Your job contains 1 sequence.
>psy454
MKEINRYFYSACFYSSCFGYRFCTRVNISREDAQYLSLFIHLVQGENDDILDWPFVGRIR
FTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMED
DTFVIKTQVTEMTH
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy454
(134 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|A7XUJ6 - symbol:TRAF6 "TNF receptor-associated ... 174 2.5e-12 1
UNIPROTKB|Q3ZCC3 - symbol:TRAF6 "TNF receptor-associated ... 172 4.0e-12 1
MGI|MGI:108072 - symbol:Traf6 "TNF receptor-associated fa... 171 5.0e-12 1
RGD|1306853 - symbol:Traf6 "TNF receptor-associated facto... 171 5.0e-12 1
UNIPROTKB|B6CJY4 - symbol:TRAF6 "TNF receptor-associated ... 170 6.2e-12 1
UNIPROTKB|B6CJY5 - symbol:TRAF6 "TNF receptor-associated ... 170 6.2e-12 1
UNIPROTKB|Q9Y4K3 - symbol:TRAF6 "TNF receptor-associated ... 169 8.0e-12 1
UNIPROTKB|Q28DL4 - symbol:traf6 "TNF receptor-associated ... 169 9.0e-12 1
UNIPROTKB|E1C626 - symbol:TRAF6 "Uncharacterized protein"... 168 1.1e-11 1
UNIPROTKB|F5H1P7 - symbol:TRAF5 "TNF receptor-associated ... 165 1.6e-11 1
UNIPROTKB|O00463 - symbol:TRAF5 "TNF receptor-associated ... 165 2.4e-11 1
ZFIN|ZDB-GENE-030131-5735 - symbol:traf6 "TNF receptor-as... 162 4.9e-11 1
UNIPROTKB|Q6DJN2 - symbol:traf6-b "TNF receptor-associate... 161 6.5e-11 1
UNIPROTKB|F1NLM1 - symbol:F1NLM1 "Uncharacterized protein... 159 9.0e-11 1
UNIPROTKB|Q3MV19 - symbol:traf6-a "TNF receptor-associate... 158 1.4e-10 1
UNIPROTKB|E1BMI8 - symbol:TRAF1 "Uncharacterized protein"... 154 2.2e-10 1
ZFIN|ZDB-GENE-030131-5345 - symbol:traf2b "Tnf receptor-a... 154 3.4e-10 1
UNIPROTKB|K7GLK8 - symbol:LOC100156979 "Uncharacterized p... 153 4.1e-10 1
RGD|1304633 - symbol:Traf3 "Tnf receptor-associated facto... 153 4.5e-10 1
UNIPROTKB|A6NHG8 - symbol:TRAF3 "TNF receptor-associated ... 153 4.5e-10 1
UNIPROTKB|K7GKN5 - symbol:LOC100156979 "Uncharacterized p... 153 4.5e-10 1
UNIPROTKB|Q13077 - symbol:TRAF1 "TNF receptor-associated ... 151 4.7e-10 1
MGI|MGI:108041 - symbol:Traf3 "TNF receptor-associated fa... 153 4.9e-10 1
UNIPROTKB|E1BBH2 - symbol:TRAF3 "Uncharacterized protein"... 153 4.9e-10 1
UNIPROTKB|E2RG86 - symbol:TRAF3 "Uncharacterized protein"... 153 4.9e-10 1
UNIPROTKB|Q13114 - symbol:TRAF3 "TNF receptor-associated ... 153 4.9e-10 1
UNIPROTKB|F1SA11 - symbol:LOC100156979 "Uncharacterized p... 153 4.9e-10 1
MGI|MGI:101836 - symbol:Traf1 "TNF receptor-associated fa... 150 5.8e-10 1
UNIPROTKB|I3L7X2 - symbol:TRAF5 "Uncharacterized protein"... 152 6.1e-10 1
ZFIN|ZDB-GENE-071120-4 - symbol:traf1 "TNF receptor-assoc... 151 7.6e-10 1
UNIPROTKB|A7YWC7 - symbol:TRAF5 "Uncharacterized protein"... 151 7.8e-10 1
MGI|MGI:107548 - symbol:Traf5 "TNF receptor-associated fa... 151 7.8e-10 1
UNIPROTKB|B1AMX9 - symbol:TRAF2 "TNF receptor-associated ... 149 7.9e-10 1
UNIPROTKB|E2QWC6 - symbol:TRAF1 "Uncharacterized protein"... 148 9.8e-10 1
UNIPROTKB|Q12933 - symbol:TRAF2 "TNF receptor-associated ... 149 1.1e-09 1
UNIPROTKB|F1NMN9 - symbol:TRAF3 "Uncharacterized protein"... 149 1.2e-09 1
UNIPROTKB|K7GRG1 - symbol:TRAF2 "Uncharacterized protein"... 146 1.5e-09 1
UNIPROTKB|E1BTY1 - symbol:TRAF2 "Uncharacterized protein"... 147 1.9e-09 1
MGI|MGI:101835 - symbol:Traf2 "TNF receptor-associated fa... 146 2.3e-09 1
UNIPROTKB|F1RVZ4 - symbol:TRAF2 "Uncharacterized protein"... 146 2.5e-09 1
UNIPROTKB|E2RR95 - symbol:TRAF5 "Uncharacterized protein"... 145 3.4e-09 1
UNIPROTKB|J9P706 - symbol:TRAF5 "Uncharacterized protein"... 145 3.5e-09 1
UNIPROTKB|F6XG92 - symbol:TRAF2 "Uncharacterized protein"... 144 3.7e-09 1
