RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy4520
(291 letters)
>d1wk1a_ d.169.1.1 (A:) Hypothetical protein F28B4.3 {Caenorhabditis
elegans [TaxId: 6239]}
Length = 150
Score = 38.5 bits (88), Expect = 3e-04
Identities = 13/49 (26%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
Query: 235 GSTATYNGKCYIFYNRRPMNLRDSLAFCRSRGGSLVDESNPALQGFISW 283
GS+ + K N +++ + FC S GG L D+ F S
Sbjct: 1 GSSGSSGVKFLTV-NDDILSMPQARNFCASAGGYLADDLGDDKNNFYSS 48
>d1xpha1 d.169.1.1 (A:265-394) DC-SIGNR (DC-SIGN related receptor)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 130
Score = 37.8 bits (86), Expect = 3e-04
Identities = 15/54 (27%), Positives = 20/54 (37%), Gaps = 2/54 (3%)
Query: 233 PPGSTATYNGKCYIFYNRRPMNLRDSLAFCRSRGGSLVDESNPALQGFISWELS 286
P T + G CY N N DS+ C+ LV Q F+ + S
Sbjct: 5 PKDWTF-FQGNCYFMSN-SQRNWHDSVTACQEVRAQLVVIKTAEEQNFLQLQTS 56
>d1egga_ d.169.1.1 (A:) Macrophage mannose receptor, CRD4 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 136
Score = 37.9 bits (86), Expect = 3e-04
Identities = 14/55 (25%), Positives = 19/55 (34%), Gaps = 4/55 (7%)
Query: 233 PPGSTAT-YNGKCYIFY---NRRPMNLRDSLAFCRSRGGSLVDESNPALQGFISW 283
P A+ C+ Y +S FCR+ GG L +N Q I
Sbjct: 2 PEDWGASSRTSLCFKLYAKGKHEKKTWFESRDFCRALGGDLASINNKEEQQTIWR 56
>d1e87a_ d.169.1.1 (A:) CD69 {Human (Homo sapiens) [TaxId: 9606]}
Length = 117
Score = 37.2 bits (85), Expect = 5e-04
Identities = 8/53 (15%), Positives = 14/53 (26%), Gaps = 2/53 (3%)
Query: 233 PPGSTATYNGKCYIFYNRRPMNLRDSLAFCRSRGGSLVDESNPALQGFISWEL 285
Y KCY + + + C G +L + F+
Sbjct: 4 SEDWVG-YQRKCYFISTVK-RSWTSAQNACSEHGATLAVIDSEKDMNFLKRYA 54
>d1tdqb_ d.169.1.1 (B:) Aggrecan core protein {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 126
Score = 36.6 bits (83), Expect = 8e-04
Identities = 12/54 (22%), Positives = 18/54 (33%), Gaps = 2/54 (3%)
Query: 233 PPGSTATYNGKCYIFYNRRPMNLRDSLAFCRSRGGSLVDESNPALQGFISWELS 286
G T + G CY + D+ CR + L P Q F++
Sbjct: 4 EEGWTK-FQGHCYRHFP-DRETWVDAERRCREQQSHLSSIVTPEEQEFVNKNAQ 55
>d1kg0c_ d.169.1.1 (C:) EBV gp42 {Epstein-Barr virus [TaxId: 10376]}
Length = 136
Score = 36.7 bits (84), Expect = 8e-04
Identities = 8/55 (14%), Positives = 17/55 (30%), Gaps = 2/55 (3%)
Query: 234 PGSTATYNGKCYIFYNRRPMNLRDSLAFCRSRGG-SLVDESNPALQGFISWELSG 287
T +Y G C+ F + C + + P + ++ L+
Sbjct: 20 REYTFSYKGCCFYFTK-KKHTWNGCFQACAEKYPCTYFYGPTPDILPVVTRNLNA 73
>d1hupa1 d.169.1.1 (A:112-228) Mannose-binding protein A, C-lectin
domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 117
Score = 35.4 bits (80), Expect = 0.002
Identities = 10/42 (23%), Positives = 12/42 (28%)
Query: 242 GKCYIFYNRRPMNLRDSLAFCRSRGGSLVDESNPALQGFISW 283
G + N M A C S+ N A G I
