BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4514
(64 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1BA1|A Chain A, Heat-Shock Cognate 70kd Protein 44kd Atpase N-Terminal
Mutant With Cys 17 Replaced By Lys
Length = 386
Score = 32.0 bits (71), Expect = 0.097, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 8/54 (14%)
Query: 1 MSVDLGSEWMKVAIVSPGVPMEIALNKESKRKTPTLVAFHKGNSGTDICDKLIG 54
+ +DLG+ + KV + G +EI N + R TP+ VAF TD ++LIG
Sbjct: 7 VGIDLGTTYSKVGVFQHG-KVEIIANDQGNRTTPSYVAF------TDT-ERLIG 52
>pdb|3QFP|A Chain A, Crystal Structure Of Yeast Hsp70 (BipKAR2) ATPASE DOMAIN
pdb|3QML|A Chain A, The Structural Analysis Of Sil1-Bip Complex Reveals The
Mechanism For Sil1 To Function As A Novel Nucleotide
Exchange Factor
pdb|3QML|B Chain B, The Structural Analysis Of Sil1-Bip Complex Reveals The
Mechanism For Sil1 To Function As A Novel Nucleotide
Exchange Factor
Length = 390
Score = 30.0 bits (66), Expect = 0.34, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 1 MSVDLGSEWMKVAIVSPGVPMEIALNKESKRKTPTLVAF 39
+ +DLG+ + VA++ G EI N++ R TP+ VAF
Sbjct: 17 IGIDLGTTYSCVAVMKNG-KTEILANEQGNRITPSYVAF 54
>pdb|3QFU|A Chain A, Crystal Structure Of Yeast Hsp70 (BipKAR2) COMPLEXED
WITH ADP
Length = 394
Score = 30.0 bits (66), Expect = 0.34, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 1 MSVDLGSEWMKVAIVSPGVPMEIALNKESKRKTPTLVAF 39
+ +DLG+ + VA++ G EI N++ R TP+ VAF
Sbjct: 21 IGIDLGTTYSCVAVMKNG-KTEILANEQGNRITPSYVAF 58
>pdb|1BUP|A Chain A, T13s Mutant Of Bovine 70 Kilodalton Heat Shock Protein
Length = 386
Score = 29.6 bits (65), Expect = 0.42, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 8/54 (14%)
Query: 1 MSVDLGSEWMKVAIVSPGVPMEIALNKESKRKTPTLVAFHKGNSGTDICDKLIG 54
+ +DLGS + V + G +EI N + R TP+ VAF TD ++LIG
Sbjct: 7 VGIDLGSTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAF------TDT-ERLIG 52
>pdb|1HJO|A Chain A, Atpase Domain Of Human Heat Shock 70kda Protein 1
Length = 380
Score = 28.9 bits (63), Expect = 0.77, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 8/54 (14%)
Query: 1 MSVDLGSEWMKVAIVSPGVPMEIALNKESKRKTPTLVAFHKGNSGTDICDKLIG 54
+ +DLG+ + V + G +EI N + R TP+ VAF TD ++LIG
Sbjct: 5 IGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAF------TDT-ERLIG 50
>pdb|3A8Y|A Chain A, Crystal Structure Of The Complex Between The Bag5 Bd5
And Hsp70 Nbd
pdb|3A8Y|B Chain B, Crystal Structure Of The Complex Between The Bag5 Bd5
And Hsp70 Nbd
pdb|3ATU|A Chain A, Crystal Structure Of Human Hsp70 Nbd In The Adp- And Mg
Ion-Bound State
pdb|3ATV|A Chain A, Crystal Structure Of Human Hsp70 Nbd In The Adp-Bound
And Mg Ion-Free State
pdb|3AY9|A Chain A, Crystal Structure Of Human Hsp70 Nbd In The Adp-, Mg
Ion-, And K Ion- Bound State
Length = 392
Score = 28.9 bits (63), Expect = 0.77, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 8/54 (14%)
Query: 1 MSVDLGSEWMKVAIVSPGVPMEIALNKESKRKTPTLVAFHKGNSGTDICDKLIG 54
+ +DLG+ + V + G +EI N + R TP+ VAF TD ++LIG
Sbjct: 11 IGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAF------TDT-ERLIG 56
>pdb|3JXU|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein
1a (Hsp70-1) Atpase Domain In Complex With Adp And
Inorganic Phosphate
Length = 409
Score = 28.9 bits (63), Expect = 0.77, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 8/54 (14%)
