Query psy4525
Match_columns 388
No_of_seqs 282 out of 2615
Neff 9.2
Searched_HMMs 29240
Date Fri Aug 16 19:24:53 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4525.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/4525hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1cjc_A Protein (adrenodoxin re 100.0 3.2E-50 1.1E-54 396.6 26.3 375 11-386 4-459 (460)
2 1lqt_A FPRA; NADP+ derivative, 100.0 1.1E-49 3.7E-54 392.4 23.3 368 13-386 3-455 (456)
3 2vdc_G Glutamate synthase [NAD 100.0 2.8E-32 9.5E-37 268.0 12.2 276 11-359 120-418 (456)
4 4a5l_A Thioredoxin reductase; 99.9 3.6E-27 1.2E-31 220.6 16.8 262 12-359 3-285 (314)
5 3itj_A Thioredoxin reductase 1 99.9 4.8E-26 1.6E-30 214.8 20.4 262 12-360 21-309 (338)
6 3oc4_A Oxidoreductase, pyridin 99.9 1E-25 3.6E-30 221.7 21.2 249 14-345 3-267 (452)
7 1gte_A Dihydropyrimidine dehyd 99.9 7.9E-27 2.7E-31 250.0 14.2 260 12-343 186-466 (1025)
8 3r9u_A Thioredoxin reductase; 99.9 2E-25 6.9E-30 208.4 20.7 255 12-359 3-285 (315)
9 2q7v_A Thioredoxin reductase; 99.9 2.7E-25 9.1E-30 209.1 21.1 243 12-345 7-272 (325)
10 3lzw_A Ferredoxin--NADP reduct 99.9 1.2E-25 4E-30 211.6 18.2 240 13-345 7-273 (332)
11 1zmd_A Dihydrolipoyl dehydroge 99.9 7.9E-26 2.7E-30 223.9 17.5 251 12-345 5-308 (474)
12 3f8d_A Thioredoxin reductase ( 99.9 2.6E-25 8.9E-30 208.3 20.0 241 13-345 15-275 (323)
13 3lxd_A FAD-dependent pyridine 99.9 3.6E-26 1.2E-30 222.6 14.6 250 12-345 8-273 (415)
14 2a87_A TRXR, TR, thioredoxin r 99.9 2.2E-25 7.6E-30 210.7 19.0 258 11-359 12-289 (335)
15 1mo9_A ORF3; nucleotide bindin 99.9 1.6E-25 5.5E-30 224.2 18.2 251 11-345 41-341 (523)
16 1vdc_A NTR, NADPH dependent th 99.9 4E-25 1.4E-29 208.5 19.9 252 13-344 8-281 (333)
17 2qae_A Lipoamide, dihydrolipoy 99.9 1.4E-25 4.9E-30 221.7 17.4 247 13-345 2-302 (468)
18 1trb_A Thioredoxin reductase; 99.9 3E-25 1E-29 208.1 17.3 244 13-344 5-268 (320)
19 3cty_A Thioredoxin reductase; 99.9 9.7E-25 3.3E-29 204.8 20.6 255 13-359 16-289 (319)
20 3kd9_A Coenzyme A disulfide re 99.9 1.4E-25 4.9E-30 220.6 15.6 250 13-345 3-268 (449)
21 1fl2_A Alkyl hydroperoxide red 99.9 1.6E-24 5.3E-29 202.4 21.1 241 14-345 2-265 (310)
22 1ebd_A E3BD, dihydrolipoamide 99.9 7.6E-25 2.6E-29 215.8 19.4 244 13-345 3-296 (455)
23 4gcm_A TRXR, thioredoxin reduc 99.9 8.6E-25 2.9E-29 204.5 18.8 255 13-359 6-279 (312)
24 1dxl_A Dihydrolipoamide dehydr 99.9 1.7E-25 5.7E-30 221.4 14.6 250 11-345 4-305 (470)
25 3ef6_A Toluene 1,2-dioxygenase 99.9 4.3E-26 1.5E-30 221.7 10.2 246 14-345 3-263 (410)
26 2zbw_A Thioredoxin reductase; 99.9 9.8E-25 3.4E-29 206.0 19.2 247 13-344 5-274 (335)
27 2hqm_A GR, grase, glutathione 99.9 2.3E-25 7.9E-30 220.8 15.4 243 12-345 10-310 (479)
28 1ges_A Glutathione reductase; 99.9 1.7E-25 5.7E-30 220.1 14.1 241 13-345 4-291 (450)
29 3fg2_P Putative rubredoxin red 99.9 1.3E-25 4.6E-30 217.8 12.8 248 13-345 1-263 (404)
30 2q0l_A TRXR, thioredoxin reduc 99.9 2E-24 6.9E-29 201.7 20.2 242 14-345 2-269 (311)
31 2wpf_A Trypanothione reductase 99.9 4.2E-25 1.4E-29 219.7 16.2 246 13-345 7-318 (495)
32 1onf_A GR, grase, glutathione 99.9 5.7E-25 2E-29 219.1 17.0 253 13-360 2-314 (500)
33 2r9z_A Glutathione amide reduc 99.9 3.1E-25 1.1E-29 218.9 14.9 240 13-345 4-290 (463)
34 3l8k_A Dihydrolipoyl dehydroge 99.9 5.4E-25 1.8E-29 217.5 16.6 247 13-345 4-296 (466)
35 3urh_A Dihydrolipoyl dehydroge 99.9 9.8E-25 3.3E-29 217.0 18.0 248 11-345 23-326 (491)
36 3dk9_A Grase, GR, glutathione 99.9 6.5E-25 2.2E-29 217.6 16.4 247 13-345 20-319 (478)
37 1xdi_A RV3303C-LPDA; reductase 99.9 6.3E-25 2.2E-29 218.8 16.3 243 14-345 3-305 (499)
38 2a8x_A Dihydrolipoyl dehydroge 99.9 6.4E-25 2.2E-29 216.8 16.1 243 14-345 4-297 (464)
39 3lad_A Dihydrolipoamide dehydr 99.9 1.5E-24 5.3E-29 214.8 18.9 246 12-345 2-306 (476)
40 1fec_A Trypanothione reductase 99.9 1.2E-24 4.2E-29 216.1 18.1 246 13-345 3-314 (490)
41 3ab1_A Ferredoxin--NADP reduct 99.9 3.3E-24 1.1E-28 204.6 20.4 245 12-344 13-285 (360)
42 3klj_A NAD(FAD)-dependent dehy 99.9 1.9E-26 6.4E-31 222.1 4.8 234 11-345 7-253 (385)
43 3gwf_A Cyclohexanone monooxyge 99.9 1.1E-24 3.7E-29 218.4 16.1 164 13-211 8-216 (540)
44 1v59_A Dihydrolipoamide dehydr 99.9 2.6E-24 8.7E-29 213.3 18.5 248 13-345 5-313 (478)
45 3ntd_A FAD-dependent pyridine 99.9 7E-25 2.4E-29 221.8 14.6 252 14-345 2-291 (565)
46 3uox_A Otemo; baeyer-villiger 99.9 3.7E-24 1.3E-28 214.8 19.3 172 12-211 8-223 (545)
47 2yqu_A 2-oxoglutarate dehydrog 99.9 1.2E-24 4E-29 214.4 15.4 242 14-345 2-290 (455)
48 3iwa_A FAD-dependent pyridine 99.9 1.5E-24 5.1E-29 214.6 15.6 253 13-345 3-282 (472)
49 1zk7_A HGII, reductase, mercur 99.9 6.1E-24 2.1E-28 210.0 19.8 241 12-345 3-297 (467)
50 2eq6_A Pyruvate dehydrogenase 99.9 2.3E-24 7.9E-29 212.8 16.1 246 13-345 6-297 (464)
51 2xve_A Flavin-containing monoo 99.9 8.1E-24 2.8E-28 208.7 19.8 209 14-327 3-279 (464)
52 4b1b_A TRXR, thioredoxin reduc 99.9 4.5E-25 1.5E-29 220.4 10.9 240 13-343 42-343 (542)
53 1q1r_A Putidaredoxin reductase 99.9 1.4E-24 4.8E-29 212.3 14.0 250 13-345 4-272 (431)
54 4ap3_A Steroid monooxygenase; 99.9 5.2E-25 1.8E-29 221.1 11.0 167 13-213 21-231 (549)
55 4dna_A Probable glutathione re 99.9 2.1E-24 7.2E-29 213.1 14.9 241 13-345 5-294 (463)
56 4eqs_A Coenzyme A disulfide re 99.9 3.3E-25 1.1E-29 217.0 8.9 244 14-346 1-265 (437)
57 2bc0_A NADH oxidase; flavoprot 99.9 1.9E-24 6.4E-29 214.8 14.5 250 13-345 35-314 (490)
58 1hyu_A AHPF, alkyl hydroperoxi 99.9 1.8E-23 6.2E-28 209.1 21.2 245 11-346 210-477 (521)
59 2cdu_A NADPH oxidase; flavoenz 99.9 3.6E-24 1.2E-28 210.8 15.6 250 14-345 1-270 (452)
60 1lvl_A Dihydrolipoamide dehydr 99.9 4.5E-24 1.5E-28 210.3 15.9 240 12-345 4-293 (458)
61 3ics_A Coenzyme A-disulfide re 99.9 3.3E-24 1.1E-28 217.8 14.8 252 11-345 34-306 (588)
62 3o0h_A Glutathione reductase; 99.9 6E-24 2.1E-28 210.9 16.2 241 13-345 26-314 (484)
63 3ic9_A Dihydrolipoamide dehydr 99.9 4E-24 1.4E-28 212.5 14.9 242 13-342 8-297 (492)
64 1ojt_A Surface protein; redox- 99.9 2E-24 6.7E-29 214.3 12.5 245 13-345 6-312 (482)
65 2v3a_A Rubredoxin reductase; a 99.9 3.5E-24 1.2E-28 206.4 13.7 246 13-345 4-265 (384)
66 3qfa_A Thioredoxin reductase 1 99.9 1.4E-23 4.7E-28 209.9 18.4 249 12-345 31-342 (519)
67 3dgh_A TRXR-1, thioredoxin red 99.9 1.2E-23 4.2E-28 208.6 17.8 248 11-345 7-314 (483)
68 1nhp_A NADH peroxidase; oxidor 99.9 7.9E-24 2.7E-28 208.0 15.4 251 14-345 1-269 (447)
69 3dgz_A Thioredoxin reductase 2 99.9 3.9E-24 1.3E-28 212.5 13.3 248 12-345 5-314 (488)
70 2gv8_A Monooxygenase; FMO, FAD 99.9 3.4E-23 1.2E-27 203.5 19.9 163 12-208 5-248 (447)
71 4fk1_A Putative thioredoxin re 99.9 3E-23 1E-27 193.5 18.2 251 11-361 4-275 (304)
72 1xhc_A NADH oxidase /nitrite r 99.9 5.1E-25 1.7E-29 210.9 5.8 238 12-345 7-256 (367)
73 3s5w_A L-ornithine 5-monooxyge 99.9 1.8E-23 6.2E-28 206.3 17.1 301 13-361 30-420 (463)
74 2gqw_A Ferredoxin reductase; f 99.9 3.5E-23 1.2E-27 201.0 18.5 237 12-345 6-261 (408)
75 3fbs_A Oxidoreductase; structu 99.9 4.8E-23 1.6E-27 190.6 17.4 242 14-359 3-266 (297)
76 4a9w_A Monooxygenase; baeyer-v 99.9 3.4E-23 1.2E-27 196.4 16.7 161 13-208 3-197 (357)
77 3cgb_A Pyridine nucleotide-dis 99.9 1.5E-23 5.1E-28 207.8 14.7 251 13-345 36-306 (480)
78 3d1c_A Flavin-containing putat 99.9 6.1E-23 2.1E-27 196.2 18.3 226 13-326 4-274 (369)
79 4g6h_A Rotenone-insensitive NA 99.9 1.8E-24 6.2E-29 215.0 6.5 288 11-359 40-373 (502)
80 3k30_A Histamine dehydrogenase 99.9 2.8E-23 9.7E-28 214.4 15.2 227 11-327 389-627 (690)
81 1ps9_A 2,4-dienoyl-COA reducta 99.9 1.3E-22 4.4E-27 209.0 17.7 143 11-173 371-515 (671)
82 2gag_A Heterotetrameric sarcos 99.9 2.2E-22 7.6E-27 214.2 16.5 228 13-326 128-385 (965)
83 2x8g_A Thioredoxin glutathione 99.9 2.6E-22 8.9E-27 204.2 15.5 248 11-345 105-421 (598)
84 1o94_A Tmadh, trimethylamine d 99.9 1.2E-22 4.3E-27 210.6 12.9 230 11-326 387-648 (729)
85 1w4x_A Phenylacetone monooxyge 99.9 8.5E-22 2.9E-26 198.0 14.9 165 12-209 15-222 (542)
86 1m6i_A Programmed cell death p 99.9 2.1E-22 7.2E-27 200.1 9.9 255 12-345 10-307 (493)
87 4b63_A L-ornithine N5 monooxyg 99.9 1.1E-20 3.8E-25 188.0 20.6 172 13-210 39-285 (501)
88 3sx6_A Sulfide-quinone reducta 99.8 1.5E-21 5E-26 191.3 5.5 280 13-359 4-306 (437)
89 3h8l_A NADH oxidase; membrane 99.8 5E-21 1.7E-25 185.8 7.8 249 14-344 2-293 (409)
90 1y56_A Hypothetical protein PH 99.8 2E-19 6.7E-24 178.7 15.3 192 14-326 109-315 (493)
91 3hyw_A Sulfide-quinone reducta 99.8 1.3E-20 4.4E-25 184.1 3.9 239 14-327 3-259 (430)
92 3vrd_B FCCB subunit, flavocyto 99.8 1.8E-19 6.1E-24 174.4 9.2 272 13-359 2-295 (401)
93 3h28_A Sulfide-quinone reducta 99.8 5.5E-20 1.9E-24 179.7 2.2 253 14-344 3-280 (430)
94 3fpz_A Thiazole biosynthetic e 99.2 3.5E-13 1.2E-17 126.5 -4.1 139 12-172 64-203 (326)
95 2ywl_A Thioredoxin reductase r 98.9 3.6E-09 1.2E-13 89.9 8.6 96 14-113 2-110 (180)
96 2gqf_A Hypothetical protein HI 98.9 7E-10 2.4E-14 106.9 4.2 98 14-113 5-168 (401)
97 3v76_A Flavoprotein; structura 98.9 4E-09 1.4E-13 102.1 8.1 101 11-113 25-187 (417)
98 2ywl_A Thioredoxin reductase r 98.8 9.9E-09 3.4E-13 87.2 8.5 128 154-345 3-131 (180)
99 2cul_A Glucose-inhibited divis 98.7 1.1E-07 3.7E-12 84.4 12.3 98 13-113 3-125 (232)
100 1rp0_A ARA6, thiazole biosynth 98.7 7.6E-08 2.6E-12 88.1 11.0 98 13-113 39-191 (284)
101 2bry_A NEDD9 interacting prote 98.7 5.5E-08 1.9E-12 96.3 10.1 101 11-113 90-230 (497)
102 3alj_A 2-methyl-3-hydroxypyrid 98.7 5.9E-08 2E-12 92.5 9.7 101 11-113 9-160 (379)
103 3ces_A MNMG, tRNA uridine 5-ca 98.6 1.1E-07 3.8E-12 95.8 10.4 35 12-48 27-61 (651)
104 3kkj_A Amine oxidase, flavin-c 98.6 3.5E-08 1.2E-12 88.3 5.7 40 13-54 2-41 (336)
105 3oz2_A Digeranylgeranylglycero 98.6 3.2E-08 1.1E-12 94.3 5.4 37 13-51 4-40 (397)
106 3nlc_A Uncharacterized protein 98.5 1.7E-07 5.7E-12 93.5 9.0 36 13-50 107-142 (549)
107 2e5v_A L-aspartate oxidase; ar 98.5 5.6E-08 1.9E-12 95.6 4.2 31 15-47 1-31 (472)
108 2i0z_A NAD(FAD)-utilizing dehy 98.5 3.1E-07 1.1E-11 89.6 8.5 39 12-52 25-63 (447)
109 3nix_A Flavoprotein/dehydrogen 98.5 2.3E-07 7.9E-12 89.5 7.3 99 13-113 5-166 (421)
110 3jsk_A Cypbp37 protein; octame 98.4 1.5E-06 5.2E-11 81.0 11.5 40 13-52 79-118 (344)
111 1yvv_A Amine oxidase, flavin-c 98.4 1.1E-06 3.8E-11 81.8 10.0 39 14-54 3-41 (336)
112 3cgv_A Geranylgeranyl reductas 98.4 4.4E-07 1.5E-11 86.7 7.3 38 13-52 4-41 (397)
113 2x3n_A Probable FAD-dependent 98.3 1.6E-06 5.6E-11 83.0 10.4 99 13-113 6-166 (399)
114 1y0p_A Fumarate reductase flav 98.3 1.7E-06 5.9E-11 87.0 10.6 40 12-53 125-164 (571)
115 3ihg_A RDME; flavoenzyme, anth 98.3 2.8E-06 9.4E-11 84.8 11.4 36 13-50 5-40 (535)
116 3fmw_A Oxygenase; mithramycin, 98.3 1.3E-06 4.5E-11 87.7 8.8 99 13-113 49-207 (570)
117 3e1t_A Halogenase; flavoprotei 98.3 1.5E-06 5E-11 86.3 8.8 34 13-48 7-40 (512)
118 2vou_A 2,6-dihydroxypyridine h 98.3 3.2E-06 1.1E-10 80.9 10.8 37 12-50 4-40 (397)
119 2zxi_A TRNA uridine 5-carboxym 98.3 2.4E-06 8.1E-11 85.9 10.0 34 13-48 27-60 (637)
120 1ryi_A Glycine oxidase; flavop 98.3 1.6E-06 5.3E-11 82.4 8.2 37 12-50 16-52 (382)
121 2gjc_A Thiazole biosynthetic e 98.3 3.2E-06 1.1E-10 78.4 10.0 39 14-52 66-104 (326)
122 3rp8_A Flavoprotein monooxygen 98.3 2.4E-06 8.4E-11 82.0 9.7 37 12-50 22-58 (407)
123 3i3l_A Alkylhalidase CMLS; fla 98.3 1.9E-06 6.5E-11 86.9 9.2 37 11-49 21-57 (591)
124 3qj4_A Renalase; FAD/NAD(P)-bi 98.2 2E-06 6.7E-11 80.6 7.9 41 14-54 2-43 (342)
125 3c4a_A Probable tryptophan hyd 98.2 1.1E-06 3.6E-11 83.9 5.9 98 14-113 1-143 (381)
126 1nhp_A NADH peroxidase; oxidor 98.2 3.4E-06 1.2E-10 82.1 9.6 92 12-114 148-247 (447)
127 2xdo_A TETX2 protein; tetracyc 98.2 5.9E-06 2E-10 79.1 11.0 36 12-49 25-60 (398)
128 1qo8_A Flavocytochrome C3 fuma 98.2 2.2E-06 7.7E-11 86.1 8.1 39 12-52 120-158 (566)
129 4dgk_A Phytoene dehydrogenase; 98.2 9.4E-07 3.2E-11 87.3 5.0 40 13-54 1-40 (501)
130 1xhc_A NADH oxidase /nitrite r 98.2 2.8E-06 9.7E-11 80.6 8.0 89 13-114 143-235 (367)
131 2gmh_A Electron transfer flavo 98.2 6E-06 2.1E-10 83.2 10.7 38 13-52 35-78 (584)
132 1k0i_A P-hydroxybenzoate hydro 98.2 3.5E-06 1.2E-10 80.5 8.4 34 14-49 3-36 (394)
133 3atr_A Conserved archaeal prot 98.2 3.1E-06 1.1E-10 82.6 8.0 99 13-113 6-162 (453)
134 1y56_B Sarcosine oxidase; dehy 98.2 8.1E-06 2.8E-10 77.5 10.7 34 13-48 5-38 (382)
135 2yqu_A 2-oxoglutarate dehydrog 98.2 3.6E-06 1.2E-10 82.2 8.4 91 12-114 166-265 (455)
136 2qa1_A PGAE, polyketide oxygen 98.2 4.9E-06 1.7E-10 82.3 9.1 101 11-113 9-165 (500)
137 2v3a_A Rubredoxin reductase; a 98.1 6.6E-06 2.3E-10 78.4 9.7 91 13-114 145-244 (384)
138 4gde_A UDP-galactopyranose mut 98.1 9.8E-07 3.4E-11 87.3 3.9 43 11-54 8-50 (513)
139 2gqw_A Ferredoxin reductase; f 98.1 5.8E-06 2E-10 79.6 9.1 92 12-114 144-240 (408)
140 2eq6_A Pyruvate dehydrogenase 98.1 6.3E-06 2.2E-10 80.7 9.4 91 12-114 168-272 (464)
141 3cp8_A TRNA uridine 5-carboxym 98.1 7.3E-06 2.5E-10 82.6 10.0 35 12-48 20-54 (641)
142 1d4d_A Flavocytochrome C fumar 98.1 8.9E-06 3E-10 81.8 10.2 39 13-53 126-164 (572)
143 2bc0_A NADH oxidase; flavoprot 98.1 8.7E-06 3E-10 80.3 9.8 92 12-114 193-292 (490)
144 4b1b_A TRXR, thioredoxin reduc 98.1 4E-06 1.4E-10 83.5 7.4 90 11-113 221-319 (542)
145 2bry_A NEDD9 interacting prote 98.1 3.9E-07 1.3E-11 90.1 -0.0 183 101-326 37-232 (497)
146 2qa2_A CABE, polyketide oxygen 98.1 6.1E-06 2.1E-10 81.6 8.4 101 11-113 10-166 (499)
147 3k7m_X 6-hydroxy-L-nicotine ox 98.1 3.8E-06 1.3E-10 81.1 6.2 47 14-62 2-51 (431)
148 1lvl_A Dihydrolipoamide dehydr 98.1 5.7E-06 1.9E-10 80.9 7.4 91 12-114 170-269 (458)
149 4eqs_A Coenzyme A disulfide re 98.0 5.5E-06 1.9E-10 80.5 6.8 90 12-113 146-240 (437)
150 3klj_A NAD(FAD)-dependent dehy 98.0 3.1E-06 1E-10 80.9 4.8 87 13-114 146-232 (385)
151 1ebd_A E3BD, dihydrolipoamide 98.0 1.2E-05 4.2E-10 78.4 9.2 91 12-114 169-271 (455)
152 1zk7_A HGII, reductase, mercur 98.0 9.7E-06 3.3E-10 79.4 8.3 90 12-114 175-272 (467)
153 1v59_A Dihydrolipoamide dehydr 98.0 1.2E-05 4.1E-10 79.0 9.0 91 12-114 182-288 (478)
154 2e1m_A L-glutamate oxidase; L- 98.0 5.3E-06 1.8E-10 78.7 6.2 42 11-54 42-84 (376)
155 2b9w_A Putative aminooxidase; 98.0 5.7E-06 1.9E-10 79.8 6.3 41 12-54 5-46 (424)
156 3oc4_A Oxidoreductase, pyridin 98.0 2.5E-05 8.5E-10 76.1 10.9 92 12-114 146-245 (452)
157 3lxd_A FAD-dependent pyridine 98.0 1.7E-05 5.7E-10 76.5 9.4 91 13-114 152-252 (415)
158 1ojt_A Surface protein; redox- 98.0 1E-05 3.4E-10 79.6 7.9 91 12-114 184-287 (482)
159 2r9z_A Glutathione amide reduc 98.0 1.3E-05 4.3E-10 78.5 8.5 91 12-114 165-265 (463)
160 1rsg_A FMS1 protein; FAD bindi 98.0 3.5E-06 1.2E-10 83.7 4.5 41 12-54 7-48 (516)
161 2bcg_G Secretory pathway GDP d 98.0 5.6E-06 1.9E-10 80.8 5.9 42 12-55 10-51 (453)
162 3c4n_A Uncharacterized protein 98.0 8.8E-06 3E-10 78.2 7.1 36 14-49 37-72 (405)
163 3fg2_P Putative rubredoxin red 98.0 1.7E-05 5.7E-10 76.2 9.0 92 12-114 141-242 (404)
164 3cgb_A Pyridine nucleotide-dis 98.0 9.7E-06 3.3E-10 79.7 7.5 91 12-114 185-283 (480)
165 3ef6_A Toluene 1,2-dioxygenase 98.0 7.7E-06 2.6E-10 78.8 6.6 92 12-114 142-242 (410)
166 1ges_A Glutathione reductase; 98.0 1.1E-05 3.9E-10 78.5 7.8 91 12-114 166-266 (450)
167 1s3e_A Amine oxidase [flavin-c 98.0 5.7E-06 2E-10 82.2 5.7 40 13-54 4-43 (520)
168 2jae_A L-amino acid oxidase; o 98.0 8.3E-06 2.8E-10 80.3 6.4 42 11-54 9-50 (489)
169 3nrn_A Uncharacterized protein 98.0 6.4E-06 2.2E-10 79.4 5.4 39 14-54 1-39 (421)
170 2cul_A Glucose-inhibited divis 97.9 2.8E-05 9.4E-10 68.7 9.1 46 271-326 82-127 (232)
171 1onf_A GR, grase, glutathione 97.9 2.8E-05 9.6E-10 76.8 9.9 90 13-114 176-276 (500)
172 3ka7_A Oxidoreductase; structu 97.9 7.2E-06 2.5E-10 79.0 5.3 39 14-54 1-39 (425)
173 1v0j_A UDP-galactopyranose mut 97.9 8.2E-06 2.8E-10 78.3 5.4 41 12-54 6-47 (399)
174 1zmd_A Dihydrolipoyl dehydroge 97.9 3.2E-05 1.1E-09 75.8 9.4 92 12-114 177-283 (474)
175 2cdu_A NADPH oxidase; flavoenz 97.9 2.2E-05 7.5E-10 76.5 8.2 92 12-114 148-248 (452)
176 2a8x_A Dihydrolipoyl dehydroge 97.9 2.4E-05 8.2E-10 76.5 8.4 91 12-114 170-272 (464)
177 3nks_A Protoporphyrinogen oxid 97.9 9.6E-06 3.3E-10 79.4 5.3 39 14-54 3-43 (477)
178 3hdq_A UDP-galactopyranose mut 97.9 1.1E-05 3.9E-10 77.0 5.6 42 12-55 28-69 (397)
179 1xdi_A RV3303C-LPDA; reductase 97.9 4.5E-05 1.5E-09 75.3 10.0 91 12-114 181-280 (499)
180 2wpf_A Trypanothione reductase 97.9 2.4E-05 8.1E-10 77.3 7.9 93 12-114 190-293 (495)
181 1q1r_A Putidaredoxin reductase 97.9 3.1E-05 1.1E-09 75.0 8.6 91 12-113 148-250 (431)
182 2hqm_A GR, grase, glutathione 97.9 2.2E-05 7.4E-10 77.2 7.6 91 12-114 184-286 (479)
183 3ics_A Coenzyme A-disulfide re 97.9 3.2E-05 1.1E-09 78.0 9.0 91 12-114 186-283 (588)
184 1trb_A Thioredoxin reductase; 97.9 4.2E-05 1.5E-09 70.5 9.1 89 12-114 144-248 (320)
185 2yg5_A Putrescine oxidase; oxi 97.8 8.2E-06 2.8E-10 79.4 4.2 40 13-54 5-44 (453)
186 1fec_A Trypanothione reductase 97.8 2.5E-05 8.7E-10 76.9 7.6 93 12-114 186-289 (490)
187 2ivd_A PPO, PPOX, protoporphyr 97.8 1.3E-05 4.4E-10 78.5 5.5 41 12-54 15-55 (478)
188 3urh_A Dihydrolipoyl dehydroge 97.8 4.6E-05 1.6E-09 75.1 9.4 91 12-114 197-301 (491)
189 1sez_A Protoporphyrinogen oxid 97.8 1.4E-05 4.7E-10 79.0 5.5 41 12-54 12-52 (504)
190 3dme_A Conserved exported prot 97.8 1.5E-05 5E-10 75.0 5.5 37 13-51 4-40 (369)
191 3kd9_A Coenzyme A disulfide re 97.8 5.8E-05 2E-09 73.4 9.8 90 12-113 147-244 (449)
192 3ic9_A Dihydrolipoamide dehydr 97.8 6.4E-05 2.2E-09 74.1 10.2 91 11-114 172-275 (492)
193 2qae_A Lipoamide, dihydrolipoy 97.8 4.4E-05 1.5E-09 74.7 8.9 91 12-114 173-277 (468)
194 3dk9_A Grase, GR, glutathione 97.8 5.1E-05 1.7E-09 74.5 9.3 91 12-114 186-294 (478)
195 3i6d_A Protoporphyrinogen oxid 97.8 7.2E-06 2.5E-10 80.0 3.2 40 13-54 5-50 (470)
196 3h8l_A NADH oxidase; membrane 97.8 4.9E-05 1.7E-09 72.9 8.7 115 153-327 2-116 (409)
197 1mo9_A ORF3; nucleotide bindin 97.8 5.5E-05 1.9E-09 75.2 9.3 89 14-114 215-317 (523)
198 2vvm_A Monoamine oxidase N; FA 97.8 1.5E-05 5.2E-10 78.5 5.1 39 14-54 40-78 (495)
199 3ntd_A FAD-dependent pyridine 97.8 4.7E-05 1.6E-09 76.3 8.5 91 12-114 150-268 (565)
200 4hb9_A Similarities with proba 97.8 1.9E-05 6.5E-10 75.4 5.4 35 14-50 2-36 (412)
201 3lad_A Dihydrolipoamide dehydr 97.8 5.9E-05 2E-09 73.9 9.0 91 12-114 179-281 (476)
202 1dxl_A Dihydrolipoamide dehydr 97.8 2.6E-05 8.8E-10 76.4 6.4 91 12-114 176-280 (470)
203 3iwa_A FAD-dependent pyridine 97.8 4.9E-05 1.7E-09 74.5 8.3 92 12-114 158-259 (472)
204 2bi7_A UDP-galactopyranose mut 97.8 2.2E-05 7.5E-10 74.9 5.5 40 13-54 3-42 (384)
205 4dsg_A UDP-galactopyranose mut 97.8 2.6E-05 8.8E-10 76.8 6.1 43 12-56 8-51 (484)
206 1rp0_A ARA6, thiazole biosynth 97.8 0.00011 3.9E-09 66.8 10.0 56 270-326 132-193 (284)
207 3hyw_A Sulfide-quinone reducta 97.8 6E-05 2E-09 73.0 8.5 108 153-325 3-110 (430)
208 2zbw_A Thioredoxin reductase; 97.7 8.3E-05 2.8E-09 69.0 9.1 89 12-114 151-253 (335)
209 1i8t_A UDP-galactopyranose mut 97.7 2E-05 6.9E-10 74.7 4.8 39 14-54 2-40 (367)
210 3lov_A Protoporphyrinogen oxid 97.7 2.1E-05 7.3E-10 77.0 5.0 40 13-54 4-45 (475)
211 4dna_A Probable glutathione re 97.7 6.5E-05 2.2E-09 73.4 8.3 91 12-114 169-269 (463)
212 3c96_A Flavin-containing monoo 97.7 2.9E-05 1E-09 74.6 5.7 36 13-50 4-40 (410)
213 3d1c_A Flavin-containing putat 97.7 9.5E-05 3.3E-09 69.5 9.2 98 12-114 165-273 (369)
214 3dje_A Fructosyl amine: oxygen 97.7 3.4E-05 1.2E-09 74.7 6.2 39 12-52 5-44 (438)
215 2iid_A L-amino-acid oxidase; f 97.7 2.4E-05 8.1E-10 77.1 5.1 41 12-54 32-72 (498)
216 3o0h_A Glutathione reductase; 97.7 6.7E-05 2.3E-09 73.8 8.0 92 11-114 189-289 (484)
217 3vrd_B FCCB subunit, flavocyto 97.7 7E-05 2.4E-09 71.6 7.8 110 152-327 2-111 (401)
218 1m6i_A Programmed cell death p 97.6 0.00011 3.9E-09 72.3 8.9 93 13-114 180-283 (493)
219 3ihm_A Styrene monooxygenase A 97.6 3.1E-05 1.1E-09 75.0 4.7 35 12-48 21-55 (430)
220 3nlc_A Uncharacterized protein 97.6 0.0001 3.4E-09 73.4 8.4 47 270-325 232-278 (549)
221 1d5t_A Guanine nucleotide diss 97.6 4.9E-05 1.7E-09 73.7 5.9 41 12-54 5-45 (433)
222 2oln_A NIKD protein; flavoprot 97.6 3.9E-05 1.3E-09 73.2 5.0 36 13-50 4-39 (397)
223 3qfa_A Thioredoxin reductase 1 97.6 0.00016 5.5E-09 71.7 9.5 90 12-114 209-316 (519)
224 3lzw_A Ferredoxin--NADP reduct 97.6 0.00026 8.8E-09 65.3 10.1 118 153-327 8-129 (332)
225 3dgh_A TRXR-1, thioredoxin red 97.6 0.00015 5E-09 71.3 8.6 89 12-113 186-289 (483)
226 2z3y_A Lysine-specific histone 97.6 6.1E-05 2.1E-09 77.1 5.9 42 11-54 105-146 (662)
227 3dgz_A Thioredoxin reductase 2 97.6 0.0002 6.9E-09 70.4 9.4 89 12-113 184-287 (488)
228 3ab1_A Ferredoxin--NADP reduct 97.6 0.00016 5.6E-09 67.8 8.1 89 12-114 162-264 (360)
229 4at0_A 3-ketosteroid-delta4-5a 97.6 5.8E-05 2E-09 74.8 5.2 40 13-54 41-80 (510)
230 1c0p_A D-amino acid oxidase; a 97.5 8.2E-05 2.8E-09 70.0 6.0 36 12-49 5-40 (363)
231 3s5w_A L-ornithine 5-monooxyge 97.5 0.0002 6.8E-09 69.8 8.9 39 12-50 226-264 (463)
232 3ps9_A TRNA 5-methylaminomethy 97.5 7.7E-05 2.6E-09 76.5 6.2 37 13-51 272-308 (676)
233 3fbs_A Oxidoreductase; structu 97.5 0.00031 1.1E-08 63.6 9.6 113 153-327 3-115 (297)
234 2gf3_A MSOX, monomeric sarcosi 97.5 7.8E-05 2.7E-09 70.7 5.7 37 13-51 3-39 (389)
235 2xag_A Lysine-specific histone 97.5 7.8E-05 2.7E-09 77.9 6.0 42 11-54 276-317 (852)
236 1b37_A Protein (polyamine oxid 97.5 7.5E-05 2.6E-09 73.1 5.6 42 12-55 3-45 (472)
237 3f8d_A Thioredoxin reductase ( 97.5 0.00022 7.6E-09 65.4 8.5 111 153-327 16-128 (323)
238 3sx6_A Sulfide-quinone reducta 97.5 7.3E-05 2.5E-09 72.5 5.4 111 153-327 5-115 (437)
239 3e1t_A Halogenase; flavoprotei 97.5 0.00025 8.7E-09 70.1 9.0 52 270-326 123-174 (512)
240 3h28_A Sulfide-quinone reducta 97.5 0.00024 8.3E-09 68.6 8.7 109 153-326 3-111 (430)
241 3pvc_A TRNA 5-methylaminomethy 97.5 0.0001 3.6E-09 75.7 6.3 37 13-51 264-300 (689)
242 2uzz_A N-methyl-L-tryptophan o 97.5 6.8E-05 2.3E-09 70.7 4.5 35 14-50 3-37 (372)
243 4g6h_A Rotenone-insensitive NA 97.5 0.00023 7.8E-09 70.3 8.5 90 14-113 218-332 (502)
244 4a9w_A Monooxygenase; baeyer-v 97.5 0.00014 4.7E-09 67.8 6.6 44 270-323 88-131 (357)
245 3nyc_A D-arginine dehydrogenas 97.5 8.8E-05 3E-09 70.0 5.2 37 12-51 8-44 (381)
246 3v76_A Flavoprotein; structura 97.5 0.00038 1.3E-08 67.0 9.6 45 270-325 144-188 (417)
247 3cgv_A Geranylgeranyl reductas 97.5 0.00047 1.6E-08 65.4 10.1 137 153-324 5-162 (397)
248 3itj_A Thioredoxin reductase 1 97.5 0.00024 8.1E-09 65.7 7.9 86 12-114 172-272 (338)
249 3p1w_A Rabgdi protein; GDI RAB 97.4 0.00011 3.7E-09 71.8 5.1 42 11-54 18-59 (475)
250 3nix_A Flavoprotein/dehydrogen 97.4 0.00052 1.8E-08 65.8 9.9 49 270-324 118-166 (421)
251 1vdc_A NTR, NADPH dependent th 97.4 0.00052 1.8E-08 63.5 9.4 86 12-114 158-260 (333)
252 2x8g_A Thioredoxin glutathione 97.4 0.00047 1.6E-08 69.6 9.6 90 12-114 285-396 (598)
253 2vou_A 2,6-dihydroxypyridine h 97.4 0.0012 4E-08 63.0 11.8 133 152-325 5-154 (397)
254 2r0c_A REBC; flavin adenine di 97.4 0.00013 4.3E-09 73.0 5.3 36 13-50 26-61 (549)
255 3gwf_A Cyclohexanone monooxyge 97.4 0.00082 2.8E-08 66.9 10.9 45 274-326 105-151 (540)
256 2a87_A TRXR, TR, thioredoxin r 97.4 0.00051 1.7E-08 63.8 8.8 86 12-114 154-253 (335)
257 2x3n_A Probable FAD-dependent 97.4 0.0012 4.1E-08 62.8 11.6 61 249-326 106-168 (399)
258 2q0l_A TRXR, thioredoxin reduc 97.4 0.00073 2.5E-08 61.8 9.7 86 12-114 142-242 (311)
259 3atr_A Conserved archaeal prot 97.3 0.00082 2.8E-08 65.3 10.4 141 153-326 7-164 (453)
260 3g5s_A Methylenetetrahydrofola 97.3 0.00022 7.4E-09 67.4 5.9 33 14-48 2-34 (443)
261 2q7v_A Thioredoxin reductase; 97.3 0.00073 2.5E-08 62.3 9.6 86 12-114 151-250 (325)
262 3l8k_A Dihydrolipoyl dehydroge 97.3 0.00044 1.5E-08 67.6 8.4 89 12-114 171-273 (466)
263 3da1_A Glycerol-3-phosphate de 97.3 0.00018 6E-09 72.1 5.6 40 12-53 17-56 (561)
264 3pl8_A Pyranose 2-oxidase; sub 97.3 0.00016 5.4E-09 73.4 5.3 54 270-326 272-326 (623)
265 3alj_A 2-methyl-3-hydroxypyrid 97.3 0.00066 2.2E-08 64.2 9.3 44 270-326 119-162 (379)
266 2qcu_A Aerobic glycerol-3-phos 97.3 0.0002 6.7E-09 70.7 5.8 36 13-50 3-38 (501)
267 3r9u_A Thioredoxin reductase; 97.3 0.00077 2.6E-08 61.5 9.4 86 12-114 146-245 (315)
268 2pyx_A Tryptophan halogenase; 97.3 0.00014 4.8E-09 72.2 4.7 37 13-49 7-53 (526)
269 2xve_A Flavin-containing monoo 97.3 0.00055 1.9E-08 66.8 8.8 54 271-327 114-171 (464)
270 4fk1_A Putative thioredoxin re 97.3 0.001 3.5E-08 60.8 10.1 23 305-327 98-120 (304)
271 1fl2_A Alkyl hydroperoxide red 97.3 0.00073 2.5E-08 61.8 9.1 84 12-113 143-242 (310)
272 4ap3_A Steroid monooxygenase; 97.3 0.00053 1.8E-08 68.5 8.6 45 274-326 117-163 (549)
273 2e4g_A Tryptophan halogenase; 97.3 0.00023 7.7E-09 71.2 5.8 38 12-49 24-62 (550)
274 2i0z_A NAD(FAD)-utilizing dehy 97.3 0.00071 2.4E-08 65.7 9.2 46 270-324 146-191 (447)
275 3g3e_A D-amino-acid oxidase; F 97.3 0.00011 3.8E-09 68.8 3.3 34 14-49 1-40 (351)
276 3oz2_A Digeranylgeranylglycero 97.3 0.00092 3.1E-08 63.0 9.8 137 154-325 6-163 (397)
277 4gut_A Lysine-specific histone 97.3 0.0002 7E-09 74.2 5.3 41 12-54 335-375 (776)
278 2aqj_A Tryptophan halogenase, 97.3 0.00025 8.6E-09 70.6 5.8 37 13-49 5-42 (538)
279 3axb_A Putative oxidoreductase 97.3 0.00013 4.5E-09 70.7 3.6 37 12-50 22-59 (448)
280 2gag_B Heterotetrameric sarcos 97.2 0.00027 9.2E-09 67.3 5.3 37 13-50 21-58 (405)
281 2gqf_A Hypothetical protein HI 97.2 0.0018 6.1E-08 61.9 10.9 47 270-326 121-170 (401)
282 4at0_A 3-ketosteroid-delta4-5a 97.2 0.00066 2.3E-08 67.1 7.9 50 270-324 214-264 (510)
283 3cty_A Thioredoxin reductase; 97.2 0.00087 3E-08 61.6 8.1 84 13-114 155-253 (319)
284 2wdq_A Succinate dehydrogenase 97.2 0.00026 9E-09 71.2 4.8 36 13-50 7-42 (588)
285 1y0p_A Fumarate reductase flav 97.2 0.0018 6E-08 65.0 10.7 51 270-324 267-317 (571)
286 4a5l_A Thioredoxin reductase; 97.1 0.0011 3.7E-08 60.7 8.3 36 12-49 151-186 (314)
287 3k30_A Histamine dehydrogenase 97.1 0.00075 2.6E-08 69.3 8.0 92 12-114 522-625 (690)
288 2rgh_A Alpha-glycerophosphate 97.1 0.00044 1.5E-08 69.4 5.9 39 12-52 31-69 (571)
289 3uox_A Otemo; baeyer-villiger 97.1 0.00067 2.3E-08 67.6 7.1 45 274-326 105-151 (545)
290 2h88_A Succinate dehydrogenase 97.1 0.00033 1.1E-08 70.9 4.8 35 13-49 18-52 (621)
291 2bs2_A Quinol-fumarate reducta 97.1 0.00037 1.2E-08 71.0 4.9 36 13-50 5-40 (660)
292 2weu_A Tryptophan 5-halogenase 97.1 0.00024 8.1E-09 70.2 3.5 36 14-49 3-39 (511)
293 2gmh_A Electron transfer flavo 97.1 0.0033 1.1E-07 63.2 11.5 56 270-325 156-218 (584)
294 2gv8_A Monooxygenase; FMO, FAD 97.1 0.0023 7.9E-08 62.0 10.2 36 12-49 211-247 (447)
295 3ayj_A Pro-enzyme of L-phenyla 97.1 0.00018 6.2E-09 73.4 2.3 36 13-50 56-100 (721)
296 3rp8_A Flavoprotein monooxygen 97.0 0.0038 1.3E-07 59.5 11.4 134 152-326 23-183 (407)
297 3ces_A MNMG, tRNA uridine 5-ca 97.0 0.0046 1.6E-07 62.3 12.4 46 271-326 138-183 (651)
298 1chu_A Protein (L-aspartate ox 97.0 0.00045 1.5E-08 68.8 5.0 37 13-52 8-44 (540)
299 1kf6_A Fumarate reductase flav 97.0 0.00036 1.2E-08 70.4 4.3 35 13-49 5-41 (602)
300 3dme_A Conserved exported prot 97.0 0.0054 1.9E-07 57.1 11.8 49 270-325 162-210 (369)
301 1qo8_A Flavocytochrome C3 fuma 97.0 0.0024 8.2E-08 63.9 9.8 51 270-324 262-312 (566)
302 2zxi_A TRNA uridine 5-carboxym 97.0 0.0039 1.3E-07 62.6 11.2 46 271-326 137-182 (637)
303 2dkh_A 3-hydroxybenzoate hydro 97.0 0.0005 1.7E-08 69.9 4.6 37 13-50 32-68 (639)
304 1pn0_A Phenol 2-monooxygenase; 97.0 0.00037 1.3E-08 71.2 3.6 37 13-49 8-47 (665)
305 3gyx_A Adenylylsulfate reducta 97.0 0.00061 2.1E-08 69.4 5.1 37 13-49 22-62 (662)
306 2xdo_A TETX2 protein; tetracyc 96.9 0.011 3.7E-07 56.1 13.6 58 249-326 127-184 (398)
307 1pj5_A N,N-dimethylglycine oxi 96.9 0.00082 2.8E-08 70.5 6.1 36 12-49 3-39 (830)
308 1d4d_A Flavocytochrome C fumar 96.9 0.0074 2.5E-07 60.4 12.8 51 270-324 267-317 (572)
309 3i3l_A Alkylhalidase CMLS; fla 96.9 0.0017 5.8E-08 65.3 7.9 50 270-325 140-189 (591)
310 1w4x_A Phenylacetone monooxyge 96.9 0.0057 2E-07 60.8 11.7 44 272-323 110-153 (542)
311 3ps9_A TRNA 5-methylaminomethy 96.9 0.0053 1.8E-07 62.8 11.5 60 270-339 429-490 (676)
312 3fmw_A Oxygenase; mithramycin, 96.9 0.0028 9.6E-08 63.5 9.1 136 153-325 50-208 (570)
313 1jnr_A Adenylylsulfate reducta 96.9 0.00098 3.3E-08 67.8 5.7 35 13-49 22-60 (643)
314 1hyu_A AHPF, alkyl hydroperoxi 96.9 0.0028 9.6E-08 62.7 8.9 84 12-113 354-453 (521)
315 3dje_A Fructosyl amine: oxygen 96.8 0.0078 2.7E-07 57.9 11.8 48 270-326 173-223 (438)
316 4gcm_A TRXR, thioredoxin reduc 96.8 0.0027 9.4E-08 58.0 8.0 37 12-50 144-180 (312)
317 2gag_B Heterotetrameric sarcos 96.8 0.0022 7.4E-08 60.9 7.5 46 270-325 186-231 (405)
318 1yvv_A Amine oxidase, flavin-c 96.8 0.0046 1.6E-07 57.0 9.4 42 272-323 119-161 (336)
319 2e4g_A Tryptophan halogenase; 96.8 0.0084 2.9E-07 59.7 11.8 48 270-326 206-254 (550)
320 2aqj_A Tryptophan halogenase, 96.8 0.0074 2.5E-07 59.9 11.2 48 270-326 177-224 (538)
321 1kdg_A CDH, cellobiose dehydro 96.8 0.0011 3.7E-08 66.1 5.1 37 11-49 5-41 (546)
322 1k0i_A P-hydroxybenzoate hydro 96.8 0.0037 1.2E-07 59.3 8.6 51 270-326 115-165 (394)
323 3t37_A Probable dehydrogenase; 96.7 0.001 3.5E-08 65.9 4.5 37 12-49 16-52 (526)
324 3jsk_A Cypbp37 protein; octame 96.7 0.0083 2.8E-07 55.8 10.3 55 271-325 174-252 (344)
325 1ps9_A 2,4-dienoyl-COA reducta 96.7 0.0033 1.1E-07 64.2 8.4 92 12-114 493-629 (671)
326 2gjc_A Thiazole biosynthetic e 96.7 0.0044 1.5E-07 57.3 8.3 55 271-325 160-240 (326)
327 4hb9_A Similarities with proba 96.7 0.0093 3.2E-07 56.4 10.9 43 274-325 125-167 (412)
328 2vdc_G Glutamate synthase [NAD 96.7 0.0027 9.3E-08 61.7 7.2 37 11-49 262-299 (456)
329 4g65_A TRK system potassium up 96.6 0.009 3.1E-07 58.1 10.5 34 13-48 3-36 (461)
330 3ihg_A RDME; flavoenzyme, anth 96.6 0.0086 2.9E-07 59.3 10.4 64 249-325 119-184 (535)
331 1o94_A Tmadh, trimethylamine d 96.6 0.0018 6.2E-08 66.8 5.6 91 12-114 527-647 (729)
332 3pvc_A TRNA 5-methylaminomethy 96.6 0.011 3.8E-07 60.5 11.4 60 270-339 424-486 (689)
333 1y56_B Sarcosine oxidase; dehy 96.6 0.015 5.2E-07 54.6 11.4 46 270-325 161-206 (382)
334 2qa2_A CABE, polyketide oxygen 96.6 0.014 4.8E-07 57.3 11.4 138 152-325 12-167 (499)
335 2jbv_A Choline oxidase; alcoho 96.5 0.0019 6.5E-08 64.4 5.1 49 1-50 1-49 (546)
336 3c96_A Flavin-containing monoo 96.5 0.0095 3.3E-07 56.8 9.9 48 273-326 124-171 (410)
337 1ryi_A Glycine oxidase; flavop 96.5 0.013 4.5E-07 55.0 10.6 45 270-325 176-220 (382)
338 2qa1_A PGAE, polyketide oxygen 96.5 0.015 5E-07 57.2 11.2 137 152-325 11-166 (500)
339 2uzz_A N-methyl-L-tryptophan o 96.4 0.0055 1.9E-07 57.4 7.4 58 270-338 161-218 (372)
340 3nyc_A D-arginine dehydrogenas 96.4 0.01 3.4E-07 55.6 9.1 44 270-324 166-209 (381)
341 3qj4_A Renalase; FAD/NAD(P)-bi 96.4 0.015 5.1E-07 53.9 10.2 40 272-321 123-162 (342)
342 3cp8_A TRNA uridine 5-carboxym 96.4 0.022 7.5E-07 57.4 11.8 46 271-326 131-176 (641)
343 3qvp_A Glucose oxidase; oxidor 96.3 0.0029 1E-07 63.3 5.0 53 269-325 238-294 (583)
344 1y56_A Hypothetical protein PH 96.3 0.013 4.3E-07 57.6 9.1 114 153-327 109-222 (493)
345 2pyx_A Tryptophan halogenase; 96.2 0.011 3.7E-07 58.5 8.5 47 271-326 189-235 (526)
346 1n4w_A CHOD, cholesterol oxida 96.2 0.0039 1.3E-07 61.5 4.9 37 12-50 4-40 (504)
347 2gag_A Heterotetrameric sarcos 96.2 0.005 1.7E-07 65.6 6.0 80 13-113 284-383 (965)
348 1vg0_A RAB proteins geranylger 96.2 0.0056 1.9E-07 61.7 6.0 42 12-55 7-48 (650)
349 3q9t_A Choline dehydrogenase a 96.2 0.0034 1.2E-07 62.8 4.5 36 12-49 5-41 (577)
350 3da1_A Glycerol-3-phosphate de 96.2 0.014 4.9E-07 58.2 9.0 51 270-324 182-232 (561)
351 2weu_A Tryptophan 5-halogenase 96.2 0.0053 1.8E-07 60.5 5.8 48 270-326 185-232 (511)
352 1gte_A Dihydropyrimidine dehyd 96.1 0.013 4.4E-07 62.9 9.0 34 13-48 332-366 (1025)
353 1lqt_A FPRA; NADP+ derivative, 96.1 0.024 8.2E-07 55.0 10.2 38 12-49 146-202 (456)
354 2gf3_A MSOX, monomeric sarcosi 96.1 0.01 3.6E-07 55.8 7.2 46 270-326 162-207 (389)
355 1cjc_A Protein (adrenodoxin re 96.0 0.025 8.7E-07 54.9 9.9 38 12-49 144-200 (460)
356 1coy_A Cholesterol oxidase; ox 96.0 0.0054 1.8E-07 60.5 4.9 36 12-49 10-45 (507)
357 2dkh_A 3-hydroxybenzoate hydro 96.0 0.033 1.1E-06 56.4 10.9 69 249-325 140-212 (639)
358 2e5v_A L-aspartate oxidase; ar 96.0 0.017 5.7E-07 56.4 8.3 48 270-326 131-178 (472)
359 3dfz_A SIRC, precorrin-2 dehyd 95.9 0.017 5.8E-07 50.2 7.2 35 11-47 29-63 (223)
360 4b63_A L-ornithine N5 monooxyg 95.9 0.027 9.2E-07 55.4 9.4 68 249-327 144-217 (501)
361 1ju2_A HydroxynitrIle lyase; f 95.9 0.0042 1.4E-07 61.7 3.4 35 13-50 26-60 (536)
362 1pj5_A N,N-dimethylglycine oxi 95.8 0.047 1.6E-06 57.1 11.5 46 270-325 163-208 (830)
363 3fim_B ARYL-alcohol oxidase; A 95.7 0.0041 1.4E-07 62.1 2.9 37 13-50 2-38 (566)
364 2wdq_A Succinate dehydrogenase 95.7 0.062 2.1E-06 53.9 11.3 51 270-323 155-205 (588)
365 3lk7_A UDP-N-acetylmuramoylala 95.7 0.0097 3.3E-07 57.7 5.1 76 12-113 8-84 (451)
366 2g1u_A Hypothetical protein TM 95.6 0.014 4.8E-07 47.5 5.2 35 12-48 18-52 (155)
367 2r0c_A REBC; flavin adenine di 95.5 0.17 5.7E-06 50.2 13.4 47 275-326 152-198 (549)
368 1chu_A Protein (L-aspartate ox 95.5 0.054 1.8E-06 53.7 9.7 51 271-324 152-208 (540)
369 1kf6_A Fumarate reductase flav 95.4 0.14 4.6E-06 51.5 12.6 51 270-324 146-197 (602)
370 3fwz_A Inner membrane protein 95.3 0.028 9.6E-07 44.8 6.0 34 12-47 6-39 (140)
371 1id1_A Putative potassium chan 95.3 0.025 8.6E-07 45.8 5.7 33 13-47 3-35 (153)
372 1gpe_A Protein (glucose oxidas 95.3 0.013 4.5E-07 58.8 4.8 38 12-50 23-60 (587)
373 3c4n_A Uncharacterized protein 95.1 0.016 5.5E-07 55.2 4.6 44 270-324 184-236 (405)
374 3llv_A Exopolyphosphatase-rela 95.1 0.029 1E-06 44.6 5.3 33 13-47 6-38 (141)
375 2h88_A Succinate dehydrogenase 95.0 0.19 6.3E-06 50.7 12.3 51 270-324 167-217 (621)
376 3eag_A UDP-N-acetylmuramate:L- 94.9 0.063 2.2E-06 49.5 7.9 74 12-113 3-78 (326)
377 2qcu_A Aerobic glycerol-3-phos 94.9 0.07 2.4E-06 52.3 8.7 51 270-325 161-211 (501)
378 1lss_A TRK system potassium up 94.9 0.029 1E-06 44.2 4.9 33 13-47 4-36 (140)
379 3ic5_A Putative saccharopine d 94.8 0.029 9.8E-07 42.8 4.4 33 13-47 5-38 (118)
380 2hmt_A YUAA protein; RCK, KTN, 94.4 0.047 1.6E-06 43.1 4.9 33 13-47 6-38 (144)
381 3gyx_A Adenylylsulfate reducta 94.1 0.14 4.8E-06 52.0 8.8 48 272-322 182-231 (662)
382 2bs2_A Quinol-fumarate reducta 94.0 0.16 5.5E-06 51.5 9.1 51 270-324 170-220 (660)
383 3kkj_A Amine oxidase, flavin-c 94.0 0.044 1.5E-06 47.7 4.3 33 154-207 4-36 (336)
384 1pn0_A Phenol 2-monooxygenase; 94.0 0.28 9.4E-06 49.9 10.7 20 153-172 9-28 (665)
385 3c85_A Putative glutathione-re 93.8 0.066 2.2E-06 44.7 5.0 33 13-47 39-72 (183)
386 4dio_A NAD(P) transhydrogenase 93.7 0.073 2.5E-06 50.4 5.5 35 12-48 189-223 (405)
387 2x5o_A UDP-N-acetylmuramoylala 93.6 0.058 2E-06 52.0 4.8 36 12-49 4-39 (439)
388 1pjq_A CYSG, siroheme synthase 93.6 0.12 4.2E-06 50.0 7.0 34 12-47 11-44 (457)
389 1kyq_A Met8P, siroheme biosynt 93.1 0.069 2.4E-06 47.8 4.0 34 12-47 12-45 (274)
390 3p2y_A Alanine dehydrogenase/p 93.0 0.075 2.6E-06 49.9 4.3 35 12-48 183-217 (381)
391 3l4b_C TRKA K+ channel protien 93.0 0.095 3.3E-06 45.1 4.8 31 15-47 2-32 (218)
392 4e12_A Diketoreductase; oxidor 92.6 0.14 4.8E-06 46.1 5.4 33 13-47 4-36 (283)
393 1x13_A NAD(P) transhydrogenase 92.5 0.12 4.2E-06 49.1 5.1 34 12-47 171-204 (401)
394 1l7d_A Nicotinamide nucleotide 92.4 0.15 5E-06 48.2 5.5 35 12-48 171-205 (384)
395 4dgk_A Phytoene dehydrogenase; 92.3 0.061 2.1E-06 52.5 2.8 45 270-323 233-277 (501)
396 3oj0_A Glutr, glutamyl-tRNA re 92.0 0.073 2.5E-06 42.5 2.5 33 13-47 21-53 (144)
397 2a9f_A Putative malic enzyme ( 91.8 0.14 4.6E-06 48.2 4.4 35 11-47 186-221 (398)
398 3dfz_A SIRC, precorrin-2 dehyd 91.6 0.5 1.7E-05 40.8 7.4 50 149-226 28-77 (223)
399 4ffl_A PYLC; amino acid, biosy 91.5 0.2 6.8E-06 46.7 5.3 35 13-49 1-35 (363)
400 1lld_A L-lactate dehydrogenase 91.5 0.19 6.5E-06 45.9 5.1 34 12-47 6-41 (319)
401 2raf_A Putative dinucleotide-b 91.4 0.24 8.2E-06 42.3 5.2 36 12-49 18-53 (209)
402 1f0y_A HCDH, L-3-hydroxyacyl-C 91.4 0.24 8.2E-06 44.9 5.5 33 13-47 15-47 (302)
403 1pjc_A Protein (L-alanine dehy 91.3 0.21 7.2E-06 46.7 5.2 33 13-47 167-199 (361)
404 3i83_A 2-dehydropantoate 2-red 91.3 0.21 7.1E-06 45.8 5.1 32 14-47 3-34 (320)
405 2ewd_A Lactate dehydrogenase,; 91.2 0.21 7E-06 45.8 5.0 33 13-47 4-37 (317)
406 3doj_A AT3G25530, dehydrogenas 91.2 0.23 7.8E-06 45.3 5.2 36 11-48 19-54 (310)
407 1vl6_A Malate oxidoreductase; 91.1 0.18 6.1E-06 47.2 4.4 35 11-47 190-225 (388)
408 3ghy_A Ketopantoate reductase 91.0 0.25 8.6E-06 45.6 5.4 32 14-47 4-35 (335)
409 3ado_A Lambda-crystallin; L-gu 90.9 0.25 8.7E-06 45.2 5.2 35 12-48 5-39 (319)
410 1ks9_A KPA reductase;, 2-dehyd 90.8 0.26 8.9E-06 44.1 5.2 33 15-49 2-34 (291)
411 4hv4_A UDP-N-acetylmuramate--L 90.8 0.31 1.1E-05 47.6 6.0 73 11-113 20-93 (494)
412 1bg6_A N-(1-D-carboxylethyl)-L 90.7 0.25 8.5E-06 45.8 5.1 32 14-47 5-36 (359)
413 1t2d_A LDH-P, L-lactate dehydr 90.6 0.32 1.1E-05 44.7 5.6 33 13-47 4-37 (322)
414 2vns_A Metalloreductase steap3 90.5 0.31 1E-05 41.8 5.1 34 12-47 27-60 (215)
415 2vhw_A Alanine dehydrogenase; 90.4 0.29 9.9E-06 46.0 5.2 34 12-47 167-200 (377)
416 2dpo_A L-gulonate 3-dehydrogen 90.3 0.3 1E-05 44.7 5.2 34 13-48 6-39 (319)
417 1pzg_A LDH, lactate dehydrogen 90.3 0.28 9.4E-06 45.3 4.9 33 13-47 9-42 (331)
418 2ew2_A 2-dehydropantoate 2-red 90.3 0.28 9.6E-06 44.4 5.0 32 14-47 4-35 (316)
419 2eez_A Alanine dehydrogenase; 90.3 0.3 1E-05 45.8 5.2 34 12-47 165-198 (369)
420 3hn2_A 2-dehydropantoate 2-red 90.2 0.24 8.3E-06 45.2 4.4 32 14-47 3-34 (312)
421 1jw9_B Molybdopterin biosynthe 90.1 0.25 8.5E-06 43.6 4.2 34 13-48 31-65 (249)
422 3phh_A Shikimate dehydrogenase 90.1 0.37 1.3E-05 43.0 5.3 33 13-47 118-150 (269)
423 2hjr_A Malate dehydrogenase; m 89.9 0.37 1.3E-05 44.3 5.5 33 13-47 14-47 (328)
424 4gde_A UDP-galactopyranose mut 89.8 0.21 7.2E-06 48.6 3.9 42 268-321 232-273 (513)
425 3gpi_A NAD-dependent epimerase 89.7 0.43 1.5E-05 42.5 5.7 35 13-49 3-37 (286)
426 1nyt_A Shikimate 5-dehydrogena 89.6 0.39 1.3E-05 42.8 5.2 34 12-47 118-151 (271)
427 3orq_A N5-carboxyaminoimidazol 89.5 0.48 1.6E-05 44.4 6.0 37 11-49 10-46 (377)
428 3q2o_A Phosphoribosylaminoimid 89.5 0.47 1.6E-05 44.7 5.9 37 11-49 12-48 (389)
429 2y0c_A BCEC, UDP-glucose dehyd 89.4 0.36 1.2E-05 47.0 5.1 35 12-48 7-41 (478)
430 3nks_A Protoporphyrinogen oxid 89.4 0.31 1.1E-05 46.9 4.7 43 270-322 246-288 (477)
431 1y6j_A L-lactate dehydrogenase 89.3 0.4 1.4E-05 43.9 5.1 34 12-47 6-41 (318)
432 3qha_A Putative oxidoreductase 89.2 0.33 1.1E-05 43.9 4.5 35 13-49 15-49 (296)
433 3dtt_A NADP oxidoreductase; st 89.2 0.42 1.4E-05 41.8 5.1 36 11-48 17-52 (245)
434 2v6b_A L-LDH, L-lactate dehydr 89.1 0.39 1.3E-05 43.7 4.9 31 15-47 2-34 (304)
435 3k6j_A Protein F01G10.3, confi 89.1 0.5 1.7E-05 45.6 5.8 35 12-48 53-87 (460)
436 3l9w_A Glutathione-regulated p 89.1 0.42 1.5E-05 45.5 5.3 34 13-48 4-37 (413)
437 3gg2_A Sugar dehydrogenase, UD 89.1 0.37 1.3E-05 46.4 5.0 34 14-49 3-36 (450)
438 3g79_A NDP-N-acetyl-D-galactos 89.0 0.37 1.2E-05 46.8 4.8 36 12-49 17-54 (478)
439 3pef_A 6-phosphogluconate dehy 89.0 0.4 1.4E-05 43.0 4.9 33 14-48 2-34 (287)
440 3tl2_A Malate dehydrogenase; c 89.0 0.44 1.5E-05 43.6 5.2 34 12-47 7-41 (315)
441 3k96_A Glycerol-3-phosphate de 89.0 0.48 1.6E-05 44.1 5.5 33 13-47 29-61 (356)
442 2egg_A AROE, shikimate 5-dehyd 89.0 0.43 1.5E-05 43.3 5.0 34 12-47 140-174 (297)
443 3g0o_A 3-hydroxyisobutyrate de 89.0 0.44 1.5E-05 43.2 5.1 33 13-47 7-39 (303)
444 3gvi_A Malate dehydrogenase; N 89.0 0.48 1.7E-05 43.5 5.4 34 12-47 6-40 (324)
445 3nrn_A Uncharacterized protein 88.8 0.32 1.1E-05 46.2 4.2 42 270-323 201-242 (421)
446 3p7m_A Malate dehydrogenase; p 88.8 0.54 1.8E-05 43.1 5.6 34 12-47 4-38 (321)
447 2iid_A L-amino-acid oxidase; f 88.7 0.3 1E-05 47.5 4.1 21 152-172 33-53 (498)
448 3d4o_A Dipicolinate synthase s 88.7 0.47 1.6E-05 42.8 5.1 35 11-47 153-187 (293)
449 2rir_A Dipicolinate synthase, 88.6 0.47 1.6E-05 43.0 5.0 35 11-47 155-189 (300)
450 3gvp_A Adenosylhomocysteinase 88.6 0.4 1.4E-05 45.6 4.6 36 11-48 218-253 (435)
451 1zcj_A Peroxisomal bifunctiona 88.6 0.48 1.6E-05 45.8 5.4 34 12-47 36-69 (463)
452 3g17_A Similar to 2-dehydropan 88.4 0.34 1.2E-05 43.7 4.0 33 14-48 3-35 (294)
453 3ka7_A Oxidoreductase; structu 88.4 0.32 1.1E-05 46.0 4.0 44 270-323 208-251 (425)
454 4a7p_A UDP-glucose dehydrogena 88.4 0.46 1.6E-05 45.7 5.0 37 12-50 7-43 (446)
455 2pv7_A T-protein [includes: ch 88.3 0.74 2.5E-05 41.6 6.1 34 13-48 21-55 (298)
456 1z82_A Glycerol-3-phosphate de 88.3 0.49 1.7E-05 43.5 5.1 34 12-47 13-46 (335)
457 1guz_A Malate dehydrogenase; o 88.1 0.56 1.9E-05 42.7 5.3 33 15-47 2-34 (310)
458 3pqe_A L-LDH, L-lactate dehydr 88.1 0.48 1.6E-05 43.5 4.8 34 12-47 4-39 (326)
459 3vtf_A UDP-glucose 6-dehydroge 88.1 0.41 1.4E-05 45.9 4.4 48 12-61 20-67 (444)
460 4huj_A Uncharacterized protein 88.0 0.32 1.1E-05 41.8 3.4 33 13-47 23-56 (220)
461 1yj8_A Glycerol-3-phosphate de 87.9 0.2 6.8E-06 47.0 2.1 35 13-49 21-62 (375)
462 2uyy_A N-PAC protein; long-cha 87.8 0.65 2.2E-05 42.2 5.5 33 13-47 30-62 (316)
463 1p77_A Shikimate 5-dehydrogena 87.7 0.42 1.4E-05 42.6 4.1 34 12-47 118-151 (272)
464 3l6d_A Putative oxidoreductase 87.5 0.75 2.6E-05 41.7 5.7 35 12-48 8-42 (306)
465 4dll_A 2-hydroxy-3-oxopropiona 87.4 0.52 1.8E-05 43.1 4.6 33 13-47 31-63 (320)
466 2h78_A Hibadh, 3-hydroxyisobut 87.4 0.48 1.6E-05 42.8 4.3 33 13-47 3-35 (302)
467 4aj2_A L-lactate dehydrogenase 87.4 0.7 2.4E-05 42.5 5.4 35 11-47 17-53 (331)
468 2g1u_A Hypothetical protein TM 87.4 0.61 2.1E-05 37.5 4.5 38 148-206 15-52 (155)
469 1kyq_A Met8P, siroheme biosynt 87.4 0.58 2E-05 41.8 4.7 37 149-206 10-46 (274)
470 3ihm_A Styrene monooxygenase A 87.3 0.36 1.2E-05 46.2 3.6 33 153-206 23-55 (430)
471 3pdu_A 3-hydroxyisobutyrate de 87.3 0.4 1.4E-05 43.0 3.7 33 14-48 2-34 (287)
472 3hwr_A 2-dehydropantoate 2-red 87.3 0.59 2E-05 42.7 4.9 33 12-47 18-50 (318)
473 3c4a_A Probable tryptophan hyd 87.3 0.35 1.2E-05 45.2 3.5 35 153-208 1-37 (381)
474 3ond_A Adenosylhomocysteinase; 87.3 0.63 2.2E-05 45.0 5.2 35 11-47 263-297 (488)
475 2i6t_A Ubiquitin-conjugating e 87.3 0.51 1.7E-05 42.9 4.4 35 12-48 13-49 (303)
476 2b9w_A Putative aminooxidase; 87.3 0.41 1.4E-05 45.4 3.9 21 152-172 6-26 (424)
477 4e21_A 6-phosphogluconate dehy 87.2 0.64 2.2E-05 43.3 5.1 35 12-48 21-55 (358)
478 3lk7_A UDP-N-acetylmuramoylala 87.2 0.82 2.8E-05 44.0 6.1 36 150-206 7-42 (451)
479 3nkl_A UDP-D-quinovosamine 4-d 87.1 0.66 2.3E-05 36.5 4.5 35 12-47 3-38 (141)
480 3jyo_A Quinate/shikimate dehyd 87.1 0.71 2.4E-05 41.5 5.2 34 12-47 126-160 (283)
481 3ic5_A Putative saccharopine d 87.0 0.74 2.5E-05 34.5 4.6 34 152-205 5-38 (118)
482 3ius_A Uncharacterized conserv 87.0 0.56 1.9E-05 41.7 4.5 33 13-47 5-37 (286)
483 1mv8_A GMD, GDP-mannose 6-dehy 87.0 0.47 1.6E-05 45.5 4.2 32 15-48 2-33 (436)
484 3don_A Shikimate dehydrogenase 86.9 0.63 2.2E-05 41.7 4.7 35 12-48 116-151 (277)
485 1hdo_A Biliverdin IX beta redu 86.8 0.8 2.7E-05 38.2 5.2 33 14-48 4-37 (206)
486 3ldh_A Lactate dehydrogenase; 86.8 0.81 2.8E-05 42.0 5.4 34 12-47 20-55 (330)
487 3tnl_A Shikimate dehydrogenase 86.7 0.71 2.4E-05 42.2 5.0 34 12-47 153-187 (315)
488 3pl8_A Pyranose 2-oxidase; sub 86.7 0.52 1.8E-05 47.5 4.5 40 13-54 46-85 (623)
489 1rsg_A FMS1 protein; FAD bindi 86.7 0.46 1.6E-05 46.5 4.0 21 152-172 8-28 (516)
490 3vku_A L-LDH, L-lactate dehydr 86.7 0.64 2.2E-05 42.7 4.7 34 12-47 8-43 (326)
491 3g5s_A Methylenetetrahydrofola 86.6 0.5 1.7E-05 44.7 4.0 33 153-206 2-34 (443)
492 3ce6_A Adenosylhomocysteinase; 86.6 0.71 2.4E-05 44.9 5.2 35 11-47 272-306 (494)
493 2aef_A Calcium-gated potassium 86.6 0.31 1.1E-05 42.2 2.5 33 12-47 8-40 (234)
494 1jay_A Coenzyme F420H2:NADP+ o 86.6 0.7 2.4E-05 39.1 4.7 31 15-47 2-33 (212)
495 3dhn_A NAD-dependent epimerase 86.6 0.65 2.2E-05 39.6 4.6 34 13-48 4-38 (227)
496 3fi9_A Malate dehydrogenase; s 86.6 0.91 3.1E-05 42.0 5.7 34 12-47 7-43 (343)
497 3cky_A 2-hydroxymethyl glutara 86.6 0.57 1.9E-05 42.2 4.3 33 13-47 4-36 (301)
498 3k5i_A Phosphoribosyl-aminoimi 86.5 0.64 2.2E-05 44.0 4.8 36 8-45 19-54 (403)
499 1ur5_A Malate dehydrogenase; o 86.4 0.81 2.8E-05 41.7 5.2 32 14-47 3-35 (309)
500 2o3j_A UDP-glucose 6-dehydroge 86.4 0.55 1.9E-05 45.7 4.3 36 13-48 9-44 (481)
No 1
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=100.00 E-value=3.2e-50 Score=396.56 Aligned_cols=375 Identities=51% Similarity=0.877 Sum_probs=300.5
Q ss_pred CCCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCCCCCCcchhHHHHHHHHhhcCCCcEEEceEEEE
Q psy4525 11 QLKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTKTGDNPRVNFYGNICLG 90 (388)
Q Consensus 11 ~~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~ 90 (388)
..+++|+||||||||+++|..|++..++.+|+|||+.+.+||.|++++.|.++..+++..++.+++++.+++++.++.++
T Consensus 4 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~ 83 (460)
T 1cjc_A 4 EQTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLVRFGVAPDHPEVKNVINTFTQTARSDRCAFYGNVEVG 83 (460)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHHHHTSCTTCGGGGGHHHHHHHHHTSTTEEEEBSCCBT
T ss_pred CCCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCceeecccCCCCccHHHHHHHHHHHHHhCCcEEEeeeEEe
Confidence 34689999999999999999999942339999999999999999999988888888888888899999999999887775
Q ss_pred EEeeecccccccCEEEEeeCCCCCCCCCCCCCCCCCeeecccccccccCCCCccccCcCCCCCeEEEEcCChHHHHHHHH
Q psy4525 91 QDISLGDLTNAYHAVVLTYGADNDKKLNIPGEDGKNIISARSFVGWYNGLPEDASLDLSLDCEEATILGQGNVAMDVARI 170 (388)
Q Consensus 91 ~~~~~~~~~~~yd~lvlAtG~~~~~~~~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVIGgG~sg~e~a~~ 170 (388)
.+++..+....||+||+|||+.+++.+++||.+.++++++.++..+++.++++........+++|+|||+|++|+|+|..
T Consensus 84 ~~V~~~~~~~~~d~lVlAtGs~~~~~~~ipG~~~~gv~~~~~~~~~~~~~~d~~~~~~~~~~~~vvVIGgG~~g~e~A~~ 163 (460)
T 1cjc_A 84 RDVTVQELQDAYHAVVLSYGAEDHQALDIPGEELPGVFSARAFVGWYNGLPENRELAPDLSCDTAVILGQGNVALDVARI 163 (460)
T ss_dssp TTBCHHHHHHHSSEEEECCCCCEECCCCCTTTTSTTEEEHHHHHHHHTTCGGGTTCCCCTTSSEEEEESCSHHHHHHHHH
T ss_pred eEEEeccceEEcCEEEEecCcCCCCCCCCCCCCCCcEEEHHHHHHHhhcCccccccccCCCCCEEEEECCCHHHHHHHHH
Confidence 44555444458999999999986567899999889999999999888887766543323368999999999999999999
Q ss_pred hccCCcccccccCchhHHHhhhcCCCcEEEEEeecCcccccCCHHHHHHHhcCCCceEEecccccccchhhhccccchhh
Q psy4525 171 LLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRGALQVAFTIKEFREMTKLPHVQTVFRNEQLCGVHEASATLARPRK 250 (388)
Q Consensus 171 L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~~~~~~~~~~el~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 250 (388)
|+...++|.+|||+.++++.+++.+.++|+++.|+++++.+|+++|+++|.++|.++..+++++++........+++..+
T Consensus 164 L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~~~~~ft~~el~~l~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (460)
T 1cjc_A 164 LLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGPLQVAFTIKELREMIQLPGTRPMLDPADFLGLQDRIKEAARPRK 243 (460)
T ss_dssp HHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCGGGCCCCHHHHHHHHTCTTEEEECCGGGGTTHHHHTTTSCHHHH
T ss_pred HhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCChHhhccCHHHHHHhhcCCCceeEechhhhcchhhhhhhccHHHH
Confidence 99999999999999999999999998899999999999999999999999999998888777765432222223455556
Q ss_pred HHHHHHHhhCCCC----C--CCCCCceeEEEEecCcceeeeeCCCC-ceeEEEEccCc---------cccCCceeEEecc
Q psy4525 251 RLTELILKTSNPD----E--SKSNCSKYFRPIFLRSPTEFKLNDNG-AITGINFANQQ---------ALVTEDTELIPSG 314 (388)
Q Consensus 251 ~~~~~~~~~~~~~----~--~~~~~~~gv~~~~~~~~~~i~~~~~~-~v~~v~~~~~~---------~~~~~~~~~l~~D 314 (388)
++.+.+.+.+... . ......+||.++++..++++..++++ ++.++++.... .+.+++.++++||
T Consensus 244 ~~~~~l~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d 323 (460)
T 1cjc_A 244 RLMELLLRTATEKPGVEEAARRASASRAWGLRFFRSPQQVLPSPDGRRAAGIRLAVTRLEGIGEATRAVPTGDVEDLPCG 323 (460)
T ss_dssp HHHHHHHHHHHSCCCHHHHHHHHTCSEEEEEECSEEEEEEEECTTSSSEEEEEEEEEEEESSGGGCEEEEEEEEEEEECS
T ss_pred HHHHHHHHHHHhccccccccCCCCCCceEEEECCCChheEEcCCCCceEEEEEEEEEEEccccCCCcccCCCceEEEEcC
Confidence 6666555443210 0 00012489999999999999875435 77777765311 1113445789999
Q ss_pred eEEEccccCCccCCCCC-cccCCCccc-------------------------------------------------c---
Q psy4525 315 IAFRSIGYQSRCVDSDI-PFNEKSCTV-------------------------------------------------I--- 341 (388)
Q Consensus 315 ~Vi~a~G~~p~~~~~~l-~~~~~~gi~-------------------------------------------------l--- 341 (388)
+||+|+|++|+++ .++ ++++++|++ +
T Consensus 324 ~Vi~a~G~~p~~l-~gl~~~d~~g~i~vn~~~rt~~~p~vya~Gd~~~g~~~~i~~a~~~g~~aa~~i~~~l~~~~~~~~ 402 (460)
T 1cjc_A 324 LVLSSIGYKSRPI-DPSVPFDPKLGVVPNMEGRVVDVPGLYCSGWVKRGPTGVITTTMTDSFLTGQILLQDLKAGHLPSG 402 (460)
T ss_dssp EEEECCCEECCCC-CTTSCCBTTTTBCCEETTEETTCTTEEECTHHHHCTTCCHHHHHHHHHHHHHHHHHHHHHTCSCCS
T ss_pred EEEECCCCCCCCC-CCCcccccCCCeeECCCCcCcCCCCEEEEEeCCcCCCccHHHHHHHHHHHHHHHHHHHHhCcCCCC
Confidence 9999999999986 478 888666654 1
Q ss_pred ------------CCCCCCeecchhhHHhHHHHHHccccCCCCccccCCHHHHHhhhc
Q psy4525 342 ------------PKEGVPVVTWEGWKAIDKEETERGKLKGKPREKIISIEEMISVSG 386 (388)
Q Consensus 342 ------------~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~ 386 (388)
..++..+++|++|++||++|+++|+..||+|.||++++|||++++
T Consensus 403 ~~~~~~~~~~~l~~~g~~~~~~~~w~~id~~e~~~g~~~g~~r~k~~~~~~m~~~~~ 459 (460)
T 1cjc_A 403 PRPGSAFIKALLDSRGVWPVSFSDWEKLDAEEVSRGQASGKPREKLLDPQEMLRLLG 459 (460)
T ss_dssp CCCTHHHHHHHHHHHTCCCBCHHHHHHHHHHHHHHHHHHTSSCCCCCCHHHHHHHTT
T ss_pred CCCchhHHHHHHHHcCCCeecHHHHHHHHHHHHHhhhhcCCCceeeCCHHHHHHHhc
Confidence 123556789999999999999999999999999999999999876
No 2
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=100.00 E-value=1.1e-49 Score=392.36 Aligned_cols=368 Identities=38% Similarity=0.627 Sum_probs=298.0
Q ss_pred CCcEEEECccHHHHHHHHHHHh-hCC----CCcEEEEcCCCCCCCceeeCCCCCCcchhHHHHHHHHhhcCCCcEEEceE
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILK-LLP----QSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTKTGDNPRVNFYGNI 87 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~-~~~----g~~v~lie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~ 87 (388)
+++|+||||||||+++|..|++ ..+ +.+|+|||+.+.+||.|+|++.|.+...+++..++.+++.+.+++++.++
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~~gv~p~~~~~~~~~~~~~~~~~~~~v~~~~~v 82 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVRSGVAPDHPKIKSISKQFEKTAEDPRFRFFGNV 82 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHHHTSCTTCTGGGGGHHHHHHHHTSTTEEEEESC
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCccccccCCCCCCHHHHHHHHHHHHhcCCCEEEeeE
Confidence 5799999999999999999988 534 89999999999999999999989888888888889899999999998886
Q ss_pred EEEEEeeecccccccCEEEEeeCCCCCCCCCCCCCCCCCeeecccccccccCCCCc-cccCcCCCCCeEEEEcCChHHHH
Q psy4525 88 CLGQDISLGDLTNAYHAVVLTYGADNDKKLNIPGEDGKNIISARSFVGWYNGLPED-ASLDLSLDCEEATILGQGNVAMD 166 (388)
Q Consensus 88 ~v~~~~~~~~~~~~yd~lvlAtG~~~~~~~~i~g~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~vvVIGgG~sg~e 166 (388)
.++.++++++....||+||+|||+.+++.+++||.+.++++++.++..++++++++ .... ...+++|+|||+|++|+|
T Consensus 83 ~v~~~v~~~~~~~~~d~lViAtG~~~~~~~~ipG~~~~gv~~~~~~~~~~~~~~d~~~~~~-~~~~~~vvVIG~G~~g~e 161 (456)
T 1lqt_A 83 VVGEHVQPGELSERYDAVIYAVGAQSDRMLNIPGEDLPGSIAAVDFVGWYNAHPHFEQVSP-DLSGARAVVIGNGNVALD 161 (456)
T ss_dssp CBTTTBCHHHHHHHSSEEEECCCCCEECCCCCTTTTSTTEEEHHHHHHHHTTCGGGTTCCC-CCCSSEEEEECCSHHHHH
T ss_pred EECCEEEECCCeEeCCEEEEeeCCCCCCCCCCCCCCCCCcEEHHHHHhhhhcCcccccchh-hcCCCEEEEECCCHHHHH
Confidence 65444455444458999999999974467899998888999999999999888776 3222 346899999999999999
Q ss_pred HHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecCcccccCCHHHHHHHhcCCCceEEecccccc-cchhhhccc
Q psy4525 167 VARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRGALQVAFTIKEFREMTKLPHVQTVFRNEQLC-GVHEASATL 245 (388)
Q Consensus 167 ~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~~~~~~~~~~el~~l~~~~~~~~~~~~~~~~-~~~~~~~~l 245 (388)
+|..|+...++|..+|++.+.++.+++.+.++|+++.|+++++..|+++|+++|.++|+++..++++++. ........+
T Consensus 162 ~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~~~~~f~~~elrel~~lp~~~~~~~~~~~~~~~~~~~~~~ 241 (456)
T 1lqt_A 162 VARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPLQAAFTTLELRELADLDGVDVVIDPAELDGITDEDAAAV 241 (456)
T ss_dssp HHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGGGCCCCHHHHHHGGGCTTEEEECCGGGGTTCCHHHHHHH
T ss_pred HHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCChhhhccChHHHHHhhcCCCceeeeChHHhccchhhhhhhc
Confidence 9999998888899999999999999988888999999999999999999999999999999888877763 111122334
Q ss_pred cchhhHHHHHHHhhCCCCCCCCCCceeEEEEecCcceeeeeCCCCceeEEEEccCc----------cccCCceeEEecce
Q psy4525 246 ARPRKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTEFKLNDNGAITGINFANQQ----------ALVTEDTELIPSGI 315 (388)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~----------~~~~~~~~~l~~D~ 315 (388)
++.++++.+.+.+.+..... ...+||+++++..++++..+ +++.++++.+.. .+.+++.++++||+
T Consensus 242 ~~~~~~~~~~l~~~~~~~~~--~~~~gv~i~~~~~~~~i~~~--~~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~d~ 317 (456)
T 1lqt_A 242 GKVCKQNIKVLRGYADREPR--PGHRRMVFRFLTSPIEIKGK--RKVERIVLGRNELVSDGSGRVAAKDTGEREELPAQL 317 (456)
T ss_dssp CHHHHHHHHHHHHHHTCC-C--TTSEEEEEECSEEEEEEECS--SSCCEEEEEEEEEEECSSSSEEEEEEEEEEEEECSE
T ss_pred cHHHHHHHHHHHHHhhcCCC--CCCceEEEEeCCCCeEEecC--CcEeEEEEEEEEecCCCcccccccCCCceEEEEcCE
Confidence 56666666777665432111 12389999999999999853 566667665310 11233346899999
Q ss_pred EEEccccCCccCCCCCcccCCCccc-------------------------------------------------c-----
Q psy4525 316 AFRSIGYQSRCVDSDIPFNEKSCTV-------------------------------------------------I----- 341 (388)
Q Consensus 316 Vi~a~G~~p~~~~~~l~~~~~~gi~-------------------------------------------------l----- 341 (388)
||+|+|++|+++ .+++++.+++++ +
T Consensus 318 vi~a~G~~p~~l-~gl~~d~~g~i~vn~~~rvt~~pgvya~GD~~~gp~~~i~~a~~~g~~~a~~i~~~l~~~~l~~~~~ 396 (456)
T 1lqt_A 318 VVRSVGYRGVPT-PGLPFDDQSGTIPNVGGRINGSPNEYVVGWIKRGPTGVIGTNKKDAQDTVDTLIKNLGNAKEGAECK 396 (456)
T ss_dssp EEECSCEECCCC-TTSCCBTTTTBCCEETTEETTCSSEEECTHHHHCSCSCTTHHHHHHHHHHHHHHHHHHHHHHTTCSC
T ss_pred EEEccccccCCC-CCCcccCCCCeeECCCCcCCCCCCEEEEeccCCCCchhHHHHHHHHHHHHHHHHHHHHhCccccccc
Confidence 999999999986 377777555543 2
Q ss_pred --------------CCCCCCeecchhhHHhHHHHHHccccCCCCccccCCHHHHHhhhc
Q psy4525 342 --------------PKEGVPVVTWEGWKAIDKEETERGKLKGKPREKIISIEEMISVSG 386 (388)
Q Consensus 342 --------------~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~ 386 (388)
..++..+++|++|++||++|+++|+..||+|.||++++|||++++
T Consensus 397 ~~~~~~~~~~~~~l~~~~~~~~~~~~w~~id~~e~~~g~~~g~~r~k~~~~~~m~~~~~ 455 (456)
T 1lqt_A 397 SFPEDHADQVADWLAARQPKLVTSAHWQVIDAFERAAGEPHGRPRVKLASLAELLRIGL 455 (456)
T ss_dssp CC--CHHHHHHHHHHHHCTTCEEHHHHHHHHHHHHHHHGGGTSSCCCCCSHHHHHHHHC
T ss_pred CCCCCchHHHHHHHHHcCCCeecHHHHHHHHHHHHHhhhhcCCCceeeCCHHHHHHHhc
Confidence 135667899999999999999999999999999999999999875
No 3
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=99.97 E-value=2.8e-32 Score=268.02 Aligned_cols=276 Identities=21% Similarity=0.310 Sum_probs=200.1
Q ss_pred CCCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCCCCCCcchhHHHHHHHHhhcCCCcEEEceEEEE
Q psy4525 11 QLKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTKTGDNPRVNFYGNICLG 90 (388)
Q Consensus 11 ~~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~ 90 (388)
...++|+||||||||+++|..|++ .|++|+|||+.+.+||.++|++ |.+...+++..+..+++++.+++|+.++.++
T Consensus 120 ~~~~~V~IIGgGpAGl~aA~~L~~--~G~~V~v~e~~~~~GG~l~~gi-p~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~ 196 (456)
T 2vdc_G 120 ELGLSVGVIGAGPAGLAAAEELRA--KGYEVHVYDRYDRMGGLLVYGI-PGFKLEKSVVERRVKLLADAGVIYHPNFEVG 196 (456)
T ss_dssp SCCCCEEEECCSHHHHHHHHHHHH--HTCCEEEECSSSSCSTHHHHTS-CTTTSCHHHHHHHHHHHHHTTCEEETTCCBT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHH--CCCeEEEEeccCCCCCeeeecC-CCccCCHHHHHHHHHHHHHCCcEEEeCCEec
Confidence 356899999999999999999999 7999999999999999999998 7777777788888888888999999998776
Q ss_pred EEeeecccccccCEEEEeeCCCCCCCCCCCCCCCCCeeecccccccccC--CCC--cccc--CcCCCCCeEEEEcCChHH
Q psy4525 91 QDISLGDLTNAYHAVVLTYGADNDKKLNIPGEDGKNIISARSFVGWYNG--LPE--DASL--DLSLDCEEATILGQGNVA 164 (388)
Q Consensus 91 ~~~~~~~~~~~yd~lvlAtG~~~~~~~~i~g~~~~~v~~~~~~~~~~~~--~~~--~~~~--~~~~~~~~vvVIGgG~sg 164 (388)
.+++.++....||+||+|||+..++.+++||.+.++++++.+|+...+. ... .... .....+++|+|||||++|
T Consensus 197 ~~v~~~~~~~~~d~vvlAtG~~~~~~~~ipG~~~~gv~~a~~~l~~~~~~~~~~~~~~~~~g~~~~~gk~VvVIGgG~~a 276 (456)
T 2vdc_G 197 RDASLPELRRKHVAVLVATGVYKARDIKAPGSGLGNIVAALDYLTTSNKVSLGDTVEAYENGSLNAAGKHVVVLGGGDTA 276 (456)
T ss_dssp TTBCHHHHHSSCSEEEECCCCCEECCTTCSCCTTTTEEEHHHHHHHHHHHHCTTTCSSCCTTCSCCCCSEEEEECSSHHH
T ss_pred cEEEhhHhHhhCCEEEEecCCCCCCCCCCCCCcCCCcEEHHHHHHHhhhhhcccccccccccccccCCCEEEEECCChhH
Confidence 5555555555799999999997556789999988999998887643211 000 0000 022468999999999999
Q ss_pred HHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecCcccccCCHHHHHHHhcCCCceEEecccccccchhhhcc
Q psy4525 165 MDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRGALQVAFTIKEFREMTKLPHVQTVFRNEQLCGVHEASAT 244 (388)
Q Consensus 165 ~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~~~~~~~~~~el~~l~~~~~~~~~~~~~~~~~~~~~~~~ 244 (388)
+|+|..+. +.++++|++++|++....+....++.
T Consensus 277 ~d~A~~~~--------------------r~Ga~~Vtiv~r~~~~~~p~~~~e~~-------------------------- 310 (456)
T 2vdc_G 277 MDCVRTAI--------------------RQGATSVKCLYRRDRKNMPGSQREVA-------------------------- 310 (456)
T ss_dssp HHHHHHHH--------------------HTTCSEEEEECSSCSTTCSSCHHHHH--------------------------
T ss_pred HHHHHHHH--------------------HcCCCEEEEEEeCCccCCCCCHHHHH--------------------------
Confidence 99999665 35667899999998654443332221
Q ss_pred ccchhhHHHHHHHhhCCCCCCCCCCceeEEEEecCcceeeeeCCCCceeEEEEc---------cCcc--c-cCCceeEEe
Q psy4525 245 LARPRKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTEFKLNDNGAITGINFA---------NQQA--L-VTEDTELIP 312 (388)
Q Consensus 245 l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~v~~v~~~---------~~~~--~-~~~~~~~l~ 312 (388)
.+ .+.||+++++..++++.. ++++.++++. +++. + ..++.++++
T Consensus 311 ----------~~------------~~~Gv~~~~~~~~~~i~~--~g~v~~v~~~~~~~~~~d~~G~~~~~~~~g~~~~i~ 366 (456)
T 2vdc_G 311 ----------HA------------EEEGVEFIWQAAPEGFTG--DTVVTGVRAVRIHLGVADATGRQTPQVIEGSEFTVQ 366 (456)
T ss_dssp ----------HH------------HHTTCEEECCSSSCCEEE--EEEEETTEEEEEEEEEEEECTTCCEEEEEEEEEEEE
T ss_pred ----------HH------------HHCCCEEEeCCCceEEeC--CCcEEEEEEEEEEecccCCcCCccccccCCcEEEEE
Confidence 11 157899999999999985 3555444332 1110 0 134557899
Q ss_pred cceEEEccccCCccC-----CCCCcccCCCccccCCCCCCeecchhhHHhHH
Q psy4525 313 SGIAFRSIGYQSRCV-----DSDIPFNEKSCTVIPKEGVPVVTWEGWKAIDK 359 (388)
Q Consensus 313 ~D~Vi~a~G~~p~~~-----~~~l~~~~~~gi~l~~~~~~~~~~~~w~~~~~ 359 (388)
||.||+|+|++|+.. ..++.+++++.+.+|+.....-..+.|...|+
T Consensus 367 aD~Vi~A~G~~p~~~~~~l~~~gl~~~~~G~i~vd~~~~~Ts~~~VfA~GD~ 418 (456)
T 2vdc_G 367 ADLVIKALGFEPEDLPNAFDEPELKVTRWGTLLVDHRTKMTNMDGVFAAGDI 418 (456)
T ss_dssp CSEEEECSCEECCCHHHHHHSTTSCBCTTSSBCCCTTTCBCSSTTEEECGGG
T ss_pred CCEEEECCCCCCCcchhhcccCCeeECCCCCEEECCCCCcCCCCCEEEeccc
Confidence 999999999999862 24677777677778765222222344555553
No 4
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=99.95 E-value=3.6e-27 Score=220.56 Aligned_cols=262 Identities=16% Similarity=0.176 Sum_probs=169.2
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCC----CCCceee-----CC--CCCCcchhHHHHHHHHhhcCCC
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPV----PFGLVRY-----GV--APDHPEVKNVINTFTKTGDNPR 80 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~----~gg~~~~-----g~--~p~~~~~~~~~~~~~~~~~~~~ 80 (388)
..+||+||||||||++||..+++ .|++|+|||+... ++|.+.. .. .|......++..++.+.+.+.+
T Consensus 3 ~~yDvvIIG~GpAGl~AA~~la~--~g~~v~liE~~~~gg~~~~G~~~~~~~i~~~~g~~~~i~~~~l~~~~~~~~~~~~ 80 (314)
T 4a5l_A 3 NIHDVVIIGSGPAAHTAAIYLGR--SSLKPVMYEGFMAGGVAAGGQLTTTTIIENFPGFPNGIDGNELMMNMRTQSEKYG 80 (314)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHH--TTCCCEEECCSSGGGCCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHTT
T ss_pred CCCcEEEECCCHHHHHHHHHHHH--CCCCEEEEecCCCCCcccCCCcCChHHhhhccCCcccCCHHHHHHHHHHHHhhcC
Confidence 35899999999999999999999 8999999998742 3333211 11 0233356778888888888888
Q ss_pred cEEEceEEEEEE-------eeeccc-ccccCEEEEeeCCCCCCCCCCCCCCCCCeeecccccccccCCCCccccCcCCCC
Q psy4525 81 VNFYGNICLGQD-------ISLGDL-TNAYHAVVLTYGADNDKKLNIPGEDGKNIISARSFVGWYNGLPEDASLDLSLDC 152 (388)
Q Consensus 81 i~~~~~~~v~~~-------~~~~~~-~~~yd~lvlAtG~~~~~~~~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (388)
+.+......... +...+. ...||+||+|||+.+ +.+++||.+........... .+........+
T Consensus 81 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~liiATG~~~-~~~~ipG~~~~~~~~~~~~~-------~~~~~~~~~~~ 152 (314)
T 4a5l_A 81 TTIITETIDHVDFSTQPFKLFTEEGKEVLTKSVIIATGATA-KRMHVPGEDKYWQNGVSACA-------ICDGAVPIFRN 152 (314)
T ss_dssp CEEECCCEEEEECSSSSEEEEETTCCEEEEEEEEECCCEEE-CCCCCTTHHHHBTTTEESCH-------HHHTTSGGGTT
T ss_pred cEEEEeEEEEeecCCCceEEEECCCeEEEEeEEEEcccccc-cccCCCccccccccceeeeh-------hhhhhhhhcCC
Confidence 887766544321 222222 347999999999988 68899986532111100110 11111223457
Q ss_pred CeEEEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecCcccccCCHHHHHHHhcCCCceEEecc
Q psy4525 153 EEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRGALQVAFTIKEFREMTKLPHVQTVFRN 232 (388)
Q Consensus 153 ~~vvVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~~~~~~~~~~el~~l~~~~~~~~~~~~ 232 (388)
++++|||+|++|+|+|..|+ ....+||+++|....... ..+
T Consensus 153 ~~vvViGgG~ig~e~A~~l~---------------------~~G~~Vt~v~~~~~~~~~---~~~--------------- 193 (314)
T 4a5l_A 153 KVLMVVGGGDAAMEEALHLT---------------------KYGSKVIILHRRDAFRAS---KTM--------------- 193 (314)
T ss_dssp SEEEEECSSHHHHHHHHHHT---------------------TTSSEEEEECSSSSCCSC---HHH---------------
T ss_pred CeEEEECCChHHHHHHHHHH---------------------HhCCeeeeeccccccccc---chh---------------
Confidence 99999999999999999886 334689999987654322 000
Q ss_pred cccccchhhhccccchhhHHHHHHHhhCCCCCCCCCCceeEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEe
Q psy4525 233 EQLCGVHEASATLARPRKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIP 312 (388)
Q Consensus 233 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~ 312 (388)
.... ....++..++...+.++... .....++++.+. .++++++++
T Consensus 194 --------------------~~~~-----------~~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~---~~~~~~~i~ 238 (314)
T 4a5l_A 194 --------------------QERV-----------LNHPKIEVIWNSELVELEGD-GDLLNGAKIHNL---VSGEYKVVP 238 (314)
T ss_dssp --------------------HHHH-----------HTCTTEEEECSEEEEEEEES-SSSEEEEEEEET---TTCCEEEEE
T ss_pred --------------------hhhh-----------hcccceeeEeeeeeEEEEee-eeccceeEEeec---ccccceeec
Confidence 0000 11456677777777777754 345556655432 367788999
Q ss_pred cceEEEccccCCccCC--CCCcccCCCccccCCCCCCeecchhhHHhHH
Q psy4525 313 SGIAFRSIGYQSRCVD--SDIPFNEKSCTVIPKEGVPVVTWEGWKAIDK 359 (388)
Q Consensus 313 ~D~Vi~a~G~~p~~~~--~~l~~~~~~gi~l~~~~~~~~~~~~w~~~~~ 359 (388)
||.|++|+|++||+.. ..+.++ .+|+++|+..... ..+.|...|+
T Consensus 239 ~d~vi~a~G~~pn~~~l~~~~~~~-~~G~iv~~~~~Ts-~pgIyA~GDv 285 (314)
T 4a5l_A 239 VAGLFYAIGHSPNSKFLGGQVKTA-DDGYILTEGPKTS-VDGVFACGDV 285 (314)
T ss_dssp CSEEEECSCEEESCGGGTTSSCBC-TTSCBCCBTTBCS-STTEEECSTT
T ss_pred cccceEecccccChhHhcccceEc-CCeeEeCCCCccC-CCCEEEEEec
Confidence 9999999999999853 234444 4577777665322 2355665554
No 5
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.94 E-value=4.8e-26 Score=214.83 Aligned_cols=262 Identities=16% Similarity=0.190 Sum_probs=176.8
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCC----CCCCCceeeCC----C---CCCcchhHHHHHHHHhhcCCC
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKL----PVPFGLVRYGV----A---PDHPEVKNVINTFTKTGDNPR 80 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~----~~~gg~~~~g~----~---p~~~~~~~~~~~~~~~~~~~~ 80 (388)
.+++|+||||||+|+++|..|++ .|++|+|||+. ..+||.|.+.. . |......++..++.+.+.+.+
T Consensus 21 ~~~~vvIIG~G~aGl~aA~~l~~--~g~~v~vie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 98 (338)
T 3itj_A 21 VHNKVTIIGSGPAAHTAAIYLAR--AEIKPILYEGMMANGIAAGGQLTTTTEIENFPGFPDGLTGSELMDRMREQSTKFG 98 (338)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH--TTCCCEEECCSSBTTBCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEECcCHHHHHHHHHHHH--CCCCEEEEecCCCCCCCcCcccccchhhcccCCCcccCCHHHHHHHHHHHHHHcC
Confidence 45899999999999999999999 89999999994 47888875421 1 333456788888888888899
Q ss_pred cEEEceEEEEEE-------eee----cccccccCEEEEeeCCCCCCCCCCCCCC---CCCeeecccccccccCCCCcccc
Q psy4525 81 VNFYGNICLGQD-------ISL----GDLTNAYHAVVLTYGADNDKKLNIPGED---GKNIISARSFVGWYNGLPEDASL 146 (388)
Q Consensus 81 i~~~~~~~v~~~-------~~~----~~~~~~yd~lvlAtG~~~~~~~~i~g~~---~~~v~~~~~~~~~~~~~~~~~~~ 146 (388)
++++.++.+..+ +.. +.....||+||+|||+.+ +.+++||.+ ...+.+...... .
T Consensus 99 v~i~~~~v~~i~~~~~~~~v~~~~~~~~~~~~~d~vvlAtG~~~-~~~~~~g~~~~~~~~~~~~~~~~~----------~ 167 (338)
T 3itj_A 99 TEIITETVSKVDLSSKPFKLWTEFNEDAEPVTTDAIILATGASA-KRMHLPGEETYWQKGISACAVCDG----------A 167 (338)
T ss_dssp CEEECSCEEEEECSSSSEEEEETTCSSSCCEEEEEEEECCCEEE-CCCCCTTHHHHBTTTEESCHHHHT----------T
T ss_pred CEEEEeEEEEEEEcCCEEEEEEEecCCCcEEEeCEEEECcCCCc-CCCCCCCchhccCccEEEchhccc----------c
Confidence 999988743322 111 112347999999999977 577888753 122222111110 0
Q ss_pred CcCCCCCeEEEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecCcccccCCHHHHHHHhcCCCc
Q psy4525 147 DLSLDCEEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRGALQVAFTIKEFREMTKLPHV 226 (388)
Q Consensus 147 ~~~~~~~~vvVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~~~~~~~~~~el~~l~~~~~~ 226 (388)
.....+++++|||+|.+|+|+|..|. ....+|+++.|.+.+...
T Consensus 168 ~~~~~~~~v~vvG~G~~g~e~a~~l~---------------------~~g~~v~~v~~~~~~~~~--------------- 211 (338)
T 3itj_A 168 VPIFRNKPLAVIGGGDSACEEAQFLT---------------------KYGSKVFMLVRKDHLRAS--------------- 211 (338)
T ss_dssp SGGGTTSEEEEECSSHHHHHHHHHHT---------------------TTSSEEEEECSSSSCCSC---------------
T ss_pred hhhcCCCEEEEECCCHHHHHHHHHHH---------------------hcCCEEEEEEcCCccCCC---------------
Confidence 11345799999999999999999886 223579999998764321
Q ss_pred eEEecccccccchhhhccccchhhHHHHHHHhhCCCCCCCCCCceeEEEEecCcceeeeeCCCCceeEEEEccCccccCC
Q psy4525 227 QTVFRNEQLCGVHEASATLARPRKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTE 306 (388)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~ 306 (388)
..+.+.+. ...||++++++.++++..++ +.+..+.+.+. .++
T Consensus 212 -----------------------~~~~~~l~-----------~~~gv~i~~~~~v~~i~~~~-~~~~~v~~~~~---~~g 253 (338)
T 3itj_A 212 -----------------------TIMQKRAE-----------KNEKIEILYNTVALEAKGDG-KLLNALRIKNT---KKN 253 (338)
T ss_dssp -----------------------HHHHHHHH-----------HCTTEEEECSEEEEEEEESS-SSEEEEEEEET---TTT
T ss_pred -----------------------HHHHHHHH-----------hcCCeEEeecceeEEEEccc-CcEEEEEEEEC---CCC
Confidence 11111221 13499999999999998753 56777777542 245
Q ss_pred ceeEEecceEEEccccCCccCC--CCCcccCCCccccCCCCCCeecchhhHHhHHH
Q psy4525 307 DTELIPSGIAFRSIGYQSRCVD--SDIPFNEKSCTVIPKEGVPVVTWEGWKAIDKE 360 (388)
Q Consensus 307 ~~~~l~~D~Vi~a~G~~p~~~~--~~l~~~~~~gi~l~~~~~~~~~~~~w~~~~~~ 360 (388)
++++++||.||+|+|++|+... .++++++++.+.+++.....-..+.|...|+.
T Consensus 254 ~~~~i~~D~vi~a~G~~p~~~~~~~~l~~~~~G~i~v~~~~~~t~~~~vya~GD~~ 309 (338)
T 3itj_A 254 EETDLPVSGLFYAIGHTPATKIVAGQVDTDEAGYIKTVPGSSLTSVPGFFAAGDVQ 309 (338)
T ss_dssp EEEEEECSEEEECSCEEECCGGGBTTBCBCTTSCBCCCTTSSBCSSTTEEECGGGG
T ss_pred ceEEEEeCEEEEEeCCCCChhHhhCceEecCCCcEEEcCcccccCCCCEEEeeccC
Confidence 5678999999999999998742 35666655445433333222223455555544
No 6
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=99.94 E-value=1e-25 Score=221.75 Aligned_cols=249 Identities=15% Similarity=0.170 Sum_probs=164.8
Q ss_pred CcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCC----CCCCcchhHHHHHHHHhhcCCCcEEEceEEE
Q psy4525 14 PNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGV----APDHPEVKNVINTFTKTGDNPRVNFYGNICL 89 (388)
Q Consensus 14 ~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~----~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v 89 (388)
++|+|||||+||+++|..|++..++.+|+|||+++.+|.. ..+. ........++.....+.+.+.+++++.+..+
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~V 81 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYL-SGGLSAYFNHTINELHEARYITEEELRRQKIQLLLNREV 81 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSC-CC----------------CCCCHHHHHHTTEEEECSCEE
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCccc-CccchhhhcCCCCCHHHhhcCCHHHHHHCCCEEEECCEE
Confidence 5999999999999999999996559999999999876621 1111 0011111122111234445578888877665
Q ss_pred EE-E-----eee----cccccccCEEEEeeCCCCCCCCCCCCCCCCCeeecccccccccCCCCccccCcCCCCCeEEEEc
Q psy4525 90 GQ-D-----ISL----GDLTNAYHAVVLTYGADNDKKLNIPGEDGKNIISARSFVGWYNGLPEDASLDLSLDCEEATILG 159 (388)
Q Consensus 90 ~~-~-----~~~----~~~~~~yd~lvlAtG~~~~~~~~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVIG 159 (388)
.. + +.+ +.....||+||+|||+.+ +.|++||.+.+++++..++...... . .....+++++|||
T Consensus 82 ~~id~~~~~v~v~~~~~~~~~~~d~lviAtG~~p-~~p~i~g~~~~~v~~~~~~~~~~~~----~--~~~~~~~~vvViG 154 (452)
T 3oc4_A 82 VAMDVENQLIAWTRKEEQQWYSYDKLILATGASQ-FSTQIRGSQTEKLLKYKFLSGALAA----V--PLLENSQTVAVIG 154 (452)
T ss_dssp EEEETTTTEEEEEETTEEEEEECSEEEECCCCCB-CCCCCBTTTCTTEEEGGGCC----C----C--HHHHTCSEEEEEC
T ss_pred EEEECCCCEEEEEecCceEEEEcCEEEECCCccc-CCCCCCCCCCCCEEEeCCHHHHHHH----H--HHHhcCCEEEEEC
Confidence 32 1 222 112347999999999987 5788999888888877665422110 0 1122478999999
Q ss_pred CChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecCcccccCCHHHHHHHhcCCCceEEecccccccch
Q psy4525 160 QGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRGALQVAFTIKEFREMTKLPHVQTVFRNEQLCGVH 239 (388)
Q Consensus 160 gG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~~~~~~~~~~el~~l~~~~~~~~~~~~~~~~~~~ 239 (388)
+|++|+|+|..|. +.+ .+|+++.|.+.+...+.++++.
T Consensus 155 gG~~g~E~A~~l~--------------------~~g-~~Vtlv~~~~~~l~~~~d~~~~--------------------- 192 (452)
T 3oc4_A 155 AGPIGMEAIDFLV--------------------KMK-KTVHVFESLENLLPKYFDKEMV--------------------- 192 (452)
T ss_dssp CSHHHHHHHHHHH--------------------HTT-CEEEEEESSSSSSTTTCCHHHH---------------------
T ss_pred CCHHHHHHHHHHH--------------------hCC-CeEEEEEccCccccccCCHHHH---------------------
Confidence 9999999999876 233 5799999998765442222322
Q ss_pred hhhccccchhhHHHHHHHhhCCCCCCCCCCceeEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEecceEEEc
Q psy4525 240 EASATLARPRKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPSGIAFRS 319 (388)
Q Consensus 240 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a 319 (388)
+.+.+.+. +.||++++++.++++..++ +.+ .+.+ +++ +++||.||+|
T Consensus 193 ----------~~l~~~l~------------~~GV~i~~~~~v~~i~~~~-~~v-~v~~--------~~g-~i~aD~Vv~A 239 (452)
T 3oc4_A 193 ----------AEVQKSLE------------KQAVIFHFEETVLGIEETA-NGI-VLET--------SEQ-EISCDSGIFA 239 (452)
T ss_dssp ----------HHHHHHHH------------TTTEEEEETCCEEEEEECS-SCE-EEEE--------SSC-EEEESEEEEC
T ss_pred ----------HHHHHHHH------------HcCCEEEeCCEEEEEEccC-CeE-EEEE--------CCC-EEEeCEEEEC
Confidence 12222222 6799999999999998543 455 4443 333 7999999999
Q ss_pred cccCCccCC--CCCcccCCCccccCCCC
Q psy4525 320 IGYQSRCVD--SDIPFNEKSCTVIPKEG 345 (388)
Q Consensus 320 ~G~~p~~~~--~~l~~~~~~gi~l~~~~ 345 (388)
+|++||+.. ..+.++.++++.+|+..
T Consensus 240 ~G~~p~~~~l~~~~~~~~~g~i~vd~~~ 267 (452)
T 3oc4_A 240 LNLHPQLAYLDKKIQRNLDQTIAVDAYL 267 (452)
T ss_dssp SCCBCCCSSCCTTSCBCTTSCBCCCTTC
T ss_pred cCCCCChHHHHhhhccCCCCCEEECcCc
Confidence 999999853 23667777778887653
No 7
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.94 E-value=7.9e-27 Score=249.96 Aligned_cols=260 Identities=20% Similarity=0.254 Sum_probs=185.6
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCC-cEEEEcCCCCCCCceeeCCCCCCcchhHHHHHHHHhhcCCCcEEEceEEEE
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQS-TVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTKTGDNPRVNFYGNICLG 90 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~-~v~lie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~ 90 (388)
..++|+||||||||++||..|++ .|+ +|+|||+.+.+||.+.|++ |.+....++.++..+++++.|++++.++.++
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~--~G~~~Vtv~E~~~~~GG~~~~~i-p~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~ 262 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLAR--LGYSDITIFEKQEYVGGLSTSEI-PQFRLPYDVVNFEIELMKDLGVKIICGKSLS 262 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHH--TTCCCEEEEESSSSCSTHHHHTS-CTTTSCHHHHHHHHHHHHTTTCEEEESCCBS
T ss_pred CCCEEEEECccHHHHHHHHHHHh--cCCCcEEEEeCCCCCCccccccC-CcccCCHHHHHHHHHHHHHCCcEEEcccEec
Confidence 35799999999999999999999 898 7999999999999999988 7776667777777888888999999888775
Q ss_pred E-Eeeecccc-cccCEEEEeeCCCCCCCCCC-CCCC-CCCeeecccccccccCC---CCcc-ccCcCCCCCeEEEEcCCh
Q psy4525 91 Q-DISLGDLT-NAYHAVVLTYGADNDKKLNI-PGED-GKNIISARSFVGWYNGL---PEDA-SLDLSLDCEEATILGQGN 162 (388)
Q Consensus 91 ~-~~~~~~~~-~~yd~lvlAtG~~~~~~~~i-~g~~-~~~v~~~~~~~~~~~~~---~~~~-~~~~~~~~~~vvVIGgG~ 162 (388)
. ++++++.. ..||+||||||+..++.+++ +|.+ .++++++.+|+...+.. ..+. .......+++|+|||||+
T Consensus 263 ~~~v~~~~~~~~~~d~vvlAtGa~~p~~l~~~~G~~~~~gv~~a~~~L~~~~~~~~~~~~~~~~~~~~~~~~VvVIGgG~ 342 (1025)
T 1gte_A 263 ENEITLNTLKEEGYKAAFIGIGLPEPKTDDIFQGLTQDQGFYTSKDFLPLVAKSSKAGMCACHSPLPSIRGAVIVLGAGD 342 (1025)
T ss_dssp TTSBCHHHHHHTTCCEEEECCCCCEECCCGGGTTCCTTTTEEEHHHHHHHHHHHHCBTTBSCCCCCCCCCSEEEEECSSH
T ss_pred cceEEhhhcCccCCCEEEEecCCCCCCCCCCCCCCCCCCCEEEhHHHHHHHHhhcccccccccccccccCCcEEEECCCh
Confidence 3 34444433 47999999999852245554 4643 46899988887532110 0000 001122357999999999
Q ss_pred HHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecCcccccCCHHHHHHHhcCCCceEEecccccccchhhh
Q psy4525 163 VAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRGALQVAFTIKEFREMTKLPHVQTVFRNEQLCGVHEAS 242 (388)
Q Consensus 163 sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~~~~~~~~~~el~~l~~~~~~~~~~~~~~~~~~~~~~ 242 (388)
+|+|+|..+. +.|+++||+++|++....+..+.++..
T Consensus 343 ~g~e~A~~~~--------------------~~G~~~Vtvv~r~~~~~~~~~~~e~~~----------------------- 379 (1025)
T 1gte_A 343 TAFDCATSAL--------------------RCGARRVFLVFRKGFVNIRAVPEEVEL----------------------- 379 (1025)
T ss_dssp HHHHHHHHHH--------------------HTTCSEEEEECSSCGGGCCSCHHHHHH-----------------------
T ss_pred HHHHHHHHHH--------------------HcCCCEEEEEEecChhhCCCCHHHHHH-----------------------
Confidence 9999999775 356678999999875443333333211
Q ss_pred ccccchhhHHHHHHHhhCCCCCCCCCCceeEEEEecCcceeeeeCCCCceeEEEEc------cCccc-cCCceeEEecce
Q psy4525 243 ATLARPRKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTEFKLNDNGAITGINFA------NQQAL-VTEDTELIPSGI 315 (388)
Q Consensus 243 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~v~~v~~~------~~~~~-~~~~~~~l~~D~ 315 (388)
+ .+.||+++++..++++..+ ++++.++++. ++..+ ..++.++++||.
T Consensus 380 -------------~------------~~~Gv~~~~~~~~~~i~~~-~g~v~~v~~~~~~~~~~g~~~~~~g~~~~i~aD~ 433 (1025)
T 1gte_A 380 -------------A------------KEEKCEFLPFLSPRKVIVK-GGRIVAVQFVRTEQDETGKWNEDEDQIVHLKADV 433 (1025)
T ss_dssp -------------H------------HHTTCEEECSEEEEEEEEE-TTEEEEEEEEEEEECTTSCEEEEEEEEEEEECSE
T ss_pred -------------H------------HHcCCEEEeCCCceEEEcc-CCeEEEEEEEEeEEcCCCCcccCCCceEEEECCE
Confidence 1 1578999999999999863 5778777664 22111 123346899999
Q ss_pred EEEccccCCccC-----CCCCcccCCCccccCC
Q psy4525 316 AFRSIGYQSRCV-----DSDIPFNEKSCTVIPK 343 (388)
Q Consensus 316 Vi~a~G~~p~~~-----~~~l~~~~~~gi~l~~ 343 (388)
||+|+|++|+.. ..++.+++++.+.+|+
T Consensus 434 Vi~A~G~~~~~~~l~~~~~gl~~~~~G~I~vd~ 466 (1025)
T 1gte_A 434 VISAFGSVLRDPKVKEALSPIKFNRWDLPEVDP 466 (1025)
T ss_dssp EEECSCEECCCHHHHHHTTTSCBCTTSSBCCCT
T ss_pred EEECCCCCCCchhhhhcccCceECCCCCEEECC
Confidence 999999987531 1367777655577775
No 8
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=99.94 E-value=2e-25 Score=208.44 Aligned_cols=255 Identities=17% Similarity=0.157 Sum_probs=175.9
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEE-EcCCCCCCCceeeCC----CCCC---cchhHHHHHHHHhhcCCCcEE
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDI-YEKLPVPFGLVRYGV----APDH---PEVKNVINTFTKTGDNPRVNF 83 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~l-ie~~~~~gg~~~~g~----~p~~---~~~~~~~~~~~~~~~~~~i~~ 83 (388)
.+++|+||||||||+++|..|++ .+++|+| +|+ +.+||.|.+.. .|.. ....++..++.+++.+.++++
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~--~g~~v~li~e~-~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 79 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATR--GGLKNVVMFEK-GMPGGQITSSSEIENYPGVAQVMDGISFMAPWSEQCMRFGLKH 79 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHH--HTCSCEEEECS-SSTTGGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHTTTCCEE
T ss_pred CCceEEEECCCHHHHHHHHHHHH--CCCCeEEEEeC-CCCCceeeeeceeccCCCCCCCCCHHHHHHHHHHHHHHcCcEE
Confidence 45799999999999999999999 7999999 999 67788774311 1333 356788889999999999999
Q ss_pred EceEEEEE------Eee----ecccccccCEEEEeeCCCCCCCCCCCCCCC---CCeeecccccccccCCCCccccCcCC
Q psy4525 84 YGNICLGQ------DIS----LGDLTNAYHAVVLTYGADNDKKLNIPGEDG---KNIISARSFVGWYNGLPEDASLDLSL 150 (388)
Q Consensus 84 ~~~~~v~~------~~~----~~~~~~~yd~lvlAtG~~~~~~~~i~g~~~---~~v~~~~~~~~~~~~~~~~~~~~~~~ 150 (388)
+.+..+.. .+. .++ ...||+||+|||+.+ +.+++||.+. ..+.+..... ....
T Consensus 80 ~~~~v~~i~~~~~~~~~v~~~~~~-~~~~d~lvlAtG~~~-~~~~~~g~~~~~~~~~~~~~~~~------------~~~~ 145 (315)
T 3r9u_A 80 EMVGVEQILKNSDGSFTIKLEGGK-TELAKAVIVCTGSAP-KKAGFKGEDEFFGKGVSTCATCD------------GFFY 145 (315)
T ss_dssp ECCCEEEEEECTTSCEEEEETTSC-EEEEEEEEECCCEEE-CCCCCBTTTTTBTTTEESCHHHH------------GGGG
T ss_pred EEEEEEEEecCCCCcEEEEEecCC-EEEeCEEEEeeCCCC-CCCCCCChhhcCCCeEEeeeccc------------cccc
Confidence 87744332 011 112 347999999999976 5778888653 2332221111 1223
Q ss_pred CCCeEEEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecCcccccCCHHHHHHHhcCCCceEEe
Q psy4525 151 DCEEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRGALQVAFTIKEFREMTKLPHVQTVF 230 (388)
Q Consensus 151 ~~~~vvVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~~~~~~~~~~el~~l~~~~~~~~~~ 230 (388)
.+++++|||+|.+|+|+|..|. ....+|++++|++.+.. ....
T Consensus 146 ~~~~v~viG~g~~~~e~a~~l~---------------------~~g~~v~~~~~~~~~~~--~~~~-------------- 188 (315)
T 3r9u_A 146 KNKEVAVLGGGDTALEEALYLA---------------------NICSKIYLIHRRDEFRA--APST-------------- 188 (315)
T ss_dssp TTSEEEEECCBHHHHHHHHHHH---------------------TTSSEEEEECSSSSCBS--CHHH--------------
T ss_pred CcCEEEEECCCHHHHHHHHHHH---------------------hhCCEEEEEEeCCCCCC--CHHH--------------
Confidence 5799999999999999999886 22357999999876421 1111
Q ss_pred cccccccchhhhccccchhhHHHHHHHhhCCCCCCCCCCceeEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeE
Q psy4525 231 RNEQLCGVHEASATLARPRKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTEL 310 (388)
Q Consensus 231 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~ 310 (388)
...+. .+.||++++++.++++..+ ++.+..+.+.. ..++..+
T Consensus 189 ----------------------~~~~~-----------~~~gv~~~~~~~v~~i~~~-~~~~~~v~~~~----~~g~~~~ 230 (315)
T 3r9u_A 189 ----------------------VEKVK-----------KNEKIELITSASVDEVYGD-KMGVAGVKVKL----KDGSIRD 230 (315)
T ss_dssp ----------------------HHHHH-----------HCTTEEEECSCEEEEEEEE-TTEEEEEEEEC----TTSCEEE
T ss_pred ----------------------HHHHH-----------hcCCeEEEeCcEEEEEEcC-CCcEEEEEEEc----CCCCeEE
Confidence 11111 1579999999999999864 35777777641 1344458
Q ss_pred EecceEEEccccCCccCC--C-----CCcccCCCccccCCCCCCeecchhhHHhHH
Q psy4525 311 IPSGIAFRSIGYQSRCVD--S-----DIPFNEKSCTVIPKEGVPVVTWEGWKAIDK 359 (388)
Q Consensus 311 l~~D~Vi~a~G~~p~~~~--~-----~l~~~~~~gi~l~~~~~~~~~~~~w~~~~~ 359 (388)
+++|.||+|+|++|+... . ++++++++.+.+|+.... -..+.|...|+
T Consensus 231 ~~~D~vv~a~G~~p~~~~~~~~~~~g~l~~~~~g~i~vd~~~~t-~~~~v~a~GD~ 285 (315)
T 3r9u_A 231 LNVPGIFTFVGLNVRNEILKQDDSKFLCNMEEGGQVSVDLKMQT-SVAGLFAAGDL 285 (315)
T ss_dssp ECCSCEEECSCEEECCGGGBCTTSCBSSCBCTTSCBCCCTTCBC-SSTTEEECGGG
T ss_pred eecCeEEEEEcCCCCchhhhcccccceeeecCCCcEEeCCCccc-CCCCEEEeecc
Confidence 999999999999999742 2 266666666777764332 22345555554
No 9
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=99.94 E-value=2.7e-25 Score=209.14 Aligned_cols=243 Identities=20% Similarity=0.273 Sum_probs=164.8
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeC----CCCCC---cchhHHHHHHHHhhcCCCcEEE
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYG----VAPDH---PEVKNVINTFTKTGDNPRVNFY 84 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g----~~p~~---~~~~~~~~~~~~~~~~~~i~~~ 84 (388)
..++|+||||||||+++|..|++ .|.+|+|||+. .+||.+.+. ..|.+ ....++..++.+.+++.+++++
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~--~g~~v~lie~~-~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~ 83 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGR--AQLSTLILEKG-MPGGQIAWSEEVENFPGFPEPIAGMELAQRMHQQAEKFGAKVE 83 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH--TTCCEEEEESS-CTTGGGGGCSCBCCSTTCSSCBCHHHHHHHHHHHHHHTTCEEE
T ss_pred ccCCEEEECCCHHHHHHHHHHHH--cCCcEEEEeCC-CCCcccccccccccCCCCCCCCCHHHHHHHHHHHHHHcCCEEE
Confidence 35799999999999999999999 89999999998 678877431 11222 2456777778888888899887
Q ss_pred ceEEEEEEe----------eeccc-ccccCEEEEeeCCCCCCCCCCCCCCC---CCeeecccccccccCCCCccccCcCC
Q psy4525 85 GNICLGQDI----------SLGDL-TNAYHAVVLTYGADNDKKLNIPGEDG---KNIISARSFVGWYNGLPEDASLDLSL 150 (388)
Q Consensus 85 ~~~~v~~~~----------~~~~~-~~~yd~lvlAtG~~~~~~~~i~g~~~---~~v~~~~~~~~~~~~~~~~~~~~~~~ 150 (388)
.+.....+. ...+. ...||+||+|||+.+ +.+++||.+. .+++...... ....
T Consensus 84 ~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~-~~~~i~g~~~~~~~~~~~~~~~~------------~~~~ 150 (325)
T 2q7v_A 84 MDEVQGVQHDATSHPYPFTVRGYNGEYRAKAVILATGADP-RKLGIPGEDNFWGKGVSTCATCD------------GFFY 150 (325)
T ss_dssp ECCEEEEEECTTSSSCCEEEEESSCEEEEEEEEECCCEEE-CCCCCTTTTTTBTTTEESCHHHH------------GGGG
T ss_pred eeeEEEEEeccCCCceEEEEECCCCEEEeCEEEECcCCCc-CCCCCCChhhccCceEEEeccCC------------HHHc
Confidence 654332221 11122 247999999999977 5778888652 2222111110 1123
Q ss_pred CCCeEEEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecCcccccCCHHHHHHHhcCCCceEEe
Q psy4525 151 DCEEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRGALQVAFTIKEFREMTKLPHVQTVF 230 (388)
Q Consensus 151 ~~~~vvVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~~~~~~~~~~el~~l~~~~~~~~~~ 230 (388)
.+++++|||+|.+|+|+|..|. ....+|+++.|++.+.. . ++
T Consensus 151 ~~~~v~VvG~G~~g~e~A~~l~---------------------~~g~~Vtlv~~~~~~~~--~-~~-------------- 192 (325)
T 2q7v_A 151 KGKKVVVIGGGDAAVEEGMFLT---------------------KFADEVTVIHRRDTLRA--N-KV-------------- 192 (325)
T ss_dssp TTCEEEEECCSHHHHHHHHHHT---------------------TTCSEEEEECSSSSCCS--C-HH--------------
T ss_pred CCCEEEEECCCHHHHHHHHHHH---------------------hcCCEEEEEeCCCcCCc--c-hH--------------
Confidence 4789999999999999999886 22468999999875421 1 11
Q ss_pred cccccccchhhhccccchhhHHHHHHHhhCCCCCCCCCCceeEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeE
Q psy4525 231 RNEQLCGVHEASATLARPRKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTEL 310 (388)
Q Consensus 231 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~ 310 (388)
+.+.+. ...||++++++.++++..+ +.+..+.+.+. ..++..+
T Consensus 193 ---------------------~~~~l~-----------~~~gv~i~~~~~v~~i~~~--~~v~~v~~~~~---~~g~~~~ 235 (325)
T 2q7v_A 193 ---------------------AQARAF-----------ANPKMKFIWDTAVEEIQGA--DSVSGVKLRNL---KTGEVSE 235 (325)
T ss_dssp ---------------------HHHHHH-----------TCTTEEEECSEEEEEEEES--SSEEEEEEEET---TTCCEEE
T ss_pred ---------------------HHHHHH-----------hcCCceEecCCceEEEccC--CcEEEEEEEEC---CCCcEEE
Confidence 111111 1469999999999999863 56667766421 1244458
Q ss_pred EecceEEEccccCCccC-C-CCCcccCCCccccCCCC
Q psy4525 311 IPSGIAFRSIGYQSRCV-D-SDIPFNEKSCTVIPKEG 345 (388)
Q Consensus 311 l~~D~Vi~a~G~~p~~~-~-~~l~~~~~~gi~l~~~~ 345 (388)
++||.||+|+|++||.. . ..+++++++++.+|+..
T Consensus 236 i~~D~vi~a~G~~p~~~~l~~~~~~~~~g~i~vd~~~ 272 (325)
T 2q7v_A 236 LATDGVFIFIGHVPNTAFVKDTVSLRDDGYVDVRDEI 272 (325)
T ss_dssp EECSEEEECSCEEESCGGGTTTSCBCTTSCBCCBTTT
T ss_pred EEcCEEEEccCCCCChHHHhhhcccCCCccEecCCCC
Confidence 99999999999999963 2 12556666677777653
No 10
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=99.94 E-value=1.2e-25 Score=211.62 Aligned_cols=240 Identities=20% Similarity=0.238 Sum_probs=169.6
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCC-------CCCCc--chhHHHHHHHHhhcCCCcEE
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGV-------APDHP--EVKNVINTFTKTGDNPRVNF 83 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~-------~p~~~--~~~~~~~~~~~~~~~~~i~~ 83 (388)
.++|+|||||+||+++|..|++ .|++|+|||+.+.+||.|.+.. .|.++ ...++..++.+.+.++++++
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~--~g~~v~lie~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGM--RQASVKIIESLPQLGGQLSALYPEKYIYDVAGFPKIRAQELINNLKEQMAKFDQTI 84 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSSCHHHHHHCTTSEECCSTTCSSEEHHHHHHHHHHHHTTSCCEE
T ss_pred cceEEEECCCHHHHHHHHHHHH--CCCCEEEEEcCCCCCceehhcCCCceEeccCCCCCCCHHHHHHHHHHHHHHhCCcE
Confidence 4799999999999999999999 8999999999999998884311 13333 36788888889999899999
Q ss_pred EceEEEEE---------EeeecccccccCEEEEeeCC---CCCCCCCCCCCCC---CCeeecccccccccCCCCccccCc
Q psy4525 84 YGNICLGQ---------DISLGDLTNAYHAVVLTYGA---DNDKKLNIPGEDG---KNIISARSFVGWYNGLPEDASLDL 148 (388)
Q Consensus 84 ~~~~~v~~---------~~~~~~~~~~yd~lvlAtG~---~~~~~~~i~g~~~---~~v~~~~~~~~~~~~~~~~~~~~~ 148 (388)
+.++.+.. .+...+.+..||+||+|||+ .+ +.+++||.+. ..++. .+. + ..
T Consensus 85 ~~~~~v~~i~~~~~~~~~v~~~~g~~~~d~vVlAtG~~~~~p-~~~~~~g~~~~~g~~~~~--~~~-------~----~~ 150 (332)
T 3lzw_A 85 CLEQAVESVEKQADGVFKLVTNEETHYSKTVIITAGNGAFKP-RKLELENAEQYEGKNLHY--FVD-------D----LQ 150 (332)
T ss_dssp ECSCCEEEEEECTTSCEEEEESSEEEEEEEEEECCTTSCCEE-CCCCCTTGGGGBTTTEES--SCS-------C----GG
T ss_pred EccCEEEEEEECCCCcEEEEECCCEEEeCEEEECCCCCcCCC-CCCCCCChhhccCceEEE--ecC-------C----HH
Confidence 97766532 22333333579999999998 55 5677887652 11211 111 1 12
Q ss_pred CCCCCeEEEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecCcccccCCHHHHHHHhcCCCceE
Q psy4525 149 SLDCEEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRGALQVAFTIKEFREMTKLPHVQT 228 (388)
Q Consensus 149 ~~~~~~vvVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~~~~~~~~~~el~~l~~~~~~~~ 228 (388)
...+++++|||+|.+|+|+|..|. ....+|+++.|.+.+... ...+
T Consensus 151 ~~~~~~v~vvG~g~~~~e~a~~l~---------------------~~~~~v~~~~~~~~~~~~--~~~~----------- 196 (332)
T 3lzw_A 151 KFAGRRVAILGGGDSAVDWALMLE---------------------PIAKEVSIIHRRDKFRAH--EHSV----------- 196 (332)
T ss_dssp GGBTCEEEEECSSHHHHHHHHHHT---------------------TTBSEEEEECSSSSCSSC--HHHH-----------
T ss_pred HcCCCEEEEECCCHhHHHHHHHHH---------------------hhCCeEEEEEecCcCCcc--HHHH-----------
Confidence 234799999999999999999886 224579999998764211 1111
Q ss_pred EecccccccchhhhccccchhhHHHHHHHhhCCCCCCCCCCceeEEEEecCcceeeeeCCCCceeEEEEccCccccCCce
Q psy4525 229 VFRNEQLCGVHEASATLARPRKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDT 308 (388)
Q Consensus 229 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~ 308 (388)
..+ .+.||++++++.++++..++ .+..+.+.+. .++++
T Consensus 197 -------------------------~~l------------~~~gv~~~~~~~v~~i~~~~--~~~~v~~~~~---~~g~~ 234 (332)
T 3lzw_A 197 -------------------------ENL------------HASKVNVLTPFVPAELIGED--KIEQLVLEEV---KGDRK 234 (332)
T ss_dssp -------------------------HHH------------HHSSCEEETTEEEEEEECSS--SCCEEEEEET---TSCCE
T ss_pred -------------------------HHH------------hcCCeEEEeCceeeEEecCC--ceEEEEEEec---CCCce
Confidence 111 15799999999999998643 3566666543 14567
Q ss_pred eEEecceEEEccccCCccCC---CCCcccCCCccccCCCC
Q psy4525 309 ELIPSGIAFRSIGYQSRCVD---SDIPFNEKSCTVIPKEG 345 (388)
Q Consensus 309 ~~l~~D~Vi~a~G~~p~~~~---~~l~~~~~~gi~l~~~~ 345 (388)
++++||.||+|+|++|+... .++++ .++++.+|+..
