BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4531
(88 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q28F21|SCAM5_XENTR Secretory carrier-associated membrane protein 5 OS=Xenopus
tropicalis GN=scamp5 PE=2 SV=1
Length = 231
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 53/78 (67%)
Query: 10 VNILGSLLLMMHSGEIERVFLAVFFTFLLTPFSFVCWFRPAYKAFKDDSSFNFMVFFFIF 69
VN++G L M+ G LA+ + L TP S+VCWFRPAYKAFK DSSFNFM FFF F
Sbjct: 53 VNLIGCLAWMIGGGGAINFGLAILWVILFTPCSYVCWFRPAYKAFKTDSSFNFMAFFFTF 112
Query: 70 IFQFIVSLIQAIGTQGSG 87
Q ++S+IQA+G G G
Sbjct: 113 SAQLVISIIQAVGIPGWG 130
>sp|Q6P0C7|SCAM5_DANRE Secretory carrier-associated membrane protein 5 OS=Danio rerio
GN=scamp5 PE=2 SV=1
Length = 230
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 56/85 (65%)
Query: 3 IHAGLMLVNILGSLLLMMHSGEIERVFLAVFFTFLLTPFSFVCWFRPAYKAFKDDSSFNF 62
+++ + VN++G L M G +A+ + L TP S+VCWFRP YKAFK DSSFNF
Sbjct: 43 LNSATLAVNLIGCLAWMCGGGGATNFGMAILWLILFTPCSYVCWFRPIYKAFKSDSSFNF 102
Query: 63 MVFFFIFIFQFIVSLIQAIGTQGSG 87
M FFF+F+ Q ++S+IQ +G G G
Sbjct: 103 MAFFFVFMAQVVISIIQTVGIPGWG 127
>sp|Q6GPA8|SCM5A_XENLA Secretory carrier-associated membrane protein 5A OS=Xenopus laevis
GN=scamp5-a PE=2 SV=1
Length = 235
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 51/78 (65%)
Query: 10 VNILGSLLLMMHSGEIERVFLAVFFTFLLTPFSFVCWFRPAYKAFKDDSSFNFMVFFFIF 69
VN++G L ++ G LA + L TP S+VCWFRP YKAFK DSSFNFM FFF F
Sbjct: 53 VNLIGCLAWLIGGGSATNFGLAFLWLILFTPCSYVCWFRPIYKAFKTDSSFNFMAFFFTF 112
Query: 70 IFQFIVSLIQAIGTQGSG 87
Q ++S+IQA+G G G
Sbjct: 113 TAQLVISIIQAVGIPGWG 130
>sp|Q6GM42|SCM5B_XENLA Secretory carrier-associated membrane protein 5B OS=Xenopus laevis
GN=scamp5-b PE=2 SV=1
Length = 235
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 51/78 (65%)
Query: 10 VNILGSLLLMMHSGEIERVFLAVFFTFLLTPFSFVCWFRPAYKAFKDDSSFNFMVFFFIF 69
VN++G L ++ G LA + L TP S+VCWFRP YKAFK DSSFNFM FFF F
Sbjct: 53 VNLIGCLAWLIGGGGATNFGLAFLWLILFTPCSYVCWFRPIYKAFKTDSSFNFMAFFFTF 112
Query: 70 IFQFIVSLIQAIGTQGSG 87
Q ++S+IQA+G G G
Sbjct: 113 TGQLVISIIQAVGIPGWG 130
>sp|Q9JKV5|SCAM4_MOUSE Secretory carrier-associated membrane protein 4 OS=Mus musculus
GN=Scamp4 PE=2 SV=1
Length = 230
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 53/79 (67%)
Query: 10 VNILGSLLLMMHSGEIERVFLAVFFTFLLTPFSFVCWFRPAYKAFKDDSSFNFMVFFFIF 69
VN++ L + G LA+ + L TP S+VCWFRPAYKAF+ DSSFNFM FFFIF
