 GNYLATCSRDKSVWIWEATEDDEFDCLAVLQEHTQDVKVVTWHPTED-LLVSGSYDNSIC 448
Query: 438 LW 439
W
Sbjct: 449 FW 450
Score = 56 (24.8 bits), Expect = 8.8e-09, Sum P(2) = 8.8e-09
Identities = 20/56 (35%), Positives = 28/56 (50%)
Query: 703 VLATGDCKRNIHIWTPREAGA-WQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVD 757
+L +G +I W R+ G W + + L GHTN+V L +SP LAS D
Sbjct: 437 LLVSGSYDNSICFW--RDDGDDWALTCQ-LQGHTNTVWALAFSPNGN-TLASADND 488
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 165 (63.1 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 54/175 (30%), Positives = 85/175 (48%)
Query: 268 FSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWT--PREAGAWQVDQKPLVGHTNSVEDL 325
F GH D++ LATG C +++ IW P+ A A++ VGHT+ + +
Sbjct: 14 FKGHKDVISCADFNPNNKQ-LATGSCDKSLMIWNLAPK-ARAFR-----FVGHTDVITGV 66
Query: 326 QWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGG 385
++P V AS S D ++R+W T I +S T+ AHT+ V + ++R +V+
Sbjct: 67 NFAPSGSLV-ASSSRDQTVRLW-TPSIKGES---TVFKAHTASVRSVHFSRDGQRLVTAS 121
Query: 386 DDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWD 440
DD + VW + R KK + + HT V + P + AS G D + LWD
Sbjct: 122 DDKSVKVWGVER-KK--FLYSLNRHTNWVRCARFSP-DGRLIASCGDDRTVRLWD 172
Score = 160 (61.4 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 43/154 (27%), Positives = 74/154 (48%)
Query: 292 DCKRNIHIWTPREAGAWQVDQKPLV----GHTNSVEDLQWSPGEKRVLASCSVDLSIRIW 347
D +R + + W V++K + HTN V ++SP + R++ASC D ++R+W
Sbjct: 113 DGQRLVTASDDKSVKVWGVERKKFLYSLNRHTNWVRCARFSP-DGRLIASCGDDRTVRLW 171
Query: 348 DTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATF 407
DT ++ C + + + + +N + I S G D I +WD+R K + +
Sbjct: 172 DT---SSHQC-INIFTDYGGSATFVDFNSSGTCIASSGADNTIKIWDIRTNKL---IQHY 224
Query: 408 KHHTAPVTTVEWHPTESSTFASGGADDQIALWDL 441
K H A V +HP+ + SG +D I + DL
Sbjct: 225 KVHNAGVNCFSFHPS-GNYLISGSSDSTIKILDL 257
Score = 155 (59.6 bits), Expect = 7.9e-08, Sum P(2) = 7.9e-08
Identities = 47/185 (25%), Positives = 86/185 (46%)
Query: 261 PTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTN 320
P F F GH ++++ + ++A+ + + +WTP G V + HT
Sbjct: 49 PKARAFRFVGHTDVITGVNFAPSG-SLVASSSRDQTVRLWTPSIKGESTVFK----AHTA 103
Query: 321 SVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPL 380
SV + +S +R L + S D S+++W + K + +L N HT+ V ++ L
Sbjct: 104 SVRSVHFSRDGQR-LVTASDDKSVKVWG---VERKKFLYSL-NRHTNWVRCARFSPDGRL 158
Query: 381 IVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWD 440
I S GDD + +WD + + F + T V+++ + + AS GAD+ I +WD
Sbjct: 159 IASCGDDRTVRLWDTSSHQ---CINIFTDYGGSATFVDFN-SSGTCIASSGADNTIKIWD 214
Query: 441 LAVER 445
+ +
Sbjct: 215 IRTNK 219
Score = 139 (54.0 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 35/105 (33%), Positives = 53/105 (50%)
Query: 335 LASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWD 394
+AS D +I+IWD R N ++ H + VN S++ + ++SG D I + D
Sbjct: 201 IASSGADNTIKIWDIRT-NK---LIQHYKVHNAGVNCFSFHPSGNYLISGSSDSTIKILD 256
Query: 395 LRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALW 439
L +G + T H PV TV + + FASGGAD Q+ +W
Sbjct: 257 LL---EGRLIYTLHGHKGPVLTVTFS-RDGDLFASGGADSQVLMW 297
Score = 48 (22.0 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 172 FSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIW 204
F GH D++ LATG C +++ IW
Sbjct: 14 FKGHKDVISCADFNPNNKQ-LATGSCDKSLMIW 45
>WB|WBGene00013143 [details] [associations]
symbol:Y53C12B.1 species:6239 "Caenorhabditis elegans"
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0007126 "meiosis"
evidence=IMP] [GO:0045132 "meiotic chromosome segregation"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0009792
GO:GO:0006898 GO:GO:0040010 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045132 GO:GO:0006364
HSSP:P16649 GO:GO:0032040 EMBL:Z99278 KO:K14555 OMA:HHFRGSP
GeneTree:ENSGT00690000102183 PIR:T27133 RefSeq:NP_496100.1
UniGene:Cel.13957 ProteinModelPortal:O18215 SMR:O18215
STRING:O18215 PaxDb:O18215 EnsemblMetazoa:Y53C12B.1 GeneID:190203
KEGG:cel:CELE_Y53C12B.1 UCSC:Y53C12B.1 CTD:190203
WormBase:Y53C12B.1 HOGENOM:HOG000016188 InParanoid:O18215
NextBio:944956 Uniprot:O18215
Length = 793
Score = 168 (64.2 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 51/196 (26%), Positives = 92/196 (46%)
Query: 282 STEPGVLATGDCKRNIHIWTPREAGAWQVD-QKPLVGHTNSVEDLQWSPGEKRVLASCSV 340
S ++ATG + + +W + Q+ L GH V D++++ + LASCS
Sbjct: 486 SESDALIATGGMDKLVKLWQV-DTHKMQLGIAGTLSGHRRGVGDVKFAKNSHK-LASCSG 543
Query: 341 DLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKK 400
D++I+IW+ I+ KSC+ T+ + H+ V + + R + ++S G I +W + K
Sbjct: 544 DMTIKIWN---ISEKSCLQTI-SGHSCAVFRVIFARNDSQLISADSAGIIKIWTI---KT 596
Query: 401 GSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALW-DLAVERDSEIEQREAELKDL 459
+ HT + ++ + ES F + G D +I +W D+ E+ + + E +
Sbjct: 597 ADCECSIDAHTDKIWSLSKNHNESE-FVTAGTDGRIVVWKDVTEEKQKAEDNKRREAIE- 654
Query: 460 PSQLLFIHLGQKEIKE 475
Q L L QK E
Sbjct: 655 QDQTLTNLLSQKRYSE 670
>UNIPROTKB|O60907 [details] [associations]
symbol:TBL1X "F-box-like/WD repeat-containing protein
TBL1X" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=IMP] [GO:0003714 "transcription
corepressor activity" evidence=IGI;IDA] [GO:0042393 "histone
binding" evidence=IDA] [GO:0017053 "transcriptional repressor
complex" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0008022 "protein
C-terminus binding" evidence=IPI] [GO:0005876 "spindle microtubule"
evidence=IDA] [GO:0000118 "histone deacetylase complex"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0007605 "sensory
perception of sound" evidence=IMP] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0008013 "beta-catenin binding"
evidence=IPI] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0007219 "Notch signaling pathway" evidence=TAS] [GO:0044255
"cellular lipid metabolic process" evidence=TAS] [GO:0044281 "small
molecule metabolic process" evidence=TAS] Reactome:REACT_111217
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Reactome:REACT_111102
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0044281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0007219 GO:GO:0044255 GO:GO:0006351 GO:GO:0000122
GO:GO:0044212 GO:GO:0007605 InterPro:IPR013720 Pfam:PF08513
GO:GO:0042393 GO:GO:0060070 GO:GO:0005876 KO:K04508 EMBL:AC003036
HOGENOM:HOG000220902 HOVERGEN:HBG050240 OrthoDB:EOG412M5M
EMBL:Y12781 EMBL:AK289409 EMBL:AK290962 EMBL:BC032708 EMBL:BC052304
IPI:IPI00218132 IPI:IPI00640917 RefSeq:NP_001132938.1
RefSeq:NP_001132939.1 RefSeq:NP_001132940.1 RefSeq:NP_005638.1
UniGene:Hs.495656 PDB:2XTC PDB:2XTD PDB:2XTE PDBsum:2XTC
PDBsum:2XTD PDBsum:2XTE ProteinModelPortal:O60907 SMR:O60907
IntAct:O60907 STRING:O60907 PhosphoSite:O60907 PaxDb:O60907
PRIDE:O60907 Ensembl:ENST00000217964 Ensembl:ENST00000380961
Ensembl:ENST00000407597 Ensembl:ENST00000424279
Ensembl:ENST00000536365 GeneID:6907 KEGG:hsa:6907 UCSC:uc004csq.4
CTD:6907 GeneCards:GC0XP009431 HGNC:HGNC:11585 HPA:CAB005363
MIM:300196 neXtProt:NX_O60907 PharmGKB:PA36349 InParanoid:O60907
OMA:RAHSVNN PhylomeDB:O60907 ChiTaRS:TBL1X EvolutionaryTrace:O60907
GenomeRNAi:6907 NextBio:27011 ArrayExpress:O60907 Bgee:O60907
CleanEx:HS_TBL1X Genevestigator:O60907 GermOnline:ENSG00000101849
Uniprot:O60907
Length = 577
Score = 166 (63.5 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 68/272 (25%), Positives = 113/272 (41%)
Query: 180 FAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQ 239
FA+ W+ +L+ G K I IW A Q Q P H+ A D+ W + T
Sbjct: 333 FALKWNRKGNYILSAGVDKTTI-IWDAHTGEAKQ--QFPF--HSAPALDVDWQNNTTFAS 387
Query: 240 TVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRN--I 297
D + H + G P+ +F GH E A+ W +P + C + +
Sbjct: 388 CSTD---MCIHVCRLGCDR-----PVKTFQGHTNEVNAIKW---DPSGMLLASCSDDMTL 436
Query: 298 HIWTPREAGAWQVDQKPLVGHTNSVEDLQWSP--------GEKRVLASCSVDLSIRIWDT 349
IW+ ++ +V L H + ++WSP +LAS S D ++R+WD
Sbjct: 437 KIWSMKQ----EVCIHDLQAHNKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWD- 491
Query: 350 RVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKH 409
I C TL H V ++++ + SG D C+H+W+ + G+ V +++
Sbjct: 492 --IERGVCTHTLTK-HQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQ---SGNLVHSYRG 545
Query: 410 HTAPVTTVEWHPTESSTFASGGADDQIALWDL 441
T + V W+ AS +D + + DL
Sbjct: 546 -TGGIFEVCWNARGDKVGASA-SDGSVCVLDL 575
Score = 160 (61.4 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 75/293 (25%), Positives = 115/293 (39%)
