RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy4519
         (236 letters)



>d1iray1 b.1.1.4 (Y:1-101) Type-1 interleukin-1 receptor {Human
           (Homo sapiens) [TaxId: 9606]}
          Length = 101

 Score = 28.4 bits (62), Expect = 0.31
 Identities = 10/99 (10%), Positives = 25/99 (25%), Gaps = 7/99 (7%)

Query: 85  CKKKKIPSLTYPEIAETAL-------SEGPPSVRWLAPYGRYWDALSHMIKGALGTGILT 137
           CK+++   +      E  +       +E   ++ W     +   +     +       L 
Sbjct: 3   CKEREEKIILVSSANEIDVRPCPLNPNEHKGTITWYKDDSKTPVSTEQASRIHQHKEKLW 62

Query: 138 MPHAFKDSGYLLGFLGTVAIGAFTTSCIQILVRAQYELC 176
              A  +       +   +            V  +  LC
Sbjct: 63  FVPAKVEDSGHYYCVVRNSSYCLRIKISAKFVENEPNLC 101


>d1p49a_ c.76.1.2 (A:) Steryl-sulfatase {Human (Homo sapiens)
           [TaxId: 9606]}
          Length = 553

 Score = 26.3 bits (56), Expect = 3.4
 Identities = 12/41 (29%), Positives = 16/41 (39%)

Query: 113 LAPYGRYWDALSHMIKGALGTGILTMPHAFKDSGYLLGFLG 153
           +A + R    L     G L T  +T     KD GY    +G
Sbjct: 71  MASWSRTGVFLFTASSGGLPTDEITFAKLLKDQGYSTALIG 111


>d1h6va3 d.87.1.1 (A:367-499) Mammalian thioredoxin reductase {Rat
           (Rattus norvegicus) [TaxId: 10116]}
          Length = 133

 Score = 25.5 bits (55), Expect = 3.8
 Identities = 8/84 (9%), Positives = 22/84 (26%), Gaps = 4/84 (4%)

Query: 90  IPSLTY--PEIAETALSEGPPSVRWLAPYGRYWDALSHMIKGALGTGI--LTMPHAFKDS 145
           +P+  +   E     LSE     ++       + +    ++  + +            + 
Sbjct: 4   VPTTVFTPLEYGCCGLSEEKAVEKFGEENIEVYHSFFWPLEWTVPSRDNNKCYAKVICNL 63

Query: 146 GYLLGFLGTVAIGAFTTSCIQILV 169
                 +G   +G       Q   
Sbjct: 64  KDNERVVGFHVLGPNAGEVTQGFA 87


>d1qmga1 a.100.1.2 (A:308-595) Class II ketol-acid reductoisomerase
           {Spinach (Spinacia oleracea) [TaxId: 3562]}
          Length = 288

 Score = 25.9 bits (57), Expect = 4.2
 Identities = 10/35 (28%), Positives = 15/35 (42%), Gaps = 1/35 (2%)

Query: 157 IGAFTTSCIQILVRAQYELCRRKRI-PSLTYPEIL 190
           +  FT      L+ AQ E+ R+K    S    E +
Sbjct: 153 LYPFTAGVYVALMMAQIEILRKKGHSYSEIINESV 187


>d1re9a_ a.104.1.1 (A:) Cytochrome P450-CAM {Pseudomonas putida
           [TaxId: 303]}
          Length = 404

 Score = 25.1 bits (53), Expect = 8.7
 Identities = 6/31 (19%), Positives = 8/31 (25%), Gaps = 1/31 (3%)

Query: 95  YPEIAETALSEGPPSVRWLAPYGRYWDALSH 125
               A        P + W    G +W A   
Sbjct: 29  QEAWAV-LQESNVPDLVWTRCNGGHWIATRG 58


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.327    0.142    0.439 

Gapped
Lambda     K      H
   0.267   0.0479    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 899,850
Number of extensions: 41108
Number of successful extensions: 86
Number of sequences better than 10.0: 1
Number of HSP's gapped: 86
Number of HSP's successfully gapped: 7
Length of query: 236
Length of database: 2,407,596
Length adjustment: 83
Effective length of query: 153
Effective length of database: 1,268,006
Effective search space: 194004918
Effective search space used: 194004918
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 51 (24.0 bits)