Sbjct: 4 GNKFFLTNGEIMTFEKVKALCVKFQASVATPRNAAENGAIQN 45
>d1ypqa1 d.169.1.1 (A:140-270) Oxidised low density lipoprotein
{Human (Homo sapiens) [TaxId: 9606]}
Length = 131
Score = 35.7 bits (81), Expect = 0.002
Identities = 9/38 (23%), Positives = 13/38 (34%), Gaps = 2/38 (5%)
Query: 233 PPGSTATYNGKCYIFYNRRPMNLRDSLAFCRSRGGSLV 270
P + CY+F + N S C S L+
Sbjct: 6 PQDWI-WHGENCYLFSS-GSFNWEKSQEKCLSLDAKLL 41
>d1rdl1_ d.169.1.1 (1:) Mannose-binding protein A, C-lectin domain
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 111
Score = 35.1 bits (79), Expect = 0.002
Identities = 10/41 (24%), Positives = 15/41 (36%), Gaps = 1/41 (2%)
Query: 243 KCYIFYNRRPMNLRDSLAFCRSRGGSLVDESNPALQGFISW 283
K ++ RR M L + A C G++ N I
Sbjct: 1 KYFMSSVRR-MPLNRAKALCSELQGTVATPRNAEENRAIQN 40
>d1qo3c_ d.169.1.1 (C:) NK cell receptor {Mouse (Mus musculus),
ly49-a [TaxId: 10090]}
Length = 133
Score = 35.2 bits (80), Expect = 0.002
Identities = 10/31 (32%), Positives = 12/31 (38%), Gaps = 1/31 (3%)
Query: 240 YNGKCYIFYNRRPMNLRDSLAFCRSRGGSLV 270
Y KCY F R C+S SL+
Sbjct: 21 YGMKCYYFVMDR-KTWSGCKQTCQSSSLSLL 50
>d1dv8a_ d.169.1.1 (A:) H1 subunit of the asialoglycoprotein
receptor {Human (Homo sapiens) [TaxId: 9606]}
Length = 128
Score = 34.4 bits (77), Expect = 0.005
Identities = 11/51 (21%), Positives = 17/51 (33%), Gaps = 2/51 (3%)
Query: 233 PPGSTATYNGKCYIFYNRRPMNLRDSLAFCRSRGGSLVDESNPALQGFISW 283
P + CY F D+ +CR LV ++ Q F+
Sbjct: 2 PVNWVE-HERSCYWFSR-SGKAWADADNYCRLEDAHLVVVTSWEEQKFVQH 50
>d3c8ja1 d.169.1.1 (A:138-259) NK cell receptor {Mouse (Mus
musculus), ly49-c [TaxId: 10090]}
Length = 122
Score = 34.1 bits (77), Expect = 0.005
Identities = 8/31 (25%), Positives = 13/31 (41%), Gaps = 1/31 (3%)
Query: 240 YNGKCYIFYNRRPMNLRDSLAFCRSRGGSLV 270
Y+ KCY F + A C+ G ++
Sbjct: 9 YSTKCYYFIMNK-TTWSGCKANCQHYGVPIL 38
>d2msba_ d.169.1.1 (A:) Mannose-binding protein A, C-lectin domain
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 112
Score = 33.8 bits (76), Expect = 0.006
Identities = 8/41 (19%), Positives = 12/41 (29%), Gaps = 1/41 (2%)
Query: 243 KCYIFYNRRPMNLRDSLAFCRSRGGSLVDESNPALQGFISW 283
K ++ N M A C G++ N I
Sbjct: 2 KFFVT-NHERMPFSKVKALCSELRGTVAIPRNAEENKAIQE 41
>d1r13a1 d.169.1.1 (A:110-228) Surfactant protein, lectin domain
{Rat (Rattus norvegicus), SP-A [TaxId: 10116]}
Length = 119
Score = 33.5 bits (75), Expect = 0.008
Identities = 9/48 (18%), Positives = 16/48 (33%), Gaps = 1/48 (2%)
Query: 236 STATYNGKCYIFYNRRPMNLRDSLAFCRSRGGSLVDESNPALQGFISW 283
S + K + N + +N C GG++ P I+
Sbjct: 1 SMLSVGDKVFST-NGQSVNFDTIKEMCTRAGGNIAVPRTPEENEAIAS 47
>d1jwia_ d.169.1.1 (A:) Snake coagglutinin alpha chain {Puff adder