T Consensus 235 ~~~~~D~vv~a~G~~p~~~~~~~~~~~~-~~g~i~vd~~~ 273 (332)
T 3lzw_A 235 EILEIDDLIVNYGFVSSLGPIKNWGLDI-EKNSIVVKSTM 273 (332)
T ss_dssp EEEECSEEEECCCEECCCGGGGGSSCCE-ETTEEECCTTS
T ss_pred EEEECCEEEEeeccCCCchHHhhcCccc-cCCeEEeCCCC
Confidence 88999999999999998632 35555 35667777643
No 11
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=99.93 E-value=7.9e-26 Score=223.93 Aligned_cols=251 Identities=14% Similarity=0.168 Sum_probs=169.3
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCce-eeCCCCCCc---------------------------
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLV-RYGVAPDHP--------------------------- 63 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~-~~g~~p~~~--------------------------- 63 (388)
..++|+||||||||+++|..|++ .|.+|+|||+++.+||.| ++|+.|...
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~--~g~~V~liE~~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~g~~~~~~~ 82 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQ--LGFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGIEMSEVR 82 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH--TTCCEEEEECSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHSSHHHHTTEEESCEE
T ss_pred CCCCEEEECCCHHHHHHHHHHHh--CCCeEEEEeCCCCcCCcccccCccchHHHHHHHHHHHHhhhhhHhhCccccCCCc
Confidence 34799999999999999999999 799999999998899887 334433211
Q ss_pred -chhHH-----------HHHHHHhhcCCCcEEEceEEEEE-----Eeeecc---cccccCEEEEeeCCCCCCCCCCCCCC
Q psy4525 64 -EVKNV-----------INTFTKTGDNPRVNFYGNICLGQ-----DISLGD---LTNAYHAVVLTYGADNDKKLNIPGED 123 (388)
Q Consensus 64 -~~~~~-----------~~~~~~~~~~~~i~~~~~~~v~~-----~~~~~~---~~~~yd~lvlAtG~~~~~~~~i~g~~ 123 (388)
....+ ...+.+.+++.+++++.++.+.. .+...+ ....||+||+|||+.+ +.|+++|.+
T Consensus 83 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~~~v~~~~gg~~~~~~d~lViAtGs~p-~~p~i~g~~ 161 (474)
T 1zmd_A 83 LNLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKITGKNQVTATKADGGTQVIDTKNILIATGSEV-TPFPGITID 161 (474)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEEEETTEEEEECTTSCEEEEEEEEEEECCCEEE-CCCTTCCCC
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEecCCEEEEEecCCCcEEEEeCEEEECCCCCC-CCCCCCCCC
Confidence 01111 11224555667899887765432 133322 2348999999999987 577788876
Q ss_pred CCCeeecccccccccCCCCccccCcCCCCCeEEEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEe
Q psy4525 124 GKNIISARSFVGWYNGLPEDASLDLSLDCEEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVG 203 (388)
Q Consensus 124 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~ 203 (388)
..++++..++... ...+++++|||+|++|+|+|..|. +.+ .+|+++.
T Consensus 162 ~~~v~t~~~~~~~------------~~~~~~vvViGgG~~g~E~A~~l~--------------------~~g-~~Vtlv~ 208 (474)
T 1zmd_A 162 EDTIVSSTGALSL------------KKVPEKMVVIGAGVIGVELGSVWQ--------------------RLG-ADVTAVE 208 (474)
T ss_dssp SSSEECHHHHTTC------------SSCCSEEEEECCSHHHHHHHHHHH--------------------HTT-CEEEEEC
T ss_pred cCcEEcHHHHhhc------------cccCceEEEECCCHHHHHHHHHHH--------------------HcC-CEEEEEe
Confidence 5567776655421 113689999999999999999776 233 5799999
Q ss_pred ecCcccccCCHHHHHHHhcCCCceEEecccccccchhhhccccchhhHHHHHHHhhCCCCCCCCCCceeEEEEecCccee
Q psy4525 204 RRGALQVAFTIKEFREMTKLPHVQTVFRNEQLCGVHEASATLARPRKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTE 283 (388)
Q Consensus 204 r~~~~~~~~~~~el~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~ 283 (388)
|.+.+.....++++. +.+.+.+. +.||++++++.+++
T Consensus 209 ~~~~~l~~~~~~~~~-------------------------------~~l~~~l~------------~~Gv~i~~~~~v~~ 245 (474)
T 1zmd_A 209 FLGHVGGVGIDMEIS-------------------------------KNFQRILQ------------KQGFKFKLNTKVTG 245 (474)
T ss_dssp SSSSSSCSSCCHHHH-------------------------------HHHHHHHH------------HTTCEEECSEEEEE
T ss_pred ccCccCCcccCHHHH-------------------------------HHHHHHHH------------HCCCEEEeCceEEE
Confidence 998764411112221 12222222 57999999999999
Q ss_pred eeeCCCCceeEEEEccCccccCCceeEEecceEEEccccCCccCC-----CCCcccCCCccccCCCC
Q psy4525 284 FKLNDNGAITGINFANQQALVTEDTELIPSGIAFRSIGYQSRCVD-----SDIPFNEKSCTVIPKEG 345 (388)
Q Consensus 284 i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~p~~~~-----~~l~~~~~~gi~l~~~~ 345 (388)
+..++++.+ .+.+.+ ..++++++++||.||+|+|++||+.. .++++++++.+.+|+..
T Consensus 246 i~~~~~~~~-~v~~~~---~~~~~~~~i~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~ 308 (474)
T 1zmd_A 246 ATKKSDGKI-DVSIEA---ASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGRIPVNTRF 308 (474)
T ss_dssp EEECTTSCE-EEEEEE---TTSCCCEEEEESEEEECSCEEECCTTSSHHHHTCCCCTTSCCCCCTTC
T ss_pred EEEcCCceE-EEEEEe---cCCCCceEEEcCEEEECcCCCcCCCcCCchhcCCccCCCCCEEECcCC
Confidence 987543322 333221 01356678999999999999999742 34666655558887654
No 12
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.93 E-value=2.6e-25 Score=208.31 Aligned_cols=241 Identities=18% Similarity=0.192 Sum_probs=168.8
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCC----CCCC--cchhHHHHHHHHhhcCCCcEEEce
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGV----APDH--PEVKNVINTFTKTGDNPRVNFYGN 86 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~----~p~~--~~~~~~~~~~~~~~~~~~i~~~~~ 86 (388)
.++|+|||||+||+++|..|++ .|.+|+|||+. +||.|.+.. .|.+ ....++..++.+.+.+++++++..
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~--~g~~v~lie~~--~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 90 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSAR--YMLKTLVIGET--PGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLLD 90 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH--TTCCEEEEESS--TTGGGGGCCEECCSTTSTTEEHHHHHHHHHHHHHTTTCCEEES
T ss_pred ccCEEEECccHHHHHHHHHHHH--CCCcEEEEecc--CCCeecccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEEE
Confidence 4799999999999999999999 89999999998 888875411 1333 245778888888888889888774
Q ss_pred EEEEEE-------eeecc-cccccCEEEEeeCCCCCCCCCCCCCCC---CCeeecccccccccCCCCccccCcCCCCCeE
Q psy4525 87 ICLGQD-------ISLGD-LTNAYHAVVLTYGADNDKKLNIPGEDG---KNIISARSFVGWYNGLPEDASLDLSLDCEEA 155 (388)
Q Consensus 87 ~~v~~~-------~~~~~-~~~~yd~lvlAtG~~~~~~~~i~g~~~---~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~v 155 (388)
.....+ +...+ ....||+||+|||+.+ +.+++||.+. +++....... .....++++
T Consensus 91 ~v~~i~~~~~~~~v~~~~g~~~~~d~lvlAtG~~~-~~~~i~g~~~~~~~~~~~~~~~~------------~~~~~~~~v 157 (323)
T 3f8d_A 91 IVEKIENRGDEFVVKTKRKGEFKADSVILGIGVKR-RKLGVPGEQEFAGRGISYCSVAD------------APLFKNRVV 157 (323)
T ss_dssp CEEEEEEC--CEEEEESSSCEEEEEEEEECCCCEE-CCCCCTTTTTTBTTTEESCHHHH------------GGGGTTCEE
T ss_pred EEEEEEecCCEEEEEECCCCEEEcCEEEECcCCCC-ccCCCCchhhhcCCceEEeccCC------------HhHcCCCEE
Confidence 333221 33333 2347999999999987 5778888653 3332211100 123357999
Q ss_pred EEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecCcccccCCHHHHHHHhcCCCceEEeccccc
Q psy4525 156 TILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRGALQVAFTIKEFREMTKLPHVQTVFRNEQL 235 (388)
Q Consensus 156 vVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~~~~~~~~~~el~~l~~~~~~~~~~~~~~~ 235 (388)
+|||+|.+|+|+|..|. +. ..+|+++.|++.+... +
T Consensus 158 ~vvG~G~~~~e~a~~l~--------------------~~-g~~v~~~~~~~~~~~~---~-------------------- 193 (323)
T 3f8d_A 158 AVIGGGDSALEGAEILS--------------------SY-STKVYLIHRRDTFKAQ---P-------------------- 193 (323)
T ss_dssp EEECCSHHHHHHHHHHH--------------------HH-SSEEEEECSSSSCCSC---H--------------------
T ss_pred EEECCCHHHHHHHHHHH--------------------Hh-CCeEEEEEeCCCCCcC---H--------------------
Confidence 99999999999999876 12 3579999998764321 0
Q ss_pred ccchhhhccccchhhHHHHHHHhhCCCCCCCCCCceeEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEecce
Q psy4525 236 CGVHEASATLARPRKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPSGI 315 (388)
Q Consensus 236 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~ 315 (388)
.+.+.+. ...||++++++.++++..+ +.+..+.+.+. .+++..++++|.
T Consensus 194 ---------------~~~~~~~-----------~~~gv~~~~~~~v~~i~~~--~~~~~v~~~~~---~~g~~~~~~~D~ 242 (323)
T 3f8d_A 194 ---------------IYVETVK-----------KKPNVEFVLNSVVKEIKGD--KVVKQVVVENL---KTGEIKELNVNG 242 (323)
T ss_dssp ---------------HHHHHHH-----------TCTTEEEECSEEEEEEEES--SSEEEEEEEET---TTCCEEEEECSE
T ss_pred ---------------HHHHHHH-----------hCCCcEEEeCCEEEEEecc--CceeEEEEEEC---CCCceEEEEcCE
Confidence 1111111 1459999999999999864 56667776431 124445899999
Q ss_pred EEEccccCCccC---CCCCcccCCCccccCCCC
Q psy4525 316 AFRSIGYQSRCV---DSDIPFNEKSCTVIPKEG 345 (388)
Q Consensus 316 Vi~a~G~~p~~~---~~~l~~~~~~gi~l~~~~ 345 (388)
||+|+|++|+.. ..++++++.+++.+|+..
T Consensus 243 vv~a~G~~p~~~~~~~~g~~~~~~g~i~vd~~~ 275 (323)
T 3f8d_A 243 VFIEIGFDPPTDFAKSNGIETDTNGYIKVDEWM 275 (323)
T ss_dssp EEECCCEECCHHHHHHTTCCBCTTSSBCCCTTC
T ss_pred EEEEECCCCChhHHhhcCeeecCCCcEecCCCc
Confidence 999999999942 146777777778887654
No 13
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=99.93 E-value=3.6e-26 Score=222.63 Aligned_cols=250 Identities=14% Similarity=0.111 Sum_probs=168.0
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCc--EEEEcCCCCCCCc---eeeCCCCCCcchhHHHHHHHHhhcCCCcEEEce
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQST--VDIYEKLPVPFGL---VRYGVAPDHPEVKNVINTFTKTGDNPRVNFYGN 86 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~--v~lie~~~~~gg~---~~~g~~p~~~~~~~~~~~~~~~~~~~~i~~~~~ 86 (388)
..++|+|||||+||+++|..|++ .|.+ |++||+++.++.. +............++.....+++.+.+++++.+
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~--~g~~~~V~lie~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 85 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQ--NGFEGRVLVIGREPEIPYERPPLSKEYLAREKTFERICIRPAQFWEDKAVEMKLG 85 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH--TTCCSCEEEEESSSSCCBCSGGGGTTTTTTSSCSGGGBSSCHHHHHHTTEEEEET
T ss_pred CCCcEEEECChHHHHHHHHHHHc--cCcCCCEEEEecCCCCCcCcccCCHHHHcCCCCHHHhccCCHHHHHHCCcEEEeC
Confidence 45799999999999999999999 6766 9999998765321 111111111122223223344455678998887
Q ss_pred EEEEE------Eeeeccc-ccccCEEEEeeCCCCCCCCCCCCCCCCCeeecccccccccCCCCccccCcCCC-CCeEEEE
Q psy4525 87 ICLGQ------DISLGDL-TNAYHAVVLTYGADNDKKLNIPGEDGKNIISARSFVGWYNGLPEDASLDLSLD-CEEATIL 158 (388)
Q Consensus 87 ~~v~~------~~~~~~~-~~~yd~lvlAtG~~~~~~~~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~vvVI 158 (388)
+.+.. .+.+.+. ...||+||+|||+.+ +.+++||.+.++++..+....... .. ..... +++++||
T Consensus 86 ~~v~~id~~~~~v~~~~g~~~~~d~lvlAtG~~~-~~~~i~g~~~~~v~~~~~~~d~~~----l~--~~~~~~~~~vvVi 158 (415)
T 3lxd_A 86 AEVVSLDPAAHTVKLGDGSAIEYGKLIWATGGDP-RRLSCVGADLAGVHAVRTKEDADR----LM--AELDAGAKNAVVI 158 (415)
T ss_dssp CCEEEEETTTTEEEETTSCEEEEEEEEECCCEEC-CCCBTTSSCCBTEECCCSHHHHHH----HH--HHHHTTCCEEEEE
T ss_pred CEEEEEECCCCEEEECCCCEEEeeEEEEccCCcc-CCCCCCCccccCEEEEcCHHHHHH----HH--HHhhhcCCeEEEE
Confidence 55432 2444444 348999999999987 588899988888876544332110 00 11112 7899999
Q ss_pred cCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecCcccccCCHHHHHHHhcCCCceEEecccccccc
Q psy4525 159 GQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRGALQVAFTIKEFREMTKLPHVQTVFRNEQLCGV 238 (388)
Q Consensus 159 GgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~~~~~~~~~~el~~l~~~~~~~~~~~~~~~~~~ 238 (388)
|+|++|+|+|..|. +.+ .+|+++.+.+.+.....++++.+
T Consensus 159 GgG~~g~e~A~~l~--------------------~~g-~~Vtvv~~~~~~l~~~~~~~~~~------------------- 198 (415)
T 3lxd_A 159 GGGYIGLEAAAVLT--------------------KFG-VNVTLLEALPRVLARVAGEALSE------------------- 198 (415)
T ss_dssp CCSHHHHHHHHHHH--------------------HTT-CEEEEEESSSSTTTTTSCHHHHH-------------------
T ss_pred CCCHHHHHHHHHHH--------------------hcC-CeEEEEecCCchhhhhcCHHHHH-------------------
Confidence 99999999999776 233 57999999987654333333221
Q ss_pred hhhhccccchhhHHHHHHHhhCCCCCCCCCCceeEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEecceEEE
Q psy4525 239 HEASATLARPRKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPSGIAFR 318 (388)
Q Consensus 239 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~ 318 (388)
.+.+.+. +.||++++++.++++..+ ++++..+++ .++++++||.||+
T Consensus 199 ------------~l~~~l~------------~~GV~i~~~~~v~~i~~~-~~~v~~v~l--------~dG~~i~aD~Vv~ 245 (415)
T 3lxd_A 199 ------------FYQAEHR------------AHGVDLRTGAAMDCIEGD-GTKVTGVRM--------QDGSVIPADIVIV 245 (415)
T ss_dssp ------------HHHHHHH------------HTTCEEEETCCEEEEEES-SSBEEEEEE--------SSSCEEECSEEEE
T ss_pred ------------HHHHHHH------------hCCCEEEECCEEEEEEec-CCcEEEEEe--------CCCCEEEcCEEEE
Confidence 1222222 579999999999999874 467777765 3456899999999
Q ss_pred ccccCCccC---CCCCcccCCCccccCCCC
Q psy4525 319 SIGYQSRCV---DSDIPFNEKSCTVIPKEG 345 (388)
Q Consensus 319 a~G~~p~~~---~~~l~~~~~~gi~l~~~~ 345 (388)
|+|++|++. ..+++.+ +|+.+|+..
T Consensus 246 a~G~~p~~~l~~~~gl~~~--~gi~vd~~~ 273 (415)
T 3lxd_A 246 GIGIVPCVGALISAGASGG--NGVDVDEFC 273 (415)
T ss_dssp CSCCEESCHHHHHTTCCCS--SSEECCTTC
T ss_pred CCCCccChHHHHhCCCCcC--CCEEECCCC
Confidence 999999973 1455555 578877643
No 14
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=99.93 E-value=2.2e-25 Score=210.71 Aligned_cols=258 Identities=19% Similarity=0.221 Sum_probs=170.7
Q ss_pred CCCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeC----CCCCC---cchhHHHHHHHHhhcCCCcEE
Q psy4525 11 QLKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYG----VAPDH---PEVKNVINTFTKTGDNPRVNF 83 (388)
Q Consensus 11 ~~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g----~~p~~---~~~~~~~~~~~~~~~~~~i~~ 83 (388)
...++|+||||||||+++|..|++ .|.+|+|||+. .+||.|.+. ..|.+ ....++..++.+.+.+.++++
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~--~g~~v~lie~~-~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~ 88 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAAR--AQLAPLVFEGT-SFGGALMTTTDVENYPGFRNGITGPELMDEMREQALRFGADL 88 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHH--TTCCCEEECCS-SCSCGGGSCSCBCCSTTCTTCBCHHHHHHHHHHHHHHTTCEE
T ss_pred CCcCCEEEECCCHHHHHHHHHHHh--CCCeEEEEecC-CCCCceeccchhhhcCCCCCCCCHHHHHHHHHHHHHHcCCEE
Confidence 446899999999999999999999 89999999976 678776432 11332 235677777777788889999
Q ss_pred EceEEEEEE------e-eeccc-ccccCEEEEeeCCCCCCCCCCCCCCC---CCeeecccccccccCCCCccccCcCCCC
Q psy4525 84 YGNICLGQD------I-SLGDL-TNAYHAVVLTYGADNDKKLNIPGEDG---KNIISARSFVGWYNGLPEDASLDLSLDC 152 (388)
Q Consensus 84 ~~~~~v~~~------~-~~~~~-~~~yd~lvlAtG~~~~~~~~i~g~~~---~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (388)
+.++....+ + ...+. ...||+||+|||+.+ +.+++||.+. ..++...... .....+
T Consensus 89 ~~~~v~~i~~~~~~~v~~~~~g~~~~~d~lviAtG~~~-~~~~i~g~~~~~~~~~~~~~~~~------------~~~~~~ 155 (335)
T 2a87_A 89 RMEDVESVSLHGPLKSVVTADGQTHRARAVILAMGAAA-RYLQVPGEQELLGRGVSSCATCD------------GFFFRD 155 (335)
T ss_dssp ECCCEEEEECSSSSEEEEETTSCEEEEEEEEECCCEEE-CCCCCTHHHHTBTTTEESCHHHH------------GGGGTT
T ss_pred EEeeEEEEEeCCcEEEEEeCCCCEEEeCEEEECCCCCc-cCCCCCchHhccCCceEEeeccc------------hhhcCC
Confidence 887643322 2 33333 347999999999977 4677777431 2222211111 112357
Q ss_pred CeEEEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecCcccccCCHHHHHHHhcCCCceEEecc
Q psy4525 153 EEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRGALQVAFTIKEFREMTKLPHVQTVFRN 232 (388)
Q Consensus 153 ~~vvVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~~~~~~~~~~el~~l~~~~~~~~~~~~ 232 (388)
++|+|||+|.+|+|+|..|+ ....+|+++.|++.+...
T Consensus 156 ~~v~ViG~G~~g~e~a~~l~---------------------~~g~~V~l~~~~~~~~~~--------------------- 193 (335)
T 2a87_A 156 QDIAVIGGGDSAMEEATFLT---------------------RFARSVTLVHRRDEFRAS--------------------- 193 (335)
T ss_dssp CEEEEECSSHHHHHHHHHHT---------------------TTCSEEEEECSSSSCSSC---------------------
T ss_pred CEEEEECCCHHHHHHHHHHH---------------------HhCCeEEEEEcCCcCCcc---------------------
Confidence 99999999999999999886 224589999998764211
Q ss_pred cccccchhhhccccchhhHHHHHHHhhCCCCCCCCCCceeEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEe
Q psy4525 233 EQLCGVHEASATLARPRKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIP 312 (388)
Q Consensus 233 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~ 312 (388)
+.+.+.+. .+.||+++++..++++..+ +.+..+.+.+. ..++.++++
T Consensus 194 -----------------~~~~~~~~-----------~~~gV~v~~~~~v~~i~~~--~~~~~v~~~~~---~~g~~~~i~ 240 (335)
T 2a87_A 194 -----------------KIMLDRAR-----------NNDKIRFLTNHTVVAVDGD--TTVTGLRVRDT---NTGAETTLP 240 (335)
T ss_dssp -----------------TTHHHHHH-----------HCTTEEEECSEEEEEEECS--SSCCEEEEEEE---TTSCCEEEC
T ss_pred -----------------HHHHHHHh-----------ccCCcEEEeCceeEEEecC--CcEeEEEEEEc---CCCceEEee
Confidence 00010110 1579999999999999853 34555655421 134457899
Q ss_pred cceEEEccccCCccCC--CCCcccCCCccccCCCCCCeecchhhHHhHH
Q psy4525 313 SGIAFRSIGYQSRCVD--SDIPFNEKSCTVIPKEGVPVVTWEGWKAIDK 359 (388)
Q Consensus 313 ~D~Vi~a~G~~p~~~~--~~l~~~~~~gi~l~~~~~~~~~~~~w~~~~~ 359 (388)
||.||+|+|++|++.. .++.+++++.+.+|+.....-..+.|...|+
T Consensus 241 ~D~vi~a~G~~p~~~~~~~~l~~~~~G~i~vd~~~~~t~~~~iya~GD~ 289 (335)
T 2a87_A 241 VTGVFVAIGHEPRSGLVREAIDVDPDGYVLVQGRTTSTSLPGVFAAGDL 289 (335)
T ss_dssp CSCEEECSCEEECCTTTBTTBCBCTTSCBCCSTTSSBCSSTTEEECGGG
T ss_pred cCEEEEccCCccChhHhhcccccCCCccEEeCCCCCccCCCCEEEeeec
Confidence 9999999999999743 3566665555666654222112244544444
No 15
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=99.93 E-value=1.6e-25 Score=224.19 Aligned_cols=251 Identities=15% Similarity=0.221 Sum_probs=170.4
Q ss_pred CCCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceee-CCCCCC------------------------c-c
Q psy4525 11 QLKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRY-GVAPDH------------------------P-E 64 (388)
Q Consensus 11 ~~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~-g~~p~~------------------------~-~ 64 (388)
...++|+|||||++|+++|..|++ .|.+|+|||+++.+||.|.+ ++.|.+ . .
T Consensus 41 ~~~~dVvIIGgG~aGl~aA~~l~~--~G~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~ 118 (523)
T 1mo9_A 41 PREYDAIFIGGGAAGRFGSAYLRA--MGGRQLIVDRWPFLGGSCPHNACVPHHLFSDCAAELMLARTFSGQYWFPDMTEK 118 (523)
T ss_dssp CSCBSEEEECCSHHHHHHHHHHHH--TTCCEEEEESSSSSSCHHHHHSHHHHHHHHHHHHHHHHHHHTTTSTTCCCCTTC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHH--CCCCEEEEeCCCCCCCcccccCcCchHHHHHHHHHHHHHhhhhhcCcHHHHHhh
Confidence 446899999999999999999999 89999999999878888732 332221 0 0
Q ss_pred ---hhHHHHHHH-------Hhh-----cCCCcEEE-ceEEEEE---EeeecccccccCEEEEeeCCCCCCCCCCCCCCCC
Q psy4525 65 ---VKNVINTFT-------KTG-----DNPRVNFY-GNICLGQ---DISLGDLTNAYHAVVLTYGADNDKKLNIPGEDGK 125 (388)
Q Consensus 65 ---~~~~~~~~~-------~~~-----~~~~i~~~-~~~~v~~---~~~~~~~~~~yd~lvlAtG~~~~~~~~i~g~~~~ 125 (388)
.+++...+. ..+ ++.+++++ .+..... .+.+......||+||+|||+.+ +.|++||.+.+
T Consensus 119 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~~~v~~~g~~~~~d~lViATGs~p-~~p~i~G~~~~ 197 (523)
T 1mo9_A 119 VVGIKEVVDLFRAGRNGPHGIMNFQSKEQLNLEYILNCPAKVIDNHTVEAAGKVFKAKNLILAVGAGP-GTLDVPGVNAK 197 (523)
T ss_dssp CCCHHHHHHHHHHHTHHHHHHHHHHHHHTSCCCEEESSCCEEEETTEEEETTEEEEBSCEEECCCEEC-CCCCSTTTTSB
T ss_pred hhhHHHHHHHHHhhhhhhhhhhhhcccccCCcEEEEeeEEEEeeCCEEEECCEEEEeCEEEECCCCCC-CCCCCCCcccC
Confidence 233333332 344 66788877 4332211 2333333348999999999987 57789998777
Q ss_pred CeeecccccccccCCCCccccCcCCCCCeEEEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeec
Q psy4525 126 NIISARSFVGWYNGLPEDASLDLSLDCEEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRR 205 (388)
Q Consensus 126 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~ 205 (388)
++++..++...+. ...+++++|||+|++|+|+|..|. +.+ .+|+++.+.
T Consensus 198 ~v~~~~~~~~~l~----------~~~g~~vvViGgG~~g~E~A~~l~--------------------~~G-~~Vtlv~~~ 246 (523)
T 1mo9_A 198 GVFDHATLVEELD----------YEPGSTVVVVGGSKTAVEYGCFFN--------------------ATG-RRTVMLVRT 246 (523)
T ss_dssp TEEEHHHHHHHCC----------SCCCSEEEEECCSHHHHHHHHHHH--------------------HTT-CEEEEECSS
T ss_pred cEeeHHHHHHHHH----------hcCCCeEEEECCCHHHHHHHHHHH--------------------HcC-CeEEEEEec
Confidence 7887776651111 122489999999999999999775 233 479999998
Q ss_pred CcccccCCHHHHHHHhcCCCceEEecccccccchhhhccccchhhHHHHHHHhhCCCCCCCCCCceeEEEEecCcceeee
Q psy4525 206 GALQVAFTIKEFREMTKLPHVQTVFRNEQLCGVHEASATLARPRKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTEFK 285 (388)
Q Consensus 206 ~~~~~~~~~~el~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~ 285 (388)
+.+...+. +++. +.+.+.+. +.||++++++.++++.
T Consensus 247 ~~~l~~~~-~~~~-------------------------------~~l~~~l~------------~~GV~i~~~~~V~~i~ 282 (523)
T 1mo9_A 247 EPLKLIKD-NETR-------------------------------AYVLDRMK------------EQGMEIISGSNVTRIE 282 (523)
T ss_dssp CTTTTCCS-HHHH-------------------------------HHHHHHHH------------HTTCEEESSCEEEEEE
T ss_pred Cccccccc-HHHH-------------------------------HHHHHHHH------------hCCcEEEECCEEEEEE
Confidence 76543321 1211 12222222 5799999999999998
Q ss_pred eCCCCceeEEEEccCccccCCcee-EEecceEEEccccCCccC--C--CCCcccCCCccccCCCC
Q psy4525 286 LNDNGAITGINFANQQALVTEDTE-LIPSGIAFRSIGYQSRCV--D--SDIPFNEKSCTVIPKEG 345 (388)
Q Consensus 286 ~~~~~~v~~v~~~~~~~~~~~~~~-~l~~D~Vi~a~G~~p~~~--~--~~l~~~~~~gi~l~~~~ 345 (388)
.++++++.++.+ .+.+++ +++||.||+|+|++||+. . .++++++++.+.+|+..
T Consensus 283 ~~~~~~v~~~~v------~~~~G~~~i~aD~Vv~A~G~~p~~~~~l~~~gl~~~~~G~i~Vd~~~ 341 (523)
T 1mo9_A 283 EDANGRVQAVVA------MTPNGEMRIETDFVFLGLGEQPRSAELAKILGLDLGPKGEVLVNEYL 341 (523)
T ss_dssp ECTTSBEEEEEE------EETTEEEEEECSCEEECCCCEECCHHHHHHHTCCBCTTSCBCCCTTS
T ss_pred EcCCCceEEEEE------EECCCcEEEEcCEEEECcCCccCCccCHHHcCCccCCCCCEEECCCC
Confidence 754555533322 123455 899999999999999983 2 45677665558887653
No 16
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=99.93 E-value=4e-25 Score=208.47 Aligned_cols=252 Identities=19% Similarity=0.202 Sum_probs=166.4
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcC----CCCCCCceeeC----CCCCC---cchhHHHHHHHHhhcCCCc
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEK----LPVPFGLVRYG----VAPDH---PEVKNVINTFTKTGDNPRV 81 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~----~~~~gg~~~~g----~~p~~---~~~~~~~~~~~~~~~~~~i 81 (388)
.++|+||||||+|+++|..|++ .|.+|+|||+ ...+||.+.+. ..|.+ ....++..++.+.+.+.++
T Consensus 8 ~~~vvIIG~G~aGl~~A~~l~~--~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv 85 (333)
T 1vdc_A 8 NTRLCIVGSGPAAHTAAIYAAR--AELKPLLFEGWMANDIAPGGQLTTTTDVENFPGFPEGILGVELTDKFRKQSERFGT 85 (333)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH--TTCCCEEECCSSBTTBCTTCGGGGCSEECCSTTCTTCEEHHHHHHHHHHHHHHTTC
T ss_pred CCCEEEECcCHHHHHHHHHHHH--CCCeEEEEeccCccccCCCceeeeccccccCCCCccCCCHHHHHHHHHHHHHHCCC
Confidence 4799999999999999999999 8999999998 55677766331 11322 2356777777778888899
Q ss_pred EEEceEEEEE-------EeeecccccccCEEEEeeCCCCCCCCCCCCCCC-CCeeecccccccccCCCCccccCcCCCCC
Q psy4525 82 NFYGNICLGQ-------DISLGDLTNAYHAVVLTYGADNDKKLNIPGEDG-KNIISARSFVGWYNGLPEDASLDLSLDCE 153 (388)
Q Consensus 82 ~~~~~~~v~~-------~~~~~~~~~~yd~lvlAtG~~~~~~~~i~g~~~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (388)
+++.++.... .+..+.....||+||+|||+.+ +.+++||.+. .+++....+.. ...+........++
T Consensus 86 ~~~~~~v~~i~~~~~~~~v~~~~~~~~~~~vv~A~G~~~-~~~~~~g~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 160 (333)
T 1vdc_A 86 TIFTETVTKVDFSSKPFKLFTDSKAILADAVILAIGAVA-KRLSFVGSGEVLGGFWNRGISA----CAVCDGAAPIFRNK 160 (333)
T ss_dssp EEECCCCCEEECSSSSEEEECSSEEEEEEEEEECCCEEE-CCCCCBTCSSSSSCCBTTTEES----CHHHHTTSGGGTTS
T ss_pred EEEEeEEEEEEEcCCEEEEEECCcEEEcCEEEECCCCCc-CCCCCCCccccccccccCcEEE----eccCccchhhcCCC
Confidence 9887753222 1223222347999999999987 4777888653 22221111110 00000000113579
Q ss_pred eEEEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecCcccccCCHHHHHHHhcCCCceEEeccc
Q psy4525 154 EATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRGALQVAFTIKEFREMTKLPHVQTVFRNE 233 (388)
Q Consensus 154 ~vvVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~~~~~~~~~~el~~l~~~~~~~~~~~~~ 233 (388)
+|+|||+|.+|+|+|..|. ....+|+++.|++.+... +
T Consensus 161 ~v~VvG~G~~g~e~A~~l~---------------------~~g~~V~lv~~~~~~~~~---~------------------ 198 (333)
T 1vdc_A 161 PLAVIGGGDSAMEEANFLT---------------------KYGSKVYIIHRRDAFRAS---K------------------ 198 (333)
T ss_dssp EEEEECCSHHHHHHHHHHT---------------------TTSSEEEEECSSSSCCSC---H------------------
T ss_pred eEEEECCChHHHHHHHHHH---------------------hcCCeEEEEecCCcCCcc---H------------------
Confidence 9999999999999999886 223589999998754211 0
Q ss_pred ccccchhhhccccchhhHHHHHHHhhCCCCCCCCCCceeEEEEecCcceeeeeCCCC-ceeEEEEccCccccCCceeEEe
Q psy4525 234 QLCGVHEASATLARPRKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTEFKLNDNG-AITGINFANQQALVTEDTELIP 312 (388)
Q Consensus 234 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~-~v~~v~~~~~~~~~~~~~~~l~ 312 (388)
.+.+.+ ..+.||++++++.++++..++++ .+..+.+.+. ..++.++++
T Consensus 199 -----------------~~~~~~-----------~~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~---~~g~~~~i~ 247 (333)
T 1vdc_A 199 -----------------IMQQRA-----------LSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNV---VTGDVSDLK 247 (333)
T ss_dssp -----------------HHHHHH-----------HTCTTEEEECSEEEEEEEESSSSSSEEEEEEEET---TTCCEEEEE
T ss_pred -----------------HHHHHH-----------HhCCCeeEecCCceEEEeCCCCccceeeEEEEec---CCCceEEEe
Confidence 111011 12579999999999999864321 6666766431 134457899
Q ss_pred cceEEEccccCCccCC--CCCcccCCCccccCCC
Q psy4525 313 SGIAFRSIGYQSRCVD--SDIPFNEKSCTVIPKE 344 (388)
Q Consensus 313 ~D~Vi~a~G~~p~~~~--~~l~~~~~~gi~l~~~ 344 (388)
||.||+|+|++|+... .++.+++++.+.+|+.
T Consensus 248 ~D~vi~a~G~~p~~~~~~~~l~~~~~G~i~vd~~ 281 (333)
T 1vdc_A 248 VSGLFFAIGHEPATKFLDGGVELDSDGYVVTKPG 281 (333)
T ss_dssp CSEEEECSCEEESCGGGTTSSCBCTTSCBCCCTT
T ss_pred cCEEEEEeCCccchHHhhccccccCCCCEEechh
Confidence 9999999999999742 3566665555666654
No 17
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=99.93 E-value=1.4e-25 Score=221.71 Aligned_cols=247 Identities=12% Similarity=0.143 Sum_probs=166.2
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCce-eeCCCCCCc----------------------------
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLV-RYGVAPDHP---------------------------- 63 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~-~~g~~p~~~---------------------------- 63 (388)
.++|+||||||||+++|..|++ .|.+|+|||+.+.+||.| ++++.|...
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~--~g~~V~lie~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~g~~~~~~~~~ 79 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQ--LGMKTACVEKRGALGGTCLNVGCIPSKALLHATHLYHDAHANFARYGLMGGEGVTM 79 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH--TTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEECGGGCEE
T ss_pred CCCEEEECCCHHHHHHHHHHHH--CCCeEEEEeCCCCcCCcCCCcCcHhHHHHHHHHHHHHHHHHHHHhcCcccCCCCcc
Confidence 4699999999999999999999 899999999998899876 334433211
Q ss_pred chhH-----------HHHHHHHhhcCCCcEEEceEEEEE-----Eeeeccc---ccccCEEEEeeCCCCCCCCCCCCCCC
Q psy4525 64 EVKN-----------VINTFTKTGDNPRVNFYGNICLGQ-----DISLGDL---TNAYHAVVLTYGADNDKKLNIPGEDG 124 (388)
Q Consensus 64 ~~~~-----------~~~~~~~~~~~~~i~~~~~~~v~~-----~~~~~~~---~~~yd~lvlAtG~~~~~~~~i~g~~~ 124 (388)
.... +...+.+.+++.+++++.++.+.. .+...++ ...||+||+|||+.+ +.|+++|.+.
T Consensus 80 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~i~~~~~~v~~~~G~~~~~~~d~lviAtG~~p-~~p~~~g~~~ 158 (468)
T 2qae_A 80 DSAKMQQQKERAVKGLTGGVEYLFKKNKVTYYKGEGSFETAHSIRVNGLDGKQEMLETKKTIIATGSEP-TELPFLPFDE 158 (468)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEEEEETTEEEEEETTSCEEEEEEEEEEECCCEEE-CCBTTBCCCS
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCCEEEEEecCCceEEEEcCEEEECCCCCc-CCCCCCCCCc
Confidence 0111 111223455567888887765432 1322232 348999999999987 4677888766
Q ss_pred CCeeecccccccccCCCCccccCcCCCCCeEEEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEee
Q psy4525 125 KNIISARSFVGWYNGLPEDASLDLSLDCEEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGR 204 (388)
Q Consensus 125 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r 204 (388)
+++++..++... ...+++++|||+|++|+|+|..|. +.+ .+|+++.|
T Consensus 159 ~~v~t~~~~~~~------------~~~~~~vvViGgG~~g~E~A~~l~--------------------~~g-~~Vtlv~~ 205 (468)
T 2qae_A 159 KVVLSSTGALAL------------PRVPKTMVVIGGGVIGLELGSVWA--------------------RLG-AEVTVVEF 205 (468)
T ss_dssp SSEECHHHHHTC------------SSCCSEEEEECCSHHHHHHHHHHH--------------------HTT-CEEEEECS
T ss_pred CceechHHHhhc------------ccCCceEEEECCCHHHHHHHHHHH--------------------HhC-CEEEEEec
Confidence 677777665521 123689999999999999999876 233 57999999
Q ss_pred cCcccccCCHHHHHHHhcCCCceEEecccccccchhhhccccchhhHHHHHH-HhhCCCCCCCCCCceeEEEEecCccee
Q psy4525 205 RGALQVAFTIKEFREMTKLPHVQTVFRNEQLCGVHEASATLARPRKRLTELI-LKTSNPDESKSNCSKYFRPIFLRSPTE 283 (388)
Q Consensus 205 ~~~~~~~~~~~el~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~gv~~~~~~~~~~ 283 (388)
.+.+...+. +++ .+.+.+.+ . +.||++++++.+++
T Consensus 206 ~~~~l~~~d-~~~-------------------------------~~~l~~~l~~------------~~gv~i~~~~~v~~ 241 (468)
T 2qae_A 206 APRCAPTLD-EDV-------------------------------TNALVGALAK------------NEKMKFMTSTKVVG 241 (468)
T ss_dssp SSSSSTTSC-HHH-------------------------------HHHHHHHHHH------------HTCCEEECSCEEEE
T ss_pred CCcccccCC-HHH-------------------------------HHHHHHHHhh------------cCCcEEEeCCEEEE
Confidence 977543322 111 12222333 2 57999999999999
Q ss_pred eeeCCCCceeEEEEccCccccCCceeEEecceEEEccccCCccCC-----CCCcccCCCccccCCCC
Q psy4525 284 FKLNDNGAITGINFANQQALVTEDTELIPSGIAFRSIGYQSRCVD-----SDIPFNEKSCTVIPKEG 345 (388)
Q Consensus 284 i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~p~~~~-----~~l~~~~~~gi~l~~~~ 345 (388)
+..++++ ..+.+.+ ..++.++++||.||+|+|++||+.. .++++++++++.+|+..
T Consensus 242 i~~~~~~--~~v~~~~----~~g~~~~i~~D~vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~ 302 (468)
T 2qae_A 242 GTNNGDS--VSLEVEG----KNGKRETVTCEALLVSVGRRPFTGGLGLDKINVAKNERGFVKIGDHF 302 (468)
T ss_dssp EEECSSS--EEEEEEC----C---EEEEEESEEEECSCEEECCTTSCHHHHTCCBCTTSCBCCCTTS
T ss_pred EEEcCCe--EEEEEEc----CCCceEEEECCEEEECCCcccCCCCCCchhcCCccCCCCCEeECCCc
Confidence 9865422 2333321 0123368999999999999999742 34666655558887653
No 18
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=99.93 E-value=3e-25 Score=208.07 Aligned_cols=244 Identities=17% Similarity=0.233 Sum_probs=166.1
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCC----CCCC---cchhHHHHHHHHhhcCCCcEEEc
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGV----APDH---PEVKNVINTFTKTGDNPRVNFYG 85 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~----~p~~---~~~~~~~~~~~~~~~~~~i~~~~ 85 (388)
.++|+||||||||+++|..|++ .|.+|++||+. .+||.+.+.. .|.+ ....++..++.+.+.+.+++++.
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~--~g~~v~lie~~-~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (320)
T 1trb_A 5 HSKLLILGSGPAGYTAAVYAAR--ANLQPVLITGM-EKGGQLTTTTEVENWPGDPNDLTGPLLMERMHEHATKFETEIIF 81 (320)
T ss_dssp EEEEEEECCSHHHHHHHHHHHT--TTCCCEEECCS-STTGGGGGCSBCCCSTTCCSSCBHHHHHHHHHHHHHHTTCEEEC
T ss_pred cCCEEEECcCHHHHHHHHHHHH--CCCcEEEEccC-CCCceEecchhhhhCCCCCCCCCHHHHHHHHHHHHHHCCCEEEE
Confidence 4799999999999999999999 89999999975 6777664311 1332 24567777777788888999988
Q ss_pred eEEEEEE-----ee-ecc-cccccCEEEEeeCCCCCCCCCCCCCCC---CCeeecccccccccCCCCccccCcCCCCCeE
Q psy4525 86 NICLGQD-----IS-LGD-LTNAYHAVVLTYGADNDKKLNIPGEDG---KNIISARSFVGWYNGLPEDASLDLSLDCEEA 155 (388)
Q Consensus 86 ~~~v~~~-----~~-~~~-~~~~yd~lvlAtG~~~~~~~~i~g~~~---~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~v 155 (388)
++....+ ++ ..+ ....||+||+|||+.+ +.+++||.+. .++.+..... .....+++|
T Consensus 82 ~~v~~i~~~~~~~~v~~~~~~~~~~~lv~AtG~~~-~~~~~~g~~~~~~~~~~~~~~~~------------~~~~~~~~v 148 (320)
T 1trb_A 82 DHINKVDLQNRPFRLNGDNGEYTCDALIIATGASA-RYLGLPSEEAFKGRGVSACATSD------------GFFYRNQKV 148 (320)
T ss_dssp CCEEEEECSSSSEEEEESSCEEEEEEEEECCCEEE-CCCCCHHHHHTBTTTEESCHHHH------------GGGGTTSEE
T ss_pred eeeeEEEecCCEEEEEeCCCEEEcCEEEECCCCCc-CCCCCCChHHhCCceeEecccCC------------ccccCCCeE
Confidence 7643322 11 222 2347999999999877 4667776431 2222211111 112357899
Q ss_pred EEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecCcccccCCHHHHHHHhcCCCceEEeccccc
Q psy4525 156 TILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRGALQVAFTIKEFREMTKLPHVQTVFRNEQL 235 (388)
Q Consensus 156 vVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~~~~~~~~~~el~~l~~~~~~~~~~~~~~~ 235 (388)
+|||+|.+|+|+|..|. ....+|+++.|++.+... +.
T Consensus 149 ~ViG~G~~g~e~A~~l~---------------------~~g~~Vtlv~~~~~~~~~---~~------------------- 185 (320)
T 1trb_A 149 AVIGGGNTAVEEALYLS---------------------NIASEVHLIHRRDGFRAE---KI------------------- 185 (320)
T ss_dssp EEECSSHHHHHHHHHHT---------------------TTSSEEEEECSSSSCCCC---HH-------------------
T ss_pred EEECCCHHHHHHHHHHH---------------------hcCCeEEEEEeCCccccC---HH-------------------
Confidence 99999999999999886 223589999998754211 11
Q ss_pred ccchhhhccccchhhHHHHHHHhhCCCCCCCCCCceeEEEEecCcceeeeeCCCCceeEEEEccCccccC-CceeEEecc
Q psy4525 236 CGVHEASATLARPRKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVT-EDTELIPSG 314 (388)
Q Consensus 236 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~-~~~~~l~~D 314 (388)
..+++.+.+. +.||++++++.++++..++ +.+.++.+.+.. + ++.++++||
T Consensus 186 ------------~~~~l~~~l~------------~~gv~i~~~~~v~~i~~~~-~~v~~v~~~~~~---~~g~~~~i~~D 237 (320)
T 1trb_A 186 ------------LIKRLMDKVE------------NGNIILHTNRTLEEVTGDQ-MGVTGVRLRDTQ---NSDNIESLDVA 237 (320)
T ss_dssp ------------HHHHHHHHHH------------TSSEEEECSCEEEEEEECS-SSEEEEEEECCT---TCCCCEEEECS
T ss_pred ------------HHHHHHHhcc------------cCCeEEEcCceeEEEEcCC-CceEEEEEEecc---CCCceEEEEcC
Confidence 1122222222 5799999999999998653 467777764310 2 445789999
Q ss_pred eEEEccccCCccCC--CCCcccCCCccccCCC
Q psy4525 315 IAFRSIGYQSRCVD--SDIPFNEKSCTVIPKE 344 (388)
Q Consensus 315 ~Vi~a~G~~p~~~~--~~l~~~~~~gi~l~~~ 344 (388)
.||+|+|++|++.. .+++++ ++.+.+|..
T Consensus 238 ~vv~a~G~~p~~~~~~~~l~~~-~G~i~vd~~ 268 (320)
T 1trb_A 238 GLFVAIGHSPNTAIFEGQLELE-NGYIKVQSG 268 (320)
T ss_dssp EEEECSCEEESCGGGTTTSCEE-TTEECCCCS
T ss_pred EEEEEeCCCCChHHhccccccc-CceEEECCC
Confidence 99999999998742 356777 555666654
No 19
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=99.93 E-value=9.7e-25 Score=204.77 Aligned_cols=255 Identities=20% Similarity=0.206 Sum_probs=169.4
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeC--C--CCCC--cchhHHHHHHHHhhcCCCcEEEce
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYG--V--APDH--PEVKNVINTFTKTGDNPRVNFYGN 86 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g--~--~p~~--~~~~~~~~~~~~~~~~~~i~~~~~ 86 (388)
.++|+||||||||+++|..|++ .|.+|+|||+. .+||.+.+. . .|.+ ....++..++.+.+.+.+++++..
T Consensus 16 ~~dvvIIG~G~aGl~aA~~l~~--~g~~v~lie~~-~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 92 (319)
T 3cty_A 16 DFDVVIVGAGAAGFSAAVYAAR--SGFSVAILDKA-VAGGLTAEAPLVENYLGFKSIVGSELAKLFADHAANYAKIREGV 92 (319)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH--TTCCEEEEESS-STTGGGGGCSCBCCBTTBSSBCHHHHHHHHHHHHHTTSEEEETC
T ss_pred CCcEEEECcCHHHHHHHHHHHh--CCCcEEEEeCC-CCCccccccchhhhcCCCcccCHHHHHHHHHHHHHHcCCEEEEe
Confidence 4799999999999999999999 89999999994 677776331 1 1322 234567777778888889988774
Q ss_pred EEEEEE-------eeecccccccCEEEEeeCCCCCCCCCCCCCCC---CCeeecccccccccCCCCccccCcCCCCCeEE
Q psy4525 87 ICLGQD-------ISLGDLTNAYHAVVLTYGADNDKKLNIPGEDG---KNIISARSFVGWYNGLPEDASLDLSLDCEEAT 156 (388)
Q Consensus 87 ~~v~~~-------~~~~~~~~~yd~lvlAtG~~~~~~~~i~g~~~---~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~vv 156 (388)
.....+ +..++....||+||+|||+.+ +.+++||.+. .+++...... .....+++++
T Consensus 93 ~v~~i~~~~~~~~v~~~~~~~~~~~li~AtG~~~-~~~~i~g~~~~~~~~~~~~~~~~------------~~~~~~~~v~ 159 (319)
T 3cty_A 93 EVRSIKKTQGGFDIETNDDTYHAKYVIITTGTTH-KHLGVKGESEYFGKGTSYCSTCD------------GYLFKGKRVV 159 (319)
T ss_dssp CEEEEEEETTEEEEEESSSEEEEEEEEECCCEEE-CCCCCBTTTTTBTTTEESCHHHH------------GGGGBTSEEE
T ss_pred eEEEEEEeCCEEEEEECCCEEEeCEEEECCCCCc-ccCCCCChHHhCCceEEEEEecc------------hhhcCCCeEE
Confidence 333221 223223347999999999877 5777887642 2232111110 1123468999
Q ss_pred EEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecCcccccCCHHHHHHHhcCCCceEEecccccc
Q psy4525 157 ILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRGALQVAFTIKEFREMTKLPHVQTVFRNEQLC 236 (388)
Q Consensus 157 VIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~~~~~~~~~~el~~l~~~~~~~~~~~~~~~~ 236 (388)
|||+|.+|+|+|..|. ....+|++++|++.+... +
T Consensus 160 viG~G~~g~e~a~~l~---------------------~~g~~V~~i~~~~~~~~~---~--------------------- 194 (319)
T 3cty_A 160 TIGGGNSGAIAAISMS---------------------EYVKNVTIIEYMPKYMCE---N--------------------- 194 (319)
T ss_dssp EECCSHHHHHHHHHHT---------------------TTBSEEEEECSSSSCCSC---H---------------------
T ss_pred EECCCHHHHHHHHHHH---------------------hhCCcEEEEEcCCccCCC---H---------------------
Confidence 9999999999999886 234689999988654211 1
Q ss_pred cchhhhccccchhhHHHHHHHhhCCCCCCCCCCceeEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEecceE
Q psy4525 237 GVHEASATLARPRKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPSGIA 316 (388)
Q Consensus 237 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~V 316 (388)
.+.+.+. +.||++++++.++++..+ ++++..+.+.+. ..++..+++||.|
T Consensus 195 --------------~l~~~l~------------~~gv~i~~~~~v~~i~~~-~~~v~~v~~~~~---~~g~~~~i~~D~v 244 (319)
T 3cty_A 195 --------------AYVQEIK------------KRNIPYIMNAQVTEIVGD-GKKVTGVKYKDR---TTGEEKLIETDGV 244 (319)
T ss_dssp --------------HHHHHHH------------HTTCCEECSEEEEEEEES-SSSEEEEEEEET---TTCCEEEECCSEE
T ss_pred --------------HHHHHHh------------cCCcEEEcCCeEEEEecC-CceEEEEEEEEc---CCCceEEEecCEE
Confidence 1111121 468999999999999864 355667766421 1234457999999
Q ss_pred EEccccCCccCC---CCCcccCCCccccCCCCCCeecchhhHHhHH
Q psy4525 317 FRSIGYQSRCVD---SDIPFNEKSCTVIPKEGVPVVTWEGWKAIDK 359 (388)
Q Consensus 317 i~a~G~~p~~~~---~~l~~~~~~gi~l~~~~~~~~~~~~w~~~~~ 359 (388)
|+|+|++||... .++++++++++.+|+... .-..+.|...|+
T Consensus 245 i~a~G~~p~~~~l~~~gl~~~~~g~i~vd~~~~-t~~~~vya~GD~ 289 (319)
T 3cty_A 245 FIYVGLIPQTSFLKDSGVKLDERGYIVVDSRQR-TSVPGVYAAGDV 289 (319)
T ss_dssp EECCCEEECCGGGTTSCCCBCTTSCBCCCTTCB-CSSTTEEECSTT
T ss_pred EEeeCCccChHHHhhccccccCCccEeCCCCCc-cCCCCEEEeecc
Confidence 999999999631 346666666777776532 212244544444
No 20
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=99.93 E-value=1.4e-25 Score=220.55 Aligned_cols=250 Identities=14% Similarity=0.157 Sum_probs=161.2
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCCCCCC----cchhHHHHHHHHhh-cCCCcEEEceE
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDH----PEVKNVINTFTKTG-DNPRVNFYGNI 87 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~~p~~----~~~~~~~~~~~~~~-~~~~i~~~~~~ 87 (388)
+++|+|||||+||+++|..|++..++.+|+|||+++.+++. .++. |.+ ....++..+..+.+ ++.+++++.++
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~-~~~~-p~~~~~~~~~~~~~~~~~~~~~~~~gi~v~~~~ 80 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHA-PCGI-PYVVEGLSTPDKLMYYPPEVFIKKRGIDLHLNA 80 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC--------------------------CTHHHHTTCEEETTC
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccC-CcCC-ccccCCCCCHHHhhhcCHHHHHHhcCcEEEecC
Confidence 47999999999999999999995558999999999876532 2222 222 12233333333333 56789999886
Q ss_pred EEEE------Eeeeccc--ccccCEEEEeeCCCCCCCCCCCCCCCCCeeecccccccccCCCCccccCcCCCCCeEEEEc
Q psy4525 88 CLGQ------DISLGDL--TNAYHAVVLTYGADNDKKLNIPGEDGKNIISARSFVGWYNGLPEDASLDLSLDCEEATILG 159 (388)
Q Consensus 88 ~v~~------~~~~~~~--~~~yd~lvlAtG~~~~~~~~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVIG 159 (388)
.+.. .+...+. ...||+||+|||+.+ +.|++||.+.+++++......... .........+++++|||
T Consensus 81 ~v~~i~~~~~~v~~~~g~~~~~~d~lviAtG~~p-~~p~i~G~~~~~v~~~~~~~~~~~----~~~~~~~~~~~~vvViG 155 (449)
T 3kd9_A 81 EVIEVDTGYVRVRENGGEKSYEWDYLVFANGASP-QVPAIEGVNLKGVFTADLPPDALA----IREYMEKYKVENVVIIG 155 (449)
T ss_dssp EEEEECSSEEEEECSSSEEEEECSEEEECCCEEE-CCCSCBTTTSTTEECSCSTHHHHH----HHHHHSSSCCCEEEEEC
T ss_pred EEEEEecCCCEEEECCceEEEEcCEEEECCCCCC-CCCCCCCCCCCCEEEeCCHHHHHH----HHHHHHhcCCCeEEEEC
Confidence 5531 2333333 347999999999987 578899988888876654432111 00001123578999999
Q ss_pred CChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecCcccccCCHHHHHHHhcCCCceEEecccccccch
Q psy4525 160 QGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRGALQVAFTIKEFREMTKLPHVQTVFRNEQLCGVH 239 (388)
Q Consensus 160 gG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~~~~~~~~~~el~~l~~~~~~~~~~~~~~~~~~~ 239 (388)
+|++|+|+|..|. +.+ .+|+++.|.+.+.....++++.+
T Consensus 156 gG~~g~E~A~~l~--------------------~~g-~~Vtlv~~~~~~l~~~~~~~~~~-------------------- 194 (449)
T 3kd9_A 156 GGYIGIEMAEAFA--------------------AQG-KNVTMIVRGERVLRRSFDKEVTD-------------------- 194 (449)
T ss_dssp CSHHHHHHHHHHH--------------------HTT-CEEEEEESSSSTTTTTSCHHHHH--------------------
T ss_pred CCHHHHHHHHHHH--------------------hCC-CeEEEEEcCCccchhhcCHHHHH--------------------
Confidence 9999999999876 233 57999999987654422222211
Q ss_pred hhhccccchhhHHHHHHHhhCCCCCCCCCCceeEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEecceEEEc
Q psy4525 240 EASATLARPRKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPSGIAFRS 319 (388)
Q Consensus 240 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a 319 (388)
.+.+.+ .+. |++++++.+.++..+ +.+..+. .++++++||.||+|
T Consensus 195 -----------~l~~~l------------~~~-v~i~~~~~v~~i~~~--~~v~~v~---------~~g~~i~~D~Vv~a 239 (449)
T 3kd9_A 195 -----------ILEEKL------------KKH-VNLRLQEITMKIEGE--ERVEKVV---------TDAGEYKAELVILA 239 (449)
T ss_dssp -----------HHHHHH------------TTT-SEEEESCCEEEEECS--SSCCEEE---------ETTEEEECSEEEEC
T ss_pred -----------HHHHHH------------HhC-cEEEeCCeEEEEecc--CcEEEEE---------eCCCEEECCEEEEe
Confidence 111222 145 999999999999753 3443332 23358999999999
Q ss_pred cccCCccC---CCCCcccCCCccccCCCC
Q psy4525 320 IGYQSRCV---DSDIPFNEKSCTVIPKEG 345 (388)
Q Consensus 320 ~G~~p~~~---~~~l~~~~~~gi~l~~~~ 345 (388)
+|++|++. ..++++++++++.+|+..
T Consensus 240 ~G~~p~~~l~~~~gl~~~~~G~i~vd~~~ 268 (449)
T 3kd9_A 240 TGIKPNIELAKQLGVRIGETGAIWTNEKM 268 (449)
T ss_dssp SCEEECCHHHHHTTCCBCTTSSBCCCTTC
T ss_pred eCCccCHHHHHhCCccCCCCCCEEECCCC
Confidence 99999973 246777776678877643
No 21
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=99.93 E-value=1.6e-24 Score=202.36 Aligned_cols=241 Identities=19% Similarity=0.226 Sum_probs=165.7
Q ss_pred CcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceee--CCC--C--CCcchhHHHHHHHHhhcCCCcEEEceE
Q psy4525 14 PNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRY--GVA--P--DHPEVKNVINTFTKTGDNPRVNFYGNI 87 (388)
Q Consensus 14 ~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~--g~~--p--~~~~~~~~~~~~~~~~~~~~i~~~~~~ 87 (388)
++|+||||||||+++|..|++ .|.+|+|||+ .+||.|.. +.. + .+....++..++.+.+++.+++++.++
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~--~g~~v~li~~--~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 77 (310)
T 1fl2_A 2 YDVLIVGSGPAGAAAAIYSAR--KGIRTGLMGE--RFGGQILDTVDIENYISVPKTEGQKLAGALKVHVDEYDVDVIDSQ 77 (310)
T ss_dssp EEEEEECCSHHHHHHHHHHHT--TTCCEEEECS--STTGGGGGCCEECCBTTBSSEEHHHHHHHHHHHHHTSCEEEECSC
T ss_pred CCEEEECcCHHHHHHHHHHHH--CCCcEEEEeC--CCCceeccccccccccCcCCCCHHHHHHHHHHHHHHcCCeEEccC
Confidence 689999999999999999999 8999999986 46777642 220 1 122356777788888888899998875
Q ss_pred EEE-E----------Eeeeccc-ccccCEEEEeeCCCCCCCCCCCCCCC---CCeeecccccccccCCCCccccCcCCCC
Q psy4525 88 CLG-Q----------DISLGDL-TNAYHAVVLTYGADNDKKLNIPGEDG---KNIISARSFVGWYNGLPEDASLDLSLDC 152 (388)
Q Consensus 88 ~v~-~----------~~~~~~~-~~~yd~lvlAtG~~~~~~~~i~g~~~---~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (388)
.+. . .+..++. ...||+||+|||+.+ +.+++||.+. ..++...... .....+
T Consensus 78 ~v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~-~~~~~~g~~~~~~~~~~~~~~~~------------~~~~~~ 144 (310)
T 1fl2_A 78 SASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAKW-RNMNVPGEDQYRTKGVTYCPHCD------------GPLFKG 144 (310)
T ss_dssp CEEEEECCSSTTCCEEEEETTSCEEEEEEEEECCCEEE-CCCCCTTTTTTBTTTEESCHHHH------------GGGGBT
T ss_pred EEEEEEecccCCceEEEEECCCCEEEeCEEEECcCCCc-CCCCCCChhhcccceeEEeccCc------------HhhcCC
Confidence 432 1 2233333 347999999999987 4677888642 2222111110 122347
Q ss_pred CeEEEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecCcccccCCHHHHHHHhcCCCceEEecc
Q psy4525 153 EEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRGALQVAFTIKEFREMTKLPHVQTVFRN 232 (388)
Q Consensus 153 ~~vvVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~~~~~~~~~~el~~l~~~~~~~~~~~~ 232 (388)
++|+|||+|++|+|+|..|+ ....+|+++.|++.+. +. +
T Consensus 145 ~~v~VvG~G~~g~e~A~~l~---------------------~~g~~Vtlv~~~~~~~--~~-~----------------- 183 (310)
T 1fl2_A 145 KRVAVIGGGNSGVEAAIDLA---------------------GIVEHVTLLEFAPEMK--AD-Q----------------- 183 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHH---------------------TTBSEEEEECSSSSCC--SC-H-----------------
T ss_pred CEEEEECCCHHHHHHHHHHH---------------------HhCCEEEEEEeCcccC--cc-H-----------------
Confidence 89999999999999999886 3346899999987642 11 1
Q ss_pred cccccchhhhccccchhhHHHHHHHhhCCCCCCCCCCceeEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEe
Q psy4525 233 EQLCGVHEASATLARPRKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIP 312 (388)
Q Consensus 233 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~ 312 (388)
.+.+.+. ...||++++++.++++..+ ++++..+++.+. .+++..+++
T Consensus 184 ------------------~~~~~l~-----------~~~gv~v~~~~~v~~i~~~-~~~v~~v~~~~~---~~g~~~~i~ 230 (310)
T 1fl2_A 184 ------------------VLQDKLR-----------SLKNVDIILNAQTTEVKGD-GSKVVGLEYRDR---VSGDIHNIE 230 (310)
T ss_dssp ------------------HHHHHHH-----------TCTTEEEESSEEEEEEEES-SSSEEEEEEEET---TTCCEEEEE
T ss_pred ------------------HHHHHHh-----------hCCCeEEecCCceEEEEcC-CCcEEEEEEEEC---CCCcEEEEE
Confidence 1111111 1268999999999999864 367777776542 134446899
Q ss_pred cceEEEccccCCccC--CCCCcccCCCccccCCCC
Q psy4525 313 SGIAFRSIGYQSRCV--DSDIPFNEKSCTVIPKEG 345 (388)
Q Consensus 313 ~D~Vi~a~G~~p~~~--~~~l~~~~~~gi~l~~~~ 345 (388)
+|.||+|+|++||+. ...+.+++.+++.+|+..
T Consensus 231 ~D~vi~a~G~~p~~~~l~~~l~~~~~g~i~vd~~~ 265 (310)
T 1fl2_A 231 LAGIFVQIGLLPNTNWLEGAVERNRMGEIIIDAKC 265 (310)
T ss_dssp CSEEEECSCEEESCGGGTTTSCBCTTSCBCCCTTC
T ss_pred cCEEEEeeCCccCchHHhccccccCCCcEEcCCCC
Confidence 999999999999862 223566666677777654
No 22
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.93 E-value=7.6e-25 Score=215.76 Aligned_cols=244 Identities=13% Similarity=0.209 Sum_probs=162.7
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCce-eeCCCCCC--------------------------cch
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLV-RYGVAPDH--------------------------PEV 65 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~-~~g~~p~~--------------------------~~~ 65 (388)
.++|+||||||||+++|..|++ .|.+|+|||+. .+||.| ++++.|.. ...
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~--~g~~V~lie~~-~~gG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~ 79 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQ--LGQKVTIVEKG-NLGGVCLNVGCIPSKALISASHRYEQAKHSEEMGIKAENVTIDF 79 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHH--TTCCEEEEESS-CTTHHHHHTSHHHHHHHHHHHHHHHHHHTCGGGTEECCSCEECH
T ss_pred cCCEEEECCCHHHHHHHHHHHh--CCCeEEEEECC-CCCCcCcCcCchhhHHHHHHHHHHHHHHHHHhcCcccCCCccCH
Confidence 3799999999999999999999 89999999998 777765 33332211 001
Q ss_pred hH-----------HHHHHHHhhcCCCcEEEceEEEEE-----Eeeeccc--ccccCEEEEeeCCCCCCCCCCCCCCCCCe
Q psy4525 66 KN-----------VINTFTKTGDNPRVNFYGNICLGQ-----DISLGDL--TNAYHAVVLTYGADNDKKLNIPGEDGKNI 127 (388)
Q Consensus 66 ~~-----------~~~~~~~~~~~~~i~~~~~~~v~~-----~~~~~~~--~~~yd~lvlAtG~~~~~~~~i~g~~~~~v 127 (388)
.. +...+.+.+++.+++++.++.+.. .+...+. ...||+||+|||+.+ +.++++|.+.. +
T Consensus 80 ~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~id~~~v~V~~~~G~~~i~~d~lViATGs~p-~~~~~~g~~~~-v 157 (455)
T 1ebd_A 80 AKVQEWKASVVKKLTGGVEGLLKGNKVEIVKGEAYFVDANTVRVVNGDSAQTYTFKNAIIATGSRP-IELPNFKFSNR-I 157 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTTCEEEESEEEEEETTEEEEEETTEEEEEECSEEEECCCEEE-CCBTTBCCCSS-E
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCeEEEEeCCCcEEEEeCEEEEecCCCC-CCCCCCCccce-E
Confidence 11 222345566778999987765432 1322222 348999999999987 46777776532 5
Q ss_pred eecccccccccCCCCccccCcCCCCCeEEEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecCc
Q psy4525 128 ISARSFVGWYNGLPEDASLDLSLDCEEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRGA 207 (388)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~~ 207 (388)
++..++.. ....+++++|||+|.+|+|+|..|. +.+ .+|+++.|.+.
T Consensus 158 ~~~~~~~~------------~~~~~~~vvViGgG~~g~e~A~~l~--------------------~~g-~~Vtlv~~~~~ 204 (455)
T 1ebd_A 158 LDSTGALN------------LGEVPKSLVVIGGGYIGIELGTAYA--------------------NFG-TKVTILEGAGE 204 (455)
T ss_dssp ECHHHHHT------------CSSCCSEEEEECCSHHHHHHHHHHH--------------------HTT-CEEEEEESSSS
T ss_pred ecHHHHhc------------cccCCCeEEEECCCHHHHHHHHHHH--------------------HcC-CcEEEEEcCCc
Confidence 55544431 1123689999999999999999876 233 47999999876
Q ss_pred ccccCCHHHHHHHhcCCCceEEecccccccchhhhccccchhhHHHHHHHhhCCCCCCCCCCceeEEEEecCcceeeeeC
Q psy4525 208 LQVAFTIKEFREMTKLPHVQTVFRNEQLCGVHEASATLARPRKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTEFKLN 287 (388)
Q Consensus 208 ~~~~~~~~el~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~ 287 (388)
+...+. +++ .+.+.+.+. +.||++++++.++++..+
T Consensus 205 ~l~~~~-~~~-------------------------------~~~l~~~l~------------~~gv~i~~~~~v~~i~~~ 240 (455)
T 1ebd_A 205 ILSGFE-KQM-------------------------------AAIIKKRLK------------KKGVEVVTNALAKGAEER 240 (455)
T ss_dssp SSTTSC-HHH-------------------------------HHHHHHHHH------------HTTCEEEESEEEEEEEEE
T ss_pred cccccC-HHH-------------------------------HHHHHHHHH------------HCCCEEEeCCEEEEEEEe
Confidence 543221 111 112222222 578999999999999864
Q ss_pred CCCceeEEEEccCccccCCceeEEecceEEEccccCCccCC-----CCCcccCCCccccCCCC
Q psy4525 288 DNGAITGINFANQQALVTEDTELIPSGIAFRSIGYQSRCVD-----SDIPFNEKSCTVIPKEG 345 (388)
Q Consensus 288 ~~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~p~~~~-----~~l~~~~~~gi~l~~~~ 345 (388)
+ +. ..+.+.+ .++++++++|.||+|+|++||+.. .++++++++.+.+|+..
T Consensus 241 ~-~~-~~v~~~~-----~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~~~ 296 (455)
T 1ebd_A 241 E-DG-VTVTYEA-----NGETKTIDADYVLVTVGRRPNTDELGLEQIGIKMTNRGLIEVDQQC 296 (455)
T ss_dssp T-TE-EEEEEEE-----TTEEEEEEESEEEECSCEEESCSSSSTTTTTCCBCTTSCBCCCTTC
T ss_pred C-Ce-EEEEEEe-----CCceeEEEcCEEEECcCCCcccCcCChhhcCCccCCCCCEeeCCCc
Confidence 3 22 2333321 345678999999999999999731 34566655557777653
No 23
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=99.93 E-value=8.6e-25 Score=204.54 Aligned_cols=255 Identities=17% Similarity=0.208 Sum_probs=156.9
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCce-eeCCCCC---Cc--chhHHHHHHHHhhcCCCcEEEce
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLV-RYGVAPD---HP--EVKNVINTFTKTGDNPRVNFYGN 86 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~-~~g~~p~---~~--~~~~~~~~~~~~~~~~~i~~~~~ 86 (388)
.+||+||||||||++||..|++ .|++|+|||+. .+||.+ ++++.+. +. ...++.........+.+..+..+
T Consensus 6 ~yDvvIIG~GpAGl~aA~~l~~--~g~~V~liE~~-~~gG~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (312)
T 4gcm_A 6 DFDIAIIGAGPAGMTAAVYASR--ANLKTVMIERG-IPGGQMANTEEVENFPGFEMITGPDLSTKMFEHAKKFGAVYQYG 82 (312)
T ss_dssp SEEEEEECCSHHHHHHHHHHHH--TTCCEEEEESS-CTTGGGGGCSCBCCSTTCSSBCHHHHHHHHHHHHHHTTCEEEEC
T ss_pred CCCEEEECCCHHHHHHHHHHHH--CCCCEEEEecC-CCCCeeecccccCCcCCccccchHHHHHHHHHHHhhccccccce
Confidence 5899999999999999999999 89999999986 677776 4454433 32 24455555555555555555543
Q ss_pred EEEEE-------EeeecccccccCEEEEeeCCCCCCCCCCCCCCCC---CeeecccccccccCCCCccccCcCCCCCeEE
Q psy4525 87 ICLGQ-------DISLGDLTNAYHAVVLTYGADNDKKLNIPGEDGK---NIISARSFVGWYNGLPEDASLDLSLDCEEAT 156 (388)
Q Consensus 87 ~~v~~-------~~~~~~~~~~yd~lvlAtG~~~~~~~~i~g~~~~---~v~~~~~~~~~~~~~~~~~~~~~~~~~~~vv 156 (388)
..... .+..+..+..||+||||||+.+ +.|++||.+.. ++.+..... .....+|+|+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~d~liiAtGs~~-~~~~ipG~~~~~~~~v~~~~~~~------------~~~~~~k~vv 149 (312)
T 4gcm_A 83 DIKSVEDKGEYKVINFGNKELTAKAVIIATGAEY-KKIGVPGEQELGGRGVSYCAVCD------------GAFFKNKRLF 149 (312)
T ss_dssp CCCEEEECSSCEEEECSSCEEEEEEEEECCCEEE-CCCCCTTTTTTBTTTEESCHHHH------------GGGGTTCEEE
T ss_pred eeeeeeeeecceeeccCCeEEEeceeEEcccCcc-CcCCCCChhhhCCccEEeeeccC------------ccccCCCEEE
Confidence 32211 1222333347999999999988 68899997631 222111110 2234579999
Q ss_pred EEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecCcccccCCHHHHHHHhcCCCceEEecccccc
Q psy4525 157 ILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRGALQVAFTIKEFREMTKLPHVQTVFRNEQLC 236 (388)
Q Consensus 157 VIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~~~~~~~~~~el~~l~~~~~~~~~~~~~~~~ 236 (388)
|||||++|+|+|..|+ ....+||+++|++.+.......+
T Consensus 150 ViGgG~ig~E~A~~l~---------------------~~g~~Vtlv~~~~~~~~~~~~~~-------------------- 188 (312)
T 4gcm_A 150 VIGGGDSAVEEGTFLT---------------------KFADKVTIVHRRDELRAQRILQD-------------------- 188 (312)
T ss_dssp EECCSHHHHHHHHHHT---------------------TTCSEEEEECSSSSCCSCHHHHH--------------------
T ss_pred EECCCHHHHHHHHHHH---------------------hcCCEEEEEecccccCcchhHHH--------------------
Confidence 9999999999999886 34468999999876543211000
Q ss_pred cchhhhccccchhhHHHHHHHhhCCCCCCCCCCceeEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEecceE
Q psy4525 237 GVHEASATLARPRKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPSGIA 316 (388)
Q Consensus 237 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~V 316 (388)
..+ ...++..............+ .......... ...+++..+++|.|
T Consensus 189 -----------------~~~------------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---~~~~~~~~~~~d~v 235 (312)
T 4gcm_A 189 -----------------RAF------------KNDKIDFIWSHTLKSINEKD-GKVGSVTLTS---TKDGSEETHEADGV 235 (312)
T ss_dssp -----------------HHH------------HCTTEEEECSEEEEEEEEET-TEEEEEEEEE---TTTCCEEEEECSEE
T ss_pred -----------------HHH------------HhcCcceeeecceeeeeccc-cccccceeee---ecCCceeEEeeeeE
Confidence 001 13445555554444444321 2222222111 23567789999999
Q ss_pred EEccccCCccCC---CCCcccCCCccccCCCCCCeecchhhHHhHH
Q psy4525 317 FRSIGYQSRCVD---SDIPFNEKSCTVIPKEGVPVVTWEGWKAIDK 359 (388)
Q Consensus 317 i~a~G~~p~~~~---~~l~~~~~~gi~l~~~~~~~~~~~~w~~~~~ 359 (388)
++++|++|+... .++ .+++++|++|+.....+ .+.|...|+
T Consensus 236 ~~~~g~~~~~~~~~~~g~-~~~~G~I~vd~~~~Ts~-pgIyA~GDv 279 (312)
T 4gcm_A 236 FIYIGMKPLTAPFKDLGI-TNDVGYIVTKDDMTTSV-PGIFAAGDV 279 (312)
T ss_dssp EECSCEEESCGGGGGGTC-BCTTSCBCCCTTSBCSS-TTEEECSTT
T ss_pred EeecCCCcCchhHHhcce-ecCCCeEeeCCCCccCC-CCEEEEeec
Confidence 999999998742 222 23344577776553222 244555553
No 24
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.93 E-value=1.7e-25 Score=221.36 Aligned_cols=250 Identities=13% Similarity=0.165 Sum_probs=166.5
Q ss_pred CCCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCce-eeCCCCCCc--------------------------
Q psy4525 11 QLKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLV-RYGVAPDHP-------------------------- 63 (388)
Q Consensus 11 ~~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~-~~g~~p~~~-------------------------- 63 (388)
...++|+||||||||+++|..|++ .|.+|+|||+.+.+||.| ++++.|...
T Consensus 4 ~~~~dvvIIGaG~aGl~aA~~l~~--~g~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~~g~~~~~~~ 81 (470)
T 1dxl_A 4 SDENDVVIIGGGPGGYVAAIKAAQ--LGFKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKVSNVE 81 (470)
T ss_dssp CCCCCEEEECCSHHHHHHHHHHHH--HTCCEEEEECSSSSCCSHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEEESCEE
T ss_pred CccCCEEEECCCHHHHHHHHHHHH--CCCeEEEEeCCCCccccccCcCccchHHHHHHHHHHHHHHHHHHhcCcccCCCc
Confidence 346899999999999999999999 799999999998888876 334333210
Q ss_pred -chhH-----------HHHHHHHhhcCCCcEEEceEEEEE-----Eeeeccc---ccccCEEEEeeCCCCCCCCCCCCCC
Q psy4525 64 -EVKN-----------VINTFTKTGDNPRVNFYGNICLGQ-----DISLGDL---TNAYHAVVLTYGADNDKKLNIPGED 123 (388)
Q Consensus 64 -~~~~-----------~~~~~~~~~~~~~i~~~~~~~v~~-----~~~~~~~---~~~yd~lvlAtG~~~~~~~~i~g~~ 123 (388)
.... +...+.+.+++.+++++.++.+.. .+...++ ...||+||+|||+.+ +.++++|.+
T Consensus 82 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~~~v~~~~G~~~~i~~d~lIiAtGs~p-~~p~~~g~~ 160 (470)
T 1dxl_A 82 IDLAAMMGQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFVSPSEISVDTIEGENTVVKGKHIIIATGSDV-KSLPGVTID 160 (470)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEEEETTEEEECCSSSCCEEEECSEEEECCCEEE-CCBTTBCCC
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCEEEEEeCCCceEEEEcCEEEECCCCCC-CCCCCCCCC
Confidence 0111 111223445556888887765432 1222222 348999999999987 477788876
Q ss_pred CCCeeecccccccccCCCCccccCcCCCCCeEEEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEe
Q psy4525 124 GKNIISARSFVGWYNGLPEDASLDLSLDCEEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVG 203 (388)
Q Consensus 124 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~ 203 (388)
.+++++..++... ...+++++|||+|++|+|+|..|. +.+ .+|++++
T Consensus 161 ~~~v~~~~~~~~~------------~~~~~~vvViGgG~~g~e~A~~l~--------------------~~g-~~Vtli~ 207 (470)
T 1dxl_A 161 EKKIVSSTGALAL------------SEIPKKLVVIGAGYIGLEMGSVWG--------------------RIG-SEVTVVE 207 (470)
T ss_dssp SSSEECHHHHTTC------------SSCCSEEEESCCSHHHHHHHHHHH--------------------HHT-CEEEEEC
T ss_pred cccEEeHHHhhhh------------hhcCCeEEEECCCHHHHHHHHHHH--------------------HcC-CcEEEEE
Confidence 5567766655421 123689999999999999999876 123 4799999
Q ss_pred ecCcccccCCHHHHHHHhcCCCceEEecccccccchhhhccccchhhHHHHHHHhhCCCCCCCCCCceeEEEEecCccee
Q psy4525 204 RRGALQVAFTIKEFREMTKLPHVQTVFRNEQLCGVHEASATLARPRKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTE 283 (388)
Q Consensus 204 r~~~~~~~~~~~el~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~ 283 (388)
|.+.+...+. +++. +.+.+.+. +.||++++++.+++
T Consensus 208 ~~~~~l~~~~-~~~~-------------------------------~~l~~~l~------------~~gv~i~~~~~v~~ 243 (470)
T 1dxl_A 208 FASEIVPTMD-AEIR-------------------------------KQFQRSLE------------KQGMKFKLKTKVVG 243 (470)
T ss_dssp SSSSSSTTSC-HHHH-------------------------------HHHHHHHH------------HSSCCEECSEEEEE
T ss_pred cCCccccccc-HHHH-------------------------------HHHHHHHH------------HcCCEEEeCCEEEE
Confidence 9976543222 1211 12222222 57999999999999
Q ss_pred eeeCCCCceeEEEEccCccccCCceeEEecceEEEccccCCccCC-----CCCcccCCCccccCCCC
Q psy4525 284 FKLNDNGAITGINFANQQALVTEDTELIPSGIAFRSIGYQSRCVD-----SDIPFNEKSCTVIPKEG 345 (388)
Q Consensus 284 i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~p~~~~-----~~l~~~~~~gi~l~~~~ 345 (388)
+..++++ ..+.+.+. ..++++++++|.||+|+|++||+.. .++++++++++.+|+..
T Consensus 244 i~~~~~~--~~v~~~~~---~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~~ 305 (470)
T 1dxl_A 244 VDTSGDG--VKLTVEPS---AGGEQTIIEADVVLVSAGRTPFTSGLNLDKIGVETDKLGRILVNERF 305 (470)
T ss_dssp EECSSSS--EEEEEEES---SSCCCEEEEESEEECCCCEEECCTTSCCTTTTCCBCSSSCBCCCTTC
T ss_pred EEEcCCe--EEEEEEec---CCCcceEEECCEEEECCCCCcCCCCCCchhcCCccCCCCCEeECcCC
Confidence 9864322 23433210 0234478999999999999999732 34566655558877653
No 25
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=99.93 E-value=4.3e-26 Score=221.69 Aligned_cols=246 Identities=17% Similarity=0.173 Sum_probs=162.3
Q ss_pred CcEEEECccHHHHHHHHHHHhhCCCCc--EEEEcCCCCCCCc---eeeCCCCCCcchhHHHHHHHHhhcCCCcEEEceEE
Q psy4525 14 PNVCIVGSGPAGFYCAQQILKLLPQST--VDIYEKLPVPFGL---VRYGVAPDHPEVKNVINTFTKTGDNPRVNFYGNIC 88 (388)
Q Consensus 14 ~~vvIIGaG~aGl~aA~~l~~~~~g~~--v~lie~~~~~gg~---~~~g~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 88 (388)
++|+|||||+||+++|..|++ .+.+ |++||+++.++.. +...+.........+ ....+++.+.+++++.++.
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~--~g~~~~V~li~~~~~~~y~~~~l~~~~~~g~~~~~~~-~~~~~~~~~~~i~~~~~~~ 79 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRA--EGFEGRISLIGDEPHLPYDRPSLSKAVLDGSLERPPI-LAEADWYGEARIDMLTGPE 79 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--TTCCSEEEEEECSSSSSBCSGGGGTHHHHTSSSSCCB-SSCTTHHHHTTCEEEESCC
T ss_pred CCEEEEcccHHHHHHHHHHHc--cCcCCeEEEEECCCCCCcCCccccHHHhCCCCCHHHh-cCCHHHHHHCCCEEEeCCE
Confidence 589999999999999999999 6766 9999998765321 100000000001111 1122334456899988855
Q ss_pred EEE------Eeeeccc-ccccCEEEEeeCCCCCCCCCCCCCCCCCeeecccccccccCCCCccccCcCCCCCeEEEEcCC
Q psy4525 89 LGQ------DISLGDL-TNAYHAVVLTYGADNDKKLNIPGEDGKNIISARSFVGWYNGLPEDASLDLSLDCEEATILGQG 161 (388)
Q Consensus 89 v~~------~~~~~~~-~~~yd~lvlAtG~~~~~~~~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVIGgG 161 (388)
+.. .+.+.+. ...||+||+|||+.+ +.+++||.+.+++++.+++..... .. .....+++++|||+|
T Consensus 80 v~~id~~~~~v~~~~g~~~~~d~lvlAtG~~p-~~~~ipG~~~~~v~~~~~~~d~~~----l~--~~~~~~~~vvViGgG 152 (410)
T 3ef6_A 80 VTALDVQTRTISLDDGTTLSADAIVIATGSRA-RTMALPGSQLPGVVTLRTYGDVQV----LR--DSWTSATRLLIVGGG 152 (410)
T ss_dssp EEEEETTTTEEEETTSCEEECSEEEECCCEEE-CCCCCTTTTSTTEECCCSHHHHHH----HH--HHCCTTCEEEEECCS
T ss_pred EEEEECCCCEEEECCCCEEECCEEEEccCCcc-cCCCCCCccccceEEeccHHHHHH----HH--HHhccCCeEEEECCC
Confidence 432 2444444 348999999999987 578899988888887655442111 00 112347999999999
Q ss_pred hHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecCcccccCCHHHHHHHhcCCCceEEecccccccchhh
Q psy4525 162 NVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRGALQVAFTIKEFREMTKLPHVQTVFRNEQLCGVHEA 241 (388)
Q Consensus 162 ~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~~~~~~~~~~el~~l~~~~~~~~~~~~~~~~~~~~~ 241 (388)
++|+|+|..|. +.+ .+|+++.+.+.+.....++++
T Consensus 153 ~~g~E~A~~l~--------------------~~g-~~Vtvv~~~~~~l~~~~~~~~------------------------ 187 (410)
T 3ef6_A 153 LIGCEVATTAR--------------------KLG-LSVTILEAGDELLVRVLGRRI------------------------ 187 (410)
T ss_dssp HHHHHHHHHHH--------------------HTT-CEEEEECSSSSSSHHHHCHHH------------------------
T ss_pred HHHHHHHHHHH--------------------hCC-CeEEEEecCCccchhhcCHHH------------------------
Confidence 99999999776 233 579999998765422111111
Q ss_pred hccccchhhHHHHHHHhhCCCCCCCCCCceeEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEecceEEEccc
Q psy4525 242 SATLARPRKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPSGIAFRSIG 321 (388)
Q Consensus 242 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G 321 (388)
.+.+.+.+. +.||+++++..++++..+ +.+..+++ .++++++||.||+|+|
T Consensus 188 -------~~~l~~~l~------------~~GV~i~~~~~v~~i~~~--~~~~~v~~--------~dg~~i~aD~Vv~a~G 238 (410)
T 3ef6_A 188 -------GAWLRGLLT------------ELGVQVELGTGVVGFSGE--GQLEQVMA--------SDGRSFVADSALICVG 238 (410)
T ss_dssp -------HHHHHHHHH------------HHTCEEECSCCEEEEECS--SSCCEEEE--------TTSCEEECSEEEECSC
T ss_pred -------HHHHHHHHH------------HCCCEEEeCCEEEEEecc--CcEEEEEE--------CCCCEEEcCEEEEeeC
Confidence 112222222 679999999999999853 45556654 3456899999999999
Q ss_pred cCCccC---CCCCcccCCCccccCCCC
Q psy4525 322 YQSRCV---DSDIPFNEKSCTVIPKEG 345 (388)
Q Consensus 322 ~~p~~~---~~~l~~~~~~gi~l~~~~ 345 (388)
++|+.. ..++.++ +|+.+|+..
T Consensus 239 ~~p~~~l~~~~gl~~~--~gi~vd~~~ 263 (410)
T 3ef6_A 239 AEPADQLARQAGLACD--RGVIVDHCG 263 (410)
T ss_dssp EEECCHHHHHTTCCBS--SSEECCTTS
T ss_pred CeecHHHHHhCCCccC--CeEEEccCe
Confidence 999973 2456665 578887654
No 26
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.93 E-value=9.8e-25 Score=205.98 Aligned_cols=247 Identities=15% Similarity=0.191 Sum_probs=165.6
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCC-------CCCCc--chhHHHHHHHHhhcCCCcEE
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGV-------APDHP--EVKNVINTFTKTGDNPRVNF 83 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~-------~p~~~--~~~~~~~~~~~~~~~~~i~~ 83 (388)
.++|+||||||||+++|..|++ .+.+|+|||+.+.+||.|.... .|.++ ...++..++.+.+.++++++
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~--~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 82 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGM--RGLSFRFVDPLPEPGGQLTALYPEKYIYDVAGFPKVYAKDLVKGLVEQVAPFNPVY 82 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH--TTCCEEEEESSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHGGGCCEE
T ss_pred cCcEEEECCCHHHHHHHHHHHh--CCCCEEEEeCCCCCCCeeeccCCCceeeccCCCCCCCHHHHHHHHHHHHHHcCCEE
Confidence 4799999999999999999999 8999999999988988773211 02222 35677777888888888888
Q ss_pred EceEEEEE--------Eeeeccc-ccccCEEEEeeCCCC--CCCCCCCCCCCCCeeecccccccccCCCCccccCcCCCC
Q psy4525 84 YGNICLGQ--------DISLGDL-TNAYHAVVLTYGADN--DKKLNIPGEDGKNIISARSFVGWYNGLPEDASLDLSLDC 152 (388)
Q Consensus 84 ~~~~~v~~--------~~~~~~~-~~~yd~lvlAtG~~~--~~~~~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (388)
+.++.+.. .+...+. ...||+||+|||+.+ ++.++++|.+. +....+...+. + .....+
T Consensus 83 ~~~~~v~~i~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~p~~~~i~g~~~---~~~~~~~~~~~---~----~~~~~~ 152 (335)
T 2zbw_A 83 SLGERAETLEREGDLFKVTTSQGNAYTAKAVIIAAGVGAFEPRRIGAPGERE---FEGRGVYYAVK---S----KAEFQG 152 (335)
T ss_dssp EESCCEEEEEEETTEEEEEETTSCEEEEEEEEECCTTSEEEECCCCCTTTTT---TBTTTEESSCS---C----GGGGTT
T ss_pred EeCCEEEEEEECCCEEEEEECCCCEEEeCEEEECCCCCCCCCCCCCCCChhh---ccCcEEEEecC---c----hhhcCC
Confidence 77655432 1333333 347999999999842 24667777642 11111110000 1 112357
Q ss_pred CeEEEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecCcccccCCHHHHHHHhcCCCceEEecc
Q psy4525 153 EEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRGALQVAFTIKEFREMTKLPHVQTVFRN 232 (388)
Q Consensus 153 ~~vvVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~~~~~~~~~~el~~l~~~~~~~~~~~~ 232 (388)
++|+|||+|.+|+|+|..|. ....+|+++.|++.+... ++
T Consensus 153 ~~v~viG~G~~g~e~a~~l~---------------------~~g~~V~~v~~~~~~~~~---~~---------------- 192 (335)
T 2zbw_A 153 KRVLIVGGGDSAVDWALNLL---------------------DTARRITLIHRRPQFRAH---EA---------------- 192 (335)
T ss_dssp CEEEEECSSHHHHHHHHHTT---------------------TTSSEEEEECSSSSCCSC---HH----------------
T ss_pred CEEEEECCCHHHHHHHHHHH---------------------hhCCEEEEEEcCCccCcc---HH----------------
Confidence 99999999999999999886 224579999998764221 01
Q ss_pred cccccchhhhccccchhhHHHHHHHhhCCCCCCCCCCceeEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEe
Q psy4525 233 EQLCGVHEASATLARPRKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIP 312 (388)
Q Consensus 233 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~ 312 (388)
..+++.+.+. +.||+++++..++++.. ++.+..+.+... ..++.++++
T Consensus 193 ---------------~~~~l~~~l~------------~~gv~v~~~~~v~~i~~--~~~~~~v~~~~~---~~g~~~~i~ 240 (335)
T 2zbw_A 193 ---------------SVKELMKAHE------------EGRLEVLTPYELRRVEG--DERVRWAVVFHN---QTQEELALE 240 (335)
T ss_dssp ---------------HHHHHHHHHH------------TTSSEEETTEEEEEEEE--SSSEEEEEEEET---TTCCEEEEE
T ss_pred ---------------HHHHHHhccc------------cCCeEEecCCcceeEcc--CCCeeEEEEEEC---CCCceEEEe
Confidence 1122222222 56999999999999986 356666666421 023447899
Q ss_pred cceEEEccccCCccC-C--CCCcccCCCccccCCC
Q psy4525 313 SGIAFRSIGYQSRCV-D--SDIPFNEKSCTVIPKE 344 (388)
Q Consensus 313 ~D~Vi~a~G~~p~~~-~--~~l~~~~~~gi~l~~~ 344 (388)
+|.||+|+|++|+.. . .+++++ ++++.+|+.
T Consensus 241 ~D~vi~a~G~~p~~~~l~~~~~~~~-~g~i~vd~~ 274 (335)
T 2zbw_A 241 VDAVLILAGYITKLGPLANWGLALE-KNKIKVDTT 274 (335)
T ss_dssp CSEEEECCCEEEECGGGGGSCCCEE-TTEEECCTT
T ss_pred cCEEEEeecCCCCchHhhhcceecc-CCeeeeCCC
Confidence 999999999999862 2 355565 567777764
No 27
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=99.93 E-value=2.3e-25 Score=220.82 Aligned_cols=243 Identities=14% Similarity=0.150 Sum_probs=162.8
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCcee-eCCCCCC----------------------------
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVR-YGVAPDH---------------------------- 62 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~-~g~~p~~---------------------------- 62 (388)
..+||+||||||||+++|..|++ .|.+|+|||+. .+||.|. .||.|..
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~--~g~~V~liE~~-~~GG~~~n~gciP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~ 86 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAAS--YGAKTLLVEAK-ALGGTCVNVGCVPKKVMWYASDLATRVSHANEYGLYQNLPLDK 86 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH--TSCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTBSTTSCCSG
T ss_pred ccCCEEEEcCCHHHHHHHHHHHH--CCCcEEEEeCC-CcCCcCcccCcHHHHHHHHHHHHHHHHHhHHhcCccccccccc
Confidence 35799999999999999999999 89999999998 6787763 2322210
Q ss_pred ----cchhH-----------HHHHHHHhhcCCCcEEEceEEEEE-----Eeeeccc---ccccCEEEEeeCCCCCCCC-C
Q psy4525 63 ----PEVKN-----------VINTFTKTGDNPRVNFYGNICLGQ-----DISLGDL---TNAYHAVVLTYGADNDKKL-N 118 (388)
Q Consensus 63 ----~~~~~-----------~~~~~~~~~~~~~i~~~~~~~v~~-----~~~~~~~---~~~yd~lvlAtG~~~~~~~-~ 118 (388)
..... +...+...+++.+++++.+..... .+...+. ...||+||+|||+.+ +.| +
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~~~v~~~~g~~~~~~~d~lviAtGs~p-~~p~~ 165 (479)
T 2hqm_A 87 EHLTFNWPEFKQKRDAYVHRLNGIYQKNLEKEKVDVVFGWARFNKDGNVEVQKRDNTTEVYSANHILVATGGKA-IFPEN 165 (479)
T ss_dssp GGCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECTTSCEEEEESSSCCEEEEEEEEEECCCEEE-CCCTT
T ss_pred ccCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeCCEEEEEeCCCcEEEEEeCEEEEcCCCCC-CCCCC
Confidence 01111 112233445567888887754321 1222233 347999999999987 466 7
Q ss_pred CCCCCCCCeeecccccccccCCCCccccCcCCCCCeEEEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcE
Q psy4525 119 IPGEDGKNIISARSFVGWYNGLPEDASLDLSLDCEEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKS 198 (388)
Q Consensus 119 i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (388)
+||.+ .++++.++... ...+++++|||+|++|+|+|..|. +.+ .+
T Consensus 166 i~g~~--~~~~~~~~~~l------------~~~~~~vvViGgG~ig~E~A~~l~--------------------~~g-~~ 210 (479)
T 2hqm_A 166 IPGFE--LGTDSDGFFRL------------EEQPKKVVVVGAGYIGIELAGVFH--------------------GLG-SE 210 (479)
T ss_dssp STTGG--GSBCHHHHHHC------------SSCCSEEEEECSSHHHHHHHHHHH--------------------HTT-CE
T ss_pred CCCcc--cccchHHHhcc------------cccCCeEEEECCCHHHHHHHHHHH--------------------HcC-Cc
Confidence 88763 34444444321 123689999999999999999876 233 57
Q ss_pred EEEEeecCcccccCCHHHHHHHhcCCCceEEecccccccchhhhccccchhhHHHHHHHhhCCCCCCCCCCceeEEEEec
Q psy4525 199 VNLVGRRGALQVAFTIKEFREMTKLPHVQTVFRNEQLCGVHEASATLARPRKRLTELILKTSNPDESKSNCSKYFRPIFL 278 (388)
Q Consensus 199 V~~i~r~~~~~~~~~~~el~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~ 278 (388)
|+++.|.+.+...+. +++. +.+.+.+. +.||+++++
T Consensus 211 Vtlv~~~~~~l~~~d-~~~~-------------------------------~~l~~~l~------------~~Gv~i~~~ 246 (479)
T 2hqm_A 211 THLVIRGETVLRKFD-ECIQ-------------------------------NTITDHYV------------KEGINVHKL 246 (479)
T ss_dssp EEEECSSSSSCTTSC-HHHH-------------------------------HHHHHHHH------------HHTCEEECS
T ss_pred eEEEEeCCccccccC-HHHH-------------------------------HHHHHHHH------------hCCeEEEeC
Confidence 999999977643322 2211 12222222 579999999
Q ss_pred CcceeeeeCCCCceeEEEEccCccccCCce-eEEecceEEEccccCCccCC----CCCcccCCCccccCCCC
Q psy4525 279 RSPTEFKLNDNGAITGINFANQQALVTEDT-ELIPSGIAFRSIGYQSRCVD----SDIPFNEKSCTVIPKEG 345 (388)
Q Consensus 279 ~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~-~~l~~D~Vi~a~G~~p~~~~----~~l~~~~~~gi~l~~~~ 345 (388)
+.++++..++++.+..+.+ .++ ++++||.||+|+|++||+.. .++++++++++.+|+..
T Consensus 247 ~~v~~i~~~~~~~~~~v~~--------~~G~~~i~~D~vv~a~G~~p~~~l~l~~~gl~~~~~G~i~vd~~~ 310 (479)
T 2hqm_A 247 SKIVKVEKNVETDKLKIHM--------NDSKSIDDVDELIWTIGRKSHLGMGSENVGIKLNSHDQIIADEYQ 310 (479)
T ss_dssp CCEEEEEECC-CCCEEEEE--------TTSCEEEEESEEEECSCEEECCCSSGGGGTCCBCTTSCBCCCTTC
T ss_pred CEEEEEEEcCCCcEEEEEE--------CCCcEEEEcCEEEECCCCCCccccChhhcCceECCCCCEeECCCC
Confidence 9999998654443445544 234 68999999999999999721 35677766678887654
No 28
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=99.93 E-value=1.7e-25 Score=220.08 Aligned_cols=241 Identities=15% Similarity=0.177 Sum_probs=161.4
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCce-eeCCCCCCc---------------------------c
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLV-RYGVAPDHP---------------------------E 64 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~-~~g~~p~~~---------------------------~ 64 (388)
.+||+||||||||+++|..|++ .|.+|+|||++ .+||.| +.||.|... .
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~--~g~~V~liE~~-~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~~g~~~~~~~~~ 80 (450)
T 1ges_A 4 HYDYIAIGGGSGGIASINRAAM--YGQKCALIEAK-ELGGTCVNVGCVPKKVMWHAAQIREAIHMYGPDYGFDTTINKFN 80 (450)
T ss_dssp EEEEEEECCSHHHHHHHHHHHT--TTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHTTGGGGTEEEEEEEEC
T ss_pred cCCEEEECCCHHHHHHHHHHHh--CCCeEEEEcCC-CCCCcccccCccChHHHHHHHHHHHHHHHHHHhcCccCCCCccC
Confidence 4799999999999999999999 89999999998 678876 334333210 0
Q ss_pred hh-----------HHHHHHHHhhcCCCcEEEceEEEEE---EeeecccccccCEEEEeeCCCCCCCCCCCCCCCCCeeec
Q psy4525 65 VK-----------NVINTFTKTGDNPRVNFYGNICLGQ---DISLGDLTNAYHAVVLTYGADNDKKLNIPGEDGKNIISA 130 (388)
Q Consensus 65 ~~-----------~~~~~~~~~~~~~~i~~~~~~~v~~---~~~~~~~~~~yd~lvlAtG~~~~~~~~i~g~~~~~v~~~ 130 (388)
.. .+...+...+.+.+++++.+..... .+.++.....||+||+|||+.+ +.|++||.+ .+++.
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~i~~~~v~~~g~~~~~d~lviAtGs~p-~~p~i~g~~--~~~~~ 157 (450)
T 1ges_A 81 WETLIASRTAYIDRIHTSYENVLGKNNVDVIKGFARFVDAKTLEVNGETITADHILIATGGRP-SHPDIPGVE--YGIDS 157 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCCEEEETTEEEETTEEEEEEEEEECCCEEE-CCCCSTTGG--GSBCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCEEEECCEEEEeCEEEECCCCCC-CCCCCCCcc--ceecH
Confidence 11 1112223344567888886654321 2333333358999999999987 477788763 34444
Q ss_pred ccccccccCCCCccccCcCCCCCeEEEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecCcccc
Q psy4525 131 RSFVGWYNGLPEDASLDLSLDCEEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRGALQV 210 (388)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~vvVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~~~~~ 210 (388)
.++... ...+++++|||+|++|+|+|..|+ +.+ .+|+++.|.+.+..
T Consensus 158 ~~~~~~------------~~~~~~vvViGgG~~g~e~A~~l~--------------------~~g-~~Vtlv~~~~~~l~ 204 (450)
T 1ges_A 158 DGFFAL------------PALPERVAVVGAGYIGVELGGVIN--------------------GLG-AKTHLFEMFDAPLP 204 (450)
T ss_dssp HHHHHC------------SSCCSEEEEECCSHHHHHHHHHHH--------------------HTT-CEEEEECSSSSSST
T ss_pred HHhhhh------------hhcCCeEEEECCCHHHHHHHHHHH--------------------hcC-CEEEEEEeCCchhh
Confidence 444321 123689999999999999999876 233 57999999876543
Q ss_pred cCCHHHHHHHhcCCCceEEecccccccchhhhccccchhhHHHHHHHhhCCCCCCCCCCceeEEEEecCcceeeeeCCCC
Q psy4525 211 AFTIKEFREMTKLPHVQTVFRNEQLCGVHEASATLARPRKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTEFKLNDNG 290 (388)
Q Consensus 211 ~~~~~el~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~ 290 (388)
.+.+ ++ .+.+.+.+. +.||++++++.++++..++++
T Consensus 205 ~~~~-~~-------------------------------~~~l~~~l~------------~~Gv~i~~~~~v~~i~~~~~~ 240 (450)
T 1ges_A 205 SFDP-MI-------------------------------SETLVEVMN------------AEGPQLHTNAIPKAVVKNTDG 240 (450)
T ss_dssp TSCH-HH-------------------------------HHHHHHHHH------------HHSCEEECSCCEEEEEECTTS
T ss_pred hhhH-HH-------------------------------HHHHHHHHH------------HCCCEEEeCCEEEEEEEeCCc
Confidence 3221 11 112222222 579999999999999865433
Q ss_pred ceeEEEEccCccccCCceeEEecceEEEccccCCccCC-----CCCcccCCCccccCCCC
Q psy4525 291 AITGINFANQQALVTEDTELIPSGIAFRSIGYQSRCVD-----SDIPFNEKSCTVIPKEG 345 (388)
Q Consensus 291 ~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~p~~~~-----~~l~~~~~~gi~l~~~~ 345 (388)
. ..+.+ .++++++||.||+|+|++||+.. .++++++++.+.+|+..
T Consensus 241 ~-~~v~~--------~~g~~i~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~~ 291 (450)
T 1ges_A 241 S-LTLEL--------EDGRSETVDCLIWAIGREPANDNINLEAAGVKTNEKGYIVVDKYQ 291 (450)
T ss_dssp C-EEEEE--------TTSCEEEESEEEECSCEEESCTTSCHHHHTCCBCTTSCBCCCTTS
T ss_pred E-EEEEE--------CCCcEEEcCEEEECCCCCcCCCCCCchhcCceECCCCCEeECCCC
Confidence 2 23443 34458999999999999999831 35667665558887654
No 29
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=99.93 E-value=1.3e-25 Score=217.81 Aligned_cols=248 Identities=14% Similarity=0.176 Sum_probs=163.9
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCC--cEEEEcCCCCCCCc---eeeCCCCCCcchhHHHHHHHHhhcCCCcEEEceE
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQS--TVDIYEKLPVPFGL---VRYGVAPDHPEVKNVINTFTKTGDNPRVNFYGNI 87 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~--~v~lie~~~~~gg~---~~~g~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~ 87 (388)
+++|+|||||+||+++|..|++ .|. +|+|||+++.+... +............++.....+++.+.+++++. .
T Consensus 1 ~k~vvIIGaG~aGl~aA~~L~~--~g~~~~V~lie~~~~~~y~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~-~ 77 (404)
T 3fg2_P 1 NDTVLIAGAGHAGFQVAVSLRQ--AKYPGRIALINDEKHLPYQRPPLSKAYLKSGGDPNSLMFRPEKFFQDQAIELIS-D 77 (404)
T ss_dssp CCCEEEECCSHHHHHHHHHHHH--TTCCSCEEEECCSSSSSBCSGGGGTGGGGSCCCTTSSBSSCHHHHHHTTEEEEC-C
T ss_pred CCCEEEEcChHHHHHHHHHHHh--hCcCCCEEEEeCCCCCCCCCccCCHHHHCCCCCHHHccCCCHHHHHhCCCEEEE-E
Confidence 3689999999999999999999 676 89999998754321 11011011111111222223344456888887 4
Q ss_pred EE-EE-----Eeeeccc-ccccCEEEEeeCCCCCCCCCCCCCCCCCeeecccccccccCCCCccccCcCCCCCeEEEEcC
Q psy4525 88 CL-GQ-----DISLGDL-TNAYHAVVLTYGADNDKKLNIPGEDGKNIISARSFVGWYNGLPEDASLDLSLDCEEATILGQ 160 (388)
Q Consensus 88 ~v-~~-----~~~~~~~-~~~yd~lvlAtG~~~~~~~~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVIGg 160 (388)
.+ .. .+.+.+. ...||+||+|||+.+ +.+++||.+.+++++.+.+...... . .....+++++|||+
T Consensus 78 ~v~~id~~~~~v~~~~g~~~~~d~lvlAtG~~p-~~~~i~g~~~~~v~~~~~~~d~~~l----~--~~~~~~~~vvViGg 150 (404)
T 3fg2_P 78 RMVSIDREGRKLLLASGTAIEYGHLVLATGARN-RMLDVPNASLPDVLYLRTLDESEVL----R--QRMPDKKHVVVIGA 150 (404)
T ss_dssp CEEEEETTTTEEEESSSCEEECSEEEECCCEEE-CCCCSTTTTSTTEECCSSHHHHHHH----H--HHGGGCSEEEEECC
T ss_pred EEEEEECCCCEEEECCCCEEECCEEEEeeCCCc-cCCCCCCCCCCcEEEECCHHHHHHH----H--HHhhcCCeEEEECC
Confidence 33 22 2444444 348999999999977 5788999888888865544321100 0 11224789999999
Q ss_pred ChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecCcccccCCHHHHHHHhcCCCceEEecccccccchh
Q psy4525 161 GNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRGALQVAFTIKEFREMTKLPHVQTVFRNEQLCGVHE 240 (388)
Q Consensus 161 G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~~~~~~~~~~el~~l~~~~~~~~~~~~~~~~~~~~ 240 (388)
|++|+|+|..|. +.+ .+|+++.+.+.+.....++++.
T Consensus 151 G~~g~e~A~~l~--------------------~~g-~~Vtvv~~~~~~~~~~~~~~~~---------------------- 187 (404)
T 3fg2_P 151 GFIGLEFAATAR--------------------AKG-LEVDVVELAPRVMARVVTPEIS---------------------- 187 (404)
T ss_dssp SHHHHHHHHHHH--------------------HTT-CEEEEECSSSSTTTTTSCHHHH----------------------
T ss_pred CHHHHHHHHHHH--------------------hCC-CEEEEEeCCCcchhhccCHHHH----------------------
Confidence 999999999775 233 5799999988765432222222
Q ss_pred hhccccchhhHHHHHHHhhCCCCCCCCCCceeEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEecceEEEcc
Q psy4525 241 ASATLARPRKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPSGIAFRSI 320 (388)
Q Consensus 241 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~ 320 (388)
+.+.+.+. +.||++++++.++++..+ ++.+..+++ .++++++||.||+|+
T Consensus 188 ---------~~l~~~l~------------~~GV~i~~~~~v~~i~~~-~~~v~~V~~--------~dG~~i~aD~Vv~a~ 237 (404)
T 3fg2_P 188 ---------SYFHDRHS------------GAGIRMHYGVRATEIAAE-GDRVTGVVL--------SDGNTLPCDLVVVGV 237 (404)
T ss_dssp ---------HHHHHHHH------------HTTCEEECSCCEEEEEEE-TTEEEEEEE--------TTSCEEECSEEEECC
T ss_pred ---------HHHHHHHH------------hCCcEEEECCEEEEEEec-CCcEEEEEe--------CCCCEEEcCEEEECc
Confidence 12222222 579999999999999864 367777765 345689999999999
Q ss_pred ccCCccC---CCCCcccCCCccccCCCC
Q psy4525 321 GYQSRCV---DSDIPFNEKSCTVIPKEG 345 (388)
Q Consensus 321 G~~p~~~---~~~l~~~~~~gi~l~~~~ 345 (388)
|++|+.. ..++..+ +|+.+|+..
T Consensus 238 G~~p~~~l~~~~gl~~~--~Gi~vd~~~ 263 (404)
T 3fg2_P 238 GVIPNVEIAAAAGLPTA--AGIIVDQQL 263 (404)
T ss_dssp CEEECCHHHHHTTCCBS--SSEEECTTS
T ss_pred CCccCHHHHHhCCCCCC--CCEEECCCc
Confidence 9999973 2456665 568877643
No 30
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.92 E-value=2e-24 Score=201.70 Aligned_cols=242 Identities=18% Similarity=0.178 Sum_probs=163.5
Q ss_pred CcEEEECccHHHHHHHHHHHhhCCCC-cEEEEcCCCCCCCceeeC----CCCC---CcchhHHHHHHHHhhcCCCcEEEc
Q psy4525 14 PNVCIVGSGPAGFYCAQQILKLLPQS-TVDIYEKLPVPFGLVRYG----VAPD---HPEVKNVINTFTKTGDNPRVNFYG 85 (388)
Q Consensus 14 ~~vvIIGaG~aGl~aA~~l~~~~~g~-~v~lie~~~~~gg~~~~g----~~p~---~~~~~~~~~~~~~~~~~~~i~~~~ 85 (388)
++|+||||||||+++|..|++ .|. +|+|||+. .+||.+.+. ..|. .....++..++.+.+.+.+++++.
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~--~g~~~v~lie~~-~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~ 78 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATR--GGVKNAVLFEKG-MPGGQITGSSEIENYPGVKEVVSGLDFMQPWQEQCFRFGLKHEM 78 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--TTCSSEEEECSS-STTCGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHHTTSCEEEC
T ss_pred ceEEEECccHHHHHHHHHHHH--CCCCcEEEEcCC-CCCcccccccccccCCCCcccCCHHHHHHHHHHHHHHcCCEEEE
Confidence 689999999999999999999 899 99999995 677776321 0122 234567788888888888998887
Q ss_pred eEEEEE-------Eeeeccc-ccccCEEEEeeCCCCCCCCCCCCCCC---CCeeecccccccccCCCCccccCcCCCCCe
Q psy4525 86 NICLGQ-------DISLGDL-TNAYHAVVLTYGADNDKKLNIPGEDG---KNIISARSFVGWYNGLPEDASLDLSLDCEE 154 (388)
Q Consensus 86 ~~~v~~-------~~~~~~~-~~~yd~lvlAtG~~~~~~~~i~g~~~---~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (388)
...... .+...+. ...||+||+|||+.+ +.+++||.+. +++++..... .....+++
T Consensus 79 ~~v~~i~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~-~~~~~~g~~~~~~~~~~~~~~~~------------~~~~~~~~ 145 (311)
T 2q0l_A 79 TAVQRVSKKDSHFVILAEDGKTFEAKSVIIATGGSP-KRTGIKGESEYWGKGVSTCATCD------------GFFYKNKE 145 (311)
T ss_dssp SCEEEEEEETTEEEEEETTSCEEEEEEEEECCCEEE-CCCCCBTHHHHBTTTEESCHHHH------------GGGGTTSE
T ss_pred EEEEEEEEcCCEEEEEEcCCCEEECCEEEECCCCCC-CCCCCCChhhccCCcEEEeecCC------------hhhcCCCE
Confidence 433322 1223222 247999999999877 4777887531 2333221111 11234799
Q ss_pred EEEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecCcccccCCHHHHHHHhcCCCceEEecccc
Q psy4525 155 ATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRGALQVAFTIKEFREMTKLPHVQTVFRNEQ 234 (388)
Q Consensus 155 vvVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~~~~~~~~~~el~~l~~~~~~~~~~~~~~ 234 (388)
|+|||+|.+|+|+|..|. ....+|+++.|++.+.. .+ +
T Consensus 146 v~VvG~G~~g~e~A~~l~---------------------~~g~~Vtlv~~~~~~~~--~~-~------------------ 183 (311)
T 2q0l_A 146 VAVLGGGDTAVEEAIYLA---------------------NICKKVYLIHRRDGFRC--AP-I------------------ 183 (311)
T ss_dssp EEEECCSHHHHHHHHHHH---------------------TTSSEEEEECSSSSCCS--CH-H------------------
T ss_pred EEEECCCHHHHHHHHHHH---------------------hcCCEEEEEeeCCccCC--CH-H------------------
Confidence 999999999999999886 22357999999876421 11 1
Q ss_pred cccchhhhccccchhhHHHHHHHhhCCCCCCCCCCceeEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEecc
Q psy4525 235 LCGVHEASATLARPRKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPSG 314 (388)
Q Consensus 235 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D 314 (388)
+.+.+. ...||+++++..++++..+ ++.+..+.+.+. ..++..+++||
T Consensus 184 -----------------~~~~l~-----------~~~gv~v~~~~~v~~i~~~-~~~v~~v~~~~~---~~g~~~~i~~D 231 (311)
T 2q0l_A 184 -----------------TLEHAK-----------NNDKIEFLTPYVVEEIKGD-ASGVSSLSIKNT---ATNEKRELVVP 231 (311)
T ss_dssp -----------------HHHHHH-----------TCTTEEEETTEEEEEEEEE-TTEEEEEEEEET---TTCCEEEEECS
T ss_pred -----------------HHHHHh-----------hCCCeEEEeCCEEEEEECC-CCcEeEEEEEec---CCCceEEEecC
Confidence 111111 1368999999999999864 245656665421 12334589999
Q ss_pred eEEEccccCCccCC---C----CCcccCCCccccCCCC
Q psy4525 315 IAFRSIGYQSRCVD---S----DIPFNEKSCTVIPKEG 345 (388)
Q Consensus 315 ~Vi~a~G~~p~~~~---~----~l~~~~~~gi~l~~~~ 345 (388)
.||+|+|++|++.. . ++.+++++++.+|+..
T Consensus 232 ~vi~a~G~~p~~~~l~~~g~~~~l~~~~~g~i~vd~~~ 269 (311)
T 2q0l_A 232 GFFIFVGYDVNNAVLKQEDNSMLCKCDEYGSIVVDFSM 269 (311)
T ss_dssp EEEECSCEEECCGGGBCTTSCBSSCBCTTSCBCCCTTC
T ss_pred EEEEEecCccChhhhhcccccceeEeccCCCEEeCCcc
Confidence 99999999998631 2 2566666677777653
No 31
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=99.92 E-value=4.2e-25 Score=219.67 Aligned_cols=246 Identities=15% Similarity=0.212 Sum_probs=162.9
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEc--------CCCCCCCce-eeCCCCCC---------------------
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYE--------KLPVPFGLV-RYGVAPDH--------------------- 62 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie--------~~~~~gg~~-~~g~~p~~--------------------- 62 (388)
.+||+||||||||+++|..|++. .|.+|+||| +...+||.| +.||.|..
T Consensus 7 ~~dvvVIGgG~aGl~aA~~la~~-~G~~V~liE~~~~~~~~~~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~ 85 (495)
T 2wpf_A 7 AFDLVVIGAGSGGLEAGWNAATL-YGKRVAVVDVQTSHGPPFYAALGGTCVNVGCVPKKLMVTGAQYMDHLRESAGFGWE 85 (495)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH-HCCCEEEEESCSSSBTTTBCBTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTTEE
T ss_pred ccCEEEECCChhHHHHHHHHHHh-cCCeEEEEecccccccccCCCCCCeeecCCcchHHHHHHHHHHHHHHhHHHhcCcc
Confidence 47999999999999999999983 389999999 355788877 33443311
Q ss_pred -------cchhHHHH-----------HHHHhhcCC-CcEEEceEEEEE---Eeeec---------ccccccCEEEEeeCC
Q psy4525 63 -------PEVKNVIN-----------TFTKTGDNP-RVNFYGNICLGQ---DISLG---------DLTNAYHAVVLTYGA 111 (388)
Q Consensus 63 -------~~~~~~~~-----------~~~~~~~~~-~i~~~~~~~v~~---~~~~~---------~~~~~yd~lvlAtG~ 111 (388)
....++.. .+...+++. +++++.+..... .+++. .....||+||||||+
T Consensus 86 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~~~~i~~~~v~v~~~~~~~~~~~~~~~~d~lViATGs 165 (495)
T 2wpf_A 86 FDGSSVKANWKKLIAAKNEAVLDINKSYEGMFNDTEGLDFFLGWGSLESKNVVVVRETADPKSAVKERLQADHILLATGS 165 (495)
T ss_dssp CCGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEEEESEEEEEETTEEEEESSSSTTSCEEEEEEEEEEEECCCE
T ss_pred cCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeEEEEeeCCEEEEeecCCccCCCCeEEEcCEEEEeCCC
Confidence 11112221 223344566 899887754321 23333 223489999999999
Q ss_pred CCCCCCCCCCCCCCCeeecccccccccCCCCccccCcCCCCCeEEEEcCChHHHHHHHHhccCCcccccccCchhHHHhh
Q psy4525 112 DNDKKLNIPGEDGKNIISARSFVGWYNGLPEDASLDLSLDCEEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKL 191 (388)
Q Consensus 112 ~~~~~~~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~ 191 (388)
.+ +.|++||.+ .+++..++... ...+++++|||+|.+|+|+|..|. .+
T Consensus 166 ~p-~~p~i~G~~--~~~~~~~~~~~------------~~~~~~vvViGgG~ig~E~A~~l~-----------------~~ 213 (495)
T 2wpf_A 166 WP-QMPAIPGIE--HCISSNEAFYL------------PEPPRRVLTVGGGFISVEFAGIFN-----------------AY 213 (495)
T ss_dssp EE-CCCCCTTGG--GCEEHHHHTTC------------SSCCSEEEEECSSHHHHHHHHHHH-----------------HH
T ss_pred Cc-CCCCCCCcc--ccccHHHHHhh------------hhcCCeEEEECCCHHHHHHHHHHH-----------------hh
Confidence 87 477788763 45655554421 123689999999999999999876 10
Q ss_pred hcCCCcEEEEEeecCcccccCCHHHHHHHhcCCCceEEecccccccchhhhccccchhhHHHHHHHhhCCCCCCCCCCce
Q psy4525 192 STSRIKSVNLVGRRGALQVAFTIKEFREMTKLPHVQTVFRNEQLCGVHEASATLARPRKRLTELILKTSNPDESKSNCSK 271 (388)
Q Consensus 192 ~~~~~~~V~~i~r~~~~~~~~~~~el~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (388)
. ....+|++++|.+.+...+.+ ++. +.+.+.+. +.
T Consensus 214 ~-~~g~~Vtlv~~~~~~l~~~d~-~~~-------------------------------~~l~~~l~------------~~ 248 (495)
T 2wpf_A 214 K-PPGGKVTLCYRNNLILRGFDE-TIR-------------------------------EEVTKQLT------------AN 248 (495)
T ss_dssp C-CTTCEEEEEESSSSSCTTSCH-HHH-------------------------------HHHHHHHH------------HT
T ss_pred C-CCCCeEEEEEcCCccccccCH-HHH-------------------------------HHHHHHHH------------hC
Confidence 0 113579999998876433221 111 12222322 57
Q ss_pred eEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEecceEEEccccCCccC---C--CCCcccCCCccccCCCC
Q psy4525 272 YFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPSGIAFRSIGYQSRCV---D--SDIPFNEKSCTVIPKEG 345 (388)
Q Consensus 272 gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~p~~~---~--~~l~~~~~~gi~l~~~~ 345 (388)
||++++++.++++..++++ ...+.+ .++++++||.||+|+|++||+. . .++.+++++++.+|+..
T Consensus 249 GV~i~~~~~v~~i~~~~~~-~~~v~~--------~~G~~i~~D~vv~a~G~~p~~~~L~l~~~gl~~~~~G~i~Vd~~~ 318 (495)
T 2wpf_A 249 GIEIMTNENPAKVSLNTDG-SKHVTF--------ESGKTLDVDVVMMAIGRIPRTNDLQLGNVGVKLTPKGGVQVDEFS 318 (495)
T ss_dssp TCEEEESCCEEEEEECTTS-CEEEEE--------TTSCEEEESEEEECSCEEECCGGGTGGGTTCCBCTTSSBCCCTTC
T ss_pred CCEEEeCCEEEEEEEcCCc-eEEEEE--------CCCcEEEcCEEEECCCCcccccccchhhcCccCCCCCCEEECCCC
Confidence 9999999999999865333 234443 3445899999999999999973 1 45667766668887654
No 32
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.92 E-value=5.7e-25 Score=219.06 Aligned_cols=253 Identities=13% Similarity=0.182 Sum_probs=165.3
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCcee-eCCCCCC-------------------------cch-
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVR-YGVAPDH-------------------------PEV- 65 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~-~g~~p~~-------------------------~~~- 65 (388)
.+||+||||||||+++|..|++ .|.+|+|||++ .+||.|. .||.|.. ...
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~--~g~~V~liE~~-~~GG~c~~~gc~P~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~ 78 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAAR--HNAKVALVEKS-RLGGTCVNVGCVPKKIMFNAASVHDILENSRHYGFDTKFSFNLP 78 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHH--TTCCEEEEESS-STTHHHHHTSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCCCCHH
T ss_pred ccCEEEECCCHHHHHHHHHHHH--CCCcEEEEeCC-CcCccccccCCcchHHHHHHHHHHHHHHhhHhcCCccCCccCHH
Confidence 3799999999999999999999 89999999998 4788763 2332211 011
Q ss_pred ----------hHHHHHHHHhhcCCCcEEEceEEEE---EEeeecc--------------cccccCEEEEeeCCCCCCCCC
Q psy4525 66 ----------KNVINTFTKTGDNPRVNFYGNICLG---QDISLGD--------------LTNAYHAVVLTYGADNDKKLN 118 (388)
Q Consensus 66 ----------~~~~~~~~~~~~~~~i~~~~~~~v~---~~~~~~~--------------~~~~yd~lvlAtG~~~~~~~~ 118 (388)
..+...+...+++.+++++.++.+. ..+.+.. ....||+||+|||+.+ ..|+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~id~~~v~v~~~~~~~~~~~~~~~~~~~~~d~lViAtGs~p-~~p~ 157 (500)
T 1onf_A 79 LLVERRDKYIQRLNNIYRQNLSKDKVDLYEGTASFLSENRILIKGTKDNNNKDNGPLNEEILEGRNILIAVGNKP-VFPP 157 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCCCCC--------------------------CBSSEEECCCCCB-CCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeCCEEEEEeccccccccccCCCceEEEeCEEEECCCCCC-CCCC
Confidence 1222233445566789888665321 1222221 2348999999999987 4777
Q ss_pred CCCCCCCCeeecccccccccCCCCccccCcCCCCCeEEEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcE
Q psy4525 119 IPGEDGKNIISARSFVGWYNGLPEDASLDLSLDCEEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKS 198 (388)
Q Consensus 119 i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (388)
+||.+ .+++..++.. ... +++++|||+|++|+|+|..|+ +.+ .+
T Consensus 158 i~G~~--~~~~~~~~~~------------~~~-~~~vvViGgG~ig~E~A~~l~--------------------~~g-~~ 201 (500)
T 1onf_A 158 VKGIE--NTISSDEFFN------------IKE-SKKIGIVGSGYIAVELINVIK--------------------RLG-ID 201 (500)
T ss_dssp CTTGG--GCEEHHHHTT------------CCC-CSEEEEECCSHHHHHHHHHHH--------------------TTT-CE
T ss_pred CCCCC--cccCHHHHhc------------cCC-CCeEEEECChHHHHHHHHHHH--------------------HcC-Ce
Confidence 88863 4555555431 111 789999999999999999886 233 57
Q ss_pred EEEEeecCcccccCCHHHHHHHhcCCCceEEecccccccchhhhccccchhhHHHHHHHhhCCCCCCCCCCceeEEEEec
Q psy4525 199 VNLVGRRGALQVAFTIKEFREMTKLPHVQTVFRNEQLCGVHEASATLARPRKRLTELILKTSNPDESKSNCSKYFRPIFL 278 (388)
Q Consensus 199 V~~i~r~~~~~~~~~~~el~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~ 278 (388)
|+++.|.+.+...+. +++. +.+.+.+. +.||+++++
T Consensus 202 Vtlv~~~~~~l~~~d-~~~~-------------------------------~~l~~~l~------------~~gv~i~~~ 237 (500)
T 1onf_A 202 SYIFARGNRILRKFD-ESVI-------------------------------NVLENDMK------------KNNINIVTF 237 (500)
T ss_dssp EEEECSSSSSCTTSC-HHHH-------------------------------HHHHHHHH------------HTTCEEECS
T ss_pred EEEEecCCccCcccc-hhhH-------------------------------HHHHHHHH------------hCCCEEEEC
Confidence 999999887653322 2221 12222222 579999999
Q ss_pred CcceeeeeCCCCceeEEEEccCccccCCceeE-EecceEEEccccCCccC---C--CCCcccCCCccccCCCCCCeecch
Q psy4525 279 RSPTEFKLNDNGAITGINFANQQALVTEDTEL-IPSGIAFRSIGYQSRCV---D--SDIPFNEKSCTVIPKEGVPVVTWE 352 (388)
Q Consensus 279 ~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~-l~~D~Vi~a~G~~p~~~---~--~~l~~~~~~gi~l~~~~~~~~~~~ 352 (388)
+.++++..++++. ..+.+ .++++ ++||.||+|+|++||+. . .++.+ +++.+.+|+... .-..+
T Consensus 238 ~~v~~i~~~~~~~-~~v~~--------~~g~~~~~~D~vi~a~G~~p~~~~l~~~~~g~~~-~~G~i~vd~~~~-t~~~~ 306 (500)
T 1onf_A 238 ADVVEIKKVSDKN-LSIHL--------SDGRIYEHFDHVIYCVGRSPDTENLKLEKLNVET-NNNYIVVDENQR-TSVNN 306 (500)
T ss_dssp CCEEEEEESSTTC-EEEEE--------TTSCEEEEESEEEECCCBCCTTTTSSCTTTTCCB-SSSCEEECTTCB-CSSSS
T ss_pred CEEEEEEEcCCce-EEEEE--------CCCcEEEECCEEEECCCCCcCCCCCCchhcCccc-cCCEEEECCCcc-cCCCC
Confidence 9999998643332 34443 23345 99999999999999972 1 34555 444577887653 22346
Q ss_pred hhHHhHHH
Q psy4525 353 GWKAIDKE 360 (388)
Q Consensus 353 ~w~~~~~~ 360 (388)
.|...|+.
T Consensus 307 iya~GD~~ 314 (500)
T 1onf_A 307 IYAVGDCC 314 (500)
T ss_dssp EEECSTTE
T ss_pred EEEEeccc
Confidence 77777766
No 33
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=99.92 E-value=3.1e-25 Score=218.91 Aligned_cols=240 Identities=14% Similarity=0.165 Sum_probs=160.7
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCcee-eCCCCCC--------------------------cch
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVR-YGVAPDH--------------------------PEV 65 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~-~g~~p~~--------------------------~~~ 65 (388)
.+||+||||||||+++|..|++ .|.+|+|||+. .+||.|. .||.|.. ...
T Consensus 4 ~~dVvIIGgG~aGl~aA~~l~~--~g~~V~liE~~-~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~ 80 (463)
T 2r9z_A 4 HFDLIAIGGGSGGLAVAEKAAA--FGKRVALIESK-ALGGTCVNVGCVPKKVMWYASHLAEAVRDAPGFGVQASGGTLDW 80 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH--TTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTBCCC---CCH
T ss_pred cCcEEEECCCHHHHHHHHHHHh--CCCcEEEEcCC-CCCCcCcCcCchhHHHHHHHHHHHHHHhhhhhcCcccCCCCcCH
Confidence 4799999999999999999999 89999999998 6788763 2332210 011
Q ss_pred h-----------HHHHHHHHhhcCCCcEEEceEEEEE---EeeecccccccCEEEEeeCCCCCCCCCCCCCCCCCeeecc
Q psy4525 66 K-----------NVINTFTKTGDNPRVNFYGNICLGQ---DISLGDLTNAYHAVVLTYGADNDKKLNIPGEDGKNIISAR 131 (388)
Q Consensus 66 ~-----------~~~~~~~~~~~~~~i~~~~~~~v~~---~~~~~~~~~~yd~lvlAtG~~~~~~~~i~g~~~~~v~~~~ 131 (388)
. .+...+...+.+.+++++.+..... .+.++.....||+||+|||+.+ +.|++||.+ .+++..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~v~~~g~~~~~d~lviAtGs~p-~~p~i~G~~--~~~~~~ 157 (463)
T 2r9z_A 81 PRLVAGRDRYIGAINSFWDGYVERLGITRVDGHARFVDAHTIEVEGQRLSADHIVIATGGRP-IVPRLPGAE--LGITSD 157 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEETTEEEETTEEEEEEEEEECCCEEE-CCCSCTTGG--GSBCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEeEEEEccCCEEEECCEEEEcCEEEECCCCCC-CCCCCCCcc--ceecHH
Confidence 1 1222233445667898887654321 2444333358999999999987 467788763 344444
Q ss_pred cccccccCCCCccccCcCCCCCeEEEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecCccccc
Q psy4525 132 SFVGWYNGLPEDASLDLSLDCEEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRGALQVA 211 (388)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~vvVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~~~~~~ 211 (388)
++... ...+++++|||+|.+|+|+|..|. +.+ .+|+++.|++.+...
T Consensus 158 ~~~~~------------~~~~~~vvVvGgG~~g~e~A~~l~--------------------~~G-~~Vtlv~~~~~~l~~ 204 (463)
T 2r9z_A 158 GFFAL------------QQQPKRVAIIGAGYIGIELAGLLR--------------------SFG-SEVTVVALEDRLLFQ 204 (463)
T ss_dssp HHHHC------------SSCCSEEEEECCSHHHHHHHHHHH--------------------HTT-CEEEEECSSSSSSTT
T ss_pred HHhhh------------hccCCEEEEECCCHHHHHHHHHHH--------------------hcC-CEEEEEEcCCccccc
Confidence 44321 123689999999999999999876 233 579999998765433
Q ss_pred CCHHHHHHHhcCCCceEEecccccccchhhhccccchhhHHHHHHHhhCCCCCCCCCCceeEEEEecCcceeeeeCCCCc
Q psy4525 212 FTIKEFREMTKLPHVQTVFRNEQLCGVHEASATLARPRKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTEFKLNDNGA 291 (388)
Q Consensus 212 ~~~~el~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~ 291 (388)
+.+ ++. +.+.+.+. +.||++++++.++++..++++
T Consensus 205 ~~~-~~~-------------------------------~~l~~~l~------------~~gv~i~~~~~v~~i~~~~~~- 239 (463)
T 2r9z_A 205 FDP-LLS-------------------------------ATLAENMH------------AQGIETHLEFAVAALERDAQG- 239 (463)
T ss_dssp SCH-HHH-------------------------------HHHHHHHH------------HTTCEEESSCCEEEEEEETTE-
T ss_pred cCH-HHH-------------------------------HHHHHHHH------------HCCCEEEeCCEEEEEEEeCCe-
Confidence 221 111 12222222 578999999999999864322
Q ss_pred eeEEEEccCccccCCcee-EEecceEEEccccCCccCC-----CCCcccCCCccccCCCC
Q psy4525 292 ITGINFANQQALVTEDTE-LIPSGIAFRSIGYQSRCVD-----SDIPFNEKSCTVIPKEG 345 (388)
Q Consensus 292 v~~v~~~~~~~~~~~~~~-~l~~D~Vi~a~G~~p~~~~-----~~l~~~~~~gi~l~~~~ 345 (388)
..+.+ .+++ ++++|.||+|+|++||... .++++++++.+.+|+..