Query: 164 IPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPRE---AGAWQVDQKPL- 219
IP+ GH +E F W+ +LA+G IW E G+ Q+ +
Sbjct: 220 IPSSKATVLRGHESEVFICAWNPVSD-LLASGSGDSTARIWNLNENSNGGSTQLVLRHCI 278
Query: 220 --GGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSG-HLTEGF 276
GGH D+ + T+L + LA + L S G H F
Sbjct: 279 REGGH-----DVPSNKDVTSLDWNTNGTLLATGSYDGFARIWTEDGNLASTLGQHKGPIF 333
Query: 277 AMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLA 336
A+ W+ +L+ G K I IW A Q Q P H+ D+ W A
Sbjct: 334 ALKWNRKGNYILSAGVDKTTI-IWDAHTGEAKQ--QFPF--HSAPALDVDWQ--NNTTFA 386
Query: 337 SCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLR 396
SCS D+ I + R + + T HT++VN I W+ + L+ S DD + +W +
Sbjct: 387 SCSTDMCIHV--CR-LGCDRPVKTF-QGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSM- 441
Query: 397 RFKKGSSVATFKHHTAPVTTVEWHPTESST--------FASGGADDQIALWDL 441
K+ + + H + T++W PT +T AS D + LWD+
Sbjct: 442 --KQEVCIHDLQAHNKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDI 492
Score = 104 (41.7 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 26/99 (26%), Positives = 42/99 (42%)
Query: 352 INTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVA-TFKH- 409
+ S T+ H S+V + +WN L+ SG D +W+L G S +H
Sbjct: 218 VEIPSSKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHC 277
Query: 410 -----HTAP----VTTVEWHPTESSTFASGGADDQIALW 439
H P VT+++W+ T + A+G D +W
Sbjct: 278 IREGGHDVPSNKDVTSLDWN-TNGTLLATGSYDGFARIW 315
Score = 70 (29.7 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 15/34 (44%), Positives = 20/34 (58%)
Query: 729 KPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRI 762
K GHTN V ++W P +LASCS D + +I
Sbjct: 406 KTFQGHTNEVNAIKWDPSGM-LLASCSDDMTLKI 438
>FB|FBgn0263933 [details] [associations]
symbol:ebi "ebi" species:7227 "Drosophila melanogaster"
[GO:0042058 "regulation of epidermal growth factor receptor
signaling pathway" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005525 "GTP binding" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0051726 "regulation of cell
cycle" evidence=IMP] [GO:0007173 "epidermal growth factor receptor
signaling pathway" evidence=TAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0042676 "compound eye cone cell fate
commitment" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0017053 "transcriptional repressor complex"
evidence=IGI;IPI] [GO:0042461 "photoreceptor cell development"
evidence=IMP] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0031065 "positive regulation of histone deacetylation"
evidence=IDA] [GO:0070491 "repressing transcription factor binding"
evidence=IPI] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=IPI] [GO:0035220 "wing disc
development" evidence=IGI;IMP] [GO:0045747 "positive regulation of
Notch signaling pathway" evidence=IGI;IDA] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0045572 "positive regulation of
imaginal disc growth" evidence=IGI;IMP] [GO:0022416 "chaeta
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005525 GO:GO:0017053 GO:GO:0007173 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0007601 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030162 GO:GO:0007219 GO:GO:0045747
GO:GO:0003682 GO:GO:0000122 GO:GO:0022416 GO:GO:0035220
GO:GO:0007049 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045572
GO:GO:0005700 GO:GO:0042461 GO:GO:0042058 GO:GO:0031065
GO:GO:0042676 EMBL:AF146345 EMBL:AY061326 RefSeq:NP_477329.1
UniGene:Dm.3639 ProteinModelPortal:Q95RJ9 SMR:Q95RJ9 IntAct:Q95RJ9
MINT:MINT-6540401 STRING:Q95RJ9 PaxDb:Q95RJ9
EnsemblMetazoa:FBtr0078055 GeneID:33212 KEGG:dme:Dmel_CG4063
CTD:33212 FlyBase:FBgn0263933 GeneTree:ENSGT00690000102024
InParanoid:Q95RJ9 KO:K04508 OMA:NRDRCCH OrthoDB:EOG4SF7NC
PhylomeDB:Q95RJ9 GenomeRNAi:33212 NextBio:782461 Bgee:Q95RJ9
GermOnline:CG4063 Uniprot:Q95RJ9
Length = 700
Score = 167 (63.8 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 69/270 (25%), Positives = 115/270 (42%)
Query: 180 FAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQ 239
FA+ W+ +L+ G K I IW +A Q Q+ H+ A D+ W A
Sbjct: 455 FALKWNKCGNYILSAGVDKTTI-IW---DASTGQCTQQ-FAFHSAPALDVDWQT-NQAFA 508
Query: 240 TVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHI 299
+ ++ H + G P+ +F GH E A+ W + +LA+ + I
Sbjct: 509 SCSTDQRI--HVCRLGVNE-----PIKTFKGHTNEVNAIKWCP-QGQLLASCSDDMTLKI 560
Query: 300 WTPREAGAWQVDQKPLVGHTNSVEDLQWSP---GEKR-----VLASCSVDLSIRIWDTRV 351
W+ D L H+ + ++WSP G +LAS S D ++R+WD
Sbjct: 561 WSMNRDRCCH-D---LQAHSKEIYTIKWSPTGPGTNNPNTNLILASASFDSTVRLWD--- 613
Query: 352 INTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHT 411
+ SC+ TL HT V ++++ + SG D C+H+W + G V ++K T
Sbjct: 614 VERGSCIHTLTK-HTEPVYSVAFSPDGKHLASGSFDKCVHIWSTQT---GQLVHSYKG-T 668
Query: 412 APVTTVEWHPTESSTFASGGADDQIALWDL 441
+ V W+ + AS +D + + DL
Sbjct: 669 GGIFEVCWNSKGTKVGASA-SDGSVFVLDL 697
Score = 152 (58.6 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 51/180 (28%), Positives = 76/180 (42%)
Query: 276 FAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVL 335
FA+ W+ +L+ G K I IW +A Q Q+ H+ D+ W +
Sbjct: 455 FALKWNKCGNYILSAGVDKTTI-IW---DASTGQCTQQ-FAFHSAPALDVDWQTNQ--AF 507
Query: 336 ASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDL 395
ASCS D I + R + + T HT++VN I W L+ S DD + +W +
Sbjct: 508 ASCSTDQRIHV--CR-LGVNEPIKTF-KGHTNEVNAIKWCPQGQLLASCSDDMTLKIWSM 563
Query: 396 RRFKKGSSVATFKHHTAPVTTVEWHPTESST--------FASGGADDQIALWDLAVERDS 447
R + + H+ + T++W PT T AS D + LWD VER S
Sbjct: 564 NRDR---CCHDLQAHSKEIYTIKWSPTGPGTNNPNTNLILASASFDSTVRLWD--VERGS 618
Score = 133 (51.9 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 54/235 (22%), Positives = 85/235 (36%)
Query: 172 FSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQW 231
F+ H +DW + + A+ + IH+ G + K GHTN ++W
Sbjct: 489 FAFHSAPALDVDWQTNQ--AFASCSTDQRIHVC---RLGVNE-PIKTFKGHTNEVNAIKW 542
Query: 232 SDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPG----- 286
L + D L + R + H E + + WS T PG
Sbjct: 543 CPQGQLLASCSDDMTLKIWSMNRDRC-------CHDLQAHSKEIYTIKWSPTGPGTNNPN 595
Query: 287 ---VLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLS 343
+LA+ + +W L HT V + +SP K LAS S D
Sbjct: 596 TNLILASASFDSTVRLWDVERGSCIHT----LTKHTEPVYSVAFSPDGKH-LASGSFDKC 650
Query: 344 IRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRF 398
+ IW +T++ L T + + WN + + DG + V DLR+F
Sbjct: 651 VHIW-----STQTGQLVHSYKGTGGIFEVCWNSKGTKVGASASDGSVFVLDLRKF 700
Score = 126 (49.4 bits), Expect = 6.4e-07, Sum P(2) = 6.4e-07
Identities = 50/194 (25%), Positives = 74/194 (38%)
Query: 260 IPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPL---- 315
IP GH +E F W+ + +LA+G IW +A +Q L
Sbjct: 343 IPESKARVLRGHESEVFICAWNPSRD-LLASGSGDSTARIWDMSDANT-NSNQLVLRHCI 400
Query: 316 ------VGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDV 369
V V L W+ + +LA+ S D RIW T + + H +
Sbjct: 401 QKGGAEVPSNKDVTSLDWNC-DGSLLATGSYDGYARIW-----KTDGRLASTLGQHKGPI 454
Query: 370 NVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFAS 429
+ WN+ I+S G D +WD G F H+AP V+W ++ FAS
Sbjct: 455 FALKWNKCGNYILSAGVDKTTIIWDA---STGQCTQQFAFHSAPALDVDWQTNQA--FAS 509
Query: 430 GGADDQIALWDLAV 443
D +I + L V
Sbjct: 510 CSTDQRIHVCRLGV 523
Score = 74 (31.1 bits), Expect = 6.4e-07, Sum P(2) = 6.4e-07
Identities = 17/40 (42%), Positives = 25/40 (62%)
Query: 729 KPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRIGA-RRD 767
K GHTN V ++W P + ++LASCS D + +I + RD
Sbjct: 528 KTFKGHTNEVNAIKWCP-QGQLLASCSDDMTLKIWSMNRD 566
Score = 60 (26.2 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 31/126 (24%), Positives = 51/126 (40%)
Query: 648 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPR------EAGAWSVYLYTNRF 701
P+ +F GH E A+ W + +LA+ + IW+ + A S +YT ++
Sbjct: 526 PIKTFKGHTNEVNAIKWCP-QGQLLASCSDDMTLKIWSMNRDRCCHDLQAHSKEIYTIKW 584
Query: 702 GVLATGDCKRNIHIWTPREA-----GAWQVDQ----KPLVGHTNSVEDLQWSPGEKRVLA 752
G N ++ + W V++ L HT V + +SP K LA
Sbjct: 585 SPTGPGTNNPNTNLILASASFDSTVRLWDVERGSCIHTLTKHTEPVYSVAFSPDGKH-LA 643
Query: 753 SCSVDR 758
S S D+
Sbjct: 644 SGSFDK 649
Score = 51 (23.0 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 17/60 (28%), Positives = 26/60 (43%)
Query: 472 EIKELHWHPQLPGTIISTANSGFN--IFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGT 529
E+ + W PQ G ++++ + I+ D L H KEI + W P PGT