Query: 1 MSVDLGSEWMKVAIVSPGVPMEIALNKESKRKTPTLVAFHKGNSGTDICDKLIG 54
+ +DLG+ + V + G +EI N + R TP+ VAF TD ++LIG
Sbjct: 29 IGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAF------TDT-ERLIG 74
>pdb|3GDQ|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein
1-Like Atpase Domain In Complex With Adp And Inorganic
Phosphate
Length = 408
Score = 28.9 bits (63), Expect = 0.77, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 8/54 (14%)
Query: 1 MSVDLGSEWMKVAIVSPGVPMEIALNKESKRKTPTLVAFHKGNSGTDICDKLIG 54
+ +DLG+ + V + G +EI N + R TP+ VAF TD ++LIG
Sbjct: 31 IGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAF------TDT-ERLIG 76
>pdb|3D2F|B Chain B, Crystal Structure Of A Complex Of Sse1p And Hsp70
pdb|3D2F|D Chain D, Crystal Structure Of A Complex Of Sse1p And Hsp70
Length = 382
Score = 28.9 bits (63), Expect = 0.77, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 8/54 (14%)
Query: 1 MSVDLGSEWMKVAIVSPGVPMEIALNKESKRKTPTLVAFHKGNSGTDICDKLIG 54
+ +DLG+ + V + G +EI N + R TP+ VAF TD ++LIG
Sbjct: 7 IGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAF------TDT-ERLIG 52
>pdb|3D2E|B Chain B, Crystal Structure Of A Complex Of Sse1p And Hsp70,
Selenomethionine- Labeled Crystals
pdb|3D2E|D Chain D, Crystal Structure Of A Complex Of Sse1p And Hsp70,
Selenomethionine- Labeled Crystals
Length = 382
Score = 28.9 bits (63), Expect = 0.77, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 8/54 (14%)
Query: 1 MSVDLGSEWMKVAIVSPGVPMEIALNKESKRKTPTLVAFHKGNSGTDICDKLIG 54
+ +DLG+ + V + G +EI N + R TP+ VAF TD ++LIG
Sbjct: 7 IGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAF------TDT-ERLIG 52
>pdb|2E8A|A Chain A, Crystal Structure Of The Human Hsp70 Atpase Domain In
Complex With Amp-Pnp
Length = 391
Score = 28.9 bits (63), Expect = 0.77, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 8/54 (14%)
Query: 1 MSVDLGSEWMKVAIVSPGVPMEIALNKESKRKTPTLVAFHKGNSGTDICDKLIG 54
+ +DLG+ + V + G +EI N + R TP+ VAF TD ++LIG
Sbjct: 10 IGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAF------TDT-ERLIG 55
>pdb|2E88|A Chain A, Crystal Structure Of The Human Hsp70 Atpase Domain In
The Apo Form
Length = 391
Score = 28.9 bits (63), Expect = 0.77, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 8/54 (14%)
Query: 1 MSVDLGSEWMKVAIVSPGVPMEIALNKESKRKTPTLVAFHKGNSGTDICDKLIG 54
+ +DLG+ + V + G +EI N + R TP+ VAF TD ++LIG
Sbjct: 10 IGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAF------TDT-ERLIG 55
>pdb|2V7Y|A Chain A, Crystal Structure Of The Molecular Chaperone Dnak From
Geobacillus Kaustophilus Hta426 In Post-Atp Hydrolysis
State
pdb|4ANI|C Chain C, Structural Basis For The Intermolecular Communication
Between Dnak And Grpe In The Dnak Chaperone System From
Geobacillus Kaustophilus Hta426
pdb|4ANI|D Chain D, Structural Basis For The Intermolecular Communication
Between Dnak And Grpe In The Dnak Chaperone System From
Geobacillus Kaustophilus Hta426
pdb|4ANI|G Chain G, Structural Basis For The Intermolecular Communication
Between Dnak And Grpe In The Dnak Chaperone System From
Geobacillus Kaustophilus Hta426
pdb|4ANI|H Chain H, Structural Basis For The Intermolecular Communication
Between Dnak And Grpe In The Dnak Chaperone System From
Geobacillus Kaustophilus Hta426
Length = 509
Score = 28.9 bits (63), Expect = 0.78, Method: Composition-based stats.