T Consensus 240 -~~v~~--------~~G~~~i~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~~~ 290 (463)
T 2r9z_A 240 -TTLVA--------QDGTRLEGFDSVIWAVGRAPNTRDLGLEAAGIEVQSNGMVPTDAYQ 290 (463)
T ss_dssp -EEEEE--------TTCCEEEEESEEEECSCEEESCTTSCHHHHTCCCCTTSCCCCCTTS
T ss_pred -EEEEE--------eCCcEEEEcCEEEECCCCCcCCCCCCchhcCCccCCCCCEeECCCC
Confidence 33433 3445 7999999999999999831 35666665568887653
No 34
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=99.92 E-value=5.4e-25 Score=217.46 Aligned_cols=247 Identities=14% Similarity=0.215 Sum_probs=166.2
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCcee-eCCCCCCc---------------------chhH---
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVR-YGVAPDHP---------------------EVKN--- 67 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~-~g~~p~~~---------------------~~~~--- 67 (388)
.+||+||||||||+++|..|++ .|.+|+|||+.+.+||.|. .|+.|... ....
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~--~G~~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~~~~~~~~~~~~~ 81 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAK--AKYNVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIANVKIPLDFSTVQD 81 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH--TTCCEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHCSCCCCCHHHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHh--CCCeEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhcccCCCCcCHHHHHH
Confidence 3799999999999999999999 8999999999889999873 35543210 1111
Q ss_pred -------HH--HHHHHhhcCCCcEEEceEEEEE-----Eeeeccc-c--cccCEEEEeeCCCCCCCCCCCCCCCCCeeec
Q psy4525 68 -------VI--NTFTKTGDNPRVNFYGNICLGQ-----DISLGDL-T--NAYHAVVLTYGADNDKKLNIPGEDGKNIISA 130 (388)
Q Consensus 68 -------~~--~~~~~~~~~~~i~~~~~~~v~~-----~~~~~~~-~--~~yd~lvlAtG~~~~~~~~i~g~~~~~v~~~ 130 (388)
+. ..+...+++.+++++.+..... .+...+. . ..||+||+|||+.+ +.|++||.+ ++++.
T Consensus 82 ~~~~~~~l~~~~~~~~~~~~~~v~~~~g~v~~id~~~~~V~~~~g~~~~~~~d~lviAtG~~p-~~p~i~G~~--~~~t~ 158 (466)
T 3l8k_A 82 RKDYVQELRFKQHKRNMSQYETLTFYKGYVKIKDPTHVIVKTDEGKEIEAETRYMIIASGAET-AKLRLPGVE--YCLTS 158 (466)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTTEEEESEEEEEEETTEEEEEETTSCEEEEEEEEEEECCCEEE-CCCCCTTGG--GSBCH
T ss_pred HHHhheeccccchHHHHHHhCCCEEEEeEEEEecCCeEEEEcCCCcEEEEecCEEEECCCCCc-cCCCCCCcc--ceEeH
Confidence 11 4455567778999987754322 1333322 3 57999999999987 578888876 57766
Q ss_pred ccccccccCCCCccccCcCCCCCeEEEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecCcccc
Q psy4525 131 RSFVGWYNGLPEDASLDLSLDCEEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRGALQV 210 (388)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~vvVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~~~~~ 210 (388)
.++...... ....+++++|||+|++|+|+|..|. +.+ .+|+++.|.+.+..
T Consensus 159 ~~~~~~~~~--------l~~~~~~vvViGgG~~g~e~A~~l~--------------------~~g-~~Vtlv~~~~~~l~ 209 (466)
T 3l8k_A 159 DDIFGYKTS--------FRKLPQDMVIIGAGYIGLEIASIFR--------------------LMG-VQTHIIEMLDRALI 209 (466)
T ss_dssp HHHHSTTCS--------CCSCCSEEEEECCSHHHHHHHHHHH--------------------HTT-CEEEEECSSSSSCT
T ss_pred HHHHHHHHH--------HhhCCCeEEEECCCHHHHHHHHHHH--------------------HcC-CEEEEEEeCCcCCC
Confidence 665521111 1123689999999999999999876 233 57999999987655
Q ss_pred cCCHHHHHHHhcCCCceEEecccccccchhhhccccchhhHHHHHHHhhCCCCCCCCCCceeEEEEecCcceeeeeCCCC
Q psy4525 211 AFTIKEFREMTKLPHVQTVFRNEQLCGVHEASATLARPRKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTEFKLNDNG 290 (388)
Q Consensus 211 ~~~~~el~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~ 290 (388)
.+.++++. +.+.+.+ . |++++++.++++..++++
T Consensus 210 ~~~d~~~~-----------------------------------~~l~~~l---------~--v~i~~~~~v~~i~~~~~~ 243 (466)
T 3l8k_A 210 TLEDQDIV-----------------------------------NTLLSIL---------K--LNIKFNSPVTEVKKIKDD 243 (466)
T ss_dssp TSCCHHHH-----------------------------------HHHHHHH---------C--CCEECSCCEEEEEEEETT
T ss_pred CCCCHHHH-----------------------------------HHHHhcC---------E--EEEEECCEEEEEEEcCCC
Confidence 43222222 1111111 2 889999999999864313
Q ss_pred ceeEEEEccCccccCCceeEEecceEEEccccCCccC--C--CCCcccCCCccccCCCC
Q psy4525 291 AITGINFANQQALVTEDTELIPSGIAFRSIGYQSRCV--D--SDIPFNEKSCTVIPKEG 345 (388)
Q Consensus 291 ~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~p~~~--~--~~l~~~~~~gi~l~~~~ 345 (388)
.+ .+.+.+ ..++.+++++|.||+|+|++||+. . .++++++++ +.+|+..
T Consensus 244 ~v-~v~~~~----~~G~~~~i~~D~vi~a~G~~p~~~l~l~~~gl~~~~~G-i~vd~~~ 296 (466)
T 3l8k_A 244 EY-EVIYST----KDGSKKSIFTNSVVLAAGRRPVIPEGAREIGLSISKTG-IVVDETM 296 (466)
T ss_dssp EE-EEEECC----TTSCCEEEEESCEEECCCEEECCCTTTGGGTCCBCSSS-BCCCTTC
T ss_pred cE-EEEEEe----cCCceEEEEcCEEEECcCCCcccccchhhcCceeCCCC-EeECCCc
Confidence 33 244421 023335899999999999999985 2 356666554 7777543
No 35
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=99.92 E-value=9.8e-25 Score=217.01 Aligned_cols=248 Identities=15% Similarity=0.205 Sum_probs=160.0
Q ss_pred CCCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCce-eeCCCCCCc--------------------------
Q psy4525 11 QLKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLV-RYGVAPDHP-------------------------- 63 (388)
Q Consensus 11 ~~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~-~~g~~p~~~-------------------------- 63 (388)
+..+||+||||||||+++|..|++ .|.+|+|||+.+.+||.| +.|+.|...
T Consensus 23 m~~~dVvVIGgG~aGl~aA~~la~--~G~~V~liEk~~~~GG~~~~~gciP~k~l~~~~~~~~~~~~~~~~~g~~~~~~~ 100 (491)
T 3urh_A 23 MMAYDLIVIGSGPGGYVCAIKAAQ--LGMKVAVVEKRSTYGGTCLNVGCIPSKALLHASEMFHQAQHGLEALGVEVANPK 100 (491)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHH--TTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHSSGGGTEECCCCE
T ss_pred cccCCEEEECCCHHHHHHHHHHHH--CCCeEEEEecCCCCCCccccccchhhHHHHHHHHHHHHHHhhHhhcCcccCCCc
Confidence 345899999999999999999999 899999999988999976 334332210
Q ss_pred -ch-----------hHHHHHHHHhhcCCCcEEEceEEEEE-----Eeeeccc---ccccCEEEEeeCCCCCCCCCCCCCC
Q psy4525 64 -EV-----------KNVINTFTKTGDNPRVNFYGNICLGQ-----DISLGDL---TNAYHAVVLTYGADNDKKLNIPGED 123 (388)
Q Consensus 64 -~~-----------~~~~~~~~~~~~~~~i~~~~~~~v~~-----~~~~~~~---~~~yd~lvlAtG~~~~~~~~i~g~~ 123 (388)
.. ..+...+...+++.+++++.+..... .+...+. ...||+||||||+.++ ++||.+
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~v~~~~g~~~~~~~d~lViATGs~p~---~ipg~~ 177 (491)
T 3urh_A 101 LNLQKMMAHKDATVKSNVDGVSFLFKKNKIDGFQGTGKVLGQGKVSVTNEKGEEQVLEAKNVVIATGSDVA---GIPGVE 177 (491)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEECSSSEEEEECTTSCEEEEECSEEEECCCEECC---CBTTBC
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEecCCEEEEEeCCCceEEEEeCEEEEccCCCCC---CCCCcc
Confidence 00 11112233445567888876654321 1232222 2479999999998753 455543
Q ss_pred ----CCCeeecccccccccCCCCccccCcCCCCCeEEEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEE
Q psy4525 124 ----GKNIISARSFVGWYNGLPEDASLDLSLDCEEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSV 199 (388)
Q Consensus 124 ----~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V 199 (388)
...+++..++. .....+++++|||+|++|+|+|..|. +.+ .+|
T Consensus 178 ~~~~~~~~~~~~~~~------------~~~~~~~~vvViGgG~~g~E~A~~l~--------------------~~g-~~V 224 (491)
T 3urh_A 178 VAFDEKTIVSSTGAL------------ALEKVPASMIVVGGGVIGLELGSVWA--------------------RLG-AKV 224 (491)
T ss_dssp CCCCSSSEECHHHHT------------SCSSCCSEEEEECCSHHHHHHHHHHH--------------------HHT-CEE
T ss_pred cccCCeeEEehhHhh------------hhhhcCCeEEEECCCHHHHHHHHHHH--------------------HcC-CEE
Confidence 22344443332 12234789999999999999999876 123 479
Q ss_pred EEEeecCcccccCCHHHHHHHhcCCCceEEecccccccchhhhccccchhhHHHHHHHhhCCCCCCCCCCceeEEEEecC
Q psy4525 200 NLVGRRGALQVAFTIKEFREMTKLPHVQTVFRNEQLCGVHEASATLARPRKRLTELILKTSNPDESKSNCSKYFRPIFLR 279 (388)
Q Consensus 200 ~~i~r~~~~~~~~~~~el~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~ 279 (388)
+++.+.+.+...+.+ ++. +.+.+.+. +.||++++++
T Consensus 225 tlv~~~~~~l~~~d~-~~~-------------------------------~~l~~~l~------------~~gV~v~~~~ 260 (491)
T 3urh_A 225 TVVEFLDTILGGMDG-EVA-------------------------------KQLQRMLT------------KQGIDFKLGA 260 (491)
T ss_dssp EEECSSSSSSSSSCH-HHH-------------------------------HHHHHHHH------------HTTCEEECSE
T ss_pred EEEeccccccccCCH-HHH-------------------------------HHHHHHHH------------hCCCEEEECC
Confidence 999998876543321 111 12222222 5799999999
Q ss_pred cceeeeeCCCCceeEEEEccCccccCCceeEEecceEEEccccCCccCC-----CCCcccCCCccccCCCC
Q psy4525 280 SPTEFKLNDNGAITGINFANQQALVTEDTELIPSGIAFRSIGYQSRCVD-----SDIPFNEKSCTVIPKEG 345 (388)
Q Consensus 280 ~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~p~~~~-----~~l~~~~~~gi~l~~~~ 345 (388)
.++++..+++ ...+.+.+. .+++.++++||.||+|+|++|+... .++.+++++.+.+|+..
T Consensus 261 ~v~~i~~~~~--~~~v~~~~~---~~g~~~~i~~D~Vi~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~ 326 (491)
T 3urh_A 261 KVTGAVKSGD--GAKVTFEPV---KGGEATTLDAEVVLIATGRKPSTDGLGLAKAGVVLDSRGRVEIDRHF 326 (491)
T ss_dssp EEEEEEEETT--EEEEEEEET---TSCCCEEEEESEEEECCCCEECCTTSCHHHHTCCBCTTSCBCCCTTC
T ss_pred eEEEEEEeCC--EEEEEEEec---CCCceEEEEcCEEEEeeCCccCCCccCchhcCceECCCCCEeECCCC
Confidence 9999986432 233444321 1244478999999999999999842 35667766667777654
No 36
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=99.92 E-value=6.5e-25 Score=217.58 Aligned_cols=247 Identities=15% Similarity=0.162 Sum_probs=162.9
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCce-eeCCCCCC--------------------------cch
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLV-RYGVAPDH--------------------------PEV 65 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~-~~g~~p~~--------------------------~~~ 65 (388)
.+||+||||||||+++|..|++ .|.+|+|||++ .+||.| ++||.|.. ...
T Consensus 20 ~~dVvIIGgG~aGl~aA~~la~--~G~~V~liE~~-~~GG~~~~~gc~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~ 96 (478)
T 3dk9_A 20 SYDYLVIGGGSGGLASARRAAE--LGARAAVVESH-KLGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGFPSCEGKFNW 96 (478)
T ss_dssp ECSEEEECCSHHHHHHHHHHHH--TTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTSCCCCCCCCH
T ss_pred CCCEEEECCCHHHHHHHHHHHh--CCCeEEEEecC-CCCCcccccCccchHHHHHHHHHHHHHHHHHhcCccCCCCccCH
Confidence 4899999999999999999999 89999999977 677775 33332210 011
Q ss_pred -----------hHHHHHHHHhhcCCCcEEEceEEEEE-----EeeecccccccCEEEEeeCCCCCCCC---CCCCCCCCC
Q psy4525 66 -----------KNVINTFTKTGDNPRVNFYGNICLGQ-----DISLGDLTNAYHAVVLTYGADNDKKL---NIPGEDGKN 126 (388)
Q Consensus 66 -----------~~~~~~~~~~~~~~~i~~~~~~~v~~-----~~~~~~~~~~yd~lvlAtG~~~~~~~---~i~g~~~~~ 126 (388)
+.+...+...++..+++++.+..... .+..+.....||+||+|||+.+ +.+ ++||.+ .
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~~~~~~~~v~~~g~~~~~d~lviAtG~~p-~~p~~~~i~G~~--~ 173 (478)
T 3dk9_A 97 RVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTSDPKPTIEVSGKKYTAPHILIATGGMP-STPHESQIPGAS--L 173 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEECSCSSCEEEETTEEEECSCEEECCCEEE-CCCCTTTSTTGG--G
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEeeCCeEEEEECCEEEEeeEEEEccCCCC-CCCCcCCCCCCc--e
Confidence 12222334455667888876654321 2333333458999999999987 466 788765 3
Q ss_pred eeecccccccccCCCCccccCcCCCCCeEEEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecC
Q psy4525 127 IISARSFVGWYNGLPEDASLDLSLDCEEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRG 206 (388)
Q Consensus 127 v~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~ 206 (388)
+++..++.. ....+++++|||+|++|+|+|..|. +.+ .+|+++.|.+
T Consensus 174 ~~~~~~~~~------------~~~~~~~vvViGgG~~g~E~A~~l~--------------------~~g-~~Vtlv~~~~ 220 (478)
T 3dk9_A 174 GITSDGFFQ------------LEELPGRSVIVGAGYIAVEMAGILS--------------------ALG-SKTSLMIRHD 220 (478)
T ss_dssp SBCHHHHTT------------CCSCCSEEEEECCSHHHHHHHHHHH--------------------HTT-CEEEEECSSS
T ss_pred eEchHHhhc------------hhhcCccEEEECCCHHHHHHHHHHH--------------------HcC-CeEEEEEeCC
Confidence 333333331 1123689999999999999999876 233 5799999988
Q ss_pred cccccCCHHHHHHHhcCCCceEEecccccccchhhhccccchhhHHHHHHHhhCCCCCCCCCCceeEEEEecCcceeeee
Q psy4525 207 ALQVAFTIKEFREMTKLPHVQTVFRNEQLCGVHEASATLARPRKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTEFKL 286 (388)
Q Consensus 207 ~~~~~~~~~el~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~ 286 (388)
.+...+. +++. +.+.+.+. +.||++++++.++++..
T Consensus 221 ~~l~~~d-~~~~-------------------------------~~~~~~l~------------~~gv~i~~~~~v~~i~~ 256 (478)
T 3dk9_A 221 KVLRSFD-SMIS-------------------------------TNCTEELE------------NAGVEVLKFSQVKEVKK 256 (478)
T ss_dssp SSCTTSC-HHHH-------------------------------HHHHHHHH------------HTTCEEETTEEEEEEEE
T ss_pred ccccccC-HHHH-------------------------------HHHHHHHH------------HCCCEEEeCCEEEEEEE
Confidence 7653322 1211 12222222 57999999999999987
Q ss_pred CCCCceeEEEEccCccccCCc--eeEEecceEEEccccCCccCC-----CCCcccCCCccccCCCC
Q psy4525 287 NDNGAITGINFANQQALVTED--TELIPSGIAFRSIGYQSRCVD-----SDIPFNEKSCTVIPKEG 345 (388)
Q Consensus 287 ~~~~~v~~v~~~~~~~~~~~~--~~~l~~D~Vi~a~G~~p~~~~-----~~l~~~~~~gi~l~~~~ 345 (388)
++++....+.+.+.. .++ ++++++|.||+|+|++||+.. .++++++++++.+|+..
T Consensus 257 ~~~~~~~~v~~~~~~---~g~~~g~~~~~D~vi~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~ 319 (478)
T 3dk9_A 257 TLSGLEVSMVTAVPG---RLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQ 319 (478)
T ss_dssp CSSSEEEEEEECCTT---SCCEEEEEEEESEEEECSCEEESCTTSCGGGGTCCBCTTCCBCCCTTC
T ss_pred cCCCcEEEEEEccCC---CCcccceEEEcCEEEEeeccccCCCCCCchhcCCeeCCCCCEeeCCCc
Confidence 544523345443210 121 378999999999999999842 35666666668877654
No 37
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=99.92 E-value=6.3e-25 Score=218.77 Aligned_cols=243 Identities=14% Similarity=0.131 Sum_probs=165.7
Q ss_pred CcEEEECccHHHHHHHHHHHhhCC-CCcEEEEcCCCCCCCce-eeCCCCCC----------------------------c
Q psy4525 14 PNVCIVGSGPAGFYCAQQILKLLP-QSTVDIYEKLPVPFGLV-RYGVAPDH----------------------------P 63 (388)
Q Consensus 14 ~~vvIIGaG~aGl~aA~~l~~~~~-g~~v~lie~~~~~gg~~-~~g~~p~~----------------------------~ 63 (388)
++|+|||||+||+++|..|++..+ |.+|+|||+++ +||.| ++|+.|.. .
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~-~GG~~~~~g~~psk~l~~~a~~~~~~~~~~~~g~~~~~~~~~~ 81 (499)
T 1xdi_A 3 TRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG-IGGAAVLDDCVPSKTFIASTGLRTELRRAPHLGFHIDFDDAKI 81 (499)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHTTTTTTTBC------CB
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC-cCCcccCcCccchHHHHHHHHHHHHHHHHHhCCCccccCCCcc
Confidence 689999999999999999999433 99999999997 88765 33322210 0
Q ss_pred chhH-----------HHHHHHHhhcCCCcEEEceEEEE---------EE--eeeccc---ccccCEEEEeeCCCCCCCCC
Q psy4525 64 EVKN-----------VINTFTKTGDNPRVNFYGNICLG---------QD--ISLGDL---TNAYHAVVLTYGADNDKKLN 118 (388)
Q Consensus 64 ~~~~-----------~~~~~~~~~~~~~i~~~~~~~v~---------~~--~~~~~~---~~~yd~lvlAtG~~~~~~~~ 118 (388)
.... +...+.+.+++.+++++.++... .. +...+. ...||+||+|||+.+ +.++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~~~~~~~~~V~~~~g~~~~~~~d~lviATGs~p-~~p~ 160 (499)
T 1xdi_A 82 SLPQIHARVKTLAAAQSADITAQLLSMGVQVIAGRGELIDSTPGLARHRIKATAADGSTSEHEADVVLVATGASP-RILP 160 (499)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEECCSSSCCSSEEEEEECTTSCEEEEEESEEEECCCEEE-CCCG
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCcccCCCCEEEEEeCCCcEEEEEeCEEEEcCCCCC-CCCC
Confidence 1111 22234556667889988776432 11 222223 348999999999987 4777
Q ss_pred CCCCCCCCeeecccccccccCCCCccccCcCCCCCeEEEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcE
Q psy4525 119 IPGEDGKNIISARSFVGWYNGLPEDASLDLSLDCEEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKS 198 (388)
Q Consensus 119 i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (388)
++|.+..++++..++... ...+++++|||+|.+|+|+|..|. ..+ .+
T Consensus 161 i~g~~~~~v~~~~~~~~~------------~~~~~~vvViGgG~ig~E~A~~l~--------------------~~g-~~ 207 (499)
T 1xdi_A 161 SAQPDGERILTWRQLYDL------------DALPDHLIVVGSGVTGAEFVDAYT--------------------ELG-VP 207 (499)
T ss_dssp GGCCCSSSEEEGGGGGGC------------SSCCSSEEEESCSHHHHHHHHHHH--------------------HTT-CC
T ss_pred CCCCCcCcEEehhHhhhh------------hccCCeEEEECCCHHHHHHHHHHH--------------------HcC-Ce
Confidence 888776677776665521 123689999999999999999775 233 47
Q ss_pred EEEEeecCcccccCCHHHHHHHhcCCCceEEecccccccchhhhccccchhhHHHHHHHhhCCCCCCCCCCceeEEEEec
Q psy4525 199 VNLVGRRGALQVAFTIKEFREMTKLPHVQTVFRNEQLCGVHEASATLARPRKRLTELILKTSNPDESKSNCSKYFRPIFL 278 (388)
Q Consensus 199 V~~i~r~~~~~~~~~~~el~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~ 278 (388)
|+++.|.+.+...+. +++. +.+.+.+. +.||+++++
T Consensus 208 Vtlv~~~~~~l~~~d-~~~~-------------------------------~~l~~~l~------------~~GV~i~~~ 243 (499)
T 1xdi_A 208 VTVVASQDHVLPYED-ADAA-------------------------------LVLEESFA------------ERGVRLFKN 243 (499)
T ss_dssp EEEECSSSSSSCCSS-HHHH-------------------------------HHHHHHHH------------HTTCEEETT
T ss_pred EEEEEcCCccccccC-HHHH-------------------------------HHHHHHHH------------HCCCEEEeC
Confidence 999999877643322 1211 12222222 579999999
Q ss_pred CcceeeeeCCCCceeEEEEccCccccCCceeEEecceEEEccccCCccCC-----CCCcccCCCccccCCCC
Q psy4525 279 RSPTEFKLNDNGAITGINFANQQALVTEDTELIPSGIAFRSIGYQSRCVD-----SDIPFNEKSCTVIPKEG 345 (388)
Q Consensus 279 ~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~p~~~~-----~~l~~~~~~gi~l~~~~ 345 (388)
+.++++..++ +.+ .+. ++++++++||.||+|+|++||+.. .++++++++++.+|+..
T Consensus 244 ~~V~~i~~~~-~~v-~v~--------~~~g~~i~aD~Vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~~ 305 (499)
T 1xdi_A 244 ARAASVTRTG-AGV-LVT--------MTDGRTVEGSHALMTIGSVPNTSGLGLERVGIQLGRGNYLTVDRVS 305 (499)
T ss_dssp CCEEEEEECS-SSE-EEE--------ETTSCEEEESEEEECCCEEECCSSSCTTTTTCCCBTTTBCCCCSSS
T ss_pred CEEEEEEEeC-CEE-EEE--------ECCCcEEEcCEEEECCCCCcCCCcCCchhcCceECCCCCEEECCCc
Confidence 9999998653 233 232 245568999999999999999831 35666655558877653
No 38
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=99.92 E-value=6.4e-25 Score=216.83 Aligned_cols=243 Identities=10% Similarity=0.115 Sum_probs=162.1
Q ss_pred CcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCce-eeCCCCCCc--------------------------chh
Q psy4525 14 PNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLV-RYGVAPDHP--------------------------EVK 66 (388)
Q Consensus 14 ~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~-~~g~~p~~~--------------------------~~~ 66 (388)
++|+||||||||+++|..|++ .|.+|+|||+. .+||.| .+++.|... ...
T Consensus 4 ~dvvIIGaG~aGl~aA~~l~~--~G~~V~liE~~-~~gG~~~~~g~~psk~ll~~~~~~~~~~~~~~~~g~~~~~~~~~~ 80 (464)
T 2a8x_A 4 YDVVVLGAGPGGYVAAIRAAQ--LGLSTAIVEPK-YWGGVCLNVGCIPSKALLRNAELVHIFTKDAKAFGISGEVTFDYG 80 (464)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--TTCCEEEECSS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHHTTTTTEEECCEECHH
T ss_pred CCEEEECCCHHHHHHHHHHHh--CCCeEEEEeCC-CCCCcccccCchhhHHHHHHHHHHHHHHHHHHhcCCCCCCccCHH
Confidence 689999999999999999999 89999999998 677765 233322210 011
Q ss_pred H-----------HHHHHHHhhcCCCcEEEceEEEE-----EEeeeccc---ccccCEEEEeeCCCCCCCCCCCCCCCCCe
Q psy4525 67 N-----------VINTFTKTGDNPRVNFYGNICLG-----QDISLGDL---TNAYHAVVLTYGADNDKKLNIPGEDGKNI 127 (388)
Q Consensus 67 ~-----------~~~~~~~~~~~~~i~~~~~~~v~-----~~~~~~~~---~~~yd~lvlAtG~~~~~~~~i~g~~~~~v 127 (388)
. +...+.+.+++.+++++.++.+. ..+...+. ...||+||+|||+.+ +.++++|.+.. +
T Consensus 81 ~~~~~~~~~~~~l~~~l~~~~~~~gv~~~~g~~~~id~~~v~V~~~~G~~~~~~~d~lViAtG~~~-~~~~~~g~~~~-~ 158 (464)
T 2a8x_A 81 IAYDRSRKVAEGRVAGVHFLMKKNKITEIHGYGTFADANTLLVDLNDGGTESVTFDNAIIATGSST-RLVPGTSLSAN-V 158 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEESSSSEEEEEETTSCCEEEEEEEEEECCCEEE-CCCTTCCCBTT-E
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCeEEEEeCCCceEEEEcCEEEECCCCCC-CCCCCCCCCce-E
Confidence 1 11223445566789998877642 12333333 348999999999987 46777776533 5
Q ss_pred eecccccccccCCCCccccCcCCCCCeEEEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecCc
Q psy4525 128 ISARSFVGWYNGLPEDASLDLSLDCEEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRGA 207 (388)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~~ 207 (388)
++..++.. ....+++++|||+|++|+|+|..|. +.+ .+|+++.|.+.
T Consensus 159 ~~~~~~~~------------~~~~~~~vvViGgG~~g~E~A~~l~--------------------~~g-~~Vtlv~~~~~ 205 (464)
T 2a8x_A 159 VTYEEQIL------------SRELPKSIIIAGAGAIGMEFGYVLK--------------------NYG-VDVTIVEFLPR 205 (464)
T ss_dssp ECHHHHHT------------CSSCCSEEEEECCSHHHHHHHHHHH--------------------HTT-CEEEEECSSSS
T ss_pred EecHHHhh------------ccccCCeEEEECCcHHHHHHHHHHH--------------------HcC-CeEEEEEcCCc
Confidence 55544431 1123689999999999999999876 233 47999999977
Q ss_pred ccccCCHHHHHHHhcCCCceEEecccccccchhhhccccchhhHHHHHHHhhCCCCCCCCCCceeEEEEecCcceeeeeC
Q psy4525 208 LQVAFTIKEFREMTKLPHVQTVFRNEQLCGVHEASATLARPRKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTEFKLN 287 (388)
Q Consensus 208 ~~~~~~~~el~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~ 287 (388)
+...+. +++. +.+.+.+. +.||++++++.++++..+
T Consensus 206 ~l~~~~-~~~~-------------------------------~~l~~~l~------------~~gv~i~~~~~v~~i~~~ 241 (464)
T 2a8x_A 206 ALPNED-ADVS-------------------------------KEIEKQFK------------KLGVTILTATKVESIADG 241 (464)
T ss_dssp SSTTSC-HHHH-------------------------------HHHHHHHH------------HHTCEEECSCEEEEEEEC
T ss_pred cccccC-HHHH-------------------------------HHHHHHHH------------HcCCEEEeCcEEEEEEEc
Confidence 643322 2221 12222222 579999999999999865
Q ss_pred CCCceeEEEEccCccccCCceeEEecceEEEccccCCccCC-----CCCcccCCCccccCCCC
Q psy4525 288 DNGAITGINFANQQALVTEDTELIPSGIAFRSIGYQSRCVD-----SDIPFNEKSCTVIPKEG 345 (388)
Q Consensus 288 ~~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~p~~~~-----~~l~~~~~~gi~l~~~~ 345 (388)
+ +.+ .+.+.+ .++.++++||.||+|+|++||+.. .++.+++++++.+|+..
T Consensus 242 ~-~~~-~v~~~~-----~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~~ 297 (464)
T 2a8x_A 242 G-SQV-TVTVTK-----DGVAQELKAEKVLQAIGFAPNVEGYGLDKAGVALTDRKAIGVDDYM 297 (464)
T ss_dssp S-SCE-EEEEES-----SSCEEEEEESEEEECSCEEECCSSSCHHHHTCCBCTTSSBCCCTTS
T ss_pred C-CeE-EEEEEc-----CCceEEEEcCEEEECCCCCccCCCCCchhcCCccCCCCCEeECcCC
Confidence 3 222 333321 234468999999999999999742 34666655568887754
No 39
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=99.92 E-value=1.5e-24 Score=214.76 Aligned_cols=246 Identities=13% Similarity=0.187 Sum_probs=162.5
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCC------CCCce-eeCCCCCC----------------------
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPV------PFGLV-RYGVAPDH---------------------- 62 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~------~gg~~-~~g~~p~~---------------------- 62 (388)
..+||+||||||||+++|..|++ .|.+|+|||+.+. +||.| +.||.|..
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~--~G~~V~liEk~~~~gG~~~~GG~~~~~gciPsk~l~~~~~~~~~~~~~~~~~g~~ 79 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQ--LGLKTALIEKYKGKEGKTALGGTCLNVGCIPSKALLDSSYKFHEAHESFKLHGIS 79 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHH--HTCCEEEEECCBCTTSSBCCSHHHHHHSHHHHHHHHHHHHHHHHHHTTSGGGTEE
T ss_pred CcCCEEEECcCHHHHHHHHHHHh--CCCEEEEEeCCCccCCCCCcCCccccccHHHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 35899999999999999999999 7999999999863 45544 22332210
Q ss_pred -----cchh-----------HHHHHHHHhhcCCCcEEEceEEEEE-----Eeeeccc---ccccCEEEEeeCCCCCCCCC
Q psy4525 63 -----PEVK-----------NVINTFTKTGDNPRVNFYGNICLGQ-----DISLGDL---TNAYHAVVLTYGADNDKKLN 118 (388)
Q Consensus 63 -----~~~~-----------~~~~~~~~~~~~~~i~~~~~~~v~~-----~~~~~~~---~~~yd~lvlAtG~~~~~~~~ 118 (388)
.... .+...+...+++.+++++.+..... .+...+. ...||+||+|||+.+. .++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~-~~~ 158 (476)
T 3lad_A 80 TGEVAIDVPTMIARKDQIVRNLTGGVASLIKANGVTLFEGHGKLLAGKKVEVTAADGSSQVLDTENVILASGSKPV-EIP 158 (476)
T ss_dssp CSCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESEEEECSTTCEEEECTTSCEEEECCSCEEECCCEEEC-CCT
T ss_pred cCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCEEEEEcCCCceEEEEcCEEEEcCCCCCC-CCC
Confidence 0011 1112223344556888876664421 2333232 2479999999999873 555
Q ss_pred CCCCCCCCeeecccccccccCCCCccccCcCCCCCeEEEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcE
Q psy4525 119 IPGEDGKNIISARSFVGWYNGLPEDASLDLSLDCEEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKS 198 (388)
Q Consensus 119 i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (388)
.++.+...++++.++.. ....+++++|||+|++|+|+|..|. +.+ .+
T Consensus 159 ~~~~~~~~v~~~~~~~~------------~~~~~~~v~ViGgG~~g~e~A~~l~--------------------~~g-~~ 205 (476)
T 3lad_A 159 PAPVDQDVIVDSTGALD------------FQNVPGKLGVIGAGVIGLELGSVWA--------------------RLG-AE 205 (476)
T ss_dssp TSCCCSSSEEEHHHHTS------------CSSCCSEEEEECCSHHHHHHHHHHH--------------------HTT-CE
T ss_pred CCCCCcccEEechhhhc------------cccCCCeEEEECCCHHHHHHHHHHH--------------------HcC-Cc
Confidence 55555667777766552 1224689999999999999999876 233 57
Q ss_pred EEEEeecCcccccCCHHHHHHHhcCCCceEEecccccccchhhhccccchhhHHHHHHHhhCCCCCCCCCCceeEEEEec
Q psy4525 199 VNLVGRRGALQVAFTIKEFREMTKLPHVQTVFRNEQLCGVHEASATLARPRKRLTELILKTSNPDESKSNCSKYFRPIFL 278 (388)
Q Consensus 199 V~~i~r~~~~~~~~~~~el~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~ 278 (388)
|+++.|.+.+...+.+ ++. +.+.+.+. +.||+++++
T Consensus 206 Vtlv~~~~~~l~~~~~-~~~-------------------------------~~l~~~l~------------~~Gv~v~~~ 241 (476)
T 3lad_A 206 VTVLEAMDKFLPAVDE-QVA-------------------------------KEAQKILT------------KQGLKILLG 241 (476)
T ss_dssp EEEEESSSSSSTTSCH-HHH-------------------------------HHHHHHHH------------HTTEEEEET
T ss_pred EEEEecCCCcCcccCH-HHH-------------------------------HHHHHHHH------------hCCCEEEEC
Confidence 9999999876543221 111 12222222 579999999
Q ss_pred CcceeeeeCCCCceeEEEEccCccccCCce-eEEecceEEEccccCCccCC-----CCCcccCCCccccCCCC
Q psy4525 279 RSPTEFKLNDNGAITGINFANQQALVTEDT-ELIPSGIAFRSIGYQSRCVD-----SDIPFNEKSCTVIPKEG 345 (388)
Q Consensus 279 ~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~-~~l~~D~Vi~a~G~~p~~~~-----~~l~~~~~~gi~l~~~~ 345 (388)
+.++++..+++ . ..+.+.+ +++ +++++|.||+|+|++|++.. .++.+++++++.+|+..
T Consensus 242 ~~v~~i~~~~~-~-~~v~~~~------~~g~~~~~~D~vi~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~~~ 306 (476)
T 3lad_A 242 ARVTGTEVKNK-Q-VTVKFVD------AEGEKSQAFDKLIVAVGRRPVTTDLLAADSGVTLDERGFIYVDDYC 306 (476)
T ss_dssp CEEEEEEECSS-C-EEEEEES------SSEEEEEEESEEEECSCEEECCTTCCSSCCSCCBCTTSCBCCCTTS
T ss_pred CEEEEEEEcCC-E-EEEEEEe------CCCcEEEECCEEEEeeCCcccCCCCCccccCccccCCCCEeeCCCc
Confidence 99999986542 2 2344432 223 68999999999999999731 45667766667777654
No 40
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=99.92 E-value=1.2e-24 Score=216.10 Aligned_cols=246 Identities=18% Similarity=0.256 Sum_probs=162.8
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEc--------CCCCCCCce-eeCCCCCC---------------------
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYE--------KLPVPFGLV-RYGVAPDH--------------------- 62 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie--------~~~~~gg~~-~~g~~p~~--------------------- 62 (388)
.+||+||||||+|+++|..|++. .|.+|+||| +...+||.| +.||.|..
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~-~G~~V~liE~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~a~~~~~~~~~~~~g~~ 81 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASL-HKKRVAVIDLQKHHGPPHYAALGGTCVNVGCVPKKLMVTGANYMDTIRESAGFGWE 81 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHH-HCCCEEEEESCSSSBTTTBSCTTCHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEE
T ss_pred cccEEEECCCHHHHHHHHHHHHH-cCCEEEEEecccccccccCCCcCccccCCCcchhhHHHHHHHHHHHHHHHHhcCcc
Confidence 47999999999999999999983 389999999 355788876 33443321
Q ss_pred -------cchhH-----------HHHHHHHhhcCC-CcEEEceEEEEE---Eeeec-----cc----ccccCEEEEeeCC
Q psy4525 63 -------PEVKN-----------VINTFTKTGDNP-RVNFYGNICLGQ---DISLG-----DL----TNAYHAVVLTYGA 111 (388)
Q Consensus 63 -------~~~~~-----------~~~~~~~~~~~~-~i~~~~~~~v~~---~~~~~-----~~----~~~yd~lvlAtG~ 111 (388)
....+ +...+...+++. +++++.+..... .+.+. +. ...||+||+|||+
T Consensus 82 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~~~~i~~~~v~v~~~~~~~g~~~~~~~~d~lviAtGs 161 (490)
T 1fec_A 82 LDRESVRPNWKALIAAKNKAVSGINDSYEGMFADTEGLTFHQGFGALQDNHTVLVRESADPNSAVLETLDTEYILLATGS 161 (490)
T ss_dssp CCGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEEEESEEEEEETTEEEEESSSSTTSCEEEEEEEEEEEECCCE
T ss_pred cCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeEEEEeeCCEEEEEeeccCCCCceEEEEcCEEEEeCCC
Confidence 01111 122334455677 999887764322 23331 22 3489999999999
Q ss_pred CCCCCCCCCCCCCCCeeecccccccccCCCCccccCcCCCCCeEEEEcCChHHHHHHHHhccCCcccccccCchhHHHhh
Q psy4525 112 DNDKKLNIPGEDGKNIISARSFVGWYNGLPEDASLDLSLDCEEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKL 191 (388)
Q Consensus 112 ~~~~~~~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~ 191 (388)
.+ +.|++||.+ .+++..++.. ....+++++|||+|++|+|+|..|. .+
T Consensus 162 ~p-~~p~i~g~~--~~~~~~~~~~------------~~~~~~~vvViGgG~ig~E~A~~l~-----------------~~ 209 (490)
T 1fec_A 162 WP-QHLGIEGDD--LCITSNEAFY------------LDEAPKRALCVGGGYISIEFAGIFN-----------------AY 209 (490)
T ss_dssp EE-CCCCSBTGG--GCBCHHHHTT------------CSSCCSEEEEECSSHHHHHHHHHHH-----------------HH
T ss_pred CC-CCCCCCCcc--ceecHHHHhh------------hhhcCCeEEEECCCHHHHHHHHHHH-----------------hh
Confidence 87 467788763 4454444431 1123689999999999999999876 11
Q ss_pred hcCCCcEEEEEeecCcccccCCHHHHHHHhcCCCceEEecccccccchhhhccccchhhHHHHHHHhhCCCCCCCCCCce
Q psy4525 192 STSRIKSVNLVGRRGALQVAFTIKEFREMTKLPHVQTVFRNEQLCGVHEASATLARPRKRLTELILKTSNPDESKSNCSK 271 (388)
Q Consensus 192 ~~~~~~~V~~i~r~~~~~~~~~~~el~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (388)
. ....+|++++|.+.+...+.+ ++ .+.+.+.+. +.
T Consensus 210 ~-~~g~~Vtlv~~~~~~l~~~d~-~~-------------------------------~~~l~~~l~------------~~ 244 (490)
T 1fec_A 210 K-ARGGQVDLAYRGDMILRGFDS-EL-------------------------------RKQLTEQLR------------AN 244 (490)
T ss_dssp S-CTTCEEEEEESSSSSSTTSCH-HH-------------------------------HHHHHHHHH------------HT
T ss_pred c-cCcCeEEEEEcCCCcccccCH-HH-------------------------------HHHHHHHHH------------hC
Confidence 0 113579999999875433221 11 112222222 57
Q ss_pred eEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEecceEEEccccCCccC---C--CCCcccCCCccccCCCC
Q psy4525 272 YFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPSGIAFRSIGYQSRCV---D--SDIPFNEKSCTVIPKEG 345 (388)
Q Consensus 272 gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~p~~~---~--~~l~~~~~~gi~l~~~~ 345 (388)
||++++++.++++..++++. ..+++ .++++++||.||+|+|++||+. . .++.+++++++.+|+..
T Consensus 245 GV~i~~~~~v~~i~~~~~~~-~~v~~--------~~G~~i~~D~vv~a~G~~p~~~~L~l~~~gl~~~~~G~I~Vd~~~ 314 (490)
T 1fec_A 245 GINVRTHENPAKVTKNADGT-RHVVF--------ESGAEADYDVVMLAIGRVPRSQTLQLEKAGVEVAKNGAIKVDAYS 314 (490)
T ss_dssp TEEEEETCCEEEEEECTTSC-EEEEE--------TTSCEEEESEEEECSCEEESCTTSCGGGGTCCBCTTSCBCCCTTC
T ss_pred CCEEEeCCEEEEEEEcCCCE-EEEEE--------CCCcEEEcCEEEEccCCCcCccccCchhcCccCCCCCCEEECCCC
Confidence 99999999999998654332 34443 3345899999999999999973 1 35666666668887654
No 41
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.92 E-value=3.3e-24 Score=204.61 Aligned_cols=245 Identities=17% Similarity=0.189 Sum_probs=165.2
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCC-------CCCCc--chhHHHHHHHHhhcCCCcE
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGV-------APDHP--EVKNVINTFTKTGDNPRVN 82 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~-------~p~~~--~~~~~~~~~~~~~~~~~i~ 82 (388)
..++|+||||||||+++|..|++ .|++|+|||+.+.+||.|..-. .|..+ ...++..++.+.+.+++++
T Consensus 13 ~~~dvvIIG~G~aGl~aA~~l~~--~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 90 (360)
T 3ab1_A 13 DMRDLTIIGGGPTGIFAAFQCGM--NNISCRIIESMPQLGGQLAALYPEKHIYDVAGFPEVPAIDLVESLWAQAERYNPD 90 (360)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHHTTCCE
T ss_pred CCCCEEEECCCHHHHHHHHHHHh--CCCCEEEEecCCCCCCcccccCCCcccccCCCCCCCCHHHHHHHHHHHHHHhCCE
Confidence 35799999999999999999999 8999999999988988774211 02222 3467778888888888998
Q ss_pred EEceEEEEE---------Eeeeccc-ccccCEEEEeeCCCC--CCCCCCCC-CC-CC--CeeecccccccccCCCCcccc
Q psy4525 83 FYGNICLGQ---------DISLGDL-TNAYHAVVLTYGADN--DKKLNIPG-ED-GK--NIISARSFVGWYNGLPEDASL 146 (388)
Q Consensus 83 ~~~~~~v~~---------~~~~~~~-~~~yd~lvlAtG~~~--~~~~~i~g-~~-~~--~v~~~~~~~~~~~~~~~~~~~ 146 (388)
++.++.+.. .+...+. ...||+||+|||+.+ ++.+++|| .+ .. +++.. +. +
T Consensus 91 ~~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~li~AtG~~~~~~~~~~i~g~~~~~~~~~v~~~------~~---~---- 157 (360)
T 3ab1_A 91 VVLNETVTKYTKLDDGTFETRTNTGNVYRSRAVLIAAGLGAFEPRKLPQLGNIDHLTGSSVYYA------VK---S---- 157 (360)
T ss_dssp EECSCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCTTCSCCBCCCGGGCCCTTTBTTTEESS------CS---C----
T ss_pred EEcCCEEEEEEECCCceEEEEECCCcEEEeeEEEEccCCCcCCCCCCCCCCchhhCcCceEEEe------cC---C----
Confidence 887755432 1222233 347999999999843 24556777 43 11 12111 00 1
Q ss_pred CcCCCCCeEEEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecCcccccCCHHHHHHHhcCCCc
Q psy4525 147 DLSLDCEEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRGALQVAFTIKEFREMTKLPHV 226 (388)
Q Consensus 147 ~~~~~~~~vvVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~~~~~~~~~~el~~l~~~~~~ 226 (388)
.....+++|+|||+|++|+|+|..|. ....+|+++.|++.+... +++
T Consensus 158 ~~~~~~~~vvVvG~G~~g~e~A~~l~---------------------~~g~~V~lv~~~~~~~~~---~~~--------- 204 (360)
T 3ab1_A 158 VEDFKGKRVVIVGGGDSALDWTVGLI---------------------KNAASVTLVHRGHEFQGH---GKT--------- 204 (360)
T ss_dssp GGGGTTCEEEEECSSHHHHHHHHHTT---------------------TTSSEEEEECSSSSCSSC---SHH---------
T ss_pred HHHcCCCcEEEECCCHHHHHHHHHHH---------------------hcCCEEEEEEcCCCCCCC---HHH---------
Confidence 11235799999999999999999886 224589999998754221 000
Q ss_pred eEEecccccccchhhhccccchhhHHHHHHHhhCCCCCCCCCCceeEEEEecCcceeeeeCCCCceeEEEEccCccccCC
Q psy4525 227 QTVFRNEQLCGVHEASATLARPRKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTE 306 (388)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~ 306 (388)
.+++.+.+ .+.||++++++.++++..+ ++.+..+.+.. ..+
T Consensus 205 ----------------------~~~l~~~~------------~~~gv~i~~~~~v~~i~~~-~~~v~~v~~~~----~~g 245 (360)
T 3ab1_A 205 ----------------------AHEVERAR------------ANGTIDVYLETEVASIEES-NGVLTRVHLRS----SDG 245 (360)
T ss_dssp ----------------------HHSSHHHH------------HHTSEEEESSEEEEEEEEE-TTEEEEEEEEE----TTC
T ss_pred ----------------------HHHHHHHh------------hcCceEEEcCcCHHHhccC-CCceEEEEEEe----cCC
Confidence 01111111 1468999999999999864 36666676531 123
Q ss_pred ceeEEecceEEEccccCCccC-C--CCCcccCCCccccCCC
Q psy4525 307 DTELIPSGIAFRSIGYQSRCV-D--SDIPFNEKSCTVIPKE 344 (388)
Q Consensus 307 ~~~~l~~D~Vi~a~G~~p~~~-~--~~l~~~~~~gi~l~~~ 344 (388)
+.+++++|.||+|+|++|+.. . .+++++ .+++.+|+.
T Consensus 246 ~~~~i~~D~vi~a~G~~p~~~~l~~~~~~~~-~g~i~vd~~ 285 (360)
T 3ab1_A 246 SKWTVEADRLLILIGFKSNLGPLARWDLELY-ENALVVDSH 285 (360)
T ss_dssp CEEEEECSEEEECCCBCCSCGGGGGSSCCEE-TTEEECCTT
T ss_pred CeEEEeCCEEEECCCCCCCHHHHHhhccccc-cCeeeecCC
Confidence 346899999999999999862 2 355565 567777764
No 42
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=99.92 E-value=1.9e-26 Score=222.11 Aligned_cols=234 Identities=14% Similarity=0.138 Sum_probs=157.1
Q ss_pred CCCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCC---CCCCcchhHHHHHHHHhhcCCCcEEEceE
Q psy4525 11 QLKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGV---APDHPEVKNVINTFTKTGDNPRVNFYGNI 87 (388)
Q Consensus 11 ~~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~---~p~~~~~~~~~~~~~~~~~~~~i~~~~~~ 87 (388)
.++.+|+|||||+||++||..|.. .+.+|+|||+++.++. .+... .+.....+++..+..+++++.+++++.++
T Consensus 7 ~~~~~~vIvGgG~AGl~aA~~L~~--~~~~itlie~~~~~~y-~~~~l~~~l~g~~~~~~l~~~~~~~~~~~~i~~~~~~ 83 (385)
T 3klj_A 7 HKSTKILILGAGPAGFSAAKAALG--KCDDITMINSEKYLPY-YRPRLNEIIAKNKSIDDILIKKNDWYEKNNIKVITSE 83 (385)
T ss_dssp -CBCSEEEECCSHHHHHHHHHHTT--TCSCEEEECSSSSCCB-CGGGHHHHHHSCCCGGGTBSSCHHHHHHTTCEEECSC
T ss_pred cCCCCEEEEcCcHHHHHHHHHHhC--CCCEEEEEECCCCCCc-ccChhhHHHcCCCCHHHccCCCHHHHHHCCCEEEeCC
Confidence 566899999999999999999966 8999999999977541 11110 01112223333334455566799999886
Q ss_pred EEEE------Eeeecccc-cccCEEEEeeCCCCCCCCCCCCCCCCCeeecccccccccCCCCccccCcCCCCCeEEEEcC
Q psy4525 88 CLGQ------DISLGDLT-NAYHAVVLTYGADNDKKLNIPGEDGKNIISARSFVGWYNGLPEDASLDLSLDCEEATILGQ 160 (388)
Q Consensus 88 ~v~~------~~~~~~~~-~~yd~lvlAtG~~~~~~~~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVIGg 160 (388)
.+.. .+++.+.+ ..||+||+|||+.+ +.|++||.+ ++++.+++...... . .....+++|+|||+
T Consensus 84 ~V~~id~~~~~v~~~~g~~~~yd~lvlAtG~~p-~~p~i~G~~--~v~~~~~~~d~~~l----~--~~l~~~~~vvVIGg 154 (385)
T 3klj_A 84 FATSIDPNNKLVTLKSGEKIKYEKLIIASGSIA-NKIKVPHAD--EIFSLYSYDDALKI----K--DECKNKGKAFIIGG 154 (385)
T ss_dssp CEEEEETTTTEEEETTSCEEECSEEEECCCEEE-CCCCCTTCS--CEECCSSHHHHHHH----H--HHHHHHSCEEEECC
T ss_pred EEEEEECCCCEEEECCCCEEECCEEEEecCCCc-CCCCCCCCC--CeEEeCCHHHHHHH----H--HHhhcCCeEEEECC
Confidence 5532 24555443 48999999999987 578899987 77766554422110 0 00112689999999
Q ss_pred ChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecCcccccCCHHHHHHHhcCCCceEEecccccccchh
Q psy4525 161 GNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRGALQVAFTIKEFREMTKLPHVQTVFRNEQLCGVHE 240 (388)
Q Consensus 161 G~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~~~~~~~~~~el~~l~~~~~~~~~~~~~~~~~~~~ 240 (388)
|++|+|+|..|. +.+ .+||++.|.+.+.....++++.+
T Consensus 155 G~~g~E~A~~l~--------------------~~g-~~Vtvv~~~~~~l~~~~~~~~~~--------------------- 192 (385)
T 3klj_A 155 GILGIELAQAII--------------------DSG-TPASIGIILEYPLERQLDRDGGL--------------------- 192 (385)
T ss_dssp SHHHHHHHHHHH--------------------HHT-CCEEEECSSSSSCTTTSCHHHHH---------------------
T ss_pred CHHHHHHHHHHH--------------------hCC-CeEEEEEcCCccchhhcCHHHHH---------------------
Confidence 999999999886 223 47999999987655433233221
Q ss_pred hhccccchhhHHHHHHHhhCCCCCCCCCCceeEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEecceEEEcc
Q psy4525 241 ASATLARPRKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPSGIAFRSI 320 (388)
Q Consensus 241 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~ 320 (388)
.+.+.+. +.||+++++..++++ +++++||.||+|+
T Consensus 193 ----------~~~~~l~------------~~gV~~~~~~~v~~i-----------------------g~~~~~D~vv~a~ 227 (385)
T 3klj_A 193 ----------FLKDKLD------------RLGIKIYTNSNFEEM-----------------------GDLIRSSCVITAV 227 (385)
T ss_dssp ----------HHHHHHH------------TTTCEEECSCCGGGC-----------------------HHHHHHSEEEECC
T ss_pred ----------HHHHHHH------------hCCCEEEeCCEEEEc-----------------------CeEEecCeEEECc
Confidence 1222222 578999988887766 2368999999999
Q ss_pred ccCCccC-C--CCCcccCCCccccCCCC
Q psy4525 321 GYQSRCV-D--SDIPFNEKSCTVIPKEG 345 (388)
Q Consensus 321 G~~p~~~-~--~~l~~~~~~gi~l~~~~ 345 (388)
|++||+. . .++..+ +|+.+|+..
T Consensus 228 G~~p~~~~~~~~gl~~~--~gi~vd~~~ 253 (385)
T 3klj_A 228 GVKPNLDFIKDTEIASK--RGILVNDHM 253 (385)
T ss_dssp CEEECCGGGTTSCCCBS--SSEEECTTC
T ss_pred CcccChhhhhhcCCCcC--CCEEECCCc
Confidence 9999963 2 345543 678887654
No 43
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.92 E-value=1.1e-24 Score=218.39 Aligned_cols=164 Identities=16% Similarity=0.217 Sum_probs=119.4
Q ss_pred CCcEEEECccHHHHHHHHHHH-hhCCCCcEEEEcCCCCCCCceeeCCCCCC---------------------------cc
Q psy4525 13 KPNVCIVGSGPAGFYCAQQIL-KLLPQSTVDIYEKLPVPFGLVRYGVAPDH---------------------------PE 64 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~-~~~~g~~v~lie~~~~~gg~~~~g~~p~~---------------------------~~ 64 (388)
.++|+|||||+||+++|..|+ + .|.+|+|||+.+.+||.|.....|.. ..
T Consensus 8 ~~dVvIIGaG~aGl~aA~~L~~~--~G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~~~~~~~ 85 (540)
T 3gwf_A 8 TVDAVVIGAGFGGIYAVHKLHHE--LGLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWKTTYIT 85 (540)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT--TCCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCCSBSEEE
T ss_pred CCCEEEECcCHHHHHHHHHHHHc--CCCCEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCCCcccCCC
Confidence 479999999999999999999 7 89999999999999998843211211 12
Q ss_pred hhHHHHHHHHhhcCCCc--EEEceEEEEE----------Eeeecccc-cccCEEEEeeCC--CCCCCCCCCCCC-CC-Ce
Q psy4525 65 VKNVINTFTKTGDNPRV--NFYGNICLGQ----------DISLGDLT-NAYHAVVLTYGA--DNDKKLNIPGED-GK-NI 127 (388)
Q Consensus 65 ~~~~~~~~~~~~~~~~i--~~~~~~~v~~----------~~~~~~~~-~~yd~lvlAtG~--~~~~~~~i~g~~-~~-~v 127 (388)
..++..++.+.++++++ ++++++.|.. .++..+++ ..||+||+|||. .+ +.|++||.+ .. .+
T Consensus 86 ~~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~~s~p-~~p~ipG~~~f~g~~ 164 (540)
T 3gwf_A 86 QPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGLLSAI-NFPNLPGLDTFEGET 164 (540)
T ss_dssp HHHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCSCCSB-CCCCCTTGGGCCSEE
T ss_pred HHHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCcccccC-CCCCCCCccccCCCE
Confidence 45677777777777777 6776655532 23333433 479999999995 44 577888865 22 23
Q ss_pred eecccccccccCCCCccccCcCCCCCeEEEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecCc
Q psy4525 128 ISARSFVGWYNGLPEDASLDLSLDCEEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRGA 207 (388)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~~ 207 (388)
++...+.. .....+|+|+|||+|.+|+|+|..|+ ..+.+||++.|++.
T Consensus 165 ~~~~~~~~-----------~~~~~~krV~VIG~G~sgve~a~~l~---------------------~~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 165 IHTAAWPE-----------GKSLAGRRVGVIGTGSTGQQVITSLA---------------------PEVEHLTVFVRTPQ 212 (540)
T ss_dssp EEGGGCCS-----------SCCCTTSEEEEECCSHHHHHHHHHHT---------------------TTCSEEEEEESSCC
T ss_pred EEeecCCC-----------ccccccceEEEECCCchHHHHHHHHH---------------------hhCCEEEEEECCCC
Confidence 44433321 23356899999999999999999887 33568999999998
Q ss_pred cccc
Q psy4525 208 LQVA 211 (388)
Q Consensus 208 ~~~~ 211 (388)
+..+
T Consensus 213 ~i~p 216 (540)
T 3gwf_A 213 YSVP 216 (540)
T ss_dssp CEEE
T ss_pred cccc
Confidence 7554
No 44
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=99.92 E-value=2.6e-24 Score=213.31 Aligned_cols=248 Identities=17% Similarity=0.204 Sum_probs=162.0
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCcee-eCCCCCCc----------------------------
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVR-YGVAPDHP---------------------------- 63 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~-~g~~p~~~---------------------------- 63 (388)
.++|+||||||||+++|..|++ .|.+|+|||+.+.+||.|. .++.|...
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~--~G~~V~liE~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~gi~~~~~~~~ 82 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQ--LGFNTACVEKRGKLGGTCLNVGCIPSKALLNNSHLFHQMHTEAQKRGIDVNGDIKI 82 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH--TTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTSGGGTEEECSCEEE
T ss_pred cCCEEEECCCHHHHHHHHHHHH--CCCeEEEEecCCCcCCccceeccHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCcc
Confidence 3799999999999999999999 8999999999888888762 23222110
Q ss_pred chhHH-----------HHHHHHhhcCCCcEEEceEEEE-----EEeeecc---cc------cccCEEEEeeCCCCCCCCC
Q psy4525 64 EVKNV-----------INTFTKTGDNPRVNFYGNICLG-----QDISLGD---LT------NAYHAVVLTYGADNDKKLN 118 (388)
Q Consensus 64 ~~~~~-----------~~~~~~~~~~~~i~~~~~~~v~-----~~~~~~~---~~------~~yd~lvlAtG~~~~~~~~ 118 (388)
...++ ...+.+.+++.+++++.++.+. ..+...+ .. ..||+||+|||+.+. .
T Consensus 83 ~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~v~V~~~~G~~~~~~~~~~i~~d~lViAtGs~p~---~ 159 (478)
T 1v59_A 83 NVANFQKAKDDAVKQLTGGIELLFKKNKVTYYKGNGSFEDETKIRVTPVDGLEGTVKEDHILDVKNIIVATGSEVT---P 159 (478)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEESSSSEEEEECCTTCTTCCSSCEEEEEEEEEECCCEEEC---C
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCeEEEEecCCCcccccccceEEeCEEEECcCCCCC---C
Confidence 01111 1123344556789988776543 1233222 23 679999999998763 2
Q ss_pred CCCCCCC--CeeecccccccccCCCCccccCcCCCCCeEEEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCC
Q psy4525 119 IPGEDGK--NIISARSFVGWYNGLPEDASLDLSLDCEEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRI 196 (388)
Q Consensus 119 i~g~~~~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (388)
+||.+.. .+++..++... ...+++++|||+|++|+|+|..|. +.+
T Consensus 160 ~~g~~~~~~~v~~~~~~~~~------------~~~~~~vvViGgG~~g~e~A~~l~--------------------~~g- 206 (478)
T 1v59_A 160 FPGIEIDEEKIVSSTGALSL------------KEIPKRLTIIGGGIIGLEMGSVYS--------------------RLG- 206 (478)
T ss_dssp CTTCCCCSSSEECHHHHTTC------------SSCCSEEEEECCSHHHHHHHHHHH--------------------HTT-
T ss_pred CCCCCCCCceEEcHHHHHhh------------hccCceEEEECCCHHHHHHHHHHH--------------------HcC-
Confidence 4454333 35555544311 113689999999999999999876 234
Q ss_pred cEEEEEeecCcccccCCHHHHHHHhcCCCceEEecccccccchhhhccccchhhHHHHHHHhhCCCCCCCCCCceeEEEE
Q psy4525 197 KSVNLVGRRGALQVAFTIKEFREMTKLPHVQTVFRNEQLCGVHEASATLARPRKRLTELILKTSNPDESKSNCSKYFRPI 276 (388)
Q Consensus 197 ~~V~~i~r~~~~~~~~~~~el~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 276 (388)
.+||++.|++.+...+. +++. +.+.+.+. +.||+++
T Consensus 207 ~~Vtlv~~~~~~l~~~~-~~~~-------------------------------~~l~~~l~------------~~gv~i~ 242 (478)
T 1v59_A 207 SKVTVVEFQPQIGASMD-GEVA-------------------------------KATQKFLK------------KQGLDFK 242 (478)
T ss_dssp CEEEEECSSSSSSSSSC-HHHH-------------------------------HHHHHHHH------------HTTCEEE
T ss_pred CEEEEEEeCCccccccC-HHHH-------------------------------HHHHHHHH------------HCCCEEE
Confidence 47999999987644322 2221 12222222 5799999
Q ss_pred ecCcceeeeeCCCCceeEEEEccCccccCCceeEEecceEEEccccCCccC---C--CCCcccCCCccccCCCC
Q psy4525 277 FLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPSGIAFRSIGYQSRCV---D--SDIPFNEKSCTVIPKEG 345 (388)
Q Consensus 277 ~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~p~~~---~--~~l~~~~~~gi~l~~~~ 345 (388)
+++.++++..++++....+.+.+. .++++++++||.||+|+|++||+. . .++.+++++.+.+|+..
T Consensus 243 ~~~~v~~i~~~~~~~~~~v~~~~~---~~g~~~~~~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~ 313 (478)
T 1v59_A 243 LSTKVISAKRNDDKNVVEIVVEDT---KTNKQENLEAEVLLVAVGRRPYIAGLGAEKIGLEVDKRGRLVIDDQF 313 (478)
T ss_dssp CSEEEEEEEEETTTTEEEEEEEET---TTTEEEEEEESEEEECSCEEECCTTSCTTTTTCCBCTTSCBCCCTTS
T ss_pred eCCEEEEEEEecCCCeEEEEEEEc---CCCCceEEECCEEEECCCCCcCCCCCCchhcCceeCCCCCEeECcCC
Confidence 999999998521233344544311 134567899999999999999973 1 35666655558777654
No 45
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=99.92 E-value=7e-25 Score=221.79 Aligned_cols=252 Identities=15% Similarity=0.137 Sum_probs=164.8
Q ss_pred CcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCC----CCCCc-chhHHHHHHHHhhcCCCcEEEceEE
Q psy4525 14 PNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGV----APDHP-EVKNVINTFTKTGDNPRVNFYGNIC 88 (388)
Q Consensus 14 ~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~----~p~~~-~~~~~~~~~~~~~~~~~i~~~~~~~ 88 (388)
++|+||||||||+++|..|++..++.+|+|||+++.++. .+++. ..... ....+..+...+.++++++++.++.
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 80 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVSF-ANCGLPYHISGEIAQRSALVLQTPESFKARFNVEVRVKHE 80 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSSB-CGGGHHHHHTSSSCCGGGGBCCCHHHHHHHHCCEEETTEE
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCccc-cccCchHHhcCCcCChHHhhccCHHHHHHhcCcEEEECCE
Confidence 689999999999999999999555899999999987641 11111 00011 1111222233334446888887777
Q ss_pred EEE------Eeeecc---c---ccccCEEEEeeCCCCCCCCCCCCCCCCCeeecccccccccCCCCccccCcCCCCCeEE
Q psy4525 89 LGQ------DISLGD---L---TNAYHAVVLTYGADNDKKLNIPGEDGKNIISARSFVGWYNGLPEDASLDLSLDCEEAT 156 (388)
Q Consensus 89 v~~------~~~~~~---~---~~~yd~lvlAtG~~~~~~~~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~vv 156 (388)
+.. .+++.. . ...||+||+|||+.+ +.+++||.+.+++++...+..... .........+++|+
T Consensus 81 V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p-~~p~ipG~~~~~v~~~~~~~~~~~----l~~~~~~~~~~~vv 155 (565)
T 3ntd_A 81 VVAIDRAAKLVTVRRLLDGSEYQESYDTLLLSPGAAP-IVPPIPGVDNPLTHSLRNIPDMDR----ILQTIQMNNVEHAT 155 (565)
T ss_dssp EEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEE-CCCCCTTCCSTTEECCSSHHHHHH----HHHHHHHTTCSEEE
T ss_pred EEEEECCCCEEEEEecCCCCeEEEECCEEEECCCCCC-CCCCCCCCCCCCEEEeCCHHHHHH----HHHHHhhCCCCEEE
Confidence 632 133321 2 247999999999987 578899988778877665432100 00000113468999
Q ss_pred EEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecCcccccCCHHHHHHHhcCCCceEEecccccc
Q psy4525 157 ILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRGALQVAFTIKEFREMTKLPHVQTVFRNEQLC 236 (388)
Q Consensus 157 VIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~~~~~~~~~~el~~l~~~~~~~~~~~~~~~~ 236 (388)
|||+|++|+|+|..|. +.+ .+|+++.|.+.+...+. +++.
T Consensus 156 ViGgG~~g~e~A~~l~--------------------~~g-~~Vtlv~~~~~~l~~~~-~~~~------------------ 195 (565)
T 3ntd_A 156 VVGGGFIGLEMMESLH--------------------HLG-IKTTLLELADQVMTPVD-REMA------------------ 195 (565)
T ss_dssp EECCSHHHHHHHHHHH--------------------HTT-CEEEEEESSSSSCTTSC-HHHH------------------
T ss_pred EECCCHHHHHHHHHHH--------------------hcC-CcEEEEEcCCccchhcC-HHHH------------------
Confidence 9999999999999876 233 57999999986644322 2211
Q ss_pred cchhhhccccchhhHHHHHHHhhCCCCCCCCCCceeEEEEecCcceeeeeC------------------CCCceeEEEEc
Q psy4525 237 GVHEASATLARPRKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTEFKLN------------------DNGAITGINFA 298 (388)
Q Consensus 237 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~------------------~~~~v~~v~~~ 298 (388)
..+.+.+. +.||++++++.++++..+ .++.+ .+.
T Consensus 196 -------------~~l~~~l~------------~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~-- 247 (565)
T 3ntd_A 196 -------------GFAHQAIR------------DQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHL-SLT-- 247 (565)
T ss_dssp -------------HHHHHHHH------------HTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEE-EEE--
T ss_pred -------------HHHHHHHH------------HCCCEEEeCCeEEEEeccccccccccccccccccccCCCcE-EEE--
Confidence 12222222 579999999999999862 12222 222
Q ss_pred cCccccCCceeEEecceEEEccccCCccC---CCCCcccCCCccccCCCC
Q psy4525 299 NQQALVTEDTELIPSGIAFRSIGYQSRCV---DSDIPFNEKSCTVIPKEG 345 (388)
Q Consensus 299 ~~~~~~~~~~~~l~~D~Vi~a~G~~p~~~---~~~l~~~~~~gi~l~~~~ 345 (388)
..++++++||.||+|+|++|++. ..++++++++++.+|+..
T Consensus 248 ------~~~g~~i~~D~vi~a~G~~p~~~l~~~~g~~~~~~g~i~vd~~~ 291 (565)
T 3ntd_A 248 ------LSNGELLETDLLIMAIGVRPETQLARDAGLAIGELGGIKVNAMM 291 (565)
T ss_dssp ------ETTSCEEEESEEEECSCEEECCHHHHHHTCCBCTTSSBCCCTTC
T ss_pred ------EcCCCEEEcCEEEECcCCccchHHHHhCCcccCCCCCEEECCCc
Confidence 23456899999999999999963 146777777778887653
No 46
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.92 E-value=3.7e-24 Score=214.77 Aligned_cols=172 Identities=15% Similarity=0.208 Sum_probs=119.2
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCCCCC---------------------------Ccc
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPD---------------------------HPE 64 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~~p~---------------------------~~~ 64 (388)
..++|+|||||+||+++|..|++ .|.+|+|||+.+.+||.|.....|. +..
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~--~g~~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~~~~~ 85 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQ--AGMKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSENFAS 85 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSBSSCB
T ss_pred CCCCEEEECccHHHHHHHHHHHh--CCCCEEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccccCCCccccCCC
Confidence 45799999999999999999999 8999999999999999985443331 123
Q ss_pred hhHHHHHHHHhhcCCCc--EEEceEEEEE----------Eeeeccc-ccccCEEEEeeC--CCCCCCCCCCCCCC-C-Ce
Q psy4525 65 VKNVINTFTKTGDNPRV--NFYGNICLGQ----------DISLGDL-TNAYHAVVLTYG--ADNDKKLNIPGEDG-K-NI 127 (388)
Q Consensus 65 ~~~~~~~~~~~~~~~~i--~~~~~~~v~~----------~~~~~~~-~~~yd~lvlAtG--~~~~~~~~i~g~~~-~-~v 127 (388)
..++..++.+.++++++ ++++++.|.. .+++.++ ...||+||+||| +.+ +.|++||.+. . .+
T Consensus 86 ~~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG~~s~p-~~p~ipG~~~f~g~~ 164 (545)
T 3uox_A 86 QPEMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATGPLSAS-RMPDIKGIDSFKGES 164 (545)
T ss_dssp HHHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCCSCBC----CCCTTGGGCCSEE
T ss_pred HHHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcCCCCCC-cCCCCCCccccCCCe
Confidence 45677777777776665 5666655432 2333333 247999999999 555 5788998652 2 24
Q ss_pred eecccccccccCCCCccccCcCCCCCeEEEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecCc
Q psy4525 128 ISARSFVGWYNGLPEDASLDLSLDCEEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRGA 207 (388)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~~ 207 (388)
++...+...+...+. .....+|+|+|||+|.+|+|+|..|+ ..+.+||++.|++.
T Consensus 165 ~h~~~~~~~~~~~~~----~~~~~~krV~VIG~G~tgve~a~~la---------------------~~~~~Vtv~~r~~~ 219 (545)
T 3uox_A 165 FHSSRWPTDAEGAPK----GVDFTGKRVGVIGTGATGVQIIPIAA---------------------ETAKELYVFQRTPN 219 (545)
T ss_dssp EEGGGCCBCTTSCBS----CCCCBTCEEEEECCSHHHHHHHHHHT---------------------TTBSEEEEEESSCC
T ss_pred EEccccccccccccc----ccccCCCeEEEECCCccHHHHHHHHH---------------------hhCCEEEEEEcCCC
Confidence 444443321111000 13446899999999999999999887 33568999999998
Q ss_pred cccc
Q psy4525 208 LQVA 211 (388)
Q Consensus 208 ~~~~ 211 (388)
+..+
T Consensus 220 ~i~p 223 (545)
T 3uox_A 220 WCTP 223 (545)
T ss_dssp CCEE
T ss_pred cccc
Confidence 7554
No 47
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=99.92 E-value=1.2e-24 Score=214.41 Aligned_cols=242 Identities=10% Similarity=0.105 Sum_probs=161.4
Q ss_pred CcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCce-eeCCCCCC-------------------------cchhH
Q psy4525 14 PNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLV-RYGVAPDH-------------------------PEVKN 67 (388)
Q Consensus 14 ~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~-~~g~~p~~-------------------------~~~~~ 67 (388)
+||+||||||||+++|..|++ .|.+|+|||+++.+||.| ++++.|.. ....+
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~--~g~~V~lie~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 79 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQ--LGMKVGVVEKEKALGGTCLRVGCIPSKALLETTERIYEAKKGLLGAKVKGVELDLPA 79 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--TTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHCCTTEEECCEEECHHH
T ss_pred CCEEEECCChhHHHHHHHHHH--CCCeEEEEeCCCCCCCccceecchhHHHHHHHHHHHHHHhhhcCCcccCCCccCHHH
Confidence 689999999999999999999 899999999998899886 33433321 01111
Q ss_pred H-----------HHHHHHhhcCCCcEEEceEEEEE---Eeeec--ccccccCEEEEeeCCCCCCCCCCCCCCCCCeeecc
Q psy4525 68 V-----------INTFTKTGDNPRVNFYGNICLGQ---DISLG--DLTNAYHAVVLTYGADNDKKLNIPGEDGKNIISAR 131 (388)
Q Consensus 68 ~-----------~~~~~~~~~~~~i~~~~~~~v~~---~~~~~--~~~~~yd~lvlAtG~~~~~~~~i~g~~~~~v~~~~ 131 (388)
+ ...+.+.+++.+++++.++.+.. .+.+. +....||+||+|||+.+ +.++++|.+..++++..
T Consensus 80 ~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~i~~~~~~v~~~g~~~~~d~lviAtG~~p-~~~~~~g~~~~~v~~~~ 158 (455)
T 2yqu_A 80 LMAHKDKVVQANTQGVEFLFKKNGIARHQGTARFLSERKVLVEETGEELEARYILIATGSAP-LIPPWAQVDYERVVTST 158 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEESSSSEEEETTTCCEEEEEEEEECCCEEE-CCCTTBCCCSSSEECHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCeEEEeeCCEEEEecEEEECCCCCC-CCCCCCCCCcCcEechH
Confidence 1 11223455566888887655421 12222 22348999999999987 47778886655677665
Q ss_pred cccccccCCCCccccCcCCCCCeEEEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecCccccc
Q psy4525 132 SFVGWYNGLPEDASLDLSLDCEEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRGALQVA 211 (388)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~vvVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~~~~~~ 211 (388)
++.. ....+++++|||+|.+|+|+|..|. +.+ .+|+++.+.+.+...
T Consensus 159 ~~~~------------~~~~~~~vvIiGgG~~g~e~A~~l~--------------------~~g-~~V~lv~~~~~~l~~ 205 (455)
T 2yqu_A 159 EALS------------FPEVPKRLIVVGGGVIGLELGVVWH--------------------RLG-AEVIVLEYMDRILPT 205 (455)
T ss_dssp HHTC------------CSSCCSEEEEECCSHHHHHHHHHHH--------------------HTT-CEEEEECSSSSSCTT
T ss_pred Hhhc------------cccCCCeEEEECCCHHHHHHHHHHH--------------------HcC-CEEEEEecCCccccc
Confidence 5541 1123689999999999999999775 233 479999998765332
Q ss_pred CCHHHHHHHhcCCCceEEecccccccchhhhccccchhhHHHHHHHhhCCCCCCCCCCceeEEEEecCcceeeeeCCCCc
Q psy4525 212 FTIKEFREMTKLPHVQTVFRNEQLCGVHEASATLARPRKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTEFKLNDNGA 291 (388)
Q Consensus 212 ~~~~el~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~ 291 (388)
+. +++. +.+.+.+. +.||++++++.++++..++ +.
T Consensus 206 ~~-~~~~-------------------------------~~l~~~l~------------~~Gv~i~~~~~V~~i~~~~-~~ 240 (455)
T 2yqu_A 206 MD-LEVS-------------------------------RAAERVFK------------KQGLTIRTGVRVTAVVPEA-KG 240 (455)
T ss_dssp SC-HHHH-------------------------------HHHHHHHH------------HHTCEEECSCCEEEEEEET-TE
T ss_pred cC-HHHH-------------------------------HHHHHHHH------------HCCCEEEECCEEEEEEEeC-CE
Confidence 11 1111 12222222 5789999999999998643 22
Q ss_pred eeEEEEccCccccCCceeEEecceEEEccccCCccCC-----CCCcccCCCccccCCCC
Q psy4525 292 ITGINFANQQALVTEDTELIPSGIAFRSIGYQSRCVD-----SDIPFNEKSCTVIPKEG 345 (388)
Q Consensus 292 v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~p~~~~-----~~l~~~~~~gi~l~~~~ 345 (388)
..+++ .+++++++|.||+|+|++|+... .++.+++++.+.+|+..
T Consensus 241 -v~v~~--------~~g~~i~~D~vv~A~G~~p~~~~l~~~~~g~~~~~~g~i~vd~~~ 290 (455)
T 2yqu_A 241 -ARVEL--------EGGEVLEADRVLVAVGRRPYTEGLSLENAGLSTDERGRIPVDEHL 290 (455)
T ss_dssp -EEEEE--------TTSCEEEESEEEECSCEEECCTTCCGGGGTCCCCTTSCCCCCTTS
T ss_pred -EEEEE--------CCCeEEEcCEEEECcCCCcCCCCCChhhcCCccCCCCcEeECCCc
Confidence 23332 24568999999999999998732 34555544447777653
No 48
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=99.92 E-value=1.5e-24 Score=214.64 Aligned_cols=253 Identities=14% Similarity=0.147 Sum_probs=155.8
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCCCCCC-----cchhH-------HHHHHHHhhcCCC
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDH-----PEVKN-------VINTFTKTGDNPR 80 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~~p~~-----~~~~~-------~~~~~~~~~~~~~ 80 (388)
+++|+|||||+||+++|..|++..++.+|+|||+++.++ ..+.+. |.+ ....+ +..+...+.++.+
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~-~~~~gl-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g 80 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRIS-YGGCGI-PYYVSGEVSNIESLQATPYNVVRDPEFFRINKD 80 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC---------------------------------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCccc-cccccc-chhhcCCCCchHHhccccchhccCHHHHhhhcC
Confidence 469999999999999999999955599999999998754 111122 211 11112 2233333444578
Q ss_pred cEEEceEEEEE------Eeeecc---c---ccccCEEEEeeCCCCCCCCCCCCCCCCCeeecccccccccCCCCccccCc
Q psy4525 81 VNFYGNICLGQ------DISLGD---L---TNAYHAVVLTYGADNDKKLNIPGEDGKNIISARSFVGWYNGLPEDASLDL 148 (388)
Q Consensus 81 i~~~~~~~v~~------~~~~~~---~---~~~yd~lvlAtG~~~~~~~~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~ 148 (388)
++++.++.+.. .+.+.. . ...||+||+|||+.+ +.+++||.+.+++++...+..... ......
T Consensus 81 i~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p-~~p~i~G~~~~~v~~~~~~~~~~~----l~~~l~ 155 (472)
T 3iwa_A 81 VEALVETRAHAIDRAAHTVEIENLRTGERRTLKYDKLVLALGSKA-NRPPVEGMDLAGVTPVTNLDEAEF----VQHAIS 155 (472)
T ss_dssp CEEECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEE-CCCSCTTTTSBTEEECCSHHHHHH----HHHHCC
T ss_pred cEEEECCEEEEEECCCCEEEEeecCCCCEEEEECCEEEEeCCCCc-CCCCCCCCCCCCEEEeCCHHHHHH----HHHHhh
Confidence 99888776632 133222 2 237999999999987 578899988778876655432110 000001
Q ss_pred CCCCCeEEEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecCcccccCCHHHHHHHhcCCCceE
Q psy4525 149 SLDCEEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRGALQVAFTIKEFREMTKLPHVQT 228 (388)
Q Consensus 149 ~~~~~~vvVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~~~~~~~~~~el~~l~~~~~~~~ 228 (388)
...+++++|||+|.+|+|+|..|. +....+|+++.|.+.+.....++++.
T Consensus 156 ~~~~~~vvViGgG~~g~e~A~~l~--------------------~~~g~~Vtlv~~~~~~l~~~~~~~~~---------- 205 (472)
T 3iwa_A 156 AGEVSKAVIVGGGFIGLEMAVSLA--------------------DMWGIDTTVVELADQIMPGFTSKSLS---------- 205 (472)
T ss_dssp TTSCSEEEEECCSHHHHHHHHHHH--------------------HHHCCEEEEECSSSSSSTTTSCHHHH----------
T ss_pred cCCCCEEEEECCCHHHHHHHHHHH--------------------HhcCCcEEEEEccCcccccccCHHHH----------
Confidence 124789999999999999999776 12025799999988765422222221
Q ss_pred EecccccccchhhhccccchhhHHHHHHHhhCCCCCCCCCCceeEEEEecCcceeeeeCCCCceeEEEEccCccccCCce
Q psy4525 229 VFRNEQLCGVHEASATLARPRKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDT 308 (388)
Q Consensus 229 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~ 308 (388)
+.+.+.+. +.||++++++.++++..+ ++.+. +.+ .++
T Consensus 206 ---------------------~~l~~~l~------------~~GV~i~~~~~v~~i~~~-~~~v~-v~~--------~~g 242 (472)
T 3iwa_A 206 ---------------------QMLRHDLE------------KNDVVVHTGEKVVRLEGE-NGKVA-RVI--------TDK 242 (472)
T ss_dssp ---------------------HHHHHHHH------------HTTCEEECSCCEEEEEES-SSBEE-EEE--------ESS
T ss_pred ---------------------HHHHHHHH------------hcCCEEEeCCEEEEEEcc-CCeEE-EEE--------eCC
Confidence 12222222 579999999999999863 34443 433 334
Q ss_pred eEEecceEEEccccCCccC---CCCCcccCCCccccCCCC
Q psy4525 309 ELIPSGIAFRSIGYQSRCV---DSDIPFNEKSCTVIPKEG 345 (388)
Q Consensus 309 ~~l~~D~Vi~a~G~~p~~~---~~~l~~~~~~gi~l~~~~ 345 (388)
++++||.||+|+|++|++. ..++++++++++.+|+..
T Consensus 243 ~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~~~g~i~vd~~~ 282 (472)
T 3iwa_A 243 RTLDADLVILAAGVSPNTQLARDAGLELDPRGAIIVDTRM 282 (472)
T ss_dssp CEEECSEEEECSCEEECCHHHHHHTCCBCTTCCEECCTTC
T ss_pred CEEEcCEEEECCCCCcCHHHHHhCCccCCCCCCEEECCCc
Confidence 5899999999999999863 146777777778887654
No 49
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=99.92 E-value=6.1e-24 Score=209.99 Aligned_cols=241 Identities=13% Similarity=0.145 Sum_probs=160.8
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCcee-eCCC------------------CCC-------c--
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVR-YGVA------------------PDH-------P-- 63 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~-~g~~------------------p~~-------~-- 63 (388)
..++|+||||||+|+++|..|++ .|.+|+|||++ .+||.|. .|+. |.+ .
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~--~g~~V~lie~~-~~GG~~~~~g~ip~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~ 79 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAVE--QGAQVTLIERG-TIGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGIAATVPTI 79 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESS-STTHHHHHHSHHHHHHHHHHHHHHHHHHCCTTTTTSCCCCCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHH--CCCEEEEEeCC-CCCccccCCCccchHHHHHHHHHHHHHhhhhhcCCccCCCCcc
Confidence 35799999999999999999999 89999999998 6787752 2211 111 0
Q ss_pred chhHHH-------HH-----HHHhhcCC-CcEEEceEEEEE-----Eeeeccc---ccccCEEEEeeCCCCCCCCCCCCC
Q psy4525 64 EVKNVI-------NT-----FTKTGDNP-RVNFYGNICLGQ-----DISLGDL---TNAYHAVVLTYGADNDKKLNIPGE 122 (388)
Q Consensus 64 ~~~~~~-------~~-----~~~~~~~~-~i~~~~~~~v~~-----~~~~~~~---~~~yd~lvlAtG~~~~~~~~i~g~ 122 (388)
....+. .. +.+.+++. +++++.+..... .+...+. ...||+||+|||+.+ +.|++||.
T Consensus 80 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~v~~~~g~~~~~~~d~lviAtGs~p-~~p~i~G~ 158 (467)
T 1zk7_A 80 DRSKLLAQQQARVDELRHAKYEGILGGNPAITVVHGEARFKDDQSLTVRLNEGGERVVMFDRCLVATGASP-AVPPIPGL 158 (467)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTHHHHTTCTTEEEEEEEEEEEETTEEEEEETTSSEEEEECSEEEECCCEEE-CCCCCTTT
T ss_pred CHHHHHHHHHHHHHHHhhhhHHHHHhccCCeEEEEEEEEEccCCEEEEEeCCCceEEEEeCEEEEeCCCCC-CCCCCCCC
Confidence 111211 11 23455666 899887653221 1333333 347999999999987 57789987
Q ss_pred CCCCeeecccccccccCCCCccccCcCCCCCeEEEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEE
Q psy4525 123 DGKNIISARSFVGWYNGLPEDASLDLSLDCEEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLV 202 (388)
Q Consensus 123 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i 202 (388)
+..++++..++... ...+++++|||+|++|+|+|..|. +.+ .+|+++
T Consensus 159 ~~~~~~~~~~~~~~------------~~~~~~vvViGgG~~g~E~A~~l~--------------------~~g-~~Vtlv 205 (467)
T 1zk7_A 159 KESPYWTSTEALAS------------DTIPERLAVIGSSVVALELAQAFA--------------------RLG-SKVTVL 205 (467)
T ss_dssp TTSCCBCHHHHHHC------------SSCCSEEEEECCSHHHHHHHHHHH--------------------HTT-CEEEEE
T ss_pred CcCceecHHHHhcc------------cccCCEEEEECCCHHHHHHHHHHH--------------------HcC-CEEEEE
Confidence 65556655554421 123789999999999999999876 233 479999
Q ss_pred eecCcccccCCHHHHHHHhcCCCceEEecccccccchhhhccccchhhHHHHHHHhhCCCCCCCCCCceeEEEEecCcce
Q psy4525 203 GRRGALQVAFTIKEFREMTKLPHVQTVFRNEQLCGVHEASATLARPRKRLTELILKTSNPDESKSNCSKYFRPIFLRSPT 282 (388)
Q Consensus 203 ~r~~~~~~~~~~~el~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~ 282 (388)
+|.+.+.. +. +++. +.+.+.+. +.||++++++.++
T Consensus 206 ~~~~~~l~-~~-~~~~-------------------------------~~l~~~l~------------~~Gv~i~~~~~v~ 240 (467)
T 1zk7_A 206 ARNTLFFR-ED-PAIG-------------------------------EAVTAAFR------------AEGIEVLEHTQAS 240 (467)
T ss_dssp CSSCTTTT-SC-HHHH-------------------------------HHHHHHHH------------HTTCEEETTCCEE
T ss_pred EECCccCC-CC-HHHH-------------------------------HHHHHHHH------------hCCCEEEcCCEEE
Confidence 99876543 22 2221 12222222 5799999999999
Q ss_pred eeeeCCCCceeEEEEccCccccCCceeEEecceEEEccccCCccCC-----CCCcccCCCccccCCCC
Q psy4525 283 EFKLNDNGAITGINFANQQALVTEDTELIPSGIAFRSIGYQSRCVD-----SDIPFNEKSCTVIPKEG 345 (388)
Q Consensus 283 ~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~p~~~~-----~~l~~~~~~gi~l~~~~ 345 (388)
++..++ ....+.+ + +.+++||.||+|+|++|+... .++++++++.+.+|+..
T Consensus 241 ~i~~~~--~~~~v~~--------~-~~~i~aD~Vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~ 297 (467)
T 1zk7_A 241 QVAHMD--GEFVLTT--------T-HGELRADKLLVATGRTPNTRSLALDAAGVTVNAQGAIVIDQGM 297 (467)
T ss_dssp EEEEET--TEEEEEE--------T-TEEEEESEEEECSCEEESCTTSCGGGGTCCBCTTSCBCCCTTC
T ss_pred EEEEeC--CEEEEEE--------C-CcEEEcCEEEECCCCCcCCCcCCchhcCCcCCCCCCEEECCCc
Confidence 998532 2333432 2 247999999999999999631 34556554447777643
No 50
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=99.91 E-value=2.3e-24 Score=212.78 Aligned_cols=246 Identities=12% Similarity=0.154 Sum_probs=160.2
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCce-eeCCCCCC-------------------------cchh
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLV-RYGVAPDH-------------------------PEVK 66 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~-~~g~~p~~-------------------------~~~~ 66 (388)
.++|+||||||||+++|..|++ .|.+|+|||+++ +||.| +.++.|.. ....
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~--~g~~V~lie~~~-~GG~~~~~g~iP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~ 82 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQ--LGLKVLAVEAGE-VGGVCLNVGCIPTKALLHAAETLHHLKVAEGFGLKAKPELDLK 82 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH--TTCCEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHHHHGGGTEECCCEECHH
T ss_pred cCCEEEECcCHHHHHHHHHHHH--CCCeEEEEeCCC-CCCCCCCcChHHHHHHHHHHHHHHHHHhHHhcCCCCCCCcCHH
Confidence 4799999999999999999999 899999999987 78876 33433321 0111
Q ss_pred HHHH-----------HHHHhhcCCCcEEEceEEEEE---EeeecccccccCEEEEeeCCCCCCCCC-CCCCCCCCeeecc
Q psy4525 67 NVIN-----------TFTKTGDNPRVNFYGNICLGQ---DISLGDLTNAYHAVVLTYGADNDKKLN-IPGEDGKNIISAR 131 (388)
Q Consensus 67 ~~~~-----------~~~~~~~~~~i~~~~~~~v~~---~~~~~~~~~~yd~lvlAtG~~~~~~~~-i~g~~~~~v~~~~ 131 (388)
.+.. .+...+++.+++++.++.+.. .+.+.+....||+||+|||+.+. .|+ +++. .++++..
T Consensus 83 ~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~v~v~g~~~~~d~lViATGs~p~-~p~gi~~~--~~v~~~~ 159 (464)
T 2eq6_A 83 KLGGWRDQVVKKLTGGVGTLLKGNGVELLRGFARLVGPKEVEVGGERYGAKSLILATGSEPL-ELKGFPFG--EDVWDST 159 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEETTEEEETTEEEEEEEEEECCCEEEC-CBTTBCCS--SSEECHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeeEEEccCCEEEEccEEEEeCEEEEcCCCCCC-CCCCCCCC--CcEEcHH
Confidence 1111 123445667899887765432 23343223489999999999874 443 6662 2566555
Q ss_pred cccccccCCCCccccCcCCCCCeEEEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecCccccc
Q psy4525 132 SFVGWYNGLPEDASLDLSLDCEEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRGALQVA 211 (388)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~vvVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~~~~~~ 211 (388)
++... . ...+++++|||+|.+|+|+|..|. +.+ .+|+++++.+.+...
T Consensus 160 ~~~~l----------~-~~~~~~vvViGgG~~g~e~A~~l~--------------------~~g-~~Vtlv~~~~~~l~~ 207 (464)
T 2eq6_A 160 RALKV----------E-EGLPKRLLVIGGGAVGLELGQVYR--------------------RLG-AEVTLIEYMPEILPQ 207 (464)
T ss_dssp HHTCG----------G-GCCCSEEEEECCSHHHHHHHHHHH--------------------HTT-CEEEEECSSSSSSTT
T ss_pred HHHhh----------h-hhcCCEEEEECCCHHHHHHHHHHH--------------------HCC-CeEEEEEcCCccccc
Confidence 54421 0 113689999999999999999776 234 479999998765432
Q ss_pred CCHHHHHHHhcCCCceEEecccccccchhhhccccchhhHHHHHHHhhCCCCCCCCCCceeEEEEecCcceeeeeCCCCc
Q psy4525 212 FTIKEFREMTKLPHVQTVFRNEQLCGVHEASATLARPRKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTEFKLNDNGA 291 (388)
Q Consensus 212 ~~~~el~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~ 291 (388)
+. +++. +.+.+.+. +.||++++++.++++..++ +.
T Consensus 208 ~~-~~~~-------------------------------~~l~~~l~------------~~gV~i~~~~~v~~i~~~~-~~ 242 (464)
T 2eq6_A 208 GD-PETA-------------------------------ALLRRALE------------KEGIRVRTKTKAVGYEKKK-DG 242 (464)
T ss_dssp SC-HHHH-------------------------------HHHHHHHH------------HTTCEEECSEEEEEEEEET-TE
T ss_pred cC-HHHH-------------------------------HHHHHHHH------------hcCCEEEcCCEEEEEEEeC-CE
Confidence 21 1211 12222222 5799999999999998643 22
Q ss_pred eeEEEEccCccccCCceeEEecceEEEccccCCccCC-----CCCcccCCCccccCCCC
Q psy4525 292 ITGINFANQQALVTEDTELIPSGIAFRSIGYQSRCVD-----SDIPFNEKSCTVIPKEG 345 (388)
Q Consensus 292 v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~p~~~~-----~~l~~~~~~gi~l~~~~ 345 (388)
..+.+.+. .+++.++++||.||+|+|++||+.. .++.+++++.+.+|+..
T Consensus 243 -~~v~~~~~---~~g~~~~i~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~ 297 (464)
T 2eq6_A 243 -LHVRLEPA---EGGEGEEVVVDKVLVAVGRKPRTEGLGLEKAGVKVDERGFIRVNARM 297 (464)
T ss_dssp -EEEEEEET---TCCSCEEEEESEEEECSCEEESCTTSSHHHHTCCBCTTSCBCCCTTC
T ss_pred -EEEEEeec---CCCceeEEEcCEEEECCCcccCCCCCChhhcCceecCCCCEEECCCc
Confidence 23443210 0122348999999999999999742 34566555558887654
No 51
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=99.91 E-value=8.1e-24 Score=208.74 Aligned_cols=209 Identities=14% Similarity=0.149 Sum_probs=144.6
Q ss_pred CcEEEECccHHHHHHHHHHHhhC-CCCc---EEEEcCCCCCCCceeeC----CC--------------------------
Q psy4525 14 PNVCIVGSGPAGFYCAQQILKLL-PQST---VDIYEKLPVPFGLVRYG----VA-------------------------- 59 (388)
Q Consensus 14 ~~vvIIGaG~aGl~aA~~l~~~~-~g~~---v~lie~~~~~gg~~~~g----~~-------------------------- 59 (388)
++|+||||||||+++|..|++.. .|.+ |+|||+.+.+||.|.+. +.
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~~~~~ 82 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKECLEFA 82 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGGTCBT
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhhcccC
Confidence 69999999999999999998732 4788 99999999999998652 10
Q ss_pred ------------CCCcchhHHHHHHHHhhcCCCcE--EEceEEEEE----------Eeeecc------cccccCEEEEee
Q psy4525 60 ------------PDHPEVKNVINTFTKTGDNPRVN--FYGNICLGQ----------DISLGD------LTNAYHAVVLTY 109 (388)
Q Consensus 60 ------------p~~~~~~~~~~~~~~~~~~~~i~--~~~~~~v~~----------~~~~~~------~~~~yd~lvlAt 109 (388)
+.+....++.+++.++++++++. +++++.|.. .+++.+ ....||+||+||
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~~~d~VVvAt 162 (464)
T 2xve_A 83 DYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEFDYVVCCT 162 (464)
T ss_dssp TBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECC
T ss_pred CCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEEEcCEEEECC
Confidence 11123456677777777777776 776665521 233322 224799999999
Q ss_pred C--CCCCCCCCCCCCCC-C-CeeecccccccccCCCCccccCcCCCCCeEEEEcCChHHHHHHHHhccCCcccccccCch
Q psy4525 110 G--ADNDKKLNIPGEDG-K-NIISARSFVGWYNGLPEDASLDLSLDCEEATILGQGNVAMDVARILLSPVDQLKSTDITE 185 (388)
Q Consensus 110 G--~~~~~~~~i~g~~~-~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVIGgG~sg~e~a~~L~~~~~~~~~~~~~~ 185 (388)
| +.+ +.|++||.+. + .++++.++.. ...+.+++|+|||+|++|+|+|..|+
T Consensus 163 G~~s~p-~~p~ipG~~~~~g~~~hs~~~~~-----------~~~~~~k~VvVVG~G~sg~eiA~~l~------------- 217 (464)
T 2xve_A 163 GHFSTP-YVPEFEGFEKFGGRILHAHDFRD-----------ALEFKDKTVLLVGSSYSAEDIGSQCY------------- 217 (464)
T ss_dssp CSSSSB-CCCCCBTTTTCCSEEEEGGGCCC-----------GGGGTTSEEEEECCSTTHHHHHHHHH-------------
T ss_pred CCCCCC-ccCCCCCcccCCceEEehhhhCC-----------HhHcCCCEEEEEcCCCCHHHHHHHHH-------------
Confidence 9 555 5778888753 3 3555555431 12245899999999999999999886
Q ss_pred hHHHhhhcCCCcEEEEEeecCcccccCCHHHHHHHhcCCCceEEecccccccchhhhccccchhhHHHHHHHhhCCCCCC
Q psy4525 186 HSLEKLSTSRIKSVNLVGRRGALQVAFTIKEFREMTKLPHVQTVFRNEQLCGVHEASATLARPRKRLTELILKTSNPDES 265 (388)
Q Consensus 186 ~~~~~~~~~~~~~V~~i~r~~~~~~~~~~~el~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 265 (388)
+. +++|+++.|++.....
T Consensus 218 -------~~-g~~V~li~~~~~~~~~------------------------------------------------------ 235 (464)
T 2xve_A 218 -------KY-GAKKLISCYRTAPMGY------------------------------------------------------ 235 (464)
T ss_dssp -------HT-TCSEEEEECSSCCCCC------------------------------------------------------
T ss_pred -------Hh-CCeEEEEEECCCCCCC------------------------------------------------------
Confidence 22 3579999988653110
Q ss_pred CCCCceeEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEecceEEEccccCCccC
Q psy4525 266 KSNCSKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPSGIAFRSIGYQSRCV 327 (388)
Q Consensus 266 ~~~~~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~p~~~ 327 (388)
....+|.++ ..++++.. + ++.+ .+|+++++|.||+|||++|+..
T Consensus 236 --~~~~~V~~~--~~V~~i~~---~---~V~~--------~dG~~i~~D~Vi~atG~~p~~~ 279 (464)
T 2xve_A 236 --KWPENWDER--PNLVRVDT---E---NAYF--------ADGSSEKVDAIILCTGYIHHFP 279 (464)
T ss_dssp --CCCTTEEEC--SCEEEECS---S---EEEE--------TTSCEEECSEEEECCCBCCCCT
T ss_pred --CCCCceEEc--CCeEEEeC---C---EEEE--------CCCCEEeCCEEEECCCCCCCCC
Confidence 002466665 56677752 2 2444 3445799999999999999863
No 52
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=99.91 E-value=4.5e-25 Score=220.40 Aligned_cols=240 Identities=14% Similarity=0.151 Sum_probs=153.9
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCC--------CCCCce-eeCCCCCCcc-------------------
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLP--------VPFGLV-RYGVAPDHPE------------------- 64 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~--------~~gg~~-~~g~~p~~~~------------------- 64 (388)
.+||+|||+||||+.||..+++ .|.+|+|||+.. .+||.| ++||.|....
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~--~G~kValIE~~~~~~~~~k~~lGGtCln~GCIPsK~L~~aa~~~~~~~~~~~~~Gi 119 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAA--HGARVLLFDYVKPSSQGTKWGIGGTCVNVGCVPKKLMHYAGHMGSIFKLDSKAYGW 119 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHT--TTCCEEEECCCCCCTTCCCCCSSHHHHHHSHHHHHHHHHHHHHHHHHHHTGGGGTE
T ss_pred CCCEEEECCCHHHHHHHHHHHH--CCCeEEEEeccccccccccCCCCCcccccchHHHHHHHHHHHHHHHHHhhhHhcCc
Confidence 4799999999999999999999 899999999643 478876 6677663210
Q ss_pred --------hhHH-----------HHHHHHhhcCCCcEEEceEEEEE---Eee--ec----c-cccccCEEEEeeCCCCCC
Q psy4525 65 --------VKNV-----------INTFTKTGDNPRVNFYGNICLGQ---DIS--LG----D-LTNAYHAVVLTYGADNDK 115 (388)
Q Consensus 65 --------~~~~-----------~~~~~~~~~~~~i~~~~~~~v~~---~~~--~~----~-~~~~yd~lvlAtG~~~~~ 115 (388)
...+ ...+...+++.+++++.+...-. .+. .. . ....++++|||||+.|.
T Consensus 120 ~~~~~~~d~~~~~~~~~~~v~~l~~~~~~~l~~~~V~~i~G~a~f~~~~~v~V~~~~~~~~~~~i~a~~iiIATGs~P~- 198 (542)
T 4b1b_A 120 KFDNLKHDWKKLVTTVQSHIRSLNFSYMTGLRSSKVKYINGLAKLKDKNTVSYYLKGDLSKEETVTGKYILIATGCRPH- 198 (542)
T ss_dssp EEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEEEETTEEEEEEC--CCCEEEEEEEEEEECCCEEEC-
T ss_pred ccCcccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeeEEEcCCCcceEeecccCCceEEEeeeeEEeccCCCCC-
Confidence 1111 11223345566787765443211 121 11 1 12378999999999984
Q ss_pred CCCCCCCCCCCeeecccccccccCCCCccccCcCCCCCeEEEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCC
Q psy4525 116 KLNIPGEDGKNIISARSFVGWYNGLPEDASLDLSLDCEEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSR 195 (388)
Q Consensus 116 ~~~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~ 195 (388)
.|+.++.+...++++.+++. ....+++++|||||++|+|+|..++ +.|
T Consensus 199 ~P~~~~~~~~~~~ts~~~l~------------l~~lP~~lvIIGgG~IGlE~A~~~~--------------------~lG 246 (542)
T 4b1b_A 199 IPDDVEGAKELSITSDDIFS------------LKKDPGKTLVVGASYVALECSGFLN--------------------SLG 246 (542)
T ss_dssp CCSSSBTHHHHCBCHHHHTT------------CSSCCCSEEEECCSHHHHHHHHHHH--------------------HHT
T ss_pred CCCcccCCCccccCchhhhc------------cccCCceEEEECCCHHHHHHHHHHH--------------------hcC
Confidence 55443333334555555552 2233689999999999999999876 233
Q ss_pred CcEEEEEeecCcccccCCHHHHHHHhcCCCceEEecccccccchhhhccccchhhHHHHHHHhhCCCCCCCCCCceeEEE
Q psy4525 196 IKSVNLVGRRGALQVAFTIKEFREMTKLPHVQTVFRNEQLCGVHEASATLARPRKRLTELILKTSNPDESKSNCSKYFRP 275 (388)
Q Consensus 196 ~~~V~~i~r~~~~~~~~~~~el~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 275 (388)
.+||++.|.. ....+ ++++. +.+.+.|. ++||.+
T Consensus 247 -~~VTii~~~~-~L~~~-D~ei~-------------------------------~~l~~~l~------------~~gi~~ 280 (542)
T 4b1b_A 247 -YDVTVAVRSI-VLRGF-DQQCA-------------------------------VKVKLYME------------EQGVMF 280 (542)
T ss_dssp -CCEEEEESSC-SSTTS-CHHHH-------------------------------HHHHHHHH------------HTTCEE
T ss_pred -CeEEEecccc-ccccc-chhHH-------------------------------HHHHHHHH------------hhccee
Confidence 4699998753 33332 22222 12222222 689999
Q ss_pred EecCcceeeeeCCCCceeEEEEccCccccCCceeEEecceEEEccccCCccCC-----CCCcccCCCccccCC
Q psy4525 276 IFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPSGIAFRSIGYQSRCVD-----SDIPFNEKSCTVIPK 343 (388)
Q Consensus 276 ~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~p~~~~-----~~l~~~~~~gi~l~~ 343 (388)
+++..+.++...+ +. ..+.+ .++.++.+|.|++|+|++||+.. .++.++..+++++++
T Consensus 281 ~~~~~v~~~~~~~-~~-~~v~~--------~~~~~~~~D~vLvAvGR~Pnt~~L~le~~gv~~~~~~~~i~vd 343 (542)
T 4b1b_A 281 KNGILPKKLTKMD-DK-ILVEF--------SDKTSELYDTVLYAIGRKGDIDGLNLESLNMNVNKSNNKIIAD 343 (542)
T ss_dssp EETCCEEEEEEET-TE-EEEEE--------TTSCEEEESEEEECSCEEESCGGGCGGGTTCCEETTTTEECCC
T ss_pred ecceEEEEEEecC-Ce-EEEEE--------cCCCeEEEEEEEEcccccCCccccCcccceeeecccCceEecc
Confidence 9999999998643 22 23332 34457889999999999999842 345666656654433
No 53
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=99.91 E-value=1.4e-24 Score=212.33 Aligned_cols=250 Identities=16% Similarity=0.176 Sum_probs=161.0
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCC--cEEEEcCCCCCC-Cce--eeCCCCCCcchhHHHHHHHHhhcCCCcEEEceE
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQS--TVDIYEKLPVPF-GLV--RYGVAPDHPEVKNVINTFTKTGDNPRVNFYGNI 87 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~--~v~lie~~~~~g-g~~--~~g~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~ 87 (388)
.++|+|||||+||+++|..|++ .|. +|++||+++... ... ...........+++.....+++++.+++++.++
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~--~g~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~ 81 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRA--SGWEGNIRLVGDATVIPHHLPPLSKAYLAGKATAESLYLRTPDAYAAQNIQLLGGT 81 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHH--TTCCSEEEEECSCCSCCBCSGGGGTTTTTTCSCSGGGBSSCHHHHHHTTEEEECSC
T ss_pred CCcEEEEcCHHHHHHHHHHHHc--cCcCCCEEEEECCCCCCCcCCCCcHHHhCCCCChHHhcccCHHHHHhCCCEEEeCC
Confidence 4799999999999999999999 676 799999986542 110 011101111111111111233455789988876
Q ss_pred EEE-E-----Eeeeccc-ccccCEEEEeeCCCCCCCCCCCCCCCCC---eeecccccccccCCCCccccCcCCCCCeEEE
Q psy4525 88 CLG-Q-----DISLGDL-TNAYHAVVLTYGADNDKKLNIPGEDGKN---IISARSFVGWYNGLPEDASLDLSLDCEEATI 157 (388)
Q Consensus 88 ~v~-~-----~~~~~~~-~~~yd~lvlAtG~~~~~~~~i~g~~~~~---v~~~~~~~~~~~~~~~~~~~~~~~~~~~vvV 157 (388)
.+. . .+.+.+. ...||+||+|||+.+ +.+++||.+.++ +++..+...... .. .....+++|+|
T Consensus 82 ~v~~i~~~~~~v~~~~g~~~~~d~lviAtG~~p-~~~~i~G~~~~~~~~v~~~~~~~d~~~----l~--~~l~~~~~vvV 154 (431)
T 1q1r_A 82 QVTAINRDRQQVILSDGRALDYDRLVLATGGRP-RPLPVASGAVGKANNFRYLRTLEDAEC----IR--RQLIADNRLVV 154 (431)
T ss_dssp CEEEEETTTTEEEETTSCEEECSEEEECCCEEE-CCCGGGTTHHHHSTTEEESSSHHHHHH----HH--HTCCTTCEEEE
T ss_pred EEEEEECCCCEEEECCCCEEECCEEEEcCCCCc-cCCCCCCcccCCCceEEEECCHHHHHH----HH--HHhhcCCeEEE
Confidence 542 1 2444444 348999999999987 577888876545 665443321100 00 11224789999
Q ss_pred EcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecCcccccCCHHHHHHHhcCCCceEEeccccccc
Q psy4525 158 LGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRGALQVAFTIKEFREMTKLPHVQTVFRNEQLCG 237 (388)
Q Consensus 158 IGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~~~~~~~~~~el~~l~~~~~~~~~~~~~~~~~ 237 (388)
||+|++|+|+|..|. +.+ .+|+++.+.+.+.....++++.
T Consensus 155 iGgG~~g~E~A~~l~--------------------~~G-~~Vtlv~~~~~~l~~~~~~~~~------------------- 194 (431)
T 1q1r_A 155 IGGGYIGLEVAATAI--------------------KAN-MHVTLLDTAARVLERVTAPPVS------------------- 194 (431)
T ss_dssp ECCSHHHHHHHHHHH--------------------HTT-CEEEEECSSSSTTTTTSCHHHH-------------------
T ss_pred ECCCHHHHHHHHHHH--------------------hCC-CEEEEEEeCCccccchhhHHHH-------------------
Confidence 999999999999876 233 4799999987654432222221
Q ss_pred chhhhccccchhhHHHHHHHhhCCCCCCCCCCceeEEEEecCcceeeeeC-CCCceeEEEEccCccccCCceeEEecceE
Q psy4525 238 VHEASATLARPRKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTEFKLN-DNGAITGINFANQQALVTEDTELIPSGIA 316 (388)
Q Consensus 238 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~-~~~~v~~v~~~~~~~~~~~~~~~l~~D~V 316 (388)
+.+.+.+. +.||++++++.++++..+ .++.+..+.+ .++++++||.|
T Consensus 195 ------------~~l~~~l~------------~~GV~i~~~~~v~~i~~~~~~~~v~~v~~--------~~G~~i~~D~V 242 (431)
T 1q1r_A 195 ------------AFYEHLHR------------EAGVDIRTGTQVCGFEMSTDQQKVTAVLC--------EDGTRLPADLV 242 (431)
T ss_dssp ------------HHHHHHHH------------HHTCEEECSCCEEEEEECTTTCCEEEEEE--------TTSCEEECSEE
T ss_pred ------------HHHHHHHH------------hCCeEEEeCCEEEEEEeccCCCcEEEEEe--------CCCCEEEcCEE
Confidence 11222222 579999999999999862 2356666654 34468999999
Q ss_pred EEccccCCccC---CCCCcccCCCccccCCCC
Q psy4525 317 FRSIGYQSRCV---DSDIPFNEKSCTVIPKEG 345 (388)
Q Consensus 317 i~a~G~~p~~~---~~~l~~~~~~gi~l~~~~ 345 (388)
|+|+|++|+.. ..+++++ +|+.+|+..
T Consensus 243 v~a~G~~p~~~l~~~~gl~~~--~gi~Vd~~~ 272 (431)
T 1q1r_A 243 IAGIGLIPNCELASAAGLQVD--NGIVINEHM 272 (431)
T ss_dssp EECCCEEECCHHHHHTTCCBS--SSEECCTTS
T ss_pred EECCCCCcCcchhhccCCCCC--CCEEECCCc
Confidence 99999999863 1456664 578887654
No 54
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.91 E-value=5.2e-25 Score=221.13 Aligned_cols=167 Identities=13% Similarity=0.223 Sum_probs=120.7
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCCCCC---------------------------Ccch
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPD---------------------------HPEV 65 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~~p~---------------------------~~~~ 65 (388)
.++|+|||||+||+++|..|++ .|.+|+|||+.+.+||.|.....|. +...
T Consensus 21 ~~dVvIIGaG~aGl~aA~~L~~--~G~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~~~~~~~~ 98 (549)
T 4ap3_A 21 SYDVVVVGAGIAGLYAIHRFRS--QGLTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSEKYATQ 98 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCSSSSCBH
T ss_pred CCCEEEECchHHHHHHHHHHHh--CCCCEEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCCccCCCCH
Confidence 4699999999999999999999 8999999999999999884221111 1234
Q ss_pred hHHHHHHHHhhcCCCc--EEEceEEEEE----------Eeeecccc-cccCEEEEeeC--CCCCCCCCCCCCC-CC-Cee
Q psy4525 66 KNVINTFTKTGDNPRV--NFYGNICLGQ----------DISLGDLT-NAYHAVVLTYG--ADNDKKLNIPGED-GK-NII 128 (388)
Q Consensus 66 ~~~~~~~~~~~~~~~i--~~~~~~~v~~----------~~~~~~~~-~~yd~lvlAtG--~~~~~~~~i~g~~-~~-~v~ 128 (388)
.++..++.+.++++++ ++++++.|.. .+++.++. ..||+||+||| +.+ +.|++||.+ .. .++
T Consensus 99 ~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~~s~p-~~p~ipG~~~f~g~~~ 177 (549)
T 4ap3_A 99 PEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGPLSNA-NTPAFDGLDRFTGDIV 177 (549)
T ss_dssp HHHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSEEEC-CCCCCTTGGGCCSEEE
T ss_pred HHHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcCCCCCC-CCCCCCCcccCCCceE
Confidence 5677777777777776 6776655532 23333333 47999999999 565 578899875 22 244
Q ss_pred ecccccccccCCCCccccCcCCCCCeEEEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecCcc
Q psy4525 129 SARSFVGWYNGLPEDASLDLSLDCEEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRGAL 208 (388)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~vvVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~~~ 208 (388)
+...+.. + .....+|+|+|||+|.+|+|+|..|+ ..+.+||++.|++.+
T Consensus 178 ~~~~~~~------~----~~~~~~krV~VIG~G~sgve~a~~l~---------------------~~~~~Vtv~~r~~~~ 226 (549)
T 4ap3_A 178 HTARWPH------D----GVDFTGKRVGVIGTGSSGIQSIPIIA---------------------EQAEQLFVFQRSANY 226 (549)
T ss_dssp EGGGCCT------T----CCCCBTCEEEEECCSHHHHHHHHHHH---------------------HHBSEEEEEESSCCC
T ss_pred Eeccccc------c----ccccCCCEEEEECCCchHHHHHHHHH---------------------hhCCEEEEEECCCCc
Confidence 4443320 0 22346899999999999999999886 223689999999987
Q ss_pred cccCC
Q psy4525 209 QVAFT 213 (388)
Q Consensus 209 ~~~~~ 213 (388)
..+..
T Consensus 227 ilp~~ 231 (549)
T 4ap3_A 227 SIPAG 231 (549)
T ss_dssp EEECC
T ss_pred cccCc
Confidence 66543
No 55
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=99.91 E-value=2.1e-24 Score=213.06 Aligned_cols=241 Identities=16% Similarity=0.193 Sum_probs=161.1
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCce-eeCCCCCC--------------------------cc-
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLV-RYGVAPDH--------------------------PE- 64 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~-~~g~~p~~--------------------------~~- 64 (388)
.+||+||||||+|+++|..|++ .|.+|+|||+ +.+||.| +.|+.|.. ..
T Consensus 5 ~~DVvVIGaG~aGl~aA~~la~--~G~~V~liEk-~~~GG~~~~~gcip~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~ 81 (463)
T 4dna_A 5 DYDLFVIGGGSGGVRSGRLAAA--LGKKVAIAEE-FRYGGTCVIRGCVPKKLYVYASQFAEHFEDAAGFGWTVGESRFDW 81 (463)
T ss_dssp SEEEEEECCSHHHHHHHHHHHT--TTCCEEEEES-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEECCCEECH
T ss_pred CCcEEEECcCHHHHHHHHHHHh--CCCEEEEEeC-CCCCCcccccCchhhHHHHHHHHHHHHHHHHHhcCcccCCCCcCH
Confidence 4799999999999999999999 8999999999 5788866 22332211 01
Q ss_pred ----------hhHHHHHHHHhhcCCCcEEEceEEEE---EEeee--cccccccCEEEEeeCCCCCC-CCCCCCCCCCCee
Q psy4525 65 ----------VKNVINTFTKTGDNPRVNFYGNICLG---QDISL--GDLTNAYHAVVLTYGADNDK-KLNIPGEDGKNII 128 (388)
Q Consensus 65 ----------~~~~~~~~~~~~~~~~i~~~~~~~v~---~~~~~--~~~~~~yd~lvlAtG~~~~~-~~~i~g~~~~~v~ 128 (388)
...+...+...+.+.+++++.+.... ..+.+ +.....||+||+|||+.+ . .|++||.+ .++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~v~~~~~~~~~~~d~lviAtG~~p-~~~p~i~G~~--~~~ 158 (463)
T 4dna_A 82 AKLVAAKEQEIARLEGLYRKGLANAGAEILDTRAELAGPNTVKLLASGKTVTAERIVIAVGGHP-SPHDALPGHE--LCI 158 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEESSSSEEEETTTTEEEEEEEEEECCCEEE-CCCTTSTTGG--GCB
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCCEEEEecCCeEEEeCEEEEecCCCc-ccCCCCCCcc--ccc
Confidence 11223334445556688887664332 12334 222348999999999987 4 66788765 344
Q ss_pred ecccccccccCCCCccccCcCCCCCeEEEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecCcc
Q psy4525 129 SARSFVGWYNGLPEDASLDLSLDCEEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRGAL 208 (388)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~vvVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~~~ 208 (388)
+..++.. ....+++++|||+|++|+|+|..|. +.+ .+|+++.|.+.+
T Consensus 159 ~~~~~~~------------~~~~~~~v~ViGgG~~g~e~A~~l~--------------------~~g-~~Vt~v~~~~~~ 205 (463)
T 4dna_A 159 TSNEAFD------------LPALPESILIAGGGYIAVEFANIFH--------------------GLG-VKTTLIYRGKEI 205 (463)
T ss_dssp CHHHHTT------------CSSCCSEEEEECCSHHHHHHHHHHH--------------------HTT-CEEEEECSSSSS
T ss_pred cHHHHhh------------hhcCCCeEEEECCCHHHHHHHHHHH--------------------HcC-CeEEEEEcCCcc
Confidence 4444331 1223789999999999999999876 233 479999998765
Q ss_pred cccCCHHHHHHHhcCCCceEEecccccccchhhhccccchhhHHHHHHHhhCCCCCCCCCCceeEEEEecCcceeeeeCC
Q psy4525 209 QVAFTIKEFREMTKLPHVQTVFRNEQLCGVHEASATLARPRKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTEFKLND 288 (388)
Q Consensus 209 ~~~~~~~el~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~ 288 (388)
...+. +++ .+.+.+.+. +.||++++++.++++..++
T Consensus 206 l~~~~-~~~-------------------------------~~~l~~~l~------------~~Gv~i~~~~~v~~i~~~~ 241 (463)
T 4dna_A 206 LSRFD-QDM-------------------------------RRGLHAAME------------EKGIRILCEDIIQSVSADA 241 (463)
T ss_dssp STTSC-HHH-------------------------------HHHHHHHHH------------HTTCEEECSCCEEEEEECT
T ss_pred ccccC-HHH-------------------------------HHHHHHHHH------------HCCCEEECCCEEEEEEEcC
Confidence 43322 121 122222222 5799999999999998754
Q ss_pred CCceeEEEEccCccccCCceeEEecceEEEccccCCccCC-----CCCcccCCCccccCCCC
Q psy4525 289 NGAITGINFANQQALVTEDTELIPSGIAFRSIGYQSRCVD-----SDIPFNEKSCTVIPKEG 345 (388)
Q Consensus 289 ~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~p~~~~-----~~l~~~~~~gi~l~~~~ 345 (388)
++. ..+.. +.+++ ++||.||+|+|++|++.. .++++++++.+.+|+..
T Consensus 242 ~~~-~~v~~-------~~~g~-i~aD~Vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~ 294 (463)
T 4dna_A 242 DGR-RVATT-------MKHGE-IVADQVMLALGRMPNTNGLGLEAAGVRTNELGAIIVDAFS 294 (463)
T ss_dssp TSC-EEEEE-------SSSCE-EEESEEEECSCEEESCTTSSTGGGTCCBCTTSCBCCCTTC
T ss_pred CCE-EEEEE-------cCCCe-EEeCEEEEeeCcccCCCCCCccccCceECCCCCEeECcCC
Confidence 443 23430 23455 999999999999999752 35667766667777654
No 56
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=99.91 E-value=3.3e-25 Score=217.04 Aligned_cols=244 Identities=16% Similarity=0.182 Sum_probs=153.5
Q ss_pred CcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCc---eee---CCCCCCcchhHHHHHHHHhhcCCCcEEEceE
Q psy4525 14 PNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGL---VRY---GVAPDHPEVKNVINTFTKTGDNPRVNFYGNI 87 (388)
Q Consensus 14 ~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~---~~~---g~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~ 87 (388)
++||||||||||++||..|++..+..+|+|||+++..++. +.+ +..... ...+.....+++++.+++++.++
T Consensus 1 PKVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~ 78 (437)
T 4eqs_A 1 PKIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANCALPYVIGEVVEDR--RYALAYTPEKFYDRKQITVKTYH 78 (437)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSSBCGGGHHHHHTTSSCCG--GGTBCCCHHHHHHHHCCEEEETE
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCcchhHHHHcCCccch--hhhhhcCHHHHHHhcCCEEEeCC
Confidence 4799999999999999999995455789999998764321 111 110110 00011111223445678887766
Q ss_pred EEEE-E-----eeecc------cccccCEEEEeeCCCCCCCCCCCCCCCCCeeecccccccccCCCCccccCcCCCCCeE
Q psy4525 88 CLGQ-D-----ISLGD------LTNAYHAVVLTYGADNDKKLNIPGEDGKNIISARSFVGWYNGLPEDASLDLSLDCEEA 155 (388)
Q Consensus 88 ~v~~-~-----~~~~~------~~~~yd~lvlAtG~~~~~~~~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~v 155 (388)
.+.. + ++... ....||+||||||+.+ +.|++||. +++..+.+.... .+........++++
T Consensus 79 ~V~~id~~~~~~~~~~~~~~~~~~~~yd~lVIATGs~p-~~p~i~g~---~~~~~~~~~~~~----~l~~~~~~~~~~~v 150 (437)
T 4eqs_A 79 EVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGASA-NSLGFESD---ITFTLRNLEDTD----AIDQFIKANQVDKV 150 (437)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEECSEEEECCCEEE-CCCCCCCT---TEECCSSHHHHH----HHHHHHHHHTCCEE
T ss_pred eEEEEEccCcEEEEEeccCCceEEEEcCEEEECCCCcc-ccccccCc---eEEeeccHHHHH----HHHHhhhccCCcEE
Confidence 5422 1 11111 1237999999999987 57777764 344333322110 00000011236899
Q ss_pred EEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecCcccccCCHHHHHHHhcCCCceEEeccccc
Q psy4525 156 TILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRGALQVAFTIKEFREMTKLPHVQTVFRNEQL 235 (388)
Q Consensus 156 vVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~~~~~~~~~~el~~l~~~~~~~~~~~~~~~ 235 (388)
+|||||++|+|+|..+. +.+ .+||+++|++.+...+.+
T Consensus 151 vViGgG~ig~E~A~~l~--------------------~~g-~~Vtlv~~~~~ll~~~d~--------------------- 188 (437)
T 4eqs_A 151 LVVGAGYVSLEVLENLY--------------------ERG-LHPTLIHRSDKINKLMDA--------------------- 188 (437)
T ss_dssp EEECCSHHHHHHHHHHH--------------------HHT-CEEEEEESSSCCSTTSCG---------------------
T ss_pred EEECCccchhhhHHHHH--------------------hcC-Ccceeeeeeccccccccc---------------------
Confidence 99999999999999776 123 579999999876433221
Q ss_pred ccchhhhccccchhhHHHHHHHhhCCCCCCCCCCceeEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEecce
Q psy4525 236 CGVHEASATLARPRKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPSGI 315 (388)
Q Consensus 236 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~ 315 (388)
...+.+.+.+. ++||+++++..++++.. . .+. ..++++++||.
T Consensus 189 -----------~~~~~~~~~l~------------~~gV~i~~~~~v~~~~~---~---~v~--------~~~g~~~~~D~ 231 (437)
T 4eqs_A 189 -----------DMNQPILDELD------------KREIPYRLNEEINAING---N---EIT--------FKSGKVEHYDM 231 (437)
T ss_dssp -----------GGGHHHHHHHH------------HTTCCEEESCCEEEEET---T---EEE--------ETTSCEEECSE
T ss_pred -----------hhHHHHHHHhh------------ccceEEEeccEEEEecC---C---eee--------ecCCeEEeeee
Confidence 11223333333 67999999999998863 1 122 34567899999
Q ss_pred EEEccccCCccC---CCCCcccCCCccccCCCCC
Q psy4525 316 AFRSIGYQSRCV---DSDIPFNEKSCTVIPKEGV 346 (388)
Q Consensus 316 Vi~a~G~~p~~~---~~~l~~~~~~gi~l~~~~~ 346 (388)
|++|+|++||+. ..++.++++++|.+|+...
T Consensus 232 vl~a~G~~Pn~~~~~~~gl~~~~~G~I~vd~~~~ 265 (437)
T 4eqs_A 232 IIEGVGTHPNSKFIESSNIKLDRKGFIPVNDKFE 265 (437)
T ss_dssp EEECCCEEESCGGGTTSSCCCCTTSCEECCTTCB
T ss_pred EEEEeceecCcHHHHhhhhhhccCCcEecCCCcc
Confidence 999999999974 2567788777788887654
No 57
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=99.91 E-value=1.9e-24 Score=214.85 Aligned_cols=250 Identities=13% Similarity=0.198 Sum_probs=161.3
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCC---CcEEEEcCCCCCCCceeeCCC---CCC-cchhHHHHHHHHhhcCCCcEEEc
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQ---STVDIYEKLPVPFGLVRYGVA---PDH-PEVKNVINTFTKTGDNPRVNFYG 85 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g---~~v~lie~~~~~gg~~~~g~~---p~~-~~~~~~~~~~~~~~~~~~i~~~~ 85 (388)
.++|+|||||+||+++|..|++ .+ .+|+|||+++.++.. .++.. ... ....++.....+.+++.+++++.
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~--~g~~~~~V~lie~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~ 111 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLT--NYGDANEIVVFDQNSNISFL-GAGMALWIGEQIAGPEGLFYSDKEELESLGAKVYM 111 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--HHGGGSEEEEECSSSCCSBC-GGGHHHHHTTSSSCSGGGBSCCHHHHHHTTCEEET
T ss_pred CCcEEEECCCHHHHHHHHHHHh--cCCCCCeEEEEECCCCCCcc-ccccchhhcCccCCHHHhhhcCHHHHHhCCCEEEe
Confidence 4899999999999999999999 55 999999998765421 11110 000 11111111122334456888876
Q ss_pred eEEEE-E-----Eeeec-c---cccccCEEEEeeCCCCCCCCCCCCCC-----------CCCeeecccccccccCCCCcc
Q psy4525 86 NICLG-Q-----DISLG-D---LTNAYHAVVLTYGADNDKKLNIPGED-----------GKNIISARSFVGWYNGLPEDA 144 (388)
Q Consensus 86 ~~~v~-~-----~~~~~-~---~~~~yd~lvlAtG~~~~~~~~i~g~~-----------~~~v~~~~~~~~~~~~~~~~~ 144 (388)
+..+. . .+.+. + ....||+||+|||+.+ +.|++||.+ .+++++...+..... ..
T Consensus 112 ~~~v~~i~~~~~~v~v~~~g~~~~~~~d~lviAtG~~p-~~p~i~G~~~~~~~~~f~~~~~~v~~~~~~~~~~~----~~ 186 (490)
T 2bc0_A 112 ESPVQSIDYDAKTVTALVDGKNHVETYDKLIFATGSQP-ILPPIKGAEIKEGSLEFEATLENLQFVKLYQNSAD----VI 186 (490)
T ss_dssp TCCEEEEETTTTEEEEEETTEEEEEECSEEEECCCEEE-CCCSCBTCCBCTTCTTCCBSSTTEEECSSHHHHHH----HH
T ss_pred CCEEEEEECCCCEEEEEeCCcEEEEECCEEEECCCCCc-CCCCCCCccccccccccccccCCEEEeCCHHHHHH----HH
Confidence 65442 1 23333 2 2348999999999987 577899877 567877655432100 00
Q ss_pred ccCcCCCCCeEEEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecCcccccCCHHHHHHHhcCC
Q psy4525 145 SLDLSLDCEEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRGALQVAFTIKEFREMTKLP 224 (388)
Q Consensus 145 ~~~~~~~~~~vvVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~~~~~~~~~~el~~l~~~~ 224 (388)
.......+++|+|||+|++|+|+|..|+ +.+ .+|+++.|.+.+.....++++.
T Consensus 187 ~~~~~~~~~~vvVIGgG~ig~E~A~~l~--------------------~~g-~~Vtlv~~~~~~l~~~~~~~~~------ 239 (490)
T 2bc0_A 187 AKLENKDIKRVAVVGAGYIGVELAEAFQ--------------------RKG-KEVVLIDVVDTCLAGYYDRDLT------ 239 (490)
T ss_dssp HHTTSTTCCEEEEECCSHHHHHHHHHHH--------------------HTT-CEEEEEESSSSTTTTTSCHHHH------
T ss_pred HHhhhcCCceEEEECCCHHHHHHHHHHH--------------------HCC-CeEEEEEcccchhhhHHHHHHH------
Confidence 0011135799999999999999999876 233 5799999998765422222222
Q ss_pred CceEEecccccccchhhhccccchhhHHHHHHHhhCCCCCCCCCCceeEEEEecCcceeeeeCCCCceeEEEEccCcccc
Q psy4525 225 HVQTVFRNEQLCGVHEASATLARPRKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTEFKLNDNGAITGINFANQQALV 304 (388)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~ 304 (388)
+.+.+.+. +.||++++++.++++.. ++.+..+.+
T Consensus 240 -------------------------~~l~~~l~------------~~GV~i~~~~~v~~i~~--~~~v~~v~~------- 273 (490)
T 2bc0_A 240 -------------------------DLMAKNME------------EHGIQLAFGETVKEVAG--NGKVEKIIT------- 273 (490)
T ss_dssp -------------------------HHHHHHHH------------TTTCEEEETCCEEEEEC--SSSCCEEEE-------
T ss_pred -------------------------HHHHHHHH------------hCCeEEEeCCEEEEEEc--CCcEEEEEE-------
Confidence 12222222 67999999999999985 345544432
Q ss_pred CCceeEEecceEEEccccCCccC--CCCCcccCCCccccCCCC
Q psy4525 305 TEDTELIPSGIAFRSIGYQSRCV--DSDIPFNEKSCTVIPKEG 345 (388)
Q Consensus 305 ~~~~~~l~~D~Vi~a~G~~p~~~--~~~l~~~~~~gi~l~~~~ 345 (388)
++++++||.||+|+|++||+. ...+++++++++.+|+..
T Consensus 274 --~g~~i~~D~Vi~a~G~~p~~~ll~~~l~~~~~G~I~Vd~~~ 314 (490)
T 2bc0_A 274 --DKNEYDVDMVILAVGFRPNTTLGNGKIDLFRNGAFLVNKRQ 314 (490)
T ss_dssp --SSCEEECSEEEECCCEEECCGGGTTCSCBCTTSCBCCCTTC
T ss_pred --CCcEEECCEEEECCCCCcChHHHHhhhccCCCCCEEECCCc
Confidence 235799999999999999974 222566655568887654
No 58
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.91 E-value=1.8e-23 Score=209.11 Aligned_cols=245 Identities=18% Similarity=0.223 Sum_probs=168.8
Q ss_pred CCCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceee--CCC--CC--CcchhHHHHHHHHhhcCCCcEEE
Q psy4525 11 QLKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRY--GVA--PD--HPEVKNVINTFTKTGDNPRVNFY 84 (388)
Q Consensus 11 ~~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~--g~~--p~--~~~~~~~~~~~~~~~~~~~i~~~ 84 (388)
...++|+||||||||+++|.+|++ .|.+|+++|+ .+||.|.. ++. +. +....++..++.+.+.+++++++
T Consensus 210 ~~~~dVvIIGgG~AGl~aA~~la~--~G~~v~lie~--~~GG~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~v~ 285 (521)
T 1hyu_A 210 RDAYDVLIVGSGPAGAAAAVYSAR--KGIRTGLMGE--RFGGQVLDTVDIENYISVPKTEGQKLAGALKAHVSDYDVDVI 285 (521)
T ss_dssp SCCEEEEEECCSHHHHHHHHHHHH--TTCCEEEECS--STTGGGTTCSCBCCBTTBSSBCHHHHHHHHHHHHHTSCEEEE
T ss_pred cCcccEEEECCcHHHHHHHHHHHh--CCCeEEEEEC--CCCCcccccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEE
Confidence 346899999999999999999999 8999999986 47777642 220 11 22456777888888888999999
Q ss_pred ceEEEE-E----------Eeeeccc-ccccCEEEEeeCCCCCCCCCCCCCCC---CCeeecccccccccCCCCccccCcC
Q psy4525 85 GNICLG-Q----------DISLGDL-TNAYHAVVLTYGADNDKKLNIPGEDG---KNIISARSFVGWYNGLPEDASLDLS 149 (388)
Q Consensus 85 ~~~~v~-~----------~~~~~~~-~~~yd~lvlAtG~~~~~~~~i~g~~~---~~v~~~~~~~~~~~~~~~~~~~~~~ 149 (388)
.++.+. . .+++.++ ...||+||+|||+.+ +.+++||.+. .+++... .+. ...
T Consensus 286 ~~~~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~~-~~~~ipG~~~~~~~~v~~~~----------~~~--~~~ 352 (521)
T 1hyu_A 286 DSQSASKLVPAATEGGLHQIETASGAVLKARSIIIATGAKW-RNMNVPGEDQYRTKGVTYCP----------HCD--GPL 352 (521)
T ss_dssp CSCCEEEEECCSSTTSCEEEEETTSCEEEEEEEEECCCEEE-CCCCCTTTTTTTTTTEECCT----------TCC--GGG
T ss_pred cCCEEEEEEeccCCCceEEEEECCCCEEEcCEEEECCCCCc-CCCCCCChhhhcCceEEEee----------cCc--hhh
Confidence 875442 1 1333333 347999999999987 5778888641 2222111 111 122
Q ss_pred CCCCeEEEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecCcccccCCHHHHHHHhcCCCceEE
Q psy4525 150 LDCEEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRGALQVAFTIKEFREMTKLPHVQTV 229 (388)
Q Consensus 150 ~~~~~vvVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~~~~~~~~~~el~~l~~~~~~~~~ 229 (388)
..+++|+|||+|++|+|+|..|+ ....+|+++.|.+.+... +
T Consensus 353 ~~~k~V~ViGgG~~g~E~A~~L~---------------------~~g~~Vtlv~~~~~l~~~---~-------------- 394 (521)
T 1hyu_A 353 FKGKRVAVIGGGNSGVEAAIDLA---------------------GIVEHVTLLEFAPEMKAD---Q-------------- 394 (521)
T ss_dssp GBTSEEEEECCSHHHHHHHHHHH---------------------HHBSEEEEECSSSSCCSC---H--------------
T ss_pred cCCCeEEEECCCHHHHHHHHHHH---------------------hhCCEEEEEEeCcccCcC---H--------------
Confidence 45799999999999999999886 123589999988764311 0
Q ss_pred ecccccccchhhhccccchhhHHHHHHHhhCCCCCCCCCCceeEEEEecCcceeeeeCCCCceeEEEEccCccccCCcee
Q psy4525 230 FRNEQLCGVHEASATLARPRKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTE 309 (388)
Q Consensus 230 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~ 309 (388)
.+...+. ...||++++++.++++..+ ++++.++.+.+. .+++..
