Query psy4515
Match_columns 149
No_of_seqs 154 out of 772
Neff 6.3
Searched_HMMs 29240
Date Fri Aug 16 19:08:57 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4515.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/4515hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1bkr_A Spectrin beta chain; fi 99.9 2.2E-23 7.6E-28 149.6 3.9 84 60-143 2-101 (109)
2 1wyq_A Spectrin beta chain, br 99.9 9E-23 3.1E-27 150.1 5.3 86 58-143 4-105 (127)
3 1bhd_A Utrophin; calponin homo 99.8 4.8E-22 1.6E-26 144.5 5.2 90 59-148 6-114 (118)
4 1wyl_A NEDD9 interacting prote 99.8 2.2E-22 7.5E-27 145.9 1.6 89 59-148 5-112 (116)
5 2d87_A Smoothelin splice isofo 99.8 6.8E-22 2.3E-26 145.7 3.7 87 58-144 4-107 (128)
6 2d89_A EHBP1 protein; all alph 99.8 1.3E-21 4.3E-26 142.4 2.9 90 58-147 6-114 (119)
7 3f7p_A Plectin-1; plakin, hemi 99.8 5E-21 1.7E-25 158.3 6.1 137 7-148 134-295 (296)
8 2d88_A Protein mical-3; all al 99.8 1.2E-21 4.2E-26 142.9 1.0 89 60-148 8-116 (121)
9 3hoc_A Filamin-A; calponin hom 99.8 1.5E-20 5E-25 153.8 4.2 134 7-145 111-268 (272)
10 1wku_A Alpha-actinin 3; calpon 99.8 1.1E-20 3.7E-25 152.7 2.4 135 7-146 89-245 (254)
11 1sh5_A Plectin 1, PLTN, PCN; a 99.8 1.1E-19 3.8E-24 145.6 6.9 137 7-148 78-239 (245)
12 4b7l_A Filamin-B; structural p 99.8 3.7E-20 1.3E-24 155.7 4.2 134 7-145 81-238 (347)
13 1dxx_A Dystrophin; structural 99.8 2.5E-19 8.7E-24 143.8 3.3 139 7-148 78-242 (246)
14 2wa7_A Filamin-B; disease muta 99.7 5.6E-19 1.9E-23 141.8 4.0 134 7-145 84-241 (245)
15 1sjj_A Actinin; 3-helix bundle 99.7 3.8E-18 1.3E-22 155.1 5.4 137 7-148 70-228 (863)
16 1rt8_A Fimbrin; filamentous ac 99.6 1.5E-16 5.3E-21 139.2 0.6 133 7-144 353-510 (513)
17 1pxy_A Fimbrin-like protein; c 99.6 1.3E-16 4.3E-21 139.4 -0.2 133 7-144 340-499 (506)
18 1rt8_A Fimbrin; filamentous ac 99.5 3.2E-14 1.1E-18 124.5 5.5 139 7-148 90-265 (513)
19 1aoa_A T-fimbrin; actin-bindin 99.5 3.5E-15 1.2E-19 121.2 -0.8 131 7-143 98-272 (275)
20 1pxy_A Fimbrin-like protein; c 99.4 2.1E-13 7.2E-18 119.0 4.5 139 7-148 82-256 (506)
21 1wku_A Alpha-actinin 3; calpon 99.2 1.2E-11 4.2E-16 99.6 5.6 88 61-149 27-186 (254)
22 4b7l_A Filamin-B; structural p 99.1 2E-11 7E-16 102.4 4.5 89 60-149 16-183 (347)
23 3f7p_A Plectin-1; plakin, hemi 99.1 2.8E-11 9.6E-16 99.9 4.9 87 62-149 74-235 (296)
24 1sh5_A Plectin 1, PLTN, PCN; a 99.1 9.8E-11 3.3E-15 93.4 6.5 90 60-149 11-179 (245)
25 3hoc_A Filamin-A; calponin hom 99.1 6.3E-11 2.2E-15 96.7 4.4 89 60-149 46-213 (272)
26 1wjo_A T-plastin; CH domain, a 99.0 6.9E-11 2.4E-15 86.5 2.5 49 62-110 8-58 (124)
27 1dxx_A Dystrophin; structural 99.0 1.5E-10 5.3E-15 92.5 4.2 91 59-149 14-181 (246)
28 1bkr_A Spectrin beta chain; fi 99.0 1.2E-10 4E-15 83.1 2.3 38 112-149 12-49 (109)
29 1bhd_A Utrophin; calponin homo 99.0 1.5E-10 5.1E-15 83.7 1.9 38 112-149 17-54 (118)
30 1sjj_A Actinin; 3-helix bundle 98.9 5.2E-10 1.8E-14 101.7 5.1 89 60-149 7-167 (863)
31 2wa7_A Filamin-B; disease muta 98.9 5.7E-10 1.9E-14 89.2 4.5 89 60-149 19-186 (245)
32 1wyq_A Spectrin beta chain, br 98.9 2.9E-10 9.9E-15 83.2 2.6 38 112-149 16-53 (127)
33 1wyl_A NEDD9 interacting prote 98.9 2.5E-10 8.6E-15 82.2 2.0 38 112-149 16-53 (116)
34 2d88_A Protein mical-3; all al 98.9 4.2E-10 1.4E-14 81.7 2.3 38 112-149 18-55 (121)
35 2d87_A Smoothelin splice isofo 98.9 6.5E-10 2.2E-14 81.4 3.2 38 112-149 16-53 (128)
36 2d89_A EHBP1 protein; all alph 98.9 7.4E-10 2.5E-14 80.1 2.4 38 112-149 18-55 (119)
37 1aoa_A T-fimbrin; actin-bindin 98.5 7.7E-08 2.6E-12 77.8 4.1 47 62-108 25-79 (275)
38 1wjo_A T-plastin; CH domain, a 97.1 0.00019 6.4E-09 52.2 2.3 32 118-149 23-55 (124)
39 2vzc_A Alpha-parvin; membrane, 96.1 0.0042 1.4E-07 45.0 3.4 48 61-109 22-69 (131)
40 2qjz_A Microtubule-associated 94.5 0.037 1.3E-06 39.9 4.0 76 62-143 6-103 (123)
41 2yrn_A Neuron navigator 2 isof 94.0 0.015 5.2E-07 41.6 1.1 47 61-108 18-66 (129)
42 2ee7_A Sperm flagellar protein 93.7 0.023 7.8E-07 41.2 1.5 46 63-111 17-62 (127)
43 1wyo_A Protein EB3, microtubul 93.6 0.064 2.2E-06 40.3 3.9 77 62-144 23-121 (159)
44 2r8u_A Microtubule-associated 87.8 0.51 1.8E-05 38.1 4.1 77 61-143 15-113 (268)
45 1wyp_A Calponin 1; CH domain, 85.7 0.56 1.9E-05 33.8 3.1 42 63-107 19-60 (136)
46 1h67_A Calponin alpha; cytoske 85.7 0.26 9E-06 34.1 1.2 42 64-108 6-47 (108)
47 1ujo_A Transgelin; CH domain, 82.4 0.69 2.4E-05 33.6 2.3 46 63-108 11-62 (144)
48 1wyn_A Calponin-2; CH domain, 81.1 0.69 2.4E-05 33.7 1.9 42 63-107 19-60 (146)
49 3i6x_A P195, RAS GTPase-activa 77.6 0.92 3.1E-05 34.7 1.7 45 63-109 49-94 (193)
50 1p5s_A RAS GTPase-activating-l 77.5 1.1 3.6E-05 34.6 2.1 43 63-107 57-100 (203)
51 1p2x_A RNG2 protein, RAS GTPas 77.4 1.2 4.2E-05 32.8 2.3 43 63-107 13-56 (159)
52 1wym_A Transgelin-2; CH domain 77.3 0.71 2.4E-05 34.0 1.0 44 63-108 19-70 (155)
53 2l3g_A RHO guanine nucleotide 76.8 0.82 2.8E-05 32.6 1.2 47 62-108 13-64 (126)
54 4abo_I MAL3, microtubule integ 76.4 2 6.7E-05 31.7 3.1 75 62-143 7-103 (145)
55 2qjx_A Protein BIM1; calponin 74.9 2.6 8.9E-05 30.3 3.4 76 61-143 10-107 (127)
56 2rr8_A Iqgap1 protein; F-actin 72.3 1.3 4.3E-05 33.7 1.2 44 63-108 27-71 (190)
57 1wyr_A RHO guanine nucleotide 70.1 2.1 7E-05 30.2 1.9 47 62-108 7-58 (121)
58 2vzc_A Alpha-parvin; membrane, 51.9 2.4 8.1E-05 30.2 -0.6 36 7-44 87-124 (131)
59 2ee7_A Sperm flagellar protein 51.3 3.8 0.00013 29.4 0.4 27 123-149 32-58 (127)
60 3ky9_A Proto-oncogene VAV; cal 39.2 5.2 0.00018 34.8 -0.5 47 64-110 8-61 (587)
61 1wyp_A Calponin 1; CH domain, 30.7 21 0.00073 25.3 1.7 26 124-149 35-60 (136)
62 1wix_A HOOK homolog 1, RSGI RU 29.8 22 0.00075 26.1 1.6 45 60-108 8-52 (164)
63 2rqw_B 24-meric peptide from s 20.7 30 0.001 18.0 0.6 8 14-21 11-18 (26)
64 1wyn_A Calponin-2; CH domain, 20.7 23 0.00077 25.5 0.2 25 125-149 36-60 (146)
No 1
>1bkr_A Spectrin beta chain; filamentous actin-binding domain, cytoskeleton; 1.10A {Homo sapiens} SCOP: a.40.1.1 PDB: 1aa2_A
Probab=99.87 E-value=2.2e-23 Score=149.65 Aligned_cols=84 Identities=37% Similarity=0.731 Sum_probs=68.0
Q ss_pred cchHHHHHHHHHHhhCCCCCeeecCCCcccccchhhhhhhhccCCCccCccc------------hhcccc---CCCc-cc
Q psy4515 60 RRGTKALEMWCRRVTEGYPGVRVDNMTSSWRDGLAFCALIHHFRPDLIFYYA------------TFFVTE---GYPG-VR 123 (149)
Q Consensus 60 ~~~k~~LL~W~q~~~~~y~~v~v~nf~~sw~dG~a~~Alih~~rP~lid~~~------------~~~vte---g~p~-V~ 123 (149)
.+++++||+|||.++++|++++|+||++||+||+|||||||+++|++|||+. ++++++ |+|. ++
T Consensus 2 ~s~k~~LL~W~q~~~~~y~~v~v~nFs~sw~dG~af~aLih~~~P~lid~~~l~~~~~~~n~~~af~~Ae~~lgi~~ll~ 81 (109)
T 1bkr_A 2 KSAKDALLLWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNLAEQHLGLTKLLD 81 (109)
T ss_dssp CHHHHHHHHHHHHHTTTCTTCCCSSSSGGGTTSHHHHHHHHHHCGGGCCGGGCCTTCHHHHHHHHHHHHHHHHCCCCCCC
T ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCcccccccHHHHHHHHHHCcCCCCHHHcCcCCHHHHHHHHHHHHHHHcCCCccCC
Confidence 4689999999999999999999999999999999999999999999999987 455554 6654 46
Q ss_pred cCCCCCcchhhhHHHHHHhh
Q psy4515 124 VDNMTSSWRDGLAFCALIHH 143 (149)
Q Consensus 124 v~nfs~sw~dgla~~ali~~ 143 (149)
++|+....+|..++++|+.+
T Consensus 82 ~eDv~~~~pD~ksi~tYvs~ 101 (109)
T 1bkr_A 82 PEDISVDHPDEKSIITYVVT 101 (109)
T ss_dssp HHHHSSSSCCHHHHHHHHHH
T ss_pred HHHccCCCCcHHHHHHHHHH
Confidence 66665555555555555544
No 2
>1wyq_A Spectrin beta chain, brain 2; NPPSFA, structural genomics, riken structural genomics/proteomics initiative, RSGI, structural protein; NMR {Homo sapiens}
Probab=99.87 E-value=9e-23 Score=150.15 Aligned_cols=86 Identities=36% Similarity=0.715 Sum_probs=71.4
Q ss_pred cccchHHHHHHHHHHhhCCCCCeeecCCCcccccchhhhhhhhccCCCccCccc------------hhcccc---CCCc-
Q psy4515 58 GERRGTKALEMWCRRVTEGYPGVRVDNMTSSWRDGLAFCALIHHFRPDLIFYYA------------TFFVTE---GYPG- 121 (149)
Q Consensus 58 ~~~~~k~~LL~W~q~~~~~y~~v~v~nf~~sw~dG~a~~Alih~~rP~lid~~~------------~~~vte---g~p~- 121 (149)
++.+++++||+|||.++++|++++|+||++||+||+|||||||+++|++|||+. ++++++ |+|.
T Consensus 4 ~~~s~k~~LL~W~q~~~~~y~~v~V~nFs~sw~DG~Af~aLih~~~P~lid~~~l~~~~~~~n~~~af~~Ae~~Lgi~~l 83 (127)
T 1wyq_A 4 GSSGAKDALLLWCQMKTAGYPNVNVHNFTTSWRDGLAFNAIVHKHRPDLLDFESLKKCNAHYNLQNAFNLAEKELGLTKL 83 (127)
T ss_dssp SCCCSTHHHHHHHHHHHHTSSSCCCSCSSTTSSSSHHHHHHHHHHCTTTCCTTTSCSSCCHHHHHHHHHHHHHTTCCCCC
T ss_pred CcCCHHHHHHHHHHHHHhcCCCCCCCCCcccccccHHHHHHHHHHCcCcCCHHHhCcCCHHHHHHHHHHHHHHHcCCCcc
Confidence 456789999999999999999999999999999999999999999999999987 455554 5544
Q ss_pred cccCCCCCcchhhhHHHHHHhh
Q psy4515 122 VRVDNMTSSWRDGLAFCALIHH 143 (149)
Q Consensus 122 V~v~nfs~sw~dgla~~ali~~ 143 (149)
++++|+....+|..++++|+.+
T Consensus 84 l~~eDv~~~~pDeksimtYvs~ 105 (127)
T 1wyq_A 84 LDPEDVNVDQPDEKSIITYVAT 105 (127)
T ss_dssp SCTTTSCSSSCCHHHHHHHHHH
T ss_pred cCHHHhccCCCcHHHHHHHHHH
Confidence 5788887666666666666654
No 3
>1bhd_A Utrophin; calponin homology, actin binding, structural protein; 2.00A {Homo sapiens} SCOP: a.40.1.1
Probab=99.85 E-value=4.8e-22 Score=144.53 Aligned_cols=90 Identities=28% Similarity=0.518 Sum_probs=68.6
Q ss_pred ccchHHHHHHHHHHhhCCCCCeeecCCCcccccchhhhhhhhccCCCccCccc------------hhcccc---CCCc-c
Q psy4515 59 ERRGTKALEMWCRRVTEGYPGVRVDNMTSSWRDGLAFCALIHHFRPDLIFYYA------------TFFVTE---GYPG-V 122 (149)
Q Consensus 59 ~~~~k~~LL~W~q~~~~~y~~v~v~nf~~sw~dG~a~~Alih~~rP~lid~~~------------~~~vte---g~p~-V 122 (149)
+.+++++||+|||.++++|++++|+||++||+||+|||||||+++|++|||+. ++.+++ |+|. +
T Consensus 6 ~~~~~~~LL~W~q~~~~~y~~v~v~nFs~sw~DG~af~aLih~~~P~lid~~~l~~~~~~~n~~~af~~Ae~~lgi~~ll 85 (118)
T 1bhd_A 6 QTNSEKILLSWVRQTTRPYSQVNVLNFTTSWTDGLAFNAVLHRHKPDLFSWDKVVKMSPIERLEHAFSKAQTYLGIEKLL 85 (118)
T ss_dssp CSHHHHHHHHHHHHHHTTSTTCCCCSSSGGGTTSHHHHHHHHHHCGGGSCHHHHHHSCHHHHHHHHHHHHHHHHCCCCCS
T ss_pred cCCHHHHHHHHHHHHhccCCCCCCCCCcccccCcHHHHHHHHHHCcCcCCHHHhCcCCHHHHHHHHHHHHHHHcCCCccc
Confidence 45688999999999999999999999999999999999999999999999986 455554 5654 4
Q ss_pred ccCCCCC---cchhhhHHHHHHhhhCCCC
Q psy4515 123 RVDNMTS---SWRDGLAFCALIHHFRPDL 148 (149)
Q Consensus 123 ~v~nfs~---sw~dgla~~ali~~~rP~L 148 (149)
+++|+.. +++.-++|++.+.+..|++
T Consensus 86 ~~eDv~~~~pD~ksvmtYvs~l~~~~~~~ 114 (118)
T 1bhd_A 86 DPEDVAVRLPDKKSIIMYLTSLFEVLPQQ 114 (118)
T ss_dssp CHHHHHTSCCCHHHHHHHHHHHHHHC---
T ss_pred CHHHhhcCCCcHHHHHHHHHHHHHHCcCC
Confidence 5666544 4455555555555555654
No 4
>1wyl_A NEDD9 interacting protein with calponin homology and LIM domains; CH domain, mical, structural genomics; NMR {Homo sapiens} PDB: 2dk9_A
Probab=99.84 E-value=2.2e-22 Score=145.89 Aligned_cols=89 Identities=34% Similarity=0.615 Sum_probs=68.0
Q ss_pred ccchHHHHHHHHHHhhCCCCCeeecCCCcccccchhhhhhhhccCCCccCccc------------hhcccc---CCCc-c
Q psy4515 59 ERRGTKALEMWCRRVTEGYPGVRVDNMTSSWRDGLAFCALIHHFRPDLIFYYA------------TFFVTE---GYPG-V 122 (149)
Q Consensus 59 ~~~~k~~LL~W~q~~~~~y~~v~v~nf~~sw~dG~a~~Alih~~rP~lid~~~------------~~~vte---g~p~-V 122 (149)
..+++++||+|||.++++|++++|+||++||+||+|||||||+++|++|||+. ++.+++ |+|. +
T Consensus 5 ~~~~~~~LL~W~q~~~~~y~~v~v~nFs~sw~dG~af~aLih~~~P~lid~~~l~~~~~~~n~~~af~~Ae~~lgi~~lL 84 (116)
T 1wyl_A 5 SSGTQEELLRWCQEQTAGYPGVHVSDLSSSWADGLALCALVYRLQPGLLEPSELQGLGALEATAWALKVAENELGITPVV 84 (116)
T ss_dssp CSSSHHHHHHHHHHHHHHSTTCCCSCTTTTTTSSHHHHHHHHHHCTTSCCCSSGGGCCHHHHHHHHHHHHHHTTCCCCCS
T ss_pred CCCHHHHHHHHHHHHhccCCCCCCCCccccccccHHHHHHHHHHCcCCCCHHHhccCCHHHHHHHHHHHHHHHcCCcccc
Confidence 45678999999999999999999999999999999999999999999999986 345554 4444 4
Q ss_pred ccCCCCCcchhhhHHHHHH---hhhCCCC
Q psy4515 123 RVDNMTSSWRDGLAFCALI---HHFRPDL 148 (149)
Q Consensus 123 ~v~nfs~sw~dgla~~ali---~~~rP~L 148 (149)
.++|+... +|..++++|+ .+..|++
T Consensus 85 ~peD~~~~-~d~ksv~tYvs~l~~~~~~~ 112 (116)
T 1wyl_A 85 SAQAVVAG-SDPLGLIAYLSHFHSAFKSG 112 (116)
T ss_dssp CHHHHHHT-SCHHHHHHHHHHHHHHSCCS
T ss_pred CHHHHhcC-CchhHHHHHHHHHHHHccCC
Confidence 56665443 4555555555 4444543
No 5
>2d87_A Smoothelin splice isoform L2; all alpha, calponin homology domain, actin binding, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2jv9_A 2k3s_A
Probab=99.84 E-value=6.8e-22 Score=145.69 Aligned_cols=87 Identities=36% Similarity=0.652 Sum_probs=69.0
Q ss_pred cccchHHHHHHHHHHhhCCCCCeeecCCCcccccchhhhhhhhccCCCccCccc------------hhcccc---CCCc-
Q psy4515 58 GERRGTKALEMWCRRVTEGYPGVRVDNMTSSWRDGLAFCALIHHFRPDLIFYYA------------TFFVTE---GYPG- 121 (149)
Q Consensus 58 ~~~~~k~~LL~W~q~~~~~y~~v~v~nf~~sw~dG~a~~Alih~~rP~lid~~~------------~~~vte---g~p~- 121 (149)
++.+++++||+|||.++++|++++|+||++||+||+|||||||+++|++|||+. ++++++ ++|.