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 1 MSVDLGSEWMKVAIVSPGVPMEIALNKESKRKTPTLVAFHKG 42
+ +DLG+ VA++ G +++ N E R TP++VAF G
Sbjct: 5 IGIDLGTTNSCVAVLEGG-EVKVIPNPEGNRTTPSVVAFKNG 45
>pdb|3GL1|A Chain A, Crystal Structure Of Atpase Domain Of Ssb1 Chaperone, A
Member Of The Hsp70 Family, From Saccharomyces
Cerevisiae
pdb|3GL1|B Chain B, Crystal Structure Of Atpase Domain Of Ssb1 Chaperone, A
Member Of The Hsp70 Family, From Saccharomyces
Cerevisiae
Length = 387
Score = 28.9 bits (63), Expect = 0.79, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Query: 1 MSVDLGSEWMKVAIVSPGVPMEIALNKESKRKTPTLVAF 39
+ +DLG+ + VA V EI N++ R TP+ VAF
Sbjct: 13 IGIDLGTTYSCVATYESSV--EIIANEQGNRVTPSFVAF 49
>pdb|4FSV|A Chain A, Crystal Structure Of A Heat Shock 70kda Protein 2
(Hspa2) From Homo Sapiens At 1.80 A Resolution
Length = 387
Score = 28.9 bits (63), Expect = 0.82, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 1 MSVDLGSEWMKVAIVSPGVPMEIALNKESKRKTPTLVAF 39
+ +DLG+ + V + G +EI N + R TP+ VAF
Sbjct: 8 IGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAF 45
>pdb|3I33|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein
2 (Hsp70-2) Atpase Domain In Complex With Adp And
Inorganic Phosphate
Length = 404
Score = 28.9 bits (63), Expect = 0.82, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 1 MSVDLGSEWMKVAIVSPGVPMEIALNKESKRKTPTLVAF 39
+ +DLG+ + V + G +EI N + R TP+ VAF
Sbjct: 26 IGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAF 63
>pdb|1NGD|A Chain A, Structural Basis Of The 70-kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 28.5 bits (62), Expect = 0.87, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 8/54 (14%)
Query: 1 MSVDLGSEWMKVAIVSPGVPMEIALNKESKRKTPTLVAFHKGNSGTDICDKLIG 54
+ +DLG+ + V + G +EI N + R TP+ VAF TD ++LIG
Sbjct: 7 VGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAF------TDT-ERLIG 52
>pdb|1NGF|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 28.5 bits (62), Expect = 0.87, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 8/54 (14%)
Query: 1 MSVDLGSEWMKVAIVSPGVPMEIALNKESKRKTPTLVAFHKGNSGTDICDKLIG 54
+ +DLG+ + V + G +EI N + R TP+ VAF TD ++LIG
Sbjct: 7 VGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAF------TDT-ERLIG 52
>pdb|1KAX|A Chain A, 70kd Heat Shock Cognate Protein Atpase Domain, K71m
Mutant
Length = 381
Score = 28.5 bits (62), Expect = 0.87, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 8/54 (14%)
Query: 1 MSVDLGSEWMKVAIVSPGVPMEIALNKESKRKTPTLVAFHKGNSGTDICDKLIG 54
+ +DLG+ + V + G +EI N + R TP+ VAF TD ++LIG
Sbjct: 7 VGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAF------TDT-ERLIG 52
>pdb|1ATS|A Chain A, Threonine 204 Of The Chaperone Protein Hsc70 Influences
The Structure Of The Active Site But Is Not Essential
For Atp Hydrolysis
Length = 386
Score = 28.5 bits (62), Expect = 0.87, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 8/54 (14%)
Query: 1 MSVDLGSEWMKVAIVSPGVPMEIALNKESKRKTPTLVAFHKGNSGTDICDKLIG 54
+ +DLG+ + V + G +EI N + R TP+ VAF TD ++LIG
Sbjct: 7 VGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAF------TDT-ERLIG 52
>pdb|1NGA|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 28.5 bits (62), Expect = 0.87, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 8/54 (14%)