T Consensus 395 ---------------------~l~~~l~-----------~~~gV~v~~~~~v~~i~~~-~~~v~~v~~~~~---~~g~~~ 438 (521)
T 1hyu_A 395 ---------------------VLQDKVR-----------SLKNVDIILNAQTTEVKGD-GSKVVGLEYRDR---VSGDIH 438 (521)
T ss_dssp ---------------------HHHHHHT-----------TCTTEEEECSEEEEEEEEC-SSSEEEEEEEET---TTCCEE
T ss_pred ---------------------HHHHHHh-----------cCCCcEEEeCCEEEEEEcC-CCcEEEEEEEeC---CCCceE
Confidence 0111111 1268999999999999864 367777777542 134456
Q ss_pred EEecceEEEccccCCccC--CCCCcccCCCccccCCCCC
Q psy4525 310 LIPSGIAFRSIGYQSRCV--DSDIPFNEKSCTVIPKEGV 346 (388)
Q Consensus 310 ~l~~D~Vi~a~G~~p~~~--~~~l~~~~~~gi~l~~~~~ 346 (388)
++++|.||+|+|++||+. ...+.+++++++.+|+...
T Consensus 439 ~i~~D~vi~a~G~~pn~~~l~~~l~~~~~G~I~Vd~~~~ 477 (521)
T 1hyu_A 439 SVALAGIFVQIGLLPNTHWLEGALERNRMGEIIIDAKCE 477 (521)
T ss_dssp EEECSEEEECCCEEESCGGGTTTSCBCTTSCBCCCTTCB
T ss_pred EEEcCEEEECcCCCCCchHHhhhhccCCCCcEEeCCCCC
Confidence 899999999999999872 2235666666677776543
No 59
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=99.91 E-value=3.6e-24 Score=210.78 Aligned_cols=250 Identities=18% Similarity=0.230 Sum_probs=163.6
Q ss_pred CcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCCC---CCC-c--chhHHHHHHHHhhcCCCcEEEceE
Q psy4525 14 PNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVA---PDH-P--EVKNVINTFTKTGDNPRVNFYGNI 87 (388)
Q Consensus 14 ~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~~---p~~-~--~~~~~~~~~~~~~~~~~i~~~~~~ 87 (388)
++|+|||||+||+++|..|++..++.+|+|||+++.++. +.++.. ... . ...++.....+.+++.+++++.+.
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~gv~~~~~~ 79 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISF-LSCGIALYLGKEIKNNDPRGLFYSSPEELSNLGANVQMRH 79 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCB-CGGGHHHHHTTCBGGGCGGGGBSCCHHHHHHTTCEEEESE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCc-ccccchhhhcCCcccCCHHHhhhcCHHHHHHcCCEEEeCC
Confidence 489999999999999999999545999999999876432 111110 000 0 122222222334455788887776
Q ss_pred EEEE------Eeeecc------cccccCEEEEeeCCCCCCCCCCCCCCCCCeeecccccccccCCCCccccCcCCCCCeE
Q psy4525 88 CLGQ------DISLGD------LTNAYHAVVLTYGADNDKKLNIPGEDGKNIISARSFVGWYNGLPEDASLDLSLDCEEA 155 (388)
Q Consensus 88 ~v~~------~~~~~~------~~~~yd~lvlAtG~~~~~~~~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~v 155 (388)
.+.. .+.+.+ ....||+||+|||+.+ +.+++||.+.+++++..++....... .....++++
T Consensus 80 ~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtGs~p-~~p~i~g~~~~~v~~~~~~~~~~~~~------~~~~~~~~v 152 (452)
T 2cdu_A 80 QVTNVDPETKTIKVKDLITNEEKTEAYDKLIMTTGSKP-TVPPIPGIDSSRVYLCKNYNDAKKLF------EEAPKAKTI 152 (452)
T ss_dssp EEEEEEGGGTEEEEEETTTCCEEEEECSEEEECCCEEE-CCCCCTTTTSTTEEECSSHHHHHHHH------HHGGGCSEE
T ss_pred EEEEEEcCCCEEEEEecCCCceEEEECCEEEEccCCCc-CCCCCCCCCCCCEEEeCcHHHHHHHH------HHhccCCeE
Confidence 5431 133321 2248999999999987 57789998777888766544211000 111247899
Q ss_pred EEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecCcccccCCHHHHHHHhcCCCceEEeccccc
Q psy4525 156 TILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRGALQVAFTIKEFREMTKLPHVQTVFRNEQL 235 (388)
Q Consensus 156 vVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~~~~~~~~~~el~~l~~~~~~~~~~~~~~~ 235 (388)
+|||+|++|+|+|..|. +. ..+|++++|.+.+.....++++.
T Consensus 153 vViGgG~~g~E~A~~l~--------------------~~-g~~Vtlv~~~~~~l~~~~~~~~~----------------- 194 (452)
T 2cdu_A 153 TIIGSGYIGAELAEAYS--------------------NQ-NYNVNLIDGHERVLYKYFDKEFT----------------- 194 (452)
T ss_dssp EEECCSHHHHHHHHHHH--------------------TT-TCEEEEEESSSSTTTTTSCHHHH-----------------
T ss_pred EEECcCHHHHHHHHHHH--------------------hc-CCEEEEEEcCCchhhhhhhhhHH-----------------
Confidence 99999999999999876 23 35799999988764422222221
Q ss_pred ccchhhhccccchhhHHHHHHHhhCCCCCCCCCCceeEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEecce
Q psy4525 236 CGVHEASATLARPRKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPSGI 315 (388)
Q Consensus 236 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~ 315 (388)
+.+.+.+. +.||++++++.++++..+ ++.+..+. + ++++++||.
T Consensus 195 --------------~~l~~~l~------------~~Gv~i~~~~~v~~i~~~-~~~v~~v~--------~-~g~~i~~D~ 238 (452)
T 2cdu_A 195 --------------DILAKDYE------------AHGVNLVLGSKVAAFEEV-DDEIITKT--------L-DGKEIKSDI 238 (452)
T ss_dssp --------------HHHHHHHH------------HTTCEEEESSCEEEEEEE-TTEEEEEE--------T-TSCEEEESE
T ss_pred --------------HHHHHHHH------------HCCCEEEcCCeeEEEEcC-CCeEEEEE--------e-CCCEEECCE
Confidence 12222222 579999999999999852 34554443 2 346899999
Q ss_pred EEEccccCCccC--CCCCcccCCCccccCCCC
Q psy4525 316 AFRSIGYQSRCV--DSDIPFNEKSCTVIPKEG 345 (388)
Q Consensus 316 Vi~a~G~~p~~~--~~~l~~~~~~gi~l~~~~ 345 (388)
||+|+|++||+. ...+.+++++++.+|+..
T Consensus 239 vv~a~G~~p~~~ll~~~l~~~~~G~i~Vd~~~ 270 (452)
T 2cdu_A 239 AILCIGFRPNTELLKGKVAMLDNGAIITDEYM 270 (452)
T ss_dssp EEECCCEEECCGGGTTTSCBCTTSCBCCCTTS
T ss_pred EEECcCCCCCHHHHHHhhhcCCCCCEEECCCc
Confidence 999999999974 222566666668887653
No 60
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.91 E-value=4.5e-24 Score=210.33 Aligned_cols=240 Identities=14% Similarity=0.176 Sum_probs=158.3
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCce-eeCCCCCC----------------------------
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLV-RYGVAPDH---------------------------- 62 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~-~~g~~p~~---------------------------- 62 (388)
..++|+||||||||+++|..|++ .|.+|+|||+ +.+||.| ++++.|..
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~--~g~~V~lie~-~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~~g~~~~~~ 80 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQ--LGIPTVLVEG-QALGGTCLNIGCIPSKALIHVAEQFHQASRFTEPSPLGISVASP 80 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHH--HTCCEEEECS-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHTTSCCTTCCCCCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHH--CCCEEEEEcc-CCCCCcCCCcCcHhHHHHHHHHHHHHHHhhcccccccCcccCCC
Confidence 34799999999999999999999 7999999999 5788876 33332210
Q ss_pred -cchhHHHH-----------HHHHhhcCCCcEEEceEEEEE---EeeecccccccCEEEEeeCCCCCCCCC-CCCCCCCC
Q psy4525 63 -PEVKNVIN-----------TFTKTGDNPRVNFYGNICLGQ---DISLGDLTNAYHAVVLTYGADNDKKLN-IPGEDGKN 126 (388)
Q Consensus 63 -~~~~~~~~-----------~~~~~~~~~~i~~~~~~~v~~---~~~~~~~~~~yd~lvlAtG~~~~~~~~-i~g~~~~~ 126 (388)
....++.. .+.+.+++.+++++.++.+.. .+++.+....||+||+|||+.+. .++ +|. +. +
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~~~~~~v~v~~~~~~~d~lviATGs~p~-~~~~~~~-~~-~ 157 (458)
T 1lvl_A 81 RLDIGQSVAWKDGIVDRLTTGVAALLKKHGVKVVHGWAKVLDGKQVEVDGQRIQCEHLLLATGSSSV-ELPMLPL-GG-P 157 (458)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSCEEEEETTEEEETTEEEECSEEEECCCEEEC-CBTTBCC-BT-T
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEEEEEEccCCEEEEeeEEEEeCEEEEeCCCCCC-CCCCCCc-cC-c
Confidence 01112211 233456678899887765432 24444433489999999999873 443 552 21 4
Q ss_pred eeecccccccccCCCCccccCcCCCCCeEEEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecC
Q psy4525 127 IISARSFVGWYNGLPEDASLDLSLDCEEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRG 206 (388)
Q Consensus 127 v~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~ 206 (388)
+++..++.. ....+++++|||+|++|+|+|..|. +.+ .+|+++.+.+
T Consensus 158 v~~~~~~~~------------~~~~~~~vvViGgG~~g~e~A~~l~--------------------~~g-~~Vtlv~~~~ 204 (458)
T 1lvl_A 158 VISSTEALA------------PKALPQHLVVVGGGYIGLELGIAYR--------------------KLG-AQVSVVEARE 204 (458)
T ss_dssp EECHHHHTC------------CSSCCSEEEEECCSHHHHHHHHHHH--------------------HHT-CEEEEECSSS
T ss_pred EecHHHHhh------------hhccCCeEEEECcCHHHHHHHHHHH--------------------HCC-CeEEEEEcCC
Confidence 655555431 1123689999999999999999776 223 4799999987
Q ss_pred cccccCCHHHHHHHhcCCCceEEecccccccchhhhccccchhhHHHHHHHhhCCCCCCCCCCceeEEEEecCcceeeee
Q psy4525 207 ALQVAFTIKEFREMTKLPHVQTVFRNEQLCGVHEASATLARPRKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTEFKL 286 (388)
Q Consensus 207 ~~~~~~~~~el~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~ 286 (388)
.+...+ ++++. +.+.+.+. +.||++++++.++++..
T Consensus 205 ~~l~~~-~~~~~-------------------------------~~l~~~l~------------~~gv~i~~~~~v~~i~~ 240 (458)
T 1lvl_A 205 RILPTY-DSELT-------------------------------APVAESLK------------KLGIALHLGHSVEGYEN 240 (458)
T ss_dssp SSSTTS-CHHHH-------------------------------HHHHHHHH------------HHTCEEETTCEEEEEET
T ss_pred cccccc-CHHHH-------------------------------HHHHHHHH------------HCCCEEEECCEEEEEEe
Confidence 764322 22221 12222222 57999999999999974
Q ss_pred CCCCceeEEEEccCccccCCceeEEecceEEEccccCCccCC-----CCCcccCCCccccCCCC
Q psy4525 287 NDNGAITGINFANQQALVTEDTELIPSGIAFRSIGYQSRCVD-----SDIPFNEKSCTVIPKEG 345 (388)
Q Consensus 287 ~~~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~p~~~~-----~~l~~~~~~gi~l~~~~ 345 (388)
+.+ .+.. ..++.+++++|.||+|+|++||... .+++++++ ++.+|+..
T Consensus 241 ---~~v-~v~~------~~G~~~~i~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~-~i~vd~~~ 293 (458)
T 1lvl_A 241 ---GCL-LAND------GKGGQLRLEADRVLVAVGRRPRTKGFNLECLDLKMNGA-AIAIDERC 293 (458)
T ss_dssp ---TEE-EEEC------SSSCCCEECCSCEEECCCEEECCSSSSGGGSCCCEETT-EECCCTTC
T ss_pred ---CCE-EEEE------CCCceEEEECCEEEECcCCCcCCCCCCcHhcCCcccCC-EEeECCCC
Confidence 222 2221 0233368999999999999999742 35666665 88887653
No 61
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=99.91 E-value=3.3e-24 Score=217.83 Aligned_cols=252 Identities=14% Similarity=0.169 Sum_probs=168.2
Q ss_pred CCCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCCC---CCC--cchhHHHHHHHHhhcCCCcEEEc
Q psy4525 11 QLKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVA---PDH--PEVKNVINTFTKTGDNPRVNFYG 85 (388)
Q Consensus 11 ~~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~~---p~~--~~~~~~~~~~~~~~~~~~i~~~~ 85 (388)
+.+++|+|||||+||++||..|++..++.+|+|||+++.++ ...++.. +.. .....+..++..+.++++++++.
T Consensus 34 ~~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~-~~~~~lp~~~~g~~~~~~~~~~~~~~~~~~~~gi~v~~ 112 (588)
T 3ics_A 34 WGSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYIS-FANCGLPYYIGGVITERQKLLVQTVERMSKRFNLDIRV 112 (588)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSS-BCGGGHHHHHTTSSCCGGGGBSSCHHHHHHHTTCEEEC
T ss_pred ccCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCcc-ccCCCCchhhcCcCCChHHhhccCHHHHHHhcCcEEEE
Confidence 45689999999999999999999955589999999998764 1111110 111 11122233344555567899888
Q ss_pred eEEEEE------Eeeec---cc---ccccCEEEEeeCCCCCCCCCCCCC-CCCCeeecccccccccCCCCccccCcCCCC
Q psy4525 86 NICLGQ------DISLG---DL---TNAYHAVVLTYGADNDKKLNIPGE-DGKNIISARSFVGWYNGLPEDASLDLSLDC 152 (388)
Q Consensus 86 ~~~v~~------~~~~~---~~---~~~yd~lvlAtG~~~~~~~~i~g~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (388)
++.+.. .+.+. +. ...||+||+|||+.+ +.+++||. +.+++++...+......... .....+
T Consensus 113 ~~~V~~id~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p-~~p~i~G~~~~~~v~~~~~~~~~~~~~~~----l~~~~~ 187 (588)
T 3ics_A 113 LSEVVKINKEEKTITIKNVTTNETYNEAYDVLILSPGAKP-IVPSIPGIEEAKALFTLRNVPDTDRIKAY----IDEKKP 187 (588)
T ss_dssp SEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEE-CCCCCTTTTTCTTEEECSSHHHHHHHHHH----HHHHCC
T ss_pred CCEEEEEECCCCEEEEeecCCCCEEEEeCCEEEECCCCCC-CCCCCCCcccCCCeEEeCCHHHHHHHHHH----HhhcCC
Confidence 776632 12221 12 237999999999987 57789998 77788877765422100000 001247
Q ss_pred CeEEEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecCcccccCCHHHHHHHhcCCCceEEecc
Q psy4525 153 EEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRGALQVAFTIKEFREMTKLPHVQTVFRN 232 (388)
Q Consensus 153 ~~vvVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~~~~~~~~~~el~~l~~~~~~~~~~~~ 232 (388)
++++|||+|++|+|+|..|. +.+ .+|+++.|.+.+...+.. ++
T Consensus 188 ~~vvViGgG~~g~e~A~~l~--------------------~~g-~~Vtlv~~~~~~l~~~~~-~~--------------- 230 (588)
T 3ics_A 188 RHATVIGGGFIGVEMVENLR--------------------ERG-IEVTLVEMANQVMPPIDY-EM--------------- 230 (588)
T ss_dssp SEEEEECCSHHHHHHHHHHH--------------------HTT-CEEEEECSSSSSCTTSCH-HH---------------
T ss_pred CeEEEECCCHHHHHHHHHHH--------------------hCC-CeEEEEecCCcccccCCH-HH---------------
Confidence 89999999999999999876 233 579999998866544221 11
Q ss_pred cccccchhhhccccchhhHHHHHHHhhCCCCCCCCCCceeEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEe
Q psy4525 233 EQLCGVHEASATLARPRKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIP 312 (388)
Q Consensus 233 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~ 312 (388)
.+.+.+.+. +.||++++++.++++..++ + .+.+ .++++++
T Consensus 231 ----------------~~~l~~~l~------------~~GV~i~~~~~v~~i~~~~-~---~v~~--------~~g~~i~ 270 (588)
T 3ics_A 231 ----------------AAYVHEHMK------------NHDVELVFEDGVDALEENG-A---VVRL--------KSGSVIQ 270 (588)
T ss_dssp ----------------HHHHHHHHH------------HTTCEEECSCCEEEEEGGG-T---EEEE--------TTSCEEE
T ss_pred ----------------HHHHHHHHH------------HcCCEEEECCeEEEEecCC-C---EEEE--------CCCCEEE
Confidence 112222222 5799999999999997532 2 2333 3456899
Q ss_pred cceEEEccccCCccC---CCCCcccCCCccccCCCC
Q psy4525 313 SGIAFRSIGYQSRCV---DSDIPFNEKSCTVIPKEG 345 (388)
Q Consensus 313 ~D~Vi~a~G~~p~~~---~~~l~~~~~~gi~l~~~~ 345 (388)
||.||+|+|++|++. ..++++++++++.+|+..
T Consensus 271 ~D~Vi~a~G~~p~~~~l~~~g~~~~~~g~i~vd~~~ 306 (588)
T 3ics_A 271 TDMLILAIGVQPESSLAKGAGLALGVRGTIKVNEKF 306 (588)
T ss_dssp CSEEEECSCEEECCHHHHHTTCCBCGGGCBCCCTTS
T ss_pred cCEEEEccCCCCChHHHHhcCceEcCCCCEEECCcc
Confidence 999999999999973 256777777778887653
No 62
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=99.91 E-value=6e-24 Score=210.93 Aligned_cols=241 Identities=16% Similarity=0.218 Sum_probs=160.8
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCce-eeCCCCCC--------------------------cc-
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLV-RYGVAPDH--------------------------PE- 64 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~-~~g~~p~~--------------------------~~- 64 (388)
.+||+||||||+|+++|..|++ .|.+|+|||+ +.+||.| +.||.|.. ..
T Consensus 26 ~~DVvVIGgG~aGl~aA~~la~--~G~~V~liEk-~~~GG~~~~~gcip~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~ 102 (484)
T 3o0h_A 26 DFDLFVIGSGSGGVRAARLAGA--LGKRVAIAEE-YRIGGTCVIRGCVPKKLYFYASQYAQEFSKSIGFGWKYADPIFNW 102 (484)
T ss_dssp SEEEEEECCSHHHHHHHHHHHH--TTCCEEEEES-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHGGGTBCCCCCEECH
T ss_pred CCCEEEECcCHHHHHHHHHHHh--CcCEEEEEeC-CCCCCceeccCccccHHHHHHHHHHHHHHHHHhCCcccCCCccCH
Confidence 4799999999999999999999 8999999999 5788876 33332211 00
Q ss_pred ----------hhHHHHHHHHhhcCCCcEEEceEEEEE---Eeee--cccccccCEEEEeeCCCCCCCCCCCCCCCCCeee
Q psy4525 65 ----------VKNVINTFTKTGDNPRVNFYGNICLGQ---DISL--GDLTNAYHAVVLTYGADNDKKLNIPGEDGKNIIS 129 (388)
Q Consensus 65 ----------~~~~~~~~~~~~~~~~i~~~~~~~v~~---~~~~--~~~~~~yd~lvlAtG~~~~~~~~i~g~~~~~v~~ 129 (388)
...+...+...+.+.+++++.+..... .+.+ +.....||+||+|||+.+.+.+++||.+ .+++
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~i~~~~v~v~~~~~~~~~d~lviAtG~~p~~~p~i~G~~--~~~~ 180 (484)
T 3o0h_A 103 EKLVAAKNKEISRLEGLYREGLQNSNVHIYESRAVFVDEHTLELSVTGERISAEKILIATGAKIVSNSAIKGSD--LCLT 180 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEETTEEEETTTCCEEEEEEEEECCCEEECCC--CBTGG--GSBC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeCCEEEEecCCeEEEeCEEEEccCCCcccCCCCCCcc--cccc
Confidence 112333445556667888876643322 2334 2233489999999999873266788754 2343
Q ss_pred cccccccccCCCCccccCcCCCCCeEEEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecCccc
Q psy4525 130 ARSFVGWYNGLPEDASLDLSLDCEEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRGALQ 209 (388)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~vvVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~~~~ 209 (388)
..++.. ....+++++|||+|++|+|+|..|. +.+ .+|+++.|.+.+.
T Consensus 181 ~~~~~~------------~~~~~~~v~ViGgG~~g~e~A~~l~--------------------~~g-~~Vtli~~~~~~l 227 (484)
T 3o0h_A 181 SNEIFD------------LEKLPKSIVIVGGGYIGVEFANIFH--------------------GLG-VKTTLLHRGDLIL 227 (484)
T ss_dssp TTTGGG------------CSSCCSEEEEECCSHHHHHHHHHHH--------------------HTT-CEEEEECSSSSSS
T ss_pred HHHHHh------------HHhcCCcEEEECcCHHHHHHHHHHH--------------------HcC-CeEEEEECCCccc
Confidence 333331 1223789999999999999999775 233 4799999987654
Q ss_pred ccCCHHHHHHHhcCCCceEEecccccccchhhhccccchhhHHHHHHHhhCCCCCCCCCCceeEEEEecCcceeeeeCCC
Q psy4525 210 VAFTIKEFREMTKLPHVQTVFRNEQLCGVHEASATLARPRKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTEFKLNDN 289 (388)
Q Consensus 210 ~~~~~~el~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~ 289 (388)
..+.+ ++ .+.+.+.+. +.||++++++.++++..++
T Consensus 228 ~~~~~-~~-------------------------------~~~l~~~l~------------~~Gv~i~~~~~V~~i~~~~- 262 (484)
T 3o0h_A 228 RNFDY-DL-------------------------------RQLLNDAMV------------AKGISIIYEATVSQVQSTE- 262 (484)
T ss_dssp TTSCH-HH-------------------------------HHHHHHHHH------------HHTCEEESSCCEEEEEECS-
T ss_pred cccCH-HH-------------------------------HHHHHHHHH------------HCCCEEEeCCEEEEEEeeC-
Confidence 33221 11 112222222 5799999999999998754
Q ss_pred CceeEEEEccCccccCCceeEEecceEEEccccCCccCC-----CCCcccCCCccccCCCC
Q psy4525 290 GAITGINFANQQALVTEDTELIPSGIAFRSIGYQSRCVD-----SDIPFNEKSCTVIPKEG 345 (388)
Q Consensus 290 ~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~p~~~~-----~~l~~~~~~gi~l~~~~ 345 (388)
+.+ .+.+ .++++++||.||+|+|++|+... .++++++++++.+|+..
T Consensus 263 ~~v-~v~~--------~~g~~i~aD~Vi~A~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~ 314 (484)
T 3o0h_A 263 NCY-NVVL--------TNGQTICADRVMLATGRVPNTTGLGLERAGVKVNEFGAVVVDEKM 314 (484)
T ss_dssp SSE-EEEE--------TTSCEEEESEEEECCCEEECCTTCCHHHHTCCBCTTSCBCCCTTS
T ss_pred CEE-EEEE--------CCCcEEEcCEEEEeeCCCcCCCCCChhhcCceECCCCCEeECCCC
Confidence 333 4443 34468999999999999999852 35667766667777654
No 63
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=99.91 E-value=4e-24 Score=212.49 Aligned_cols=242 Identities=13% Similarity=0.185 Sum_probs=153.6
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCce-eeCCCCCC--------------------------cch
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLV-RYGVAPDH--------------------------PEV 65 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~-~~g~~p~~--------------------------~~~ 65 (388)
.+||+||||||||+++|..|++ .|.+|+|||+++ +||.| ++||.|.. ...
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~--~G~~V~liE~~~-~GGtc~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~~~~~~~~ 84 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKK--HTDKVVLIEGGA-YGTTCARVGCMPSKLLIAAADASYHASQTDLFGIQVDRISVNG 84 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHT--TCSCEEEEESSC-SSCHHHHHSHHHHHHHHHHHHHHHHHTCGGGGTEECSEEEECH
T ss_pred CCCEEEECCCHHHHHHHHHHHh--CCCcEEEEeCCC-CCCcccccChhcCHHHHHHHHHHHHHhhhhhcCcCCCCCccCH
Confidence 3799999999999999999999 899999999974 78876 33333211 112
Q ss_pred hHHHHHHHH-----------hhcC-CCcEEEceE-EEE--EEeeeccc-ccccCEEEEeeCCCCCCCCCCCCCCCCCeee
Q psy4525 66 KNVINTFTK-----------TGDN-PRVNFYGNI-CLG--QDISLGDL-TNAYHAVVLTYGADNDKKLNIPGEDGKNIIS 129 (388)
Q Consensus 66 ~~~~~~~~~-----------~~~~-~~i~~~~~~-~v~--~~~~~~~~-~~~yd~lvlAtG~~~~~~~~i~g~~~~~v~~ 129 (388)
.++..++.+ .+.. .+++++.+. .+. ..+.+.+. ...||+||||||+.+ +.|++++...+++++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~a~~~~~~~v~~~~~~~~~~d~lViATGs~p-~~p~~~~~~~~~v~t 163 (492)
T 3ic9_A 85 KAVMKRIQTERDRFVGFVVESVESFDEQDKIRGFAKFLDEHTLQVDDHSQVIAKRIVIATGSRP-NYPEFLAAAGSRLLT 163 (492)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCGGGEEESCEEEEETTEEEETTTEEEEEEEEEECCCEEC-CCCHHHHTTGGGEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCeeEEEEEEEEecCCEEEEcCCcEEEeCEEEEccCCCC-cCCCCCCccCCcEEc
Confidence 222222211 1111 123232221 111 12444333 348999999999987 466655544556776
Q ss_pred cccccccccCCCCccccCcCCCCCeEEEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecCccc
Q psy4525 130 ARSFVGWYNGLPEDASLDLSLDCEEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRGALQ 209 (388)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~vvVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~~~~ 209 (388)
+.++.. ....+++++|||+|++|+|+|..|. +.+ .+|+++.|.+.+.
T Consensus 164 ~~~~~~------------~~~~~k~vvViGgG~ig~E~A~~l~--------------------~~g-~~Vtlv~~~~~~l 210 (492)
T 3ic9_A 164 NDNLFE------------LNDLPKSVAVFGPGVIGLELGQALS--------------------RLG-VIVKVFGRSGSVA 210 (492)
T ss_dssp HHHHTT------------CSSCCSEEEEESSCHHHHHHHHHHH--------------------HTT-CEEEEECCTTCCT
T ss_pred HHHHhh------------hhhcCCeEEEECCCHHHHHHHHHHH--------------------HcC-CeEEEEEECCccc
Confidence 666552 1223799999999999999999886 233 5799999998764
Q ss_pred ccCCHHHHHHHhcCCCceEEecccccccchhhhccccchhhHHHHHHHhhCCCCCCCCCCceeEEEEecCcceeeeeCCC
Q psy4525 210 VAFTIKEFREMTKLPHVQTVFRNEQLCGVHEASATLARPRKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTEFKLNDN 289 (388)
Q Consensus 210 ~~~~~~el~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~ 289 (388)
..+. +++. +.+.+.+. +. |++++++.++++..++
T Consensus 211 ~~~d-~~~~-------------------------------~~l~~~l~------------~~-V~i~~~~~v~~i~~~~- 244 (492)
T 3ic9_A 211 NLQD-EEMK-------------------------------RYAEKTFN------------EE-FYFDAKARVISTIEKE- 244 (492)
T ss_dssp TCCC-HHHH-------------------------------HHHHHHHH------------TT-SEEETTCEEEEEEECS-
T ss_pred ccCC-HHHH-------------------------------HHHHHHHh------------hC-cEEEECCEEEEEEEcC-
Confidence 3322 2221 12222222 34 9999999999998754
Q ss_pred CceeEEEEccCccccCCceeEEecceEEEccccCCccCC-----CCCcccCCCccccC
Q psy4525 290 GAITGINFANQQALVTEDTELIPSGIAFRSIGYQSRCVD-----SDIPFNEKSCTVIP 342 (388)
Q Consensus 290 ~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~p~~~~-----~~l~~~~~~gi~l~ 342 (388)
+.+. +.+.+ ..++.++++||.||+|+|++||+.. .++++++++.+.+|
T Consensus 245 ~~v~-v~~~~----~~G~~~~i~~D~Vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd 297 (492)
T 3ic9_A 245 DAVE-VIYFD----KSGQKTTESFQYVLAATGRKANVDKLGLENTSIELDKKNSPLFD 297 (492)
T ss_dssp SSEE-EEEEC----TTCCEEEEEESEEEECSCCEESCSSSCGGGSCCCBCTTCCBCCC
T ss_pred CEEE-EEEEe----CCCceEEEECCEEEEeeCCccCCCCCChhhcCCEECCCCCEeEC
Confidence 3332 43321 0233368999999999999999742 35666665556666
No 64
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=99.91 E-value=2e-24 Score=214.30 Aligned_cols=245 Identities=14% Similarity=0.193 Sum_probs=159.5
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCce-eeCCCCCC--------------------------cch
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLV-RYGVAPDH--------------------------PEV 65 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~-~~g~~p~~--------------------------~~~ 65 (388)
.++|+||||||||+++|..|++ .|.+|+|||+.+.+||.| +.++.|.. ...
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~--~G~~V~liE~~~~~GG~~~~~g~~psk~ll~~~~~~~~~~~~~~~gi~~~~~~~~~ 83 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAAD--EGLKVAIVERYKTLGGVCLNVGCIPSKALLHNAAVIDEVRHLAANGIKYPEPELDI 83 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH--TTCCEEEEESSSCSSHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCCCCCH
T ss_pred cCCEEEECCCHHHHHHHHHHHh--CCCeEEEEeCCCCCCCceeeecccchHHHHHHHHHHHHHHHHHhCCcccCCCccCH
Confidence 4799999999999999999999 899999999988888765 22322210 011
Q ss_pred hHH-----------HHHHHHhhcCCCcEEEceEEEEE---Eeee--cc-------------cccccCEEEEeeCCCCCCC
Q psy4525 66 KNV-----------INTFTKTGDNPRVNFYGNICLGQ---DISL--GD-------------LTNAYHAVVLTYGADNDKK 116 (388)
Q Consensus 66 ~~~-----------~~~~~~~~~~~~i~~~~~~~v~~---~~~~--~~-------------~~~~yd~lvlAtG~~~~~~ 116 (388)
..+ ...+...+++.+++++.++.+.. .+.+ .+ ....||+||+|||+.+. .
T Consensus 84 ~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~v~v~~~~g~~~~~~~~~g~~~~i~ad~lViAtGs~p~-~ 162 (482)
T 1ojt_A 84 DMLRAYKDGVVSRLTGGLAGMAKSRKVDVIQGDGQFLDPHHLEVSLTAGDAYEQAAPTGEKKIVAFKNCIIAAGSRVT-K 162 (482)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEEEETTEEEEEEEEEEETTEEEEEEEEEEEEEEEEEECCCEEEC-C
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCcEEEeeEEEEccCCEEEEEecCCcccccccccCcceEEEcCEEEECCCCCCC-C
Confidence 111 11233455667898887765421 1222 11 23479999999999874 4
Q ss_pred CC-CCCCCCCCeeecccccccccCCCCccccCcCCCCCeEEEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCC
Q psy4525 117 LN-IPGEDGKNIISARSFVGWYNGLPEDASLDLSLDCEEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSR 195 (388)
Q Consensus 117 ~~-i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~ 195 (388)
++ ++. + .++++..++.. ....+++++|||+|++|+|+|..|. +.+
T Consensus 163 ~~~i~~-~-~~v~~~~~~~~------------~~~~~~~vvViGgG~ig~E~A~~l~--------------------~~G 208 (482)
T 1ojt_A 163 LPFIPE-D-PRIIDSSGALA------------LKEVPGKLLIIGGGIIGLEMGTVYS--------------------TLG 208 (482)
T ss_dssp CSSCCC-C-TTEECHHHHTT------------CCCCCSEEEEESCSHHHHHHHHHHH--------------------HHT
T ss_pred CCCCCc-c-CcEEcHHHHhc------------ccccCCeEEEECCCHHHHHHHHHHH--------------------HcC
Confidence 44 552 2 25665555441 1123789999999999999999876 123
Q ss_pred CcEEEEEeecCcccccCCHHHHHHHhcCCCceEEecccccccchhhhccccchhhHHHHHHHhhCCCCCCCCCCceeEEE
Q psy4525 196 IKSVNLVGRRGALQVAFTIKEFREMTKLPHVQTVFRNEQLCGVHEASATLARPRKRLTELILKTSNPDESKSNCSKYFRP 275 (388)
Q Consensus 196 ~~~V~~i~r~~~~~~~~~~~el~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 275 (388)
.+|+++.|.+.+...+. +++. +.+.+.+ .+.||++
T Consensus 209 -~~Vtlv~~~~~~l~~~~-~~~~-------------------------------~~l~~~l------------~~~gV~i 243 (482)
T 1ojt_A 209 -SRLDVVEMMDGLMQGAD-RDLV-------------------------------KVWQKQN------------EYRFDNI 243 (482)
T ss_dssp -CEEEEECSSSSSSTTSC-HHHH-------------------------------HHHHHHH------------GGGEEEE
T ss_pred -CeEEEEEECCccccccC-HHHH-------------------------------HHHHHHH------------HhcCCEE
Confidence 47999999987644322 1211 1222222 2689999
Q ss_pred EecCcceeeeeCCCCceeEEEEccCccccCCceeEEecceEEEccccCCccCC-----CCCcccCCCccccCCCC
Q psy4525 276 IFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPSGIAFRSIGYQSRCVD-----SDIPFNEKSCTVIPKEG 345 (388)
Q Consensus 276 ~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~p~~~~-----~~l~~~~~~gi~l~~~~ 345 (388)
++++.++++..++ ....+.+.+. .+.+++++||.||+|+|++||+.. .++++++++.+.+|+..
T Consensus 244 ~~~~~v~~i~~~~--~~~~v~~~~~----~~~g~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~~ 312 (482)
T 1ojt_A 244 MVNTKTVAVEPKE--DGVYVTFEGA----NAPKEPQRYDAVLVAAGRAPNGKLISAEKAGVAVTDRGFIEVDKQM 312 (482)
T ss_dssp ECSCEEEEEEEET--TEEEEEEESS----SCCSSCEEESCEEECCCEEECGGGTTGGGTTCCCCTTSCCCCCTTS
T ss_pred EECCEEEEEEEcC--CeEEEEEecc----CCCceEEEcCEEEECcCCCcCCCCCChhhcCceeCCCCCEeeCCCc
Confidence 9999999998643 2234444220 112457899999999999999721 45666655558887653
No 65
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=99.91 E-value=3.5e-24 Score=206.40 Aligned_cols=246 Identities=13% Similarity=0.171 Sum_probs=162.6
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCC--CcEEEEcCCCCCCCceee----CCCCCCcchhHHHH-HHHHhhcCCCcEEEc
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQ--STVDIYEKLPVPFGLVRY----GVAPDHPEVKNVIN-TFTKTGDNPRVNFYG 85 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g--~~v~lie~~~~~gg~~~~----g~~p~~~~~~~~~~-~~~~~~~~~~i~~~~ 85 (388)
.++|+|||||+||+++|..|++ .| .+|+++|+++ |..+.. ...+......++.. ....++++.+++++.
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~--~g~~~~V~lie~~~--g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 79 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRK--LDGETPLLMITADD--GRSYSKPMLSTGFSKNKDADGLAMAEPGAMAEQLNARILT 79 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHT--TCSSSCEEEECSSC--CCEECGGGGGGTTTTTCCHHHHEEECHHHHHHHTTCEEEC
T ss_pred CCcEEEECChHHHHHHHHHHHh--hCCCCCEEEEECCC--CCccCcccccHHHhCCCCHHHhhccCHHHHHHhCCcEEEe
Confidence 4799999999999999999999 66 6799999874 322211 11122222333322 234445567888886
Q ss_pred eEEEE------EEeeecccccccCEEEEeeCCCCCCCCCCCCCCCCCeeecccccccccCCCCccccCcCCCCCeEEEEc
Q psy4525 86 NICLG------QDISLGDLTNAYHAVVLTYGADNDKKLNIPGEDGKNIISARSFVGWYNGLPEDASLDLSLDCEEATILG 159 (388)
Q Consensus 86 ~~~v~------~~~~~~~~~~~yd~lvlAtG~~~~~~~~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVIG 159 (388)
+..+. ..+.+.+....||+||+|||+.+ +.|++||.+.+++++..++..... +. .....+++++|||
T Consensus 80 ~~~v~~i~~~~~~v~~~~~~~~~d~lviAtG~~p-~~p~i~g~~~~~v~~~~~~~~~~~----~~--~~~~~~~~v~ViG 152 (384)
T 2v3a_A 80 HTRVTGIDPGHQRIWIGEEEVRYRDLVLAWGAEP-IRVPVEGDAQDALYPINDLEDYAR----FR--QAAAGKRRVLLLG 152 (384)
T ss_dssp SCCCCEEEGGGTEEEETTEEEECSEEEECCCEEE-CCCCCBSTTTTCEEECSSHHHHHH----HH--HHHTTCCEEEEEC
T ss_pred CCEEEEEECCCCEEEECCcEEECCEEEEeCCCCc-CCCCCCCcCcCCEEEECCHHHHHH----HH--HhhccCCeEEEEC
Confidence 65432 12444444458999999999988 577899887678888777653211 00 1112379999999
Q ss_pred CChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecCcccccCCHHHHHHHhcCCCceEEecccccccch
Q psy4525 160 QGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRGALQVAFTIKEFREMTKLPHVQTVFRNEQLCGVH 239 (388)
Q Consensus 160 gG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~~~~~~~~~~el~~l~~~~~~~~~~~~~~~~~~~ 239 (388)
+|.+|+|+|..|. +.+ .+|+++.+.+.+...+.++++.
T Consensus 153 gG~~g~e~A~~l~--------------------~~g-~~Vtlv~~~~~~~~~~~~~~~~--------------------- 190 (384)
T 2v3a_A 153 AGLIGCEFANDLS--------------------SGG-YQLDVVAPCEQVMPGLLHPAAA--------------------- 190 (384)
T ss_dssp CSHHHHHHHHHHH--------------------HTT-CEEEEEESSSSSSTTTSCHHHH---------------------
T ss_pred CCHHHHHHHHHHH--------------------hCC-CeEEEEecCcchhhcccCHHHH---------------------
Confidence 9999999999876 233 4799999987654432222221
Q ss_pred hhhccccchhhHHHHHHHhhCCCCCCCCCCceeEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEecceEEEc
Q psy4525 240 EASATLARPRKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPSGIAFRS 319 (388)
Q Consensus 240 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a 319 (388)
+.+.+.+. +.|+++++++.++++..++ + ...+.+ .++++++||.||+|
T Consensus 191 ----------~~l~~~l~------------~~gv~i~~~~~v~~i~~~~-~-~~~v~~--------~~g~~i~~d~vv~a 238 (384)
T 2v3a_A 191 ----------KAVQAGLE------------GLGVRFHLGPVLASLKKAG-E-GLEAHL--------SDGEVIPCDLVVSA 238 (384)
T ss_dssp ----------HHHHHHHH------------TTTCEEEESCCEEEEEEET-T-EEEEEE--------TTSCEEEESEEEEC
T ss_pred ----------HHHHHHHH------------HcCCEEEeCCEEEEEEecC-C-EEEEEE--------CCCCEEECCEEEEC
Confidence 12222222 5799999999999998643 2 233433 34568999999999
Q ss_pred cccCCcc-C--CCCCcccCCCccccCCCC
Q psy4525 320 IGYQSRC-V--DSDIPFNEKSCTVIPKEG 345 (388)
Q Consensus 320 ~G~~p~~-~--~~~l~~~~~~gi~l~~~~ 345 (388)
+|++|+. + ..+++++ +|+.+|++.
T Consensus 239 ~G~~p~~~l~~~~g~~~~--~gi~vd~~~ 265 (384)
T 2v3a_A 239 VGLRPRTELAFAAGLAVN--RGIVVDRSL 265 (384)
T ss_dssp SCEEECCHHHHHTTCCBS--SSEEECTTC
T ss_pred cCCCcCHHHHHHCCCCCC--CCEEECCCC
Confidence 9999997 2 2466665 368877653
No 66
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=99.91 E-value=1.4e-23 Score=209.92 Aligned_cols=249 Identities=15% Similarity=0.179 Sum_probs=154.6
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCC--------CCCCce-eeCCCCC---------------------
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLP--------VPFGLV-RYGVAPD--------------------- 61 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~--------~~gg~~-~~g~~p~--------------------- 61 (388)
..+||+||||||||+++|..|++ .|.+|+|||+.+ .+||.| +.||.|.
T Consensus 31 ~~~DVvVIGgGpaGl~aA~~la~--~G~~V~liEk~~~~~~~~~~~~GGtc~~~GciPsk~l~~~~~~~~~~~~~~~~g~ 108 (519)
T 3qfa_A 31 YDYDLIIIGGGSGGLAAAKEAAQ--YGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQALQDSRNYGW 108 (519)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHH--TTCCEEEECCCCCCTTCCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTB
T ss_pred CCCCEEEECCCHHHHHHHHHHHh--CCCeEEEEeccCccccccCCCcccccCCcCccchHHHHHHHHHHHHHHHHHhcCc
Confidence 45799999999999999999999 899999999854 678876 3344331
Q ss_pred ------CcchhHHHH-----------HHHHhhcCCCcEEEceEEEEE-----Eeeeccc---ccccCEEEEeeCCCCCCC
Q psy4525 62 ------HPEVKNVIN-----------TFTKTGDNPRVNFYGNICLGQ-----DISLGDL---TNAYHAVVLTYGADNDKK 116 (388)
Q Consensus 62 ------~~~~~~~~~-----------~~~~~~~~~~i~~~~~~~v~~-----~~~~~~~---~~~yd~lvlAtG~~~~~~ 116 (388)
......+.. .+...++..+++++.+..... .+...+. ...||+||||||+.+ +.
T Consensus 109 ~~~~~~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~gV~~i~g~a~~~d~~~v~v~~~~g~~~~i~~d~lViATGs~p-~~ 187 (519)
T 3qfa_A 109 KVEETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENAYGQFIGPHRIKATNNKGKEKIYSAERFLIATGERP-RY 187 (519)
T ss_dssp CCCSSCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETTEEEEECTTCCCCEEEEEEEEECCCEEE-CC
T ss_pred ccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCCEEEEEcCCCCEEEEECCEEEEECCCCc-CC
Confidence 111111111 122344556888876654321 1222222 247999999999988 47
Q ss_pred CCCCCCCCCCeeecccccccccCCCCccccCcCCCCCeEEEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCC
Q psy4525 117 LNIPGEDGKNIISARSFVGWYNGLPEDASLDLSLDCEEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRI 196 (388)
Q Consensus 117 ~~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (388)
|++||.+. .+++..++. .....+++++|||+|++|+|+|..|. +.+
T Consensus 188 p~i~G~~~-~~~t~~~~~------------~l~~~~~~vvVIGgG~ig~E~A~~l~--------------------~~G- 233 (519)
T 3qfa_A 188 LGIPGDKE-YCISSDDLF------------SLPYCPGKTLVVGASYVALECAGFLA--------------------GIG- 233 (519)
T ss_dssp CCCTTHHH-HCBCHHHHT------------TCSSCCCSEEEECCSHHHHHHHHHHH--------------------HTT-
T ss_pred CCCCCccC-ceEcHHHHh------------hhhhcCCeEEEECCcHHHHHHHHHHH--------------------HcC-
Confidence 78888531 233333332 11223578999999999999999876 233
Q ss_pred cEEEEEeecCcccccCCHHHHHHHhcCCCceEEecccccccchhhhccccchhhHHHHHHHhhCCCCCCCCCCceeEEEE
Q psy4525 197 KSVNLVGRRGALQVAFTIKEFREMTKLPHVQTVFRNEQLCGVHEASATLARPRKRLTELILKTSNPDESKSNCSKYFRPI 276 (388)
Q Consensus 197 ~~V~~i~r~~~~~~~~~~~el~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 276 (388)
.+||++.|. .+...+. +++. +.+.+.+. +.||+++
T Consensus 234 ~~Vtlv~~~-~~l~~~d-~~~~-------------------------------~~~~~~l~------------~~GV~v~ 268 (519)
T 3qfa_A 234 LDVTVMVRS-ILLRGFD-QDMA-------------------------------NKIGEHME------------EHGIKFI 268 (519)
T ss_dssp CCEEEEESS-CSSTTSC-HHHH-------------------------------HHHHHHHH------------HTTCEEE
T ss_pred CeEEEEecc-cccccCC-HHHH-------------------------------HHHHHHHH------------HCCCEEE
Confidence 469999985 3322221 2221 22222222 5799999
Q ss_pred ecCcceeeeeCCCC--ceeEEEEccCccccCCceeEEecceEEEccccCCccCC-----CCCccc-CCCccccCCCC
Q psy4525 277 FLRSPTEFKLNDNG--AITGINFANQQALVTEDTELIPSGIAFRSIGYQSRCVD-----SDIPFN-EKSCTVIPKEG 345 (388)
Q Consensus 277 ~~~~~~~i~~~~~~--~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~p~~~~-----~~l~~~-~~~gi~l~~~~ 345 (388)
++..++++....++ ....+.+... ..+...++++|.||+|+|++||+.. .+++++ .++++.+|+..
T Consensus 269 ~~~~v~~v~~~~~~~~~~~~v~~~~~---~g~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~~G~I~Vd~~~ 342 (519)
T 3qfa_A 269 RQFVPIKVEQIEAGTPGRLRVVAQST---NSEEIIEGEYNTVMLAIGRDACTRKIGLETVGVKINEKTGKIPVTDEE 342 (519)
T ss_dssp ESEEEEEEEEEECCTTCEEEEEEEES---SSSCEEEEEESEEEECSCEEESCSSSCSTTTTCCCCTTTCCBCCCTTS
T ss_pred eCCeEEEEEEccCCCCceEEEEEEEC---CCcEEEEEECCEEEEecCCcccCCCCChhhcCcEEcCCCCeEeeCCCC
Confidence 99888777643221 1122322110 0112246899999999999999742 345666 34567777654
No 67
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=99.91 E-value=1.2e-23 Score=208.64 Aligned_cols=248 Identities=14% Similarity=0.217 Sum_probs=159.2
Q ss_pred CCCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCC-------C--CCCCce-eeCCCCC-------------------
Q psy4525 11 QLKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKL-------P--VPFGLV-RYGVAPD------------------- 61 (388)
Q Consensus 11 ~~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~-------~--~~gg~~-~~g~~p~------------------- 61 (388)
...+||+||||||||+++|..|++ .|.+|+|||+. . .+||.| ++||.|.
T Consensus 7 ~~~~DvvVIGgG~aGl~aA~~la~--~G~~V~liEk~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~~~~~~~~~~~~~~ 84 (483)
T 3dgh_A 7 SYDYDLIVIGGGSAGLACAKEAVL--NGARVACLDFVKPTPTLGTKWGVGGTCVNVGCIPKKLMHQASLLGEAVHEAAAY 84 (483)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHH--TTCCEEEECCCCCCTTTTCCCCSSCHHHHHSHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCEEEECcCHHHHHHHHHHHH--CCCEEEEEEeccccccccccCCcCCeecccCchhhHHHHHHHHHHHHHHHHHhc
Confidence 346899999999999999999999 89999999942 1 378877 3343321
Q ss_pred --------CcchhHHHHH-----------HHHhhcCCCcEEEceEEEEE-----Eeeeccc--ccccCEEEEeeCCCCCC
Q psy4525 62 --------HPEVKNVINT-----------FTKTGDNPRVNFYGNICLGQ-----DISLGDL--TNAYHAVVLTYGADNDK 115 (388)
Q Consensus 62 --------~~~~~~~~~~-----------~~~~~~~~~i~~~~~~~v~~-----~~~~~~~--~~~yd~lvlAtG~~~~~ 115 (388)
......+..+ +...+...+++++.+..... .+...+. ...||+||||||+.+ +
T Consensus 85 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~a~~~~~~~v~v~~~~g~~~~~~d~lviATGs~p-~ 163 (483)
T 3dgh_A 85 GWNVDDKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVEYINGLGSFVDSHTLLAKLKSGERTITAQTFVIAVGGRP-R 163 (483)
T ss_dssp TBCCCCCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETTEEEEECTTCCEEEEEEEEEECCCEEE-C
T ss_pred CcccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEccCCEEEEEeCCCeEEEEcCEEEEeCCCCc-C
Confidence 1112222221 12234556788776544321 1223333 248999999999987 4
Q ss_pred CCCCCCCCCCCeeecccccccccCCCCccccCcCCCCCeEEEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCC
Q psy4525 116 KLNIPGEDGKNIISARSFVGWYNGLPEDASLDLSLDCEEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSR 195 (388)
Q Consensus 116 ~~~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~ 195 (388)
.|++||.+. .+++..++. .....+++++|||+|++|+|+|..|+ +.+
T Consensus 164 ~p~i~G~~~-~~~~~~~~~------------~~~~~~~~vvViGgG~~g~E~A~~l~--------------------~~g 210 (483)
T 3dgh_A 164 YPDIPGAVE-YGITSDDLF------------SLDREPGKTLVVGAGYIGLECAGFLK--------------------GLG 210 (483)
T ss_dssp CCSSTTHHH-HCBCHHHHT------------TCSSCCCEEEEECCSHHHHHHHHHHH--------------------HTT
T ss_pred CCCCCCccc-ccCcHHHHh------------hhhhcCCcEEEECCCHHHHHHHHHHH--------------------HcC
Confidence 778888642 223333332 11224689999999999999999876 233
Q ss_pred CcEEEEEeecCcccccCCHHHHHHHhcCCCceEEecccccccchhhhccccchhhHHHHHHHhhCCCCCCCCCCceeEEE
Q psy4525 196 IKSVNLVGRRGALQVAFTIKEFREMTKLPHVQTVFRNEQLCGVHEASATLARPRKRLTELILKTSNPDESKSNCSKYFRP 275 (388)
Q Consensus 196 ~~~V~~i~r~~~~~~~~~~~el~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 275 (388)
.+|+++.|. .+...+ ++++. +.+.+.+. +.||++
T Consensus 211 -~~Vtlv~~~-~~l~~~-d~~~~-------------------------------~~l~~~l~------------~~Gv~i 244 (483)
T 3dgh_A 211 -YEPTVMVRS-IVLRGF-DQQMA-------------------------------ELVAASME------------ERGIPF 244 (483)
T ss_dssp -CEEEEEESS-CSSTTS-CHHHH-------------------------------HHHHHHHH------------HTTCCE
T ss_pred -CEEEEEeCC-CCCccc-CHHHH-------------------------------HHHHHHHH------------hCCCEE
Confidence 579999885 332222 12211 12222222 579999
Q ss_pred EecCcceeeeeCCCCceeEEEEccCccccCCceeEEecceEEEccccCCccCC-----CCCcccCCCccccCCCC
Q psy4525 276 IFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPSGIAFRSIGYQSRCVD-----SDIPFNEKSCTVIPKEG 345 (388)
Q Consensus 276 ~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~p~~~~-----~~l~~~~~~gi~l~~~~ 345 (388)
++++.++++..++++.+ .+.+.++. +++..++++|.||+|+|++|++.. .++++++ +++.+|+..
T Consensus 245 ~~~~~v~~i~~~~~~~~-~v~~~~~~---~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~-G~i~vd~~~ 314 (483)
T 3dgh_A 245 LRKTVPLSVEKQDDGKL-LVKYKNVE---TGEESEDVYDTVLWAIGRKGLVDDLNLPNAGVTVQK-DKIPVDSQE 314 (483)
T ss_dssp EETEEEEEEEECTTSCE-EEEEEETT---TCCEEEEEESEEEECSCEEECCGGGTGGGTTCCCBT-TBBCCCTTC
T ss_pred EeCCEEEEEEEcCCCcE-EEEEecCC---CCceeEEEcCEEEECcccccCcCcCCchhcCccccC-CEEEECcCC
Confidence 99999999987544443 35554321 244568999999999999999742 4567776 678777654
No 68
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=99.91 E-value=7.9e-24 Score=208.02 Aligned_cols=251 Identities=17% Similarity=0.247 Sum_probs=161.4
Q ss_pred CcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCCC----CCCcchhHHHHHHHHhhcCCCcEEEceEEE
Q psy4525 14 PNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVA----PDHPEVKNVINTFTKTGDNPRVNFYGNICL 89 (388)
Q Consensus 14 ~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~~----p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v 89 (388)
++|+|||||+||+++|..|++..++.+|+|||+++.++ .+.++.. ......+++.....+.+++.+++++.+..+
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v 79 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFIS-FLSAGMQLYLEGKVKDVNSVRYMTGEKMESRGVNVFSNTEI 79 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSS-BCGGGHHHHHTTSSCCGGGSBSCCHHHHHHTTCEEEETEEE
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccC-cccccchhhhcCccCCHHHhhcCCHHHHHHCCCEEEECCEE
Confidence 48999999999999999999954589999999987654 2221110 000112222222233444568888766665
Q ss_pred E-E-----Eeeecc---cc---cccCEEEEeeCCCCCCCCCCCCCCCCCeeecccccccccCCCCccccCcCCCCCeEEE
Q psy4525 90 G-Q-----DISLGD---LT---NAYHAVVLTYGADNDKKLNIPGEDGKNIISARSFVGWYNGLPEDASLDLSLDCEEATI 157 (388)
Q Consensus 90 ~-~-----~~~~~~---~~---~~yd~lvlAtG~~~~~~~~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~vvV 157 (388)
. . .+.+.. .+ ..||+||+|||+.+ +.|++||.+.+++++..++...... ........+++++|
T Consensus 80 ~~i~~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p-~~p~i~G~~~~~v~~~~~~~~~~~l----~~~~~~~~~~~vvI 154 (447)
T 1nhp_A 80 TAIQPKEHQVTVKDLVSGEERVENYDKLIISPGAVP-FELDIPGKDLDNIYLMRGRQWAIKL----KQKTVDPEVNNVVV 154 (447)
T ss_dssp EEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEE-CCCCSTTTTSBSEECCCHHHHHHHH----HHHHTCTTCCEEEE
T ss_pred EEEeCCCCEEEEEecCCCceEEEeCCEEEEcCCCCc-CCCCCCCCCCCCeEEECCHHHHHHH----HHHhhhcCCCeEEE
Confidence 2 1 233322 22 47999999999987 5778999877788876655321100 00000114789999
Q ss_pred EcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecCcccccCCHHHHHHHhcCCCceEEeccccccc
Q psy4525 158 LGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRGALQVAFTIKEFREMTKLPHVQTVFRNEQLCG 237 (388)
Q Consensus 158 IGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~~~~~~~~~~el~~l~~~~~~~~~~~~~~~~~ 237 (388)
||+|++|+|+|..|. +.+ .+|+++.+.+.+...+.++++.
T Consensus 155 iG~G~~g~e~A~~l~--------------------~~g-~~Vtlv~~~~~~l~~~~~~~~~------------------- 194 (447)
T 1nhp_A 155 IGSGYIGIEAAEAFA--------------------KAG-KKVTVIDILDRPLGVYLDKEFT------------------- 194 (447)
T ss_dssp ECCSHHHHHHHHHHH--------------------HTT-CEEEEEESSSSTTTTTCCHHHH-------------------
T ss_pred ECCCHHHHHHHHHHH--------------------HCC-CeEEEEecCcccccccCCHHHH-------------------
Confidence 999999999999775 233 4799999987654322222221
Q ss_pred chhhhccccchhhHHHHHHHhhCCCCCCCCCCceeEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEecceEE
Q psy4525 238 VHEASATLARPRKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPSGIAF 317 (388)
Q Consensus 238 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi 317 (388)
+.+.+.+. +.||++++++.++++..+ +.+..+.. ++.++++|.||
T Consensus 195 ------------~~l~~~l~------------~~gv~i~~~~~v~~i~~~--~~v~~v~~---------~~~~i~~d~vi 239 (447)
T 1nhp_A 195 ------------DVLTEEME------------ANNITIATGETVERYEGD--GRVQKVVT---------DKNAYDADLVV 239 (447)
T ss_dssp ------------HHHHHHHH------------TTTEEEEESCCEEEEECS--SBCCEEEE---------SSCEEECSEEE
T ss_pred ------------HHHHHHHH------------hCCCEEEcCCEEEEEEcc--CcEEEEEE---------CCCEEECCEEE
Confidence 12222222 579999999999999853 44444432 22479999999
Q ss_pred EccccCCccC--CCCCcccCCCccccCCCC
Q psy4525 318 RSIGYQSRCV--DSDIPFNEKSCTVIPKEG 345 (388)
Q Consensus 318 ~a~G~~p~~~--~~~l~~~~~~gi~l~~~~ 345 (388)
+|+|++|+.. ...++++.++++.+|+..
T Consensus 240 ~a~G~~p~~~~~~~~~~~~~~G~i~Vd~~~ 269 (447)
T 1nhp_A 240 VAVGVRPNTAWLKGTLELHPNGLIKTDEYM 269 (447)
T ss_dssp ECSCEEESCGGGTTTSCBCTTSCBCCCTTC
T ss_pred ECcCCCCChHHHHhhhhhcCCCcEEECccc
Confidence 9999999863 212556555558777653
No 69
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=99.91 E-value=3.9e-24 Score=212.52 Aligned_cols=248 Identities=13% Similarity=0.117 Sum_probs=157.9
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcC--------CCCCCCce-eeCCCCC---------------------
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEK--------LPVPFGLV-RYGVAPD--------------------- 61 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~--------~~~~gg~~-~~g~~p~--------------------- 61 (388)
..+||+||||||||+++|..|++ .|.+|+|||+ ...+||.| ++||.|.
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~--~G~~V~liEk~~~~~~~~~~~~GGtc~~~gciPsk~l~~~~~~~~~~~~~~~~g~ 82 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQ--LGKKVAVADYVEPSPRGTKWGLGGTCVNVGCIPKKLMHQAALLGGMIRDAHHYGW 82 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH--TTCCEEEECCCCCCTTSCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CcCCEEEECCCHHHHHHHHHHHh--CCCeEEEEEecccccccccCCcCCeecccCCcccHHHHHHHHHHHHHHHHHhcCc
Confidence 45899999999999999999999 8999999997 45688876 3343321
Q ss_pred ------CcchhHHHH-----------HHHHhhcCCCcEEEceEEEE-----EEeeeccc---ccccCEEEEeeCCCCCCC
Q psy4525 62 ------HPEVKNVIN-----------TFTKTGDNPRVNFYGNICLG-----QDISLGDL---TNAYHAVVLTYGADNDKK 116 (388)
Q Consensus 62 ------~~~~~~~~~-----------~~~~~~~~~~i~~~~~~~v~-----~~~~~~~~---~~~yd~lvlAtG~~~~~~ 116 (388)
......+.. .+...+.+.+++++.+.... ..+...+. ...||+||||||+.+ +.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~g~~~~~~~~~v~v~~~~g~~~~~~~d~lViATGs~p-~~ 161 (488)
T 3dgz_A 83 EVAQPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKASFVDEHTVRGVDKGGKATLLSAEHIVIATGGRP-RY 161 (488)
T ss_dssp CCCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECCEEEESSSSEEEEECTTSCEEEEEEEEEEECCCEEE-CC
T ss_pred ccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCeEEEEeCCCceEEEECCEEEEcCCCCC-CC
Confidence 111111111 12234455688887655432 12222222 348999999999988 46
Q ss_pred CC-CCCCCCCCeeecccccccccCCCCccccCcCCCCCeEEEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCC
Q psy4525 117 LN-IPGEDGKNIISARSFVGWYNGLPEDASLDLSLDCEEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSR 195 (388)
Q Consensus 117 ~~-i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~ 195 (388)
|+ +||.+. .+++..++. .....+++++|||+|++|+|+|..|. +.+
T Consensus 162 p~~i~G~~~-~~~~~~~~~------------~~~~~~~~vvViGgG~ig~E~A~~l~--------------------~~g 208 (488)
T 3dgz_A 162 PTQVKGALE-YGITSDDIF------------WLKESPGKTLVVGASYVALECAGFLT--------------------GIG 208 (488)
T ss_dssp CSSCBTHHH-HCBCHHHHT------------TCSSCCCSEEEECCSHHHHHHHHHHH--------------------HTT
T ss_pred CCCCCCccc-ccCcHHHHH------------hhhhcCCeEEEECCCHHHHHHHHHHH--------------------HcC
Confidence 66 888632 223333332 11224678999999999999999876 233
Q ss_pred CcEEEEEeecCcccccCCHHHHHHHhcCCCceEEecccccccchhhhccccchhhHHHHHHHhhCCCCCCCCCCceeEEE
Q psy4525 196 IKSVNLVGRRGALQVAFTIKEFREMTKLPHVQTVFRNEQLCGVHEASATLARPRKRLTELILKTSNPDESKSNCSKYFRP 275 (388)
Q Consensus 196 ~~~V~~i~r~~~~~~~~~~~el~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 275 (388)
.+|+++.|.. +...+ ++++. +.+.+.+. +.||++
T Consensus 209 -~~Vtlv~~~~-~l~~~-d~~~~-------------------------------~~l~~~l~------------~~gv~~ 242 (488)
T 3dgz_A 209 -LDTTVMMRSI-PLRGF-DQQMS-------------------------------SLVTEHME------------SHGTQF 242 (488)
T ss_dssp -CCEEEEESSC-SSTTS-CHHHH-------------------------------HHHHHHHH------------HTTCEE
T ss_pred -CceEEEEcCc-ccccC-CHHHH-------------------------------HHHHHHHH------------HCCCEE
Confidence 4799999864 22221 12211 22222322 579999
Q ss_pred EecCcceeeeeCCCCceeEEEEccCccccCCceeEEecceEEEccccCCccCC-----CCCccc-CCCccccCCCC
Q psy4525 276 IFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPSGIAFRSIGYQSRCVD-----SDIPFN-EKSCTVIPKEG 345 (388)
Q Consensus 276 ~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~p~~~~-----~~l~~~-~~~gi~l~~~~ 345 (388)
++++.+.++...+++.+ .+.+.+. ..++..+++||.||+|+|++||+.. .++.++ +++++.+|+..
T Consensus 243 ~~~~~v~~i~~~~~~~~-~v~~~~~---~~g~~~~~~~D~vi~a~G~~p~~~~l~l~~~g~~~~~~~G~i~vd~~~ 314 (488)
T 3dgz_A 243 LKGCVPSHIKKLPTNQL-QVTWEDH---ASGKEDTGTFDTVLWAIGRVPETRTLNLEKAGISTNPKNQKIIVDAQE 314 (488)
T ss_dssp EETEEEEEEEECTTSCE-EEEEEET---TTTEEEEEEESEEEECSCEEESCGGGTGGGGTCCBCSSSCCBCCCTTS
T ss_pred EeCCEEEEEEEcCCCcE-EEEEEeC---CCCeeEEEECCEEEEcccCCcccCcCCccccCcEecCCCCeEeECCCC
Confidence 99999999986433433 3443221 0133346899999999999999742 356676 56668777654
No 70
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.91 E-value=3.4e-23 Score=203.46 Aligned_cols=163 Identities=18% Similarity=0.221 Sum_probs=114.7
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCC--cEEEEcCCCCCCCceeeCCC-------C----------------------
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQS--TVDIYEKLPVPFGLVRYGVA-------P---------------------- 60 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~--~v~lie~~~~~gg~~~~g~~-------p---------------------- 60 (388)
..++|+||||||+|+++|..|++ .|. +|+|||+.+.+||.|.+... |
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~--~G~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~ 82 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLA--EKAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPS 82 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHT--TTCCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCC
T ss_pred CCCEEEEECccHHHHHHHHHHHh--cCCCCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCccC
Confidence 35799999999999999999999 888 99999999889998865310 0
Q ss_pred ---------------------------CCcchhHHHHHHHHhhcCCCcEEEceEEEEE--------Eeeecc---c----
Q psy4525 61 ---------------------------DHPEVKNVINTFTKTGDNPRVNFYGNICLGQ--------DISLGD---L---- 98 (388)
Q Consensus 61 ---------------------------~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~--------~~~~~~---~---- 98 (388)
.+....++.+++.+++++++..+++++.|.. .+++.+ +
T Consensus 83 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~~~~V~~~~~~~G~~~~ 162 (447)
T 2gv8_A 83 PLYRDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKDGSWVVTYKGTKAGSPIS 162 (447)
T ss_dssp CCCTTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEETTEEEEEEEESSTTCCEE
T ss_pred chhhhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCCCeEEEEEeecCCCCeeE
Confidence 0111335666677777666666777766532 233332 2
Q ss_pred ccccCEEEEeeCCCC-CCCCCCCCCCC------CCeeecccccccccCCCCccccCcCCCCCeEEEEcCChHHHHHHHHh
Q psy4525 99 TNAYHAVVLTYGADN-DKKLNIPGEDG------KNIISARSFVGWYNGLPEDASLDLSLDCEEATILGQGNVAMDVARIL 171 (388)
Q Consensus 99 ~~~yd~lvlAtG~~~-~~~~~i~g~~~------~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVIGgG~sg~e~a~~L 171 (388)
...||+||+|||+.. ++.|++||.+. ..++++.++.. ...+.+++|+|||+|++|+|+|..|
T Consensus 163 ~~~~d~VVvAtG~~s~p~~p~i~G~~~~~~~~~g~v~~~~~~~~-----------~~~~~~k~VvVvG~G~sg~e~A~~l 231 (447)
T 2gv8_A 163 KDIFDAVSICNGHYEVPYIPNIKGLDEYAKAVPGSVLHSSLFRE-----------PELFVGESVLVVGGASSANDLVRHL 231 (447)
T ss_dssp EEEESEEEECCCSSSSBCBCCCBTHHHHHHHSTTSEEEGGGCCC-----------GGGGTTCCEEEECSSHHHHHHHHHH
T ss_pred EEEeCEEEECCCCCCCCCCCCCCChhhhhccCCccEEEecccCC-----------hhhcCCCEEEEEccCcCHHHHHHHH
Confidence 347999999999833 24667888541 23565555431 1123589999999999999999988
Q ss_pred ccCCcccccccCchhHHHhhhcCCCcE-EEEEeecCcc
Q psy4525 172 LSPVDQLKSTDITEHSLEKLSTSRIKS-VNLVGRRGAL 208 (388)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-V~~i~r~~~~ 208 (388)
+ ..+++ |+++.|++.+
T Consensus 232 ~---------------------~~~~~~V~l~~r~~~~ 248 (447)
T 2gv8_A 232 T---------------------PVAKHPIYQSLLGGGD 248 (447)
T ss_dssp T---------------------TTSCSSEEEECTTCCS
T ss_pred H---------------------HHhCCcEEEEeCCCCc
Confidence 7 22346 9999988643
No 71
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.91 E-value=3e-23 Score=193.51 Aligned_cols=251 Identities=13% Similarity=0.141 Sum_probs=157.3
Q ss_pred CCCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceee---CCC-CCCcchhHHHHHHHHhhcCCC-cEEEc
Q psy4525 11 QLKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRY---GVA-PDHPEVKNVINTFTKTGDNPR-VNFYG 85 (388)
Q Consensus 11 ~~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~---g~~-p~~~~~~~~~~~~~~~~~~~~-i~~~~ 85 (388)
++.+||+||||||||++||.++++ .|.+|+|||+. .+||.+.. ++. +......++.....+.+.+++ +.+..
T Consensus 4 M~~yDVvIIGaGpAGlsAA~~lar--~g~~v~lie~~-~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (304)
T 4fk1_A 4 MKYIDCAVIGAGPAGLNASLVLGR--ARKQIALFDNN-TNRNRVTQNSHGFITRDGIKPEEFKEIGLNEVMKYPSVHYYE 80 (304)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHH--TTCCEEEEECS-CCGGGGSSCBCCSTTCTTBCHHHHHHHHHHHHTTSTTEEEEE
T ss_pred CCCcCEEEECCCHHHHHHHHHHHH--CCCCEEEEeCC-CCCCeeeeecCCccCCCCCCHHHHHHHHHHHHHhcCCEEEEe
Confidence 556899999999999999999999 89999999987 45665522 221 112245666666666666654 55554
Q ss_pred eEEEEE--------Eeeeccc-ccccCEEEEeeCCCCCCCCCCCCCCC---CCeeecccccccccCCCCccccCcCCCCC
Q psy4525 86 NICLGQ--------DISLGDL-TNAYHAVVLTYGADNDKKLNIPGEDG---KNIISARSFVGWYNGLPEDASLDLSLDCE 153 (388)
Q Consensus 86 ~~~v~~--------~~~~~~~-~~~yd~lvlAtG~~~~~~~~i~g~~~---~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (388)
...+.. .+...+. ...||+||||||+.+ +.|++||.+. .++++..... ....+++
T Consensus 81 ~~~~~~~~~~~~~~~v~~~~g~~~~a~~liiATGs~p-~~p~i~G~~~~~~~~v~~~~~~~------------~~~~~~~ 147 (304)
T 4fk1_A 81 KTVVMITKQSTGLFEIVTKDHTKYLAERVLLATGMQE-EFPSIPNVREYYGKSLFSCPYCD------------GWELKDQ 147 (304)
T ss_dssp CCEEEEEECTTSCEEEEETTCCEEEEEEEEECCCCEE-ECCSCTTHHHHBTTTEESCHHHH------------SGGGTTS
T ss_pred eEEEEeeecCCCcEEEEECCCCEEEeCEEEEccCCcc-ccccccCccccccceeeeccccc------------hhHhcCC
Confidence 443322 1223333 337999999999987 6888998541 2233222211 2234567
Q ss_pred eEEEEcCChH-HHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecCcccccCCHHHHHHHhcCCCceEEecc
Q psy4525 154 EATILGQGNV-AMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRGALQVAFTIKEFREMTKLPHVQTVFRN 232 (388)
Q Consensus 154 ~vvVIGgG~s-g~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~~~~~~~~~~el~~l~~~~~~~~~~~~ 232 (388)
+++|||||.. ++|+|..+. ....+|+++.|...+..
T Consensus 148 ~~~VIggG~~~~~e~a~~~~---------------------~~~~~v~i~~~~~~~~~---------------------- 184 (304)
T 4fk1_A 148 PLIIISENEDHTLHMTKLVY---------------------NWSTDLVIATNGNELSQ---------------------- 184 (304)
T ss_dssp CEEEECCSHHHHHHHHHHHT---------------------TTCSCEEEECSSCCCCH----------------------
T ss_pred ceeeecCCCchhhhHHHHHH---------------------hCCceEEEEeccccchh----------------------
Confidence 8899988876 567776554 34467888877654311
Q ss_pred cccccchhhhccccchhhHHHHHHHhhCCCCCCCCCCceeEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEe
Q psy4525 233 EQLCGVHEASATLARPRKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIP 312 (388)
Q Consensus 233 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~ 312 (388)
.+.+.+. .+++.++.. .++.+..+ ++.+..+++ .++++++
T Consensus 185 ------------------~~~~~l~------------~~g~~~~~~-~v~~~~~~-~~~~~~v~~--------~~g~~i~ 224 (304)
T 4fk1_A 185 ------------------TIMDELS------------NKNIPVITE-SIRTLQGE-GGYLKKVEF--------HSGLRIE 224 (304)
T ss_dssp ------------------HHHHHHH------------TTTCCEECS-CEEEEESG-GGCCCEEEE--------TTSCEEC
T ss_pred ------------------hhhhhhh------------ccceeEeee-eEEEeecC-CCeeeeeec--------cccceee
Confidence 1111121 456666654 35666543 456666764 4556889
Q ss_pred cceEEEccccCCccC---CCCCcccCCCccccCCCCCCeecchhhHHhHHHH
Q psy4525 313 SGIAFRSIGYQSRCV---DSDIPFNEKSCTVIPKEGVPVVTWEGWKAIDKEE 361 (388)
Q Consensus 313 ~D~Vi~a~G~~p~~~---~~~l~~~~~~gi~l~~~~~~~~~~~~w~~~~~~~ 361 (388)
+|.+|+++|.+|+.. ..++++++++.|.+|+.....+ .+.|...|+..
T Consensus 225 ~~~~vi~~g~~~~~~~~~~~g~~~~~~G~I~vd~~~~Ts~-p~IyA~GDv~~ 275 (304)
T 4fk1_A 225 RAGGFIVPTFFRPNQFIEQLGCELQSNGTFVIDDFGRTSE-KNIYLAGETTT 275 (304)
T ss_dssp CCEEEECCEEECSSCHHHHTTCCCCTTSSSCSSTTCBCSS-TTEEECSHHHH
T ss_pred ecceeeeeccccCChhhhhcCeEECCCCCEEECcCCccCC-CCEEEEeccCC
Confidence 888877776665542 2577788766788888765333 36788888764
No 72
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.90 E-value=5.1e-25 Score=210.90 Aligned_cols=238 Identities=18% Similarity=0.202 Sum_probs=151.9
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCC---ceeeCCCCCCcchhHHHHHHHHhhcCCCcEEEceEE
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFG---LVRYGVAPDHPEVKNVINTFTKTGDNPRVNFYGNIC 88 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg---~~~~g~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 88 (388)
...+++||||||||++||..|++ .+ +|+|||+++..+. .+.+.. ......+++.....+++++.+++++.++.
T Consensus 7 ~~~~vvIIGgG~AGl~aA~~l~~--~g-~V~lie~~~~~~~~~~~l~~~~-~g~~~~~~~~~~~~~~~~~~~v~~~~g~~ 82 (367)
T 1xhc_A 7 HGSKVVIVGNGPGGFELAKQLSQ--TY-EVTVIDKEPVPYYSKPMLSHYI-AGFIPRNRLFPYSLDWYRKRGIEIRLAEE 82 (367)
T ss_dssp --CEEEEECCSHHHHHHHHHHTT--TS-EEEEECSSSSCCCCSTTHHHHH-TTSSCGGGGCSSCHHHHHHHTEEEECSCC
T ss_pred CCCcEEEECCcHHHHHHHHHHhh--cC-CEEEEECCCCCccccchhHHHH-hCCCCHHHhccCCHHHHHhCCcEEEECCE
Confidence 35699999999999999999998 78 9999999875421 111101 11112222222233444556888887754
Q ss_pred EE-EE-----eeecccccccCEEEEeeCCCCCCCCCCCCCCCCCeeecccccccccCCCCccccCcCCCCCeEEEEcCCh
Q psy4525 89 LG-QD-----ISLGDLTNAYHAVVLTYGADNDKKLNIPGEDGKNIISARSFVGWYNGLPEDASLDLSLDCEEATILGQGN 162 (388)
Q Consensus 89 v~-~~-----~~~~~~~~~yd~lvlAtG~~~~~~~~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVIGgG~ 162 (388)
+. .+ ++.+.....||+||||||+.+ +.|++|| .+++++..++..... .. .....+++++|||+|+
T Consensus 83 v~~id~~~~~V~~~g~~~~~d~lViATGs~p-~~p~i~G--~~~v~~~~~~~~~~~----l~--~~~~~~~~vvViGgG~ 153 (367)
T 1xhc_A 83 AKLIDRGRKVVITEKGEVPYDTLVLATGARA-REPQIKG--KEYLLTLRTIFDADR----IK--ESIENSGEAIIIGGGF 153 (367)
T ss_dssp EEEEETTTTEEEESSCEEECSEEEECCCEEE-CCCCSBT--GGGEECCCSHHHHHH----HH--HHHHHHSEEEEEECSH
T ss_pred EEEEECCCCEEEECCcEEECCEEEECCCCCC-CCCCCCC--cCCEEEEcCHHHHHH----HH--HHhhcCCcEEEECCCH
Confidence 32 21 332222348999999999988 5778888 456766544432110 00 0001258999999999
Q ss_pred HHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecCcccccCCHHHHHHHhcCCCceEEecccccccchhhh
Q psy4525 163 VAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRGALQVAFTIKEFREMTKLPHVQTVFRNEQLCGVHEAS 242 (388)
Q Consensus 163 sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~~~~~~~~~~el~~l~~~~~~~~~~~~~~~~~~~~~~ 242 (388)
+|+|+|..|. +.+ .+|+++.|.+.+.. + ++++.
T Consensus 154 ~g~E~A~~l~--------------------~~g-~~Vtlv~~~~~~l~-~-~~~~~------------------------ 186 (367)
T 1xhc_A 154 IGLELAGNLA--------------------EAG-YHVKLIHRGAMFLG-L-DEELS------------------------ 186 (367)
T ss_dssp HHHHHHHHHH--------------------HTT-CEEEEECSSSCCTT-C-CHHHH------------------------
T ss_pred HHHHHHHHHH--------------------hCC-CEEEEEeCCCeecc-C-CHHHH------------------------
Confidence 9999999876 233 47999999876533 2 12221
Q ss_pred ccccchhhHHHHHHHhhCCCCCCCCCCceeEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEecceEEEcccc
Q psy4525 243 ATLARPRKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPSGIAFRSIGY 322 (388)
Q Consensus 243 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~ 322 (388)
+.+.+.+. +.||++++++.++++.. . .+.+ .+++ ++||.||+|+|+
T Consensus 187 -------~~l~~~l~------------~~gV~i~~~~~v~~i~~---~---~v~~--------~~g~-i~~D~vi~a~G~ 232 (367)
T 1xhc_A 187 -------NMIKDMLE------------ETGVKFFLNSELLEANE---E---GVLT--------NSGF-IEGKVKICAIGI 232 (367)
T ss_dssp -------HHHHHHHH------------HTTEEEECSCCEEEECS---S---EEEE--------TTEE-EECSCEEEECCE
T ss_pred -------HHHHHHHH------------HCCCEEEcCCEEEEEEe---e---EEEE--------CCCE-EEcCEEEECcCC
Confidence 12222222 57999999999998861 1 2333 3455 999999999999
Q ss_pred CCccC---CCCCcccCCCccccCCCC
Q psy4525 323 QSRCV---DSDIPFNEKSCTVIPKEG 345 (388)
Q Consensus 323 ~p~~~---~~~l~~~~~~gi~l~~~~ 345 (388)
+||+. ..+++.+ +|+.+|+..
T Consensus 233 ~p~~~ll~~~gl~~~--~gi~Vd~~~ 256 (367)
T 1xhc_A 233 VPNVDLARRSGIHTG--RGILIDDNF 256 (367)
T ss_dssp EECCHHHHHTTCCBS--SSEECCTTS
T ss_pred CcCHHHHHhCCCCCC--CCEEECCCc
Confidence 99972 1455554 578887643
No 73
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.90 E-value=1.8e-23 Score=206.28 Aligned_cols=301 Identities=11% Similarity=-0.014 Sum_probs=167.8
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCC-----CcEEEEcCCCCCCCcee---eCCC--------------CC---------
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQ-----STVDIYEKLPVPFGLVR---YGVA--------------PD--------- 61 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g-----~~v~lie~~~~~gg~~~---~g~~--------------p~--------- 61 (388)
.++|+||||||||+++|..|++ .| .+|+|||+.+.+|.... .+.. |.
T Consensus 30 ~~dVvIIGaG~aGl~aA~~L~~--~g~~~~~~~v~liE~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~l 107 (463)
T 3s5w_A 30 VHDLIGVGFGPSNIALAIALQE--RAQAQGALEVLFLDKQGDYRWHGNTLVSQSELQISFLKDLVSLRNPTSPYSFVNYL 107 (463)
T ss_dssp EESEEEECCSHHHHHHHHHHHH--HHHHHCCCCEEEEESCSSCCSSGGGCCSSCBCSSCTTSSSSTTTCTTCTTSHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHh--cccccCcccEEEEecCCCCCCcCCCCCCCCcCCcchhhccccccCCCCCCChhHhh
Confidence 4599999999999999999999 67 99999999987662110 0000 10
Q ss_pred ---------------CcchhHHHHHHHHhhcCCCcEEEceEEEEE-------------Eeeeccc-----ccccCEEEEe
Q psy4525 62 ---------------HPEVKNVINTFTKTGDNPRVNFYGNICLGQ-------------DISLGDL-----TNAYHAVVLT 108 (388)
Q Consensus 62 ---------------~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~-------------~~~~~~~-----~~~yd~lvlA 108 (388)
++...++..++..+++++++.+++++.|.. .+...+. ...||+||+|
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~lVlA 187 (463)
T 3s5w_A 108 HKHDRLVDFINLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTRALVVS 187 (463)
T ss_dssp HHTTCHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEESEEEEC
T ss_pred hhcCceeecccccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeCEEEEC
Confidence 112345666677777788887877765421 1222222 3479999999
Q ss_pred eCCCCCCCCC-CCCCCCC-CeeecccccccccCCCCccccCcCCCCCeEEEEcCChHHHHHHHHhccCCcccccccCchh
Q psy4525 109 YGADNDKKLN-IPGEDGK-NIISARSFVGWYNGLPEDASLDLSLDCEEATILGQGNVAMDVARILLSPVDQLKSTDITEH 186 (388)
Q Consensus 109 tG~~~~~~~~-i~g~~~~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~ 186 (388)
||+.+ +.|+ +++.... .+++..++......+. .....+++|+|||+|++|+|+|..|+
T Consensus 188 tG~~p-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~vvVvGgG~sg~e~a~~l~-------------- 247 (463)
T 3s5w_A 188 PGGTP-RIPQVFRALKGDGRVFHHSQYLEHMAKQP-----CSSGKPMKIAIIGGGQSAAEAFIDLN-------------- 247 (463)
T ss_dssp CCCEE-CCCGGGGGGTTCTTEEEGGGHHHHHCC------------CEEEEEECCSHHHHHHHHHHH--------------
T ss_pred CCCCC-CCcchhhhcCCCCcEEECHHHHhhHHHhh-----hcccCCCeEEEECCCHhHHHHHHHHH--------------
Confidence 99966 3443 3333333 5677766654322110 01114789999999999999999886
Q ss_pred HHHhhhcCCCcEEEEEeecCcccccCCHHHHHHHhcCCCceEEecccccccchhhhcccc-chhhHHHHHHHh-------
Q psy4525 187 SLEKLSTSRIKSVNLVGRRGALQVAFTIKEFREMTKLPHVQTVFRNEQLCGVHEASATLA-RPRKRLTELILK------- 258 (388)
Q Consensus 187 ~~~~~~~~~~~~V~~i~r~~~~~~~~~~~el~~l~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~------- 258 (388)
...+..+|+++.|++.+......+...++. .++..+. +..++ ..+.++...+..
T Consensus 248 -----~~~~~~~Vt~v~r~~~~~p~~~~~~~~~~~---------~p~~~~~----~~~l~~~~~~~~~~~~~~~~~~~~~ 309 (463)
T 3s5w_A 248 -----DSYPSVQADMILRASALKPADDSPFVNEVF---------APKFTDL----IYSREHAERERLLREYHNTNYSVVD 309 (463)
T ss_dssp -----HHCTTEEEEEECSSSSCCBCCCCHHHHGGG---------SHHHHHH----HHHSCHHHHHHHHHHTGGGTSSCBC
T ss_pred -----hcCCCCeEEEEEeCCCCcCccCCccchhcc---------ChhHHHH----HhcCCHHHHHHHHHHhhccCCCcCC
Confidence 112346899999998764432222221110 1110000 00111 111111111110
Q ss_pred ---------hCCCCCCCCCCceeEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEecceEEEccccCCccCC-
Q psy4525 259 ---------TSNPDESKSNCSKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPSGIAFRSIGYQSRCVD- 328 (388)
Q Consensus 259 ---------~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~p~~~~- 328 (388)
..... ......+|++++++.++++..+++ ...+.+.+. .+++.++++||.||+|||++|+...
T Consensus 310 ~~~~~~~~~~l~~~--~~~~~~~v~i~~~~~v~~v~~~~~--~~~v~~~~~---~~g~~~~~~~D~Vv~AtG~~p~~~~~ 382 (463)
T 3s5w_A 310 TDLIERIYGVFYRQ--KVSGIPRHAFRCMTTVERATATAQ--GIELALRDA---GSGELSVETYDAVILATGYERQLHRQ 382 (463)
T ss_dssp HHHHHHHHHHHHHH--HHHCCCCSEEETTEEEEEEEEETT--EEEEEEEET---TTCCEEEEEESEEEECCCEECCC-CT
T ss_pred HHHHHHHHHHHHHH--HhcCCCCeEEEeCCEEEEEEecCC--EEEEEEEEc---CCCCeEEEECCEEEEeeCCCCCCccc
Confidence 00000 001136899999999999986432 234444321 1345567999999999999999322
Q ss_pred --CCCcccCCCccccCCCCCCeec----chhhHHhHHHH
Q psy4525 329 --SDIPFNEKSCTVIPKEGVPVVT----WEGWKAIDKEE 361 (388)
Q Consensus 329 --~~l~~~~~~gi~l~~~~~~~~~----~~~w~~~~~~~ 361 (388)
.++.... +++.+|.......+ ...|...|+..
T Consensus 383 ~l~~l~~~~-g~i~v~~~~~~~~~~~~~~~Ifa~G~~~~ 420 (463)
T 3s5w_A 383 LLEPLAEYL-GDHEIGRDYRLQTDERCKVAIYAQGFSQA 420 (463)
T ss_dssp TTGGGGGGB-C--CCCTTSBCCBCTTBCSEEEESSCCHH
T ss_pred hhHHHHHHh-CCcccCcccccccCCCCCCeEEEcCCCcc
Confidence 1221111 56777665532221 12555555443
No 74
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=99.90 E-value=3.5e-23 Score=201.02 Aligned_cols=237 Identities=17% Similarity=0.188 Sum_probs=156.9
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCC--cEEEEcCCCCCCCceeeCCCCCCcchhHHHHH------HHHhhcCCCcEE
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQS--TVDIYEKLPVPFGLVRYGVAPDHPEVKNVINT------FTKTGDNPRVNF 83 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~--~v~lie~~~~~gg~~~~g~~p~~~~~~~~~~~------~~~~~~~~~i~~ 83 (388)
..++|+|||||+||+++|..|++ .+. +|++||+++.++ |.. |. ..+.+... +...+.+.++++
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~--~g~~~~V~lie~~~~~~----~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~v~~ 76 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQ--AGYQGLITVVGDEAERP----YDR-PP--LSKDFMAHGDAEKIRLDCKRAPEVEW 76 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHH--HTCCSCEEEEESSCSCC----BCS-GG--GGTHHHHHCCGGGSBCCCTTSCSCEE
T ss_pred CCCcEEEECChHHHHHHHHHHHc--cCCCCeEEEEECCCCCc----ccC-CC--CCHHHhCCCchhhhhHHHHHHCCCEE
Confidence 45799999999999999999999 565 699999987643 111 00 00111100 001456678999
Q ss_pred EceEEE-EE-----Eeeeccc-ccccCEEEEeeCCCCCCCCCC-CCCCCCCeeecccccccccCCCCccccCcCCCCCeE
Q psy4525 84 YGNICL-GQ-----DISLGDL-TNAYHAVVLTYGADNDKKLNI-PGEDGKNIISARSFVGWYNGLPEDASLDLSLDCEEA 155 (388)
Q Consensus 84 ~~~~~v-~~-----~~~~~~~-~~~yd~lvlAtG~~~~~~~~i-~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~v 155 (388)
+.++.+ .. .+++.+. ...||+||+|||+.+ +.+++ ||.+ +++++..+...... .. .....+++|
T Consensus 77 ~~~~~v~~i~~~~~~v~~~~g~~~~~d~lviAtG~~~-~~~~i~~G~~-~~v~~~~~~~~~~~----l~--~~~~~~~~v 148 (408)
T 2gqw_A 77 LLGVTAQSFDPQAHTVALSDGRTLPYGTLVLATGAAP-RALPTLQGAT-MPVHTLRTLEDARR----IQ--AGLRPQSRL 148 (408)
T ss_dssp EETCCEEEEETTTTEEEETTSCEEECSEEEECCCEEE-CCCGGGTTCS-SCEEECCSHHHHHH----HH--TTCCTTCEE
T ss_pred EcCCEEEEEECCCCEEEECCCCEEECCEEEECCCCCC-CCCCccCCCC-CcEEEECCHHHHHH----HH--HHhhcCCeE
Confidence 887643 22 2444443 348999999999987 57788 9877 77876554432100 00 112247999
Q ss_pred EEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecCcccccCCHHHHHHHhcCCCceEEeccccc
Q psy4525 156 TILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRGALQVAFTIKEFREMTKLPHVQTVFRNEQL 235 (388)
Q Consensus 156 vVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~~~~~~~~~~el~~l~~~~~~~~~~~~~~~ 235 (388)
+|||+|++|+|+|..|. +.+ .+|++++|.+.+.....++++.
T Consensus 149 vViGgG~~g~E~A~~l~--------------------~~g-~~Vtlv~~~~~~l~~~~~~~~~----------------- 190 (408)
T 2gqw_A 149 LIVGGGVIGLELAATAR--------------------TAG-VHVSLVETQPRLMSRAAPATLA----------------- 190 (408)
T ss_dssp EEECCSHHHHHHHHHHH--------------------HTT-CEEEEEESSSSSSTTTSCHHHH-----------------
T ss_pred EEECCCHHHHHHHHHHH--------------------hCC-CEEEEEEeCCcccccccCHHHH-----------------
Confidence 99999999999999876 233 4799999998764432222221
Q ss_pred ccchhhhccccchhhHHHHHHHhhCCCCCCCCCCceeEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEecce
Q psy4525 236 CGVHEASATLARPRKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPSGI 315 (388)
Q Consensus 236 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~ 315 (388)
+.+.+.+. +.||++++++.++++. + + .+.+ .++++++||.
T Consensus 191 --------------~~l~~~l~------------~~GV~i~~~~~v~~i~-~--~---~v~~--------~~g~~i~~D~ 230 (408)
T 2gqw_A 191 --------------DFVARYHA------------AQGVDLRFERSVTGSV-D--G---VVLL--------DDGTRIAADM 230 (408)
T ss_dssp --------------HHHHHHHH------------HTTCEEEESCCEEEEE-T--T---EEEE--------TTSCEEECSE
T ss_pred --------------HHHHHHHH------------HcCcEEEeCCEEEEEE-C--C---EEEE--------CCCCEEEcCE
Confidence 12222222 5799999999999997 2 2 3443 3446899999
Q ss_pred EEEccccCCccC---CCCCcccCCCccccCCCC
Q psy4525 316 AFRSIGYQSRCV---DSDIPFNEKSCTVIPKEG 345 (388)
Q Consensus 316 Vi~a~G~~p~~~---~~~l~~~~~~gi~l~~~~ 345 (388)
||+|+|++||+. ..+++++ +|+.+|+..
T Consensus 231 vi~a~G~~p~~~l~~~~gl~~~--~gi~Vd~~~ 261 (408)
T 2gqw_A 231 VVVGIGVLANDALARAAGLACD--DGIFVDAYG 261 (408)
T ss_dssp EEECSCEEECCHHHHHHTCCBS--SSEECCTTC
T ss_pred EEECcCCCccHHHHHhCCCCCC--CCEEECCCC
Confidence 999999999963 1355554 468887653
No 75
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=99.90 E-value=4.8e-23 Score=190.64 Aligned_cols=242 Identities=11% Similarity=0.064 Sum_probs=158.8
Q ss_pred CcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCce--eeCCCCC--CcchhHHHHHHHHhhcCC-CcEEEceEE
Q psy4525 14 PNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLV--RYGVAPD--HPEVKNVINTFTKTGDNP-RVNFYGNIC 88 (388)
Q Consensus 14 ~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~--~~g~~p~--~~~~~~~~~~~~~~~~~~-~i~~~~~~~ 88 (388)
++|+||||||||+++|..|++ .+.+|+|||+.+..+..+ .++. |. .....++..++.+.+.++ ++.++....
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~--~g~~v~lie~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v 79 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGR--ARKNILLVDAGERRNRFASHSHGF-LGQDGKAPGEIIAEARRQIERYPTIHWVEGRV 79 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--TTCCEEEEECCCCGGGGCSCCCSS-TTCTTCCHHHHHHHHHHHHTTCTTEEEEESCE
T ss_pred CCEEEECCCHHHHHHHHHHHh--CCCCEEEEeCCCcccccchhhcCC-cCCCCCCHHHHHHHHHHHHHhcCCeEEEEeEE
Confidence 689999999999999999999 899999999976544333 2223 22 235677888888888877 787765543
Q ss_pred EEE-------Eeeecccc-cccCEEEEeeCCCCCCCCCCCCCCC---CCeeecccccccccCCCCccccCcCCCCCeEEE
Q psy4525 89 LGQ-------DISLGDLT-NAYHAVVLTYGADNDKKLNIPGEDG---KNIISARSFVGWYNGLPEDASLDLSLDCEEATI 157 (388)
Q Consensus 89 v~~-------~~~~~~~~-~~yd~lvlAtG~~~~~~~~i~g~~~---~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~vvV 157 (388)
... .+...+.. ..||+||+|||+.+ +.+++||.+. .++++.. +. . .....+++++|
T Consensus 80 ~~i~~~~~~~~v~~~~g~~~~~d~vviAtG~~~-~~~~~~g~~~~~~~~~~~~~-~~---------~--~~~~~~~~v~v 146 (297)
T 3fbs_A 80 TDAKGSFGEFIVEIDGGRRETAGRLILAMGVTD-ELPEIAGLRERWGSAVFHCP-YC---------H--GYELDQGKIGV 146 (297)
T ss_dssp EEEEEETTEEEEEETTSCEEEEEEEEECCCCEE-ECCCCBTTGGGBTTTEESCH-HH---------H--TGGGTTCEEEE
T ss_pred EEEEEcCCeEEEEECCCCEEEcCEEEECCCCCC-CCCCCCCchhhcCCeeEEcc-cC---------c--chhhcCCEEEE
Confidence 322 23343433 48999999999987 4677888652 2222221 11 0 22335799999
Q ss_pred EcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecCcccccCCHHHHHHHhcCCCceEEeccccccc
Q psy4525 158 LGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRGALQVAFTIKEFREMTKLPHVQTVFRNEQLCG 237 (388)
Q Consensus 158 IGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~~~~~~~~~~el~~l~~~~~~~~~~~~~~~~~ 237 (388)
||+|++|+|+|..|. +.+ +|+++.|.... +.
T Consensus 147 vG~G~~~~e~a~~l~--------------------~~g--~v~~v~~~~~~---~~------------------------ 177 (297)
T 3fbs_A 147 IAASPMAIHHALMLP--------------------DWG--ETTFFTNGIVE---PD------------------------ 177 (297)
T ss_dssp ECCSTTHHHHHHHGG--------------------GTS--EEEEECTTTCC---CC------------------------
T ss_pred EecCccHHHHHHHhh--------------------hcC--cEEEEECCCCC---CC------------------------
Confidence 999999999999886 233 79999887541 11
Q ss_pred chhhhccccchhhHHHHHHHhhCCCCCCCCCCceeEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEecceEE
Q psy4525 238 VHEASATLARPRKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPSGIAF 317 (388)
Q Consensus 238 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi 317 (388)
+.+.+.+. +.||+++. ..++++..+ + .+.+ .+++++++|.||
T Consensus 178 ------------~~~~~~l~------------~~gv~i~~-~~v~~i~~~--~---~v~~--------~~g~~~~~D~vi 219 (297)
T 3fbs_A 178 ------------ADQHALLA------------ARGVRVET-TRIREIAGH--A---DVVL--------ADGRSIALAGLF 219 (297)
T ss_dssp ------------HHHHHHHH------------HTTCEEEC-SCEEEEETT--E---EEEE--------TTSCEEEESEEE
T ss_pred ------------HHHHHHHH------------HCCcEEEc-ceeeeeecC--C---eEEe--------CCCCEEEEEEEE
Confidence 11112222 57899985 888888742 2 4443 345689999999
Q ss_pred EccccCCccCC---CCCcccC--CC-ccccCCCCCCeecchhhHHhHH
Q psy4525 318 RSIGYQSRCVD---SDIPFNE--KS-CTVIPKEGVPVVTWEGWKAIDK 359 (388)
Q Consensus 318 ~a~G~~p~~~~---~~l~~~~--~~-gi~l~~~~~~~~~~~~w~~~~~ 359 (388)
+|+|++|+... .+++++. .+ .+.+|+.... -..+.|...|+
T Consensus 220 ~a~G~~p~~~~~~~~g~~~~~~~~G~~i~vd~~~~t-~~~~vya~GD~ 266 (297)
T 3fbs_A 220 TQPKLRITVDWIEKLGCAVEEGPMGSTIVTDPMKQT-TARGIFACGDV 266 (297)
T ss_dssp ECCEEECCCSCHHHHTCCEEEETTEEEECCCTTCBC-SSTTEEECSGG
T ss_pred EccCcccCchhHHhcCCccccCCCCceEEeCCCCcc-CCCCEEEEeec
Confidence 99999998642 3455553 22 3666665432 12244554444
No 76
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.90 E-value=3.4e-23 Score=196.45 Aligned_cols=161 Identities=12% Similarity=0.156 Sum_probs=114.4
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCCC-------------CC---------CcchhHHHH
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVA-------------PD---------HPEVKNVIN 70 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~~-------------p~---------~~~~~~~~~ 70 (388)
.++|+|||||++|+++|..|++ .|++|+|||+.+.+||.|.+... |. +....++..
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~--~g~~v~vie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRR--SGLSYVILDAEASPGGAWQHAWHSLHLFSPAGWSSIPGWPMPASQGPYPARAEVLA 80 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH--SSCCEEEECCSSSSSGGGGGSCTTCBCSSCGGGSCCSSSCCCCCSSSSCBHHHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHH--CCCCEEEEECCCCCCCcccCCCCCcEecCchhhhhCCCCCCCCCccCCCCHHHHHH
Confidence 3699999999999999999999 89999999999999988754210 11 112367778
Q ss_pred HHHHhhcCCCcEEEceEEEEE--------E-eeecccccccCEEEEeeCCCC-CCCCCCCCCCC-C-Ceeeccccccccc
Q psy4525 71 TFTKTGDNPRVNFYGNICLGQ--------D-ISLGDLTNAYHAVVLTYGADN-DKKLNIPGEDG-K-NIISARSFVGWYN 138 (388)
Q Consensus 71 ~~~~~~~~~~i~~~~~~~v~~--------~-~~~~~~~~~yd~lvlAtG~~~-~~~~~i~g~~~-~-~v~~~~~~~~~~~ 138 (388)
++.+.+++.+++++.++.+.. . ++..+....||+||+|||+.+ ++.+++||.+. . .+++...+..
T Consensus 81 ~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~~~~d~vV~AtG~~~~~~~~~~~g~~~~~~~~~~~~~~~~--- 157 (357)
T 4a9w_A 81 YLAQYEQKYALPVLRPIRVQRVSHFGERLRVVARDGRQWLARAVISATGTWGEAYTPEYQGLESFAGIQLHSAHYST--- 157 (357)
T ss_dssp HHHHHHHHTTCCEECSCCEEEEEEETTEEEEEETTSCEEEEEEEEECCCSGGGBCCCCCTTGGGCCSEEEEGGGCCC---
T ss_pred HHHHHHHHcCCEEEcCCEEEEEEECCCcEEEEEeCCCEEEeCEEEECCCCCCCCCCCCCCCccccCCcEEEeccCCC---
Confidence 888888888998888765532 1 333444458999999999633 23567887542 1 2233222221
Q ss_pred CCCCccccCcCCCCCeEEEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecCcc
Q psy4525 139 GLPEDASLDLSLDCEEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRGAL 208 (388)
Q Consensus 139 ~~~~~~~~~~~~~~~~vvVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~~~ 208 (388)
.....+++|+|||+|.+|+|+|..|+ +.+ +|+++.|+...
T Consensus 158 --------~~~~~~~~v~VvG~G~~g~e~a~~l~--------------------~~~--~v~~v~~~~~~ 197 (357)
T 4a9w_A 158 --------PAPFAGMRVAIIGGGNSGAQILAEVS--------------------TVA--ETTWITQHEPA 197 (357)
T ss_dssp --------SGGGTTSEEEEECCSHHHHHHHHHHT--------------------TTS--EEEEECSSCCC
T ss_pred --------hhhcCCCEEEEECCCcCHHHHHHHHH--------------------hhC--CEEEEECCCCe
Confidence 22345799999999999999999886 222 59999998543
No 77
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=99.90 E-value=1.5e-23 Score=207.83 Aligned_cols=251 Identities=15% Similarity=0.153 Sum_probs=162.2
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCC----CCCCcchhHHHHHHHHhh-cCCCcEEEceE
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGV----APDHPEVKNVINTFTKTG-DNPRVNFYGNI 87 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~----~p~~~~~~~~~~~~~~~~-~~~~i~~~~~~ 87 (388)
+++|+|||||+||+++|..|++...+.+|+|||+++..++. .++. .......+++..+..+.+ +..+++++.+.
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gv~~~~~~ 114 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYA-QCGLPYVISGAIASTEKLIARNVKTFRDKYGIDAKVRH 114 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBC-GGGHHHHHTTSSSCGGGGBSSCHHHHHHTTCCEEESSE
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCC-CCCcchhhcCCcCCHHHhhhcCHHHHHhhcCCEEEeCC
Confidence 46999999999999999999985458999999998765421 1111 001111222222222223 45689988876
Q ss_pred EEEE------Eeeecc---c---ccccCEEEEeeCCCCCCCCCCCCCCCCCeeecccccccccCCCCccccCcCCCCCeE
Q psy4525 88 CLGQ------DISLGD---L---TNAYHAVVLTYGADNDKKLNIPGEDGKNIISARSFVGWYNGLPEDASLDLSLDCEEA 155 (388)
Q Consensus 88 ~v~~------~~~~~~---~---~~~yd~lvlAtG~~~~~~~~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~v 155 (388)
.+.. .+.+.. . ...||+||+|||+.+ +.|++||.+.+++++..++...... ........++++
T Consensus 115 ~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p-~~p~i~G~~~~~v~~~~~~~~~~~l----~~~~~~~~~~~v 189 (480)
T 3cgb_A 115 EVTKVDTEKKIVYAEHTKTKDVFEFSYDRLLIATGVRP-VMPEWEGRDLQGVHLLKTIPDAERI----LKTLETNKVEDV 189 (480)
T ss_dssp EEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEE-CCCCCBTTTSBTEECCSSHHHHHHH----HHHHHSSCCCEE
T ss_pred EEEEEECCCCEEEEEEcCCCceEEEEcCEEEECCCCcc-cCCCCCCccCCCEEEeCCHHHHHHH----HHHhhhcCCCeE
Confidence 5521 233321 2 248999999999987 5778999877778766544321100 000001247999
Q ss_pred EEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecCcccccCCHHHHHHHhcCCCceEEeccccc
Q psy4525 156 TILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRGALQVAFTIKEFREMTKLPHVQTVFRNEQL 235 (388)
Q Consensus 156 vVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~~~~~~~~~~el~~l~~~~~~~~~~~~~~~ 235 (388)
+|||+|++|+|+|..|. +.+ .+|+++.|.+.+...+. +++
T Consensus 190 vViGgG~~g~e~A~~l~--------------------~~g-~~Vtlv~~~~~~l~~~~-~~~------------------ 229 (480)
T 3cgb_A 190 TIIGGGAIGLEMAETFV--------------------ELG-KKVRMIERNDHIGTIYD-GDM------------------ 229 (480)
T ss_dssp EEECCHHHHHHHHHHHH--------------------HTT-CEEEEECCGGGTTSSSC-HHH------------------
T ss_pred EEECCCHHHHHHHHHHH--------------------hcC-CeEEEEEeCCchhhcCC-HHH------------------
Confidence 99999999999999776 233 57999999876533221 111
Q ss_pred ccchhhhccccchhhHHHHHHHhhCCCCCCCCCCceeEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEecce
Q psy4525 236 CGVHEASATLARPRKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPSGI 315 (388)
Q Consensus 236 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~ 315 (388)
.+.+.+.+. +.||++++++.++++..+ +.+..+.. ++ .+++||.
T Consensus 230 -------------~~~l~~~l~------------~~Gv~i~~~~~v~~i~~~--~~v~~v~~--------~~-~~i~~D~ 273 (480)
T 3cgb_A 230 -------------AEYIYKEAD------------KHHIEILTNENVKAFKGN--ERVEAVET--------DK-GTYKADL 273 (480)
T ss_dssp -------------HHHHHHHHH------------HTTCEEECSCCEEEEEES--SBEEEEEE--------TT-EEEECSE
T ss_pred -------------HHHHHHHHH------------HcCcEEEcCCEEEEEEcC--CcEEEEEE--------CC-CEEEcCE
Confidence 122222222 579999999999999853 44544432 22 4799999
Q ss_pred EEEccccCCccC---CCCCcccCCCccccCCCC
Q psy4525 316 AFRSIGYQSRCV---DSDIPFNEKSCTVIPKEG 345 (388)
Q Consensus 316 Vi~a~G~~p~~~---~~~l~~~~~~gi~l~~~~ 345 (388)
||+|+|++|++. ..++++++++++.+|+..
T Consensus 274 vi~a~G~~p~~~~l~~~g~~~~~~G~I~Vd~~~ 306 (480)
T 3cgb_A 274 VLVSVGVKPNTDFLEGTNIRTNHKGAIEVNAYM 306 (480)
T ss_dssp EEECSCEEESCGGGTTSCCCBCTTSCBCCCTTS
T ss_pred EEECcCCCcChHHHHhCCcccCCCCCEEECCCc
Confidence 999999999863 245677766778887653
No 78
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=99.90 E-value=6.1e-23 Score=196.19 Aligned_cols=226 Identities=17% Similarity=0.151 Sum_probs=143.7
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCC-cEEEEcCCCCCCCceee-----------------CCC------C--------
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQS-TVDIYEKLPVPFGLVRY-----------------GVA------P-------- 60 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~-~v~lie~~~~~gg~~~~-----------------g~~------p-------- 60 (388)
.++|+|||||+||+++|..|++ .|. +|+|||+.+ +||.|.+ ++. +
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~--~g~~~v~lie~~~-~Gg~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 80 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKD--FGITDVIILEKGT-VGHSFKHWPKSTRTITPSFTSNGFGMPDMNAISMDTSPAFTF 80 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH--TTCCCEEEECSSS-TTHHHHTSCTTCBCSSCCCCCGGGTCCCTTCSSTTCCHHHHH
T ss_pred cCcEEEECcCHHHHHHHHHHHH--cCCCcEEEEecCC-CCCccccCcccccccCcchhcccCCchhhhhccccccccccc
Confidence 4699999999999999999999 898 999999997 7776521 110 0
Q ss_pred --CCcchhHHHHHHHHhhcCCCcEEEceEEEE-E-------EeeecccccccCEEEEeeCCCCCCCCCCCCCCCCCeeec
Q psy4525 61 --DHPEVKNVINTFTKTGDNPRVNFYGNICLG-Q-------DISLGDLTNAYHAVVLTYGADNDKKLNIPGEDGKNIISA 130 (388)
Q Consensus 61 --~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~-~-------~~~~~~~~~~yd~lvlAtG~~~~~~~~i~g~~~~~v~~~ 130 (388)
.+....++..++.+++++.+++++.++.+. . .+...+....||+||+|||+.+. +.+|+ ..+++.
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~d~vVlAtG~~~~--p~ip~---~~~~~~ 155 (369)
T 3d1c_A 81 NEEHISGETYAEYLQVVANHYELNIFENTVVTNISADDAYYTIATTTETYHADYIFVATGDYNF--PKKPF---KYGIHY 155 (369)
T ss_dssp CCSSCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSCCEEEEEEEECCCSTTS--BCCCS---SSCEEG
T ss_pred cccCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCeEEEEeCCCEEEeCEEEECCCCCCc--cCCCC---Cceech
Confidence 011234566667777777899988876542 1 13333334579999999998762 45665 344544
Q ss_pred ccccccccCCCCccccCcCCCCCeEEEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecCcccc
Q psy4525 131 RSFVGWYNGLPEDASLDLSLDCEEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRGALQV 210 (388)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~vvVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~~~~~ 210 (388)
.++.. ....++++|+|||+|.+|+|+|..|. +.+ .+|+++.|++.+..
T Consensus 156 ~~~~~-----------~~~~~~~~vvVvG~G~~g~e~a~~l~--------------------~~g-~~V~lv~~~~~~~~ 203 (369)
T 3d1c_A 156 SEIED-----------FDNFNKGQYVVIGGNESGFDAAYQLA--------------------KNG-SDIALYTSTTGLND 203 (369)
T ss_dssp GGCSC-----------GGGSCSSEEEEECCSHHHHHHHHHHH--------------------HTT-CEEEEECC------
T ss_pred hhcCC-----------hhhcCCCEEEEECCCcCHHHHHHHHH--------------------hcC-CeEEEEecCCCCCC
Confidence 43321 11235789999999999999999886 233 57999999876542
Q ss_pred cCCHHHHHHHhcCCCceEEecccccccchhhhccc-cchhhHHHHHHHhhCCCCCCCCCCcee-EEEEecCcceeeeeCC
Q psy4525 211 AFTIKEFREMTKLPHVQTVFRNEQLCGVHEASATL-ARPRKRLTELILKTSNPDESKSNCSKY-FRPIFLRSPTEFKLND 288 (388)
Q Consensus 211 ~~~~~el~~l~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~g-v~~~~~~~~~~i~~~~ 288 (388)
+.. +++. .+ +...+++.+.+. +.| |+++++..+.++..++
T Consensus 204 ~~~-----------------d~~~---------~~~~~~~~~l~~~l~------------~~g~v~~~~~~~v~~i~~~~ 245 (369)
T 3d1c_A 204 PDA-----------------DPSV---------RLSPYTRQRLGNVIK------------QGARIEMNVHYTVKDIDFNN 245 (369)
T ss_dssp ---------------------CTT---------SCCHHHHHHHHHHHH------------TTCCEEEECSCCEEEEEEET
T ss_pred CCC-----------------CCCc---------cCCHHHHHHHHHHHh------------hCCcEEEecCcEEEEEEecC
Confidence 200 0000 00 112233333332 565 9999999999996433
Q ss_pred CCceeEEEEccCccccCCceeEE-ecceEEEccccCCcc
Q psy4525 289 NGAITGINFANQQALVTEDTELI-PSGIAFRSIGYQSRC 326 (388)
Q Consensus 289 ~~~v~~v~~~~~~~~~~~~~~~l-~~D~Vi~a~G~~p~~ 326 (388)
+ ...+.+. +++++ .+|.||+|+|++|+.
T Consensus 246 -~-~~~v~~~--------~g~~~~~~d~vi~a~G~~~~~ 274 (369)
T 3d1c_A 246 -G-QYHISFD--------SGQSVHTPHEPILATGFDATK 274 (369)
T ss_dssp -T-EEEEEES--------SSCCEEESSCCEECCCBCGGG
T ss_pred -C-ceEEEec--------CCeEeccCCceEEeeccCCcc
Confidence 2 2234432 23334 579999999999997
No 79
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=99.90 E-value=1.8e-24 Score=215.00 Aligned_cols=288 Identities=15% Similarity=0.120 Sum_probs=161.8
Q ss_pred CCCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCC-CceeeCCCCCCcchhHHHHHHHHh--hcCCCcEEEceE
Q psy4525 11 QLKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPF-GLVRYGVAPDHPEVKNVINTFTKT--GDNPRVNFYGNI 87 (388)
Q Consensus 11 ~~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~g-g~~~~g~~p~~~~~~~~~~~~~~~--~~~~~i~~~~~~ 87 (388)
..+++|||||||+||+++|..|++ .+++|+|||+++++. -.+.|.+.-......++...+... ..+.+++|+...
T Consensus 40 ~~KprVVIIGgG~AGl~~A~~L~~--~~~~VtLId~~~~~~~~PlL~~va~G~l~~~~i~~p~~~~~~~~~~~v~~~~~~ 117 (502)
T 4g6h_A 40 SDKPNVLILGSGWGAISFLKHIDT--KKYNVSIISPRSYFLFTPLLPSAPVGTVDEKSIIEPIVNFALKKKGNVTYYEAE 117 (502)
T ss_dssp CSSCEEEEECSSHHHHHHHHHSCT--TTCEEEEEESSSEEECGGGGGGTTTTSSCGGGGEEEHHHHHTTCSSCEEEEEEE
T ss_pred CCCCCEEEECCcHHHHHHHHHhhh--CCCcEEEECCCCCcccccchhHHhhccccHHHhhhhHHHHHHhhcCCeEEEEEE
Confidence 346799999999999999999998 899999999986531 111121111111222222222222 234578887665
Q ss_pred EEEEE-----eeec---------------------ccccccCEEEEeeCCCCCCCCCCCCCCCCCeeeccccc------c
Q psy4525 88 CLGQD-----ISLG---------------------DLTNAYHAVVLTYGADNDKKLNIPGEDGKNIISARSFV------G 135 (388)
Q Consensus 88 ~v~~~-----~~~~---------------------~~~~~yd~lvlAtG~~~~~~~~i~g~~~~~v~~~~~~~------~ 135 (388)
....+ +++. ..+..||+||||||+.+ +.+++||.+ ++.+...++. .
T Consensus 118 v~~ID~~~k~V~l~~~~~~~~~~~~~~~~~~~~~~~~~i~YD~LViAtGs~~-~~~~ipG~~-e~a~~l~t~~dA~~ir~ 195 (502)
T 4g6h_A 118 ATSINPDRNTVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGAEP-NTFGIPGVT-DYGHFLKEIPNSLEIRR 195 (502)
T ss_dssp EEEEEGGGTEEEEEEEEEEEECSSSCCCCCCCTTCCEEEECSEEEECCCCEE-CCTTCTTHH-HHCEECSSHHHHHHHHH
T ss_pred EEEEEhhhCEEEEeecccceeecccccccccccCCceEEeCCEEEEcCCccc-ccCCccCcc-cccCCCCCHHHHHHHHH
Confidence 54332 2211 11237999999999998 588899853 1222221111 1
Q ss_pred cccCCCCcccc-C----cCCCCCeEEEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecCcccc
Q psy4525 136 WYNGLPEDASL-D----LSLDCEEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRGALQV 210 (388)
Q Consensus 136 ~~~~~~~~~~~-~----~~~~~~~vvVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~~~~~ 210 (388)
.+......... . ......+++|||||++|+|+|.+|+....+.-....+ .+. ...+|+++++.+.+..
T Consensus 196 ~l~~~~e~a~~~~~~~~~~~~~~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~-----~~~--~~~~V~lve~~~~il~ 268 (502)
T 4g6h_A 196 TFAANLEKANLLPKGDPERRRLLSIVVVGGGPTGVEAAGELQDYVHQDLRKFLP-----ALA--EEVQIHLVEALPIVLN 268 (502)
T ss_dssp HHHHHHHHHHHSCTTCHHHHHHTEEEEECCSHHHHHHHHHHHHHHHHTHHHHCH-----HHH--HHCEEEEECSSSSSST
T ss_pred HHHHHHHHHhcccccchhhccccceEEECCCcchhhhHHHHHHHHHHHHHhhcc-----ccc--ccceeEEecccccccc
Confidence 10000000000 0 0011257999999999999999886111000000000 000 1147999999987654
Q ss_pred cCCHHHHHHHhcCCCceEEecccccccchhhhccccchhhHHHHHHHhhCCCCCCCCCCceeEEEEecCcceeeeeCCCC
Q psy4525 211 AFTIKEFREMTKLPHVQTVFRNEQLCGVHEASATLARPRKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTEFKLNDNG 290 (388)
Q Consensus 211 ~~~~~el~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~ 290 (388)
.+. ++++ +.+.+.|. +.||++++++.++++.. ++
T Consensus 269 ~~~-~~~~-------------------------------~~~~~~L~------------~~GV~v~~~~~v~~v~~--~~ 302 (502)
T 4g6h_A 269 MFE-KKLS-------------------------------SYAQSHLE------------NTSIKVHLRTAVAKVEE--KQ 302 (502)
T ss_dssp TSC-HHHH-------------------------------HHHHHHHH------------HTTCEEETTEEEEEECS--SE
T ss_pred CCC-HHHH-------------------------------HHHHHHHH------------hcceeeecCceEEEEeC--Cc
Confidence 433 2222 22223332 68999999999999973 33
Q ss_pred ceeEEEEccCccccCCceeEEecceEEEccccCCccCC------CCCcccCCCccccCCCCCCeecchhhHHhHH
Q psy4525 291 AITGINFANQQALVTEDTELIPSGIAFRSIGYQSRCVD------SDIPFNEKSCTVIPKEGVPVVTWEGWKAIDK 359 (388)
Q Consensus 291 ~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~p~~~~------~~l~~~~~~gi~l~~~~~~~~~~~~w~~~~~ 359 (388)
.+......++ ...+++++||+||||+|++||+.. .+...+.++++.+|+.-...-..+.|...|+
T Consensus 303 ~~~~~~~~dg----~~~~~~i~ad~viwa~Gv~~~~~~~~l~~~~~~~~~~~g~I~Vd~~lq~~~~~~IfAiGD~ 373 (502)
T 4g6h_A 303 LLAKTKHEDG----KITEETIPYGTLIWATGNKARPVITDLFKKIPEQNSSKRGLAVNDFLQVKGSNNIFAIGDN 373 (502)
T ss_dssp EEEEEECTTS----CEEEEEEECSEEEECCCEECCHHHHHHHHHSGGGTTCCSSEEBCTTSBBTTCSSEEECGGG
T ss_pred eEEEEEecCc----ccceeeeccCEEEEccCCcCCHHHHhHHHhccccccCCCceeECCccccCCCCCEEEEEcc
Confidence 3344433332 123468999999999999998531 2334456677888865322112345555553
No 80
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.90 E-value=2.8e-23 Score=214.44 Aligned_cols=227 Identities=13% Similarity=0.086 Sum_probs=167.2
Q ss_pred CCCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceee-CCCCCCcchhHHHHHHHHhhcCC-CcEEEceEE
Q psy4525 11 QLKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRY-GVAPDHPEVKNVINTFTKTGDNP-RVNFYGNIC 88 (388)
Q Consensus 11 ~~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~-g~~p~~~~~~~~~~~~~~~~~~~-~i~~~~~~~ 88 (388)
..+++|+||||||||+++|..|++ .|++|+|||+.+.+||.+.+ ...|......++..++...+.+. +++++.++.
T Consensus 389 ~~~~~VvIIGgG~AGl~aA~~La~--~G~~V~liE~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~gv~~~~~~~ 466 (690)
T 3k30_A 389 ESDARVLVVGAGPSGLEAARALGV--RGYDVVLAEAGRDLGGRVTQESALPGLSAWGRVKEYREAVLAELPNVEIYRESP 466 (690)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHH--HTCEEEEECSSSSSCTHHHHHHTSTTCGGGGHHHHHHHHHHHTCTTEEEESSCC
T ss_pred cccceEEEECCCHHHHHHHHHHHH--CCCeEEEEecCCCCCCEeeeccCCCchhHHHHHHHHHHHHHHHcCCCEEEECCe
Confidence 356899999999999999999999 79999999999999998854 33477777788888888888887 899888765
Q ss_pred EEEEeeeccc-ccccCEEEEeeCCCC-------CCCCCCCCCCCCCeeecccccccccCCCCccccCcCCCCCeEEEEc-
Q psy4525 89 LGQDISLGDL-TNAYHAVVLTYGADN-------DKKLNIPGEDGKNIISARSFVGWYNGLPEDASLDLSLDCEEATILG- 159 (388)
Q Consensus 89 v~~~~~~~~~-~~~yd~lvlAtG~~~-------~~~~~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVIG- 159 (388)
+ +.++. ...||+||+|||+.+ +..+++||.+.+++++..++... ....+++|+|||
T Consensus 467 v----~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~~~~i~G~~~~~v~~~~~~l~~-----------~~~~g~~VvViG~ 531 (690)
T 3k30_A 467 M----TGDDIVEFGFEHVITATGATWRTDGVARFHTTALPIAEGMQVLGPDDLFAG-----------RLPDGKKVVVYDD 531 (690)
T ss_dssp C----CHHHHHHTTCCEEEECCCEEECSSCCSSSCSSCCCBCTTSEEECHHHHHTT-----------CCCSSSEEEEEEC
T ss_pred e----cHHHHhhcCCCEEEEcCCCccccccccccCCCCCCCCCCCcEEcHHHHhCC-----------CCCCCCEEEEEcC
Confidence 4 22332 347999999999874 13568888887788877766521 123478999999
Q ss_pred -CChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecCcccccCCHHHHHHHhcCCCceEEecccccccc
Q psy4525 160 -QGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRGALQVAFTIKEFREMTKLPHVQTVFRNEQLCGV 238 (388)
Q Consensus 160 -gG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~~~~~~~~~~el~~l~~~~~~~~~~~~~~~~~~ 238 (388)
+|.+|+|+|..|. ..+ .+|+++.+.+.+.....+
T Consensus 532 ggG~~g~e~A~~L~--------------------~~g-~~Vtlv~~~~~l~~~~~~------------------------ 566 (690)
T 3k30_A 532 DHYYLGGVVAELLA--------------------QKG-YEVSIVTPGAQVSSWTNN------------------------ 566 (690)
T ss_dssp SCSSHHHHHHHHHH--------------------HTT-CEEEEEESSSSTTGGGGG------------------------
T ss_pred CCCccHHHHHHHHH--------------------hCC-CeeEEEeccccccccccc------------------------
Confidence 9999999999886 233 579999988764321100
Q ss_pred hhhhccccchhhHHHHHHHhhCCCCCCCCCCceeEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEecceEEE
Q psy4525 239 HEASATLARPRKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPSGIAFR 318 (388)
Q Consensus 239 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~ 318 (388)
+.....+.+.+. +.||++++++.++++..+ + ..+.. +.++++++++||.||+
T Consensus 567 -------~~~~~~l~~~l~------------~~GV~i~~~~~V~~i~~~--~--~~v~~-----~~~~~~~~i~aD~VV~ 618 (690)
T 3k30_A 567 -------TFEVNRIQRRLI------------ENGVARVTDHAVVAVGAG--G--VTVRD-----TYASIERELECDAVVM 618 (690)
T ss_dssp -------GTCHHHHHHHHH------------HTTCEEEESEEEEEEETT--E--EEEEE-----TTTCCEEEEECSEEEE
T ss_pred -------chhHHHHHHHHH------------HCCCEEEcCcEEEEEECC--e--EEEEE-----ccCCeEEEEECCEEEE
Confidence 001122223332 579999999999999742 2 12221 1256778999999999
Q ss_pred ccccCCccC
Q psy4525 319 SIGYQSRCV 327 (388)
Q Consensus 319 a~G~~p~~~ 327 (388)
|+|++|+..
T Consensus 619 A~G~~p~~~ 627 (690)
T 3k30_A 619 VTARLPREE 627 (690)
T ss_dssp ESCEEECCH
T ss_pred CCCCCCChH
Confidence 999999873
No 81
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.89 E-value=1.3e-22 Score=208.99 Aligned_cols=143 Identities=20% Similarity=0.269 Sum_probs=113.5
Q ss_pred CCCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceee-CCCCCCcchhHHHHHHHHhhcCCCcEEEceEEE
Q psy4525 11 QLKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRY-GVAPDHPEVKNVINTFTKTGDNPRVNFYGNICL 89 (388)
Q Consensus 11 ~~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~-g~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v 89 (388)
..+++|+||||||||+++|..|++ .|++|+|||+++.+||.+.+ ...|......++..++.+++++.+++++.++.+
T Consensus 371 ~~~~~vvIIGgG~AGl~aA~~l~~--~g~~V~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v 448 (671)
T 1ps9_A 371 VQKKNLAVVGAGPAGLAFAINAAA--RGHQVTLFDAHSEIGGQFNIAKQIPGKEEFYETLRYYRRMIEVTGVTLKLNHTV 448 (671)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHT--TTCEEEEEESSSSSCTTHHHHTTSTTCTTHHHHHHHHHHHHHHHTCEEEESCCC
T ss_pred CCCCeEEEECCCHHHHHHHHHHHh--CCCeEEEEeCCCCCCCeeeccccCCCHHHHHHHHHHHHHHHHHcCCEEEeCcEe
Confidence 346899999999999999999999 89999999999999998754 344665555666677777777789999887754
Q ss_pred EEEeeeccccc-ccCEEEEeeCCCCCCCCCCCCCCCCCeeecccccccccCCCCccccCcCCCCCeEEEEcCChHHHHHH
Q psy4525 90 GQDISLGDLTN-AYHAVVLTYGADNDKKLNIPGEDGKNIISARSFVGWYNGLPEDASLDLSLDCEEATILGQGNVAMDVA 168 (388)
Q Consensus 90 ~~~~~~~~~~~-~yd~lvlAtG~~~~~~~~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVIGgG~sg~e~a 168 (388)
.. . .. .||+||+|||+.+ +.+++||.+.+++++..+++. .....+++|+|||||++|+|+|
T Consensus 449 ~~----~--~~~~~d~lviAtG~~p-~~~~i~G~~~~~v~~~~~~l~-----------~~~~~~~~VvVIGgG~~g~E~A 510 (671)
T 1ps9_A 449 TA----D--QLQAFDETILASGIVP-RTPPIDGIDHPKVLSYLDVLR-----------DKAPVGNKVAIIGCGGIGFDTA 510 (671)
T ss_dssp CS----S--SSCCSSEEEECCCEEE-CCCCCBTTTSTTEEEHHHHHT-----------SCCCCCSEEEEECCHHHHHHHH
T ss_pred cH----H--HhhcCCEEEEccCCCc-CCCCCCCCCCCcEeeHHHHhh-----------CCCCCCCeEEEECCChhHHHHH
Confidence 21 1 23 7999999999987 578899987778887665542 1123579999999999999999
Q ss_pred HHhcc
Q psy4525 169 RILLS 173 (388)
Q Consensus 169 ~~L~~ 173 (388)
..|++
T Consensus 511 ~~l~~ 515 (671)
T 1ps9_A 511 MYLSQ 515 (671)
T ss_dssp HHHTC
T ss_pred HHHHh
Confidence 99973
No 82
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=99.88 E-value=2.2e-22 Score=214.21 Aligned_cols=228 Identities=15% Similarity=0.170 Sum_probs=160.9
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeC---CCCCCcchhHHHHHHHHhhcC-CCcEEEceEE
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYG---VAPDHPEVKNVINTFTKTGDN-PRVNFYGNIC 88 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g---~~p~~~~~~~~~~~~~~~~~~-~~i~~~~~~~ 88 (388)
.++|+||||||||++||..|++ .|++|+|||+++.+||.+.+. ..+. ....++...+.+.+.+ .+++++.++.
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~--~G~~V~lie~~~~~GG~~~~~~k~~i~~-~~~~~~~~~~~~~l~~~~~v~~~~~~~ 204 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASR--SGARVMLLDERAEAGGTLLDTAGEQIDG-MDSSAWIEQVTSELAEAEETTHLQRTT 204 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSSSGGGGGSSCCEETT-EEHHHHHHHHHHHHHHSTTEEEESSEE
T ss_pred CCCEEEECCCHHHHHHHHHHHh--CCCcEEEEeCCCCCCceeccCCccccCC-CCHHHHHHHHHHHHhhcCCcEEEeCCE
Confidence 4689999999999999999999 899999999999999888641 1111 1234444554444544 4888888766
Q ss_pred EEEE---------------eee--------ccc-ccccCEEEEeeCCCCCCCCCCCCCCCCCeeecccccccccCCCCcc
Q psy4525 89 LGQD---------------ISL--------GDL-TNAYHAVVLTYGADNDKKLNIPGEDGKNIISARSFVGWYNGLPEDA 144 (388)
Q Consensus 89 v~~~---------------~~~--------~~~-~~~yd~lvlAtG~~~~~~~~i~g~~~~~v~~~~~~~~~~~~~~~~~ 144 (388)
+... +.+ ... ...||+||||||+.+ +.+++||.+.++++++..+...++..
T Consensus 205 V~~i~~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs~p-~~~~ipG~~~~gv~~~~~~~~~l~~~---- 279 (965)
T 2gag_A 205 VFGSYDANYLIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATGAHE-RPIVFENNDRPGIMLAGAVRSYLNRY---- 279 (965)
T ss_dssp EEEEETTTEEEEEEECSTTCSSCCCTTCCSEEEEEEEEEEEEECCCEEE-CCCCCBTCCSTTEEEHHHHHHHHHTT----
T ss_pred EEeeecCCceeeeEeecccccccccccCCCCceEEEECCEEEECCCCcc-CCCCCCCCCCCCEEEhHHHHHHHHhc----
Confidence 5321 011 111 237999999999987 57889999999999887664333221
Q ss_pred ccCcCCCCCeEEEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecCcccccCCHHHHHHHhcCC
Q psy4525 145 SLDLSLDCEEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRGALQVAFTIKEFREMTKLP 224 (388)
Q Consensus 145 ~~~~~~~~~~vvVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~~~~~~~~~~el~~l~~~~ 224 (388)
....+++|+|||+|++|+|+|..|. +.+. +|+++++++.+...
T Consensus 280 ---~~~~gk~vvViGgG~~g~E~A~~L~--------------------~~G~-~Vtvv~~~~~~~~~------------- 322 (965)
T 2gag_A 280 ---GVRAGARIAVATTNDSAYELVRELA--------------------ATGG-VVAVIDARSSISAA------------- 322 (965)
T ss_dssp ---CEESCSSEEEEESSTTHHHHHHHHG--------------------GGTC-CSEEEESCSSCCHH-------------
T ss_pred ---CCCCCCeEEEEcCCHHHHHHHHHHH--------------------HcCC-cEEEEECCCccchh-------------
Confidence 1124689999999999999999876 2444 49999988654210
Q ss_pred CceEEecccccccchhhhccccchhhHHHHHHHhhCCCCCCCCCCceeEEEEecCcceeeeeCCCCceeEEEEcc--Ccc
Q psy4525 225 HVQTVFRNEQLCGVHEASATLARPRKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTEFKLNDNGAITGINFAN--QQA 302 (388)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~--~~~ 302 (388)
.+.+ .+.||+++++..++++..++++++..+.+.+ ...