Sbjct: 536 EVNAIKWCPQ--GQLLASCSDDMTLKIWSMNRDRCCHDLQAH--SKEIYTIKWSPTGPGT 591
Score = 45 (20.9 bits), Expect = 0.00058, Sum P(2) = 0.00058
Identities = 41/174 (23%), Positives = 68/174 (39%)
Query: 583 FIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGP 642
F H +N ++ C G LA ++ + IW + D L H+K+
Sbjct: 530 FKGHTNEVNAIKWCPQGQL-LASCSDDM-TLKIWSMNRDRCCHD----LQAHSKEIYTIK 583
Query: 643 GIPTPP-LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSVYLYTNRF 701
PT P + + +L A S+ + G C IH T +SV ++
Sbjct: 584 WSPTGPGTNNPNTNLILASASFDSTVRLWDVERGSC---IHTLTKHTEPVYSV-AFSPDG 639
Query: 702 GVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCS 755
LA+G + +HIW+ + G K G T + ++ W+ +V AS S
Sbjct: 640 KHLASGSFDKCVHIWST-QTGQLVHSYK---G-TGGIFEVCWNSKGTKVGASAS 688
>UNIPROTKB|F1NYZ8 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0008013 "beta-catenin
binding" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0044212 "transcription regulatory region
DNA binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0047485 "protein N-terminus binding" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 InterPro:IPR011047 SUPFAM:SSF50998
InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070 GO:GO:0005876
GO:GO:0000118 GeneTree:ENSGT00690000102024 EMBL:AADN02020878
EMBL:AADN02020879 EMBL:AADN02020880 EMBL:AADN02020881
EMBL:AADN02020882 EMBL:AADN02020883 EMBL:AADN02020884
EMBL:AADN02020885 EMBL:AADN02020886 EMBL:AADN02020887
EMBL:AADN02020888 EMBL:AADN02020889 EMBL:AADN02020890
EMBL:AADN02020891 EMBL:AADN02020892 EMBL:AADN02020893
EMBL:AADN02020894 EMBL:AADN02020895 EMBL:AADN02020896
EMBL:AADN02020897 EMBL:AADN02020898 IPI:IPI00594570
Ensembl:ENSGALT00000001912 ArrayExpress:F1NYZ8 Uniprot:F1NYZ8
Length = 517
Score = 165 (63.1 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 69/273 (25%), Positives = 114/273 (41%)
Query: 180 FAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQ 239
FA+ W+ +L+ G K I IW A Q Q P H+ A D+ W T
Sbjct: 270 FALKWNKKGNFILSAGVDKTTI-IWDAHTGEAKQ--QFPF--HSAPALDVDWQSNNTFAS 324
Query: 240 TVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHI 299
D + H K G+ P+ +F GH E A+ W T +LA+ + I
Sbjct: 325 CSTD---MCIHVCKLGQDR-----PIKTFQGHTNEVNAIKWDPTG-NLLASCSDDMTLKI 375
Query: 300 WTPREAGAWQVDQKPLVGHTNSVEDLQWSP---GEKR-----VLAS---CSVDLSIRIWD 348
W+ ++ L H + ++WSP G +LAS S D ++R+WD
Sbjct: 376 WSMKQDSCVH----DLQAHNKEIYTIKWSPTGPGTNNPNANLMLASLDSASFDSTVRLWD 431
Query: 349 TRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFK 408
++ C+ TL H V ++++ + SG D C+H+W+ + G+ V +++
Sbjct: 432 ---VDRGICIHTLTK-HQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQT---GALVHSYR 484
Query: 409 HHTAPVTTVEWHPTESSTFASGGADDQIALWDL 441
T + V W+ AS +D + + DL
Sbjct: 485 G-TGGIFEVCWNAAGDKVGASA-SDGSVCVLDL 515
Score = 159 (61.0 bits), Expect = 7.1e-08, Sum P(2) = 7.1e-08
Identities = 69/266 (25%), Positives = 101/266 (37%)
Query: 164 IPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHT 223
IP GH +E F W+ +LA+G IW E Q L H
Sbjct: 157 IPPNKAVVLRGHESEVFICAWNPVSD-LLASGSGDSTARIWNLSENSTSGSTQLVLR-HC 214
Query: 224 --NSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSG-HLTEGFAMDW 280
+D+ + T+L + LA + L S G H FA+ W
Sbjct: 215 IREGGQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIWTKDGNLASTLGQHKGPIFALKW 274
Query: 281 SSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSV 340
+ +L+ G K I IW A Q Q P H+ D+ W ASCS
Sbjct: 275 NKKGNFILSAGVDKTTI-IWDAHTGEAKQ--QFPF--HSAPALDVDWQ--SNNTFASCST 327
Query: 341 DLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKK 400
D+ I + + + T HT++VN I W+ T L+ S DD + +W + K+
Sbjct: 328 DMCIHVCK---LGQDRPIKTF-QGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSM---KQ 380
Query: 401 GSSVATFKHHTAPVTTVEWHPTESST 426
S V + H + T++W PT T
Sbjct: 381 DSCVHDLQAHNKEIYTIKWSPTGPGT 406
Score = 128 (50.1 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 38/136 (27%), Positives = 58/136 (42%)
Query: 315 LVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTK-SCMLTLPNA--------- 364
L GH + V W+P +LAS S D + RIW+ +T S L L +
Sbjct: 165 LRGHESEVFICAWNPVSD-LLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVP 223
Query: 365 HTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTES 424
DV + WN L+ +G DG +W K G+ +T H P+ ++W+ +
Sbjct: 224 SNKDVTSLDWNSEGTLLATGSYDGFARIWT----KDGNLASTLGQHKGPIFALKWNK-KG 278
Query: 425 STFASGGADDQIALWD 440
+ S G D +WD
Sbjct: 279 NFILSAGVDKTTIIWD 294
Score = 122 (48.0 bits), Expect = 0.00054, P = 0.00054
Identities = 58/237 (24%), Positives = 88/237 (37%)
Query: 172 FSGHLTEGFAMDWSSTEPGVLATGD-CKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQ 230
F H +DW S + D C IH+ + G + K GHTN ++
Sbjct: 304 FPFHSAPALDVDWQSNNTFASCSTDMC---IHVC---KLGQDR-PIKTFQGHTNEVNAIK 356
Query: 231 WSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLAT 290
W L + D L + K+ + H E + + WS T PG T
Sbjct: 357 WDPTGNLLASCSDDMTLKIWSMKQDSC-------VHDLQAHNKEIYTIKWSPTGPG---T 406
Query: 291 GDCKRNIHIWTPREAG------AWQVDQ----KPLVGHTNSVEDLQWSPGEKRVLASCSV 340
+ N+ + + A W VD+ L H V + +SP + R LAS S
Sbjct: 407 NNPNANLMLASLDSASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSP-DGRYLASGSF 465
Query: 341 DLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRR 397
D + IW NT++ L T + + WN + + DG + V DLR+
Sbjct: 466 DKCVHIW-----NTQTGALVHSYRGTGGIFEVCWNAAGDKVGASASDGSVCVLDLRK 517
Score = 70 (29.7 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 15/34 (44%), Positives = 20/34 (58%)
Query: 729 KPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRI 762
K GHTN V ++W P +LASCS D + +I
Sbjct: 343 KTFQGHTNEVNAIKWDP-TGNLLASCSDDMTLKI 375
Score = 56 (24.8 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 44/177 (24%), Positives = 69/177 (38%)
Query: 587 RGCINRVRTCQYGST-TLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKK------RG 639
+G N V ++ T L + + IW +K V D L HNK+
Sbjct: 346 QGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQD-SCVHD---LQAHNKEIYTIKWSP 401
Query: 640 KGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSV-YLYT 698
GPG P L + + D S+ + G C IH T + +SV +
Sbjct: 402 TGPGTNNPNANLMLASL-DSASFD-STVRLWDVDRGIC---IHTLTKHQEPVYSVAFSPD 456
Query: 699 NRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCS 755
R+ LA+G + +HIW + GA + G T + ++ W+ +V AS S
Sbjct: 457 GRY--LASGSFDKCVHIWNT-QTGALVHSYR---G-TGGIFEVCWNAAGDKVGASAS 506
Score = 54 (24.1 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 12/41 (29%), Positives = 21/41 (51%)
Query: 648 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPRE 688
P+ +F GH E A+ W T +LA+ + IW+ ++
Sbjct: 341 PIKTFQGHTNEVNAIKWDPTG-NLLASCSDDMTLKIWSMKQ 380
Score = 52 (23.4 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 15/64 (23%), Positives = 26/64 (40%)
Query: 472 EIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTII 531
E+ + W P G ++++ + + S + + KEI + W P PGT
Sbjct: 351 EVNAIKWDPT--GNLLASCSDDMTLKIWSMKQDSCVHDLQAHNKEIYTIKWSPTGPGTNN 408
Query: 532 STAN 535
AN
Sbjct: 409 PNAN 412
Score = 45 (20.9 bits), Expect = 7.1e-08, Sum P(2) = 7.1e-08
Identities = 10/21 (47%), Positives = 11/21 (52%)
Query: 471 KEIKELHWHPQLPGTIISTAN 491
KEI + W P PGT AN
Sbjct: 392 KEIYTIKWSPTGPGTNNPNAN 412
>TAIR|locus:2089179 [details] [associations]
symbol:AT3G27640 "AT3G27640" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0006261 "DNA-dependent DNA
replication" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0080008 KO:K11790 EMBL:AY035167 EMBL:AY063003 IPI:IPI00539568
RefSeq:NP_566822.1 UniGene:At.19178 ProteinModelPortal:Q94C55
SMR:Q94C55 PRIDE:Q94C55 EnsemblPlants:AT3G27640.1 GeneID:822386
KEGG:ath:AT3G27640 TAIR:At3g27640 InParanoid:Q94C55 OMA:NRIYLYN
PhylomeDB:Q94C55 ProtClustDB:CLSN2688846 ArrayExpress:Q94C55
Genevestigator:Q94C55 Uniprot:Q94C55
Length = 535
Score = 124 (48.7 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 44/144 (30%), Positives = 67/144 (46%)
Query: 259 GIPTPPL---FSFSGHLTEGFAMDWSSTEPG--VLATGDCKRNIHIWTPREAGAWQVDQK 313
GI TPPL F + ++ FA+ S E G L K+ T +E + +
Sbjct: 67 GIWTPPLAVSFCKTSRNSQLFAV---SDEDGHVSLFNSSSKKFASSATHQE-NTEKARFR 122
Query: 314 PLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDV-NVI 372
+ H N++ D+ W G+ +L + S D +I++WD + C L HT V ++
Sbjct: 123 DWIAHYNAIFDISWIKGDSCLLTA-SGDQTIKVWD---VEENKCTGVLIG-HTGTVKSMC 177
Query: 373 SWNRTEPLIVSGGDDGCIHVWDLR 396