T Consensus 4 ~~~~~k~~LL~W~q~~~~~y~~v~V~nFs~sw~DG~af~aLih~~~P~lid~~~l~~~~~~~n~~~af~~Ae~~lgip~l 83 (128)
T 2d87_A 4 GSSGIKQMLLDWCRAKTRGYEHVDIQNFSSSWSDGMAFCALVHNFFPEAFDYGQLSPQNRRQNFEVAFSSAETHADCPQL 83 (128)
T ss_dssp CSCCHHHHHHHHHHHHSSSCTTCCCSCTTTTTTSSHHHHHHHHHHCTTTSCSTTSCSSCHHHHHHHHHHHHHHHHCCCCC
T ss_pred CcCCHHHHHHHHHHHHhccCCCCCCCCccccccccHHHHHHHHHHCcCcCCHHHcCccCHHHHHHHHHHHHHHcCCCCcc
Confidence 456789999999999999999999999999999999999999999999999986 345554 4544
Q ss_pred cccCCCC-CcchhhhHHHHHHhhh
Q psy4515 122 VRVDNMT-SSWRDGLAFCALIHHF 144 (149)
Q Consensus 122 V~v~nfs-~sw~dgla~~ali~~~ 144 (149)
+.++|+. ...+|...+++|+.++
T Consensus 84 L~peD~v~~~~pD~ksvmtYvs~l 107 (128)
T 2d87_A 84 LDTEDMVRLREPDWKCVYTYIQEF 107 (128)
T ss_dssp SCHHHHHHSSSCCHHHHHHHHHHH
T ss_pred cCHHHHhccCCccHHHHHHHHHHH
Confidence 5777763 3455566655555543
No 6
>2d89_A EHBP1 protein; all alpha, calponin homology domain, actin binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.83 E-value=1.3e-21 Score=142.43 Aligned_cols=90 Identities=33% Similarity=0.695 Sum_probs=69.3
Q ss_pred cccchHHHHHHHHHHhhCCCCCeeecCCCcccccchhhhhhhhccCCCccCccc------------hhcccc--CCCc-c
Q psy4515 58 GERRGTKALEMWCRRVTEGYPGVRVDNMTSSWRDGLAFCALIHHFRPDLIFYYA------------TFFVTE--GYPG-V 122 (149)
Q Consensus 58 ~~~~~k~~LL~W~q~~~~~y~~v~v~nf~~sw~dG~a~~Alih~~rP~lid~~~------------~~~vte--g~p~-V 122 (149)
++.+++++||+|||.++++|++++|+||++||+||+|||||||+++|++|||+. ++.+++ |+|. +
T Consensus 6 ~~~~~~~~LL~W~~~~~~~y~~v~v~nFs~sw~dG~af~aLi~~~~P~lid~~~l~~~~~~~n~~~af~~a~~LGi~~ll 85 (119)
T 2d89_A 6 SGPNASQSLLVWCKEVTKNYRGVKITNFTTSWRNGLSFCAILHHFRPDLIDYKSLNPQDIKENNKKAYDGFASIGISRLL 85 (119)
T ss_dssp SCCCCHHHHHHHHHHHTTTCSSCCCCCSSHHHHTTHHHHHHHHHHCTTTSCGGGCCTTCSHHHHHHHHHHHHHHTCCCCS
T ss_pred CCCCHHHHHHHHHHHHhccCCCCCCCCccccccccHHHHHHHHHHCcCcCChhhhcccCHHHHHHHHHHHHHHhCCCccc
Confidence 456789999999999999999999999999999999999999999999999987 233333 4444 4
Q ss_pred ccCCCC----CcchhhhHHHHHHhhhCCC
Q psy4515 123 RVDNMT----SSWRDGLAFCALIHHFRPD 147 (149)
Q Consensus 123 ~v~nfs----~sw~dgla~~ali~~~rP~ 147 (149)
.++|+. ++++.-++|++.+.++.|+
T Consensus 86 ~peDi~~~~~pD~ksvmtYvs~l~~~f~~ 114 (119)
T 2d89_A 86 EPSDMVLLAIPDKLTVMTYLYQIRAHFSS 114 (119)
T ss_dssp CHHHHHHSSSCCHHHHHHHHHHHHHHHSC
T ss_pred CHHHHhccCCCcHHHHHHHHHHHHHHccC
Confidence 666664 3555555555555544443
No 7
>3f7p_A Plectin-1; plakin, hemidesmosome, cell adhesion, epidermolysis bullosa, actin-binding, alternative splicing, coiled coil, cytoplasm; 2.75A {Homo sapiens}
Probab=99.82 E-value=5e-21 Score=158.29 Aligned_cols=137 Identities=26% Similarity=0.384 Sum_probs=102.4
Q ss_pred chhhhhhhccCCCcccccccccccccccccee--eehh----hccCCCccccccccccccchHHHHHHHHHHhhCCCCCe
Q psy4515 7 TKALEMWCRRAPDPCFDTLNFDMGERRGTKAL--EMWC----QCNSDPCFDTLDFDMGERRGTKALEMWCRRVTEGYPGV 80 (149)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~w~----~~~~~~~~~~~~~~~~~~~~k~~LL~W~q~~~~~y~~v 80 (149)
+.|||++...+.+.+-+..+ ++.+++.+++ ++|+ +.++.+..+++. .+.+++++||.|||.++.+|+++
T Consensus 134 n~aL~~lk~~gv~lv~I~~~--DIvdGn~kliLgLlW~Li~~~~i~~i~~~g~~---~~~s~k~~LL~W~n~~~~~y~~v 208 (296)
T 3f7p_A 134 QIALDYLRHRQVKLVNIRND--DIADGNPKLTLGLIWTIILHFQISDIQVSGQS---EDMTAKEKLLLWSQRMVEGYQGL 208 (296)
T ss_dssp HHHHHHHHHTTCCCTTCCHH--HHHTTCHHHHHHHHHHHHHHHTTTTCCCSSCC---TTSCHHHHHHHHHHHHTTTSTTC
T ss_pred HHHHHHHHHhCccccCCChh--hhhccchHHHHHHHHHhhcccceeeeeccCCc---ccCCHHHHHHHHHHHHhcCCCCC
Confidence 67999999999998877654 5888888666 8887 344544443321 23567899999999999999999
Q ss_pred eecCCCcccccchhhhhhhhccCCCccCccc------------hhcccc---CCCc-cccCCCCC---cchhhhHHHHHH
Q psy4515 81 RVDNMTSSWRDGLAFCALIHHFRPDLIFYYA------------TFFVTE---GYPG-VRVDNMTS---SWRDGLAFCALI 141 (149)
Q Consensus 81 ~v~nf~~sw~dG~a~~Alih~~rP~lid~~~------------~~~vte---g~p~-V~v~nfs~---sw~dgla~~ali 141 (149)
+|+||++||+||+|||||||+++|+++||+. ++.+++ |+|. +.++|+.. +++.-++|++.+
T Consensus 209 ~I~nFs~sw~DG~af~aLI~~~~P~lid~~~l~~~~~~~N~~~Af~~Ae~~LGi~~ll~pEDi~~~~pDeksimtyvs~l 288 (296)
T 3f7p_A 209 RCDNFTSSWRDGRLFNAIIHRHKPLLIDMNKVYRQTNLENLDQAFSVAERDLGVTRLLDPEDVDVPQPDEKSIITYVSSL 288 (296)
T ss_dssp CCCCSSGGGTTSHHHHHHHHHHCGGGCCHHHHTTSCHHHHHHHHHHHHHHHHCCCCCCCHHHHSSSSCCHHHHHHHHHHH
T ss_pred cCCCccccccccHHHHHHHHHHCcCccCHHHcCcccHHHHHHHHHHHHHHhCCCCccCCHHHhcCCCCcHHHHHHHHHHH
Confidence 9999999999999999999999999999985 455553 5544 45555544 455555566666
Q ss_pred hhhCCCC
Q psy4515 142 HHFRPDL 148 (149)
Q Consensus 142 ~~~rP~L 148 (149)
.+..|.|
T Consensus 289 y~~fp~l 295 (296)
T 3f7p_A 289 YDAMPRV 295 (296)
T ss_dssp HHTCC--
T ss_pred HHHCcCC
Confidence 6666754
No 8
>2d88_A Protein mical-3; all alpha, calponin homology domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2e9k_A
Probab=99.82 E-value=1.2e-21 Score=142.94 Aligned_cols=89 Identities=34% Similarity=0.642 Sum_probs=69.0
Q ss_pred cchHHHHHHHHHHhhCCCCCeeecCCCcccccchhhhhhhhccCCCccCccc------------hhcccc---CCCc-cc
Q psy4515 60 RRGTKALEMWCRRVTEGYPGVRVDNMTSSWRDGLAFCALIHHFRPDLIFYYA------------TFFVTE---GYPG-VR 123 (149)
Q Consensus 60 ~~~k~~LL~W~q~~~~~y~~v~v~nf~~sw~dG~a~~Alih~~rP~lid~~~------------~~~vte---g~p~-V~ 123 (149)
.+.+++||+|||.++++|++++|+||++||+||+|||||||+++|++|||+. ++.+++ |+|. +.
T Consensus 8 ~~~~~~LL~W~q~~~~~y~~v~v~nFs~sw~DG~af~aLih~~~P~lid~~~l~~~~~~~n~~~af~~Ae~~lgi~~lL~ 87 (121)
T 2d88_A 8 VARSSKLLGWCQRQTDGYAGVNVTDLTMSWKSGLALCAIIHRYRPDLIDFDSLDEQNVEKNNQLAFDIAEKELGISPIMT 87 (121)
T ss_dssp CSSSCHHHHHHHHHSTTSSSCCCCCSSHHHHTSHHHHHHHHHHCTTTSCTTTSCTTCHHHHHHHHHHHHHHHTCCCCSSC
T ss_pred cCHHHHHHHHHHHHhccCCCCCCCCchhhccccHHHHHHHHHhCcCcCCHHHcCccCHHHHHHHHHHHHHHHcCCCCcCC
Confidence 4567889999999999999999999999999999999999999999999986 345554 4544 46
Q ss_pred cCCCC----CcchhhhHHHHHHhhhCCCC
Q psy4515 124 VDNMT----SSWRDGLAFCALIHHFRPDL 148 (149)
Q Consensus 124 v~nfs----~sw~dgla~~ali~~~rP~L 148 (149)
++|+. ++++.-++|++.+.+..|++
T Consensus 88 peD~~~~~~pD~ksimtYvs~l~~~~~~~ 116 (121)
T 2d88_A 88 GKEMASVGEPDKLSMVMYLTQFYEMFKDS 116 (121)
T ss_dssp HHHHHHSSCCCHHHHHHHHHHHHHHHSSC
T ss_pred HHHHhccCCCcHHHHHHHHHHHHHHcccC
Confidence 66664 35555555555555555543
No 9
>3hoc_A Filamin-A; calponin homology domain, actin binding domain, acetylation, actin-binding, alternative splicing, cytoplasm, cytoskeleton; 2.30A {Homo sapiens} PDB: 3hop_A 3hor_A
Probab=99.80 E-value=1.5e-20 Score=153.81 Aligned_cols=134 Identities=18% Similarity=0.283 Sum_probs=102.1
Q ss_pred chhhhhhhccCCCcccccccccccccccccee--eehh----hccCCCccccccc-cccccchHHHHHHHHHHhhCCCCC
Q psy4515 7 TKALEMWCRRAPDPCFDTLNFDMGERRGTKAL--EMWC----QCNSDPCFDTLDF-DMGERRGTKALEMWCRRVTEGYPG 79 (149)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~w~----~~~~~~~~~~~~~-~~~~~~~k~~LL~W~q~~~~~y~~ 79 (149)
+.||+++...+.+.+.+..+ ++.+++.+++ ++|+ +.++.+..+.++. ...+.+++++||+|||.+ |++
T Consensus 111 ~~aL~~lk~~gv~lvnI~~~--DIvdGn~kliLgLlW~Li~~~~i~~l~~~~e~~~~~~~~s~k~~LL~W~n~~---~~~ 185 (272)
T 3hoc_A 111 SVALEFLDRESIKLVSIDSK--AIVDGNLKLILGLIWTLILHYSISMPMWDEEEDEEAKKQTPKQRLLGWIQNK---LPQ 185 (272)
T ss_dssp HHHHHHHHHTTCCCSSCCHH--HHHTTCHHHHHHHHHHHHHHHHTTCC------------CCHHHHHHHHHHHH---CTT
T ss_pred HHHHHHHHHcCCcccccccc--hhhcCCHHHHHHHHHHHHHHHhhhhhhccccccccccccCHHHHHHHHHHhh---CCC
Confidence 57999999999999887765 4888888666 7887 4556665554432 223456899999999997 578
Q ss_pred eeecCCCcccccchhhhhhhhccCCCcc-Cccc------------hhcccc---CCC-ccccCCCCCcchhhhHHHHHHh
Q psy4515 80 VRVDNMTSSWRDGLAFCALIHHFRPDLI-FYYA------------TFFVTE---GYP-GVRVDNMTSSWRDGLAFCALIH 142 (149)
Q Consensus 80 v~v~nf~~sw~dG~a~~Alih~~rP~li-d~~~------------~~~vte---g~p-~V~v~nfs~sw~dgla~~ali~ 142 (149)
++|+||++||+||+|||||||+++|+++ ||+. ++.+++ |+| -+.++|+....+|..++++|+.
T Consensus 186 ~~I~nFs~sw~DG~af~aLi~~~~P~li~d~~~l~~~~~~~n~~~Af~~Ae~~lGi~~ll~peDiv~~~pD~ksimtYvs 265 (272)
T 3hoc_A 186 LPITNFSRDWQSGRALGALVDSCAPGLCPDWDSWDASKPVTNAREAMQQADDWLGIPQVITPEEIVDPNVDKHSVMTYLS 265 (272)
T ss_dssp SCCCCSSGGGTTSHHHHHHHHHHSTTSSTTGGGSCTTCHHHHHHHHHHHHHHHHCCCCSSCHHHHTCTTCCHHHHHHHHT
T ss_pred CCCCChhhcccchHHHHHHHHHhCcccccchhhcCccCHHHHHHHHHHHHHHhCCCCccCCHHHhccCCCChHHHHHHHH
Confidence 9999999999999999999999999999 8875 345554 444 4578888777899999999999
Q ss_pred hhC
Q psy4515 143 HFR 145 (149)
Q Consensus 143 ~~r 145 (149)
+|+
T Consensus 266 ~~~ 268 (272)
T 3hoc_A 266 QFP 268 (272)
T ss_dssp TCC
T ss_pred Hhh
Confidence 886
No 10
>1wku_A Alpha-actinin 3; calponin homology domain, actin binding domain, contractIle protein; 1.60A {Homo sapiens} PDB: 1tjt_A 2r0o_A 2eyi_A 2eyn_A 3lue_K
Probab=99.79 E-value=1.1e-20 Score=152.69 Aligned_cols=135 Identities=28% Similarity=0.464 Sum_probs=98.2
Q ss_pred chhhhhhhccCCCcccccccccccccccccee--eehhhccCCCccccccccccccchHHHHHHHHHHhhCCCCCeeecC
Q psy4515 7 TKALEMWCRRAPDPCFDTLNFDMGERRGTKAL--EMWCQCNSDPCFDTLDFDMGERRGTKALEMWCRRVTEGYPGVRVDN 84 (149)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~w~~~~~~~~~~~~~~~~~~~~~k~~LL~W~q~~~~~y~~v~v~n 84 (149)
+.||+++...+.+.+-+. -.++.+++.+++ ++|.++... ...++...+.+++++||.|||.++++|++++|+|
T Consensus 89 ~~aL~~~k~~gv~lv~I~--~~DIvdG~~kliLgLlW~li~~~---~i~~i~~~~~~~~~~LL~W~~~~~~~y~~v~v~n 163 (254)
T 1wku_A 89 NKALDFIASKGVKLVSIG--AEEIVDGNLKMTLGMIWTIILRF---AIQDISVEETSAKEGLLLWCQRKTAPYRNVNVQN 163 (254)
T ss_dssp HHHHHHHHTTTCCCCSCC--HHHHHHCCHHHHHHHHHHHHHHH---HTTTCEETTEEHHHHHHHHHHHHHTTCTTCCCCS
T ss_pred HHHHHHHHHcCCCccCCC--HHHHhccchHHHHHHHHHHHHHH---hhcccccccccHHHHHHHHHHHHccCCCCCcCCC
Confidence 578999999999988664 455888887666 778743221 1122222356788999999999999999999999
Q ss_pred CCcccccchhhhhhhhccCCCccCccc------------hhcccc---CCCc-cccCCCC----CcchhhhHHHHHHhhh
Q psy4515 85 MTSSWRDGLAFCALIHHFRPDLIFYYA------------TFFVTE---GYPG-VRVDNMT----SSWRDGLAFCALIHHF 144 (149)
Q Consensus 85 f~~sw~dG~a~~Alih~~rP~lid~~~------------~~~vte---g~p~-V~v~nfs----~sw~dgla~~ali~~~ 144 (149)
|++||+||+|||||||+++|+++||+. ++.+++ |.|. +.++|+. ++++.-++|++.+.+.