(Bitis arietans), bitiscetin [TaxId: 8692]}
Length = 124
Score = 33.5 bits (75), Expect = 0.008
Identities = 12/54 (22%), Positives = 20/54 (37%), Gaps = 2/54 (3%)
Query: 233 PPGSTATYNGKCYIFYNRRPMNLRDSLAFCRSRGGSLVDESNPALQGFISWELS 286
P ++ Y G CY + + D+ FC G L + F++ S
Sbjct: 2 LPDWSS-YKGHCYKVFK-KVGTWEDAEKFCVENSGHLASIDSKEEADFVTKLAS 53
>d3bdwa1 d.169.1.1 (A:59-179) CD94 {Human (Homo sapiens) [TaxId:
9606]}
Length = 121
Score = 33.4 bits (75), Expect = 0.008
Identities = 11/51 (21%), Positives = 16/51 (31%), Gaps = 2/51 (3%)
Query: 233 PPGSTATYNGKCYIFYNRRPMNLRDSLAFCRSRGGSLVDESNPALQGFISW 283
Y CY + +S C S+ SL+ N F+S
Sbjct: 4 QEKWV-GYRCNCYFISS-EQKTWNESRHLCASQKSSLLQLQNTDELDFMSS 52
>d1t8da1 d.169.1.1 (A:1-143) Low affinity immunoglobulin epsilon Fc
receptor {Human (Homo sapiens) [TaxId: 9606]}
Length = 143
Score = 33.8 bits (76), Expect = 0.009
Identities = 12/51 (23%), Positives = 17/51 (33%), Gaps = 2/51 (3%)
Query: 233 PPGSTATYNGKCYIFYNRRPMNLRDSLAFCRSRGGSLVDESNPALQGFISW 283
P + KCY F + C G LV +P Q F++
Sbjct: 9 PEKWIN-FQRKCYYFGK-GTKQWVHARYACDDMEGQLVSIHSPEEQDFLTK 57
>d1hq8a_ d.169.1.1 (A:) NK cell-activating receptor nkg2d {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 123
Score = 33.0 bits (74), Expect = 0.013
Identities = 13/51 (25%), Positives = 19/51 (37%), Gaps = 2/51 (3%)
Query: 233 PPGSTATYNGKCYIFYNRRPMNLRDSLAFCRSRGGSLVDESNPALQGFISW 283
P + CY F+N S A C S+ SL+ + Q F+
Sbjct: 7 PNNWI-CHRNNCYQFFN-EEKTWNQSQASCLSQNSSLLKIYSKEEQDFLKL 55
>d1g1ta1 d.169.1.1 (A:1-118) E-selectin, C-lectin domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 118
Score = 31.2 bits (69), Expect = 0.042
Identities = 8/38 (21%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Query: 244 CYIFYNRRPMNLRDSLAFCRSRGGSLVDESNPALQGFI 281
Y + M ++ A+C+ R LV N ++
Sbjct: 2 SY-NTSTEAMTYDEASAYCQQRYTHLVAIQNKEEIEYL 38
>d1byfa_ d.169.1.1 (A:) Lectin TC14 {Tunicate (Polyandrocarpa
misakiensis) [TaxId: 7723]}
Length = 123
Score = 30.2 bits (66), Expect = 0.13
Identities = 10/37 (27%), Positives = 17/37 (45%)
Query: 245 YIFYNRRPMNLRDSLAFCRSRGGSLVDESNPALQGFI 281
I ++ MN D+ +C+SRG +LV +
Sbjct: 3 EILFSDETMNYADAGTYCQSRGMALVSSAMRDSTMVK 39
>d1umrc_ d.169.1.1 (C:) Snake coagglutinin beta chain {South
american rattlesnake (Crotalus durissus terrificus),
convulxin [TaxId: 8732]}
Length = 125
Score = 29.7 bits (65), Expect = 0.17
Identities = 12/56 (21%), Positives = 21/56 (37%), Gaps = 4/56 (7%)
Query: 233 PPGSTATYNGKCYIFYNRRPMNLRDSLAFCRSR--GGSLVDESNPALQGFISWELS 286
P ++ Y+ CY + + M D+ FC + G LV + F+
Sbjct: 5 PSHWSS-YDRYCYKVFK-QEMTWADAEKFCTQQHTGSHLVSFHSTEEVDFVVKMTH 58
>d1v7pa_ d.169.1.1 (A:) Snake coagglutinin alpha chain {Snake (Echis
