BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4525
(388 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9V3T9|ADRO_DROME NADPH:adrenodoxin oxidoreductase, mitochondrial OS=Drosophila
melanogaster GN=dare PE=2 SV=1
Length = 466
Score = 366 bits (939), Expect = e-100, Method: Compositional matrix adjust.
Identities = 207/435 (47%), Positives = 267/435 (61%), Gaps = 65/435 (14%)
Query: 16 VCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTKT 75
+CIVG+GPAGFY AQ ILK L VD+ EKLPVPFGLVR+GVAPDHPEVKNVINTFTKT
Sbjct: 32 ICIVGAGPAGFYAAQLILKQLDNCVVDVVEKLPVPFGLVRFGVAPDHPEVKNVINTFTKT 91
Query: 76 GDNPRVNFYGNICLGQDISLGDLTNAYHAVVLTYGADNDKKLNIPGEDGKNIISARSFVG 135
++PR+ ++GNI LG D+SL +L + YHAV+LTYGAD D++L + E N+ISAR FV
Sbjct: 92 AEHPRLRYFGNISLGTDVSLRELRDRYHAVLLTYGADQDRQLELENEQLDNVISARKFVA 151
Query: 136 WYNGLPEDASLDLSLDCEEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSR 195
WYNGLP +L L + TI+GQGNVA+DVAR+LLSP+D LK+TD TE++LE LS S+
Sbjct: 152 WYNGLPGAENLAPDLSGRDVTIVGQGNVAVDVARMLLSPLDALKTTDTTEYALEALSCSQ 211
Query: 196 IKSVNLVGRRGALQVAFTIKEFREMTKLPHVQTVFRNEQLCGVHEASATLARPRKRLTEL 255
++ V+LVGRRG LQ AFTIKE REM KLP+V T +R E G+ L RPRKRLTEL
Sbjct: 212 VERVHLVGRRGPLQAAFTIKELREMLKLPNVDTRWRTEDFSGIDMQLDKLQRPRKRLTEL 271
Query: 256 ILKTSNPDESKSNCSKYFRPIFLRSP-------TEF---KLNDNGAI------------- 292
+LK S ++ + + SK F PIFLR+P EF +L A+
Sbjct: 272 MLK-SLKEQGRISGSKQFLPIFLRAPKAIAPGEMEFSVTELQQEAAVPTSSTERLPSHLI 330
Query: 293 ------------TGINFANQQALVTEDTELI----------------------PSGIAFR 318
TGINF ++ V I P+G+
Sbjct: 331 LRSIGYKSSCVDTGINFDTRRGRVHNINGRILKDDATGEVDPGLYVAGWLGTGPTGVIVT 390
Query: 319 SIGYQ---SRCVDSDIPFNE-KSCTVIP---KEGVPVVTWEGWKAIDKEETERGKLKGKP 371
++ ++ + DI N + +V P +G VVTW+GW+ I+ E+ GK KGKP
Sbjct: 391 TMNGAFAVAKTICDDINTNALDTSSVKPGYDADGKRVVTWDGWQRINDFESAAGKAKGKP 450
Query: 372 REKIISIEEMISVSG 386
REKI+SIEEM+ V+G
Sbjct: 451 REKIVSIEEMLRVAG 465
>sp|P22570|ADRO_HUMAN NADPH:adrenodoxin oxidoreductase, mitochondrial OS=Homo sapiens
GN=FDXR PE=1 SV=3
Length = 491
Score = 337 bits (865), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 180/361 (49%), Positives = 243/361 (67%), Gaps = 21/361 (5%)
Query: 14 PNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFT 73
P +C+VGSGPAGFY AQ +LK PQ+ VDIYEK PVPFGLVR+GVAPDHPEVKNVINTFT
Sbjct: 39 PQICVVGSGPAGFYTAQHLLKH-PQAHVDIYEKQPVPFGLVRFGVAPDHPEVKNVINTFT 97
Query: 74 KTGDNPRVNFYGNICLGQDISLGDLTNAYHAVVLTYGADNDKKLNIPGEDGKNIISARSF 133
+T + R F+GN+ +G+D+++ +L AYHAVVL+YGA++ + L IPGE+ + SAR+F
Sbjct: 98 QTAHSGRCAFWGNVEVGRDVTVPELREAYHAVVLSYGAEDHRALEIPGEELPGVCSARAF 157
Query: 134 VGWYNGLPEDASLDLSLDCEEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLST 193
VGWYNGLPE+ L+ L C+ A ILGQGNVA+DVARILL+P + L+ TDIT+ +L L
Sbjct: 158 VGWYNGLPENQELEPDLSCDTAVILGQGNVALDVARILLTPPEHLERTDITKAALGVLRQ 217
Query: 194 SRIKSVNLVGRRGALQVAFTIKEFREMTKLPHVQTVFRNEQLCGVHEASATLARPRKRLT 253
SR+K+V LVGRRG LQVAFTIKE REM +LP + + G+ + + RPRKRLT
Sbjct: 218 SRVKTVWLVGRRGPLQVAFTIKELREMIQLPGARPILDPVDFLGLQDKIKEVPRPRKRLT 277
Query: 254 ELILKTS----NPDE--SKSNCSKYFRPIFLRSPTEFKLNDNG--------AITGINFAN 299
EL+L+T+ P E +++ S+ + F RSP + + +G A+T + +
Sbjct: 278 ELLLRTATEKPGPAEAARQASASRAWGLRFFRSPQQVLPSPDGRRAAGVRLAVTRLEGVD 337
Query: 300 Q--QALVTEDTELIPSGIAFRSIGYQSRCVDSDIPFNEKSCTVIPKEG----VPVVTWEG 353
+ +A+ T D E +P G+ SIGY+SR VD +PF+ K + EG VP + G
Sbjct: 338 EATRAVPTGDMEDLPCGLVLSSIGYKSRPVDPSVPFDSKLGVIPNVEGRVMDVPGLYCSG 397
Query: 354 W 354
W
Sbjct: 398 W 398
Score = 42.4 bits (98), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 31/49 (63%)
Query: 339 TVIPKEGVPVVTWEGWKAIDKEETERGKLKGKPREKIISIEEMISVSGN 387
++ GV V++ W+ +D EE RG+ GKPREK++ +EM+ + G+
Sbjct: 443 ALLSSRGVRPVSFSDWEKLDAEEVARGQGTGKPREKLVDPQEMLRLLGH 491
>sp|P08165|ADRO_BOVIN NADPH:adrenodoxin oxidoreductase, mitochondrial OS=Bos taurus
GN=FDXR PE=1 SV=3
Length = 492
Score = 335 bits (859), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 181/369 (49%), Positives = 240/369 (65%), Gaps = 21/369 (5%)
Query: 6 YSTISQLKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPEV 65
+ST Q P +C+VGSGPAGFY AQ +LK ++ VDIYEK VPFGLVR+GVAPDHPEV
Sbjct: 32 FSTQEQ-TPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLVRFGVAPDHPEV 90
Query: 66 KNVINTFTKTGDNPRVNFYGNICLGQDISLGDLTNAYHAVVLTYGADNDKKLNIPGEDGK 125
KNVINTFT+T + R FYGN+ +G+D+++ +L +AYHAVVL+YGA++ + L+IPGE+
Sbjct: 91 KNVINTFTQTARSDRCAFYGNVEVGRDVTVQELQDAYHAVVLSYGAEDHQALDIPGEELP 150
Query: 126 NIISARSFVGWYNGLPEDASLDLSLDCEEATILGQGNVAMDVARILLSPVDQLKSTDITE 185
+ SAR+FVGWYNGLPE+ L L C+ A ILGQGNVA+DVARILL+P D L+ TDITE
Sbjct: 151 GVFSARAFVGWYNGLPENRELAPDLSCDTAVILGQGNVALDVARILLTPPDHLEKTDITE 210
Query: 186 HSLEKLSTSRIKSVNLVGRRGALQVAFTIKEFREMTKLPHVQTVFRNEQLCGVHEASATL 245
+L L SR+K+V +VGRRG LQVAFTIKE REM +LP + + G+ +
Sbjct: 211 AALGALRQSRVKTVWIVGRRGPLQVAFTIKELREMIQLPGTRPMLDPADFLGLQDRIKEA 270
Query: 246 ARPRKRLTELILKTSNPDES------KSNCSKYFRPIFLRSPTEFKLNDNG-AITGINFA 298
ARPRKRL EL+L+T+ +++ S+ + F RSP + + +G GI A
Sbjct: 271 ARPRKRLMELLLRTATEKPGVEEAARRASASRAWGLRFFRSPQQVLPSPDGRRAAGIRLA 330
Query: 299 ---------NQQALVTEDTELIPSGIAFRSIGYQSRCVDSDIPFNEKSCTVIPKEG---- 345
+A+ T D E +P G+ SIGY+SR +D +PF+ K V EG
Sbjct: 331 VTRLEGIGEATRAVPTGDVEDLPCGLVLSSIGYKSRPIDPSVPFDPKLGVVPNMEGRVVD 390
Query: 346 VPVVTWEGW 354
VP + GW
Sbjct: 391 VPGLYCSGW 399
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 29/43 (67%)
Query: 345 GVPVVTWEGWKAIDKEETERGKLKGKPREKIISIEEMISVSGN 387
GV V++ W+ +D EE RG+ GKPREK++ +EM+ + G+
Sbjct: 450 GVWPVSFSDWEKLDAEEVSRGQASGKPREKLLDPQEMLRLLGH 492
>sp|P56522|ADRO_RAT NADPH:adrenodoxin oxidoreductase, mitochondrial OS=Rattus
norvegicus GN=Fdxr PE=1 SV=1
Length = 494
