Query psy4512
Match_columns 101
No_of_seqs 215 out of 1122
Neff 7.5
Searched_HMMs 29240
Date Fri Aug 16 19:05:53 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4512.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/4512hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1txo_A Putative bacterial enzy 99.7 1.2E-17 4.2E-22 116.7 6.8 69 2-100 168-236 (237)
2 2i44_A Serine-threonine phosph 99.7 4.6E-17 1.6E-21 119.1 7.2 73 3-100 246-321 (324)
3 2pk0_A Serine/threonine protei 99.7 4.1E-17 1.4E-21 114.9 6.4 70 2-100 177-246 (250)
4 2jfr_A Ser-Thr phosphatase MSP 99.7 7.8E-17 2.7E-21 112.5 7.6 68 2-99 166-233 (234)
5 2p8e_A PPM1B beta isoform vari 99.7 5.5E-17 1.9E-21 118.3 6.8 73 3-100 225-298 (307)
6 3kdj_B Protein phosphatase 2C 99.7 6.3E-17 2.1E-21 118.4 5.9 75 3-100 209-305 (316)
7 2j82_A TPPHA, protein serine-t 99.7 1E-16 3.4E-21 112.1 6.3 67 3-99 174-240 (240)
8 2iq1_A Protein phosphatase 2C 99.7 8.3E-17 2.8E-21 115.5 5.9 69 3-100 192-262 (274)
9 3qn1_B Protein phosphatase 2C 99.7 1E-16 3.5E-21 118.5 6.1 75 3-100 238-328 (337)
10 3d8k_A PP2C, protein phosphata 99.6 2.5E-16 8.4E-21 118.5 6.8 74 3-100 251-324 (377)
11 4da1_A Protein phosphatase 1K, 99.6 5.2E-16 1.8E-20 116.8 6.7 70 2-100 305-376 (389)
12 2i0o_A Ser/Thr phosphatase; be 99.6 4.6E-16 1.6E-20 113.2 5.9 80 3-100 224-304 (304)
13 1a6q_A Phosphatase 2C; catalyt 99.6 1.8E-15 6.2E-20 113.9 6.3 73 3-100 218-292 (382)
14 2isn_A NYSGXRC-8828Z, phosphat 99.6 3.5E-15 1.2E-19 111.7 6.3 74 3-100 258-333 (364)
15 3rnr_A Stage II sporulation E 99.5 5.6E-16 1.9E-20 107.6 0.4 65 3-99 144-211 (211)
16 2pnq_A [pyruvate dehydrogenase 99.5 7.6E-15 2.6E-19 113.1 6.1 94 3-100 327-455 (467)
17 2j4o_A Mitogen-activated prote 99.5 2.2E-15 7.6E-20 113.9 3.0 86 3-100 269-366 (401)
18 2irm_A Mitogen-activated prote 99.5 6.6E-15 2.2E-19 109.6 3.4 88 3-100 255-356 (358)
19 3t91_A Stage II sporulation pr 99.4 5.1E-13 1.7E-17 93.7 7.6 74 3-100 142-220 (242)
20 3zt9_A Serine phosphatase; hyd 99.3 2.7E-12 9.2E-17 88.0 4.9 63 3-98 131-193 (193)
21 3pu9_A Protein serine/threonin 99.3 6.3E-12 2.2E-16 88.8 6.7 73 3-100 145-224 (242)
22 3f79_A Probable two-component 99.3 6.5E-12 2.2E-16 88.7 5.5 69 3-100 178-253 (255)
23 3ke6_A Protein RV1364C/MT1410; 98.8 4.6E-08 1.6E-12 73.5 10.0 79 4-100 170-257 (399)
24 3eq2_A Probable two-component 98.2 6E-07 2.1E-11 66.4 2.9 25 4-28 318-342 (394)
25 3c4z_A Rhodopsin kinase; Ser/T 59.3 0.36 1.2E-05 37.4 -4.2 55 3-61 55-115 (543)
26 2eqj_A Metal-response element- 54.0 7.9 0.00027 22.0 2.0 19 7-25 10-29 (66)
27 2e5q_A PHD finger protein 19; 51.1 8.4 0.00029 21.6 1.8 19 8-26 5-24 (63)
28 4hcz_A PHD finger protein 1; p 49.6 6.7 0.00023 21.7 1.2 17 9-25 2-19 (58)
29 1x9a_A Hypothetical protein TM 48.3 6.9 0.00024 24.0 1.2 20 11-30 42-61 (107)
30 2m0o_A PHD finger protein 1; t 45.3 11 0.00037 22.1 1.7 18 9-26 25-43 (79)
31 2d1p_C TUSB, hypothetical prot 43.5 7.4 0.00025 23.0 0.8 28 11-38 21-48 (95)
32 1dhn_A DHNA, 7,8-dihydroneopte 38.6 57 0.002 19.8 4.5 42 21-62 45-86 (121)
33 1rhx_A Conserved hypothetical 37.9 4.5 0.00015 23.7 -0.8 20 11-30 22-41 (87)
34 1wi4_A Synip, syntaxin binding 37.2 47 0.0016 19.5 3.8 30 10-40 59-89 (109)
35 1uhe_A Aspartate 1-decarboxyla 36.8 19 0.00064 21.9 1.8 22 10-34 52-73 (97)
36 3e17_A Tight junction protein 36.5 40 0.0014 18.9 3.3 30 10-40 39-69 (88)
37 1vc3_B L-aspartate-alpha-decar 35.7 20 0.00068 21.8 1.8 17 10-26 54-70 (96)
38 3soe_A Membrane-associated gua 35.6 39 0.0013 20.6 3.3 32 9-40 48-79 (113)
39 3plx_B Aspartate 1-decarboxyla 33.4 23 0.00077 21.8 1.8 22 10-34 53-74 (102)
40 2xsk_A CSGC; chaperone; 1.70A 32.9 27 0.00093 21.5 2.1 22 3-24 63-87 (110)
41 1ujv_A Membrane associated gua 32.7 50 0.0017 18.9 3.3 30 9-39 46-76 (96)
42 1nbu_A DHNA, probable dihydron 32.6 58 0.002 19.7 3.8 42 21-62 45-86 (119)
43 3cbz_A Dishevelled-2; PDZ doma 32.3 51 0.0017 19.2 3.4 30 10-40 51-81 (108)
44 3cqb_A Probable protease HTPX 31.6 9.5 0.00033 23.0 -0.1 25 15-39 65-89 (107)
45 2q9v_A Membrane-associated gua 30.9 58 0.002 18.0 3.4 28 11-39 46-74 (90)
46 2d92_A INAD-like protein; PDZ 30.8 77 0.0026 18.3 4.0 29 10-39 62-91 (108)
47 1uep_A Membrane associated gua 30.6 57 0.002 18.7 3.4 29 10-39 52-81 (103)
48 3jxo_A TRKA-N domain protein; 30.5 27 0.00092 19.4 1.8 14 8-21 58-71 (86)
49 2ejy_A 55 kDa erythrocyte memb 30.1 73 0.0025 18.5 3.8 28 11-39 55-83 (97)
50 1sql_A Dihydroneopterin aldola 29.5 94 0.0032 19.7 4.5 42 21-62 64-105 (146)
51 2dlu_A INAD-like protein; PDZ 29.0 87 0.003 18.1 4.2 28 11-39 57-85 (111)
52 3oug_A Aspartate 1-decarboxyla 28.7 30 0.001 21.6 1.8 17 10-26 81-97 (114)
53 1wfg_A Regulating synaptic mem 28.6 58 0.002 19.8 3.3 30 10-40 83-113 (131)
54 2jil_A GRIP1 protein, glutamat 28.6 64 0.0022 18.1 3.3 28 11-39 51-79 (97)
55 1v1c_A Obscurin; muscle, sarco 28.4 25 0.00086 20.1 1.4 17 1-17 16-32 (71)
56 2dmz_A INAD-like protein; PDZ 27.9 78 0.0027 18.9 3.8 28 11-39 65-93 (129)
57 2o90_A DHNA, dihydroneopterin 27.6 87 0.003 19.0 3.9 42 21-62 44-85 (122)
58 1b9l_A Protein (epimerase); is 27.4 1.1E+02 0.0036 18.5 5.7 41 21-61 48-88 (120)
59 1ypr_A Profilin; actin-binding 27.3 98 0.0034 19.0 4.2 26 13-40 24-49 (125)
60 2db5_A INAD-like protein; PDZ 27.0 79 0.0027 18.9 3.7 29 10-39 72-102 (128)
61 3o46_A Maguk P55 subfamily mem 26.5 73 0.0025 17.7 3.3 29 10-39 46-75 (93)
62 2ego_A General receptor for ph 26.4 76 0.0026 17.8 3.4 28 11-39 55-83 (96)
63 1pqh_A Aspartate 1-decarboxyla 25.8 35 0.0012 22.1 1.8 17 10-26 95-111 (143)
64 1kwa_A Hcask/LIN-2 protein; PD 25.5 58 0.002 18.2 2.7 29 10-39 43-72 (88)
65 3jx9_A Putative phosphoheptose 25.5 34 0.0012 22.5 1.8 13 10-22 74-86 (170)
66 3gt2_A Putative uncharacterize 25.3 26 0.0009 22.0 1.2 15 10-24 89-103 (142)
67 1uew_A Membrane associated gua 25.2 96 0.0033 18.0 3.8 30 9-39 60-90 (114)
68 2qg1_A Multiple PDZ domain pro 25.0 82 0.0028 17.4 3.3 27 11-38 48-75 (92)
69 1wie_A RIM binding protein 2; 24.7 53 0.0018 19.0 2.4 15 6-20 37-51 (96)
70 1v5q_A GRIP1 homolog, glutamat 24.7 66 0.0023 19.1 3.0 29 11-40 64-93 (122)
71 3r2e_A Dihydroneopterin aldola 24.7 1.1E+02 0.0036 19.4 4.0 42 21-62 68-109 (143)
72 2k1g_A Lipoprotein SPR; soluti 24.6 30 0.001 21.9 1.3 15 9-23 66-80 (135)
73 2if6_A Hypothetical protein YI 24.6 34 0.0012 22.3 1.7 15 9-23 3-17 (186)
74 2c45_A Aspartate 1-decarboxyla 24.5 39 0.0013 21.8 1.8 21 10-33 78-98 (139)
75 1ueq_A Membrane associated gua 24.5 66 0.0022 19.2 2.9 28 11-39 63-91 (123)
76 1ihj_A INAD; intermolecular di 24.4 81 0.0028 17.6 3.2 28 11-39 56-84 (98)
77 2pa1_A PDZ and LIM domain prot 24.2 78 0.0027 17.3 3.1 28 11-39 44-72 (87)
78 2jxo_A Ezrin-radixin-moesin-bi 24.1 75 0.0026 17.8 3.0 28 11-39 51-79 (98)
79 3nfk_A Tyrosine-protein phosph 23.9 79 0.0027 18.1 3.1 28 11-39 63-91 (107)
80 1wi2_A Riken cDNA 2700099C19; 23.9 88 0.003 17.9 3.4 28 11-39 59-87 (104)
81 2i04_A Membrane-associated gua 23.8 77 0.0026 17.2 3.0 28 11-39 44-72 (85)
82 3p42_A Predicted protein; beta 23.8 69 0.0024 22.0 3.2 32 8-39 189-224 (236)
83 1g9o_A NHE-RF; PDZ domain, com 23.1 82 0.0028 17.3 3.0 28 11-39 45-73 (91)
84 3l4f_D SH3 and multiple ankyri 23.0 1.2E+02 0.0042 18.3 4.1 28 11-39 83-111 (132)
85 1wg6_A Hypothetical protein (r 23.0 71 0.0024 19.3 2.9 29 10-39 73-102 (127)
86 2csj_A TJP2 protein; PDZ domai 22.9 1.2E+02 0.0042 17.6 4.0 29 10-39 62-91 (117)
87 1wha_A KIAA0147 protein, scrib 22.8 92 0.0031 17.8 3.3 27 11-38 57-84 (105)
88 2cs5_A Tyrosine-protein phosph 22.7 1.2E+02 0.0042 17.6 4.2 29 10-39 60-89 (119)
89 2rcz_A Tight junction protein 22.7 82 0.0028 16.7 2.9 27 11-38 40-67 (81)
90 2iwq_A Multiple PDZ domain pro 22.3 91 0.0031 18.7 3.3 28 11-39 78-106 (123)
91 4aey_A D-erythro-7,8-dihydrone 22.3 1.5E+02 0.0052 19.0 4.5 42 20-61 83-124 (156)
92 2byg_A Channel associated prot 22.2 87 0.003 18.5 3.1 27 11-38 73-100 (117)
93 2kpk_A Membrane-associated gua 22.2 86 0.003 18.8 3.2 29 11-40 62-91 (129)
94 2vsp_A PDZ domain-containing p 22.1 66 0.0023 17.9 2.5 28 11-39 45-73 (91)
95 1n3y_A Integrin alpha-X; alpha 21.9 1.1E+02 0.0039 19.0 3.9 24 16-39 113-138 (198)
96 2yt7_A Amyloid beta A4 precurs 21.8 1.2E+02 0.0041 17.2 4.0 29 10-39 55-84 (101)
97 2he4_A Na(+)/H(+) exchange reg 21.8 68 0.0023 17.7 2.5 27 11-38 46-73 (90)
98 1n7e_A AMPA receptor interacti 21.6 96 0.0033 17.4 3.1 27 11-38 49-76 (97)
99 2la8_A Inactivation-NO-after-p 21.4 1.2E+02 0.004 17.6 3.6 28 10-38 43-71 (106)
100 1vb7_A PDZ and LIM domain 2; P 21.0 95 0.0032 17.3 3.0 28 11-39 48-76 (94)
101 3o1k_A Dihydroneopterin aldola 21.0 96 0.0033 19.2 3.2 42 21-62 59-100 (132)
102 2fcf_A Multiple PDZ domain pro 21.0 94 0.0032 17.5 3.0 28 11-39 58-86 (103)
103 3v9o_A Dihydroneopterin aldola 20.9 1.6E+02 0.0056 18.4 6.2 40 22-61 67-106 (143)
104 1jo0_A Hypothetical protein HI 20.8 1.1E+02 0.0038 18.2 3.3 44 16-60 21-70 (98)
105 2iwn_A Multiple PDZ domain pro 20.7 1E+02 0.0034 17.0 3.1 13 11-24 52-64 (97)
106 1v6b_A Harmonin isoform A1; st 20.6 1.4E+02 0.0048 17.5 4.0 28 10-38 61-89 (118)
107 2jyx_A Lipoprotein SPR; soluti 20.6 37 0.0013 21.1 1.2 14 10-23 67-80 (136)
108 3qe1_A Sorting nexin-27, G pro 20.6 1.1E+02 0.0039 17.4 3.4 28 11-39 61-89 (107)
109 1r6j_A Syntenin 1; PDZ, membra 20.5 91 0.0031 17.6 2.8 28 11-39 41-69 (82)
110 1dgw_Y Canavalin; duplicated s 20.4 65 0.0022 19.1 2.2 13 6-18 5-17 (93)
111 1mhn_A SurviVal motor neuron p 20.4 55 0.0019 17.3 1.8 17 10-26 3-21 (59)
112 2f5y_A Regulator of G-protein 20.3 1E+02 0.0035 17.1 3.0 27 11-38 42-69 (91)
113 1y7n_A Amyloid beta A4 precurs 20.3 1.2E+02 0.004 17.1 3.3 28 11-39 49-77 (90)
114 1shu_X Anthrax toxin receptor 20.2 1E+02 0.0035 19.0 3.3 13 15-27 105-117 (182)
No 1
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A
Probab=99.71 E-value=1.2e-17 Score=116.75 Aligned_cols=69 Identities=29% Similarity=0.399 Sum_probs=61.1
Q ss_pred CCccceeEeccCCCEEEEeecCCCCCCChHHHHHHHHHhhCCCCchhHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHcC
Q psy4512 2 ECADTSQFQVEDGDVILLATDGVFDNVPDSLLLAELVRAQGSKDPMQLQLVANTIALMARTLAFDETYMSPFAIQARANG 81 (101)
Q Consensus 2 ~~~d~~~~~l~~gD~lvl~SDGl~d~l~~~ei~~~l~~~~~~~~~~~~~~~a~~Lv~~A~~~~~d~~~~~p~~~~a~~~~ 81 (101)
.++++.++++++||+||||||||||+++++++.++++. .+|+.+|+.|++.|+.
T Consensus 168 ~~p~~~~~~l~~~d~lvl~SDGl~d~l~~~~i~~~~~~-------~~~~~~a~~L~~~a~~------------------- 221 (237)
T 1txo_A 168 VEPTLTMREARAGDRYLLCSDGLSDPVSDETILEALQI-------PEVAESAHRLIELALR------------------- 221 (237)
T ss_dssp CCCEEEEEECCTTCEEEEECHHHHTTSCHHHHHHHHTS-------SSHHHHHHHHHHHHHH-------------------
T ss_pred ccceEEEEecCCCCEEEEECCCCCCCCCHHHHHHHHhc-------CCHHHHHHHHHHHHHH-------------------
Confidence 46788899999999999999999999999999998853 4799999999999983
Q ss_pred CCCCCCCCCceEEEEEEEe
Q psy4512 82 ISTQGGKPDDITVLLAIVA 100 (101)
Q Consensus 82 ~~~~gg~~DdiTvvvv~v~ 100 (101)
+|+.|||||+|+++.
T Consensus 222 ----~g~~DniTvivv~~~ 236 (237)
T 1txo_A 222 ----GGGPDNVTVVVADLE 236 (237)
T ss_dssp ----TTCCSCEEEEEEEEE
T ss_pred ----cCCCCCeEEEEEEee
Confidence 445899999999985
No 2
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii}
Probab=99.68 E-value=4.6e-17 Score=119.05 Aligned_cols=73 Identities=22% Similarity=0.289 Sum_probs=62.6
Q ss_pred CccceeEeccCCC-EEEEeecCCCCCCChHHHHHHHHHhhCCCCchhHHH--HHHHHHHHHHHHhcCCCCCCHHHHHHHH
Q psy4512 3 CADTSQFQVEDGD-VILLATDGVFDNVPDSLLLAELVRAQGSKDPMQLQL--VANTIALMARTLAFDETYMSPFAIQARA 79 (101)
Q Consensus 3 ~~d~~~~~l~~gD-~lvl~SDGl~d~l~~~ei~~~l~~~~~~~~~~~~~~--~a~~Lv~~A~~~~~d~~~~~p~~~~a~~ 79 (101)
+|++..++|++|| +||||||||||+++++++.+++..... ...+++. +|+.|++.|+
T Consensus 246 ~pdv~~~~l~~~d~~llLaSDGl~d~ls~~ei~~~v~~~~~--~~~~~~~~~~a~~L~~~A~------------------ 305 (324)
T 2i44_A 246 QPDVRVVRVTPQHRVMILATDGLWDVMSAAQAVEIAMQARQ--EGRNPAQALVEMTLAEQQS------------------ 305 (324)
T ss_dssp CCEEEEEECCTTEEEEEEECHHHHTTCCHHHHHHHHHHHHH--TTCCHHHHHHHHHHHHHHH------------------
T ss_pred cCEEEEEEcCCCCeEEEEEcCchhccCCHHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHH------------------
Confidence 6889999999999 799999999999999999999986520 1246888 9999999998
Q ss_pred cCCCCCCCCCCceEEEEEEEe
Q psy4512 80 NGISTQGGKPDDITVLLAIVA 100 (101)
Q Consensus 80 ~~~~~~gg~~DdiTvvvv~v~ 100 (101)
.+|..|||||+|+++.