multisquamatus), Ems16 [TaxId: 93050]}
Length = 134
Score = 29.7 bits (65), Expect = 0.20
Identities = 14/53 (26%), Positives = 24/53 (45%), Gaps = 4/53 (7%)
Query: 233 PPGSTATYNGKCYIFYNRRPMNLRDSLAFC--RSRGGSLVDESNPALQGFISW 283
P TA Y+ CY+ P N ++ FC +++ G LV + F++
Sbjct: 5 PSDWTA-YDQHCYLAIG-EPQNWYEAERFCTEQAKDGHLVSIQSREEGNFVAQ 55
>d1g1sa1 d.169.1.1 (A:1-118) P-selectin, C-lectin domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 118
Score = 29.3 bits (64), Expect = 0.24
Identities = 8/41 (19%), Positives = 17/41 (41%)
Query: 247 FYNRRPMNLRDSLAFCRSRGGSLVDESNPALQGFISWELSG 287
Y+ + + S +C++R LV N +++ L
Sbjct: 4 HYSTKAYSWNISRKYCQNRYTDLVAIQNKNEIDYLNKVLPY 44
>d1c3ab_ d.169.1.1 (B:) Snake coagglutinin beta chain {Habu snake
(Trimeresurus flavoviridis), flavocetin-A [TaxId:
88087]}
Length = 125
Score = 29.3 bits (64), Expect = 0.28
Identities = 10/31 (32%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Query: 233 PPGSTATYNGKCYIFYNRRPMNLRDSLAFCR 263
P G ++ Y+ CY + + MN D+ FC
Sbjct: 5 PLGWSS-YDEHCYQVFQ-QKMNWEDAEKFCT 33
>d2afpa_ d.169.1.1 (A:) Type II antifreeze protein {Sea raven
(Hemitripterus americanus) [TaxId: 8094]}
Length = 129
Score = 29.3 bits (64), Expect = 0.29
Identities = 7/35 (20%), Positives = 10/35 (28%), Gaps = 2/35 (5%)
Query: 233 PPGSTATYNGKCYIFYNRRPMNLRDSLAFCRSRGG 267
P G +C + M + C GG
Sbjct: 8 PAGWQP-LGDRCIYYET-TAMTWALAETNCMKLGG 40
>d1v7pb_ d.169.1.1 (B:) Snake coagglutinin beta chain {Snake (Echis
multisquamatus), Ems16 [TaxId: 93050]}
Length = 127
Score = 29.3 bits (64), Expect = 0.29
Identities = 6/34 (17%), Positives = 14/34 (41%), Gaps = 2/34 (5%)
Query: 233 PPGSTATYNGKCYIFYNRRPMNLRDSLAFCRSRG 266
P G ++ ++ CY + N ++ C +
Sbjct: 2 PLGWSS-FDQHCYKVFE-PVKNWTEAEEICMQQH 33
>d1gz2a_ d.169.1.1 (A:) Ovocleidin-17 {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 139
Score = 29.4 bits (64), Expect = 0.30
Identities = 12/56 (21%), Positives = 22/56 (39%), Gaps = 4/56 (7%)
Query: 233 PPGSTATYNGKCYIFYNRRPMNLRDSLAFC--RSRGGSLVDESNPALQGFISWELS 286
PG G C F++ R ++ + +FC G L + A ++ L+
Sbjct: 3 GPGWVP-TPGGCLGFFS-RELSWSRAESFCRRWGPGSHLAAVRSAAELRLLAELLN 56
>d1j34b_ d.169.1.1 (B:) Snake coagglutinin beta chain {Habu snake
(Trimeresurus flavoviridis) [TaxId: 88087]}
Length = 123
Score = 28.9 bits (63), Expect = 0.31
Identities = 15/56 (26%), Positives = 22/56 (39%), Gaps = 4/56 (7%)
Query: 233 PPGSTATYNGKCYIFYNRRPMNLRDSLAFCR--SRGGSLVDESNPALQGFISWELS 286
P ++ Y G CY ++ P N D+ FC GG LV + F+
Sbjct: 3 PSDWSS-YEGHCYKPFS-EPKNWADAENFCTQQHAGGHLVSFQSSEEADFVVKLAF 56
>d1tn3a_ d.169.1.1 (A:) Tetranectin {Human (Homo sapiens) [TaxId:
9606]}
Length = 137
Score = 28.9 bits (63), Expect = 0.34