T Consensus 164 Fs~s~~DG~a~~aLi~~~~P~~id~~~l~~~~~~~n~~~a~~~A~~~lGi~~~l~peDiv~~~~pD~k~imtyva~l~~~ 243 (254)
T 1wku_A 164 FHTSWKDGLALCALIHRHRPDLIDYAKLRKDDPIGNLNTAFEVAEKYLDIPKMLDAEDIVNTPKPDEKAIMTYVSCFYHA 243 (254)
T ss_dssp SSGGGTTSHHHHHHHHHHCTTSCCGGGCCTTCHHHHHHHHHHHHHHHSCCCCCSCHHHHHHSSSCCHHHHHHHHHHHHHH
T ss_pred CccchhhHHHHHHHHHHHCCCcccccccCcCCHHHHHHHHHHHHHHHcCCCCcCCHHHHhccCCCcHHHHHHHHHHHHHH
Confidence 999999999999999999999999976 344543 4544 4666662 3455556666655544
Q ss_pred CC
Q psy4515 145 RP 146 (149)
Q Consensus 145 rP 146 (149)
.|
T Consensus 244 ~~ 245 (254)
T 1wku_A 244 FA 245 (254)
T ss_dssp HH
T ss_pred hh
Confidence 43
No 11
>1sh5_A Plectin 1, PLTN, PCN; actin-binding domain, calponin-homology domain, structural protein; 2.00A {Mus musculus} SCOP: a.40.1.1 a.40.1.1 PDB: 1sh6_A 1mb8_A
Probab=99.79 E-value=1.1e-19 Score=145.59 Aligned_cols=137 Identities=26% Similarity=0.388 Sum_probs=101.7
Q ss_pred chhhhhhhccCCCcccccccccccccccccee--eehh----hccCCCccccccccccccchHHHHHHHHHHhhCCCCCe
Q psy4515 7 TKALEMWCRRAPDPCFDTLNFDMGERRGTKAL--EMWC----QCNSDPCFDTLDFDMGERRGTKALEMWCRRVTEGYPGV 80 (149)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~w~----~~~~~~~~~~~~~~~~~~~~k~~LL~W~q~~~~~y~~v 80 (149)
+.||+++.+.+.+.+-+..+ ++.+++.+++ ++|. +.++.+..+++. .+.+++++||.|||.++.+|+++
T Consensus 78 ~~aL~~~k~~g~~l~~I~~~--DIvdg~~k~iLgLlw~li~~~~i~~i~~~g~~---~~~~~~~~LL~W~~~~~~~~~~~ 152 (245)
T 1sh5_A 78 QIALDYLRHRQVKLVNIRND--DIADGNPKLTLGLIWTIILHFQISDIQVSGQS---EDMTAKEKLLLWSQRMVEGYQGL 152 (245)
T ss_dssp HHHHHHHHHTTCCCCSCCHH--HHHTTCHHHHHHHHHHHHHHHTTTTCCCTTCC---SSCCHHHHHHHHHHHHTTTSTTC
T ss_pred HHHHHHHHHcCCcccCCChH--hhhcccHHHHHHHHHHHHHhhccccccccccc---ccCCHHHHHHHHHHHHhccCCCc
Confidence 57999999999998887554 4888888666 7887 344444443321 23467899999999999999999
Q ss_pred eecCCCcccccchhhhhhhhccCCCccCccc------------hhcccc---CCCc-cccCCCC---CcchhhhHHHHHH
Q psy4515 81 RVDNMTSSWRDGLAFCALIHHFRPDLIFYYA------------TFFVTE---GYPG-VRVDNMT---SSWRDGLAFCALI 141 (149)
Q Consensus 81 ~v~nf~~sw~dG~a~~Alih~~rP~lid~~~------------~~~vte---g~p~-V~v~nfs---~sw~dgla~~ali 141 (149)
+|+||++||+||+|||||||+++|+++||+. ++.+++ |.|. +.++|+. ++++.-++|++.+
T Consensus 153 ~v~nF~~s~~DG~a~~aLi~~~~P~~i~~~~l~~~~~~~n~~~a~~~a~~~lGi~~~l~peDi~~~~pd~k~i~tyva~l 232 (245)
T 1sh5_A 153 RCDNFTTSWRDGRLFNAIIHRHKPMLIDMNKVYRQTNLENLDQAFSVAERDLGVTRLLDPEDVDVPQPDEKSIITYVSSL 232 (245)
T ss_dssp CCCCSSGGGTTSHHHHHHHHTTCTTTCCHHHHHHSCHHHHHHHHHHHHHHHHCCCCCCCHHHHSSSSCCHHHHHHHHHHH
T ss_pred ccCCccccccchHHHHHHHHHHCCCCCCHHHcccCCHHHHHHHHHHHHHHhCCCCccCCHHHhccCCCcHHHHHHHHHHH
Confidence 9999999999999999999999999999875 334443 4443 4555554 4566666677767
Q ss_pred hhhCCCC
Q psy4515 142 HHFRPDL 148 (149)
Q Consensus 142 ~~~rP~L 148 (149)
.+..|.+
T Consensus 233 ~~~~~~~ 239 (245)
T 1sh5_A 233 YDAMPRV 239 (245)
T ss_dssp HHHCC--
T ss_pred HHHcCCC
Confidence 6666654
No 12
>4b7l_A Filamin-B; structural protein, FR 1 filamin hinge ABD-1; 2.05A {Homo sapiens} PDB: 2wfn_A
Probab=99.79 E-value=3.7e-20 Score=155.69 Aligned_cols=134 Identities=19% Similarity=0.273 Sum_probs=101.6
Q ss_pred chhhhhhhccCCCcccccccccccccccccee--eehh----hccCCCccccccc-cccccchHHHHHHHHHHhhCCCCC
Q psy4515 7 TKALEMWCRRAPDPCFDTLNFDMGERRGTKAL--EMWC----QCNSDPCFDTLDF-DMGERRGTKALEMWCRRVTEGYPG 79 (149)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~w~----~~~~~~~~~~~~~-~~~~~~~k~~LL~W~q~~~~~y~~ 79 (149)
+.||+++.+.+.+.+-+..+= +.++|.+++ ++|+ +.++.+..+.+.. ...+.+++++||+|||.++ ++
T Consensus 81 ~~al~~~~~~g~~lv~i~~~D--IvdGn~~liLgLiW~li~~~~i~~~~~~~~~~~~~~~~~~k~~LL~W~~~~~---~~ 155 (347)
T 4b7l_A 81 SVALEFLDRESIKLVSIDSKA--IVDGNLKLILGLVWTLILHYSISMPVWEDEGDDDAKKQTPKQRLLGWIQNKI---PY 155 (347)
T ss_dssp HHHHHHHHHTTCCCSSCCHHH--HHTTCHHHHHHHHHHHHHHHHTTSSCCC-------CCCCHHHHHHHHHHHHC---TT
T ss_pred HHHHHHHHHhccccCCCCcch--hhcCCHhhHHHHHHHHHHHHhhhhhhcccccchhhhhhhHHHHHHHHHHhhC---CC
Confidence 579999999999998877654 999998666 7887 4444444433322 3345678999999999986 67
Q ss_pred eeecCCCcccccchhhhhhhhccCCCcc-Cccc------------hhcccc---CCCc-cccCCCCCcchhhhHHHHHHh
Q psy4515 80 VRVDNMTSSWRDGLAFCALIHHFRPDLI-FYYA------------TFFVTE---GYPG-VRVDNMTSSWRDGLAFCALIH 142 (149)
Q Consensus 80 v~v~nf~~sw~dG~a~~Alih~~rP~li-d~~~------------~~~vte---g~p~-V~v~nfs~sw~dgla~~ali~ 142 (149)
++|+||++||+||+|||||||+++|+++ ||+. ++.+++ |+|. +.++|+....+|..++++|+.
T Consensus 156 ~~v~nF~~sw~DG~af~aLi~~~~P~~~~d~~~l~~~~~~~n~~~Af~~Ae~~lGip~ll~peDi~~~~pDeksimtYvs 235 (347)
T 4b7l_A 156 LPITNFNQNWQDGKALGALVDSCAPGLCPDWESWDPQKPVDNAREAMQQADDWLGVPQVITPEEIIHPDVDEHSVMTYLS 235 (347)
T ss_dssp SCCCCSSGGGTTSHHHHHHHHHHSTTSSTTGGGSCTTCHHHHHHHHHHHHHHHHCCCCSSCHHHHTCTTCCHHHHHHHHT
T ss_pred cccCCCCCCccchHHHHHHHHHhCCccccchhhcCcCCHHHHHHHHHHHHHHhcCCCcccCHHHcCCCCCChhHHHHHHH
Confidence 8899999999999999999999999999 7875 455554 5554 467777766778888888887
Q ss_pred hhC
Q psy4515 143 HFR 145 (149)
Q Consensus 143 ~~r 145 (149)
+|+
T Consensus 236 ~~~ 238 (347)
T 4b7l_A 236 QFP 238 (347)
T ss_dssp TGG
T ss_pred HHh
Confidence 654
No 13
>1dxx_A Dystrophin; structural protein, muscular dystrophy, calponin homology domain, actin-binding, utrophin; 2.6A {Homo sapiens} SCOP: a.40.1.1 a.40.1.1 PDB: 1qag_A
Probab=99.75 E-value=2.5e-19 Score=143.78 Aligned_cols=139 Identities=25% Similarity=0.367 Sum_probs=99.5
Q ss_pred chhhhhhhccCCCcccccccccccccccccee--eehhhccC----CCccccccccccccchHHHHHHHHHHhhCCCCCe
Q psy4515 7 TKALEMWCRRAPDPCFDTLNFDMGERRGTKAL--EMWCQCNS----DPCFDTLDFDMGERRGTKALEMWCRRVTEGYPGV 80 (149)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~w~~~~~----~~~~~~~~~~~~~~~~k~~LL~W~q~~~~~y~~v 80 (149)
+.||+++...+.+.+-+..+- +.+++.+++ ++|.++.. .+..+... ...+..+++.||.|||.++++|+++
T Consensus 78 ~~aL~~~k~~g~~l~~I~~~D--Ivdg~~~liL~Llw~li~~~~i~~~~~e~~~-~~~~~~~~~~LL~W~~~~~~~~~~~ 154 (246)
T 1dxx_A 78 NKALRVLQNNNVDLVNIGSTD--IVDGNHKLTLGLIWNIILHWQVKNVMKNIMA-GLQQTNSEKILLSWVRQSTRNYPQV 154 (246)
T ss_dssp HHHHHHHHHTTCCCTTCCHHH--HHTTCHHHHHHHHHHHHHHHTTTHHHHHHHH-HHTTCCHHHHHHHHHHHHHTTCTTC
T ss_pred HHHHHHHHHcCCccccCCHHH--hhcccHHHHHHHHHHHHHHHHHhhhhhhhhh-hcccccHHHHHHHHHHHHhccCCCC
Confidence 579999999999988776554 888888665 77874332 11111100 1123457889999999999999999
Q ss_pred eecCCCcccccchhhhhhhhccCCCccCccc-------------hhcccc---CCCc-cccCCCC---CcchhhhHHHHH
Q psy4515 81 RVDNMTSSWRDGLAFCALIHHFRPDLIFYYA-------------TFFVTE---GYPG-VRVDNMT---SSWRDGLAFCAL 140 (149)
Q Consensus 81 ~v~nf~~sw~dG~a~~Alih~~rP~lid~~~-------------~~~vte---g~p~-V~v~nfs---~sw~dgla~~al 140 (149)
+|+||++||+||+|||||||+++|+++||+. ++.+++ |.|. +.++|+. ++++.-++|++.
T Consensus 155 ~i~nFs~s~~DG~a~~aLi~~~~P~li~~~~~~~~~~~~~n~~~a~~~A~~~lGi~~~l~peDi~~~~pD~k~i~tyva~ 234 (246)
T 1dxx_A 155 NVINFTTSWSDGLALNALIHSHRPDLFDWNSVVSQQSATQRLEHAFNIARYQLGIEKLLDPEDVDTTYPDKKSILMYITS 234 (246)
T ss_dssp CCCSSSGGGTTSHHHHHHHHHHCGGGSCHHHHHTCCCHHHHHHHHHHHHHHTTCCCCCCCHHHHSSSSCCHHHHHHHHHH
T ss_pred CcCCCcccchhHHHHHHHHHHHCcCccchhhhcccCCHHHHHHHHHHHHHHhCCCCccCCHHHhhcCCCcHHHHHHHHHH
Confidence 9999999999999999999999999999876 233333 4443 4555544 455666666666
Q ss_pred HhhhCCCC
Q psy4515 141 IHHFRPDL 148 (149)
Q Consensus 141 i~~~rP~L 148 (149)
+.+.+|+.
T Consensus 235 l~~~~~~~ 242 (246)
T 1dxx_A 235 LFQVLPQQ 242 (246)
T ss_dssp HHTTSCCC
T ss_pred HHHHccCC
Confidence 66676764
No 14
>2wa7_A Filamin-B; disease mutation, skeletal dysplasia, structural protein, actin-crosslinking, myogenesis, cytoskeleton; 1.85A {Homo sapiens} PDB: 2wa5_A 2wa6_A 3fer_A
Probab=99.74 E-value=5.6e-19 Score=141.79 Aligned_cols=134 Identities=19% Similarity=0.271 Sum_probs=100.5
Q ss_pred chhhhhhhccCCCcccccccccccccccccee--eehh----hccCCCccccccc-cccccchHHHHHHHHHHhhCCCCC
Q psy4515 7 TKALEMWCRRAPDPCFDTLNFDMGERRGTKAL--EMWC----QCNSDPCFDTLDF-DMGERRGTKALEMWCRRVTEGYPG 79 (149)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~w~----~~~~~~~~~~~~~-~~~~~~~k~~LL~W~q~~~~~y~~ 79 (149)
+.||+++...+.+.+-+. -.++.+++.+++ ++|. +.++.+..+..+. ...+.++++.||+|||.++ ++
T Consensus 84 ~~aL~~~k~~g~~lv~I~--~~DIvdG~~kliLgLlW~li~~~~i~~~~~~~~~~~~~~~~~~~~~LL~W~~~~~---~~ 158 (245)
T 2wa7_A 84 SVALEFLDRESIKLVSID--SKAIVDGNLKLILGLVWTLILHYSISMPVWEDEGDDDAKKQTPKQRLLGWIQNKI---PY 158 (245)
T ss_dssp HHHHHHHHHTTCCCCSCC--HHHHHTTCHHHHHHHHHHHHHHHHTTSSCCSSCC----CCCCHHHHHHHHHHHHS---TT
T ss_pred HHHHHHHHHcCCcccCCC--HHHhhCCCHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHhC---CC
Confidence 578999999999888774 455888888666 7887 3455555443321 2234567899999999986 57
Q ss_pred eeecCCCcccccchhhhhhhhccCCCcc-Cccc------------hhcccc---CCCc-cccCCCCCcchhhhHHHHHHh
Q psy4515 80 VRVDNMTSSWRDGLAFCALIHHFRPDLI-FYYA------------TFFVTE---GYPG-VRVDNMTSSWRDGLAFCALIH 142 (149)
Q Consensus 80 v~v~nf~~sw~dG~a~~Alih~~rP~li-d~~~------------~~~vte---g~p~-V~v~nfs~sw~dgla~~ali~ 142 (149)
++|+||++||+||+|||||||+++|+++ ||+. ++.+++ |.|. +.++|+....+|..++++|+.
T Consensus 159 ~~v~nFs~s~~dG~a~~aLi~~~~P~~i~~~~~l~~~~~~~n~~~a~~~A~~~lGi~~~l~peDi~~~~~d~ksi~tyvs 238 (245)
T 2wa7_A 159 LPITNFNQNWQDGKALGALVDSCAPGLCPDWESWDPQKPVDNAREAVQQADDWLGVPQVITPEEIIHPDVDEHSVMTYLS 238 (245)
T ss_dssp SCCCCSSGGGTTSHHHHHHHHHHSTTSSTTGGGSCTTCHHHHHHHHHHHHHHHSCCCCSSCHHHHTCTTCCHHHHHHHHT
T ss_pred CCCCCCcccchhhHHHHHHHHHHCccccccccccCcccHHHHHHHHHHHHHHhCCCCccCCHHHhccCCCcHHHHHHHHH
Confidence 8999999999999999999999999999 8865 344444 4443 577777776788888888887
Q ss_pred hhC
Q psy4515 143 HFR 145 (149)
Q Consensus 143 ~~r 145 (149)
+|+
T Consensus 239 ~~~ 241 (245)
T 2wa7_A 239 QFP 241 (245)
T ss_dssp HHH
T ss_pred HHh
Confidence 653
No 15
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1
Probab=99.71 E-value=3.8e-18 Score=155.14 Aligned_cols=137 Identities=26% Similarity=0.410 Sum_probs=101.2
Q ss_pred chhhhhhhccCCCcccccccccccccccccee--eehhhccCCCccccccccccccchHHHHHHHHHHhhCCCCCeeecC
Q psy4515 7 TKALEMWCRRAPDPCFDTLNFDMGERRGTKAL--EMWCQCNSDPCFDTLDFDMGERRGTKALEMWCRRVTEGYPGVRVDN 84 (149)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~w~~~~~~~~~~~~~~~~~~~~~k~~LL~W~q~~~~~y~~v~v~n 84 (149)
+.||+++...+.+.+-+...- +.+++.+++ ++|+++..... .++...+.+++++||.|||.++++|++++|+|
T Consensus 70 ~~~l~~~~~~g~~~~~i~~~d--i~~g~~~~~l~l~w~l~~~~~~---~~~~~~~~~~~~~ll~W~~~~~~~~~~~~v~n 144 (863)
T 1sjj_A 70 NKALDFIASKGVKLVSIGAEE--IVDGNVKMTLGMIWTIILRFAI---QDISVEETSAKEGLLLWYQRKTAPYKNVNIQN 144 (863)
T ss_dssp HHHHHHHHHTTCCCTTCCSHH--HHTTCHHHHHHHHHHHHSCCCC---CCCCCCCCCSTTTTHHHHHHHHTTSTTCCCCS
T ss_pred HHHHHHHHHcCCccCCCChHH--hhcCCHHHHHHHHHHHHHHHhh---cccchhccchHHHHHHHHHHhccCCCCCCCCC
Confidence 579999999999888776654 888888666 78875544322 22323345678899999999999999999999
Q ss_pred CCcccccchhhhhhhhccCCCccCccc------------hhcccc---CCCc-cccCCCC----CcchhhhHHHHHHhhh
Q psy4515 85 MTSSWRDGLAFCALIHHFRPDLIFYYA------------TFFVTE---GYPG-VRVDNMT----SSWRDGLAFCALIHHF 144 (149)
Q Consensus 85 f~~sw~dG~a~~Alih~~rP~lid~~~------------~~~vte---g~p~-V~v~nfs----~sw~dgla~~ali~~~ 144 (149)
|++||+||+|||||||+++|++|||+. ++.+++ |+|. +.++|+. ++.+.-++|++.+.+.
T Consensus 145 f~~s~~dg~~~~~li~~~~p~~~~~~~~~~~~~~~n~~~a~~~a~~~lg~~~~l~~ed~~~~~~pd~~~~~~y~~~l~~~ 224 (863)
T 1sjj_A 145 FHISWKDGLGFCALIHRHRPELIDYGKLRKDDPLTNLNTAFDVAEKYLDIPKMLDAEDIVGTARPDEKAIMTYVSSFYHA 224 (863)
T ss_dssp SSGGGTTSHHHHHHHHTTCCSSSCSGGGGSCCCGGGCTHHHHHHHHHHCCCCSCCHHHHTTCSSCCHHHHHHHHHHTTTT
T ss_pred CccccccHHHHHHHHHHhCCCCcChhhCCCCCHHHHHHHHHHHHHHhCCCCCccCHHHHhCCCCCcHHHHHHHHHHHHHH
Confidence 999999999999999999999999986 344443 4544 4555643 3455555555555555
Q ss_pred CCCC
Q psy4515 145 RPDL 148 (149)
Q Consensus 145 rP~L 148 (149)
.|++
T Consensus 225 ~~~~ 228 (863)
T 1sjj_A 225 FSGA 228 (863)
T ss_dssp TCCC
T ss_pred hccc
Confidence 5543
No 16
>1rt8_A Fimbrin; filamentous actin binding domain (ABD), calponin homology, actin-crosslinking, structural protein; 2.00A {Schizosaccharomyces pombe} SCOP: a.40.1.1
Probab=99.58 E-value=1.5e-16 Score=139.17 Aligned_cols=133 Identities=9% Similarity=0.099 Sum_probs=89.8
Q ss_pred chhhhhhhccCCCcccccccccccccccccee--eehhhccCCCccc-ccccc-ccccchHHHHHHHHHHhhC-CCCCee
Q psy4515 7 TKALEMWCRRAPDPCFDTLNFDMGERRGTKAL--EMWCQCNSDPCFD-TLDFD-MGERRGTKALEMWCRRVTE-GYPGVR 81 (149)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~w~~~~~~~~~~-~~~~~-~~~~~~k~~LL~W~q~~~~-~y~~v~ 81 (149)
+.||+++...+.+.+-+.. .++.+++.+++ ++|+++- ...+. ..++. .++.-..+.||.|||++++ +|+++.