T Consensus 306 -----~~g~~DNiTvivv~~~ 321 (324)
T 2i44_A 306 -----RNQSADNITAMTVFFK 321 (324)
T ss_dssp -----TTCCCCCEEEEEEEEC
T ss_pred -----hcCCCCCCEEEEEEee
Confidence 3556999999999975
No 3
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae}
Probab=99.68 E-value=4.1e-17 Score=114.88 Aligned_cols=70 Identities=23% Similarity=0.329 Sum_probs=61.5
Q ss_pred CCccceeEeccCCCEEEEeecCCCCCCChHHHHHHHHHhhCCCCchhHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHcC
Q psy4512 2 ECADTSQFQVEDGDVILLATDGVFDNVPDSLLLAELVRAQGSKDPMQLQLVANTIALMARTLAFDETYMSPFAIQARANG 81 (101)
Q Consensus 2 ~~~d~~~~~l~~gD~lvl~SDGl~d~l~~~ei~~~l~~~~~~~~~~~~~~~a~~Lv~~A~~~~~d~~~~~p~~~~a~~~~ 81 (101)
.++++.+++|++||+||||||||||+++++++.++++.. .+++.+|+.|++.|+.
T Consensus 177 ~~p~~~~~~l~~gd~lll~SDGl~d~l~~~~i~~~~~~~------~~~~~~a~~L~~~a~~------------------- 231 (250)
T 2pk0_A 177 VEPDLGVHLLEEGDYLVVNSDGLTNMLSNADIATVLTQE------KTLDDKNQDLITLANH------------------- 231 (250)
T ss_dssp CCCEEEEEECCTTCEEEEECHHHHTTSCHHHHHHHHTSS------SCHHHHHHHHHHHHHH-------------------
T ss_pred ccceEEEEEcCCCCEEEEECCCCCCCcCHHHHHHHHhcC------CCHHHHHHHHHHHHHH-------------------
Confidence 367888999999999999999999999999999888753 5799999999999983
Q ss_pred CCCCCCCCCceEEEEEEEe
Q psy4512 82 ISTQGGKPDDITVLLAIVA 100 (101)
Q Consensus 82 ~~~~gg~~DdiTvvvv~v~ 100 (101)
.|..|||||+|+++.
T Consensus 232 ----~g~~DniTvivv~~~ 246 (250)
T 2pk0_A 232 ----RGGLDNITVALVYVE 246 (250)
T ss_dssp ----TTCCSCEEEEEEEEC
T ss_pred ----cCCCCCeEEEEEEee
Confidence 345899999999875
No 4
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A
Probab=99.68 E-value=7.8e-17 Score=112.47 Aligned_cols=68 Identities=21% Similarity=0.364 Sum_probs=60.2
Q ss_pred CCccceeEeccCCCEEEEeecCCCCCCChHHHHHHHHHhhCCCCchhHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHcC
Q psy4512 2 ECADTSQFQVEDGDVILLATDGVFDNVPDSLLLAELVRAQGSKDPMQLQLVANTIALMARTLAFDETYMSPFAIQARANG 81 (101)
Q Consensus 2 ~~~d~~~~~l~~gD~lvl~SDGl~d~l~~~ei~~~l~~~~~~~~~~~~~~~a~~Lv~~A~~~~~d~~~~~p~~~~a~~~~ 81 (101)
.++++.++++++||+||||||||||+++++++.+++ .. .+++.+|+.|++.|+.
T Consensus 166 ~~~~~~~~~l~~gd~lll~SDGl~d~~~~~~i~~~~-~~------~~~~~~a~~l~~~a~~------------------- 219 (234)
T 2jfr_A 166 IGPDVFGIDCGPGDRLLISSDGLFAAADEALIVDAA-TS------PDPQVAVRRLVEVAND------------------- 219 (234)
T ss_dssp CCCEEEECCCCTTCEEEEECGGGGTTSCHHHHHHHH-TC------SSHHHHHHHHHHHHHH-------------------
T ss_pred ceeEEEEEecCCCCEEEEECCCCccccCHHHHHHHH-cc------CCHHHHHHHHHHHHHH-------------------
Confidence 367888999999999999999999999999999998 42 5799999999999983
Q ss_pred CCCCCCCCCceEEEEEEE
Q psy4512 82 ISTQGGKPDDITVLLAIV 99 (101)
Q Consensus 82 ~~~~gg~~DdiTvvvv~v 99 (101)
+|..|||||+++++
T Consensus 220 ----~g~~DniTvivv~~ 233 (234)
T 2jfr_A 220 ----AGGSDNTTVVVIDL 233 (234)
T ss_dssp ----TTCCSCEEEEEEEE
T ss_pred ----cCCCCCeEEEEEEe
Confidence 34589999999986
No 5
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens}
Probab=99.68 E-value=5.5e-17 Score=118.34 Aligned_cols=73 Identities=19% Similarity=0.271 Sum_probs=61.6
Q ss_pred CccceeEeccCCC-EEEEeecCCCCCCChHHHHHHHHHhhCCCCchhHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHcC
Q psy4512 3 CADTSQFQVEDGD-VILLATDGVFDNVPDSLLLAELVRAQGSKDPMQLQLVANTIALMARTLAFDETYMSPFAIQARANG 81 (101)
Q Consensus 3 ~~d~~~~~l~~gD-~lvl~SDGl~d~l~~~ei~~~l~~~~~~~~~~~~~~~a~~Lv~~A~~~~~d~~~~~p~~~~a~~~~ 81 (101)
+|++..+++++|| +||||||||||++++++|.++++.... ...+++.+|+.|++.|+.
T Consensus 225 ~pdv~~~~l~~~d~~llL~SDGl~d~ls~~ei~~~v~~~~~--~~~~~~~~a~~Lv~~A~~------------------- 283 (307)
T 2p8e_A 225 EPEVYEILRAEEDEFIILACDGIWDVMSNEELCEYVKSRLE--VSDDLENVCNWVVDTCLH------------------- 283 (307)
T ss_dssp CCEEEEEECCTTEEEEEEECHHHHTTSCHHHHHHHHHHHHT--TCCCHHHHHHHHHHHHHH-------------------
T ss_pred cCeEEEEEcCCCCeEEEEECCCcccCCCHHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHH-------------------
Confidence 6788899999998 589999999999999999999987431 125799999999999982
Q ss_pred CCCCCCCCCceEEEEEEEe
Q psy4512 82 ISTQGGKPDDITVLLAIVA 100 (101)
Q Consensus 82 ~~~~gg~~DdiTvvvv~v~ 100 (101)
+|..|||||+|+++.
T Consensus 284 ----~g~~DNiTvivv~~~ 298 (307)
T 2p8e_A 284 ----KGSRDNMSIVLVCFS 298 (307)
T ss_dssp ----TTCCSCEEEEEEEC-
T ss_pred ----cCCCCCeEEEEEECC
Confidence 445999999999874
No 6
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B*
Probab=99.67 E-value=6.3e-17 Score=118.44 Aligned_cols=75 Identities=21% Similarity=0.300 Sum_probs=61.0
Q ss_pred CccceeEe-ccCCCEEEEeecCCCCCCChHHHHHHHHHhh---------------------CCCCchhHHHHHHHHHHHH
Q psy4512 3 CADTSQFQ-VEDGDVILLATDGVFDNVPDSLLLAELVRAQ---------------------GSKDPMQLQLVANTIALMA 60 (101)
Q Consensus 3 ~~d~~~~~-l~~gD~lvl~SDGl~d~l~~~ei~~~l~~~~---------------------~~~~~~~~~~~a~~Lv~~A 60 (101)
+|++..+. +++||+||||||||||++++++|.++++... ......+++.+|+.|++.|
T Consensus 209 ~pdv~~~~~~~~~d~llL~SDGl~d~l~~~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~Lv~~A 288 (316)
T 3kdj_B 209 DPEVTAVKRVKEDDCLILASDGVWDVMTDEEACEMARKRILLWHKKNAVAGGASLLADERRKEGKDPAAMSAAEYLSKLA 288 (316)
T ss_dssp CCEEEEEECCTTEEEEEEECHHHHTSSCHHHHHHHHHHHHHHHTTC-----------------CCCHHHHHHHHHHHHHH
T ss_pred CCceEEEEecCCCCEEEEEccCcccCCCHHHHHHHHHHHhhhhccccccccccccccccccccccCchHHHHHHHHHHHH
Confidence 56777777 8899999999999999999999999997621 0011357899999999999
Q ss_pred HHHhcCCCCCCHHHHHHHHcCCCCCCCCCCceEEEEEEEe
Q psy4512 61 RTLAFDETYMSPFAIQARANGISTQGGKPDDITVLLAIVA 100 (101)
Q Consensus 61 ~~~~~d~~~~~p~~~~a~~~~~~~~gg~~DdiTvvvv~v~ 100 (101)
+ .+|+.|||||+|+++.
T Consensus 289 ~-----------------------~~g~~DNiTvivv~l~ 305 (316)
T 3kdj_B 289 I-----------------------QRGSKDNISVVVVDLK 305 (316)
T ss_dssp H-----------------------HTTCCSCEEEEEEECS
T ss_pred H-----------------------HcCCCCCeEEEEEEcc
Confidence 8 3456999999999875
No 7
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A
Probab=99.66 E-value=1e-16 Score=112.14 Aligned_cols=67 Identities=28% Similarity=0.442 Sum_probs=59.4
Q ss_pred CccceeEeccCCCEEEEeecCCCCCCChHHHHHHHHHhhCCCCchhHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHcCC
Q psy4512 3 CADTSQFQVEDGDVILLATDGVFDNVPDSLLLAELVRAQGSKDPMQLQLVANTIALMARTLAFDETYMSPFAIQARANGI 82 (101)
Q Consensus 3 ~~d~~~~~l~~gD~lvl~SDGl~d~l~~~ei~~~l~~~~~~~~~~~~~~~a~~Lv~~A~~~~~d~~~~~p~~~~a~~~~~ 82 (101)
++++.+++|++||+||||||||||+++++++.++++ . .+++.+|+.|++.|+.
T Consensus 174 ~p~~~~~~l~~gd~lll~SDGl~d~l~~~~i~~~l~-~------~~~~~~a~~l~~~a~~-------------------- 226 (240)
T 2j82_A 174 QIDIQPIDLEPGDRLLLCSDGLTEELTDDVISIYLS-E------PNVQKAAAALVDAAKT-------------------- 226 (240)
T ss_dssp CCEEEEEECCTTCEEEEECHHHHTTSCHHHHHHHHT-C------SSHHHHHHHHHHHHHH--------------------
T ss_pred eEEEEEEeeCCCCEEEEECCCCCCCCCHHHHHHHHc-c------CCHHHHHHHHHHHHHH--------------------
Confidence 678889999999999999999999999999999887 2 5799999999999983
Q ss_pred CCCCCCCCceEEEEEEE
Q psy4512 83 STQGGKPDDITVLLAIV 99 (101)
Q Consensus 83 ~~~gg~~DdiTvvvv~v 99 (101)
.| ..|||||+|+++
T Consensus 227 --~g-~~DniTvivv~~ 240 (240)
T 2j82_A 227 --HG-GRDNVTVVVISV 240 (240)
T ss_dssp --TT-CCSCEEEEEEEC
T ss_pred --cC-CCCCeEEEEEeC
Confidence 34 489999999975
No 8
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens}
Probab=99.66 E-value=8.3e-17 Score=115.53 Aligned_cols=69 Identities=16% Similarity=0.179 Sum_probs=60.3
Q ss_pred CccceeEeccCC--CEEEEeecCCCCCCChHHHHHHHHHhhCCCCchhHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHc
Q psy4512 3 CADTSQFQVEDG--DVILLATDGVFDNVPDSLLLAELVRAQGSKDPMQLQLVANTIALMARTLAFDETYMSPFAIQARAN 80 (101)
Q Consensus 3 ~~d~~~~~l~~g--D~lvl~SDGl~d~l~~~ei~~~l~~~~~~~~~~~~~~~a~~Lv~~A~~~~~d~~~~~p~~~~a~~~ 80 (101)
+|++..++|++| |+||||||||||++++++|.++++.. .+|+.+|+.|++.|+.
T Consensus 192 ~pdi~~~~l~~g~d~~lll~SDGl~d~l~~~ei~~~~~~~------~~~~~~a~~L~~~A~~------------------ 247 (274)
T 2iq1_A 192 EPETKRIKLHHADDSFLVLTTDGINFMVNSQEICDFVNQC------HDPNEAAHAVTEQAIQ------------------ 247 (274)
T ss_dssp CCEEEEEECCTTTEEEEEEECHHHHTTCCHHHHHHHHHTS------SSHHHHHHHHHHHHHH------------------
T ss_pred CCEEEEEEeCCCCCcEEEEEccCcccCCCHHHHHHHHHHc------CCHHHHHHHHHHHHHH------------------
Confidence 678889999987 48899999999999999999998763 5799999999999983
Q ss_pred CCCCCCCCCCceEEEEEEEe
Q psy4512 81 GISTQGGKPDDITVLLAIVA 100 (101)
Q Consensus 81 ~~~~~gg~~DdiTvvvv~v~ 100 (101)
+|..|||||+|+++.
T Consensus 248 -----~g~~DNiTvivv~~~ 262 (274)
T 2iq1_A 248 -----YGTEDNSTAVVVPFG 262 (274)
T ss_dssp -----TTCCSCEEEEEEECT
T ss_pred -----cCCCCCeEEEEEEcc
Confidence 345999999999874
No 9
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B*
Probab=99.66 E-value=1e-16 Score=118.52 Aligned_cols=75 Identities=17% Similarity=0.298 Sum_probs=61.1
Q ss_pred CccceeEec-cCCCEEEEeecCCCCCCChHHHHHHHHHhh---------------CCCCchhHHHHHHHHHHHHHHHhcC
Q psy4512 3 CADTSQFQV-EDGDVILLATDGVFDNVPDSLLLAELVRAQ---------------GSKDPMQLQLVANTIALMARTLAFD 66 (101)
Q Consensus 3 ~~d~~~~~l-~~gD~lvl~SDGl~d~l~~~ei~~~l~~~~---------------~~~~~~~~~~~a~~Lv~~A~~~~~d 66 (101)
++++..+.+ ++||+||||||||||++++++|.++++... +.....+++.+|+.|++.|+.
T Consensus 238 ~pdv~~~~~~~~~d~llL~SDGl~d~l~~~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~Lv~~A~~---- 313 (337)
T 3qn1_B 238 EPEVTFMPRSREDECLILASDGLWDVMNNQEVCEIARRRILMWHKKNGAPPLAERGKGIDPACQAAADYLSMLALQ---- 313 (337)
T ss_dssp CCEEEEEECCTTEEEEEEECHHHHTTSCHHHHHHHHHHHHHHHHHHHCCC----CCSSCCHHHHHHHHHHHHHHHH----
T ss_pred cceEEEEEeCCCCCEEEEEecCcccCCCHHHHHHHHHHHhhhhccccccccccccccccChhHHHHHHHHHHHHHH----
Confidence 577888887 679999999999999999999999997621 000135789999999999983
Q ss_pred CCCCCHHHHHHHHcCCCCCCCCCCceEEEEEEEe
Q psy4512 67 ETYMSPFAIQARANGISTQGGKPDDITVLLAIVA 100 (101)
Q Consensus 67 ~~~~~p~~~~a~~~~~~~~gg~~DdiTvvvv~v~ 100 (101)
+|+.|||||+|+++.
T Consensus 314 -------------------~g~~DNiTvivv~l~ 328 (337)
T 3qn1_B 314 -------------------KGSKDNISIIVIDLK 328 (337)
T ss_dssp -------------------TTCCSCEEEEEEECC
T ss_pred -------------------cCCCCCEEEEEEEec
Confidence 455999999999875
No 10
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii}
Probab=99.64 E-value=2.5e-16 Score=118.50 Aligned_cols=74 Identities=18% Similarity=0.271 Sum_probs=60.8
Q ss_pred CccceeEeccCCCEEEEeecCCCCCCChHHHHHHHHHhhCCCCchhHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHcCC
Q psy4512 3 CADTSQFQVEDGDVILLATDGVFDNVPDSLLLAELVRAQGSKDPMQLQLVANTIALMARTLAFDETYMSPFAIQARANGI 82 (101)
Q Consensus 3 ~~d~~~~~l~~gD~lvl~SDGl~d~l~~~ei~~~l~~~~~~~~~~~~~~~a~~Lv~~A~~~~~d~~~~~p~~~~a~~~~~ 82 (101)
+|++..++|++||+||||||||||+++++++...+.... .....+++.+|+.|++.|+
T Consensus 251 ~Pdv~~~~l~~~D~llL~SDGl~d~ls~~e~v~~v~~~~-~~~~~~~~~~a~~Lv~~A~--------------------- 308 (377)
T 3d8k_A 251 VPDVTTFFAYPGDDIVAGTAGAFAHFRSHAAIAAAIALY-PVSPETVLDAAKAMVVNAK--------------------- 308 (377)
T ss_dssp CCEEEEEEECTTCEEEEECGGGGCSCSSHHHHHHHHTTS-CCCGGGHHHHHHHHHHTTT---------------------
T ss_pred CCcEEEEEcCCCCEEEEEECCcccCCCcHHHHHHHHHHh-hccCCCHHHHHHHHHHHHH---------------------
Confidence 688999999999999999999999999999876554321 0113689999999999997
Q ss_pred CCCCCCCCceEEEEEEEe
Q psy4512 83 STQGGKPDDITVLLAIVA 100 (101)
Q Consensus 83 ~~~gg~~DdiTvvvv~v~ 100 (101)
.+|..|||||||+++.
T Consensus 309 --~~g~~DNiTvivv~~~ 324 (377)
T 3d8k_A 309 --RRKVTKNISTFVRHLP 324 (377)
T ss_dssp --TSSCCSCCCEEEEECC
T ss_pred --hcCCCCCEEEEEEEec
Confidence 3456999999999874
No 11
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A
Probab=99.62 E-value=5.2e-16 Score=116.79 Aligned_cols=70 Identities=16% Similarity=0.175 Sum_probs=60.6
Q ss_pred CCccceeEeccC--CCEEEEeecCCCCCCChHHHHHHHHHhhCCCCchhHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHH
Q psy4512 2 ECADTSQFQVED--GDVILLATDGVFDNVPDSLLLAELVRAQGSKDPMQLQLVANTIALMARTLAFDETYMSPFAIQARA 79 (101)
Q Consensus 2 ~~~d~~~~~l~~--gD~lvl~SDGl~d~l~~~ei~~~l~~~~~~~~~~~~~~~a~~Lv~~A~~~~~d~~~~~p~~~~a~~ 79 (101)
.++++..+++++ +|+||||||||||++++++|.++++.. .+|+.+|+.|++.|+.
T Consensus 305 ~~pdi~~~~l~~~~dd~llL~SDGL~d~l~~~ei~~il~~~------~~~~~~a~~Lv~~A~~----------------- 361 (389)
T 4da1_A 305 AEPETKRIKLHHADDSFLVLTTDGINFMVNSQEICDFVNQC------HDPNEAAHAVTEQAIQ----------------- 361 (389)
T ss_dssp CCCEEEEEECCSSSCEEEEEECHHHHTTCCHHHHHHHHHHS------SSHHHHHHHHHHHHHH-----------------
T ss_pred CCCceEEEEEcCCCCcEEEEEeCCcccCCCHHHHHHHHHhc------CCHHHHHHHHHHHHHH-----------------
Confidence 367888899986 458999999999999999999999864 5799999999999983
Q ss_pred cCCCCCCCCCCceEEEEEEEe
Q psy4512 80 NGISTQGGKPDDITVLLAIVA 100 (101)
Q Consensus 80 ~~~~~~gg~~DdiTvvvv~v~ 100 (101)
+|..|||||+|+++.