Identities = 7/34 (20%), Positives = 15/34 (44%), Gaps = 3/34 (8%)
Query: 233 PPGSTATYNGKCYIFYNRRPMNLRDSLAFCRSRG 266
G+ + KC++ + + ++ C SRG
Sbjct: 7 LKGTK--VHMKCFLAFT-QTKTFHEASEDCISRG 37
>d1sb2b1 d.169.1.1 (B:2-128) Snake coagglutinin beta chain {Malayan
pit viper (Calloselasma rhodostoma), rhodocetin [TaxId:
8717]}
Length = 127
Score = 28.5 bits (62), Expect = 0.54
Identities = 11/56 (19%), Positives = 19/56 (33%), Gaps = 4/56 (7%)
Query: 233 PPGSTATYNGKCYIFYNRRPMNLRDSLAFCRSR--GGSLVDESNPALQGFISWELS 286
P +A CY + ++ FC + G LV + A F+ +
Sbjct: 4 PTTWSA-SKLYCYKPFK-EKKTWIEAERFCAKQAENGHLVSIGSAAEADFLDLVIV 57
>d1oz7b_ d.169.1.1 (B:) Snake coagglutinin beta chain {Saw-scaled
viper (Echis carinatus), echicetin [TaxId: 40353]}
Length = 123
Score = 28.1 bits (61), Expect = 0.57
Identities = 15/57 (26%), Positives = 21/57 (36%), Gaps = 4/57 (7%)
Query: 231 DQPPGSTATYNGKCYIFYNRRPMNLRDSLAFCR--SRGGSLVDESNPALQGFISWEL 285
+ P + Y G CY + MN D+ FC + G LV N F+
Sbjct: 1 NCLPDWSV-YEGYCYKVFK-ERMNWADAEKFCTKQHKDGHLVSFRNSKEVDFVISLA 55
>d1oz7a_ d.169.1.1 (A:) Snake coagglutinin alpha chain {Saw-scaled
viper (Echis carinatus), echicetin [TaxId: 40353]}
Length = 131
Score = 28.1 bits (61), Expect = 0.71
Identities = 11/53 (20%), Positives = 22/53 (41%), Gaps = 4/53 (7%)
Query: 233 PPGSTATYNGKCYIFYNRRPMNLRDSLAFCRSRG--GSLVDESNPALQGFISW 283
PPG ++ CY+ + P ++ FC +G G L+ + + +
Sbjct: 3 PPGWSS-NGVYCYMLFK-EPKTWDEAEKFCNKQGKDGHLLSIESKKEEILVDI 53
>d1sb2a1 d.169.1.1 (A:1-132) Snake coagglutinin alpha chain {Malayan
pit viper (Calloselasma rhodostoma), rhodocetin [TaxId:
8717]}
Length = 132
Score = 27.8 bits (60), Expect = 0.79
Identities = 10/57 (17%), Positives = 18/57 (31%), Gaps = 4/57 (7%)
Query: 233 PPGSTATYNGKCYIFYNRRPMNLRDSLAFCRSR--GGSLVDESNPALQGFISWELSG 287
P G ++ CY + ++ FC + LV N F+ +
Sbjct: 3 PDGWSS-TKSYCYRPFK-EKKTWEEAERFCTEQEKEAHLVSMENRLEAVFVDMVMEN 57
>d1jzna_ d.169.1.1 (A:) Galactose-specific C-type lectin {Western
diamondback rattlesnake (Crotalus atrox) [TaxId: 8730]}
Length = 135
Score = 27.8 bits (60), Expect = 0.80
Identities = 11/41 (26%), Positives = 14/41 (34%), Gaps = 2/41 (4%)
Query: 233 PPGSTATYNGKCYIFYNRRPMNLRDSLAFCRSRGGSLVDES 273
P NG CY +N + D+ FCR S
Sbjct: 4 PLDWLP-MNGLCYKIFN-QLKTWEDAEMFCRKYKPGCHLAS 42
>d1umra_ d.169.1.1 (A:) Snake coagglutinin alpha chain {South
american rattlesnake (Crotalus durissus terrificus),
convulxin [TaxId: 8732]}
Length = 135
Score = 27.8 bits (60), Expect = 0.91
Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 4/53 (7%)
Query: 233 PPGSTATYNGKCYIFYNRRPMNLRDSLAFC--RSRGGSLVDESNPALQGFISW 283
P Y+ CY +N MN D+ FC +++G LV + F++W