Sbjct: 53 VNLVACLAWWIAGGAGANFGLALLWLVLFTPCSYVCWFRPAYKAFRADSSFNFMTFFFIF 112
Query: 70 IFQFIVSLIQAIGTQGSGT 88
QF++++IQAIG G G
Sbjct: 113 GAQFVLTVIQAIGFSGWGA 131
>sp|Q9ET20|SCAM4_RAT Secretory carrier-associated membrane protein 4 OS=Rattus
norvegicus GN=Scamp4 PE=2 SV=1
Length = 230
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 53/79 (67%)
Query: 10 VNILGSLLLMMHSGEIERVFLAVFFTFLLTPFSFVCWFRPAYKAFKDDSSFNFMVFFFIF 69
VN++ L + G LA+ + L TP S+VCWFRPAYKAF+ DSSFNFM FFFIF
Sbjct: 53 VNLVACLAWWIAGGAGANFGLAMLWLVLFTPCSYVCWFRPAYKAFRADSSFNFMAFFFIF 112
Query: 70 IFQFIVSLIQAIGTQGSGT 88
QF++++IQAIG G G
Sbjct: 113 GAQFVLTVIQAIGFSGWGA 131
>sp|Q5R5Z8|SCAM5_PONAB Secretory carrier-associated membrane protein 5 OS=Pongo abelii
GN=SCAMP5 PE=2 SV=1
Length = 235
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 53/80 (66%)
Query: 8 MLVNILGSLLLMMHSGEIERVFLAVFFTFLLTPFSFVCWFRPAYKAFKDDSSFNFMVFFF 67
+ VN++G L ++ G LA + L TP S+VCWFRP YKAFK DSSF+FM FFF
Sbjct: 51 LAVNLVGCLAWLIGGGGATNFGLAFLWLILFTPCSYVCWFRPIYKAFKTDSSFSFMAFFF 110
Query: 68 IFIFQFIVSLIQAIGTQGSG 87
F+ Q ++S+IQA+G G G
Sbjct: 111 TFMAQLVISIIQAVGIPGWG 130
>sp|Q9JKE3|SCAM5_RAT Secretory carrier-associated membrane protein 5 OS=Rattus
norvegicus GN=Scamp5 PE=2 SV=1
Length = 235
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 53/80 (66%)
Query: 8 MLVNILGSLLLMMHSGEIERVFLAVFFTFLLTPFSFVCWFRPAYKAFKDDSSFNFMVFFF 67
+ VN++G L ++ G LA + L TP S+VCWFRP YKAFK DSSF+FM FFF
Sbjct: 51 LAVNLVGCLAWLIGGGGATNFGLAFLWLILFTPCSYVCWFRPIYKAFKTDSSFSFMAFFF 110
Query: 68 IFIFQFIVSLIQAIGTQGSG 87
F+ Q ++S+IQA+G G G
Sbjct: 111 TFMAQLVISIIQAVGIPGWG 130
>sp|Q9JKD3|SCAM5_MOUSE Secretory carrier-associated membrane protein 5 OS=Mus musculus
GN=Scamp5 PE=2 SV=1
Length = 235
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 53/80 (66%)
Query: 8 MLVNILGSLLLMMHSGEIERVFLAVFFTFLLTPFSFVCWFRPAYKAFKDDSSFNFMVFFF 67
+ VN++G L ++ G LA + L TP S+VCWFRP YKAFK DSSF+FM FFF
Sbjct: 51 LAVNLVGCLAWLIGGGGATNFGLAFLWLILFTPCSYVCWFRPIYKAFKTDSSFSFMAFFF 110
Query: 68 IFIFQFIVSLIQAIGTQGSG 87
F+ Q ++S+IQA+G G G
Sbjct: 111 TFMAQLVISIIQAVGIPGWG 130
>sp|Q17QF8|SCAM5_BOVIN Secretory carrier-associated membrane protein 5 OS=Bos taurus
GN=SCAMP5 PE=2 SV=2
Length = 235
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 53/80 (66%)
Query: 8 MLVNILGSLLLMMHSGEIERVFLAVFFTFLLTPFSFVCWFRPAYKAFKDDSSFNFMVFFF 67
+ VN++G L ++ G LA + L TP S+VCWFRP YKAFK DSSF+FM FFF