T Consensus 362 ------~g~~DNiTvivv~~~ 376 (389)
T 4da1_A 362 ------YGTEDNSTAVVVPFG 376 (389)
T ss_dssp ------HTCCSCEEEEEEEEC
T ss_pred ------cCCCCCeEEEEEEec
Confidence 345899999999875
No 12
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae}
Probab=99.62 E-value=4.6e-16 Score=113.21 Aligned_cols=80 Identities=15% Similarity=0.216 Sum_probs=58.6
Q ss_pred CccceeEeccCCCE-EEEeecCCCCCCChHHHHHHHHHhhCCCCchhHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHcC
Q psy4512 3 CADTSQFQVEDGDV-ILLATDGVFDNVPDSLLLAELVRAQGSKDPMQLQLVANTIALMARTLAFDETYMSPFAIQARANG 81 (101)
Q Consensus 3 ~~d~~~~~l~~gD~-lvl~SDGl~d~l~~~ei~~~l~~~~~~~~~~~~~~~a~~Lv~~A~~~~~d~~~~~p~~~~a~~~~ 81 (101)
+|++..++|++||. ||||||||||+++++++.++++..... ...+++.+|+.|++.|+..+. .
T Consensus 224 ~pdi~~~~l~~~D~fllL~SDGl~d~l~~~ei~~~v~~~~~~-~~~~~~~~a~~L~~~a~~~~~--------------~- 287 (304)
T 2i0o_A 224 LPDIEKITVGPEDEFMVLACDGIWNFMTSEQVVQFVQERINK-PGMKLSKICEELFDHCLAPHT--------------R- 287 (304)
T ss_dssp CCEEEEEECCTTEEEEEEECHHHHTTCCHHHHHHHHHHHHTS-TTCCHHHHHHHHHHHHC--------------------
T ss_pred eCeEEEEEcCCCCeEEEEECcCccccCCHHHHHHHHHHHHhh-cCCCHHHHHHHHHHHHHHhhh--------------c-
Confidence 68889999999997 599999999999999999999875311 125799999999999973210 0
Q ss_pred CCCCCCCCCceEEEEEEEe
Q psy4512 82 ISTQGGKPDDITVLLAIVA 100 (101)
Q Consensus 82 ~~~~gg~~DdiTvvvv~v~ 100 (101)
..+|..|||||||+++.
T Consensus 288 --g~~g~~DNiTvivv~~~ 304 (304)
T 2i0o_A 288 --GDGTGCDNMTAIIVQFK 304 (304)
T ss_dssp ---------CEEEEEEEEC
T ss_pred --cCCCCCCCeEEEEEEeC
Confidence 01356899999999874
No 13
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A
Probab=99.58 E-value=1.8e-15 Score=113.88 Aligned_cols=73 Identities=19% Similarity=0.270 Sum_probs=61.0
Q ss_pred CccceeEecc-CC-CEEEEeecCCCCCCChHHHHHHHHHhhCCCCchhHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHc
Q psy4512 3 CADTSQFQVE-DG-DVILLATDGVFDNVPDSLLLAELVRAQGSKDPMQLQLVANTIALMARTLAFDETYMSPFAIQARAN 80 (101)
Q Consensus 3 ~~d~~~~~l~-~g-D~lvl~SDGl~d~l~~~ei~~~l~~~~~~~~~~~~~~~a~~Lv~~A~~~~~d~~~~~p~~~~a~~~ 80 (101)
+|++..++++ ++ |+||||||||||++++++|.++++.... ...+++.+|+.|++.|+.
T Consensus 218 ~Pdv~~~~l~~~~dd~llLaSDGlwd~ls~~ei~~~v~~~~~--~~~~~~~~a~~Lv~~A~~------------------ 277 (382)
T 1a6q_A 218 EPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLE--VTDDLEKVCNEVVDTCLY------------------ 277 (382)
T ss_dssp CCEEEEEECCTTTEEEEEEECHHHHTTSCHHHHHHHHHHHHT--TCCCHHHHHHHHHHHHHH------------------
T ss_pred eeeEEEEEccCCCCeEEEEeccCccCCCChHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHh------------------
Confidence 5788889998 75 5899999999999999999999987431 125799999999999982
Q ss_pred CCCCCCCCCCceEEEEEEEe
Q psy4512 81 GISTQGGKPDDITVLLAIVA 100 (101)
Q Consensus 81 ~~~~~gg~~DdiTvvvv~v~ 100 (101)
+|..|||||+|+++.
T Consensus 278 -----~g~~DNiTvivv~~~ 292 (382)
T 1a6q_A 278 -----KGSRDNMSVILICFP 292 (382)
T ss_dssp -----TTCCSCEEEEEEECT
T ss_pred -----cCCcCCEEEEEEEec
Confidence 345999999999874
No 14
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii}
Probab=99.56 E-value=3.5e-15 Score=111.66 Aligned_cols=74 Identities=26% Similarity=0.311 Sum_probs=59.0
Q ss_pred CccceeEeccCCCEEEEeecCCCCCCC--hHHHHHHHHHhhCCCCchhHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHc
Q psy4512 3 CADTSQFQVEDGDVILLATDGVFDNVP--DSLLLAELVRAQGSKDPMQLQLVANTIALMARTLAFDETYMSPFAIQARAN 80 (101)
Q Consensus 3 ~~d~~~~~l~~gD~lvl~SDGl~d~l~--~~ei~~~l~~~~~~~~~~~~~~~a~~Lv~~A~~~~~d~~~~~p~~~~a~~~ 80 (101)
+|++..+++++||+||||||||||+++ ++++.+++..... ....+++.+|+.|++.|+.
T Consensus 258 ~Pdv~~~~l~~~D~llL~SDGl~d~l~~~~~~v~~~~~~~~~-~~~~~~~~~a~~Lv~~A~~------------------ 318 (364)
T 2isn_A 258 VPDVRQFYALSSDLLLLACDGVYEPSGMDWAYVRDLTVAEMQ-RSKGDLEEVAARVMDYAYD------------------ 318 (364)
T ss_dssp CCEEEEEEECTTCEEEEECHHHHCSSSCCHHHHHHHHHHHHH-HTTSCHHHHHHHHHHHHHH------------------
T ss_pred EeEEEEEECCCCCEEEEEcCCCCCCCCCCHHHHHHHHHHHHh-hcCCCHHHHHHHHHHHHHh------------------
Confidence 678899999999999999999999986 7788776543210 0125799999999999983
Q ss_pred CCCCCCCCCCceEEEEEEEe
Q psy4512 81 GISTQGGKPDDITVLLAIVA 100 (101)
Q Consensus 81 ~~~~~gg~~DdiTvvvv~v~ 100 (101)
+| ..|||||+|+++.
T Consensus 319 ----~g-~~DNiTvivv~~~ 333 (364)
T 2isn_A 319 ----MN-SQDNISVMLVAFH 333 (364)
T ss_dssp ----TT-CCSCEEEEEEEEC
T ss_pred ----cC-CCCCEEEEEEEcC
Confidence 34 4999999999874
No 15
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans}
Probab=99.54 E-value=5.6e-16 Score=107.59 Aligned_cols=65 Identities=26% Similarity=0.415 Sum_probs=48.3
Q ss_pred Cccc--eeEeccCCCEEEEeecCCCCCCChHHHHHHHHHhhCCCCchhHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHc
Q psy4512 3 CADT--SQFQVEDGDVILLATDGVFDNVPDSLLLAELVRAQGSKDPMQLQLVANTIALMARTLAFDETYMSPFAIQARAN 80 (101)
Q Consensus 3 ~~d~--~~~~l~~gD~lvl~SDGl~d~l~~~ei~~~l~~~~~~~~~~~~~~~a~~Lv~~A~~~~~d~~~~~p~~~~a~~~ 80 (101)
++++ ..+++++||+||||||||||+++++++.+++... .+ |+.|++.|+.
T Consensus 144 ~~~~~~~~~~l~~gd~llL~SDGl~d~~~~~~i~~~l~~~------~~----a~~L~~~a~~------------------ 195 (211)
T 3rnr_A 144 EISTSEAPLPLEAGEGVLVVSDGVYRSLHEDRIAMALSRG------SD----ARGILQEVEA------------------ 195 (211)
T ss_dssp CCEECSSCEECCTTCEEEEEEC-----CCTTEEEEEECTT------SC----HHHHHHHHHH------------------
T ss_pred ceeEecceecCCCCCEEEEEcCCCCCCcCHHHHHHHHhcC------Ch----HHHHHHHHHH------------------
Confidence 4566 7899999999999999999999999988777543 12 8999999983
Q ss_pred CCCCCC-CCCCceEEEEEEE
Q psy4512 81 GISTQG-GKPDDITVLLAIV 99 (101)
Q Consensus 81 ~~~~~g-g~~DdiTvvvv~v 99 (101)
.| +..|||||+|+++
T Consensus 196 ----~g~~~~DNiTvivv~L 211 (211)
T 3rnr_A 196 ----QGRPYQDNATLALVIL 211 (211)
T ss_dssp ----SCTTSCSSCEEEEEEC
T ss_pred ----cCCCCCCceEEEEEeC
Confidence 23 2589999999974
No 16
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A
Probab=99.53 E-value=7.6e-15 Score=113.14 Aligned_cols=94 Identities=16% Similarity=0.089 Sum_probs=57.5
Q ss_pred CccceeEeccCCCE-EEEeecCCCCCCChHHHHHHHHHhhCCCCchh------------------------------HHH
Q psy4512 3 CADTSQFQVEDGDV-ILLATDGVFDNVPDSLLLAELVRAQGSKDPMQ------------------------------LQL 51 (101)
Q Consensus 3 ~~d~~~~~l~~gD~-lvl~SDGl~d~l~~~ei~~~l~~~~~~~~~~~------------------------------~~~ 51 (101)
+|++..++|.+||. ||||||||||.|+++++++++..........+ .+.
T Consensus 327 ~Pdv~~~~l~~~D~fLVLaSDGLwd~ls~~eiv~iv~~~~~~~~~~~p~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~n 406 (467)
T 2pnq_A 327 EPEVTYHRLRPQDKFLVLATDGLWETMHRQDVVRIVGEYLTGMHHQQPIAVGGYKVTLGQMHGLLTERRAKMSSVFEDQN 406 (467)
T ss_dssp CCEEEEEECCTTEEEEEEECHHHHTTSCHHHHHHHHHHHHTTCSSCC-------------------------------CC
T ss_pred cceEEEEEcCCCCeEEEEEecCccccCChHHHHHHHHHHHhhccccCcccccccCccHHHHHHHHHHhhhcccCCchhhH
Confidence 67888999999996 56999999999999999999987642110011 156
Q ss_pred HHHHHHHHHHHHhcCCCCCCHHHH----HHHHcCCCCCCCCCCceEEEEEEEe
Q psy4512 52 VANTIALMARTLAFDETYMSPFAI----QARANGISTQGGKPDDITVLLAIVA 100 (101)
Q Consensus 52 ~a~~Lv~~A~~~~~d~~~~~p~~~----~a~~~~~~~~gg~~DdiTvvvv~v~ 100 (101)
+|.+|++.|+..+ +.....++. .....| .++..+|||||+||++.
T Consensus 407 aA~~Lir~Al~~~--~~Ge~~~~~~~~ll~~~~~--~~R~~~DdITViVv~~~ 455 (467)
T 2pnq_A 407 AATHLIRHAVGNN--EFGAVDHERLSKMLSLPEE--LARMYRDDITIIVVQFN 455 (467)
T ss_dssp HHHHHHHHHHC-----------------------------CCSCEEEEEEEEC
T ss_pred HHHHHHHHHhcCC--CcCcchHHHHHhhhcCCcc--ccccCCCCcEEEEEEeC
Confidence 7888888887432 000001110 011112 23445899999999874
No 17
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A
Probab=99.53 E-value=2.2e-15 Score=113.87 Aligned_cols=86 Identities=14% Similarity=0.208 Sum_probs=62.4
Q ss_pred Ccccee-EeccCCC-EEEEeecCCCCCC--------ChHHHHHHHHHhhCCCCchhHHHHHHHHHHHHHHHhcCCCCCCH
Q psy4512 3 CADTSQ-FQVEDGD-VILLATDGVFDNV--------PDSLLLAELVRAQGSKDPMQLQLVANTIALMARTLAFDETYMSP 72 (101)
Q Consensus 3 ~~d~~~-~~l~~gD-~lvl~SDGl~d~l--------~~~ei~~~l~~~~~~~~~~~~~~~a~~Lv~~A~~~~~d~~~~~p 72 (101)
+|++.. ++|.+|| +||||||||||++ ++++|++++..... ...+++.+|+.|++.|++.+.+.
T Consensus 269 ~Pdv~~~~~l~~~d~flvLaSDGlwd~l~~~~~~~~s~~ei~~~v~~~l~--~~~~~~~~a~~Lv~~A~~~~~~a----- 341 (401)
T 2j4o_A 269 EPEIHGAQPLDGVTGFLVLMSEGLYKALEAAHGPGQANQEIAAMIDTEFA--KQTSLDAVAQAVVDRVKRIHSDT----- 341 (401)
T ss_dssp CCEEEEEEECTTCCEEEEEECHHHHHHHHHHHCTTCHHHHHHHHHHHHHH--HCSSHHHHHHHHHHHHHHHHHHH-----
T ss_pred cceEEEeEEeCCCCcEEEEEccchhhcccccccCCCCHHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHhhhhh-----
Confidence 577885 9999999 5899999999999 89999999986420 02579999999999998643221
Q ss_pred HHHHHHHcCCC--CCCCCCCceEEEEEEEe
Q psy4512 73 FAIQARANGIS--TQGGKPDDITVLLAIVA 100 (101)
Q Consensus 73 ~~~~a~~~~~~--~~gg~~DdiTvvvv~v~ 100 (101)
...|-. ..+++.|||||||+++.
T Consensus 342 -----~~~G~~~~~~~~~~DNiTvivv~~~ 366 (401)
T 2j4o_A 342 -----FASGGERARFCPRHEDMTLLVRNFG 366 (401)
T ss_dssp -----HHSCSSGGGGCSEECCEEEEEEEEB
T ss_pred -----hhcCCcccccCCCCCCeEEEEEEcC
Confidence 011100 00124899999999975
No 18
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae}
Probab=99.50 E-value=6.6e-15 Score=109.56 Aligned_cols=88 Identities=14% Similarity=0.160 Sum_probs=64.7
Q ss_pred Ccccee-EeccCCCE-EEEeecCCCCCCC----------hHHHHHHHHHhhCCCCchhHHHHHHHHHHHHHHHhcCCCCC
Q psy4512 3 CADTSQ-FQVEDGDV-ILLATDGVFDNVP----------DSLLLAELVRAQGSKDPMQLQLVANTIALMARTLAFDETYM 70 (101)
Q Consensus 3 ~~d~~~-~~l~~gD~-lvl~SDGl~d~l~----------~~ei~~~l~~~~~~~~~~~~~~~a~~Lv~~A~~~~~d~~~~ 70 (101)
+|++.. ++|.+||. ||||||||||+++ +++|.++++... ....+++.+|+.|++.|++.+.+.
T Consensus 255 ~Pdi~~~~~l~~~d~fllL~SDGl~d~l~~~~~~~~~~~~~ei~~~v~~~~--~~~~~~~~~a~~Lv~~A~~~~~~~--- 329 (358)
T 2irm_A 255 EPEIVGGIQITPACRFLVLMSSGLCRALHEIFPGDASTGNRELVRMISEEF--QNQSTLGGVAQSVVHRIVQAHHDT--- 329 (358)
T ss_dssp CCEEEEEEECCTTEEEEEEECHHHHHHHHHHSCSSSSHHHHHHHHHHHHHT--TTCCSHHHHHHHHHHHHHHHHHHH---
T ss_pred cCeEEEEEEeCCCCcEEEEECCCcccCccccccccccccHHHHHHHHHHHH--hcCCCHHHHHHHHHHHHHHhhhhh---
Confidence 577884 99999987 7999999999999 899999998753 123579999999999998643221
Q ss_pred CHHHHHHHHcCCCCCCC--CCCceEEEEEEEe
Q psy4512 71 SPFAIQARANGISTQGG--KPDDITVLLAIVA 100 (101)
Q Consensus 71 ~p~~~~a~~~~~~~~gg--~~DdiTvvvv~v~ 100 (101)
|.... ..+ ..+| +.|||||||+++.
T Consensus 330 --~~~~~-~~~--~~~Gg~~~DNiTvivv~~~ 356 (358)
T 2irm_A 330 --YMQLV-EEH--RSVTFNSRDDVTLLIRNFN 356 (358)
T ss_dssp --HHHHH-SSS--CCCCCCEECCEEEEEEESC
T ss_pred --hcccc-ccc--cccCCCCCCCeEEEEEeCC
Confidence 11110 011 1233 6999999999874
No 19
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A*
Probab=99.41 E-value=5.1e-13 Score=93.66 Aligned_cols=74 Identities=19% Similarity=0.315 Sum_probs=58.1
Q ss_pred CccceeEeccCCCEEEEeecCCCCCCC-----hHHHHHHHHHhhCCCCchhHHHHHHHHHHHHHHHhcCCCCCCHHHHHH
Q psy4512 3 CADTSQFQVEDGDVILLATDGVFDNVP-----DSLLLAELVRAQGSKDPMQLQLVANTIALMARTLAFDETYMSPFAIQA 77 (101)
Q Consensus 3 ~~d~~~~~l~~gD~lvl~SDGl~d~l~-----~~ei~~~l~~~~~~~~~~~~~~~a~~Lv~~A~~~~~d~~~~~p~~~~a 77 (101)
.++..+++|++||+|+|||||||+.+. ...+.+++.... ..+++++++.|++.+...
T Consensus 142 ~~~~~~~~l~~GD~lll~SDGl~e~~~~~~~~~~~~~~ll~~~~----~~~~~~~~~~l~~~~~~~-------------- 203 (242)
T 3t91_A 142 DVEVVSEQLKAGDLLIMMSDGIFEGPKHVENHDLWMKRKMKGLK----TNDPQEIADLLMEEVIRT-------------- 203 (242)
T ss_dssp CEEEEEEECCTTCEEEEECHHHHTCSTTCSCHHHHHHHHHHTCC----CCCHHHHHHHHHHHHHHH--------------
T ss_pred cceEEEEEeCCCCEEEEECCCcccCCCcccchHHHHHHHHHHhc----CCCHHHHHHHHHHHHHHH--------------
Confidence 456778999999999999999999987 456666665432 367999999999999852
Q ss_pred HHcCCCCCCCCCCceEEEEEEEe
Q psy4512 78 RANGISTQGGKPDDITVLLAIVA 100 (101)
Q Consensus 78 ~~~~~~~~gg~~DdiTvvvv~v~ 100 (101)
..+...||||++++++.
T Consensus 204 ------~~~~~~DDiTvv~i~~~ 220 (242)
T 3t91_A 204 ------RSGQIEDDMTVVVVRID 220 (242)
T ss_dssp ------TTSCCCSCEEEEEEEEE
T ss_pred ------cCCCCCCceEEEEEEEe
Confidence 11224799999999975
No 20
>3zt9_A Serine phosphatase; hydrolase, signal transduction, protein protein interaction,; HET: PEG; 1.75A {Moorella thermoacetica}
Probab=99.29 E-value=2.7e-12 Score=88.01 Aligned_cols=63 Identities=21% Similarity=0.290 Sum_probs=52.7
Q ss_pred CccceeEeccCCCEEEEeecCCCCCCChHHHHHHHHHhhCCCCchhHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHcCC
Q psy4512 3 CADTSQFQVEDGDVILLATDGVFDNVPDSLLLAELVRAQGSKDPMQLQLVANTIALMARTLAFDETYMSPFAIQARANGI 82 (101)
Q Consensus 3 ~~d~~~~~l~~gD~lvl~SDGl~d~l~~~ei~~~l~~~~~~~~~~~~~~~a~~Lv~~A~~~~~d~~~~~p~~~~a~~~~~ 82 (101)
..+..++++++||+++||||||++.+..+++..++ ..+|+++|+.|++.+.