Score = 332 bits (851), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 174/361 (48%), Positives = 230/361 (63%), Gaps = 20/361 (5%)
Query: 14 PNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFT 73
P +C+VGSGPAGFY AQ +LK ++ VDIYEK VPFGLVR+GVAPDHPEVKNVINTFT
Sbjct: 41 PQICVVGSGPAGFYTAQHLLKHHTRAHVDIYEKQLVPFGLVRFGVAPDHPEVKNVINTFT 100
Query: 74 KTGDNPRVNFYGNICLGQDISLGDLTNAYHAVVLTYGADNDKKLNIPGEDGKNIISARSF 133
+T + R F GN+ +G+D+S+ +L AYHAVVL+YGA++ + L IPGE+ ++SAR+F
Sbjct: 101 QTARSDRCAFRGNVVVGRDVSVPELREAYHAVVLSYGAEDHQPLEIPGEELPGVVSARAF 160
Query: 134 VGWYNGLPEDASLDLSLDCEEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLST 193
VGWYNGLPE+ L L C+ A ILGQGNVA+DVARILL+P + L+ TDITE +L L
Sbjct: 161 VGWYNGLPENQKLAPDLSCDTAVILGQGNVALDVARILLTPPEHLEKTDITEVALGVLRQ 220
Query: 194 SRIKSVNLVGRRGALQVAFTIKEFREMTKLPHVQTVFRNEQLCGVHEASATLARPRKRLT 253
SR+K+V +VGRRG LQVAFTIKE REM +LP Q + G+ + + RPRKRLT
Sbjct: 221 SRVKTVWIVGRRGPLQVAFTIKELREMIQLPGTQPILDPSDFLGLQDRIKDVPRPRKRLT 280
Query: 254 ELILKTSNPDESKSNCSKYFRPI------FLRSPTE-FKLNDNGAITGINFA-------- 298
EL+L+T+ ++ F RSP + D + GI A
Sbjct: 281 ELLLRTATEKPGVEEAARRALASRAWGLRFFRSPQQVLPTPDGRRVAGIRLAVTRLEGVG 340
Query: 299 -NQQALVTEDTELIPSGIAFRSIGYQSRCVDSDIPFNEKSCTVIPKEG----VPVVTWEG 353
+ +A+ T D E +P G+ S+GY+SR +D +PF+ K + EG P + G
Sbjct: 341 ESTRAVPTGDVEDLPCGLLLSSVGYKSRPIDPSVPFDPKLGIIPNTEGRVVNAPGLYCSG 400
Query: 354 W 354
W
Sbjct: 401 W 401
Score = 41.6 bits (96), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 28/43 (65%)
Query: 345 GVPVVTWEGWKAIDKEETERGKLKGKPREKIISIEEMISVSGN 387
GV V++ W+ +D EE RG+ GKPREK++ EM+ + G+
Sbjct: 452 GVRPVSFSDWEKLDAEEVARGQGTGKPREKLVDRREMLQLLGH 494
>sp|P82861|ADRO_SALFO NADPH:adrenodoxin oxidoreductase, mitochondrial OS=Salvelinus
fontinalis GN=fdxr PE=2 SV=1
Length = 498
Score = 332 bits (851), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 174/347 (50%), Positives = 227/347 (65%), Gaps = 21/347 (6%)
Query: 14 PNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFT 73
P VCIVG GPAGFY AQ ++K VDIYE+LPVPFGLVR+GVAPDHPEVKNVINTFT
Sbjct: 44 PKVCIVGGGPAGFYTAQHLVKTRTDVQVDIYERLPVPFGLVRFGVAPDHPEVKNVINTFT 103
Query: 74 KTGDNPRVNFYGNICLGQDISLGDLTNAYHAVVLTYGADNDKKLNIPGEDGKNIISARSF 133
+T + R +F+GN+ +G+D+++ +L AYHAVVL+YGA+ ++ + +PGED + SA+ F
Sbjct: 104 QTARHARCSFHGNVRVGKDVTVEELQEAYHAVVLSYGAEGNRTMGVPGEDLAGVYSAKDF 163
Query: 134 VGWYNGLPEDASLDLSLDCEEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLST 193
VGWYNGLP + L L CE A ILGQGNVA+DVAR+LLSPVD LK TDIT+H+L+ L+
Sbjct: 164 VGWYNGLPRNRELRPDLSCETAVILGQGNVALDVARMLLSPVDILKKTDITQHALDALAE 223
Query: 194 SRIKSVNLVGRRGALQVAFTIKEFREMTKLPHVQTVFRNEQLCGVHEASATLARPRKRLT 253
S ++ V +VGRRG LQVA TIKE REM LP + + G+ E +LARPRKRLT
Sbjct: 224 SSVRRVLIVGRRGPLQVACTIKELREMVNLPGTRPEMEASEFEGIAETLKSLARPRKRLT 283
Query: 254 ELILKTS--NPDE------SKSNCSKYFRPIFLRSPTE-FKLNDNGAITGINFA------ 298
EL+LK + P E +K+ + FR FLR P E D GI A
Sbjct: 284 ELLLKAAIETPGEEELEKRNKAERAWGFR--FLRRPLEVLPSTDLIRAAGIRLAVNRLEG 341
Query: 299 ---NQQALVTEDTELIPSGIAFRSIGYQSRCVDSDIPFNEKSCTVIP 342
+A+ T + E + G+ SIGY+S +D +PF+ + +IP
Sbjct: 342 DGEGVRAVATGEVEDVECGLVISSIGYKSLPIDPAVPFDGRKA-IIP 387
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 42/69 (60%)
Query: 317 FRSIGYQSRCVDSDIPFNEKSCTVIPKEGVPVVTWEGWKAIDKEETERGKLKGKPREKII 376
+ IG + V S P ++ ++ K GV V++ W+ ID EET RG+ +GKPREK++
Sbjct: 428 LQDIGKGTLDVSSVKPGSQGVSALLEKRGVKPVSFSDWEKIDSEETRRGETRGKPREKML 487
Query: 377 SIEEMISVS 385
+ EM+ V+
Sbjct: 488 DVGEMLQVA 496
>sp|Q61578|ADRO_MOUSE NADPH:adrenodoxin oxidoreductase, mitochondrial OS=Mus musculus
GN=Fdxr PE=2 SV=1
Length = 494
Score = 316 bits (810), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 179/412 (43%), Positives = 241/412 (58%), Gaps = 39/412 (9%)
Query: 14 PNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFT 73
P +C+VGSGPAGFY AQ +LK + VDIYEK VPFGLVR+GVAPDHPEVKNVINTFT
Sbjct: 41 PQICVVGSGPAGFYTAQHLLKHHTHAHVDIYEKQLVPFGLVRFGVAPDHPEVKNVINTFT 100
Query: 74 KTGDNPRVNFYGNICLGQDISLGDLTNAYHAVVLTYGADNDKKLNIPGEDGKNIISARSF 133
+T + R F GN+ +G+D+S+ +L AYHAVVL+YGA++ + L IPGE+ ++SAR+F
Sbjct: 101 QTARSDRCAFQGNVVVGRDVSVPELREAYHAVVLSYGAEDHQPLGIPGEELPGVVSARAF 160
Query: 134 VGWYNGLPEDASLDLSLDCEEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLST 193
VGWYNGLPE+ L L C+ A ILGQGNVA+DVARILL+P + L+ TDITE +L L
Sbjct: 161 VGWYNGLPENQELAPDLSCDTAVILGQGNVALDVARILLTPPEHLEKTDITEAALGALRQ 220
Query: 194 SRIKSVNLVGRRGALQVAFTIKEFREMTKLPHVQTVFRNEQLCGVHEASATLARP--RKR 251
SR+K+V +VGRRG LQVAFTIKE REM +LP + + G+ + + RP R
Sbjct: 221 SRVKTVWIVGRRGPLQVAFTIKELREMIQLPGTRPILDPSDFLGLQDRIKDVPRPRRRLT 280
Query: 252 LTELILKTSNPD----ESKSNCSKYFRPIFLRSPTE-FKLNDNGAITGINFA-------- 298
L T P ++ S+ + F RSP + D + GI A
Sbjct: 281 ELLLRTATEKPGVEEAARQALASRAWGLRFFRSPQQVLPTPDGQRVAGIRLAVTSLEGVG 340
Query: 299 -NQQALVTEDTELIPSGIAFRSIGYQSRCVDSDIPFNEKSCTVIPKEG----VPVVTWEG 353
+ +A+ T D E +P G+ S+GY+SR +D +PF+ K + EG VP + G
Sbjct: 341 ESTRAVPTGDVEDLPCGLLLSSVGYKSRPIDPSVPFDPKLGVIPNTEGRVVNVPGLYCSG 400
Query: 354 W-----------KAIDK--------EETERGKLKGKPREKIISIEEMISVSG 386
W D E+ + G L PR ++I+ ++S G
Sbjct: 401 WVKRGPTGVITTTMTDSFLTSQALLEDLKAGLLPSGPRPGYVAIQALLSNRG 452
Score = 42.0 bits (97), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 16/93 (17%)
Query: 296 NFANQQALVTE-DTELIPSGIAFRSIGYQSRCVDSDIPFNEKSCTVIPKEGVPVVTWEGW 354
+F QAL+ + L+PSG + Q+ ++ GV V++ W
Sbjct: 417 SFLTSQALLEDLKAGLLPSGPRPGYVAIQA---------------LLSNRGVRPVSFSDW 461
Query: 355 KAIDKEETERGKLKGKPREKIISIEEMISVSGN 387
+ +D EE RG+ GKPREK++ EM+ + G+
Sbjct: 462 EKLDAEEVSRGQGTGKPREKLVDRREMLRLLGH 494
>sp|O59710|ADRO_SCHPO Probable NADPH:adrenodoxin oxidoreductase, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=arh1 PE=3 SV=1