T Consensus 323 ----------------------------~~~l------------~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~~~~~~ 362 (965)
T 2gag_A 323 ----------------------------AAQA------------VADGVQVISGSVVVDTEADENGELSAIVVAELDEAR 362 (965)
T ss_dssp ----------------------------HHHH------------HHTTCCEEETEEEEEEEECTTSCEEEEEEEEECTTC
T ss_pred ----------------------------HHHH------------HhCCeEEEeCCEeEEEeccCCCCEEEEEEEeccccC
Confidence 0111 1579999999999999863246777777643 000
Q ss_pred ccCCceeEEecceEEEccccCCcc
Q psy4525 303 LVTEDTELIPSGIAFRSIGYQSRC 326 (388)
Q Consensus 303 ~~~~~~~~l~~D~Vi~a~G~~p~~ 326 (388)
..++.++++||.||+|+|++||+
T Consensus 363 -~~G~~~~i~~D~Vv~a~G~~P~~ 385 (965)
T 2gag_A 363 -ELGGTQRFEADVLAVAGGFNPVV 385 (965)
T ss_dssp -CEEEEEEEECSEEEEECCEEECC
T ss_pred -CCCceEEEEcCEEEECCCcCcCh
Confidence 01223789999999999999987
No 83
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=99.88 E-value=2.6e-22 Score=204.24 Aligned_cols=248 Identities=14% Similarity=0.204 Sum_probs=150.0
Q ss_pred CCCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCC-C-------CCCCce-eeCCCCCC-------------------
Q psy4525 11 QLKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKL-P-------VPFGLV-RYGVAPDH------------------- 62 (388)
Q Consensus 11 ~~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~-~-------~~gg~~-~~g~~p~~------------------- 62 (388)
...+||+||||||||++||..|++ .|.+|+|||+. + .+||.| +.++.|.+
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~--~g~~v~liE~~~~~~~g~~~~~GG~~~~~g~iP~~~l~~~~~~~~~~~~~~~~g 182 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAK--YGAKTAVLDYVEPTPIGTTWGLGGTCVNVGCIPKKLMHQAGLLSHALEDAEHFG 182 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHH--TTCCEEEECCCCCCTTCCCCCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred cccccEEEECCCccHHHHHHHHHh--CCCeEEEEeccCCcccccccccCceEeccCCCchHHHHHHHHHHHHHhhHHhCC
Confidence 346899999999999999999999 89999999973 2 367754 22322211
Q ss_pred ---------cchhHHHHHHH-----------HhhcCCCcEEEceEEEEE---Eeee--ccc---ccccCEEEEeeCCCCC
Q psy4525 63 ---------PEVKNVINTFT-----------KTGDNPRVNFYGNICLGQ---DISL--GDL---TNAYHAVVLTYGADND 114 (388)
Q Consensus 63 ---------~~~~~~~~~~~-----------~~~~~~~i~~~~~~~v~~---~~~~--~~~---~~~yd~lvlAtG~~~~ 114 (388)
....++.++.. ..+...+++++.+..... .+.+ .++ ...||+||||||+.+
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~~~~~~~~~~v~v~~~~g~~~~~~~d~lviAtGs~p- 261 (598)
T 2x8g_A 183 WSLDRSKISHNWSTMVEGVQSHIGSLNWGYKVALRDNQVTYLNAKGRLISPHEVQITDKNQKVSTITGNKIILATGERP- 261 (598)
T ss_dssp CCCCGGGCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETTEEEEECTTCCEEEEEEEEEEECCCEEE-
T ss_pred ccccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHhhCCcEEEEEEEEEcCCCEEEEEeCCCCeEEEEeCEEEEeCCCCC-
Confidence 11222222221 223456788775432211 1222 222 247999999999987
Q ss_pred CCCCCCCCCCCCeeecccccccccCCCCccccCcCCCCCeEEEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcC
Q psy4525 115 KKLNIPGEDGKNIISARSFVGWYNGLPEDASLDLSLDCEEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTS 194 (388)
Q Consensus 115 ~~~~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~ 194 (388)
+.|++||.+. .+++..++. .....+++++|||||++|+|+|..|+ +.
T Consensus 262 ~~p~i~G~~~-~~~~~~~~~------------~~~~~~~~vvViGgG~~g~E~A~~l~--------------------~~ 308 (598)
T 2x8g_A 262 KYPEIPGAVE-YGITSDDLF------------SLPYFPGKTLVIGASYVALECAGFLA--------------------SL 308 (598)
T ss_dssp CCCSSTTHHH-HCEEHHHHT------------TCSSCCCSEEEECCSHHHHHHHHHHH--------------------HT
T ss_pred CCCCCCCccc-ceEcHHHHh------------hCccCCCEEEEECCCHHHHHHHHHHH--------------------Hc
Confidence 5778888542 223333332 11224678999999999999999886 23
Q ss_pred CCcEEEEEeecCcccccCCHHHHHHHhcCCCceEEecccccccchhhhccccchhhHHHHHHHhhCCCCCCCCCCceeEE
Q psy4525 195 RIKSVNLVGRRGALQVAFTIKEFREMTKLPHVQTVFRNEQLCGVHEASATLARPRKRLTELILKTSNPDESKSNCSKYFR 274 (388)
Q Consensus 195 ~~~~V~~i~r~~~~~~~~~~~el~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~ 274 (388)
+ .+||++.|+ .+...+. +++. +.+.+.+. +.||+
T Consensus 309 g-~~Vtlv~~~-~~l~~~d-~~~~-------------------------------~~~~~~l~------------~~gv~ 342 (598)
T 2x8g_A 309 G-GDVTVMVRS-ILLRGFD-QQMA-------------------------------EKVGDYME------------NHGVK 342 (598)
T ss_dssp T-CCEEEEESS-CSSTTSC-HHHH-------------------------------HHHHHHHH------------HTTCE
T ss_pred C-CEEEEEECC-cCcCcCC-HHHH-------------------------------HHHHHHHH------------hCCCE
Confidence 4 469999987 3322211 2211 12222222 57899
Q ss_pred EEecCcceeeeeC-----CC---CceeEEEEccCccccCCceeEEecceEEEccccCCccCC-----CCCcccCCCcccc
Q psy4525 275 PIFLRSPTEFKLN-----DN---GAITGINFANQQALVTEDTELIPSGIAFRSIGYQSRCVD-----SDIPFNEKSCTVI 341 (388)
Q Consensus 275 ~~~~~~~~~i~~~-----~~---~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~p~~~~-----~~l~~~~~~gi~l 341 (388)
++++..++++... .+ +.+ .+.+.. ..++..++++|.||+|+|++||+.. .++++++++++.+
T Consensus 343 i~~~~~v~~v~~~~~~~~~~~~~~~~-~v~~~~----~~g~~~~~~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~v 417 (598)
T 2x8g_A 343 FAKLCVPDEIKQLKVVDTENNKPGLL-LVKGHY----TDGKKFEEEFETVIFAVGREPQLSKVLCETVGVKLDKNGRVVC 417 (598)
T ss_dssp EEETEEEEEEEEEECCBTTTTBCCEE-EEEEEE----TTSCEEEEEESEEEECSCEEECGGGTBCGGGCCCBCTTSCBCC
T ss_pred EEECCeEEEEEeccccccccCCCceE-EEEEEe----CCCcEEeccCCEEEEEeCCccccCccCchhcCceECCCCcEEe
Confidence 9999888877531 11 222 122110 1222234569999999999999731 3566766666877
Q ss_pred CCCC
Q psy4525 342 PKEG 345 (388)
Q Consensus 342 ~~~~ 345 (388)
|+..
T Consensus 418 d~~~ 421 (598)
T 2x8g_A 418 TDDE 421 (598)
T ss_dssp CTTS
T ss_pred CCCC
Confidence 7653
No 84
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.88 E-value=1.2e-22 Score=210.57 Aligned_cols=230 Identities=16% Similarity=0.104 Sum_probs=152.9
Q ss_pred CCCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceee-CCCCCCcchhHHHHHHHHhhcC------CCcEE
Q psy4525 11 QLKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRY-GVAPDHPEVKNVINTFTKTGDN------PRVNF 83 (388)
Q Consensus 11 ~~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~-g~~p~~~~~~~~~~~~~~~~~~------~~i~~ 83 (388)
...++|+||||||||++||..|++ .|++|+|||+.+.+||.+.+ ...|.......+.+++...++. .++++
T Consensus 387 ~~~~~VvIIGgGpAGl~aA~~L~~--~G~~Vtlie~~~~~GG~~~~~~~~pg~~~~~~~~~~~~~~i~~~~~~~~~~v~i 464 (729)
T 1o94_A 387 KNKDSVLIVGAGPSGSEAARVLME--SGYTVHLTDTAEKIGGHLNQVAALPGLGEWSYHRDYRETQITKLLKKNKESQLA 464 (729)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSTTTTHHHHTTSTTCGGGHHHHHHHHHHHHHHHHHSTTCEEE
T ss_pred cCCceEEEECCCHHHHHHHHHHHH--CCCeEEEEeCCCCcCCeeeecccCCChHHHHHHHHHHHHHHHHhhcccCCceEE
Confidence 446899999999999999999999 89999999999999998865 3335554444444444333322 25665
Q ss_pred EceEEEEEEeeeccc-ccccCEEEEeeCCCC-------CCCCCCCCCC--CCCeeecccccccccCCCCccccCcCCCCC
Q psy4525 84 YGNICLGQDISLGDL-TNAYHAVVLTYGADN-------DKKLNIPGED--GKNIISARSFVGWYNGLPEDASLDLSLDCE 153 (388)
Q Consensus 84 ~~~~~v~~~~~~~~~-~~~yd~lvlAtG~~~-------~~~~~i~g~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (388)
..+.. ++.++. ...||+||+|||+.+ ++.+++||.+ .+++++..+++.. ....++
T Consensus 465 ~~~~~----v~~~~~~~~~~d~vviAtG~~~~~~~~~~p~~~~ipG~~~~~~~v~~~~~~l~~-----------~~~~gk 529 (729)
T 1o94_A 465 LGQKP----MTADDVLQYGADKVIIATGARWNTDGTNCLTHDPIPGADASLPDQLTPEQVMDG-----------KKKIGK 529 (729)
T ss_dssp CSCCC----CCHHHHHTSCCSEEEECCCEEECSSCCCTTTSSCCTTCCTTSTTEECHHHHHHC-----------CSCCCS
T ss_pred EeCeE----EehhhccccCCCEEEEcCCCCcccccccCccCCCCCCccccCCCEEEHHHHhcC-----------CCCCCC
Confidence 54432 233333 347999999999873 2467889987 6788887776531 123478
Q ss_pred eEEEEc--CChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecCcccccCCHHHHHHHhcCCCceEEec
Q psy4525 154 EATILG--QGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRGALQVAFTIKEFREMTKLPHVQTVFR 231 (388)
Q Consensus 154 ~vvVIG--gG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~~~~~~~~~~el~~l~~~~~~~~~~~ 231 (388)
+|+||| ||++|+|+|..|+ +.+ .+||+++|++ +... .. +
T Consensus 530 ~VvVIG~GgG~~g~e~A~~l~--------------------~~G-~~Vtlv~~~~-l~~~---~~---~----------- 570 (729)
T 1o94_A 530 RVVILNADTYFMAPSLAEKLA--------------------TAG-HEVTIVSGVH-LANY---MH---F----------- 570 (729)
T ss_dssp EEEEEECCCSSHHHHHHHHHH--------------------HTT-CEEEEEESSC-TTHH---HH---H-----------
T ss_pred eEEEEcCCCCchHHHHHHHHH--------------------HcC-CEEEEEeccc-cccc---cc---c-----------
Confidence 999999 9999999999876 234 4799999987 3210 00 0
Q ss_pred ccccccchhhhccccchhhHHHHHHHhhCCCCCCCCCCceeEEEEecCcceeeeeCCCCceeEEEEc--cCcc-------
Q psy4525 232 NEQLCGVHEASATLARPRKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTEFKLNDNGAITGINFA--NQQA------- 302 (388)
Q Consensus 232 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~v~~v~~~--~~~~------- 302 (388)
+.....+.+.+. ++||++++++.++++.. ++ + .+... ++..
T Consensus 571 --------------~~~~~~~~~~l~------------~~GV~i~~~~~v~~i~~--~~-v-~~~~~~~~~~~~~~~~~~ 620 (729)
T 1o94_A 571 --------------TLEYPNMMRRLH------------ELHVEELGDHFCSRIEP--GR-M-EIYNIWGDGSKRTYRGPG 620 (729)
T ss_dssp --------------TTCHHHHHHHHH------------HTTCEEECSEEEEEEET--TE-E-EEEETTCSCSCCCCCCTT
T ss_pred --------------cccHHHHHHHHH------------hCCCEEEcCcEEEEEEC--Ce-E-EEEEecCCceEEeccccc
Confidence 000112222222 57999999999999973 22 2 12211 1100
Q ss_pred ----ccCCceeEEecceEEEccccCCcc
Q psy4525 303 ----LVTEDTELIPSGIAFRSIGYQSRC 326 (388)
Q Consensus 303 ----~~~~~~~~l~~D~Vi~a~G~~p~~ 326 (388)
...++.++++||.||+|+|++|++
T Consensus 621 ~~~~~~~~~~~~i~aD~Vv~a~G~~p~~ 648 (729)
T 1o94_A 621 VSPRDANTSHRWIEFDSLVLVTGRHSEC 648 (729)
T ss_dssp SCSSCCCCCCEEEECSEEEEESCEEECC
T ss_pred ccccccCCcceeeeCCEEEECCCCCCCh
Confidence 011233459999999999999986
No 85
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.87 E-value=8.5e-22 Score=198.03 Aligned_cols=165 Identities=12% Similarity=0.172 Sum_probs=113.7
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCCCCC---------------------------Ccc
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPD---------------------------HPE 64 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~~p~---------------------------~~~ 64 (388)
..++|+|||||++|+++|..|++ .|++|+|||+.+.+||.|..+..|. +..
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~--~G~~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~~~~~~~ 92 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLRE--LGRSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNWTERYAS 92 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCCBSSCB
T ss_pred CCCCEEEECccHHHHHHHHHHHh--CCCCEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhhccCcccccCC
Confidence 35799999999999999999999 8999999999999999884332221 112
Q ss_pred hhHHHHHHHHhhcCCC--cEEEceEEEEE----------Eeeeccc-ccccCEEEEeeCCC-CCCCCCCCCCC-CCC-ee
Q psy4525 65 VKNVINTFTKTGDNPR--VNFYGNICLGQ----------DISLGDL-TNAYHAVVLTYGAD-NDKKLNIPGED-GKN-II 128 (388)
Q Consensus 65 ~~~~~~~~~~~~~~~~--i~~~~~~~v~~----------~~~~~~~-~~~yd~lvlAtG~~-~~~~~~i~g~~-~~~-v~ 128 (388)
..++..++...+++++ .++++++.|.. .++..++ ...+|+||+|||.. .++.|++||.+ ..+ ++
T Consensus 93 ~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~AtG~~s~p~~p~i~G~~~f~G~~~ 172 (542)
T 1w4x_A 93 QPEILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQLSVPQLPNFPGLKDFAGNLY 172 (542)
T ss_dssp HHHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSCCCCCCCCCTTGGGCCSEEE
T ss_pred HHHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeCEEEECcCCCCCCCCCCCCCcccCCCceE
Confidence 3455666666665554 45666655432 1333333 24799999999953 23467888864 233 34
Q ss_pred ecccccccccCCCCccccCcCCCCCeEEEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecCcc
Q psy4525 129 SARSFVGWYNGLPEDASLDLSLDCEEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRGAL 208 (388)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~vvVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~~~ 208 (388)
+...+.. + .....+|+|+|||+|.+|+|+|..|+ ..+.+|+++.|++.+
T Consensus 173 hs~~~~~------~----~~~~~gk~V~VIG~G~sg~e~a~~l~---------------------~~~~~vtv~~r~~~~ 221 (542)
T 1w4x_A 173 HTGNWPH------E----PVDFSGQRVGVIGTGSSGIQVSPQIA---------------------KQAAELFVFQRTPHF 221 (542)
T ss_dssp EGGGCCS------S----CCCCBTCEEEEECCSHHHHHHHHHHH---------------------HHBSEEEEEESSCCC
T ss_pred ECCCCCC------c----hhccCCCEEEEECCCccHHHHHHHHh---------------------hcCceEEEEEcCCcc
Confidence 4433320 0 12346899999999999999999886 123589999999887
Q ss_pred c
Q psy4525 209 Q 209 (388)
Q Consensus 209 ~ 209 (388)
.
T Consensus 222 ~ 222 (542)
T 1w4x_A 222 A 222 (542)
T ss_dssp E
T ss_pred c
Confidence 4
No 86
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=99.87 E-value=2.1e-22 Score=200.08 Aligned_cols=255 Identities=14% Similarity=0.097 Sum_probs=152.7
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCC-c------eeeCCCCC------------------Ccchh
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFG-L------VRYGVAPD------------------HPEVK 66 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg-~------~~~g~~p~------------------~~~~~ 66 (388)
..++|+|||||+||++||..|++...+.+|+|||+++.++. . +.++..+. +....
T Consensus 10 ~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~y~r~~lsk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (493)
T 1m6i_A 10 SHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTLRFKQWNGKERSIYFQPPS 89 (493)
T ss_dssp SEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCCBCSGGGGTGGGCC--CTHHHHCEEECTTSCEEESBSSCGG
T ss_pred CcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCCCCCCCCCHHhhcCCccchhhcccccccccccccccccchH
Confidence 45799999999999999999988556899999999876431 1 11110000 00000
Q ss_pred HHHHHHHHh--hcCCCcEEEceEEEE-E-----Eeeecccc-cccCEEEEeeCCCCCCCCCCCCCC----CCCeeecccc
Q psy4525 67 NVINTFTKT--GDNPRVNFYGNICLG-Q-----DISLGDLT-NAYHAVVLTYGADNDKKLNIPGED----GKNIISARSF 133 (388)
Q Consensus 67 ~~~~~~~~~--~~~~~i~~~~~~~v~-~-----~~~~~~~~-~~yd~lvlAtG~~~~~~~~i~g~~----~~~v~~~~~~ 133 (388)
.+. ..... +.+.+++++.++.+. . .+++.++. ..||+||||||+.+ +.+++++.. .++++..+.+
T Consensus 90 ~~~-~~~~l~~~~~~gv~~~~g~~v~~id~~~~~V~~~~g~~i~yd~lviATGs~p-~~~~~~~~~~~~~~~~v~~~~~~ 167 (493)
T 1m6i_A 90 FYV-SAQDLPHIENGGVAVLTGKKVVQLDVRDNMVKLNDGSQITYEKCLIATGGTP-RSLSAIDRAGAEVKSRTTLFRKI 167 (493)
T ss_dssp GSB-CTTTTTTSTTCEEEEEETCCEEEEEGGGTEEEETTSCEEEEEEEEECCCEEE-CCCHHHHTSCHHHHHTEEECCSH
T ss_pred hhc-chhhhhhhhcCCeEEEcCCEEEEEECCCCEEEECCCCEEECCEEEECCCCCC-CCCCCcccccccccCceEEEcCH
Confidence 000 00000 124678888775442 2 24444443 48999999999987 455554421 1244433322
Q ss_pred cccccCCCCcccc-CcCCCCCeEEEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecCcccccC
Q psy4525 134 VGWYNGLPEDASL-DLSLDCEEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRGALQVAF 212 (388)
Q Consensus 134 ~~~~~~~~~~~~~-~~~~~~~~vvVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~~~~~~~ 212 (388)
.. +..+ .....+++|+|||+|++|+|+|..|+ ....+.+ .+|+++.+.+.+....
T Consensus 168 ~d-------~~~l~~~~~~~~~vvViGgG~iG~E~A~~l~----------------~~~~~~g-~~V~~v~~~~~~~~~~ 223 (493)
T 1m6i_A 168 GD-------FRSLEKISREVKSITIIGGGFLGSELACALG----------------RKARALG-TEVIQLFPEKGNMGKI 223 (493)
T ss_dssp HH-------HHHHHHHHHHCSEEEEECCSHHHHHHHHHHH----------------HHHHHHT-CEEEEECSSSSTTTTT
T ss_pred HH-------HHHHHHHhhcCCeEEEECCCHHHHHHHHHHH----------------hhhhhcC-CEEEEEecCccccccc
Confidence 11 0000 11123789999999999999999886 1001112 3699998875432221
Q ss_pred CHHHHHHHhcCCCceEEecccccccchhhhccccchhhHHHHHHHhhCCCCCCCCCCceeEEEEecCcceeeeeCCCCce
Q psy4525 213 TIKEFREMTKLPHVQTVFRNEQLCGVHEASATLARPRKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTEFKLNDNGAI 292 (388)
Q Consensus 213 ~~~el~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~v 292 (388)
.++++. +.+.+.+. +.||++++++.++++..++ +.+
T Consensus 224 l~~~~~-------------------------------~~~~~~l~------------~~GV~v~~~~~V~~i~~~~-~~~ 259 (493)
T 1m6i_A 224 LPEYLS-------------------------------NWTMEKVR------------REGVKVMPNAIVQSVGVSS-GKL 259 (493)
T ss_dssp SCHHHH-------------------------------HHHHHHHH------------TTTCEEECSCCEEEEEEET-TEE
T ss_pred CCHHHH-------------------------------HHHHHHHH------------hcCCEEEeCCEEEEEEecC-CeE
Confidence 112211 12222222 6799999999999997532 333
Q ss_pred eEEEEccCccccCCceeEEecceEEEccccCCccCC---CCCcccC-CCccccCCCC
Q psy4525 293 TGINFANQQALVTEDTELIPSGIAFRSIGYQSRCVD---SDIPFNE-KSCTVIPKEG 345 (388)
Q Consensus 293 ~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~p~~~~---~~l~~~~-~~gi~l~~~~ 345 (388)
.+.+ .++++++||.||+|+|++||+.. .++++++ ++|+.+|+..
T Consensus 260 -~v~l--------~dG~~i~aD~Vv~a~G~~pn~~l~~~~gl~~~~~~ggi~Vd~~l 307 (493)
T 1m6i_A 260 -LIKL--------KDGRKVETDHIVAAVGLEPNVELAKTGGLEIDSDFGGFRVNAEL 307 (493)
T ss_dssp -EEEE--------TTSCEEEESEEEECCCEEECCTTHHHHTCCBCTTTCSEECCTTC
T ss_pred -EEEE--------CCCCEEECCEEEECCCCCccHHHHHHcCCccccCCCcEEECCCc
Confidence 4543 34568999999999999999742 4667764 4688888753
No 87
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=99.86 E-value=1.1e-20 Score=187.96 Aligned_cols=172 Identities=17% Similarity=0.136 Sum_probs=115.2
Q ss_pred CCcEEEECccHHHHHHHHHHHhhC------------CCCcEEEEcCCCCCC---CceeeCCC--------------C---
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLL------------PQSTVDIYEKLPVPF---GLVRYGVA--------------P--- 60 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~------------~g~~v~lie~~~~~g---g~~~~g~~--------------p--- 60 (388)
.+||||||+||+||++|..|.+.. .+...+++|+.+.++ |++..|.. |
T Consensus 39 i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~Wh~g~~~p~~~~q~~fl~Dlvtl~~P~s~ 118 (501)
T 4b63_A 39 LHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFAWHSGMLVPGSKMQISFIKDLATLRDPRSS 118 (501)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCCSSGGGCCTTCBCSSCGGGSSSTTTCTTCT
T ss_pred cCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCCcCCCCCCCCccccccchhhhccccCCCCc
Confidence 368999999999999999998731 234678899887654 22111100 1
Q ss_pred ---------------------CCcchhHHHHHHHHhhcCCCcEEEceEEEEEE----------------eeeccc-----
Q psy4525 61 ---------------------DHPEVKNVINTFTKTGDNPRVNFYGNICLGQD----------------ISLGDL----- 98 (388)
Q Consensus 61 ---------------------~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~~----------------~~~~~~----- 98 (388)
.++...++.+|++.++++++..+++++.|... ++..+.
T Consensus 119 ~sf~~yl~~~~rl~~f~~~~~~~p~r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~ 198 (501)
T 4b63_A 119 FTFLNYLHQKGRLIHFTNLSTFLPARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEI 198 (501)
T ss_dssp TSHHHHHHHHTCHHHHHTTCCSCCBHHHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCE
T ss_pred cchHHHHHHhCCccCCccccCCCCCHHHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceE
Confidence 12445678888888888888777777776321 222111
Q ss_pred -ccccCEEEEeeCCCCCCCCCCCCCCCCCeeecccccccccCCCCccccCcCCCCCeEEEEcCChHHHHHHHHhccCCcc
Q psy4525 99 -TNAYHAVVLTYGADNDKKLNIPGEDGKNIISARSFVGWYNGLPEDASLDLSLDCEEATILGQGNVAMDVARILLSPVDQ 177 (388)
Q Consensus 99 -~~~yd~lvlAtG~~~~~~~~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVIGgG~sg~e~a~~L~~~~~~ 177 (388)
...++.||+|||..| ..|..++. ...++|+.+|......+ ....+++|+|+|||+|+||+|++..|+
T Consensus 199 ~~~~ar~vVlatG~~P-~iP~~~~~-~g~v~Hss~y~~~~~~~-----~~~~~~gKrV~VVG~G~SA~ei~~~L~----- 266 (501)
T 4b63_A 199 SARRTRKVVIAIGGTA-KMPSGLPQ-DPRIIHSSKYCTTLPAL-----LKDKSKPYNIAVLGSGQSAAEIFHDLQ----- 266 (501)
T ss_dssp EEEEEEEEEECCCCEE-CCCTTSCC-CTTEEEGGGHHHHHHHH-----SCCTTSCCEEEEECCSHHHHHHHHHHH-----
T ss_pred EEEEeCEEEECcCCCC-CCCCCCCC-Ccceeeccccccchhhc-----cccccCCcEEEEECCcHHHHHHHHHHH-----
Confidence 125789999999765 34444332 35789998887432211 023467899999999999999999886
Q ss_pred cccccCchhHHHhhhcCCCcEEEEEeecCcccc
Q psy4525 178 LKSTDITEHSLEKLSTSRIKSVNLVGRRGALQV 210 (388)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~V~~i~r~~~~~~ 210 (388)
....+.+|+++.|++.+..
T Consensus 267 --------------~~~~~~~v~~~~R~~~~~p 285 (501)
T 4b63_A 267 --------------KRYPNSRTTLIMRDSAMRP 285 (501)
T ss_dssp --------------HHSTTCEEEEECSSSSCCB
T ss_pred --------------hcCCCceEEEEeCCCcccc
Confidence 1234468999999987654
No 88
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=99.83 E-value=1.5e-21 Score=191.29 Aligned_cols=280 Identities=13% Similarity=0.079 Sum_probs=158.5
Q ss_pred CCcEEEECccHHHHHHHHHHHhh-CCCCcEEEEcCCCCCCCce-eeCCCCCCcchhHHHHHHHHhhcCCCcEEEceEEEE
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKL-LPQSTVDIYEKLPVPFGLV-RYGVAPDHPEVKNVINTFTKTGDNPRVNFYGNICLG 90 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~-~~g~~v~lie~~~~~gg~~-~~g~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~ 90 (388)
+++|+|||||+||+++|..|++. ..+.+|+|||+.+...... ...........+++...+.+.+++.+++++.+....
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~gv~~~~~~v~~ 83 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQFVPSNPWVGVGWKERDDIAFPIRHYVERKGIHFIAQSAEQ 83 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEECGGGHHHHHHTSSCHHHHEEECHHHHHTTTCEEECSCEEE
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCcccCCccccccCccCHHHHHHHHHHHHHHCCCEEEEeEEEE
Confidence 47999999999999999999983 3589999999987532110 000001222344454555667777899988665443
Q ss_pred EE-----eeecccc-cccCEEEEeeCCCCCCCCCCCCCCCC--CeeecccccccccCCCCccccCcCCCCCeEEEEcCCh
Q psy4525 91 QD-----ISLGDLT-NAYHAVVLTYGADNDKKLNIPGEDGK--NIISARSFVGWYNGLPEDASLDLSLDCEEATILGQGN 162 (388)
Q Consensus 91 ~~-----~~~~~~~-~~yd~lvlAtG~~~~~~~~i~g~~~~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVIGgG~ 162 (388)
.+ +++++.. ..||+||+|||+.+ +.+++||.+.. +.++...+.......... .....+++++|||+|+
T Consensus 84 id~~~~~V~~~~g~~i~~d~lviAtG~~~-~~~~ipG~~~~~~~~~~~~~~~~a~~~~~~~---~~~~~~~~~vVVGgG~ 159 (437)
T 3sx6_A 84 IDAEAQNITLADGNTVHYDYLMIATGPKL-AFENVPGSDPHEGPVQSICTVDHAERAFAEY---QALLREPGPIVIGAMA 159 (437)
T ss_dssp EETTTTEEEETTSCEEECSEEEECCCCEE-CGGGSTTCSTTTSSEECCSSHHHHHHHHHHH---HHHHHSCCCEEEEECT
T ss_pred EEcCCCEEEECCCCEEECCEEEECCCCCc-CcccCCCCCcccCcceecccccHHHHHHHHH---HHHHhCCCEEEEEcCC
Confidence 32 4454444 48999999999987 47788887642 332222211100000000 0001134678999866
Q ss_pred HH------HHHHHHhccCCcccccccCchhHHHhhhcCCCc---E-EEEEeecCcccccCCHHHHHHHhcCCCceEEecc
Q psy4525 163 VA------MDVARILLSPVDQLKSTDITEHSLEKLSTSRIK---S-VNLVGRRGALQVAFTIKEFREMTKLPHVQTVFRN 232 (388)
Q Consensus 163 sg------~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~---~-V~~i~r~~~~~~~~~~~el~~l~~~~~~~~~~~~ 232 (388)
+| +|+|..++ ..+++.+.. + |+++.+.+.+... . ++
T Consensus 160 ~~g~~G~~~E~a~~la----------------~~l~~~g~~~~~~~Vtlv~~~~~~~~~-~---------l~-------- 205 (437)
T 3sx6_A 160 GASCFGPAYEYAMIVA----------------SDLKKRGMRDKIPSFTFITSEPYIGHL-G---------IQ-------- 205 (437)
T ss_dssp TCCCCHHHHHHHHHHH----------------HHHHHTTCGGGCSCEEEEESSSSTTCT-T---------TT--------
T ss_pred CCCcCcHHHHHHHHHH----------------HHHHHcCCcccCcEEEEEcCCcccccc-c---------cC--------
Confidence 54 99997665 223334432 2 9999988654110 0 00
Q ss_pred cccccchhhhccccchhhHHHHHHHhhCCCCCCCCCCceeEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEe
Q psy4525 233 EQLCGVHEASATLARPRKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIP 312 (388)
Q Consensus 233 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~ 312 (388)
..+.....+.+.+. +.||++++++.++++..+ +........++. +.++++++
T Consensus 206 -----------~~~~~~~~~~~~l~------------~~gI~~~~~~~v~~v~~~--~v~~~~~~~~g~---~~~~~~i~ 257 (437)
T 3sx6_A 206 -----------GVGDSKGILTKGLK------------EEGIEAYTNCKVTKVEDN--KMYVTQVDEKGE---TIKEMVLP 257 (437)
T ss_dssp -----------CCTTHHHHHHHHHH------------HTTCEEECSEEEEEEETT--EEEEEEECTTSC---EEEEEEEE
T ss_pred -----------cchHHHHHHHHHHH------------HCCCEEEcCCEEEEEECC--eEEEEecccCCc---cccceEEE
Confidence 00111223333333 579999999999999732 211111111110 12267899
Q ss_pred cceEEEccccCCccCC---CCCcccCCCccccCCCCCCeecchhhHHhHH
Q psy4525 313 SGIAFRSIGYQSRCVD---SDIPFNEKSCTVIPKEGVPVVTWEGWKAIDK 359 (388)
Q Consensus 313 ~D~Vi~a~G~~p~~~~---~~l~~~~~~gi~l~~~~~~~~~~~~w~~~~~ 359 (388)
+|.|++++|++|+... +++ .++++.+.+|+.....-..+.|...|+
T Consensus 258 ~D~vv~~~g~~~~~~~~~~~gl-~~~~G~i~Vd~~l~t~~~~~Ifa~GD~ 306 (437)
T 3sx6_A 258 VKFGMMIPAFKGVPAVAGVEGL-CNPGGFVLVDEHQRSKKYANIFAAGIA 306 (437)
T ss_dssp CSEEEEECCEECCHHHHTSTTT-BCTTSCBCBCTTSBBSSCTTEEECGGG
T ss_pred EeEEEEcCCCcCchhhhccccc-cCCCCcEEeChhccCCCCCCEEEEEEE
Confidence 9999999999886531 344 444455777764221112344444444
No 89
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=99.83 E-value=5e-21 Score=185.84 Aligned_cols=249 Identities=13% Similarity=0.062 Sum_probs=148.9
Q ss_pred CcEEEECccHHHHHHHHHHHh-hCCCCcEEEEcCCCCCCCcee-eCCCCCCcchhHHHHHHHHhhcCCCcEEEceEEEEE
Q psy4525 14 PNVCIVGSGPAGFYCAQQILK-LLPQSTVDIYEKLPVPFGLVR-YGVAPDHPEVKNVINTFTKTGDNPRVNFYGNICLGQ 91 (388)
Q Consensus 14 ~~vvIIGaG~aGl~aA~~l~~-~~~g~~v~lie~~~~~gg~~~-~g~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 91 (388)
++|+|||||+||+++|..|++ ...+.+|+|||+++.++.... ....+......++...+.+.+.+.+++++.+.....
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~v~~i 81 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRPALPHVAIGVRDVDELKVDLSEALPEKGIQFQEGTVEKI 81 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECCSSCCCCSSCCCCCCEEEEHHHHTGGGTCEEEECEEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceeccchhhcccCCcCHHHHHHHHHHHHhhCCeEEEEeeEEEE
Confidence 589999999999999999998 446899999999876532210 001112222333444456666777899887744332
Q ss_pred E-----eeecccc-----cccCEEEEeeCCCCCCCCCCCCCCCCCeeecccccccccCCCCccccCcCCCCCeEEEEcCC
Q psy4525 92 D-----ISLGDLT-----NAYHAVVLTYGADNDKKLNIPGEDGKNIISARSFVGWYNGLPEDASLDLSLDCEEATILGQG 161 (388)
Q Consensus 92 ~-----~~~~~~~-----~~yd~lvlAtG~~~~~~~~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVIGgG 161 (388)
+ +++.+.. ..||+||+|||+.+ +.+++||.+. ..++...+.... ......... .++++|||+|
T Consensus 82 ~~~~~~V~~~~g~~~~~~~~~d~lViAtG~~~-~~~~ipG~~~-~~~~~~~~~~~~----~~~~~l~~~-~~~~vViG~G 154 (409)
T 3h8l_A 82 DAKSSMVYYTKPDGSMAEEEYDYVIVGIGAHL-ATELVKGWDK-YGYSVCEPEFAT----KLREKLESF-QGGNIAIGSG 154 (409)
T ss_dssp ETTTTEEEEECTTSCEEEEECSEEEECCCCEE-CGGGSBTHHH-HCEESSSTTHHH----HHHHHHHHC-CSEEEEEEEC
T ss_pred eCCCCEEEEccCCcccceeeCCEEEECCCCCc-CccCCCChhh-cCcCcCCHHHHH----HHHHHHHHh-cCCeEEEEec
Confidence 2 3333332 47999999999977 4667887542 222221111000 000000001 2567799999
Q ss_pred h-------------------------HHHHHHHHhccCCcccccccCchhHHHhhhcCCC---cEEEEEeecCcccccCC
Q psy4525 162 N-------------------------VAMDVARILLSPVDQLKSTDITEHSLEKLSTSRI---KSVNLVGRRGALQVAFT 213 (388)
Q Consensus 162 ~-------------------------sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~---~~V~~i~r~~~~~~~~~ 213 (388)
. .++|+|..++ ..+++.+. .+|+++.+.+ ....+.
T Consensus 155 ~f~~~~~~~~~~p~~~~p~~~~~~~~~~~e~a~~~~----------------~~l~~~g~~~~~~v~~~~~~~-~l~~~~ 217 (409)
T 3h8l_A 155 PFYQGHNPKPKVPENFVPNADSACEGPVFEMSLMLH----------------GYFKKKGMLDKVHVTVFSPGE-YLSDLS 217 (409)
T ss_dssp CBCCCCSSCCBSCTTSSCCCSCSSCHHHHHHHHHHH----------------HHHHTTTCTTTEEEEEECSSS-SSTTBC
T ss_pred ccccCCCccccccccccCCCCcccCCHHHHHHHHHH----------------HHHHHcCCCCCeEEEEEeCCc-cccccC
Confidence 2 5889887664 22233442 4799999886 322211
Q ss_pred HHHHHHHhcCCCceEEecccccccchhhhccccchhhHHHHHHHhhCCCCCCCCCCceeEEEEecCcceeeeeCCCCcee
Q psy4525 214 IKEFREMTKLPHVQTVFRNEQLCGVHEASATLARPRKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTEFKLNDNGAIT 293 (388)
Q Consensus 214 ~~el~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~v~ 293 (388)
+++ .+.+.+.+. +.||++++++.++++..+ +
T Consensus 218 -~~~-------------------------------~~~~~~~l~------------~~gV~~~~~~~v~~i~~~--~--- 248 (409)
T 3h8l_A 218 -PNS-------------------------------RKAVASIYN------------QLGIKLVHNFKIKEIREH--E--- 248 (409)
T ss_dssp -HHH-------------------------------HHHHHHHHH------------HHTCEEECSCCEEEECSS--E---
T ss_pred -HHH-------------------------------HHHHHHHHH------------HCCCEEEcCCceEEECCC--e---
Confidence 111 122223332 579999999999999732 1
Q ss_pred EEEEccCccccCCceeEEecceEEEccccCCccCC--CCCccc-CCCccccCCC
Q psy4525 294 GINFANQQALVTEDTELIPSGIAFRSIGYQSRCVD--SDIPFN-EKSCTVIPKE 344 (388)
Q Consensus 294 ~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~p~~~~--~~l~~~-~~~gi~l~~~ 344 (388)
+.+ .+++++++|.||+|+|++|+... .+..+. .++.+.+|+.
T Consensus 249 -v~~--------~~g~~~~~D~vi~a~G~~~~~~l~~~~~~l~~~~G~i~vd~~ 293 (409)
T 3h8l_A 249 -IVD--------EKGNTIPADITILLPPYTGNPALKNSTPDLVDDGGFIPTDLN 293 (409)
T ss_dssp -EEE--------TTSCEEECSEEEEECCEECCHHHHTSCGGGSCTTSCBCBBTT
T ss_pred -EEE--------CCCCEEeeeEEEECCCCCccHHHHhccccCcCCCCCEEeCcc
Confidence 333 44568999999999999998643 222443 3334777653
No 90
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.81 E-value=2e-19 Score=178.71 Aligned_cols=192 Identities=14% Similarity=0.051 Sum_probs=139.5
Q ss_pred CcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCCC--CCC-cchhHHHHHHHHhhcCCCcEEEceEEEE
Q psy4525 14 PNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVA--PDH-PEVKNVINTFTKTGDNPRVNFYGNICLG 90 (388)
Q Consensus 14 ~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~~--p~~-~~~~~~~~~~~~~~~~~~i~~~~~~~v~ 90 (388)
++|+||||||||+++|..|++ . .+|+|||+++.+||.+.+... ..+ ....++..++.+.+ ..+++++.++.+.
T Consensus 109 ~dVvIIGgG~aGl~aA~~L~~--~-~~V~vie~~~~~GG~~~~~~~~~~g~~~~~~~~~~~l~~~l-~~~v~~~~~~~v~ 184 (493)
T 1y56_A 109 VDVAIIGGGPAGIGAALELQQ--Y-LTVALIEERGWLGGDMWLKGIKQEGFNKDSRKVVEELVGKL-NENTKIYLETSAL 184 (493)
T ss_dssp ESCCEECCSHHHHHHHHHHTT--T-CCEEEECTTSSSSCSGGGTCSEETTTTEEHHHHHHHHHHTC-CTTEEEETTEEEC
T ss_pred CCEEEECccHHHHHHHHHHHh--c-CCEEEEeCCCCCCCeeeccccccCCCCCCHHHHHHHHHHHH-hcCCEEEcCCEEE
Confidence 589999999999999999999 6 999999999999888754211 111 13455666666656 6789888777652
Q ss_pred E-E-------e-eeccc---ccccCEEEEeeCCCCCCCCCCCCCCCCCeeecccccccccCCCCccccCcCCCCCeEEEE
Q psy4525 91 Q-D-------I-SLGDL---TNAYHAVVLTYGADNDKKLNIPGEDGKNIISARSFVGWYNGLPEDASLDLSLDCEEATIL 158 (388)
Q Consensus 91 ~-~-------~-~~~~~---~~~yd~lvlAtG~~~~~~~~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVI 158 (388)
. + + ..+.. ...||+||+|||+.+ +.+++||.+.+++++..++....+. .....+++++||
T Consensus 185 ~i~~~~~~~~~~~~~~~~~~~~~~d~lvlAtGa~~-~~~~~~g~~~~gv~~~~~~~~~~~~-------~~~~~~~~vvVi 256 (493)
T 1y56_A 185 GVFDKGEYFLVPVVRGDKLIEILAKRVVLATGAID-STMLFENNDMPGVFRRDFALEVMNV-------WEVAPGRKVAVT 256 (493)
T ss_dssp CCEECSSSEEEEEEETTEEEEEEESCEEECCCEEE-CCCCCTTTTSTTEEEHHHHHHHHHT-------SCBCSCSEEEEE
T ss_pred EEEcCCcEEEEEEecCCeEEEEECCEEEECCCCCc-cCCCCCCCCCCCEEEcHHHHHHHHh-------cccCCCCEEEEE
Confidence 1 0 1 11222 248999999999987 5788999998999987766532221 112346899999
Q ss_pred cCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecCcccccCCHHHHHHHhcCCCceEEecccccccc
Q psy4525 159 GQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRGALQVAFTIKEFREMTKLPHVQTVFRNEQLCGV 238 (388)
Q Consensus 159 GgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~~~~~~~~~~el~~l~~~~~~~~~~~~~~~~~~ 238 (388)
|+|++|+| ..|.
T Consensus 257 GgG~~gle--~~l~------------------------------------------------------------------ 268 (493)
T 1y56_A 257 GSKADEVI--QELE------------------------------------------------------------------ 268 (493)
T ss_dssp STTHHHHH--HHHH------------------------------------------------------------------
T ss_pred CCCHHHHH--HHHH------------------------------------------------------------------
Confidence 99999987 2110
Q ss_pred hhhhccccchhhHHHHHHHhhCCCCCCCCCCceeEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEecceEEE
Q psy4525 239 HEASATLARPRKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPSGIAFR 318 (388)
Q Consensus 239 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~ 318 (388)
+.||+++++..++++..+ +.+..+.+ .++++++||.||+
T Consensus 269 -------------------------------~~GV~v~~~~~v~~i~~~--~~v~~v~~--------~~g~~i~aD~Vv~ 307 (493)
T 1y56_A 269 -------------------------------RWGIDYVHIPNVKRVEGN--EKVERVID--------MNNHEYKVDALIF 307 (493)
T ss_dssp -------------------------------HHTCEEEECSSEEEEECS--SSCCEEEE--------TTCCEEECSEEEE
T ss_pred -------------------------------hCCcEEEeCCeeEEEecC--CceEEEEe--------CCCeEEEeCEEEE
Confidence 467889999999999853 44555543 3456899999999
Q ss_pred ccccCCcc
Q psy4525 319 SIGYQSRC 326 (388)
Q Consensus 319 a~G~~p~~ 326 (388)
|+|++|+.
T Consensus 308 a~G~~p~~ 315 (493)
T 1y56_A 308 ADGRRPDI 315 (493)
T ss_dssp CCCEEECC
T ss_pred CCCcCcCc
Confidence 99999997
No 91
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=99.80 E-value=1.3e-20 Score=184.13 Aligned_cols=239 Identities=13% Similarity=0.174 Sum_probs=134.3
Q ss_pred CcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCce-eeCCCCCCcchhHHHHHHHHhhcCCCcEEEceEEEEEE
Q psy4525 14 PNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLV-RYGVAPDHPEVKNVINTFTKTGDNPRVNFYGNICLGQD 92 (388)
Q Consensus 14 ~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~-~~g~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~~ 92 (388)
|+|||||||+||+++|..|++..++.+|||||+++...-.. .+.+.......+++...+.+.+++.+++++.+.....+
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~~~p~l~~v~~g~~~~~~i~~~~~~~~~~~gv~~i~~~v~~Id 82 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINEKAESID 82 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEECSCEEEEE
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCccCccHHHHhcCCCCHHHhhhcHHHHHHHCCcEEEEeEEEEEE
Confidence 58999999999999999999866779999999987532110 00000011122333333445566778999887655443
Q ss_pred -----eeecccc-cccCEEEEeeCCCCCCCCCCCCCC--CCCeeecccccccccCCCCccccCcCCCCCeEEEEcCCh--
Q psy4525 93 -----ISLGDLT-NAYHAVVLTYGADNDKKLNIPGED--GKNIISARSFVGWYNGLPEDASLDLSLDCEEATILGQGN-- 162 (388)
Q Consensus 93 -----~~~~~~~-~~yd~lvlAtG~~~~~~~~i~g~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVIGgG~-- 162 (388)
+++++++ ..||+||||||+.+ .+++||.+ ...+.+..+.....+. +......+.++|+|++.
T Consensus 83 ~~~~~V~~~~g~~i~YD~LViAtG~~~--~~~i~G~~e~~~~~~~~~~a~~~~~~------l~~~~~~~~~vv~gg~~gv 154 (430)
T 3hyw_A 83 PDANTVTTQSGKKIEYDYLVIATGPKL--VFGAEGQEENSTSICTAEHALETQKK------LQELYANPGPVVIGAIPGV 154 (430)
T ss_dssp TTTTEEEETTCCEEECSEEEECCCCEE--ECCSBTHHHHSCCCSSHHHHHHHHHH------HHHHHHSCCCEEEEECTTC
T ss_pred CCCCEEEECCCCEEECCEEEEeCCCCc--cCCccCcccCcCCcccHHHHHHHHHH------HHhhccCCceEEEeCCCcE
Confidence 5565554 48999999999875 35677743 1122222111100000 00111234566666552
Q ss_pred ----HHHHHHHHhccCCcccccccCchhHHHhhhcCCC---cEEEEEeecCcccccCCHHHHHHHhcCCCceEEeccccc
Q psy4525 163 ----VAMDVARILLSPVDQLKSTDITEHSLEKLSTSRI---KSVNLVGRRGALQVAFTIKEFREMTKLPHVQTVFRNEQL 235 (388)
Q Consensus 163 ----sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~---~~V~~i~r~~~~~~~~~~~el~~l~~~~~~~~~~~~~~~ 235 (388)
.+.|++..+. ..+++.+. .+|+++...+.+. .+..
T Consensus 155 e~~~~~~e~a~~~~----------------~~l~~~g~~~~v~v~~~~~~~~l~-~~~~--------------------- 196 (430)
T 3hyw_A 155 SCFGPAYEFALMLH----------------YELKKRGIRYKVPMTFITSEPYLG-HFGV--------------------- 196 (430)
T ss_dssp CCCHHHHHHHHHHH----------------HHHHHTTCGGGCCEEEECSSSSTT-CTTT---------------------
T ss_pred EEhHHHHHHHHHHH----------------HHHHHhcccccceeeeecccchhh-hccc---------------------
Confidence 2334444332 11222221 2477776554321 1000
Q ss_pred ccchhhhccccchhhHHHHHHHhhCCCCCCCCCCceeEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEecce
Q psy4525 236 CGVHEASATLARPRKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPSGI 315 (388)
Q Consensus 236 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~ 315 (388)
...+...+.+.+.+. ++||++++++.++++.. +. +.+.+ .+++++++++|+
T Consensus 197 -------~~~~~~~~~l~~~l~------------~~GV~~~~~~~v~~v~~---~~---~~~~~----~~g~~~~i~~d~ 247 (430)
T 3hyw_A 197 -------GGIGASKRLVEDLFA------------ERNIDWIANVAVKAIEP---DK---VIYED----LNGNTHEVPAKF 247 (430)
T ss_dssp -------TCSTTHHHHHHHHHH------------HTTCEEECSCEEEEECS---SE---EEEEC----TTSCEEEEECSE
T ss_pred -------hhhHHHHHHHHHHHH------------hCCeEEEeCceEEEEeC---Cc---eEEEe----eCCCceEeecce
Confidence 000111222223333 67999999999999863 22 22222 246678999999
Q ss_pred EEEccccCCccC
Q psy4525 316 AFRSIGYQSRCV 327 (388)
Q Consensus 316 Vi~a~G~~p~~~ 327 (388)
|++++|++|+..
T Consensus 248 vi~~~G~~~~~~ 259 (430)
T 3hyw_A 248 TMFMPSFQGPEV 259 (430)
T ss_dssp EEEECEEECCHH
T ss_pred EEEeccCCCchH
Confidence 999999999864
No 92
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=99.78 E-value=1.8e-19 Score=174.38 Aligned_cols=272 Identities=13% Similarity=0.010 Sum_probs=149.2
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCce-eeCCCCCCcchhHHHHHHHHhhcCCCcEEEceEEEEE
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLV-RYGVAPDHPEVKNVINTFTKTGDNPRVNFYGNICLGQ 91 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~-~~g~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 91 (388)
.|+||||||||||+++|.+|++..++.+|+|||+++..+... .+.+.......+++...+.. +...+++++.+..+..
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~v~~g~~~~~~~~~~~~~-~~~~gv~~i~~~v~~i 80 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTCYMSNEVIGGDRELASLRVGYDG-LRAHGIQVVHDSALGI 80 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECSTTHHHHHHTSSCGGGGEECSHH-HHHTTCEEECSCEEEE
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCccCHHHHhcCCCCHHHHhhCHHH-HHHCCCEEEEeEEEEE
Confidence 579999999999999999999866678999999986532111 00000001111112111222 2235899887766544
Q ss_pred E-----eeecccc-cccCEEEEeeCCCCCCCCCCCCCCCC----CeeecccccccccCCCCccccCcCCCCCeEEEEcCC
Q psy4525 92 D-----ISLGDLT-NAYHAVVLTYGADNDKKLNIPGEDGK----NIISARSFVGWYNGLPEDASLDLSLDCEEATILGQG 161 (388)
Q Consensus 92 ~-----~~~~~~~-~~yd~lvlAtG~~~~~~~~i~g~~~~----~v~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVIGgG 161 (388)
+ +.+.+.. ..||+||+|||+.+ +.+++||.+.. .++........ ...............+|+++|
T Consensus 81 d~~~~~v~~~~g~~i~yd~LviAtG~~~-~~~~i~G~~e~~~~~~~~~~~~~~~~----~~~~~~l~~~~~~~~~v~~~~ 155 (401)
T 3vrd_B 81 DPDKKLVKTAGGAEFAYDRCVVAPGIDL-LYDKIEGYSEALAAKLPHAWKAGEQT----ALLRRQLESMDDGGVVIIAPP 155 (401)
T ss_dssp ETTTTEEEETTSCEEECSEEEECCCEEE-CGGGSBTCCSGGGGTSCCCSSCSHHH----HHHHHHHHHSCTTCEEEEECC
T ss_pred EccCcEEEecccceeecceeeeccCCcc-ccCCccCchhhcccCccceeccHHHH----HHHHHHHHhcccCCcEEEecC
Confidence 3 4444443 48999999999987 47788886521 11111000000 000000011122334444433
Q ss_pred -------hHHHHHHHHhccCCcccccccCchhHHHhhhc-CCCcEEEEEeecCcccccCCHHHHHHHhcCCCceEEeccc
Q psy4525 162 -------NVAMDVARILLSPVDQLKSTDITEHSLEKLST-SRIKSVNLVGRRGALQVAFTIKEFREMTKLPHVQTVFRNE 233 (388)
Q Consensus 162 -------~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~-~~~~~V~~i~r~~~~~~~~~~~el~~l~~~~~~~~~~~~~ 233 (388)
..+.|++..++ ..+++ ....+|+++.+.+.+... +.
T Consensus 156 ~~~i~~~~a~~e~~~~~a----------------~~~~~~~~~~~v~i~~~~~~~~~~---~~----------------- 199 (401)
T 3vrd_B 156 APPFRCPPGPYERASQIA----------------HYLKAHKSKSKVIILDNSQTFSKQ---AQ----------------- 199 (401)
T ss_dssp SSSCBCTTHHHHHHHHHH----------------HHHHHHCTTCEEEEECSSSSCTTH---HH-----------------
T ss_pred CccEEeehHHHHHHHHHH----------------HHHHhcCCCCEEEEEccccccccc---cc-----------------
Confidence 34555555443 11111 223579998877654211 11
Q ss_pred ccccchhhhccccchhhHHHHHHHhhCCCCCCCCCCceeEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEec
Q psy4525 234 QLCGVHEASATLARPRKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPS 313 (388)
Q Consensus 234 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~ 313 (388)
+.+.+...... .+.+.||+++++..+..+..+.+. ..++ +++++++++
T Consensus 200 ------------------~~~~~~~~~~~----~l~~~gi~v~~~~~v~~v~~~~~~--~~v~--------~~~g~~i~~ 247 (401)
T 3vrd_B 200 ------------------FTKGWERLYGF----GTENALIEWHPGPDAAVVKTDTEA--MTVE--------TSFGETFKA 247 (401)
T ss_dssp ------------------HHHHHHHHSCT----TSTTCSEEEECTTTTCEEEEETTT--TEEE--------ETTSCEEEC
T ss_pred ------------------ccHHHHHHHHH----HHHhcCcEEEeCceEEEEEecccc--eEEE--------cCCCcEEEe
Confidence 11111111111 234789999999999888764322 2233 466678999
Q ss_pred ceEEEccccCCccCC--CCCcccCCCccccCCCCCCeec-chhhHHhHH
Q psy4525 314 GIAFRSIGYQSRCVD--SDIPFNEKSCTVIPKEGVPVVT-WEGWKAIDK 359 (388)
Q Consensus 314 D~Vi~a~G~~p~~~~--~~l~~~~~~gi~l~~~~~~~~~-~~~w~~~~~ 359 (388)
|+|++++|.+|+.+. +++ .++++.+.+|++..+.+. .+.|...|+
T Consensus 248 D~vi~~~g~~~~~~~~~~gl-~~~~G~i~VD~~tl~~t~~p~VfAiGDv 295 (401)
T 3vrd_B 248 AVINLIPPQRAGKIAQSASL-TNDSGWCPVDIRTFESSLQPGIHVIGDA 295 (401)
T ss_dssp SEEEECCCEEECHHHHHTTC-CCTTSSBCBCTTTCBBSSSTTEEECGGG
T ss_pred eEEEEecCcCCchhHhhccc-cccCCCEEECCCcceecCCCCEEEeccc
Confidence 999999999998642 444 244555888876543332 345555553
No 93
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=99.77 E-value=5.5e-20 Score=179.72 Aligned_cols=253 Identities=12% Similarity=0.139 Sum_probs=145.7
Q ss_pred CcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceee-CCCCCCcchhHHHHHHHHhhcCCCcEEEceEEEEEE
Q psy4525 14 PNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRY-GVAPDHPEVKNVINTFTKTGDNPRVNFYGNICLGQD 92 (388)
Q Consensus 14 ~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~-g~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~~ 92 (388)
++|+|||||+||+++|..|++...+.+|+|||+++.+++.... ...+......++...+.+.+++.+++++.+.....+
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gv~~~~~~v~~id 82 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINEKAESID 82 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEECSCEEEEE
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCCCcchhccCccCHHHHHHHHHHHHHhcCCEEEEEEEEEEE
Confidence 6899999999999999999995468999999999776432100 000111122333333445566678888876444322
Q ss_pred -----eeecccc-cccCEEEEeeCCCCCCCCCCCCCCC----CCeeecccccccccCCCCccccCcCCCCCeEEEEcCCh
Q psy4525 93 -----ISLGDLT-NAYHAVVLTYGADNDKKLNIPGEDG----KNIISARSFVGWYNGLPEDASLDLSLDCEEATILGQGN 162 (388)
Q Consensus 93 -----~~~~~~~-~~yd~lvlAtG~~~~~~~~i~g~~~----~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVIGgG~ 162 (388)
+.+.+.. ..||+||+|||+.+. .+ |... ..+++..+.......+ .....+++++|||+|+
T Consensus 83 ~~~~~v~~~~g~~i~~d~liiAtG~~~~-~p---g~~~~g~~~~~~~~~~a~~~~~~~------~~~~~~~~~vVVGgG~ 152 (430)
T 3h28_A 83 PDANTVTTQSGKKIEYDYLVIATGPKLV-FG---AEGQEENSTSICTAEHALETQKKL------QELYANPGPVVIGAIP 152 (430)
T ss_dssp TTTTEEEETTCCEEECSEEEECCCCEEE-CC---SBTHHHHSCCCSSHHHHHHHHHHH------HHHHHSCCCEEEEECT
T ss_pred CCCCEEEECCCcEEECCEEEEcCCcccc-cC---CCCCcCCccCcCCHHHHHHHHHHH------HHHHhcCCeEEEEcCC
Confidence 4444443 489999999998763 33 3221 1122222211100000 0001134678999976
Q ss_pred HH------HHHHHHhccCCcccccccCchhHHHhhhcCCC---cEEEEEeecCcccccCCHHHHHHHhcCCCceEEeccc
Q psy4525 163 VA------MDVARILLSPVDQLKSTDITEHSLEKLSTSRI---KSVNLVGRRGALQVAFTIKEFREMTKLPHVQTVFRNE 233 (388)
Q Consensus 163 sg------~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~---~~V~~i~r~~~~~~~~~~~el~~l~~~~~~~~~~~~~ 233 (388)
+| +|+|..++ ..+++.+. .+|+++.+.+.+... . ++
T Consensus 153 ~~~~~G~~~E~a~~la----------------~~l~~~g~~~~~~V~~v~~~~~~~~~-~---------l~--------- 197 (430)
T 3h28_A 153 GVSCFGPAYEFALMLH----------------YELKKRGIRYKVPMTFITSEPYLGHF-G---------VG--------- 197 (430)
T ss_dssp TCCCCHHHHHHHHHHH----------------HHHHHTTCGGGCCEEEECSSSSTTCT-T---------TT---------
T ss_pred CCCcCcHHHHHHHHHH----------------HHHHHcCCccceEEEEecCCcccccc-c---------cC---------
Confidence 64 99987665 12223332 368998887643110 0 00
Q ss_pred ccccchhhhccccchhhHHHHHHHhhCCCCCCCCCCceeEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEec
Q psy4525 234 QLCGVHEASATLARPRKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPS 313 (388)
Q Consensus 234 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~ 313 (388)
..+.....+.+.+. +.||++++++.++++..+ . +.+.+. .++++++++
T Consensus 198 ----------~~~~~~~~l~~~l~------------~~GV~i~~~~~v~~v~~~---~---v~~~~~----~~~g~~i~~ 245 (430)
T 3h28_A 198 ----------GIGASKRLVEDLFA------------ERNIDWIANVAVKAIEPD---K---VIYEDL----NGNTHEVPA 245 (430)
T ss_dssp ----------CSTTHHHHHHHHHH------------HTTCEEECSCEEEEECSS---E---EEEECT----TSCEEEEEC
T ss_pred ----------cchHHHHHHHHHHH------------HCCCEEEeCCEEEEEeCC---e---EEEEec----CCCceEEee
Confidence 00111222333333 679999999999999732 2 333221 245789999
Q ss_pred ceEEEccccCCccCC----CCCcccCCC-ccccCCC
Q psy4525 314 GIAFRSIGYQSRCVD----SDIPFNEKS-CTVIPKE 344 (388)
Q Consensus 314 D~Vi~a~G~~p~~~~----~~l~~~~~~-gi~l~~~ 344 (388)
|.|++|+|++|+... .++ .++++ .+.+|+.
T Consensus 246 D~vv~a~G~~~~~~l~~~~~gl-~~~~G~~i~Vd~~ 280 (430)
T 3h28_A 246 KFTMFMPSFQGPEVVASAGDKV-ANPANKMVIVNRC 280 (430)
T ss_dssp SEEEEECEEECCHHHHTTCTTT-BCTTTCCBCCCTT
T ss_pred eEEEECCCCccchhHhhccccC-cCCCCCEEecCcc
Confidence 999999999987531 244 34444 4777764
No 94
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=99.20 E-value=3.5e-13 Score=126.47 Aligned_cols=139 Identities=17% Similarity=0.061 Sum_probs=84.2
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeC-CCCCCcchhHHHHHHHHhhcCCCcEEEceEEEE
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYG-VAPDHPEVKNVINTFTKTGDNPRVNFYGNICLG 90 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g-~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~ 90 (388)
..+||+||||||||++||.+|++...|++|+|||+.+.+||.+.++ +.+....... ....++++.++++..+...
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~~~~~~~~~~~l~~---~~~~~~~e~Gv~~~~~~~~- 139 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRK---PAHLFLQELEIPYEDEGDY- 139 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCSTTCCCEEEET---TTHHHHHHTTCCCEECSSE-
T ss_pred cCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEEeCCccCCHHHHHH---HHHHHHHHcCCEEEECCcc-
Confidence 4579999999999999999997644799999999999999988653 2222221111 1122334456655433211
Q ss_pred EEeeecccccccCEEEEeeCCCCCCCCCCCCCCCCCeeecccccccccCCCCccccCcCCCCCeEEEEcCChHHHHHHHH
Q psy4525 91 QDISLGDLTNAYHAVVLTYGADNDKKLNIPGEDGKNIISARSFVGWYNGLPEDASLDLSLDCEEATILGQGNVAMDVARI 170 (388)
Q Consensus 91 ~~~~~~~~~~~yd~lvlAtG~~~~~~~~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVIGgG~sg~e~a~~ 170 (388)
....+.++++++..+ +.+.++|..........++... . .....+++++|||+|++++|.|..
T Consensus 140 --------~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~-------~--~~~~~~~~v~viggg~~av~~a~~ 201 (326)
T 3fpz_A 140 --------VVVKHAALFISTVLS-KVLQLPNVKLFNATCVEDLVTR-------P--PTEKGEVTVAGVVTNWTLVTQAHG 201 (326)
T ss_dssp --------EEESCHHHHHHHHHH-HHHTSTTEEEETTEEEEEEEEE-------S--SCSSSSCEEEEEEEEEHHHHTCTT
T ss_pred --------eecceeEEEEcchhh-hccccccceeecccccceeecc-------C--CcccCCCEEEEEccCceeeehhhh
Confidence 112233344555444 3556666543222222222211 0 233457899999999999999885
Q ss_pred hc
Q psy4525 171 LL 172 (388)
Q Consensus 171 L~ 172 (388)
+.
T Consensus 202 ~~ 203 (326)
T 3fpz_A 202 TQ 203 (326)
T ss_dssp SS
T ss_pred hh
Confidence 54
No 95
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=98.90 E-value=3.6e-09 Score=89.92 Aligned_cols=96 Identities=14% Similarity=0.168 Sum_probs=69.2
Q ss_pred CcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCc--e--e-eCCCCCCcchhHHHHHHHHhhcCCCcEEEceEE
Q psy4525 14 PNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGL--V--R-YGVAPDHPEVKNVINTFTKTGDNPRVNFYGNIC 88 (388)
Q Consensus 14 ~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~--~--~-~g~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 88 (388)
++|+|||||++|+.+|..|.+ .|.+|+++|+.+..... + . .+. |......++...+.+.+++.+++++.+ .
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~--~g~~v~lie~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~gv~v~~~-~ 77 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLAR--AGLKVLVLDGGRSKVKGVSRVPNYPGL-LDEPSGEELLRRLEAHARRYGAEVRPG-V 77 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--TTCCEEEEECSCCTTTTCSCCCCSTTC-TTCCCHHHHHHHHHHHHHHTTCEEEEC-C
T ss_pred CeEEEECCCHHHHHHHHHHHH--CCCcEEEEeCCCCcccCchhhhccCCC-cCCCCHHHHHHHHHHHHHHcCCEEEeC-E
Confidence 589999999999999999999 89999999988632211 0 0 111 222345678888888888889999877 4
Q ss_pred EEE--------EeeecccccccCEEEEeeCCCC
Q psy4525 89 LGQ--------DISLGDLTNAYHAVVLTYGADN 113 (388)
Q Consensus 89 v~~--------~~~~~~~~~~yd~lvlAtG~~~ 113 (388)
+.. .+..++....+|.||+|+|..+
T Consensus 78 v~~i~~~~~~~~v~~~~g~i~ad~vI~A~G~~~ 110 (180)
T 2ywl_A 78 VKGVRDMGGVFEVETEEGVEKAERLLLCTHKDP 110 (180)
T ss_dssp CCEEEECSSSEEEECSSCEEEEEEEEECCTTCC
T ss_pred EEEEEEcCCEEEEEECCCEEEECEEEECCCCCC
Confidence 421 1333333447999999999876
No 96
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=98.89 E-value=7e-10 Score=106.87 Aligned_cols=98 Identities=15% Similarity=0.269 Sum_probs=67.6
Q ss_pred CcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCC--------ce---eeCCCCC--------C------------
Q psy4525 14 PNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFG--------LV---RYGVAPD--------H------------ 62 (388)
Q Consensus 14 ~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg--------~~---~~g~~p~--------~------------ 62 (388)
+||+|||||++|+++|..|++ .|.+|+|+|+.+.+|+ .+ +.++.|. +
T Consensus 5 ~dViIIGgG~aGl~aA~~la~--~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 82 (401)
T 2gqf_A 5 SENIIIGAGAAGLFCAAQLAK--LGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNWD 82 (401)
T ss_dssp CSEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHHH
T ss_pred CCEEEECCcHHHHHHHHHHHh--CCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHHH
Confidence 699999999999999999999 8999999999987643 22 1111110 0
Q ss_pred ---------------------c--chhHHHHHHHHhhcCCCcEEEceEEEEEE------------eeecccccccCEEEE
Q psy4525 63 ---------------------P--EVKNVINTFTKTGDNPRVNFYGNICLGQD------------ISLGDLTNAYHAVVL 107 (388)
Q Consensus 63 ---------------------~--~~~~~~~~~~~~~~~~~i~~~~~~~v~~~------------~~~~~~~~~yd~lvl 107 (388)
+ ...++.+.+.+.+++.|++++.++.+..- +...+....+|+||+
T Consensus 83 ~~~~~~~~Gi~~~~~~~g~~~p~~~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~~v~~~~g~i~ad~VVl 162 (401)
T 2gqf_A 83 FISLVAEQGITYHEKELGQLFCDEGAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVRFVLQVNSTQWQCKNLIV 162 (401)
T ss_dssp HHHHHHHTTCCEEECSTTEEEETTCTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCCEEEEETTEEEEESEEEE
T ss_pred HHHHHHhCCCceEECcCCEEccCCCHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCeEEEEECCCEEECCEEEE
Confidence 0 23445566666777778998877665221 222222347899999
Q ss_pred eeCCCC
Q psy4525 108 TYGADN 113 (388)
Q Consensus 108 AtG~~~ 113 (388)
|||+.+
T Consensus 163 AtG~~s 168 (401)
T 2gqf_A 163 ATGGLS 168 (401)
T ss_dssp CCCCSS
T ss_pred CCCCcc
Confidence 999876
No 97
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=98.85 E-value=4e-09 Score=102.06 Aligned_cols=101 Identities=20% Similarity=0.316 Sum_probs=69.1
Q ss_pred CCCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCce--------ee---CCC--------CCC---------
Q psy4525 11 QLKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLV--------RY---GVA--------PDH--------- 62 (388)
Q Consensus 11 ~~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~--------~~---g~~--------p~~--------- 62 (388)
...+||+|||||+||+++|..|++ .|.+|+|+|+.+.+|+.+ +. ... |.+
T Consensus 25 ~~~~dViIIGgG~AGl~aA~~La~--~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~ 102 (417)
T 3v76_A 25 AEKQDVVIIGAGAAGMMCAIEAGK--RGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYR 102 (417)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHH--CCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcC
Confidence 345799999999999999999999 899999999998775432 10 000 100
Q ss_pred --------------------------cchhHHHHHHHHhhcCCCcEEEceEEEEEE--------eeecccccccCEEEEe
Q psy4525 63 --------------------------PEVKNVINTFTKTGDNPRVNFYGNICLGQD--------ISLGDLTNAYHAVVLT 108 (388)
Q Consensus 63 --------------------------~~~~~~~~~~~~~~~~~~i~~~~~~~v~~~--------~~~~~~~~~yd~lvlA 108 (388)
....++.+.+.+.+++.|++++.++.|... +...+....+|+||+|
T Consensus 103 ~~~~~~~~~~~Gi~~~~~~~g~~~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~~~V~~~~g~i~ad~VIlA 182 (417)
T 3v76_A 103 PQDFVALVERHGIGWHEKTLGQLFCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTASGFRVTTSAGTVDAASLVVA 182 (417)
T ss_dssp HHHHHHHHHHTTCCEEECSTTEEEESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETTEEEEESEEEEC
T ss_pred HHHHHHHHHHcCCCcEEeeCCEEeeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCcEEEeeEEEEC
Confidence 012355666666777778999887665321 3333334478999999
Q ss_pred eCCCC
Q psy4525 109 YGADN 113 (388)
Q Consensus 109 tG~~~ 113 (388)
||..+
T Consensus 183 tG~~S 187 (417)
T 3v76_A 183 SGGKS 187 (417)
T ss_dssp CCCSS
T ss_pred CCCcc
Confidence 99876
No 98
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=98.82 E-value=9.9e-09 Score=87.20 Aligned_cols=128 Identities=8% Similarity=-0.016 Sum_probs=76.5
Q ss_pred eEEEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecCcccccCCHHHHHHHhcCCCceEEeccc
Q psy4525 154 EATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRGALQVAFTIKEFREMTKLPHVQTVFRNE 233 (388)
Q Consensus 154 ~vvVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~~~~~~~~~~el~~l~~~~~~~~~~~~~ 233 (388)
+|+|||||.+|+++|..|+ +.+ .+|+++.+.+....... .+...|.+
T Consensus 3 ~vvIIGgG~~Gl~~A~~l~--------------------~~g-~~v~lie~~~~~~~~~~-----~~~~~~~~------- 49 (180)
T 2ywl_A 3 DVIVVGGGPSGLSAALFLA--------------------RAG-LKVLVLDGGRSKVKGVS-----RVPNYPGL------- 49 (180)
T ss_dssp EEEEECCSHHHHHHHHHHH--------------------HTT-CCEEEEECSCCTTTTCS-----CCCCSTTC-------
T ss_pred eEEEECCCHHHHHHHHHHH--------------------HCC-CcEEEEeCCCCcccCch-----hhhccCCC-------
Confidence 6999999999999999886 234 46999998864321100 00000000
Q ss_pred ccccchhhhccccchhhHHHHHHHhhCCCCCCCCCCceeEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEec
Q psy4525 234 QLCGVHEASATLARPRKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPS 313 (388)
Q Consensus 234 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~ 313 (388)
+.. .....+...+.+.+ .+.|++++++ .++++..++++ ..++ +.++ ++++
T Consensus 50 --------~~~--~~~~~~~~~l~~~~--------~~~gv~v~~~-~v~~i~~~~~~--~~v~--------~~~g-~i~a 99 (180)
T 2ywl_A 50 --------LDE--PSGEELLRRLEAHA--------RRYGAEVRPG-VVKGVRDMGGV--FEVE--------TEEG-VEKA 99 (180)
T ss_dssp --------TTC--CCHHHHHHHHHHHH--------HHTTCEEEEC-CCCEEEECSSS--EEEE--------CSSC-EEEE
T ss_pred --------cCC--CCHHHHHHHHHHHH--------HHcCCEEEeC-EEEEEEEcCCE--EEEE--------ECCC-EEEE
Confidence 000 00122222222222 1568999999 99999865332 2232 3344 7999
Q ss_pred ceEEEccccCCccC-CCCCcccCCCccccCCCC
Q psy4525 314 GIAFRSIGYQSRCV-DSDIPFNEKSCTVIPKEG 345 (388)
Q Consensus 314 D~Vi~a~G~~p~~~-~~~l~~~~~~gi~l~~~~ 345 (388)
|.||+|+|.+|+.. ..+++++ ++.+.+|+..
T Consensus 100 d~vI~A~G~~~~~~~~~g~~~~-~g~i~vd~~~ 131 (180)
T 2ywl_A 100 ERLLLCTHKDPTLPSLLGLTRR-GAYIDTDEGG 131 (180)
T ss_dssp EEEEECCTTCCHHHHHHTCCEE-TTEECCCTTC
T ss_pred CEEEECCCCCCCccccCCCCcc-CceEEeCCCC
Confidence 99999999999753 2467777 4446566543
No 99
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.71 E-value=1.1e-07 Score=84.37 Aligned_cols=98 Identities=14% Similarity=0.030 Sum_probs=65.0
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCCCCCC--------------cchhHHHHHHHHhhcC
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDH--------------PEVKNVINTFTKTGDN 78 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~~p~~--------------~~~~~~~~~~~~~~~~ 78 (388)
.++|+|||||++|+++|..|++ .|.+|+++|+.....|.+.....+.. +....+...+.+.+++
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~--~g~~v~lie~~~~~~G~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~~~l~~~~~~ 80 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQ--KGVRVGLLTQSLDAVMMPFLPPKPPFPPGSLLERAYDPKDERVWAFHARAKYLLEG 80 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH--TTCCEEEEESCGGGTTCCSSCCCSCCCTTCHHHHHCCTTCCCHHHHHHHHHHHHHT
T ss_pred CCCEEEECcCHHHHHHHHHHHH--CCCCEEEEecCCCcCCcccCccccccchhhHHhhhccCCCCCHHHHHHHHHHHHHc
Confidence 4799999999999999999999 89999999998433332211000000 0123556667777777
Q ss_pred C-CcEEEceEEEEE---------Eeeeccc-ccccCEEEEeeCCCC
Q psy4525 79 P-RVNFYGNICLGQ---------DISLGDL-TNAYHAVVLTYGADN 113 (388)
Q Consensus 79 ~-~i~~~~~~~v~~---------~~~~~~~-~~~yd~lvlAtG~~~ 113 (388)
. +++++.. .+.. .+...+. ...+|.||+|||...
T Consensus 81 ~~gv~i~~~-~v~~i~~~~~~v~~v~~~~g~~i~a~~VV~A~G~~s 125 (232)
T 2cul_A 81 LRPLHLFQA-TATGLLLEGNRVVGVRTWEGPPARGEKVVLAVGSFL 125 (232)
T ss_dssp CTTEEEEEC-CEEEEEEETTEEEEEEETTSCCEECSEEEECCTTCS
T ss_pred CCCcEEEEe-EEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCCh
Confidence 6 8888743 3321 1223333 347899999999866
No 100
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.70 E-value=7.6e-08 Score=88.12 Aligned_cols=98 Identities=23% Similarity=0.254 Sum_probs=65.9
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCC-CCcEEEEcCCCCCCCc-eee--------------------CCCCCC--------
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLP-QSTVDIYEKLPVPFGL-VRY--------------------GVAPDH-------- 62 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~-g~~v~lie~~~~~gg~-~~~--------------------g~~p~~-------- 62 (388)
.+||+|||||++|+++|..|++ . |.+|+|+|+.+.++|. |.. |+ |..
T Consensus 39 ~~dVvIIGgG~aGl~aA~~la~--~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~-~~~~~~~~~~~ 115 (284)
T 1rp0_A 39 ETDVVVVGAGSAGLSAAYEISK--NPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGV-AYDEQDTYVVV 115 (284)
T ss_dssp EEEEEEECCSHHHHHHHHHHHT--STTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTC-CCEECSSEEEE
T ss_pred ccCEEEECccHHHHHHHHHHHH--cCCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCC-CcccCCCEEEe
Confidence 4699999999999999999998 6 9999999999877643 221 11 110
Q ss_pred cchhHHHHHHHHhhc-CCCcEEEceEEEEEE---------eeec---------c------cccccCEEEEeeCCCC
Q psy4525 63 PEVKNVINTFTKTGD-NPRVNFYGNICLGQD---------ISLG---------D------LTNAYHAVVLTYGADN 113 (388)
Q Consensus 63 ~~~~~~~~~~~~~~~-~~~i~~~~~~~v~~~---------~~~~---------~------~~~~yd~lvlAtG~~~ 113 (388)
....++...+.+.+. ..|++++.++.+..- +... + ....+|.||+|||..+
T Consensus 116 ~~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s 191 (284)
T 1rp0_A 116 KHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDG 191 (284)
T ss_dssp SCHHHHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSSS
T ss_pred cCHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccccCccccCceEEEECCEEEECCCCch
Confidence 023445555555554 469999887765321 1111 1 1236899999999765
No 101
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.68 E-value=5.5e-08 Score=96.27 Aligned_cols=101 Identities=15% Similarity=0.127 Sum_probs=71.0
Q ss_pred CCCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCCCC----------------C-------CcchhH
Q psy4525 11 QLKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAP----------------D-------HPEVKN 67 (388)
Q Consensus 11 ~~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~~p----------------~-------~~~~~~ 67 (388)
...++|+||||||+|+++|..|++ .|.+|+|||+.+.+|+....+..| . .....+
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~--~G~~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 167 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELAL--LGARVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGRFCTGTLDHISIRQ 167 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTTTTCTTCCEEEHHH
T ss_pred cCCCCEEEECccHHHHHHHHHHHH--CCCeEEEEEeccccCCCCcccCChhHHHHHHHcCCccccccccccccccCCHHH
Confidence 356899999999999999999999 899999999998776432111111 0 011255
Q ss_pred HHHHHHHhhcCCCcEEEceEEEEE-----------Eeee--c-cc---ccccCEEEEeeCCCC
Q psy4525 68 VINTFTKTGDNPRVNFYGNICLGQ-----------DISL--G-DL---TNAYHAVVLTYGADN 113 (388)
Q Consensus 68 ~~~~~~~~~~~~~i~~~~~~~v~~-----------~~~~--~-~~---~~~yd~lvlAtG~~~ 113 (388)
+...+.+.+.+.+++++.++.+.. .+++ . ++ ...+|+||+|+|..+
T Consensus 168 l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S 230 (497)
T 2bry_A 168 LQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKF 230 (497)
T ss_dssp HHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTC
T ss_pred HHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCc
Confidence 666677777778999988776532 1222 1 22 237899999999876
No 102
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.67 E-value=5.9e-08 Score=92.53 Aligned_cols=101 Identities=15% Similarity=0.077 Sum_probs=68.6
Q ss_pred CCCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCc---e--e---------eCCC-----------------
Q psy4525 11 QLKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGL---V--R---------YGVA----------------- 59 (388)
Q Consensus 11 ~~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~---~--~---------~g~~----------------- 59 (388)
+..++|+|||||++|+++|..|++ .|.+|+|+|+.+.+++. + . .|+.
T Consensus 9 m~~~dVvIVGaG~aGl~~A~~L~~--~G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~ 86 (379)
T 3alj_A 9 GKTRRAEVAGGGFAGLTAAIALKQ--NGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPPTYETWM 86 (379)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCBCCSCEEEEE
T ss_pred CCCCeEEEECCCHHHHHHHHHHHH--CCCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCCCccceEEEe
Confidence 346899999999999999999999 89999999998765421 0 0 0000
Q ss_pred -------------CC-CcchhHHHHHHHHhhcCCCcEEEceEEEEE-----Eeeecccc-cccCEEEEeeCCCC
Q psy4525 60 -------------PD-HPEVKNVINTFTKTGDNPRVNFYGNICLGQ-----DISLGDLT-NAYHAVVLTYGADN 113 (388)
Q Consensus 60 -------------p~-~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~-----~~~~~~~~-~~yd~lvlAtG~~~ 113 (388)
|. ......+...+.+.+.+.|++++.++.+.. .++..++. ..+|.||.|+|..+
T Consensus 87 ~g~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~~v~~~~g~~~~ad~vV~AdG~~s 160 (379)
T 3alj_A 87 HNKSVSKETFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADPVGRLTLQTGEVLEADLIVGADGVGS 160 (379)
T ss_dssp TTEEEEEECGGGCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEETTTEEEETTSCEEECSEEEECCCTTC
T ss_pred CCceeeeccCCCCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEeCCEEEECCCCEEEcCEEEECCCccH
Confidence 00 011245566666667667899998876533 23343333 47999999999766
No 103
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.62 E-value=1.1e-07 Score=95.77 Aligned_cols=35 Identities=20% Similarity=0.123 Sum_probs=32.3
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCC
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLP 48 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~ 48 (388)
..+||+|||||+||++||..+++ .|.+|+|+|+.+
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr--~G~kVlLIEk~~ 61 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAAR--MGQQTLLLTHNI 61 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHH--TTCCEEEEESCG
T ss_pred CcCCEEEECChHHHHHHHHHHHh--CCCCEEEEeecc
Confidence 35799999999999999999999 899999999874
No 104
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.60 E-value=3.5e-08 Score=88.26 Aligned_cols=40 Identities=25% Similarity=0.396 Sum_probs=37.5
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCce
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLV 54 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~ 54 (388)
..+|+||||||||++||..|++ .|++|+|||+.+.+||.+
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~--~G~~V~v~Ek~~~~GG~~ 41 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTA--AGHQVHLFDKSRGSGGRM 41 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSSCGGG
T ss_pred CCCEEEECcCHHHHHHHHHHHH--CCCCEEEEECCCCCCCcc
Confidence 3689999999999999999999 899999999999999865
No 105
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=98.59 E-value=3.2e-08 Score=94.28 Aligned_cols=37 Identities=30% Similarity=0.266 Sum_probs=34.0
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCC
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPF 51 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~g 51 (388)
.+||+||||||||+++|..|++ .|++|+|||+.+.++
T Consensus 4 ~yDViIVGaGpaGl~~A~~La~--~G~~V~v~Er~~~~~ 40 (397)
T 3oz2_A 4 TYDVLVVGGGPGGSTAARYAAK--YGLKTLMIEKRPEIG 40 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSTT
T ss_pred CCCEEEECcCHHHHHHHHHHHH--CCCcEEEEeCCCCCC
Confidence 4799999999999999999999 899999999987654
No 106
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.54 E-value=1.7e-07 Score=93.48 Aligned_cols=36 Identities=17% Similarity=0.239 Sum_probs=33.0
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCC
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVP 50 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~ 50 (388)
.+||+||||||+|+++|..|++ .|++|+|+|+.+.+
T Consensus 107 ~~DVVIVGgGpaGL~aA~~La~--~G~kV~VlEr~~~~ 142 (549)
T 3nlc_A 107 TERPIVIGFGPCGLFAGLVLAQ--MGFNPIIVERGKEV 142 (549)
T ss_dssp CCCCEEECCSHHHHHHHHHHHH--TTCCCEEECSSCCH
T ss_pred CCCEEEECcCHHHHHHHHHHHH--CCCeEEEEEccCcc
Confidence 4799999999999999999999 89999999998643
No 107
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=98.49 E-value=5.6e-08 Score=95.61 Aligned_cols=31 Identities=26% Similarity=0.412 Sum_probs=29.9
Q ss_pred cEEEECccHHHHHHHHHHHhhCCCCcEEEEcCC
Q psy4525 15 NVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKL 47 (388)
Q Consensus 15 ~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~ 47 (388)
||+|||+|+||+++|..|++ .|.+|+|+|+.
T Consensus 1 DVvVIG~G~AGl~aA~~la~--~G~~V~viek~ 31 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRR--AGKKVTLISKR 31 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHH--TTCCEEEECSS
T ss_pred CEEEECCCHHHHHHHHHHHH--CCCCEEEEeCC
Confidence 69999999999999999999 89999999998
No 108
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=98.46 E-value=3.1e-07 Score=89.65 Aligned_cols=39 Identities=21% Similarity=0.289 Sum_probs=35.0
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCC
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFG 52 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg 52 (388)
..+||+|||||++|+++|..|++ .|.+|+|+|+.+.+|+
T Consensus 25 ~~~dVvIIGgG~aGl~aA~~la~--~G~~V~llEk~~~~g~ 63 (447)
T 2i0z_A 25 MHYDVIVIGGGPSGLMAAIGAAE--EGANVLLLDKGNKLGR 63 (447)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSSCH
T ss_pred CCCCEEEECCcHHHHHHHHHHHH--CCCCEEEEECCCCCCc
Confidence 34799999999999999999999 8999999999876653
No 109
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.45 E-value=2.3e-07 Score=89.49 Aligned_cols=99 Identities=20% Similarity=0.173 Sum_probs=66.0
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCC----CCceee---------CC---------C-----------
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVP----FGLVRY---------GV---------A----------- 59 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~----gg~~~~---------g~---------~----------- 59 (388)
.+||+|||||++|+++|..|++ .|.+|+|+|+.+.+ |..+.. |+ .
T Consensus 5 ~~dVvIIGgG~aGl~~A~~La~--~G~~V~v~E~~~~~~~~~g~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 82 (421)
T 3nix_A 5 KVDVLVIGAGPAGTVAASLVNK--SGFKVKIVEKQKFPRFVIGESLLPRCMEHLDEAGFLDAVKAQGFQQKFGAKFVRGK 82 (421)
T ss_dssp EEEEEEECCSHHHHHHHHHHHT--TTCCEEEECSSCSSCCCSCCBCCGGGHHHHHHTTCHHHHHHTTCEEECEEEEEETT
T ss_pred cCcEEEECCCHHHHHHHHHHHh--CCCCEEEEeCCCCCCCcccCcccHhHHHHHHHcCChHHHHHcCCcccCCcEEEeCC
Confidence 3799999999999999999999 89999999998632 211100 00 0
Q ss_pred -------C-------C---CcchhHHHHHHHHhhcCCCcEEEceEEEEEE----------eeecccc---cccCEEEEee
Q psy4525 60 -------P-------D---HPEVKNVINTFTKTGDNPRVNFYGNICLGQD----------ISLGDLT---NAYHAVVLTY 109 (388)
Q Consensus 60 -------p-------~---~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~~----------~~~~~~~---~~yd~lvlAt 109 (388)
+ . ......+...+.+.+.+.|++++.++.+... +...++. ..+|.||.|+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~~~a~~vV~A~ 162 (421)
T 3nix_A 83 EIADFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEARFIIDAS 162 (421)
T ss_dssp EEEEEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETTSCEEEEEEEEEEECC
T ss_pred eeEEEeehhhcCCCCCceeEECHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEEEEcCEEEECC
Confidence 0 0 0123455666666676678999988765321 2223333 4789999999
Q ss_pred CCCC
Q psy4525 110 GADN 113 (388)
Q Consensus 110 G~~~ 113 (388)
|..+
T Consensus 163 G~~s 166 (421)
T 3nix_A 163 GYGR 166 (421)
T ss_dssp GGGC
T ss_pred CCch
Confidence 9764
No 110
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.41 E-value=1.5e-06 Score=81.01 Aligned_cols=40 Identities=30% Similarity=0.472 Sum_probs=35.2
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCC
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFG 52 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg 52 (388)
.+||+|||||++|+++|..|++..+|.+|+|+|+.+.+||
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GG 118 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGG 118 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCT
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCC
Confidence 4799999999999999999999434999999999987763
No 111
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.38 E-value=1.1e-06 Score=81.85 Aligned_cols=39 Identities=26% Similarity=0.405 Sum_probs=36.1
Q ss_pred CcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCce
Q psy4525 14 PNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLV 54 (388)
Q Consensus 14 ~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~ 54 (388)
++|+|||||++|+++|..|++ .|.+|+|||+.+.+||.+
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~--~G~~V~vlE~~~~~gg~~ 41 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTA--AGHQVHLFDKSRGSGGRM 41 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSSCGGG
T ss_pred ceEEEECCcHHHHHHHHHHHH--CCCcEEEEECCCCCcccc
Confidence 699999999999999999999 899999999998887654
No 112
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=98.38 E-value=4.4e-07 Score=86.66 Aligned_cols=38 Identities=29% Similarity=0.262 Sum_probs=34.2
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCC
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFG 52 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg 52 (388)
.+||+|||||++|+++|..|++ .|.+|+|+|+.+.+|+
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~--~G~~V~l~E~~~~~g~ 41 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAK--YGLKTLMIEKRPEIGS 41 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSTTC
T ss_pred cCCEEEECcCHHHHHHHHHHHH--CCCCEEEEeCCCCCCC
Confidence 3699999999999999999999 8999999999876543
No 113
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.35 E-value=1.6e-06 Score=82.99 Aligned_cols=99 Identities=16% Similarity=0.066 Sum_probs=67.2
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCC--C--c-ee---------e----------------------
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPF--G--L-VR---------Y---------------------- 56 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~g--g--~-~~---------~---------------------- 56 (388)
.++|+|||||++|+++|..|++ .|.+|+|+|+.+.+. + . +. .
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~--~G~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~ 83 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGR--QGHRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEVYHD 83 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTCEEECEEEEEET
T ss_pred cCCEEEECcCHHHHHHHHHHHh--CCCcEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCCCcceeEEEeCC
Confidence 3699999999999999999999 899999999976541 0 0 00 0
Q ss_pred CC----CCC----------CcchhHHHHHHHHhhcCC-CcEEEceEEEEE----------Eeeeccc-ccccCEEEEeeC
Q psy4525 57 GV----APD----------HPEVKNVINTFTKTGDNP-RVNFYGNICLGQ----------DISLGDL-TNAYHAVVLTYG 110 (388)
Q Consensus 57 g~----~p~----------~~~~~~~~~~~~~~~~~~-~i~~~~~~~v~~----------~~~~~~~-~~~yd~lvlAtG 110 (388)
|. .+. ......+...+.+.+.+. |++++.++.+.. .++..++ ...+|.||.|+|
T Consensus 84 g~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~~g~~~~ad~vV~AdG 163 (399)
T 2x3n_A 84 GELLRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLNDGRVLRPRVVVGADG 163 (399)
T ss_dssp TEEEEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECCC
T ss_pred CCEEEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEECCCCEEECCEEEECCC
Confidence 00 000 012345667777778777 899988766532 2333333 237899999999
Q ss_pred CCC
Q psy4525 111 ADN 113 (388)
Q Consensus 111 ~~~ 113 (388)
..+
T Consensus 164 ~~s 166 (399)
T 2x3n_A 164 IAS 166 (399)
T ss_dssp TTC
T ss_pred CCh
Confidence 765
No 114
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=98.33 E-value=1.7e-06 Score=87.01 Aligned_cols=40 Identities=38% Similarity=0.393 Sum_probs=36.1
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCc
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGL 53 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~ 53 (388)
..+||+|||||+||+++|..|++ .|.+|+|+|+.+.+||.
T Consensus 125 ~~~DVvVVGaG~aGl~aA~~la~--~G~~V~vlEk~~~~gg~ 164 (571)
T 1y0p_A 125 DTVDVVVVGSGGAGFSAAISATD--SGAKVILIEKEPVIGGN 164 (571)
T ss_dssp EECSEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSSCTT
T ss_pred CCCCEEEECCCHHHHHHHHHHHH--CCCcEEEEeCCCCCCCc
Confidence 35799999999999999999999 89999999999877653
No 115
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.31 E-value=2.8e-06 Score=84.81 Aligned_cols=36 Identities=25% Similarity=0.343 Sum_probs=33.0
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCC
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVP 50 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~ 50 (388)
.++|+||||||+|+++|..|++ .|.+|+|||+.+.+
T Consensus 5 ~~dVlIVGaG~aGl~~A~~La~--~G~~v~viEr~~~~ 40 (535)
T 3ihg_A 5 EVDVLVVGAGLGGLSTAMFLAR--QGVRVLVVERRPGL 40 (535)
T ss_dssp SEEEEEECCSHHHHHHHHHHHT--TTCCEEEECSSSSC
T ss_pred cCcEEEECcCHHHHHHHHHHHH--CCCCEEEEeCCCCC
Confidence 4799999999999999999999 89999999998643
No 116
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.30 E-value=1.3e-06 Score=87.75 Aligned_cols=99 Identities=16% Similarity=0.218 Sum_probs=64.9
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCC-------------------Cce------------e-eC-C-
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPF-------------------GLV------------R-YG-V- 58 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~g-------------------g~~------------~-~g-~- 58 (388)
.++|+||||||+|+++|..|++ .|++|+|||+.+.+. |.+ . ++ .
T Consensus 49 ~~DVvIVGaG~aGL~~A~~La~--~G~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~~~~~~~ 126 (570)
T 3fmw_A 49 TTDVVVVGGGPVGLMLAGELRA--GGVGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGLPFAGIF 126 (570)
T ss_dssp --CEEEECCSHHHHHHHHHHHH--TTCCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBCCBTTBC
T ss_pred CCCEEEECcCHHHHHHHHHHHH--CCCCEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcccCCceeCCcc
Confidence 4799999999999999999999 899999999876532 111 0 10 0
Q ss_pred --C----------CC--CcchhHHHHHHHHhhcCCCcEEEceEEEEE--------Eeee--ccc--ccccCEEEEeeCCC
Q psy4525 59 --A----------PD--HPEVKNVINTFTKTGDNPRVNFYGNICLGQ--------DISL--GDL--TNAYHAVVLTYGAD 112 (388)
Q Consensus 59 --~----------p~--~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~--------~~~~--~~~--~~~yd~lvlAtG~~ 112 (388)
. |. ......+...+.+.+.+.|++++.++.+.. .+++ .++ ...+|+||.|.|..
T Consensus 127 ~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~v~v~~~~~~G~~~~~a~~vV~ADG~~ 206 (570)
T 3fmw_A 127 TQGLDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDAEAVEVTVAGPSGPYPVRARYGVGCDGGR 206 (570)
T ss_dssp TTCCBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCSSCEEEEEEETTEEEEEEESEEEECSCSS
T ss_pred cccccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCeEEEEEEeCCCcEEEEeCEEEEcCCCC
Confidence 0 00 012344555666666666888887776532 1333 333 34799999999976
Q ss_pred C
Q psy4525 113 N 113 (388)
Q Consensus 113 ~ 113 (388)
+
T Consensus 207 S 207 (570)
T 3fmw_A 207 S 207 (570)
T ss_dssp C
T ss_pred c
Confidence 5
No 117
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.29 E-value=1.5e-06 Score=86.34 Aligned_cols=34 Identities=21% Similarity=0.295 Sum_probs=32.1
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCC
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLP 48 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~ 48 (388)
.++|+|||||++|+++|..|++ .|++|+|||+.+
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~--~G~~V~liE~~~ 40 (512)
T 3e1t_A 7 VFDLIVIGGGPGGSTLASFVAM--RGHRVLLLEREA 40 (512)
T ss_dssp EEEEEEECCSHHHHHHHHHHHT--TTCCEEEECSSC
T ss_pred cCCEEEECcCHHHHHHHHHHHh--CCCCEEEEccCC
Confidence 4799999999999999999999 899999999986
No 118
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.28 E-value=3.2e-06 Score=80.94 Aligned_cols=37 Identities=27% Similarity=0.521 Sum_probs=33.6
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCC
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVP 50 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~ 50 (388)
..++|+||||||+|+++|..|++ .|++|+|||+.+.+
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~--~G~~v~v~E~~~~~ 40 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRD--AGVDVDVYERSPQP 40 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHh--CCCCEEEEecCCCC
Confidence 35799999999999999999999 89999999998653
No 119
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.28 E-value=2.4e-06 Score=85.87 Aligned_cols=34 Identities=18% Similarity=0.288 Sum_probs=32.0
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCC
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLP 48 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~ 48 (388)
.+||+|||||+||++||..+++ .|.+|+|+|+.+
T Consensus 27 ~yDVIVIGgG~AGl~AAlalAr--~G~kVlLIEk~~ 60 (637)
T 2zxi_A 27 EFDVVVIGGGHAGIEAALAAAR--MGAKTAMFVLNA 60 (637)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH--TTCCEEEEESCG
T ss_pred cCCEEEECCCHHHHHHHHHHHH--CCCCEEEEEecc
Confidence 5899999999999999999999 899999999874
No 120
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.27 E-value=1.6e-06 Score=82.44 Aligned_cols=37 Identities=16% Similarity=0.225 Sum_probs=33.3
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCC
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVP 50 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~ 50 (388)
..+||+|||||++|+++|..|++ .|.+|+|+|+....
T Consensus 16 ~~~dvvIIGgG~~Gl~~A~~La~--~G~~V~llE~~~~~ 52 (382)
T 1ryi_A 16 RHYEAVVIGGGIIGSAIAYYLAK--ENKNTALFESGTMG 52 (382)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSTT
T ss_pred CCCCEEEECcCHHHHHHHHHHHh--CCCcEEEEeCCCCC
Confidence 34799999999999999999999 89999999997543
No 121
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.27 E-value=3.2e-06 Score=78.36 Aligned_cols=39 Identities=38% Similarity=0.464 Sum_probs=34.4
Q ss_pred CcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCC
Q psy4525 14 PNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFG 52 (388)
Q Consensus 14 ~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg 52 (388)
+||+||||||+|+++|..|++..++.+|+|+|+.+.+||
T Consensus 66 ~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~gg 104 (326)
T 2gjc_A 66 SDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGG 104 (326)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCT
T ss_pred CCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccc
Confidence 489999999999999999999333999999999888764
No 122
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.27 E-value=2.4e-06 Score=82.01 Aligned_cols=37 Identities=19% Similarity=0.319 Sum_probs=33.6
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCC
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVP 50 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~ 50 (388)
++++|+||||||+|+++|..|++ .|++|+|||+.+.+
T Consensus 22 ~~~dV~IVGaG~aGl~~A~~La~--~G~~V~v~E~~~~~ 58 (407)
T 3rp8_A 22 GHMKAIVIGAGIGGLSAAVALKQ--SGIDCDVYEAVKEI 58 (407)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESSSCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHh--CCCCEEEEeCCCCC
Confidence 46899999999999999999999 89999999998754
No 123
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.27 E-value=1.9e-06 Score=86.89 Aligned_cols=37 Identities=32% Similarity=0.530 Sum_probs=33.4
Q ss_pred CCCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCC
Q psy4525 11 QLKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPV 49 (388)
Q Consensus 11 ~~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~ 49 (388)
+..++|+|||||+||+++|..|++ .|.+|+|+|+.+.
T Consensus 21 M~~~DVvIVGgG~AGl~aA~~Lar--~G~~V~LiEr~~~ 57 (591)
T 3i3l_A 21 MTRSKVAIIGGGPAGSVAGLTLHK--LGHDVTIYERSAF 57 (591)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSCS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHc--CCCCEEEEcCCCC
Confidence 345899999999999999999999 8999999999853
No 124
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.23 E-value=2e-06 Score=80.64 Aligned_cols=41 Identities=24% Similarity=0.357 Sum_probs=35.5
Q ss_pred CcEEEECccHHHHHHHHHHHh-hCCCCcEEEEcCCCCCCCce
Q psy4525 14 PNVCIVGSGPAGFYCAQQILK-LLPQSTVDIYEKLPVPFGLV 54 (388)
Q Consensus 14 ~~vvIIGaG~aGl~aA~~l~~-~~~g~~v~lie~~~~~gg~~ 54 (388)
++|+|||||++|+++|..|++ ...|++|+|||+.+.+||.+
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~gg~~ 43 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDSGGRM 43 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSSCGGG
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCCccce
Confidence 589999999999999999988 23588999999998888754
No 125
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=98.22 E-value=1.1e-06 Score=83.86 Aligned_cols=98 Identities=20% Similarity=0.163 Sum_probs=65.4
Q ss_pred CcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCC---CCceee-----------CCC--------------------
Q psy4525 14 PNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVP---FGLVRY-----------GVA-------------------- 59 (388)
Q Consensus 14 ~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~---gg~~~~-----------g~~-------------------- 59 (388)
++|+||||||+|+++|..|++..+|.+|+|+|+.+.+ |..+.. +..
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQEVLGWGVVLPGRPGQHPANPLSYLDAPERLNPQFLEDFKLVHH 80 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTTCCCCSEEEEESCTTTCTTCGGGGSSCGGGGCCEEECCEEEEES
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCCCcceeEEEeCcHHHHhhcCcchhhhhhHHHhhccccceEEEeC
Confidence 4899999999999999999993349999999998665 221100 000
Q ss_pred ----------CCC-cchhHHHHHHHHhhcCCCcEEEceEEEEEEeeecccccccCEEEEeeCCCC
Q psy4525 60 ----------PDH-PEVKNVINTFTKTGDNPRVNFYGNICLGQDISLGDLTNAYHAVVLTYGADN 113 (388)
Q Consensus 60 ----------p~~-~~~~~~~~~~~~~~~~~~i~~~~~~~v~~~~~~~~~~~~yd~lvlAtG~~~ 113 (388)
+.. ....++...+.+.+.+.|+++++++.+..... .....+|.||.|+|..+
T Consensus 81 g~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~--~~~~~ad~vV~AdG~~S 143 (381)
T 3c4a_A 81 NEPSLMSTGVLLCGVERRGLVHALRDKCRSQGIAIRFESPLLEHGE--LPLADYDLVVLANGVNH 143 (381)
T ss_dssp SSEEECCCCSCEEEEEHHHHHHHHHHHHHHTTCEEETTCCCCSGGG--CCGGGCSEEEECCGGGG
T ss_pred CeeEEecCCCceeeecHHHHHHHHHHHHHHCCCEEEeCCEeccchh--cccccCCEEEECCCCCc
Confidence 000 12345666666777667888888877632111 11247899999999765
No 126
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.22 E-value=3.4e-06 Score=82.14 Aligned_cols=92 Identities=17% Similarity=0.195 Sum_probs=69.2
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCCCCCCcchhHHHHHHHHhhcCCCcEEEceEEEEE
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTKTGDNPRVNFYGNICLGQ 91 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 91 (388)
.+++++|||+|++|+.+|..+++ .|.+|+++++.+.+. +. ....++...+.+.+++.|++++.++.+..
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~--~g~~Vtlv~~~~~~l--------~~-~~~~~~~~~l~~~l~~~gv~i~~~~~v~~ 216 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAK--AGKKVTVIDILDRPL--------GV-YLDKEFTDVLTEEMEANNITIATGETVER 216 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESSSSTT--------TT-TCCHHHHHHHHHHHHTTTEEEEESCCEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHH--CCCeEEEEecCcccc--------cc-cCCHHHHHHHHHHHHhCCCEEEcCCEEEE
Confidence 56899999999999999999999 899999999986543 21 12345667777888889999998765532
Q ss_pred E--------eeecccccccCEEEEeeCCCCC
Q psy4525 92 D--------ISLGDLTNAYHAVVLTYGADND 114 (388)
Q Consensus 92 ~--------~~~~~~~~~yd~lvlAtG~~~~ 114 (388)
. +..++....+|.||+|+|..|.
T Consensus 217 i~~~~~v~~v~~~~~~i~~d~vi~a~G~~p~ 247 (447)
T 1nhp_A 217 YEGDGRVQKVVTDKNAYDADLVVVAVGVRPN 247 (447)
T ss_dssp EECSSBCCEEEESSCEEECSEEEECSCEEES
T ss_pred EEccCcEEEEEECCCEEECCEEEECcCCCCC
Confidence 1 2222223479999999997763
No 127
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.22 E-value=5.9e-06 Score=79.15 Aligned_cols=36 Identities=31% Similarity=0.504 Sum_probs=33.2
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCC
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPV 49 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~ 49 (388)
..++|+||||||+|+++|..|++ .|.+|+|||+.+.
T Consensus 25 ~~~dV~IVGaG~aGl~~A~~L~~--~G~~v~v~E~~~~ 60 (398)
T 2xdo_A 25 SDKNVAIIGGGPVGLTMAKLLQQ--NGIDVSVYERDND 60 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHT--TTCEEEEEECSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHH--CCCCEEEEeCCCC
Confidence 45799999999999999999999 8999999999764
No 128
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=98.20 E-value=2.2e-06 Score=86.09 Aligned_cols=39 Identities=31% Similarity=0.448 Sum_probs=35.3
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCC
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFG 52 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg 52 (388)
..+||+|||+|+||+++|..|++ .|.+|+|||+.+.+||
T Consensus 120 ~~~DVvVVG~G~aGl~aA~~la~--~G~~V~vlEk~~~~gg 158 (566)
T 1qo8_A 120 ETTQVLVVGAGSAGFNASLAAKK--AGANVILVDKAPFSGG 158 (566)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH--HTCCEEEECSSSSSCT
T ss_pred CCCCEEEECCCHHHHHHHHHHHH--CCCcEEEEeCCCCCCC
Confidence 35799999999999999999999 7999999999987665
No 129
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.19 E-value=9.4e-07 Score=87.29 Aligned_cols=40 Identities=20% Similarity=0.241 Sum_probs=31.8
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCce
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLV 54 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~ 54 (388)
+|+|||||||++||+||..|++ .|++|+|+|+++.+||..
T Consensus 1 Mk~VvVIGaG~~GL~aA~~La~--~G~~V~VlEa~~~~GG~~ 40 (501)
T 4dgk_A 1 MKPTTVIGAGFGGLALAIRLQA--AGIPVLLLEQRDKPGGRA 40 (501)
T ss_dssp CCCEEEECCHHHHHHHHHHHHH--TTCCEEEECCC-------
T ss_pred CCCEEEECCcHHHHHHHHHHHH--CCCcEEEEccCCCCCCcE
Confidence 4799999999999999999999 999999999999999976
No 130
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.19 E-value=2.8e-06 Score=80.58 Aligned_cols=89 Identities=13% Similarity=0.104 Sum_probs=69.1
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCCCCCCcchhHHHHHHHHhhcCCCcEEEceEEEEE-
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTKTGDNPRVNFYGNICLGQ- 91 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~- 91 (388)
.++++|||+|+.|+.+|..|++ .|.+|+++++.+.+. | ...++.+.+.+.+++.|++++.++.+..
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~--~g~~Vtlv~~~~~~l--------~---~~~~~~~~l~~~l~~~gV~i~~~~~v~~i 209 (367)
T 1xhc_A 143 SGEAIIIGGGFIGLELAGNLAE--AGYHVKLIHRGAMFL--------G---LDEELSNMIKDMLEETGVKFFLNSELLEA 209 (367)
T ss_dssp HSEEEEEECSHHHHHHHHHHHH--TTCEEEEECSSSCCT--------T---CCHHHHHHHHHHHHHTTEEEECSCCEEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHh--CCCEEEEEeCCCeec--------c---CCHHHHHHHHHHHHHCCCEEEcCCEEEEE
Confidence 3799999999999999999999 899999999987653 3 2345667777778888999998866532
Q ss_pred ---EeeecccccccCEEEEeeCCCCC
Q psy4525 92 ---DISLGDLTNAYHAVVLTYGADND 114 (388)
Q Consensus 92 ---~~~~~~~~~~yd~lvlAtG~~~~ 114 (388)
.+.+.+++..+|.||+|+|..|.
T Consensus 210 ~~~~v~~~~g~i~~D~vi~a~G~~p~ 235 (367)
T 1xhc_A 210 NEEGVLTNSGFIEGKVKICAIGIVPN 235 (367)
T ss_dssp CSSEEEETTEEEECSCEEEECCEEEC
T ss_pred EeeEEEECCCEEEcCEEEECcCCCcC
Confidence 13333333579999999997763
No 131
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.18 E-value=6e-06 Score=83.24 Aligned_cols=38 Identities=32% Similarity=0.412 Sum_probs=33.9
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCC------CCcEEEEcCCCCCCC
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLP------QSTVDIYEKLPVPFG 52 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~------g~~v~lie~~~~~gg 52 (388)
.+||+||||||||+++|..|++ . |.+|+|+|+.+.+|+
T Consensus 35 ~~DVvIVGaG~aGlaaA~~La~--~~~~~~~G~~V~vlEk~~~~g~ 78 (584)
T 2gmh_A 35 EADVVIVGAGPAGLSAATRLKQ--LAAQHEKDLRVCLVEKAAHIGA 78 (584)
T ss_dssp ECSEEEECCSHHHHHHHHHHHH--HHHHTTCCCCEEEECSSSSTTT
T ss_pred CCCEEEECcCHHHHHHHHHHHh--cccccCCCCcEEEEeCCCCCCC
Confidence 3799999999999999999999 5 999999999876653
No 132
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.17 E-value=3.5e-06 Score=80.45 Aligned_cols=34 Identities=29% Similarity=0.462 Sum_probs=31.8
Q ss_pred CcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCC
Q psy4525 14 PNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPV 49 (388)
Q Consensus 14 ~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~ 49 (388)
++|+||||||+|+++|..|++ .|++|+|+|+.+.
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~--~G~~v~v~E~~~~ 36 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHK--AGIDNVILERQTP 36 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHH--HTCCEEEECSSCH
T ss_pred ccEEEECCCHHHHHHHHHHHH--CCCCEEEEeCCCC
Confidence 689999999999999999999 8999999998763
No 133
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.17 E-value=3.1e-06 Score=82.63 Aligned_cols=99 Identities=21% Similarity=0.165 Sum_probs=65.9
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCC--CCc-----e------eeCCC------------------CC
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVP--FGL-----V------RYGVA------------------PD 61 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~--gg~-----~------~~g~~------------------p~ 61 (388)
.++|+||||||||+++|..|++ .|.+|+|+|+.+.+ |.. + ..+.. |.
T Consensus 6 ~~dVvIVGaG~aGl~aA~~La~--~G~~V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 83 (453)
T 3atr_A 6 KYDVLIIGGGFAGSSAAYQLSR--RGLKILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELENKINGIKLYSPD 83 (453)
T ss_dssp ECSEEEECCSHHHHHHHHHHSS--SSCCEEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCCCCGGGEEEEEEEEEEECTT
T ss_pred cCCEEEECcCHHHHHHHHHHHH--CCCCEEEEECCCCCCCCcccccccccHHHHHHhcCCCCchHHHHhhhcceEEECCC
Confidence 3799999999999999999999 89999999998643 111 0 00100 10
Q ss_pred C------------cchhHHHHHHHHhhcCCCcEEEceEEEEEE---------eeec---cc---ccccCEEEEeeCCCC
Q psy4525 62 H------------PEVKNVINTFTKTGDNPRVNFYGNICLGQD---------ISLG---DL---TNAYHAVVLTYGADN 113 (388)
Q Consensus 62 ~------------~~~~~~~~~~~~~~~~~~i~~~~~~~v~~~---------~~~~---~~---~~~yd~lvlAtG~~~ 113 (388)
. .....+...+.+.+.+.|++++.++.+... +... ++ ...+|.||.|+|..+
T Consensus 84 ~~~~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s 162 (453)
T 3atr_A 84 MQTVWTVNGEGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFEDGYVKGAVLFNRRTNEELTVYSKVVVEATGYSR 162 (453)
T ss_dssp SSCEEEEEEEEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTTEEEEEECSEEEECCGGGC
T ss_pred CceEEeECCCcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEECCEEEEEEEEEcCCCceEEEEcCEEEECcCCch
Confidence 0 112345566666666678999988766321 2222 22 237899999999765
No 134
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.17 E-value=8.1e-06 Score=77.49 Aligned_cols=34 Identities=26% Similarity=0.428 Sum_probs=31.9
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCC
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLP 48 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~ 48 (388)
.++|+|||||++|+++|..|++ .|.+|+|+|+..
T Consensus 5 ~~dVvIIGgGi~Gl~~A~~La~--~G~~V~lle~~~ 38 (382)
T 1y56_B 5 KSEIVVIGGGIVGVTIAHELAK--RGEEVTVIEKRF 38 (382)
T ss_dssp BCSEEEECCSHHHHHHHHHHHH--TTCCEEEECSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHH--CCCeEEEEeCCC
Confidence 4799999999999999999999 899999999984
No 135
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.16 E-value=3.6e-06 Score=82.16 Aligned_cols=91 Identities=12% Similarity=0.095 Sum_probs=67.4
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCCCCCCcchhHHHHHHHHhhcCCCcEEEceEEEEE
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTKTGDNPRVNFYGNICLGQ 91 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 91 (388)
.+++++|||+|++|+.+|..|++ .|.+|+++++.+.+. |. ...++.+.+.+.+++.|++++.++.+..
T Consensus 166 ~~~~vvIiGgG~~g~e~A~~l~~--~g~~V~lv~~~~~~l--------~~--~~~~~~~~l~~~l~~~Gv~i~~~~~V~~ 233 (455)
T 2yqu_A 166 VPKRLIVVGGGVIGLELGVVWHR--LGAEVIVLEYMDRIL--------PT--MDLEVSRAAERVFKKQGLTIRTGVRVTA 233 (455)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSSC--------TT--SCHHHHHHHHHHHHHHTCEEECSCCEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHH--cCCEEEEEecCCccc--------cc--cCHHHHHHHHHHHHHCCCEEEECCEEEE
Confidence 35899999999999999999999 899999999986642 32 2345566666777777999998766532
Q ss_pred E--------eeeccc-ccccCEEEEeeCCCCC
Q psy4525 92 D--------ISLGDL-TNAYHAVVLTYGADND 114 (388)
Q Consensus 92 ~--------~~~~~~-~~~yd~lvlAtG~~~~ 114 (388)
. +...+. ...+|.||+|+|..+.
T Consensus 234 i~~~~~~v~v~~~~g~~i~~D~vv~A~G~~p~ 265 (455)
T 2yqu_A 234 VVPEAKGARVELEGGEVLEADRVLVAVGRRPY 265 (455)
T ss_dssp EEEETTEEEEEETTSCEEEESEEEECSCEEEC
T ss_pred EEEeCCEEEEEECCCeEEEcCEEEECcCCCcC
Confidence 1 222233 2379999999998763
No 136
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.15 E-value=4.9e-06 Score=82.31 Aligned_cols=101 Identities=16% Similarity=0.136 Sum_probs=66.6
Q ss_pred CCCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCc-----e---------eeCCC-----------------
Q psy4525 11 QLKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGL-----V---------RYGVA----------------- 59 (388)
Q Consensus 11 ~~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~-----~---------~~g~~----------------- 59 (388)
...++|+||||||+|+++|..|++ .|++|+|||+.+.++.. + ..|+.
T Consensus 9 ~~~~dVlIVGaGpaGl~~A~~La~--~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~ 86 (500)
T 2qa1_A 9 RSDAAVIVVGAGPAGMMLAGELRL--AGVEVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEVETSTQGHFGGL 86 (500)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHH--TTCCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSCCBCCEEEETTE
T ss_pred cCCCCEEEECcCHHHHHHHHHHHH--CCCCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhccccccccccce
Confidence 456899999999999999999999 89999999997654210 0 00110
Q ss_pred -------CC-C-----cchhHHHHHHHHhhcCCCcEEEceEEEEE--------Eeeeccc----ccccCEEEEeeCCCC
Q psy4525 60 -------PD-H-----PEVKNVINTFTKTGDNPRVNFYGNICLGQ--------DISLGDL----TNAYHAVVLTYGADN 113 (388)
Q Consensus 60 -------p~-~-----~~~~~~~~~~~~~~~~~~i~~~~~~~v~~--------~~~~~~~----~~~yd~lvlAtG~~~ 113 (388)
+. + .....+...+.+.+.+.+++++.++.+.. .++..+. ...+|+||.|.|..+
T Consensus 87 ~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~S 165 (500)
T 2qa1_A 87 PIDFGVLEGAWQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDGAGVTVEVRGPEGKHTLRAAYLVGCDGGRS 165 (500)
T ss_dssp EEEGGGSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECCCTTC
T ss_pred ecccccCCCCCCceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcCCeEEEEEEcCCCCEEEEeCEEEECCCcch
Confidence 00 0 01234555566666667898888776532 1223222 247899999999765
No 137
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.15 E-value=6.6e-06 Score=78.42 Aligned_cols=91 Identities=18% Similarity=0.145 Sum_probs=68.5
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCCCCCCcchhHHHHHHHHhhcCCCcEEEceEEEEE-
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTKTGDNPRVNFYGNICLGQ- 91 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~- 91 (388)
+++++|||+|+.|+.+|..|.+ .|.+|+++++.+.+. +.. ...++...+.+.+++.|++++.++.+..
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~--~g~~Vtlv~~~~~~~--------~~~-~~~~~~~~l~~~l~~~gv~i~~~~~v~~i 213 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSS--GGYQLDVVAPCEQVM--------PGL-LHPAAAKAVQAGLEGLGVRFHLGPVLASL 213 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESSSSSS--------TTT-SCHHHHHHHHHHHHTTTCEEEESCCEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHh--CCCeEEEEecCcchh--------hcc-cCHHHHHHHHHHHHHcCCEEEeCCEEEEE
Confidence 6899999999999999999999 899999999886542 211 2345667777778888999998765532
Q ss_pred -------Eeeecccc-cccCEEEEeeCCCCC
Q psy4525 92 -------DISLGDLT-NAYHAVVLTYGADND 114 (388)
Q Consensus 92 -------~~~~~~~~-~~yd~lvlAtG~~~~ 114 (388)
.+...+.+ ..+|.||+|+|..+.
T Consensus 214 ~~~~~~~~v~~~~g~~i~~d~vv~a~G~~p~ 244 (384)
T 2v3a_A 214 KKAGEGLEAHLSDGEVIPCDLVVSAVGLRPR 244 (384)
T ss_dssp EEETTEEEEEETTSCEEEESEEEECSCEEEC
T ss_pred EecCCEEEEEECCCCEEECCEEEECcCCCcC
Confidence 13333332 379999999997763
No 138
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.14 E-value=9.8e-07 Score=87.29 Aligned_cols=43 Identities=23% Similarity=0.461 Sum_probs=38.4
Q ss_pred CCCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCce
Q psy4525 11 QLKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLV 54 (388)
Q Consensus 11 ~~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~ 54 (388)
...+||+|||||++||+||..|++. .|.+|+|+|+++.+||.+
T Consensus 8 ~~~~DVvIIGaGisGLsaA~~L~k~-~G~~V~VlE~~~~~GG~~ 50 (513)
T 4gde_A 8 DISVDVLVIGAGPTGLGAAKRLNQI-DGPSWMIVDSNETPGGLA 50 (513)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHH-CCSCEEEEESSSSCCGGG
T ss_pred CCCCCEEEECCcHHHHHHHHHHHhh-CCCCEEEEECCCCCcCCe
Confidence 3457999999999999999999863 599999999999999976
No 139
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.14 E-value=5.8e-06 Score=79.58 Aligned_cols=92 Identities=18% Similarity=0.159 Sum_probs=69.2
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCCCCCCcchhHHHHHHHHhhcCCCcEEEceEEEEE
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTKTGDNPRVNFYGNICLGQ 91 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 91 (388)
..++|+|||+|+.|+.+|..|++ .|.+|+++++.+.+. |. ....++...+.+.+++.|++++.++.+..
T Consensus 144 ~~~~vvViGgG~~g~E~A~~l~~--~g~~Vtlv~~~~~~l--------~~-~~~~~~~~~l~~~l~~~GV~i~~~~~v~~ 212 (408)
T 2gqw_A 144 PQSRLLIVGGGVIGLELAATART--AGVHVSLVETQPRLM--------SR-AAPATLADFVARYHAAQGVDLRFERSVTG 212 (408)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESSSSSS--------TT-TSCHHHHHHHHHHHHHTTCEEEESCCEEE
T ss_pred cCCeEEEECCCHHHHHHHHHHHh--CCCEEEEEEeCCccc--------cc-ccCHHHHHHHHHHHHHcCcEEEeCCEEEE
Confidence 46899999999999999999999 899999999986642 21 12345666677778888999998866532
Q ss_pred ----Eeeecccc-cccCEEEEeeCCCCC
Q psy4525 92 ----DISLGDLT-NAYHAVVLTYGADND 114 (388)
Q Consensus 92 ----~~~~~~~~-~~yd~lvlAtG~~~~ 114 (388)
.+...++. ..+|.||+|+|..+.
T Consensus 213 i~~~~v~~~~g~~i~~D~vi~a~G~~p~ 240 (408)
T 2gqw_A 213 SVDGVVLLDDGTRIAADMVVVGIGVLAN 240 (408)
T ss_dssp EETTEEEETTSCEEECSEEEECSCEEEC
T ss_pred EECCEEEECCCCEEEcCEEEECcCCCcc
Confidence 23333332 379999999997763
No 140
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.13 E-value=6.3e-06 Score=80.72 Aligned_cols=91 Identities=13% Similarity=0.182 Sum_probs=68.8
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCCCCCCcchhHHHHHHHHhhcCCCcEEEceEEEEE
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTKTGDNPRVNFYGNICLGQ 91 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 91 (388)
.+++++|||+|++|+.+|..|++ .|.+|+++++.+.+. | ....++.+.+.+.+++.|++++.++.+..
T Consensus 168 ~~~~vvViGgG~~g~e~A~~l~~--~g~~Vtlv~~~~~~l--------~--~~~~~~~~~l~~~l~~~gV~i~~~~~v~~ 235 (464)
T 2eq6_A 168 LPKRLLVIGGGAVGLELGQVYRR--LGAEVTLIEYMPEIL--------P--QGDPETAALLRRALEKEGIRVRTKTKAVG 235 (464)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSSS--------T--TSCHHHHHHHHHHHHHTTCEEECSEEEEE
T ss_pred cCCEEEEECCCHHHHHHHHHHHH--CCCeEEEEEcCCccc--------c--ccCHHHHHHHHHHHHhcCCEEEcCCEEEE
Confidence 35899999999999999999999 899999999986642 2 12345666677778888999998876532
Q ss_pred --------Eeeec-c--c---ccccCEEEEeeCCCCC
Q psy4525 92 --------DISLG-D--L---TNAYHAVVLTYGADND 114 (388)
Q Consensus 92 --------~~~~~-~--~---~~~yd~lvlAtG~~~~ 114 (388)
.+... + + ...+|.||+|+|..|.
T Consensus 236 i~~~~~~~~v~~~~~~~g~~~~i~~D~vv~a~G~~p~ 272 (464)
T 2eq6_A 236 YEKKKDGLHVRLEPAEGGEGEEVVVDKVLVAVGRKPR 272 (464)
T ss_dssp EEEETTEEEEEEEETTCCSCEEEEESEEEECSCEEES
T ss_pred EEEeCCEEEEEEeecCCCceeEEEcCEEEECCCcccC
Confidence 12322 2 3 2379999999997763
No 141
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.13 E-value=7.3e-06 Score=82.55 Aligned_cols=35 Identities=20% Similarity=0.152 Sum_probs=32.5
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCC
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLP 48 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~ 48 (388)
..+||+|||||+||++||..+++ .|.+|+|+|+.+
T Consensus 20 ~~yDVIVIGgG~AGl~AAlaLAr--~G~kVlLIEk~~ 54 (641)
T 3cp8_A 20 HMYDVIVVGAGHAGCEAALAVAR--GGLHCLLITSDL 54 (641)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHH--TTCCEEEEESCG
T ss_pred CcCCEEEECccHHHHHHHHHHHH--CCCcEEEEEecc
Confidence 45899999999999999999999 899999999874
No 142
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.11 E-value=8.9e-06 Score=81.81 Aligned_cols=39 Identities=36% Similarity=0.498 Sum_probs=35.5
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCc
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGL 53 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~ 53 (388)
.++|+|||+|++|+++|..|++ .|.+|+|+|+.+.+||.
T Consensus 126 ~~~v~viG~G~aG~~aa~~~~~--~g~~v~~~e~~~~~~~~ 164 (572)
T 1d4d_A 126 TTDVVIIGSGGAGLAAAVSARD--AGAKVILLEKEPIPGGN 164 (572)
T ss_dssp ECSEEEECCSHHHHHHHHHHHS--SSCCEEEECSSSSSCTT
T ss_pred CCCEEEECCCHHHHHHHHHHHH--CCCcEEEEecCCCCCcc
Confidence 5799999999999999999999 89999999999877654
No 143
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.10 E-value=8.7e-06 Score=80.29 Aligned_cols=92 Identities=13% Similarity=0.122 Sum_probs=69.3
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCCCCCCcchhHHHHHHHHhhcCCCcEEEceEEEEE
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTKTGDNPRVNFYGNICLGQ 91 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 91 (388)
.+++|+|||+|+.|+.+|..|++ .|.+|+++++.+.+. |. ....++.+.+.+.+++.|++++.++.+..
T Consensus 193 ~~~~vvVIGgG~ig~E~A~~l~~--~g~~Vtlv~~~~~~l--------~~-~~~~~~~~~l~~~l~~~GV~i~~~~~v~~ 261 (490)
T 2bc0_A 193 DIKRVAVVGAGYIGVELAEAFQR--KGKEVVLIDVVDTCL--------AG-YYDRDLTDLMAKNMEEHGIQLAFGETVKE 261 (490)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESSSSTT--------TT-TSCHHHHHHHHHHHHTTTCEEEETCCEEE
T ss_pred CCceEEEECCCHHHHHHHHHHHH--CCCeEEEEEcccchh--------hh-HHHHHHHHHHHHHHHhCCeEEEeCCEEEE
Confidence 46899999999999999999999 899999999986542 21 12345667777888889999998766532
Q ss_pred E--------eeecccccccCEEEEeeCCCCC
Q psy4525 92 D--------ISLGDLTNAYHAVVLTYGADND 114 (388)
Q Consensus 92 ~--------~~~~~~~~~yd~lvlAtG~~~~ 114 (388)
. +..+.....+|.||+|+|..|.
T Consensus 262 i~~~~~v~~v~~~g~~i~~D~Vi~a~G~~p~ 292 (490)
T 2bc0_A 262 VAGNGKVEKIITDKNEYDVDMVILAVGFRPN 292 (490)
T ss_dssp EECSSSCCEEEESSCEEECSEEEECCCEEEC
T ss_pred EEcCCcEEEEEECCcEEECCEEEECCCCCcC
Confidence 1 2222223479999999997763
No 144
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.10 E-value=4e-06 Score=83.48 Aligned_cols=90 Identities=13% Similarity=0.120 Sum_probs=67.9
Q ss_pred CCCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCCCCCCcchhHHHHHHHHhhcCCCcEEEceEEEE
Q psy4525 11 QLKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTKTGDNPRVNFYGNICLG 90 (388)
Q Consensus 11 ~~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~ 90 (388)
..+++++|||||+.|+.+|..+++ .|.+||++++...+ |. ...++...+.+.+++.++.++.+..+.
T Consensus 221 ~lP~~lvIIGgG~IGlE~A~~~~~--lG~~VTii~~~~~L---------~~--~D~ei~~~l~~~l~~~gi~~~~~~~v~ 287 (542)
T 4b1b_A 221 KDPGKTLVVGASYVALECSGFLNS--LGYDVTVAVRSIVL---------RG--FDQQCAVKVKLYMEEQGVMFKNGILPK 287 (542)
T ss_dssp SCCCSEEEECCSHHHHHHHHHHHH--HTCCEEEEESSCSS---------TT--SCHHHHHHHHHHHHHTTCEEEETCCEE
T ss_pred cCCceEEEECCCHHHHHHHHHHHh--cCCeEEEecccccc---------cc--cchhHHHHHHHHHHhhcceeecceEEE
Confidence 456899999999999999999999 89999999875322 32 245677778888888999998876653
Q ss_pred EE--------eeeccc-ccccCEEEEeeCCCC
Q psy4525 91 QD--------ISLGDL-TNAYHAVVLTYGADN 113 (388)
Q Consensus 91 ~~--------~~~~~~-~~~yd~lvlAtG~~~ 113 (388)
.. +...+. ...+|.|++|+|..|
T Consensus 288 ~~~~~~~~~~v~~~~~~~~~~D~vLvAvGR~P 319 (542)
T 4b1b_A 288 KLTKMDDKILVEFSDKTSELYDTVLYAIGRKG 319 (542)
T ss_dssp EEEEETTEEEEEETTSCEEEESEEEECSCEEE
T ss_pred EEEecCCeEEEEEcCCCeEEEEEEEEcccccC
Confidence 21 222222 236899999999655
No 145
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.10 E-value=3.9e-07 Score=90.15 Aligned_cols=183 Identities=11% Similarity=0.021 Sum_probs=95.7
Q ss_pred ccCEEEEeeCCCCCCCCCCCCCCCCCeeecccccccccC------CCCccccCcCCCCCeEEEEcCChHHHHHHHHhccC
Q psy4525 101 AYHAVVLTYGADNDKKLNIPGEDGKNIISARSFVGWYNG------LPEDASLDLSLDCEEATILGQGNVAMDVARILLSP 174 (388)
Q Consensus 101 ~yd~lvlAtG~~~~~~~~i~g~~~~~v~~~~~~~~~~~~------~~~~~~~~~~~~~~~vvVIGgG~sg~e~a~~L~~~ 174 (388)
.||.+++++|+.+ +.+++++.+.++++........... +..... .......+|+|||||.+|+.+|..|+
T Consensus 37 ~~~~l~~~~g~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dVvIVGgG~aGl~aA~~La-- 112 (497)
T 2bry_A 37 SFQGLCRALGVES-GGGLSQYHKIKAQLNYWSAKSLWAKLDKRASQPVYQQ-GQACTNTKCLVVGAGPCGLRAAVELA-- 112 (497)
T ss_dssp HHHHHHHHHTCCT-TCHHHHHHHHHHTCCSTTTHHHHHHHHHHHTSGGGGG-GTTTTTCEEEEECCSHHHHHHHHHHH--
T ss_pred HHHHHHHHhCCCC-CCCcEeehhhHHHHHHHHHHHhhhhhhhhhccccccC-ccccCCCCEEEECccHHHHHHHHHHH--
Confidence 6889999999886 4555544333333332221110000 000000 11223578999999999999999886
Q ss_pred CcccccccCchhHHHhhhcCCCcEEEEEeecCccc----ccCCHHHHHHHhcCCCceEEecccccccchhhhccccchhh
Q psy4525 175 VDQLKSTDITEHSLEKLSTSRIKSVNLVGRRGALQ----VAFTIKEFREMTKLPHVQTVFRNEQLCGVHEASATLARPRK 250 (388)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~~~~----~~~~~~el~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 250 (388)
+.| .+|+++.+.+... ....+..++.+.... .... ... ........ -.+.
T Consensus 113 ------------------~~G-~~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g-~~~~-~~~---~~~~~~~~--~~~~ 166 (497)
T 2bry_A 113 ------------------LLG-ARVVLVEKRIKFSRHNVLHLWPFTIHDLRALG-AKKF-YGR---FCTGTLDH--ISIR 166 (497)
T ss_dssp ------------------HTT-CEEEEEESCSSCCCCCEEECCHHHHHHHHTTT-HHHH-CTT---TTCTTCCE--EEHH
T ss_pred ------------------HCC-CeEEEEEeccccCCCCcccCChhHHHHHHHcC-Cccc-ccc---cccccccc--CCHH
Confidence 344 4799999886542 112233332222111 0000 000 00000000 0123
Q ss_pred HHHHHHHhhCCCCCCCCCCceeEEEEecCcceeeeeCC-CCceeEEEEccCccccCCce--eEEecceEEEccccCCcc
Q psy4525 251 RLTELILKTSNPDESKSNCSKYFRPIFLRSPTEFKLND-NGAITGINFANQQALVTEDT--ELIPSGIAFRSIGYQSRC 326 (388)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~-~~~v~~v~~~~~~~~~~~~~--~~l~~D~Vi~a~G~~p~~ 326 (388)
.+...+...+. +.|+++++++.++++..++ ++....+.+.+ ..++ +++.+|.||.|+|..+..
T Consensus 167 ~l~~~L~~~~~--------~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~-----~~~g~~~~i~ad~VV~A~G~~S~~ 232 (497)
T 2bry_A 167 QLQLLLLKVAL--------LLGVEIHWGVKFTGLQPPPRKGSGWRAQLQP-----NPPAQLASYEFDVLISAAGGKFVP 232 (497)
T ss_dssp HHHHHHHHHHH--------HTTCEEEESCEEEEEECCCSTTCCBEEEEES-----CCCHHHHTCCBSEEEECCCTTCCC
T ss_pred HHHHHHHHHHH--------hCCCEEEeCCEEEEEEEecCCCCEEEEEEEE-----CCCCCEEEEEcCEEEECCCCCccc
Confidence 34444443321 4689999999999997532 23333444321 1023 468999999999998765
No 146
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.09 E-value=6.1e-06 Score=81.59 Aligned_cols=101 Identities=18% Similarity=0.207 Sum_probs=67.0
Q ss_pred CCCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCc-----e---------eeCCC-----------------
Q psy4525 11 QLKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGL-----V---------RYGVA----------------- 59 (388)
Q Consensus 11 ~~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~-----~---------~~g~~----------------- 59 (388)
...++|+||||||+|+++|..|++ .|++|+|||+.+.++.. + ..|+.