T Consensus 131 ~~~~~~~~l~~gd~l~l~sDGl~e~~~~~~~~~~~--------~~~~~~~a~~l~~~~~--------------------- 181 (193)
T 3zt9_A 131 QLLIAKGSYQEGDLFLIHSDGIQEGAVPLALLANY--------RLTAEELVRLIGEKYG--------------------- 181 (193)
T ss_dssp SCCCEEEECCTTCEEEEECTTSCTTCSCGGGGGCT--------TSCHHHHHHHHHHHHC---------------------
T ss_pred cceeEEeccCCCCEEEEECCCCCCccChhhhhchh--------cCCHHHHHHHHHHHhC---------------------
Confidence 56778899999999999999999999887765432 2579999999999873
Q ss_pred CCCCCCCCceEEEEEE
Q psy4512 83 STQGGKPDDITVLLAI 98 (101)
Q Consensus 83 ~~~gg~~DdiTvvvv~ 98 (101)
+ ..||+||+|+|
T Consensus 182 ---~-~~Dd~tvlv~r 193 (193)
T 3zt9_A 182 ---R-RDDDVAVIVAR 193 (193)
T ss_dssp ---C-TTSCEEEEEEC
T ss_pred ---c-CCCCeEEEEEC
Confidence 2 38999999985
No 21
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus}
Probab=99.28 E-value=6.3e-12 Score=88.76 Aligned_cols=73 Identities=19% Similarity=0.221 Sum_probs=54.7
Q ss_pred CccceeEeccCCCEEEEeecCCCCCCC-------hHHHHHHHHHhhCCCCchhHHHHHHHHHHHHHHHhcCCCCCCHHHH
Q psy4512 3 CADTSQFQVEDGDVILLATDGVFDNVP-------DSLLLAELVRAQGSKDPMQLQLVANTIALMARTLAFDETYMSPFAI 75 (101)
Q Consensus 3 ~~d~~~~~l~~gD~lvl~SDGl~d~l~-------~~ei~~~l~~~~~~~~~~~~~~~a~~Lv~~A~~~~~d~~~~~p~~~ 75 (101)
.++..+++|++||+|+||||||++... .+++..++. . ...+++++++.|++.+...
T Consensus 145 ~~~~~~~~l~~Gd~lll~TDGl~e~~~~~~~~~g~~~l~~l~~-~----~~~~~~~~~~~l~~~~~~~------------ 207 (242)
T 3pu9_A 145 RPRVLEFPAEPGLTVILVSDGIIGAGGRRGQPLEFLATGGRVA-G----PETPAQAIADELLEAALVA------------ 207 (242)
T ss_dssp CCEEEEEECCTTCEEEEECHHHHTTTTTTTCCCCHHHHHHHHC-C----TTCCHHHHHHHHHHHHHHH------------
T ss_pred CceEEEEEeCCCCEEEEECcCcccCCCCccccccHHHHHHHHh-c----cCCCHHHHHHHHHHHHHHh------------
Confidence 456778999999999999999998653 356643332 1 1357999999999999852
Q ss_pred HHHHcCCCCCCCCCCceEEEEEEEe
Q psy4512 76 QARANGISTQGGKPDDITVLLAIVA 100 (101)
Q Consensus 76 ~a~~~~~~~~gg~~DdiTvvvv~v~ 100 (101)
..+...||||++++++.
T Consensus 208 --------~~~~~~DDiTvlvv~~~ 224 (242)
T 3pu9_A 208 --------DDGRAGDDMTVVVLRLR 224 (242)
T ss_dssp --------TTTSCSSCEEEEEEEEE
T ss_pred --------cCCCCCCCeEEEEEEEe
Confidence 11224799999999974
No 22
>3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A
Probab=99.25 E-value=6.5e-12 Score=88.72 Aligned_cols=69 Identities=22% Similarity=0.310 Sum_probs=47.7
Q ss_pred CccceeEeccCCCEEEEeecCCCCCCChHH-------HHHHHHHhhCCCCchhHHHHHHHHHHHHHHHhcCCCCCCHHHH
Q psy4512 3 CADTSQFQVEDGDVILLATDGVFDNVPDSL-------LLAELVRAQGSKDPMQLQLVANTIALMARTLAFDETYMSPFAI 75 (101)
Q Consensus 3 ~~d~~~~~l~~gD~lvl~SDGl~d~l~~~e-------i~~~l~~~~~~~~~~~~~~~a~~Lv~~A~~~~~d~~~~~p~~~ 75 (101)
.++..+++|++||+|+||||||++.+..++ +.+++.... ..++.+++.|. .+.
T Consensus 178 ~~~~~~~~l~~gd~lll~TDGl~e~~~~~~~~~g~~~l~~~l~~~~-----~~~~~~~~~l~-~~~-------------- 237 (255)
T 3f79_A 178 TYDDRVMELPPSFSLSLFSDGILDVLPGATLKEKEASLPEQVAAAG-----GTLDGLRQVFG-LAN-------------- 237 (255)
T ss_dssp CCCC---BCCSSEEEEEECSCCCCCSCC---CCTTTSSHHHHHHHS-----CSSHHHHHHC-------------------
T ss_pred ceEEEEEEECCCCEEEEECCCcCcccCCCcchhhHHHHHHHHHhcC-----CCHHHHHHHHH-hcc--------------
Confidence 456778899999999999999999987766 777776542 35677888776 332
Q ss_pred HHHHcCCCCCCCCCCceEEEEEEEe
Q psy4512 76 QARANGISTQGGKPDDITVLLAIVA 100 (101)
Q Consensus 76 ~a~~~~~~~~gg~~DdiTvvvv~v~ 100 (101)
.++..|||||++++..
T Consensus 238 ---------~~~~~DDiTvl~v~~~ 253 (255)
T 3f79_A 238 ---------LAEMPDDIALLVLSRN 253 (255)
T ss_dssp ----------CCSSSCEEEEEEEEC
T ss_pred ---------CCCCCCCEEEEEEEec
Confidence 3455899999999865
No 23
>3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis}
Probab=98.78 E-value=4.6e-08 Score=73.51 Aligned_cols=79 Identities=16% Similarity=0.119 Sum_probs=47.4
Q ss_pred ccceeEeccCCCEEEEeecCCCCCCCh------HHHHHHHHHhhCCCC---chhHHHHHHHHHHHHHHHhcCCCCCCHHH
Q psy4512 4 ADTSQFQVEDGDVILLATDGVFDNVPD------SLLLAELVRAQGSKD---PMQLQLVANTIALMARTLAFDETYMSPFA 74 (101)
Q Consensus 4 ~d~~~~~l~~gD~lvl~SDGl~d~l~~------~ei~~~l~~~~~~~~---~~~~~~~a~~Lv~~A~~~~~d~~~~~p~~ 74 (101)
.+..+++|++||.|+|+||||++.... +.+.+++........ ..+|+..++.|++.+...+.
T Consensus 170 ~~~~~~~l~~Gd~l~l~TDGl~e~~~~~~~~g~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--------- 240 (399)
T 3ke6_A 170 FPVRSEVLNIGDAILFYTDGLIERPGRPLEASTAEFADLAASIASGSGGFVLDAPARPIDRLCSDTLELLL--------- 240 (399)
T ss_dssp CCCEEEECCTTCEEEEECTTTTSCTTCCHHHHHHHHHHHHHHHTC----------CCHHHHHHHHHHHHHH---------
T ss_pred ceeEEEEECCCCEEEEECCCcccCCCCCcchhHHHHHHHHHHhhcccccccccChhhHHHHHHHHHHHHhc---------
Confidence 456789999999999999999998744 345555544321000 01233444455544442110
Q ss_pred HHHHHcCCCCCCCCCCceEEEEEEEe
Q psy4512 75 IQARANGISTQGGKPDDITVLLAIVA 100 (101)
Q Consensus 75 ~~a~~~~~~~~gg~~DdiTvvvv~v~ 100 (101)
..++..|||||+++++.
T Consensus 241 ---------~~~~~~DDitvl~vr~~ 257 (399)
T 3ke6_A 241 ---------RSTGYNDDVTLLAMQRR 257 (399)
T ss_dssp ---------HTTCCSSCEEEEEEEEC
T ss_pred ---------cCCCCCCceEEEEEEee
Confidence 12345899999999874
No 24
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A
Probab=98.20 E-value=6e-07 Score=66.37 Aligned_cols=25 Identities=20% Similarity=0.324 Sum_probs=20.4
Q ss_pred ccceeEeccCCCEEEEeecCCCCCC
Q psy4512 4 ADTSQFQVEDGDVILLATDGVFDNV 28 (101)
Q Consensus 4 ~d~~~~~l~~gD~lvl~SDGl~d~l 28 (101)
....+++|++||.++|+||||++..
T Consensus 318 ~~~~~~~l~~gd~l~l~TDG~~e~~ 342 (394)
T 3eq2_A 318 YDDRVMELPPSFSLSLFSDGILDVL 342 (394)
T ss_dssp -CCEEEECCSSCEEEECSSCCCC--
T ss_pred eEEEEEEeCCCCEEEEECCCccccc
Confidence 4567899999999999999999964
No 25
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=59.33 E-value=0.36 Score=37.44 Aligned_cols=55 Identities=13% Similarity=0.029 Sum_probs=39.1
Q ss_pred CccceeEeccC--CC----EEEEeecCCCCCCChHHHHHHHHHhhCCCCchhHHHHHHHHHHHHH
Q psy4512 3 CADTSQFQVED--GD----VILLATDGVFDNVPDSLLLAELVRAQGSKDPMQLQLVANTIALMAR 61 (101)
Q Consensus 3 ~~d~~~~~l~~--gD----~lvl~SDGl~d~l~~~ei~~~l~~~~~~~~~~~~~~~a~~Lv~~A~ 61 (101)
+.|+..+.++. || .+++++ ++.+...++.+++..... ....+.+..|+.|++.+.
T Consensus 55 ~~d~~~~~~~~~ig~~~~~~f~~t~---~~~~~~~~~~~~i~e~~~-~~~~~~~~~~~~l~~~~~ 115 (543)
T 3c4z_A 55 DLGFEGMCLEQPIGKRLFQQFLRTH---EQHGPALQLWKDIEDYDT-ADDALRPQKAQALRAAYL 115 (543)
T ss_dssp CCCHHHHHTSSHHHHHHHHHHHHHC---GGGHHHHHHHHHHHHHHT-SCTTTHHHHHHHHHHHHT
T ss_pred ccCHHHhhccCcccHHHHHHHHhcC---CchhHHHHHHhhhhhhcc-CchhhHHHHHHHHHHHhh
Confidence 34566677888 88 677777 777777777777776521 122468889999999986
No 26
>2eqj_A Metal-response element-binding transcription factor 2; structure genomics,tudor domain, zinc-regulated factor 1, ZIRF1; NMR {Mus musculus}
Probab=53.96 E-value=7.9 Score=21.98 Aligned_cols=19 Identities=32% Similarity=0.681 Sum_probs=15.1
Q ss_pred eeEeccCCCEEEEe-ecCCC
Q psy4512 7 SQFQVEDGDVILLA-TDGVF 25 (101)
Q Consensus 7 ~~~~l~~gD~lvl~-SDGl~ 25 (101)
....++.||-++.+ |||++
T Consensus 10 ~~~~f~vGddVLA~wtDGl~ 29 (66)
T 2eqj_A 10 PACKFEEGQDVLARWSDGLF 29 (66)
T ss_dssp CCCCSCTTCEEEEECTTSCE
T ss_pred ccccccCCCEEEEEEccCcE
Confidence 34568899998887 99985
No 27
>2e5q_A PHD finger protein 19; tudor domain, isoform B, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=51.14 E-value=8.4 Score=21.62 Aligned_cols=19 Identities=26% Similarity=0.529 Sum_probs=14.9
Q ss_pred eEeccCCCEEEEe-ecCCCC
Q psy4512 8 QFQVEDGDVILLA-TDGVFD 26 (101)
Q Consensus 8 ~~~l~~gD~lvl~-SDGl~d 26 (101)
...+++|+-++.. |||++-
T Consensus 5 ~~~f~eGqdVLarWsDGlfY 24 (63)
T 2e5q_A 5 SSGLTEGQYVLCRWTDGLYY 24 (63)
T ss_dssp CCCCCTTCEEEEECTTSCEE
T ss_pred ccceecCCEEEEEecCCCEE
Confidence 3467889888888 999973
No 28
>4hcz_A PHD finger protein 1; protein-peptide complex, tudor, histone binding, H3K36ME3, N nucleus, transcription; HET: M3L; 1.85A {Homo sapiens}
Probab=49.58 E-value=6.7 Score=21.71 Aligned_cols=17 Identities=24% Similarity=0.319 Sum_probs=11.9
Q ss_pred EeccCCCEE-EEeecCCC
Q psy4512 9 FQVEDGDVI-LLATDGVF 25 (101)
Q Consensus 9 ~~l~~gD~l-vl~SDGl~ 25 (101)
..+++|+-+ +-+|||++
T Consensus 2 ~~f~~GedVLarwsDG~f 19 (58)
T 4hcz_A 2 PRLWEGQDVLARWTDGLL 19 (58)
T ss_dssp CSCCTTCEEEEECTTSCE
T ss_pred CccccCCEEEEEecCCCE
Confidence 356777654 55999986
No 29
>1x9a_A Hypothetical protein TM0979; structural genomics, protein structure initiative, PSI, northeast structural genomics consortium, NESG, OCSP; NMR {Thermotoga maritima} SCOP: c.114.1.2
Probab=48.35 E-value=6.9 Score=24.02 Aligned_cols=20 Identities=30% Similarity=0.499 Sum_probs=16.3
Q ss_pred ccCCCEEEEeecCCCCCCCh
Q psy4512 11 VEDGDVILLATDGVFDNVPD 30 (101)
Q Consensus 11 l~~gD~lvl~SDGl~d~l~~ 30 (101)
+++||.|+|.-|||+-.+..
T Consensus 42 ~~~~D~ILLiqDGV~aal~~ 61 (107)
T 1x9a_A 42 AKAEDKIVLIQNGVFWALEE 61 (107)
T ss_dssp CCTTCEEEECGGGGGGGGSC
T ss_pred hCCCCEEEEEchHHHHHhhc
Confidence 57899999999999765543
No 30
>2m0o_A PHD finger protein 1; tudor domain, H3K36ME3 binding, peptide binding protein; HET: M3L; NMR {Homo sapiens}
Probab=45.26 E-value=11 Score=22.07 Aligned_cols=18 Identities=28% Similarity=0.364 Sum_probs=13.0
Q ss_pred EeccCCCEEEE-eecCCCC
Q psy4512 9 FQVEDGDVILL-ATDGVFD 26 (101)
Q Consensus 9 ~~l~~gD~lvl-~SDGl~d 26 (101)
..+..|+-+++ +|||++-
T Consensus 25 ~~f~eGeDVLarwsDGlfY 43 (79)
T 2m0o_A 25 PRLWEGQDVLARWTDGLLY 43 (79)
T ss_dssp CCCCTTCEEEBCCTTSCCC
T ss_pred ceeccCCEEEEEecCCCEE
Confidence 56777765554 9999974
No 31
>2d1p_C TUSB, hypothetical protein YHEL; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.2
Probab=43.52 E-value=7.4 Score=23.02 Aligned_cols=28 Identities=36% Similarity=0.516 Sum_probs=20.3
Q ss_pred ccCCCEEEEeecCCCCCCChHHHHHHHH
Q psy4512 11 VEDGDVILLATDGVFDNVPDSLLLAELV 38 (101)
Q Consensus 11 l~~gD~lvl~SDGl~d~l~~~ei~~~l~ 38 (101)
+.+||-++|.-|||+--+........+.
T Consensus 21 ~~~~D~llL~~DgV~~a~~~~~~~~~l~ 48 (95)
T 2d1p_C 21 LSEGDELLLLQDGVTAAVDGNRYLESLR 48 (95)
T ss_dssp CCTTCEEEECGGGGGGGBTTCTTHHHHH
T ss_pred cCCCCEEEEEchHHHHHHcCCcHHHHHH
Confidence 4689999999999988776544333343
No 32
>1dhn_A DHNA, 7,8-dihydroneopterin aldolase; pterin binding, folate biosynthesis, antibiotic target, beta; 1.65A {Staphylococcus aureus} SCOP: d.96.1.3 PDB: 1rri_A* 1rrw_A* 1rry_A* 1rs2_A* 1rs4_A* 1rsd_A* 1rsi_A* 1u68_A* 2dhn_A* 2nm2_A* 2nm3_A*
Probab=38.63 E-value=57 Score=19.83 Aligned_cols=42 Identities=26% Similarity=0.225 Sum_probs=32.0
Q ss_pred ecCCCCCCChHHHHHHHHHhhCCCCchhHHHHHHHHHHHHHH
Q psy4512 21 TDGVFDNVPDSLLLAELVRAQGSKDPMQLQLVANTIALMART 62 (101)
Q Consensus 21 SDGl~d~l~~~ei~~~l~~~~~~~~~~~~~~~a~~Lv~~A~~ 62 (101)
||-|-+.+.-.++.+.+.+......-.-.+.+|+++.+..+.
T Consensus 45 sDdl~~tvdY~~v~~~i~~~v~~~~~~LiE~lA~~Ia~~~l~ 86 (121)
T 1dhn_A 45 TDNVIDTVHYGEVFEEVKSIMEGKAVNLLEHLAERIANRINS 86 (121)
T ss_dssp HCCGGGSCCHHHHHHHHHHHHTSSCCSCHHHHHHHHHHHHHH
T ss_pred cCCccceeCHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHH
Confidence 677888888888888888765433446688899999888874
No 33
>1rhx_A Conserved hypothetical protein TM0979; DSRH, structural genomics, joint center for structural genom JCSG, protein structure initiative, PSI; NMR {Thermotoga maritima} SCOP: c.114.1.2
Probab=37.94 E-value=4.5 Score=23.66 Aligned_cols=20 Identities=30% Similarity=0.499 Sum_probs=16.8
Q ss_pred ccCCCEEEEeecCCCCCCCh
Q psy4512 11 VEDGDVILLATDGVFDNVPD 30 (101)
Q Consensus 11 l~~gD~lvl~SDGl~d~l~~ 30 (101)
+++||.|+|.-||++--+..
T Consensus 22 ~~~~D~ilL~~DgV~~a~~~ 41 (87)
T 1rhx_A 22 AKAEDKIVLIQNGVFWALEE 41 (87)
T ss_dssp CCTTCBCCBCTTGGGGTTCS
T ss_pred hCCCCEEEEEchhHHHHhhc
Confidence 56899999999999876654
No 34
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=37.16 E-value=47 Score=19.53 Aligned_cols=30 Identities=17% Similarity=0.151 Sum_probs=18.0
Q ss_pred eccCCCEEEEeecCCC-CCCChHHHHHHHHHh
Q psy4512 10 QVEDGDVILLATDGVF-DNVPDSLLLAELVRA 40 (101)
Q Consensus 10 ~l~~gD~lvl~SDGl~-d~l~~~ei~~~l~~~ 40 (101)
.|++||.|+ .=+|.. ..++.+++.++++..