T Consensus 353 ~~al~~~~~~gv~lv~i~~--~DIvdg~~~~~LgLlW~li~-~~~~~~l~~l~~~~~~~~~~~LL~W~~~~~~~~~~~~~ 429 (513)
T 1rt8_A 353 NYAVDLGKNQGFSLVGIQG--ADITDGSRTLTLALVWQMMR-MNITKTLHSLSRGGKTLSDSDMVAWANSMAAKGGKGSQ 429 (513)
T ss_dssp HHHHHHHHHTTCCCTTCCH--HHHHTTCHHHHHHHHHHHHH-HHHHHHTTC------CCCHHHHHHHHHHHHTTTCSSCC
T ss_pred HHHHHHHHHcCceeeccch--hhhhcCCchhhHHHHHHHHH-HHHHHHHHhhccCCCcCCHHHHHHHHHHHhhccCCCCC
Confidence 5689999999988886544 44888887665 7887542 11111 12221 1122233469999999997 589999
Q ss_pred ecCCC-cccccchhhhhhhhccCCCccCccc----------------hhcccc--CCCc-cccCCCCCcchhhhHHHHHH
Q psy4515 82 VDNMT-SSWRDGLAFCALIHHFRPDLIFYYA----------------TFFVTE--GYPG-VRVDNMTSSWRDGLAFCALI 141 (149)
Q Consensus 82 v~nf~-~sw~dG~a~~Alih~~rP~lid~~~----------------~~~vte--g~p~-V~v~nfs~sw~dgla~~ali 141 (149)
|+||+ +||+||+|||||||+++|+++||+. ++.+++ |+|. +.++|+...- ..++++|+
T Consensus 430 i~nF~~~s~~dG~a~~aLi~~~~P~~i~~~~l~~~~~~~~~~~n~~~af~~A~~lGi~~~l~peDi~~~~--pksi~tyv 507 (513)
T 1rt8_A 430 IRSFRDPSISTGVFVLDVLHGIKSEYVDYNLVTDGSTEELAIQNARLAISIARKLGAVIFILPEDIVAVR--PRLVLHFI 507 (513)
T ss_dssp CSSTTCGGGGGSHHHHHHHHHHCGGGCCGGGCCCCCSHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHTTC--HHHHHHHH
T ss_pred CCCCCcccccchHHHHHHHHHhCCCcCCHHhhccccChhhHHHHHHHHHHHHHHcCCCccCCHHHhcCCC--cccHHHHH
Confidence 99999 8999999999999999999999876 233343 4443 3555544332 36677777
Q ss_pred hhh
Q psy4515 142 HHF 144 (149)
Q Consensus 142 ~~~ 144 (149)
..+
T Consensus 508 a~l 510 (513)
T 1rt8_A 508 GSL 510 (513)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 17
>1pxy_A Fimbrin-like protein; calponin homology, F-actin-binding domain (ABD), F-actin- crosslinking, structural genomics; 2.40A {Arabidopsis thaliana} SCOP: a.40.1.1 PDB: 3byh_B
Probab=99.58 E-value=1.3e-16 Score=139.44 Aligned_cols=133 Identities=12% Similarity=0.163 Sum_probs=91.7
Q ss_pred chhhhhhhccCCCcccccccccccccccccee--eehhhccCCCccccc-cc---cccccchHHHHHHHHHHhhCC-CCC
Q psy4515 7 TKALEMWCRRAPDPCFDTLNFDMGERRGTKAL--EMWCQCNSDPCFDTL-DF---DMGERRGTKALEMWCRRVTEG-YPG 79 (149)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~w~~~~~~~~~~~~-~~---~~~~~~~k~~LL~W~q~~~~~-y~~ 79 (149)
+.||+++...+.+.+.+..+- +.+++.+++ ++|+++ .....+.. +. ..++...+++||.|||+++++ +.+
T Consensus 340 ~~aL~~~k~~~v~l~~I~~~d--Ivdg~~kl~L~Liw~li-r~~i~~~~~~l~~~~~~~~~~~~~LL~W~~~~~~~~~~~ 416 (506)
T 1pxy_A 340 NQVIKIGKQLKFSLVNVAGND--IVQGNKKLILGLLWQLM-RFHMLQLLKSLRSRTLGKEMTDADILSWANRKVRTMGRK 416 (506)
T ss_dssp HHHHHHHHHTTCCCCSCCHHH--HHTTCHHHHHHHHHHHH-HHHHHHHHHTTCC-----CCCHHHHHHHHHHHHHTTTCC
T ss_pred HHHHHHHHHcCCcccCCCHHH--HhcCCHHHHHHHHHHHH-HHhhHHHHHHhhcccccccccHHHHHHHHHHHhhhcCCc
Confidence 378999999999988887776 888888666 788764 21111110 00 112333578999999999986 468
Q ss_pred eeecCCC-cccccchhhhhhhhccCCCccCccch----------------hcccc--CCCc-cccCCCCCcchhhhHHHH
Q psy4515 80 VRVDNMT-SSWRDGLAFCALIHHFRPDLIFYYAT----------------FFVTE--GYPG-VRVDNMTSSWRDGLAFCA 139 (149)
Q Consensus 80 v~v~nf~-~sw~dG~a~~Alih~~rP~lid~~~~----------------~~vte--g~p~-V~v~nfs~sw~dgla~~a 139 (149)
+.|+||+ +||+||+|||||||+++|+++||+.+ +.+++ |+|. +.++|+.. .|..++++
T Consensus 417 ~~i~nF~d~s~~dG~a~~aLi~~~~P~li~~~~l~~~~s~~~~~~N~~~a~~~a~~lGi~~~l~peDi~~--~d~ksi~t 494 (506)
T 1pxy_A 417 LQIESFKDKSLSSGLFFLNLLWAVEPRVVNWNLVTKGETDDEKRLNATYIVSVARKLGCSVFLLPEDIVE--VNQKMILI 494 (506)
T ss_dssp CCCSSTTCGGGGGCHHHHHHHHHHCGGGCCTTSCCCSCSHHHHHHHHHHHHHHHHHHTCCCCCCHHHHHT--TCHHHHHH
T ss_pred cccCCCCcccccchHHHHHHHHhhCCCeeehhhcccCCCchhHHHHHHHHHHHHHHcCCCCcCCHHHccC--CChhHHHH
Confidence 9999999 89999999999999999999998742 23333 4443 45555543 25666666
Q ss_pred HHhhh
Q psy4515 140 LIHHF 144 (149)
Q Consensus 140 li~~~ 144 (149)
|+.++
T Consensus 495 yv~~l 499 (506)
T 1pxy_A 495 LTASI 499 (506)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65543
No 18
>1rt8_A Fimbrin; filamentous actin binding domain (ABD), calponin homology, actin-crosslinking, structural protein; 2.00A {Schizosaccharomyces pombe} SCOP: a.40.1.1
Probab=99.46 E-value=3.2e-14 Score=124.48 Aligned_cols=139 Identities=14% Similarity=0.117 Sum_probs=93.0
Q ss_pred chhhhhhhccCC-Ccccccccccccccccccee--eehhh----ccCCCcccc-----------ccc-cccccchHHHHH
Q psy4515 7 TKALEMWCRRAP-DPCFDTLNFDMGERRGTKAL--EMWCQ----CNSDPCFDT-----------LDF-DMGERRGTKALE 67 (149)
Q Consensus 7 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~w~~----~~~~~~~~~-----------~~~-~~~~~~~k~~LL 67 (149)
+.||+++...+. +.+.+..+- +.+++.+.+ ++|.+ .++.+.+.. +.. ...+.++++.||
T Consensus 90 ~~~L~~~k~~g~~~l~~i~~~D--I~dg~~~liLgLiW~li~~~~l~~i~~~~~pel~~l~~~~e~~~~~~~~~~~~~LL 167 (513)
T 1rt8_A 90 NVVINSAKAMGGISITNIGAGD--ILEGREHLILGLVWQIIRRGLLGKIDITLHPELYRLLEEDETLDQFLRLPPEKILL 167 (513)
T ss_dssp HHHHHHHHHHSSCCCSSCCHHH--HHTTCHHHHHHHHHHHHHHHSSCCC----------------CHHHHTTSCHHHHHH
T ss_pred HHHHHHHHHcCCCccCCcCHHh--hhcCCHHHHHHHHHHHHHHhhhcccccccCHHHHhhhccCCchhhhhcCCHHHHHH
Confidence 468899988887 777766554 888887655 68873 334332210 000 112356789999
Q ss_pred HHHHHhhC--CCCCeeecCCCcccccchhhhhhhhccCCCccCccc------------hhcccc--CCCc-cccCCCCC-
Q psy4515 68 MWCRRVTE--GYPGVRVDNMTSSWRDGLAFCALIHHFRPDLIFYYA------------TFFVTE--GYPG-VRVDNMTS- 129 (149)
Q Consensus 68 ~W~q~~~~--~y~~v~v~nf~~sw~dG~a~~Alih~~rP~lid~~~------------~~~vte--g~p~-V~v~nfs~- 129 (149)
+|||.++. +|+ +.|+||++||+||++||||+|+++|+++|++. +++.++ |.|. +.++|+..
T Consensus 168 ~W~n~~l~~~g~~-~~V~nFs~s~~DG~a~~aLl~~~~P~~i~~~~l~~~~~~~n~~~a~~~a~~lgi~~~l~peDi~~~ 246 (513)
T 1rt8_A 168 RWFNYHLKAANWP-RTVSNFSKDVSDGENYTVLLNQLAPELCSRAPLQTTDVLQRAEQVLQNAEKLDCRKYLTPTAMVAG 246 (513)
T ss_dssp HHHHHHHHHTTCS-CCCSCSSGGGTTSHHHHHHHHHHCTTTCCSGGGGCCCHHHHHHHHHHHHHTTTCCCSCCHHHHHTT
T ss_pred HHHHHHHHhcCCC-cCcccchhhhhccHHHHHHHHHHCccccccCCCCccCHHHHHHHHHHHHHHcCCCccCCHHHhcCC
Confidence 99998863 675 89999999999999999999999999999865 334444 3443 34444432
Q ss_pred cchhhhHHHHHHhhhCCCC
Q psy4515 130 SWRDGLAFCALIHHFRPDL 148 (149)
Q Consensus 130 sw~dgla~~ali~~~rP~L 148 (149)
+-+.-++|++.+.+.+|++
T Consensus 247 ~~k~il~yva~l~~~~~~~ 265 (513)
T 1rt8_A 247 NPKLNLAFVAHLFNTHPGL 265 (513)
T ss_dssp CHHHHHHHHHHHHHHCCCC
T ss_pred CHHHHHHHHHHHHhhhccc
Confidence 2345556666666666664
No 19
>1aoa_A T-fimbrin; actin-binding protein, calcium-binding, phosphorylation; 2.40A {Homo sapiens} SCOP: a.40.1.1 a.40.1.1
Probab=99.46 E-value=3.5e-15 Score=121.23 Aligned_cols=131 Identities=14% Similarity=0.148 Sum_probs=87.2
Q ss_pred chhhhhhhccCCCcccccccccccccccccee--eehhhcc----CCCccc-----------cccc-cccccchHHHHHH
Q psy4515 7 TKALEMWCRRAPDPCFDTLNFDMGERRGTKAL--EMWCQCN----SDPCFD-----------TLDF-DMGERRGTKALEM 68 (149)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~w~~~~----~~~~~~-----------~~~~-~~~~~~~k~~LL~ 68 (149)
+.||+++...+.+.+-+.. .++.+++.+++ ++|.++- +.+.+. ++.. ...+.+++++||+
T Consensus 98 ~~aL~~~k~~g~~l~~I~~--~DIvdg~~~liLgLlw~li~~~~~~~I~~~~~~~l~~ll~~ge~~~~~~~~s~~~~LL~ 175 (275)
T 1aoa_A 98 NLALNSASAIGCHVVNIGA--EDLRAGKPHLVLGLLWQIIKIGLFADIELSRNEALAALLRDGETLEELMKLSPEELLLR 175 (275)
T ss_dssp HHHHHHHHHTTCCCTTCCH--HHHHTTCHHHHHHHHHHHHHHHHHHHHHSSCTTCC--------CHHHHHTSCHHHHHHH
T ss_pred HHHHHHHHHcCCcccCCCH--HHHHcCcHHHHHHHHHHHHHHhhhcccccccChHHHHhhccCCchhhhhccCHHHHHHH
Confidence 5789999999998887644 44888887655 7787432 212111 1110 0012367899999
Q ss_pred HHHHhhC--CCCCeeecCCCcccccchhhhhhhhccCCC---------ccCccc------------hhcccc--CCCc-c
Q psy4515 69 WCRRVTE--GYPGVRVDNMTSSWRDGLAFCALIHHFRPD---------LIFYYA------------TFFVTE--GYPG-V 122 (149)
Q Consensus 69 W~q~~~~--~y~~v~v~nf~~sw~dG~a~~Alih~~rP~---------lid~~~------------~~~vte--g~p~-V 122 (149)
|||++++ +|+. |+||++||+||+|||||||+++|+ ++|++. ++++++ |.|. +
T Consensus 176 W~n~~l~~~g~~~--I~nF~~s~~DG~a~~aLi~~~~P~~~~~~~~~l~~~~~~~~~~~~~~n~~~a~~~A~~lGi~~~l 253 (275)
T 1aoa_A 176 WANFHLENSGWQK--INNFSADIKDSKAYFHLLNQIAPKGQKEGEPRIDINMSGFNETDDLKRAESMLQQADKLGCRQFV 253 (275)
T ss_dssp HHHHHHHHTTCCC--CSCSSTTTTTSHHHHHHHHHHSCCSCSSSCCCCCCCCTTTTCSSHHHHHHHHHHHHTTTTCCCSC
T ss_pred HHHHHHHhcCCCc--chhhhhhhhhhHHHHHHHHHHCCCccccccccccccccCCCccCHHHHHHHHHHHHHHcCCCCcC
Confidence 9999774 4544 999999999999999999999999 777764 344554 3332 3
Q ss_pred ccCCCCCcchhhhHHHHHHhh
Q psy4515 123 RVDNMTSSWRDGLAFCALIHH 143 (149)
Q Consensus 123 ~v~nfs~sw~dgla~~ali~~ 143 (149)
.++|+.. .+....++|+..
T Consensus 254 ~peDi~~--~~~k~i~tyva~ 272 (275)
T 1aoa_A 254 TPADVVS--GNPKLNLAFVAN 272 (275)
T ss_dssp CHHHHHT--TCHHHHHHHHHH
T ss_pred CHHHcCC--CChhHHHHHHHH
Confidence 5555542 345666666654
No 20
>1pxy_A Fimbrin-like protein; calponin homology, F-actin-binding domain (ABD), F-actin- crosslinking, structural genomics; 2.40A {Arabidopsis thaliana} SCOP: a.40.1.1 PDB: 3byh_B
Probab=99.38 E-value=2.1e-13 Score=119.04 Aligned_cols=139 Identities=18% Similarity=0.129 Sum_probs=91.8
Q ss_pred chhhhhhhccCCCcccccccccccccccccee--eehh----hccCCCccc-----------cccc-cccccchHHHHHH
Q psy4515 7 TKALEMWCRRAPDPCFDTLNFDMGERRGTKAL--EMWC----QCNSDPCFD-----------TLDF-DMGERRGTKALEM 68 (149)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~w~----~~~~~~~~~-----------~~~~-~~~~~~~k~~LL~ 68 (149)
+.||+++...+.+.+.+ .-.++.+++.+++ ++|. +.++.+.+. ++.. ...+.++++.||+
T Consensus 82 ~~~L~~~k~~g~~~~~i--~~~Dl~dg~~~liLgLiw~li~~~~l~~i~~~~~p~l~~l~~~~e~~~~~~~~~~~~~LL~ 159 (506)
T 1pxy_A 82 TLCLNSAKAVGCSVVNI--GTQDLAEGRPHLVLGLISQLIKIQLLADLNLKKTPQLVELLEDSDDVEELLRLPPEKVLLK 159 (506)
T ss_dssp HHHHHHHHHTTCCCTTC--CHHHHHHTCHHHHHHHHHHHHHHHHHSSSSSCC-----------------CCSCHHHHHHH
T ss_pred HHHHHHHHHhCCCcCCC--CHHHHhcCChHHHHHHHHHHHHHHHHHhhhhccCHHHHHhhcCCcchhhhhcCCHHHHHHH
Confidence 46889999999888877 4444666666443 6776 223322211 1110 1123567899999
Q ss_pred HHHHhhC--CCCCeeecCCCcccccchhhhhhhhccCCCccCccc------------hhcccc--CCCc-cccCCCCCc-
Q psy4515 69 WCRRVTE--GYPGVRVDNMTSSWRDGLAFCALIHHFRPDLIFYYA------------TFFVTE--GYPG-VRVDNMTSS- 130 (149)
Q Consensus 69 W~q~~~~--~y~~v~v~nf~~sw~dG~a~~Alih~~rP~lid~~~------------~~~vte--g~p~-V~v~nfs~s- 130 (149)
|||.++. +|+ +.|+||++||+||++||+|+|+++|+++||+. +++.++ |.|. +.++|+...
T Consensus 160 W~n~~l~~~g~~-~~v~nFs~s~~DG~a~~~Ll~~~~P~~i~~~~l~~~~~~~n~~~a~~~a~~lGi~~~l~peDi~~~~ 238 (506)
T 1pxy_A 160 WMNFHLKKGGYK-KTVSNFSADLKDAQAYAFLLNVLAPEHCDPATLDAKDPLERAELVLSHAERMNCKRYLTAEEIVEGS 238 (506)
T ss_dssp HHHHHHHHTTCC-SCCCCSSTTTTTSHHHHHHHHHHCGGGCCGGGGGCCSHHHHHHHHHHHHHHTTCCCCCCHHHHHTTC
T ss_pred HHHHHHHhcCCC-ccCccccccccchHHHHHHHHHhCccccccccCCcCCHHHHHHHHHHHHHHcCCCCcCCHHHHhcCC
Confidence 9998764 664 89999999999999999999999999999875 233343 3333 344443322
Q ss_pred chhhhHHHHHHhhhCCCC
Q psy4515 131 WRDGLAFCALIHHFRPDL 148 (149)
Q Consensus 131 w~dgla~~ali~~~rP~L 148 (149)
-+.-++|++.+.+.+|++
T Consensus 239 ~k~v~tyva~l~~~~~~~ 256 (506)
T 1pxy_A 239 STLNLAFVAQIFHERNGL 256 (506)
T ss_dssp HHHHHHHHHHHHHHCCCC
T ss_pred hhHHHHHHHHHhhhcCCC
Confidence 245567777777777765
No 21
>1wku_A Alpha-actinin 3; calponin homology domain, actin binding domain, contractIle protein; 1.60A {Homo sapiens} PDB: 1tjt_A 2r0o_A 2eyi_A 2eyn_A 3lue_K
Probab=99.20 E-value=1.2e-11 Score=99.55 Aligned_cols=88 Identities=33% Similarity=0.649 Sum_probs=72.2
Q ss_pred chHHHHHHHHHHhhCCCCCeeecCCCcccccchhhhhhhhccCCCccCc--------cc---------------------
Q psy4515 61 RGTKALEMWCRRVTEGYPGVRVDNMTSSWRDGLAFCALIHHFRPDLIFY--------YA--------------------- 111 (149)
Q Consensus 61 ~~k~~LL~W~q~~~~~y~~v~v~nf~~sw~dG~a~~Alih~~rP~lid~--------~~--------------------- 111 (149)
..++++..|++..+.+. +..|+||..+.+||..+|.|+....|+.++- ..