T Consensus 10 ~~~~dVlIVGaGpaGl~~A~~La~--~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~ 87 (499)
T 2qa2_A 10 RSDASVIVVGAGPAGLMLAGELRL--GGVDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPVETSTQGHFGGR 87 (499)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHH--TTCCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSCCEESEEEETTE
T ss_pred CCCCCEEEECcCHHHHHHHHHHHH--CCCCEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhccccccceecce
Confidence 356899999999999999999999 89999999987654210 0 00100
Q ss_pred -------C-CCc-----chhHHHHHHHHhhcCCCcEEEceEEEEE--------Eeeeccc----ccccCEEEEeeCCCC
Q psy4525 60 -------P-DHP-----EVKNVINTFTKTGDNPRVNFYGNICLGQ--------DISLGDL----TNAYHAVVLTYGADN 113 (388)
Q Consensus 60 -------p-~~~-----~~~~~~~~~~~~~~~~~i~~~~~~~v~~--------~~~~~~~----~~~yd~lvlAtG~~~ 113 (388)
+ .++ ....+...+.+.+.+.+++++.++.+.. .++..+. ...+|+||.|.|..+
T Consensus 88 ~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~S 166 (499)
T 2qa2_A 88 PVDFGVLEGAHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEGDHVVVEVEGPDGPRSLTTRYVVGCDGGRS 166 (499)
T ss_dssp EEEGGGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECSSCEEEEEECSSCEEEEEEEEEEECCCTTC
T ss_pred ecccccCCCCCCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCcEEEEeCEEEEccCccc
Confidence 0 010 1344555666666667899888776532 1233222 237899999999765
No 147
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=98.06 E-value=3.8e-06 Score=81.15 Aligned_cols=47 Identities=19% Similarity=0.180 Sum_probs=40.3
Q ss_pred CcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCce---eeCCCCCC
Q psy4525 14 PNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLV---RYGVAPDH 62 (388)
Q Consensus 14 ~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~---~~g~~p~~ 62 (388)
+||+|||||++|++||..|++ .|.+|+|+|+.+.+||.+ +.+|.|..
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~--~G~~V~vlE~~~~~GG~~~t~~~~cipg~ 51 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTN--AGKKVLLLEGGERLGGRAYSRESRNVPGL 51 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHH--TTCCEEEECSSSSSBTTCCEEECSSSTTC
T ss_pred CCEEEECCcHHHHHHHHHHHH--cCCeEEEEecCCCccCeecceeccCCCCc
Confidence 589999999999999999999 899999999998998876 33544443
No 148
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.06 E-value=5.7e-06 Score=80.89 Aligned_cols=91 Identities=12% Similarity=0.087 Sum_probs=67.8
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCCCCCCcchhHHHHHHHHhhcCCCcEEEceEEEEE
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTKTGDNPRVNFYGNICLGQ 91 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 91 (388)
.+++++|||||++|+.+|..|++ .|.+|+++++.+.+. |. ...++...+.+.+++.|++++.++.+..
T Consensus 170 ~~~~vvViGgG~~g~e~A~~l~~--~g~~Vtlv~~~~~~l--------~~--~~~~~~~~l~~~l~~~gv~i~~~~~v~~ 237 (458)
T 1lvl_A 170 LPQHLVVVGGGYIGLELGIAYRK--LGAQVSVVEARERIL--------PT--YDSELTAPVAESLKKLGIALHLGHSVEG 237 (458)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHH--HTCEEEEECSSSSSS--------TT--SCHHHHHHHHHHHHHHTCEEETTCEEEE
T ss_pred cCCeEEEECcCHHHHHHHHHHHH--CCCeEEEEEcCCccc--------cc--cCHHHHHHHHHHHHHCCCEEEECCEEEE
Confidence 45899999999999999999999 799999999987653 31 2344566666777778999998866532
Q ss_pred E----eeec--cc---ccccCEEEEeeCCCCC
Q psy4525 92 D----ISLG--DL---TNAYHAVVLTYGADND 114 (388)
Q Consensus 92 ~----~~~~--~~---~~~yd~lvlAtG~~~~ 114 (388)
. +.+. ++ ...+|.||+|+|..|.
T Consensus 238 i~~~~v~v~~~~G~~~~i~~D~vv~a~G~~p~ 269 (458)
T 1lvl_A 238 YENGCLLANDGKGGQLRLEADRVLVAVGRRPR 269 (458)
T ss_dssp EETTEEEEECSSSCCCEECCSCEEECCCEEEC
T ss_pred EEeCCEEEEECCCceEEEECCEEEECcCCCcC
Confidence 1 2222 22 2379999999998763
No 149
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.04 E-value=5.5e-06 Score=80.49 Aligned_cols=90 Identities=10% Similarity=0.098 Sum_probs=68.3
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCCCCCCcchhHHHHHHHHhhcCCCcEEEceEEEEE
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTKTGDNPRVNFYGNICLGQ 91 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 91 (388)
.+++++|||||+.|+.+|..+++ .|.+|+++++.+.+. |. ...++...+.+.+++.|++++.++.+..
T Consensus 146 ~~~~vvViGgG~ig~E~A~~l~~--~g~~Vtlv~~~~~ll--------~~--~d~~~~~~~~~~l~~~gV~i~~~~~v~~ 213 (437)
T 4eqs_A 146 QVDKVLVVGAGYVSLEVLENLYE--RGLHPTLIHRSDKIN--------KL--MDADMNQPILDELDKREIPYRLNEEINA 213 (437)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHH--HTCEEEEEESSSCCS--------TT--SCGGGGHHHHHHHHHTTCCEEESCCEEE
T ss_pred CCcEEEEECCccchhhhHHHHHh--cCCcceeeeeecccc--------cc--ccchhHHHHHHHhhccceEEEeccEEEE
Confidence 35799999999999999999999 899999999987643 21 1234455566677778999998877643
Q ss_pred ----Eeeecccc-cccCEEEEeeCCCC
Q psy4525 92 ----DISLGDLT-NAYHAVVLTYGADN 113 (388)
Q Consensus 92 ----~~~~~~~~-~~yd~lvlAtG~~~ 113 (388)
.+...+.+ ..+|.|++|+|..|
T Consensus 214 ~~~~~v~~~~g~~~~~D~vl~a~G~~P 240 (437)
T 4eqs_A 214 INGNEITFKSGKVEHYDMIIEGVGTHP 240 (437)
T ss_dssp EETTEEEETTSCEEECSEEEECCCEEE
T ss_pred ecCCeeeecCCeEEeeeeEEEEeceec
Confidence 24444443 37999999999766
No 150
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.03 E-value=3.1e-06 Score=80.89 Aligned_cols=87 Identities=18% Similarity=0.166 Sum_probs=67.3
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCCCCCCcchhHHHHHHHHhhcCCCcEEEceEEEEEE
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTKTGDNPRVNFYGNICLGQD 92 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~~ 92 (388)
.++|+|||+|+.|+.+|..|++ .|.+|+++++.+.+. +. ....++...+.+.+++.|++++.++.+...
T Consensus 146 ~~~vvVIGgG~~g~E~A~~l~~--~g~~Vtvv~~~~~~l--------~~-~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i 214 (385)
T 3klj_A 146 KGKAFIIGGGILGIELAQAIID--SGTPASIGIILEYPL--------ER-QLDRDGGLFLKDKLDRLGIKIYTNSNFEEM 214 (385)
T ss_dssp HSCEEEECCSHHHHHHHHHHHH--HTCCEEEECSSSSSC--------TT-TSCHHHHHHHHHHHHTTTCEEECSCCGGGC
T ss_pred CCeEEEECCCHHHHHHHHHHHh--CCCeEEEEEcCCccc--------hh-hcCHHHHHHHHHHHHhCCCEEEeCCEEEEc
Confidence 4799999999999999999999 799999999987642 21 123456667777888899999988765321
Q ss_pred eeecccccccCEEEEeeCCCCC
Q psy4525 93 ISLGDLTNAYHAVVLTYGADND 114 (388)
Q Consensus 93 ~~~~~~~~~yd~lvlAtG~~~~ 114 (388)
.....+|.||+|+|..|.
T Consensus 215 ----g~~~~~D~vv~a~G~~p~ 232 (385)
T 3klj_A 215 ----GDLIRSSCVITAVGVKPN 232 (385)
T ss_dssp ----HHHHHHSEEEECCCEEEC
T ss_pred ----CeEEecCeEEECcCcccC
Confidence 223479999999997763
No 151
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.03 E-value=1.2e-05 Score=78.37 Aligned_cols=91 Identities=15% Similarity=0.138 Sum_probs=67.9
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCCCCCCcchhHHHHHHHHhhcCCCcEEEceEEEEE
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTKTGDNPRVNFYGNICLGQ 91 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 91 (388)
.+++++|||+|+.|+.+|..|++ .|.+|+++++.+.+. |. ...++...+.+.+++.|++++.++.+..
T Consensus 169 ~~~~vvViGgG~~g~e~A~~l~~--~g~~Vtlv~~~~~~l--------~~--~~~~~~~~l~~~l~~~gv~i~~~~~v~~ 236 (455)
T 1ebd_A 169 VPKSLVVIGGGYIGIELGTAYAN--FGTKVTILEGAGEIL--------SG--FEKQMAAIIKKRLKKKGVEVVTNALAKG 236 (455)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHH--TTCEEEEEESSSSSS--------TT--SCHHHHHHHHHHHHHTTCEEEESEEEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHH--cCCcEEEEEcCCccc--------cc--cCHHHHHHHHHHHHHCCCEEEeCCEEEE
Confidence 45899999999999999999999 899999999986643 32 2345666677777788999998876532
Q ss_pred E--------eeec---cc-ccccCEEEEeeCCCCC
Q psy4525 92 D--------ISLG---DL-TNAYHAVVLTYGADND 114 (388)
Q Consensus 92 ~--------~~~~---~~-~~~yd~lvlAtG~~~~ 114 (388)
. ++.. +. ...+|.||+|+|..|.
T Consensus 237 i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~ 271 (455)
T 1ebd_A 237 AEEREDGVTVTYEANGETKTIDADYVLVTVGRRPN 271 (455)
T ss_dssp EEEETTEEEEEEEETTEEEEEEESEEEECSCEEES
T ss_pred EEEeCCeEEEEEEeCCceeEEEcCEEEECcCCCcc
Confidence 1 2221 11 2379999999997763
No 152
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.02 E-value=9.7e-06 Score=79.41 Aligned_cols=90 Identities=12% Similarity=0.122 Sum_probs=68.7
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCCCCCCcchhHHHHHHHHhhcCCCcEEEceEEEEE
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTKTGDNPRVNFYGNICLGQ 91 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 91 (388)
.+++++|||+|+.|+.+|..+.+ .+.+|+++++.+.+. | ...++...+.+.+++.|++++.++.+..
T Consensus 175 ~~~~vvViGgG~~g~E~A~~l~~--~g~~Vtlv~~~~~~l--------~---~~~~~~~~l~~~l~~~Gv~i~~~~~v~~ 241 (467)
T 1zk7_A 175 IPERLAVIGSSVVALELAQAFAR--LGSKVTVLARNTLFF--------R---EDPAIGEAVTAAFRAEGIEVLEHTQASQ 241 (467)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSCTTT--------T---SCHHHHHHHHHHHHHTTCEEETTCCEEE
T ss_pred cCCEEEEECCCHHHHHHHHHHHH--cCCEEEEEEECCccC--------C---CCHHHHHHHHHHHHhCCCEEEcCCEEEE
Confidence 46899999999999999999999 899999999986542 3 2345667777778888999998766532
Q ss_pred E--------eeecccccccCEEEEeeCCCCC
Q psy4525 92 D--------ISLGDLTNAYHAVVLTYGADND 114 (388)
Q Consensus 92 ~--------~~~~~~~~~yd~lvlAtG~~~~ 114 (388)
. +..++....+|.||+|+|..+.
T Consensus 242 i~~~~~~~~v~~~~~~i~aD~Vv~a~G~~p~ 272 (467)
T 1zk7_A 242 VAHMDGEFVLTTTHGELRADKLLVATGRTPN 272 (467)
T ss_dssp EEEETTEEEEEETTEEEEESEEEECSCEEES
T ss_pred EEEeCCEEEEEECCcEEEcCEEEECCCCCcC
Confidence 1 2233333479999999997663
No 153
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.02 E-value=1.2e-05 Score=78.98 Aligned_cols=91 Identities=14% Similarity=0.093 Sum_probs=68.4
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCCCCCCcchhHHHHHHHHhhcCCCcEEEceEEEEE
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTKTGDNPRVNFYGNICLGQ 91 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 91 (388)
.+++++|||+|+.|+.+|..|++ .|.+|+++++.+.+. | ....++...+.+.+++.|++++.++.+..
T Consensus 182 ~~~~vvViGgG~~g~e~A~~l~~--~g~~Vtlv~~~~~~l--------~--~~~~~~~~~l~~~l~~~gv~i~~~~~v~~ 249 (478)
T 1v59_A 182 IPKRLTIIGGGIIGLEMGSVYSR--LGSKVTVVEFQPQIG--------A--SMDGEVAKATQKFLKKQGLDFKLSTKVIS 249 (478)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSSS--------S--SSCHHHHHHHHHHHHHTTCEEECSEEEEE
T ss_pred cCceEEEECCCHHHHHHHHHHHH--cCCEEEEEEeCCccc--------c--ccCHHHHHHHHHHHHHCCCEEEeCCEEEE
Confidence 36899999999999999999999 899999999987653 2 12345666777778888999998876532
Q ss_pred E----------eeec-----cc-ccccCEEEEeeCCCCC
Q psy4525 92 D----------ISLG-----DL-TNAYHAVVLTYGADND 114 (388)
Q Consensus 92 ~----------~~~~-----~~-~~~yd~lvlAtG~~~~ 114 (388)
. +... +. ...+|.||+|+|..|.
T Consensus 250 i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~ 288 (478)
T 1v59_A 250 AKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVGRRPY 288 (478)
T ss_dssp EEEETTTTEEEEEEEETTTTEEEEEEESEEEECSCEEEC
T ss_pred EEEecCCCeEEEEEEEcCCCCceEEECCEEEECCCCCcC
Confidence 1 1222 11 2379999999997763
No 154
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.02 E-value=5.3e-06 Score=78.68 Aligned_cols=42 Identities=24% Similarity=0.281 Sum_probs=39.1
Q ss_pred CCCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCC-CCCCCce
Q psy4525 11 QLKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKL-PVPFGLV 54 (388)
Q Consensus 11 ~~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~-~~~gg~~ 54 (388)
..+++|+|||||++||++|..|.+ .|++|+|+|+. +.+||.+
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~--~G~~V~VlE~~~~~vGGr~ 84 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTR--AGHDVTILEANANRVGGRI 84 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHH--TSCEEEEECSCSSCCBTTC
T ss_pred CCCceEEEECCCHHHHHHHHHHHH--CCCcEEEEeccccccCCce
Confidence 456899999999999999999999 89999999999 9999977
No 155
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=98.01 E-value=5.7e-06 Score=79.82 Aligned_cols=41 Identities=22% Similarity=0.344 Sum_probs=38.2
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCC-CcEEEEcCCCCCCCce
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQ-STVDIYEKLPVPFGLV 54 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g-~~v~lie~~~~~gg~~ 54 (388)
.+++|+|||||++|++||..|++ .| .+|+|+|+.+.+||.+
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~--~g~~~v~v~E~~~~~GG~~ 46 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQ--AGFHDYTILERTDHVGGKC 46 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHH--TTCCCEEEECSSSCSSTTC
T ss_pred CCCCEEEECcCHHHHHHHHHHHh--CCCCcEEEEECCCCCCCcc
Confidence 45799999999999999999999 89 8999999999999876
No 156
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.01 E-value=2.5e-05 Score=76.14 Aligned_cols=92 Identities=16% Similarity=0.230 Sum_probs=70.1
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCCCCCCcchhHHHHHHHHhhcCCCcEEEceEEEEE
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTKTGDNPRVNFYGNICLGQ 91 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 91 (388)
.+++++|||+|+.|+.+|..+.+ .|.+|+++++.+.+. |. ....++...+.+.+++.|++++.++.+..
T Consensus 146 ~~~~vvViGgG~~g~E~A~~l~~--~g~~Vtlv~~~~~~l--------~~-~~d~~~~~~l~~~l~~~GV~i~~~~~v~~ 214 (452)
T 3oc4_A 146 NSQTVAVIGAGPIGMEAIDFLVK--MKKTVHVFESLENLL--------PK-YFDKEMVAEVQKSLEKQAVIFHFEETVLG 214 (452)
T ss_dssp TCSEEEEECCSHHHHHHHHHHHH--TTCEEEEEESSSSSS--------TT-TCCHHHHHHHHHHHHTTTEEEEETCCEEE
T ss_pred cCCEEEEECCCHHHHHHHHHHHh--CCCeEEEEEccCccc--------cc-cCCHHHHHHHHHHHHHcCCEEEeCCEEEE
Confidence 45899999999999999999999 899999999986542 21 12355677778888889999998766532
Q ss_pred E--------eeecccccccCEEEEeeCCCCC
Q psy4525 92 D--------ISLGDLTNAYHAVVLTYGADND 114 (388)
Q Consensus 92 ~--------~~~~~~~~~yd~lvlAtG~~~~ 114 (388)
. +..++....+|.||+|+|..|.
T Consensus 215 i~~~~~~v~v~~~~g~i~aD~Vv~A~G~~p~ 245 (452)
T 3oc4_A 215 IEETANGIVLETSEQEISCDSGIFALNLHPQ 245 (452)
T ss_dssp EEECSSCEEEEESSCEEEESEEEECSCCBCC
T ss_pred EEccCCeEEEEECCCEEEeCEEEECcCCCCC
Confidence 1 2333334579999999998764
No 157
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.00 E-value=1.7e-05 Score=76.47 Aligned_cols=91 Identities=15% Similarity=0.191 Sum_probs=69.0
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCCCCCCcchhHHHHHHHHhhcCCCcEEEceEEEEE-
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTKTGDNPRVNFYGNICLGQ- 91 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~- 91 (388)
.++++|||+|+.|+.+|..+.+ .+.+|+++++.+.+. +. ....++...+.+.+++.|++++.++.+..
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~--~g~~Vtvv~~~~~~l--------~~-~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i 220 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTK--FGVNVTLLEALPRVL--------AR-VAGEALSEFYQAEHRAHGVDLRTGAAMDCI 220 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESSSSTT--------TT-TSCHHHHHHHHHHHHHTTCEEEETCCEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHh--cCCeEEEEecCCchh--------hh-hcCHHHHHHHHHHHHhCCCEEEECCEEEEE
Confidence 6899999999999999999999 899999999986642 11 12345667777778888999997766532
Q ss_pred --------Eeeecccc-cccCEEEEeeCCCCC
Q psy4525 92 --------DISLGDLT-NAYHAVVLTYGADND 114 (388)
Q Consensus 92 --------~~~~~~~~-~~yd~lvlAtG~~~~ 114 (388)
.+.+.+++ ..+|.||+|+|..+.
T Consensus 221 ~~~~~~v~~v~l~dG~~i~aD~Vv~a~G~~p~ 252 (415)
T 3lxd_A 221 EGDGTKVTGVRMQDGSVIPADIVIVGIGIVPC 252 (415)
T ss_dssp EESSSBEEEEEESSSCEEECSEEEECSCCEES
T ss_pred EecCCcEEEEEeCCCCEEEcCEEEECCCCccC
Confidence 13333333 379999999998764
No 158
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.00 E-value=1e-05 Score=79.65 Aligned_cols=91 Identities=15% Similarity=0.211 Sum_probs=69.0
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCCCCCCcchhHHHHHHHHhhcCCCcEEEceEEEEE
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTKTGDNPRVNFYGNICLGQ 91 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 91 (388)
.+++++|||||+.|+.+|..|++ .|.+|+++++.+.+. |. ...++...+.+.+++.|++++.++.+..
T Consensus 184 ~~~~vvViGgG~ig~E~A~~l~~--~G~~Vtlv~~~~~~l--------~~--~~~~~~~~l~~~l~~~gV~i~~~~~v~~ 251 (482)
T 1ojt_A 184 VPGKLLIIGGGIIGLEMGTVYST--LGSRLDVVEMMDGLM--------QG--ADRDLVKVWQKQNEYRFDNIMVNTKTVA 251 (482)
T ss_dssp CCSEEEEESCSHHHHHHHHHHHH--HTCEEEEECSSSSSS--------TT--SCHHHHHHHHHHHGGGEEEEECSCEEEE
T ss_pred cCCeEEEECCCHHHHHHHHHHHH--cCCeEEEEEECCccc--------cc--cCHHHHHHHHHHHHhcCCEEEECCEEEE
Confidence 36899999999999999999999 799999999986642 22 2445666777788888999998866532
Q ss_pred --------Eeeecc----c-ccccCEEEEeeCCCCC
Q psy4525 92 --------DISLGD----L-TNAYHAVVLTYGADND 114 (388)
Q Consensus 92 --------~~~~~~----~-~~~yd~lvlAtG~~~~ 114 (388)
.+...+ . ...+|.||+|+|..|+
T Consensus 252 i~~~~~~~~v~~~~~~~~g~~~~~D~vv~a~G~~p~ 287 (482)
T 1ojt_A 252 VEPKEDGVYVTFEGANAPKEPQRYDAVLVAAGRAPN 287 (482)
T ss_dssp EEEETTEEEEEEESSSCCSSCEEESCEEECCCEEEC
T ss_pred EEEcCCeEEEEEeccCCCceEEEcCEEEECcCCCcC
Confidence 123322 2 2379999999997763
No 159
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=97.99 E-value=1.3e-05 Score=78.52 Aligned_cols=91 Identities=14% Similarity=0.107 Sum_probs=68.3
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCCCCCCcchhHHHHHHHHhhcCCCcEEEceEEEEE
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTKTGDNPRVNFYGNICLGQ 91 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 91 (388)
.+++++|||+|+.|+.+|..|++ .|.+|+++++.+.+. +. ...++...+.+.+++.|++++.++.+..
T Consensus 165 ~~~~vvVvGgG~~g~e~A~~l~~--~G~~Vtlv~~~~~~l--------~~--~~~~~~~~l~~~l~~~gv~i~~~~~v~~ 232 (463)
T 2r9z_A 165 QPKRVAIIGAGYIGIELAGLLRS--FGSEVTVVALEDRLL--------FQ--FDPLLSATLAENMHAQGIETHLEFAVAA 232 (463)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSSS--------TT--SCHHHHHHHHHHHHHTTCEEESSCCEEE
T ss_pred cCCEEEEECCCHHHHHHHHHHHh--cCCEEEEEEcCCccc--------cc--cCHHHHHHHHHHHHHCCCEEEeCCEEEE
Confidence 45799999999999999999999 899999999886542 21 2334556667777788999998765421
Q ss_pred --------Eeeecccc--cccCEEEEeeCCCCC
Q psy4525 92 --------DISLGDLT--NAYHAVVLTYGADND 114 (388)
Q Consensus 92 --------~~~~~~~~--~~yd~lvlAtG~~~~ 114 (388)
.+...+++ ..+|.||+|+|..|.
T Consensus 233 i~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~ 265 (463)
T 2r9z_A 233 LERDAQGTTLVAQDGTRLEGFDSVIWAVGRAPN 265 (463)
T ss_dssp EEEETTEEEEEETTCCEEEEESEEEECSCEEES
T ss_pred EEEeCCeEEEEEeCCcEEEEcCEEEECCCCCcC
Confidence 23333443 489999999997763
No 160
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=97.99 E-value=3.5e-06 Score=83.67 Aligned_cols=41 Identities=24% Similarity=0.267 Sum_probs=38.1
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCC-CcEEEEcCCCCCCCce
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQ-STVDIYEKLPVPFGLV 54 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g-~~v~lie~~~~~gg~~ 54 (388)
..++|+|||||+|||+||..|.+ .| .+|+|+|+.+.+||.+
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~--~G~~~V~VlEa~~riGGr~ 48 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQ--NGIQDCLVLEARDRVGGRL 48 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHH--TTCCSEEEECSSSSSBTTC
T ss_pred CCCcEEEECCCHHHHHHHHHHHh--cCCCCEEEEeCCCCCCCce
Confidence 34799999999999999999999 89 9999999999999976
No 161
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=97.99 E-value=5.6e-06 Score=80.80 Aligned_cols=42 Identities=14% Similarity=0.030 Sum_probs=39.1
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCcee
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVR 55 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~ 55 (388)
..+||+|||||++|++||..|++ .|.+|+++|+++.+||.+.
T Consensus 10 ~~~dvvVIGaG~~GL~aA~~La~--~G~~V~vlE~~~~~GG~~~ 51 (453)
T 2bcg_G 10 TDYDVIVLGTGITECILSGLLSV--DGKKVLHIDKQDHYGGEAA 51 (453)
T ss_dssp CBCSEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSSCGGGC
T ss_pred ccCCEEEECcCHHHHHHHHHHHH--CCCeEEEEeCCCCCCcccc
Confidence 45899999999999999999999 8999999999999999863
No 162
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=97.99 E-value=8.8e-06 Score=78.18 Aligned_cols=36 Identities=22% Similarity=0.418 Sum_probs=32.0
Q ss_pred CcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCC
Q psy4525 14 PNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPV 49 (388)
Q Consensus 14 ~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~ 49 (388)
+||+|||||++|+++|..|++..+|.+|+|+|+...
T Consensus 37 ~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~ 72 (405)
T 3c4n_A 37 FDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGL 72 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCS
T ss_pred CCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCC
Confidence 689999999999999999999333999999998753
No 163
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=97.99 E-value=1.7e-05 Score=76.20 Aligned_cols=92 Identities=17% Similarity=0.187 Sum_probs=69.1
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCCCCCCcchhHHHHHHHHhhcCCCcEEEceEEEEE
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTKTGDNPRVNFYGNICLGQ 91 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 91 (388)
..++++|||+|+.|+.+|..+.+ .+.+|+++++.+.+. +. ....++...+.+.+++.|++++.++.+..
T Consensus 141 ~~~~vvViGgG~~g~e~A~~l~~--~g~~Vtvv~~~~~~~--------~~-~~~~~~~~~l~~~l~~~GV~i~~~~~v~~ 209 (404)
T 3fg2_P 141 DKKHVVVIGAGFIGLEFAATARA--KGLEVDVVELAPRVM--------AR-VVTPEISSYFHDRHSGAGIRMHYGVRATE 209 (404)
T ss_dssp GCSEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSTT--------TT-TSCHHHHHHHHHHHHHTTCEEECSCCEEE
T ss_pred cCCeEEEECCCHHHHHHHHHHHh--CCCEEEEEeCCCcch--------hh-ccCHHHHHHHHHHHHhCCcEEEECCEEEE
Confidence 35799999999999999999999 899999999886542 11 12345666777778888999998765522
Q ss_pred ---------Eeeecccc-cccCEEEEeeCCCCC
Q psy4525 92 ---------DISLGDLT-NAYHAVVLTYGADND 114 (388)
Q Consensus 92 ---------~~~~~~~~-~~yd~lvlAtG~~~~ 114 (388)
.+.+.+++ ..+|.||+|+|..+.
T Consensus 210 i~~~~~~v~~V~~~dG~~i~aD~Vv~a~G~~p~ 242 (404)
T 3fg2_P 210 IAAEGDRVTGVVLSDGNTLPCDLVVVGVGVIPN 242 (404)
T ss_dssp EEEETTEEEEEEETTSCEEECSEEEECCCEEEC
T ss_pred EEecCCcEEEEEeCCCCEEEcCEEEECcCCccC
Confidence 13333443 379999999998763
No 164
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.98 E-value=9.7e-06 Score=79.74 Aligned_cols=91 Identities=15% Similarity=0.149 Sum_probs=68.2
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCCCCCCcchhHHHHHHHHhhcCCCcEEEceEEEEE
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTKTGDNPRVNFYGNICLGQ 91 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 91 (388)
.+++|+|||+|++|+.+|..|++ .|.+|+++++.+.+. | ....++...+.+.+++.|++++.++.+..
T Consensus 185 ~~~~vvViGgG~~g~e~A~~l~~--~g~~Vtlv~~~~~~l--------~--~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~ 252 (480)
T 3cgb_A 185 KVEDVTIIGGGAIGLEMAETFVE--LGKKVRMIERNDHIG--------T--IYDGDMAEYIYKEADKHHIEILTNENVKA 252 (480)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHH--TTCEEEEECCGGGTT--------S--SSCHHHHHHHHHHHHHTTCEEECSCCEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHh--cCCeEEEEEeCCchh--------h--cCCHHHHHHHHHHHHHcCcEEEcCCEEEE
Confidence 56899999999999999999999 899999999886543 2 12345666777778888999997765532
Q ss_pred E--------eeecccccccCEEEEeeCCCCC
Q psy4525 92 D--------ISLGDLTNAYHAVVLTYGADND 114 (388)
Q Consensus 92 ~--------~~~~~~~~~yd~lvlAtG~~~~ 114 (388)
. +..++....+|.||+|+|..+.
T Consensus 253 i~~~~~v~~v~~~~~~i~~D~vi~a~G~~p~ 283 (480)
T 3cgb_A 253 FKGNERVEAVETDKGTYKADLVLVSVGVKPN 283 (480)
T ss_dssp EEESSBEEEEEETTEEEECSEEEECSCEEES
T ss_pred EEcCCcEEEEEECCCEEEcCEEEECcCCCcC
Confidence 1 2223333479999999997763
No 165
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=97.98 E-value=7.7e-06 Score=78.75 Aligned_cols=92 Identities=15% Similarity=0.011 Sum_probs=68.7
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCCCCCCcchhHHHHHHHHhhcCCCcEEEceEEEEE
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTKTGDNPRVNFYGNICLGQ 91 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 91 (388)
..++++|||+|+.|+.+|..+.+ .+.+|+++++.+.+... ....++...+.+.+++.|++++.++.+..
T Consensus 142 ~~~~vvViGgG~~g~E~A~~l~~--~g~~Vtvv~~~~~~l~~---------~~~~~~~~~l~~~l~~~GV~i~~~~~v~~ 210 (410)
T 3ef6_A 142 SATRLLIVGGGLIGCEVATTARK--LGLSVTILEAGDELLVR---------VLGRRIGAWLRGLLTELGVQVELGTGVVG 210 (410)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSSSHH---------HHCHHHHHHHHHHHHHHTCEEECSCCEEE
T ss_pred cCCeEEEECCCHHHHHHHHHHHh--CCCeEEEEecCCccchh---------hcCHHHHHHHHHHHHHCCCEEEeCCEEEE
Confidence 46899999999999999999999 89999999988654210 12345666677777788999998766532
Q ss_pred --------Eeeecccc-cccCEEEEeeCCCCC
Q psy4525 92 --------DISLGDLT-NAYHAVVLTYGADND 114 (388)
Q Consensus 92 --------~~~~~~~~-~~yd~lvlAtG~~~~ 114 (388)
.+.+.+++ ..+|.||+|+|..+.
T Consensus 211 i~~~~~~~~v~~~dg~~i~aD~Vv~a~G~~p~ 242 (410)
T 3ef6_A 211 FSGEGQLEQVMASDGRSFVADSALICVGAEPA 242 (410)
T ss_dssp EECSSSCCEEEETTSCEEECSEEEECSCEEEC
T ss_pred EeccCcEEEEEECCCCEEEcCEEEEeeCCeec
Confidence 13333333 379999999998763
No 166
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=97.98 E-value=1.1e-05 Score=78.53 Aligned_cols=91 Identities=16% Similarity=0.230 Sum_probs=67.7
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCCCCCCcchhHHHHHHHHhhcCCCcEEEceEEEEE
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTKTGDNPRVNFYGNICLGQ 91 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 91 (388)
.+++++|||+|+.|+.+|..|.+ .|.+|+++++.+.+. |. ...++...+.+.+++.|++++.++.+..
T Consensus 166 ~~~~vvViGgG~~g~e~A~~l~~--~g~~Vtlv~~~~~~l--------~~--~~~~~~~~l~~~l~~~Gv~i~~~~~v~~ 233 (450)
T 1ges_A 166 LPERVAVVGAGYIGVELGGVING--LGAKTHLFEMFDAPL--------PS--FDPMISETLVEVMNAEGPQLHTNAIPKA 233 (450)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSSS--------TT--SCHHHHHHHHHHHHHHSCEEECSCCEEE
T ss_pred cCCeEEEECCCHHHHHHHHHHHh--cCCEEEEEEeCCchh--------hh--hhHHHHHHHHHHHHHCCCEEEeCCEEEE
Confidence 46899999999999999999999 899999999886542 21 2344666677777778999998765532
Q ss_pred ---------Eeeecccc-cccCEEEEeeCCCCC
Q psy4525 92 ---------DISLGDLT-NAYHAVVLTYGADND 114 (388)
Q Consensus 92 ---------~~~~~~~~-~~yd~lvlAtG~~~~ 114 (388)
.+...+++ ..+|.||+|+|..|.
T Consensus 234 i~~~~~~~~~v~~~~g~~i~~D~vv~a~G~~p~ 266 (450)
T 1ges_A 234 VVKNTDGSLTLELEDGRSETVDCLIWAIGREPA 266 (450)
T ss_dssp EEECTTSCEEEEETTSCEEEESEEEECSCEEES
T ss_pred EEEeCCcEEEEEECCCcEEEcCEEEECCCCCcC
Confidence 12233332 379999999997763
No 167
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=97.97 E-value=5.7e-06 Score=82.16 Aligned_cols=40 Identities=25% Similarity=0.265 Sum_probs=37.8
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCce
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLV 54 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~ 54 (388)
.++|+|||||+||++||..|++ .|++|+|+|+++.+||.+
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~--~G~~V~vlE~~~~~GGr~ 43 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHD--SGLNVVVLEARDRVGGRT 43 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHH--TTCCEEEECSSSSSBTTC
T ss_pred CceEEEECCCHHHHHHHHHHHH--CCCCEEEEeCCCCCCCce
Confidence 4799999999999999999999 899999999999999876
No 168
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=97.95 E-value=8.3e-06 Score=80.26 Aligned_cols=42 Identities=31% Similarity=0.448 Sum_probs=38.8
Q ss_pred CCCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCce
Q psy4525 11 QLKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLV 54 (388)
Q Consensus 11 ~~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~ 54 (388)
...++|+|||||++||+||..|++ .|.+|+|+|+.+.+||.+
T Consensus 9 ~~~~~v~IIGaG~aGl~aA~~L~~--~g~~v~v~E~~~~~GG~~ 50 (489)
T 2jae_A 9 KGSHSVVVLGGGPAGLCSAFELQK--AGYKVTVLEARTRPGGRV 50 (489)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSSCTTC
T ss_pred cCCCCEEEECCCHHHHHHHHHHHH--CCCCEEEEeccCCCCCce
Confidence 456899999999999999999999 899999999999999865
No 169
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=97.95 E-value=6.4e-06 Score=79.44 Aligned_cols=39 Identities=18% Similarity=0.272 Sum_probs=36.7
Q ss_pred CcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCce
Q psy4525 14 PNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLV 54 (388)
Q Consensus 14 ~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~ 54 (388)
+||+|||||++|+++|..|++ .|.+|+|+|+++.+||.+
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~--~G~~V~vlE~~~~~GG~~ 39 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLAR--NGHEIIVLEKSAMIGGRF 39 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHH--TTCEEEEECSSSSSCTTS
T ss_pred CcEEEECCCHHHHHHHHHHHH--CCCeEEEEeCCCCCCcee
Confidence 489999999999999999999 899999999999998876
No 170
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=97.95 E-value=2.8e-05 Score=68.68 Aligned_cols=46 Identities=9% Similarity=0.076 Sum_probs=33.2
Q ss_pred eeEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEecceEEEccccCCcc
Q psy4525 271 KYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPSGIAFRSIGYQSRC 326 (388)
Q Consensus 271 ~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~p~~ 326 (388)
.|++++ +..++++..+ ++.+..+.+ .+++++.||.||+|+|..++.
T Consensus 82 ~gv~i~-~~~v~~i~~~-~~~v~~v~~--------~~g~~i~a~~VV~A~G~~s~~ 127 (232)
T 2cul_A 82 RPLHLF-QATATGLLLE-GNRVVGVRT--------WEGPPARGEKVVLAVGSFLGA 127 (232)
T ss_dssp TTEEEE-ECCEEEEEEE-TTEEEEEEE--------TTSCCEECSEEEECCTTCSSC
T ss_pred CCcEEE-EeEEEEEEEe-CCEEEEEEE--------CCCCEEECCEEEECCCCChhh
Confidence 388888 5688888764 355555654 334579999999999997654
No 171
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.94 E-value=2.8e-05 Score=76.83 Aligned_cols=90 Identities=19% Similarity=0.181 Sum_probs=68.5
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCCCCCCcchhHHHHHHHHhhcCCCcEEEceEEEEE-
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTKTGDNPRVNFYGNICLGQ- 91 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~- 91 (388)
+++++|||+|+.|+.+|..|++ .|.+|+++++.+.+. |. ...++...+.+.+++.|++++.++.+..
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~--~g~~Vtlv~~~~~~l--------~~--~d~~~~~~l~~~l~~~gv~i~~~~~v~~i 243 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKR--LGIDSYIFARGNRIL--------RK--FDESVINVLENDMKKNNINIVTFADVVEI 243 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHT--TTCEEEEECSSSSSC--------TT--SCHHHHHHHHHHHHHTTCEEECSCCEEEE
T ss_pred CCeEEEECChHHHHHHHHHHHH--cCCeEEEEecCCccC--------cc--cchhhHHHHHHHHHhCCCEEEECCEEEEE
Confidence 6899999999999999999999 899999999986642 21 2345666777778888999998765532
Q ss_pred --------Eeeecccc--cccCEEEEeeCCCCC
Q psy4525 92 --------DISLGDLT--NAYHAVVLTYGADND 114 (388)
Q Consensus 92 --------~~~~~~~~--~~yd~lvlAtG~~~~ 114 (388)
.+...+++ ..+|.||+|+|..|.
T Consensus 244 ~~~~~~~~~v~~~~g~~~~~~D~vi~a~G~~p~ 276 (500)
T 1onf_A 244 KKVSDKNLSIHLSDGRIYEHFDHVIYCVGRSPD 276 (500)
T ss_dssp EESSTTCEEEEETTSCEEEEESEEEECCCBCCT
T ss_pred EEcCCceEEEEECCCcEEEECCEEEECCCCCcC
Confidence 12333333 479999999998774
No 172
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=97.93 E-value=7.2e-06 Score=79.00 Aligned_cols=39 Identities=26% Similarity=0.574 Sum_probs=36.7
Q ss_pred CcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCce
Q psy4525 14 PNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLV 54 (388)
Q Consensus 14 ~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~ 54 (388)
++|+|||||.+|++||..|++ .|.+|+|+|+++.+||..
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~--~G~~V~vlE~~~~~GG~~ 39 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSK--AGHEVEVFERLPITGGRF 39 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHH--TTCEEEEECSSSSSBTTS
T ss_pred CcEEEECCCHHHHHHHHHHHh--CCCceEEEeCCCCCCCce
Confidence 489999999999999999999 899999999999998875
No 173
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=97.92 E-value=8.2e-06 Score=78.29 Aligned_cols=41 Identities=24% Similarity=0.315 Sum_probs=38.3
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCC-CCcEEEEcCCCCCCCce
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLP-QSTVDIYEKLPVPFGLV 54 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~-g~~v~lie~~~~~gg~~ 54 (388)
..++|+|||||++|+++|..|++ . |.+|+|+|+.+.+||.+
T Consensus 6 ~~~~v~IiGaG~~Gl~aA~~L~~--~~g~~v~v~E~~~~~GG~~ 47 (399)
T 1v0j_A 6 ARFDLFVVGSGFFGLTIAERVAT--QLDKRVLVLERRPHIGGNA 47 (399)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHH--HSCCCEEEECSSSSSSGGG
T ss_pred ccCCEEEECCCHHHHHHHHHHHH--hCCCCEEEEeCCCCCCCee
Confidence 35899999999999999999999 6 99999999999999987
No 174
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=97.90 E-value=3.2e-05 Score=75.83 Aligned_cols=92 Identities=13% Similarity=0.097 Sum_probs=68.0
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCCCCCCcchhHHHHHHHHhhcCCCcEEEceEEEEE
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTKTGDNPRVNFYGNICLGQ 91 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 91 (388)
.+++++|||+|+.|+.+|..|++ .|.+|+++++.+.+. |. ....++...+.+.+++.|++++.++.+..
T Consensus 177 ~~~~vvViGgG~~g~E~A~~l~~--~g~~Vtlv~~~~~~l--------~~-~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~ 245 (474)
T 1zmd_A 177 VPEKMVVIGAGVIGVELGSVWQR--LGADVTAVEFLGHVG--------GV-GIDMEISKNFQRILQKQGFKFKLNTKVTG 245 (474)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSSS--------CS-SCCHHHHHHHHHHHHHTTCEEECSEEEEE
T ss_pred cCceEEEECCCHHHHHHHHHHHH--cCCEEEEEeccCccC--------Cc-ccCHHHHHHHHHHHHHCCCEEEeCceEEE
Confidence 35899999999999999999999 899999999986642 20 12345666677778888999998876632
Q ss_pred E-------eee-------ccc-ccccCEEEEeeCCCCC
Q psy4525 92 D-------ISL-------GDL-TNAYHAVVLTYGADND 114 (388)
Q Consensus 92 ~-------~~~-------~~~-~~~yd~lvlAtG~~~~ 114 (388)
. +.+ .+. ...+|.||+|+|..|.
T Consensus 246 i~~~~~~~~~v~~~~~~~~~~~~i~~D~vv~a~G~~p~ 283 (474)
T 1zmd_A 246 ATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPF 283 (474)
T ss_dssp EEECTTSCEEEEEEETTSCCCEEEEESEEEECSCEEEC
T ss_pred EEEcCCceEEEEEEecCCCCceEEEcCEEEECcCCCcC
Confidence 1 111 111 2378999999997763
No 175
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=97.90 E-value=2.2e-05 Score=76.52 Aligned_cols=92 Identities=15% Similarity=0.089 Sum_probs=67.9
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCCCCCCcchhHHHHHHHHhhcCCCcEEEceEEEEE
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTKTGDNPRVNFYGNICLGQ 91 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 91 (388)
.+++++|||+|+.|+.+|..+++ .|.+|+++++.+.+. |. ....++...+.+.+++.|++++.++.+..
T Consensus 148 ~~~~vvViGgG~~g~E~A~~l~~--~g~~Vtlv~~~~~~l--------~~-~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~ 216 (452)
T 2cdu_A 148 KAKTITIIGSGYIGAELAEAYSN--QNYNVNLIDGHERVL--------YK-YFDKEFTDILAKDYEAHGVNLVLGSKVAA 216 (452)
T ss_dssp GCSEEEEECCSHHHHHHHHHHHT--TTCEEEEEESSSSTT--------TT-TSCHHHHHHHHHHHHHTTCEEEESSCEEE
T ss_pred cCCeEEEECcCHHHHHHHHHHHh--cCCEEEEEEcCCchh--------hh-hhhhhHHHHHHHHHHHCCCEEEcCCeeEE
Confidence 46799999999999999999999 899999999886542 21 12345666777778888999998765532
Q ss_pred E---------eeecccccccCEEEEeeCCCCC
Q psy4525 92 D---------ISLGDLTNAYHAVVLTYGADND 114 (388)
Q Consensus 92 ~---------~~~~~~~~~yd~lvlAtG~~~~ 114 (388)
. +..+.....+|.||+|+|..|.
T Consensus 217 i~~~~~~v~~v~~~g~~i~~D~vv~a~G~~p~ 248 (452)
T 2cdu_A 217 FEEVDDEIITKTLDGKEIKSDIAILCIGFRPN 248 (452)
T ss_dssp EEEETTEEEEEETTSCEEEESEEEECCCEEEC
T ss_pred EEcCCCeEEEEEeCCCEEECCEEEECcCCCCC
Confidence 1 1122222378999999997763
No 176
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.89 E-value=2.4e-05 Score=76.52 Aligned_cols=91 Identities=20% Similarity=0.215 Sum_probs=68.1
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCCCCCCcchhHHHHHHHHhhcCCCcEEEceEEEEE
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTKTGDNPRVNFYGNICLGQ 91 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 91 (388)
.+++++|||+|+.|+.+|..|.+ .|.+|+++++.+.+. |. ...++...+.+.+++.|++++.++.+..
T Consensus 170 ~~~~vvViGgG~~g~E~A~~l~~--~g~~Vtlv~~~~~~l--------~~--~~~~~~~~l~~~l~~~gv~i~~~~~v~~ 237 (464)
T 2a8x_A 170 LPKSIIIAGAGAIGMEFGYVLKN--YGVDVTIVEFLPRAL--------PN--EDADVSKEIEKQFKKLGVTILTATKVES 237 (464)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSSS--------TT--SCHHHHHHHHHHHHHHTCEEECSCEEEE
T ss_pred cCCeEEEECCcHHHHHHHHHHHH--cCCeEEEEEcCCccc--------cc--cCHHHHHHHHHHHHHcCCEEEeCcEEEE
Confidence 45899999999999999999999 899999999986642 32 2345666677777778999998866532
Q ss_pred E--------eeec-cc---ccccCEEEEeeCCCCC
Q psy4525 92 D--------ISLG-DL---TNAYHAVVLTYGADND 114 (388)
Q Consensus 92 ~--------~~~~-~~---~~~yd~lvlAtG~~~~ 114 (388)
. +... +. ...+|.||+|+|..|.
T Consensus 238 i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~ 272 (464)
T 2a8x_A 238 IADGGSQVTVTVTKDGVAQELKAEKVLQAIGFAPN 272 (464)
T ss_dssp EEECSSCEEEEEESSSCEEEEEESEEEECSCEEEC
T ss_pred EEEcCCeEEEEEEcCCceEEEEcCEEEECCCCCcc
Confidence 1 2221 22 2379999999997763
No 177
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=97.88 E-value=9.6e-06 Score=79.44 Aligned_cols=39 Identities=18% Similarity=0.292 Sum_probs=36.9
Q ss_pred CcEEEECccHHHHHHHHHHHhhCCCC--cEEEEcCCCCCCCce
Q psy4525 14 PNVCIVGSGPAGFYCAQQILKLLPQS--TVDIYEKLPVPFGLV 54 (388)
Q Consensus 14 ~~vvIIGaG~aGl~aA~~l~~~~~g~--~v~lie~~~~~gg~~ 54 (388)
++|+|||||++||++|.+|++ .|. +|+|+|+.+.+||.+
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~--~G~~~~V~vlEa~~~~GG~~ 43 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSR--APCPPKVVLVESSERLGGWI 43 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHT--SSSCCEEEEECSSSSSBTTC
T ss_pred ceEEEECCcHHHHHHHHHHHh--CCCCCcEEEEeCCCCCCCce
Confidence 699999999999999999999 888 999999999999877
No 178
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=97.88 E-value=1.1e-05 Score=76.97 Aligned_cols=42 Identities=26% Similarity=0.208 Sum_probs=38.7
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCcee
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVR 55 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~ 55 (388)
..++|+|||||++|+++|..|++ .|.+|+|+|+.+.+||.+.
T Consensus 28 ~~~dv~IIGaG~aGl~aA~~l~~--~g~~v~v~E~~~~~GG~~~ 69 (397)
T 3hdq_A 28 KGFDYLIVGAGFAGSVLAERLAS--SGQRVLIVDRRPHIGGNAY 69 (397)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSSSGGGC
T ss_pred CCCCEEEECccHHHHHHHHHHHH--CCCceEEEeccCCCCCccc
Confidence 35799999999999999999999 8999999999999999873
No 179
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=97.87 E-value=4.5e-05 Score=75.34 Aligned_cols=91 Identities=16% Similarity=0.173 Sum_probs=68.9
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCCCCCCcchhHHHHHHHHhhcCCCcEEEceEEEEE
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTKTGDNPRVNFYGNICLGQ 91 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 91 (388)
.+++++|||+|+.|+.+|..+.+ .+.+|+++++.+.+. |. ...++...+.+.+++.|++++.++.+..
T Consensus 181 ~~~~vvViGgG~ig~E~A~~l~~--~g~~Vtlv~~~~~~l--------~~--~d~~~~~~l~~~l~~~GV~i~~~~~V~~ 248 (499)
T 1xdi_A 181 LPDHLIVVGSGVTGAEFVDAYTE--LGVPVTVVASQDHVL--------PY--EDADAALVLEESFAERGVRLFKNARAAS 248 (499)
T ss_dssp CCSSEEEESCSHHHHHHHHHHHH--TTCCEEEECSSSSSS--------CC--SSHHHHHHHHHHHHHTTCEEETTCCEEE
T ss_pred cCCeEEEECCCHHHHHHHHHHHH--cCCeEEEEEcCCccc--------cc--cCHHHHHHHHHHHHHCCCEEEeCCEEEE
Confidence 45899999999999999999999 899999999986642 22 2345667777778888999998866532
Q ss_pred E--------eeeccc-ccccCEEEEeeCCCCC
Q psy4525 92 D--------ISLGDL-TNAYHAVVLTYGADND 114 (388)
Q Consensus 92 ~--------~~~~~~-~~~yd~lvlAtG~~~~ 114 (388)
. +...+. ...+|.||+|+|..|.
T Consensus 249 i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~p~ 280 (499)
T 1xdi_A 249 VTRTGAGVLVTMTDGRTVEGSHALMTIGSVPN 280 (499)
T ss_dssp EEECSSSEEEEETTSCEEEESEEEECCCEEEC
T ss_pred EEEeCCEEEEEECCCcEEEcCEEEECCCCCcC
Confidence 1 222222 2379999999998764
No 180
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.87 E-value=2.4e-05 Score=77.27 Aligned_cols=93 Identities=14% Similarity=0.072 Sum_probs=68.2
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCC-CCcEEEEcCCCCCCCceeeCCCCCCcchhHHHHHHHHhhcCCCcEEEceEEEE
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLP-QSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTKTGDNPRVNFYGNICLG 90 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~-g~~v~lie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~ 90 (388)
.+++++|||+|+.|+.+|..|.+..+ |.+|+++++.+.+. |. ...++...+.+.+++.|++++.++.+.
T Consensus 190 ~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l--------~~--~d~~~~~~l~~~l~~~GV~i~~~~~v~ 259 (495)
T 2wpf_A 190 PPRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLIL--------RG--FDETIREEVTKQLTANGIEIMTNENPA 259 (495)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSC--------TT--SCHHHHHHHHHHHHHTTCEEEESCCEE
T ss_pred cCCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCccc--------cc--cCHHHHHHHHHHHHhCCCEEEeCCEEE
Confidence 45799999999999999999999321 99999999986542 22 234566677777888899999886653
Q ss_pred E---------Eeeeccc-ccccCEEEEeeCCCCC
Q psy4525 91 Q---------DISLGDL-TNAYHAVVLTYGADND 114 (388)
Q Consensus 91 ~---------~~~~~~~-~~~yd~lvlAtG~~~~ 114 (388)
. .+...++ ...+|.||+|+|..|.
T Consensus 260 ~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~ 293 (495)
T 2wpf_A 260 KVSLNTDGSKHVTFESGKTLDVDVVMMAIGRIPR 293 (495)
T ss_dssp EEEECTTSCEEEEETTSCEEEESEEEECSCEEEC
T ss_pred EEEEcCCceEEEEECCCcEEEcCEEEECCCCccc
Confidence 2 1223333 2379999999997763
No 181
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=97.87 E-value=3.1e-05 Score=75.02 Aligned_cols=91 Identities=13% Similarity=0.122 Sum_probs=66.5
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCCCCCCcchhHHHHHHHHhhcCCCcEEEceEEEEE
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTKTGDNPRVNFYGNICLGQ 91 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 91 (388)
..++|+|||+|+.|+.+|..|++ .|.+|+++++.+.+. |. ....++...+.+.+++.|++++.++.+..
T Consensus 148 ~~~~vvViGgG~~g~E~A~~l~~--~G~~Vtlv~~~~~~l--------~~-~~~~~~~~~l~~~l~~~GV~i~~~~~v~~ 216 (431)
T 1q1r_A 148 ADNRLVVIGGGYIGLEVAATAIK--ANMHVTLLDTAARVL--------ER-VTAPPVSAFYEHLHREAGVDIRTGTQVCG 216 (431)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSTT--------TT-TSCHHHHHHHHHHHHHHTCEEECSCCEEE
T ss_pred cCCeEEEECCCHHHHHHHHHHHh--CCCEEEEEEeCCccc--------cc-hhhHHHHHHHHHHHHhCCeEEEeCCEEEE
Confidence 46899999999999999999999 899999999886542 11 12344556666777778999987755421
Q ss_pred -----------Eeeecccc-cccCEEEEeeCCCC
Q psy4525 92 -----------DISLGDLT-NAYHAVVLTYGADN 113 (388)
Q Consensus 92 -----------~~~~~~~~-~~yd~lvlAtG~~~ 113 (388)
.+...++. ..+|.||+|+|..+
T Consensus 217 i~~~~~~~~v~~v~~~~G~~i~~D~Vv~a~G~~p 250 (431)
T 1q1r_A 217 FEMSTDQQKVTAVLCEDGTRLPADLVIAGIGLIP 250 (431)
T ss_dssp EEECTTTCCEEEEEETTSCEEECSEEEECCCEEE
T ss_pred EEeccCCCcEEEEEeCCCCEEEcCEEEECCCCCc
Confidence 12222332 37999999999766
No 182
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.87 E-value=2.2e-05 Score=77.18 Aligned_cols=91 Identities=16% Similarity=0.124 Sum_probs=68.2
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCCCCCCcchhHHHHHHHHhhcCCCcEEEceEEEEE
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTKTGDNPRVNFYGNICLGQ 91 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 91 (388)
.+++++|||+|+.|+.+|..|.+ .|.+|+++++.+.+. |. ...++...+.+.+++.|++++.++.+..
T Consensus 184 ~~~~vvViGgG~ig~E~A~~l~~--~g~~Vtlv~~~~~~l--------~~--~d~~~~~~l~~~l~~~Gv~i~~~~~v~~ 251 (479)
T 2hqm_A 184 QPKKVVVVGAGYIGIELAGVFHG--LGSETHLVIRGETVL--------RK--FDECIQNTITDHYVKEGINVHKLSKIVK 251 (479)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHH--TTCEEEEECSSSSSC--------TT--SCHHHHHHHHHHHHHHTCEEECSCCEEE
T ss_pred cCCeEEEECCCHHHHHHHHHHHH--cCCceEEEEeCCccc--------cc--cCHHHHHHHHHHHHhCCeEEEeCCEEEE
Confidence 46899999999999999999999 899999999986642 22 2345666677777778999998765421
Q ss_pred ----------Eeeeccc--ccccCEEEEeeCCCCC
Q psy4525 92 ----------DISLGDL--TNAYHAVVLTYGADND 114 (388)
Q Consensus 92 ----------~~~~~~~--~~~yd~lvlAtG~~~~ 114 (388)
.+...++ ...+|.||+|+|..|.
T Consensus 252 i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~ 286 (479)
T 2hqm_A 252 VEKNVETDKLKIHMNDSKSIDDVDELIWTIGRKSH 286 (479)
T ss_dssp EEECC-CCCEEEEETTSCEEEEESEEEECSCEEEC
T ss_pred EEEcCCCcEEEEEECCCcEEEEcCEEEECCCCCCc
Confidence 1333333 3479999999997764
No 183
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=97.87 E-value=3.2e-05 Score=78.00 Aligned_cols=91 Identities=12% Similarity=0.107 Sum_probs=69.1
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCCCCCCcchhHHHHHHHHhhcCCCcEEEceEEEEE
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTKTGDNPRVNFYGNICLGQ 91 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 91 (388)
.+++++|||+|+.|+.+|..+.+ .|.+|+++++.+.+. |. ...++...+.+.+++.|++++.++.+..
T Consensus 186 ~~~~vvViGgG~~g~e~A~~l~~--~g~~Vtlv~~~~~~l--------~~--~~~~~~~~l~~~l~~~GV~i~~~~~v~~ 253 (588)
T 3ics_A 186 KPRHATVIGGGFIGVEMVENLRE--RGIEVTLVEMANQVM--------PP--IDYEMAAYVHEHMKNHDVELVFEDGVDA 253 (588)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSSC--------TT--SCHHHHHHHHHHHHHTTCEEECSCCEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHh--CCCeEEEEecCCccc--------cc--CCHHHHHHHHHHHHHcCCEEEECCeEEE
Confidence 35799999999999999999999 899999999886542 22 2345666777778888999998766532
Q ss_pred ------Eeeecccc-cccCEEEEeeCCCCC
Q psy4525 92 ------DISLGDLT-NAYHAVVLTYGADND 114 (388)
Q Consensus 92 ------~~~~~~~~-~~yd~lvlAtG~~~~ 114 (388)
.+...+.+ ..+|.||+|+|..+.
T Consensus 254 i~~~~~~v~~~~g~~i~~D~Vi~a~G~~p~ 283 (588)
T 3ics_A 254 LEENGAVVRLKSGSVIQTDMLILAIGVQPE 283 (588)
T ss_dssp EEGGGTEEEETTSCEEECSEEEECSCEEEC
T ss_pred EecCCCEEEECCCCEEEcCEEEEccCCCCC
Confidence 13333332 379999999997663
No 184
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=97.86 E-value=4.2e-05 Score=70.46 Aligned_cols=89 Identities=16% Similarity=0.146 Sum_probs=65.6
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCCCCCCcchhHHHHHHHHhhcCCCcEEEceEEEEE
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTKTGDNPRVNFYGNICLGQ 91 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 91 (388)
..++|+|||+|+.|+.+|..|.+ .+.+|+++++.+.+. ....+.+.+.+.+++.+++++.++.+..
T Consensus 144 ~~~~v~ViG~G~~g~e~A~~l~~--~g~~Vtlv~~~~~~~------------~~~~~~~~l~~~l~~~gv~i~~~~~v~~ 209 (320)
T 1trb_A 144 RNQKVAVIGGGNTAVEEALYLSN--IASEVHLIHRRDGFR------------AEKILIKRLMDKVENGNIILHTNRTLEE 209 (320)
T ss_dssp TTSEEEEECSSHHHHHHHHHHTT--TSSEEEEECSSSSCC------------CCHHHHHHHHHHHHTSSEEEECSCEEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHh--cCCeEEEEEeCCccc------------cCHHHHHHHHHhcccCCeEEEcCceeEE
Confidence 45799999999999999999999 899999999875431 1234555666677788999998766532
Q ss_pred E---------eeecc----c---ccccCEEEEeeCCCCC
Q psy4525 92 D---------ISLGD----L---TNAYHAVVLTYGADND 114 (388)
Q Consensus 92 ~---------~~~~~----~---~~~yd~lvlAtG~~~~ 114 (388)
. +...+ . ...+|.||+|+|..+.
T Consensus 210 i~~~~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~p~ 248 (320)
T 1trb_A 210 VTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSPN 248 (320)
T ss_dssp EEECSSSEEEEEEECCTTCCCCEEEECSEEEECSCEEES
T ss_pred EEcCCCceEEEEEEeccCCCceEEEEcCEEEEEeCCCCC
Confidence 1 33222 2 2378999999997763
No 185
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=97.85 E-value=8.2e-06 Score=79.41 Aligned_cols=40 Identities=30% Similarity=0.417 Sum_probs=37.5
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCce
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLV 54 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~ 54 (388)
.++|+|||||++|++||..|++ .|.+|+|+|+.+.+||.+
T Consensus 5 ~~~v~iiG~G~~Gl~aA~~l~~--~g~~v~v~E~~~~~GG~~ 44 (453)
T 2yg5_A 5 QRDVAIVGAGPSGLAAATALRK--AGLSVAVIEARDRVGGRT 44 (453)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSSCTTC
T ss_pred cCCEEEECCCHHHHHHHHHHHH--CCCcEEEEECCCCCCCce
Confidence 4699999999999999999999 899999999999999876
No 186
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.84 E-value=2.5e-05 Score=76.94 Aligned_cols=93 Identities=13% Similarity=0.063 Sum_probs=68.3
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCC-CCcEEEEcCCCCCCCceeeCCCCCCcchhHHHHHHHHhhcCCCcEEEceEEEE
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLP-QSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTKTGDNPRVNFYGNICLG 90 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~-g~~v~lie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~ 90 (388)
.+++++|||+|+.|+.+|..|.+..+ |.+|+++++.+.+. |. ...++...+.+.+++.|++++.++.+.
T Consensus 186 ~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l--------~~--~d~~~~~~l~~~l~~~GV~i~~~~~v~ 255 (490)
T 1fec_A 186 APKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMIL--------RG--FDSELRKQLTEQLRANGINVRTHENPA 255 (490)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSS--------TT--SCHHHHHHHHHHHHHTTEEEEETCCEE
T ss_pred cCCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCcc--------cc--cCHHHHHHHHHHHHhCCCEEEeCCEEE
Confidence 45799999999999999999999211 99999999986642 22 234566677777888899999876553
Q ss_pred E---------Eeeeccc-ccccCEEEEeeCCCCC
Q psy4525 91 Q---------DISLGDL-TNAYHAVVLTYGADND 114 (388)
Q Consensus 91 ~---------~~~~~~~-~~~yd~lvlAtG~~~~ 114 (388)
. .+...++ ...+|.||+|+|..|.
T Consensus 256 ~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~ 289 (490)
T 1fec_A 256 KVTKNADGTRHVVFESGAEADYDVVMLAIGRVPR 289 (490)
T ss_dssp EEEECTTSCEEEEETTSCEEEESEEEECSCEEES
T ss_pred EEEEcCCCEEEEEECCCcEEEcCEEEEccCCCcC
Confidence 2 1223333 2479999999997764
No 187
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=97.84 E-value=1.3e-05 Score=78.54 Aligned_cols=41 Identities=24% Similarity=0.280 Sum_probs=37.3
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCce
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLV 54 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~ 54 (388)
..++|+|||||++|++||..|++ .|.+|+|+|+.+.+||.+
T Consensus 15 ~~~~v~iiG~G~~Gl~aa~~l~~--~g~~v~v~E~~~~~GGr~ 55 (478)
T 2ivd_A 15 TGMNVAVVGGGISGLAVAHHLRS--RGTDAVLLESSARLGGAV 55 (478)
T ss_dssp --CCEEEECCBHHHHHHHHHHHT--TTCCEEEECSSSSSBTTC
T ss_pred CCCcEEEECCCHHHHHHHHHHHH--CCCCEEEEEcCCCCCcee
Confidence 45799999999999999999999 899999999999999876
No 188
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.84 E-value=4.6e-05 Score=75.07 Aligned_cols=91 Identities=13% Similarity=0.145 Sum_probs=68.3
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCCCCCCcchhHHHHHHHHhhcCCCcEEEceEEEEE
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTKTGDNPRVNFYGNICLGQ 91 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 91 (388)
.+++|+|||+|+.|+.+|..|.+ .|.+|+++++.+.+. |. ...++...+.+.+++.|++++.++.+..
T Consensus 197 ~~~~vvViGgG~~g~E~A~~l~~--~g~~Vtlv~~~~~~l--------~~--~d~~~~~~l~~~l~~~gV~v~~~~~v~~ 264 (491)
T 3urh_A 197 VPASMIVVGGGVIGLELGSVWAR--LGAKVTVVEFLDTIL--------GG--MDGEVAKQLQRMLTKQGIDFKLGAKVTG 264 (491)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHH--HTCEEEEECSSSSSS--------SS--SCHHHHHHHHHHHHHTTCEEECSEEEEE
T ss_pred cCCeEEEECCCHHHHHHHHHHHH--cCCEEEEEecccccc--------cc--CCHHHHHHHHHHHHhCCCEEEECCeEEE
Confidence 46899999999999999999999 799999999887643 21 2345666677778888999998876532
Q ss_pred E--------eeecc---c---ccccCEEEEeeCCCCC
Q psy4525 92 D--------ISLGD---L---TNAYHAVVLTYGADND 114 (388)
Q Consensus 92 ~--------~~~~~---~---~~~yd~lvlAtG~~~~ 114 (388)
. +...+ + ...+|.||+|+|..|.
T Consensus 265 i~~~~~~~~v~~~~~~~g~~~~i~~D~Vi~a~G~~p~ 301 (491)
T 3urh_A 265 AVKSGDGAKVTFEPVKGGEATTLDAEVVLIATGRKPS 301 (491)
T ss_dssp EEEETTEEEEEEEETTSCCCEEEEESEEEECCCCEEC
T ss_pred EEEeCCEEEEEEEecCCCceEEEEcCEEEEeeCCccC
Confidence 1 22221 2 2379999999997763
No 189
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=97.83 E-value=1.4e-05 Score=78.98 Aligned_cols=41 Identities=20% Similarity=0.286 Sum_probs=37.9
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCce
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLV 54 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~ 54 (388)
..++|+|||||++||++|..|++ .|++|+|+|+.+.+||.+
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~~--~g~~v~v~E~~~~~GG~~ 52 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLKI--HGLNVTVFEAEGKAGGKL 52 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHT--TSCEEEEECSSSSSCSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHH--CCCcEEEEEeCCCCCCce
Confidence 45899999999999999999999 899999999999999876
No 190
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=97.83 E-value=1.5e-05 Score=74.95 Aligned_cols=37 Identities=16% Similarity=0.144 Sum_probs=33.7
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCC
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPF 51 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~g 51 (388)
.+||+|||||++|+++|..|++ .|.+|+|+|+.+.++
T Consensus 4 ~~dvvIIG~G~~Gl~~A~~La~--~G~~V~vlE~~~~~~ 40 (369)
T 3dme_A 4 DIDCIVIGAGVVGLAIARALAA--GGHEVLVAEAAEGIG 40 (369)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHh--CCCeEEEEeCCCCCC
Confidence 4799999999999999999999 899999999986543
No 191
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.83 E-value=5.8e-05 Score=73.43 Aligned_cols=90 Identities=17% Similarity=0.092 Sum_probs=66.5
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCCCCCCcchhHHHHHHHHhhcCCCcEEEceEEEEE
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTKTGDNPRVNFYGNICLGQ 91 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 91 (388)
..++++|||+|+.|+.+|..+++ .|.+|+++++.+.+. +. ....++...+.+.+++. ++++.++.+..
T Consensus 147 ~~~~vvViGgG~~g~E~A~~l~~--~g~~Vtlv~~~~~~l--------~~-~~~~~~~~~l~~~l~~~-v~i~~~~~v~~ 214 (449)
T 3kd9_A 147 KVENVVIIGGGYIGIEMAEAFAA--QGKNVTMIVRGERVL--------RR-SFDKEVTDILEEKLKKH-VNLRLQEITMK 214 (449)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESSSSTT--------TT-TSCHHHHHHHHHHHTTT-SEEEESCCEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHh--CCCeEEEEEcCCccc--------hh-hcCHHHHHHHHHHHHhC-cEEEeCCeEEE
Confidence 45799999999999999999999 899999999986542 21 12345666777778777 99987766532
Q ss_pred E--------eeecccccccCEEEEeeCCCC
Q psy4525 92 D--------ISLGDLTNAYHAVVLTYGADN 113 (388)
Q Consensus 92 ~--------~~~~~~~~~yd~lvlAtG~~~ 113 (388)
. +..+.....+|.||+|+|..|
T Consensus 215 i~~~~~v~~v~~~g~~i~~D~Vv~a~G~~p 244 (449)
T 3kd9_A 215 IEGEERVEKVVTDAGEYKAELVILATGIKP 244 (449)
T ss_dssp EECSSSCCEEEETTEEEECSEEEECSCEEE
T ss_pred EeccCcEEEEEeCCCEEECCEEEEeeCCcc
Confidence 1 112222347999999999766
No 192
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.83 E-value=6.4e-05 Score=74.09 Aligned_cols=91 Identities=14% Similarity=0.145 Sum_probs=67.0
Q ss_pred CCCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCCCCCCcchhHHHHHHHHhhcCCCcEEEceEEEE
Q psy4525 11 QLKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTKTGDNPRVNFYGNICLG 90 (388)
Q Consensus 11 ~~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~ 90 (388)
..+++|+|||+|+.|+.+|..|.+ .|.+|+++++.+.+. |. ...++...+.+.+++. ++++.++.+.
T Consensus 172 ~~~k~vvViGgG~ig~E~A~~l~~--~g~~Vtlv~~~~~~l--------~~--~d~~~~~~l~~~l~~~-V~i~~~~~v~ 238 (492)
T 3ic9_A 172 DLPKSVAVFGPGVIGLELGQALSR--LGVIVKVFGRSGSVA--------NL--QDEEMKRYAEKTFNEE-FYFDAKARVI 238 (492)
T ss_dssp SCCSEEEEESSCHHHHHHHHHHHH--TTCEEEEECCTTCCT--------TC--CCHHHHHHHHHHHHTT-SEEETTCEEE
T ss_pred hcCCeEEEECCCHHHHHHHHHHHH--cCCeEEEEEECCccc--------cc--CCHHHHHHHHHHHhhC-cEEEECCEEE
Confidence 346899999999999999999999 899999999987643 21 2345666666777766 9998876653
Q ss_pred EE--------eeec--cc---ccccCEEEEeeCCCCC
Q psy4525 91 QD--------ISLG--DL---TNAYHAVVLTYGADND 114 (388)
Q Consensus 91 ~~--------~~~~--~~---~~~yd~lvlAtG~~~~ 114 (388)
.. +... ++ ...+|.||+|+|..|.
T Consensus 239 ~i~~~~~~v~v~~~~~~G~~~~i~~D~Vi~a~G~~p~ 275 (492)
T 3ic9_A 239 STIEKEDAVEVIYFDKSGQKTTESFQYVLAATGRKAN 275 (492)
T ss_dssp EEEECSSSEEEEEECTTCCEEEEEESEEEECSCCEES
T ss_pred EEEEcCCEEEEEEEeCCCceEEEECCEEEEeeCCccC
Confidence 21 2221 22 2379999999998763
No 193
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.82 E-value=4.4e-05 Score=74.73 Aligned_cols=91 Identities=15% Similarity=0.207 Sum_probs=67.7
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCCCCCCcchhHHHHHHHHhh-cCCCcEEEceEEEE
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTKTG-DNPRVNFYGNICLG 90 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~-~~~~i~~~~~~~v~ 90 (388)
.+++++|||+|+.|+.+|..+.+ .|.+|+++++.+.+. |. ...++...+.+.+ ++.|++++.++.+.
T Consensus 173 ~~~~vvViGgG~~g~E~A~~l~~--~g~~Vtlv~~~~~~l--------~~--~d~~~~~~l~~~l~~~~gv~i~~~~~v~ 240 (468)
T 2qae_A 173 VPKTMVVIGGGVIGLELGSVWAR--LGAEVTVVEFAPRCA--------PT--LDEDVTNALVGALAKNEKMKFMTSTKVV 240 (468)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSSS--------TT--SCHHHHHHHHHHHHHHTCCEEECSCEEE
T ss_pred CCceEEEECCCHHHHHHHHHHHH--hCCEEEEEecCCccc--------cc--CCHHHHHHHHHHHhhcCCcEEEeCCEEE
Confidence 45899999999999999999999 899999999986642 31 2345666777777 78899999876653
Q ss_pred EE--------eeec--cc---ccccCEEEEeeCCCCC
Q psy4525 91 QD--------ISLG--DL---TNAYHAVVLTYGADND 114 (388)
Q Consensus 91 ~~--------~~~~--~~---~~~yd~lvlAtG~~~~ 114 (388)
.. +... ++ ...+|.||+|+|..|.
T Consensus 241 ~i~~~~~~~~v~~~~~~g~~~~i~~D~vv~a~G~~p~ 277 (468)
T 2qae_A 241 GGTNNGDSVSLEVEGKNGKRETVTCEALLVSVGRRPF 277 (468)
T ss_dssp EEEECSSSEEEEEECC---EEEEEESEEEECSCEEEC
T ss_pred EEEEcCCeEEEEEEcCCCceEEEECCEEEECCCcccC
Confidence 21 2222 22 2379999999997763
No 194
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.82 E-value=5.1e-05 Score=74.49 Aligned_cols=91 Identities=12% Similarity=0.047 Sum_probs=67.8
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCCCCCCcchhHHHHHHHHhhcCCCcEEEceEEEEE
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTKTGDNPRVNFYGNICLGQ 91 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 91 (388)
.+++++|||+|+.|+.+|..|++ .|.+|+++++.+.+. |. ...++...+.+.+++.|++++.++.+..
T Consensus 186 ~~~~vvViGgG~~g~E~A~~l~~--~g~~Vtlv~~~~~~l--------~~--~d~~~~~~~~~~l~~~gv~i~~~~~v~~ 253 (478)
T 3dk9_A 186 LPGRSVIVGAGYIAVEMAGILSA--LGSKTSLMIRHDKVL--------RS--FDSMISTNCTEELENAGVEVLKFSQVKE 253 (478)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSSC--------TT--SCHHHHHHHHHHHHHTTCEEETTEEEEE
T ss_pred cCccEEEECCCHHHHHHHHHHHH--cCCeEEEEEeCCccc--------cc--cCHHHHHHHHHHHHHCCCEEEeCCEEEE
Confidence 35899999999999999999999 899999999886542 21 2345666677778888999998876532
Q ss_pred E----------eeecc--------cccccCEEEEeeCCCCC
Q psy4525 92 D----------ISLGD--------LTNAYHAVVLTYGADND 114 (388)
Q Consensus 92 ~----------~~~~~--------~~~~yd~lvlAtG~~~~ 114 (388)
. +...+ ....+|.||+|+|..|.
T Consensus 254 i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~p~ 294 (478)
T 3dk9_A 254 VKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPN 294 (478)
T ss_dssp EEECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCEEES
T ss_pred EEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeeccccC
Confidence 1 22222 12379999999997663
No 195
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=97.82 E-value=7.2e-06 Score=79.98 Aligned_cols=40 Identities=28% Similarity=0.335 Sum_probs=36.8
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCC------CcEEEEcCCCCCCCce
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQ------STVDIYEKLPVPFGLV 54 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g------~~v~lie~~~~~gg~~ 54 (388)
+++|+|||||++||+||..|++ .| .+|+|+|+.+.+||..
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~--~G~~~~~~~~V~vlEa~~~~GG~~ 50 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEK--EIKEKNLPLELTLVEASPRVGGKI 50 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH--HHTTTTCSEEEEEECSSSSSCTTC
T ss_pred CCcEEEECCCHHHHHHHHHHHH--hccccCCCCCEEEEECCCCCCceE
Confidence 4799999999999999999999 67 9999999999998865
No 196
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=97.80 E-value=4.9e-05 Score=72.95 Aligned_cols=115 Identities=15% Similarity=0.083 Sum_probs=65.1
Q ss_pred CeEEEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecCcccccCCHHHHHHHhcCCCceEEecc
Q psy4525 153 EEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRGALQVAFTIKEFREMTKLPHVQTVFRN 232 (388)
Q Consensus 153 ~~vvVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~~~~~~~~~~el~~l~~~~~~~~~~~~ 232 (388)
++|+|||||.+|+.+|..|.+ ....+ .+|+++.+++.+..... .+.. .
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~-----------------~~~~g-~~V~vie~~~~~~~~~~---------~~~~---~-- 49 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKR-----------------LVGSK-ADVKVINKSRFSYFRPA---------LPHV---A-- 49 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHH-----------------HHGGG-SEEEEEESSSEEEECCS---------SCCC---C--
T ss_pred CeEEEECCCHHHHHHHHHHHh-----------------hCCCC-CeEEEEeCCCCceeccc---------hhhc---c--
Confidence 579999999999999998861 00022 47999999875422100 0000 0
Q ss_pred cccccchhhhccccchhhHHHHHHHhhCCCCCCCCCCceeEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEe
Q psy4525 233 EQLCGVHEASATLARPRKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIP 312 (388)
Q Consensus 233 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~ 312 (388)
............+.+. ..+.+++++.+ .++.+..+. . .+.+.++ .+...++.
T Consensus 50 -------~~~~~~~~~~~~~~~~------------~~~~gv~~~~~-~v~~i~~~~--~--~V~~~~g----~~~~~~~~ 101 (409)
T 3h8l_A 50 -------IGVRDVDELKVDLSEA------------LPEKGIQFQEG-TVEKIDAKS--S--MVYYTKP----DGSMAEEE 101 (409)
T ss_dssp -------SSCCCCCCEEEEHHHH------------TGGGTCEEEEC-EEEEEETTT--T--EEEEECT----TSCEEEEE
T ss_pred -------cCCcCHHHHHHHHHHH------------HhhCCeEEEEe-eEEEEeCCC--C--EEEEccC----Ccccceee
Confidence 0000000111111112 12468888877 788887532 2 2333322 22345799
Q ss_pred cceEEEccccCCccC
Q psy4525 313 SGIAFRSIGYQSRCV 327 (388)
Q Consensus 313 ~D~Vi~a~G~~p~~~ 327 (388)
+|.||+|+|.+|+..
T Consensus 102 ~d~lViAtG~~~~~~ 116 (409)
T 3h8l_A 102 YDYVIVGIGAHLATE 116 (409)
T ss_dssp CSEEEECCCCEECGG
T ss_pred CCEEEECCCCCcCcc
Confidence 999999999988753
No 197
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=97.80 E-value=5.5e-05 Score=75.18 Aligned_cols=89 Identities=7% Similarity=-0.069 Sum_probs=68.3
Q ss_pred CcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCCCCCCcchhHHHHHHHHhhcCCCcEEEceEEEEEE-
Q psy4525 14 PNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTKTGDNPRVNFYGNICLGQD- 92 (388)
Q Consensus 14 ~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~~- 92 (388)
++++|||+|+.|+.+|..+.+ .|.+|+++++.+.+. |. ...++...+.+.+++.|++++.++.+...
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~--~G~~Vtlv~~~~~~l--------~~--~~~~~~~~l~~~l~~~GV~i~~~~~V~~i~ 282 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNA--TGRRTVMLVRTEPLK--------LI--KDNETRAYVLDRMKEQGMEIISGSNVTRIE 282 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSCTTT--------TC--CSHHHHHHHHHHHHHTTCEEESSCEEEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHH--cCCeEEEEEecCccc--------cc--ccHHHHHHHHHHHHhCCcEEEECCEEEEEE
Confidence 899999999999999999999 899999999986542 22 23456677777788889999988665321
Q ss_pred -----------eeeccc--ccccCEEEEeeCCCCC
Q psy4525 93 -----------ISLGDL--TNAYHAVVLTYGADND 114 (388)
Q Consensus 93 -----------~~~~~~--~~~yd~lvlAtG~~~~ 114 (388)
+...++ ...+|.||+|+|..|.
T Consensus 283 ~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~p~ 317 (523)
T 1mo9_A 283 EDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQPR 317 (523)
T ss_dssp ECTTSBEEEEEEEETTEEEEEECSCEEECCCCEEC
T ss_pred EcCCCceEEEEEEECCCcEEEEcCEEEECcCCccC
Confidence 223333 3479999999998764
No 198
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=97.79 E-value=1.5e-05 Score=78.47 Aligned_cols=39 Identities=15% Similarity=0.139 Sum_probs=37.2
Q ss_pred CcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCce
Q psy4525 14 PNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLV 54 (388)
Q Consensus 14 ~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~ 54 (388)
++|+|||||++|++||..|++ .|++|+|+|+.+.+||.+
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~--~g~~v~v~E~~~~~GGr~ 78 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTV--AGFKTLLLEARDRIGGRS 78 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHH--TTCCEEEECSSSBSBTTC
T ss_pred CCEEEECCcHHHHHHHHHHHH--CCCCEEEEeCCCCCCCcc
Confidence 799999999999999999999 899999999999999876
No 199
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=97.78 E-value=4.7e-05 Score=76.34 Aligned_cols=91 Identities=11% Similarity=0.134 Sum_probs=67.0
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCCCCCCcchhHHHHHHHHhhcCCCcEEEceEEEEE
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTKTGDNPRVNFYGNICLGQ 91 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 91 (388)
.+++|+|||+|+.|+.+|..|++ .|.+|+++++.+.+. | ....++...+.+.+++.|++++.++.+..
T Consensus 150 ~~~~vvViGgG~~g~e~A~~l~~--~g~~Vtlv~~~~~~l--------~--~~~~~~~~~l~~~l~~~GV~i~~~~~v~~ 217 (565)
T 3ntd_A 150 NVEHATVVGGGFIGLEMMESLHH--LGIKTTLLELADQVM--------T--PVDREMAGFAHQAIRDQGVDLRLGTALSE 217 (565)
T ss_dssp TCSEEEEECCSHHHHHHHHHHHH--TTCEEEEEESSSSSC--------T--TSCHHHHHHHHHHHHHTTCEEEETCCEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHh--cCCcEEEEEcCCccc--------h--hcCHHHHHHHHHHHHHCCCEEEeCCeEEE
Confidence 35799999999999999999999 899999999986542 3 22345666677777888999987765422
Q ss_pred E---------------------------eeeccc-ccccCEEEEeeCCCCC
Q psy4525 92 D---------------------------ISLGDL-TNAYHAVVLTYGADND 114 (388)
Q Consensus 92 ~---------------------------~~~~~~-~~~yd~lvlAtG~~~~ 114 (388)
. +...+. ...+|.||+|+|..+.
T Consensus 218 i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~ 268 (565)
T 3ntd_A 218 VSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNGELLETDLLIMAIGVRPE 268 (565)
T ss_dssp EEEECCCCCCCGGGTCCCTTCCTTCEEEEEETTSCEEEESEEEECSCEEEC
T ss_pred EeccccccccccccccccccccCCCcEEEEEcCCCEEEcCEEEECcCCccc
Confidence 1 122222 2379999999997663
No 200
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=97.78 E-value=1.9e-05 Score=75.38 Aligned_cols=35 Identities=31% Similarity=0.418 Sum_probs=32.2
Q ss_pred CcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCC
Q psy4525 14 PNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVP 50 (388)
Q Consensus 14 ~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~ 50 (388)
.+|+||||||+|+++|..|++ .|++|+|||+.+.+
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~--~G~~v~v~Er~~~~ 36 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRK--HGIKVTIYERNSAA 36 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSCSS
T ss_pred CEEEEECcCHHHHHHHHHHHh--CCCCEEEEecCCCC
Confidence 489999999999999999999 89999999987654
No 201
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.78 E-value=5.9e-05 Score=73.92 Aligned_cols=91 Identities=12% Similarity=0.182 Sum_probs=68.4
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCCCCCCcchhHHHHHHHHhhcCCCcEEEceEEEEE
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTKTGDNPRVNFYGNICLGQ 91 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 91 (388)
.+++++|||+|+.|+.+|..+.+ .|.+|+++++.+.+. |. ...++...+.+.+++.|++++.++.+..
T Consensus 179 ~~~~v~ViGgG~~g~e~A~~l~~--~g~~Vtlv~~~~~~l--------~~--~~~~~~~~l~~~l~~~Gv~v~~~~~v~~ 246 (476)
T 3lad_A 179 VPGKLGVIGAGVIGLELGSVWAR--LGAEVTVLEAMDKFL--------PA--VDEQVAKEAQKILTKQGLKILLGARVTG 246 (476)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHH--TTCEEEEEESSSSSS--------TT--SCHHHHHHHHHHHHHTTEEEEETCEEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHH--cCCcEEEEecCCCcC--------cc--cCHHHHHHHHHHHHhCCCEEEECCEEEE
Confidence 46899999999999999999999 899999999986542 21 2345666777778888999998866532
Q ss_pred E--------eeecc----cccccCEEEEeeCCCCC
Q psy4525 92 D--------ISLGD----LTNAYHAVVLTYGADND 114 (388)
Q Consensus 92 ~--------~~~~~----~~~~yd~lvlAtG~~~~ 114 (388)
. +...+ ....+|.||+|+|..|.
T Consensus 247 i~~~~~~~~v~~~~~~g~~~~~~D~vi~a~G~~p~ 281 (476)
T 3lad_A 247 TEVKNKQVTVKFVDAEGEKSQAFDKLIVAVGRRPV 281 (476)
T ss_dssp EEECSSCEEEEEESSSEEEEEEESEEEECSCEEEC
T ss_pred EEEcCCEEEEEEEeCCCcEEEECCEEEEeeCCccc
Confidence 1 22221 12378999999997663
No 202
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.78 E-value=2.6e-05 Score=76.37 Aligned_cols=91 Identities=12% Similarity=0.119 Sum_probs=68.3
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCCCCCCcchhHHHHHHHHhhcCCCcEEEceEEEEE
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTKTGDNPRVNFYGNICLGQ 91 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 91 (388)
.+++++|||+|+.|+.+|..|++ .|.+|+++++.+.+. |. ...++.+.+.+.+++.|++++.++.+..
T Consensus 176 ~~~~vvViGgG~~g~e~A~~l~~--~g~~Vtli~~~~~~l--------~~--~~~~~~~~l~~~l~~~gv~i~~~~~v~~ 243 (470)
T 1dxl_A 176 IPKKLVVIGAGYIGLEMGSVWGR--IGSEVTVVEFASEIV--------PT--MDAEIRKQFQRSLEKQGMKFKLKTKVVG 243 (470)
T ss_dssp CCSEEEESCCSHHHHHHHHHHHH--HTCEEEEECSSSSSS--------TT--SCHHHHHHHHHHHHHSSCCEECSEEEEE
T ss_pred cCCeEEEECCCHHHHHHHHHHHH--cCCcEEEEEcCCccc--------cc--ccHHHHHHHHHHHHHcCCEEEeCCEEEE
Confidence 45899999999999999999999 799999999986642 31 2345666677778888999998876632
Q ss_pred E--------eeec---cc---ccccCEEEEeeCCCCC
Q psy4525 92 D--------ISLG---DL---TNAYHAVVLTYGADND 114 (388)
Q Consensus 92 ~--------~~~~---~~---~~~yd~lvlAtG~~~~ 114 (388)
. +... +. ...+|.||+|+|..|.
T Consensus 244 i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~ 280 (470)
T 1dxl_A 244 VDTSGDGVKLTVEPSAGGEQTIIEADVVLVSAGRTPF 280 (470)
T ss_dssp EECSSSSEEEEEEESSSCCCEEEEESEEECCCCEEEC
T ss_pred EEEcCCeEEEEEEecCCCcceEEECCEEEECCCCCcC
Confidence 1 2221 22 2379999999997763
No 203
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=97.77 E-value=4.9e-05 Score=74.49 Aligned_cols=92 Identities=16% Similarity=0.096 Sum_probs=68.2
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCC-CCcEEEEcCCCCCCCceeeCCCCCCcchhHHHHHHHHhhcCCCcEEEceEEEE
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLP-QSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTKTGDNPRVNFYGNICLG 90 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~-g~~v~lie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~ 90 (388)
.+++++|||+|+.|+.+|..+.+ . +.+|+++++.+.+. |. ....++...+.+.+++.|++++.++.+.
T Consensus 158 ~~~~vvViGgG~~g~e~A~~l~~--~~g~~Vtlv~~~~~~l--------~~-~~~~~~~~~l~~~l~~~GV~i~~~~~v~ 226 (472)
T 3iwa_A 158 EVSKAVIVGGGFIGLEMAVSLAD--MWGIDTTVVELADQIM--------PG-FTSKSLSQMLRHDLEKNDVVVHTGEKVV 226 (472)
T ss_dssp SCSEEEEECCSHHHHHHHHHHHH--HHCCEEEEECSSSSSS--------TT-TSCHHHHHHHHHHHHHTTCEEECSCCEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHH--hcCCcEEEEEccCccc--------cc-ccCHHHHHHHHHHHHhcCCEEEeCCEEE
Confidence 36899999999999999999999 7 99999999886542 21 1234566677777888899999876553
Q ss_pred EE--------eeeccc-ccccCEEEEeeCCCCC
Q psy4525 91 QD--------ISLGDL-TNAYHAVVLTYGADND 114 (388)
Q Consensus 91 ~~--------~~~~~~-~~~yd~lvlAtG~~~~ 114 (388)
.. +...+. ...+|.||+|+|..+.
T Consensus 227 ~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~p~ 259 (472)
T 3iwa_A 227 RLEGENGKVARVITDKRTLDADLVILAAGVSPN 259 (472)
T ss_dssp EEEESSSBEEEEEESSCEEECSEEEECSCEEEC
T ss_pred EEEccCCeEEEEEeCCCEEEcCEEEECCCCCcC
Confidence 21 222233 3479999999997763
No 204
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.76 E-value=2.2e-05 Score=74.90 Aligned_cols=40 Identities=23% Similarity=0.251 Sum_probs=37.5
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCce
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLV 54 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~ 54 (388)
.++|+|||||++|+++|..|.+ .|.+|+|+|+.+.+||.+
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~--~g~~v~v~E~~~~~GG~~ 42 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAE--KGHQVHIIDQRDHIGGNS 42 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT--TTCEEEEEESSSSSSGGG
T ss_pred cCCEEEECcCHHHHHHHHHHHH--CCCcEEEEEecCCcCCcc
Confidence 3699999999999999999999 899999999999999887
No 205
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.76 E-value=2.6e-05 Score=76.79 Aligned_cols=43 Identities=33% Similarity=0.566 Sum_probs=38.8
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCC-CcEEEEcCCCCCCCceee
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQ-STVDIYEKLPVPFGLVRY 56 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g-~~v~lie~~~~~gg~~~~ 56 (388)
..++|+|||||++|+++|..|.+ .| .+|+|+|+.+.+||.+..
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~--~g~~~v~v~E~~~~~GG~~~~ 51 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTE--LGYKNWHLYECNDTPGGLSRS 51 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHH--TTCCSEEEEESSSSSSGGGCE
T ss_pred cCCCEEEECcCHHHHHHHHHHHH--cCCCCEEEEeCCCCCCCeeee
Confidence 45799999999999999999999 77 799999999999998743
No 206
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=97.75 E-value=0.00011 Score=66.79 Aligned_cols=56 Identities=9% Similarity=0.091 Sum_probs=38.7
Q ss_pred ceeEEEEecCcceeeeeCCCCceeEEEEccCcc-c-----cCCceeEEecceEEEccccCCcc
Q psy4525 270 SKYFRPIFLRSPTEFKLNDNGAITGINFANQQA-L-----VTEDTELIPSGIAFRSIGYQSRC 326 (388)
Q Consensus 270 ~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~-~-----~~~~~~~l~~D~Vi~a~G~~p~~ 326 (388)
..|+++++++.++++..+ ++++.++.+..... . ..++..++++|.||.|+|..++.
T Consensus 132 ~~gv~i~~~~~V~~i~~~-~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s~~ 193 (284)
T 1rp0_A 132 RPNVKLFNAVAAEDLIVK-GNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGPF 193 (284)
T ss_dssp STTEEEEETEEEEEEEEE-TTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSSSTT
T ss_pred cCCCEEEcCcEEEEEEec-CCeEEEEEEeccccccccCccccCceEEEECCEEEECCCCchHH
Confidence 368999999999999764 35676766531000 0 01233689999999999988764
No 207
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=97.75 E-value=6e-05 Score=72.95 Aligned_cols=108 Identities=12% Similarity=0.049 Sum_probs=63.3
Q ss_pred CeEEEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecCcccccCCHHHHHHHhcCCCceEEecc
Q psy4525 153 EEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRGALQVAFTIKEFREMTKLPHVQTVFRN 232 (388)
Q Consensus 153 ~~vvVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~~~~~~~~~~el~~l~~~~~~~~~~~~ 232 (388)
|+|+|||||..|+.+|..|.+ .....+||+|.+++.+... +.+.++..-. +.+
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~-------------------~~~~~~VtlI~~~~~~~~~---p~l~~v~~g~-----~~~ 55 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRN-------------------LMPDLKITLISDRPYFGFT---PAFPHLAMGW-----RKF 55 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHH-------------------HCTTCEEEEECSSSEEECG---GGHHHHHHTC-----SCG
T ss_pred CcEEEECCCHHHHHHHHHHhc-------------------cCcCCeEEEEcCCCCCccC---ccHHHHhcCC-----CCH
Confidence 789999999999999997751 0112479999998765332 2222222100 000
Q ss_pred cccccchhhhccccchhhHHHHHHHhhCCCCCCCCCCceeEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEe
Q psy4525 233 EQLCGVHEASATLARPRKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIP 312 (388)
Q Consensus 233 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~ 312 (388)
++ +....+ +...+.||+++.. .++.|..+. + .+ .+.++++++
T Consensus 56 ~~----------i~~~~~---------------~~~~~~gv~~i~~-~v~~Id~~~--~--~V--------~~~~g~~i~ 97 (430)
T 3hyw_A 56 ED----------ISVPLA---------------PLLPKFNIEFINE-KAESIDPDA--N--TV--------TTQSGKKIE 97 (430)
T ss_dssp GG----------SEEEST---------------TTGGGGTEEEECS-CEEEEETTT--T--EE--------EETTCCEEE
T ss_pred HH----------hhhcHH---------------HHHHHCCcEEEEe-EEEEEECCC--C--EE--------EECCCCEEE
Confidence 00 000000 0122468888655 577776432 2 12 345667899
Q ss_pred cceEEEccccCCc
Q psy4525 313 SGIAFRSIGYQSR 325 (388)
Q Consensus 313 ~D~Vi~a~G~~p~ 325 (388)
+|.+|+|||.++.
T Consensus 98 YD~LViAtG~~~~ 110 (430)
T 3hyw_A 98 YDYLVIATGPKLV 110 (430)
T ss_dssp CSEEEECCCCEEE
T ss_pred CCEEEEeCCCCcc
Confidence 9999999998753
No 208
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=97.74 E-value=8.3e-05 Score=69.02 Aligned_cols=89 Identities=16% Similarity=0.145 Sum_probs=65.9
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCCCCCCcchhHHHHHHHHhhcCCCcEEEceEEEEE
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTKTGDNPRVNFYGNICLGQ 91 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 91 (388)
..++|+|||+|+.|+.+|..|.+ .+.+|+++++.+.+. + ..+....+.+.+++.+++++.++.+..
T Consensus 151 ~~~~v~viG~G~~g~e~a~~l~~--~g~~V~~v~~~~~~~--------~----~~~~~~~l~~~l~~~gv~v~~~~~v~~ 216 (335)
T 2zbw_A 151 QGKRVLIVGGGDSAVDWALNLLD--TARRITLIHRRPQFR--------A----HEASVKELMKAHEEGRLEVLTPYELRR 216 (335)
T ss_dssp TTCEEEEECSSHHHHHHHHHTTT--TSSEEEEECSSSSCC--------S----CHHHHHHHHHHHHTTSSEEETTEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHh--hCCEEEEEEcCCccC--------c----cHHHHHHHHhccccCCeEEecCCccee
Confidence 35799999999999999999998 799999999886532 1 123455666777788999998866532
Q ss_pred --------Eeeec---cc---ccccCEEEEeeCCCCC
Q psy4525 92 --------DISLG---DL---TNAYHAVVLTYGADND 114 (388)
Q Consensus 92 --------~~~~~---~~---~~~yd~lvlAtG~~~~ 114 (388)
.+... +. ...+|.||+|+|..+.
T Consensus 217 i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~ 253 (335)
T 2zbw_A 217 VEGDERVRWAVVFHNQTQEELALEVDAVLILAGYITK 253 (335)
T ss_dssp EEESSSEEEEEEEETTTCCEEEEECSEEEECCCEEEE
T ss_pred EccCCCeeEEEEEECCCCceEEEecCEEEEeecCCCC
Confidence 13332 22 2379999999997663
No 209
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.74 E-value=2e-05 Score=74.65 Aligned_cols=39 Identities=33% Similarity=0.313 Sum_probs=36.7
Q ss_pred CcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCce
Q psy4525 14 PNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLV 54 (388)
Q Consensus 14 ~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~ 54 (388)
++|+|||||++|+++|..|.+ .|.+|+|+|+.+.+||.+
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~--~g~~v~v~E~~~~~GG~~ 40 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKK--LNKKVLVIEKRNHIGGNA 40 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGG--GTCCEEEECSSSSSSGGG
T ss_pred CCEEEECcCHHHHHHHHHHHh--CCCcEEEEecCCCCCcce
Confidence 589999999999999999999 799999999999999876
No 210
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=97.73 E-value=2.1e-05 Score=76.97 Aligned_cols=40 Identities=23% Similarity=0.204 Sum_probs=36.9
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCC--CcEEEEcCCCCCCCce
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQ--STVDIYEKLPVPFGLV 54 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g--~~v~lie~~~~~gg~~ 54 (388)
.++|+|||||++|+++|..|.+ .| .+|+|+|+.+.+||.+
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~--~g~~~~v~v~E~~~~~GG~~ 45 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAER--AFPDLNITLLEAGERLGGKV 45 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHH--HCTTSEEEEECSSSSSBTTC
T ss_pred cccEEEECCCHHHHHHHHHHHH--hCCCCCEEEEECCCCCCcee
Confidence 4799999999999999999999 67 9999999999998865
No 211
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.72 E-value=6.5e-05 Score=73.39 Aligned_cols=91 Identities=9% Similarity=0.027 Sum_probs=68.7
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCCCCCCcchhHHHHHHHHhhcCCCcEEEceEEEEE
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTKTGDNPRVNFYGNICLGQ 91 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 91 (388)
.+++++|||+|+.|+.+|..+.+ .+.+|+++++.+.+. |. ...++...+.+.+++.|++++.++.+..
T Consensus 169 ~~~~v~ViGgG~~g~e~A~~l~~--~g~~Vt~v~~~~~~l--------~~--~~~~~~~~l~~~l~~~Gv~i~~~~~v~~ 236 (463)
T 4dna_A 169 LPESILIAGGGYIAVEFANIFHG--LGVKTTLIYRGKEIL--------SR--FDQDMRRGLHAAMEEKGIRILCEDIIQS 236 (463)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSSS--------TT--SCHHHHHHHHHHHHHTTCEEECSCCEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHH--cCCeEEEEEcCCccc--------cc--cCHHHHHHHHHHHHHCCCEEECCCEEEE
Confidence 46899999999999999999999 899999999886542 21 2345667777778888999998765532
Q ss_pred ---------Eee-ecccccccCEEEEeeCCCCC
Q psy4525 92 ---------DIS-LGDLTNAYHAVVLTYGADND 114 (388)
Q Consensus 92 ---------~~~-~~~~~~~yd~lvlAtG~~~~ 114 (388)
.+. ..+++..+|.||+|+|..|.
T Consensus 237 i~~~~~~~~~v~~~~~g~i~aD~Vv~a~G~~p~ 269 (463)
T 4dna_A 237 VSADADGRRVATTMKHGEIVADQVMLALGRMPN 269 (463)
T ss_dssp EEECTTSCEEEEESSSCEEEESEEEECSCEEES
T ss_pred EEEcCCCEEEEEEcCCCeEEeCEEEEeeCcccC
Confidence 123 33333578999999997663
No 212
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=97.72 E-value=2.9e-05 Score=74.56 Aligned_cols=36 Identities=22% Similarity=0.355 Sum_probs=33.3
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCc-EEEEcCCCCC
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQST-VDIYEKLPVP 50 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~-v~lie~~~~~ 50 (388)
.++|+||||||+|+++|..|++ .|.+ |+|||+.+.+
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~--~G~~~v~v~E~~~~~ 40 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQ--AGIGKVTLLESSSEI 40 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCSEEEEEESSSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHh--CCCCeEEEEECCCCc
Confidence 4799999999999999999999 8999 9999998664
No 213
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=97.72 E-value=9.5e-05 Score=69.54 Aligned_cols=98 Identities=16% Similarity=0.177 Sum_probs=63.6
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCCCCCCcchhHHHHHHHHhhcCCC-cEEEceEEEE
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTKTGDNPR-VNFYGNICLG 90 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~~-i~~~~~~~v~ 90 (388)
..++|+|||+|++|+.+|..|.+ .+.+|+++++.+.+... ...|.........+.+.+.+++.+ ++++.++.+.
T Consensus 165 ~~~~vvVvG~G~~g~e~a~~l~~--~g~~V~lv~~~~~~~~~---~~d~~~~~~~~~~~~l~~~l~~~g~v~~~~~~~v~ 239 (369)
T 3d1c_A 165 NKGQYVVIGGNESGFDAAYQLAK--NGSDIALYTSTTGLNDP---DADPSVRLSPYTRQRLGNVIKQGARIEMNVHYTVK 239 (369)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHH--TTCEEEEECC-------------CTTSCCHHHHHHHHHHHHTTCCEEEECSCCEE
T ss_pred CCCEEEEECCCcCHHHHHHHHHh--cCCeEEEEecCCCCCCC---CCCCCccCCHHHHHHHHHHHhhCCcEEEecCcEEE
Confidence 35699999999999999999999 89999999988653210 011222233455666777777786 9998775542
Q ss_pred E--------Eeeeccccc--ccCEEEEeeCCCCC
Q psy4525 91 Q--------DISLGDLTN--AYHAVVLTYGADND 114 (388)
Q Consensus 91 ~--------~~~~~~~~~--~yd~lvlAtG~~~~ 114 (388)
. .+...+++. .+|.+|+|||..+.
T Consensus 240 ~i~~~~~~~~v~~~~g~~~~~~d~vi~a~G~~~~ 273 (369)
T 3d1c_A 240 DIDFNNGQYHISFDSGQSVHTPHEPILATGFDAT 273 (369)
T ss_dssp EEEEETTEEEEEESSSCCEEESSCCEECCCBCGG
T ss_pred EEEecCCceEEEecCCeEeccCCceEEeeccCCc
Confidence 2 123333332 36999999997763
No 214
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=97.72 E-value=3.4e-05 Score=74.67 Aligned_cols=39 Identities=26% Similarity=0.409 Sum_probs=34.9
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCC-cEEEEcCCCCCCC
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQS-TVDIYEKLPVPFG 52 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~-~v~lie~~~~~gg 52 (388)
..+||+|||||++|+++|..|++ .|. +|+|+|+.+..++
T Consensus 5 ~~~dVvIIGgG~aGlsaA~~La~--~G~~~V~vlE~~~~~~~ 44 (438)
T 3dje_A 5 KSSSLLIVGAGTWGTSTALHLAR--RGYTNVTVLDPYPVPSA 44 (438)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHH--TTCCCEEEEESSCSSCT
T ss_pred CCCCEEEECCCHHHHHHHHHHHH--cCCCcEEEEeCCCCCCC
Confidence 45799999999999999999999 899 9999999876543
No 215
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.71 E-value=2.4e-05 Score=77.15 Aligned_cols=41 Identities=32% Similarity=0.354 Sum_probs=38.3
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCce
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLV 54 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~ 54 (388)
.+++|+|||||++|+++|..|++ .|.+|+|+|+.+.+||.+
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~--~g~~v~vlE~~~~~gg~~ 72 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAG--AGHQVTVLEASERPGGRV 72 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHH--HTCEEEEECSSSSSBTTC
T ss_pred CCCCEEEECCCHHHHHHHHHHHh--CCCeEEEEECCCCCCCce
Confidence 46899999999999999999999 799999999999999876
No 216
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=97.70 E-value=6.7e-05 Score=73.78 Aligned_cols=92 Identities=14% Similarity=0.125 Sum_probs=68.5
Q ss_pred CCCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCCCCCCcchhHHHHHHHHhhcCCCcEEEceEEEE
Q psy4525 11 QLKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTKTGDNPRVNFYGNICLG 90 (388)
Q Consensus 11 ~~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~ 90 (388)
..+++++|||+|+.|+.+|..+++ .|.+|+++++.+.+. |. ...++...+.+.+++.|++++.++.+.
T Consensus 189 ~~~~~v~ViGgG~~g~e~A~~l~~--~g~~Vtli~~~~~~l--------~~--~~~~~~~~l~~~l~~~Gv~i~~~~~V~ 256 (484)
T 3o0h_A 189 KLPKSIVIVGGGYIGVEFANIFHG--LGVKTTLLHRGDLIL--------RN--FDYDLRQLLNDAMVAKGISIIYEATVS 256 (484)
T ss_dssp SCCSEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSSS--------TT--SCHHHHHHHHHHHHHHTCEEESSCCEE
T ss_pred hcCCcEEEECcCHHHHHHHHHHHH--cCCeEEEEECCCccc--------cc--cCHHHHHHHHHHHHHCCCEEEeCCEEE
Confidence 346899999999999999999999 899999999886542 22 234466667777777899999876653
Q ss_pred E--------Eeeeccc-ccccCEEEEeeCCCCC
Q psy4525 91 Q--------DISLGDL-TNAYHAVVLTYGADND 114 (388)
Q Consensus 91 ~--------~~~~~~~-~~~yd~lvlAtG~~~~ 114 (388)
. .+...+. ...+|.||+|+|..+.
T Consensus 257 ~i~~~~~~v~v~~~~g~~i~aD~Vi~A~G~~p~ 289 (484)
T 3o0h_A 257 QVQSTENCYNVVLTNGQTICADRVMLATGRVPN 289 (484)
T ss_dssp EEEECSSSEEEEETTSCEEEESEEEECCCEEEC
T ss_pred EEEeeCCEEEEEECCCcEEEcCEEEEeeCCCcC
Confidence 2 1333333 3479999999997663
No 217
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=97.69 E-value=7e-05 Score=71.56 Aligned_cols=110 Identities=10% Similarity=0.039 Sum_probs=63.8
Q ss_pred CCeEEEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecCcccccCCHHHHHHHhcCCCceEEec
Q psy4525 152 CEEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRGALQVAFTIKEFREMTKLPHVQTVFR 231 (388)
Q Consensus 152 ~~~vvVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~~~~~~~~~~el~~l~~~~~~~~~~~ 231 (388)
+|||+|||+|..|+.+|..|.+ ....-+|++|.+++..........+. .....
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~-------------------~~~~~~Vtlie~~~~~~~~p~~~~v~--~g~~~------ 54 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKL-------------------ADPSIEVTLIEPNETYYTCYMSNEVI--GGDRE------ 54 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-------------------HCTTSEEEEECSCSSEECSTTHHHHH--HTSSC------
T ss_pred cCEEEEECCcHHHHHHHHHHHh-------------------cCcCCeEEEEeCCCCCCCccCHHHHh--cCCCC------
Confidence 7999999999999999997751 11223799999887643332222210 00000
Q ss_pred ccccccchhhhccccchhhHHHHHHHhhCCCCCCCCCCceeEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEE
Q psy4525 232 NEQLCGVHEASATLARPRKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELI 311 (388)
Q Consensus 232 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l 311 (388)
+..+.+..+. +. +.|++++.. .++.+..+ .+. +.+.++.++
T Consensus 55 ----------~~~~~~~~~~----~~------------~~gv~~i~~-~v~~id~~--~~~----------v~~~~g~~i 95 (401)
T 3vrd_B 55 ----------LASLRVGYDG----LR------------AHGIQVVHD-SALGIDPD--KKL----------VKTAGGAEF 95 (401)
T ss_dssp ----------GGGGEECSHH----HH------------HTTCEEECS-CEEEEETT--TTE----------EEETTSCEE
T ss_pred ----------HHHHhhCHHH----HH------------HCCCEEEEe-EEEEEEcc--CcE----------EEeccccee
Confidence 0000011111 11 356777543 56666542 221 224566789
Q ss_pred ecceEEEccccCCccC
Q psy4525 312 PSGIAFRSIGYQSRCV 327 (388)
Q Consensus 312 ~~D~Vi~a~G~~p~~~ 327 (388)
.+|.+|+|||.+++..
T Consensus 96 ~yd~LviAtG~~~~~~ 111 (401)
T 3vrd_B 96 AYDRCVVAPGIDLLYD 111 (401)
T ss_dssp ECSEEEECCCEEECGG
T ss_pred ecceeeeccCCccccC
Confidence 9999999999987653
No 218
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.65 E-value=0.00011 Score=72.29 Aligned_cols=93 Identities=16% Similarity=0.043 Sum_probs=66.3
Q ss_pred CCcEEEECccHHHHHHHHHHHhhC--CCCcEEEEcCCCCCCCceeeCCCCCCcchhHHHHHHHHhhcCCCcEEEceEEEE
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLL--PQSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTKTGDNPRVNFYGNICLG 90 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~--~g~~v~lie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~ 90 (388)
.++|+|||+|+.|+.+|..|.+.. .+.+|+++++.+.+.+ .....++...+.+.+++.|++++.++.+.
T Consensus 180 ~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~---------~~l~~~~~~~~~~~l~~~GV~v~~~~~V~ 250 (493)
T 1m6i_A 180 VKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMG---------KILPEYLSNWTMEKVRREGVKVMPNAIVQ 250 (493)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTT---------TTSCHHHHHHHHHHHHTTTCEEECSCCEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCccccc---------ccCCHHHHHHHHHHHHhcCCEEEeCCEEE
Confidence 579999999999999999987621 3689999998754211 11224566677778888999999886543
Q ss_pred E--------Eeeecccc-cccCEEEEeeCCCCC
Q psy4525 91 Q--------DISLGDLT-NAYHAVVLTYGADND 114 (388)
Q Consensus 91 ~--------~~~~~~~~-~~yd~lvlAtG~~~~ 114 (388)
. .+.+.+++ ..+|.||+|+|..+.
T Consensus 251 ~i~~~~~~~~v~l~dG~~i~aD~Vv~a~G~~pn 283 (493)
T 1m6i_A 251 SVGVSSGKLLIKLKDGRKVETDHIVAAVGLEPN 283 (493)
T ss_dssp EEEEETTEEEEEETTSCEEEESEEEECCCEEEC
T ss_pred EEEecCCeEEEEECCCCEEECCEEEECCCCCcc
Confidence 2 13333333 379999999998764
No 219
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=97.65 E-value=3.1e-05 Score=75.00 Aligned_cols=35 Identities=26% Similarity=0.430 Sum_probs=31.6
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCC
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLP 48 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~ 48 (388)
.+++|+||||||+|+++|..|++ .|++|+|||+.+
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~--~G~~V~viE~~~ 55 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQ--HDVDVTVYTDRK 55 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHH--TTCEEEEEESCC
T ss_pred CCCCEEEECCcHHHHHHHHHHHH--CCCeEEEEcCCC
Confidence 34799999999999999999999 899999999875
No 220
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=97.64 E-value=0.0001 Score=73.42 Aligned_cols=47 Identities=21% Similarity=0.288 Sum_probs=38.0
Q ss_pred ceeEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEecceEEEccccCCc
Q psy4525 270 SKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPSGIAFRSIGYQSR 325 (388)
Q Consensus 270 ~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~p~ 325 (388)
+.|+++++++.++++..+ ++.+..+.+ .+++++.||.||+|+|..+.
T Consensus 232 ~~Gv~I~~~t~V~~I~~~-~~~v~gV~l--------~~G~~i~Ad~VVlA~G~~s~ 278 (549)
T 3nlc_A 232 ELGGEIRFSTRVDDLHME-DGQITGVTL--------SNGEEIKSRHVVLAVGHSAR 278 (549)
T ss_dssp HTTCEEESSCCEEEEEES-SSBEEEEEE--------TTSCEEECSCEEECCCTTCH
T ss_pred hcCCEEEeCCEEEEEEEe-CCEEEEEEE--------CCCCEEECCEEEECCCCChh
Confidence 468999999999999875 456766765 34457999999999999885
No 221
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.64 E-value=4.9e-05 Score=73.65 Aligned_cols=41 Identities=15% Similarity=0.079 Sum_probs=38.3
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCce
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLV 54 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~ 54 (388)
..++|+|||+|++|+++|..|++ .|.+|+++|+++.+||.+
T Consensus 5 ~~~~v~iiG~G~~gl~~a~~l~~--~g~~v~~~e~~~~~gg~~ 45 (433)
T 1d5t_A 5 EEYDVIVLGTGLTECILSGIMSV--NGKKVLHMDRNPYYGGES 45 (433)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSSCTTS
T ss_pred CcCCEEEECcCHHHHHHHHHHHH--CCCcEEEEecCCCccccc
Confidence 45799999999999999999999 899999999999999876
No 222
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=97.63 E-value=3.9e-05 Score=73.20 Aligned_cols=36 Identities=28% Similarity=0.397 Sum_probs=33.0
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCC
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVP 50 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~ 50 (388)
.+||+|||||++|+++|..|++ .|.+|+|+|+.+..
T Consensus 4 ~~DVvIIGaG~~Gl~~A~~La~--~G~~V~vlE~~~~~ 39 (397)
T 2oln_A 4 SYDVVVVGGGPVGLATAWQVAE--RGHRVLVLERHTFF 39 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH--TTCCEEEEESSCTT
T ss_pred cCCEEEECCCHHHHHHHHHHHH--CCCeEEEEeCCCCC
Confidence 3699999999999999999999 89999999998654
No 223
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.62 E-value=0.00016 Score=71.69 Aligned_cols=90 Identities=13% Similarity=0.180 Sum_probs=64.4
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCCCCCCcchhHHHHHHHHhhcCCCcEEEceEEEEE
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTKTGDNPRVNFYGNICLGQ 91 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 91 (388)
.+++++|||+|+.|+.+|..|++ .|.+|+++++. .+. |. ...++...+.+.+++.|++++.++.+..
T Consensus 209 ~~~~vvVIGgG~ig~E~A~~l~~--~G~~Vtlv~~~-~~l--------~~--~d~~~~~~~~~~l~~~GV~v~~~~~v~~ 275 (519)
T 3qfa_A 209 CPGKTLVVGASYVALECAGFLAG--IGLDVTVMVRS-ILL--------RG--FDQDMANKIGEHMEEHGIKFIRQFVPIK 275 (519)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHH--TTCCEEEEESS-CSS--------TT--SCHHHHHHHHHHHHHTTCEEEESEEEEE
T ss_pred cCCeEEEECCcHHHHHHHHHHHH--cCCeEEEEecc-ccc--------cc--CCHHHHHHHHHHHHHCCCEEEeCCeEEE
Confidence 45789999999999999999999 89999999975 221 22 2345666777778888999988754321
Q ss_pred E------------eee--ccc----ccccCEEEEeeCCCCC
Q psy4525 92 D------------ISL--GDL----TNAYHAVVLTYGADND 114 (388)
Q Consensus 92 ~------------~~~--~~~----~~~yd~lvlAtG~~~~ 114 (388)
. ++. .+. ...+|.||+|+|..|.
T Consensus 276 v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G~~p~ 316 (519)
T 3qfa_A 276 VEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDAC 316 (519)
T ss_dssp EEEEECCTTCEEEEEEEESSSSCEEEEEESEEEECSCEEES
T ss_pred EEEccCCCCceEEEEEEECCCcEEEEEECCEEEEecCCccc
Confidence 1 111 122 1258999999997663
No 224
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=97.60 E-value=0.00026 Score=65.31 Aligned_cols=118 Identities=14% Similarity=0.095 Sum_probs=69.5
Q ss_pred CeEEEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecCcccccCCHHHHHHHhcCCCceEEecc
Q psy4525 153 EEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRGALQVAFTIKEFREMTKLPHVQTVFRN 232 (388)
Q Consensus 153 ~~vvVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~~~~~~~~~~el~~l~~~~~~~~~~~~ 232 (388)
.+|+|||+|..|+.+|..|+ +.+ .+|+++.+.+.+--. +.. ..|..... .
T Consensus 8 ~~vvIIG~G~aGl~aA~~l~--------------------~~g-~~v~lie~~~~~gG~-----~~~--~~~~~~~~-~- 57 (332)
T 3lzw_A 8 YDITIIGGGPVGLFTAFYGG--------------------MRQ-ASVKIIESLPQLGGQ-----LSA--LYPEKYIY-D- 57 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHH--------------------HTT-CCEEEECSSSSSCHH-----HHH--HCTTSEEC-C-
T ss_pred ceEEEECCCHHHHHHHHHHH--------------------HCC-CCEEEEEcCCCCCce-----ehh--cCCCceEe-c-
Confidence 58999999999999999776 234 369999987642100 000 01111000 0
Q ss_pred cccccchhhhccccc-hhhHHHHHHHhhCCCCCCCCCCceeEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEE
Q psy4525 233 EQLCGVHEASATLAR-PRKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELI 311 (388)
Q Consensus 233 ~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l 311 (388)
.+ ..+. ....+...+...+. +.++.++++..++.+..++++. ..+. +.+++ +
T Consensus 58 --------~~-~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~v~~i~~~~~~~-~~v~--------~~~g~-~ 110 (332)
T 3lzw_A 58 --------VA-GFPKIRAQELINNLKEQMA--------KFDQTICLEQAVESVEKQADGV-FKLV--------TNEET-H 110 (332)
T ss_dssp --------ST-TCSSEEHHHHHHHHHHHHT--------TSCCEEECSCCEEEEEECTTSC-EEEE--------ESSEE-E
T ss_pred --------cC-CCCCCCHHHHHHHHHHHHH--------HhCCcEEccCEEEEEEECCCCc-EEEE--------ECCCE-E
Confidence 00 0010 12334444444332 4579999999999998754322 2232 33444 9
Q ss_pred ecceEEEcccc---CCccC
Q psy4525 312 PSGIAFRSIGY---QSRCV 327 (388)
Q Consensus 312 ~~D~Vi~a~G~---~p~~~ 327 (388)
.+|.||+|||. .|..+
T Consensus 111 ~~d~vVlAtG~~~~~p~~~ 129 (332)
T 3lzw_A 111 YSKTVIITAGNGAFKPRKL 129 (332)
T ss_dssp EEEEEEECCTTSCCEECCC
T ss_pred EeCEEEECCCCCcCCCCCC
Confidence 99999999999 66543
No 225
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.59 E-value=0.00015 Score=71.27 Aligned_cols=89 Identities=12% Similarity=0.161 Sum_probs=65.5
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCCCCCCcchhHHHHHHHHhhcCCCcEEEceEEEEE
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTKTGDNPRVNFYGNICLGQ 91 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 91 (388)
.+++++|||+|+.|+.+|..+++ .|.+|+++++.... |. ...++...+.+.+++.|++++.++.+..
T Consensus 186 ~~~~vvViGgG~~g~E~A~~l~~--~g~~Vtlv~~~~~l---------~~--~d~~~~~~l~~~l~~~Gv~i~~~~~v~~ 252 (483)
T 3dgh_A 186 EPGKTLVVGAGYIGLECAGFLKG--LGYEPTVMVRSIVL---------RG--FDQQMAELVAASMEERGIPFLRKTVPLS 252 (483)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESSCSS---------TT--SCHHHHHHHHHHHHHTTCCEEETEEEEE
T ss_pred cCCcEEEECCCHHHHHHHHHHHH--cCCEEEEEeCCCCC---------cc--cCHHHHHHHHHHHHhCCCEEEeCCEEEE
Confidence 45799999999999999999999 89999999975211 22 2345666777778888999998866532
Q ss_pred E---------eeeccc------ccccCEEEEeeCCCC
Q psy4525 92 D---------ISLGDL------TNAYHAVVLTYGADN 113 (388)
Q Consensus 92 ~---------~~~~~~------~~~yd~lvlAtG~~~ 113 (388)
. +...+. ...+|.||+|+|..|
T Consensus 253 i~~~~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~~p 289 (483)
T 3dgh_A 253 VEKQDDGKLLVKYKNVETGEESEDVYDTVLWAIGRKG 289 (483)
T ss_dssp EEECTTSCEEEEEEETTTCCEEEEEESEEEECSCEEE
T ss_pred EEEcCCCcEEEEEecCCCCceeEEEcCEEEECccccc
Confidence 1 222221 237899999999766
No 226
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.58 E-value=6.1e-05 Score=77.06 Aligned_cols=42 Identities=29% Similarity=0.293 Sum_probs=38.8
Q ss_pred CCCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCce
Q psy4525 11 QLKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLV 54 (388)
Q Consensus 11 ~~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~ 54 (388)
...++|+|||+|++|+++|..|.+ .|++|+|+|+.+.+||.+
T Consensus 105 ~~~~~v~viG~G~~gl~~a~~l~~--~g~~v~~~e~~~~~gg~~ 146 (662)
T 2z3y_A 105 KKTGKVIIIGSGVSGLAAARQLQS--FGMDVTLLEARDRVGGRV 146 (662)
T ss_dssp SCCCEEEEECCBHHHHHHHHHHHH--TTCEEEEECSSSSSBTTC
T ss_pred cCCCeEEEECcCHHHHHHHHHHHH--CCCeEEEEecCCCCCCcc
Confidence 346899999999999999999999 899999999999999875
No 227
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.57 E-value=0.0002 Score=70.40 Aligned_cols=89 Identities=10% Similarity=0.078 Sum_probs=65.5
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCCCCCCcchhHHHHHHHHhhcCCCcEEEceEEEEE
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTKTGDNPRVNFYGNICLGQ 91 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 91 (388)
.+++++|||+|+.|+.+|..+++ .|.+|+++++...+ |. ...++...+.+.+++.|++++.++.+..
T Consensus 184 ~~~~vvViGgG~ig~E~A~~l~~--~g~~Vtlv~~~~~l---------~~--~d~~~~~~l~~~l~~~gv~~~~~~~v~~ 250 (488)
T 3dgz_A 184 SPGKTLVVGASYVALECAGFLTG--IGLDTTVMMRSIPL---------RG--FDQQMSSLVTEHMESHGTQFLKGCVPSH 250 (488)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHH--TTCCEEEEESSCSS---------TT--SCHHHHHHHHHHHHHTTCEEEETEEEEE
T ss_pred cCCeEEEECCCHHHHHHHHHHHH--cCCceEEEEcCccc---------cc--CCHHHHHHHHHHHHHCCCEEEeCCEEEE
Confidence 45789999999999999999999 89999999986321 22 2345667777778888999998765532
Q ss_pred E---------eeecc---cc---cccCEEEEeeCCCC
Q psy4525 92 D---------ISLGD---LT---NAYHAVVLTYGADN 113 (388)
Q Consensus 92 ~---------~~~~~---~~---~~yd~lvlAtG~~~ 113 (388)
. +...+ .+ ..+|.||+|+|..|
T Consensus 251 i~~~~~~~~~v~~~~~~~g~~~~~~~D~vi~a~G~~p 287 (488)
T 3dgz_A 251 IKKLPTNQLQVTWEDHASGKEDTGTFDTVLWAIGRVP 287 (488)
T ss_dssp EEECTTSCEEEEEEETTTTEEEEEEESEEEECSCEEE
T ss_pred EEEcCCCcEEEEEEeCCCCeeEEEECCEEEEcccCCc
Confidence 1 22221 22 36899999999766
No 228
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=97.55 E-value=0.00016 Score=67.84 Aligned_cols=89 Identities=15% Similarity=0.190 Sum_probs=62.7
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCCCCCCcchhHHHHHHHHhhcCCCcEEEceEEEEE
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTKTGDNPRVNFYGNICLGQ 91 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 91 (388)
..++|+|||+|+.|+.+|..|.+ .+.+|+++++.+.+. +. ..+...+.+..++.+++++.++.+..
T Consensus 162 ~~~~vvVvG~G~~g~e~A~~l~~--~g~~V~lv~~~~~~~--------~~----~~~~~~l~~~~~~~gv~i~~~~~v~~ 227 (360)
T 3ab1_A 162 KGKRVVIVGGGDSALDWTVGLIK--NAASVTLVHRGHEFQ--------GH----GKTAHEVERARANGTIDVYLETEVAS 227 (360)
T ss_dssp TTCEEEEECSSHHHHHHHHHTTT--TSSEEEEECSSSSCS--------SC----SHHHHSSHHHHHHTSEEEESSEEEEE
T ss_pred CCCcEEEECCCHHHHHHHHHHHh--cCCEEEEEEcCCCCC--------CC----HHHHHHHHHHhhcCceEEEcCcCHHH
Confidence 35799999999999999999999 799999999886542 11 12334444455567899888765521
Q ss_pred ---------Eeeec--cc---ccccCEEEEeeCCCCC
Q psy4525 92 ---------DISLG--DL---TNAYHAVVLTYGADND 114 (388)
Q Consensus 92 ---------~~~~~--~~---~~~yd~lvlAtG~~~~ 114 (388)
.+.+. +. ...+|.||+|+|..+.
T Consensus 228 i~~~~~~v~~v~~~~~~g~~~~i~~D~vi~a~G~~p~ 264 (360)
T 3ab1_A 228 IEESNGVLTRVHLRSSDGSKWTVEADRLLILIGFKSN 264 (360)
T ss_dssp EEEETTEEEEEEEEETTCCEEEEECSEEEECCCBCCS
T ss_pred hccCCCceEEEEEEecCCCeEEEeCCEEEECCCCCCC
Confidence 12332 22 2379999999997763
No 229
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=97.55 E-value=5.8e-05 Score=74.76 Aligned_cols=40 Identities=20% Similarity=0.237 Sum_probs=36.2
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCce
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLV 54 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~ 54 (388)
.+||||||+|+||+++|..|++ .|.+|+|+|+.+.+||..
T Consensus 41 ~~DVvVVGaG~AGl~AA~~aa~--~G~~V~vlEk~~~~GG~s 80 (510)
T 4at0_A 41 EADVVVAGYGIAGVAASIEAAR--AGADVLVLERTSGWGGAT 80 (510)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSSCTTG
T ss_pred cCCEEEECCCHHHHHHHHHHHH--CCCcEEEEeCCCCCCCcc
Confidence 4689999999999999999999 899999999998877643
No 230
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=97.55 E-value=8.2e-05 Score=70.05 Aligned_cols=36 Identities=22% Similarity=0.285 Sum_probs=32.7
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCC
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPV 49 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~ 49 (388)
..+||+|||||++|+++|..|++ .|.+|+|+|+...
T Consensus 5 ~~~dVvVIG~Gi~Gls~A~~La~--~G~~V~vle~~~~ 40 (363)
T 1c0p_A 5 SQKRVVVLGSGVIGLSSALILAR--KGYSVHILARDLP 40 (363)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESSCT
T ss_pred CCCCEEEECCCHHHHHHHHHHHh--CCCEEEEEeccCC
Confidence 34799999999999999999999 8999999998753
No 231
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.55 E-value=0.0002 Score=69.77 Aligned_cols=39 Identities=13% Similarity=0.191 Sum_probs=33.7
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCC
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVP 50 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~ 50 (388)
..++|+|||+|..|+.+|..|.+..++.+|+++++.+.+
T Consensus 226 ~~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~ 264 (463)
T 3s5w_A 226 KPMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASAL 264 (463)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSC
T ss_pred CCCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCC
Confidence 468999999999999999999995448999999998654
No 232
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=97.54 E-value=7.7e-05 Score=76.50 Aligned_cols=37 Identities=24% Similarity=0.326 Sum_probs=33.6
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCC
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPF 51 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~g 51 (388)
.+||+|||||++|+++|..|++ .|.+|+|+|+.+.+|
T Consensus 272 ~~DVvIIGgGiaGlsaA~~La~--~G~~V~vlEk~~~~g 308 (676)
T 3ps9_A 272 KREAAIIGGGIASALLSLALLR--RGWQVTLYCADEAPA 308 (676)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT--TTCEEEEEESSSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHH--CCCeEEEEeCCCccc
Confidence 4799999999999999999999 899999999976554
No 233
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=97.54 E-value=0.00031 Score=63.63 Aligned_cols=113 Identities=12% Similarity=0.012 Sum_probs=64.0
Q ss_pred CeEEEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecCcccccCCHHHHHHHhcCCCceEEecc
Q psy4525 153 EEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRGALQVAFTIKEFREMTKLPHVQTVFRN 232 (388)
Q Consensus 153 ~~vvVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~~~~~~~~~~el~~l~~~~~~~~~~~~ 232 (388)
.+|+|||+|.+|+.+|..|+ +.+ .+|+++.+....... +...
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~--------------------~~g-~~v~lie~~~~~~~~------------~~~~----- 44 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLG--------------------RAR-KNILLVDAGERRNRF------------ASHS----- 44 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHH--------------------HTT-CCEEEEECCCCGGGG------------CSCC-----
T ss_pred CCEEEECCCHHHHHHHHHHH--------------------hCC-CCEEEEeCCCccccc------------chhh-----
Confidence 47999999999999999876 344 369999986432110 0000
Q ss_pred cccccchhhhccccchhhHHHHHHHhhCCCCCCCCCCceeEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEe
Q psy4525 233 EQLCGVHEASATLARPRKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIP 312 (388)
Q Consensus 233 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~ 312 (388)
...+..-......+...+...+. ...++.++. ..++.+..++++ ..+. +.+++++.
T Consensus 45 ------~~~~~~~~~~~~~~~~~~~~~~~-------~~~~v~~~~-~~v~~i~~~~~~--~~v~--------~~~g~~~~ 100 (297)
T 3fbs_A 45 ------HGFLGQDGKAPGEIIAEARRQIE-------RYPTIHWVE-GRVTDAKGSFGE--FIVE--------IDGGRRET 100 (297)
T ss_dssp ------CSSTTCTTCCHHHHHHHHHHHHT-------TCTTEEEEE-SCEEEEEEETTE--EEEE--------ETTSCEEE
T ss_pred ------cCCcCCCCCCHHHHHHHHHHHHH-------hcCCeEEEE-eEEEEEEEcCCe--EEEE--------ECCCCEEE
Confidence 00000000111233333333332 123677754 477777654322 2232 34456899
Q ss_pred cceEEEccccCCccC
Q psy4525 313 SGIAFRSIGYQSRCV 327 (388)
Q Consensus 313 ~D~Vi~a~G~~p~~~ 327 (388)
+|.||+|||.+|...
T Consensus 101 ~d~vviAtG~~~~~~ 115 (297)
T 3fbs_A 101 AGRLILAMGVTDELP 115 (297)
T ss_dssp EEEEEECCCCEEECC
T ss_pred cCEEEECCCCCCCCC
Confidence 999999999987653
No 234
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=97.53 E-value=7.8e-05 Score=70.67 Aligned_cols=37 Identities=22% Similarity=0.357 Sum_probs=33.4
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCC
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPF 51 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~g 51 (388)
.+||+|||||++|+++|..|++ .|.+|+|+|+.+..+
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~--~G~~V~vie~~~~~~ 39 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAK--QGVKTLLVDAFDPPH 39 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSCSSC
T ss_pred cCCEEEECCCHHHHHHHHHHHh--CCCeEEEEeCCCCCC
Confidence 4699999999999999999999 899999999986544
No 235
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.53 E-value=7.8e-05 Score=77.95 Aligned_cols=42 Identities=29% Similarity=0.293 Sum_probs=38.7
Q ss_pred CCCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCce
Q psy4525 11 QLKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLV 54 (388)
Q Consensus 11 ~~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~ 54 (388)
...++|+|||+|++||++|..|.+ .|++|+|||+.+.+||.+
T Consensus 276 ~~~~~v~viG~G~aGl~~A~~l~~--~g~~v~v~E~~~~~GG~~ 317 (852)
T 2xag_A 276 KKTGKVIIIGSGVSGLAAARQLQS--FGMDVTLLEARDRVGGRV 317 (852)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSSCTTC
T ss_pred CCCCeEEEECCCHHHHHHHHHHHH--CCCcEEEEEecCcCCCce
Confidence 346899999999999999999999 899999999999999875
No 236
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.53 E-value=7.5e-05 Score=73.08 Aligned_cols=42 Identities=24% Similarity=0.328 Sum_probs=37.3
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCC-cEEEEcCCCCCCCcee
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQS-TVDIYEKLPVPFGLVR 55 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~-~v~lie~~~~~gg~~~ 55 (388)
..++|+|||||++|+++|..|.+ .|. +|+|+|+.+.+||.+.