T Consensus 59 ~l~~GD~Il-~Vng~~~~~~~~~~~~~~l~~~ 89 (109)
T 1wi4_A 59 RLKPGDQLV-SINKESMIGVSFEEAKSIITRA 89 (109)
T ss_dssp SCCTTCBEE-EETTSCCTTCCHHHHHHHHHHS
T ss_pred CCCCCCEEE-EECCEECCCCCHHHHHHHHHcc
Confidence 488888765 456752 233456666666553
No 35
>1uhe_A Aspartate 1-decarboxylase alpha chain; double-PSI beta barrel, lyase; HET: NSN; 1.55A {Helicobacter pylori} SCOP: b.52.2.1 PDB: 1uhd_A
Probab=36.79 E-value=19 Score=21.94 Aligned_cols=22 Identities=18% Similarity=0.374 Sum_probs=16.0
Q ss_pred eccCCCEEEEeecCCCCCCChHHHH
Q psy4512 10 QVEDGDVILLATDGVFDNVPDSLLL 34 (101)
Q Consensus 10 ~l~~gD~lvl~SDGl~d~l~~~ei~ 34 (101)
..++||.+|++|=+..+ ++|+.
T Consensus 52 l~~~GD~vII~aY~~~~---~~e~~ 73 (97)
T 1uhe_A 52 KVAIGDVVIILAYASMN---EDEIN 73 (97)
T ss_dssp GCCTTCEEEEEEEEEEC---HHHHH
T ss_pred cCCCCCEEEEEECccCC---HHHHh
Confidence 46899999999977643 55543
No 36
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=36.49 E-value=40 Score=18.92 Aligned_cols=30 Identities=20% Similarity=0.357 Sum_probs=19.6
Q ss_pred eccCCCEEEEeecCC-CCCCChHHHHHHHHHh
Q psy4512 10 QVEDGDVILLATDGV-FDNVPDSLLLAELVRA 40 (101)
Q Consensus 10 ~l~~gD~lvl~SDGl-~d~l~~~ei~~~l~~~ 40 (101)
.|+.||+|+- =+|. ..+.+.+++.++++..
T Consensus 39 ~L~~GD~Il~-ing~~v~~~~~~~~~~~i~~~ 69 (88)
T 3e17_A 39 NLHEGDIILK-INGTVTENMSLTDARKLIEKS 69 (88)
T ss_dssp CCCTTCEEEE-ETTEECTTCCHHHHHHHHHHT
T ss_pred CCCCCCEEEE-ECCEECCCCCHHHHHHHHHcC
Confidence 4889997654 4554 2345667777777754
No 37
>1vc3_B L-aspartate-alpha-decarboxylase heavy chain; tetramer, pyruvoyl group, riken structural genomics/proteomi initiative, RSGI; 1.50A {Thermus thermophilus} PDB: 2eeo_B
Probab=35.69 E-value=20 Score=21.77 Aligned_cols=17 Identities=47% Similarity=0.880 Sum_probs=13.4
Q ss_pred eccCCCEEEEeecCCCC
Q psy4512 10 QVEDGDVILLATDGVFD 26 (101)
Q Consensus 10 ~l~~gD~lvl~SDGl~d 26 (101)
..++||.+|++|=+..+
T Consensus 54 l~~~GD~vII~aY~~~~ 70 (96)
T 1vc3_B 54 LVKPGDLVILVAYGVFD 70 (96)
T ss_dssp TCCTTCEEEEEEEEEEC
T ss_pred cCCCCCEEEEEECccCC
Confidence 46899999999977643
No 38
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=35.58 E-value=39 Score=20.61 Aligned_cols=32 Identities=16% Similarity=0.158 Sum_probs=20.4
Q ss_pred EeccCCCEEEEeecCCCCCCChHHHHHHHHHh
Q psy4512 9 FQVEDGDVILLATDGVFDNVPDSLLLAELVRA 40 (101)
Q Consensus 9 ~~l~~gD~lvl~SDGl~d~l~~~ei~~~l~~~ 40 (101)
-.|++||+|+-.-+==..+++.+|+.++++..
T Consensus 48 aGL~~GD~Il~VNG~~v~~~~h~evv~~lk~~ 79 (113)
T 3soe_A 48 QGLQKGDIIKEIYHQNVQNLTHLQVVEVLKQF 79 (113)
T ss_dssp TTCCTTCEEEEETTEECTTSCHHHHHHHHHHS
T ss_pred CCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 35789997665532223455667888888764
No 39
>3plx_B Aspartate 1-decarboxylase; structural genomics, center for structural genomics of infec diseases, csgid, double-PSI beta-barrel; 1.75A {Campylobacter jejuni subsp}
Probab=33.39 E-value=23 Score=21.75 Aligned_cols=22 Identities=18% Similarity=0.291 Sum_probs=15.8
Q ss_pred eccCCCEEEEeecCCCCCCChHHHH
Q psy4512 10 QVEDGDVILLATDGVFDNVPDSLLL 34 (101)
Q Consensus 10 ~l~~gD~lvl~SDGl~d~l~~~ei~ 34 (101)
..++||.+|++|=+..+ ++|+.
T Consensus 53 l~~~GD~vII~aY~~~~---~~e~~ 74 (102)
T 3plx_B 53 LAEVGDKVIIMSYADFN---EEEAK 74 (102)
T ss_dssp GCCTTCEEEEEEEEEEE---HHHHH
T ss_pred ccCCCCEEEEEEcccCC---HHHHh
Confidence 46899999999977543 45543
No 40
>2xsk_A CSGC; chaperone; 1.70A {Escherichia coli} PDB: 2y2y_A 2y2t_A
Probab=32.88 E-value=27 Score=21.54 Aligned_cols=22 Identities=14% Similarity=0.314 Sum_probs=16.8
Q ss_pred CccceeEeccCCCE---EEEeecCC
Q psy4512 3 CADTSQFQVEDGDV---ILLATDGV 24 (101)
Q Consensus 3 ~~d~~~~~l~~gD~---lvl~SDGl 24 (101)
+....++.+.+||. +|..|||=
T Consensus 63 ~L~~lslnI~~~D~vkIiVTVSDG~ 87 (110)
T 2xsk_A 63 ALTKLSLNISPDDRVKIVVTVSDGQ 87 (110)
T ss_dssp ECCCEEEECCTTCEEEEEEEEECSS
T ss_pred eeeeEEEEecCCCcEEEEEEEeCCC
Confidence 44556788999996 57899994
No 41
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=32.73 E-value=50 Score=18.86 Aligned_cols=30 Identities=17% Similarity=0.226 Sum_probs=17.2
Q ss_pred EeccCCCEEEEeecCCC-CCCChHHHHHHHHH
Q psy4512 9 FQVEDGDVILLATDGVF-DNVPDSLLLAELVR 39 (101)
Q Consensus 9 ~~l~~gD~lvl~SDGl~-d~l~~~ei~~~l~~ 39 (101)
--|++||+|+ .-+|.- .+++.+++.++++.
T Consensus 46 aGL~~GD~I~-~vng~~v~~~~~~~~~~~l~~ 76 (96)
T 1ujv_A 46 PGLCEGDLIV-EINQQNVQNLSHTEVVDILKD 76 (96)
T ss_dssp TTCCSSCEEE-EETTEECSSCCHHHHHHHHHH
T ss_pred CCCCCCCEEE-EECCEECCCCCHHHHHHHHHc
Confidence 3478899755 445531 23344666666664
No 42
>1nbu_A DHNA, probable dihydroneopterin aldolase; anti-parallel, beta-sheet, two alpha helices, structural genomics, PSI; HET: PH2; 1.60A {Mycobacterium tuberculosis} SCOP: d.96.1.3 PDB: 1nbu_B* 1nbu_C*
Probab=32.59 E-value=58 Score=19.73 Aligned_cols=42 Identities=14% Similarity=0.053 Sum_probs=31.0
Q ss_pred ecCCCCCCChHHHHHHHHHhhCCCCchhHHHHHHHHHHHHHH
Q psy4512 21 TDGVFDNVPDSLLLAELVRAQGSKDPMQLQLVANTIALMART 62 (101)
Q Consensus 21 SDGl~d~l~~~ei~~~l~~~~~~~~~~~~~~~a~~Lv~~A~~ 62 (101)
||-|-+.+.-.++.+.+.+......-.-.+.+|+++.+..+.
T Consensus 45 sDdl~~tvdY~~v~~~i~~~v~~~~~~LiE~lA~~Ia~~~l~ 86 (119)
T 1nbu_A 45 SDDLADTYDYVRLASRAAEIVAGPPRKLIETVGAEIADHVMD 86 (119)
T ss_dssp HCCGGGSCCHHHHHHHHHHHHHSSCCSCHHHHHHHHHHHHHT
T ss_pred cccchhccCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHhc
Confidence 677888887788888887754323346688899999988873
No 43
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=32.25 E-value=51 Score=19.24 Aligned_cols=30 Identities=20% Similarity=0.379 Sum_probs=17.5
Q ss_pred eccCCCEEEEeecCCC-CCCChHHHHHHHHHh
Q psy4512 10 QVEDGDVILLATDGVF-DNVPDSLLLAELVRA 40 (101)
Q Consensus 10 ~l~~gD~lvl~SDGl~-d~l~~~ei~~~l~~~ 40 (101)
.|++||+|+ .=+|.- .+++.+++..+++..
T Consensus 51 ~L~~GD~Il-~Vng~~v~~~~~~~~~~~l~~~ 81 (108)
T 3cbz_A 51 RIEPGDMLL-QVNDMNFENMSNDDAVRVLRDI 81 (108)
T ss_dssp CCCTTCEEE-EETTEETTSCCHHHHHHHHHHH
T ss_pred CCCCCCEEE-EECCEECCCCCHHHHHHHHHhc
Confidence 488999755 456632 233456666666543
No 44
>3cqb_A Probable protease HTPX homolog; heat shock protein HTPX domain, PSI-2, protein structure INI structural genomics; HET: MSE; 1.86A {Vibrio parahaemolyticus rimd 2210633}
Probab=31.59 E-value=9.5 Score=22.97 Aligned_cols=25 Identities=20% Similarity=0.316 Sum_probs=20.3
Q ss_pred CEEEEeecCCCCCCChHHHHHHHHH
Q psy4512 15 DVILLATDGVFDNVPDSLLLAELVR 39 (101)
Q Consensus 15 D~lvl~SDGl~d~l~~~ei~~~l~~ 39 (101)
..+|+.|.|+.+.++++|+..++..
T Consensus 65 ~~~i~v~~gLl~~l~~~El~aVlaH 89 (107)
T 3cqb_A 65 DSLVAVSTGLLHNMTRDEAEAVLAH 89 (107)
T ss_dssp CCEEEEEHHHHHHSCHHHHHHHHHH
T ss_pred CCEEEEcHHHHhhCCHHHHHHHHHH
Confidence 4578889999999988998877653
No 45
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=30.87 E-value=58 Score=17.97 Aligned_cols=28 Identities=18% Similarity=0.354 Sum_probs=15.7
Q ss_pred ccCCCEEEEeecCCC-CCCChHHHHHHHHH
Q psy4512 11 VEDGDVILLATDGVF-DNVPDSLLLAELVR 39 (101)
Q Consensus 11 l~~gD~lvl~SDGl~-d~l~~~ei~~~l~~ 39 (101)
|++||+|+ .-+|.- .+.+..++..+++.
T Consensus 46 L~~GD~I~-~ing~~v~~~~~~~~~~~l~~ 74 (90)
T 2q9v_A 46 LRSGDELI-SVDGTPVIGKSHQLVVQLMQQ 74 (90)
T ss_dssp CCTTCEEE-EETTEECTTSCHHHHHHHHHH
T ss_pred CCCCCEEE-EECCEECCCCCHHHHHHHHHh
Confidence 88899765 445531 22444565555543
No 46
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=30.82 E-value=77 Score=18.33 Aligned_cols=29 Identities=17% Similarity=0.170 Sum_probs=18.2
Q ss_pred eccCCCEEEEeecCCC-CCCChHHHHHHHHH
Q psy4512 10 QVEDGDVILLATDGVF-DNVPDSLLLAELVR 39 (101)
Q Consensus 10 ~l~~gD~lvl~SDGl~-d~l~~~ei~~~l~~ 39 (101)
.|++||+|+ .-+|.- ..++.+++..+++.
T Consensus 62 ~L~~GD~Il-~Vng~~v~~~~~~~~~~~l~~ 91 (108)
T 2d92_A 62 GLLPGDRLV-SVNEYCLDNTSLAEAVEILKA 91 (108)
T ss_dssp CCCTTCEEE-EESSCBCTTCCHHHHHHHHHH
T ss_pred CCCCCCEEE-EECCEECCCCCHHHHHHHHHh
Confidence 388999764 567752 23455677766665
No 47
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=30.57 E-value=57 Score=18.71 Aligned_cols=29 Identities=14% Similarity=0.312 Sum_probs=16.3
Q ss_pred eccCCCEEEEeecCCC-CCCChHHHHHHHHH
Q psy4512 10 QVEDGDVILLATDGVF-DNVPDSLLLAELVR 39 (101)
Q Consensus 10 ~l~~gD~lvl~SDGl~-d~l~~~ei~~~l~~ 39 (101)
.|++||+|+ .-+|.- ..++.+++..+++.
T Consensus 52 ~L~~GD~Il-~ing~~v~~~~~~~~~~~l~~ 81 (103)
T 1uep_A 52 RLHPGDELV-YVDGIPVAGKTHRYVIDLMHH 81 (103)
T ss_dssp CCCTTCEEE-EETTEECTTSCHHHHHHHHHH
T ss_pred CCCCCCEEE-EECCEECCCCCHHHHHHHHHh
Confidence 388999765 446631 22344566665554
No 48
>3jxo_A TRKA-N domain protein; TRKA K+ channel component, structural genomics, PSI-2-2, Pro structure initiative, joint center for structural genomics; 1.55A {Thermotoga SP}
Probab=30.53 E-value=27 Score=19.44 Aligned_cols=14 Identities=14% Similarity=0.349 Sum_probs=10.4
Q ss_pred eEeccCCCEEEEee
Q psy4512 8 QFQVEDGDVILLAT 21 (101)
Q Consensus 8 ~~~l~~gD~lvl~S 21 (101)
...|++||.+++..
T Consensus 58 ~~~l~~GD~l~v~g 71 (86)
T 3jxo_A 58 DTEILSGDKLYVIV 71 (86)
T ss_dssp TCBCCTTCEEEEEE
T ss_pred CCEECCCCEEEEEE
Confidence 45789999976654
No 49
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=30.09 E-value=73 Score=18.48 Aligned_cols=28 Identities=25% Similarity=0.248 Sum_probs=16.6
Q ss_pred ccCCCEEEEeecCCC-CCCChHHHHHHHHH
Q psy4512 11 VEDGDVILLATDGVF-DNVPDSLLLAELVR 39 (101)
Q Consensus 11 l~~gD~lvl~SDGl~-d~l~~~ei~~~l~~ 39 (101)
|++||+|+- -+|.- .+++-+++.++++.
T Consensus 55 L~~GD~Il~-ING~~v~~~~~~~~~~~l~~ 83 (97)
T 2ejy_A 55 LHVGDEILE-INGTNVTNHSVDQLQKAMKE 83 (97)
T ss_dssp CCTTCEEEE-ETTBCCCSSCSHHHHHHHHH
T ss_pred CCCCCEEEE-ECCEECCCCCHHHHHHHHHc
Confidence 788997654 46642 22235677766654
No 50
>1sql_A Dihydroneopterin aldolase; tetrahydrofolate biosynthesis, aldolase classes, retroaldol reaction, purin binding, schiff base, lyase; HET: GUN; 2.20A {Arabidopsis thaliana} SCOP: d.96.1.3
Probab=29.48 E-value=94 Score=19.70 Aligned_cols=42 Identities=17% Similarity=0.074 Sum_probs=31.7
Q ss_pred ecCCCCCCChHHHHHHHHHhhCCCCchhHHHHHHHHHHHHHH
Q psy4512 21 TDGVFDNVPDSLLLAELVRAQGSKDPMQLQLVANTIALMART 62 (101)
Q Consensus 21 SDGl~d~l~~~ei~~~l~~~~~~~~~~~~~~~a~~Lv~~A~~ 62 (101)
||-|-+.+.-.++.+.+.+......-.-.+.+|++|.+..+.
T Consensus 64 sDdl~~tvdY~~v~~~I~~~v~~~~f~LiE~lA~~Ia~~il~ 105 (146)
T 1sql_A 64 SDNLEDTISYVDIFSLAKEIVEGSPRNLLETVAELIASKTLE 105 (146)
T ss_dssp HCCGGGSCCHHHHHHHHHHHHTSSCCSCHHHHHHHHHHHHHH
T ss_pred ccCchhccCHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHH
Confidence 577778887788888888765333446688899999888874
No 51
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=28.99 E-value=87 Score=18.05 Aligned_cols=28 Identities=21% Similarity=0.315 Sum_probs=15.4
Q ss_pred ccCCCEEEEeecCCC-CCCChHHHHHHHHH
Q psy4512 11 VEDGDVILLATDGVF-DNVPDSLLLAELVR 39 (101)
Q Consensus 11 l~~gD~lvl~SDGl~-d~l~~~ei~~~l~~ 39 (101)
|++||+|+ .=+|.- ..++.+++..+++.
T Consensus 57 l~~GD~I~-~vng~~v~~~~~~~~~~~l~~ 85 (111)
T 2dlu_A 57 LQTGDHIL-KIGGTNVQGMTSEQVAQVLRN 85 (111)
T ss_dssp CCSSCEEE-EESSCCCTTSCHHHHHHHHHH
T ss_pred CCCCCEEE-EECCEECCCCCHHHHHHHHHh
Confidence 88899765 446642 22334555555543
No 52
>3oug_A Aspartate 1-decarboxylase; structural genomics, center for structural genomics of infec diseases, csgid, double-PSI beta barrel; HET: MSE; 1.55A {Francisella tularensis subsp} SCOP: b.52.2.0
Probab=28.71 E-value=30 Score=21.62 Aligned_cols=17 Identities=24% Similarity=0.370 Sum_probs=13.2
Q ss_pred eccCCCEEEEeecCCCC
Q psy4512 10 QVEDGDVILLATDGVFD 26 (101)
Q Consensus 10 ~l~~gD~lvl~SDGl~d 26 (101)
..++||.+|++|=+..+
T Consensus 81 ~~~~GD~vII~ay~~~~ 97 (114)
T 3oug_A 81 RCEIGDQLFIISYTQVD 97 (114)
T ss_dssp GCCTTCEEEEEEEEEEC
T ss_pred ccCCCCEEEEEECCcCC
Confidence 46899999999866554
No 53
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=28.59 E-value=58 Score=19.84 Aligned_cols=30 Identities=13% Similarity=0.266 Sum_probs=17.7
Q ss_pred eccCCCEEEEeecCCC-CCCChHHHHHHHHHh
Q psy4512 10 QVEDGDVILLATDGVF-DNVPDSLLLAELVRA 40 (101)
Q Consensus 10 ~l~~gD~lvl~SDGl~-d~l~~~ei~~~l~~~ 40 (101)
.|++||+|+ .-+|.- .+++.+++..+++..
T Consensus 83 ~L~~GD~Il-~ing~~v~~~~~~~~~~~l~~~ 113 (131)
T 1wfg_A 83 HLRPGDEVL-EWNGRLLQGATFEEVYNIILES 113 (131)
T ss_dssp CCCTTCEEE-EETTEECTTCCHHHHHHHHHHT
T ss_pred CCCCCCEEE-EECCEECCCCCHHHHHHHHHhc
Confidence 388999764 445542 234456666666553
No 54
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=28.58 E-value=64 Score=18.09 Aligned_cols=28 Identities=21% Similarity=0.370 Sum_probs=16.1
Q ss_pred ccCCCEEEEeecCCC-CCCChHHHHHHHHH
Q psy4512 11 VEDGDVILLATDGVF-DNVPDSLLLAELVR 39 (101)
Q Consensus 11 l~~gD~lvl~SDGl~-d~l~~~ei~~~l~~ 39 (101)
|++||+|+ .=+|.- .+++.+++..+++.
