RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy4524
         (929 letters)



>d3b8ma1 d.58.60.1 (A:64-330) Enterochelin transport protein FepE
           {Escherichia coli [TaxId: 562]}
          Length = 267

 Score = 29.2 bits (65), Expect = 2.3
 Identities = 10/37 (27%), Positives = 16/37 (43%), Gaps = 1/37 (2%)

Query: 811 VTMPLENEMQHPRQFTARLGVLNVSSAINT-TIFAAF 846
           VT P   + Q   +   +L VL++   I+    F  F
Sbjct: 8   VTPPEPVQWQELEKTFTKLRVLDLDIKIDRTEAFNLF 44


>d1tlqa_ a.195.1.1 (A:) Hypothetical protein YpjQ {Bacillus subtilis
           [TaxId: 1423]}
          Length = 161

 Score = 26.6 bits (59), Expect = 8.9
 Identities = 12/48 (25%), Positives = 20/48 (41%), Gaps = 8/48 (16%)

Query: 313 PLENEMRSPSKFTSKLGVLNVAMLSIALIY-----TGFGFFGYLKYGP 355
           PL++ + +        G+  +  LSI  +Y     T FG+    K G 
Sbjct: 79  PLQHLVETDEPL---YGIDEIIPLSIVNVYGSIGLTNFGYLDKEKIGI 123


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.330    0.144    0.444 

Gapped
Lambda     K      H
   0.267   0.0569    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 3,471,393
Number of extensions: 164399
Number of successful extensions: 410
Number of sequences better than 10.0: 1
Number of HSP's gapped: 410
Number of HSP's successfully gapped: 15
Length of query: 929
Length of database: 2,407,596
Length adjustment: 94
Effective length of query: 835
Effective length of database: 1,116,976
Effective search space: 932674960
Effective search space used: 932674960
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 57 (26.1 bits)