T Consensus 27 ~q~~~f~~WiN~~L~~~-~~~v~~l~~dl~DGv~L~~Lle~l~~~~v~k~~~~~~~~~~~eNi~~aL~~~k~~gv~lv~I 105 (254)
T 1wku_A 27 QQRKTFTAWCNSHLRKA-GTQIENIEEDFRNGLKLMLLLEVISGERLPRPDKGKMRFHKIANVNKALDFIASKGVKLVSI 105 (254)
T ss_dssp HHHHHHHHHHHHHHGGG-TCCCSCTTTTTTTSHHHHHHHHHHHCSCCCCCCSCCSHHHHHHHHHHHHHHHHTTTCCCCSC
T ss_pred HHHHHHHHHHHHHcccc-CCCccCHHHHccCHHHHHHHHHHhCcCCCCCCCCCccHHHHHHhHHHHHHHHHHcCCCccCC
Confidence 45789999999998764 5678999999999999999998765554421 00
Q ss_pred -------------------------------------------hhccccCCCccccCCCCCcchhhhHHHHHHhhhCCCC
Q psy4515 112 -------------------------------------------TFFVTEGYPGVRVDNMTSSWRDGLAFCALIHHFRPDL 148 (149)
Q Consensus 112 -------------------------------------------~~~vteg~p~V~v~nfs~sw~dgla~~ali~~~rP~L 148 (149)
++..+++|+++.|+||++||+||++||+++|+++|++
T Consensus 106 ~~~DIvdG~~kliLgLlW~li~~~~i~~i~~~~~~~~~~LL~W~~~~~~~y~~v~v~nFs~s~~DG~a~~aLi~~~~P~~ 185 (254)
T 1wku_A 106 GAEEIVDGNLKMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYRNVNVQNFHTSWKDGLALCALIHRHRPDL 185 (254)
T ss_dssp CHHHHHHCCHHHHHHHHHHHHHHHHTTTCEETTEEHHHHHHHHHHHHHTTCTTCCCCSSSGGGTTSHHHHHHHHHHCTTS
T ss_pred CHHHHhccchHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHccCCCCCcCCCCccchhhHHHHHHHHHHHCCCc
Confidence 1135568999999999999999999999999999998
Q ss_pred C
Q psy4515 149 M 149 (149)
Q Consensus 149 i 149 (149)
|
T Consensus 186 i 186 (254)
T 1wku_A 186 I 186 (254)
T ss_dssp C
T ss_pred c
Confidence 6
No 22
>4b7l_A Filamin-B; structural protein, FR 1 filamin hinge ABD-1; 2.05A {Homo sapiens} PDB: 2wfn_A
Probab=99.15 E-value=2e-11 Score=102.41 Aligned_cols=89 Identities=21% Similarity=0.472 Sum_probs=70.3
Q ss_pred cchHHHHHHHHHHhhCCCCCeeecCCCcccccchhhhhhhhccCCCccCcc--c--------------------------
Q psy4515 60 RRGTKALEMWCRRVTEGYPGVRVDNMTSSWRDGLAFCALIHHFRPDLIFYY--A-------------------------- 111 (149)
Q Consensus 60 ~~~k~~LL~W~q~~~~~y~~v~v~nf~~sw~dG~a~~Alih~~rP~lid~~--~-------------------------- 111 (149)
.-++++..+|++.+..+. +..|+|+..+++||+.++.|+....++-++.. .
T Consensus 16 ~iQ~ktFt~WiN~~L~~~-~~~V~dL~~Dl~DG~~L~~Lle~ls~~~l~~~~~~~p~~r~~k~eNv~~al~~~~~~g~~l 94 (347)
T 4b7l_A 16 KIQQNTFTRWCNEHLKSV-NKRIGNLQTDLSDGLRLIALLEVLSQKRMYRKYHQRPTFRQMQLENVSVALEFLDRESIKL 94 (347)
T ss_dssp HHHHHHHHHHHHHHHGGG-TCCCSCTTTTTTTSHHHHHHHHHHHTCCCSSCCCSSCCSHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHhhCcC-CCCcCCHHHHhcCHHHHHHHHHHHcCCccChhhcCCcccHHHHHHHHHHHHHHHHHhcccc
Confidence 447889999999998764 56899999999999999999875444333210 0
Q ss_pred ---------------------------------------------------hhccccCCCccccCCCCCcchhhhHHHHH
Q psy4515 112 ---------------------------------------------------TFFVTEGYPGVRVDNMTSSWRDGLAFCAL 140 (149)
Q Consensus 112 ---------------------------------------------------~~~vteg~p~V~v~nfs~sw~dgla~~al 140 (149)
+.|+...++++.|+||++||+||++||++
T Consensus 95 v~i~~~DIvdGn~~liLgLiW~li~~~~i~~~~~~~~~~~~~~~~~~k~~LL~W~~~~~~~~~v~nF~~sw~DG~af~aL 174 (347)
T 4b7l_A 95 VSIDSKAIVDGNLKLILGLVWTLILHYSISMPVWEDEGDDDAKKQTPKQRLLGWIQNKIPYLPITNFNQNWQDGKALGAL 174 (347)
T ss_dssp SSCCHHHHHTTCHHHHHHHHHHHHHHHHTTSSCCC-------CCCCHHHHHHHHHHHHCTTSCCCCSSGGGTTSHHHHHH
T ss_pred CCCCcchhhcCCHhhHHHHHHHHHHHHhhhhhhcccccchhhhhhhHHHHHHHHHHhhCCCcccCCCCCCccchHHHHHH
Confidence 11444457889999999999999999999
Q ss_pred HhhhCCCCC
Q psy4515 141 IHHFRPDLM 149 (149)
Q Consensus 141 i~~~rP~Li 149 (149)
||+++|+++
T Consensus 175 i~~~~P~~~ 183 (347)
T 4b7l_A 175 VDSCAPGLC 183 (347)
T ss_dssp HHHHSTTSS
T ss_pred HHHhCCccc
Confidence 999999975
No 23
>3f7p_A Plectin-1; plakin, hemidesmosome, cell adhesion, epidermolysis bullosa, actin-binding, alternative splicing, coiled coil, cytoplasm; 2.75A {Homo sapiens}
Probab=99.14 E-value=2.8e-11 Score=99.87 Aligned_cols=87 Identities=31% Similarity=0.534 Sum_probs=70.5
Q ss_pred hHHHHHHHHHHhhCCCCCeeecCCCcccccchhhhhhhhccCCCccCccc------------------------------
Q psy4515 62 GTKALEMWCRRVTEGYPGVRVDNMTSSWRDGLAFCALIHHFRPDLIFYYA------------------------------ 111 (149)
Q Consensus 62 ~k~~LL~W~q~~~~~y~~v~v~nf~~sw~dG~a~~Alih~~rP~lid~~~------------------------------ 111 (149)
+++++..|++..+... +..|+|+-.+.+||..+|.|+....|+.++...
T Consensus 74 Qkktft~WINs~L~~~-~~~V~dL~~DL~DGvvL~~Lle~L~~~~l~~~~~~~r~~kleNvn~aL~~lk~~gv~lv~I~~ 152 (296)
T 3f7p_A 74 QKKTFTKWVNKHLIKA-QRHISDLYEDLRDGHNLISLLEVLSGDSLPREKGRMRFHKLQNVQIALDYLRHRQVKLVNIRN 152 (296)
T ss_dssp HHHHHHHHHHHHHGGG-TCCCSCTTTTTTTSHHHHHHHHHHHCCCCCCCCCSSHHHHHHHHHHHHHHHHHTTCCCTTCCH
T ss_pred HHHHHHHHHHHHcccC-CCCcccHHHHHhhHHHHHHHHHHhcCCcccccCCcChhhhhhhHHHHHHHHHHhCccccCCCh
Confidence 5789999999998653 457899999999999999999766555443110
Q ss_pred ---------------------------------------------hhccccCCCccccCCCCCcchhhhHHHHHHhhhCC
Q psy4515 112 ---------------------------------------------TFFVTEGYPGVRVDNMTSSWRDGLAFCALIHHFRP 146 (149)
Q Consensus 112 ---------------------------------------------~~~vteg~p~V~v~nfs~sw~dgla~~ali~~~rP 146 (149)
++..+++|+++.|+||++||+||++||++||+++|
T Consensus 153 ~DIvdGn~kliLgLlW~Li~~~~i~~i~~~g~~~~~s~k~~LL~W~n~~~~~y~~v~I~nFs~sw~DG~af~aLI~~~~P 232 (296)
T 3f7p_A 153 DDIADGNPKLTLGLIWTIILHFQISDIQVSGQSEDMTAKEKLLLWSQRMVEGYQGLRCDNFTSSWRDGRLFNAIIHRHKP 232 (296)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHTTTTCCCSSCCTTSCHHHHHHHHHHHHTTTSTTCCCCCSSGGGTTSHHHHHHHHHHCG
T ss_pred hhhhccchHHHHHHHHHhhcccceeeeeccCCcccCCHHHHHHHHHHHHhcCCCCCcCCCccccccccHHHHHHHHHHCc
Confidence 12345678899999999999999999999999999
Q ss_pred CCC
Q psy4515 147 DLM 149 (149)
Q Consensus 147 ~Li 149 (149)
++|
T Consensus 233 ~li 235 (296)
T 3f7p_A 233 LLI 235 (296)
T ss_dssp GGC
T ss_pred Ccc
Confidence 976
No 24
>1sh5_A Plectin 1, PLTN, PCN; actin-binding domain, calponin-homology domain, structural protein; 2.00A {Mus musculus} SCOP: a.40.1.1 a.40.1.1 PDB: 1sh6_A 1mb8_A
Probab=99.11 E-value=9.8e-11 Score=93.44 Aligned_cols=90 Identities=30% Similarity=0.529 Sum_probs=70.9
Q ss_pred cchHHHHHHHHHHhhCCC----CCeeecCCCcccccchhhhhhhhccCCCccCccc------------------------
Q psy4515 60 RRGTKALEMWCRRVTEGY----PGVRVDNMTSSWRDGLAFCALIHHFRPDLIFYYA------------------------ 111 (149)
Q Consensus 60 ~~~k~~LL~W~q~~~~~y----~~v~v~nf~~sw~dG~a~~Alih~~rP~lid~~~------------------------ 111 (149)
..+++++..|++..+... .+..|+|+-.+.+||..+|.|+....|+.++...
T Consensus 11 ~~q~~~f~~WiN~~L~~~~~~~~~~~v~dl~~dl~DG~~L~~Lle~l~~~~~~~~~~~~~~~~~eNv~~aL~~~k~~g~~ 90 (245)
T 1sh5_A 11 RVQKKTFTKWVNKHLIKHWRAEAQRHISDLYEDLRDGHNLISLLEVLSGDSLPREKGRMRFHKLQNVQIALDYLRHRQVK 90 (245)
T ss_dssp HHHHHHHHHHHHHHHTTCSSGGGCCCCSCTTTTTTTSHHHHHHHHHHHCCCCCCCCCCSHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHhccccccccCCCCccchHhhccCHHHHHHHHHHhcCccccCCCCcchHHHHHhHHHHHHHHHHcCCc
Confidence 346789999999999763 2457899999999999999999765544332110
Q ss_pred ---------------------------------------------------hhccccCCCccccCCCCCcchhhhHHHHH
Q psy4515 112 ---------------------------------------------------TFFVTEGYPGVRVDNMTSSWRDGLAFCAL 140 (149)
Q Consensus 112 ---------------------------------------------------~~~vteg~p~V~v~nfs~sw~dgla~~al 140 (149)
+...+++|+++.|+||++||+||++||++
T Consensus 91 l~~I~~~DIvdg~~k~iLgLlw~li~~~~i~~i~~~g~~~~~~~~~~LL~W~~~~~~~~~~~~v~nF~~s~~DG~a~~aL 170 (245)
T 1sh5_A 91 LVNIRNDDIADGNPKLTLGLIWTIILHFQISDIQVSGQSEDMTAKEKLLLWSQRMVEGYQGLRCDNFTTSWRDGRLFNAI 170 (245)
T ss_dssp CCSCCHHHHHTTCHHHHHHHHHHHHHHHTTTTCCCTTCCSSCCHHHHHHHHHHHHTTTSTTCCCCCSSGGGTTSHHHHHH
T ss_pred ccCCChHhhhcccHHHHHHHHHHHHHhhcccccccccccccCCHHHHHHHHHHHHhccCCCcccCCccccccchHHHHHH
Confidence 11334577889999999999999999999
Q ss_pred HhhhCCCCC
Q psy4515 141 IHHFRPDLM 149 (149)
Q Consensus 141 i~~~rP~Li 149 (149)
+|+++|++|
T Consensus 171 i~~~~P~~i 179 (245)
T 1sh5_A 171 IHRHKPMLI 179 (245)
T ss_dssp HHTTCTTTC
T ss_pred HHHHCCCCC
Confidence 999999986
No 25
>3hoc_A Filamin-A; calponin homology domain, actin binding domain, acetylation, actin-binding, alternative splicing, cytoplasm, cytoskeleton; 2.30A {Homo sapiens} PDB: 3hop_A 3hor_A
Probab=99.08 E-value=6.3e-11 Score=96.66 Aligned_cols=89 Identities=20% Similarity=0.434 Sum_probs=69.1
Q ss_pred cchHHHHHHHHHHhhCCCCCeeecCCCcccccchhhhhhhhccCCCcc--Cc--------cc------------------
Q psy4515 60 RRGTKALEMWCRRVTEGYPGVRVDNMTSSWRDGLAFCALIHHFRPDLI--FY--------YA------------------ 111 (149)
Q Consensus 60 ~~~k~~LL~W~q~~~~~y~~v~v~nf~~sw~dG~a~~Alih~~rP~li--d~--------~~------------------ 111 (149)
.-+++++..|++.+..+. +..|+|+..+++||..+|.|+....|.-+ .+ ..
T Consensus 46 ~vQkktft~WiN~~L~~~-~~~V~dL~~DL~DGv~L~~Lle~Ls~~~l~~~~~~~p~~r~~kleNv~~aL~~lk~~gv~l 124 (272)
T 3hoc_A 46 KIQQNTFTRWCNEHLKCV-SKRIANLQTDLSDGLRLIALLEVLSQKKMHRKHNQRPTFRQMQLENVSVALEFLDRESIKL 124 (272)
T ss_dssp GHHHHHHHHHHHHHHGGG-TCCCSCTTTTTTTSHHHHHHHHHHHTSCCSSCCCSSCCSHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHHhccC-CCCcccHHHHHhhHHHHHHHHHHHcCCccccccCCCCccHHHHHHHHHHHHHHHHHcCCcc
Confidence 346789999999998664 57899999999999999999876443332 00 00
Q ss_pred ---------------------------------------------------hhccccCCCccccCCCCCcchhhhHHHHH
Q psy4515 112 ---------------------------------------------------TFFVTEGYPGVRVDNMTSSWRDGLAFCAL 140 (149)
Q Consensus 112 ---------------------------------------------------~~~vteg~p~V~v~nfs~sw~dgla~~al 140 (149)
+.|+...++++.|+||++||+||++||++
T Consensus 125 vnI~~~DIvdGn~kliLgLlW~Li~~~~i~~l~~~~e~~~~~~~~s~k~~LL~W~n~~~~~~~I~nFs~sw~DG~af~aL 204 (272)
T 3hoc_A 125 VSIDSKAIVDGNLKLILGLIWTLILHYSISMPMWDEEEDEEAKKQTPKQRLLGWIQNKLPQLPITNFSRDWQSGRALGAL 204 (272)
T ss_dssp SSCCHHHHHTTCHHHHHHHHHHHHHHHHTTCC------------CCHHHHHHHHHHHHCTTSCCCCSSGGGTTSHHHHHH
T ss_pred cccccchhhcCCHHHHHHHHHHHHHHHhhhhhhccccccccccccCHHHHHHHHHHhhCCCCCCCChhhcccchHHHHHH
Confidence 01223356789999999999999999999
Q ss_pred HhhhCCCCC
Q psy4515 141 IHHFRPDLM 149 (149)
Q Consensus 141 i~~~rP~Li 149 (149)
||+++|++|
T Consensus 205 i~~~~P~li 213 (272)
T 3hoc_A 205 VDSCAPGLC 213 (272)
T ss_dssp HHHHSTTSS
T ss_pred HHHhCcccc
Confidence 999999986
No 26
>1wjo_A T-plastin; CH domain, actin binding, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: a.40.1.1 PDB: 2d85_A
Probab=99.03 E-value=6.9e-11 Score=86.46 Aligned_cols=49 Identities=18% Similarity=0.323 Sum_probs=44.7
Q ss_pred hHHHHHHHHHHhhCC-CCCeeecCCC-cccccchhhhhhhhccCCCccCcc
Q psy4515 62 GTKALEMWCRRVTEG-YPGVRVDNMT-SSWRDGLAFCALIHHFRPDLIFYY 110 (149)
Q Consensus 62 ~k~~LL~W~q~~~~~-y~~v~v~nf~-~sw~dG~a~~Alih~~rP~lid~~ 110 (149)
..+.|++|||++++. +.+..|+||+ +||+||++||+|||.++|+.+||+
T Consensus 8 ~d~~ll~W~N~kl~~~g~~~~I~~F~d~sl~dG~~~l~Ll~~i~P~~vd~~ 58 (124)
T 1wjo_A 8 NDDIIVNWVNRTLSEAGKSTSIQSFKDKTISSSLAVVDLIDAIQPGCINYD 58 (124)
T ss_dssp CCHHHHHHHHHHHHHHTCSCCCSCTTCTTGGGTHHHHHHHHHHSTTSCCTT
T ss_pred CHHHHHHHHHHHHHhcCCCcccCCCCcchhhhhHHHHHHHHHHCcCccCHH
Confidence 468899999999975 4567899999 999999999999999999999998
No 27
>1dxx_A Dystrophin; structural protein, muscular dystrophy, calponin homology domain, actin-binding, utrophin; 2.6A {Homo sapiens} SCOP: a.40.1.1 a.40.1.1 PDB: 1qag_A
Probab=99.02 E-value=1.5e-10 Score=92.51 Aligned_cols=91 Identities=33% Similarity=0.500 Sum_probs=69.1
Q ss_pred ccchHHHHHHHHHHhhCCCCCeeecCCCcccccchhhhhhhhccCCCccCc-------cc--------------------
Q psy4515 59 ERRGTKALEMWCRRVTEGYPGVRVDNMTSSWRDGLAFCALIHHFRPDLIFY-------YA-------------------- 111 (149)
Q Consensus 59 ~~~~k~~LL~W~q~~~~~y~~v~v~nf~~sw~dG~a~~Alih~~rP~lid~-------~~-------------------- 111 (149)
....++++..|++........-.|+|+..+.+||..+|.|+....|.-++. ..