Sbjct: 51 LAVNLVGCLAWLIGGGGATNFGLAFLWLILFTPCSYVCWFRPIYKAFKTDSSFSFMAFFF 110
Query: 68 IFIFQFIVSLIQAIGTQGSG 87
F+ Q ++S+IQA+G G G
Sbjct: 111 TFMAQLVISIIQAVGIPGWG 130
>sp|Q8TAC9|SCAM5_HUMAN Secretory carrier-associated membrane protein 5 OS=Homo sapiens
GN=SCAMP5 PE=1 SV=1
Length = 235
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 53/80 (66%)
Query: 8 MLVNILGSLLLMMHSGEIERVFLAVFFTFLLTPFSFVCWFRPAYKAFKDDSSFNFMVFFF 67
+ VN++G L ++ G LA + L TP S+VCWFRP YKAFK DSSF+FM FFF
Sbjct: 51 LAVNLVGCLAWLIGGGGATNFGLAFLWLILFTPCSYVCWFRPIYKAFKTDSSFSFMAFFF 110
Query: 68 IFIFQFIVSLIQAIGTQGSG 87
F+ Q ++S+IQA+G G G
Sbjct: 111 TFMAQLVISIIQAVGIPGWG 130
>sp|Q5RCY9|SCAM4_PONAB Secretory carrier-associated membrane protein 4 OS=Pongo abelii
GN=SCAMP4 PE=2 SV=1
Length = 229
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 51/79 (64%)
Query: 10 VNILGSLLLMMHSGEIERVFLAVFFTFLLTPFSFVCWFRPAYKAFKDDSSFNFMVFFFIF 69
VN++ L + G LA + L TP S+VCWFRP YKAF+ DSSFNFM FFFIF
Sbjct: 53 VNLIACLAWWIGGGSGTNFGLAFVWLLLFTPCSYVCWFRPVYKAFRADSSFNFMAFFFIF 112
Query: 70 IFQFIVSLIQAIGTQGSGT 88
QF++++IQAIG G G
Sbjct: 113 GAQFVLTVIQAIGFSGWGA 131
>sp|Q969E2|SCAM4_HUMAN Secretory carrier-associated membrane protein 4 OS=Homo sapiens
GN=SCAMP4 PE=2 SV=1
Length = 229
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 50/79 (63%)
Query: 10 VNILGSLLLMMHSGEIERVFLAVFFTFLLTPFSFVCWFRPAYKAFKDDSSFNFMVFFFIF 69
VN++ L + G LA + L TP +VCWFRP YKAF+ DSSFNFM FFFIF
Sbjct: 53 VNLIACLAWWIGGGSGTNFGLAFVWLLLFTPCGYVCWFRPVYKAFRADSSFNFMAFFFIF 112
Query: 70 IFQFIVSLIQAIGTQGSGT 88
QF++++IQAIG G G
Sbjct: 113 GAQFVLTVIQAIGFSGWGA 131
>sp|O15126|SCAM1_HUMAN Secretory carrier-associated membrane protein 1 OS=Homo sapiens
GN=SCAMP1 PE=1 SV=2
Length = 338
Score = 57.4 bits (137), Expect = 3e-08, Method: Composition-based stats.
Identities = 38/85 (44%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Query: 4 HAGLMLVNILGSLL-LMMHSGEIERVFLAVFFTFLLTPFSFVCWFRPAYKAFKDDSSFNF 62
HA + +NI G L + S L++ + L TP SFVCW+RP Y AF+ DSSF F
Sbjct: 159 HAVTLFLNIFGCLAWFCVDSARAVDFGLSILWFLLFTPCSFVCWYRPLYGAFRSDSSFRF 218
Query: 63 MVFFFIFIFQFIVSLIQAIGTQGSG 87
VFFF++I QF V ++QA G G
Sbjct: 219 FVFFFVYICQFAVHVLQAAGFHNWG 243
>sp|P56603|SCAM1_RAT Secretory carrier-associated membrane protein 1 OS=Rattus
norvegicus GN=Scamp1 PE=1 SV=1
Length = 338
Score = 57.4 bits (137), Expect = 3e-08, Method: Composition-based stats.