Sbjct: 5 PSDWYY-YDQHCYRIFN-EEMNWEDAEWFCTKQAKGAHLVSIKSAKEADFVAW 55
>d1jwib_ d.169.1.1 (B:) Snake coagglutinin beta chain {Puff adder
(Bitis arietans), bitiscetin [TaxId: 8692]}
Length = 123
Score = 27.3 bits (59), Expect = 1.1
Identities = 14/56 (25%), Positives = 22/56 (39%), Gaps = 4/56 (7%)
Query: 233 PPGSTATYNGKCYIFYNRRPMNLRDSLAFCRSR--GGSLVDESNPALQGFISWELS 286
P ++ Y G CY + D+ FC+ GG L+ ++ FIS
Sbjct: 3 LPDWSS-YKGHCYKVFK-VEKTWADAEKFCKELVNGGHLMSVNSREEGEFISKLAL 56
>d1j34a_ d.169.1.1 (A:) Snake coagglutinin alpha chain {Habu snake
(Trimeresurus flavoviridis) [TaxId: 88087]}
Length = 129
Score = 27.4 bits (59), Expect = 1.1
Identities = 14/53 (26%), Positives = 22/53 (41%), Gaps = 4/53 (7%)
Query: 233 PPGSTATYNGKCYIFYNRRPMNLRDSLAFCRSR--GGSLVDESNPALQGFISW 283
P G ++ Y G CY + D+ FC + GG LV + F++
Sbjct: 3 PSGWSS-YEGHCYKPFK-LYKTWDDAERFCTEQAKGGHLVSIESAGEADFVAQ 53
>d1c3aa_ d.169.1.1 (A:) Snake coagglutinin alpha chain {Habu snake
(Trimeresurus flavoviridis), flavocetin-A [TaxId:
88087]}
Length = 135
Score = 27.0 bits (58), Expect = 1.7
Identities = 14/53 (26%), Positives = 24/53 (45%), Gaps = 4/53 (7%)
Query: 233 PPGSTATYNGKCYIFYNRRPMNLRDSLAFCRSRG--GSLVDESNPALQGFISW 283
PG +A Y+ CY ++ +P N D+ +FC LV + F++
Sbjct: 5 IPGWSA-YDRYCYQAFS-KPKNWEDAESFCEEGVKTSHLVSIESSGEGDFVAQ 55
>d1wmza_ d.169.1.1 (A:) Lectin CEL-I {Cucumaria echinata [TaxId:
40245]}
Length = 140
Score = 26.8 bits (57), Expect = 2.0
Identities = 9/37 (24%), Positives = 12/37 (32%), Gaps = 2/37 (5%)
Query: 233 PPGSTATYNGKCYIFYNRRPMNLRDSLAFCRSRGGSL 269
P A CY F+N ++ C S S
Sbjct: 4 PTDWEA-EGDHCYRFFN-TLTTWENAHHECVSYSCST 38
>d1uv0a_ d.169.1.1 (A:) Pancreatitis-associated protein 1 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 140
Score = 26.6 bits (57), Expect = 2.3
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Query: 233 PPGSTATYNGKCYIFYNRRPMNLRDSLAFCRSRG-GSLVDESNPALQGFISWELS 286
P GS A Y CY + P + D+ C+ R G+LV + A F+S +
Sbjct: 6 PKGSKA-YGSHCYALFL-SPKSWTDADLACQKRPSGNLVSVLSGAEGSFVSSLVK 58
>d1qcxa_ b.80.1.2 (A:) Pectin lyase {Aspergillus niger, type B
[TaxId: 5061]}
Length = 359
Score = 27.0 bits (59), Expect = 2.5
Identities = 11/55 (20%), Positives = 18/55 (32%)
Query: 121 AMYVYDTGHVIIDNVQFMLGLSDSALDRFYMQDTIIQEFRAFASRSHCHVTLVIH 175
A+ V D+ V ID+V + + + + RS T H
Sbjct: 155 AITVDDSDLVWIDHVTTARIGRQHIVLGTSADNRVTISYSLIDGRSDYSATCNGH 209
>d1qdda_ d.169.1.1 (A:) Lithostathine, inhibitor of stone formation
{Human (Homo sapiens) [TaxId: 9606]}
Length = 144
Score = 25.9 bits (55), Expect = 4.3
Identities = 9/34 (26%), Positives = 14/34 (41%), Gaps = 2/34 (5%)
Query: 233 PPGSTATYNGKCYIFYNRRPMNLRDSLAFCRSRG 266
P G+ A Y CY F D+ +C++