S L+VSG DGC +WDLR
Sbjct: 178 SHPTNSDLLVSGSRDGCFALWDLR 201
Score = 115 (45.5 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 28/88 (31%), Positives = 40/88 (45%)
Query: 364 AHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTE 423
AH + + ISW + + +++ D I VWD+ K HT V ++ HPT
Sbjct: 126 AHYNAIFDISWIKGDSCLLTASGDQTIKVWDVEENK---CTGVLIGHTGTVKSMCSHPTN 182
Query: 424 SSTFASGGADDQIALWDLAVERDSEIEQ 451
S SG D ALWDL + S E+
Sbjct: 183 SDLLVSGSRDGCFALWDLRCKSSSHKEE 210
Score = 90 (36.7 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 17/61 (27%), Positives = 31/61 (50%)
Query: 381 IVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWD 440
++SG DG ++W + + + + K H VT V+W P+E A+ D + LW+
Sbjct: 353 VLSGSSDGNAYIWQVNKPQVDPII--LKGHDFEVTAVDWSPSEIGKVATASDDFTVRLWN 410
Query: 441 L 441
+
Sbjct: 411 I 411
Score = 66 (28.3 bits), Expect = 3.7e-06, Sum P(3) = 3.7e-06
Identities = 19/57 (33%), Positives = 27/57 (47%)
Query: 706 TGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRI 762
+G N +IW + QVD L GH V + WSP E +A+ S D + R+
Sbjct: 355 SGSSDGNAYIWQVNKP---QVDPIILKGHDFEVTAVDWSPSEIGKVATASDDFTVRL 408
Score = 59 (25.8 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 654 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIW 684
GH E A+DWS +E G +AT + +W
Sbjct: 379 GHDFEVTAVDWSPSEIGKVATASDDFTVRLW 409
Score = 41 (19.5 bits), Expect = 3.7e-06, Sum P(3) = 3.7e-06
Identities = 8/34 (23%), Positives = 17/34 (50%)
Query: 408 KHHTAPVTTVEWHPTESSTFASGGADDQIALWDL 441
K ++ +T+V + E + +G D + WD+
Sbjct: 235 KAASSSITSVLYVKDEITIATAGAPDSALKFWDI 268
>UNIPROTKB|C3UJQ7 [details] [associations]
symbol:TBL1Y "Transducin (Beta)-like 1 Y-linked"
species:9593 "Gorilla gorilla" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] [GO:0007605 "sensory perception of
sound" evidence=ISS] [GO:0008013 "beta-catenin binding"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0006508 GO:GO:0000122 GO:GO:0007605 InterPro:IPR013720
Pfam:PF08513 GO:GO:0042393 GO:GO:0008013 GO:GO:0060070
GO:GO:0005876 HOGENOM:HOG000220902 EMBL:FJ532265
ProteinModelPortal:C3UJQ7 Uniprot:C3UJQ7
Length = 524
Score = 165 (63.1 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 70/272 (25%), Positives = 114/272 (41%)
Query: 180 FAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQ 239
FA+ W+ +L+ G K I IW A Q Q P H+ A D+ W + T
Sbjct: 280 FALKWNKKGNYILSAGVDKTTI-IWDAHTGEAKQ--QFPF--HSAPALDVDWQNNTTFAS 334
Query: 240 TVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRN--I 297
D + H + G P+ +F GH E A+ W +P + C + +
Sbjct: 335 CGTD---MCIHVCRLGCDL-----PVKTFQGHTNEVNAIKW---DPSGMLLASCSDDMTL 383
Query: 298 HIWTPREAGAWQVDQKPLVGHTNSVEDLQWSP--------GEKRVLASCSVDLSIRIWDT 349
IW+ ++ A D L H+ + ++WSP +LAS S D ++R+WD
Sbjct: 384 KIWSMKQ-DACVHD---LQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLWD- 438
Query: 350 RVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKH 409
+ C TL H V I+++ + SG D C+H+W+ + GS V +++
Sbjct: 439 --VEQGVCTHTLTK-HQEPVYSIAFSPDGKYLASGSFDKCVHIWNTQ---SGSLVHSYQG 492
Query: 410 HTAPVTTVEWHPTESSTFASGGADDQIALWDL 441
T + V W+ AS +D + + DL
Sbjct: 493 -TGGIFEVCWNARGDKVGASA-SDGSVCVLDL 522
Score = 164 (62.8 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
Identities = 76/306 (24%), Positives = 117/306 (38%)
Query: 150 QLAEHNKKRGKGPGIPTPPLFS--FSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPR 207
++ H+K + PP + GH +E F W+ +LA+G IW
Sbjct: 151 EINNHSKPMEIDRDVEIPPNKATVLRGHESEVFICAWNPVSD-LLASGSGDSTARIWNLN 209
Query: 208 EAGAWQVDQKPLGGHTNSA-EDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLF 266
E Q L D+ + T+L D LA + L
Sbjct: 210 ENSNGGSTQLVLRHCIREGWHDVPSNKDVTSLDWNSDGTLLAMGSYDGFARIWTENGNLA 269
Query: 267 SFSG-HLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDL 325
S G H FA+ W+ +L+ G K I IW A Q Q P H+ D+
Sbjct: 270 STLGQHKGPIFALKWNKKGNYILSAGVDKTTI-IWDAHTGEAKQ--QFPF--HSAPALDV 324
Query: 326 QWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPN--AHTSDVNVISWNRTEPLIVS 383
W ASC D+ I + R+ C L + HT++VN I W+ + L+ S
Sbjct: 325 DWQ--NNTTFASCGTDMCIHV--CRL----GCDLPVKTFQGHTNEVNAIKWDPSGMLLAS 376
Query: 384 GGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESST--------FASGGADDQ 435
DD + +W + K+ + V + H+ + T++W PT +T AS D
Sbjct: 377 CSDDMTLKIWSM---KQDACVHDLQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDST 433
Query: 436 IALWDL 441
+ LWD+
Sbjct: 434 VRLWDV 439
Score = 41 (19.5 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
Identities = 10/32 (31%), Positives = 18/32 (56%)
Query: 672 LATGDCKRNIHIWTPREAGAWSVYLYTNRFGV 703
LA+G + +HIW ++G+ V+ Y G+
Sbjct: 467 LASGSFDKCVHIWNT-QSGSL-VHSYQGTGGI 496
Score = 41 (19.5 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
Identities = 17/74 (22%), Positives = 31/74 (41%)
Query: 682 HIWTPREAGAWSVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDL 741
H T + +S+ ++ LA+G + +HIW + Q G T + ++
Sbjct: 446 HTLTKHQEPVYSI-AFSPDGKYLASGSFDKCVHIWNTQSGSLVHSYQ----G-TGGIFEV 499
Query: 742 QWSPGEKRVLASCS 755
W+ +V AS S
Sbjct: 500 CWNARGDKVGASAS 513
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 163 (62.4 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 70/270 (25%), Positives = 120/270 (44%)
Query: 267 SFSGHLTEGFAMDWS-STEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDL 325
+ GH G M+ +T+ +L + + + +W E G +V K L GHT+ V
Sbjct: 104 TLKGH--SGAVMELHYNTDGSMLFSASTDKTVAVWDS-ETGE-RV--KRLKGHTSFVNSC 157
Query: 326 QWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGG 385
+ +++ + S D ++++WD R K+ + T N T V +++N T I+SGG
Sbjct: 158 YPARRGPQLVCTGSDDGTVKLWDIR---KKAAIQTFQN--TYQVLAVTFNDTSDQIISGG 212
Query: 386 DDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVER 445
D I VWDLR+ K T + H VT + +E S S D+ + +WD+
Sbjct: 213 IDNDIKVWDLRQNKL---TYTMRGHADSVTGLSLS-SEGSYLLSNAMDNTVRVWDVR--- 265
Query: 446 DSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPS 505
+E +K +H +K + W P G+ I+ ++ ++ + D S
Sbjct: 266 --PFAPKERCVKIFQGN---VHNFEKNLLRCSWSPD--GSKIAAGSADRFVY--VWDTTS 316
Query: 506 QLLFIHL-GQK-EIKELHWHPQLPGTIIST 533
+ + L G I E+ +HP P II T
Sbjct: 317 RRILYKLPGHAGSINEVAFHPDEP--IIET 344
>ASPGD|ASPL0000074357 [details] [associations]
symbol:AN4518 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 EMBL:BN001303 EMBL:AACD01000078
OrthoDB:EOG4RBTST RefSeq:XP_662122.1 ProteinModelPortal:Q5B4L2
EnsemblFungi:CADANIAT00005923 GeneID:2872316 KEGG:ani:AN4518.2
HOGENOM:HOG000184038 OMA:DVKWSHG Uniprot:Q5B4L2
Length = 1289
Score = 170 (64.9 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 38/133 (28%), Positives = 65/133 (48%)
Query: 317 GHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLP-----NAHTSDVNV 371
GH+ V L ++P + L S S D IR+WD R + T + N+++ V
Sbjct: 191 GHSRQVHRLAFNPHQPAWLLSGSQDAHIRMWDLRTVPTDRGVSVCGSRDQYNSNSDAVRD 250
Query: 372 ISWNRTEPLIVS-GGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASG 430
+ W+ + ++ + D G I +WD+R K S + H P +V+WHP + SG
Sbjct: 251 VRWSPGDGVLFAVATDSGAIQLWDIR--KSSSPILRITAHDRPCYSVDWHP-DGKHIVSG 307
Query: 431 GADDQIALWDLAV 443
G D Q+ +W+ ++
Sbjct: 308 GTDRQVKVWEFSI 320
Score = 145 (56.1 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 43/174 (24%), Positives = 75/174 (43%)
Query: 268 FSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIW----TPREAGAWQVDQKPLVG-HTNSV 322
F GH + + ++ +P L +G +I +W P + G + ++++V
Sbjct: 189 FQGHSRQVHRLAFNPHQPAWLLSGSQDAHIRMWDLRTVPTDRGVSVCGSRDQYNSNSDAV 248
Query: 323 EDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIV 382
D++WSPG+ + A + +I++WD R + S +L + AH + W+ IV
Sbjct: 249 RDVRWSPGDGVLFAVATDSGAIQLWDIR--KSSSPILRI-TAHDRPCYSVDWHPDGKHIV 305
Query: 383 SGGDDGCIHVWDLRRFKKGSSVATFKHHTAP-VTTVEWHPTESSTFASGGADDQ 435
SGG D + VW+ + F+ T V V W P S + D Q
Sbjct: 306 SGGTDRQVKVWEFSITAERRQKPLFQFRTPQAVLNVRWRPPSWSRESDSSGDWQ 359
>POMBASE|SPAC821.08c [details] [associations]
symbol:slp1 "sleepy homolog Slp1" species:4896
"Schizosaccharomyces pombe" [GO:0000070 "mitotic sister chromatid
segregation" evidence=IGI] [GO:0000778 "condensed nuclear
chromosome kinetochore" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005819
"spindle" evidence=IDA] [GO:0007092 "activation of mitotic
anaphase-promoting complex activity" evidence=TAS] [GO:0007094
"mitotic spindle assembly checkpoint" evidence=IGI] [GO:0010997
"anaphase-promoting complex binding" evidence=IPI] [GO:0031577