Identities = 38/85 (44%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Query: 4 HAGLMLVNILGSLL-LMMHSGEIERVFLAVFFTFLLTPFSFVCWFRPAYKAFKDDSSFNF 62
HA + +NI G L + S L++ + L TP SFVCW+RP Y AF+ DSSF F
Sbjct: 159 HAVTLFLNIFGCLAWFCVDSSRAVDFGLSILWFLLFTPCSFVCWYRPLYGAFRSDSSFRF 218
Query: 63 MVFFFIFIFQFIVSLIQAIGTQGSG 87
VFFF++I QF V ++QA G G
Sbjct: 219 FVFFFVYICQFAVHVLQAAGFHNWG 243
>sp|Q58DR5|SCAM3_BOVIN Secretory carrier-associated membrane protein 3 OS=Bos taurus
GN=SCAMP3 PE=2 SV=1
Length = 347
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 42/58 (72%)
Query: 30 LAVFFTFLLTPFSFVCWFRPAYKAFKDDSSFNFMVFFFIFIFQFIVSLIQAIGTQGSG 87
L++ + L TP SFVCW+RP YKAF+ DSS NF VFFFIF Q ++ ++QAIG G G
Sbjct: 201 LSILWILLFTPCSFVCWYRPMYKAFRSDSSSNFFVFFFIFFVQDVLFVLQAIGIPGWG 258
>sp|Q8K021|SCAM1_MOUSE Secretory carrier-associated membrane protein 1 OS=Mus musculus
GN=Scamp1 PE=1 SV=1
Length = 338
Score = 57.4 bits (137), Expect = 3e-08, Method: Composition-based stats.
Identities = 38/85 (44%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Query: 4 HAGLMLVNILGSLL-LMMHSGEIERVFLAVFFTFLLTPFSFVCWFRPAYKAFKDDSSFNF 62
HA + +NI G L + S L++ + L TP SFVCW+RP Y AF+ DSSF F
Sbjct: 159 HAVTLFLNIFGCLAWFCVDSSRAVDFGLSILWFLLFTPCSFVCWYRPLYGAFRSDSSFRF 218
Query: 63 MVFFFIFIFQFIVSLIQAIGTQGSG 87
VFFF++I QF V ++QA G G
Sbjct: 219 FVFFFVYICQFAVHVLQAAGFHNWG 243
>sp|Q58DF6|SCAM4_BOVIN Secretory carrier-associated membrane protein 4 OS=Bos taurus
GN=SCAMP4 PE=2 SV=1
Length = 230
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 52/79 (65%)
Query: 10 VNILGSLLLMMHSGEIERVFLAVFFTFLLTPFSFVCWFRPAYKAFKDDSSFNFMVFFFIF 69
VN++ L + G LA+ + L +P +VCWFRPAYKAF+ DSSFNFM FFFIF
Sbjct: 53 VNLVACLAWWIAGGSGANFGLALLWLLLFSPCGYVCWFRPAYKAFRSDSSFNFMAFFFIF 112
Query: 70 IFQFIVSLIQAIGTQGSGT 88
QFI+++IQA+G G G
Sbjct: 113 GAQFILTIIQAVGFSGWGA 131
>sp|O77735|SCAM1_PIG Secretory carrier-associated membrane protein 1 OS=Sus scrofa
GN=SCAMP1 PE=2 SV=1
Length = 338
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 38/85 (44%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 4 HAGLMLVNILGSLLLMMHSGEIERVF-LAVFFTFLLTPFSFVCWFRPAYKAFKDDSSFNF 62
HA + +NI G L F L++ + L TP SFVCW+RP Y AF+ DSSF F
Sbjct: 159 HAVTLFLNIFGCLAWFCVDPSRGVDFGLSILWFLLFTPCSFVCWYRPLYGAFRSDSSFRF 218
Query: 63 MVFFFIFIFQFIVSLIQAIGTQGSG 87
VFFF++I QF V ++QA G G
Sbjct: 219 FVFFFVYICQFAVHVLQAAGFHNWG 243
>sp|O14828|SCAM3_HUMAN Secretory carrier-associated membrane protein 3 OS=Homo sapiens
GN=SCAMP3 PE=1 SV=3
Length = 347
Score = 53.9 bits (128), Expect = 3e-07, Method: Composition-based stats.