T Consensus 51 l~~GD~I~-~ing~~v~~~~~~~~~~~l~~ 79 (97)
T 2jil_A 51 IKPGDRLL-SVDGIRLLGTTHAEAMSILKQ 79 (97)
T ss_dssp CCTTCEEE-EETTEECSSCCHHHHHHHHHH
T ss_pred CCCCCEEE-EECCEECCCCCHHHHHHHHHc
Confidence 88999765 456631 22335666665554
No 55
>1v1c_A Obscurin; muscle, sarcomere, adapter, myogenesis, SH3-domain; NMR {Homo sapiens}
Probab=28.42 E-value=25 Score=20.12 Aligned_cols=17 Identities=18% Similarity=0.464 Sum_probs=13.5
Q ss_pred CCCccceeEeccCCCEE
Q psy4512 1 PECADTSQFQVEDGDVI 17 (101)
Q Consensus 1 p~~~d~~~~~l~~gD~l 17 (101)
|+..+..++.|+.||++
T Consensus 16 p~~~~~~ei~lk~Gd~V 32 (71)
T 1v1c_A 16 PLGAEQDAITLREGQYV 32 (71)
T ss_dssp CCSCCTTBCCBCTTCEE
T ss_pred ccCCCcceeeecCCCEE
Confidence 45566778899999996
No 56
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=27.92 E-value=78 Score=18.88 Aligned_cols=28 Identities=25% Similarity=0.393 Sum_probs=16.3
Q ss_pred ccCCCEEEEeecCC-CCCCChHHHHHHHHH
Q psy4512 11 VEDGDVILLATDGV-FDNVPDSLLLAELVR 39 (101)
Q Consensus 11 l~~gD~lvl~SDGl-~d~l~~~ei~~~l~~ 39 (101)
|++||+|+ .-+|. ..+++.+++..+++.
T Consensus 65 L~~GD~I~-~vng~~v~~~~~~~~~~~l~~ 93 (129)
T 2dmz_A 65 IQVNDKIV-AVDGVNIQGFANHDVVEVLRN 93 (129)
T ss_dssp CCSSCBEE-EETTBCCTTCCHHHHHHHHHH
T ss_pred CCCCCEEE-EECCEECCCCCHHHHHHHHHc
Confidence 88999765 44553 123335666666654
No 57
>2o90_A DHNA, dihydroneopterin aldolase; monapterin, drug design, atomic resolution, X-RAY crystallography, lyase; HET: NEU; 1.07A {Escherichia coli} PDB: 2o9m_A*
Probab=27.62 E-value=87 Score=19.01 Aligned_cols=42 Identities=17% Similarity=0.116 Sum_probs=31.0
Q ss_pred ecCCCCCCChHHHHHHHHHhhCCCCchhHHHHHHHHHHHHHH
Q psy4512 21 TDGVFDNVPDSLLLAELVRAQGSKDPMQLQLVANTIALMART 62 (101)
Q Consensus 21 SDGl~d~l~~~ei~~~l~~~~~~~~~~~~~~~a~~Lv~~A~~ 62 (101)
||-|-+.+.-.++.+.+.+..........+.+|++|.+..+.
T Consensus 44 sDdl~~tvdY~~v~~~i~~~v~~~~~~LiE~lA~~Ia~~~l~ 85 (122)
T 2o90_A 44 SDDVADCLSYADIAETVVSHVEGARFALVERVAEEVAELLLA 85 (122)
T ss_dssp HCCGGGSCCHHHHHHHHHHHHTTCEESCHHHHHHHHHHHHHH
T ss_pred ccccccccCHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHh
Confidence 566777787788888888765333346688899999988875
No 58
>1b9l_A Protein (epimerase); isomerase; 2.90A {Escherichia coli} SCOP: d.96.1.3
Probab=27.42 E-value=1.1e+02 Score=18.51 Aligned_cols=41 Identities=10% Similarity=0.160 Sum_probs=30.0
Q ss_pred ecCCCCCCChHHHHHHHHHhhCCCCchhHHHHHHHHHHHHH
Q psy4512 21 TDGVFDNVPDSLLLAELVRAQGSKDPMQLQLVANTIALMAR 61 (101)
Q Consensus 21 SDGl~d~l~~~ei~~~l~~~~~~~~~~~~~~~a~~Lv~~A~ 61 (101)
||-|-+.+.-.++.+.+.+........-.+.+|+++.+..+
T Consensus 48 sDdl~~tvdY~~v~~~i~~~v~~~~~~LiE~lA~~Ia~~~l 88 (120)
T 1b9l_A 48 SEDINDALNYRTVTKNIIQHVENNRFSLLEKLTQDVLDIAR 88 (120)
T ss_dssp GGTCSSCCCHHHHHHHHHHHHHTSEESCHHHHHHHHHHHHT
T ss_pred cCCcccccCHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHh
Confidence 68888888888888888765422233567889999987765
No 59
>1ypr_A Profilin; actin-binding protein, cytoskeleton; 2.30A {Saccharomyces cerevisiae} SCOP: d.110.1.1 PDB: 1k0k_A
Probab=27.30 E-value=98 Score=18.96 Aligned_cols=26 Identities=12% Similarity=0.201 Sum_probs=20.8
Q ss_pred CCCEEEEeecCCCCCCChHHHHHHHHHh
Q psy4512 13 DGDVILLATDGVFDNVPDSLLLAELVRA 40 (101)
Q Consensus 13 ~gD~lvl~SDGl~d~l~~~ei~~~l~~~ 40 (101)
.|+-+-..|+|+ +++.+|+..++..+
T Consensus 24 DG~svwA~s~~f--~~~~~E~~~i~~~f 49 (125)
T 1ypr_A 24 AGDAVWATSGGL--SLQPNEIGEIVQGF 49 (125)
T ss_dssp TSCCEEEEESCC--CCCHHHHHHHHHHT
T ss_pred CCCcEEEECCCC--ccCHHHHHHHHHhc
Confidence 666677788886 88999999888765
No 60
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=26.95 E-value=79 Score=18.87 Aligned_cols=29 Identities=28% Similarity=0.390 Sum_probs=18.5
Q ss_pred eccCCCEEEEeecCCC-C-CCChHHHHHHHHH
Q psy4512 10 QVEDGDVILLATDGVF-D-NVPDSLLLAELVR 39 (101)
Q Consensus 10 ~l~~gD~lvl~SDGl~-d-~l~~~ei~~~l~~ 39 (101)
.|++||+|+ .=+|.- . .++.+++..+++.
T Consensus 72 ~L~~GD~Il-~ing~~v~~~~~~~~~~~~l~~ 102 (128)
T 2db5_A 72 RLKENDQIL-AINHTPLDQNISHQQAIALLQQ 102 (128)
T ss_dssp CCCSSCBEE-EESSCBCSTTSCHHHHHHHHHH
T ss_pred CCCCCCEEE-EECCEECCCCCCHHHHHHHHHc
Confidence 388999765 456653 2 4566677766654
No 61
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=26.45 E-value=73 Score=17.75 Aligned_cols=29 Identities=14% Similarity=0.250 Sum_probs=17.1
Q ss_pred eccCCCEEEEeecCCC-CCCChHHHHHHHHH
Q psy4512 10 QVEDGDVILLATDGVF-DNVPDSLLLAELVR 39 (101)
Q Consensus 10 ~l~~gD~lvl~SDGl~-d~l~~~ei~~~l~~ 39 (101)
.|++||+|+- -+|.- ...+.+++..+++.
T Consensus 46 ~L~~GD~I~~-ing~~v~~~~~~~~~~~l~~ 75 (93)
T 3o46_A 46 LIHVGDELRE-VNGIPVEDKRPEEIIQILAQ 75 (93)
T ss_dssp CCCTTCEEEE-ETTEESTTSCHHHHHHHHHH
T ss_pred CCCCCCEEEE-ECCEECCCCCHHHHHHHHHh
Confidence 4888997644 45641 22455677666654
No 62
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=26.38 E-value=76 Score=17.83 Aligned_cols=28 Identities=14% Similarity=0.341 Sum_probs=16.1
Q ss_pred ccCCCEEEEeecCCC-CCCChHHHHHHHHH
Q psy4512 11 VEDGDVILLATDGVF-DNVPDSLLLAELVR 39 (101)
Q Consensus 11 l~~gD~lvl~SDGl~-d~l~~~ei~~~l~~ 39 (101)
|++||+|+ .=+|.- ..++.+++..+++.
T Consensus 55 L~~GD~I~-~ing~~v~~~~~~~~~~~l~~ 83 (96)
T 2ego_A 55 LTPGDTIA-SVNGLNVEGIRHREIVDIIKA 83 (96)
T ss_dssp CCTTCEEE-EETTEECTTCCHHHHHHHHHH
T ss_pred CCCCCEEE-EECCEECCCCCHHHHHHHHHh
Confidence 78899765 445632 23334666666654
No 63
>1pqh_A Aspartate 1-decarboxylase; pyruvoyl dependent decarboxylase, protein SELF-processing; 1.29A {Escherichia coli} SCOP: b.52.2.1 PDB: 1pqf_A 1pt1_A 1pt0_A 1pyq_A 1ppy_A 1pqe_A 1pyu_B 3tm7_B 1aw8_B 1pyu_A 3tm7_A 1aw8_A
Probab=25.83 E-value=35 Score=22.13 Aligned_cols=17 Identities=18% Similarity=0.298 Sum_probs=13.5
Q ss_pred eccCCCEEEEeecCCCC
Q psy4512 10 QVEDGDVILLATDGVFD 26 (101)
Q Consensus 10 ~l~~gD~lvl~SDGl~d 26 (101)
..++||.+|++|=+..+
T Consensus 95 l~~~GD~VII~sYa~~~ 111 (143)
T 1pqh_A 95 CASVGDIVIIASFVTMP 111 (143)
T ss_dssp TCCTTCEEEEEEEEEEE
T ss_pred cCCCCCEEEEEECccCC
Confidence 45799999999977654
No 64
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=25.52 E-value=58 Score=18.19 Aligned_cols=29 Identities=24% Similarity=0.190 Sum_probs=17.0
Q ss_pred eccCCCEEEEeecCCC-CCCChHHHHHHHHH
Q psy4512 10 QVEDGDVILLATDGVF-DNVPDSLLLAELVR 39 (101)
Q Consensus 10 ~l~~gD~lvl~SDGl~-d~l~~~ei~~~l~~ 39 (101)
.|++||.|+- =||.- ..++-+++.++++.
T Consensus 43 gL~~GD~I~~-Ing~~v~~~~~~~~~~~l~~ 72 (88)
T 1kwa_A 43 TLHVGDEIRE-INGISVANQTVEQLQKMLRE 72 (88)
T ss_dssp CCCTTCEEEE-ETTEEGGGSCHHHHHHHHHH
T ss_pred CCCCCCEEEE-ECCEECCCCCHHHHHHHHhc
Confidence 4788997654 46642 12345666666654
No 65
>3jx9_A Putative phosphoheptose isomerase; YP_001815198.1, structura genomics, joint center for structural genomics, JCSG; HET: MSE; 1.95A {Exiguobacterium sibiricum 255-15}
Probab=25.51 E-value=34 Score=22.53 Aligned_cols=13 Identities=23% Similarity=0.276 Sum_probs=10.5
Q ss_pred eccCCCEEEEeec
Q psy4512 10 QVEDGDVILLATD 22 (101)
Q Consensus 10 ~l~~gD~lvl~SD 22 (101)
.++++|++++.|-
T Consensus 74 ~i~~~D~vii~S~ 86 (170)
T 3jx9_A 74 TLHAVDRVLIFTP 86 (170)
T ss_dssp CCCTTCEEEEEES
T ss_pred CCCCCCEEEEEeC
Confidence 7899999877664
No 66
>3gt2_A Putative uncharacterized protein; P60 domain, antigen, unknown function; HET: EDO; 1.75A {Mycobacterium avium subsp}
Probab=25.34 E-value=26 Score=22.04 Aligned_cols=15 Identities=33% Similarity=0.727 Sum_probs=12.4
Q ss_pred eccCCCEEEEeecCC
Q psy4512 10 QVEDGDVILLATDGV 24 (101)
Q Consensus 10 ~l~~gD~lvl~SDGl 24 (101)
++++||+|++.+.|.
T Consensus 89 ~~~pGDlvff~~~~~ 103 (142)
T 3gt2_A 89 QARKGDLIFYGPEGT 103 (142)
T ss_dssp GCCTTCEEEESGGGC
T ss_pred hCCCCCEEEeCCCCC
Confidence 689999998877764
No 67
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=25.21 E-value=96 Score=18.03 Aligned_cols=30 Identities=27% Similarity=0.361 Sum_probs=17.1
Q ss_pred EeccCCCEEEEeecCCC-CCCChHHHHHHHHH
Q psy4512 9 FQVEDGDVILLATDGVF-DNVPDSLLLAELVR 39 (101)
Q Consensus 9 ~~l~~gD~lvl~SDGl~-d~l~~~ei~~~l~~ 39 (101)
.-|++||+|+ .=+|.- ..++-+++..+++.
T Consensus 60 agL~~GD~I~-~ing~~v~~~~~~~~~~~l~~ 90 (114)
T 1uew_A 60 AKLKVGDRIL-AVNGQSIINMPHADIVKLIKD 90 (114)
T ss_dssp SSCCTTCBEE-EETTBCTTTSCHHHHHHHHHH
T ss_pred CCCCCCCEEE-EECCEECCCCCHHHHHHHHHc
Confidence 3588999765 446631 22223666666654
No 68
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=25.02 E-value=82 Score=17.39 Aligned_cols=27 Identities=30% Similarity=0.326 Sum_probs=13.1
Q ss_pred ccCCCEEEEeecCCC-CCCChHHHHHHHH
Q psy4512 11 VEDGDVILLATDGVF-DNVPDSLLLAELV 38 (101)
Q Consensus 11 l~~gD~lvl~SDGl~-d~l~~~ei~~~l~ 38 (101)
|++||+|+ .=+|.- ..++.+++..+++
T Consensus 48 L~~GD~I~-~vng~~v~~~~~~~~~~~~~ 75 (92)
T 2qg1_A 48 LMQGDQIL-MVNGEDVRNATQEAVAALLK 75 (92)
T ss_dssp CCTTCEEE-EETTEECTTCCHHHHHHHHH
T ss_pred CCCCCEEE-EECCEECCCCCHHHHHHHHH
Confidence 77888654 345531 2233344444443
No 69
>1wie_A RIM binding protein 2; beta barrel, KIAA0318 protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=24.72 E-value=53 Score=18.96 Aligned_cols=15 Identities=7% Similarity=0.319 Sum_probs=11.6
Q ss_pred ceeEeccCCCEEEEe
Q psy4512 6 TSQFQVEDGDVILLA 20 (101)
Q Consensus 6 ~~~~~l~~gD~lvl~ 20 (101)
..++.++.||+|.+.
T Consensus 37 ~~eLsf~~Gd~i~v~ 51 (96)
T 1wie_A 37 EAELPLTAGKYLYVY 51 (96)
T ss_dssp TTBCCCCTTCEEEEE
T ss_pred CCeeeECCCCEEEEe
Confidence 457788999997655
No 70
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=24.68 E-value=66 Score=19.14 Aligned_cols=29 Identities=14% Similarity=0.160 Sum_probs=16.9
Q ss_pred ccCCCEEEEeecCCC-CCCChHHHHHHHHHh
Q psy4512 11 VEDGDVILLATDGVF-DNVPDSLLLAELVRA 40 (101)
Q Consensus 11 l~~gD~lvl~SDGl~-d~l~~~ei~~~l~~~ 40 (101)
|++||+|+- -+|.- .+++-+++.++++..
T Consensus 64 L~~GD~I~~-ing~~v~~~~~~~~~~~l~~~ 93 (122)
T 1v5q_A 64 LQIGDRVMA-INGIPTEDSTFEEANQLLRDS 93 (122)
T ss_dssp CCTTCCEEE-ETTEESSSSCHHHHHHHHHHH
T ss_pred CCCCCEEEE-ECCEECCCCCHHHHHHHHHhC
Confidence 889997654 45631 223356666666543
No 71
>3r2e_A Dihydroneopterin aldolase; structural genomics, IDP90567, center for structural genomic infectious diseases, csgid, bifunctional; 2.15A {Yersinia pestis}
Probab=24.65 E-value=1.1e+02 Score=19.41 Aligned_cols=42 Identities=19% Similarity=0.196 Sum_probs=29.2
Q ss_pred ecCCCCCCChHHHHHHHHHhhCCCCchhHHHHHHHHHHHHHH
Q psy4512 21 TDGVFDNVPDSLLLAELVRAQGSKDPMQLQLVANTIALMART 62 (101)
Q Consensus 21 SDGl~d~l~~~ei~~~l~~~~~~~~~~~~~~~a~~Lv~~A~~ 62 (101)
||-|-+.+.-.++.+.+.+......-...+.+|++|.+..+.
T Consensus 68 sDdl~~tvdY~~v~~~I~~~v~~~~f~LlE~LAe~Ia~~ll~ 109 (143)
T 3r2e_A 68 SDDVNDCLSYADISEAVIQHVGSQRFALVERVAEEVAELLLR 109 (143)
T ss_dssp CCCTTSSCCHHHHHHHHHHHHHSSEESCHHHHHHHHHHHHHH
T ss_pred ccccccccCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHH
Confidence 566777777678888877654222335678888888888874
No 72
>2k1g_A Lipoprotein SPR; solution structure, bacterial lipoprotein, cysteine PEPT NPLC/P60 family, construct optimized, membrane, palmitate; NMR {Escherichia coli}
Probab=24.64 E-value=30 Score=21.90 Aligned_cols=15 Identities=20% Similarity=0.507 Sum_probs=11.7
Q ss_pred EeccCCCEEEEeecC
Q psy4512 9 FQVEDGDVILLATDG 23 (101)
Q Consensus 9 ~~l~~gD~lvl~SDG 23 (101)
-++++||+|++-+.|
T Consensus 66 ~~l~pGDLvFf~~~~ 80 (135)
T 2k1g_A 66 SNLRTGDLVLFRAGS 80 (135)
T ss_dssp GGCCTTEEEEEEETT
T ss_pred HHccCCcEEEECCCC
Confidence 468999998887654
No 73
>2if6_A Hypothetical protein YIIX; structural genomics, metalloprotein, PSI-2, PR structure initiative, NEW YORK SGX research center for STRU genomics; 1.80A {Escherichia coli} SCOP: d.3.1.21
Probab=24.60 E-value=34 Score=22.31 Aligned_cols=15 Identities=27% Similarity=0.574 Sum_probs=10.5
Q ss_pred EeccCCCEEEEeecC
Q psy4512 9 FQVEDGDVILLATDG 23 (101)
Q Consensus 9 ~~l~~gD~lvl~SDG 23 (101)
-+|++||+|+.-+.+
T Consensus 3 ~~l~~GDlvf~~~~~ 17 (186)
T 2if6_A 3 WQPQTGDIIFQISRS 17 (186)
T ss_dssp CCCCTTCEEEECCCS
T ss_pred ccCCCCCEEEEEcCC
Confidence 357888888776643
No 74
>2c45_A Aspartate 1-decarboxylase precursor; double-PSI beta barrel, lyase, zymogen, pantothenate biosynthesis, pyruvate; 2.99A {Mycobacterium tuberculosis}
Probab=24.54 E-value=39 Score=21.83 Aligned_cols=21 Identities=29% Similarity=0.488 Sum_probs=15.8
Q ss_pred eccCCCEEEEeecCCCCCCChHHH
Q psy4512 10 QVEDGDVILLATDGVFDNVPDSLL 33 (101)
Q Consensus 10 ~l~~gD~lvl~SDGl~d~l~~~ei 33 (101)
..++||.+|++|=+..+ ++|+
T Consensus 78 l~~~GD~vII~aYa~~~---~~E~ 98 (139)
T 2c45_A 78 LVHPGDLVILIAYATMD---DARA 98 (139)
T ss_dssp TSCTTCEEEEEECCEEE---HHHH
T ss_pred cCCCCCEEEEEECCcCC---HHHh
Confidence 46799999999977654 4554
No 75
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=24.50 E-value=66 Score=19.18 Aligned_cols=28 Identities=21% Similarity=0.235 Sum_probs=15.9
Q ss_pred ccCCCEEEEeecCCC-CCCChHHHHHHHHH
Q psy4512 11 VEDGDVILLATDGVF-DNVPDSLLLAELVR 39 (101)
Q Consensus 11 l~~gD~lvl~SDGl~-d~l~~~ei~~~l~~ 39 (101)
|++||+|+ .=+|.- ..++.+++..+++.