T Consensus 14 ~~~q~~~f~~WiN~~L~~~~~~~v~dl~~dl~DG~~L~~Lle~l~~~~~~~~~~~~~~~~~eNv~~aL~~~k~~g~~l~~ 93 (246)
T 1dxx_A 14 EDVQKKTFTKWVNAQFSKFGKQHIENLFSDLQDGRRLLDLLEGLTGQKLPKEKGSTRVHALNNVNKALRVLQNNNVDLVN 93 (246)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCCSCTTTTTTTSHHHHHHHHHHHSCCCCCCCCSSHHHHHHHHHHHHHHHHHTTCCCTT
T ss_pred HHHHHHHHHHHHHHhccccCCCCccCHHHHhCcHHHHHHHHHHHcCCcCCCCCCccHHHHHHHHHHHHHHHHHcCCcccc
Confidence 345678999999998854211168999999999999999887654332221 00
Q ss_pred --------------------------------------------------hhccccCCCccccCCCCCcchhhhHHHHHH
Q psy4515 112 --------------------------------------------------TFFVTEGYPGVRVDNMTSSWRDGLAFCALI 141 (149)
Q Consensus 112 --------------------------------------------------~~~vteg~p~V~v~nfs~sw~dgla~~ali 141 (149)
+...+++|+++.|+||++||+||++||+++
T Consensus 94 I~~~DIvdg~~~liL~Llw~li~~~~i~~~~~e~~~~~~~~~~~~~LL~W~~~~~~~~~~~~i~nFs~s~~DG~a~~aLi 173 (246)
T 1dxx_A 94 IGSTDIVDGNHKLTLGLIWNIILHWQVKNVMKNIMAGLQQTNSEKILLSWVRQSTRNYPQVNVINFTTSWSDGLALNALI 173 (246)
T ss_dssp CCHHHHHTTCHHHHHHHHHHHHHHHTTTHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCTTCCCCSSSGGGTTSHHHHHHH
T ss_pred CCHHHhhcccHHHHHHHHHHHHHHHHHhhhhhhhhhhcccccHHHHHHHHHHHHhccCCCCCcCCCcccchhHHHHHHHH
Confidence 112445788999999999999999999999
Q ss_pred hhhCCCCC
Q psy4515 142 HHFRPDLM 149 (149)
Q Consensus 142 ~~~rP~Li 149 (149)
|+++|+++
T Consensus 174 ~~~~P~li 181 (246)
T 1dxx_A 174 HSHRPDLF 181 (246)
T ss_dssp HHHCGGGS
T ss_pred HHHCcCcc
Confidence 99999875
No 28
>1bkr_A Spectrin beta chain; filamentous actin-binding domain, cytoskeleton; 1.10A {Homo sapiens} SCOP: a.40.1.1 PDB: 1aa2_A
Probab=98.99 E-value=1.2e-10 Score=83.11 Aligned_cols=38 Identities=58% Similarity=1.065 Sum_probs=34.9
Q ss_pred hhccccCCCccccCCCCCcchhhhHHHHHHhhhCCCCC
Q psy4515 112 TFFVTEGYPGVRVDNMTSSWRDGLAFCALIHHFRPDLM 149 (149)
Q Consensus 112 ~~~vteg~p~V~v~nfs~sw~dgla~~ali~~~rP~Li 149 (149)
++..+++|++++|+||++||+||++||++||++||++|
T Consensus 12 ~q~~~~~y~~v~v~nFs~sw~dG~af~aLih~~~P~li 49 (109)
T 1bkr_A 12 CQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLI 49 (109)
T ss_dssp HHHHTTTCTTCCCSSSSGGGTTSHHHHHHHHHHCGGGC
T ss_pred HHHHHccCCCCCCCCCcccccccHHHHHHHHHHCcCCC
Confidence 34677899999999999999999999999999999986
No 29
>1bhd_A Utrophin; calponin homology, actin binding, structural protein; 2.00A {Homo sapiens} SCOP: a.40.1.1
Probab=98.96 E-value=1.5e-10 Score=83.71 Aligned_cols=38 Identities=47% Similarity=0.775 Sum_probs=35.1
Q ss_pred hhccccCCCccccCCCCCcchhhhHHHHHHhhhCCCCC
Q psy4515 112 TFFVTEGYPGVRVDNMTSSWRDGLAFCALIHHFRPDLM 149 (149)
Q Consensus 112 ~~~vteg~p~V~v~nfs~sw~dgla~~ali~~~rP~Li 149 (149)
++..+++|++++|+||++||+||++||++||++||++|
T Consensus 17 ~q~~~~~y~~v~v~nFs~sw~DG~af~aLih~~~P~li 54 (118)
T 1bhd_A 17 VRQTTRPYSQVNVLNFTTSWTDGLAFNAVLHRHKPDLF 54 (118)
T ss_dssp HHHHHTTSTTCCCCSSSGGGTTSHHHHHHHHHHCGGGS
T ss_pred HHHHhccCCCCCCCCCcccccCcHHHHHHHHHHCcCcC
Confidence 44678899999999999999999999999999999986
No 30
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1
Probab=98.94 E-value=5.2e-10 Score=101.69 Aligned_cols=89 Identities=31% Similarity=0.648 Sum_probs=72.9
Q ss_pred cchHHHHHHHHHHhhCCCCCeeecCCCcccccchhhhhhhhccCCCccCcc-c---------------------------
Q psy4515 60 RRGTKALEMWCRRVTEGYPGVRVDNMTSSWRDGLAFCALIHHFRPDLIFYY-A--------------------------- 111 (149)
Q Consensus 60 ~~~k~~LL~W~q~~~~~y~~v~v~nf~~sw~dG~a~~Alih~~rP~lid~~-~--------------------------- 111 (149)
...++++..|++....+. +..|+|+-.+.+||..+|.|+....|+-++-- .
T Consensus 7 ~~q~~~f~~Win~~L~~~-~~~v~~l~~dl~DG~~L~~l~e~l~~~~~~~~~~~~~~~~~~eN~~~~l~~~~~~g~~~~~ 85 (863)
T 1sjj_A 7 KQQRKTFTAWCNSHLRKA-GTQIENIEEDFRDGLKLMLLLEVISGERLAKPERGKMRVHKISNVNKALDFIASKGVKLVS 85 (863)
T ss_dssp HHHHHHHHHHHHHHHHHH-CSCCCCCSSTTSSCHHHHHHHHHTSCCCCCCSCCCSSHHHHHHHHHHHHHHHHHTTCCCTT
T ss_pred HHHHHHHHHHHHHHhccC-CCCccCHHHHhcCHHHHHHHHHHhCCCceeCCCCCccHHHHHHHHHHHHHHHHHcCCccCC
Confidence 346789999999997653 46789999999999999999987776655320 0
Q ss_pred --------------------------------------------hhccccCCCccccCCCCCcchhhhHHHHHHhhhCCC
Q psy4515 112 --------------------------------------------TFFVTEGYPGVRVDNMTSSWRDGLAFCALIHHFRPD 147 (149)
Q Consensus 112 --------------------------------------------~~~vteg~p~V~v~nfs~sw~dgla~~ali~~~rP~ 147 (149)
+...+++|+++.|+||++||+||++||++||+++|+
T Consensus 86 i~~~di~~g~~~~~l~l~w~l~~~~~~~~~~~~~~~~~~~ll~W~~~~~~~~~~~~v~nf~~s~~dg~~~~~li~~~~p~ 165 (863)
T 1sjj_A 86 IGAEEIVDGNVKMTLGMIWTIILRFAIQDISVEETSAKEGLLLWYQRKTAPYKNVNIQNFHISWKDGLGFCALIHRHRPE 165 (863)
T ss_dssp CCSHHHHTTCHHHHHHHHHHHHSCCCCCCCCCCCCCSTTTTHHHHHHHHTTSTTCCCCSSSGGGTTSHHHHHHHHTTCCS
T ss_pred CChHHhhcCCHHHHHHHHHHHHHHHhhcccchhccchHHHHHHHHHHhccCCCCCCCCCCccccccHHHHHHHHHHhCCC
Confidence 113456899999999999999999999999999999
Q ss_pred CC
Q psy4515 148 LM 149 (149)
Q Consensus 148 Li 149 (149)
+|
T Consensus 166 ~~ 167 (863)
T 1sjj_A 166 LI 167 (863)
T ss_dssp SS
T ss_pred Cc
Confidence 86
No 31
>2wa7_A Filamin-B; disease mutation, skeletal dysplasia, structural protein, actin-crosslinking, myogenesis, cytoskeleton; 1.85A {Homo sapiens} PDB: 2wa5_A 2wa6_A 3fer_A
Probab=98.93 E-value=5.7e-10 Score=89.22 Aligned_cols=89 Identities=21% Similarity=0.439 Sum_probs=67.3
Q ss_pred cchHHHHHHHHHHhhCCCCCeeecCCCcccccchhhhhhhhccCCCcc----------Cccc------------------
Q psy4515 60 RRGTKALEMWCRRVTEGYPGVRVDNMTSSWRDGLAFCALIHHFRPDLI----------FYYA------------------ 111 (149)
Q Consensus 60 ~~~k~~LL~W~q~~~~~y~~v~v~nf~~sw~dG~a~~Alih~~rP~li----------d~~~------------------ 111 (149)
..+++++..|++..+.+. +..|+|+-.+.+||..+|.|+....|..+ .+..
T Consensus 19 ~~q~~~f~~WiN~~L~~~-~~~v~dl~~dL~DGv~L~~Lle~L~~~~~~~~~n~~~~~~~~~~eNv~~aL~~~k~~g~~l 97 (245)
T 2wa7_A 19 KIQQNTFTRWCNEHLKCV-NKRIGNLQTDLSDGLRLIALLEVLSQKRMYRKYHQRPTFRQMQLENVSVALEFLDRESIKL 97 (245)
T ss_dssp GHHHHHHHHHHHHHHGGG-TCCCSCTTTTTTTSHHHHHHHHHHHTCCCSSCCCSSCCSHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHhcccc-CCCccCHHHHcccHHHHHHHHHHHcCCCCchhcCCCCCcHHHHHHHHHHHHHHHHHcCCcc
Confidence 346789999999998664 56789999999999999999875443322 0000
Q ss_pred ---------------------------------------------------hhccccCCCccccCCCCCcchhhhHHHHH
Q psy4515 112 ---------------------------------------------------TFFVTEGYPGVRVDNMTSSWRDGLAFCAL 140 (149)
Q Consensus 112 ---------------------------------------------------~~~vteg~p~V~v~nfs~sw~dgla~~al 140 (149)
+.|+...++++.|+||++||+||++||++
T Consensus 98 v~I~~~DIvdG~~kliLgLlW~li~~~~i~~~~~~~~~~~~~~~~~~~~~LL~W~~~~~~~~~v~nFs~s~~dG~a~~aL 177 (245)
T 2wa7_A 98 VSIDSKAIVDGNLKLILGLVWTLILHYSISMPVWEDEGDDDAKKQTPKQRLLGWIQNKIPYLPITNFNQNWQDGKALGAL 177 (245)
T ss_dssp CSCCHHHHHTTCHHHHHHHHHHHHHHHHTTSSCCSSCC----CCCCHHHHHHHHHHHHSTTSCCCCSSGGGTTSHHHHHH
T ss_pred cCCCHHHhhCCCHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHhCCCCCCCCCcccchhhHHHHHH
Confidence 00111234578999999999999999999
Q ss_pred HhhhCCCCC
Q psy4515 141 IHHFRPDLM 149 (149)
Q Consensus 141 i~~~rP~Li 149 (149)
+|+++|+++
T Consensus 178 i~~~~P~~i 186 (245)
T 2wa7_A 178 VDSCAPGLC 186 (245)
T ss_dssp HHHHSTTSS
T ss_pred HHHHCcccc
Confidence 999999975
No 32
>1wyq_A Spectrin beta chain, brain 2; NPPSFA, structural genomics, riken structural genomics/proteomics initiative, RSGI, structural protein; NMR {Homo sapiens}
Probab=98.93 E-value=2.9e-10 Score=83.17 Aligned_cols=38 Identities=58% Similarity=1.062 Sum_probs=34.9
Q ss_pred hhccccCCCccccCCCCCcchhhhHHHHHHhhhCCCCC
Q psy4515 112 TFFVTEGYPGVRVDNMTSSWRDGLAFCALIHHFRPDLM 149 (149)
Q Consensus 112 ~~~vteg~p~V~v~nfs~sw~dgla~~ali~~~rP~Li 149 (149)
++..+++|++++|+||++||+||++||++||+++|++|
T Consensus 16 ~q~~~~~y~~v~V~nFs~sw~DG~Af~aLih~~~P~li 53 (127)
T 1wyq_A 16 CQMKTAGYPNVNVHNFTTSWRDGLAFNAIVHKHRPDLL 53 (127)
T ss_dssp HHHHHHTSSSCCCSCSSTTSSSSHHHHHHHHHHCTTTC
T ss_pred HHHHHhcCCCCCCCCCcccccccHHHHHHHHHHCcCcC
Confidence 34577899999999999999999999999999999986
No 33
>1wyl_A NEDD9 interacting protein with calponin homology and LIM domains; CH domain, mical, structural genomics; NMR {Homo sapiens} PDB: 2dk9_A
Probab=98.92 E-value=2.5e-10 Score=82.21 Aligned_cols=38 Identities=50% Similarity=0.983 Sum_probs=34.8
Q ss_pred hhccccCCCccccCCCCCcchhhhHHHHHHhhhCCCCC
Q psy4515 112 TFFVTEGYPGVRVDNMTSSWRDGLAFCALIHHFRPDLM 149 (149)
Q Consensus 112 ~~~vteg~p~V~v~nfs~sw~dgla~~ali~~~rP~Li 149 (149)
++.++++|++++|+||++||+||++||++||++||++|
T Consensus 16 ~q~~~~~y~~v~v~nFs~sw~dG~af~aLih~~~P~li 53 (116)
T 1wyl_A 16 CQEQTAGYPGVHVSDLSSSWADGLALCALVYRLQPGLL 53 (116)
T ss_dssp HHHHHHHSTTCCCSCTTTTTTSSHHHHHHHHHHCTTSC
T ss_pred HHHHhccCCCCCCCCccccccccHHHHHHHHHHCcCCC
Confidence 34567789999999999999999999999999999986
No 34
>2d88_A Protein mical-3; all alpha, calponin homology domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2e9k_A
Probab=98.90 E-value=4.2e-10 Score=81.66 Aligned_cols=38 Identities=53% Similarity=1.073 Sum_probs=35.3
Q ss_pred hhccccCCCccccCCCCCcchhhhHHHHHHhhhCCCCC
Q psy4515 112 TFFVTEGYPGVRVDNMTSSWRDGLAFCALIHHFRPDLM 149 (149)
Q Consensus 112 ~~~vteg~p~V~v~nfs~sw~dgla~~ali~~~rP~Li 149 (149)
++.++++|+++.|+||++||+||++||++||+++|++|
T Consensus 18 ~q~~~~~y~~v~v~nFs~sw~DG~af~aLih~~~P~li 55 (121)
T 2d88_A 18 CQRQTDGYAGVNVTDLTMSWKSGLALCAIIHRYRPDLI 55 (121)
T ss_dssp HHHHSTTSSSCCCCCSSHHHHTSHHHHHHHHHHCTTTS
T ss_pred HHHHhccCCCCCCCCchhhccccHHHHHHHHHhCcCcC
Confidence 45678899999999999999999999999999999986
No 35
>2d87_A Smoothelin splice isoform L2; all alpha, calponin homology domain, actin binding, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2jv9_A 2k3s_A
Probab=98.89 E-value=6.5e-10 Score=81.44 Aligned_cols=38 Identities=47% Similarity=0.932 Sum_probs=35.0
Q ss_pred hhccccCCCccccCCCCCcchhhhHHHHHHhhhCCCCC
Q psy4515 112 TFFVTEGYPGVRVDNMTSSWRDGLAFCALIHHFRPDLM 149 (149)
Q Consensus 112 ~~~vteg~p~V~v~nfs~sw~dgla~~ali~~~rP~Li 149 (149)
++.++++|+++.|+||++||+||++||++||++||++|
T Consensus 16 ~q~~~~~y~~v~V~nFs~sw~DG~af~aLih~~~P~li 53 (128)
T 2d87_A 16 CRAKTRGYEHVDIQNFSSSWSDGMAFCALVHNFFPEAF 53 (128)
T ss_dssp HHHHSSSCTTCCCSCTTTTTTSSHHHHHHHHHHCTTTS
T ss_pred HHHHhccCCCCCCCCccccccccHHHHHHHHHHCcCcC
Confidence 34678889999999999999999999999999999986
No 36
>2d89_A EHBP1 protein; all alpha, calponin homology domain, actin binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.86 E-value=7.4e-10 Score=80.06 Aligned_cols=38 Identities=58% Similarity=1.191 Sum_probs=35.1
Q ss_pred hhccccCCCccccCCCCCcchhhhHHHHHHhhhCCCCC
Q psy4515 112 TFFVTEGYPGVRVDNMTSSWRDGLAFCALIHHFRPDLM 149 (149)
Q Consensus 112 ~~~vteg~p~V~v~nfs~sw~dgla~~ali~~~rP~Li 149 (149)
++..+++|+++.|+||++||+||++||++||++||++|
T Consensus 18 ~~~~~~~y~~v~v~nFs~sw~dG~af~aLi~~~~P~li 55 (119)
T 2d89_A 18 CKEVTKNYRGVKITNFTTSWRNGLSFCAILHHFRPDLI 55 (119)
T ss_dssp HHHHTTTCSSCCCCCSSHHHHTTHHHHHHHHHHCTTTS
T ss_pred HHHHhccCCCCCCCCccccccccHHHHHHHHHHCcCcC
Confidence 44678899999999999999999999999999999986
No 37
>1aoa_A T-fimbrin; actin-binding protein, calcium-binding, phosphorylation; 2.40A {Homo sapiens} SCOP: a.40.1.1 a.40.1.1
Probab=98.48 E-value=7.7e-08 Score=77.84 Aligned_cols=47 Identities=26% Similarity=0.467 Sum_probs=38.2
Q ss_pred hHHHHHHHHHHhhCCCC------Ce--eecCCCcccccchhhhhhhhccCCCccC
Q psy4515 62 GTKALEMWCRRVTEGYP------GV--RVDNMTSSWRDGLAFCALIHHFRPDLIF 108 (149)
Q Consensus 62 ~k~~LL~W~q~~~~~y~------~v--~v~nf~~sw~dG~a~~Alih~~rP~lid 108 (149)
.++++..|++..+...+ .+ .|+||..+++||..+|.|+....|+.++
T Consensus 25 q~~~f~~WiN~~L~~~~~~~~~~~i~~~v~dl~~dL~DGv~L~~Lle~l~~~~v~ 79 (275)
T 1aoa_A 25 EKYAFVNWINKALENDPDCRHVIPMNPNTDDLFKAVGDGIVLCKMINLSVPDTID 79 (275)
T ss_dssp HHHHHHHHHHHHTTTCTTSTTTCSCCTTTTHHHHHGGGSHHHHHHHHHHSTTSSC
T ss_pred HHHHHHHHHHHHhccCccccccCCCCCccchHHHHhccHHHHHHHHHHhcCCCCC
Confidence 57899999999987643 22 4789999999999999999887776554
No 38
>1wjo_A T-plastin; CH domain, actin binding, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: a.40.1.1 PDB: 2d85_A
Probab=97.13 E-value=0.00019 Score=52.19 Aligned_cols=32 Identities=16% Similarity=0.295 Sum_probs=28.6
Q ss_pred CCCccccCCCC-CcchhhhHHHHHHhhhCCCCC
Q psy4515 118 GYPGVRVDNMT-SSWRDGLAFCALIHHFRPDLM 149 (149)
Q Consensus 118 g~p~V~v~nfs-~sw~dgla~~ali~~~rP~Li 149 (149)
....+.|+||+ ++|+||++||+++++++|+.|
T Consensus 23 ~g~~~~I~~F~d~sl~dG~~~l~Ll~~i~P~~v 55 (124)
T 1wjo_A 23 AGKSTSIQSFKDKTISSSLAVVDLIDAIQPGCI 55 (124)
T ss_dssp HTCSCCCSCTTCTTGGGTHHHHHHHHHHSTTSC
T ss_pred cCCCcccCCCCcchhhhhHHHHHHHHHHCcCcc
Confidence 34567899999 999999999999999999975
No 39
>2vzc_A Alpha-parvin; membrane, cytoplasm, cytoskeleton, cell junction, alternative splicing, calponin homology domain, actin-binding, cell membrane; 1.05A {Homo sapiens} PDB: 2vzd_A* 2vzg_B* 2vzi_B* 2k2r_A 3kmu_B 3kmw_B* 3rep_B*
Probab=96.07 E-value=0.0042 Score=45.03 Aligned_cols=48 Identities=13% Similarity=0.216 Sum_probs=41.3
Q ss_pred chHHHHHHHHHHhhCCCCCeeecCCCcccccchhhhhhhhccCCCccCc
Q psy4515 61 RGTKALEMWCRRVTEGYPGVRVDNMTSSWRDGLAFCALIHHFRPDLIFY 109 (149)
Q Consensus 61 ~~k~~LL~W~q~~~~~y~~v~v~nf~~sw~dG~a~~Alih~~rP~lid~ 109 (149)
.+++++..|++.+...+ ++.|+|+..+.+||..++.++....|+.+++
T Consensus 22 ~q~ktft~WiN~~L~~~-~~~v~dL~~Dl~DGv~L~~Lle~ls~~~~~~ 69 (131)
T 2vzc_A 22 VVKKTLITFVNKHLNKL-NLEVTELETQFADGVYLVLLMGLLEGYFVPL 69 (131)
T ss_dssp HHHHHHHHHHHHHHGGG-TCCCCCTTTTTTTSHHHHHHHHHHTTCCCCT
T ss_pred HHHHHHHHHHHHHHHHc-CCcccCHHHHcccHHHHHHHHHHhcCCCCCH
Confidence 35789999999998765 5789999999999999999999887776654
No 40
>2qjz_A Microtubule-associated protein RP/EB family member 1; calponin homology domain, microtubule plus END, +TIP, protein binding; 1.25A {Homo sapiens} SCOP: a.40.1.1 PDB: 1pa7_A 1ueg_A 3co1_A 1v5k_A
Probab=94.47 E-value=0.037 Score=39.86 Aligned_cols=76 Identities=14% Similarity=0.283 Sum_probs=50.2
Q ss_pred hHHHHHHHHHHhhCC-CCCeeecCCCcccccchhhhhhhhccCCCccCccch--------------------hccccCCC
Q psy4515 62 GTKALEMWCRRVTEG-YPGVRVDNMTSSWRDGLAFCALIHHFRPDLIFYYAT--------------------FFVTEGYP 120 (149)
Q Consensus 62 ~k~~LL~W~q~~~~~-y~~v~v~nf~~sw~dG~a~~Alih~~rP~lid~~~~--------------------~~vteg~p 120 (149)
++..||.|+++.++. |+.+ ..-+||.++|-|++...|+.|++..+ +.......