Identities = 34/58 (58%), Positives = 43/58 (74%)
Query: 30 LAVFFTFLLTPFSFVCWFRPAYKAFKDDSSFNFMVFFFIFIFQFIVSLIQAIGTQGSG 87
L++ + L TP SFVCW+RP YKAF+ DSSFNF VFFFIF Q ++ ++QAIG G G
Sbjct: 201 LSILWVLLFTPCSFVCWYRPMYKAFRSDSSFNFFVFFFIFFVQDVLFVLQAIGIPGWG 258
>sp|Q9C6X2|SCAM4_ARATH Secretory carrier-associated membrane protein 4 OS=Arabidopsis
thaliana GN=SCAMP4 PE=2 SV=1
Length = 264
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%)
Query: 11 NILGSLLLMMHSGEIERVFLAVFFTFLLTPFSFVCWFRPAYKAFKDDSSFNFMVFFFIFI 70
N++ +++ + G ++ FLA + + P S+V W+RP Y+A + DS+ F FFF ++
Sbjct: 134 NVIATMVCWIKGGGVKIFFLATIYALIGCPLSYVLWYRPLYRAMRTDSALKFGWFFFTYL 193
Query: 71 FQFIVSLIQAIGT 83
++ AI
Sbjct: 194 IHIGFCIVAAIAP 206
>sp|O35609|SCAM3_MOUSE Secretory carrier-associated membrane protein 3 OS=Mus musculus
GN=Scamp3 PE=1 SV=3
Length = 349
Score = 49.3 bits (116), Expect = 8e-06, Method: Composition-based stats.
Identities = 34/58 (58%), Positives = 42/58 (72%)
Query: 30 LAVFFTFLLTPFSFVCWFRPAYKAFKDDSSFNFMVFFFIFIFQFIVSLIQAIGTQGSG 87
L++ + L TP SFVCW+RP YKAF+ DSSFNF VFFFIF Q + ++QAIG G G
Sbjct: 203 LSMLWLLLFTPCSFVCWYRPMYKAFRSDSSFNFFVFFFIFFVQDVFFVLQAIGIPGWG 260
>sp|Q9SXA5|SCAM5_ARATH Secretory carrier-associated membrane protein 5 OS=Arabidopsis
thaliana GN=SCAMP5 PE=2 SV=2
Length = 291
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 30/54 (55%)
Query: 29 FLAVFFTFLLTPFSFVCWFRPAYKAFKDDSSFNFMVFFFIFIFQFIVSLIQAIG 82
LAV + P +V W+RP Y+AF+ DS+FNF FF ++ + L A+
Sbjct: 161 LLAVIYFISGVPGGYVLWYRPLYRAFRSDSAFNFGWFFLFYMLHILFCLFAAVA 214
>sp|Q9SKT3|SCAM1_ARATH Secretory carrier-associated membrane protein 1 OS=Arabidopsis
thaliana GN=SCAMP1 PE=1 SV=1
Length = 282
Score = 46.2 bits (108), Expect = 7e-05, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 30/54 (55%)
Query: 29 FLAVFFTFLLTPFSFVCWFRPAYKAFKDDSSFNFMVFFFIFIFQFIVSLIQAIG 82
FLA+ + P ++V W+RP Y+A + DS+ F FFF ++F + A+
Sbjct: 152 FLAIIYFISGVPGAYVMWYRPLYRAMRTDSALKFGWFFFTYLFHIAFCVFAAVA 205
>sp|Q0JAI9|SCAM6_ORYSJ Secretory carrier-associated membrane protein 6 OS=Oryza sativa
subsp. japonica GN=SCAMP6 PE=2 SV=1
Length = 273
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 39/73 (53%)
Query: 11 NILGSLLLMMHSGEIERVFLAVFFTFLLTPFSFVCWFRPAYKAFKDDSSFNFMVFFFIFI 70
N + ++ + G+ + FLA + L P S++ W+RP Y+A + +S+F+F FF ++
Sbjct: 143 NFIAVIVCWIKEGDSKLFFLATIYALLGIPLSYLIWYRPLYRAMRTNSAFSFGWFFLCYL 202
Query: 71 FQFIVSLIQAIGT 83
+I AI
Sbjct: 203 IHIGFCIIAAIAP 215
>sp|Q9ERN0|SCAM2_MOUSE Secretory carrier-associated membrane protein 2 OS=Mus musculus
GN=Scamp2 PE=2 SV=1
Length = 329
Score = 45.8 bits (107), Expect = 9e-05, Method: Composition-based stats.