Query: 1 MSVDLGSEWMKVAIVSPGVPMEIALNKESKRKTPTLVAFHKGNSGTDICDKLIG 54
+ +DLG+ + V + G +EI N + R TP+ VAF TD ++LIG
Sbjct: 7 VGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAF------TDT-ERLIG 52
>pdb|1KAZ|A Chain A, 70kd Heat Shock Cognate Protein Atpase Domain, K71e
Mutant
Length = 381
Score = 28.5 bits (62), Expect = 0.87, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 8/54 (14%)
Query: 1 MSVDLGSEWMKVAIVSPGVPMEIALNKESKRKTPTLVAFHKGNSGTDICDKLIG 54
+ +DLG+ + V + G +EI N + R TP+ VAF TD ++LIG
Sbjct: 7 VGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAF------TDT-ERLIG 52
>pdb|1QQM|A Chain A, D199s Mutant Of Bovine 70 Kilodalton Heat Shock Protein
Length = 378
Score = 28.5 bits (62), Expect = 0.87, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 8/54 (14%)
Query: 1 MSVDLGSEWMKVAIVSPGVPMEIALNKESKRKTPTLVAFHKGNSGTDICDKLIG 54
+ +DLG+ + V + G +EI N + R TP+ VAF TD ++LIG
Sbjct: 4 VGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAF------TDT-ERLIG 49
>pdb|1NGB|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 28.5 bits (62), Expect = 0.87, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 8/54 (14%)
Query: 1 MSVDLGSEWMKVAIVSPGVPMEIALNKESKRKTPTLVAFHKGNSGTDICDKLIG 54
+ +DLG+ + V + G +EI N + R TP+ VAF TD ++LIG
Sbjct: 7 VGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAF------TDT-ERLIG 52
>pdb|1ATR|A Chain A, Threonine 204 Of The Chaperone Protein Hsc70 Influences
The Structure Of The Active Site But Is Not Essential
For Atp Hydrolysis
Length = 386
Score = 28.5 bits (62), Expect = 0.87, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 8/54 (14%)
Query: 1 MSVDLGSEWMKVAIVSPGVPMEIALNKESKRKTPTLVAFHKGNSGTDICDKLIG 54
+ +DLG+ + V + G +EI N + R TP+ VAF TD ++LIG
Sbjct: 7 VGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAF------TDT-ERLIG 52
>pdb|1KAY|A Chain A, 70kd Heat Shock Cognate Protein Atpase Domain, K71a
Mutant
Length = 381
Score = 28.5 bits (62), Expect = 0.87, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 8/54 (14%)
Query: 1 MSVDLGSEWMKVAIVSPGVPMEIALNKESKRKTPTLVAFHKGNSGTDICDKLIG 54
+ +DLG+ + V + G +EI N + R TP+ VAF TD ++LIG
Sbjct: 7 VGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAF------TDT-ERLIG 52
>pdb|3FZF|A Chain A, Crystal Structure Of Hsc70BAG1 IN COMPLEX WITH ATP
pdb|3FZH|A Chain A, Crystal Structures Of Hsc70BAG1 IN COMPLEX WITH SMALL
Molecule Inhibitors
pdb|3FZK|A Chain A, Crystal Structures Of Hsc70BAG1 IN COMPLEX WITH SMALL
Molecule Inhibitors
pdb|3FZL|A Chain A, Crystal Structures Of Hsc70BAG1 IN COMPLEX WITH SMALL
Molecule Inhibitors
pdb|3FZM|A Chain A, Crystal Structures Of Hsc70BAG1 IN COMPLEX WITH SMALL
Molecule Inhibitors
pdb|3LDQ|A Chain A, Crystal Structure Of Hsc70BAG1 IN COMPLEX WITH SMALL
MOLECULE Inhibitor
pdb|3M3Z|A Chain A, Crystal Structure Of Hsc70/bag1 In Complex With Small
Molecule Inhibitor
Length = 381
Score = 28.5 bits (62), Expect = 0.87, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 8/54 (14%)
Query: 1 MSVDLGSEWMKVAIVSPGVPMEIALNKESKRKTPTLVAFHKGNSGTDICDKLIG 54
+ +DLG+ + V + G +EI N + R TP+ VAF TD ++LIG
Sbjct: 7 VGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAF------TDT-ERLIG 52
>pdb|3CQX|A Chain A, Chaperone Complex
pdb|3CQX|B Chain B, Chaperone Complex
Length = 386