Length = 469
Score = 246 bits (627), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 151/375 (40%), Positives = 211/375 (56%), Gaps = 25/375 (6%)
Query: 1 MMKRVYSTISQLKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAP 60
+KR YST + P V I+GSGPA FY A ++L+ P +D++E PVPFGLVRYGVAP
Sbjct: 5 FIKRTYSTQTS-SPVVGIIGSGPAAFYTAHRLLRNDPNVKIDMFESRPVPFGLVRYGVAP 63
Query: 61 DHPEVKNVINTFTKTGDNPRVNFYGNICLGQDISLGDLTNAYHAVVLTYGADNDKKLNIP 120
DHPEVK+V + F++ ++ + F GN+ +G D+SL DLT Y +VL YGA DK+L IP
Sbjct: 64 DHPEVKHVEHKFSEIAESTQFRFLGNVNVGTDVSLRDLTKNYDCLVLAYGAAGDKRLGIP 123
Query: 121 GEDGKNIISARSFVGWYNGLPEDASLDLSL-DCEEATILGQGNVAMDVARILLSPVDQLK 179
GED + SAR VGWYN P + +L+L L E+A ++G GNV++DVARILLS QL
Sbjct: 124 GEDLSGVYSAREVVGWYNSDPRNQNLELDLSQVEDAVVIGHGNVSLDVARILLSNPAQLS 183
Query: 180 STDITEHSLEKLSTSRIKSVNLVGRRGALQVAFTIKEFREMTKLPHVQTVF----RNEQL 235
TDI L+ L S +K +++VGRR V+FTIKE RE+ L VF N
Sbjct: 184 PTDINPLFLKSLERSNLKRLHIVGRRNIFSVSFTIKELRELFALS--SAVFFAPSFNYST 241
Query: 236 CGVHEASAT-LARPRKRLTELILKTSNPDESKSNCSKY------FRPIFLRSPTEFKLND 288
++E A+ L RPRKRL +L++ S+ + Y + F +P E L
Sbjct: 242 KWMNETDASGLDRPRKRLLKLLVSEIQKAVSEKRVAPYSKDKKCWNLEFGLTPVEI-LGH 300
Query: 289 NGAITGINFANQQALVTEDTE---LIPSGIAFRSIGYQSRCV----DSDIPFNEKSCTVI 341
G + + F ++ T+ IP+ + RSIGY+S + D +PF++ V
Sbjct: 301 KGNVENVRFQITDSIRTDAESKFTTIPAQLFIRSIGYKSMPLPGMKDVGVPFDDAKGIVK 360
Query: 342 PKEGV--PVVTWEGW 354
G P + GW
Sbjct: 361 NVNGFVRPGIYTSGW 375
Score = 33.1 bits (74), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 20/38 (52%)
Query: 347 PVVTWEGWKAIDKEETERGKLKGKPREKIISIEEMISV 384
PV+ W+ WK I E ERG EK S E+MI +
Sbjct: 426 PVIHWKDWKVIRNAEIERGLRHESLSEKFRSNEDMIKL 463
>sp|Q54KG7|ADRO_DICDI Probable NADPH:adrenodoxin oxidoreductase, mitochondrial
OS=Dictyostelium discoideum GN=fdxr PE=3 SV=1
Length = 515
Score = 225 bits (573), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 138/357 (38%), Positives = 195/357 (54%), Gaps = 26/357 (7%)
Query: 15 NVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTK 74
N+CI+GSGPAG Y A ++ + +P + + I EKLP PFGLVR G++PDH K V NT K
Sbjct: 43 NLCIIGSGPAGLYTAAKVHRQIPHANITILEKLPYPFGLVRSGISPDHQNEKKVKNTLEK 102
Query: 75 T-GDNP-RVNFYGNICLGQDISLGDLTNAYHAVVLTYGADNDKKLNIPGE-DGKNIISAR 131
++P ++ F GN+ + +DI + + +HAVVL G + DKKL IPGE KN+ AR
Sbjct: 103 VLLEHPHQIQFIGNVDIEKDIKFQYIKDNFHAVVLACGIEGDKKLGIPGELTLKNVYFAR 162
Query: 132 SFVGWYNGLPEDASLDLSLDCEEATILGQGNVAMDVARILLSP-VDQLKSTDITEHSLEK 190
F+GW NG +D L E I+GQGNVA+DVAR+LL D+LK TDIT S +K
Sbjct: 163 EFIGWLNGNLKDQHKQFDLSNENLAIVGQGNVALDVARLLLKKNSDELKKTDITSTSFDK 222
Query: 191 LSTSRIKSVNLVGRRGALQVAFTIKEFREMTKLPHVQTVFRNEQLCGVHEASAT-LARPR 249
++ S +K+++++GRRG L+V+FT KE RE+ L +V T + V E + L R +
Sbjct: 223 INKSNVKNIHIIGRRGPLEVSFTNKEIREILTLQNVNTFINDISTLDVSEEDVSKLERAK 282
Query: 250 KRLTELILKTSNP--DESKSNCSKYFRPIFLRSPTEF-------------------KLND 288
KR EL + P E +N + FLRSP E KL
Sbjct: 283 KRTFELFKQHLKPFDQEIANNGNMNLIFHFLRSPVELLDKYGSSSGSGDGMVLSKIKLEK 342
Query: 289 NGAITGINFANQQALVTEDTELIPSGIAFRSIGYQSRCVDSDIPFNEKSCTVIPKEG 345
N I ++A+ + + E+I FRSIGY +PF+ S ++ K G
Sbjct: 343 NKLIIDEKTQQKKAIGSGEFEIIECSSLFRSIGYTGTKQFPSVPFDFNSVSIPNKYG 399
Score = 37.7 bits (86), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%)
Query: 337 SCTVIPKEGVPVVTWEGWKAIDKEETERGKLKGKPREKIISIEEMISVSGNS 388
S T + + ++ + +K I+ EE +RGK KGK EKII +E+ ++ NS
Sbjct: 464 SITSLLQPNHKIINFNDYKKIESEEVKRGKEKGKLLEKIIVFDELKNIINNS 515
>sp|O32886|FPRA_MYCLE NADPH-ferredoxin reductase FprA OS=Mycobacterium leprae (strain TN)
GN=fprA PE=3 SV=1
Length = 456
Score = 224 bits (572), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 135/347 (38%), Positives = 186/347 (53%), Gaps = 31/347 (8%)
Query: 15 NVCIVGSGPAGFYCAQQILKLLPQS-----TVDIYEKLPVPFGLVRYGVAPDHPEVKNVI 69
++ IVGSGP+GF+ A +LK S VD+ E LP P+GLVR GVAPDHP++K++
Sbjct: 8 HIAIVGSGPSGFFAAASVLKAADASDEINVAVDMLEMLPTPWGLVRSGVAPDHPKIKSIS 67
Query: 70 NTFTKTGDNPRVNFYGNICLGQDISLGDLTNAYHAVVLTYGADNDKKLNIPGEDGKNIIS 129
F KT ++PR F+GN+ +G+ I +L Y AV+ GA +D+ LNIPGED I+
Sbjct: 68 KQFEKTAEDPRFRFFGNVIVGKHIEPAELAERYDAVIYAVGAQSDRALNIPGEDLPGSIA 127
Query: 130 ARSFVGWYNGLPEDASLDLSLDCEEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLE 189
A FVGWYN P L A ++G GNVA+DV RIL++ D L TDI +H+LE
Sbjct: 128 AVDFVGWYNAHPNFHERSPDLSGSRAVVIGNGNVALDVTRILITDPDVLAFTDIADHALE 187
Query: 190 KLSTSRIKSVNLVGRRGALQVAFTIKEFREMTKLPHVQTVFRNEQLCGVHEASATLARPR 249
L I+ V +VGRRG LQ AFT E RE+ + V + QL G+ + +A A
Sbjct: 188 SLRPRGIEEVVIVGRRGPLQTAFTTLELRELADIEGVDVLVDPAQLEGISDENAAAAGKT 247
Query: 250 KR-----LTELILKTSNPDESKSNCSKYFRPIFLRSPTEFKLNDNGAITGINFANQQALV 304
R L + ++T P + FR FL SP E K G + I Q LV
Sbjct: 248 TRQNIKVLRDYTVRTPKPGHRRI----VFR--FLTSPIEIK--GKGKVERIVLG-QNELV 298
Query: 305 TEDT-----------ELIPSGIAFRSIGYQSRCVDSDIPFNEKSCTV 340
T+D E +P+ + RSIGY+ +PF++ S T+
Sbjct: 299 TDDNGRVAAKDTGVREELPAQLIVRSIGYRG-VPTPGLPFDDSSVTI 344
>sp|O05783|FPRA_MYCTU NADPH-ferredoxin reductase FprA OS=Mycobacterium tuberculosis
GN=fprA PE=1 SV=1
Length = 456
Score = 223 bits (568), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 129/340 (37%), Positives = 189/340 (55%), Gaps = 19/340 (5%)
Query: 16 VCIVGSGPAGFYCAQQILKLLPQS-----TVDIYEKLPVPFGLVRYGVAPDHPEVKNVIN 70
+ IVGSGP+ F+ A +LK + VD+ E LP P+GLVR GVAPDHP++K++
Sbjct: 6 IAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVRSGVAPDHPKIKSISK 65
Query: 71 TFTKTGDNPRVNFYGNICLGQDISLGDLTNAYHAVVLTYGADNDKKLNIPGEDGKNIISA 130
F KT ++PR F+GN+ +G+ + G+L+ Y AV+ GA +D+ LNIPGED I+A
Sbjct: 66 QFEKTAEDPRFRFFGNVVVGEHVQPGELSERYDAVIYAVGAQSDRMLNIPGEDLPGSIAA 125
Query: 131 RSFVGWYNGLPEDASLDLSLDCEEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEK 190