Identities = 33/87 (37%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 3 IHAGLMLVNILGSLLLMMHSGEIERVF-LAVFFTFLLTPFSFVCWFRPAYKAFKDDSSFN 61
+H+ + +N+L L F L++ + + TP +F+CW+RP YKAF+ D+SF+
Sbjct: 158 LHSVTLFLNLLACLAWFTSDAANGTAFGLSILWFLIFTPCAFLCWYRPIYKAFRSDNSFS 217
Query: 62 FMVFFFIFIFQFIVSLIQAIGTQGSGT 88
F VFFF+F Q + IQ IG GT
Sbjct: 218 FFVFFFVFFCQIGIYFIQLIGLPNLGT 244
>sp|Q6Z8F5|SCAM5_ORYSJ Secretory carrier-associated membrane protein 5 OS=Oryza sativa
subsp. japonica GN=SCAMP5 PE=2 SV=1
Length = 281
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 38/73 (52%)
Query: 11 NILGSLLLMMHSGEIERVFLAVFFTFLLTPFSFVCWFRPAYKAFKDDSSFNFMVFFFIFI 70
N + ++ + G+ + FLA + L P S++ W+RP Y+A + DS+F+F FF ++
Sbjct: 151 NFIAVIVCWIRGGDSKLFFLATIYGMLGMPLSYLMWYRPLYRAMRTDSAFSFGWFFLCYM 210
Query: 71 FQFIVSLIQAIGT 83
+ AI
Sbjct: 211 LHIAFCVFAAIAP 223
>sp|Q8H5X5|SCAM1_ORYSJ Secretory carrier-associated membrane protein 1 OS=Oryza sativa
subsp. japonica GN=SCAMP1 PE=2 SV=1
Length = 306
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 30/54 (55%)
Query: 29 FLAVFFTFLLTPFSFVCWFRPAYKAFKDDSSFNFMVFFFIFIFQFIVSLIQAIG 82
LA+ + P ++V W+RP Y A + DS+ F +FF +++F + + A+
Sbjct: 176 LLAIIYFISGVPGAYVLWYRPLYNAMRTDSALKFGLFFLVYLFHILFCVFSAVA 229
>sp|A2YMP7|SCAM1_ORYSI Putative secretory carrier-associated membrane protein 1 OS=Oryza
sativa subsp. indica GN=SCAMP1 PE=3 SV=1
Length = 306
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 30/54 (55%)
Query: 29 FLAVFFTFLLTPFSFVCWFRPAYKAFKDDSSFNFMVFFFIFIFQFIVSLIQAIG 82
LA+ + P ++V W+RP Y A + DS+ F +FF +++F + + A+
Sbjct: 176 LLAIIYFISGVPGAYVLWYRPLYNAMRTDSALKFGLFFLVYLFHILFCVFSAVA 229
>sp|O15127|SCAM2_HUMAN Secretory carrier-associated membrane protein 2 OS=Homo sapiens
GN=SCAMP2 PE=1 SV=2
Length = 329
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 41/58 (70%)
Query: 30 LAVFFTFLLTPFSFVCWFRPAYKAFKDDSSFNFMVFFFIFIFQFIVSLIQAIGTQGSG 87
L++ + + TP +F+CW+RP YKAF+ D+SF+F VFFF+F Q + +IQ +G G G
Sbjct: 186 LSILWFLIFTPCAFLCWYRPIYKAFRSDNSFSFFVFFFVFFCQIGIYIIQLVGIPGLG 243
>sp|Q9ZTX0|SCAM_PEA Secretory carrier-associated membrane protein OS=Pisum sativum
GN=PSAM2 PE=2 SV=1
Length = 289
Score = 43.1 bits (100), Expect = 5e-04, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 29/54 (53%)
Query: 29 FLAVFFTFLLTPFSFVCWFRPAYKAFKDDSSFNFMVFFFIFIFQFIVSLIQAIG 82
FLA+ + P ++ W+RP Y+AF+ DS+ F FF ++ ++ A+
Sbjct: 158 FLAIIYFIAGVPGAYALWYRPLYRAFRTDSAIKFGWFFMFYLLHIGFCILAAVA 211
>sp|Q9M5P2|SCAM3_ARATH Secretory carrier-associated membrane protein 3 OS=Arabidopsis
thaliana GN=SCAMP3 PE=1 SV=1
Length = 289
Score = 40.4 bits (93), Expect = 0.003, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 28/54 (51%)