Score = 28.5 bits (62), Expect = 0.87, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 8/54 (14%)
Query: 1 MSVDLGSEWMKVAIVSPGVPMEIALNKESKRKTPTLVAFHKGNSGTDICDKLIG 54
+ +DLG+ + V + G +EI N + R TP+ VAF TD ++LIG
Sbjct: 12 VGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAF------TDT-ERLIG 57
>pdb|2QWN|A Chain A, Crystal Structure Of Disulfide-Bond-Crosslinked Complex
Of Bovine Hsc70 (1-386aa)r171c And Bovine Auxilin
(810-910aa)d876c In The AdpPi State
pdb|2QWO|A Chain A, Crystal Structure Of Disulfide-Bond-Crosslinked Complex
Of Bovine Hsc70 (1-394aa)r171c And Bovine Auxilin
(810-910aa)d876c In The AdpPi Form #1
pdb|2QWP|A Chain A, Crystal Structure Of Disulfide-Bond-Crosslinked Complex
Of Bovine Hsc70 (1-394aa)r171c And Bovine Auxilin
(810-910aa)d876c In The AdpPi Form #2
pdb|2QWQ|A Chain A, Crystal Structure Of Disulfide-Bond-Crosslinked Complex
Of Bovine Hsc70 (1-394aa)r171c And Bovine Auxilin
(810-910aa)d876c In The Amppnp Hydrolyzed Form
pdb|2QWR|A Chain A, Crystal Structure Of Disulfide-Bond-Crosslinked Complex
Of Bovine Hsc70 (1-394aa)r171c And Bovine Auxilin
(810-910aa)d876c In The Amppnp Intact Form
Length = 394
Score = 28.5 bits (62), Expect = 0.87, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 8/54 (14%)
Query: 1 MSVDLGSEWMKVAIVSPGVPMEIALNKESKRKTPTLVAFHKGNSGTDICDKLIG 54
+ +DLG+ + V + G +EI N + R TP+ VAF TD ++LIG
Sbjct: 7 VGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAF------TDT-ERLIG 52
>pdb|2QW9|A Chain A, Crystal Structure Of Bovine Hsc70 (1-394aa)in The Apo
State
pdb|2QW9|B Chain B, Crystal Structure Of Bovine Hsc70 (1-394aa)in The Apo
State
pdb|2QWL|A Chain A, Crystal Structure Of Bovine Hsc70 (1-394aa)in The Adp
State
pdb|2QWL|B Chain B, Crystal Structure Of Bovine Hsc70 (1-394aa)in The Adp
State
pdb|2QWM|A Chain A, Crystal Structure Of Bovine Hsc70 (1-394aa)in The AdpVi
State
pdb|2QWM|B Chain B, Crystal Structure Of Bovine Hsc70 (1-394aa)in The AdpVi
State
Length = 394
Score = 28.5 bits (62), Expect = 0.87, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 8/54 (14%)
Query: 1 MSVDLGSEWMKVAIVSPGVPMEIALNKESKRKTPTLVAFHKGNSGTDICDKLIG 54
+ +DLG+ + V + G +EI N + R TP+ VAF TD ++LIG
Sbjct: 7 VGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAF------TDT-ERLIG 52
>pdb|1BA0|A Chain A, Heat-Shock Cognate 70kd Protein 44kd Atpase N-Terminal
1nge 3
Length = 386
Score = 28.5 bits (62), Expect = 0.87, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 8/54 (14%)
Query: 1 MSVDLGSEWMKVAIVSPGVPMEIALNKESKRKTPTLVAFHKGNSGTDICDKLIG 54
+ +DLG+ + V + G +EI N + R TP+ VAF TD ++LIG
Sbjct: 7 VGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAF------TDT-ERLIG 52
>pdb|1HPM|A Chain A, How Potassium Affects The Activity Of The Molecular
Chaperone Hsc70. Ii. Potassium Binds Specifically In
The Atpase Active Site
pdb|1NGI|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
pdb|1NGJ|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
pdb|3HSC|A Chain A, Three-Dimensional Structure Of The Atpase Fragment Of A
70k Heat-Shock Cognate Protein
Length = 386
Score = 28.5 bits (62), Expect = 0.87, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 8/54 (14%)
Query: 1 MSVDLGSEWMKVAIVSPGVPMEIALNKESKRKTPTLVAFHKGNSGTDICDKLIG 54
+ +DLG+ + V + G +EI N + R TP+ VAF TD ++LIG