T Consensus 63 L~~GD~Il-~Vng~~v~~~~~~~~~~~l~~ 91 (123)
T 1ueq_A 63 METGDVIV-YINEVCVLGHTHADVVKLFQS 91 (123)
T ss_dssp CCTTCEEE-EETTEECTTSCHHHHHHHHHT
T ss_pred CCCCCEEE-EECCEECCCCCHHHHHHHHHh
Confidence 78888754 445531 22345666666654
No 76
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=24.43 E-value=81 Score=17.64 Aligned_cols=28 Identities=21% Similarity=0.324 Sum_probs=15.5
Q ss_pred ccCCCEEEEeecCCC-CCCChHHHHHHHHH
Q psy4512 11 VEDGDVILLATDGVF-DNVPDSLLLAELVR 39 (101)
Q Consensus 11 l~~gD~lvl~SDGl~-d~l~~~ei~~~l~~ 39 (101)
|++||+|+ .=||.- ..++..++..+++.
T Consensus 56 L~~GD~I~-~ing~~v~~~~~~~~~~~l~~ 84 (98)
T 1ihj_A 56 LKVGDRIL-SLNGKDVRNSTEQAVIDLIKE 84 (98)
T ss_dssp CCTTCEEE-EETTEECTTCCHHHHHHHHHH
T ss_pred CCCCCEEE-EECCEECCCCCHHHHHHHHhc
Confidence 88999755 456642 23333555555543
No 77
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=24.17 E-value=78 Score=17.32 Aligned_cols=28 Identities=18% Similarity=0.364 Sum_probs=15.7
Q ss_pred ccCCCEEEEeecCCC-CCCChHHHHHHHHH
Q psy4512 11 VEDGDVILLATDGVF-DNVPDSLLLAELVR 39 (101)
Q Consensus 11 l~~gD~lvl~SDGl~-d~l~~~ei~~~l~~ 39 (101)
|++||+|+ .=+|.- .+++.+++..+++.
T Consensus 44 L~~GD~I~-~ing~~v~~~~~~~~~~~l~~ 72 (87)
T 2pa1_A 44 LRPGDIIV-AINGESAEGMLHAEAQSKIRQ 72 (87)
T ss_dssp CCTTCEEE-EETTEESTTCCHHHHHHHHHT
T ss_pred CCCCCEEE-EECCEECCCCCHHHHHHHHHc
Confidence 78999754 456631 22224566666553
No 78
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=24.12 E-value=75 Score=17.84 Aligned_cols=28 Identities=14% Similarity=0.284 Sum_probs=16.2
Q ss_pred ccCCCEEEEeecCCC-CCCChHHHHHHHHH
Q psy4512 11 VEDGDVILLATDGVF-DNVPDSLLLAELVR 39 (101)
Q Consensus 11 l~~gD~lvl~SDGl~-d~l~~~ei~~~l~~ 39 (101)
|++||+|+ .-+|.- ..++.+++..+++.
T Consensus 51 l~~GD~I~-~ing~~v~~~~~~~~~~~l~~ 79 (98)
T 2jxo_A 51 LRAQDRIV-EVNGVCMEGKQHGDVVSAIRA 79 (98)
T ss_dssp CCTTCEEE-EETTEECTTCCHHHHHHHHHT
T ss_pred CCCCCEEE-EECCEECCCCCHHHHHHHHHh
Confidence 78899754 446631 22335666666654
No 79
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=23.94 E-value=79 Score=18.08 Aligned_cols=28 Identities=11% Similarity=0.211 Sum_probs=15.4
Q ss_pred ccCCCEEEEeecCCC-CCCChHHHHHHHHH
Q psy4512 11 VEDGDVILLATDGVF-DNVPDSLLLAELVR 39 (101)
Q Consensus 11 l~~gD~lvl~SDGl~-d~l~~~ei~~~l~~ 39 (101)
|++||+|+ .=+|.- .++...++..+++.
T Consensus 63 L~~GD~Il-~ing~~v~~~~~~~~~~~i~~ 91 (107)
T 3nfk_A 63 LNEGDQVV-LINGRDIAEHTHDQVVLFIKA 91 (107)
T ss_dssp CCTTCEEE-EETTEECTTCCHHHHHHHHHC
T ss_pred cCCCCEEE-EECCEECCCCCHHHHHHHHHh
Confidence 88999755 446642 23344555555543
No 80
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=23.91 E-value=88 Score=17.88 Aligned_cols=28 Identities=25% Similarity=0.393 Sum_probs=14.6
Q ss_pred ccCCCEEEEeecCCC-CCCChHHHHHHHHH
Q psy4512 11 VEDGDVILLATDGVF-DNVPDSLLLAELVR 39 (101)
Q Consensus 11 l~~gD~lvl~SDGl~-d~l~~~ei~~~l~~ 39 (101)
|++||+|+ .-+|.- .+++.+++..+++.
T Consensus 59 L~~GD~I~-~ing~~v~~~~~~~~~~~l~~ 87 (104)
T 1wi2_A 59 LQEGDQVL-AVNDVDFQDIEHSKAVEILKT 87 (104)
T ss_dssp CCTTCEEE-EETTEECSSCCHHHHHHHHHH
T ss_pred CCCCCEEE-EECCEECCCCCHHHHHHHHhC
Confidence 77888654 445531 22334555555543
No 81
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=23.79 E-value=77 Score=17.20 Aligned_cols=28 Identities=18% Similarity=0.281 Sum_probs=15.2
Q ss_pred ccCCCEEEEeecCCC-CCCChHHHHHHHHH
Q psy4512 11 VEDGDVILLATDGVF-DNVPDSLLLAELVR 39 (101)
Q Consensus 11 l~~gD~lvl~SDGl~-d~l~~~ei~~~l~~ 39 (101)
|++||+|+ .-||.- ..++.+++.++++.
T Consensus 44 l~~GD~I~-~vng~~v~~~~~~~~~~~l~~ 72 (85)
T 2i04_A 44 METGDVIV-SVNDTCVLGHTHAQVVKIFQS 72 (85)
T ss_dssp CCTTCEEE-EETTEECTTCCHHHHHHHHHT
T ss_pred CCCCCEEE-EECCEECCCCCHHHHHHHHHh
Confidence 88999765 456642 12234555555543
No 82
>3p42_A Predicted protein; beta-grAsp, unknown function; HET: MSE; 1.91A {Escherichia coli O127}
Probab=23.79 E-value=69 Score=22.03 Aligned_cols=32 Identities=9% Similarity=0.253 Sum_probs=21.6
Q ss_pred eEeccCCCEEEEeecCC-C-CCCC--hHHHHHHHHH
Q psy4512 8 QFQVEDGDVILLATDGV-F-DNVP--DSLLLAELVR 39 (101)
Q Consensus 8 ~~~l~~gD~lvl~SDGl-~-d~l~--~~ei~~~l~~ 39 (101)
..++.|||.|++-.|.- | +-+. +++|.++|..
T Consensus 189 ~~~l~PG~~I~Vp~~~~~~~~~~~~Ln~~I~~lLa~ 224 (236)
T 3p42_A 189 HVEPPPGSQLWLGFSAHVLPEKYADLNDQIVSVLTQ 224 (236)
T ss_dssp CEECCTTCEEEECBCTTTSCGGGTTHHHHHHHHHHT
T ss_pred CCCCCCCCEEEEeCCcccccccHHHHHHHHHHHHHh
Confidence 45799999999988873 2 3222 3677777654
No 83
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=23.13 E-value=82 Score=17.34 Aligned_cols=28 Identities=11% Similarity=0.268 Sum_probs=15.8
Q ss_pred ccCCCEEEEeecCCC-CCCChHHHHHHHHH
Q psy4512 11 VEDGDVILLATDGVF-DNVPDSLLLAELVR 39 (101)
Q Consensus 11 l~~gD~lvl~SDGl~-d~l~~~ei~~~l~~ 39 (101)
|++||+|+ .-||.- ..++..++..+++.
T Consensus 45 L~~GD~I~-~ing~~v~~~~~~~~~~~l~~ 73 (91)
T 1g9o_A 45 LLAGDRLV-EVNGENVEKETHQQVVSRIRA 73 (91)
T ss_dssp CCTTCEEE-EETTEECTTCCHHHHHHHHHT
T ss_pred CCCCCEEE-EECCEECCCCCHHHHHHHHHc
Confidence 78899744 556642 23344566655553
No 84
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=23.05 E-value=1.2e+02 Score=18.32 Aligned_cols=28 Identities=14% Similarity=0.272 Sum_probs=17.2
Q ss_pred ccCCCEEEEeecCC-CCCCChHHHHHHHHH
Q psy4512 11 VEDGDVILLATDGV-FDNVPDSLLLAELVR 39 (101)
Q Consensus 11 l~~gD~lvl~SDGl-~d~l~~~ei~~~l~~ 39 (101)
|++||+|+- =+|. ...++.+++..+++.
T Consensus 83 L~~GD~Il~-Vng~~v~~~~~~~~~~~l~~ 111 (132)
T 3l4f_D 83 LRMGDFLIE-VNGQNVVKVGHRQVVNMIRQ 111 (132)
T ss_dssp CCTTCEEEE-ESSSBCTTSCHHHHHHHHHH
T ss_pred CCCCCEEEE-ECCEECCCCCHHHHHHHHHc
Confidence 889997654 4664 233455666666654
No 85
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=23.02 E-value=71 Score=19.25 Aligned_cols=29 Identities=17% Similarity=0.226 Sum_probs=16.8
Q ss_pred eccCCCEEEEeecCCC-CCCChHHHHHHHHH
Q psy4512 10 QVEDGDVILLATDGVF-DNVPDSLLLAELVR 39 (101)
Q Consensus 10 ~l~~gD~lvl~SDGl~-d~l~~~ei~~~l~~ 39 (101)
.|+.||+|+ .=||.- ..++.+++..+++.
T Consensus 73 ~L~~GD~Il-~Vng~~v~~~~~~~~~~~l~~ 102 (127)
T 1wg6_A 73 RLRMNDQLI-AVNGETLLGKSNHEAMETLRR 102 (127)
T ss_dssp TSCSCCBEE-EETTEESTTSCHHHHHHHHHH
T ss_pred CCCCCCEEE-EECCEECCCCCHHHHHHHHHH
Confidence 488999765 556641 23444566655553
No 86
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=22.87 E-value=1.2e+02 Score=17.65 Aligned_cols=29 Identities=17% Similarity=0.396 Sum_probs=16.6
Q ss_pred eccCCCEEEEeecCCC-CCCChHHHHHHHHH
Q psy4512 10 QVEDGDVILLATDGVF-DNVPDSLLLAELVR 39 (101)
Q Consensus 10 ~l~~gD~lvl~SDGl~-d~l~~~ei~~~l~~ 39 (101)
.|++||+|+ .-+|.- ..+...++...++.
T Consensus 62 gL~~GD~I~-~Vng~~v~~~~~~~~~~~l~~ 91 (117)
T 2csj_A 62 LLQENDRVV-MVNGTPMEDVLHSFAVQQLRK 91 (117)
T ss_dssp HBCTTCEEE-EESSCBCBTCCHHHHHHHHHH
T ss_pred cCCCCCEEE-EECCEECCCcCHHHHHHHHhc
Confidence 488999764 456642 23444555555543
No 87
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=22.79 E-value=92 Score=17.78 Aligned_cols=27 Identities=22% Similarity=0.298 Sum_probs=14.7
Q ss_pred ccCCCEEEEeecCCC-CCCChHHHHHHHH
Q psy4512 11 VEDGDVILLATDGVF-DNVPDSLLLAELV 38 (101)
Q Consensus 11 l~~gD~lvl~SDGl~-d~l~~~ei~~~l~ 38 (101)
|++||+|+- -+|.- .+++..++..+++
T Consensus 57 L~~GD~I~~-vng~~v~~~~~~~~~~~l~ 84 (105)
T 1wha_A 57 LQVGDRVLS-INGVDVTEARHDHAVSLLT 84 (105)
T ss_dssp CCTTCEEEE-ESSCBCTTCCHHHHHHHHT
T ss_pred CCCCCEEEE-ECCEECCCCCHHHHHHHHH
Confidence 889997654 45532 2233455554443
No 88
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=22.75 E-value=1.2e+02 Score=17.65 Aligned_cols=29 Identities=10% Similarity=0.221 Sum_probs=16.2
Q ss_pred eccCCCEEEEeecCCC-CCCChHHHHHHHHH
Q psy4512 10 QVEDGDVILLATDGVF-DNVPDSLLLAELVR 39 (101)
Q Consensus 10 ~l~~gD~lvl~SDGl~-d~l~~~ei~~~l~~ 39 (101)
-|++||+|+ .-+|.- ..+...++..+++.
T Consensus 60 GL~~GD~Il-~ing~~v~~~~~~~~~~~~~~ 89 (119)
T 2cs5_A 60 RLNEGDQVV-LINGRDIAEHTHDQVVLFIKA 89 (119)
T ss_dssp CCCTTCEEE-EETTBCTTSSCHHHHHHHHHH
T ss_pred CCCCCCEEE-EECCEECCCCCHHHHHHHHHh
Confidence 688999765 446632 22344555555543
No 89
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=22.71 E-value=82 Score=16.67 Aligned_cols=27 Identities=22% Similarity=0.428 Sum_probs=14.9
Q ss_pred ccCCCEEEEeecCCC-CCCChHHHHHHHH
Q psy4512 11 VEDGDVILLATDGVF-DNVPDSLLLAELV 38 (101)
Q Consensus 11 l~~gD~lvl~SDGl~-d~l~~~ei~~~l~ 38 (101)
|++||+|+ .-+|.- ..++.+++..+++
T Consensus 40 l~~GD~I~-~ing~~v~~~~~~~~~~~l~ 67 (81)
T 2rcz_A 40 IQEGDVVL-KINGTVTENMSLTDAKTLIE 67 (81)
T ss_dssp CCTTCEEE-EETTEECTTCCHHHHHHHHH
T ss_pred CCCCCEEE-EECCEECCCCCHHHHHHHHH
Confidence 88999765 446631 2224455555554
No 90
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=22.34 E-value=91 Score=18.69 Aligned_cols=28 Identities=18% Similarity=0.374 Sum_probs=16.2
Q ss_pred ccCCCEEEEeecCCC-CCCChHHHHHHHHH
Q psy4512 11 VEDGDVILLATDGVF-DNVPDSLLLAELVR 39 (101)
Q Consensus 11 l~~gD~lvl~SDGl~-d~l~~~ei~~~l~~ 39 (101)
|++||+|+ .-+|.- ..++.+++..+++.
T Consensus 78 L~~GD~Il-~Vng~~v~~~~~~~~~~~l~~ 106 (123)
T 2iwq_A 78 LKPGDRIV-EVDGMDLRDASHEQAVEAIRK 106 (123)
T ss_dssp CCTTCEEE-EETTEECTTCCHHHHHHHHHH
T ss_pred CCCCCEEE-EECCEECCCCCHHHHHHHHHc
Confidence 88899765 456632 22334666666554
No 91
>4aey_A D-erythro-7,8-dihydroneopterin triphosphate epime; isomerase, pteridine biosynthesis; 3.00A {Pseudomonas aeruginosa}
Probab=22.30 E-value=1.5e+02 Score=19.02 Aligned_cols=42 Identities=7% Similarity=0.063 Sum_probs=24.1
Q ss_pred eecCCCCCCChHHHHHHHHHhhCCCCchhHHHHHHHHHHHHH
Q psy4512 20 ATDGVFDNVPDSLLLAELVRAQGSKDPMQLQLVANTIALMAR 61 (101)
Q Consensus 20 ~SDGl~d~l~~~ei~~~l~~~~~~~~~~~~~~~a~~Lv~~A~ 61 (101)
.||-|-+.+.-.++.+.+.+........-.+.+|++|.+..+
T Consensus 83 ~sDdL~dTvdY~~v~~~I~~~v~~~~f~LIEtLAe~Ia~~ll 124 (156)
T 4aey_A 83 EVNDIEHALNYRTITKAIIRHVEENRFALLERMTQEILDLVM 124 (156)
T ss_dssp ------CCCHHHHHHHHHHHHHHTSEESCHHHHHHHHHHHHH
T ss_pred ccCcchhccCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHH
Confidence 466776777667777777665422233567888999988665
No 92
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=22.24 E-value=87 Score=18.54 Aligned_cols=27 Identities=22% Similarity=0.276 Sum_probs=14.8
Q ss_pred ccCCCEEEEeecCCC-CCCChHHHHHHHH
Q psy4512 11 VEDGDVILLATDGVF-DNVPDSLLLAELV 38 (101)
Q Consensus 11 l~~gD~lvl~SDGl~-d~l~~~ei~~~l~ 38 (101)
|++||+|+ .-+|.- ..++.+++...++
T Consensus 73 L~~GD~Il-~Vng~~v~~~~~~~~~~~l~ 100 (117)
T 2byg_A 73 LQVGDRLL-MVNNYSLEEVTHEEAVAILK 100 (117)
T ss_dssp CCTTCEEE-EETTEECTTCCHHHHHHHHH
T ss_pred CCCCCEEE-EECCEECCCCCHHHHHHHHH
Confidence 88999765 445531 2234455555544
No 93
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=22.21 E-value=86 Score=18.82 Aligned_cols=29 Identities=17% Similarity=0.263 Sum_probs=17.2
Q ss_pred ccCCCEEEEeecCCC-CCCChHHHHHHHHHh
Q psy4512 11 VEDGDVILLATDGVF-DNVPDSLLLAELVRA 40 (101)
Q Consensus 11 l~~gD~lvl~SDGl~-d~l~~~ei~~~l~~~ 40 (101)
|++||+|+ .-+|.- .+++.+++..+++..
T Consensus 62 L~~GD~Il-~vng~~v~~~~~~~~~~~l~~~ 91 (129)
T 2kpk_A 62 METGDVIV-SVNDTCVLGHTHAQVVKIFQSI 91 (129)
T ss_dssp CCTTCEEE-EETTEECTTSCHHHHHHHHHHS
T ss_pred CCCCCEEE-EECCEECCCCCHHHHHHHHHhC
Confidence 88899765 456642 223446666666553
No 94
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=22.08 E-value=66 Score=17.85 Aligned_cols=28 Identities=29% Similarity=0.445 Sum_probs=16.0
Q ss_pred ccCCCEEEEeecCCC-CCCChHHHHHHHHH
Q psy4512 11 VEDGDVILLATDGVF-DNVPDSLLLAELVR 39 (101)
Q Consensus 11 l~~gD~lvl~SDGl~-d~l~~~ei~~~l~~ 39 (101)
|++||+|+ .=||.- ..++.+++..+++.