"spindle checkpoint" evidence=IPI] [GO:0032153 "cell division site"
evidence=IDA] [GO:0033314 "mitotic DNA replication checkpoint"
evidence=IGI] [GO:0033597 "mitotic checkpoint complex"
evidence=IDA] [GO:0034613 "cellular protein localization"
evidence=IMP] [GO:0044732 "mitotic spindle pole body" evidence=IDA]
[GO:0045842 "positive regulation of mitotic metaphase/anaphase
transition" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC821.08c EMBL:CU329670 GO:GO:0034613
GO:GO:0051301 GenomeReviews:CU329670_GR GO:GO:0007094
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0032153 GO:GO:0044732 eggNOG:COG2319
GO:GO:0000070 GO:GO:0000778 GO:GO:0007092 GO:GO:0033314
GO:GO:0033597 KO:K03363 HOGENOM:HOG000195514 OrthoDB:EOG4KD9V8
PDB:4AEZ PDBsum:4AEZ EMBL:U77983 PIR:T41719 RefSeq:NP_593161.1
ProteinModelPortal:P78972 DIP:DIP-38036N IntAct:P78972
STRING:P78972 EnsemblFungi:SPAC821.08c.1 GeneID:2543222
KEGG:spo:SPAC821.08c OMA:GINTSSH NextBio:20804244 Uniprot:P78972
Length = 488
Score = 164 (62.8 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 59/190 (31%), Positives = 92/190 (48%)
Query: 309 QVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSD 368
Q + + GH V L W+ + VL+S S +I D R+ N + + TL H+S+
Sbjct: 253 QTKLRTMAGHQARVGCLSWN---RHVLSSGSRSGAIHHHDVRIANHQ--IGTL-QGHSSE 306
Query: 369 VNVISWNRTEPL-IVSGGDDGCIHVWDLRRFKKGSSVATFK--HHTAPVTTVEWHPTESS 425
V ++W R++ L + SGG+D + +WD R SS+ F +H A V V W P +S+
Sbjct: 307 VCGLAW-RSDGLQLASGGNDNVVQIWDAR-----SSIPKFTKTNHNAAVKAVAWCPWQSN 360
Query: 426 TFASGGA--DDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLP 483
A+GG D QI W+ A + + +A + S + H KEI H P
Sbjct: 361 LLATGGGTMDKQIHFWNAAT--GARVNTVDAG-SQVTSLIWSPH--SKEIMSTHGFPDNN 415
Query: 484 GTIISTANSG 493
+I S ++SG
Sbjct: 416 LSIWSYSSSG 425
>UNIPROTKB|Q4R8H1 [details] [associations]
symbol:TBL1X "F-box-like/WD repeat-containing protein
TBL1X" species:9541 "Macaca fascicularis" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0005876 "spindle microtubule" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0007605 "sensory
perception of sound" evidence=ISS] [GO:0008013 "beta-catenin
binding" evidence=ISS] [GO:0017053 "transcriptional repressor
complex" evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0006508 GO:GO:0006351 GO:GO:0000122 GO:GO:0007605
InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393 GO:GO:0008013
GO:GO:0060070 GO:GO:0005876 HSSP:P16649 EMBL:AB168481
ProteinModelPortal:Q4R8H1 Uniprot:Q4R8H1
Length = 569
Score = 165 (63.1 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 68/272 (25%), Positives = 113/272 (41%)
Query: 180 FAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQ 239
FA+ W+ +L+ G K I IW A Q Q P H+ A D+ W + T
Sbjct: 325 FALKWNRKGNYILSAGVDKTTI-IWDAHTGEAKQ--QFPF--HSAPALDVDWQNNMTFAS 379
Query: 240 TVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRN--I 297
D + H + G P+ +F GH E A+ W +P + C + +
Sbjct: 380 CSTD---MCIHVCRLGCDR-----PVKTFQGHTNEVNAIKW---DPSGMLLASCSDDMTL 428
Query: 298 HIWTPREAGAWQVDQKPLVGHTNSVEDLQWSP--------GEKRVLASCSVDLSIRIWDT 349
IW+ ++ +V L H + ++WSP +LAS S D ++R+WD
Sbjct: 429 KIWSMKQ----EVCIHDLQAHNKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWD- 483
Query: 350 RVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKH 409
I C TL H V ++++ + SG D C+H+W+ + G+ V +++
Sbjct: 484 --IERGVCTHTLTK-HQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQ---SGNLVHSYRG 537
Query: 410 HTAPVTTVEWHPTESSTFASGGADDQIALWDL 441
T + V W+ AS +D + + DL
Sbjct: 538 -TGGIFEVCWNARGDKVGASA-SDGSVCVLDL 567
Score = 160 (61.4 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 75/293 (25%), Positives = 115/293 (39%)
Query: 164 IPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPRE---AGAWQVDQKPL- 219
IP+ GH +E F W+ +LA+G IW E G+ Q+ +
Sbjct: 212 IPSSKATVLRGHESEVFICAWNPVSD-LLASGSGDSTARIWNLNENSNGGSTQLVLRHCI 270
Query: 220 --GGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSG-HLTEGF 276
GGH D+ + T+L + LA + L S G H F
Sbjct: 271 REGGH-----DVPSNKDVTSLDWNTNGTLLATGSYDGFARIWTEDGNLASTLGQHKGPIF 325
Query: 277 AMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLA 336
A+ W+ +L+ G K I IW A Q Q P H+ D+ W A
Sbjct: 326 ALKWNRKGNYILSAGVDKTTI-IWDAHTGEAKQ--QFPF--HSAPALDVDWQ--NNMTFA 378
Query: 337 SCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLR 396
SCS D+ I + R + + T HT++VN I W+ + L+ S DD + +W +
Sbjct: 379 SCSTDMCIHV--CR-LGCDRPVKTF-QGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSM- 433
Query: 397 RFKKGSSVATFKHHTAPVTTVEWHPTESST--------FASGGADDQIALWDL 441
K+ + + H + T++W PT +T AS D + LWD+
Sbjct: 434 --KQEVCIHDLQAHNKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDI 484
Score = 105 (42.0 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 26/99 (26%), Positives = 43/99 (43%)
Query: 352 INTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVA-TFKH- 409
++ S T+ H S+V + +WN L+ SG D +W+L G S +H
Sbjct: 210 VDIPSSKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHC 269
Query: 410 -----HTAP----VTTVEWHPTESSTFASGGADDQIALW 439
H P VT+++W+ T + A+G D +W
Sbjct: 270 IREGGHDVPSNKDVTSLDWN-TNGTLLATGSYDGFARIW 307
Score = 70 (29.7 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 15/34 (44%), Positives = 20/34 (58%)
Query: 729 KPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRI 762
K GHTN V ++W P +LASCS D + +I
Sbjct: 398 KTFQGHTNEVNAIKWDPSGM-LLASCSDDMTLKI 430
>ASPGD|ASPL0000031743 [details] [associations]
symbol:AN8505 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001305 ProteinModelPortal:C8VEM4
EnsemblFungi:CADANIAT00002997 HOGENOM:HOG000234485 OMA:WDAQTGS
Uniprot:C8VEM4
Length = 954
Score = 168 (64.2 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 49/156 (31%), Positives = 76/156 (48%)
Query: 287 VLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRI 346
VLA+G + +W P Q+ L GH+ V + +SP + R+LAS S D ++R+
Sbjct: 709 VLASGSDDETVRLWDPATGSL----QQTLEGHSGWVLSVAFSP-DGRLLASGSFDKTVRL 763
Query: 347 WDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVAT 406
WD T S TL H++ V ++++ L+ SG D + +WD GS T
Sbjct: 764 WDPA---TGSLQQTL-RGHSNWVRSVAFSPDGRLLASGSFDKTVRLWDPAT---GSLQQT 816
Query: 407 FKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442
+ H+ V +V + P + ASG D + LWD A
Sbjct: 817 LRGHSDTVRSVAFSP-DGRLLASGSFDKTVRLWDPA 851
>WB|WBGene00022119 [details] [associations]
symbol:Y71F9AL.17 species:6239 "Caenorhabditis elegans"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0032940 "secretion by cell"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR011041 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009792 GO:GO:0040010
GO:GO:0006915 GO:GO:0006886 GO:GO:0003824 GO:GO:0002119
GO:GO:0032940 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0000003
GO:GO:0008152 GO:GO:0030126 EMBL:FO081777 HOGENOM:HOG000195913
KO:K05236 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 OMA:YDQHNPF SUPFAM:SSF50952
RefSeq:NP_491069.1 ProteinModelPortal:Q9N4H7 SMR:Q9N4H7
DIP:DIP-24621N IntAct:Q9N4H7 MINT:MINT-1075577 STRING:Q9N4H7
PaxDb:Q9N4H7 EnsemblMetazoa:Y71F9AL.17 GeneID:171860
KEGG:cel:CELE_Y71F9AL.17 UCSC:Y71F9AL.17 CTD:171860
WormBase:Y71F9AL.17 InParanoid:Q9N4H7 NextBio:873005 Uniprot:Q9N4H7
Length = 1232
Score = 124 (48.7 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 29/119 (24%), Positives = 56/119 (47%)
Query: 331 EKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCI 390
++ + S D I++W+ + K C+ TL H + ++ P I+S DD +
Sbjct: 64 DQPIFVSGGDDYKIKVWNYK---QKRCIFTLLG-HLDYIRTTFFHHKYPWIISASDDQTV 119
Query: 391 HVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEI 449
+W+ ++ +S+A H V ++HPTE AS D + +WD++ R ++
Sbjct: 120 RIWN---WQSRNSIAILTGHNHYVMCAQFHPTEDLV-ASASLDQTVRVWDISGLRKKQM 174
Score = 102 (41.0 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 33/121 (27%), Positives = 57/121 (47%)
Query: 322 VEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLP-NAHTSDVNVISWNRTEPL 380
V+ + + P VL S + I++WD R+ C+L + H V I ++ +P+
Sbjct: 14 VKGISFHPTRPWVLTSLHSGV-IQLWDYRM-----CVLLEKFDEHDGPVRGICFHHDQPI 67
Query: 381 IVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQ-IALW 439
VSGGDD I VW+ +K+ + T H + T +H + +DDQ + +W
Sbjct: 68 FVSGGDDYKIKVWN---YKQKRCIFTLLGHLDYIRTTFFH--HKYPWIISASDDQTVRIW 122
Query: 440 D 440
+
Sbjct: 123 N 123