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~--~g~~~v~~~e~~~~~gg~~~ 45 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSE--AGITDLLILEATDHIGGRMH 45 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHH--TTCCCEEEECSSSSSBTTSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHh--cCCCceEEEeCCCCCCCcee
Confidence 35799999999999999999999 898 8999999999998763
No 237
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=97.53 E-value=0.00022 Score=65.41 Aligned_cols=111 Identities=13% Similarity=0.101 Sum_probs=64.5
Q ss_pred CeEEEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeec--CcccccCCHHHHHHHhcCCCceEEe
Q psy4525 153 EEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRR--GALQVAFTIKEFREMTKLPHVQTVF 230 (388)
Q Consensus 153 ~~vvVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~--~~~~~~~~~~el~~l~~~~~~~~~~ 230 (388)
.+|+|||+|..|+.+|..|+ +.+. +|+++.+. +.+...-. +...|..
T Consensus 16 ~~vvIIG~G~aGl~aA~~l~--------------------~~g~-~v~lie~~~gg~~~~~~~------~~~~~~~---- 64 (323)
T 3f8d_A 16 FDVIIVGLGPAAYGAALYSA--------------------RYML-KTLVIGETPGGQLTEAGI------VDDYLGL---- 64 (323)
T ss_dssp EEEEEECCSHHHHHHHHHHH--------------------HTTC-CEEEEESSTTGGGGGCCE------ECCSTTS----
T ss_pred cCEEEECccHHHHHHHHHHH--------------------HCCC-cEEEEeccCCCeeccccc------ccccCCC----
Confidence 58999999999999999876 2443 59999986 22211000 0000000
Q ss_pred cccccccchhhhccccchhhHHHHHHHhhCCCCCCCCCCceeEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeE
Q psy4525 231 RNEQLCGVHEASATLARPRKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTEL 310 (388)
Q Consensus 231 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~ 310 (388)
. ......+...+..... +.++++++ ..++++..++ +. ..+. +.++.+
T Consensus 65 -----------~---~~~~~~~~~~~~~~~~--------~~~v~~~~-~~v~~i~~~~-~~-~~v~--------~~~g~~ 111 (323)
T 3f8d_A 65 -----------I---EIQASDMIKVFNKHIE--------KYEVPVLL-DIVEKIENRG-DE-FVVK--------TKRKGE 111 (323)
T ss_dssp -----------T---TEEHHHHHHHHHHHHH--------TTTCCEEE-SCEEEEEEC---C-EEEE--------ESSSCE
T ss_pred -----------C---CCCHHHHHHHHHHHHH--------HcCCEEEE-EEEEEEEecC-CE-EEEE--------ECCCCE
Confidence 0 0011223333332221 45778888 7888887643 22 2222 344568
Q ss_pred EecceEEEccccCCccC
Q psy4525 311 IPSGIAFRSIGYQSRCV 327 (388)
Q Consensus 311 l~~D~Vi~a~G~~p~~~ 327 (388)
+.+|.||+|+|..|..+
T Consensus 112 ~~~d~lvlAtG~~~~~~ 128 (323)
T 3f8d_A 112 FKADSVILGIGVKRRKL 128 (323)
T ss_dssp EEEEEEEECCCCEECCC
T ss_pred EEcCEEEECcCCCCccC
Confidence 99999999999987654
No 238
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=97.52 E-value=7.3e-05 Score=72.47 Aligned_cols=111 Identities=15% Similarity=0.061 Sum_probs=63.8
Q ss_pred CeEEEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecCcccccCCHHHHHHHhcCCCceEEecc
Q psy4525 153 EEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRGALQVAFTIKEFREMTKLPHVQTVFRN 232 (388)
Q Consensus 153 ~~vvVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~~~~~~~~~~el~~l~~~~~~~~~~~~ 232 (388)
++|+|||||..|+.+|..|.+ .+ ..+ .+|+++.+.+...... .+..+....
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~----------------~~-~~g-~~Vtlie~~~~~~~~~---~~~~~~~g~-------- 55 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKE----------------AL-GSG-HEVTLISANDYFQFVP---SNPWVGVGW-------- 55 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHH----------------HH-GGG-SEEEEECSSSEEECGG---GHHHHHHTS--------
T ss_pred CcEEEECCcHHHHHHHHHHhc----------------cC-CCc-CEEEEEeCCCCCcccC---CccccccCc--------
Confidence 689999999999999998861 00 022 4799999987543221 111111000
Q ss_pred cccccchhhhccccchhhHHHHHHHhhCCCCCCCCCCceeEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEe
Q psy4525 233 EQLCGVHEASATLARPRKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIP 312 (388)
Q Consensus 233 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~ 312 (388)
.........+.+.+. ..|++++. ..++.+..+. + .+. +.+++++.
T Consensus 56 ----------~~~~~~~~~l~~~~~------------~~gv~~~~-~~v~~id~~~--~--~V~--------~~~g~~i~ 100 (437)
T 3sx6_A 56 ----------KERDDIAFPIRHYVE------------RKGIHFIA-QSAEQIDAEA--Q--NIT--------LADGNTVH 100 (437)
T ss_dssp ----------SCHHHHEEECHHHHH------------TTTCEEEC-SCEEEEETTT--T--EEE--------ETTSCEEE
T ss_pred ----------cCHHHHHHHHHHHHH------------HCCCEEEE-eEEEEEEcCC--C--EEE--------ECCCCEEE
Confidence 000000011112221 45788864 5777776432 2 232 34456799
Q ss_pred cceEEEccccCCccC
Q psy4525 313 SGIAFRSIGYQSRCV 327 (388)
Q Consensus 313 ~D~Vi~a~G~~p~~~ 327 (388)
+|.||+|||.+|+..
T Consensus 101 ~d~lviAtG~~~~~~ 115 (437)
T 3sx6_A 101 YDYLMIATGPKLAFE 115 (437)
T ss_dssp CSEEEECCCCEECGG
T ss_pred CCEEEECCCCCcCcc
Confidence 999999999998753
No 239
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=97.50 E-value=0.00025 Score=70.13 Aligned_cols=52 Identities=10% Similarity=0.089 Sum_probs=38.8
Q ss_pred ceeEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEecceEEEccccCCcc
Q psy4525 270 SKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPSGIAFRSIGYQSRC 326 (388)
Q Consensus 270 ~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~p~~ 326 (388)
+.|+++++++.++++..+ ++.+.++.+... .++..++.||.||.|+|.....
T Consensus 123 ~~Gv~i~~~~~V~~v~~~-~~~v~gv~~~~~----dG~~~~i~ad~VI~AdG~~S~v 174 (512)
T 3e1t_A 123 RKGVDVRERHEVIDVLFE-GERAVGVRYRNT----EGVELMAHARFIVDASGNRTRV 174 (512)
T ss_dssp HTTCEEESSCEEEEEEEE-TTEEEEEEEECS----SSCEEEEEEEEEEECCCTTCSS
T ss_pred hCCCEEEcCCEEEEEEEE-CCEEEEEEEEeC----CCCEEEEEcCEEEECCCcchHH
Confidence 468999999999999874 467766765321 2333589999999999997643
No 240
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=97.49 E-value=0.00024 Score=68.58 Aligned_cols=109 Identities=14% Similarity=0.068 Sum_probs=63.1
Q ss_pred CeEEEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecCcccccCCHHHHHHHhcCCCceEEecc
Q psy4525 153 EEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRGALQVAFTIKEFREMTKLPHVQTVFRN 232 (388)
Q Consensus 153 ~~vvVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~~~~~~~~~~el~~l~~~~~~~~~~~~ 232 (388)
++|+|||||..|+.+|..|++ + ....+|+++.+.+.+.... .+..+.... ...
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~-----------------~--~~g~~Vtlie~~~~~~~~~---~~~~~~~g~-----~~~ 55 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRN-----------------L--MPDLKITLISDRPYFGFTP---AFPHLAMGW-----RKF 55 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHH-----------------H--CTTCEEEEECSSSEEECGG---GHHHHHHTC-----SCG
T ss_pred CCEEEECccHHHHHHHHHHHc-----------------C--CCCCeEEEECCCCCCCcCC---CcchhccCc-----cCH
Confidence 689999999999999998861 0 1224799999987643221 111111000 000
Q ss_pred cccccchhhhccccchhhHHHHHHHhhCCCCCCCCCCceeEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEe
Q psy4525 233 EQLCGVHEASATLARPRKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIP 312 (388)
Q Consensus 233 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~ 312 (388)
+ .....+ .....+.|++++. ..++.+..+. + .+. +.+++++.
T Consensus 56 ~------~~~~~~-------------------~~~~~~~gv~~~~-~~v~~id~~~--~--~v~--------~~~g~~i~ 97 (430)
T 3h28_A 56 E------DISVPL-------------------APLLPKFNIEFIN-EKAESIDPDA--N--TVT--------TQSGKKIE 97 (430)
T ss_dssp G------GSEEES-------------------TTTGGGGTEEEEC-SCEEEEETTT--T--EEE--------ETTCCEEE
T ss_pred H------HHHHHH-------------------HHHHHhcCCEEEE-EEEEEEECCC--C--EEE--------ECCCcEEE
Confidence 0 000000 0012256888876 4777776432 2 222 34456799
Q ss_pred cceEEEccccCCcc
Q psy4525 313 SGIAFRSIGYQSRC 326 (388)
Q Consensus 313 ~D~Vi~a~G~~p~~ 326 (388)
+|.||+|||.+|+.
T Consensus 98 ~d~liiAtG~~~~~ 111 (430)
T 3h28_A 98 YDYLVIATGPKLVF 111 (430)
T ss_dssp CSEEEECCCCEEEC
T ss_pred CCEEEEcCCccccc
Confidence 99999999998765
No 241
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=97.49 E-value=0.0001 Score=75.70 Aligned_cols=37 Identities=19% Similarity=0.294 Sum_probs=33.8
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCC
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPF 51 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~g 51 (388)
.+||+|||||++|+++|..|++ .|.+|+|+|+.+.+|
T Consensus 264 ~~DVvIIGgGiaGlsaA~~La~--~G~~V~vlEk~~~~g 300 (689)
T 3pvc_A 264 CDDIAIIGGGIVSALTALALQR--RGAVVTLYCADAQPA 300 (689)
T ss_dssp CSSEEEECCSHHHHHHHHHHHT--TTCCEEEEESSSSTT
T ss_pred CCCEEEECCcHHHHHHHHHHHH--CCCcEEEEeCCCccc
Confidence 4799999999999999999999 899999999976554
No 242
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=97.49 E-value=6.8e-05 Score=70.71 Aligned_cols=35 Identities=20% Similarity=0.236 Sum_probs=32.5
Q ss_pred CcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCC
Q psy4525 14 PNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVP 50 (388)
Q Consensus 14 ~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~ 50 (388)
+||+|||||++|+++|..|++ .|.+|+|+|+.+..
T Consensus 3 ~dvvIIG~Gi~Gl~~A~~La~--~G~~V~vle~~~~~ 37 (372)
T 2uzz_A 3 YDLIIIGSGSVGAAAGYYATR--AGLNVLMTDAHMPP 37 (372)
T ss_dssp EEEEESCTTHHHHHHHHHHHH--TTCCEEEECSSCSS
T ss_pred CCEEEECCCHHHHHHHHHHHH--CCCeEEEEecCCCC
Confidence 689999999999999999999 89999999998654
No 243
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.49 E-value=0.00023 Score=70.28 Aligned_cols=90 Identities=17% Similarity=0.271 Sum_probs=65.9
Q ss_pred CcEEEECccHHHHHHHHHHHhhC------------CCCcEEEEcCCCCCCCceeeCCCCCCcchhHHHHHHHHhhcCCCc
Q psy4525 14 PNVCIVGSGPAGFYCAQQILKLL------------PQSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTKTGDNPRV 81 (388)
Q Consensus 14 ~~vvIIGaG~aGl~aA~~l~~~~------------~g~~v~lie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~~i 81 (388)
.+++||||||.|+.+|..|.+.. ...+|+++|..+.+. |. ..+++.+...+.+++.||
T Consensus 218 ~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il--------~~--~~~~~~~~~~~~L~~~GV 287 (502)
T 4g6h_A 218 LSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVL--------NM--FEKKLSSYAQSHLENTSI 287 (502)
T ss_dssp TEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSS--------TT--SCHHHHHHHHHHHHHTTC
T ss_pred cceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccc--------cC--CCHHHHHHHHHHHHhcce
Confidence 47999999999999999887521 246899999987652 33 245677778888889999
Q ss_pred EEEceEEEEEE----e----eeccc-----ccccCEEEEeeCCCC
Q psy4525 82 NFYGNICLGQD----I----SLGDL-----TNAYHAVVLTYGADN 113 (388)
Q Consensus 82 ~~~~~~~v~~~----~----~~~~~-----~~~yd~lvlAtG~~~ 113 (388)
++++++.+... + ...++ ...+|.||+|+|..+
T Consensus 288 ~v~~~~~v~~v~~~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv~~ 332 (502)
T 4g6h_A 288 KVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATGNKA 332 (502)
T ss_dssp EEETTEEEEEECSSEEEEEEECTTSCEEEEEEECSEEEECCCEEC
T ss_pred eeecCceEEEEeCCceEEEEEecCcccceeeeccCEEEEccCCcC
Confidence 99999887431 1 11121 136999999999765
No 244
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=97.49 E-value=0.00014 Score=67.78 Aligned_cols=44 Identities=2% Similarity=-0.120 Sum_probs=31.2
Q ss_pred ceeEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEecceEEEccccC
Q psy4525 270 SKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPSGIAFRSIGYQ 323 (388)
Q Consensus 270 ~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~ 323 (388)
+.++++++++.++++..++ +.+..+. +.++ ++.+|.||+|+|..
T Consensus 88 ~~~~~~~~~~~v~~i~~~~-~~~~~v~--------~~~g-~~~~d~vV~AtG~~ 131 (357)
T 4a9w_A 88 KYALPVLRPIRVQRVSHFG-ERLRVVA--------RDGR-QWLARAVISATGTW 131 (357)
T ss_dssp HTTCCEECSCCEEEEEEET-TEEEEEE--------TTSC-EEEEEEEEECCCSG
T ss_pred HcCCEEEcCCEEEEEEECC-CcEEEEE--------eCCC-EEEeCEEEECCCCC
Confidence 4578899999999987643 3322132 3444 79999999999964
No 245
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=97.48 E-value=8.8e-05 Score=69.98 Aligned_cols=37 Identities=19% Similarity=0.292 Sum_probs=33.2
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCC
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPF 51 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~g 51 (388)
..++|+|||||++|+++|..|++ |.+|+|+|+.+.+|
T Consensus 8 ~~~dv~IIGaGi~Gls~A~~La~---G~~V~vlE~~~~~g 44 (381)
T 3nyc_A 8 IEADYLVIGAGIAGASTGYWLSA---HGRVVVLEREAQPG 44 (381)
T ss_dssp EECSEEEECCSHHHHHHHHHHTT---TSCEEEECSSSSTT
T ss_pred CcCCEEEECCcHHHHHHHHHHhC---CCCEEEEECCCCcc
Confidence 35899999999999999999994 89999999987664
No 246
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=97.47 E-value=0.00038 Score=66.95 Aligned_cols=45 Identities=11% Similarity=-0.018 Sum_probs=33.4
Q ss_pred ceeEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEecceEEEccccCCc
Q psy4525 270 SKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPSGIAFRSIGYQSR 325 (388)
Q Consensus 270 ~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~p~ 325 (388)
+.|+++++++.++++..+++ . ..++ +.++ ++.||.||+|+|..+.
T Consensus 144 ~~Gv~i~~~~~V~~i~~~~~-~-~~V~--------~~~g-~i~ad~VIlAtG~~S~ 188 (417)
T 3v76_A 144 EAGVQLRLETSIGEVERTAS-G-FRVT--------TSAG-TVDAASLVVASGGKSI 188 (417)
T ss_dssp HHTCEEECSCCEEEEEEETT-E-EEEE--------ETTE-EEEESEEEECCCCSSC
T ss_pred HCCCEEEECCEEEEEEEeCC-E-EEEE--------ECCc-EEEeeEEEECCCCccC
Confidence 56899999999999976432 2 2232 3344 7999999999998863
No 247
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=97.47 E-value=0.00047 Score=65.37 Aligned_cols=137 Identities=9% Similarity=0.115 Sum_probs=78.4
Q ss_pred CeEEEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecCccccc------CCHHHHHHHhcCCC-
Q psy4525 153 EEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRGALQVA------FTIKEFREMTKLPH- 225 (388)
Q Consensus 153 ~~vvVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~~~~~~------~~~~el~~l~~~~~- 225 (388)
-+|+|||||.+|+-+|..|+ +.|. +|+++.|......+ .+...+.++.-.+.
T Consensus 5 ~dVvIvG~G~aGl~~A~~La--------------------~~G~-~V~l~E~~~~~g~~~~~~~~~~~~~~~~lg~~~~~ 63 (397)
T 3cgv_A 5 YDVLVVGGGPGGSTAARYAA--------------------KYGL-KTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADR 63 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHH--------------------HTTC-CEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCT
T ss_pred CCEEEECcCHHHHHHHHHHH--------------------HCCC-CEEEEeCCCCCCCCcccccccCHHHHHHcCCCCCh
Confidence 36999999999999999886 3454 69999988743221 11233333311111
Q ss_pred --ceE-----Ee-cccccccchhhhc------cccchhhHHHHHHHhhCCCCCCCCCCceeEEEEecCcceeeeeCCCCc
Q psy4525 226 --VQT-----VF-RNEQLCGVHEASA------TLARPRKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTEFKLNDNGA 291 (388)
Q Consensus 226 --~~~-----~~-~~~~~~~~~~~~~------~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~ 291 (388)
... .+ .+.....+..... ...-.+..+...+...+. +.|+++++++.++++..+ ++.
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~--------~~gv~i~~~~~v~~i~~~-~~~ 134 (397)
T 3cgv_A 64 SFIANEVKGARIYGPSEKRPIILQSEKAGNEVGYVLERDKFDKHLAALAA--------KAGADVWVKSPALGVIKE-NGK 134 (397)
T ss_dssp TTEEEEESEEEEECTTCSSCEEEC-----CCCEEEECHHHHHHHHHHHHH--------HHTCEEESSCCEEEEEEE-TTE
T ss_pred HHhhhhcceEEEEcCCCCEEEEEeccccCCceeEEEeHHHHHHHHHHHHH--------hCCCEEEECCEEEEEEEe-CCE
Confidence 000 01 1111000000000 000113344444444332 468999999999999865 466
Q ss_pred eeEEEEccCccccCCceeEEecceEEEccccCC
Q psy4525 292 ITGINFANQQALVTEDTELIPSGIAFRSIGYQS 324 (388)
Q Consensus 292 v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~p 324 (388)
+.++.+.+ .+++.++.||.||.|+|...
T Consensus 135 v~gv~~~~-----~~~~~~~~a~~vV~A~G~~s 162 (397)
T 3cgv_A 135 VAGAKIRH-----NNEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp EEEEEEEE-----TTEEEEEEEEEEEECCCTTC
T ss_pred EEEEEEEE-----CCeEEEEEcCEEEECCCcch
Confidence 76666532 35677899999999999876
No 248
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=97.47 E-value=0.00024 Score=65.72 Aligned_cols=86 Identities=12% Similarity=0.099 Sum_probs=60.4
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCCCCCCcchhHHHHHHHHhhcCCCcEEEceEEEEE
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTKTGDNPRVNFYGNICLGQ 91 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 91 (388)
..++++|||+|+.|+.+|..|.+ .+.+|+++++.+.+. + ...+.. ...+..|++++.++.+..
T Consensus 172 ~~~~v~vvG~G~~g~e~a~~l~~--~g~~v~~v~~~~~~~--------~----~~~~~~---~l~~~~gv~i~~~~~v~~ 234 (338)
T 3itj_A 172 RNKPLAVIGGGDSACEEAQFLTK--YGSKVFMLVRKDHLR--------A----STIMQK---RAEKNEKIEILYNTVALE 234 (338)
T ss_dssp TTSEEEEECSSHHHHHHHHHHTT--TSSEEEEECSSSSCC--------S----CHHHHH---HHHHCTTEEEECSEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHh--cCCEEEEEEcCCccC--------C----CHHHHH---HHHhcCCeEEeecceeEE
Confidence 45799999999999999999999 899999999886542 1 112222 222345899998876532
Q ss_pred E---------eeecc------cccccCEEEEeeCCCCC
Q psy4525 92 D---------ISLGD------LTNAYHAVVLTYGADND 114 (388)
Q Consensus 92 ~---------~~~~~------~~~~yd~lvlAtG~~~~ 114 (388)
. +...+ ....+|.||+|+|..+.
T Consensus 235 i~~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~ 272 (338)
T 3itj_A 235 AKGDGKLLNALRIKNTKKNEETDLPVSGLFYAIGHTPA 272 (338)
T ss_dssp EEESSSSEEEEEEEETTTTEEEEEECSEEEECSCEEEC
T ss_pred EEcccCcEEEEEEEECCCCceEEEEeCEEEEEeCCCCC
Confidence 1 33322 12379999999997663
No 249
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=97.42 E-value=0.00011 Score=71.77 Aligned_cols=42 Identities=14% Similarity=0.119 Sum_probs=38.6
Q ss_pred CCCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCce
Q psy4525 11 QLKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLV 54 (388)
Q Consensus 11 ~~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~ 54 (388)
...+||+|||+|.+|+++|..|++ .|.+|+++|+++.+||.+
T Consensus 18 ~~~~dv~iiG~G~~g~~~a~~l~~--~g~~v~~~e~~~~~Gg~~ 59 (475)
T 3p1w_A 18 GEHYDVIILGTGLKECILSGLLSH--YGKKILVLDRNPYYGGET 59 (475)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSSCGGG
T ss_pred cccCCEEEECCCHHHHHHHHHHHH--CCCcEEEEeccCCCCCCc
Confidence 345799999999999999999999 899999999999999875
No 250
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=97.42 E-value=0.00052 Score=65.75 Aligned_cols=49 Identities=14% Similarity=0.154 Sum_probs=34.7
Q ss_pred ceeEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEecceEEEccccCC
Q psy4525 270 SKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPSGIAFRSIGYQS 324 (388)
Q Consensus 270 ~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~p 324 (388)
+.|+++++++.++++..++++.+..+... .++..++.||.||.|+|..+
T Consensus 118 ~~gv~i~~~~~v~~i~~~~~~~~v~v~~~------~g~~~~~~a~~vV~A~G~~s 166 (421)
T 3nix_A 118 RQGVDVEYEVGVTDIKFFGTDSVTTIEDI------NGNKREIEARFIIDASGYGR 166 (421)
T ss_dssp HHTCEEECSEEEEEEEEETTEEEEEEEET------TSCEEEEEEEEEEECCGGGC
T ss_pred hCCCEEEcCCEEEEEEEeCCEEEEEEEcC------CCCEEEEEcCEEEECCCCch
Confidence 46899999999999986544433333321 23333799999999999875
No 251
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.40 E-value=0.00052 Score=63.48 Aligned_cols=86 Identities=14% Similarity=0.150 Sum_probs=60.7
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCCCCCCcchhHHHHHHHHhhcCCCcEEEceEEEEE
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTKTGDNPRVNFYGNICLGQ 91 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 91 (388)
..++|+|||+|+.|+.+|..|.+ .+.+|+++++.+.+. + ...+. .+.+++.+++++.++.+..
T Consensus 158 ~~~~v~VvG~G~~g~e~A~~l~~--~g~~V~lv~~~~~~~--------~----~~~~~---~~~~~~~gv~i~~~~~v~~ 220 (333)
T 1vdc_A 158 RNKPLAVIGGGDSAMEEANFLTK--YGSKVYIIHRRDAFR--------A----SKIMQ---QRALSNPKIDVIWNSSVVE 220 (333)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTT--TSSEEEEECSSSSCC--------S----CHHHH---HHHHTCTTEEEECSEEEEE
T ss_pred CCCeEEEECCChHHHHHHHHHHh--cCCeEEEEecCCcCC--------c----cHHHH---HHHHhCCCeeEecCCceEE
Confidence 45799999999999999999998 799999999886531 1 11111 2345678999988766532
Q ss_pred E-----------eeec---cc---ccccCEEEEeeCCCCC
Q psy4525 92 D-----------ISLG---DL---TNAYHAVVLTYGADND 114 (388)
Q Consensus 92 ~-----------~~~~---~~---~~~yd~lvlAtG~~~~ 114 (388)
. +... +. ...+|.||+|+|..+.
T Consensus 221 i~~~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~ 260 (333)
T 1vdc_A 221 AYGDGERDVLGGLKVKNVVTGDVSDLKVSGLFFAIGHEPA 260 (333)
T ss_dssp EEESSSSSSEEEEEEEETTTCCEEEEECSEEEECSCEEES
T ss_pred EeCCCCccceeeEEEEecCCCceEEEecCEEEEEeCCccc
Confidence 1 2222 11 2379999999997763
No 252
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.40 E-value=0.00047 Score=69.56 Aligned_cols=90 Identities=11% Similarity=0.164 Sum_probs=62.8
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCCCCCCcchhHHHHHHHHhhcCCCcEEEceEEEEE
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTKTGDNPRVNFYGNICLGQ 91 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 91 (388)
.+++++|||||+.|+.+|..|++ .|.+|+++++. .+. |. ...++...+.+.+++.|++++.++.+..
T Consensus 285 ~~~~vvViGgG~~g~E~A~~l~~--~g~~Vtlv~~~-~~l--------~~--~d~~~~~~~~~~l~~~gv~i~~~~~v~~ 351 (598)
T 2x8g_A 285 FPGKTLVIGASYVALECAGFLAS--LGGDVTVMVRS-ILL--------RG--FDQQMAEKVGDYMENHGVKFAKLCVPDE 351 (598)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHH--TTCCEEEEESS-CSS--------TT--SCHHHHHHHHHHHHHTTCEEEETEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHH--cCCEEEEEECC-cCc--------Cc--CCHHHHHHHHHHHHhCCCEEEECCeEEE
Confidence 45789999999999999999999 89999999986 221 22 1234555666677778999987753311
Q ss_pred E-----------------ee--ecccc-c--ccCEEEEeeCCCCC
Q psy4525 92 D-----------------IS--LGDLT-N--AYHAVVLTYGADND 114 (388)
Q Consensus 92 ~-----------------~~--~~~~~-~--~yd~lvlAtG~~~~ 114 (388)
. +. ..+.+ . .+|.||+|+|..|.
T Consensus 352 v~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~D~vi~a~G~~p~ 396 (598)
T 2x8g_A 352 IKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETVIFAVGREPQ 396 (598)
T ss_dssp EEEEECCBTTTTBCCEEEEEEEETTSCEEEEEESEEEECSCEEEC
T ss_pred EEeccccccccCCCceEEEEEEeCCCcEEeccCCEEEEEeCCccc
Confidence 0 11 11222 2 38999999997663
No 253
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=97.39 E-value=0.0012 Score=62.97 Aligned_cols=133 Identities=9% Similarity=0.007 Sum_probs=73.1
Q ss_pred CCeEEEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecCccccc------CCHHHHHHHhcCC-
Q psy4525 152 CEEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRGALQVA------FTIKEFREMTKLP- 224 (388)
Q Consensus 152 ~~~vvVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~~~~~~------~~~~el~~l~~~~- 224 (388)
..+|+|||||.+|+-+|..|+ +.| .+|+++.|.+..... +.+.-++.+..+-
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~--------------------~~G-~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~ 63 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLR--------------------DAG-VDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGV 63 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHH--------------------HTT-CEEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTC
T ss_pred CCcEEEECCCHHHHHHHHHHH--------------------hCC-CCEEEEecCCCCCCccccccccChhHHHHHHHcCC
Confidence 468999999999999999886 345 369999988653111 2333232222211
Q ss_pred --------CceEEeccc-ccccchhhhc-cccchhhHHHHHHHhhCCCCCCCCCCceeEEEEecCcceeeeeCCCCceeE
Q psy4525 225 --------HVQTVFRNE-QLCGVHEASA-TLARPRKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTEFKLNDNGAITG 294 (388)
Q Consensus 225 --------~~~~~~~~~-~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~v~~ 294 (388)
.....+... .-..+..... .....+..+...+.... .++++++++.++++..+++ .+ .
T Consensus 64 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~L~~~~----------~~~~i~~~~~v~~i~~~~~-~v-~ 131 (397)
T 2vou_A 64 ELDSISVPSSSMEYVDALTGERVGSVPADWRFTSYDSIYGGLYELF----------GPERYHTSKCLVGLSQDSE-TV-Q 131 (397)
T ss_dssp CGGGTCBCCCEEEEEETTTCCEEEEEECCCCEEEHHHHHHHHHHHH----------CSTTEETTCCEEEEEECSS-CE-E
T ss_pred ccccccccccceEEEecCCCCccccccCcccccCHHHHHHHHHHhC----------CCcEEEcCCEEEEEEecCC-EE-E
Confidence 001111100 0000000000 00011234445554332 3678899999999986543 33 2
Q ss_pred EEEccCccccCCceeEEecceEEEccccCCc
Q psy4525 295 INFANQQALVTEDTELIPSGIAFRSIGYQSR 325 (388)
Q Consensus 295 v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~p~ 325 (388)
+.+ .+++++.+|.||.|.|....
T Consensus 132 v~~--------~~g~~~~ad~vV~AdG~~S~ 154 (397)
T 2vou_A 132 MRF--------SDGTKAEANWVIGADGGASV 154 (397)
T ss_dssp EEE--------TTSCEEEESEEEECCCTTCH
T ss_pred EEE--------CCCCEEECCEEEECCCcchh
Confidence 433 33457999999999998754
No 254
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=97.39 E-value=0.00013 Score=72.99 Aligned_cols=36 Identities=25% Similarity=0.339 Sum_probs=33.0
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCC
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVP 50 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~ 50 (388)
.++|+||||||+|+++|..|++ .|.+|+|||+.+.+
T Consensus 26 ~~dVlIVGaGpaGl~~A~~La~--~G~~V~vlEr~~~~ 61 (549)
T 2r0c_A 26 ETDVLILGGGPVGMALALDLAH--RQVGHLVVEQTDGT 61 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSCSC
T ss_pred CCCEEEECcCHHHHHHHHHHHH--CCCCEEEEeCCCCC
Confidence 3689999999999999999999 89999999998654
No 255
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.37 E-value=0.00082 Score=66.92 Aligned_cols=45 Identities=11% Similarity=0.079 Sum_probs=31.5
Q ss_pred EEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEecceEEEcccc--CCcc
Q psy4525 274 RPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPSGIAFRSIGY--QSRC 326 (388)
Q Consensus 274 ~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~--~p~~ 326 (388)
.+++++.++++..++++..-.+.+ .+++++.||.||+|+|. +|..
T Consensus 105 ~i~~~~~V~~i~~~~~~~~~~V~~--------~~G~~i~ad~lV~AtG~~s~p~~ 151 (540)
T 3gwf_A 105 HFKFGTEVTSALYLDDENLWEVTT--------DHGEVYRAKYVVNAVGLLSAINF 151 (540)
T ss_dssp GEEESCCEEEEEEETTTTEEEEEE--------TTSCEEEEEEEEECCCSCCSBCC
T ss_pred eeEeccEEEEEEEeCCCCEEEEEE--------cCCCEEEeCEEEECCcccccCCC
Confidence 677888898887655433334433 44568999999999995 5543
No 256
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.36 E-value=0.00051 Score=63.75 Aligned_cols=86 Identities=13% Similarity=0.197 Sum_probs=60.5
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCCCCCCcchhHHHHHHHHhhcCCCcEEEceEEEEE
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTKTGDNPRVNFYGNICLGQ 91 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 91 (388)
..++|+|||+|+.|+.+|..|.+ .+.+|+++++.+.+. +. +.+. .+.+++.+++++.++.+..
T Consensus 154 ~~~~v~ViG~G~~g~e~a~~l~~--~g~~V~l~~~~~~~~--------~~----~~~~---~~~~~~~gV~v~~~~~v~~ 216 (335)
T 2a87_A 154 RDQDIAVIGGGDSAMEEATFLTR--FARSVTLVHRRDEFR--------AS----KIML---DRARNNDKIRFLTNHTVVA 216 (335)
T ss_dssp TTCEEEEECSSHHHHHHHHHHTT--TCSEEEEECSSSSCS--------SC----TTHH---HHHHHCTTEEEECSEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHH--hCCeEEEEEcCCcCC--------cc----HHHH---HHHhccCCcEEEeCceeEE
Confidence 45899999999999999999999 799999999886541 11 1122 1234567999998876532
Q ss_pred E--------eeec---cc---ccccCEEEEeeCCCCC
Q psy4525 92 D--------ISLG---DL---TNAYHAVVLTYGADND 114 (388)
Q Consensus 92 ~--------~~~~---~~---~~~yd~lvlAtG~~~~ 114 (388)
. +.+. +. ...+|.||+|+|..+.
T Consensus 217 i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~ 253 (335)
T 2a87_A 217 VDGDTTVTGLRVRDTNTGAETTLPVTGVFVAIGHEPR 253 (335)
T ss_dssp EECSSSCCEEEEEEETTSCCEEECCSCEEECSCEEEC
T ss_pred EecCCcEeEEEEEEcCCCceEEeecCEEEEccCCccC
Confidence 1 2222 12 2379999999997763
No 257
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=97.36 E-value=0.0012 Score=62.77 Aligned_cols=61 Identities=11% Similarity=0.202 Sum_probs=42.1
Q ss_pred hhHHHHHHHhhCCCCCCCCCCce-eEEEEecCcceeeeeCCCCcee-EEEEccCccccCCceeEEecceEEEccccCCcc
Q psy4525 249 RKRLTELILKTSNPDESKSNCSK-YFRPIFLRSPTEFKLNDNGAIT-GINFANQQALVTEDTELIPSGIAFRSIGYQSRC 326 (388)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~-gv~~~~~~~~~~i~~~~~~~v~-~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~p~~ 326 (388)
+..+...+...+. +. |+++++++.++++..++ +.+. .+++ .+++++.+|.||.|+|..+..
T Consensus 106 r~~l~~~L~~~~~--------~~~gv~i~~~~~v~~i~~~~-~~v~g~v~~--------~~g~~~~ad~vV~AdG~~s~v 168 (399)
T 2x3n_A 106 CESLRRLVLEKID--------GEATVEMLFETRIEAVQRDE-RHAIDQVRL--------NDGRVLRPRVVVGADGIASYV 168 (399)
T ss_dssp HHHHHHHHHHHHT--------TCTTEEEECSCCEEEEEECT-TSCEEEEEE--------TTSCEEEEEEEEECCCTTCHH
T ss_pred HHHHHHHHHHHhh--------hcCCcEEEcCCEEEEEEEcC-CceEEEEEE--------CCCCEEECCEEEECCCCChHH
Confidence 4455555655442 34 89999999999998754 3332 4443 234579999999999987653
No 258
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=97.36 E-value=0.00073 Score=61.79 Aligned_cols=86 Identities=12% Similarity=0.118 Sum_probs=59.8
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCCCCCCcchhHHHHHHHHhhcCCCcEEEceEEEEE
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTKTGDNPRVNFYGNICLGQ 91 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 91 (388)
..++|+|||+|+.|+.+|..|.+ .+.+|+++++.+.+. ....+.+ ...++.+++++.++.+..
T Consensus 142 ~~~~v~VvG~G~~g~e~A~~l~~--~g~~Vtlv~~~~~~~------------~~~~~~~---~l~~~~gv~v~~~~~v~~ 204 (311)
T 2q0l_A 142 KNKEVAVLGGGDTAVEEAIYLAN--ICKKVYLIHRRDGFR------------CAPITLE---HAKNNDKIEFLTPYVVEE 204 (311)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHT--TSSEEEEECSSSSCC------------SCHHHHH---HHHTCTTEEEETTEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHh--cCCEEEEEeeCCccC------------CCHHHHH---HHhhCCCeEEEeCCEEEE
Confidence 45899999999999999999999 799999999875531 1112222 223357899987765521
Q ss_pred ---------Eeeec---cc---ccccCEEEEeeCCCCC
Q psy4525 92 ---------DISLG---DL---TNAYHAVVLTYGADND 114 (388)
Q Consensus 92 ---------~~~~~---~~---~~~yd~lvlAtG~~~~ 114 (388)
.+... +. ...+|.||+|+|..|.
T Consensus 205 i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~ 242 (311)
T 2q0l_A 205 IKGDASGVSSLSIKNTATNEKRELVVPGFFIFVGYDVN 242 (311)
T ss_dssp EEEETTEEEEEEEEETTTCCEEEEECSEEEECSCEEEC
T ss_pred EECCCCcEeEEEEEecCCCceEEEecCEEEEEecCccC
Confidence 12322 22 2379999999997663
No 259
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=97.35 E-value=0.00082 Score=65.30 Aligned_cols=141 Identities=13% Similarity=0.158 Sum_probs=77.6
Q ss_pred CeEEEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecCccccc-------CCHHHHHHHhcCCC
Q psy4525 153 EEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRGALQVA-------FTIKEFREMTKLPH 225 (388)
Q Consensus 153 ~~vvVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~~~~~~-------~~~~el~~l~~~~~ 225 (388)
-+|+|||||.+|+-+|..|+ +.|. +|+++.+.+..... .....+.++.-...
T Consensus 7 ~dVvIVGaG~aGl~aA~~La--------------------~~G~-~V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~~ 65 (453)
T 3atr_A 7 YDVLIIGGGFAGSSAAYQLS--------------------RRGL-KILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYP 65 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHS--------------------SSSC-CEEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCCC
T ss_pred CCEEEECcCHHHHHHHHHHH--------------------HCCC-CEEEEECCCCCCCCcccccccccHHHHHHhcCCCC
Confidence 46999999999999999887 3444 69999987643210 12233433321110
Q ss_pred ----ce-----E-EecccccccchhhhccccchhhHHHHHHHhhCCCCCCCCCCceeEEEEecCcceeeeeCCCCceeEE
Q psy4525 226 ----VQ-----T-VFRNEQLCGVHEASATLARPRKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTEFKLNDNGAITGI 295 (388)
Q Consensus 226 ----~~-----~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~v~~v 295 (388)
.. . .+.+.....+........-.+..+...+...+. +.|+++++++.++++..+ ++.+.++
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~a~--------~~gv~i~~~~~v~~i~~~-~~~v~gv 136 (453)
T 3atr_A 66 KGEELENKINGIKLYSPDMQTVWTVNGEGFELNAPLYNQRVLKEAQ--------DRGVEIWDLTTAMKPIFE-DGYVKGA 136 (453)
T ss_dssp CGGGEEEEEEEEEEECTTSSCEEEEEEEEEEECHHHHHHHHHHHHH--------HTTCEEESSEEEEEEEEE-TTEEEEE
T ss_pred chHHHHhhhcceEEECCCCceEEeECCCcEEEcHHHHHHHHHHHHH--------HcCCEEEeCcEEEEEEEE-CCEEEEE
Confidence 00 0 111110000000000011113344444444331 468999999999998764 4566666
Q ss_pred EEccCccccCCceeEEecceEEEccccCCcc
Q psy4525 296 NFANQQALVTEDTELIPSGIAFRSIGYQSRC 326 (388)
Q Consensus 296 ~~~~~~~~~~~~~~~l~~D~Vi~a~G~~p~~ 326 (388)
.+.+.. .++..++.||.||.|+|..+..
T Consensus 137 ~~~~~~---~G~~~~~~ad~VV~AdG~~s~v 164 (453)
T 3atr_A 137 VLFNRR---TNEELTVYSKVVVEATGYSRSF 164 (453)
T ss_dssp EEEETT---TTEEEEEECSEEEECCGGGCTT
T ss_pred EEEEcC---CCceEEEEcCEEEECcCCchhh
Confidence 553210 2233489999999999987654
No 260
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.35 E-value=0.00022 Score=67.35 Aligned_cols=33 Identities=33% Similarity=0.481 Sum_probs=31.4
Q ss_pred CcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCC
Q psy4525 14 PNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLP 48 (388)
Q Consensus 14 ~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~ 48 (388)
++|+|||||+||+.+|..+++ .|.+|+|+|+.+
T Consensus 2 ~dViVIGgG~AG~~AA~~la~--~G~~V~liE~~~ 34 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLR--LGVPVRLFEMRP 34 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHH--TTCCEEEECCTT
T ss_pred CCEEEECchHHHHHHHHHHHH--CCCcEEEEeccC
Confidence 689999999999999999999 899999999876
No 261
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.35 E-value=0.00073 Score=62.29 Aligned_cols=86 Identities=16% Similarity=0.166 Sum_probs=60.1
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCCCCCCcchhHHHHHHHHhhcCCCcEEEceEEEEE
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTKTGDNPRVNFYGNICLGQ 91 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 91 (388)
..++|+|||+|+.|+.+|..|.+ .+.+|+++++.+.+. + ...+. .+..++.+++++.++.+..
T Consensus 151 ~~~~v~VvG~G~~g~e~A~~l~~--~g~~Vtlv~~~~~~~--------~----~~~~~---~~l~~~~gv~i~~~~~v~~ 213 (325)
T 2q7v_A 151 KGKKVVVIGGGDAAVEEGMFLTK--FADEVTVIHRRDTLR--------A----NKVAQ---ARAFANPKMKFIWDTAVEE 213 (325)
T ss_dssp TTCEEEEECCSHHHHHHHHHHTT--TCSEEEEECSSSSCC--------S----CHHHH---HHHHTCTTEEEECSEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHh--cCCEEEEEeCCCcCC--------c----chHHH---HHHHhcCCceEecCCceEE
Confidence 35799999999999999999999 799999999875431 1 11222 2233456899988776532
Q ss_pred --------Eeeec---cc---ccccCEEEEeeCCCCC
Q psy4525 92 --------DISLG---DL---TNAYHAVVLTYGADND 114 (388)
Q Consensus 92 --------~~~~~---~~---~~~yd~lvlAtG~~~~ 114 (388)
.+... ++ ...+|.||+|+|..+.
T Consensus 214 i~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~ 250 (325)
T 2q7v_A 214 IQGADSVSGVKLRNLKTGEVSELATDGVFIFIGHVPN 250 (325)
T ss_dssp EEESSSEEEEEEEETTTCCEEEEECSEEEECSCEEES
T ss_pred EccCCcEEEEEEEECCCCcEEEEEcCEEEEccCCCCC
Confidence 12222 22 2379999999997663
No 262
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.34 E-value=0.00044 Score=67.55 Aligned_cols=89 Identities=21% Similarity=0.203 Sum_probs=61.0
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCCCCCCcchhHHHHHHHHhhcCCCcEEEceEEEEE
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTKTGDNPRVNFYGNICLGQ 91 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 91 (388)
.+++++|||+|+.|+.+|..|++ .|.+|+++++.+.+. |.. ...++...+.+.++ ++++.++.+..
T Consensus 171 ~~~~vvViGgG~~g~e~A~~l~~--~g~~Vtlv~~~~~~l--------~~~-~d~~~~~~l~~~l~---v~i~~~~~v~~ 236 (466)
T 3l8k_A 171 LPQDMVIIGAGYIGLEIASIFRL--MGVQTHIIEMLDRAL--------ITL-EDQDIVNTLLSILK---LNIKFNSPVTE 236 (466)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSSC--------TTS-CCHHHHHHHHHHHC---CCEECSCCEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHH--cCCEEEEEEeCCcCC--------CCC-CCHHHHHHHHhcCE---EEEEECCEEEE
Confidence 45899999999999999999999 899999999986542 211 13345555555554 66665544321
Q ss_pred ---------Eeeec--cc---ccccCEEEEeeCCCCC
Q psy4525 92 ---------DISLG--DL---TNAYHAVVLTYGADND 114 (388)
Q Consensus 92 ---------~~~~~--~~---~~~yd~lvlAtG~~~~ 114 (388)
.+... ++ ...+|.||+|+|..|.
T Consensus 237 i~~~~~~~v~v~~~~~~G~~~~i~~D~vi~a~G~~p~ 273 (466)
T 3l8k_A 237 VKKIKDDEYEVIYSTKDGSKKSIFTNSVVLAAGRRPV 273 (466)
T ss_dssp EEEEETTEEEEEECCTTSCCEEEEESCEEECCCEEEC
T ss_pred EEEcCCCcEEEEEEecCCceEEEEcCEEEECcCCCcc
Confidence 12333 22 2378999999997764
No 263
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=97.34 E-value=0.00018 Score=72.11 Aligned_cols=40 Identities=15% Similarity=0.116 Sum_probs=35.5
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCc
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGL 53 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~ 53 (388)
..+||+|||||++|+++|..|++ .|.+|+|+|+.+..+|.
T Consensus 17 ~~~DVvVIGgGi~Gl~~A~~La~--~G~~V~LlEk~d~~~Gt 56 (561)
T 3da1_A 17 KQLDLLVIGGGITGAGIALDAQV--RGIQTGLVEMNDFASGT 56 (561)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHT--TTCCEEEEESSSTTCSG
T ss_pred CCCCEEEECCCHHHHHHHHHHHh--CCCcEEEEECCCCCCCc
Confidence 46899999999999999999999 89999999998655543
No 264
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=97.33 E-value=0.00016 Score=73.35 Aligned_cols=54 Identities=11% Similarity=0.072 Sum_probs=43.2
Q ss_pred ceeEEEEecCcceeeeeCCC-CceeEEEEccCccccCCceeEEecceEEEccccCCcc
Q psy4525 270 SKYFRPIFLRSPTEFKLNDN-GAITGINFANQQALVTEDTELIPSGIAFRSIGYQSRC 326 (388)
Q Consensus 270 ~~gv~~~~~~~~~~i~~~~~-~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~p~~ 326 (388)
+.++++++++.++++..+++ +++.++++.+. ..++..++.||.||+|+|..+++
T Consensus 272 ~~nv~v~~~~~V~~i~~~~~~~~v~GV~~~~~---~~g~~~~i~A~~VIlaaG~~~s~ 326 (623)
T 3pl8_A 272 EERFNLFPAVACERVVRNALNSEIESLHIHDL---ISGDRFEIKADVYVLTAGAVHNT 326 (623)
T ss_dssp EEEEEEECSEEEEEEEECTTSSCEEEEEEEET---TTCCEEEECEEEEEECSCTTHHH
T ss_pred CCCEEEEeCCEEEEEEEECCCCEEEEEEEEEc---CCCcEEEEECCEEEEcCCCcCCH
Confidence 46999999999999987543 48888887542 13555689999999999999886
No 265
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=97.33 E-value=0.00066 Score=64.24 Aligned_cols=44 Identities=9% Similarity=0.076 Sum_probs=33.1
Q ss_pred ceeEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEecceEEEccccCCcc
Q psy4525 270 SKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPSGIAFRSIGYQSRC 326 (388)
Q Consensus 270 ~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~p~~ 326 (388)
+.|+++++++.++++.. ++ .+++ .+++++.+|.||.|+|..+..
T Consensus 119 ~~gv~i~~~~~v~~i~~--~~---~v~~--------~~g~~~~ad~vV~AdG~~s~v 162 (379)
T 3alj_A 119 ALGVDISVNSEAVAADP--VG---RLTL--------QTGEVLEADLIVGADGVGSKV 162 (379)
T ss_dssp HTTCEEESSCCEEEEET--TT---EEEE--------TTSCEEECSEEEECCCTTCHH
T ss_pred hcCCEEEeCCEEEEEEe--CC---EEEE--------CCCCEEEcCEEEECCCccHHH
Confidence 45899999999999975 23 3433 334579999999999988653
No 266
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=97.33 E-value=0.0002 Score=70.73 Aligned_cols=36 Identities=17% Similarity=0.195 Sum_probs=32.9
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCC
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVP 50 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~ 50 (388)
.+||+|||||++|+++|..|++ .|.+|+|+|+.+..
T Consensus 3 ~~DVvIIGgGi~G~~~A~~La~--~G~~V~llE~~~~~ 38 (501)
T 2qcu_A 3 TKDLIVIGGGINGAGIAADAAG--RGLSVLMLEAQDLA 38 (501)
T ss_dssp CBSEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSTT
T ss_pred cCCEEEECcCHHHHHHHHHHHh--CCCCEEEEECCCCC
Confidence 4799999999999999999999 89999999997643
No 267
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=97.32 E-value=0.00077 Score=61.54 Aligned_cols=86 Identities=10% Similarity=0.109 Sum_probs=61.3
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCCCCCCcchhHHHHHHHHhhcCCCcEEEceEEEEE
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTKTGDNPRVNFYGNICLGQ 91 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 91 (388)
..++++|||+|+.|+.+|..|.+ .+.+|+++++.+.+. ...++ ..+.+++.|++++.++.+..
T Consensus 146 ~~~~v~viG~g~~~~e~a~~l~~--~g~~v~~~~~~~~~~------------~~~~~---~~~~~~~~gv~~~~~~~v~~ 208 (315)
T 3r9u_A 146 KNKEVAVLGGGDTALEEALYLAN--ICSKIYLIHRRDEFR------------AAPST---VEKVKKNEKIELITSASVDE 208 (315)
T ss_dssp TTSEEEEECCBHHHHHHHHHHHT--TSSEEEEECSSSSCB------------SCHHH---HHHHHHCTTEEEECSCEEEE
T ss_pred CcCEEEEECCCHHHHHHHHHHHh--hCCEEEEEEeCCCCC------------CCHHH---HHHHHhcCCeEEEeCcEEEE
Confidence 45799999999999999999999 799999999885531 11122 23334578999997766532
Q ss_pred E---------eeec--cc---ccccCEEEEeeCCCCC
Q psy4525 92 D---------ISLG--DL---TNAYHAVVLTYGADND 114 (388)
Q Consensus 92 ~---------~~~~--~~---~~~yd~lvlAtG~~~~ 114 (388)
. +.+. ++ ...+|.||+|+|..|.
T Consensus 209 i~~~~~~~~~v~~~~~~g~~~~~~~D~vv~a~G~~p~ 245 (315)
T 3r9u_A 209 VYGDKMGVAGVKVKLKDGSIRDLNVPGIFTFVGLNVR 245 (315)
T ss_dssp EEEETTEEEEEEEECTTSCEEEECCSCEEECSCEEEC
T ss_pred EEcCCCcEEEEEEEcCCCCeEEeecCeEEEEEcCCCC
Confidence 1 2222 33 2379999999997663
No 268
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=97.32 E-value=0.00014 Score=72.22 Aligned_cols=37 Identities=27% Similarity=0.420 Sum_probs=32.4
Q ss_pred CCcEEEECccHHHHHHHHHHHhhC----------CCCcEEEEcCCCC
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLL----------PQSTVDIYEKLPV 49 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~----------~g~~v~lie~~~~ 49 (388)
.++|+|||||+||+.+|..|++.. .|++|+|+|+.+.
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~~ 53 (526)
T 2pyx_A 7 ITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPDV 53 (526)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCCC
Confidence 479999999999999999999832 6899999998754
No 269
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=97.32 E-value=0.00055 Score=66.82 Aligned_cols=54 Identities=9% Similarity=0.040 Sum_probs=32.9
Q ss_pred eeEE--EEecCcceeeeeCCCCceeEEEEccCccccCCceeEEecceEEEccc--cCCccC
Q psy4525 271 KYFR--PIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPSGIAFRSIG--YQSRCV 327 (388)
Q Consensus 271 ~gv~--~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G--~~p~~~ 327 (388)
.++. +++++.++.+...+++..-.+.+.++ ..+...++.+|.||+||| ..|+.+
T Consensus 114 ~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~---~~g~~~~~~~d~VVvAtG~~s~p~~p 171 (464)
T 2xve_A 114 AGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDH---TTDTIYSEEFDYVVCCTGHFSTPYVP 171 (464)
T ss_dssp HTCGGGEECSEEEEEEEEETTTTEEEEEEEET---TTTEEEEEEESEEEECCCSSSSBCCC
T ss_pred cCCcceEEeCCEEEEEEEcCCCCcEEEEEEEc---CCCceEEEEcCEEEECCCCCCCCccC
Confidence 3555 77788888887643321223333221 023336789999999999 566543
No 270
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=97.31 E-value=0.001 Score=60.83 Aligned_cols=23 Identities=17% Similarity=0.122 Sum_probs=19.2
Q ss_pred CCceeEEecceEEEccccCCccC
Q psy4525 305 TEDTELIPSGIAFRSIGYQSRCV 327 (388)
Q Consensus 305 ~~~~~~l~~D~Vi~a~G~~p~~~ 327 (388)
+.+++++.+|.||+|||.+|..+
T Consensus 98 ~~~g~~~~a~~liiATGs~p~~p 120 (304)
T 4fk1_A 98 TKDHTKYLAERVLLATGMQEEFP 120 (304)
T ss_dssp ETTCCEEEEEEEEECCCCEEECC
T ss_pred ECCCCEEEeCEEEEccCCccccc
Confidence 45667899999999999988654
No 271
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.31 E-value=0.00073 Score=61.77 Aligned_cols=84 Identities=14% Similarity=0.125 Sum_probs=59.1
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCCCCCCcchhHHHHHHHHhhcC-CCcEEEceEEEE
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTKTGDN-PRVNFYGNICLG 90 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~-~~i~~~~~~~v~ 90 (388)
..++|+|||+|+.|+.+|..|.+ .+.+|+++++.+.+. ... .+.+.+.+ .+++++.++.+.
T Consensus 143 ~~~~v~VvG~G~~g~e~A~~l~~--~g~~Vtlv~~~~~~~------------~~~----~~~~~l~~~~gv~v~~~~~v~ 204 (310)
T 1fl2_A 143 KGKRVAVIGGGNSGVEAAIDLAG--IVEHVTLLEFAPEMK------------ADQ----VLQDKLRSLKNVDIILNAQTT 204 (310)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHT--TBSEEEEECSSSSCC------------SCH----HHHHHHHTCTTEEEESSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHH--hCCEEEEEEeCcccC------------ccH----HHHHHHhhCCCeEEecCCceE
Confidence 35799999999999999999999 799999999886541 011 12233444 689998876653
Q ss_pred E---------Eeeecc---c---ccccCEEEEeeCCCC
Q psy4525 91 Q---------DISLGD---L---TNAYHAVVLTYGADN 113 (388)
Q Consensus 91 ~---------~~~~~~---~---~~~yd~lvlAtG~~~ 113 (388)
. .+...+ . ...+|.||+|+|..|
T Consensus 205 ~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p 242 (310)
T 1fl2_A 205 EVKGDGSKVVGLEYRDRVSGDIHNIELAGIFVQIGLLP 242 (310)
T ss_dssp EEEESSSSEEEEEEEETTTCCEEEEECSEEEECSCEEE
T ss_pred EEEcCCCcEEEEEEEECCCCcEEEEEcCEEEEeeCCcc
Confidence 2 122221 2 237899999999766
No 272
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=97.31 E-value=0.00053 Score=68.45 Aligned_cols=45 Identities=13% Similarity=0.133 Sum_probs=31.1
Q ss_pred EEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEecceEEEccc--cCCcc
Q psy4525 274 RPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPSGIAFRSIG--YQSRC 326 (388)
Q Consensus 274 ~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G--~~p~~ 326 (388)
.+++++.++++..+++...-.++ +.+++++.||.||+|+| .+|..
T Consensus 117 ~i~~~~~V~~i~~~~~~~~w~V~--------~~~G~~i~ad~lV~AtG~~s~p~~ 163 (549)
T 4ap3_A 117 DIRFDTRVTSAVLDEEGLRWTVR--------TDRGDEVSARFLVVAAGPLSNANT 163 (549)
T ss_dssp GEECSCCEEEEEEETTTTEEEEE--------ETTCCEEEEEEEEECCCSEEECCC
T ss_pred cEEECCEEEEEEEcCCCCEEEEE--------ECCCCEEEeCEEEECcCCCCCCCC
Confidence 67778888888765443333443 34556799999999999 45544
No 273
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=97.30 E-value=0.00023 Score=71.18 Aligned_cols=38 Identities=24% Similarity=0.384 Sum_probs=33.5
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhC-CCCcEEEEcCCCC
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLL-PQSTVDIYEKLPV 49 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~-~g~~v~lie~~~~ 49 (388)
..++|+|||||+||+++|..|++.. .|.+|+|||+.+.
T Consensus 24 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~ 62 (550)
T 2e4g_A 24 KIDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPDI 62 (550)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCCC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCCC
Confidence 3579999999999999999999965 6899999998753
No 274
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=97.29 E-value=0.00071 Score=65.68 Aligned_cols=46 Identities=11% Similarity=0.112 Sum_probs=35.7
Q ss_pred ceeEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEecceEEEccccCC
Q psy4525 270 SKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPSGIAFRSIGYQS 324 (388)
Q Consensus 270 ~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~p 324 (388)
+.|+++++++.++++..+ ++.+..++.. +++++.||.||+|+|..+
T Consensus 146 ~~GV~i~~~~~V~~i~~~-~~~v~~V~~~--------~G~~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 146 DLGVKIRTNTPVETIEYE-NGQTKAVILQ--------TGEVLETNHVVIAVGGKS 191 (447)
T ss_dssp HTTCEEECSCCEEEEEEE-TTEEEEEEET--------TCCEEECSCEEECCCCSS
T ss_pred HCCCEEEeCcEEEEEEec-CCcEEEEEEC--------CCCEEECCEEEECCCCCc
Confidence 468999999999999764 3565666542 334699999999999877
No 275
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=97.29 E-value=0.00011 Score=68.81 Aligned_cols=34 Identities=21% Similarity=0.309 Sum_probs=30.7
Q ss_pred CcEEEECccHHHHHHHHHHHhhCCC------CcEEEEcCCCC
Q psy4525 14 PNVCIVGSGPAGFYCAQQILKLLPQ------STVDIYEKLPV 49 (388)
Q Consensus 14 ~~vvIIGaG~aGl~aA~~l~~~~~g------~~v~lie~~~~ 49 (388)
+||+|||||++|+++|..|++ .| .+|+|+|+...
T Consensus 1 mdVvIIGgGi~Gls~A~~La~--~G~~~~p~~~V~vlE~~~~ 40 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHE--RYHSVLQPLDIKVYADRFT 40 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--HHTTTSSSCEEEEEESSCG
T ss_pred CcEEEECCCHHHHHHHHHHHH--hccccCCCceEEEEECCCC
Confidence 489999999999999999999 55 89999999853
No 276
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=97.29 E-value=0.00092 Score=63.03 Aligned_cols=137 Identities=9% Similarity=0.148 Sum_probs=77.5
Q ss_pred eEEEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecCccccc------CCHHHHHHHhcCC---
Q psy4525 154 EATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRGALQVA------FTIKEFREMTKLP--- 224 (388)
Q Consensus 154 ~vvVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~~~~~~------~~~~el~~l~~~~--- 224 (388)
.|+|||||.+|+-+|..|+ +.|. +|+++.|++.+..+ .++.-+.++.-..
T Consensus 6 DViIVGaGpaGl~~A~~La--------------------~~G~-~V~v~Er~~~~~~~~~~g~~l~~~~l~~l~~~~~~~ 64 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAA--------------------KYGL-KTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRS 64 (397)
T ss_dssp EEEEECCSHHHHHHHHHHH--------------------HTTC-CEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTT
T ss_pred CEEEECcCHHHHHHHHHHH--------------------HCCC-cEEEEeCCCCCCCCCceecccCHHHHHHcCCCchhh
Confidence 5999999999999999887 4554 59999987654322 1223333332111
Q ss_pred CceE------Eecccccccch-h---hhc--cccchhhHHHHHHHhhCCCCCCCCCCceeEEEEecCcceeeeeCCCCce
Q psy4525 225 HVQT------VFRNEQLCGVH-E---ASA--TLARPRKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTEFKLNDNGAI 292 (388)
Q Consensus 225 ~~~~------~~~~~~~~~~~-~---~~~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~v 292 (388)
.+.. .+.+.....+. . ... ...-.+..+...+...+. +.|+++++++.++.+..+ ++.+
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~~~~~L~~~a~--------~~G~~~~~~~~v~~~~~~-~~~~ 135 (397)
T 3oz2_A 65 FIANEVKGARIYGPSEKRPIILQSEKAGNEVGYVLERDKFDKHLAALAA--------KAGADVWVKSPALGVIKE-NGKV 135 (397)
T ss_dssp TEEEEESEEEEECTTCSSCEEEECSSSSCCCEEEECHHHHHHHHHHHHH--------HHTCEEESSCCEEEEEEE-TTEE
T ss_pred hhhcccceEEEEeCCCceEeeccccccCCceeEEEEHHHHHHHHHHHHH--------hcCcEEeeeeeeeeeeec-ccee
Confidence 1111 11111110000 0 000 001113444444443322 578999999999988764 4566
Q ss_pred eEEEEccCccccCCceeEEecceEEEccccCCc
Q psy4525 293 TGINFANQQALVTEDTELIPSGIAFRSIGYQSR 325 (388)
Q Consensus 293 ~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~p~ 325 (388)
..+... ..++..++.||.||-|.|....
T Consensus 136 ~~v~~~-----~~~~~~~~~a~~vIgAdG~~S~ 163 (397)
T 3oz2_A 136 AGAKIR-----HNNEIVDVRAKMVIAADGFESE 163 (397)
T ss_dssp EEEEEE-----ETTEEEEEEEEEEEECCCTTCH
T ss_pred eeeeec-----ccccceEEEEeEEEeCCccccH
Confidence 555442 2455678999999999998753
No 277
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=97.26 E-value=0.0002 Score=74.19 Aligned_cols=41 Identities=32% Similarity=0.379 Sum_probs=37.1
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCce
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLV 54 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~ 54 (388)
..++|+|||||++|+++|..|.+ .|.+|+|+|+.+.+||..
T Consensus 335 ~~~~v~viG~G~~Gl~aA~~l~~--~g~~v~v~E~~~~~ggri 375 (776)
T 4gut_A 335 HNKSVIIIGAGPAGLAAARQLHN--FGIKVTVLEAKDRIGGRV 375 (776)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHH--HTCEEEEECSSSSSCTTC
T ss_pred CCCeEEEECCCHHHHHHHHHHHH--CCCcEEEEecccceecee
Confidence 35799999999999999999999 799999999998888743
No 278
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=97.26 E-value=0.00025 Score=70.59 Aligned_cols=37 Identities=30% Similarity=0.581 Sum_probs=32.7
Q ss_pred CCcEEEECccHHHHHHHHHHHhhC-CCCcEEEEcCCCC
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLL-PQSTVDIYEKLPV 49 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~-~g~~v~lie~~~~ 49 (388)
.++|+|||||++|+++|..|++.. .|.+|+|+|+...
T Consensus 5 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~ 42 (538)
T 2aqj_A 5 IKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAAI 42 (538)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCCC
Confidence 479999999999999999999855 6899999999643
No 279
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=97.26 E-value=0.00013 Score=70.72 Aligned_cols=37 Identities=19% Similarity=0.224 Sum_probs=32.3
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCC-CcEEEEcCCCCC
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQ-STVDIYEKLPVP 50 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g-~~v~lie~~~~~ 50 (388)
..+||+|||||++|+++|..|++ .| .+|+|+|+...+
T Consensus 22 ~~~dVvIIGgGiaGls~A~~La~--~G~~~V~vlE~~~~~ 59 (448)
T 3axb_A 22 PRFDYVVVGAGVVGLAAAYYLKV--WSGGSVLVVDAGHAP 59 (448)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH--HHCSCEEEEESSSST
T ss_pred CcCCEEEECcCHHHHHHHHHHHh--CCCCcEEEEccCCCC
Confidence 45799999999999999999999 78 899999993333
No 280
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=97.22 E-value=0.00027 Score=67.30 Aligned_cols=37 Identities=27% Similarity=0.256 Sum_probs=32.2
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCC-CcEEEEcCCCCC
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQ-STVDIYEKLPVP 50 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g-~~v~lie~~~~~ 50 (388)
.++|+|||||++|+++|..|++. .| .+|+|+|+.+..
T Consensus 21 ~~dVvIIG~G~~Gl~~A~~La~~-~G~~~V~vlE~~~~~ 58 (405)
T 2gag_B 21 SYDAIIVGGGGHGLATAYFLAKN-HGITNVAVLEKGWLA 58 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH-HCCCCEEEECSSSTT
T ss_pred cCCEEEECcCHHHHHHHHHHHHh-cCCCcEEEEeCCCCC
Confidence 57999999999999999999982 27 899999998743
No 281
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=97.21 E-value=0.0018 Score=61.91 Aligned_cols=47 Identities=6% Similarity=-0.108 Sum_probs=33.8
Q ss_pred ceeEEEEecCcceeeeeCC---CCceeEEEEccCccccCCceeEEecceEEEccccCCcc
Q psy4525 270 SKYFRPIFLRSPTEFKLND---NGAITGINFANQQALVTEDTELIPSGIAFRSIGYQSRC 326 (388)
Q Consensus 270 ~~gv~~~~~~~~~~i~~~~---~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~p~~ 326 (388)
+.|+++++++.++++..++ ++.+ .++ +.++ ++.||.||+|+|..+.+
T Consensus 121 ~~Gv~i~~~~~v~~i~~~~~g~~~~~-~v~--------~~~g-~i~ad~VVlAtG~~s~p 170 (401)
T 2gqf_A 121 KYGAKILLRSEVSQVERIQNDEKVRF-VLQ--------VNST-QWQCKNLIVATGGLSMP 170 (401)
T ss_dssp HHTCEEECSCCEEEEEECCSCSSCCE-EEE--------ETTE-EEEESEEEECCCCSSCG
T ss_pred HCCCEEEeCCEEEEEEcccCcCCCeE-EEE--------ECCC-EEECCEEEECCCCccCC
Confidence 5689999999999998541 1222 232 2333 69999999999998843
No 282
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=97.19 E-value=0.00066 Score=67.09 Aligned_cols=50 Identities=12% Similarity=0.067 Sum_probs=39.2
Q ss_pred ceeEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEecc-eEEEccccCC
Q psy4525 270 SKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPSG-IAFRSIGYQS 324 (388)
Q Consensus 270 ~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D-~Vi~a~G~~p 324 (388)
+.|+++++++.++++..+++++|.++...+ .++..++.|| .||+|||--.
T Consensus 214 ~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~-----~g~~~~i~A~k~VVlAtGG~~ 264 (510)
T 4at0_A 214 KLGVRAEYDMRVQTLVTDDTGRVVGIVAKQ-----YGKEVAVRARRGVVLATGSFA 264 (510)
T ss_dssp HTTCEEECSEEEEEEEECTTCCEEEEEEEE-----TTEEEEEEEEEEEEECCCCCT
T ss_pred HcCCEEEecCEeEEEEECCCCcEEEEEEEE-----CCcEEEEEeCCeEEEeCCChh
Confidence 468999999999999886568898887643 2334579997 9999999654
No 283
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.18 E-value=0.00087 Score=61.61 Aligned_cols=84 Identities=14% Similarity=0.137 Sum_probs=58.6
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCCCCCCcchhHHHHHHHHhhcCCCcEEEceEEEEE-
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTKTGDNPRVNFYGNICLGQ- 91 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~- 91 (388)
.++++|||+|+.|+.+|..|.+ .+.+|+++++.+.+. + ...+.+ .+.+.|++++.++.+..
T Consensus 155 ~~~v~viG~G~~g~e~a~~l~~--~g~~V~~i~~~~~~~--------~----~~~l~~----~l~~~gv~i~~~~~v~~i 216 (319)
T 3cty_A 155 GKRVVTIGGGNSGAIAAISMSE--YVKNVTIIEYMPKYM--------C----ENAYVQ----EIKKRNIPYIMNAQVTEI 216 (319)
T ss_dssp TSEEEEECCSHHHHHHHHHHTT--TBSEEEEECSSSSCC--------S----CHHHHH----HHHHTTCCEECSEEEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHh--hCCcEEEEEcCCccC--------C----CHHHHH----HHhcCCcEEEcCCeEEEE
Confidence 5789999999999999999999 799999999875431 1 122222 23356888887766532
Q ss_pred --------Eeeec---cc---ccccCEEEEeeCCCCC
Q psy4525 92 --------DISLG---DL---TNAYHAVVLTYGADND 114 (388)
Q Consensus 92 --------~~~~~---~~---~~~yd~lvlAtG~~~~ 114 (388)
.+... +. ...+|.||+|+|..+.
T Consensus 217 ~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~ 253 (319)
T 3cty_A 217 VGDGKKVTGVKYKDRTTGEEKLIETDGVFIYVGLIPQ 253 (319)
T ss_dssp EESSSSEEEEEEEETTTCCEEEECCSEEEECCCEEEC
T ss_pred ecCCceEEEEEEEEcCCCceEEEecCEEEEeeCCccC
Confidence 12222 22 2378999999997663
No 284
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=97.17 E-value=0.00026 Score=71.25 Aligned_cols=36 Identities=25% Similarity=0.363 Sum_probs=32.9
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCC
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVP 50 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~ 50 (388)
..||+|||||+||++||..|++ .|.+|+|+|+.+..
T Consensus 7 ~~DVvVVGaG~AGl~AA~~la~--~G~~V~vlEK~~~~ 42 (588)
T 2wdq_A 7 EFDAVVIGAGGAGMRAALQISQ--SGQTCALLSKVFPT 42 (588)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH--TTCCEEEEESSCGG
T ss_pred cCCEEEECcCHHHHHHHHHHHH--CCCcEEEEecCCCC
Confidence 4699999999999999999999 89999999998654
No 285
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=97.16 E-value=0.0018 Score=64.96 Aligned_cols=51 Identities=12% Similarity=0.102 Sum_probs=38.5
Q ss_pred ceeEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEecceEEEccccCC
Q psy4525 270 SKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPSGIAFRSIGYQS 324 (388)
Q Consensus 270 ~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~p 324 (388)
+.|+++++++.++++..++++++.++.+.+. .+...++.+|.||+|+|...
T Consensus 267 ~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~----~g~~~~i~a~~VVlAtGg~~ 317 (571)
T 1y0p_A 267 KRNIDLRMNTRGIEVLKDDKGTVKGILVKGM----YKGYYWVKADAVILATGGFA 317 (571)
T ss_dssp HTTCEEESSEEEEEEEECTTSCEEEEEEEET----TTEEEEEECSEEEECCCCCT
T ss_pred hcCCEEEeCCEeeEeEEcCCCeEEEEEEEeC----CCcEEEEECCeEEEeCCCcc
Confidence 4689999999999998754478888776421 23334799999999999743
No 286
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=97.14 E-value=0.0011 Score=60.68 Aligned_cols=36 Identities=25% Similarity=0.221 Sum_probs=32.5
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCC
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPV 49 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~ 49 (388)
..++++|||+|+.|+.+|..|.+ .|.+|+++++.+.
T Consensus 151 ~~~~vvViGgG~ig~e~A~~l~~--~G~~Vt~v~~~~~ 186 (314)
T 4a5l_A 151 RNKVLMVVGGGDAAMEEALHLTK--YGSKVIILHRRDA 186 (314)
T ss_dssp TTSEEEEECSSHHHHHHHHHHTT--TSSEEEEECSSSS
T ss_pred CCCeEEEECCChHHHHHHHHHHH--hCCeeeeeccccc
Confidence 45799999999999999999999 8999999998643
No 287
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.14 E-value=0.00075 Score=69.28 Aligned_cols=92 Identities=11% Similarity=-0.096 Sum_probs=64.9
Q ss_pred CCCcEEEEC--ccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCCCCCCcchhHHHHHHHHhhcCCCcEEEceEEE
Q psy4525 12 LKPNVCIVG--SGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTKTGDNPRVNFYGNICL 89 (388)
Q Consensus 12 ~~~~vvIIG--aG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v 89 (388)
..++|+||| +|+.|+.+|..|.+ .+.+|+++++.+.+.... ........+.+.+++.|++++.++.+
T Consensus 522 ~g~~VvViG~ggG~~g~e~A~~L~~--~g~~Vtlv~~~~~l~~~~---------~~~~~~~~l~~~l~~~GV~i~~~~~V 590 (690)
T 3k30_A 522 DGKKVVVYDDDHYYLGGVVAELLAQ--KGYEVSIVTPGAQVSSWT---------NNTFEVNRIQRRLIENGVARVTDHAV 590 (690)
T ss_dssp SSSEEEEEECSCSSHHHHHHHHHHH--TTCEEEEEESSSSTTGGG---------GGGTCHHHHHHHHHHTTCEEEESEEE
T ss_pred CCCEEEEEcCCCCccHHHHHHHHHh--CCCeeEEEeccccccccc---------ccchhHHHHHHHHHHCCCEEEcCcEE
Confidence 356899999 99999999999999 899999999886643211 11123344556667789999988776
Q ss_pred EEE------eee---ccc-ccccCEEEEeeCCCCC
Q psy4525 90 GQD------ISL---GDL-TNAYHAVVLTYGADND 114 (388)
Q Consensus 90 ~~~------~~~---~~~-~~~yd~lvlAtG~~~~ 114 (388)
... +.. .+. ...+|.||+|+|..+.
T Consensus 591 ~~i~~~~~~v~~~~~~~~~~i~aD~VV~A~G~~p~ 625 (690)
T 3k30_A 591 VAVGAGGVTVRDTYASIERELECDAVVMVTARLPR 625 (690)
T ss_dssp EEEETTEEEEEETTTCCEEEEECSEEEEESCEEEC
T ss_pred EEEECCeEEEEEccCCeEEEEECCEEEECCCCCCC
Confidence 421 221 112 2379999999997763
No 288
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=97.12 E-value=0.00044 Score=69.39 Aligned_cols=39 Identities=21% Similarity=0.187 Sum_probs=34.4
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCC
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFG 52 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg 52 (388)
..+||+|||||.+|+++|..|++ .|.+|+|+|+.+..+|
T Consensus 31 ~~~DVvVIGgGi~G~~~A~~La~--rG~~V~LlE~~~~~~G 69 (571)
T 2rgh_A 31 EELDLLIIGGGITGAGVAVQAAA--SGIKTGLIEMQDFAEG 69 (571)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSTTCS
T ss_pred CCCCEEEECcCHHHHHHHHHHHH--CCCcEEEEeCCCCCCC
Confidence 35799999999999999999999 8999999999864433
No 289
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=97.12 E-value=0.00067 Score=67.61 Aligned_cols=45 Identities=16% Similarity=0.213 Sum_probs=28.5
Q ss_pred EEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEecceEEEccc--cCCcc
Q psy4525 274 RPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPSGIAFRSIG--YQSRC 326 (388)
Q Consensus 274 ~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G--~~p~~ 326 (388)
.+++++.++++..+++...-.++ +.+++++.||.||+|+| .+|+.
T Consensus 105 ~i~~~~~V~~~~~~~~~~~w~V~--------~~~G~~~~ad~lV~AtG~~s~p~~ 151 (545)
T 3uox_A 105 HYRFNTRVTAARYVENDRLWEVT--------LDNEEVVTCRFLISATGPLSASRM 151 (545)
T ss_dssp GEECSCCEEEEEEEGGGTEEEEE--------ETTTEEEEEEEEEECCCSCBC---
T ss_pred cEEECCEEEEEEEeCCCCEEEEE--------ECCCCEEEeCEEEECcCCCCCCcC
Confidence 56677888887754433333333 34566899999999999 45554
No 290
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=97.11 E-value=0.00033 Score=70.90 Aligned_cols=35 Identities=23% Similarity=0.243 Sum_probs=32.3
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCC
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPV 49 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~ 49 (388)
..||+|||||+||++||..|++ .|.+|+|+|+.+.
T Consensus 18 ~~DVvVVG~G~AGl~AAl~aa~--~G~~V~vlEK~~~ 52 (621)
T 2h88_A 18 EFDAVVVGAGGAGLRAAFGLSE--AGFNTACVTKLFP 52 (621)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH--TTCCEEEEESSCG
T ss_pred cCCEEEECccHHHHHHHHHHHH--CCCcEEEEeccCC
Confidence 4699999999999999999999 8999999999754
No 291
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=97.09 E-value=0.00037 Score=71.05 Aligned_cols=36 Identities=19% Similarity=0.280 Sum_probs=32.8
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCC
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVP 50 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~ 50 (388)
..||+|||||.||++||..|++ .|.+|+|+|+.+..
T Consensus 5 ~~DVvVIGgG~AGL~AAl~aae--~G~~V~vlEK~~~~ 40 (660)
T 2bs2_A 5 YCDSLVIGGGLAGLRAAVATQQ--KGLSTIVLSLIPVK 40 (660)
T ss_dssp ECSEEEECCSHHHHHHHHHHHT--TTCCEEEECSSCGG
T ss_pred cccEEEECchHHHHHHHHHHHH--CCCcEEEEeccCCC
Confidence 3699999999999999999999 89999999998643
No 292
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=97.09 E-value=0.00024 Score=70.24 Aligned_cols=36 Identities=31% Similarity=0.411 Sum_probs=30.2
Q ss_pred CcEEEECccHHHHHHHHHHHhhC-CCCcEEEEcCCCC
Q psy4525 14 PNVCIVGSGPAGFYCAQQILKLL-PQSTVDIYEKLPV 49 (388)
Q Consensus 14 ~~vvIIGaG~aGl~aA~~l~~~~-~g~~v~lie~~~~ 49 (388)
++|+|||||++|+++|..|++.. .|.+|+|+|+.+.
T Consensus 3 ~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~~ 39 (511)
T 2weu_A 3 RSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGNV 39 (511)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC---
T ss_pred ceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCCC
Confidence 69999999999999999999843 5899999998753
No 293
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=97.06 E-value=0.0033 Score=63.19 Aligned_cols=56 Identities=9% Similarity=0.074 Sum_probs=39.8
Q ss_pred ceeEEEEecCcceeeeeCCCCceeEEEEccCccccCC-------ceeEEecceEEEccccCCc
Q psy4525 270 SKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTE-------DTELIPSGIAFRSIGYQSR 325 (388)
Q Consensus 270 ~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~-------~~~~l~~D~Vi~a~G~~p~ 325 (388)
+.|+++++++.++++..++++.+.++.+.+...-..+ ++.++.+|.||.|.|....
T Consensus 156 ~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S~ 218 (584)
T 2gmh_A 156 ALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHGH 218 (584)
T ss_dssp HTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTCH
T ss_pred HcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCch
Confidence 4589999999999998766577877776420000011 1357999999999998864
No 294
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=97.06 E-value=0.0023 Score=61.95 Aligned_cols=36 Identities=8% Similarity=-0.040 Sum_probs=32.5
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCc-EEEEcCCCC
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQST-VDIYEKLPV 49 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~-v~lie~~~~ 49 (388)
..++|+|||+|++|+.+|..|.+ .+.+ |+++++.+.
T Consensus 211 ~~k~VvVvG~G~sg~e~A~~l~~--~~~~~V~l~~r~~~ 247 (447)
T 2gv8_A 211 VGESVLVVGGASSANDLVRHLTP--VAKHPIYQSLLGGG 247 (447)
T ss_dssp TTCCEEEECSSHHHHHHHHHHTT--TSCSSEEEECTTCC
T ss_pred CCCEEEEEccCcCHHHHHHHHHH--HhCCcEEEEeCCCC
Confidence 46899999999999999999999 7888 999998754
No 295
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=97.06 E-value=0.00018 Score=73.43 Aligned_cols=36 Identities=28% Similarity=0.399 Sum_probs=33.4
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCC--------CcEEEEcCCC-CC
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQ--------STVDIYEKLP-VP 50 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g--------~~v~lie~~~-~~ 50 (388)
+++|+|||||++||+||..|.+ .| ++|+|||+.+ .+
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~--~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGR--LAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH--HHTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHH--cCcccccCCCceEEEEeccCccc
Confidence 4789999999999999999998 66 8999999998 88
No 296
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=97.05 E-value=0.0038 Score=59.50 Aligned_cols=134 Identities=16% Similarity=0.127 Sum_probs=73.9
Q ss_pred CCeEEEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecCccccc-----CCHHHHHHHh-----
Q psy4525 152 CEEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRGALQVA-----FTIKEFREMT----- 221 (388)
Q Consensus 152 ~~~vvVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~~~~~~-----~~~~el~~l~----- 221 (388)
..+|+|||||.+|+-+|..|+ +.|. +|++++|.+..... +.+.-++.+.
T Consensus 23 ~~dV~IVGaG~aGl~~A~~La--------------------~~G~-~V~v~E~~~~~~~~~~~~~l~~~~~~~l~~lg~~ 81 (407)
T 3rp8_A 23 HMKAIVIGAGIGGLSAAVALK--------------------QSGI-DCDVYEAVKEIKPVGAAISVWPNGVKCMAHLGMG 81 (407)
T ss_dssp CCEEEEECCSHHHHHHHHHHH--------------------HTTC-EEEEEESSSCC----CEEEECHHHHHHHHHTTCH
T ss_pred CCEEEEECCCHHHHHHHHHHH--------------------hCCC-CEEEEeCCCCCCCcCeeEEECHHHHHHHHHCCCH
Confidence 468999999999999999886 3454 69999988653211 1111111111
Q ss_pred ------cCCCceEEecccc-cc---cch-----hh--hccccchhhHHHHHHHhhCCCCCCCCCCceeEEEEecCcceee
Q psy4525 222 ------KLPHVQTVFRNEQ-LC---GVH-----EA--SATLARPRKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTEF 284 (388)
Q Consensus 222 ------~~~~~~~~~~~~~-~~---~~~-----~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i 284 (388)
..+.....+.... -. .+. .. .....-.+..+...|...+. . +.+++++.++++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~---------~-~~i~~~~~v~~i 151 (407)
T 3rp8_A 82 DIMETFGGPLRRMAYRDFRSGENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWG---------R-DSVQFGKRVTRC 151 (407)
T ss_dssp HHHHHHSCCCCEEEEEETTTCCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHC---------G-GGEEESCCEEEE
T ss_pred HHHHhhcCCCcceEEEECCCCCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCC---------c-CEEEECCEEEEE
Confidence 1111112111111 00 000 00 00111124555566655442 2 778899999999
Q ss_pred eeCCCCceeEEEEccCccccCCceeEEecceEEEccccCCcc
Q psy4525 285 KLNDNGAITGINFANQQALVTEDTELIPSGIAFRSIGYQSRC 326 (388)
Q Consensus 285 ~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~p~~ 326 (388)
..++ +.+ .+.+ .+++++.||.||.|.|.....
T Consensus 152 ~~~~-~~v-~v~~--------~~g~~~~a~~vV~AdG~~S~v 183 (407)
T 3rp8_A 152 EEDA-DGV-TVWF--------TDGSSASGDLLIAADGSHSAL 183 (407)
T ss_dssp EEET-TEE-EEEE--------TTSCEEEESEEEECCCTTCSS
T ss_pred EecC-CcE-EEEE--------cCCCEEeeCEEEECCCcChHH
Confidence 8654 322 2332 345589999999999987543
No 297
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=97.05 E-value=0.0046 Score=62.34 Aligned_cols=46 Identities=9% Similarity=0.055 Sum_probs=34.3
Q ss_pred eeEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEecceEEEccccCCcc
Q psy4525 271 KYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPSGIAFRSIGYQSRC 326 (388)
Q Consensus 271 ~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~p~~ 326 (388)
.|+++ +...++.+..+ ++.+.++.. .++.++.||.||+|||..+..
T Consensus 138 ~GV~I-~~~~V~~L~~e-~g~V~GV~t--------~dG~~I~Ad~VVLATGt~s~~ 183 (651)
T 3ces_A 138 PNLMI-FQQAVEDLIVE-NDRVVGAVT--------QMGLKFRAKAVVLTVGTFLDG 183 (651)
T ss_dssp TTEEE-EECCEEEEEES-SSBEEEEEE--------TTSEEEEEEEEEECCSTTTCC
T ss_pred CCCEE-EEEEEEEEEec-CCEEEEEEE--------CCCCEEECCEEEEcCCCCccC
Confidence 58888 66788888754 466767754 334689999999999987653
No 298
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=97.04 E-value=0.00045 Score=68.80 Aligned_cols=37 Identities=38% Similarity=0.486 Sum_probs=32.7
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCC
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFG 52 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg 52 (388)
..||+|||||+||+++|..|++ |.+|+|+|+.+..+|
T Consensus 8 ~~DVvVVG~G~AGl~aAl~la~---G~~V~vlEk~~~~~g 44 (540)
T 1chu_A 8 SCDVLIIGSGAAGLSLALRLAD---QHQVIVLSKGPVTEG 44 (540)
T ss_dssp ECSEEEECCSHHHHHHHHHHTT---TSCEEEECSSCTTC-
T ss_pred CCCEEEECccHHHHHHHHHHhc---CCcEEEEECCCCCCC
Confidence 4799999999999999999987 899999999876553
No 299
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=97.03 E-value=0.00036 Score=70.39 Aligned_cols=35 Identities=23% Similarity=0.413 Sum_probs=31.8
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCC--CcEEEEcCCCC
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQ--STVDIYEKLPV 49 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g--~~v~lie~~~~ 49 (388)
.+||+|||||+||+++|..|++ .| .+|+|+|+.+.
T Consensus 5 ~~DVvIVG~G~AGl~aAl~la~--~G~~~~V~vlEk~~~ 41 (602)
T 1kf6_A 5 QADLAIVGAGGAGLRAAIAAAQ--ANPNAKIALISKVYP 41 (602)
T ss_dssp ECSEEEECCSHHHHHHHHHHHH--HCTTCCEEEEESSCG
T ss_pred cCCEEEECCCHHHHHHHHHHHh--cCCCCcEEEEeCCCC
Confidence 3699999999999999999999 78 99999999754
No 300
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=96.99 E-value=0.0054 Score=57.11 Aligned_cols=49 Identities=10% Similarity=0.226 Sum_probs=35.5
Q ss_pred ceeEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEecceEEEccccCCc
Q psy4525 270 SKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPSGIAFRSIGYQSR 325 (388)
Q Consensus 270 ~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~p~ 325 (388)
+.|+++++++.++++..++++.+ .+... .++..++.||.||+|+|....
T Consensus 162 ~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~------~g~~~~~~a~~VV~A~G~~s~ 210 (369)
T 3dme_A 162 SDGAQLVFHTPLIAGRVRPEGGF-ELDFG------GAEPMTLSCRVLINAAGLHAP 210 (369)
T ss_dssp HTTCEEECSCCEEEEEECTTSSE-EEEEC------TTSCEEEEEEEEEECCGGGHH
T ss_pred HCCCEEECCCEEEEEEEcCCceE-EEEEC------CCceeEEEeCEEEECCCcchH
Confidence 56899999999999987654433 34432 233358999999999998653
No 301
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=96.99 E-value=0.0024 Score=63.92 Aligned_cols=51 Identities=10% Similarity=0.086 Sum_probs=38.0
Q ss_pred ceeEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEecceEEEccccCC
Q psy4525 270 SKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPSGIAFRSIGYQS 324 (388)
Q Consensus 270 ~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~p 324 (388)
+.|+++++++.++++..+++++|.++.+.+. .++...+.+|.||+|+|-..
T Consensus 262 ~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~----~g~~~~i~A~~VVlAtGg~s 312 (566)
T 1qo8_A 262 EQGIDTRLNSRVVKLVVNDDHSVVGAVVHGK----HTGYYMIGAKSVVLATGGYG 312 (566)
T ss_dssp HTTCCEECSEEEEEEEECTTSBEEEEEEEET----TTEEEEEEEEEEEECCCCCT
T ss_pred hcCCEEEeCCEEEEEEECCCCcEEEEEEEeC----CCcEEEEEcCEEEEecCCcc
Confidence 4689999999999998754378888776421 23334789999999999654
No 302
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=96.99 E-value=0.0039 Score=62.63 Aligned_cols=46 Identities=7% Similarity=-0.018 Sum_probs=34.4
Q ss_pred eeEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEecceEEEccccCCcc
Q psy4525 271 KYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPSGIAFRSIGYQSRC 326 (388)
Q Consensus 271 ~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~p~~ 326 (388)
.|+++ +...++++..+ ++.+.++.. .++.++.||.||+|||..++.
T Consensus 137 ~GVeI-~~~~Vt~L~~e-~g~V~GV~t--------~dG~~i~AdaVVLATG~~s~~ 182 (637)
T 2zxi_A 137 ENLYI-KQEEVVDIIVK-NNQVVGVRT--------NLGVEYKTKAVVVTTGTFLNG 182 (637)
T ss_dssp TTEEE-EESCEEEEEES-SSBEEEEEE--------TTSCEEECSEEEECCTTCBTC
T ss_pred CCCEE-EEeEEEEEEec-CCEEEEEEE--------CCCcEEEeCEEEEccCCCccC
Confidence 58888 57788888764 467777764 334689999999999987653
No 303
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=96.96 E-value=0.0005 Score=69.94 Aligned_cols=37 Identities=38% Similarity=0.548 Sum_probs=32.2
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCC
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVP 50 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~ 50 (388)
.++|+||||||+|+++|..|++. .|++|+|||+.+.+
T Consensus 32 ~~dVlIVGaGpaGL~~A~~La~~-~G~~V~viEr~~~~ 68 (639)
T 2dkh_A 32 QVDVLIVGCGPAGLTLAAQLAAF-PDIRTCIVEQKEGP 68 (639)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTC-TTSCEEEECSSSSC
T ss_pred CCcEEEECcCHHHHHHHHHHHHh-CCCCEEEEeCCCCC
Confidence 46899999999999999999972 38999999987654
No 304
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=96.95 E-value=0.00037 Score=71.19 Aligned_cols=37 Identities=35% Similarity=0.530 Sum_probs=31.8
Q ss_pred CCcEEEECccHHHHHHHHHHHhh---CCCCcEEEEcCCCC
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKL---LPQSTVDIYEKLPV 49 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~---~~g~~v~lie~~~~ 49 (388)
.++|+||||||+|+++|..|++. ..|++|+|||+.+.
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~ 47 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRST 47 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSS
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCC
Confidence 47999999999999999999982 14899999998754
No 305
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=96.95 E-value=0.00061 Score=69.41 Aligned_cols=37 Identities=16% Similarity=0.326 Sum_probs=31.6
Q ss_pred CCcEEEECccHHHHHHHHHHHhh----CCCCcEEEEcCCCC
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKL----LPQSTVDIYEKLPV 49 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~----~~g~~v~lie~~~~ 49 (388)
.+||+|||||+||++||..|++. .+|.+|+|+|+...
T Consensus 22 ~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~~ 62 (662)
T 3gyx_A 22 SVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKASL 62 (662)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSCT
T ss_pred EcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecCC
Confidence 37999999999999999999982 12999999998753
No 306
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=96.94 E-value=0.011 Score=56.13 Aligned_cols=58 Identities=16% Similarity=0.186 Sum_probs=38.3
Q ss_pred hhHHHHHHHhhCCCCCCCCCCceeEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEecceEEEccccCCcc
Q psy4525 249 RKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPSGIAFRSIGYQSRC 326 (388)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~p~~ 326 (388)
+..+...|...+. ++.+++++.++++..++ +.+ .+++ .+++++.+|.||.|.|.....
T Consensus 127 r~~l~~~L~~~~~----------~~~i~~~~~v~~i~~~~-~~v-~v~~--------~~g~~~~ad~vV~AdG~~S~v 184 (398)
T 2xdo_A 127 RNDLRAILLNSLE----------NDTVIWDRKLVMLEPGK-KKW-TLTF--------ENKPSETADLVILANGGMSKV 184 (398)
T ss_dssp HHHHHHHHHHTSC----------TTSEEESCCEEEEEECS-SSE-EEEE--------TTSCCEEESEEEECSCTTCSC
T ss_pred HHHHHHHHHhhcC----------CCEEEECCEEEEEEECC-CEE-EEEE--------CCCcEEecCEEEECCCcchhH
Confidence 4455556655431 24678899999998654 333 2433 334578999999999988654
No 307
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=96.94 E-value=0.00082 Score=70.53 Aligned_cols=36 Identities=19% Similarity=0.462 Sum_probs=32.6
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCC-cEEEEcCCCC
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQS-TVDIYEKLPV 49 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~-~v~lie~~~~ 49 (388)
..++|+|||||++|+++|..|++ .|. +|+|+|+...
T Consensus 3 ~~~dVvIIGgGi~Gls~A~~La~--~G~~~V~vlE~~~~ 39 (830)
T 1pj5_A 3 STPRIVIIGAGIVGTNLADELVT--RGWNNITVLDQGPL 39 (830)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHH--TTCCCEEEECSSCT
T ss_pred CCCCEEEECcCHHHHHHHHHHHh--CCCCcEEEEeCCCC
Confidence 35799999999999999999999 898 9999999865
No 308
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=96.93 E-value=0.0074 Score=60.43 Aligned_cols=51 Identities=10% Similarity=0.042 Sum_probs=37.6
Q ss_pred ceeEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEecceEEEccccCC
Q psy4525 270 SKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPSGIAFRSIGYQS 324 (388)
Q Consensus 270 ~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~p 324 (388)
+.||++++++.++++..++++++.++.+.+. .++..++.+|.||+|+|-.+
T Consensus 267 ~~gv~i~~~t~v~~l~~~~~g~v~GV~~~~~----~G~~~~i~A~~VVlAtGg~~ 317 (572)
T 1d4d_A 267 KRGTDIRLNSRVVRILEDASGKVTGVLVKGE----YTGYYVIKADAVVIAAGGFA 317 (572)
T ss_dssp HTTCEEESSEEEEEEEEC--CCEEEEEEEET----TTEEEEEECSEEEECCCCCT
T ss_pred HcCCeEEecCEEEEEEECCCCeEEEEEEEeC----CCcEEEEEcCEEEEeCCCCc
Confidence 4689999999999997653378888876421 23335799999999999654
No 309
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=96.91 E-value=0.0017 Score=65.30 Aligned_cols=50 Identities=10% Similarity=0.025 Sum_probs=37.1
Q ss_pred ceeEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEecceEEEccccCCc
Q psy4525 270 SKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPSGIAFRSIGYQSR 325 (388)
Q Consensus 270 ~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~p~ 325 (388)
+.|+++++++.++++..+ ++.+..+.+.+ .+...++.||.||.|+|....
T Consensus 140 ~~Gv~i~~g~~V~~v~~~-~g~~~~V~~~~-----~G~~~~i~AdlVV~AdG~~S~ 189 (591)
T 3i3l_A 140 SRGITVHEETPVTDVDLS-DPDRVVLTVRR-----GGESVTVESDFVIDAGGSGGP 189 (591)
T ss_dssp HTTCEEETTCCEEEEECC-STTCEEEEEEE-----TTEEEEEEESEEEECCGGGCH
T ss_pred hCCCEEEeCCEEEEEEEc-CCCEEEEEEec-----CCceEEEEcCEEEECCCCcch
Confidence 468999999999999864 35556665531 233368999999999998763
No 310
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=96.90 E-value=0.0057 Score=60.79 Aligned_cols=44 Identities=9% Similarity=0.022 Sum_probs=29.8
Q ss_pred eEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEecceEEEccccC
Q psy4525 272 YFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPSGIAFRSIGYQ 323 (388)
Q Consensus 272 gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~ 323 (388)
+..+++++.++++..++++..-.+++ .+++++.||.||+|+|..
T Consensus 110 ~~~i~~~~~V~~~~~~~~~~~w~V~~--------~~G~~~~ad~vV~AtG~~ 153 (542)
T 1w4x_A 110 RSGITFHTTVTAAAFDEATNTWTVDT--------NHGDRIRARYLIMASGQL 153 (542)
T ss_dssp GGGEECSCCEEEEEEETTTTEEEEEE--------TTCCEEEEEEEEECCCSC
T ss_pred CceEEcCcEEEEEEEcCCCCeEEEEE--------CCCCEEEeCEEEECcCCC
Confidence 35677888888887644332223432 345679999999999964
No 311
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=96.89 E-value=0.0053 Score=62.81 Aligned_cols=60 Identities=12% Similarity=0.108 Sum_probs=39.8
Q ss_pred ceeEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEecceEEEccccCCccCC--CCCcccCCCcc
Q psy4525 270 SKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPSGIAFRSIGYQSRCVD--SDIPFNEKSCT 339 (388)
Q Consensus 270 ~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~p~~~~--~~l~~~~~~gi 339 (388)
+.|+++++++.++++..++ +.+ .++ +.++.++.||.||+|+|.....+. .++++...+|.
T Consensus 429 ~~Gv~i~~~t~V~~l~~~~-~~v-~V~--------t~~G~~i~Ad~VVlAtG~~s~~l~~~~~lpl~p~rGq 490 (676)
T 3ps9_A 429 QQGLQIYYQYQLQNFSRKD-DCW-LLN--------FAGDQQATHSVVVLANGHQISRFSQTSTLPVYSVAGQ 490 (676)
T ss_dssp HTTCEEEESCCEEEEEEET-TEE-EEE--------ETTSCEEEESEEEECCGGGGGCSTTTTTCSCEEEEEE
T ss_pred hCCCEEEeCCeeeEEEEeC-CeE-EEE--------ECCCCEEECCEEEECCCcchhccccccCCcceeecCE
Confidence 4689999999999998654 333 343 334457999999999998755432 23444433343
No 312
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=96.87 E-value=0.0028 Score=63.47 Aligned_cols=136 Identities=13% Similarity=0.082 Sum_probs=74.1
Q ss_pred CeEEEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecCcccc-----cCCHHHHHHHhcCC---
Q psy4525 153 EEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRGALQV-----AFTIKEFREMTKLP--- 224 (388)
Q Consensus 153 ~~vvVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~~~~~-----~~~~~el~~l~~~~--- 224 (388)
-+|+|||+|.+|+-+|..|+ +.|. +|++++|...... .+.+.-++-+..+-
T Consensus 50 ~DVvIVGaG~aGL~~A~~La--------------------~~G~-~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~ 108 (570)
T 3fmw_A 50 TDVVVVGGGPVGLMLAGELR--------------------AGGV-GALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLD 108 (570)
T ss_dssp -CEEEECCSHHHHHHHHHHH--------------------HTTC-CEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHH
T ss_pred CCEEEECcCHHHHHHHHHHH--------------------HCCC-CEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChH
Confidence 47999999999999999886 3554 6999998764321 12222222111110
Q ss_pred -----Cc---eEEeccc---cc--ccchh-hhccccchhhHHHHHHHhhCCCCCCCCCCceeEEEEecCcceeeeeCCCC
Q psy4525 225 -----HV---QTVFRNE---QL--CGVHE-ASATLARPRKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTEFKLNDNG 290 (388)
Q Consensus 225 -----~~---~~~~~~~---~~--~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~ 290 (388)
.. ...+... .+ ..+.. .+....-.+..+...|...+. +.|+++++++.++.+..++++
T Consensus 109 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~--------~~gv~i~~~~~v~~l~~~~~~ 180 (570)
T 3fmw_A 109 RFLEGTQVAKGLPFAGIFTQGLDFGLVDTRHPYTGLVPQSRTEALLAEHAR--------EAGAEIPRGHEVTRLRQDAEA 180 (570)
T ss_dssp HHTTSCCBCSBCCBTTBCTTCCBGGGSCCSCCSBBCCCHHHHHHHHHHHHH--------HHTEECCBSCEEEECCBCSSC
T ss_pred HHHhcCcccCCceeCCcccccccccccCCCCCeeEEeCHHHHHHHHHHHHH--------hCCCEEEeCCEEEEEEEcCCe
Confidence 00 0000000 00 00000 000111124445555544432 458999999999999875433
Q ss_pred ceeEEEEccCccccCCce-eEEecceEEEccccCCc
Q psy4525 291 AITGINFANQQALVTEDT-ELIPSGIAFRSIGYQSR 325 (388)
Q Consensus 291 ~v~~v~~~~~~~~~~~~~-~~l~~D~Vi~a~G~~p~ 325 (388)
+. +.+. ..++ +++.||.||.|.|....
T Consensus 181 -v~-v~~~------~~~G~~~~~a~~vV~ADG~~S~ 208 (570)
T 3fmw_A 181 -VE-VTVA------GPSGPYPVRARYGVGCDGGRST 208 (570)
T ss_dssp -EE-EEEE------ETTEEEEEEESEEEECSCSSCH
T ss_pred -EE-EEEE------eCCCcEEEEeCEEEEcCCCCch
Confidence 22 3331 1344 68999999999998753
No 313
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=96.86 E-value=0.00098 Score=67.82 Aligned_cols=35 Identities=26% Similarity=0.320 Sum_probs=31.3
Q ss_pred CCcEEEECccHHHHHHHHHHH----hhCCCCcEEEEcCCCC
Q psy4525 13 KPNVCIVGSGPAGFYCAQQIL----KLLPQSTVDIYEKLPV 49 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~----~~~~g~~v~lie~~~~ 49 (388)
.+||+|||||+||++||..++ + .|.+|+|+|+.+.
T Consensus 22 ~~DVvVIG~G~AGl~AAl~aa~~~~~--~G~~V~vlEK~~~ 60 (643)
T 1jnr_A 22 ETDILIIGGGFSGCGAAYEAAYWAKL--GGLKVTLVEKAAV 60 (643)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHTT--TTCCEEEECSSCT
T ss_pred cCCEEEECcCHHHHHHHHHHhhhhhh--CCCeEEEEeCcCC
Confidence 479999999999999999999 3 5899999999864
No 314
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=96.85 E-value=0.0028 Score=62.74 Aligned_cols=84 Identities=17% Similarity=0.162 Sum_probs=59.5
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCCCCCCcchhHHHHHHHHhhcC-CCcEEEceEEEE
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTKTGDN-PRVNFYGNICLG 90 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~-~~i~~~~~~~v~ 90 (388)
..++|+|||+|+.|+.+|..|++ .+.+|+++++.+.+. +. ..+.+.+.+ .|++++.++.+.
T Consensus 354 ~~k~V~ViGgG~~g~E~A~~L~~--~g~~Vtlv~~~~~l~--------~~--------~~l~~~l~~~~gV~v~~~~~v~ 415 (521)
T 1hyu_A 354 KGKRVAVIGGGNSGVEAAIDLAG--IVEHVTLLEFAPEMK--------AD--------QVLQDKVRSLKNVDIILNAQTT 415 (521)
T ss_dssp BTSEEEEECCSHHHHHHHHHHHH--HBSEEEEECSSSSCC--------SC--------HHHHHHHTTCTTEEEECSEEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHh--hCCEEEEEEeCcccC--------cC--------HHHHHHHhcCCCcEEEeCCEEE
Confidence 35799999999999999999999 789999999876532 11 123344555 589998876653
Q ss_pred EE---------eeecc---c---ccccCEEEEeeCCCC
Q psy4525 91 QD---------ISLGD---L---TNAYHAVVLTYGADN 113 (388)
Q Consensus 91 ~~---------~~~~~---~---~~~yd~lvlAtG~~~ 113 (388)
.. +...+ + ...+|.|++|+|..|
T Consensus 416 ~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p 453 (521)
T 1hyu_A 416 EVKGDGSKVVGLEYRDRVSGDIHSVALAGIFVQIGLLP 453 (521)
T ss_dssp EEEECSSSEEEEEEEETTTCCEEEEECSEEEECCCEEE
T ss_pred EEEcCCCcEEEEEEEeCCCCceEEEEcCEEEECcCCCC
Confidence 21 22221 2 236899999999765
No 315
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=96.84 E-value=0.0078 Score=57.85 Aligned_cols=48 Identities=10% Similarity=0.063 Sum_probs=37.0
Q ss_pred ceeEEEEecC---cceeeeeCCCCceeEEEEccCccccCCceeEEecceEEEccccCCcc
Q psy4525 270 SKYFRPIFLR---SPTEFKLNDNGAITGINFANQQALVTEDTELIPSGIAFRSIGYQSRC 326 (388)
Q Consensus 270 ~~gv~~~~~~---~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~p~~ 326 (388)
+.|+++++++ .++++..+ ++.+.+++. .+++++.||.||+|+|.....
T Consensus 173 ~~Gv~i~~~t~~~~V~~i~~~-~~~v~gV~t--------~~G~~i~Ad~VV~AtG~~s~~ 223 (438)
T 3dje_A 173 RMGVKFVTGTPQGRVVTLIFE-NNDVKGAVT--------ADGKIWRAERTFLCAGASAGQ 223 (438)
T ss_dssp HTTCEEEESTTTTCEEEEEEE-TTEEEEEEE--------TTTEEEECSEEEECCGGGGGG
T ss_pred hcCCEEEeCCcCceEEEEEec-CCeEEEEEE--------CCCCEEECCEEEECCCCChhh
Confidence 5689999999 99999764 456766654 445689999999999976543
No 316
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=96.82 E-value=0.0027 Score=58.05 Aligned_cols=37 Identities=14% Similarity=0.146 Sum_probs=33.4
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCC
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVP 50 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~ 50 (388)
.+++|+|||||+.|+.+|..|++ .+.+|+++++.+.+
T Consensus 144 ~~k~vvViGgG~ig~E~A~~l~~--~g~~Vtlv~~~~~~ 180 (312)
T 4gcm_A 144 KNKRLFVIGGGDSAVEEGTFLTK--FADKVTIVHRRDEL 180 (312)
T ss_dssp TTCEEEEECCSHHHHHHHHHHTT--TCSEEEEECSSSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHh--cCCEEEEEeccccc
Confidence 35799999999999999999999 89999999988654
No 317
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=96.81 E-value=0.0022 Score=60.94 Aligned_cols=46 Identities=17% Similarity=0.031 Sum_probs=34.4
Q ss_pred ceeEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEecceEEEccccCCc
Q psy4525 270 SKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPSGIAFRSIGYQSR 325 (388)
Q Consensus 270 ~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~p~ 325 (388)
+.|+++++++.++++..+ ++.+..++. .++ ++.+|.||+|+|...+
T Consensus 186 ~~g~~i~~~~~v~~i~~~-~~~~~~v~~--------~~g-~~~a~~vV~a~G~~s~ 231 (405)
T 2gag_B 186 EMGVDIIQNCEVTGFIKD-GEKVTGVKT--------TRG-TIHAGKVALAGAGHSS 231 (405)
T ss_dssp HTTCEEECSCCEEEEEES-SSBEEEEEE--------TTC-CEEEEEEEECCGGGHH
T ss_pred HCCCEEEcCCeEEEEEEe-CCEEEEEEe--------CCc-eEECCEEEECCchhHH
Confidence 468999999999999864 355555543 233 6899999999998653
No 318
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=96.80 E-value=0.0046 Score=56.98 Aligned_cols=42 Identities=10% Similarity=-0.095 Sum_probs=29.4
Q ss_pred eEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEE-ecceEEEccccC
Q psy4525 272 YFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELI-PSGIAFRSIGYQ 323 (388)
Q Consensus 272 gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l-~~D~Vi~a~G~~ 323 (388)
++++++++.++++..++++ + .++. .+++.+ .+|.||.|+|..
T Consensus 119 g~~i~~~~~v~~i~~~~~~-~-~v~~--------~~g~~~~~a~~vV~a~g~~ 161 (336)
T 1yvv_A 119 DMPVSFSCRITEVFRGEEH-W-NLLD--------AEGQNHGPFSHVIIATPAP 161 (336)
T ss_dssp TCCEECSCCEEEEEECSSC-E-EEEE--------TTSCEEEEESEEEECSCHH
T ss_pred cCcEEecCEEEEEEEeCCE-E-EEEe--------CCCcCccccCEEEEcCCHH
Confidence 6789999999999875433 2 2332 333444 599999999965
No 319
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=96.79 E-value=0.0084 Score=59.69 Aligned_cols=48 Identities=13% Similarity=0.173 Sum_probs=37.2
Q ss_pred ce-eEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEecceEEEccccCCcc
Q psy4525 270 SK-YFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPSGIAFRSIGYQSRC 326 (388)
Q Consensus 270 ~~-gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~p~~ 326 (388)
+. |++++++ .++++..++++.+..+.+ .+++++.||.||.|+|..+..
T Consensus 206 ~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~--------~~G~~i~ad~vI~A~G~~S~~ 254 (550)
T 2e4g_A 206 EKLGVRHVED-RVEHVQRDANGNIESVRT--------ATGRVFDADLFVDCSGFRGLL 254 (550)
T ss_dssp HHSCCEEEEC-CEEEEEECTTSCEEEEEE--------TTSCEEECSEEEECCGGGCCC
T ss_pred hcCCcEEEEC-eEeEEEEcCCCCEEEEEE--------CCCCEEECCEEEECCCCchhh
Confidence 45 8999999 999998655566666654 334579999999999997755
No 320
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=96.76 E-value=0.0074 Score=59.91 Aligned_cols=48 Identities=10% Similarity=0.205 Sum_probs=36.5
Q ss_pred ceeEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEecceEEEccccCCcc
Q psy4525 270 SKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPSGIAFRSIGYQSRC 326 (388)
Q Consensus 270 ~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~p~~ 326 (388)
+.|+.++++ .++++..++++.+..+.+ .+++++.||.||.|+|.....
T Consensus 177 ~~gv~~~~~-~v~~i~~~~~g~~~~v~~--------~~g~~i~ad~vV~A~G~~s~~ 224 (538)
T 2aqj_A 177 ERGVNRVVD-EVVDVRLNNRGYISNLLT--------KEGRTLEADLFIDCSGMRGLL 224 (538)
T ss_dssp HTTCEEEEC-CEEEEEECTTSCEEEEEE--------TTSCEECCSEEEECCGGGCCC
T ss_pred HCCCEEEEe-eEeEEEEcCCCcEEEEEE--------CCCcEEEeCEEEECCCCchhh
Confidence 458999998 899988755566666654 234579999999999998765
No 321
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=96.76 E-value=0.0011 Score=66.11 Aligned_cols=37 Identities=24% Similarity=0.352 Sum_probs=33.3
Q ss_pred CCCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCC
Q psy4525 11 QLKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPV 49 (388)
Q Consensus 11 ~~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~ 49 (388)
...+|++|||+|++|+.+|.+|.+ .+.+|+|+|+.+.
T Consensus 5 ~~~~D~iIvG~G~aG~~~A~~L~~--~g~~VlvlE~g~~ 41 (546)
T 1kdg_A 5 ATPYDYIIVGAGPGGIIAADRLSE--AGKKVLLLERGGP 41 (546)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSCC
T ss_pred CCceeEEEECcCHHHHHHHHHHHh--CCCeEEEEeCCCC
Confidence 346899999999999999999999 8999999999864
No 322
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=96.76 E-value=0.0037 Score=59.26 Aligned_cols=51 Identities=4% Similarity=0.004 Sum_probs=34.5
Q ss_pred ceeEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEecceEEEccccCCcc
Q psy4525 270 SKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPSGIAFRSIGYQSRC 326 (388)
Q Consensus 270 ~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~p~~ 326 (388)
+.|+++++++.++++..++++.+ .+.+.. .++..++.+|.||.|.|.....
T Consensus 115 ~~g~~i~~~~~v~~i~~~~~~~~-~v~~~~-----~g~~~~~~a~~vV~AdG~~S~v 165 (394)
T 1k0i_A 115 ACGATTVYQAAEVRLHDLQGERP-YVTFER-----DGERLRLDCDYIAGCDGFHGIS 165 (394)
T ss_dssp HTTCEEESSCEEEEEECTTSSSC-EEEEEE-----TTEEEEEECSEEEECCCTTCST
T ss_pred hcCCeEEeceeEEEEEEecCCce-EEEEec-----CCcEEEEEeCEEEECCCCCcHH
Confidence 35899999999999976432322 344310 1222379999999999988654
No 323
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=96.72 E-value=0.001 Score=65.85 Aligned_cols=37 Identities=30% Similarity=0.333 Sum_probs=32.2
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCC
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPV 49 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~ 49 (388)
+.+|+||||+|+||+.+|.+|.+. ++.+|+|+|+.+.
T Consensus 16 ~~yD~IIVGsG~aG~v~A~rLse~-~~~~VLvLEaG~~ 52 (526)
T 3t37_A 16 PNCDIVIVGGGSAGSLLAARLSED-PDSRVLLIEAGEE 52 (526)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTS-TTSCEEEECSSBC
T ss_pred CCeeEEEECccHHHHHHHHHHHhC-CCCeEEEEcCCCC
Confidence 468999999999999999999863 6789999998854
No 324
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=96.72 E-value=0.0083 Score=55.78 Aligned_cols=55 Identities=9% Similarity=0.108 Sum_probs=37.8
Q ss_pred eeEEEEecCcceeeeeCCC----------------C--ceeEEEEcc------CccccCCceeEEecceEEEccccCCc
Q psy4525 271 KYFRPIFLRSPTEFKLNDN----------------G--AITGINFAN------QQALVTEDTELIPSGIAFRSIGYQSR 325 (388)
Q Consensus 271 ~gv~~~~~~~~~~i~~~~~----------------~--~v~~v~~~~------~~~~~~~~~~~l~~D~Vi~a~G~~p~ 325 (388)
.++++++++.++++..+++ + ++.++.... +......+..++.|+.||.|||....
T Consensus 174 ~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i~Ak~VV~ATG~~s~ 252 (344)
T 3jsk_A 174 PNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHHDDQSAMDPNTINAPVIISTTGHDGP 252 (344)
T ss_dssp TTEEEEETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHTTSSSSSCCBCEEEECSEEEECCCSSSS
T ss_pred CCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeeccCCcccccCceEEEcCEEEECCCCCch
Confidence 5899999999988875431 2 677776531 11111124578999999999998764
No 325
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=96.71 E-value=0.0033 Score=64.24 Aligned_cols=92 Identities=16% Similarity=0.147 Sum_probs=57.4
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCc-------------------------------------EEEEcCCCCCCCce
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQST-------------------------------------VDIYEKLPVPFGLV 54 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~-------------------------------------v~lie~~~~~gg~~ 54 (388)
..++|+|||||+.|+.+|..|.+ .|.+ |+++++.+..-
T Consensus 493 ~~~~VvVIGgG~~g~E~A~~l~~--~G~~vtv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~l--- 567 (671)
T 1ps9_A 493 VGNKVAIIGCGGIGFDTAMYLSQ--PGESTSQNIAGFCNEWGIDSSLQQAGGLSPQGMQIPRSPRQIVMLQRKASKP--- 567 (671)
T ss_dssp CCSEEEEECCHHHHHHHHHHHTC--CSSCGGGCHHHHHHHTTBCTTCCSGGGBCTTCCCCCCCSSEEEEECSSCSCT---
T ss_pred CCCeEEEECCChhHHHHHHHHHh--cCCCcccchhhhhhhhcccccccccccccccccccCCCCcEEEEEEecchhh---
Confidence 46899999999999999999997 5543 33444332110
Q ss_pred eeCCCCCCcchhHHHHHHHHhhcCCCcEEEceEEEEEE----eee-ccc---ccccCEEEEeeCCCCC
Q psy4525 55 RYGVAPDHPEVKNVINTFTKTGDNPRVNFYGNICLGQD----ISL-GDL---TNAYHAVVLTYGADND 114 (388)
Q Consensus 55 ~~g~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~~----~~~-~~~---~~~yd~lvlAtG~~~~ 114 (388)
. ..........+.+.+++.|++++.++.+... +.+ .++ ...+|.||+|+|..+.
T Consensus 568 -----~-~~l~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~v~~~~~G~~~~i~~D~Vi~a~G~~p~ 629 (671)
T 1ps9_A 568 -----G-QGLGKTTGWIHRTTLLSRGVKMIPGVSYQKIDDDGLHVVINGETQVLAVDNVVICAGQEPN 629 (671)
T ss_dssp -----T-TTSCTTTHHHHHHHHHHTTCEEECSCEEEEEETTEEEEEETTEEEEECCSEEEECCCEEEC
T ss_pred -----c-cccccccHHHHHHHHHhcCCEEEeCcEEEEEeCCeEEEecCCeEEEEeCCEEEECCCcccc
Confidence 0 0011122333455566789999988765321 222 222 2379999999997763
No 326
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=96.70 E-value=0.0044 Score=57.26 Aligned_cols=55 Identities=11% Similarity=0.175 Sum_probs=35.6
Q ss_pred eeEEEEecCcceeeeeCC--C-C--ceeEEEEccC------ccccCCceeEEec---------------ceEEEccccCC
Q psy4525 271 KYFRPIFLRSPTEFKLND--N-G--AITGINFANQ------QALVTEDTELIPS---------------GIAFRSIGYQS 324 (388)
Q Consensus 271 ~gv~~~~~~~~~~i~~~~--~-~--~v~~v~~~~~------~~~~~~~~~~l~~---------------D~Vi~a~G~~p 324 (388)
.|+++++++.++++..++ + + +|.++..... ......+..++.| |.||.|||..+
T Consensus 160 ~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~v~~~g~~~~~~d~~~I~A~G~~~~~~~~~~~~~~~VV~ATG~~~ 239 (326)
T 2gjc_A 160 PNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCMDPNVIELAGYKNDGTRDLSQKHGVILSTTGHDG 239 (326)
T ss_dssp TTEEEETTEEEEEEEECCCC-----CEEEEEEEEHHHHTC---CCCCCCEEEEESCCCSSSCCCSSTTCCEEEECCCCC-
T ss_pred cCcEEEecceeeeeeecccccCCCcEEEEEEecceeecccccceeccCceEEEEeeccccccccccccCCEEEECcCCCc
Confidence 589999999999998753 3 4 8888876411 0011224567888 88888888765
Q ss_pred c
Q psy4525 325 R 325 (388)
Q Consensus 325 ~ 325 (388)
.
T Consensus 240 ~ 240 (326)
T 2gjc_A 240 P 240 (326)
T ss_dssp -
T ss_pred h
Confidence 3
No 327
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=96.69 E-value=0.0093 Score=56.41 Aligned_cols=43 Identities=19% Similarity=0.224 Sum_probs=31.1
Q ss_pred EEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEecceEEEccccCCc
Q psy4525 274 RPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPSGIAFRSIGYQSR 325 (388)
Q Consensus 274 ~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~p~ 325 (388)
.++++..++.+...+++.+ .+.+ .+|+++.||+||-|-|.+..
T Consensus 125 ~v~~~~~v~~~~~~~~~~v-~v~~--------~dG~~~~adlvVgADG~~S~ 167 (412)
T 4hb9_A 125 TIQWNKTFVRYEHIENGGI-KIFF--------ADGSHENVDVLVGADGSNSK 167 (412)
T ss_dssp TEECSCCEEEEEECTTSCE-EEEE--------TTSCEEEESEEEECCCTTCH
T ss_pred eEEEEEEEEeeeEcCCCeE-EEEE--------CCCCEEEeeEEEECCCCCcc
Confidence 3678899998876555544 3443 45568999999999998753
No 328
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=96.69 E-value=0.0027 Score=61.72 Aligned_cols=37 Identities=16% Similarity=0.337 Sum_probs=32.2
Q ss_pred CCCCcEEEECccHHHHHHHHHHHhhCCCCc-EEEEcCCCC
Q psy4525 11 QLKPNVCIVGSGPAGFYCAQQILKLLPQST-VDIYEKLPV 49 (388)
Q Consensus 11 ~~~~~vvIIGaG~aGl~aA~~l~~~~~g~~-v~lie~~~~ 49 (388)
...++|+|||||..|+.+|..+.+ .|.+ |+++++.+.
T Consensus 262 ~~gk~VvVIGgG~~a~d~A~~~~r--~Ga~~Vtiv~r~~~ 299 (456)
T 2vdc_G 262 AAGKHVVVLGGGDTAMDCVRTAIR--QGATSVKCLYRRDR 299 (456)
T ss_dssp CCCSEEEEECSSHHHHHHHHHHHH--TTCSEEEEECSSCS
T ss_pred cCCCEEEEECCChhHHHHHHHHHH--cCCCEEEEEEeCCc
Confidence 346899999999999999999998 7874 999998754
No 329
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=96.65 E-value=0.009 Score=58.08 Aligned_cols=34 Identities=21% Similarity=0.332 Sum_probs=31.1
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCC
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLP 48 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~ 48 (388)
.++|+|+|+|-.|.+.|..|.. .|.+|+++|+++
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~--~~~~v~vId~d~ 36 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVG--ENNDITIVDKDG 36 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCS--TTEEEEEEESCH
T ss_pred cCEEEEECCCHHHHHHHHHHHH--CCCCEEEEECCH
Confidence 4589999999999999999998 899999999864
No 330
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=96.61 E-value=0.0086 Score=59.34 Aligned_cols=64 Identities=16% Similarity=0.145 Sum_probs=41.9
Q ss_pred hhHHHHHHHhhCCCCCCCCCCceeEEEEecCcceeeeeCCCCce--eEEEEccCccccCCceeEEecceEEEccccCCc
Q psy4525 249 RKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTEFKLNDNGAI--TGINFANQQALVTEDTELIPSGIAFRSIGYQSR 325 (388)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~v--~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~p~ 325 (388)
+..+...|.+.+. +.|+++++++.++.+..++++.+ ..+.+.++ +...++.||.||.|.|....
T Consensus 119 ~~~l~~~L~~~a~--------~~gv~i~~~~~v~~i~~~~~~~~~~v~v~~~~~-----~~~~~i~a~~vV~AdG~~S~ 184 (535)
T 3ihg_A 119 QDKLEPILLAQAR--------KHGGAIRFGTRLLSFRQHDDDAGAGVTARLAGP-----DGEYDLRAGYLVGADGNRSL 184 (535)
T ss_dssp HHHHHHHHHHHHH--------HTTCEEESSCEEEEEEEECGGGCSEEEEEEEET-----TEEEEEEEEEEEECCCTTCH
T ss_pred HHHHHHHHHHHHH--------hCCCEEEeCCEEEEEEECCCCccccEEEEEEcC-----CCeEEEEeCEEEECCCCcch
Confidence 4555555555442 45899999999999987544222 22333221 11468999999999998763
No 331
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=96.61 E-value=0.0018 Score=66.83 Aligned_cols=91 Identities=13% Similarity=0.090 Sum_probs=61.6
Q ss_pred CCCcEEEEC--ccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCCCCCCcchhHHHHHHHHhhcCCCcEEEceEEE
Q psy4525 12 LKPNVCIVG--SGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTKTGDNPRVNFYGNICL 89 (388)
Q Consensus 12 ~~~~vvIIG--aG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v 89 (388)
..++|+||| +|+.|+.+|..|++ .|.+|+++++.+ +.... .. +. . ...+.+.+++.|++++.++.+
T Consensus 527 ~gk~VvVIG~GgG~~g~e~A~~l~~--~G~~Vtlv~~~~-l~~~~--~~-~~--~----~~~~~~~l~~~GV~i~~~~~v 594 (729)
T 1o94_A 527 IGKRVVILNADTYFMAPSLAEKLAT--AGHEVTIVSGVH-LANYM--HF-TL--E----YPNMMRRLHELHVEELGDHFC 594 (729)
T ss_dssp CCSEEEEEECCCSSHHHHHHHHHHH--TTCEEEEEESSC-TTHHH--HH-TT--C----HHHHHHHHHHTTCEEECSEEE
T ss_pred CCCeEEEEcCCCCchHHHHHHHHHH--cCCEEEEEeccc-ccccc--cc-cc--c----HHHHHHHHHhCCCEEEcCcEE
Confidence 457999999 99999999999999 899999999886 42110 00 11 1 233445566679999988765
Q ss_pred EEE------eee---cc-cc------------------cccCEEEEeeCCCCC
Q psy4525 90 GQD------ISL---GD-LT------------------NAYHAVVLTYGADND 114 (388)
Q Consensus 90 ~~~------~~~---~~-~~------------------~~yd~lvlAtG~~~~ 114 (388)
... +.. +. .. ..+|.||+|+|..+.
T Consensus 595 ~~i~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~~p~ 647 (729)
T 1o94_A 595 SRIEPGRMEIYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGRHSE 647 (729)
T ss_dssp EEEETTEEEEEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCEEEC
T ss_pred EEEECCeEEEEEecCCceEEecccccccccccCCcceeeeCCEEEECCCCCCC
Confidence 321 111 11 11 468999999997663
No 332
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=96.60 E-value=0.011 Score=60.53 Aligned_cols=60 Identities=7% Similarity=0.041 Sum_probs=39.5
Q ss_pred ceeEEEEecCcceeeeeCCCCceeEEEEccCccccCCcee-EEecceEEEccccCCccCC--CCCcccCCCcc
Q psy4525 270 SKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTE-LIPSGIAFRSIGYQSRCVD--SDIPFNEKSCT 339 (388)
Q Consensus 270 ~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~-~l~~D~Vi~a~G~~p~~~~--~~l~~~~~~gi 339 (388)
+.|+++++++.++++..+++ .+ .++ +.++. ++.||.||+|+|.....+. .++++...+|.
T Consensus 424 ~~Gv~i~~~t~V~~l~~~~~-~v-~V~--------t~~G~~~i~Ad~VVlAtG~~s~~l~~~~~lpl~p~rGq 486 (689)
T 3pvc_A 424 QNGMTCHYQHELQRLKRIDS-QW-QLT--------FGQSQAAKHHATVILATGHRLPEWEQTHHLPLSAVRGQ 486 (689)
T ss_dssp HTTCEEEESCCEEEEEECSS-SE-EEE--------EC-CCCCEEESEEEECCGGGTTCSTTTTTSCCEEEEEE
T ss_pred hCCCEEEeCCeEeEEEEeCC-eE-EEE--------eCCCcEEEECCEEEECCCcchhccccccCCccccccCc
Confidence 46899999999999987643 33 333 33444 6899999999998755432 23444433443
No 333
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=96.56 E-value=0.015 Score=54.58 Aligned_cols=46 Identities=13% Similarity=0.210 Sum_probs=35.0
Q ss_pred ceeEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEecceEEEccccCCc
Q psy4525 270 SKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPSGIAFRSIGYQSR 325 (388)
Q Consensus 270 ~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~p~ 325 (388)
+.|+++++++.++++..++ +.+.+++. .++ ++.||.||+|+|....
T Consensus 161 ~~Gv~i~~~~~v~~i~~~~-~~v~gv~~--------~~g-~i~a~~VV~A~G~~s~ 206 (382)
T 1y56_B 161 EYGAKLLEYTEVKGFLIEN-NEIKGVKT--------NKG-IIKTGIVVNATNAWAN 206 (382)
T ss_dssp HTTCEEECSCCEEEEEESS-SBEEEEEE--------TTE-EEECSEEEECCGGGHH
T ss_pred HCCCEEECCceEEEEEEEC-CEEEEEEE--------CCc-EEECCEEEECcchhHH
Confidence 5689999999999998653 55655543 334 6999999999998653
No 334
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=96.56 E-value=0.014 Score=57.33 Aligned_cols=138 Identities=9% Similarity=0.061 Sum_probs=76.8
Q ss_pred CCeEEEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecCccccc-----CCHHHHHHHhcCCC-
Q psy4525 152 CEEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRGALQVA-----FTIKEFREMTKLPH- 225 (388)
Q Consensus 152 ~~~vvVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~~~~~~-----~~~~el~~l~~~~~- 225 (388)
..+|+|||+|.+|+-+|..|+ +.|. +|+++.|.+..... +.+.-++-+..+-.
T Consensus 12 ~~dVlIVGaGpaGl~~A~~La--------------------~~G~-~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~ 70 (499)
T 2qa2_A 12 DASVIVVGAGPAGLMLAGELR--------------------LGGV-DVMVLEQLPQRTGESRGLGFTARTMEVFDQRGIL 70 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHH--------------------HTTC-CEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCG
T ss_pred CCCEEEECcCHHHHHHHHHHH--------------------HCCC-CEEEEECCCCCCCCCceeEECHHHHHHHHHCCCH
Confidence 458999999999999999886 3554 59999987543221 22222222211100
Q ss_pred --c------e-EEecccccc--cchh-hhccccchhhHHHHHHHhhCCCCCCCCCCceeEEEEecCcceeeeeCCCCcee
Q psy4525 226 --V------Q-TVFRNEQLC--GVHE-ASATLARPRKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTEFKLNDNGAIT 293 (388)
Q Consensus 226 --~------~-~~~~~~~~~--~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~v~ 293 (388)
+ . ..+....++ .+.. .+....-.+..+.+.|...+. +.|+++++++.++.+..+++ .+.
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~--------~~gv~v~~~~~v~~i~~~~~-~v~ 141 (499)
T 2qa2_A 71 PAFGPVETSTQGHFGGRPVDFGVLEGAHYGVKAVPQSTTESVLEEWAL--------GRGAELLRGHTVRALTDEGD-HVV 141 (499)
T ss_dssp GGGCSCCEESEEEETTEEEEGGGSTTCCCEEEEEEHHHHHHHHHHHHH--------HTTCEEEESCEEEEEEECSS-CEE
T ss_pred HHHHhccccccceecceecccccCCCCCCceEecCHHHHHHHHHHHHH--------hCCCEEEcCCEEEEEEEeCC-EEE
Confidence 0 0 000000000 0000 000111124555566655432 35799999999999987553 333
Q ss_pred EEEEccCccccCCceeEEecceEEEccccCCc
Q psy4525 294 GINFANQQALVTEDTELIPSGIAFRSIGYQSR 325 (388)
Q Consensus 294 ~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~p~ 325 (388)
+.+.++ ++ .+++.||.||.|.|.+..
T Consensus 142 -v~~~~~----~g-~~~~~a~~vVgADG~~S~ 167 (499)
T 2qa2_A 142 -VEVEGP----DG-PRSLTTRYVVGCDGGRST 167 (499)
T ss_dssp -EEEECS----SC-EEEEEEEEEEECCCTTCH
T ss_pred -EEEEcC----CC-cEEEEeCEEEEccCcccH
Confidence 444332 12 357999999999998754
No 335
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=96.54 E-value=0.0019 Score=64.37 Aligned_cols=49 Identities=24% Similarity=0.285 Sum_probs=38.2
Q ss_pred CccccccccCCCCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCC
Q psy4525 1 MMKRVYSTISQLKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVP 50 (388)
Q Consensus 1 ~~~~~~~~~~~~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~ 50 (388)
||...++......+|++|||+|++|+.+|..|.+. ++.+|+++|+....
T Consensus 1 ~~~~~~~~~~~~~~d~~ivG~G~~G~~~a~~l~~~-~~~~v~~~e~g~~~ 49 (546)
T 2jbv_A 1 MHIDNIENLSDREFDYIVVGGGSAGAAVAARLSED-PAVSVALVEAGPDD 49 (546)
T ss_dssp CEESCGGGCCCCEEEEEEECCSHHHHHHHHHHTTS-TTSCEEEECSSCCC
T ss_pred CccccccccccCcCCEEEECcCHHHHHHHHHHHhC-CCCCEEEEecCCcC
Confidence 45544444433568999999999999999999982 38999999998553
No 336
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=96.54 E-value=0.0095 Score=56.80 Aligned_cols=48 Identities=8% Similarity=-0.048 Sum_probs=31.4
Q ss_pred EEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEecceEEEccccCCcc
Q psy4525 273 FRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPSGIAFRSIGYQSRC 326 (388)
Q Consensus 273 v~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~p~~ 326 (388)
+.+++++.++++.. +++ +. +.+.+. ..++.+++.||.||.|.|.....
T Consensus 124 ~~v~~~~~v~~i~~-~~~-v~-v~~~~~---~~g~~~~~~ad~vV~AdG~~S~v 171 (410)
T 3c96_A 124 QAVRTGLGVERIEE-RDG-RV-LIGARD---GHGKPQALGADVLVGADGIHSAV 171 (410)
T ss_dssp TSEEESEEEEEEEE-ETT-EE-EEEEEE---TTSCEEEEEESEEEECCCTTCHH
T ss_pred cEEEECCEEEEEec-CCc-cE-EEEecC---CCCCceEEecCEEEECCCccchh
Confidence 57889999998876 333 32 333210 01233679999999999987643
No 337
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=96.53 E-value=0.013 Score=54.99 Aligned_cols=45 Identities=11% Similarity=-0.127 Sum_probs=33.7
Q ss_pred ceeEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEecceEEEccccCCc
Q psy4525 270 SKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPSGIAFRSIGYQSR 325 (388)
Q Consensus 270 ~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~p~ 325 (388)
+.|+++++++.++++..++ +.+ .+. +.++ ++.||.||+|+|....