FVGWYN P + L A ++G GNVA+DVARILL+ D L TDI +H+LE
Sbjct: 126 VDFVGWYNAHPHFEQVSPDLSGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALES 185
Query: 191 LSTSRIKSVNLVGRRGALQVAFTIKEFREMTKLPHVQTVFRNEQLCGV-HEASATLARPR 249
L I+ V +VGRRG LQ AFT E RE+ L V V +L G+ E +A + +
Sbjct: 186 LRPRGIQEVVIVGRRGPLQAAFTTLELRELADLDGVDVVIDPAELDGITDEDAAAVGKVC 245
Query: 250 KRLTELILKTSNPDESKSNCSKYFRPIFLRSPTEFK---------LNDNGAITGINFANQ 300
K+ +++ ++ + + FR FL SP E K L N ++
Sbjct: 246 KQNIKVLRGYADREPRPGHRRMVFR--FLTSPIEIKGKRKVERIVLGRNELVSD-GSGRV 302
Query: 301 QALVTEDTELIPSGIAFRSIGYQSRCVDSDIPFNEKSCTV 340
A T + E +P+ + RS+GY+ +PF+++S T+
Sbjct: 303 AAKDTGEREELPAQLVVRSVGYRG-VPTPGLPFDDQSGTI 341
>sp|P48360|ADRO_YEAST Probable NADPH:adrenodoxin oxidoreductase, mitochondrial
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=ARH1 PE=1 SV=1
Length = 493
Score = 187 bits (475), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 123/332 (37%), Positives = 177/332 (53%), Gaps = 35/332 (10%)
Query: 13 KPNVCIVGSGPAGFYCAQQILKLLP-QSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINT 71
+ V IVGSGP+GFY A +LK P V I+EKLPVPFGL RYGVAPDHPEVKN T
Sbjct: 15 RKTVSIVGSGPSGFYTAYHLLKKSPIPLNVTIWEKLPVPFGLSRYGVAPDHPEVKNCEET 74
Query: 72 FTK--------TGDNPRVNFYGNICLGQDISLGDLTNAYHAVVLTYGADNDKKLNIPGED 123
FT T + +F G I +G++I L +L + AV+L+YG D+KLNIPGE
Sbjct: 75 FTTCAEEFSSPTNQKHKFSFVGGITIGKEILLKELLDNQDAVILSYGCTGDRKLNIPGEL 134
Query: 124 G-KNIISARSFVGWYNGLPEDASLDLSLDCE-----EATILGQGNVAMDVARILLS-PVD 176
G K + S+R FV WYNG P+ A D + + I+G GNVA+D+ R+L+S +D
Sbjct: 135 GTKGVFSSREFVNWYNGHPDFAKDKRFTDFDWSKVSKVGIIGNGNVALDITRVLISNQID 194
Query: 177 QL-KSTDITEHSLEKLSTSRIKSVNLVGRRGALQVAFTIKEFREMTKLP------HVQTV 229
++ ++TDI+ +L L + +K V L+ RR + FT KE RE+ +L +
Sbjct: 195 EIWENTDISSLALNLLRRAPVKDVKLIARRDFVHSKFTNKELRELWELEKYGIRGRIDPK 254
Query: 230 FRNEQLCGVHEASATLARPRKRLTELILKTSNPDESK---------SNCSKYFRPIFLRS 280
F +++ + R R + LK N K S K++ +L++
Sbjct: 255 FFQKEMFDPSKYDRAFNR-RVEMCSEYLKPFNERSKKNYKKAPPPSSGYDKFWELDYLKT 313
Query: 281 PTEFKLNDNGAITGINFANQQALVTEDTELIP 312
P + +D GAI ++ N + + ED L P
Sbjct: 314 PLKINRDDFGAINSLSLCNNR--LNEDNSLQP 343
Score = 34.7 bits (78), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 350 TWEGWKAIDKEETERGKLKGKPREKIISIEEM 381
TW+ W+ I+K+E RGK + K R K ++ EE+
Sbjct: 455 TWKDWERINKKELLRGKKEHKTRSKFLTFEEL 486
>sp|O33064|FPRB_MYCLE Probable ferredoxin/ferredoxin--NADP reductase OS=Mycobacterium
leprae (strain TN) GN=fprB PE=3 SV=1
Length = 555
Score = 181 bits (460), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 115/335 (34%), Positives = 178/335 (53%), Gaps = 11/335 (3%)
Query: 15 NVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTK 74
V IVGSGPA Y A ++L P V+++EKLP P+GLVR G+APDH K V F +
Sbjct: 114 TVAIVGSGPAAMYAADELLTQ-PGVWVNVFEKLPTPYGLVRAGLAPDHQNTKKVTELFDR 172
Query: 75 TGDNPRVNFYGNICLGQDISLGDLTNAYHAVVLTYGADNDKKLNIPGEDGKNIISARSFV 134
++ R F+ N+ +G+ +S +L +HAV+ GA +D++LNI G +A V
Sbjct: 173 VAEHRRFRFFLNVEIGRHLSHDELLAHHHAVLYAVGAPDDRRLNIDGMGIPGTGTATELV 232
Query: 135 GWYNGLPEDASLDLSLDCEEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTS 194
W N P+ A L + L E ++G GNVA+DVAR+L + D L TDI+E +L L S
Sbjct: 233 AWINAHPDFAYLPVDLSHERVVVIGNGNVALDVARLLTADPDNLARTDISEFALHVLGGS 292
Query: 195 RIKSVNLVGRRGALQVAFTIKEFREMTKLPHVQTVFRNEQLCGVHEASATLARPRKRLTE 254
++ V + RRG AFT+ E + V + +L A+ + + RK+L
Sbjct: 293 AVREVVVAARRGPAHSAFTLPELIGLKATSEVVLDAGDRKLVEGDFATVSDSLTRKKLEV 352
Query: 255 LILKTSNPDESKSNCSKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPSG 314
L +S D SK + R + +P ++ N TG+ F+ TE++ +G
Sbjct: 353 L---SSLVDSSKPTSRRRIRLAYQLTPK--RVLGNQRATGVEFSVTG---TEESRRFDAG 404
Query: 315 IAFRSIGYQSRCVDSDIPFNEKSCTVIPKEGVPVV 349
+ S+GY+ + + D+PF+E++ VIP +G VV
Sbjct: 405 LVLTSVGYRGKRI-RDLPFDEEA-AVIPNDGGRVV 437
Score = 39.3 bits (90), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 23/36 (63%)
Query: 353 GWKAIDKEETERGKLKGKPREKIISIEEMISVSGNS 388
GW+AID E +G +G+PR K + +M++V+ +
Sbjct: 511 GWRAIDAAEIAQGSTEGRPRRKFTDVADMLAVAAGA 546
>sp|P65528|FPRB_MYCTU Probable ferredoxin/ferredoxin--NADP reductase OS=Mycobacterium
tuberculosis GN=fprB PE=3 SV=1
Length = 575
Score = 168 bits (425), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 111/333 (33%), Positives = 169/333 (50%), Gaps = 12/333 (3%)
Query: 15 NVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTK 74
V +VGSGPA Y A ++L + V+++EKLP P+GLVR GVAPDH K V F +
Sbjct: 114 TVAVVGSGPAAMYAADELL-VQQGVQVNVFEKLPTPYGLVRSGVAPDHQNTKRVTRLFDR 172
Query: 75 TGDNPRVNFYGNICLGQDISLGDLTNAYHAVVLTYGADNDKKLNIPGEDGKNIISARSFV 134
+ R FY N+ +G+ + +L +HAV+ GA +D++L I G +A V
Sbjct: 173 IAGHRRFRFYLNVEIGKHLGHAELLAHHHAVLYAVGAPDDRRLTIDGMGLPGTGTATELV 232
Query: 135 GWYNGLPEDASLDLSLDCEEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTS 194
W NG P+ L + L E I+G GNVA+DVAR+L + +L +TDI +H+L L S
Sbjct: 233 AWLNGHPDFNDLPVDLSHERVVIIGNGNVALDVARVLAADPHELAATDIADHALSALRNS 292
Query: 195 RIKSVNLVGRRGALQVAFTIKEFREMTKLPHVQTVFRNEQLCGVHEASATLARPRKRLTE 254
++ V + RRG AFT+ E +T V + Q V + A +A P R
Sbjct: 293 AVREVVVAARRGPAHSAFTLPELIGLTAGADVVLDPGDHQR--VLDDLAIVADPLTRNKL 350
Query: 255 LILKTSNPDESKSNCSKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTEL--IP 312
IL T + + + RP R ++L + Q VT EL +
Sbjct: 351 EILSTLG--DGSAPARRVGRP---RIRLAYRLTPRRVLGQRRAGGVQFSVTGTDELRQLD 405
Query: 313 SGIAFRSIGYQSRCVDSDIPFNEKSCTVIPKEG 345
+G+ SIGY+ + + D+PF+E++ ++P +G
Sbjct: 406 AGLVLTSIGYRGKPI-PDLPFDEQA-ALVPNDG 436
Score = 35.8 bits (81), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 353 GWKAIDKEETERGKLKGKPREKIISIEEMISVSGNS 388
GW+AID E RG G+ R K + EM++ + ++
Sbjct: 514 GWRAIDAAEIARGSADGRVRNKFTDVAEMLAAATSA 549