Query: 29 FLAVFFTFLLTPFSFVCWFRPAYKAFKDDSSFNFMVFFFIFIFQFIVSLIQAIG 82
LA+ + P +V W+RP Y+AF+ DS+ +F FF ++ + A+
Sbjct: 159 LLALIYFIAGVPGGYVLWYRPLYRAFRTDSALSFGWFFLFYMLHIAFCVFAAVA 212
>sp|Q75IC7|SCAM4_ORYSJ Secretory carrier-associated membrane protein 4 OS=Oryza sativa
subsp. japonica GN=SCAMP4 PE=2 SV=1
Length = 313
Score = 39.7 bits (91), Expect = 0.006, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 29/53 (54%)
Query: 29 FLAVFFTFLLTPFSFVCWFRPAYKAFKDDSSFNFMVFFFIFIFQFIVSLIQAI 81
FLAV + L P ++ W+RP Y+A +++S+ F FF ++ + A+
Sbjct: 183 FLAVIYFILGCPGAYYLWYRPLYRAMRNESALKFGWFFLFYLVHIAFCVYAAV 235
>sp|Q60EA5|SCAM3_ORYSJ Secretory carrier-associated membrane protein 3 OS=Oryza sativa
subsp. japonica GN=SCAMP3 PE=2 SV=1
Length = 282
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 27/54 (50%)
Query: 30 LAVFFTFLLTPFSFVCWFRPAYKAFKDDSSFNFMVFFFIFIFQFIVSLIQAIGT 83
LA+ + P ++V W+RP Y A + +S+ F FF ++ I + A+
Sbjct: 153 LAIIYFISGVPGAYVLWYRPLYNAMRTESALKFGWFFLFYLIHIIFCVWAAVAP 206
>sp|Q7F613|SCAM2_ORYSJ Secretory carrier-associated membrane protein 2 OS=Oryza sativa
subsp. japonica GN=SCAMP2 PE=2 SV=1
Length = 286
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/79 (21%), Positives = 35/79 (44%)
Query: 5 AGLMLVNILGSLLLMMHSGEIERVFLAVFFTFLLTPFSFVCWFRPAYKAFKDDSSFNFMV 64
A + NI+ + + + LA+ + P ++V W+RP Y A + +S+ F
Sbjct: 132 AACLFWNIIATTAAWIKGAGVMIWLLAIIYFISGVPGAYVLWYRPLYNAMRTESALKFGW 191
Query: 65 FFFIFIFQFIVSLIQAIGT 83
FF ++ + + A+
Sbjct: 192 FFLFYLIHILFCIWSAVAP 210
>sp|Q9LR68|SCAM2_ARATH Secretory carrier-associated membrane protein 2 OS=Arabidopsis
thaliana GN=SCAMP2 PE=2 SV=1
Length = 283
Score = 31.6 bits (70), Expect = 1.5, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 6 GLMLVNILGSLLLMMHSGEIERVFLAVFFTFLL-TPFSFVCWFRPAYKAFKDDSSF 60
G +L NI+ + + GE ++L FL P ++V W+RP Y+A + DS+
Sbjct: 130 GCLLWNIVAVTVAWI-KGEGPTIWLLSIIYFLAGVPGAYVLWYRPLYRATRTDSAL 184
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.341 0.150 0.469
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,838,817
Number of Sequences: 539616
Number of extensions: 918715
Number of successful extensions: 3162
Number of sequences better than 100.0: 43
Number of HSP's better than 100.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 3120
Number of HSP's gapped (non-prelim): 44
length of query: 88
length of database: 191,569,459
effective HSP length: 58
effective length of query: 30
effective length of database: 160,271,731
effective search space: 4808151930
effective search space used: 4808151930
T: 11
A: 40
X1: 15 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.9 bits)
S2: 55 (25.8 bits)