Sbjct: 7 VGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAF------TDT-ERLIG 52
>pdb|1HX1|A Chain A, Crystal Structure Of A Bag Domain In Complex With The
Hsc70 Atpase Domain
Length = 400
Score = 28.5 bits (62), Expect = 0.87, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 8/54 (14%)
Query: 1 MSVDLGSEWMKVAIVSPGVPMEIALNKESKRKTPTLVAFHKGNSGTDICDKLIG 54
+ +DLG+ + V + G +EI N + R TP+ VAF TD ++LIG
Sbjct: 26 VGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAF------TDT-ERLIG 71
>pdb|1QQN|A Chain A, D206s Mutant Of Bovine 70 Kilodalton Heat Shock Protein
Length = 378
Score = 28.5 bits (62), Expect = 0.87, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 8/54 (14%)
Query: 1 MSVDLGSEWMKVAIVSPGVPMEIALNKESKRKTPTLVAFHKGNSGTDICDKLIG 54
+ +DLG+ + V + G +EI N + R TP+ VAF TD ++LIG
Sbjct: 4 VGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAF------TDT-ERLIG 49
>pdb|1NGC|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 28.5 bits (62), Expect = 0.87, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 8/54 (14%)
Query: 1 MSVDLGSEWMKVAIVSPGVPMEIALNKESKRKTPTLVAFHKGNSGTDICDKLIG 54
+ +DLG+ + V + G +EI N + R TP+ VAF TD ++LIG
Sbjct: 7 VGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAF------TDT-ERLIG 52
>pdb|1QQO|A Chain A, E175s Mutant Of Bovine 70 Kilodalton Heat Shock Protein
Length = 378
Score = 28.5 bits (62), Expect = 0.87, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 8/54 (14%)
Query: 1 MSVDLGSEWMKVAIVSPGVPMEIALNKESKRKTPTLVAFHKGNSGTDICDKLIG 54
+ +DLG+ + V + G +EI N + R TP+ VAF TD ++LIG
Sbjct: 4 VGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAF------TDT-ERLIG 49
>pdb|1NGE|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 28.5 bits (62), Expect = 0.87, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 8/54 (14%)
Query: 1 MSVDLGSEWMKVAIVSPGVPMEIALNKESKRKTPTLVAFHKGNSGTDICDKLIG 54
+ +DLG+ + V + G +EI N + R TP+ VAF TD ++LIG
Sbjct: 7 VGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAF------TDT-ERLIG 52
>pdb|1YUW|A Chain A, Crystal Structure Of Bovine Hsc70(Aa1-554)e213aD214A
MUTANT
Length = 554
Score = 28.5 bits (62), Expect = 1.00, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 1 MSVDLGSEWMKVAIVSPGVPMEIALNKESKRKTPTLVAF 39
+ +DLG+ + V + G +EI N + R TP+ VAF
Sbjct: 7 VGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAF 44
>pdb|3C7N|B Chain B, Structure Of The Hsp110:hsc70 Nucleotide Exchange
Complex
Length = 554
Score = 28.5 bits (62), Expect = 1.00, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 1 MSVDLGSEWMKVAIVSPGVPMEIALNKESKRKTPTLVAF 39
+ +DLG+ + V + G +EI N + R TP+ VAF
Sbjct: 7 VGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAF 44
>pdb|2V7Z|A Chain A, Crystal Structure Of The 70-Kda Heat Shock Cognate
Protein From Rattus Norvegicus In Post-Atp Hydrolysis
State
pdb|2V7Z|B Chain B, Crystal Structure Of The 70-Kda Heat Shock Cognate
Protein From Rattus Norvegicus In Post-Atp Hydrolysis
State
Length = 543
Score = 28.5 bits (62), Expect = 1.00, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 1 MSVDLGSEWMKVAIVSPGVPMEIALNKESKRKTPTLVAF 39
+ +DLG+ + V + G +EI N + R TP+ VAF
Sbjct: 7 VGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAF 44
>pdb|3FE1|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein
6 (Hsp70b') Atpase Domain In Complex With Adp And
Inorganic Phosphate
pdb|3FE1|B Chain B, Crystal Structure Of The Human 70kda Heat Shock Protein
6 (Hsp70b') Atpase Domain In Complex With Adp And
Inorganic Phosphate
pdb|3FE1|C Chain C, Crystal Structure Of The Human 70kda Heat Shock Protein
6 (Hsp70b') Atpase Domain In Complex With Adp And
Inorganic Phosphate
Length = 403
Score = 28.5 bits (62), Expect = 1.0, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 1 MSVDLGSEWMKVAIVSPGVPMEIALNKESKRKTPTLVAF 39
+ +DLG+ + V + G +EI N + R TP+ VAF
Sbjct: 27 VGIDLGTTYSCVGVFQQG-RVEILANDQGNRTTPSYVAF 64
>pdb|1S3X|A Chain A, The Crystal Structure Of The Human Hsp70 Atpase Domain
Length = 382
Score = 28.5 bits (62), Expect = 1.1, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 8/54 (14%)
Query: 1 MSVDLGSEWMKVAIVSPGVPMEIALNKESKRKTPTLVAFHKGNSGTDICDKLIG 54
+ +DLG+ + + + G +EI N + R TP+ VAF TD ++LIG
Sbjct: 7 IGIDLGTTYSCIGVFQHG-KVEIIANDQGNRTTPSYVAF------TDT-ERLIG 52
>pdb|2BUP|A Chain A, T13g Mutant Of The Atpase Fragment Of Bovine Hsc70
Length = 381
Score = 28.1 bits (61), Expect = 1.4, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 8/54 (14%)
Query: 1 MSVDLGSEWMKVAIVSPGVPMEIALNKESKRKTPTLVAFHKGNSGTDICDKLIG 54
+ +DLG + V + G +EI N + R TP+ VAF TD ++LIG
Sbjct: 7 VGIDLGGTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAF------TDT-ERLIG 52
>pdb|3IUC|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein
5 (BipGRP78) ATPASE DOMAIN IN COMPLEX WITH ADP
pdb|3IUC|C Chain C, Crystal Structure Of The Human 70kda Heat Shock Protein
5 (BipGRP78) ATPASE DOMAIN IN COMPLEX WITH ADP
Length = 408
Score = 27.3 bits (59), Expect = 2.4, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 1 MSVDLGSEWMKVAIVSPGVPMEIALNKESKRKTPTLVAF 39
+ +DLG+ + V + G +EI N + R TP+ VAF
Sbjct: 29 VGIDLGTTYSCVGVFKNG-RVEIIANDQGNRITPSYVAF 66
>pdb|3LDL|A Chain A, Crystal Structure Of Human Grp78 (70kda Heat Shock
Protein 5 BIP) Atpase Domain In Complex With Atp
pdb|3LDL|B Chain B, Crystal Structure Of Human Grp78 (70kda Heat Shock
Protein 5 BIP) Atpase Domain In Complex With Atp
pdb|3LDN|A Chain A, Crystal Structure Of Human Grp78 (70kda Heat Shock
Protein 5 BIP) Atpase Domain In Apo Form
pdb|3LDN|B Chain B, Crystal Structure Of Human Grp78 (70kda Heat Shock
Protein 5 BIP) Atpase Domain In Apo Form
pdb|3LDO|A Chain A, Crystal Structure Of Human Grp78 (70kda Heat Shock
Protein 5 / Bip) Atpase Domain In Complex With Amppnp
pdb|3LDO|B Chain B, Crystal Structure Of Human Grp78 (70kda Heat Shock
Protein 5 / Bip) Atpase Domain In Complex With Amppnp
pdb|3LDP|A Chain A, Crystal Structure Of Human Grp78 (70kda Heat Shock
Protein 5 BIP) Atpase Domain In Complex With Small
Molecule Inhibitor
pdb|3LDP|B Chain B, Crystal Structure Of Human Grp78 (70kda Heat Shock
Protein 5 BIP) Atpase Domain In Complex With Small
Molecule Inhibitor
Length = 384
Score = 26.9 bits (58), Expect = 2.5, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 1 MSVDLGSEWMKVAIVSPGVPMEIALNKESKRKTPTLVAF 39
+ +DLG+ + V + G +EI N + R TP+ VAF
Sbjct: 8 VGIDLGTTYSCVGVFKNG-RVEIIANDQGNRITPSYVAF 45
>pdb|1NGH|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 26.9 bits (58), Expect = 3.3, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 8/54 (14%)