>sp|P65529|FPRB_MYCBO Probable ferredoxin/ferredoxin--NADP reductase OS=Mycobacterium
bovis (strain ATCC BAA-935 / AF2122/97) GN=fprB PE=3
SV=1
Length = 575
Score = 168 bits (425), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 111/333 (33%), Positives = 169/333 (50%), Gaps = 12/333 (3%)
Query: 15 NVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTK 74
V +VGSGPA Y A ++L + V+++EKLP P+GLVR GVAPDH K V F +
Sbjct: 114 TVAVVGSGPAAMYAADELL-VQQGVQVNVFEKLPTPYGLVRSGVAPDHQNTKRVTRLFDR 172
Query: 75 TGDNPRVNFYGNICLGQDISLGDLTNAYHAVVLTYGADNDKKLNIPGEDGKNIISARSFV 134
+ R FY N+ +G+ + +L +HAV+ GA +D++L I G +A V
Sbjct: 173 IAGHRRFRFYLNVEIGKHLGHAELLAHHHAVLYAVGAPDDRRLTIDGMGLPGTGTATELV 232
Query: 135 GWYNGLPEDASLDLSLDCEEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTS 194
W NG P+ L + L E I+G GNVA+DVAR+L + +L +TDI +H+L L S
Sbjct: 233 AWLNGHPDFNDLPVDLSHERVVIIGNGNVALDVARVLAADPHELAATDIADHALSALRNS 292
Query: 195 RIKSVNLVGRRGALQVAFTIKEFREMTKLPHVQTVFRNEQLCGVHEASATLARPRKRLTE 254
++ V + RRG AFT+ E +T V + Q V + A +A P R
Sbjct: 293 AVREVVVAARRGPAHSAFTLPELIGLTAGADVVLDPGDHQR--VLDDLAIVADPLTRNKL 350
Query: 255 LILKTSNPDESKSNCSKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTEL--IP 312
IL T + + + RP R ++L + Q VT EL +
Sbjct: 351 EILSTLG--DGSAPARRVGRP---RIRLAYRLTPRRVLGQRRAGGVQFSVTGTDELRQLD 405
Query: 313 SGIAFRSIGYQSRCVDSDIPFNEKSCTVIPKEG 345
+G+ SIGY+ + + D+PF+E++ ++P +G
Sbjct: 406 AGLVLTSIGYRGKPI-PDLPFDEQA-ALVPNDG 436
Score = 35.8 bits (81), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 353 GWKAIDKEETERGKLKGKPREKIISIEEMISVSGNS 388
GW+AID E RG G+ R K + EM++ + ++
Sbjct: 514 GWRAIDAAEIARGSADGRVRNKFTDVAEMLAAATSA 549
>sp|Q46820|YGFT_ECOLI Uncharacterized protein YgfT OS=Escherichia coli (strain K12)
GN=ygfT PE=3 SV=2
Length = 639
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 82/162 (50%), Gaps = 14/162 (8%)
Query: 16 VCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAP---DHPEVKNVINTF 72
V ++G+GPAG CA + + Q VD++++ P G++ +G+ P D + F
Sbjct: 313 VAVIGAGPAGLGCADILARAGVQ--VDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIF 370
Query: 73 TKTGDNPRVNFYGNICLGQDISLGDLTNAYHAVVLTYGADNDKKLNIPGEDGKNIISARS 132
T G ++F+ N +G+DI+ DLT+ Y AV + G + ++P ED +I A
Sbjct: 371 TAMG----IDFHLNCEIGRDITFSDLTSEYDAVFIGVGTYGMMRADLPHEDAPGVIQALP 426
Query: 133 FVGWYN----GLPEDASLDLS-LDCEEATILGQGNVAMDVAR 169
F+ + GLPE L+ ++ + +LG G+ MD R
Sbjct: 427 FLTAHTRQLMGLPESEEYPLTDVEGKRVVVLGGGDTTMDCLR 468
>sp|P96219|GLTD_MYCTU Glutamate synthase [NADPH] small chain OS=Mycobacterium
tuberculosis GN=gltD PE=3 SV=1
Length = 488
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 75/162 (46%), Gaps = 16/162 (9%)
Query: 15 NVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTK 74
V +VGSGPAG AQQ+ + TV ++E+ GL+RYG+ PE K +
Sbjct: 146 TVAVVGSGPAGLAAAQQLTRA--GHTVTVFEREDRIGGLLRYGI----PEFKMEKRHLDR 199
Query: 75 TGDNPR---VNFYGNICLGQDISLGDLTNAYHAVVLTYGADNDKKLNIPGEDGKNIISAR 131
D R F + +G DIS L + AVVL GA ++L IPG + + + A
Sbjct: 200 RLDQMRSEGTEFRPGVNVGVDISAEKLRADFDAVVLAGGATAWRELPIPGRELEGVHQAM 259
Query: 132 SFVGWYNG-------LPEDASLDLSLDCEEATILGQGNVAMD 166
F+ W N L ED ++ ++ I+G G+ D
Sbjct: 260 EFLPWANRVQEGDDVLDEDGQPPITAKGKKVVIIGGGDTGAD 301
>sp|Q8U195|SUDHA_PYRFU Sulfide dehydrogenase subunit alpha OS=Pyrococcus furiosus (strain
ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=sudA PE=1
SV=1
Length = 474
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 76/166 (45%), Gaps = 18/166 (10%)
Query: 16 VCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTKT 75
V I+G+GPAG CA + K+ V IYE L P G++ YG+ PE + K
Sbjct: 157 VAIIGAGPAGLTCAADLAKM--GYEVTIYEALHQPGGVLIYGI----PEFRLPKEIVKKE 210
Query: 76 GDNPR---VNFYGNICLGQDISLGDLTNAYHAVVLTYGADNDKKLNIPGEDGKNIISARS 132
+N R V N+ +G+ I+ +L Y A+ + GA + PG + I SA
Sbjct: 211 LENLRRLGVKIETNVLVGKTITFEELREEYDAIFIGTGAGTPRIYPWPGVNLNGIYSANE 270
Query: 133 FVGWYN-----GLPE-DASLDLSLDCEEATILGQGNVAMDVARILL 172
F+ N PE D + + + ++G GN AMD AR L
Sbjct: 271 FLTRINLMKAYKFPEYDTPIKVG---KRVAVIGGGNTAMDAARSAL 313
>sp|P37127|AEGA_ECOLI Protein AegA OS=Escherichia coli (strain K12) GN=aegA PE=3 SV=2
Length = 659
Score = 59.7 bits (143), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 79/173 (45%), Gaps = 12/173 (6%)
Query: 7 STISQLKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPEVK 66
S ++++ V I+G+GPAG CA + + V +Y++ P GL+ +G+ P K
Sbjct: 321 SHVTKVDKRVAIIGAGPAGLACADVLTR--NGVGVTVYDRHPEIGGLLTFGI-PSFKLDK 377
Query: 67 NVINTFTKTGDNPRVNFYGNICLGQDISLGDLTNAYHAVVLTYGADNDKKLNIPGEDGKN 126
+++ + ++F N +G+D+SL L Y AV + G K +P ED
Sbjct: 378 SLLARRREIFSAMGIHFELNCEVGKDVSLDSLLEQYDAVFVGVGTYRSMKAGLPNEDAPG 437
Query: 127 IISARSF-------VGWYNGLPEDASLDLSLDCEEATILGQGNVAMDVARILL 172
+ A F V LPE+ ++ + +LG G+ AMD R L
Sbjct: 438 VYDALPFLIANTKQVMGLEELPEEPFINTAG--LNVVVLGGGDTAMDCVRTAL 488
>sp|Q9C102|GLT1_SCHPO Putative glutamate synthase [NADPH] OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=glt1 PE=2 SV=1
Length = 2111
Score = 59.3 bits (142), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 62/121 (51%), Gaps = 5/121 (4%)
Query: 16 VCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTKT 75
V I+GSGPAG A Q+ + V IYE+ P GL++YG+ P+ K V+ +
Sbjct: 1758 VAIIGSGPAGLAAADQLNR--AGHHVVIYERADRPGGLLQYGI-PNMKLDKKVVERRIQL 1814
Query: 76 GDNPRVNFYGNICLGQ--DISLGDLTNAYHAVVLTYGADNDKKLNIPGEDGKNIISARSF 133
+ + N+ +G+ D+SL +L Y AVVL G+ + L IP D K I A F
Sbjct: 1815 MIDEGIEVLTNVEVGKNGDVSLDELHKVYDAVVLASGSTVPRDLPIPNRDSKGIHFAMEF 1874
Query: 134 V 134
+
Sbjct: 1875 L 1875
>sp|Q8Z5A6|PRET_SALTI NAD-dependent dihydropyrimidine dehydrogenase subunit PreT homolog
OS=Salmonella typhi GN=preT PE=3 SV=1