Sbjct: 15 PEGTNA-YRSYCYYFNE-DRETWVDADLYCQNMN 46
>d1fvua_ d.169.1.1 (A:) Snake coagglutinin alpha chain {Jararaca
(Bothrops jararaca), botrocetin [TaxId: 8724]}
Length = 133
Score = 25.5 bits (54), Expect = 5.3
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Query: 233 PPGSTATYNGKCYIFYNRRPMNLRDSLAFCRSRG 266
P G ++ Y G CY F+ + MN D+ FC +
Sbjct: 3 PSGWSS-YEGNCYKFFQ-QKMNWADAERFCSEQA 34
>d1clia2 d.139.1.1 (A:171-345) Aminoimidazole ribonucleotide
synthetase (PurM) C-terminal domain {Escherichia coli
[TaxId: 562]}
Length = 175
Score = 25.5 bits (55), Expect = 6.3
Identities = 15/72 (20%), Positives = 27/72 (37%), Gaps = 2/72 (2%)
Query: 76 LVRKPLLDNLDKFDEYSDWFKTLPMYFLTFHG--PQPLKLVMEAVEHAMYVYDTGHVIID 133
LVRK L + K L + L + + ++E V+ + TG +
Sbjct: 26 LVRKILEVSGCDPQTTELDGKPLADHLLAPTRIYVKSVLELIEKVDVHAIAHLTGGGFWE 85
Query: 134 NVQFMLGLSDSA 145
N+ +L + A
Sbjct: 86 NIPRVLPDNTQA 97
>d2hgsa4 d.142.1.6 (A:3-201,A:304-474) Eukaryotic glutathione
synthetase ATP-binding domain {Human (Homo sapiens)
[TaxId: 9606]}
Length = 370
Score = 25.5 bits (56), Expect = 8.0
Identities = 28/113 (24%), Positives = 40/113 (35%), Gaps = 19/113 (16%)
Query: 123 YVYDTGHVIIDNVQFMLGLSDSALDRFYMQD---------TIIQEFRAFASRS---HCHV 170
V G V L SD R TI F ASR+ H HV
Sbjct: 107 QVLKEGIA--QTVFLGLNRSDYMFQRSADGSPALKQIEINTISASFGGLASRTPAVHRHV 164
Query: 171 TLVIHPRKENEQLTVNS-----VFGSAKATQESDNVLIIQQKFNQNLELKKFL 218
V+ KE ++ N+ G AKA + + +QQ+ ++ L+ L
Sbjct: 165 LSVLSKTKEAGKILSNNPSKGLALGIAKAWELYGSTKKVQQELSRPGMLEMLL 217
>d1ci9a_ e.3.1.1 (A:) Esterase EstB {Burkholderia gladioli [TaxId:
28095]}
Length = 377
Score = 25.4 bits (54), Expect = 9.5
Identities = 19/115 (16%), Positives = 32/115 (27%)
Query: 41 LDNLDKFDEYSDWFKTLPMYFLTFHGPQPLKLVMELVRKPLLDNLDKFDEYSDWFKTLPM 100
L S + + + + + L PL +YS L
Sbjct: 117 LGYWLLEGAGSVYDRLGISDGIDLRDFDLDENLRRLASAPLSFAPGSGWQYSLALDVLGA 176
Query: 101 YFLTFHGPQPLKLVMEAVEHAMYVYDTGHVIIDNVQFMLGLSDSALDRFYMQDTI 155
G V V + + D G V + +F + D + M+D I
Sbjct: 177 VVERATGQPLAAAVDALVAQPLGMRDCGFVSAEPERFAVPYHDGQPEPVRMRDGI 231
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.323 0.138 0.421
Gapped
Lambda K H
0.267 0.0466 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,098,486
Number of extensions: 50795
Number of successful extensions: 148
Number of sequences better than 10.0: 1
Number of HSP's gapped: 147
Number of HSP's successfully gapped: 50
Length of query: 291
Length of database: 2,407,596
Length adjustment: 85
Effective length of query: 206
Effective length of database: 1,240,546
Effective search space: 255552476
Effective search space used: 255552476
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 52 (24.5 bits)