T Consensus 6 sr~ElL~WIN~~L~~~~~ki------E~L~~Ga~yCqlmd~l~Pg~v~l~KVkf~a~~e~e~~~N~k~lq~af~k~gV~k 79 (123)
T 2qjz_A 6 SRHDMLAWINESLQLNLTKI------EQLCSGAAYCQFMDMLFPGSIALKKVKFQAKLEHEYIQNFKILQAGFKRMGVDK 79 (123)
T ss_dssp CHHHHHHHHHHHHTCCCCCG------GGGGGSHHHHHHHHHHSTTSSCGGGCCTTCCSHHHHHHHHHHHHHHHHHHTCCC
T ss_pred cHHHHHHHHHHHHCCCCchH------HHcCchHHHHHHHHHHccCCCcHHHhccCCCChHHHHHHHHHHHHHHHHcCCCC
Confidence 567899999999843 3332 35789999999999999999986542 12222234
Q ss_pred ccccCCCCCc-chhhhHHHHHHhh
Q psy4515 121 GVRVDNMTSS-WRDGLAFCALIHH 143 (149)
Q Consensus 121 ~V~v~nfs~s-w~dgla~~ali~~ 143 (149)
.+.|+.+..+ ..|-+-|+--++.
T Consensus 80 ~i~v~kLvkgk~qdnleflqW~k~ 103 (123)
T 2qjz_A 80 IIPVDKLVKGKFQDNFEFVQWFKK 103 (123)
T ss_dssp CCCHHHHTTCCHHHHHHHHHHHHH
T ss_pred ccCHHHHHcCCchhHHHHHHHHHH
Confidence 4566665544 3555666555544
No 41
>2yrn_A Neuron navigator 2 isoform 4; calponin homolgy domain, helicase, all alpha, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.02 E-value=0.015 Score=41.60 Aligned_cols=47 Identities=13% Similarity=0.253 Sum_probs=38.3
Q ss_pred chHHHHHHHHHHhhCCCCCe--eecCCCcccccchhhhhhhhccCCCccC
Q psy4515 61 RGTKALEMWCRRVTEGYPGV--RVDNMTSSWRDGLAFCALIHHFRPDLIF 108 (149)
Q Consensus 61 ~~k~~LL~W~q~~~~~y~~v--~v~nf~~sw~dG~a~~Alih~~rP~lid 108 (149)
..++++..|++..+... ++ .|+||..+.+||..+|.|+....|+-++
T Consensus 18 ~q~~~f~~WIN~~L~~~-~~~~~v~dl~~dL~DGv~L~~Lle~L~~~~l~ 66 (129)
T 2yrn_A 18 DQKRIYTDWANHYLAKS-GHKRLIRDLQQDVTDGVLLAQIIQVVANEKIE 66 (129)
T ss_dssp HHHHHHHHHHHHHHHHT-CCCSCCSCHHHHSSSSHHHHHHHHHHTTCCCT
T ss_pred HHHHHHHHHHHHHhccc-CCCccchhHHHHcccHHHHHHHHHHHhcCCcc
Confidence 35689999999987543 33 4899999999999999999988777663
No 42
>2ee7_A Sperm flagellar protein 1; all alpha protein, CH domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=93.70 E-value=0.023 Score=41.21 Aligned_cols=46 Identities=15% Similarity=0.388 Sum_probs=37.3
Q ss_pred HHHHHHHHHHhhCCCCCeeecCCCcccccchhhhhhhhccCCCccCccc
Q psy4515 63 TKALEMWCRRVTEGYPGVRVDNMTSSWRDGLAFCALIHHFRPDLIFYYA 111 (149)
Q Consensus 63 k~~LL~W~q~~~~~y~~v~v~nf~~sw~dG~a~~Alih~~rP~lid~~~ 111 (149)
...|+.|++...=.+ .++|+..+|.||+.+-.|+++|.|.++|+..
T Consensus 17 ~~el~~WL~~l~Ls~---~~rn~rRDFSdG~lvAEIl~~y~Pk~Vdlh~ 62 (127)
T 2ee7_A 17 LHQLYLWVDNIPLSR---PKRNLSRDFSDGVLVAEVIKFYFPKMVEMHN 62 (127)
T ss_dssp HHHHHHHHHHSCCSC---CSSCHHHHHTTSHHHHHHHHHHCTTTCCCSS
T ss_pred HHHHHHHHHcCCCCC---CCCchhhhccchhHHHHHHHHHCcCcccccc
Confidence 467999999544333 4788899999999999999999999997654
No 43
>1wyo_A Protein EB3, microtubule-associated protein RP/EB family member 3; CH domain, microtubule-binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=93.60 E-value=0.064 Score=40.33 Aligned_cols=77 Identities=14% Similarity=0.336 Sum_probs=50.3
Q ss_pred hHHHHHHHHHHhhCC-CCCeeecCCCcccccchhhhhhhhccCCCccCccch--------------------hccccCCC
Q psy4515 62 GTKALEMWCRRVTEG-YPGVRVDNMTSSWRDGLAFCALIHHFRPDLIFYYAT--------------------FFVTEGYP 120 (149)
Q Consensus 62 ~k~~LL~W~q~~~~~-y~~v~v~nf~~sw~dG~a~~Alih~~rP~lid~~~~--------------------~~vteg~p 120 (149)
++..||.|+++.+.. |+.+ ..-+||.++|-|++...|+.|++..+ +.......
T Consensus 23 sr~ElL~WIN~~L~~~~~ki------E~L~~GaayCQLmd~L~PgsV~l~KVkf~a~~e~e~~~N~k~lQ~af~k~gV~k 96 (159)
T 1wyo_A 23 SRHDMLAWVNDSLHLNYTKI------EQLCSGAAYCQFMDMLFPGCVHLRKVKFQAKLEHEYIHNFKVLQAAFKKMGVDK 96 (159)
T ss_dssp CHHHHHHHHHHHSCCCCSSG------GGGGGCHHHHHHHHHHSTTSSCTTSCCTTCCSSHHHHHHHHHHHHHHHHHTCCC
T ss_pred hHHHHHHHHHHHHCCCCchh------hhcCccHHHHHHHHHHccCCCcHhhhccCCCChHHHHHHHHHHHHHHHHcCCCC
Confidence 567899999999843 3322 35789999999999999998875431 11122224
Q ss_pred ccccCCCCCc-chhhhHHHHHHhhh
Q psy4515 121 GVRVDNMTSS-WRDGLAFCALIHHF 144 (149)
Q Consensus 121 ~V~v~nfs~s-w~dgla~~ali~~~ 144 (149)
.+.|+.+..+ ..|-+-|+--++.|
T Consensus 97 ~ipV~kLvkgk~qdNlEFlqWfk~f 121 (159)
T 1wyo_A 97 IIPVEKLVKGKFQDNFEFIQWFKKF 121 (159)
T ss_dssp CCCHHHHTTTCSHHHHHHHHHHHHH
T ss_pred ccCHHHHhcCCchhHHHHHHHHHHH
Confidence 4566665544 45666666655543
No 44
>2r8u_A Microtubule-associated protein RP/EB family member 1; cytoskeleton, acetylation, cell cycle, cell division, cytoplasm, mitosis, phosphorylation; 1.35A {Homo sapiens} SCOP: a.40.1.1 PDB: 1vka_A 1txq_B 1wu9_A 2hkq_A 2hl5_A 3tq7_A 3gjo_A 1yib_A 1yig_A
Probab=87.77 E-value=0.51 Score=38.14 Aligned_cols=77 Identities=14% Similarity=0.297 Sum_probs=51.0
Q ss_pred chHHHHHHHHHHhhCC-CCCeeecCCCcccccchhhhhhhhccCCCccCccch--------------------hccccCC
Q psy4515 61 RGTKALEMWCRRVTEG-YPGVRVDNMTSSWRDGLAFCALIHHFRPDLIFYYAT--------------------FFVTEGY 119 (149)
Q Consensus 61 ~~k~~LL~W~q~~~~~-y~~v~v~nf~~sw~dG~a~~Alih~~rP~lid~~~~--------------------~~vteg~ 119 (149)
-++..||.|++..+.. |. .|. .-.+|-|+|-+++...|+.|++..+ |......
T Consensus 15 ~sR~elL~WiN~~L~~~~~--kiE----el~tGaayCQlmd~l~P~~i~l~kVkf~a~~e~e~i~N~k~LQ~~F~k~~I~ 88 (268)
T 2r8u_A 15 LSRHDMLAWINESLQLNLT--KIE----QLCSGAAYCQFMDMLFPGSIALKKVKFQAKLEHEYIQNFKILQAGFKRMGVD 88 (268)
T ss_dssp CCHHHHHHHHHHHHTCCCC--CGG----GGGGSHHHHHHHHHHSTTSSCGGGCCTTCCSHHHHHHHHHHHHHHHHHTTCC
T ss_pred cCHHHHHHHHHHHhcCCcc--hHH----HcccchHHHHHHHHHccCCCchhhccCCCCCHHHHHHHHHHHHHHHHHcCCC
Confidence 3568899999998854 22 233 3566999999999999999987762 2222233
Q ss_pred CccccCCCCCc-chhhhHHHHHHhh
Q psy4515 120 PGVRVDNMTSS-WRDGLAFCALIHH 143 (149)
Q Consensus 120 p~V~v~nfs~s-w~dgla~~ali~~ 143 (149)
..+.|+.+..+ ..|-+-|+--++.
T Consensus 89 k~ipV~kLvkgk~qDNlEFlqWfkk 113 (268)
T 2r8u_A 89 KIIPVDKLVKGKFQDNFEFVQWFKK 113 (268)
T ss_dssp CCCCHHHHTTTCHHHHHHHHHHHHH
T ss_pred CccCHHHHhccCchhHHHHHHHHHH
Confidence 45666665554 4566666655544
No 45
>1wyp_A Calponin 1; CH domain, F-actin binding, all-alpha, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens}
Probab=85.74 E-value=0.56 Score=33.79 Aligned_cols=42 Identities=24% Similarity=0.597 Sum_probs=35.7
Q ss_pred HHHHHHHHHHhhCCCCCeeecCCCcccccchhhhhhhhccCCCcc
Q psy4515 63 TKALEMWCRRVTEGYPGVRVDNMTSSWRDGLAFCALIHHFRPDLI 107 (149)
Q Consensus 63 k~~LL~W~q~~~~~y~~v~v~nf~~sw~dG~a~~Alih~~rP~li 107 (149)
++.+..|....+..- + -.+|....+||..+|-|+.+..|+.+
T Consensus 19 ~~e~~~WIe~~l~~~--~-~~~l~~~L~DGvvLCkL~N~l~P~~v 60 (136)
T 1wyp_A 19 EQELREWIEGVTGRR--I-GNNFMDGLKDGIILCEFINKLQPGSV 60 (136)
T ss_dssp HHHHHHHHHHHTCCC--C-CSCTTHHHHTSHHHHHHHHHHSTTSS
T ss_pred HHHHHHHHHHHhCCC--C-cHHHHHHHccHHhHHHHHHhhCCCCc
Confidence 467999999998653 2 26888999999999999999999877
No 46
>1h67_A Calponin alpha; cytoskeleton, calponin homology domain, actin binding,; NMR {Gallus gallus} SCOP: a.40.1.1
Probab=85.69 E-value=0.26 Score=34.09 Aligned_cols=42 Identities=26% Similarity=0.615 Sum_probs=34.9
Q ss_pred HHHHHHHHHhhCCCCCeeecCCCcccccchhhhhhhhccCCCccC
Q psy4515 64 KALEMWCRRVTEGYPGVRVDNMTSSWRDGLAFCALIHHFRPDLIF 108 (149)
Q Consensus 64 ~~LL~W~q~~~~~y~~v~v~nf~~sw~dG~a~~Alih~~rP~lid 108 (149)
+.+..|....+..- + -.+|....+||..+|-|+.+.+|+.++
T Consensus 6 ~e~~~WIe~~l~~~--~-~~~l~~~L~dGvvLCkL~N~l~P~~v~ 47 (108)
T 1h67_A 6 RQLRVWIEGATGRR--I-GDNFMDGLKDGVILCELINKLQPGSVQ 47 (108)
T ss_dssp HHHHHHHHHHHSCC--C-CSCHHHHHHHCSHHHHHHHHHSTTSST
T ss_pred HHHHHHHHHHhCCC--C-cHHHHHHHccHHHHHHHHHHhCCCCcc
Confidence 56889999998653 2 257888999999999999999998874
No 47
>1ujo_A Transgelin; CH domain, actin binding, structural genomics, riken structural genomics/proteomics initiative, RSGI, structural protein; NMR {Mus musculus} SCOP: a.40.1.1
Probab=82.39 E-value=0.69 Score=33.64 Aligned_cols=46 Identities=13% Similarity=0.172 Sum_probs=35.6
Q ss_pred HHHHHHHHHHhhCCCCC---eeecCCCcccccchhhhhhhhccCC---CccC
Q psy4515 63 TKALEMWCRRVTEGYPG---VRVDNMTSSWRDGLAFCALIHHFRP---DLIF 108 (149)
Q Consensus 63 k~~LL~W~q~~~~~y~~---v~v~nf~~sw~dG~a~~Alih~~rP---~lid 108 (149)
++.+..|....+...-. -.-.+|....+||..+|-|+.+.+| +.|+
T Consensus 11 e~e~~~WIe~~l~~~l~~~~~~~~~f~~~LkDGvvLCkL~N~l~P~~~~~I~ 62 (144)
T 1ujo_A 11 EERLVEWIVVQCGPDVGRPDRGRLGFQVWLKNGVILSKLVNSLYPEGSKPVK 62 (144)
T ss_dssp HHHHHHHHHHHHCTTTCCCCSSSSSHHHHTTSSHHHHHHHHHHSCTTTCCSC
T ss_pred HHHHHHHHHHHhCCCCCCcCCcHHHHHHHHcchHHHHHHHHHhCcccCCCcc
Confidence 46799999998864211 1235788899999999999999999 6665
No 48
>1wyn_A Calponin-2; CH domain, F-actin binding, all alpha helix, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens}
Probab=81.14 E-value=0.69 Score=33.75 Aligned_cols=42 Identities=19% Similarity=0.495 Sum_probs=35.3
Q ss_pred HHHHHHHHHHhhCCCCCeeecCCCcccccchhhhhhhhccCCCcc
Q psy4515 63 TKALEMWCRRVTEGYPGVRVDNMTSSWRDGLAFCALIHHFRPDLI 107 (149)
Q Consensus 63 k~~LL~W~q~~~~~y~~v~v~nf~~sw~dG~a~~Alih~~rP~li 107 (149)
.+.+..|....+..- + -.+|....+||.++|-|+.+..|+.+
T Consensus 19 ~~e~~~WIe~~l~~~--i-~~~l~~~L~DGvvLCkL~N~l~P~~v 60 (146)
T 1wyn_A 19 EAELRTWIEGLTGLS--I-GPDFQKGLKDGTILCTLMNKLQPGSV 60 (146)
T ss_dssp HHHHHHHHHHHHCCC--C-CSCHHHHHHTTSHHHHHHHHHCTTSC
T ss_pred HHHHHHHHHHHhCCC--C-cHHHHHHHccHHHHHHHHHHhCCCCc
Confidence 467999999999642 2 26788899999999999999999877
No 49
>3i6x_A P195, RAS GTPase-activating-like protein iqgap1; all helical, calmodulin-binding, cell membrane, membrane, phosphoprotein, protein binding; 2.50A {Homo sapiens}
Probab=77.62 E-value=0.92 Score=34.71 Aligned_cols=45 Identities=13% Similarity=0.340 Sum_probs=36.1
Q ss_pred HHHHHHHHHHhhCCCCCee-ecCCCcccccchhhhhhhhccCCCccCc
Q psy4515 63 TKALEMWCRRVTEGYPGVR-VDNMTSSWRDGLAFCALIHHFRPDLIFY 109 (149)
Q Consensus 63 k~~LL~W~q~~~~~y~~v~-v~nf~~sw~dG~a~~Alih~~rP~lid~ 109 (149)
.+.+..|....+.. .+. ..+|....+||..+|-|+.+.+|+.++.