Length = 413
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 78/168 (46%), Gaps = 9/168 (5%)
Query: 4 RVYSTISQLKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHP 63
++Y S+ + V I+G+GPAG + + L V IYEK P P G +R+G+ P
Sbjct: 115 QIYQPGSKTRGKVAIIGAGPAGLQASVTLTHL--GYDVTIYEKQPQPGGWLRHGI-PAFR 171
Query: 64 EVKNVINTFTKTGDNPRVNFYGNICLGQDISLGDLTNAYHAVVLTYGADNDKKLNIPGED 123
++V++ VN N +G +SL L Y AV++T G L + E
Sbjct: 172 LPQSVLDQEIARIVEMGVNIKCNCDVGGSLSLAQLKAEYRAVLMTVGMSCGSDLPL-FEQ 230
Query: 124 GKNIISARSFVGWYNGLPEDASLDLSLDCEEATILGQGNVAMDVARIL 171
++ A F+ D S+ S A I+G G+VAMDVA L
Sbjct: 231 ASHVEIAVDFLQRARQADGDISVPRS-----ALIIGGGDVAMDVASTL 273
>sp|Q8ZNL8|PRET_SALTY NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC
700720) GN=preT PE=3 SV=1
Length = 413
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 78/168 (46%), Gaps = 9/168 (5%)
Query: 4 RVYSTISQLKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHP 63
++Y S+ + V I+G+GPAG + + L V IYEK P P G +R+G+ P
Sbjct: 115 QIYQPGSKTRGKVAIIGAGPAGLQASVTLTHL--GYDVTIYEKQPQPGGWLRHGI-PAFR 171
Query: 64 EVKNVINTFTKTGDNPRVNFYGNICLGQDISLGDLTNAYHAVVLTYGADNDKKLNIPGED 123
++V++ VN N +G +SL L Y AV++T G L + E
Sbjct: 172 LPQSVLDQEIARIVEMGVNIKCNCEVGGSLSLAQLKAEYRAVLMTVGMSCGSGLPL-FEQ 230
Query: 124 GKNIISARSFVGWYNGLPEDASLDLSLDCEEATILGQGNVAMDVARIL 171
++ A F+ D S+ S A I+G G+VAMDVA L
Sbjct: 231 ASHVEIAVDFLQRARQADGDISVPRS-----ALIIGGGDVAMDVASTL 273
>sp|O34399|GLTB_BACSU Glutamate synthase [NADPH] small chain OS=Bacillus subtilis (strain
168) GN=gltB PE=2 SV=2
Length = 493
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 3/119 (2%)
Query: 16 VCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTKT 75
V IVGSGPAG A Q+ + +V ++E+ GL+ YG+ P+ K ++ K
Sbjct: 155 VAIVGSGPAGLASADQLNQA--GHSVTVFERADRAGGLLTYGI-PNMKLEKGIVERRIKL 211
Query: 76 GDNPRVNFYGNICLGQDISLGDLTNAYHAVVLTYGADNDKKLNIPGEDGKNIISARSFV 134
++F N +G DI+ +L + AV+L GA + L I G D K + A ++
Sbjct: 212 LTQEGIDFVTNTEIGVDITADELKEQFDAVILCTGAQKQRDLLIEGRDSKGVHYAMDYL 270
>sp|P09832|GLTD_ECOLI Glutamate synthase [NADPH] small chain OS=Escherichia coli (strain
K12) GN=gltD PE=1 SV=3
Length = 472
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 78/171 (45%), Gaps = 14/171 (8%)
Query: 7 STISQLKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPEVK 66
S + Q V I+G+GPAG CA + + ++ V +++ P GL+ +G+ P K
Sbjct: 140 SGVKQTGKKVAIIGAGPAGLACADVLTRNGVKAVV--FDRHPEIGGLLTFGI-PAFKLEK 196
Query: 67 NVINTFTKTGDNPRVNFYGNICLGQDISLGDLTNAYHAVVLTYGADNDKKLNIPGEDGKN 126
V+ + + F N +G+D+ L DL + Y AV L G + + ED
Sbjct: 197 EVMTRRREIFTGMGIEFKLNTEVGRDVQLDDLLSDYDAVFLGVGTYQSMRGGLENEDADG 256
Query: 127 IISARSF--------VGWYNGLPEDASLDLSLDCEEATILGQGNVAMDVAR 169
+ +A F +G+ G D +S++ + +LG G+ AMD R
Sbjct: 257 VYAALPFLIANTKQLMGF--GETRDEPF-VSMEGKRVVVLGGGDTAMDCVR 304
>sp|Q12680|GLT1_YEAST Glutamate synthase [NADH] OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=GLT1 PE=1 SV=2
Length = 2145
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 60/115 (52%), Gaps = 9/115 (7%)
Query: 16 VCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAP---DHPEVKNVINTF 72
V ++GSGPAG CA + + TV +YE+ GL+ YG+ D V+ I+
Sbjct: 1785 VGVIGSGPAGLACADMLNR--AGHTVTVYERSDRCGGLLMYGIPNMKLDKAIVQRRIDLL 1842
Query: 73 TKTGDNPRVNFYGNICLGQDISLGDLTNAYHAVVLTYGADNDKKLNIPGEDGKNI 127
+ G ++F N +G+ IS+ +L N ++AVV G+ + L I G + KNI
Sbjct: 1843 SAEG----IDFVTNTEIGKTISMDELKNKHNAVVYAIGSTIPRDLPIKGRELKNI 1893
>sp|Q9LV03|GLUT1_ARATH Glutamate synthase 1 [NADH], chloroplastic OS=Arabidopsis thaliana
GN=GLT1 PE=1 SV=2
Length = 2208
Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 60/125 (48%), Gaps = 12/125 (9%)
Query: 16 VCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPE----VKNVINT 71
V I+GSGPAG A Q+ K+ V +YE+ GL+ YGV + V+ ++
Sbjct: 1848 VAIIGSGPAGLAAADQLNKM--GHLVTVYERSDRIGGLMMYGVPNMKTDKIDVVQRRVDL 1905
Query: 72 FTKTGDNPRVNFYGNICLGQD--ISLGDLTNAYHAVVLTYGADNDKKLNIPGEDGKNIIS 129
TK G +NF N +G+D SL L A+VL G+ + L +PG D +
Sbjct: 1906 MTKEG----INFVVNANIGKDPSYSLDGLKEENDAIVLAVGSTKPRDLPVPGRDLSGVHF 1961
Query: 130 ARSFV 134
A F+
Sbjct: 1962 AMEFL 1966
>sp|Q0DG35|GLT2_ORYSJ Glutamate synthase 2 [NADH], chloroplastic OS=Oryza sativa subsp.
japonica GN=Os05g0555600 PE=2 SV=2
Length = 2188
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 70/157 (44%), Gaps = 8/157 (5%)
Query: 16 VCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTKT 75
V IVGSGPAG A Q+ K+ V ++E+ GL+ YGV + + ++ +
Sbjct: 1827 VAIVGSGPAGLAAADQLNKM--GHFVTVFERADRIGGLMMYGVPNMKADKEGIVQRRVEL 1884
Query: 76 GDNPRVNFYGNICLGQD--ISLGDLTNAYHAVVLTYGADNDKKLNIPGEDGKNIISARSF 133
V F N +G D S+ L + A++L GA K L IPG + I A F
Sbjct: 1885 MAKEGVQFIVNAHVGSDPLYSVEKLRSENDAIILACGATKPKDLPIPGRELAGIHFAMEF 1944
Query: 134 VGWYNGLPEDASLD----LSLDCEEATILGQGNVAMD 166
+ D++L+ +S + ++G G+ D
Sbjct: 1945 LHANTKSLLDSNLEDGNYISAQGRKVVVIGGGDTGTD 1981
>sp|Q03460|GLSN_MEDSA Glutamate synthase [NADH], amyloplastic OS=Medicago sativa PE=1 SV=1
Length = 2194
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 69/157 (43%), Gaps = 8/157 (5%)
Query: 16 VCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTKT 75
V IVGSGP+G A Q+ K+ V ++E+ GL+ YGV + +++
Sbjct: 1827 VAIVGSGPSGLAAADQLNKM--GHIVTVFERADRIGGLMMYGVPNMKTDKVDIVQRRVNL 1884
Query: 76 GDNPRVNFYGNICLGQD--ISLGDLTNAYHAVVLTYGADNDKKLNIPGEDGKNIISARSF 133
+NF N +G D SL L A+VL GA + L +PG + + A F
Sbjct: 1885 MAEEGINFVVNANIGLDPLYSLERLREENDAIVLAVGATKPRDLPVPGRELSGVHFAMEF 1944
Query: 134 VGWYNGLPEDASLD----LSLDCEEATILGQGNVAMD 166
+ D++L +S ++ ++G G+ D
Sbjct: 1945 LHANTKSLLDSNLQDGNYISAKGKKVVVIGGGDTGTD 1981
>sp|Q0JKD0|GLT1_ORYSJ Glutamate synthase 1 [NADH], chloroplastic OS=Oryza sativa subsp.