Query: 1 MSVDLGSEWMKVAIVSPGVPMEIALNKESKRKTPTLVAFHKGNSGTDICDKLIG 54
+ ++LG+ + V + G +EI N + R TP+ VAF TD ++LIG
Sbjct: 7 VGINLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAF------TDT-ERLIG 52
>pdb|1NGG|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 26.2 bits (56), Expect = 5.1, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 8/54 (14%)
Query: 1 MSVDLGSEWMKVAIVSPGVPMEIALNKESKRKTPTLVAFHKGNSGTDICDKLIG 54
+ + LG+ + V + G +EI N + R TP+ VAF TD ++LIG
Sbjct: 7 VGISLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAF------TDT-ERLIG 52
>pdb|1V4G|A Chain A, Crystal Structure Of Gamma-glutamylcysteine Synthetase
From Escherichia Coli B
pdb|1V4G|B Chain B, Crystal Structure Of Gamma-glutamylcysteine Synthetase
From Escherichia Coli B
pdb|1V4G|C Chain C, Crystal Structure Of Gamma-glutamylcysteine Synthetase
From Escherichia Coli B
pdb|1V4G|D Chain D, Crystal Structure Of Gamma-glutamylcysteine Synthetase
From Escherichia Coli B
Length = 518
Score = 25.4 bits (54), Expect = 8.6, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 19/32 (59%)
Query: 25 LNKESKRKTPTLVAFHKGNSGTDICDKLIGCW 56
L ++ KR TL + + G + +CD+L+ C+
Sbjct: 409 LFRDLKRVAQTLDSINGGEAYQKVCDELVACF 440
>pdb|1VA6|A Chain A, Crystal Structure Of Gamma-Glutamylcysteine Synthetase
From Escherichia Coli B Complexed With Transition-State
Analogue
pdb|1VA6|B Chain B, Crystal Structure Of Gamma-Glutamylcysteine Synthetase
From Escherichia Coli B Complexed With Transition-State
Analogue
pdb|2D32|A Chain A, Crystal Structure Of Michaelis Complex Of Gamma-
Glutamylcysteine Synthetase
pdb|2D32|B Chain B, Crystal Structure Of Michaelis Complex Of Gamma-
Glutamylcysteine Synthetase
pdb|2D32|C Chain C, Crystal Structure Of Michaelis Complex Of Gamma-
Glutamylcysteine Synthetase
pdb|2D32|D Chain D, Crystal Structure Of Michaelis Complex Of Gamma-
Glutamylcysteine Synthetase
pdb|2D33|A Chain A, Crystal Structure Of Gamma-Glutamylcysteine Synthetase
Complexed With Aluminum Fluoride
pdb|2D33|B Chain B, Crystal Structure Of Gamma-Glutamylcysteine Synthetase
Complexed With Aluminum Fluoride
pdb|2D33|C Chain C, Crystal Structure Of Gamma-Glutamylcysteine Synthetase
Complexed With Aluminum Fluoride
pdb|2D33|D Chain D, Crystal Structure Of Gamma-Glutamylcysteine Synthetase
Complexed With Aluminum Fluoride
Length = 518
Score = 25.4 bits (54), Expect = 8.6, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 19/32 (59%)
Query: 25 LNKESKRKTPTLVAFHKGNSGTDICDKLIGCW 56
L ++ KR TL + + G + +CD+L+ C+
Sbjct: 409 LFRDLKRVAQTLDSINGGEAYQKVCDELVACF 440
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.133 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,021,146
Number of Sequences: 62578
Number of extensions: 64393
Number of successful extensions: 201
Number of sequences better than 100.0: 49
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 47
Number of HSP's that attempted gapping in prelim test: 199
Number of HSP's gapped (non-prelim): 49
length of query: 64
length of database: 14,973,337
effective HSP length: 35
effective length of query: 29
effective length of database: 12,783,107
effective search space: 370710103
effective search space used: 370710103
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 45 (21.9 bits)