Score = 98 (39.6 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 27/94 (28%), Positives = 46/94 (48%)
Query: 682 HIWTPREAGA-WSVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVED 740
H+ + G W + +TN +L +G R + IW E AW++D GH N+V
Sbjct: 201 HVLEGHDRGVNWVAFHHTNP--ILVSGSDDRQVKIWRYNETKAWELDS--CRGHYNNVSS 256
Query: 741 LQWSPGEKRVLASCSVDRSNRIG--ARRDMLYCF 772
+ + P +L++ S D+S R+ +R L+ F
Sbjct: 257 VIFHPNADLILSN-SEDKSIRVWDMQKRTSLHVF 289
Score = 88 (36.0 bits), Expect = 8.0e-05, Sum P(2) = 8.0e-05
Identities = 23/77 (29%), Positives = 37/77 (48%)
Query: 369 VNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFA 428
V IS++ T P +++ G I +WD R + F H PV + +H + F
Sbjct: 14 VKGISFHPTRPWVLTSLHSGVIQLWDYRMCVL---LEKFDEHDGPVRGICFHH-DQPIFV 69
Query: 429 SGGADDQIALWDLAVER 445
SGG D +I +W+ +R
Sbjct: 70 SGGDDYKIKVWNYKQKR 86
Score = 78 (32.5 bits), Expect = 0.00083, Sum P(2) = 0.00083
Identities = 26/97 (26%), Positives = 45/97 (46%)
Query: 308 WQVDQK----PLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPN 363
W QK L+GH + + + ++ S S D ++RIW+ + N+ + +LT
Sbjct: 80 WNYKQKRCIFTLLGHLDYIRTTFFHHKYPWII-SASDDQTVRIWNWQSRNSIA-ILT--- 134
Query: 364 AHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKK 400
H V ++ TE L+ S D + VWD+ +K
Sbjct: 135 GHNHYVMCAQFHPTEDLVASASLDQTVRVWDISGLRK 171
Score = 56 (24.8 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 14/45 (31%), Positives = 22/45 (48%)
Query: 655 HLTEGF--AMDWSS---TEPGVLATGDCKRNIHIWTPREAGAWSV 694
H+ EG ++W + T P +L +G R + IW E AW +
Sbjct: 201 HVLEGHDRGVNWVAFHHTNP-ILVSGSDDRQVKIWRYNETKAWEL 244
>FB|FBgn0035922 [details] [associations]
symbol:Pex7 "Peroxin 7" species:7227 "Drosophila
melanogaster" [GO:0007031 "peroxisome organization" evidence=ISS]
[GO:0005053 "peroxisome matrix targeting signal-2 binding"
evidence=ISS] [GO:0005777 "peroxisome" evidence=ISS] [GO:0016558
"protein import into peroxisome matrix" evidence=IEA] [GO:0006911
"phagocytosis, engulfment" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006911 EMBL:AE014296 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016558 KO:K13341
OMA:GHEYAVR GO:GO:0005053 PANTHER:PTHR22850:SF4
GeneTree:ENSGT00700000104578 RefSeq:NP_001137914.1
RefSeq:NP_648251.1 UniGene:Dm.15472 SMR:Q9VSN7 DIP:DIP-21383N
IntAct:Q9VSN7 MINT:MINT-790667 STRING:Q9VSN7
EnsemblMetazoa:FBtr0076568 EnsemblMetazoa:FBtr0273328 GeneID:38994
KEGG:dme:Dmel_CG6486 UCSC:CG6486-RA FlyBase:FBgn0035922
InParanoid:Q9VSN7 OrthoDB:EOG431ZDN ChiTaRS:CG6486 GenomeRNAi:38994
NextBio:811365 Uniprot:Q9VSN7
Length = 339
Score = 154 (59.3 bits), Expect = 7.6e-08, P = 7.6e-08
Identities = 49/198 (24%), Positives = 79/198 (39%)
Query: 261 PTPPLFSFSGHLTEGFAMDWSST-EPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHT 319
P PL H E +++DW L +G + +W Q VGH
Sbjct: 112 PKQPLICLQEHKNEVYSLDWGEKWNYHTLLSGSWDCTLKLWDCNR----QNSITTFVGHN 167
Query: 320 NSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEP 379
+ + ++SP + AS S D + +W++ K M AH S+ W+ +
Sbjct: 168 DLIYGAKFSPLIANLFASVSTDGHLNLWNSLDFAGKPLMSI--EAHASEALCCDWSHFDR 225
Query: 380 -LIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIAL 438
++V+GG DG I WDLR+ + + V V + P ++ AS D +
Sbjct: 226 NVLVTGGSDGLIRGWDLRKMR--THVFELYSGEFAVRRLACSPHSAAVLASANYDFTTRI 283
Query: 439 WDLAV-ERDSEIEQREAE 455
W+L E E+ R E
Sbjct: 284 WNLERGESAQEVNARHTE 301
Score = 124 (48.7 bits), Expect = 0.00016, P = 0.00016
Identities = 61/227 (26%), Positives = 81/227 (35%)
Query: 165 PTPPLFSFSGHLTEGFAMDWSST-EPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHT 223
P PL H E +++DW L +G + +W Q GH
Sbjct: 112 PKQPLICLQEHKNEVYSLDWGEKWNYHTLLSGSWDCTLKLWDCNR----QNSITTFVGHN 167
Query: 224 NSAEDLQWSDLKTAL-QTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSS 282
+ ++S L L +V L N G PL S H +E DWS
Sbjct: 168 DLIYGAKFSPLIANLFASVSTDGHLNLWNSLDFAGK-----PLMSIEAHASEALCCDWSH 222
Query: 283 TEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDL 342
+ VL TG I W R+ + L +V L SP VLAS + D
Sbjct: 223 FDRNVLVTGGSDGLIRGWDLRKMRTHVFE---LYSGEFAVRRLACSPHSAAVLASANYDF 279
Query: 343 SIRIWDTRVINTKSCMLTLPNA-HTSDVNVISWN--RTEPLIVSGGD 386
+ RIW+ +S NA HT V + WN RT L G D
Sbjct: 280 TTRIWNLE--RGESAQEV--NARHTEFVCGLDWNPHRTHQLADCGWD 322
Score = 105 (42.0 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 32/126 (25%), Positives = 57/126 (45%)
Query: 324 DLQWSPGEKRVLASCSVDLSIRIW---D----TRVINTKSCMLTLPNAHTSDVNVISWNR 376
D+ W P + A+ S D S++IW D + + K ++ L H ++V + W
Sbjct: 75 DVAWCPYAADIAATASGDGSLQIWCGLDGESASNQLTPKQPLICLQE-HKNEVYSLDWGE 133
Query: 377 --TEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADD 434
++SG D + +WD R +S+ TF H + ++ P ++ FAS D
Sbjct: 134 KWNYHTLLSGSWDCTLKLWDCNR---QNSITTFVGHNDLIYGAKFSPLIANLFASVSTDG 190
Query: 435 QIALWD 440
+ LW+
Sbjct: 191 HLNLWN 196
Score = 103 (41.3 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 36/123 (29%), Positives = 46/123 (37%)
Query: 648 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSVYLYTNRFGV---- 703
PL S H +E DWS + VL TG I W R+ LY+ F V
Sbjct: 204 PLMSIEAHASEALCCDWSHFDRNVLVTGGSDGLIRGWDLRKMRTHVFELYSGEFAVRRLA 263
Query: 704 --------LATGDCKRNIHIWT-PREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASC 754
LA+ + IW R A +V+ + HT V L W+P LA C
Sbjct: 264 CSPHSAAVLASANYDFTTRIWNLERGESAQEVNAR----HTEFVCGLDWNPHRTHQLADC 319
Query: 755 SVD 757
D
Sbjct: 320 GWD 322
>UNIPROTKB|B3MJV8 [details] [associations]
symbol:GF14067 "Ribosome biogenesis protein WDR12 homolog"
species:7217 "Drosophila ananassae" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CH902620 GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972
Pfam:PF08154 KO:K14863 OrthoDB:EOG4BNZTB HAMAP:MF_03029
RefSeq:XP_001963192.1 ProteinModelPortal:B3MJV8 STRING:B3MJV8
EnsemblMetazoa:FBtr0118767 GeneID:6496895 KEGG:dan:Dana_GF14067
FlyBase:FBgn0091094 InParanoid:B3MJV8 Uniprot:B3MJV8
Length = 419
Score = 160 (61.4 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 56/211 (26%), Positives = 87/211 (41%)
Query: 231 WSD-LKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLA 289
W LK +DD E KR K G+ TP + + GH A+ W + L
Sbjct: 213 WDTMLKVWSAELDDA---GEGTSKRMKESGVRTPKM-TLQGHRESISAVQWM--DASTLL 266
Query: 290 TGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDT 349
TG + +W G K + S+ D +S R++ + S D ++R++D
Sbjct: 267 TGSWDHTLKVWDLSLEGI-----KTEISTNKSIFDASYS-NLNRLIVTASADKNLRLYDA 320
Query: 350 RVINTKSCMLTLPNAHTSDVNVISWNRTEP-LIVSGGDDGCIHVWDLRRFKKGSSVATFK 408
R N S + H + V + W+ TE L VSG D +WD R K + +
Sbjct: 321 RT-NQGSVVRNTYLGHNAWVQAVMWSTTEEFLFVSGAYDNQNKLWDCRSPK--APLYDLL 377
Query: 409 HHTAPVTTVEWHPTESSTFASGGADDQIALW 439
H V ++W T SGGAD+ + ++
Sbjct: 378 GHGEKVLDIDW--TNPKYIVSGGADNSVRVF 406
Score = 147 (56.8 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 44/139 (31%), Positives = 68/139 (48%)
Query: 303 REAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLP 362
+E+G + + L GH S+ +QW + L + S D ++++WD + K+ + T
Sbjct: 236 KESGV-RTPKMTLQGHRESISAVQWM--DASTLLTGSWDHTLKVWDLSLEGIKTEIST-- 290
Query: 363 NAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVA-TFKHHTAPVTTVEWHP 421
N D + + NR LIV+ D + ++D R +GS V T+ H A V V W
Sbjct: 291 NKSIFDASYSNLNR---LIVTASADKNLRLYDART-NQGSVVRNTYLGHNAWVQAVMWST 346
Query: 422 TESSTFASGGADDQIALWD 440
TE F SG D+Q LWD
Sbjct: 347 TEEFLFVSGAYDNQNKLWD 365
Score = 105 (42.0 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 39/173 (22%), Positives = 71/173 (41%)
Query: 288 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSP--GEKRVLASCSVDLSIR 345
+ TG ++IWT + + GHT ++ + W E S S D +
Sbjct: 118 ILTGCYDNTLNIWTNKGKHILTIS-----GHTAPIKAVDWISLDEESGRFVSSSQDQTAM 172
Query: 346 IWDTRV-INTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDL--------- 395
+W V NT C+ ++ H V+ +S + +G D + VW
Sbjct: 173 LWQWNVGSNTAECV-SVCKGHERGVDSVSVSPDGQRFATGSWDTMLKVWSAELDDAGEGT 231
Query: 396 -RRFKKG---SSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444
+R K+ + T + H ++ V+W ++ST +G D + +WDL++E
Sbjct: 232 SKRMKESGVRTPKMTLQGHRESISAVQW--MDASTLLTGSWDHTLKVWDLSLE 282
Score = 61 (26.5 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 12/45 (26%), Positives = 22/45 (48%)
Query: 645 PTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREA 689
P PL+ GH + +DW T P + +G ++ ++ R+A
Sbjct: 369 PKAPLYDLLGHGEKVLDIDW--TNPKYIVSGGADNSVRVFKSRKA 411
>UNIPROTKB|B7QKS1 [details] [associations]
symbol:ISCW023049 "Probable cytosolic iron-sulfur protein