japonica GN=Os01g0681900 PE=2 SV=1
Length = 2167
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 74/161 (45%), Gaps = 16/161 (9%)
Query: 16 VCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGV---APDHPE-VKNVINT 71
V I+GSGPAG A Q+ K+ V ++E+ GL+ YGV D E V+ +N
Sbjct: 1809 VAIIGSGPAGLAAADQLNKM--GHFVTVFERADRIGGLMMYGVPNMKTDKIEIVQRRVNL 1866
Query: 72 FTKTGDNPRVNFYGNICLGQD--ISLGDLTNAYHAVVLTYGADNDKKLNIPGEDGKNIIS 129
+ G + F N +G D S+ L + AV+L GA + L IPG + +
Sbjct: 1867 MAEEG----ITFVVNANVGSDPLYSIERLRSENDAVILACGATKPRDLGIPGRELSGVHF 1922
Query: 130 ARSFVGWYNGLPEDASLD----LSLDCEEATILGQGNVAMD 166
A F+ D++L+ +S ++ ++G G+ D
Sbjct: 1923 AMEFLHANTKSLLDSNLEDGRYISAKGKKVVVIGGGDTGTD 1963
>sp|O08340|GLTD_RHOSH Putative glutamate synthase [NADPH] small chain OS=Rhodobacter
sphaeroides GN=gltD PE=3 SV=1
Length = 413
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 61/137 (44%), Gaps = 8/137 (5%)
Query: 41 VDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTKTGDNPRVNFYGNICLGQDISLGDLTN 100
V +Y++ GL+ YG+ P K+V+ + + V F N +G+D+S +
Sbjct: 112 VTVYDRYDRAGGLLTYGI-PGFKLEKDVVARRVEQLEQAGVQFVLNCNVGEDLSFDAIRG 170
Query: 101 AYHAVVLTYGADNDKKLNIPGEDGKNIISARSFVGWYNGLP-----EDASLDLSLDCEEA 155
+ AV++ G + L PG ++ A S++ N +D LD S +
Sbjct: 171 QHDAVLIATGVYKQRDLAAPGVGSAGVVQALSYLTASNRRSFGDEVDDDGLDAS--GKRV 228
Query: 156 TILGQGNVAMDVARILL 172
++G G+ AMD R +
Sbjct: 229 VVIGGGDTAMDCVRTAI 245
>sp|Q05756|GLTD_AZOBR Glutamate synthase [NADPH] small chain OS=Azospirillum brasilense
GN=gltD PE=1 SV=3
Length = 482
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 66/140 (47%), Gaps = 11/140 (7%)
Query: 41 VDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTKTGDNPRVNFYGNICLGQDISLGDLTN 100
V +Y++ GL+ YG+ P K+V+ K + V ++ N +G+D SL +L
Sbjct: 174 VHVYDRYDRMGGLLVYGI-PGFKLEKSVVERRVKLLADAGVIYHPNFEVGRDASLPELRR 232
Query: 101 AYHAVVLTYGADNDKKLNIPGEDGKNIISARSFVGWYNGLP--------EDASLDLSLDC 152
+ AV++ G + + PG NI++A ++ N + E+ SL+ +
Sbjct: 233 KHVAVLVATGVYKARDIKAPGSGLGNIVAALDYLTTSNKVSLGDTVEAYENGSLNAA--G 290
Query: 153 EEATILGQGNVAMDVARILL 172
+ +LG G+ AMD R +
Sbjct: 291 KHVVVLGGGDTAMDCVRTAI 310
>sp|Q8X645|PRET_ECO57 NAD-dependent dihydropyrimidine dehydrogenase subunit PreT
OS=Escherichia coli O157:H7 GN=preT PE=3 SV=1
Length = 412
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 76/168 (45%), Gaps = 12/168 (7%)
Query: 5 VYSTISQLKPNVCIVGSGPAGFYCAQQILKLLPQS-TVDIYEKLPVPFGLVRYGVAPDHP 63
+Y ++ V I+G+GPAG Q + L Q V IYEK P G +R G+ P
Sbjct: 116 IYQPGTKTLGKVAIIGAGPAGL---QASVTLTNQGYDVTIYEKEAHPGGWLRNGI-PQFR 171
Query: 64 EVKNVINTFTKTGDNPRVNFYGNICLGQDISLGDLTNAYHAVVLTYGADNDKKLNIPGED 123
++V++ + V N +G+ ++L L AV++T G + L P +
Sbjct: 172 LPQSVLDAEIARIEKMGVTIKCNNEIGKTLTLEQLKAENRAVLVTVGLSSGSGL--PLFE 229
Query: 124 GKNIISARSFVGWYNGLPEDASLDLSLDCEEATILGQGNVAMDVARIL 171
++ A F+ D S+ S A I+G G+VAMDVA L
Sbjct: 230 HSDVEIAVDFLLRARQAQGDISIPQS-----ALIIGGGDVAMDVASTL 272
>sp|P76440|PRET_ECOLI NAD-dependent dihydropyrimidine dehydrogenase sunbunit PreT
OS=Escherichia coli (strain K12) GN=preT PE=1 SV=1
Length = 412
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 75/168 (44%), Gaps = 12/168 (7%)
Query: 5 VYSTISQLKPNVCIVGSGPAGFYCAQQILKLLPQS-TVDIYEKLPVPFGLVRYGVAPDHP 63
+Y ++ V I+G+GPAG Q + L Q V IYEK P G +R G+ P
Sbjct: 116 IYQPGTKTLGKVAIIGAGPAGL---QASVTLTNQGYDVTIYEKEAHPGGWLRNGI-PQFR 171
Query: 64 EVKNVINTFTKTGDNPRVNFYGNICLGQDISLGDLTNAYHAVVLTYGADNDKKLNIPGED 123
++V++ + V N +G ++L L AV++T G + L P +
Sbjct: 172 LPQSVLDAEIARIEKMGVTIKCNNEVGNTLTLEQLKAENRAVLVTVGLSSGSGL--PLFE 229
Query: 124 GKNIISARSFVGWYNGLPEDASLDLSLDCEEATILGQGNVAMDVARIL 171
++ A F+ D S+ S A I+G G+VAMDVA L
Sbjct: 230 HSDVEIAVDFLQRARQAQGDISIPQS-----ALIIGGGDVAMDVASTL 272
>sp|Q8XD75|YGFK_ECO57 Uncharacterized protein YgfK OS=Escherichia coli O157:H7 GN=ygfK
PE=4 SV=1
Length = 1032
Score = 40.8 bits (94), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 53/105 (50%), Gaps = 8/105 (7%)
Query: 92 DISLGDLTNA-YHAVVLTYGADNDKKLNIPGEDGKNIISARSFVGWYNGLPEDASLDLSL 150
D+++ L N +H V++ G D + + + G D +N++ + F+ YN + +L L
Sbjct: 624 DLTVEQLKNQDFHYVLIATGTDKNSGVKLAG-DNQNVLKSLPFLREYN---KGTALKLG- 678
Query: 151 DCEEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSR 195
+ ++G GN AMD AR L K+T + SL+++ R
Sbjct: 679 --KHVVVVGAGNTAMDCARAALRVPGVEKATVVYRRSLQEMPAWR 721
>sp|Q46811|YGFK_ECOLI Uncharacterized protein YgfK OS=Escherichia coli (strain K12)
GN=ygfK PE=4 SV=1
Length = 1032
Score = 40.4 bits (93), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 52/105 (49%), Gaps = 8/105 (7%)
Query: 92 DISLGDLTN-AYHAVVLTYGADNDKKLNIPGEDGKNIISARSFVGWYNGLPEDASLDLSL 150
D+++ L N +H V++ G D + + + G D +N+ + F+ YN + +L L
Sbjct: 624 DLTIEQLKNQGFHYVLIATGTDKNSGVKLAG-DNQNVWKSLPFLREYN---KGTALKLG- 678
Query: 151 DCEEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSR 195
+ ++G GN AMD AR L K+T + SL+++ R
Sbjct: 679 --KHVVVVGAGNTAMDCARAALRVPGVEKATIVYRRSLQEMPAWR 721
>sp|P45444|DYHC_EMENI Dynein heavy chain, cytoplasmic OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=nudA
PE=3 SV=2
Length = 4345
Score = 36.2 bits (82), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 40/78 (51%), Gaps = 11/78 (14%)
Query: 107 LTYGADNDKKLNIPGEDGKNIISARSFVGWYNGLPED---ASLDLSLDCEEATILGQGNV 163
L G +ND+ L +PGE G +FV W N LPE L L + E+ ++G G
Sbjct: 4269 LVEGVENDECLILPGETG-----LPAFVEWVNKLPEREPPTYLGLPANAEKLLLVGHGKK 4323
Query: 164 AM-DVARI--LLSPVDQL 178
+ D+ARI LL +QL
Sbjct: 4324 MISDLARITSLLDEGEQL 4341
>sp|A6T656|MTNA_KLEP7 Methylthioribose-1-phosphate isomerase OS=Klebsiella pneumoniae
subsp. pneumoniae (strain ATCC 700721 / MGH 78578)
GN=mtnA PE=3 SV=1
Length = 342
Score = 34.3 bits (77), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 182 DITEHSLEKLSTSRIKSVNLVGRRGALQVAFTIKEFREMTKLPHVQTVFRNEQLCG-VHE 240
D + +LE L +R +VNL+ ++ A +++ + + ++ V ++QLC + E