T Consensus 176 ~~g~~i~~~~~v~~i~~~~-~~~-~v~--------~~~g-~~~a~~vV~A~G~~s~ 220 (382)
T 1ryi_A 176 MLGAEIFEHTPVLHVERDG-EAL-FIK--------TPSG-DVWANHVVVASGVWSG 220 (382)
T ss_dssp HTTCEEETTCCCCEEECSS-SSE-EEE--------ETTE-EEEEEEEEECCGGGTH
T ss_pred HCCCEEEcCCcEEEEEEEC-CEE-EEE--------cCCc-eEEcCEEEECCChhHH
Confidence 4689999999999997643 444 443 2334 7999999999998654
No 338
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=96.51 E-value=0.015 Score=57.21 Aligned_cols=137 Identities=11% Similarity=0.040 Sum_probs=76.0
Q ss_pred CCeEEEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecCccccc-----CCHHHHHHHhcCCCc
Q psy4525 152 CEEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRGALQVA-----FTIKEFREMTKLPHV 226 (388)
Q Consensus 152 ~~~vvVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~~~~~~-----~~~~el~~l~~~~~~ 226 (388)
..+|+|||+|.+|+-+|..|+ +.|. +|++++|.+..... +.+.-++-+..+ ++
T Consensus 11 ~~dVlIVGaGpaGl~~A~~La--------------------~~G~-~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~l-Gl 68 (500)
T 2qa1_A 11 DAAVIVVGAGPAGMMLAGELR--------------------LAGV-EVVVLERLVERTGESRGLGFTARTMEVFDQR-GI 68 (500)
T ss_dssp BCSEEEECCSHHHHHHHHHHH--------------------HTTC-CEEEEESCCC-CCCCCSEEECHHHHHHHHTT-TC
T ss_pred CCCEEEECcCHHHHHHHHHHH--------------------HCCC-CEEEEeCCCCCCCCCCcceECHHHHHHHHHC-CC
Confidence 357999999999999999886 3554 59999987643211 223222222211 11
Q ss_pred e-----------EEecccccc--cchh-hhccccchhhHHHHHHHhhCCCCCCCCCCceeEEEEecCcceeeeeCCCCce
Q psy4525 227 Q-----------TVFRNEQLC--GVHE-ASATLARPRKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTEFKLNDNGAI 292 (388)
Q Consensus 227 ~-----------~~~~~~~~~--~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~v 292 (388)
. ..+....+. .+.. .+....-.+..+.+.|...+. +.|+++++++.++.+..+++ .+
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~--------~~gv~v~~~~~v~~i~~~~~-~v 139 (500)
T 2qa1_A 69 LPRFGEVETSTQGHFGGLPIDFGVLEGAWQAAKTVPQSVTETHLEQWAT--------GLGADIRRGHEVLSLTDDGA-GV 139 (500)
T ss_dssp GGGGCSCCBCCEEEETTEEEEGGGSTTGGGCEEEEEHHHHHHHHHHHHH--------HTTCEEEETCEEEEEEEETT-EE
T ss_pred HHHHHhccccccccccceecccccCCCCCCceeecCHHHHHHHHHHHHH--------HCCCEEECCcEEEEEEEcCC-eE
Confidence 0 000000000 0000 000111124555555555432 35799999999999986543 33
Q ss_pred eEEEEccCccccCCceeEEecceEEEccccCCc
Q psy4525 293 TGINFANQQALVTEDTELIPSGIAFRSIGYQSR 325 (388)
Q Consensus 293 ~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~p~ 325 (388)
. +++.++ .+ .+++.+|.||.|.|.+..
T Consensus 140 ~-v~~~~~----~g-~~~~~a~~vVgADG~~S~ 166 (500)
T 2qa1_A 140 T-VEVRGP----EG-KHTLRAAYLVGCDGGRSS 166 (500)
T ss_dssp E-EEEEET----TE-EEEEEESEEEECCCTTCH
T ss_pred E-EEEEcC----CC-CEEEEeCEEEECCCcchH
Confidence 2 444332 12 357999999999998754
No 339
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=96.44 E-value=0.0055 Score=57.41 Aligned_cols=58 Identities=16% Similarity=0.155 Sum_probs=37.4
Q ss_pred ceeEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEecceEEEccccCCccCCCCCcccCCCc
Q psy4525 270 SKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPSGIAFRSIGYQSRCVDSDIPFNEKSC 338 (388)
Q Consensus 270 ~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~p~~~~~~l~~~~~~g 338 (388)
+.|+++++++.++++..+++ .+ .++ +.++ ++.||.||+|+|.....+...+++.+.+|
T Consensus 161 ~~G~~i~~~~~V~~i~~~~~-~~-~v~--------~~~g-~~~a~~vV~a~G~~s~~l~~~l~~~p~rg 218 (372)
T 2uzz_A 161 EAGCAQLFNCPVTAIRHDDD-GV-TIE--------TADG-EYQAKKAIVCAGTWVKDLLPELPVQPVRK 218 (372)
T ss_dssp HTTCEEECSCCEEEEEECSS-SE-EEE--------ESSC-EEEEEEEEECCGGGGGGTSTTCCCEEEEC
T ss_pred HCCCEEEcCCEEEEEEEcCC-EE-EEE--------ECCC-eEEcCEEEEcCCccHHhhccccCceEEEE
Confidence 46899999999999986543 32 232 2333 49999999999976544432344443334
No 340
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=96.43 E-value=0.01 Score=55.61 Aligned_cols=44 Identities=11% Similarity=0.086 Sum_probs=32.3
Q ss_pred ceeEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEecceEEEccccCC
Q psy4525 270 SKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPSGIAFRSIGYQS 324 (388)
Q Consensus 270 ~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~p 324 (388)
+.|+++++++.++++..++ +. ..++ +.++ ++.||.||+|+|...
T Consensus 166 ~~Gv~i~~~~~V~~i~~~~-~~-~~V~--------t~~g-~i~a~~VV~A~G~~s 209 (381)
T 3nyc_A 166 RNQGQVLCNHEALEIRRVD-GA-WEVR--------CDAG-SYRAAVLVNAAGAWC 209 (381)
T ss_dssp HTTCEEESSCCCCEEEEET-TE-EEEE--------CSSE-EEEESEEEECCGGGH
T ss_pred HCCCEEEcCCEEEEEEEeC-Ce-EEEE--------eCCC-EEEcCEEEECCChhH
Confidence 4589999999999997643 32 2332 3444 799999999999754
No 341
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=96.42 E-value=0.015 Score=53.89 Aligned_cols=40 Identities=10% Similarity=0.051 Sum_probs=29.4
Q ss_pred eEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEecceEEEccc
Q psy4525 272 YFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPSGIAFRSIG 321 (388)
Q Consensus 272 gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G 321 (388)
|+++++++.++++..+++ .+. +.. .+++++.+|.||+|+.
T Consensus 123 g~~i~~~~~V~~i~~~~~-~~~-v~~--------~~g~~~~ad~vV~A~p 162 (342)
T 3qj4_A 123 GAEVYFRHRVTQINLRDD-KWE-VSK--------QTGSPEQFDLIVLTMP 162 (342)
T ss_dssp TCEEESSCCEEEEEECSS-SEE-EEE--------SSSCCEEESEEEECSC
T ss_pred CCEEEeCCEEEEEEEcCC-EEE-EEE--------CCCCEEEcCEEEECCC
Confidence 789999999999987543 332 332 3344589999999997
No 342
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=96.41 E-value=0.022 Score=57.38 Aligned_cols=46 Identities=11% Similarity=0.101 Sum_probs=32.5
Q ss_pred eeEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEecceEEEccccCCcc
Q psy4525 271 KYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPSGIAFRSIGYQSRC 326 (388)
Q Consensus 271 ~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~p~~ 326 (388)
.|+++. ...++.+..+ ++.+.++.. .++.++.||.||+|||..++.
T Consensus 131 ~GV~I~-~~~V~~L~~d-~g~V~GV~t--------~~G~~i~Ad~VVLATG~~s~~ 176 (641)
T 3cp8_A 131 PNIDLL-QDTVIGVSAN-SGKFSSVTV--------RSGRAIQAKAAILACGTFLNG 176 (641)
T ss_dssp TTEEEE-ECCEEEEEEE-TTEEEEEEE--------TTSCEEEEEEEEECCTTCBTC
T ss_pred CCCEEE-eeEEEEEEec-CCEEEEEEE--------CCCcEEEeCEEEECcCCCCCc
Confidence 478884 5578877653 356666654 334589999999999987653
No 343
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=96.34 E-value=0.0029 Score=63.34 Aligned_cols=53 Identities=9% Similarity=0.093 Sum_probs=39.8
Q ss_pred CceeEEEEecCcceeeeeCC---CCceeEEEEccCccccCCceeEEecc-eEEEccccCCc
Q psy4525 269 CSKYFRPIFLRSPTEFKLND---NGAITGINFANQQALVTEDTELIPSG-IAFRSIGYQSR 325 (388)
Q Consensus 269 ~~~gv~~~~~~~~~~i~~~~---~~~v~~v~~~~~~~~~~~~~~~l~~D-~Vi~a~G~~p~ 325 (388)
.+.++++++++.++++..+. ++++.+|++.+. .+...++.|. .||+|+|.-..
T Consensus 238 ~r~NL~V~t~a~V~rIl~d~~~~~~ra~GV~~~~~----~G~~~~v~A~kEVILsAGa~~S 294 (583)
T 3qvp_A 238 QRPNLQVLTGQYVGKVLLSQNGTTPRAVGVEFGTH----KGNTHNVYAKHEVLLAAGSAVS 294 (583)
T ss_dssp TCTTEEEECSCEEEEEEEECSSSSCEEEEEEEESS----TTCEEEEEEEEEEEECSCTTTH
T ss_pred cCCCcEEEcCCEEEEEEeccCCCCCEEEEEEEEec----CCcEEEEEECCEEEEeCCccCC
Confidence 36789999999999998753 578899987521 2445677886 79999997643
No 344
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=96.26 E-value=0.013 Score=57.56 Aligned_cols=114 Identities=13% Similarity=0.041 Sum_probs=65.2
Q ss_pred CeEEEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecCcccccCCHHHHHHHhcCCCceEEecc
Q psy4525 153 EEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRGALQVAFTIKEFREMTKLPHVQTVFRN 232 (388)
Q Consensus 153 ~~vvVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~~~~~~~~~~el~~l~~~~~~~~~~~~ 232 (388)
.+|+|||+|..|+.+|..|+ +. .+|+++.+.+.+--. +..... .+.
T Consensus 109 ~dVvIIGgG~aGl~aA~~L~--------------------~~--~~V~vie~~~~~GG~--------~~~~~~---~~~- 154 (493)
T 1y56_A 109 VDVAIIGGGPAGIGAALELQ--------------------QY--LTVALIEERGWLGGD--------MWLKGI---KQE- 154 (493)
T ss_dssp ESCCEECCSHHHHHHHHHHT--------------------TT--CCEEEECTTSSSSCS--------GGGTCS---EET-
T ss_pred CCEEEECccHHHHHHHHHHH--------------------hc--CCEEEEeCCCCCCCe--------eecccc---ccC-
Confidence 47999999999999999886 23 579999987643111 000000 000
Q ss_pred cccccchhhhccccchhhHHHHHHHhhCCCCCCCCCCceeEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEe
Q psy4525 233 EQLCGVHEASATLARPRKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIP 312 (388)
Q Consensus 233 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~ 312 (388)
.++.....+...+... . ..+++++++..+..+..+. ..+...... .++...+.
T Consensus 155 -----------g~~~~~~~~~~~l~~~--------l-~~~v~~~~~~~v~~i~~~~-~~~~~~~~~------~~~~~~~~ 207 (493)
T 1y56_A 155 -----------GFNKDSRKVVEELVGK--------L-NENTKIYLETSALGVFDKG-EYFLVPVVR------GDKLIEIL 207 (493)
T ss_dssp -----------TTTEEHHHHHHHHHHT--------C-CTTEEEETTEEECCCEECS-SSEEEEEEE------TTEEEEEE
T ss_pred -----------CCCCCHHHHHHHHHHH--------H-hcCCEEEcCCEEEEEEcCC-cEEEEEEec------CCeEEEEE
Confidence 0000111222222221 1 3578888888888877543 222221111 22334799
Q ss_pred cceEEEccccCCccC
Q psy4525 313 SGIAFRSIGYQSRCV 327 (388)
Q Consensus 313 ~D~Vi~a~G~~p~~~ 327 (388)
+|.+|+|||..|..+
T Consensus 208 ~d~lvlAtGa~~~~~ 222 (493)
T 1y56_A 208 AKRVVLATGAIDSTM 222 (493)
T ss_dssp ESCEEECCCEEECCC
T ss_pred CCEEEECCCCCccCC
Confidence 999999999987654
No 345
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=96.23 E-value=0.011 Score=58.52 Aligned_cols=47 Identities=15% Similarity=0.054 Sum_probs=35.4
Q ss_pred eeEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEecceEEEccccCCcc
Q psy4525 271 KYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPSGIAFRSIGYQSRC 326 (388)
Q Consensus 271 ~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~p~~ 326 (388)
.|++++++ .++++..++++.+..+.+ .++.++.||.||.|+|.....
T Consensus 189 ~Gv~i~~~-~v~~i~~~~~g~~~~v~~--------~~g~~i~ad~vV~AdG~~S~~ 235 (526)
T 2pyx_A 189 LGVTHIRD-HVSQIINNQHGDIEKLIT--------KQNGEISGQLFIDCTGAKSLL 235 (526)
T ss_dssp SCCEEEEC-CEEEEEECTTSCEEEEEE--------SSSCEEECSEEEECSGGGCCC
T ss_pred CCCEEEEe-EEEEEEecCCCcEEEEEE--------CCCCEEEcCEEEECCCcchHH
Confidence 68999999 699987655566656654 233459999999999998755
No 346
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=96.18 E-value=0.0039 Score=61.46 Aligned_cols=37 Identities=11% Similarity=-0.002 Sum_probs=33.5
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCC
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVP 50 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~ 50 (388)
..++++|||+|++|+.+|..|.+ .+.+|+|+|+....
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~--~~~~v~~~e~~~~~ 40 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGE--AGVQTLMLEMGQLW 40 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH--TTCCEEEEESSCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHh--CCCcEEEEeCCCCC
Confidence 34799999999999999999999 89999999998654
No 347
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=96.18 E-value=0.005 Score=65.59 Aligned_cols=80 Identities=5% Similarity=0.062 Sum_probs=58.0
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCCCCCCcchhHHHHHHHHhhcCCCcEEEceEEEEE-
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTKTGDNPRVNFYGNICLGQ- 91 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~- 91 (388)
.++|+|||+|+.|+.+|..|.+ .|.+|+|+++.+.+. + . .+.+++.|++++.++.+..
T Consensus 284 gk~vvViGgG~~g~E~A~~L~~--~G~~Vtvv~~~~~~~--------~-----~------~~~l~~~GV~v~~~~~v~~i 342 (965)
T 2gag_A 284 GARIAVATTNDSAYELVRELAA--TGGVVAVIDARSSIS--------A-----A------AAQAVADGVQVISGSVVVDT 342 (965)
T ss_dssp CSSEEEEESSTTHHHHHHHHGG--GTCCSEEEESCSSCC--------H-----H------HHHHHHTTCCEEETEEEEEE
T ss_pred CCeEEEEcCCHHHHHHHHHHHH--cCCcEEEEECCCccc--------h-----h------HHHHHhCCeEEEeCCEeEEE
Confidence 4799999999999999999999 799999999885531 1 1 2345567888887765421
Q ss_pred ---------Eeeecc-------c---ccccCEEEEeeCCCC
Q psy4525 92 ---------DISLGD-------L---TNAYHAVVLTYGADN 113 (388)
Q Consensus 92 ---------~~~~~~-------~---~~~yd~lvlAtG~~~ 113 (388)
.+.+.+ + ...+|.||+|+|..|
T Consensus 343 ~~~~~~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~~P 383 (965)
T 2gag_A 343 EADENGELSAIVVAELDEARELGGTQRFEADVLAVAGGFNP 383 (965)
T ss_dssp EECTTSCEEEEEEEEECTTCCEEEEEEEECSEEEEECCEEE
T ss_pred eccCCCCEEEEEEEeccccCCCCceEEEEcCEEEECCCcCc
Confidence 122221 2 237999999999766
No 348
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=96.17 E-value=0.0056 Score=61.71 Aligned_cols=42 Identities=14% Similarity=0.015 Sum_probs=39.1
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCcee
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVR 55 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~ 55 (388)
..+|++|||+|..|..+|..|.+ .|.+|.++|++++.||.|.
T Consensus 7 ~~~D~~i~GtGl~~~~~a~~~~~--~g~~vl~id~~~~~gg~~~ 48 (650)
T 1vg0_A 7 SDFDVIVIGTGLPESIIAAACSR--SGQRVLHVDSRSYYGGNWA 48 (650)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSSCGGGC
T ss_pred CcCCEEEECCcHHHHHHHHHHHh--CCCEEEEEcCCCcccCccc
Confidence 36899999999999999999999 8999999999999999863
No 349
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=96.17 E-value=0.0034 Score=62.84 Aligned_cols=36 Identities=31% Similarity=0.219 Sum_probs=32.0
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCC-CcEEEEcCCCC
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQ-STVDIYEKLPV 49 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g-~~v~lie~~~~ 49 (388)
..+|+||||||.||+.+|.+|.+ .+ .+|+|+|+.+.
T Consensus 5 ~~yDyIVVGgG~AG~v~A~rLse--~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTVAGRLAE--NPNVTVLIVEAGIG 41 (577)
T ss_dssp CEEEEEEESCSHHHHHHHHHHTT--STTSCEEEECSSCS
T ss_pred CcccEEEECCcHHHHHHHHHHHh--CCCCcEEEEecCCC
Confidence 35899999999999999999998 55 79999999854
No 350
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=96.16 E-value=0.014 Score=58.19 Aligned_cols=51 Identities=14% Similarity=0.171 Sum_probs=39.3
Q ss_pred ceeEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEecceEEEccccCC
Q psy4525 270 SKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPSGIAFRSIGYQS 324 (388)
Q Consensus 270 ~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~p 324 (388)
+.|+.+++++.++++..+ ++.+.++++.+. .++++.++.||.||.|+|.-.
T Consensus 182 ~~G~~i~~~~~V~~l~~~-~g~v~gV~~~d~---~tg~~~~i~A~~VV~AaG~~s 232 (561)
T 3da1_A 182 ARGAVALNYMKVESFIYD-QGKVVGVVAKDR---LTDTTHTIYAKKVVNAAGPWV 232 (561)
T ss_dssp HTTCEEEESEEEEEEEEE-TTEEEEEEEEET---TTCCEEEEEEEEEEECCGGGH
T ss_pred HcCCEEEcCCEEEEEEEc-CCeEEEEEEEEc---CCCceEEEECCEEEECCCcch
Confidence 568999999999999874 467777776532 145567899999999999754
No 351
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=96.15 E-value=0.0053 Score=60.45 Aligned_cols=48 Identities=13% Similarity=0.241 Sum_probs=36.7
Q ss_pred ceeEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEecceEEEccccCCcc
Q psy4525 270 SKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPSGIAFRSIGYQSRC 326 (388)
Q Consensus 270 ~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~p~~ 326 (388)
+.|++++++ .++++..++++.+..+++ .+++++.+|.||.|+|.....
T Consensus 185 ~~gv~~~~~-~v~~i~~~~~~~~~~v~~--------~~g~~~~ad~vV~A~G~~S~~ 232 (511)
T 2weu_A 185 ARGVRHVVD-DVQHVGQDERGWISGVHT--------KQHGEISGDLFVDCTGFRGLL 232 (511)
T ss_dssp HTTCEEEEC-CEEEEEECTTSCEEEEEE--------SSSCEEECSEEEECCGGGCCC
T ss_pred HCCCEEEEC-eEeEEEEcCCCCEEEEEE--------CCCCEEEcCEEEECCCcchHH
Confidence 458999999 899988755566666654 234579999999999997654
No 352
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=96.15 E-value=0.013 Score=62.87 Aligned_cols=34 Identities=24% Similarity=0.387 Sum_probs=30.9
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCC-cEEEEcCCC
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQS-TVDIYEKLP 48 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~-~v~lie~~~ 48 (388)
.++|+|||||..|+.+|..+.+ .|. +|+++++.+
T Consensus 332 ~~~VvVIGgG~~g~e~A~~~~~--~G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 332 RGAVIVLGAGDTAFDCATSALR--CGARRVFLVFRKG 366 (1025)
T ss_dssp CSEEEEECSSHHHHHHHHHHHH--TTCSEEEEECSSC
T ss_pred CCcEEEECCChHHHHHHHHHHH--cCCCEEEEEEecC
Confidence 5699999999999999999999 786 899999875
No 353
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=96.14 E-value=0.024 Score=54.98 Aligned_cols=38 Identities=16% Similarity=0.153 Sum_probs=30.7
Q ss_pred CCCcEEEECccHHHHHHHHHHHhh------------------CCC-CcEEEEcCCCC
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKL------------------LPQ-STVDIYEKLPV 49 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~------------------~~g-~~v~lie~~~~ 49 (388)
..++|+|||+|+.|+.+|..|.+. ..+ .+|+++++.+.
T Consensus 146 ~~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~ 202 (456)
T 1lqt_A 146 SGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGP 202 (456)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCG
T ss_pred CCCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCCh
Confidence 458999999999999999999872 024 48999998754
No 354
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=96.07 E-value=0.01 Score=55.76 Aligned_cols=46 Identities=11% Similarity=0.144 Sum_probs=32.9
Q ss_pred ceeEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEecceEEEccccCCcc
Q psy4525 270 SKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPSGIAFRSIGYQSRC 326 (388)
Q Consensus 270 ~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~p~~ 326 (388)
+.|+++++++.++++..++++ + .++ +.++ ++.||.||+|+|...+.
T Consensus 162 ~~Gv~i~~~~~v~~i~~~~~~-~-~v~--------~~~g-~~~a~~vV~A~G~~~~~ 207 (389)
T 2gf3_A 162 ARGAKVLTHTRVEDFDISPDS-V-KIE--------TANG-SYTADKLIVSMGAWNSK 207 (389)
T ss_dssp HTTCEEECSCCEEEEEECSSC-E-EEE--------ETTE-EEEEEEEEECCGGGHHH
T ss_pred HCCCEEEcCcEEEEEEecCCe-E-EEE--------eCCC-EEEeCEEEEecCccHHH
Confidence 468999999999999865432 2 232 2333 69999999999987543
No 355
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=96.05 E-value=0.025 Score=54.89 Aligned_cols=38 Identities=21% Similarity=0.168 Sum_probs=31.0
Q ss_pred CCCcEEEECccHHHHHHHHHHHhh------------------CCCC-cEEEEcCCCC
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKL------------------LPQS-TVDIYEKLPV 49 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~------------------~~g~-~v~lie~~~~ 49 (388)
..++|+|||+|..|+.+|..|.+. ..+. +|+|+++.+.
T Consensus 144 ~~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~ 200 (460)
T 1cjc_A 144 SCDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGP 200 (460)
T ss_dssp TSSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCG
T ss_pred CCCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCCh
Confidence 468999999999999999999830 1576 7999998754
No 356
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=96.01 E-value=0.0054 Score=60.49 Aligned_cols=36 Identities=19% Similarity=0.186 Sum_probs=33.0
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCC
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPV 49 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~ 49 (388)
..+|++|||+|++|+.+|..|.+ .+.+|+++|+...
T Consensus 10 ~~~d~~iiG~G~~g~~~a~~l~~--~~~~v~~~e~~~~ 45 (507)
T 1coy_A 10 DRVPALVIGSGYGGAVAALRLTQ--AGIPTQIVEMGRS 45 (507)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHH--CCCcEEEEECCCC
Confidence 45899999999999999999999 8999999998754
No 357
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=96.00 E-value=0.033 Score=56.43 Aligned_cols=69 Identities=13% Similarity=0.193 Sum_probs=41.1
Q ss_pred hhHHHHHHHhhCCCCCCCCCCcee--EEEEecCcceeeeeCCC--CceeEEEEccCccccCCceeEEecceEEEccccCC
Q psy4525 249 RKRLTELILKTSNPDESKSNCSKY--FRPIFLRSPTEFKLNDN--GAITGINFANQQALVTEDTELIPSGIAFRSIGYQS 324 (388)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~g--v~~~~~~~~~~i~~~~~--~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~p 324 (388)
+.++...|...+. +.| +++++++.++.+..+++ +....+.+.+......+..+++.||.||.|.|.+.
T Consensus 140 q~~l~~~L~~~a~--------~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~~~G~~~~i~a~~vVgADG~~S 211 (639)
T 2dkh_A 140 QARVHDHYLERMR--------NSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAAHAGQIETVQARYVVGCDGARS 211 (639)
T ss_dssp HHHHHHHHHHHHH--------HSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGGGTTCEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHHH--------hCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEeccccCCCCeEEEEeCEEEECCCcch
Confidence 4455555555432 334 48889999999886542 22233444320000123446899999999999876
Q ss_pred c
Q psy4525 325 R 325 (388)
Q Consensus 325 ~ 325 (388)
.
T Consensus 212 ~ 212 (639)
T 2dkh_A 212 N 212 (639)
T ss_dssp H
T ss_pred H
Confidence 4
No 358
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=95.98 E-value=0.017 Score=56.36 Aligned_cols=48 Identities=17% Similarity=0.076 Sum_probs=34.3
Q ss_pred ceeEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEecceEEEccccCCcc
Q psy4525 270 SKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPSGIAFRSIGYQSRC 326 (388)
Q Consensus 270 ~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~p~~ 326 (388)
+.|+++++++.+ ++..+ ++++.++.+. +.++ ++.+|.||+|||-.+..
T Consensus 131 ~~gv~i~~~~~v-~l~~~-~~~v~Gv~v~------~~~g-~~~a~~VVlAtGg~~~~ 178 (472)
T 2e5v_A 131 EEGIPIIEDRLV-EIRVK-DGKVTGFVTE------KRGL-VEDVDKLVLATGGYSYL 178 (472)
T ss_dssp HTTCCEECCCEE-EEEEE-TTEEEEEEET------TTEE-ECCCSEEEECCCCCGGG
T ss_pred hCCCEEEECcEE-EEEEe-CCEEEEEEEE------eCCC-eEEeeeEEECCCCCccc
Confidence 458999999888 88653 4677666542 2223 47799999999987654
No 359
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=95.93 E-value=0.017 Score=50.19 Aligned_cols=35 Identities=14% Similarity=0.196 Sum_probs=31.8
Q ss_pred CCCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCC
Q psy4525 11 QLKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKL 47 (388)
Q Consensus 11 ~~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~ 47 (388)
-..++|+|||||..|...+..|.+ .|.+|+|+++.
T Consensus 29 L~gk~VLVVGgG~va~~ka~~Ll~--~GA~VtVvap~ 63 (223)
T 3dfz_A 29 LKGRSVLVVGGGTIATRRIKGFLQ--EGAAITVVAPT 63 (223)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHGG--GCCCEEEECSS
T ss_pred cCCCEEEEECCCHHHHHHHHHHHH--CCCEEEEECCC
Confidence 356899999999999999999999 89999999864
No 360
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=95.90 E-value=0.027 Score=55.36 Aligned_cols=68 Identities=9% Similarity=-0.022 Sum_probs=44.2
Q ss_pred hhHHHHHHHhhCCCCCCCCCCceeEEEEecCcceeeeeCCCC----c--eeEEEEccCccccCCceeEEecceEEEcccc
Q psy4525 249 RKRLTELILKTSNPDESKSNCSKYFRPIFLRSPTEFKLNDNG----A--ITGINFANQQALVTEDTELIPSGIAFRSIGY 322 (388)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~----~--v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~ 322 (388)
+..+..++...+. +-+..++|++.|+++...+.+ . .-.|+..++ .++..+++.|+.||+|||.
T Consensus 144 r~E~~~Yl~~~A~--------~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~---~~g~~~~~~ar~vVlatG~ 212 (501)
T 4b63_A 144 RLEFEDYMRWCAQ--------QFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNV---ETGEISARRTRKVVIAIGG 212 (501)
T ss_dssp HHHHHHHHHHHHH--------TTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEET---TTCCEEEEEEEEEEECCCC
T ss_pred HHHHHHHHHHHHH--------HcCCceEcceEEEeeccccccccccccceEEEEEecC---CCceEEEEEeCEEEECcCC
Confidence 5667777776653 223457788999988764322 1 223333332 2566788999999999998
Q ss_pred CCccC
Q psy4525 323 QSRCV 327 (388)
Q Consensus 323 ~p~~~ 327 (388)
.|+..
T Consensus 213 ~P~iP 217 (501)
T 4b63_A 213 TAKMP 217 (501)
T ss_dssp EECCC
T ss_pred CCCCC
Confidence 87654
No 361
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=95.86 E-value=0.0042 Score=61.73 Aligned_cols=35 Identities=26% Similarity=0.377 Sum_probs=31.9
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCC
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVP 50 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~ 50 (388)
.+|+||||+|+||+.+|..|.+ +.+|+|+|+.+..
T Consensus 26 ~yD~IIVGsG~AG~v~A~rLse---g~~VlvLEaG~~~ 60 (536)
T 1ju2_A 26 SYDYVIVGGGTSGCPLAATLSE---KYKVLVLERGSLP 60 (536)
T ss_dssp EEEEEEECCSTTHHHHHHHHTT---TSCEEEECSSBCG
T ss_pred cccEEEECccHHHHHHHHHHhc---CCcEEEEecCCCc
Confidence 4799999999999999999998 7899999998654
No 362
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=95.83 E-value=0.047 Score=57.13 Aligned_cols=46 Identities=22% Similarity=0.278 Sum_probs=34.5
Q ss_pred ceeEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEecceEEEccccCCc
Q psy4525 270 SKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPSGIAFRSIGYQSR 325 (388)
Q Consensus 270 ~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~p~ 325 (388)
+.|+++++++.++++..+ ++.+..+.. .++ ++.||.||+|+|....
T Consensus 163 ~~Gv~i~~~t~V~~i~~~-~~~v~~V~t--------~~G-~i~Ad~VV~AaG~~s~ 208 (830)
T 1pj5_A 163 SAGVTYRGSTTVTGIEQS-GGRVTGVQT--------ADG-VIPADIVVSCAGFWGA 208 (830)
T ss_dssp HTTCEEECSCCEEEEEEE-TTEEEEEEE--------TTE-EEECSEEEECCGGGHH
T ss_pred HcCCEEECCceEEEEEEe-CCEEEEEEE--------CCc-EEECCEEEECCccchH
Confidence 568999999999999764 355555542 334 6999999999998643
No 363
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=95.74 E-value=0.0041 Score=62.09 Aligned_cols=37 Identities=24% Similarity=0.287 Sum_probs=32.6
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCC
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVP 50 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~ 50 (388)
.+|+||||||.||+.+|.+|.+. ++.+|+|+|+.+..
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~-~~~~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTED-PDVSVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTS-TTCCEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHhC-cCCcEEEEecCCcc
Confidence 37999999999999999999973 68999999998654
No 364
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=95.70 E-value=0.062 Score=53.87 Aligned_cols=51 Identities=12% Similarity=0.035 Sum_probs=37.6
Q ss_pred ceeEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEecceEEEccccC
Q psy4525 270 SKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPSGIAFRSIGYQ 323 (388)
Q Consensus 270 ~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~ 323 (388)
+.|+++++++.++++..++++++.++...+. ..+....+.||.||+|||--
T Consensus 155 ~~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~---~~g~~~~i~A~~VVlAtGg~ 205 (588)
T 2wdq_A 155 KNHTTIFSEWYALDLVKNQDGAVVGCTALCI---ETGEVVYFKARATVLATGGA 205 (588)
T ss_dssp HTTCEEEETEEEEEEEECTTSCEEEEEEEET---TTCCEEEEEEEEEEECCCCC
T ss_pred hCCCEEEeCcEEEEEEECCCCEEEEEEEEEc---CCCeEEEEEcCEEEECCCCC
Confidence 4589999999999998753578888765321 12333579999999999963
No 365
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=95.66 E-value=0.0097 Score=57.71 Aligned_cols=76 Identities=12% Similarity=0.103 Sum_probs=52.6
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCCCCCCcchhHHHHHHHHhhcCCCcEEEceEEEEE
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTKTGDNPRVNFYGNICLGQ 91 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 91 (388)
..++|.|||.|.+|+++|..|.+ .|++|+++|..+. . ... ..+.+++.|+.+..+..
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~--~G~~V~~~D~~~~------------~--~~~----~~~~L~~~gi~~~~g~~--- 64 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAK--LGAIVTVNDGKPF------------D--ENP----TAQSLLEEGIKVVCGSH--- 64 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHH--TTCEEEEEESSCG------------G--GCH----HHHHHHHTTCEEEESCC---
T ss_pred CCCEEEEEeeCHHHHHHHHHHHh--CCCEEEEEeCCcc------------c--CCh----HHHHHHhCCCEEEECCC---
Confidence 46899999999999999999999 8999999998631 0 001 12234446787765432
Q ss_pred Eeeecccccc-cCEEEEeeCCCC
Q psy4525 92 DISLGDLTNA-YHAVVLTYGADN 113 (388)
Q Consensus 92 ~~~~~~~~~~-yd~lvlAtG~~~ 113 (388)
....... +|.||+++|..+
T Consensus 65 ---~~~~~~~~~d~vv~spgi~~ 84 (451)
T 3lk7_A 65 ---PLELLDEDFCYMIKNPGIPY 84 (451)
T ss_dssp ---CGGGGGSCEEEEEECTTSCT
T ss_pred ---hHHhhcCCCCEEEECCcCCC
Confidence 1112123 899999999655
No 366
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=95.61 E-value=0.014 Score=47.52 Aligned_cols=35 Identities=20% Similarity=0.206 Sum_probs=31.7
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCC
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLP 48 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~ 48 (388)
...+|+|||+|..|..+|..|.+ .|.+|+++++.+
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~--~g~~V~vid~~~ 52 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASS--SGHSVVVVDKNE 52 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESCG
T ss_pred CCCcEEEECCCHHHHHHHHHHHh--CCCeEEEEECCH
Confidence 45789999999999999999999 899999999863
No 367
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=95.47 E-value=0.17 Score=50.24 Aligned_cols=47 Identities=13% Similarity=0.060 Sum_probs=31.7
Q ss_pred EEecCcceeeeeCCCCceeEEEEccCccccCCceeEEecceEEEccccCCcc
Q psy4525 275 PIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPSGIAFRSIGYQSRC 326 (388)
Q Consensus 275 ~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~p~~ 326 (388)
+++++.++++..++++ +. +++.+. .++..+++.||.||.|.|.....
T Consensus 152 v~~~~~v~~~~~~~~~-v~-v~~~~~---~~G~~~~i~a~~vVgADG~~S~v 198 (549)
T 2r0c_A 152 LRTRSRLDSFEQRDDH-VR-ATITDL---RTGATRAVHARYLVACDGASSPT 198 (549)
T ss_dssp EECSEEEEEEEECSSC-EE-EEEEET---TTCCEEEEEEEEEEECCCTTCHH
T ss_pred cccCcEEEEEEEeCCE-EE-EEEEEC---CCCCEEEEEeCEEEECCCCCcHH
Confidence 8889999999875433 33 333221 02334689999999999988643
No 368
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=95.45 E-value=0.054 Score=53.71 Aligned_cols=51 Identities=16% Similarity=0.109 Sum_probs=36.8
Q ss_pred eeEEEEecCcceeeeeCCCC------ceeEEEEccCccccCCceeEEecceEEEccccCC
Q psy4525 271 KYFRPIFLRSPTEFKLNDNG------AITGINFANQQALVTEDTELIPSGIAFRSIGYQS 324 (388)
Q Consensus 271 ~gv~~~~~~~~~~i~~~~~~------~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~p 324 (388)
.||++++++.++++..++++ ++.++...+. .+++...+.||.||+|||-..
T Consensus 152 ~gv~i~~~~~v~~L~~~~~g~~~~~~~v~Gv~~~~~---~~G~~~~i~A~~VVlAtGg~~ 208 (540)
T 1chu_A 152 PNIRVLERTNAVDLIVSDKIGLPGTRRVVGAWVWNR---NKETVETCHAKAVVLATGGAS 208 (540)
T ss_dssp TTEEEECSEEEEEEEEGGGTTCCSSCBEEEEEEEET---TTTEEEEEECSEEEECCCCCG
T ss_pred CCCEEEeCcEEEEEEEcCCCCcccCCEEEEEEEEEc---CCCcEEEEEcCeEEECCCCcc
Confidence 58999999999999863334 7777765421 123334799999999999654
No 369
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=95.40 E-value=0.14 Score=51.53 Aligned_cols=51 Identities=10% Similarity=0.060 Sum_probs=35.9
Q ss_pred cee-EEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEecceEEEccccCC
Q psy4525 270 SKY-FRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPSGIAFRSIGYQS 324 (388)
Q Consensus 270 ~~g-v~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~p 324 (388)
+.+ +++++++.++++..+ ++++.++...+. ..+....+.+|.||+|+|-..
T Consensus 146 ~~gnv~i~~~~~v~~l~~~-~g~v~Gv~~~~~---~~G~~~~i~A~~VVlAtGg~s 197 (602)
T 1kf6_A 146 QFPQIQRFDEHFVLDILVD-DGHVRGLVAMNM---MEGTLVQIRANAVVMATGGAG 197 (602)
T ss_dssp TCTTEEEEETEEEEEEEEE-TTEEEEEEEEET---TTTEEEEEECSCEEECCCCCG
T ss_pred hCCCcEEEeCCEEEEEEEe-CCEEEEEEEEEc---CCCcEEEEEcCeEEECCCCCc
Confidence 456 999999999999864 467777654210 123334799999999999643
No 370
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.33 E-value=0.028 Score=44.84 Aligned_cols=34 Identities=18% Similarity=0.300 Sum_probs=31.4
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCC
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKL 47 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~ 47 (388)
...+|+|+|+|..|..+|..|.+ .|.+|+++|++
T Consensus 6 ~~~~viIiG~G~~G~~la~~L~~--~g~~v~vid~~ 39 (140)
T 3fwz_A 6 ICNHALLVGYGRVGSLLGEKLLA--SDIPLVVIETS 39 (140)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHH--TTCCEEEEESC
T ss_pred CCCCEEEECcCHHHHHHHHHHHH--CCCCEEEEECC
Confidence 35689999999999999999999 89999999986
No 371
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=95.31 E-value=0.025 Score=45.81 Aligned_cols=33 Identities=15% Similarity=0.200 Sum_probs=30.6
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCC
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKL 47 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~ 47 (388)
..+++|+|+|..|...+..|.+ .|.+|+++|+.
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~--~g~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQ--RGQNVTVISNL 35 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHH--TTCCEEEEECC
T ss_pred CCcEEEECCCHHHHHHHHHHHH--CCCCEEEEECC
Confidence 4689999999999999999999 89999999975
No 372
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=95.30 E-value=0.013 Score=58.78 Aligned_cols=38 Identities=24% Similarity=0.240 Sum_probs=33.1
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCC
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVP 50 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~ 50 (388)
..+|++|||+|++|+.+|..|.+. .+.+|+++|+....
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~-~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTEN-PKIKVLVIEKGFYE 60 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTS-TTCCEEEEESSCCC
T ss_pred ccCCEEEECcCHHHHHHHHHHHhC-CCCcEEEEecCCcc
Confidence 458999999999999999999983 58999999998543
No 373
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=95.12 E-value=0.016 Score=55.17 Aligned_cols=44 Identities=9% Similarity=0.093 Sum_probs=28.6
Q ss_pred ceeEEEEecCcce---------eeeeCCCCceeEEEEccCccccCCceeEEecceEEEccccCC
Q psy4525 270 SKYFRPIFLRSPT---------EFKLNDNGAITGINFANQQALVTEDTELIPSGIAFRSIGYQS 324 (388)
Q Consensus 270 ~~gv~~~~~~~~~---------~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~p 324 (388)
+.|+++++++.++ ++..++ +.+ .++ +.++ ++.||.||.|+|...
T Consensus 184 ~~Gv~i~~~~~v~~~~g~~~~~~i~~~~-~~v-~v~--------~~~g-~i~a~~VV~A~G~~s 236 (405)
T 3c4n_A 184 GQGAGLLLNTRAELVPGGVRLHRLTVTN-THQ-IVV--------HETR-QIRAGVIIVAAGAAG 236 (405)
T ss_dssp TTTCEEECSCEEEEETTEEEEECBCC---------C--------BCCE-EEEEEEEEECCGGGH
T ss_pred HCCCEEEcCCEEEeccccccccceEeeC-CeE-EEE--------ECCc-EEECCEEEECCCccH
Confidence 4689999998888 776432 333 332 3344 799999999999764
No 374
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=95.07 E-value=0.029 Score=44.63 Aligned_cols=33 Identities=18% Similarity=0.220 Sum_probs=30.7
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCC
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKL 47 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~ 47 (388)
.++++|+|+|..|..+|..|.+ .|++|+++|++
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~--~g~~V~~id~~ 38 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTA--AGKKVLAVDKS 38 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH--TTCCEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHH--CCCeEEEEECC
Confidence 4689999999999999999999 89999999976
No 375
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=95.05 E-value=0.19 Score=50.70 Aligned_cols=51 Identities=8% Similarity=-0.066 Sum_probs=37.7
Q ss_pred ceeEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEecceEEEccccCC
Q psy4525 270 SKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPSGIAFRSIGYQS 324 (388)
Q Consensus 270 ~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~p 324 (388)
+.|+++++++.++++..+ ++++.++...+. .++....+.|+.||+|||-..
T Consensus 167 ~~gv~i~~~~~v~~Li~~-~g~v~Gv~~~~~---~~G~~~~i~A~~VVlATGG~~ 217 (621)
T 2h88_A 167 RYDTSYFVEYFALDLLME-NGECRGVIALCI---EDGTIHRFRAKNTVIATGGYG 217 (621)
T ss_dssp TSCCEEEETEEEEEEEEE-TTEEEEEEEEET---TTCCEEEEEEEEEEECCCCCG
T ss_pred hCCCEEEEceEEEEEEEE-CCEEEEEEEEEc---CCCcEEEEEcCeEEECCCccc
Confidence 568999999999999864 477877765321 123345799999999999643
No 376
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=94.93 E-value=0.063 Score=49.50 Aligned_cols=74 Identities=15% Similarity=0.110 Sum_probs=50.6
Q ss_pred CCCcEEEECccHHHHH-HHHHHHhhCCCCcEEEEcCCCCCCCceeeCCCCCCcchhHHHHHHHHhhcCCCcEEEceEEEE
Q psy4525 12 LKPNVCIVGSGPAGFY-CAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTKTGDNPRVNFYGNICLG 90 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~-aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~ 90 (388)
..++|.|||.|.+|++ +|..|.+ .|++|+++|+.+.. | . .+.+++.|+.+..+..
T Consensus 3 ~~~~i~~iGiGg~Gms~~A~~L~~--~G~~V~~~D~~~~~---------~-------~----~~~L~~~gi~v~~g~~-- 58 (326)
T 3eag_A 3 AMKHIHIIGIGGTFMGGLAAIAKE--AGFEVSGCDAKMYP---------P-------M----STQLEALGIDVYEGFD-- 58 (326)
T ss_dssp CCCEEEEESCCSHHHHHHHHHHHH--TTCEEEEEESSCCT---------T-------H----HHHHHHTTCEEEESCC--
T ss_pred CCcEEEEEEECHHHHHHHHHHHHh--CCCEEEEEcCCCCc---------H-------H----HHHHHhCCCEEECCCC--
Confidence 3578999999999997 7888888 89999999986321 1 1 1223345777654321
Q ss_pred EEeeecccc-cccCEEEEeeCCCC
Q psy4525 91 QDISLGDLT-NAYHAVVLTYGADN 113 (388)
Q Consensus 91 ~~~~~~~~~-~~yd~lvlAtG~~~ 113 (388)
..... ..+|.||++.|..+
T Consensus 59 ----~~~l~~~~~d~vV~Spgi~~ 78 (326)
T 3eag_A 59 ----AAQLDEFKADVYVIGNVAKR 78 (326)
T ss_dssp ----GGGGGSCCCSEEEECTTCCT
T ss_pred ----HHHcCCCCCCEEEECCCcCC
Confidence 12222 35899999999654
No 377
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=94.93 E-value=0.07 Score=52.28 Aligned_cols=51 Identities=8% Similarity=-0.112 Sum_probs=35.0
Q ss_pred ceeEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEecceEEEccccCCc
Q psy4525 270 SKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPSGIAFRSIGYQSR 325 (388)
Q Consensus 270 ~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~p~ 325 (388)
+.|+++++++.++++..++ .+..+.+.+. ..++..++.||.||.|+|....
T Consensus 161 ~~Gv~i~~~~~V~~l~~~~--~~~~V~~~d~---~~G~~~~i~A~~VV~AtG~~s~ 211 (501)
T 2qcu_A 161 RKGGEVLTRTRATSARREN--GLWIVEAEDI---DTGKKYSWQARGLVNATGPWVK 211 (501)
T ss_dssp HTTCEEECSEEEEEEEEET--TEEEEEEEET---TTCCEEEEEESCEEECCGGGHH
T ss_pred HcCCEEEcCcEEEEEEEeC--CEEEEEEEEC---CCCCEEEEECCEEEECCChhHH
Confidence 4689999999999987643 4555554221 0233347999999999997643
No 378
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=94.91 E-value=0.029 Score=44.22 Aligned_cols=33 Identities=15% Similarity=0.236 Sum_probs=29.8
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCC
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKL 47 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~ 47 (388)
.++|+|||+|..|..+|..|.+ .|.+|+++|+.
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~--~g~~v~~~d~~ 36 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSE--KGHDIVLIDID 36 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHH--TTCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHh--CCCeEEEEECC
Confidence 3589999999999999999999 89999999975
No 379
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=94.78 E-value=0.029 Score=42.78 Aligned_cols=33 Identities=24% Similarity=0.439 Sum_probs=30.0
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCC-CcEEEEcCC
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQ-STVDIYEKL 47 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g-~~v~lie~~ 47 (388)
.++|+|+|+|..|..++..|.+ .| .+|+++++.
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~--~g~~~v~~~~r~ 38 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKT--SSNYSVTVADHD 38 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH--CSSEEEEEEESC
T ss_pred cCeEEEECCCHHHHHHHHHHHh--CCCceEEEEeCC
Confidence 4689999999999999999999 78 899999976
No 380
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=94.36 E-value=0.047 Score=43.15 Aligned_cols=33 Identities=12% Similarity=0.126 Sum_probs=30.2
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCC
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKL 47 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~ 47 (388)
.++|+|+|+|..|..++..|.+ .|.+|+++|+.
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~--~g~~v~~~d~~ 38 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHR--MGHEVLAVDIN 38 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH--TTCCCEEEESC
T ss_pred CCcEEEECCCHHHHHHHHHHHH--CCCEEEEEeCC
Confidence 4689999999999999999999 89999999975
No 381
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=94.09 E-value=0.14 Score=52.01 Aligned_cols=48 Identities=17% Similarity=0.050 Sum_probs=36.1
Q ss_pred eEEEEecCcceeeeeCCC--CceeEEEEccCccccCCceeEEecceEEEcccc
Q psy4525 272 YFRPIFLRSPTEFKLNDN--GAITGINFANQQALVTEDTELIPSGIAFRSIGY 322 (388)
Q Consensus 272 gv~~~~~~~~~~i~~~~~--~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~ 322 (388)
||+++.++.++++..+++ +++.++...+. .+++...+.|+.||+|||-
T Consensus 182 gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~---~~g~~~~i~Ak~VVLATGG 231 (662)
T 3gyx_A 182 QDRIIERIFIVKLLLDKNTPNRIAGAVGFNL---RANEVHIFKANAMVVACGG 231 (662)
T ss_dssp TTTEECSEEECCCEECSSSTTBEEEEEEEES---SSSCEEEEECSEEEECCCC
T ss_pred CcEEEEceEEEEEEEeCCccceEEEEEEEEc---CCCcEEEEEeCEEEECCCc
Confidence 789999999988877554 48888865321 1455567999999999994
No 382
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=94.02 E-value=0.16 Score=51.52 Aligned_cols=51 Identities=12% Similarity=-0.040 Sum_probs=37.0
Q ss_pred ceeEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEecceEEEccccCC
Q psy4525 270 SKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPSGIAFRSIGYQS 324 (388)
Q Consensus 270 ~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~p 324 (388)
+.|+++++++.++++..+ ++++.++...+. ..+....+.||.||+|||--.
T Consensus 170 ~~gv~i~~~~~v~~L~~~-~g~v~Gv~~~~~---~~G~~~~i~A~~VVlATGG~~ 220 (660)
T 2bs2_A 170 KLGVSIQDRKEAIALIHQ-DGKCYGAVVRDL---VTGDIIAYVAKGTLIATGGYG 220 (660)
T ss_dssp HHTCEEECSEEEEEEEEE-TTEEEEEEEEET---TTCCEEEEECSEEEECCCCCG
T ss_pred hCCCEEEECcEEEEEEec-CCEEEEEEEEEC---CCCcEEEEEcCEEEEccCcch
Confidence 468999999999999764 477877765321 123334699999999999643
No 383
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=93.95 E-value=0.044 Score=47.70 Aligned_cols=33 Identities=21% Similarity=0.363 Sum_probs=27.7
Q ss_pred eEEEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecCc
Q psy4525 154 EATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRGA 207 (388)
Q Consensus 154 ~vvVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~~ 207 (388)
.|+|||+|++|+-+|..|+ +.|. +|+++.+++.
T Consensus 4 dV~IIGaGpaGL~aA~~La--------------------~~G~-~V~v~Ek~~~ 36 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALT--------------------AAGH-QVHLFDKSRG 36 (336)
T ss_dssp CEEEECCSHHHHHHHHHHH--------------------HTTC-CEEEECSSSS
T ss_pred CEEEECcCHHHHHHHHHHH--------------------HCCC-CEEEEECCCC
Confidence 5999999999999999887 4555 5999998754
No 384
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=93.95 E-value=0.28 Score=49.90 Aligned_cols=20 Identities=30% Similarity=0.484 Sum_probs=18.2
Q ss_pred CeEEEEcCChHHHHHHHHhc
Q psy4525 153 EEATILGQGNVAMDVARILL 172 (388)
Q Consensus 153 ~~vvVIGgG~sg~e~a~~L~ 172 (388)
-+|+|||+|.+|+-+|..|+
T Consensus 9 ~dVlIVGaGpaGL~lA~~La 28 (665)
T 1pn0_A 9 CDVLIVGAGPAGLMAARVLS 28 (665)
T ss_dssp EEEEEECCSHHHHHHHHHHH
T ss_pred CcEEEECcCHHHHHHHHHHh
Confidence 36999999999999999886
No 385
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=93.84 E-value=0.066 Score=44.66 Aligned_cols=33 Identities=18% Similarity=0.079 Sum_probs=30.6
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCC-CCcEEEEcCC
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLP-QSTVDIYEKL 47 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~-g~~v~lie~~ 47 (388)
..+|+|||+|..|..+|..|.+ . |.+|+++|++
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~--~~g~~V~vid~~ 72 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRA--RYGKISLGIEIR 72 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHH--HHCSCEEEEESC
T ss_pred CCcEEEECCCHHHHHHHHHHHh--ccCCeEEEEECC
Confidence 4689999999999999999999 8 9999999976
No 386
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=93.71 E-value=0.073 Score=50.40 Aligned_cols=35 Identities=17% Similarity=0.304 Sum_probs=32.0
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCC
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLP 48 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~ 48 (388)
.+.+|+|||+|++|+.+|..+.. .|.+|+++|+.+
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~--lGa~V~v~D~~~ 223 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARR--LGAVVSATDVRP 223 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSST
T ss_pred CCCEEEEECCcHHHHHHHHHHHH--CCCEEEEEcCCH
Confidence 45799999999999999999999 899999999873
No 387
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=93.64 E-value=0.058 Score=51.99 Aligned_cols=36 Identities=25% Similarity=0.373 Sum_probs=32.0
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCC
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPV 49 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~ 49 (388)
..++|+|||.|.+|+++|..|.+ .|++|+++|....
T Consensus 4 ~~~~v~viG~G~~G~~~a~~l~~--~G~~v~~~D~~~~ 39 (439)
T 2x5o_A 4 QGKNVVIIGLGLTGLSCVDFFLA--RGVTPRVMDTRMT 39 (439)
T ss_dssp TTCCEEEECCHHHHHHHHHHHHT--TTCCCEEEESSSS
T ss_pred CCCEEEEEeecHHHHHHHHHHHh--CCCEEEEEECCCC
Confidence 34789999999999999999988 8999999997643
No 388
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=93.57 E-value=0.12 Score=49.98 Aligned_cols=34 Identities=18% Similarity=0.209 Sum_probs=31.4
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCC
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKL 47 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~ 47 (388)
..++|+|||+|..|...+..|.+ .|.+|+++++.
T Consensus 11 ~~~~vlVvGgG~va~~k~~~L~~--~ga~V~vi~~~ 44 (457)
T 1pjq_A 11 RDRDCLIVGGGDVAERKARLLLE--AGARLTVNALT 44 (457)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHH--TTBEEEEEESS
T ss_pred CCCEEEEECCCHHHHHHHHHHHh--CcCEEEEEcCC
Confidence 45799999999999999999999 89999999964
No 389
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=93.07 E-value=0.069 Score=47.84 Aligned_cols=34 Identities=9% Similarity=0.250 Sum_probs=31.7
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCC
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKL 47 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~ 47 (388)
..++|+|||||..|...+..|.+ .|.+|+|++..
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~--~Ga~VtViap~ 45 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMP--TGCKLTLVSPD 45 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGG--GTCEEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHh--CCCEEEEEcCC
Confidence 56899999999999999999999 89999999965
No 390
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=93.04 E-value=0.075 Score=49.89 Aligned_cols=35 Identities=17% Similarity=0.270 Sum_probs=31.9
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCC
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLP 48 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~ 48 (388)
.+.+|+|||+|.+|+.+|..+.. .|.+|+++|+.+
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~--lGa~V~v~D~~~ 217 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKR--LGAKTTGYDVRP 217 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHH--HTCEEEEECSSG
T ss_pred CCCEEEEECchHHHHHHHHHHHH--CCCEEEEEeCCH
Confidence 45799999999999999999999 799999999873
No 391
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=93.04 E-value=0.095 Score=45.07 Aligned_cols=31 Identities=29% Similarity=0.444 Sum_probs=29.4
Q ss_pred cEEEECccHHHHHHHHHHHhhCCCCcEEEEcCC
Q psy4525 15 NVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKL 47 (388)
Q Consensus 15 ~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~ 47 (388)
+|+|+|+|..|..+|..|.+ .|.+|+++|++
T Consensus 2 ~iiIiG~G~~G~~la~~L~~--~g~~v~vid~~ 32 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLS--RKYGVVIINKD 32 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHH--TTCCEEEEESC
T ss_pred EEEEECCCHHHHHHHHHHHh--CCCeEEEEECC
Confidence 69999999999999999999 89999999976
No 392
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=92.60 E-value=0.14 Score=46.09 Aligned_cols=33 Identities=27% Similarity=0.238 Sum_probs=30.7
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCC
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKL 47 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~ 47 (388)
.++|.|||+|..|...|..+.+ .|++|+++|++
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~--~G~~V~l~d~~ 36 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAF--HGFAVTAYDIN 36 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHh--CCCeEEEEeCC
Confidence 3689999999999999999999 89999999987
No 393
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=92.50 E-value=0.12 Score=49.07 Aligned_cols=34 Identities=18% Similarity=0.278 Sum_probs=31.3
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCC
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKL 47 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~ 47 (388)
.+.+|+|||+|.+|+.++..++. .|.+|+++|+.
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~--~Ga~V~v~D~~ 204 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANS--LGAIVRAFDTR 204 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHH--CCCEEEEEcCC
Confidence 46799999999999999999998 89999999976
No 394
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=92.40 E-value=0.15 Score=48.22 Aligned_cols=35 Identities=17% Similarity=0.158 Sum_probs=31.8
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCC
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLP 48 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~ 48 (388)
.+.+|+|||+|.+|+.++..++. .|.+|+++|+.+
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~--~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKR--LGAVVMATDVRA 205 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHH--CCCEEEEEeCCH
Confidence 46899999999999999999999 899999999873
No 395
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=92.28 E-value=0.061 Score=52.48 Aligned_cols=45 Identities=7% Similarity=0.012 Sum_probs=35.4
Q ss_pred ceeEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEecceEEEccccC
Q psy4525 270 SKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPSGIAFRSIGYQ 323 (388)
Q Consensus 270 ~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~ 323 (388)
+.|.+|++++.|++|..+ ++++.+|++ .+++++.||.||++++..
T Consensus 233 ~~Gg~I~~~~~V~~I~~~-~~~~~gV~~--------~~g~~~~ad~VV~~a~~~ 277 (501)
T 4dgk_A 233 DLGGEVVLNARVSHMETT-GNKIEAVHL--------EDGRRFLTQAVASNADVV 277 (501)
T ss_dssp HTTCEEECSCCEEEEEEE-TTEEEEEEE--------TTSCEEECSCEEECCC--
T ss_pred HhCCceeeecceeEEEee-CCeEEEEEe--------cCCcEEEcCEEEECCCHH
Confidence 457899999999999875 478888865 456789999999998754
No 396
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=92.04 E-value=0.073 Score=42.52 Aligned_cols=33 Identities=21% Similarity=0.204 Sum_probs=30.0
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCC
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKL 47 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~ 47 (388)
.++|+|||+|..|...+..|.+ .|.+|+++++.
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~--~g~~v~v~~r~ 53 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSY--PQYKVTVAGRN 53 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCT--TTCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHh--CCCEEEEEcCC
Confidence 6799999999999999999988 78889999976
No 397
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=91.84 E-value=0.14 Score=48.15 Aligned_cols=35 Identities=20% Similarity=0.425 Sum_probs=31.9
Q ss_pred CCCCcEEEECccHHHHHHHHHHHhhCCCC-cEEEEcCC
Q psy4525 11 QLKPNVCIVGSGPAGFYCAQQILKLLPQS-TVDIYEKL 47 (388)
Q Consensus 11 ~~~~~vvIIGaG~aGl~aA~~l~~~~~g~-~v~lie~~ 47 (388)
..+.+|||+|+|.||+.+|..+.. .|. +|+++|+.
T Consensus 186 l~d~kVVi~GAGaAG~~iA~ll~~--~Ga~~I~v~D~~ 221 (398)
T 2a9f_A 186 LDEVSIVVNGGGSAGLSITRKLLA--AGATKVTVVDKF 221 (398)
T ss_dssp TTSCEEEEECCSHHHHHHHHHHHH--HTCCEEEEEETT
T ss_pred CCccEEEEECCCHHHHHHHHHHHH--cCCCeEEEEECC
Confidence 456799999999999999999999 798 99999987
No 398
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=91.57 E-value=0.5 Score=40.84 Aligned_cols=50 Identities=16% Similarity=0.232 Sum_probs=36.0
Q ss_pred CCCCCeEEEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecCcccccCCHHHHHHHhcCCCc
Q psy4525 149 SLDCEEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRGALQVAFTIKEFREMTKLPHV 226 (388)
Q Consensus 149 ~~~~~~vvVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~~~~~~~~~~el~~l~~~~~~ 226 (388)
...+++|+|||||.+|...+..|. +.|+ +|+++.+.. .+++.++.....+
T Consensus 28 ~L~gk~VLVVGgG~va~~ka~~Ll--------------------~~GA-~VtVvap~~-------~~~l~~l~~~~~i 77 (223)
T 3dfz_A 28 DLKGRSVLVVGGGTIATRRIKGFL--------------------QEGA-AITVVAPTV-------SAEINEWEAKGQL 77 (223)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHG--------------------GGCC-CEEEECSSC-------CHHHHHHHHTTSC
T ss_pred EcCCCEEEEECCCHHHHHHHHHHH--------------------HCCC-EEEEECCCC-------CHHHHHHHHcCCc
Confidence 456899999999999999999776 3455 599988642 2456666544433
No 399
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=91.53 E-value=0.2 Score=46.69 Aligned_cols=35 Identities=29% Similarity=0.398 Sum_probs=31.9
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCC
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPV 49 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~ 49 (388)
+|+|+|||||..|..++..+++ .|++++++|..+.
T Consensus 1 MK~I~ilGgg~~g~~~~~~Ak~--~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 1 MKTICLVGGKLQGFEAAYLSKK--AGMKVVLVDKNPQ 35 (363)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHH--CCCEEEEEeCCCC
Confidence 3789999999999999999999 9999999997754
No 400
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=91.50 E-value=0.19 Score=45.91 Aligned_cols=34 Identities=12% Similarity=0.167 Sum_probs=30.1
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCC--cEEEEcCC
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQS--TVDIYEKL 47 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~--~v~lie~~ 47 (388)
.+.+|+|||+|..|...|..|.+ .|. +|+++|+.
T Consensus 6 ~~mkI~IiGaG~vG~~~a~~l~~--~g~~~~V~l~d~~ 41 (319)
T 1lld_A 6 KPTKLAVIGAGAVGSTLAFAAAQ--RGIAREIVLEDIA 41 (319)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHH--TTCCSEEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHh--CCCCCEEEEEeCC
Confidence 34689999999999999999998 787 99999976
No 401
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=91.35 E-value=0.24 Score=42.35 Aligned_cols=36 Identities=17% Similarity=0.168 Sum_probs=31.3
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCC
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPV 49 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~ 49 (388)
..++|.|||+|..|.+.|..|.+ .|.+|+++++.+.
T Consensus 18 ~~~~I~iiG~G~mG~~la~~l~~--~g~~V~~~~~~~~ 53 (209)
T 2raf_A 18 QGMEITIFGKGNMGQAIGHNFEI--AGHEVTYYGSKDQ 53 (209)
T ss_dssp --CEEEEECCSHHHHHHHHHHHH--TTCEEEEECTTCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHH--CCCEEEEEcCCHH
Confidence 35689999999999999999999 8999999998754
No 402
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=91.35 E-value=0.24 Score=44.91 Aligned_cols=33 Identities=24% Similarity=0.259 Sum_probs=30.6
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCC
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKL 47 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~ 47 (388)
.++|.|||+|..|...|..|.+ .|++|+++|++
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~--~G~~V~~~d~~ 47 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAA--TGHTVVLVDQT 47 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHh--CCCeEEEEECC
Confidence 4689999999999999999999 89999999986
No 403
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=91.32 E-value=0.21 Score=46.68 Aligned_cols=33 Identities=24% Similarity=0.340 Sum_probs=30.6
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCC
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKL 47 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~ 47 (388)
+.+|+|+|+|.+|..++..++. .|.+|+++++.
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~--~Ga~V~v~dr~ 199 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVG--LGAQVQIFDIN 199 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHh--CCCEEEEEeCC
Confidence 4799999999999999999999 89999999976
No 404
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=91.31 E-value=0.21 Score=45.81 Aligned_cols=32 Identities=19% Similarity=0.423 Sum_probs=30.0
Q ss_pred CcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCC
Q psy4525 14 PNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKL 47 (388)
Q Consensus 14 ~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~ 47 (388)
++|+|||+|..|.+.|..|.+ .|.+|++++|.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~--~g~~V~~~~r~ 34 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAK--TGHCVSVVSRS 34 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHH--TTCEEEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHh--CCCeEEEEeCC
Confidence 589999999999999999999 89999999986
No 405
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=91.24 E-value=0.21 Score=45.80 Aligned_cols=33 Identities=21% Similarity=0.326 Sum_probs=29.9
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCC-cEEEEcCC
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQS-TVDIYEKL 47 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~-~v~lie~~ 47 (388)
+.+|+|||+|..|...|..|.+ .|+ +|+++|+.
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~--~g~~~V~l~D~~ 37 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGK--DNLADVVLFDIA 37 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--HTCCEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHh--CCCceEEEEeCC
Confidence 4689999999999999999998 687 89999976
No 406
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=91.21 E-value=0.23 Score=45.30 Aligned_cols=36 Identities=19% Similarity=0.228 Sum_probs=32.4
Q ss_pred CCCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCC
Q psy4525 11 QLKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLP 48 (388)
Q Consensus 11 ~~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~ 48 (388)
...++|.|||.|..|...|..|.+ .|++|+++|+.+
T Consensus 19 ~~m~~I~iIG~G~mG~~~A~~l~~--~G~~V~~~dr~~ 54 (310)
T 3doj_A 19 SHMMEVGFLGLGIMGKAMSMNLLK--NGFKVTVWNRTL 54 (310)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSG
T ss_pred ccCCEEEEECccHHHHHHHHHHHH--CCCeEEEEeCCH
Confidence 345789999999999999999999 899999999874
No 407
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=91.13 E-value=0.18 Score=47.25 Aligned_cols=35 Identities=20% Similarity=0.264 Sum_probs=31.7
Q ss_pred CCCCcEEEECccHHHHHHHHHHHhhCCCC-cEEEEcCC
Q psy4525 11 QLKPNVCIVGSGPAGFYCAQQILKLLPQS-TVDIYEKL 47 (388)
Q Consensus 11 ~~~~~vvIIGaG~aGl~aA~~l~~~~~g~-~v~lie~~ 47 (388)
....+|+|+|+|.+|..+|..|.. .|. +|+++|+.
T Consensus 190 l~~~kVVv~GAGaAG~~iAkll~~--~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 190 IEEVKVVVNGIGAAGYNIVKFLLD--LGVKNVVAVDRK 225 (388)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHH--HTCCEEEEEETT
T ss_pred CCCcEEEEECCCHHHHHHHHHHHh--CCCCeEEEEECC
Confidence 456899999999999999999999 787 79999987
No 408
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=91.04 E-value=0.25 Score=45.56 Aligned_cols=32 Identities=22% Similarity=0.552 Sum_probs=29.7
Q ss_pred CcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCC
Q psy4525 14 PNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKL 47 (388)
Q Consensus 14 ~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~ 47 (388)
++|+|||+|..|...|..|.+ .|.+|+++++.
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~--~g~~V~~~~r~ 35 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLAL--AGEAINVLARG 35 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHH--TTCCEEEECCH
T ss_pred CEEEEECcCHHHHHHHHHHHH--CCCEEEEEECh
Confidence 589999999999999999999 89999999864
No 409
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=90.92 E-value=0.25 Score=45.21 Aligned_cols=35 Identities=31% Similarity=0.344 Sum_probs=30.6
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCC
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLP 48 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~ 48 (388)
...+|+|||+|..|..-|..++. .|++|+++|..+
T Consensus 5 ~~~~VaViGaG~MG~giA~~~a~--~G~~V~l~D~~~ 39 (319)
T 3ado_A 5 AAGDVLIVGSGLVGRSWAMLFAS--GGFRVKLYDIEP 39 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHH--TTCCEEEECSCH
T ss_pred CCCeEEEECCcHHHHHHHHHHHh--CCCeEEEEECCH
Confidence 34689999999999999999999 899999999763
No 410
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=90.84 E-value=0.26 Score=44.06 Aligned_cols=33 Identities=18% Similarity=0.375 Sum_probs=30.3
Q ss_pred cEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCC
Q psy4525 15 NVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPV 49 (388)
Q Consensus 15 ~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~ 49 (388)
+|.|||+|..|...|..|.+ .|.+|+++++.+.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~--~g~~V~~~~r~~~ 34 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCK--QGHEVQGWLRVPQ 34 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHH--TTCEEEEECSSCC
T ss_pred eEEEECcCHHHHHHHHHHHh--CCCCEEEEEcCcc
Confidence 69999999999999999999 8999999998743
No 411
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=90.80 E-value=0.31 Score=47.65 Aligned_cols=73 Identities=16% Similarity=0.110 Sum_probs=49.7
Q ss_pred CCCCcEEEECccHHHHH-HHHHHHhhCCCCcEEEEcCCCCCCCceeeCCCCCCcchhHHHHHHHHhhcCCCcEEEceEEE
Q psy4525 11 QLKPNVCIVGSGPAGFY-CAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPDHPEVKNVINTFTKTGDNPRVNFYGNICL 89 (388)
Q Consensus 11 ~~~~~vvIIGaG~aGl~-aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v 89 (388)
...++|.|||.|-+|++ +|..|.+ .|++|++.|.... | . .+.++..|+.+..+..
T Consensus 20 ~~~~~v~viGiG~sG~s~~A~~l~~--~G~~V~~~D~~~~----------~-------~----~~~l~~~gi~~~~g~~- 75 (494)
T 4hv4_A 20 RRVRHIHFVGIGGAGMGGIAEVLAN--EGYQISGSDLAPN----------S-------V----TQHLTALGAQIYFHHR- 75 (494)
T ss_dssp --CCEEEEETTTSTTHHHHHHHHHH--TTCEEEEECSSCC----------H-------H----HHHHHHTTCEEESSCC-
T ss_pred ccCCEEEEEEEcHhhHHHHHHHHHh--CCCeEEEEECCCC----------H-------H----HHHHHHCCCEEECCCC-
Confidence 34589999999999997 6999999 8999999996521 0 1 1224445787765421
Q ss_pred EEEeeecccccccCEEEEeeCCCC
Q psy4525 90 GQDISLGDLTNAYHAVVLTYGADN 113 (388)
Q Consensus 90 ~~~~~~~~~~~~yd~lvlAtG~~~ 113 (388)
. +....+|.||++.|..+
T Consensus 76 -----~-~~~~~~d~vV~Spgi~~ 93 (494)
T 4hv4_A 76 -----P-ENVLDASVVVVSTAISA 93 (494)
T ss_dssp -----G-GGGTTCSEEEECTTSCT
T ss_pred -----H-HHcCCCCEEEECCCCCC
Confidence 1 11135899999998654
No 412
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=90.73 E-value=0.25 Score=45.78 Aligned_cols=32 Identities=16% Similarity=0.187 Sum_probs=29.8
Q ss_pred CcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCC
Q psy4525 14 PNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKL 47 (388)
Q Consensus 14 ~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~ 47 (388)
.+|.|||+|..|...|..|.+ .|.+|+++++.
T Consensus 5 mki~iiG~G~~G~~~a~~L~~--~g~~V~~~~r~ 36 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLAL--KGQSVLAWDID 36 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--TTCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHh--CCCEEEEEeCC
Confidence 589999999999999999999 89999999876
No 413
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=90.58 E-value=0.32 Score=44.70 Aligned_cols=33 Identities=27% Similarity=0.426 Sum_probs=29.6
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCC-cEEEEcCC
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQS-TVDIYEKL 47 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~-~v~lie~~ 47 (388)
..+|+|||+|..|..+|..|.. .++ +|+++|..
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~--~g~~~v~L~Di~ 37 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQ--KNLGDVVLFDIV 37 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCCEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHh--CCCCeEEEEeCC
Confidence 4689999999999999999999 776 89999976
No 414
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=90.53 E-value=0.31 Score=41.84 Aligned_cols=34 Identities=24% Similarity=0.220 Sum_probs=29.7
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCC
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKL 47 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~ 47 (388)
..++|.|||+|..|...|..|.+ .|.+|++++++
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~--~g~~V~~~~r~ 60 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVG--SGFKVVVGSRN 60 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHH--TTCCEEEEESS
T ss_pred CCCEEEEEccCHHHHHHHHHHHH--CCCEEEEEeCC
Confidence 44689999999999999999998 78999999876
No 415
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=90.37 E-value=0.29 Score=46.03 Aligned_cols=34 Identities=24% Similarity=0.371 Sum_probs=31.2
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCC
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKL 47 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~ 47 (388)
.+++|+|||+|..|..+|..++. .|.+|+++|+.
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~--~Ga~V~~~d~~ 200 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANG--MGATVTVLDIN 200 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESC
T ss_pred CCCEEEEECCCHHHHHHHHHHHh--CCCEEEEEeCC
Confidence 46899999999999999999999 89999999976
No 416
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=90.33 E-value=0.3 Score=44.75 Aligned_cols=34 Identities=32% Similarity=0.366 Sum_probs=30.8
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCC
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLP 48 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~ 48 (388)
.++|.|||+|.-|...|..+.+ .|++|+++|+++
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~--~G~~V~l~d~~~ 39 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFAS--GGFRVKLYDIEP 39 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHH--TTCCEEEECSCH
T ss_pred CceEEEEeeCHHHHHHHHHHHH--CCCEEEEEeCCH
Confidence 4689999999999999999999 899999999873
No 417
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=90.31 E-value=0.28 Score=45.29 Aligned_cols=33 Identities=21% Similarity=0.290 Sum_probs=29.7
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCC-cEEEEcCC
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQS-TVDIYEKL 47 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~-~v~lie~~ 47 (388)
+.+|+|||+|..|..+|..|.. .++ +|+++|..
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~--~g~~~V~L~D~~ 42 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCAL--RELADVVLYDVV 42 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--HTCCEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHh--CCCCeEEEEECC
Confidence 3689999999999999999998 676 89999976
No 418
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=90.30 E-value=0.28 Score=44.41 Aligned_cols=32 Identities=16% Similarity=0.291 Sum_probs=29.8
Q ss_pred CcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCC
Q psy4525 14 PNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKL 47 (388)
Q Consensus 14 ~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~ 47 (388)
.+|.|||+|..|...|..|.+ .|.+|++++++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~--~g~~V~~~~r~ 35 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQ--GGNDVTLIDQW 35 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--TTCEEEEECSC
T ss_pred CeEEEECcCHHHHHHHHHHHh--CCCcEEEEECC
Confidence 489999999999999999999 89999999976
No 419
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=90.26 E-value=0.3 Score=45.76 Aligned_cols=34 Identities=26% Similarity=0.326 Sum_probs=31.2
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCC
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKL 47 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~ 47 (388)
.+++|+|+|+|..|..+|..++. .|.+|+++|+.
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~--~Ga~V~~~d~~ 198 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALG--MGAQVTILDVN 198 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESC
T ss_pred CCCEEEEECCCHHHHHHHHHHHh--CCCEEEEEECC
Confidence 45899999999999999999999 89999999976
No 420
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=90.20 E-value=0.24 Score=45.15 Aligned_cols=32 Identities=22% Similarity=0.449 Sum_probs=29.3
Q ss_pred CcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCC
Q psy4525 14 PNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKL 47 (388)
Q Consensus 14 ~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~ 47 (388)
++|+|||+|..|.+.|..|.+ .|.+|++++|+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~--~g~~V~~~~r~ 34 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQR--SGEDVHFLLRR 34 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHH--TSCCEEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHH--CCCeEEEEEcC
Confidence 589999999999999999999 89999999976
No 421
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=90.08 E-value=0.25 Score=43.58 Aligned_cols=34 Identities=21% Similarity=0.253 Sum_probs=30.8
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCC-cEEEEcCCC
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQS-TVDIYEKLP 48 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~-~v~lie~~~ 48 (388)
..+|+|||+|..|..+|..|.+ .|. +++++|+..
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~--~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLAS--AGVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHH--HTCSEEEEECCCB
T ss_pred CCeEEEEeeCHHHHHHHHHHHH--cCCCeEEEEcCCC
Confidence 4689999999999999999999 787 899999874
No 422
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=90.05 E-value=0.37 Score=42.97 Aligned_cols=33 Identities=21% Similarity=0.244 Sum_probs=31.0
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCC
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKL 47 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~ 47 (388)
.++++|||+|-+|.+++..|.+ .|.+|++++|.
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~--~G~~v~V~nRt 150 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKK--QGLQVSVLNRS 150 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHH--CCCEEEEEeCC
Confidence 6899999999999999999999 88999999987
No 423
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=89.93 E-value=0.37 Score=44.34 Aligned_cols=33 Identities=18% Similarity=0.367 Sum_probs=29.9
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCC-cEEEEcCC
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQS-TVDIYEKL 47 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~-~v~lie~~ 47 (388)
+.+|+|||+|..|...|..+.. .|+ +|+++|..
T Consensus 14 ~~kI~ViGaG~vG~~iA~~la~--~g~~~V~L~Di~ 47 (328)
T 2hjr_A 14 RKKISIIGAGQIGSTIALLLGQ--KDLGDVYMFDII 47 (328)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCCEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHh--CCCCeEEEEECC
Confidence 3689999999999999999999 787 89999976
No 424
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=89.81 E-value=0.21 Score=48.63 Aligned_cols=42 Identities=12% Similarity=-0.043 Sum_probs=29.4
Q ss_pred CCceeEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEecceEEEccc
Q psy4525 268 NCSKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPSGIAFRSIG 321 (388)
Q Consensus 268 ~~~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G 321 (388)
+.+.|+++++++.+++|..++ +. +. ..+|+++.||.||+++-
T Consensus 232 l~~~g~~i~~~~~V~~I~~~~-~~---v~--------~~~G~~~~ad~vI~t~P 273 (513)
T 4gde_A 232 LPKEKTRFGEKGKVTKVNANN-KT---VT--------LQDGTTIGYKKLVSTMA 273 (513)
T ss_dssp SCGGGEEESGGGCEEEEETTT-TE---EE--------ETTSCEEEEEEEEECSC
T ss_pred HHhcCeeeecceEEEEEEccC-CE---EE--------EcCCCEEECCEEEECCC
Confidence 456678888888888887543 22 22 34567899999998864
No 425
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=89.72 E-value=0.43 Score=42.49 Aligned_cols=35 Identities=17% Similarity=0.233 Sum_probs=31.4
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCC
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPV 49 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~ 49 (388)
+++|+|.|+|..|..++..|.+ .|.+|+++.|...
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~--~g~~V~~~~r~~~ 37 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTA--QGHEVTGLRRSAQ 37 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHH--TTCCEEEEECTTS
T ss_pred CCcEEEECCCHHHHHHHHHHHH--CCCEEEEEeCCcc
Confidence 4689999999999999999999 8999999998743
No 426
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=89.56 E-value=0.39 Score=42.84 Aligned_cols=34 Identities=18% Similarity=0.212 Sum_probs=31.0
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCC
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKL 47 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~ 47 (388)
..++++|+|+|-+|..+|..|.+ .|.+|++++|.
T Consensus 118 ~~k~vlViGaGg~g~a~a~~L~~--~G~~V~v~~R~ 151 (271)
T 1nyt_A 118 PGLRILLIGAGGASRGVLLPLLS--LDCAVTITNRT 151 (271)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSS
T ss_pred CCCEEEEECCcHHHHHHHHHHHH--cCCEEEEEECC
Confidence 45789999999999999999999 88999999876
No 427
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=89.51 E-value=0.48 Score=44.44 Aligned_cols=37 Identities=22% Similarity=0.244 Sum_probs=33.0
Q ss_pred CCCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCC
Q psy4525 11 QLKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPV 49 (388)
Q Consensus 11 ~~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~ 49 (388)
...++|.|||+|..|..++..+++ .|++|+++|..+.
T Consensus 10 ~~~~~IlIlG~G~lg~~la~aa~~--lG~~viv~d~~~~ 46 (377)
T 3orq_A 10 KFGATIGIIGGGQLGKMMAQSAQK--MGYKVVVLDPSED 46 (377)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESCTT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHH--CCCEEEEEECCCC
Confidence 456899999999999999999999 8999999997644
No 428
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=89.48 E-value=0.47 Score=44.66 Aligned_cols=37 Identities=14% Similarity=0.139 Sum_probs=33.1
Q ss_pred CCCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCC
Q psy4525 11 QLKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPV 49 (388)
Q Consensus 11 ~~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~ 49 (388)
...++|+|||+|..|..++..+++ .|++|+++|..+.
T Consensus 12 ~~~k~IlIlG~G~~g~~la~aa~~--~G~~vi~~d~~~~ 48 (389)
T 3q2o_A 12 LPGKTIGIIGGGQLGRMMALAAKE--MGYKIAVLDPTKN 48 (389)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHH--TTCEEEEEESSTT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHH--cCCEEEEEeCCCC
Confidence 456899999999999999999999 8999999997643
No 429
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=89.39 E-value=0.36 Score=46.96 Aligned_cols=35 Identities=20% Similarity=0.185 Sum_probs=31.8
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCC
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLP 48 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~ 48 (388)
...+|.|||+|..|+..|..|++ .|++|+++|+++
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~--~G~~V~~~d~~~ 41 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLAD--IGHDVFCLDVDQ 41 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSCH
T ss_pred CCceEEEECcCHHHHHHHHHHHh--CCCEEEEEECCH
Confidence 34799999999999999999999 899999999864
No 430
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=89.37 E-value=0.31 Score=46.95 Aligned_cols=43 Identities=9% Similarity=0.033 Sum_probs=30.1
Q ss_pred ceeEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEecceEEEcccc
Q psy4525 270 SKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPSGIAFRSIGY 322 (388)
Q Consensus 270 ~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~ 322 (388)
+.|+++++++.|++|..++++ +..+. + ++.++.||.||+|++.
T Consensus 246 ~~g~~i~~~~~V~~i~~~~~~-~~~v~--------~-~~~~~~ad~vv~a~p~ 288 (477)
T 3nks_A 246 SRGVSVLRGQPVCGLSLQAEG-RWKVS--------L-RDSSLEADHVISAIPA 288 (477)
T ss_dssp HTTCEEECSCCCCEEEECGGG-CEEEE--------C-SSCEEEESEEEECSCH
T ss_pred hcCCEEEeCCEEEEEEEcCCc-eEEEE--------E-CCeEEEcCEEEECCCH
Confidence 347899999999999865433 22332 2 2336999999999975
No 431
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=89.30 E-value=0.4 Score=43.90 Aligned_cols=34 Identities=21% Similarity=0.320 Sum_probs=29.5
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCC--cEEEEcCC
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQS--TVDIYEKL 47 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~--~v~lie~~ 47 (388)
++.+|+|||+|..|.++|..|.. .+. +++++|..
T Consensus 6 ~~~KI~IiGaG~vG~~~a~~l~~--~~~~~ev~L~Di~ 41 (318)
T 1y6j_A 6 SRSKVAIIGAGFVGASAAFTMAL--RQTANELVLIDVF 41 (318)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHH--TTCSSEEEEECCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHh--CCCCCEEEEEeCC
Confidence 34689999999999999999998 665 89999975
No 432
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=89.25 E-value=0.33 Score=43.91 Aligned_cols=35 Identities=17% Similarity=0.198 Sum_probs=31.9
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCC
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPV 49 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~ 49 (388)
.++|.|||.|..|...|..|.+ .|++|+++|+++.
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~--~G~~V~~~dr~~~ 49 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTE--WPGGVTVYDIRIE 49 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTT--STTCEEEECSSTT
T ss_pred CCeEEEECcCHHHHHHHHHHHH--CCCeEEEEeCCHH
Confidence 4689999999999999999999 8999999998743
No 433
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=89.22 E-value=0.42 Score=41.85 Aligned_cols=36 Identities=19% Similarity=0.246 Sum_probs=31.5
Q ss_pred CCCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCC
Q psy4525 11 QLKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLP 48 (388)
Q Consensus 11 ~~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~ 48 (388)
...++|.|||+|..|...|..|.+ .|++|+++++.+
T Consensus 17 ~~~~kIgiIG~G~mG~alA~~L~~--~G~~V~~~~r~~ 52 (245)
T 3dtt_A 17 FQGMKIAVLGTGTVGRTMAGALAD--LGHEVTIGTRDP 52 (245)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESCH
T ss_pred cCCCeEEEECCCHHHHHHHHHHHH--CCCEEEEEeCCh
Confidence 346899999999999999999999 899999999873
No 434
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=89.14 E-value=0.39 Score=43.66 Aligned_cols=31 Identities=23% Similarity=0.286 Sum_probs=28.5
Q ss_pred cEEEECccHHHHHHHHHHHhhCCCC--cEEEEcCC
Q psy4525 15 NVCIVGSGPAGFYCAQQILKLLPQS--TVDIYEKL 47 (388)
Q Consensus 15 ~vvIIGaG~aGl~aA~~l~~~~~g~--~v~lie~~ 47 (388)
+|+|||+|..|.+.|..|.. .+. +|+++|..
T Consensus 2 kI~VIGaG~vG~~la~~la~--~g~~~eV~L~D~~ 34 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVL--RGSCSELVLVDRD 34 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHH--TTCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHh--CCCCCEEEEEeCC
Confidence 79999999999999999998 787 89999975
No 435
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=89.13 E-value=0.5 Score=45.57 Aligned_cols=35 Identities=17% Similarity=0.031 Sum_probs=31.9
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCC
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLP 48 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~ 48 (388)
..++|.|||+|.-|...|..+++ .|++|+++|+++
T Consensus 53 ~i~kVaVIGaG~MG~~IA~~la~--aG~~V~l~D~~~ 87 (460)
T 3k6j_A 53 DVNSVAIIGGGTMGKAMAICFGL--AGIETFLVVRNE 87 (460)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSCH
T ss_pred cCCEEEEECCCHHHHHHHHHHHH--CCCeEEEEECcH
Confidence 34789999999999999999999 899999999874
No 436
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=89.11 E-value=0.42 Score=45.48 Aligned_cols=34 Identities=21% Similarity=0.273 Sum_probs=31.3
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCC
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLP 48 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~ 48 (388)
..+|+|||.|..|...|..|.+ .|.+|+++|+++
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~--~g~~vvvId~d~ 37 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLS--SGVKMVVLDHDP 37 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH--TTCCEEEEECCH
T ss_pred CCeEEEECCCHHHHHHHHHHHH--CCCCEEEEECCH
Confidence 4579999999999999999999 899999999874
No 437
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=89.09 E-value=0.37 Score=46.43 Aligned_cols=34 Identities=18% Similarity=0.220 Sum_probs=31.2
Q ss_pred CcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCC
Q psy4525 14 PNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPV 49 (388)
Q Consensus 14 ~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~ 49 (388)
.+|.|||+|..|+..|..|.+ .|++|+++|+++.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~--~G~~V~~~D~~~~ 36 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAE--LGANVRCIDTDRN 36 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--TTCEEEEECSCHH
T ss_pred CEEEEECcCHHHHHHHHHHHh--cCCEEEEEECCHH
Confidence 489999999999999999999 8999999998743
No 438
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=89.04 E-value=0.37 Score=46.80 Aligned_cols=36 Identities=14% Similarity=0.099 Sum_probs=32.8
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCC-CC-cEEEEcCCCC
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLP-QS-TVDIYEKLPV 49 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~-g~-~v~lie~~~~ 49 (388)
..++|.|||+|.-|+..|..|++ . |+ +|+++|+++.
T Consensus 17 ~~mkIaVIGlG~mG~~lA~~la~--~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 17 PIKKIGVLGMGYVGIPAAVLFAD--APCFEKVLGFQRNSK 54 (478)
T ss_dssp SCCEEEEECCSTTHHHHHHHHHH--STTCCEEEEECCCCT
T ss_pred CCCEEEEECcCHHHHHHHHHHHH--hCCCCeEEEEECChh
Confidence 45689999999999999999999 7 99 9999998865
No 439
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=89.03 E-value=0.4 Score=43.04 Aligned_cols=33 Identities=24% Similarity=0.458 Sum_probs=30.6
Q ss_pred CcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCC
Q psy4525 14 PNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLP 48 (388)
Q Consensus 14 ~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~ 48 (388)
++|.|||.|..|...|..|.+ .|++|+++++++
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~--~G~~V~~~dr~~ 34 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVK--AGCSVTIWNRSP 34 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSG
T ss_pred CEEEEEeecHHHHHHHHHHHH--CCCeEEEEcCCH
Confidence 589999999999999999999 899999999873
No 440
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=89.03 E-value=0.44 Score=43.56 Aligned_cols=34 Identities=18% Similarity=0.240 Sum_probs=30.5
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCC-cEEEEcCC
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQS-TVDIYEKL 47 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~-~v~lie~~ 47 (388)
..++|+|||+|..|..+|..+.. .+. +++++|..
T Consensus 7 ~~~kv~ViGaG~vG~~ia~~l~~--~g~~~v~l~D~~ 41 (315)
T 3tl2_A 7 KRKKVSVIGAGFTGATTAFLLAQ--KELADVVLVDIP 41 (315)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH--TTCCEEEEECCG
T ss_pred CCCEEEEECCCHHHHHHHHHHHh--CCCCeEEEEecc
Confidence 34689999999999999999999 788 99999976
No 441
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=89.02 E-value=0.48 Score=44.13 Aligned_cols=33 Identities=21% Similarity=0.305 Sum_probs=30.7
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCC
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKL 47 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~ 47 (388)
..+|.|||+|.-|.+.|..|.+ .|.+|++++++
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~--~G~~V~l~~r~ 61 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLAR--KGQKVRLWSYE 61 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHT--TTCCEEEECSC
T ss_pred CCeEEEECccHHHHHHHHHHHH--CCCeEEEEeCC
Confidence 4689999999999999999999 89999999986
No 442
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=89.02 E-value=0.43 Score=43.26 Aligned_cols=34 Identities=12% Similarity=0.211 Sum_probs=30.8
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCC-cEEEEcCC
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQS-TVDIYEKL 47 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~-~v~lie~~ 47 (388)
..++++|||+|.+|..+|..|.+ .|. +|++++|.
T Consensus 140 ~~~~vlVlGaGg~g~aia~~L~~--~G~~~V~v~nR~ 174 (297)
T 2egg_A 140 DGKRILVIGAGGGARGIYFSLLS--TAAERIDMANRT 174 (297)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHT--TTCSEEEEECSS
T ss_pred CCCEEEEECcHHHHHHHHHHHHH--CCCCEEEEEeCC
Confidence 45799999999999999999999 897 89999976
No 443
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=88.96 E-value=0.44 Score=43.20 Aligned_cols=33 Identities=24% Similarity=0.167 Sum_probs=30.8
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCC
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKL 47 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~ 47 (388)
.++|.|||.|..|...|..|.+ .|++|+++|++
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~--~G~~V~~~dr~ 39 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLR--AGLSTWGADLN 39 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSC
T ss_pred CCeEEEECCCHHHHHHHHHHHH--CCCeEEEEECC
Confidence 4689999999999999999999 89999999976
No 444
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=88.96 E-value=0.48 Score=43.47 Aligned_cols=34 Identities=18% Similarity=0.223 Sum_probs=30.3
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCC-cEEEEcCC
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQS-TVDIYEKL 47 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~-~v~lie~~ 47 (388)
...+|+|||+|..|.++|..|.. .+. +++++|..
T Consensus 6 ~~~kI~viGaG~vG~~~a~~l~~--~~~~~v~L~Di~ 40 (324)
T 3gvi_A 6 ARNKIALIGSGMIGGTLAHLAGL--KELGDVVLFDIA 40 (324)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH--TTCCEEEEECSS
T ss_pred cCCEEEEECCCHHHHHHHHHHHh--CCCCeEEEEeCC
Confidence 45689999999999999999998 677 99999976
No 445
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=88.80 E-value=0.32 Score=46.18 Aligned_cols=42 Identities=12% Similarity=0.218 Sum_probs=32.0
Q ss_pred ceeEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEecceEEEccccC
Q psy4525 270 SKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPSGIAFRSIGYQ 323 (388)
Q Consensus 270 ~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~ 323 (388)
+.|+++++++.++++..++ +.+ +. .+++++.||.||+|+|..
T Consensus 201 ~~G~~i~~~~~V~~i~~~~-~~v--V~---------~~g~~~~ad~Vv~a~~~~ 242 (421)
T 3nrn_A 201 ENKGKILTRKEVVEINIEE-KKV--YT---------RDNEEYSFDVAISNVGVR 242 (421)
T ss_dssp TTTCEEESSCCEEEEETTT-TEE--EE---------TTCCEEECSEEEECSCHH
T ss_pred HCCCEEEcCCeEEEEEEEC-CEE--EE---------eCCcEEEeCEEEECCCHH
Confidence 5689999999999998643 444 31 234579999999999964
No 446
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=88.76 E-value=0.54 Score=43.12 Aligned_cols=34 Identities=24% Similarity=0.315 Sum_probs=29.8
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCC-cEEEEcCC
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQS-TVDIYEKL 47 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~-~v~lie~~ 47 (388)
...+|+|||+|..|.++|..|.. .+. +++++|..
T Consensus 4 ~~~kI~iiGaG~vG~~~a~~l~~--~~~~~v~l~Di~ 38 (321)
T 3p7m_A 4 ARKKITLVGAGNIGGTLAHLALI--KQLGDVVLFDIA 38 (321)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH--TTCCEEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHh--CCCceEEEEeCC
Confidence 34689999999999999999998 666 99999976
No 447
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=88.73 E-value=0.3 Score=47.45 Aligned_cols=21 Identities=24% Similarity=0.409 Sum_probs=19.3
Q ss_pred CCeEEEEcCChHHHHHHHHhc
Q psy4525 152 CEEATILGQGNVAMDVARILL 172 (388)
Q Consensus 152 ~~~vvVIGgG~sg~e~a~~L~ 172 (388)
.++|+|||+|.+|+.+|..|+
T Consensus 33 ~~~v~IiGaG~~Gl~aA~~l~ 53 (498)
T 2iid_A 33 PKHVVIVGAGMAGLSAAYVLA 53 (498)
T ss_dssp CCEEEEECCBHHHHHHHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHH
Confidence 578999999999999999886
No 448
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=88.69 E-value=0.47 Score=42.82 Aligned_cols=35 Identities=20% Similarity=0.289 Sum_probs=31.6
Q ss_pred CCCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCC
Q psy4525 11 QLKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKL 47 (388)
Q Consensus 11 ~~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~ 47 (388)
...++|.|||+|..|..+|..++. .|.+|+++++.
T Consensus 153 l~g~~v~IiG~G~iG~~~a~~l~~--~G~~V~~~dr~ 187 (293)
T 3d4o_A 153 IHGANVAVLGLGRVGMSVARKFAA--LGAKVKVGARE 187 (293)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESS
T ss_pred CCCCEEEEEeeCHHHHHHHHHHHh--CCCEEEEEECC
Confidence 356899999999999999999998 89999999975
No 449
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=88.61 E-value=0.47 Score=42.97 Aligned_cols=35 Identities=17% Similarity=0.251 Sum_probs=31.7
Q ss_pred CCCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCC
Q psy4525 11 QLKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKL 47 (388)
Q Consensus 11 ~~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~ 47 (388)
...++|.|||+|..|..+|..+.. .|.+|+++++.
T Consensus 155 l~g~~v~IiG~G~iG~~~a~~l~~--~G~~V~~~d~~ 189 (300)
T 2rir_A 155 IHGSQVAVLGLGRTGMTIARTFAA--LGANVKVGARS 189 (300)
T ss_dssp STTSEEEEECCSHHHHHHHHHHHH--TTCEEEEEESS
T ss_pred CCCCEEEEEcccHHHHHHHHHHHH--CCCEEEEEECC
Confidence 356899999999999999999998 89999999975
No 450
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=88.58 E-value=0.4 Score=45.60 Aligned_cols=36 Identities=25% Similarity=0.240 Sum_probs=32.5
Q ss_pred CCCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCC
Q psy4525 11 QLKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLP 48 (388)
Q Consensus 11 ~~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~ 48 (388)
...++|+|||.|+.|..+|..++. .|.+|+++|+.+
T Consensus 218 L~GktV~ViG~G~IGk~vA~~Lra--~Ga~Viv~D~dp 253 (435)
T 3gvp_A 218 FGGKQVVVCGYGEVGKGCCAALKA--MGSIVYVTEIDP 253 (435)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSCH
T ss_pred ecCCEEEEEeeCHHHHHHHHHHHH--CCCEEEEEeCCh
Confidence 356899999999999999999999 899999999763
No 451
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=88.57 E-value=0.48 Score=45.84 Aligned_cols=34 Identities=21% Similarity=0.108 Sum_probs=31.0
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCC
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKL 47 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~ 47 (388)
..++|.|||+|..|...|..+.+ .|++|+++|++
T Consensus 36 ~~~kV~VIGaG~MG~~iA~~la~--~G~~V~l~D~~ 69 (463)
T 1zcj_A 36 PVSSVGVLGLGTMGRGIAISFAR--VGISVVAVESD 69 (463)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHT--TTCEEEEECSS
T ss_pred CCCEEEEECcCHHHHHHHHHHHh--CCCeEEEEECC
Confidence 34689999999999999999999 89999999976
No 452
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=88.43 E-value=0.34 Score=43.73 Aligned_cols=33 Identities=18% Similarity=0.319 Sum_probs=30.2
Q ss_pred CcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCC
Q psy4525 14 PNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLP 48 (388)
Q Consensus 14 ~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~ 48 (388)
++|+|||+|.-|.+.|..|.+ .|.+|++++|+.
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~--~g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQ--SLPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHH--HCTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHH--CCCeEEEEEecc
Confidence 589999999999999999998 789999999873
No 453
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=88.41 E-value=0.32 Score=46.01 Aligned_cols=44 Identities=11% Similarity=0.156 Sum_probs=34.3
Q ss_pred ceeEEEEecCcceeeeeCCCCceeEEEEccCccccCCceeEEecceEEEccccC
Q psy4525 270 SKYFRPIFLRSPTEFKLNDNGAITGINFANQQALVTEDTELIPSGIAFRSIGYQ 323 (388)
Q Consensus 270 ~~gv~~~~~~~~~~i~~~~~~~v~~v~~~~~~~~~~~~~~~l~~D~Vi~a~G~~ 323 (388)
+.|+++++++.+++|..+ ++++.++.. . ++++.||.||+|+|..
T Consensus 208 ~~G~~i~~~~~V~~i~~~-~~~~~gv~~--------~-g~~~~ad~VV~a~~~~ 251 (425)
T 3ka7_A 208 ANGGKIHTGQEVSKILIE-NGKAAGIIA--------D-DRIHDADLVISNLGHA 251 (425)
T ss_dssp HTTCEEECSCCEEEEEEE-TTEEEEEEE--------T-TEEEECSEEEECSCHH
T ss_pred HcCCEEEECCceeEEEEE-CCEEEEEEE--------C-CEEEECCEEEECCCHH
Confidence 457899999999999875 356666643 2 4579999999999864
No 454
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=88.36 E-value=0.46 Score=45.68 Aligned_cols=37 Identities=14% Similarity=0.117 Sum_probs=33.4
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCC
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVP 50 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~ 50 (388)
...++.|||.|.-|+..|..|.+ .|++|+++|+++..
T Consensus 7 ~~~~~~vIGlG~vG~~~A~~La~--~G~~V~~~D~~~~k 43 (446)
T 4a7p_A 7 GSVRIAMIGTGYVGLVSGACFSD--FGHEVVCVDKDARK 43 (446)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSCSTT
T ss_pred CceEEEEEcCCHHHHHHHHHHHH--CCCEEEEEeCCHHH
Confidence 34789999999999999999999 89999999998654
No 455
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=88.29 E-value=0.74 Score=41.61 Aligned_cols=34 Identities=21% Similarity=0.273 Sum_probs=30.8
Q ss_pred CCcEEEEC-ccHHHHHHHHHHHhhCCCCcEEEEcCCC
Q psy4525 13 KPNVCIVG-SGPAGFYCAQQILKLLPQSTVDIYEKLP 48 (388)
Q Consensus 13 ~~~vvIIG-aG~aGl~aA~~l~~~~~g~~v~lie~~~ 48 (388)
.++|.||| +|..|.+.|..|.+ .|.+|+++++.+
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~--~G~~V~~~~~~~ 55 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRA--SGYPISILDRED 55 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHT--TTCCEEEECTTC
T ss_pred CCEEEEEcCCCHHHHHHHHHHHh--CCCeEEEEECCc
Confidence 35899999 99999999999999 899999999764
No 456
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=88.28 E-value=0.49 Score=43.50 Aligned_cols=34 Identities=18% Similarity=0.306 Sum_probs=30.9
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCC
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKL 47 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~ 47 (388)
.+.+|.|||+|.-|...|..|.+ .|.+|+++++.
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~--~G~~V~~~~r~ 46 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHE--NGEEVILWARR 46 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSS
T ss_pred cCCcEEEECcCHHHHHHHHHHHh--CCCeEEEEeCC
Confidence 46799999999999999999999 89999999976
No 457
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=88.13 E-value=0.56 Score=42.72 Aligned_cols=33 Identities=12% Similarity=0.275 Sum_probs=28.8
Q ss_pred cEEEECccHHHHHHHHHHHhhCCCCcEEEEcCC
Q psy4525 15 NVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKL 47 (388)
Q Consensus 15 ~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~ 47 (388)
+|+|||+|..|...|..|.+...+.+|+++|+.
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~ 34 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVV 34 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 799999999999999999983236899999986
No 458
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=88.11 E-value=0.48 Score=43.54 Aligned_cols=34 Identities=15% Similarity=0.201 Sum_probs=29.3
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCC--cEEEEcCC
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQS--TVDIYEKL 47 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~--~v~lie~~ 47 (388)
...+|+|||+|..|.++|..|.. .+. +++++|..
T Consensus 4 ~~~kI~ViGaG~vG~~~a~~l~~--~~~~~~l~l~D~~ 39 (326)
T 3pqe_A 4 HVNKVALIGAGFVGSSYAFALIN--QGITDELVVIDVN 39 (326)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHH--HTCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHh--CCCCceEEEEecc
Confidence 34689999999999999999998 565 89999964
No 459
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=88.09 E-value=0.41 Score=45.89 Aligned_cols=48 Identities=19% Similarity=0.128 Sum_probs=37.0
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCceeeCCCCC
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLVRYGVAPD 61 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~~~g~~p~ 61 (388)
.+.+|+|||.|..|+.+|..+++ .|++|+.||-++.--..++.|..|-
T Consensus 20 ~m~~IaViGlGYVGLp~A~~~A~--~G~~V~g~Did~~kV~~ln~G~~pi 67 (444)
T 3vtf_A 20 HMASLSVLGLGYVGVVHAVGFAL--LGHRVVGYDVNPSIVERLRAGRPHI 67 (444)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH--HTCEEEEECSCHHHHHHHHTTCCSS
T ss_pred CCCEEEEEccCHHHHHHHHHHHh--CCCcEEEEECCHHHHHHHHCCCCCC
Confidence 45799999999999999999998 7999999997654323344444343
No 460
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=88.01 E-value=0.32 Score=41.82 Aligned_cols=33 Identities=21% Similarity=0.236 Sum_probs=29.9
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEE-EcCC
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDI-YEKL 47 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~l-ie~~ 47 (388)
..+|.|||+|..|...|..|.+ .|.+|++ ++++
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~--~g~~V~~v~~r~ 56 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTA--AQIPAIIANSRG 56 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHH--TTCCEEEECTTC
T ss_pred CCEEEEECCCHHHHHHHHHHHh--CCCEEEEEECCC
Confidence 4689999999999999999999 8999998 7776
No 461
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=87.92 E-value=0.2 Score=47.03 Aligned_cols=35 Identities=14% Similarity=0.165 Sum_probs=30.7
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCC-------CcEEEEcCCCC
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQ-------STVDIYEKLPV 49 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g-------~~v~lie~~~~ 49 (388)
.++|.|||+|..|.+.|..|.+ .| .+|+++++.+.
T Consensus 21 ~~kI~iIGaG~mG~alA~~L~~--~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 21 PLKISILGSGNWASAISKVVGT--NAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp CBCEEEECCSHHHHHHHHHHHH--HHHHCTTBCSCEEEECCSCC
T ss_pred CCEEEEECcCHHHHHHHHHHHH--cCCccCCCCCeEEEEECChh
Confidence 3589999999999999999998 67 89999998743
No 462
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=87.75 E-value=0.65 Score=42.23 Aligned_cols=33 Identities=21% Similarity=0.347 Sum_probs=30.3
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCC
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKL 47 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~ 47 (388)
..+|.|||+|..|...|..|.+ .|.+|+++++.
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~--~g~~V~~~~~~ 62 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLK--MGHTVTVWNRT 62 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHH--TTCCEEEECSS
T ss_pred CCeEEEEcccHHHHHHHHHHHh--CCCEEEEEeCC
Confidence 3689999999999999999998 89999999976
No 463
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=87.70 E-value=0.42 Score=42.64 Aligned_cols=34 Identities=21% Similarity=0.257 Sum_probs=31.0
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCC
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKL 47 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~ 47 (388)
..++++|+|+|-+|.+.|..|.+ .|.+|++++|.
T Consensus 118 ~~~~vlvlGaGg~g~a~a~~L~~--~G~~v~v~~R~ 151 (272)
T 1p77_A 118 PNQHVLILGAGGATKGVLLPLLQ--AQQNIVLANRT 151 (272)
T ss_dssp TTCEEEEECCSHHHHTTHHHHHH--TTCEEEEEESS
T ss_pred CCCEEEEECCcHHHHHHHHHHHH--CCCEEEEEECC
Confidence 45789999999999999999999 78999999986
No 464
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=87.52 E-value=0.75 Score=41.74 Aligned_cols=35 Identities=31% Similarity=0.547 Sum_probs=31.8
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCC
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLP 48 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~ 48 (388)
..++|.|||.|..|...|..|.+ .|++|+++|+.+
T Consensus 8 ~~~~IgiIG~G~mG~~~A~~l~~--~G~~V~~~dr~~ 42 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGTIMAQVLLK--QGKRVAIWNRSP 42 (306)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHH--TTCCEEEECSSH
T ss_pred CCCeEEEECCCHHHHHHHHHHHH--CCCEEEEEeCCH
Confidence 45789999999999999999999 899999999874
No 465
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=87.43 E-value=0.52 Score=43.11 Aligned_cols=33 Identities=12% Similarity=0.425 Sum_probs=30.7
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCC
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKL 47 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~ 47 (388)
.++|.|||.|..|...|..|.+ .|++|+++|+.
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~--~G~~V~~~dr~ 63 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCE--AGYALQVWNRT 63 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHH--TTCEEEEECSC
T ss_pred CCEEEEECccHHHHHHHHHHHh--CCCeEEEEcCC
Confidence 4689999999999999999999 89999999976
No 466
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=87.40 E-value=0.48 Score=42.80 Aligned_cols=33 Identities=18% Similarity=0.403 Sum_probs=30.5
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCC
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKL 47 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~ 47 (388)
.++|.|||+|..|...|..|.+ .|++|+++++.
T Consensus 3 m~~I~iiG~G~mG~~~a~~l~~--~G~~V~~~d~~ 35 (302)
T 2h78_A 3 MKQIAFIGLGHMGAPMATNLLK--AGYLLNVFDLV 35 (302)
T ss_dssp CCEEEEECCSTTHHHHHHHHHH--TTCEEEEECSS
T ss_pred CCEEEEEeecHHHHHHHHHHHh--CCCeEEEEcCC
Confidence 3689999999999999999999 89999999976
No 467
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=87.39 E-value=0.7 Score=42.52 Aligned_cols=35 Identities=23% Similarity=0.470 Sum_probs=30.2
Q ss_pred CCCCcEEEECccHHHHHHHHHHHhhCCCC--cEEEEcCC
Q psy4525 11 QLKPNVCIVGSGPAGFYCAQQILKLLPQS--TVDIYEKL 47 (388)
Q Consensus 11 ~~~~~vvIIGaG~aGl~aA~~l~~~~~g~--~v~lie~~ 47 (388)
....+|+|||+|..|.+.|..+.. .+. +++++|..
T Consensus 17 ~~~~kV~ViGaG~vG~~~a~~l~~--~~~~~el~L~Di~ 53 (331)
T 4aj2_A 17 VPQNKITVVGVGAVGMACAISILM--KDLADELALVDVI 53 (331)
T ss_dssp CCSSEEEEECCSHHHHHHHHHHHH--TTCCSEEEEECSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHh--CCCCceEEEEeCC
Confidence 456899999999999999999998 665 89999964
No 468
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=87.37 E-value=0.61 Score=37.49 Aligned_cols=38 Identities=21% Similarity=0.225 Sum_probs=29.1
Q ss_pred cCCCCCeEEEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecC
Q psy4525 148 LSLDCEEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRG 206 (388)
Q Consensus 148 ~~~~~~~vvVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~ 206 (388)
....+++|+|+|+|.+|..+|..|. ..+. +|+++.|++
T Consensus 15 ~~~~~~~v~IiG~G~iG~~la~~L~--------------------~~g~-~V~vid~~~ 52 (155)
T 2g1u_A 15 KKQKSKYIVIFGCGRLGSLIANLAS--------------------SSGH-SVVVVDKNE 52 (155)
T ss_dssp --CCCCEEEEECCSHHHHHHHHHHH--------------------HTTC-EEEEEESCG
T ss_pred cccCCCcEEEECCCHHHHHHHHHHH--------------------hCCC-eEEEEECCH
Confidence 3445789999999999999999775 3443 799988764
No 469
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=87.37 E-value=0.58 Score=41.79 Aligned_cols=37 Identities=19% Similarity=0.274 Sum_probs=29.9
Q ss_pred CCCCCeEEEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecC
Q psy4525 149 SLDCEEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRG 206 (388)
Q Consensus 149 ~~~~~~vvVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~ 206 (388)
..++++|+|||||.+|...+..|. +.|+ +|+++....
T Consensus 10 ~l~~k~VLVVGgG~va~rka~~Ll--------------------~~Ga-~VtViap~~ 46 (274)
T 1kyq_A 10 QLKDKRILLIGGGEVGLTRLYKLM--------------------PTGC-KLTLVSPDL 46 (274)
T ss_dssp CCTTCEEEEEEESHHHHHHHHHHG--------------------GGTC-EEEEEEEEE
T ss_pred EcCCCEEEEECCcHHHHHHHHHHH--------------------hCCC-EEEEEcCCC
Confidence 346899999999999999999876 3454 699998653
No 470
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=87.34 E-value=0.36 Score=46.16 Aligned_cols=33 Identities=18% Similarity=0.361 Sum_probs=28.2
Q ss_pred CeEEEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecC
Q psy4525 153 EEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRG 206 (388)
Q Consensus 153 ~~vvVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~ 206 (388)
++|+|||||.+|+-+|..|+ +.|. +|+++.++.
T Consensus 23 ~~ViIVGaGpaGl~~A~~La--------------------~~G~-~V~viE~~~ 55 (430)
T 3ihm_A 23 KRIGIVGAGTAGLHLGLFLR--------------------QHDV-DVTVYTDRK 55 (430)
T ss_dssp CEEEEECCHHHHHHHHHHHH--------------------HTTC-EEEEEESCC
T ss_pred CCEEEECCcHHHHHHHHHHH--------------------HCCC-eEEEEcCCC
Confidence 68999999999999999886 3454 799999876
No 471
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=87.32 E-value=0.4 Score=43.03 Aligned_cols=33 Identities=18% Similarity=0.315 Sum_probs=30.3
Q ss_pred CcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCC
Q psy4525 14 PNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLP 48 (388)
Q Consensus 14 ~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~ 48 (388)
++|.|||.|..|...|..|.+ .|++|+++|+++
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~--~G~~V~~~dr~~ 34 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVR--AGFDVTVWNRNP 34 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHH--HTCCEEEECSSG
T ss_pred CeEEEEccCHHHHHHHHHHHH--CCCeEEEEcCCH
Confidence 479999999999999999999 799999999873
No 472
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=87.31 E-value=0.59 Score=42.68 Aligned_cols=33 Identities=21% Similarity=0.344 Sum_probs=28.8
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCC
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKL 47 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~ 47 (388)
..++|+|||+|.-|.+.|..|.+ .|.+|+++ +.
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~--~G~~V~l~-~~ 50 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLAR--AGHEVILI-AR 50 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHH--TTCEEEEE-CC
T ss_pred cCCcEEEECcCHHHHHHHHHHHH--CCCeEEEE-Ec
Confidence 35789999999999999999999 89999999 55
No 473
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=87.30 E-value=0.35 Score=45.23 Aligned_cols=35 Identities=14% Similarity=0.255 Sum_probs=28.1
Q ss_pred CeEEEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcC--CCcEEEEEeecCcc
Q psy4525 153 EEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTS--RIKSVNLVGRRGAL 208 (388)
Q Consensus 153 ~~vvVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~--~~~~V~~i~r~~~~ 208 (388)
.+|+|||||.+|+-+|..|+ +. | .+|++++|.+..
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~--------------------~~~~G-~~V~v~E~~~~~ 37 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLK--------------------QARPL-WAIDIVEKNDEQ 37 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHH--------------------HHCTT-SEEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHH--------------------hcCCC-CCEEEEECCCCC
Confidence 36999999999999999886 22 3 479999987654
No 474
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=87.29 E-value=0.63 Score=45.02 Aligned_cols=35 Identities=20% Similarity=0.197 Sum_probs=31.8
Q ss_pred CCCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCC
Q psy4525 11 QLKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKL 47 (388)
Q Consensus 11 ~~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~ 47 (388)
...+.++|+|+|..|..+|..|+. .|.+|+++|+.
T Consensus 263 L~GKtVvVtGaGgIG~aiA~~Laa--~GA~Viv~D~~ 297 (488)
T 3ond_A 263 IAGKVAVVAGYGDVGKGCAAALKQ--AGARVIVTEID 297 (488)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSC
T ss_pred ccCCEEEEECCCHHHHHHHHHHHH--CCCEEEEEcCC
Confidence 356899999999999999999999 89999999875
No 475
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=87.29 E-value=0.51 Score=42.89 Aligned_cols=35 Identities=17% Similarity=0.299 Sum_probs=29.2
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCC--cEEEEcCCC
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQS--TVDIYEKLP 48 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~--~v~lie~~~ 48 (388)
..++|+|||+|..|...|..+.. .+. +++++|...
T Consensus 13 ~~~kV~ViGaG~vG~~~a~~l~~--~g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 13 TVNKITVVGGGELGIACTLAISA--KGIADRLVLLDLSE 49 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHH--HTCCSEEEEECCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHh--cCCCCEEEEEcCCc
Confidence 45789999999999999999988 666 899999763
No 476
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=87.27 E-value=0.41 Score=45.36 Aligned_cols=21 Identities=19% Similarity=0.297 Sum_probs=19.0
Q ss_pred CCeEEEEcCChHHHHHHHHhc
Q psy4525 152 CEEATILGQGNVAMDVARILL 172 (388)
Q Consensus 152 ~~~vvVIGgG~sg~e~a~~L~ 172 (388)
..+|+|||+|.+|+-+|..|+
T Consensus 6 ~~~v~IIGaG~aGl~aA~~L~ 26 (424)
T 2b9w_A 6 DSRIAIIGAGPAGLAAGMYLE 26 (424)
T ss_dssp TCCEEEECCSHHHHHHHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHH
Confidence 468999999999999999886
No 477
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=87.23 E-value=0.64 Score=43.33 Aligned_cols=35 Identities=14% Similarity=0.206 Sum_probs=31.5
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCC
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLP 48 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~ 48 (388)
..++|.|||.|..|...|..|.+ .|++|+++|+.+
T Consensus 21 ~~mkIgiIGlG~mG~~~A~~L~~--~G~~V~v~dr~~ 55 (358)
T 4e21_A 21 QSMQIGMIGLGRMGADMVRRLRK--GGHECVVYDLNV 55 (358)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSCH
T ss_pred cCCEEEEECchHHHHHHHHHHHh--CCCEEEEEeCCH
Confidence 35789999999999999999999 899999999873
No 478
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=87.22 E-value=0.82 Score=44.01 Aligned_cols=36 Identities=17% Similarity=0.238 Sum_probs=28.8
Q ss_pred CCCCeEEEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecC
Q psy4525 150 LDCEEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRG 206 (388)
Q Consensus 150 ~~~~~vvVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~ 206 (388)
+.+++|.|||.|.+|+-+|..|. +.| .+|++..++.
T Consensus 7 ~~~k~v~viG~G~sG~s~A~~l~--------------------~~G-~~V~~~D~~~ 42 (451)
T 3lk7_A 7 FENKKVLVLGLARSGEAAARLLA--------------------KLG-AIVTVNDGKP 42 (451)
T ss_dssp TTTCEEEEECCTTTHHHHHHHHH--------------------HTT-CEEEEEESSC
T ss_pred cCCCEEEEEeeCHHHHHHHHHHH--------------------hCC-CEEEEEeCCc
Confidence 45899999999999999988775 345 4699987754
No 479
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=87.10 E-value=0.66 Score=36.49 Aligned_cols=35 Identities=23% Similarity=0.204 Sum_probs=27.6
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEE-EEcCC
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVD-IYEKL 47 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~-lie~~ 47 (388)
..++++|||+|..|..++..+.+. ++++++ ++|..
T Consensus 3 ~~~~vlIiGaG~~g~~l~~~l~~~-~g~~vvg~~d~~ 38 (141)
T 3nkl_A 3 AKKKVLIYGAGSAGLQLANMLRQG-KEFHPIAFIDDD 38 (141)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHS-SSEEEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-CCcEEEEEEECC
Confidence 457899999999999999999873 477765 55544
No 480
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=87.07 E-value=0.71 Score=41.49 Aligned_cols=34 Identities=18% Similarity=0.173 Sum_probs=30.6
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCC-cEEEEcCC
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQS-TVDIYEKL 47 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~-~v~lie~~ 47 (388)
..++++|+|+|-+|.+++..|.+ .|. +|++++|.
T Consensus 126 ~~k~vlVlGaGG~g~aia~~L~~--~G~~~v~i~~R~ 160 (283)
T 3jyo_A 126 KLDSVVQVGAGGVGNAVAYALVT--HGVQKLQVADLD 160 (283)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHH--TTCSEEEEECSS
T ss_pred CCCEEEEECCcHHHHHHHHHHHH--CCCCEEEEEECC
Confidence 46899999999999999999999 898 69999876
No 481
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=87.02 E-value=0.74 Score=34.55 Aligned_cols=34 Identities=24% Similarity=0.286 Sum_probs=27.7
Q ss_pred CCeEEEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeec
Q psy4525 152 CEEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRR 205 (388)
Q Consensus 152 ~~~vvVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~ 205 (388)
.++|+|+|+|.+|..++..|. +.+..+|+++.|+
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~--------------------~~g~~~v~~~~r~ 38 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLK--------------------TSSNYSVTVADHD 38 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHH--------------------HCSSEEEEEEESC
T ss_pred cCeEEEECCCHHHHHHHHHHH--------------------hCCCceEEEEeCC
Confidence 468999999999999999775 3454579888886
No 482
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=87.02 E-value=0.56 Score=41.68 Aligned_cols=33 Identities=6% Similarity=-0.055 Sum_probs=30.5
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCC
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKL 47 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~ 47 (388)
+++|+|.|+|..|..++..|.+ .|++|+++.|.
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~--~g~~V~~~~r~ 37 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAP--QGWRIIGTSRN 37 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGG--GTCEEEEEESC
T ss_pred cCcEEEECCcHHHHHHHHHHHH--CCCEEEEEEcC
Confidence 3689999999999999999999 79999999886
No 483
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=86.99 E-value=0.47 Score=45.47 Aligned_cols=32 Identities=22% Similarity=0.218 Sum_probs=29.8
Q ss_pred cEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCC
Q psy4525 15 NVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLP 48 (388)
Q Consensus 15 ~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~ 48 (388)
+|.|||+|..|+..|..|.+ .|.+|+++|+++
T Consensus 2 kI~VIG~G~vG~~~A~~la~--~G~~V~~~d~~~ 33 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSA--RGHEVIGVDVSS 33 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHH--TTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHH--CCCEEEEEECCH
Confidence 69999999999999999999 899999999864
No 484
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=86.91 E-value=0.63 Score=41.65 Aligned_cols=35 Identities=20% Similarity=0.218 Sum_probs=31.4
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCC-cEEEEcCCC
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQS-TVDIYEKLP 48 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~-~v~lie~~~ 48 (388)
..++++|||+|-+|.+++..|.+ .|. +|++++|..
T Consensus 116 ~~k~vlvlGaGg~g~aia~~L~~--~G~~~v~v~~R~~ 151 (277)
T 3don_A 116 EDAYILILGAGGASKGIANELYK--IVRPTLTVANRTM 151 (277)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHT--TCCSCCEEECSCG
T ss_pred CCCEEEEECCcHHHHHHHHHHHH--CCCCEEEEEeCCH
Confidence 35799999999999999999999 898 899999873
No 485
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=86.82 E-value=0.8 Score=38.16 Aligned_cols=33 Identities=18% Similarity=0.341 Sum_probs=30.3
Q ss_pred CcEEEECc-cHHHHHHHHHHHhhCCCCcEEEEcCCC
Q psy4525 14 PNVCIVGS-GPAGFYCAQQILKLLPQSTVDIYEKLP 48 (388)
Q Consensus 14 ~~vvIIGa-G~aGl~aA~~l~~~~~g~~v~lie~~~ 48 (388)
++|+|+|| |..|..++..|.+ .|.+|++++|.+
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~--~g~~V~~~~r~~ 37 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQ--AGYEVTVLVRDS 37 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHH--TTCEEEEEESCG
T ss_pred CEEEEEcCCcHHHHHHHHHHHH--CCCeEEEEEeCh
Confidence 68999998 9999999999999 899999999873
No 486
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=86.79 E-value=0.81 Score=42.03 Aligned_cols=34 Identities=18% Similarity=0.275 Sum_probs=29.8
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCC--cEEEEcCC
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQS--TVDIYEKL 47 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~--~v~lie~~ 47 (388)
...+|+|||+|..|.++|..+.. .+. +++++|..
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~--~g~~~ev~L~Di~ 55 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLM--KDLADEVALVDVM 55 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHH--HCCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHh--CCCCCeEEEEECC
Confidence 45799999999999999999998 565 89999965
No 487
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=86.73 E-value=0.71 Score=42.15 Aligned_cols=34 Identities=18% Similarity=0.254 Sum_probs=30.9
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCC-cEEEEcCC
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQS-TVDIYEKL 47 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~-~v~lie~~ 47 (388)
..++++|+|+|-+|.++|..|.+ .|. +|++++|.
T Consensus 153 ~gk~~lVlGaGG~g~aia~~L~~--~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 153 IGKKMTICGAGGAATAICIQAAL--DGVKEISIFNRK 187 (315)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHH--TTCSEEEEEECS
T ss_pred cCCEEEEECCChHHHHHHHHHHH--CCCCEEEEEECC
Confidence 46899999999999999999999 898 89999986
No 488
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=86.70 E-value=0.52 Score=47.48 Aligned_cols=40 Identities=33% Similarity=0.502 Sum_probs=36.4
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCCCCCCce
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLPVPFGLV 54 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~~~gg~~ 54 (388)
.+||+|||||++|+++|..|++ .|++|+|+|+.+..+|.+
T Consensus 46 ~~dvvIIG~G~aGl~aA~~l~~--~G~~V~liE~~~~~gg~~ 85 (623)
T 3pl8_A 46 KYDVVIVGSGPIGCTYARELVG--AGYKVAMFDIGEIDSGLK 85 (623)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSCCCSSSS
T ss_pred cCCEEEECCcHHHHHHHHHHHh--CCCcEEEEeccCCCCCcc
Confidence 4799999999999999999999 899999999998877643
No 489
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=86.70 E-value=0.46 Score=46.51 Aligned_cols=21 Identities=24% Similarity=0.379 Sum_probs=19.0
Q ss_pred CCeEEEEcCChHHHHHHHHhc
Q psy4525 152 CEEATILGQGNVAMDVARILL 172 (388)
Q Consensus 152 ~~~vvVIGgG~sg~e~a~~L~ 172 (388)
..+|+|||+|.+|+-+|..|.
T Consensus 8 ~~~VvIIGaG~aGL~AA~~L~ 28 (516)
T 1rsg_A 8 KKKVIIIGAGIAGLKAASTLH 28 (516)
T ss_dssp EEEEEEECCBHHHHHHHHHHH
T ss_pred CCcEEEECCCHHHHHHHHHHH
Confidence 358999999999999999886
No 490
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=86.66 E-value=0.64 Score=42.67 Aligned_cols=34 Identities=21% Similarity=0.291 Sum_probs=29.3
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCC--cEEEEcCC
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQS--TVDIYEKL 47 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~--~v~lie~~ 47 (388)
...+|+|||+|..|.++|..|.. .+. +++++|..
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~--~~~~~el~l~D~~ 43 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVL--QGIAQEIGIVDIF 43 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH--HTCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHh--CCCCCeEEEEeCC
Confidence 45799999999999999999998 555 89999964
No 491
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=86.65 E-value=0.5 Score=44.67 Aligned_cols=33 Identities=27% Similarity=0.388 Sum_probs=27.4
Q ss_pred CeEEEEcCChHHHHHHHHhccCCcccccccCchhHHHhhhcCCCcEEEEEeecC
Q psy4525 153 EEATILGQGNVAMDVARILLSPVDQLKSTDITEHSLEKLSTSRIKSVNLVGRRG 206 (388)
Q Consensus 153 ~~vvVIGgG~sg~e~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~r~~ 206 (388)
++|+|||||..|++.|..++ +.|. +|+++.+++
T Consensus 2 ~dViVIGgG~AG~~AA~~la--------------------~~G~-~V~liE~~~ 34 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLL--------------------RLGV-PVRLFEMRP 34 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHH--------------------HTTC-CEEEECCTT
T ss_pred CCEEEECchHHHHHHHHHHH--------------------HCCC-cEEEEeccC
Confidence 46999999999999999886 3454 699999775
No 492
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=86.64 E-value=0.71 Score=44.93 Aligned_cols=35 Identities=26% Similarity=0.246 Sum_probs=31.9
Q ss_pred CCCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCC
Q psy4525 11 QLKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKL 47 (388)
Q Consensus 11 ~~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~ 47 (388)
...++|+|||.|..|..+|..++. .|.+|+++|+.
T Consensus 272 l~GktV~IiG~G~IG~~~A~~lka--~Ga~Viv~d~~ 306 (494)
T 3ce6_A 272 IGGKKVLICGYGDVGKGCAEAMKG--QGARVSVTEID 306 (494)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSC
T ss_pred CCcCEEEEEccCHHHHHHHHHHHH--CCCEEEEEeCC
Confidence 457899999999999999999999 89999999975
No 493
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=86.63 E-value=0.31 Score=42.25 Aligned_cols=33 Identities=15% Similarity=0.218 Sum_probs=28.8
Q ss_pred CCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCC
Q psy4525 12 LKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKL 47 (388)
Q Consensus 12 ~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~ 47 (388)
...+++|+|+|..|...|..|.+ .|. |+++|++
T Consensus 8 ~~~~viI~G~G~~G~~la~~L~~--~g~-v~vid~~ 40 (234)
T 2aef_A 8 KSRHVVICGWSESTLECLRELRG--SEV-FVLAEDE 40 (234)
T ss_dssp --CEEEEESCCHHHHHHHHHSTT--SEE-EEEESCG
T ss_pred CCCEEEEECCChHHHHHHHHHHh--CCe-EEEEECC
Confidence 35689999999999999999998 788 9999976
No 494
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=86.63 E-value=0.7 Score=39.15 Aligned_cols=31 Identities=16% Similarity=0.213 Sum_probs=28.7
Q ss_pred cEEEEC-ccHHHHHHHHHHHhhCCCCcEEEEcCC
Q psy4525 15 NVCIVG-SGPAGFYCAQQILKLLPQSTVDIYEKL 47 (388)
Q Consensus 15 ~vvIIG-aG~aGl~aA~~l~~~~~g~~v~lie~~ 47 (388)
+|+||| +|..|...|..|.+ .|.+|++++++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~--~g~~V~~~~r~ 33 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLAT--LGHEIVVGSRR 33 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHT--TTCEEEEEESS
T ss_pred eEEEEcCCCHHHHHHHHHHHH--CCCEEEEEeCC
Confidence 689999 99999999999998 89999999976
No 495
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=86.62 E-value=0.65 Score=39.60 Aligned_cols=34 Identities=18% Similarity=0.262 Sum_probs=30.7
Q ss_pred CCcEEEECc-cHHHHHHHHHHHhhCCCCcEEEEcCCC
Q psy4525 13 KPNVCIVGS-GPAGFYCAQQILKLLPQSTVDIYEKLP 48 (388)
Q Consensus 13 ~~~vvIIGa-G~aGl~aA~~l~~~~~g~~v~lie~~~ 48 (388)
+++|+|.|| |..|..++..|.+ .|.+|++++|.+
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~--~g~~V~~~~r~~ 38 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALN--RGFEVTAVVRHP 38 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHT--TTCEEEEECSCG
T ss_pred CCEEEEEcCCchHHHHHHHHHHH--CCCEEEEEEcCc
Confidence 368999996 9999999999999 899999999874
No 496
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=86.58 E-value=0.91 Score=41.97 Aligned_cols=34 Identities=24% Similarity=0.359 Sum_probs=28.9
Q ss_pred CCCcEEEECc-cHHHHHHHHHHHhhCCC--CcEEEEcCC
Q psy4525 12 LKPNVCIVGS-GPAGFYCAQQILKLLPQ--STVDIYEKL 47 (388)
Q Consensus 12 ~~~~vvIIGa-G~aGl~aA~~l~~~~~g--~~v~lie~~ 47 (388)
..++|+|||+ |..|.++|..+.. .| .+++++|..
T Consensus 7 ~~~KV~ViGaaG~VG~~~a~~l~~--~g~~~evvLiDi~ 43 (343)
T 3fi9_A 7 TEEKLTIVGAAGMIGSNMAQTAAM--MRLTPNLCLYDPF 43 (343)
T ss_dssp CSSEEEEETTTSHHHHHHHHHHHH--TTCCSCEEEECSC
T ss_pred CCCEEEEECCCChHHHHHHHHHHh--cCCCCEEEEEeCC
Confidence 3468999998 9999999999988 56 489999964
No 497
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=86.57 E-value=0.57 Score=42.20 Aligned_cols=33 Identities=24% Similarity=0.335 Sum_probs=29.9
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCC
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKL 47 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~ 47 (388)
+.+|.|||+|..|...|..|.+ .|++|+++++.
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~--~g~~V~~~~~~ 36 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLK--EGVTVYAFDLM 36 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHH--TTCEEEEECSS
T ss_pred CCEEEEECccHHHHHHHHHHHH--CCCeEEEEeCC
Confidence 3589999999999999999998 79999999875
No 498
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=86.46 E-value=0.64 Score=44.03 Aligned_cols=36 Identities=14% Similarity=0.175 Sum_probs=31.4
Q ss_pred ccCCCCCcEEEECccHHHHHHHHHHHhhCCCCcEEEEc
Q psy4525 8 TISQLKPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYE 45 (388)
Q Consensus 8 ~~~~~~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie 45 (388)
.++++.++|.|+|+|..|...+..+++ .|++++++|
T Consensus 19 ~~mm~~~~I~ilGgG~lg~~l~~aa~~--lG~~v~~~d 54 (403)
T 3k5i_A 19 GHMWNSRKVGVLGGGQLGRMLVESANR--LNIQVNVLD 54 (403)
T ss_dssp --CCSCCEEEEECCSHHHHHHHHHHHH--HTCEEEEEE
T ss_pred ccCCCCCEEEEECCCHHHHHHHHHHHH--CCCEEEEEE
Confidence 344567899999999999999999999 899999999
No 499
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=86.41 E-value=0.81 Score=41.65 Aligned_cols=32 Identities=16% Similarity=0.304 Sum_probs=28.5
Q ss_pred CcEEEECccHHHHHHHHHHHhhCCCC-cEEEEcCC
Q psy4525 14 PNVCIVGSGPAGFYCAQQILKLLPQS-TVDIYEKL 47 (388)
Q Consensus 14 ~~vvIIGaG~aGl~aA~~l~~~~~g~-~v~lie~~ 47 (388)
.+|+|||+|..|...|..+.. .+. +++++|..
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~--~g~~~v~L~Di~ 35 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAA--KELGDIVLLDIV 35 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--TTCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHH--CCCCeEEEEeCC
Confidence 589999999999999999998 675 89999975
No 500
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=86.41 E-value=0.55 Score=45.69 Aligned_cols=36 Identities=25% Similarity=0.249 Sum_probs=30.8
Q ss_pred CCcEEEECccHHHHHHHHHHHhhCCCCcEEEEcCCC
Q psy4525 13 KPNVCIVGSGPAGFYCAQQILKLLPQSTVDIYEKLP 48 (388)
Q Consensus 13 ~~~vvIIGaG~aGl~aA~~l~~~~~g~~v~lie~~~ 48 (388)
..+|.|||+|..|+..|..|.+...|++|+++|+++
T Consensus 9 ~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 9 VSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNT 44 (481)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 468999999999999999999932278999999764
Done!