assembly protein" species:6945 "Ixodes scapularis" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 OMA:SWKCVCT
OrthoDB:EOG45DV4X EMBL:DS961804 RefSeq:XP_002415776.1
UniGene:Isc.5088 ProteinModelPortal:B7QKS1 STRING:B7QKS1
EnsemblMetazoa:ISCW023049-RA GeneID:8042725
KEGG:isc:IscW_ISCW023049 VectorBase:ISCW023049 CTD:8042725
PhylomeDB:B7QKS1 Uniprot:B7QKS1
Length = 315
Score = 159 (61.0 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 65/273 (23%), Positives = 111/273 (40%)
Query: 169 LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAED 228
L GH + + W+ + +LA+ ++I +W E G+W L GH +
Sbjct: 6 LSDLEGHEDRVWNVAWNPSGT-ILASCGGDKSIRLWG-LEGGSWVCKSVLLDGHQRTVRG 63
Query: 229 LQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVL 288
+ WS+ L + ++ T GH E A WS + L
Sbjct: 64 VSWSNCGRYLASSSFDGTTCIWRRQDDTFESCAT-----LEGHENEVKACGWSPSGR-FL 117
Query: 289 ATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWD 348
AT + + IW E ++ H+ V+ + W P ++ LAS S D +IR +
Sbjct: 118 ATCSRDKTVWIWEVGEDEEFECASVQTC-HSQDVKKVLWHP-DRDELASASYDNTIRFFC 175
Query: 349 TRVINTKSCMLTLPNAHTSDVNVISWNR-TEPLIVSGGDDGCIHVWDLRRFKKGSSVA-T 406
V + + C TL + H S V +S+ EP + S DG ++VW + ++ + T
Sbjct: 176 EEVDDWQ-CYCTL-DKHASTVWGLSFGPGPEPQLASCAADGSVYVWGTKGDRRSWELCGT 233
Query: 407 FKHHTAPVTTVEWHPTESSTFASGGADDQIALW 439
+ H PV V W T A+ D+ + ++
Sbjct: 234 LERHPRPVYDVSWCRTRGF-LATACGDNAVRVF 265
Score = 131 (51.2 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 45/161 (27%), Positives = 72/161 (44%)
Query: 288 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIW 347
LA+ I + E WQ L H ++V L + PG + LASC+ D S+ +W
Sbjct: 162 LASASYDNTIRFFC-EEVDDWQC-YCTLDKHASTVWGLSFGPGPEPQLASCAADGSVYVW 219
Query: 348 DTRVINTKSCML--TLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVW-----DLRRFKK 400
T+ + +S L TL H V +SW RT + + D + V+ D ++
Sbjct: 220 GTKG-DRRSWELCGTLER-HPRPVYDVSWCRTRGFLATACGDNAVRVFVKDGGDCS-WRL 276
Query: 401 GSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDL 441
G ++ + H+ V +V W P+ AS G D + LW +
Sbjct: 277 GCTLT--QAHSQDVNSVSWSPS-GGLLASAGDDGYVRLWQI 314
Score = 131 (51.2 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 44/178 (24%), Positives = 68/178 (38%)
Query: 270 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSP 329
GH + WS+ LA+ IW R+ ++ L GH N V+ WSP
Sbjct: 56 GHQRTVRGVSWSNCGR-YLASSSFDGTTCIWR-RQDDTFE-SCATLEGHENEVKACGWSP 112
Query: 330 GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGC 389
R LA+CS D ++ IW+ C ++ H+ DV + W+ + S D
Sbjct: 113 SG-RFLATCSRDKTVWIWEVGEDEEFECA-SVQTCHSQDVKKVLWHPDRDELASASYDNT 170
Query: 390 IHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDS 447
I + T H + V + + P AS AD + +W +R S
Sbjct: 171 IRFF-CEEVDDWQCYCTLDKHASTVWGLSFGPGPEPQLASCAADGSVYVWGTKGDRRS 227
Score = 128 (50.1 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 55/233 (23%), Positives = 96/233 (41%)
Query: 171 SFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQ 230
+ GH E A WS + LAT C R+ +W W+V + S +
Sbjct: 97 TLEGHENEVKACGWSPSGR-FLAT--CSRDKTVWI------WEVGEDE-EFECASVQTCH 146
Query: 231 WSDLKTALQTVD-DPFQLAEH-NKKRGKGPGIPTPPLF-SFSGHLTEGFAMDWSSTEPGV 287
D+K L D D A + N R + + + H + + + +
Sbjct: 147 SQDVKKVLWHPDRDELASASYDNTIRFFCEEVDDWQCYCTLDKHASTVWGLSFGPGPEPQ 206
Query: 288 LATGDCKRNIHIW-TPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRI 346
LA+ ++++W T + +W++ L H V D+ W + +C D ++R+
Sbjct: 207 LASCAADGSVYVWGTKGDRRSWELCGT-LERHPRPVYDVSWCRTRGFLATACG-DNAVRV 264
Query: 347 WDTRVINTKSCM----LTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDL 395
+ V + C TL AH+ DVN +SW+ + L+ S GDDG + +W +
Sbjct: 265 F---VKDGGDCSWRLGCTLTQAHSQDVNSVSWSPSGGLLASAGDDGYVRLWQI 314
>UNIPROTKB|B3N534 [details] [associations]
symbol:GG10358 "Ribosome biogenesis protein WDR12 homolog"
species:7220 "Drosophila erecta" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH954177
GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972 Pfam:PF08154
KO:K14863 OrthoDB:EOG4BNZTB HAMAP:MF_03029 RefSeq:XP_001969920.1
ProteinModelPortal:B3N534 EnsemblMetazoa:FBtr0130412 GeneID:6542886
KEGG:der:Dere_GG10358 FlyBase:FBgn0102667 Uniprot:B3N534
Length = 420
Score = 161 (61.7 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 71/296 (23%), Positives = 120/296 (40%)
Query: 169 LFSFSGHLTEGFAMDWSST--EPGVLATGDCKRNIHIWTPREAGAWQVDQKPL-GGHTNS 225
+ + SGH A+DW S E G + + +W G+ V+ + GH
Sbjct: 138 ILTISGHTAPIKAVDWISLDEETGRFVSTSQDQTAMLWQ-WNVGSNSVECVSVCKGHERG 196
Query: 226 AEDLQWSD--LKTALQTVDDPFQL--------AEHNKKRGKGPGIPTPPLFSFSGHLTEG 275
+ + S L+ A + D ++ AE + KR K G+ TP + + GH
Sbjct: 197 VDSVSVSPDGLRFATGSWDTMLKVWSAEQEDAAEGSSKRMKESGVRTPKI-TLQGHRESV 255
Query: 276 FAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVL 335
A+ W + L TG + +W G K + S+ D +S R++
Sbjct: 256 SAVQWM--DASTLLTGSWDHTLKVWDLSLEGI-----KTEISTNKSIFDASYSK-LNRLI 307
Query: 336 ASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEP-LIVSGGDDGCIHVWD 394
+ S D ++R++D R N S + H + V + W+ TE L VSG D +WD
Sbjct: 308 LTASADKNLRLYDPRT-NQGSVVRNTYLGHNAWVQTVMWSTTEEFLFVSGAYDNQNKLWD 366
Query: 395 LRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDL--AVERDSE 448
R K + + H V ++W + SGG D+ + ++ A+ D+E
Sbjct: 367 CRSPK--APLYDLLGHGEKVLDIDW--SNPKYIVSGGVDNTVRVFKSRKALAEDTE 418
Score = 112 (44.5 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 36/158 (22%), Positives = 65/158 (41%)
Query: 614 GIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLA 673
G WD + + + AE + KR K G+ TP + + GH A+ W + L
Sbjct: 212 GSWDTMLKVWSAEQE-DAAEGSSKRMKESGVRTPKI-TLQGHRESVSAVQWM--DASTLL 267
Query: 674 TGDCKRNIHIWTPREAGAW-------SVY--LYTNRFGVLATGDCKRNIHIWTPREAGAW 724
TG + +W G S++ Y+ ++ T +N+ ++ PR
Sbjct: 268 TGSWDHTLKVWDLSLEGIKTEISTNKSIFDASYSKLNRLILTASADKNLRLYDPR-TNQG 326
Query: 725 QVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRI 762
V + +GH V+ + WS E+ + S + D N++
Sbjct: 327 SVVRNTYLGHNAWVQTVMWSTTEEFLFVSGAYDNQNKL 364
Score = 89 (36.4 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 22/69 (31%), Positives = 31/69 (44%)
Query: 381 IVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESST--FASGGADDQIAL 438
I+SG D +++W KG + T HTAP+ V+W + T F S D L
Sbjct: 119 ILSGCYDNTLNLWT----NKGKHILTISGHTAPIKAVDWISLDEETGRFVSTSQDQTAML 174
Query: 439 WDLAVERDS 447
W V +S
Sbjct: 175 WQWNVGSNS 183
>POMBASE|SPBC354.03 [details] [associations]
symbol:swd3 "WD repeat protein Swd3" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IC] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006342 "chromatin silencing" evidence=IC] [GO:0048188
"Set1C/COMPASS complex" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC354.03 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR GO:GO:0006338 GO:GO:0000790 GO:GO:0006342
GO:GO:0048188 GO:GO:0051568 PIR:T40283 RefSeq:NP_595227.1
ProteinModelPortal:O43017 STRING:O43017 EnsemblFungi:SPBC354.03.1
GeneID:2540929 KEGG:spo:SPBC354.03 KO:K14963 OrthoDB:EOG49CTJ0
NextBio:20802044 Uniprot:O43017
Length = 380
Score = 160 (61.4 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 44/154 (28%), Positives = 74/154 (48%)
Query: 288 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIW 347
+AT I IW+ A ++++ L GH + ++W+ G K LAS S D +IRIW
Sbjct: 69 IATSSSDGTIKIWS---ALTFRLECT-LFGHYRGISQVKWATGSK-YLASASDDKTIRIW 123
Query: 348 DTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATF 407
D K C + HT+ V+ I +N L+VSG D + +W+L+ G+ +
Sbjct: 124 DFE----KRCSVRCLKGHTNYVSSIDFNPLGTLLVSGSWDETVRIWNLQ---DGTCLRML 176
Query: 408 KHHTAPVTTVEWHPTESSTFASGGADDQIALWDL 441
H+ P+ +V + + A+ D +WD+
Sbjct: 177 PAHSEPIISVSIS-ADGTLCATASYDGMARIWDV 209
Score = 154 (59.3 bits), Expect = 9.9e-08, P = 9.9e-08
Identities = 39/127 (30%), Positives = 62/127 (48%)
Query: 315 LVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISW 374
L GH SV + SP KR +A+ S D +I+IW + C L H ++ + W
Sbjct: 50 LFGHEKSVTCVSVSPN-KRWIATSSSDGTIKIWSALTFRLE-CTLF---GHYRGISQVKW 104
Query: 375 NRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADD 434
+ S DD I +WD F+K SV K HT V++++++P + SG D+
Sbjct: 105 ATGSKYLASASDDKTIRIWD---FEKRCSVRCLKGHTNYVSSIDFNPL-GTLLVSGSWDE 160
Query: 435 QIALWDL 441
+ +W+L
Sbjct: 161 TVRIWNL 167
>SGD|S000002535 [details] [associations]
symbol:MTC5 "Subunit of the SEA (Seh1-associated) complex"
species:4932 "Saccharomyces cerevisiae" [GO:0000329 "fungal-type