Sbjct: 73 DALQQALETLRAARPTAVNLMNNLDRMKQALAREDYPQALEAEALRLVEEDKQLCARIAE 132
Query: 241 ASATLARPRKRL 252
A + L +P RL
Sbjct: 133 AGSALVKPGSRL 144
>sp|Q10062|PPOX_SCHPO Protoporphyrinogen oxidase OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=hem14 PE=3 SV=1
Length = 490
Score = 33.9 bits (76), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 22/34 (64%)
Query: 15 NVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLP 48
++ I G G AG A + +L+P+ T+D+YEK P
Sbjct: 2 SIAICGGGIAGLSTAFYLARLIPKCTIDLYEKGP 35
>sp|A1RV38|RFCS2_PYRIL Replication factor C small subunit 2 OS=Pyrobaculum islandicum
(strain DSM 4184 / JCM 9189) GN=rfcS2 PE=3 SV=1
Length = 320
Score = 33.9 bits (76), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Query: 61 DHPEVKNVINTFTKTGDNPRVNFYGNICLGQDISLGDLTNAYHAVVLTYGADNDKKLNIP 120
D EVK+ + F K+G+ P + FYG G+ L + Y +N +LN
Sbjct: 20 DLEEVKSRLREFVKSGNMPHLLFYGPPGTGKTTMALVLARELYG---EYWRENTLELNAS 76
Query: 121 GEDGKNIISAR 131
E G N+I R
Sbjct: 77 DERGINVIRER 87
>sp|P0C927|ASB14_RAT Ankyrin repeat and SOCS box protein 14 OS=Rattus norvegicus
GN=Asb14 PE=2 SV=1
Length = 596
Score = 33.9 bits (76), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 44/86 (51%), Gaps = 7/86 (8%)
Query: 105 VVLTYGADNDKKLNIPGEDGKNIISARSFVGWYNGLPEDASLDLSLDCEEATILGQGNVA 164
++L YG D ++ + P G+ + +F GW + + +D ++ CE T+ +++
Sbjct: 449 MLLNYGYDTERCFDCP--HGERVHRCCTFEGWTSTVIKD-----TMFCEVITLSWLQHLS 501
Query: 165 MDVARILLSPVDQLKSTDITEHSLEK 190
V R++L VDQ++ + LEK
Sbjct: 502 GKVVRVMLDYVDQVQICSKLKAVLEK 527
>sp|B5XZW2|MTNA_KLEP3 Methylthioribose-1-phosphate isomerase OS=Klebsiella pneumoniae
(strain 342) GN=mtnA PE=3 SV=1
Length = 342
Score = 33.5 bits (75), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 182 DITEHSLEKLSTSRIKSVNLVGRRGALQVAFTIKEFREMTKLPHVQTVFRNEQLCG-VHE 240
D + +LE L +R +VNL+ ++ A +++ + + ++ V ++QLC + E
Sbjct: 73 DALQQALETLRAARPTAVNLMNNLDRMKQALAREDYPQALEAEALRLVEEDKQLCDRIAE 132
Query: 241 ASATLARPRKRL 252
A + L +P RL
Sbjct: 133 AGSALVKPGSRL 144
>sp|A4W9M3|SYT_ENT38 Threonine--tRNA ligase OS=Enterobacter sp. (strain 638) GN=thrS
PE=3 SV=1
Length = 642
Score = 33.5 bits (75), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 38/99 (38%), Gaps = 9/99 (9%)
Query: 8 TISQLKPNVCIVGSGPA---GFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPE 64
I QL PN + GP GFY + L Q +D EK Y V +
Sbjct: 82 AIKQLWPNTKM-AIGPVIDNGFYYDVDLDHTLTQEDIDALEKRMHELAETNYDVIKKNVS 140
Query: 65 VKNVINTFTKTGDNPRVNFYGNICLGQDISLGDLTNAYH 103
TF K G+N +V+ L ++IS D YH
Sbjct: 141 WHEARETFVKRGENYKVSI-----LDENISHDDKPGLYH 174
>sp|A1RSA2|RFCS1_PYRIL Replication factor C small subunit 1 OS=Pyrobaculum islandicum
(strain DSM 4184 / JCM 9189) GN=rfcS1 PE=3 SV=1
Length = 329
Score = 33.5 bits (75), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Query: 61 DHPEVKNVINTFTKTGDNPRVNFYGNICLGQDISLGDLTNAYHAVVLTYGADNDKKLNIP 120
D EVK+ + F K+G+ P + FYG G+ L + Y +N +LN
Sbjct: 20 DLEEVKSRLREFVKSGNMPHLLFYGPPGTGKTTMALVLARELYG---EYWRENTLELNAS 76
Query: 121 GEDGKNIISAR 131
E G N+I R
Sbjct: 77 DERGINVIRER 87
>sp|B3ESC6|PTH_AMOA5 Peptidyl-tRNA hydrolase OS=Amoebophilus asiaticus (strain 5a2)
GN=pth PE=3 SV=1
Length = 191
Score = 33.1 bits (74), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Query: 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRY---GVAPDHPEVKNV 68
+KP + SG A Y + LK+ ++T+ I + L +PFG +R G + H +K+
Sbjct: 59 IKPTTYMNLSGKAAQYWINK-LKIPIENTLTIVDDLALPFGKLRLRPQGSSAGHNGLKS- 116
Query: 69 INTFTKTGDNPRVNFYGNICLGQDISLGDLTN 100
+ + KT PR+ F +G D + G +N
Sbjct: 117 LEEYLKTQAYPRLRF----GIGNDFTKGQQSN 144
>sp|Q8C6Y6|ASB14_MOUSE Ankyrin repeat and SOCS box protein 14 OS=Mus musculus GN=Asb14
PE=2 SV=2
Length = 587
Score = 33.1 bits (74), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 44/86 (51%), Gaps = 7/86 (8%)
Query: 105 VVLTYGADNDKKLNIPGEDGKNIISARSFVGWYNGLPEDASLDLSLDCEEATILGQGNVA 164
++L YG D ++ + P G+ + +F GW + + +D ++ CE T+ +++
Sbjct: 439 MLLNYGYDTERCFDCP--HGERVHRFCTFEGWTSTVIKD-----TMFCEVITLSWLQHLS 491
Query: 165 MDVARILLSPVDQLKSTDITEHSLEK 190
V R++L VDQ++ + LEK
Sbjct: 492 GKVVRVMLDYVDQVQICSKLKAVLEK 517
>sp|Q84JN6|FB11_ARATH F-box protein At1g20360 OS=Arabidopsis thaliana GN=At1g20360 PE=2
SV=1
Length = 302
Score = 33.1 bits (74), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 7/58 (12%)
Query: 258 KTSNPDESKSNCSKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPSGI 315
KT+ +SKS+ +K+ +P++L + ND G+I N +QA LIPSG
Sbjct: 181 KTTINADSKSDLTKWMKPVYLEGTLHWLRND-GSIIAFNPETEQA------RLIPSGF 231
>sp|C5CGP2|LDH_KOSOT L-lactate dehydrogenase OS=Kosmotoga olearia (strain TBF 19.5.1)
GN=ldh PE=3 SV=1
Length = 323
Score = 32.0 bits (71), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 43/110 (39%), Gaps = 16/110 (14%)
Query: 267 SNCSKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPSGIAFRSIGYQSRC 326
S+ + Y P+ ++ ++ L N + I Q +L+ S S
Sbjct: 46 SHGAPYVHPVRIKGGNDYSLTKNSDVVVITAGRAQKPGETRLQLLKSNAKI-----ISSI 100
Query: 327 VDSDIPFNEKSCTVIPKEGVPVVTWEGWKAIDKEETERGKLKGKPREKII 376
V+S + ++E ++ V V+TW WK G PRE+II
Sbjct: 101 VESCLKYSENPIILMVSNPVDVLTWVAWKK-----------SGLPRERII 139
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.135 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 144,830,292
Number of Sequences: 539616
Number of extensions: 6272752
Number of successful extensions: 15372
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 40
Number of HSP's that attempted gapping in prelim test: 15283
Number of HSP's gapped (non-prelim): 79
length of query: 388
length of database: 191,569,459
effective HSP length: 119
effective length of query: 269
effective length of database: 127,355,155
effective search space: 34258536695
effective search space used: 34258536695
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)