T Consensus 45 l~~GD~I~-~ing~~v~~~~~~~~~~~l~~ 73 (91)
T 2vsp_A 45 LEDEDVII-EVNGVNVLDEPYEKVVDRIQS 73 (91)
T ss_dssp CCTTCEEE-EETTEECTTSCHHHHHHHHTT
T ss_pred CCCCCEEE-EECCEECCCCCHHHHHHHHHc
Confidence 78899754 445632 22355666666543
No 95
>1n3y_A Integrin alpha-X; alpha/beta rossmann fold, cell adhesion; 1.65A {Homo sapiens} SCOP: c.62.1.1
Probab=21.92 E-value=1.1e+02 Score=19.05 Aligned_cols=24 Identities=13% Similarity=0.206 Sum_probs=15.4
Q ss_pred EEEEeecCCCC--CCChHHHHHHHHH
Q psy4512 16 VILLATDGVFD--NVPDSLLLAELVR 39 (101)
Q Consensus 16 ~lvl~SDGl~d--~l~~~ei~~~l~~ 39 (101)
++||.|||... .....++.+.++.
T Consensus 113 ~iillTDG~~~~~~~~~~~~~~~~~~ 138 (198)
T 1n3y_A 113 ILIVITDGKKEGDSLDYKDVIPMADA 138 (198)
T ss_dssp EEEEEESSCCBSCSSCHHHHHHHHHH
T ss_pred EEEEECCCCCCCCcccHHHHHHHHHH
Confidence 58999999975 2333555555543
No 96
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=21.79 E-value=1.2e+02 Score=17.18 Aligned_cols=29 Identities=17% Similarity=0.165 Sum_probs=16.6
Q ss_pred eccCCCEEEEeecCCCC-CCChHHHHHHHHH
Q psy4512 10 QVEDGDVILLATDGVFD-NVPDSLLLAELVR 39 (101)
Q Consensus 10 ~l~~gD~lvl~SDGl~d-~l~~~ei~~~l~~ 39 (101)
.|++||+|+- =+|.-= ..+-+++.++++.
T Consensus 55 gl~~GD~I~~-Ing~~v~~~~~~~~~~~l~~ 84 (101)
T 2yt7_A 55 ALSIGDRLTA-INGTSLVGLPLAACQAAVRE 84 (101)
T ss_dssp SCCTTCEEEE-ESSCBCTTSCHHHHHHHHHH
T ss_pred CCCCCCEEEE-ECCEECCCCCHHHHHHHHHh
Confidence 4788887654 466421 1345666666654
No 97
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=21.77 E-value=68 Score=17.72 Aligned_cols=27 Identities=11% Similarity=0.291 Sum_probs=14.0
Q ss_pred ccCCCEEEEeecCCC-CCCChHHHHHHHH
Q psy4512 11 VEDGDVILLATDGVF-DNVPDSLLLAELV 38 (101)
Q Consensus 11 l~~gD~lvl~SDGl~-d~l~~~ei~~~l~ 38 (101)
|++||+|+ .-+|.- ..++.+++..+++
T Consensus 46 l~~GD~I~-~ing~~v~~~~~~~~~~~l~ 73 (90)
T 2he4_A 46 LRAQDRLI-EVNGQNVEGLRHAEVVASIK 73 (90)
T ss_dssp CCTTCEEE-EETTEECTTSCHHHHHHHHT
T ss_pred CCCCCEEE-EECCEECCCCCHHHHHHHHH
Confidence 78888754 445531 2223355555554
No 98
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=21.58 E-value=96 Score=17.37 Aligned_cols=27 Identities=30% Similarity=0.252 Sum_probs=13.3
Q ss_pred ccCCCEEEEeecCCC-CCCChHHHHHHHH
Q psy4512 11 VEDGDVILLATDGVF-DNVPDSLLLAELV 38 (101)
Q Consensus 11 l~~gD~lvl~SDGl~-d~l~~~ei~~~l~ 38 (101)
|++||+|+ .-+|.- ...+.+++..+++
T Consensus 49 l~~GD~I~-~vng~~v~~~~~~~~~~~l~ 76 (97)
T 1n7e_A 49 IHIGDRIL-AINSSSLKGKPLSEAIHLLQ 76 (97)
T ss_dssp CCTTCEEE-EETTEECTTCCHHHHHHHHH
T ss_pred CCCCCEEE-EECCEECCCCCHHHHHHHHH
Confidence 78888654 445532 1123344444443
No 99
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=21.35 E-value=1.2e+02 Score=17.63 Aligned_cols=28 Identities=21% Similarity=0.373 Sum_probs=15.8
Q ss_pred eccCCCEEEEeecCCC-CCCChHHHHHHHH
Q psy4512 10 QVEDGDVILLATDGVF-DNVPDSLLLAELV 38 (101)
Q Consensus 10 ~l~~gD~lvl~SDGl~-d~l~~~ei~~~l~ 38 (101)
.|++||+|+ .=+|.- .+++..++..+++
T Consensus 43 ~L~~GD~Il-~Ing~~v~~~~~~~~~~~~~ 71 (106)
T 2la8_A 43 KLQRGDIIT-KFNGDALEGLPFQVCYALFK 71 (106)
T ss_dssp TCCTTCEEE-EESSCBCSSSCHHHHHHHHH
T ss_pred CCCCCCEEE-EECCEECCCCCHHHHHHHHh
Confidence 388999765 456642 2345455554443
No 100
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=21.05 E-value=95 Score=17.31 Aligned_cols=28 Identities=21% Similarity=0.410 Sum_probs=15.4
Q ss_pred ccCCCEEEEeecCCC-CCCChHHHHHHHHH
Q psy4512 11 VEDGDVILLATDGVF-DNVPDSLLLAELVR 39 (101)
Q Consensus 11 l~~gD~lvl~SDGl~-d~l~~~ei~~~l~~ 39 (101)
|++||+|+ .=||.- .+++..++..+++.
T Consensus 48 L~~GD~I~-~ing~~v~~~~~~~~~~~l~~ 76 (94)
T 1vb7_A 48 LRPGDIIV-AINGQSAENMLHAEAQSKIRQ 76 (94)
T ss_dssp CCTTCEEE-EETTEECTTCCHHHHHHHHHT
T ss_pred CCCCCEEE-EECCEECCCCCHHHHHHHHHh
Confidence 78899754 556632 22333566555543
No 101
>3o1k_A Dihydroneopterin aldolase FOLB, putative; structural genomics, center for structural genomics of infec diseases, csgid; 1.95A {Vibrio cholerae o1 biovar el tor}
Probab=21.04 E-value=96 Score=19.20 Aligned_cols=42 Identities=17% Similarity=0.154 Sum_probs=29.2
Q ss_pred ecCCCCCCChHHHHHHHHHhhCCCCchhHHHHHHHHHHHHHH
Q psy4512 21 TDGVFDNVPDSLLLAELVRAQGSKDPMQLQLVANTIALMART 62 (101)
Q Consensus 21 SDGl~d~l~~~ei~~~l~~~~~~~~~~~~~~~a~~Lv~~A~~ 62 (101)
||-|-+.+.-.++.+.+.+..........+.+|++|.+..+.
T Consensus 59 sDdl~~tvdY~~v~~~I~~~v~~~~~~LiE~lA~~Ia~~ll~ 100 (132)
T 3o1k_A 59 SDDVADALDYAQVSQAVLEHIEQGRFLLVERVAEEVAELIMT 100 (132)
T ss_dssp HCCGGGSCCHHHHHHHHHHHHHTCEESCHHHHHHHHHHHHHH
T ss_pred ccccccccCHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHH
Confidence 566677777678887777654222345678889988888874
No 102
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=21.02 E-value=94 Score=17.55 Aligned_cols=28 Identities=18% Similarity=0.374 Sum_probs=15.9
Q ss_pred ccCCCEEEEeecCCC-CCCChHHHHHHHHH
Q psy4512 11 VEDGDVILLATDGVF-DNVPDSLLLAELVR 39 (101)
Q Consensus 11 l~~gD~lvl~SDGl~-d~l~~~ei~~~l~~ 39 (101)
|++||+|+ .-||.- .+++.+++..+++.
T Consensus 58 l~~GD~I~-~ing~~v~~~~~~~~~~~l~~ 86 (103)
T 2fcf_A 58 LKPGDRIV-EVDGMDLRDASHEQAVEAIRK 86 (103)
T ss_dssp CCTTCEEE-EETTEECTTCCHHHHHHHHHT
T ss_pred CCCCCEEE-EECCEECCCCCHHHHHHHHHh
Confidence 88899755 456632 22335566665543
No 103
>3v9o_A Dihydroneopterin aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: GUN; 1.45A {Burkholderia thailandensis}
Probab=20.92 E-value=1.6e+02 Score=18.41 Aligned_cols=40 Identities=13% Similarity=0.074 Sum_probs=26.3
Q ss_pred cCCCCCCChHHHHHHHHHhhCCCCchhHHHHHHHHHHHHH
Q psy4512 22 DGVFDNVPDSLLLAELVRAQGSKDPMQLQLVANTIALMAR 61 (101)
Q Consensus 22 DGl~d~l~~~ei~~~l~~~~~~~~~~~~~~~a~~Lv~~A~ 61 (101)
|-|-+.+.-.++.+.+.+..........+.+|++|.+..+
T Consensus 67 Ddl~~tvdY~~v~~~I~~~v~~~~~~LlE~lAe~Ia~~il 106 (143)
T 3v9o_A 67 DKLREVVDYDLMKQSVAQCVARGHIHLQETLCDAIAASLL 106 (143)
T ss_dssp CCGGGSCCTHHHHHHHHHHHHTCCCCSHHHHHHHHHHHHH
T ss_pred ccchhccCHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHH
Confidence 3344445557787777765432334678889999998887
No 104
>1jo0_A Hypothetical protein HI1333; structural genomics, YHBY_HAEI structure 2 function project, S2F, unknown function; 1.37A {Haemophilus influenzae} SCOP: d.68.4.1 PDB: 1ln4_A
Probab=20.82 E-value=1.1e+02 Score=18.19 Aligned_cols=44 Identities=23% Similarity=0.310 Sum_probs=29.8
Q ss_pred EEEEeecCCCCCCChHHHHHHHHHhh------CCCCchhHHHHHHHHHHHH
Q psy4512 16 VILLATDGVFDNVPDSLLLAELVRAQ------GSKDPMQLQLVANTIALMA 60 (101)
Q Consensus 16 ~lvl~SDGl~d~l~~~ei~~~l~~~~------~~~~~~~~~~~a~~Lv~~A 60 (101)
+|.++-+||++++- .+|...+.... ...+..+.+++|+.|.+..
T Consensus 21 vv~IGk~GlT~~vi-~ei~~aL~~~ELIKVkvl~~~~~~~~e~a~~la~~t 70 (98)
T 1jo0_A 21 VVMLGGNGLTEGVL-AEIENALNHHELIKVKVAGADRETKQLIINAIVRET 70 (98)
T ss_dssp SEEECTTCSCHHHH-HHHHHHHHHHSEEEEEETTCCHHHHHHHHHHHHHHH
T ss_pred eEEECCCCCCHHHH-HHHHHHHHHCCeEEEEEeCCCHHHHHHHHHHHHHHh
Confidence 58889999988763 34555555442 1234567888899888776
No 105
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=20.69 E-value=1e+02 Score=17.00 Aligned_cols=13 Identities=46% Similarity=0.803 Sum_probs=9.0
Q ss_pred ccCCCEEEEeecCC
Q psy4512 11 VEDGDVILLATDGV 24 (101)
Q Consensus 11 l~~gD~lvl~SDGl 24 (101)
|++||+|+ .-+|.
T Consensus 52 l~~GD~I~-~vng~ 64 (97)
T 2iwn_A 52 IQIGDQII-AVDGT 64 (97)
T ss_dssp CCTTCEEE-EETTE
T ss_pred CCCCCEEE-EECCE
Confidence 88999764 44663
No 106
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=20.61 E-value=1.4e+02 Score=17.53 Aligned_cols=28 Identities=29% Similarity=0.281 Sum_probs=13.7
Q ss_pred eccCCCEEEEeecCCC-CCCChHHHHHHHH
Q psy4512 10 QVEDGDVILLATDGVF-DNVPDSLLLAELV 38 (101)
Q Consensus 10 ~l~~gD~lvl~SDGl~-d~l~~~ei~~~l~ 38 (101)
.|++||.|+ .=||.- .+++-+++.++++
T Consensus 61 gL~~GD~Il-~Ing~~v~~~~~~~~~~~l~ 89 (118)
T 1v6b_A 61 GVVKGDEIM-AINGKIVTDYTLAEAEAALQ 89 (118)
T ss_dssp SSCTTCEEE-EESSCBCTTCBHHHHHHHHH
T ss_pred CCCCCCEEE-EECCEECCCCCHHHHHHHHH
Confidence 467788654 445642 1222344444444
No 107
>2jyx_A Lipoprotein SPR; solution structure, construct optimized, membrane, palmitate, structural genomics, PSI-2, protein structure initiative; NMR {Escherichia coli K12} PDB: 2k1g_A
Probab=20.59 E-value=37 Score=21.14 Aligned_cols=14 Identities=21% Similarity=0.610 Sum_probs=11.1
Q ss_pred eccCCCEEEEeecC
Q psy4512 10 QVEDGDVILLATDG 23 (101)
Q Consensus 10 ~l~~gD~lvl~SDG 23 (101)
++++||+|++.+.+
T Consensus 67 ~l~pGDLvff~~~~ 80 (136)
T 2jyx_A 67 NLRTGDLVLFRAGS 80 (136)
T ss_dssp TCCTTEEEEEECSS
T ss_pred hCCCCCEEEECCCC
Confidence 67899998887654
No 108
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=20.56 E-value=1.1e+02 Score=17.36 Aligned_cols=28 Identities=25% Similarity=0.401 Sum_probs=15.9
Q ss_pred ccCCCEEEEeecCCC-CCCChHHHHHHHHH
Q psy4512 11 VEDGDVILLATDGVF-DNVPDSLLLAELVR 39 (101)
Q Consensus 11 l~~gD~lvl~SDGl~-d~l~~~ei~~~l~~ 39 (101)
|++||+|+ .=+|.- .+++.+++..+++.
T Consensus 61 l~~GD~I~-~ing~~v~~~~~~~~~~~l~~ 89 (107)
T 3qe1_A 61 VRKGDRIL-EVNGVNVEGATHKQVVDLIRA 89 (107)
T ss_dssp CCTTCEEE-EETTEECTTCCHHHHHHHHHH
T ss_pred CCCCCEEE-EECCEECCCCCHHHHHHHHHc
Confidence 78888754 446632 23345666666553
No 109
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=20.53 E-value=91 Score=17.62 Aligned_cols=28 Identities=14% Similarity=0.071 Sum_probs=16.7
Q ss_pred ccCCCEEEEeecCCC-CCCChHHHHHHHHH
Q psy4512 11 VEDGDVILLATDGVF-DNVPDSLLLAELVR 39 (101)
Q Consensus 11 l~~gD~lvl~SDGl~-d~l~~~ei~~~l~~ 39 (101)
|+.||+ |+.=+|.. ..++.+++.+++++
T Consensus 41 l~~GD~-Il~VNG~~v~~~~~~evv~llr~ 69 (82)
T 1r6j_A 41 LLTEHN-ICEINGQNVIGLKDSQIADILST 69 (82)
T ss_dssp CCSSEE-EEEETTEECTTCCHHHHHHHHHH
T ss_pred CCCCCE-EEEECCEEcCCCCHHHHHHHHhc
Confidence 567776 45556652 23455777777763
No 110
>1dgw_Y Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_Y
Probab=20.45 E-value=65 Score=19.10 Aligned_cols=13 Identities=23% Similarity=0.521 Sum_probs=9.0
Q ss_pred ceeEeccCCCEEE
Q psy4512 6 TSQFQVEDGDVIL 18 (101)
Q Consensus 6 ~~~~~l~~gD~lv 18 (101)
...-+|++||+++
T Consensus 5 ~~~~~l~~G~v~v 17 (93)
T 1dgw_Y 5 RYAATLSEGDIIV 17 (93)
T ss_dssp EEEEEECTTCEEE
T ss_pred hhhceecCCcEEE
Confidence 3456788888765
No 111
>1mhn_A SurviVal motor neuron protein; SMN, SMA, spinal muscular atrophy, RNA binding protein; 1.80A {Homo sapiens} SCOP: b.34.9.1 PDB: 4a4e_A* 4a4g_A*
Probab=20.43 E-value=55 Score=17.26 Aligned_cols=17 Identities=29% Similarity=0.272 Sum_probs=11.8
Q ss_pred eccCCCEEEEe-e-cCCCC
Q psy4512 10 QVEDGDVILLA-T-DGVFD 26 (101)
Q Consensus 10 ~l~~gD~lvl~-S-DGl~d 26 (101)
.++.||.++.- | ||.|-
T Consensus 3 ~~~~G~~c~A~~s~Dg~wY 21 (59)
T 1mhn_A 3 QWKVGDKCSAIWSEDGCIY 21 (59)
T ss_dssp CCCTTCEEEEECTTTSCEE
T ss_pred cCCcCCEEEEEECCCCCEE
Confidence 46789986554 5 88874
No 112
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=20.30 E-value=1e+02 Score=17.06 Aligned_cols=27 Identities=15% Similarity=0.076 Sum_probs=14.1
Q ss_pred ccCCCEEEEeecCCC-CCCChHHHHHHHH
Q psy4512 11 VEDGDVILLATDGVF-DNVPDSLLLAELV 38 (101)
Q Consensus 11 l~~gD~lvl~SDGl~-d~l~~~ei~~~l~ 38 (101)
|++||+|+ .-+|.- .+++..++..+++
T Consensus 42 l~~GD~I~-~vng~~v~~~~~~~~~~~l~ 69 (91)
T 2f5y_A 42 LQQLDTVL-QLNERPVEHWKCVELAHEIR 69 (91)
T ss_dssp CCTTCEEE-EETTEECTTCCHHHHHHHHH
T ss_pred CCCCCEEE-EECCEECCCCCHHHHHHHHH
Confidence 78888754 446631 1223355555544
No 113
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=20.27 E-value=1.2e+02 Score=17.12 Aligned_cols=28 Identities=21% Similarity=0.286 Sum_probs=16.5
Q ss_pred ccCCCEEEEeecCCCC-CCChHHHHHHHHH
Q psy4512 11 VEDGDVILLATDGVFD-NVPDSLLLAELVR 39 (101)
Q Consensus 11 l~~gD~lvl~SDGl~d-~l~~~ei~~~l~~ 39 (101)
|++||+|+ .-+|.-= ..+..++..+++.
T Consensus 49 L~~GD~Il-~Ing~~v~~~~~~~~~~~l~~ 77 (90)
T 1y7n_A 49 VRVGHRII-EINGQSVVATPHEKIVHILSN 77 (90)
T ss_dssp CCSSCEEE-EETTEECTTSCHHHHHHHHHH
T ss_pred CCCCCEEE-EECCEECCCCCHHHHHHHHHc
Confidence 78898765 4566421 2355666666653
No 114
>1shu_X Anthrax toxin receptor 2; alpha/beta rossmann fold, membrane protein; 1.50A {Homo sapiens} SCOP: c.62.1.1 PDB: 1tzn_a 1sht_X 1t6b_Y*
Probab=20.21 E-value=1e+02 Score=18.95 Aligned_cols=13 Identities=38% Similarity=0.698 Sum_probs=10.3
Q ss_pred CEEEEeecCCCCC
Q psy4512 15 DVILLATDGVFDN 27 (101)
Q Consensus 15 D~lvl~SDGl~d~ 27 (101)
-++|+.|||..+.
T Consensus 105 ~~iiliTDG~~~~ 117 (182)
T 1shu_X 105 SIIIALTDGKLDG 117 (182)
T ss_dssp EEEEEEECCCCCT
T ss_pred eEEEEECCCCcCC
Confidence 4689999998653
Done!