vacuole membrane" evidence=IDA] [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005774 "vacuolar membrane" evidence=IEA] [GO:0035859
"Seh1-associated complex" evidence=IDA] [GO:0097042 "extrinsic to
fungal-type vacuolar membrane" evidence=IDA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0005773 "vacuole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006575 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50908 SMART:SM00320 SMART:SM00591
SGD:S000002535 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015031 eggNOG:COG2319 EMBL:BK006938
EMBL:Z48179 GO:GO:0097042 GO:GO:0035859
GeneTree:ENSGT00650000093352 OMA:INPSGRD OrthoDB:EOG43BQX2
PIR:S51855 RefSeq:NP_010413.3 RefSeq:NP_010417.3
ProteinModelPortal:Q03897 SMR:Q03897 DIP:DIP-1825N IntAct:Q03897
MINT:MINT-402415 STRING:Q03897 PaxDb:Q03897 PeptideAtlas:Q03897
EnsemblFungi:YDR128W GeneID:851706 GeneID:851710 KEGG:sce:YDR128W
KEGG:sce:YDR132C CYGD:YDR128w NextBio:969389 Genevestigator:Q03897
GermOnline:YDR128W Uniprot:Q03897
Length = 1148
Score = 167 (63.8 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 49/184 (26%), Positives = 90/184 (48%)
Query: 262 TPPLFSFSGHLTEGFAMD--WSS--TEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVG 317
TPP + H+T D WS +P + + ++ I IW ++ + ++ L G
Sbjct: 57 TPPRWLH--HITPWQVADVQWSPHPAKPYWIVSTSNQKAI-IWNLAKSSSNAIEFV-LHG 112
Query: 318 HTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRT 377
H+ ++ D+ ++P VLA+CSVD + WD R + + T ++ S + + WN
Sbjct: 113 HSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPH-RPFYST--SSWRSAASQVKWNYK 169
Query: 378 EPLIVSGGDDGCIHVWDLRRFKKGSS-VATFKHHTAPVTTVEWHPTESSTFASGGADDQI 436
+P +++ I VWDLR KGS+ + + K H + V +++++ + S S D +
Sbjct: 170 DPNVLASSHGNDIFVWDLR---KGSTPLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTV 226
Query: 437 ALWD 440
WD
Sbjct: 227 KFWD 230
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 163 (62.4 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 52/176 (29%), Positives = 83/176 (47%)
Query: 271 HLTEGFAMDWS-----STEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDL 325
H EG DW S + +LA+ + IW + G + Q L GH + V +
Sbjct: 373 HTLEGHR-DWVRSVIFSHDSQLLASASDDSTVKIW---DTGTGSL-QHTLEGHRDWVRSV 427
Query: 326 QWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGG 385
+S + ++LAS S D +++IWDT T S TL H V + ++ L+ S
Sbjct: 428 IFSH-DSQLLASASDDSTVKIWDT---GTGSLQHTL-EGHRDWVRSVIFSHDSRLLASAS 482
Query: 386 DDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDL 441
DD + +WD +KGS T + H++ VT+V + +S AS D + +WD+
Sbjct: 483 DDRTVRIWDT---EKGSHKHTLEGHSSLVTSVSFSH-DSRLLASASNDQTVRIWDI 534
Score = 129 (50.5 bits), Expect = 0.00011, P = 0.00011
Identities = 48/171 (28%), Positives = 75/171 (43%)
Query: 297 IHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKS 356
+ IW + G + Q L GH + V + +S + ++LAS S D +++IWDT T S
Sbjct: 361 VKIW---DTGTGSL-QHTLEGHRDWVRSVIFSH-DSQLLASASDDSTVKIWDT---GTGS 412
Query: 357 CMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTT 416
TL H V + ++ L+ S DD + +WD GS T + H V +
Sbjct: 413 LQHTL-EGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGT---GSLQHTLEGHRDWVRS 468
Query: 417 VEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIH 467
V + +S AS D + +WD E+ S E L + + F H
Sbjct: 469 VIFSH-DSRLLASASDDRTVRIWD--TEKGSHKHTLEGH-SSLVTSVSFSH 515
Score = 125 (49.1 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 41/139 (29%), Positives = 63/139 (45%)
Query: 302 PREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTL 361
P A W + L GH +V + +S + R+LAS S D +++IWDT T S TL
Sbjct: 279 PDVANHWSPCLQALEGHEAAVLSVSYSH-DSRLLASASDDRTVKIWDTE---TGSLQHTL 334
Query: 362 PNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHP 421
H+ V + ++ L+ S D + +WD GS T + H V +V +
Sbjct: 335 -EGHSDLVRSVIFSHDSRLLASASDS-TVKIWDTGT---GSLQHTLEGHRDWVRSVIFSH 389
Query: 422 TESSTFASGGADDQIALWD 440
+S AS D + +WD
Sbjct: 390 -DSQLLASASDDSTVKIWD 407
Score = 64 (27.6 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 20/67 (29%), Positives = 37/67 (55%)
Query: 696 LYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCS 755
++++ +LA+ R + IW E G+ + L GH++ V + +S + R+LAS S
Sbjct: 470 IFSHDSRLLASASDDRTVRIWDT-EKGS---HKHTLEGHSSLVTSVSFSH-DSRLLASAS 524
Query: 756 VDRSNRI 762
D++ RI
Sbjct: 525 NDQTVRI 531
Score = 59 (25.8 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 20/67 (29%), Positives = 35/67 (52%)
Query: 696 LYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCS 755
++++ +LA+ + IW + G + Q L GH + V + +S + R+LAS S
Sbjct: 428 IFSHDSQLLASASDDSTVKIW---DTGTGSL-QHTLEGHRDWVRSVIFSH-DSRLLASAS 482
Query: 756 VDRSNRI 762
DR+ RI
Sbjct: 483 DDRTVRI 489
>UNIPROTKB|H3BT67 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000569627 Bgee:H3BT67 Uniprot:H3BT67
Length = 117
Score = 139 (54.0 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 32/93 (34%), Positives = 48/93 (51%)
Query: 307 AWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHT 366
AW++ + +V H ++V L R+LA+ D + +W IN +C+++L HT
Sbjct: 10 AWKLQE--IVAHASNVSSLVLGKASGRLLATGGDDCRVNLWS---INKPNCIMSL-TGHT 63
Query: 367 SDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFK 399
S V + N E LIV+G G I VWDL K
Sbjct: 64 SPVESVRLNTPEELIVAGSQSGSIRVWDLEAAK 96
>GENEDB_PFALCIPARUM|PFL2460w [details] [associations]
symbol:PFL2460w "coronin" species:5833
"Plasmodium falciparum" [GO:0006928 "cellular component movement"
evidence=ISS] [GO:0000910 "cytokinesis" evidence=ISS] [GO:0007017
"microtubule-based process" evidence=ISS] [GO:0003779 "actin
binding" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0003779 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006928 GO:GO:0000910
EMBL:AE014188 GO:GO:0007017 InterPro:IPR015505 InterPro:IPR015048
InterPro:IPR015049 PANTHER:PTHR10856 Pfam:PF08953 Pfam:PF08954
RefSeq:XP_001350896.1 ProteinModelPortal:Q8I4S2 PRIDE:Q8I4S2
EnsemblProtists:PFL2460w:mRNA GeneID:811544 KEGG:pfa:PFL2460w
EuPathDB:PlasmoDB:PF3D7_1251200 OMA:CEDVEIC ProtClustDB:PTZ00420
Uniprot:Q8I4S2
Length = 602
Score = 163 (62.4 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 36/104 (34%), Positives = 55/104 (52%)
Query: 309 QVDQKPLV---GHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRV----INTKSCMLTL 361
QV P++ HT+ + DL ++P +LASCS D+SIRIW+ R +N L +
Sbjct: 61 QVRNPPVIKLKSHTSPILDLSFNPCYSEILASCSEDMSIRIWEIRHEDENVNEVKDPLCI 120
Query: 362 PNAHTSDVNVISWNRTEPLIVSGGD-DGCIHVWDLRRFKKGSSV 404
N H VN++SWN I+S D +++WD+ KK +
Sbjct: 121 LNGHKKKVNILSWNPMNYFILSSTSFDSSVNIWDIENEKKAFEI 164
>UNIPROTKB|Q8I4S2 [details] [associations]
symbol:PFL2460w "Coronin" species:36329 "Plasmodium
falciparum 3D7" [GO:0000910 "cytokinesis" evidence=ISS] [GO:0003779
"actin binding" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0006928 "cellular component movement"
evidence=ISS] [GO:0007017 "microtubule-based process" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0003779 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006928 GO:GO:0000910 EMBL:AE014188
GO:GO:0007017 InterPro:IPR015505 InterPro:IPR015048
InterPro:IPR015049 PANTHER:PTHR10856 Pfam:PF08953 Pfam:PF08954
RefSeq:XP_001350896.1 ProteinModelPortal:Q8I4S2 PRIDE:Q8I4S2
EnsemblProtists:PFL2460w:mRNA GeneID:811544 KEGG:pfa:PFL2460w
EuPathDB:PlasmoDB:PF3D7_1251200 OMA:CEDVEIC ProtClustDB:PTZ00420
Uniprot:Q8I4S2
Length = 602
Score = 163 (62.4 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 36/104 (34%), Positives = 55/104 (52%)
Query: 309 QVDQKPLV---GHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRV----INTKSCMLTL 361
QV P++ HT+ + DL ++P +LASCS D+SIRIW+ R +N L +
Sbjct: 61 QVRNPPVIKLKSHTSPILDLSFNPCYSEILASCSEDMSIRIWEIRHEDENVNEVKDPLCI 120
Query: 362 PNAHTSDVNVISWNRTEPLIVSGGD-DGCIHVWDLRRFKKGSSV 404
N H VN++SWN I+S D +++WD+ KK +
Sbjct: 121 LNGHKKKVNILSWNPMNYFILSSTSFDSSVNIWDIENEKKAFEI 164
WARNING: HSPs involving 791 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.135 0.436 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 812 757 0.00091 121 3 11 22 0.40 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1041
No. of states in DFA: 629 (67 KB)
Total size of DFA: 457 KB (2208 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 61.77u 0.12s 61.89t Elapsed: 00:00:25
Total cpu time: 61.93u 0.13s 62.06t Elapsed: 00:00:27
Start: Thu Aug 15 13:51:14 2013 End: Thu Aug 15 13:51:41 2013
WARNINGS ISSUED: 2