T Consensus 49 ~~e~~~WIe~~lg~--~l~~~~~l~~~LrdGvvLCkL~N~l~Pg~vp~ 94 (193)
T 3i6x_A 49 LEEAKRWMEACLGE--DLPPTTELEEGLRNGVYLAKLGNFFSPKVVSL 94 (193)
T ss_dssp HHHHHHHHHHHHSS--CCCCGGGHHHHHTTSHHHHHHHHHHCTTTCCG
T ss_pred HHHHHHHHHHHhCC--CCCChHHHHHHhccHHHHHHHHHHHCCCCCCc
Confidence 45688999999864 222 2478889999999999999999998863
No 50
>1p5s_A RAS GTPase-activating-like protein RNG2; alpha-helical bundle, cytokine; 2.22A {Schizosaccharomyces pombe} SCOP: a.40.1.1
Probab=77.50 E-value=1.1 Score=34.58 Aligned_cols=43 Identities=19% Similarity=0.460 Sum_probs=35.0
Q ss_pred HHHHHHHHHHhhCCCCCe-eecCCCcccccchhhhhhhhccCCCcc
Q psy4515 63 TKALEMWCRRVTEGYPGV-RVDNMTSSWRDGLAFCALIHHFRPDLI 107 (149)
Q Consensus 63 k~~LL~W~q~~~~~y~~v-~v~nf~~sw~dG~a~~Alih~~rP~li 107 (149)
.+.+..|....+... + ...+|....+||..+|-|+.+.+|+.+
T Consensus 57 ~~e~~~WIe~~l~~~--l~~~~~f~~~LrDGvvLCkLiN~l~P~sv 100 (203)
T 1p5s_A 57 VDEAKKWIEECLGTD--LGPTSTFEQSLRNGVVLALLVQKFQPDKL 100 (203)
T ss_dssp HHHHHHHHHHHHTSC--CCCGGGHHHHHTTSHHHHHHHHHHCTTSC
T ss_pred HHHHHHHHHHHhCCC--CCChHHHHHHHcchHHHHHHHHHhCCCCc
Confidence 467889999988542 2 235888899999999999999999876
No 51
>1p2x_A RNG2 protein, RAS GTPase-activating-like protein; helices, bundle, protein binding; 2.21A {Schizosaccharomyces pombe} SCOP: a.40.1.1
Probab=77.45 E-value=1.2 Score=32.80 Aligned_cols=43 Identities=19% Similarity=0.482 Sum_probs=34.6
Q ss_pred HHHHHHHHHHhhCCCCCee-ecCCCcccccchhhhhhhhccCCCcc
Q psy4515 63 TKALEMWCRRVTEGYPGVR-VDNMTSSWRDGLAFCALIHHFRPDLI 107 (149)
Q Consensus 63 k~~LL~W~q~~~~~y~~v~-v~nf~~sw~dG~a~~Alih~~rP~li 107 (149)
.+.+..|....+.. .+. -.+|....+||..+|-|+.+..|+.+
T Consensus 13 ~~e~~~WIe~~l~~--~l~~~~~l~~~LkdGvvLCkL~N~l~P~~i 56 (159)
T 1p2x_A 13 VDEAKKWIEECLGT--DLGPTSTFEQSLRNGVVLALLVQKFQPDKL 56 (159)
T ss_dssp HHHHHHHHHHHHTS--CCCCGGGHHHHTTTSHHHHHHHHHHCTTSC
T ss_pred HHHHHHHHHHHhCC--CCCChHHHHHHHcchHHHHHHHHHhCCCCc
Confidence 36688999999864 222 24788899999999999999999876
No 52
>1wym_A Transgelin-2; CH domain, F-actin binding, all helix, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens}
Probab=77.25 E-value=0.71 Score=33.97 Aligned_cols=44 Identities=23% Similarity=0.404 Sum_probs=35.3
Q ss_pred HHHHHHHHHHhhCCCCCeee-----cCCCcccccchhhhhhhhccCC---CccC
Q psy4515 63 TKALEMWCRRVTEGYPGVRV-----DNMTSSWRDGLAFCALIHHFRP---DLIF 108 (149)
Q Consensus 63 k~~LL~W~q~~~~~y~~v~v-----~nf~~sw~dG~a~~Alih~~rP---~lid 108 (149)
.+.+..|....+... +.. .+|....+||..+|-|+....| +.|+
T Consensus 19 e~e~~~WIe~~l~~~--l~~~~~~~~~~~~~LkDGvvLCkL~N~l~P~~~~~i~ 70 (155)
T 1wym_A 19 EQILIQWITTQCRKD--VGRPQPGRENFQNWLKDGTVLCELINALYPEGQAPVK 70 (155)
T ss_dssp HHHHHHHHHHHSSSC--CCCCCSSHHHHHHHHHTSHHHHHHHHHHSCTTTCSCC
T ss_pred HHHHHHHHHHHhCCC--CCCCcccHHHHHHHHcchHHHHHHHHHhccccCCCcC
Confidence 467999999998642 332 4788889999999999999999 6664
No 53
>2l3g_A RHO guanine nucleotide exchange factor 7; structural genomics, northeast structural genomics consortiu PSI-biology, calponin-homology domain; NMR {Homo sapiens}
Probab=76.82 E-value=0.82 Score=32.62 Aligned_cols=47 Identities=19% Similarity=0.412 Sum_probs=35.1
Q ss_pred hHHHHHHHHHHhhC-CCCC---eeecCC-CcccccchhhhhhhhccCCCccC
Q psy4515 62 GTKALEMWCRRVTE-GYPG---VRVDNM-TSSWRDGLAFCALIHHFRPDLIF 108 (149)
Q Consensus 62 ~k~~LL~W~q~~~~-~y~~---v~v~nf-~~sw~dG~a~~Alih~~rP~lid 108 (149)
.++.+..|..+.+. ..++ ..-.+| ....+||..+|-|+...+|+.++
T Consensus 13 ~~~e~~~WI~~~~~L~~~~~~~~~~~~~l~~~LkdGvvLCkLiN~l~Pg~i~ 64 (126)
T 2l3g_A 13 SAEQTVTWLITLGVLESPKKTISDPEGFLQASLKDGVVLCRLLERLLPGTIE 64 (126)
T ss_dssp HHHHHHHHHHHTTSSCCCSSCCSCHHHHHHHHHTTSHHHHHHHHHHSTTCCS
T ss_pred HHHHHHHHHHHHhCccccCCCCCChhhHHHHHHccHHHHHHHHHHhCCCCCC
Confidence 46789999998853 2211 123355 57889999999999999998885
No 54
>4abo_I MAL3, microtubule integrity protein MAL3; structural protein, cytoskeleton, GTPase, END binding; HET: GTP GSP; 8.60A {Schizosaccharomyces pombe}
Probab=76.40 E-value=2 Score=31.71 Aligned_cols=75 Identities=17% Similarity=0.267 Sum_probs=46.8
Q ss_pred hHHHHHHHHHHhhC-CCCCeeecCCCcccccchhhhhhhhccCCCccCccch--------------------hccccCCC
Q psy4515 62 GTKALEMWCRRVTE-GYPGVRVDNMTSSWRDGLAFCALIHHFRPDLIFYYAT--------------------FFVTEGYP 120 (149)
Q Consensus 62 ~k~~LL~W~q~~~~-~y~~v~v~nf~~sw~dG~a~~Alih~~rP~lid~~~~--------------------~~vteg~p 120 (149)
++..||.|+++.+. .|.. |. +-.+|-|+|-|++...+ .|++..+ |.......
T Consensus 7 SR~eLL~WiN~~L~~n~tk--IE----~l~sGAaYCQlmD~lfg-~i~l~kVkf~a~~e~e~i~NfKlLQ~~F~k~~I~k 79 (145)
T 4abo_I 7 SRQELLAWINQVTSLGLTR--IE----DCGKGYAMIQIFDSIYQ-DIPLKKVNFECNNEYQYINNWKVLQQVFLKKGIDK 79 (145)
T ss_dssp CHHHHHHHHHHHHTCCCCS--GG----GGGGSHHHHHHHHHHHC-CSCTTTSCSSCCSHHHHHHHHHHHHHHHHHHTCCC
T ss_pred cHHHHHHHHHHHcCCCcch--HH----HccccHHHHHHHHHHhc-CcchhhcccCCCCHHHHHHHHHHHHHHHHHcCCCC
Confidence 46779999999884 3433 22 45679999999998764 4665542 22223345
Q ss_pred ccccCCCCCc-chhhhHHHHHHhh
Q psy4515 121 GVRVDNMTSS-WRDGLAFCALIHH 143 (149)
Q Consensus 121 ~V~v~nfs~s-w~dgla~~ali~~ 143 (149)
.+.|+.+..+ ..|-+-|+--++.
T Consensus 80 ~ipV~kLvKgk~QDNlEFlQWfkk 103 (145)
T 4abo_I 80 VVDPERLSRCKMQDNLEFVQWAKR 103 (145)
T ss_dssp CCCHHHHTTTCHHHHHHHHHHHHH
T ss_pred ccCHHHHhccchHhHHHHHHHHHH
Confidence 5666665543 4566666655544
No 55
>2qjx_A Protein BIM1; calponin homology domain, protein binding; 1.90A {Saccharomyces cerevisiae}
Probab=74.90 E-value=2.6 Score=30.27 Aligned_cols=76 Identities=18% Similarity=0.363 Sum_probs=47.3
Q ss_pred chHHHHHHHHHHhhC-CCCCeeecCCCcccccchhhhhhhhccCCCccCccch--------------------hccccCC
Q psy4515 61 RGTKALEMWCRRVTE-GYPGVRVDNMTSSWRDGLAFCALIHHFRPDLIFYYAT--------------------FFVTEGY 119 (149)
Q Consensus 61 ~~k~~LL~W~q~~~~-~y~~v~v~nf~~sw~dG~a~~Alih~~rP~lid~~~~--------------------~~vteg~ 119 (149)
.++..||.|++...+ .|.. |..+ .+|-|.|-+++...|+ +++..+ +......
T Consensus 10 ~sR~elL~WiN~~L~~n~~k--iEel----~tGaayCQl~d~l~g~-v~l~kVkf~a~~e~e~~~N~k~LQ~~f~k~~I~ 82 (127)
T 2qjx_A 10 ESRTELLTWLNGLLNLNYKK--IEEC----GTGAAYCQIMDSIYGD-LPMNRVKFNATAEYEFQTNYKILQSCFSRHGIE 82 (127)
T ss_dssp -CHHHHHHHHHHHHTCCCCS--GGGG----GGSHHHHHHHHHHHCC-SCGGGSCTTCCSHHHHHHHHHHHHHHHHHTTCC
T ss_pred cCHHHHHHHHHHHHcCCccH--HHHc----cchHHHHHHHhhhccc-cCccccCCCCCCHHHHHHHHHHHHHHHHHcCCC
Confidence 467889999999875 4444 3333 6799999999987765 665542 1222223
Q ss_pred CccccCCCCCc-chhhhHHHHHHhh
Q psy4515 120 PGVRVDNMTSS-WRDGLAFCALIHH 143 (149)
Q Consensus 120 p~V~v~nfs~s-w~dgla~~ali~~ 143 (149)
..+.|+.+..+ ..|-+-|+--+..
T Consensus 83 k~ipV~kLvKgrfQDNlEFlQWfkk 107 (127)
T 2qjx_A 83 KTVYVDKLIRCKFQDNLEFLQWLKK 107 (127)
T ss_dssp CCCCHHHHTTTCHHHHHHHHHHHHH
T ss_pred CccCHHHHhccCchhHHHHHHHHHH
Confidence 45666666654 4566666555544
No 56
>2rr8_A Iqgap1 protein; F-actin binding protein, protein binding; NMR {Homo sapiens}
Probab=72.27 E-value=1.3 Score=33.74 Aligned_cols=44 Identities=14% Similarity=0.348 Sum_probs=35.6
Q ss_pred HHHHHHHHHHhhCCCCCee-ecCCCcccccchhhhhhhhccCCCccC
Q psy4515 63 TKALEMWCRRVTEGYPGVR-VDNMTSSWRDGLAFCALIHHFRPDLIF 108 (149)
Q Consensus 63 k~~LL~W~q~~~~~y~~v~-v~nf~~sw~dG~a~~Alih~~rP~lid 108 (149)
.+.+..|....+.. .+. ..+|....+||..+|-|+++.+|+.++
T Consensus 27 ~~e~~~WIe~~lg~--~lp~~~~f~~~LrDGvvLCkL~N~l~P~sv~ 71 (190)
T 2rr8_A 27 LEEAKRWMEACLGE--DLPPTTELEEGLRNGVYLAKLGNFFSPKVVS 71 (190)
T ss_dssp HHHHHHHHHHHSCC--CCCCHHHHHHHHSSHHHHHHHHHHSCTTTSC
T ss_pred HHHHHHHHHHHhCC--CCCChhHHHHHHcchhhHHHHHHHhCCCCcc
Confidence 36789999998854 222 357888999999999999999999875
No 57
>1wyr_A RHO guanine nucleotide exchange factor 6; CH domain, all-alpha, NPPSFA, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens}
Probab=70.08 E-value=2.1 Score=30.18 Aligned_cols=47 Identities=21% Similarity=0.521 Sum_probs=33.8
Q ss_pred hHHHHHHHHHHhhC-CCCCeee---cC-CCcccccchhhhhhhhccCCCccC
Q psy4515 62 GTKALEMWCRRVTE-GYPGVRV---DN-MTSSWRDGLAFCALIHHFRPDLIF 108 (149)
Q Consensus 62 ~k~~LL~W~q~~~~-~y~~v~v---~n-f~~sw~dG~a~~Alih~~rP~lid 108 (149)
..+.+..|...... ..++..+ .+ |....+||..+|-|+.+.+|+.++
T Consensus 7 ~e~e~~~WI~~~~~l~~~~~~~~~~~~~l~~~L~dGvvLCkL~N~l~Pg~i~ 58 (121)
T 1wyr_A 7 GEEQIVTWLISLGVLESPKKTICDPEEFLKSSLKNGVVLCKLINRLMPGSVE 58 (121)
T ss_dssp SHHHHHHHHHHHTSSCCCSSCCSCHHHHHHHHHHHSHHHHHHHHHHSTTCCS
T ss_pred HHHHHHHHHHHhcCcCCcccCCCCcHHHHHHHHccHHHHHHHHHHhCCCCCC
Confidence 35678999998853 2222111 23 467889999999999999998875
No 58
>2vzc_A Alpha-parvin; membrane, cytoplasm, cytoskeleton, cell junction, alternative splicing, calponin homology domain, actin-binding, cell membrane; 1.05A {Homo sapiens} PDB: 2vzd_A* 2vzg_B* 2vzi_B* 2k2r_A 3kmu_B 3kmw_B* 3rep_B*
Probab=51.87 E-value=2.4 Score=30.24 Aligned_cols=36 Identities=8% Similarity=-0.116 Sum_probs=25.0
Q ss_pred chhhhhhhccCCCcccccccccccccccccee--eehhhc
Q psy4515 7 TKALEMWCRRAPDPCFDTLNFDMGERRGTKAL--EMWCQC 44 (149)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~w~~~ 44 (149)
+.||+++...+.+.+-+..+ ++.+++.+++ ++|+++
T Consensus 87 ~~aL~~lk~~gi~l~~I~~~--DIvdGn~kliLgLiW~li 124 (131)
T 2vzc_A 87 SFAFELMQDGGLEKPKPRPE--DIVNCDLKSTLRVLYNLF 124 (131)
T ss_dssp HHHHHHHHHTTCCCCSSCHH--HHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCcCCCCHH--HhhCCCHHhHHHHHHHHH
Confidence 56888888888777766554 3777777555 667644
No 59
>2ee7_A Sperm flagellar protein 1; all alpha protein, CH domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=51.33 E-value=3.8 Score=29.35 Aligned_cols=27 Identities=19% Similarity=0.520 Sum_probs=23.8
Q ss_pred ccCCCCCcchhhhHHHHHHhhhCCCCC
Q psy4515 123 RVDNMTSSWRDGLAFCALIHHFRPDLM 149 (149)
Q Consensus 123 ~v~nfs~sw~dgla~~ali~~~rP~Li 149 (149)
.+.|+..++.||+.+..++++|+|.+|
T Consensus 32 ~~rn~rRDFSdG~lvAEIl~~y~Pk~V 58 (127)
T 2ee7_A 32 PKRNLSRDFSDGVLVAEVIKFYFPKMV 58 (127)
T ss_dssp CSSCHHHHHTTSHHHHHHHHHHCTTTC
T ss_pred CCCchhhhccchhHHHHHHHHHCcCcc
Confidence 567777899999999999999999875
No 60
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=39.23 E-value=5.2 Score=34.76 Aligned_cols=47 Identities=21% Similarity=0.473 Sum_probs=34.3
Q ss_pred HHHHHHHHHhhCC-------CCCeeecCCCcccccchhhhhhhhccCCCccCcc
Q psy4515 64 KALEMWCRRVTEG-------YPGVRVDNMTSSWRDGLAFCALIHHFRPDLIFYY 110 (149)
Q Consensus 64 ~~LL~W~q~~~~~-------y~~v~v~nf~~sw~dG~a~~Alih~~rP~lid~~ 110 (149)
...-.|..+...- .|...+.+|....+||..+|.|+++.+|+.+++.
T Consensus 8 ~~~~~Wl~~~~~l~~~~~~~~~~~~~~~l~~~L~~G~~Lc~l~n~l~p~~v~~~ 61 (587)
T 3ky9_A 8 RQCTHWLIQCRVLPPSHRVTWEGAQVCELAQALRDGVLLCQLLNNLLPHAINLR 61 (587)
T ss_dssp HHHHHHHHHTTCSCTTSTTTSTTCCHHHHHHHHSSTHHHHHHHHHHSTTSSCGG
T ss_pred HHHHHHHHHhCCCCCcccccCCCCChhhHHHHhCcHHHHHHHHHHhCCCCCCcc
Confidence 3456787753211 1344578888999999999999999999988543
No 61
>1wyp_A Calponin 1; CH domain, F-actin binding, all-alpha, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens}
Probab=30.69 E-value=21 Score=25.26 Aligned_cols=26 Identities=23% Similarity=0.666 Sum_probs=22.8
Q ss_pred cCCCCCcchhhhHHHHHHhhhCCCCC
Q psy4515 124 VDNMTSSWRDGLAFCALIHHFRPDLM 149 (149)
Q Consensus 124 v~nfs~sw~dgla~~ali~~~rP~Li 149 (149)
..+|..+-+||..+|.++.+..|+.|
T Consensus 35 ~~~l~~~L~DGvvLCkL~N~l~P~~v 60 (136)
T 1wyp_A 35 GNNFMDGLKDGIILCEFINKLQPGSV 60 (136)
T ss_dssp CSCTTHHHHTSHHHHHHHHHHSTTSS
T ss_pred cHHHHHHHccHHhHHHHHHhhCCCCc
Confidence 36888889999999999999999864
No 62
>1wix_A HOOK homolog 1, RSGI RUH-026; structural genomics, mouse cDNA, riken structural genomics/proteomics initiative, unknown function; NMR {Mus musculus} SCOP: a.40.3.1
Probab=29.77 E-value=22 Score=26.13 Aligned_cols=45 Identities=9% Similarity=0.256 Sum_probs=31.2
Q ss_pred cchHHHHHHHHHHhhCCCCCeeecCCCcccccchhhhhhhhccCCCccC
Q psy4515 60 RRGTKALEMWCRRVTEGYPGVRVDNMTSSWRDGLAFCALIHHFRPDLIF 108 (149)
Q Consensus 60 ~~~k~~LL~W~q~~~~~y~~v~v~nf~~sw~dG~a~~Alih~~rP~lid 108 (149)
..-..+|+.|++.-.... .++++ .+..||.++.-++|...|+-++
T Consensus 8 ~~~~~aLl~W~~tf~~~~---~~~~~-~dL~DG~~L~~iL~~IDp~~F~ 52 (164)
T 1wix_A 8 LPLCDSLIIWLQTFKTAS---PCQDV-KQLTNGVTMAQVLHQIDVAWFS 52 (164)
T ss_dssp CHHHHHHHHHHTTCCCSS---CCCSH-HHHTTSHHHHHHHHHHCTTTSC
T ss_pred hHHHHHHHHHHHHcCCCC---CcCcH-HHhccHHHHHHHHHHhCccccC
Confidence 334689999996533221 22222 2578999999999999999775
No 63
>2rqw_B 24-meric peptide from serine/threonine-protein KI STE20; BEM1P, STE20P, SH3CI, PRR, cytoplasm, cytoskeleton, SH3 DOMA cycle; NMR {Saccharomyces cerevisiae}
Probab=20.72 E-value=30 Score=18.01 Aligned_cols=8 Identities=50% Similarity=0.787 Sum_probs=6.7
Q ss_pred hccCCCcc
Q psy4515 14 CRRAPDPC 21 (149)
Q Consensus 14 ~~~~~~~~ 21 (149)
+|+||||-
T Consensus 11 sRPAPKPP 18 (26)
T 2rqw_B 11 SRPAPKPP 18 (26)
T ss_dssp SSCCCCCS
T ss_pred CCCCCCCC
Confidence 68999986
No 64
>1wyn_A Calponin-2; CH domain, F-actin binding, all alpha helix, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens}
Probab=20.68 E-value=23 Score=25.48 Aligned_cols=25 Identities=20% Similarity=0.639 Sum_probs=21.8
Q ss_pred CCCCCcchhhhHHHHHHhhhCCCCC
Q psy4515 125 DNMTSSWRDGLAFCALIHHFRPDLM 149 (149)
Q Consensus 125 ~nfs~sw~dgla~~ali~~~rP~Li 149 (149)
.+|..+-+||..+|.++.+..|+.|
T Consensus 36 ~~l~~~L~DGvvLCkL~N~l~P~~v 60 (146)
T 1wyn_A 36 PDFQKGLKDGTILCTLMNKLQPGSV 60 (146)
T ss_dssp SCHHHHHHTTSHHHHHHHHHCTTSC
T ss_pred HHHHHHHccHHHHHHHHHHhCCCCc
Confidence 5677778999999999999999865
Done!