UNIPROTKB|F1PY23 - symbol:TRAF2 "Uncharacterized protein"... 144 3.7e-09 1
UNIPROTKB|E2R6C7 - symbol:TRAF2 "Uncharacterized protein"... 144 3.7e-09 1
UNIPROTKB|J9NS71 - symbol:TRAF2 "Uncharacterized protein"... 144 4.0e-09 1
UNIPROTKB|Q805B1 - symbol:TRAF-5 "Uncharacterized protein... 144 4.4e-09 1
ZFIN|ZDB-GENE-040801-257 - symbol:traf3 "TNF receptor-ass... 143 5.9e-09 1
UNIPROTKB|F1SME2 - symbol:F1SME2 "Uncharacterized protein... 140 6.9e-09 1
UNIPROTKB|I3LS75 - symbol:I3LS75 "Uncharacterized protein... 139 9.2e-09 1
UNIPROTKB|E1B9D9 - symbol:TRAF2 "Uncharacterized protein"... 138 1.8e-08 1
UNIPROTKB|E2RDE8 - symbol:TRAF6 "Uncharacterized protein"... 132 8.7e-08 1
UNIPROTKB|I3LBF4 - symbol:LOC100737614 "Uncharacterized p... 129 1.1e-07 1
UNIPROTKB|F1RNA8 - symbol:TRAF4 "Uncharacterized protein"... 129 1.2e-07 1
UNIPROTKB|F6RJL7 - symbol:TRAF4 "Uncharacterized protein"... 129 1.4e-07 1
UNIPROTKB|Q9BUZ4 - symbol:TRAF4 "TNF receptor-associated ... 129 1.4e-07 1
ZFIN|ZDB-GENE-040308-1 - symbol:traf4a "tnf receptor-asso... 129 1.4e-07 1
MGI|MGI:1202880 - symbol:Traf4 "TNF receptor associated f... 127 2.3e-07 1
RGD|1306708 - symbol:Traf4 "Tnf receptor associated facto... 127 2.3e-07 1
UNIPROTKB|E2QYH9 - symbol:TRAF4 "Uncharacterized protein"... 124 4.6e-07 1
UNIPROTKB|E1B7B4 - symbol:MEP1B "Uncharacterized protein"... 98 1.1e-06 2
ZFIN|ZDB-GENE-071120-3 - symbol:traf5 "Tnf receptor-assoc... 119 1.9e-06 1
FB|FBgn0026319 - symbol:Traf4 "TNF-receptor-associated fa... 118 2.8e-06 1
ZFIN|ZDB-GENE-040305-2 - symbol:traf4b "tnf receptor-asso... 113 7.6e-06 1
UNIPROTKB|I3LC29 - symbol:TRAF1 "Uncharacterized protein"... 105 3.2e-05 1
RGD|3081 - symbol:Mep1b "meprin 1 beta" species:10116 "Ra... 93 0.00051 2
>UNIPROTKB|A7XUJ6 [details] [associations]
symbol:TRAF6 "TNF receptor-associated factor 6"
species:9823 "Sus scrofa" [GO:0005811 "lipid particle"
evidence=ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0070498 "interleukin-1-mediated
signaling pathway" evidence=IEA] [GO:0051865 "protein
autoubiquitination" evidence=IEA] [GO:0050852 "T cell receptor
signaling pathway" evidence=IEA] [GO:0048468 "cell development"
evidence=IEA] [GO:0046849 "bone remodeling" evidence=IEA]
[GO:0045672 "positive regulation of osteoclast differentiation"
evidence=IEA] [GO:0043507 "positive regulation of JUN kinase
activity" evidence=IEA] [GO:0043123 "positive regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IEA] [GO:0042981
"regulation of apoptotic process" evidence=IEA] [GO:0031666
"positive regulation of lipopolysaccharide-mediated signaling
pathway" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0007250 "activation of NF-kappaB-inducing kinase activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0001503 "ossification" evidence=IEA]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR012227 InterPro:IPR027139
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144
PROSITE:PS50145 SMART:SM00061 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0005938 GO:GO:0005634 GO:GO:0007165
GO:GO:0042981 GO:GO:0005811 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 SUPFAM:SSF49599
GeneTree:ENSGT00550000074359 CTD:7189 eggNOG:NOG289765
HOGENOM:HOG000006625 HOVERGEN:HBG060248 KO:K03175 OMA:SEAPIRQ
OrthoDB:EOG4320XV PANTHER:PTHR10131:SF48 EMBL:EU095967
RefSeq:NP_001098756.1 UniGene:Ssc.96412 ProteinModelPortal:A7XUJ6
SMR:A7XUJ6 STRING:A7XUJ6 Ensembl:ENSSSCT00000014516
Ensembl:ENSSSCT00000033074 GeneID:396629 KEGG:ssc:396629
Uniprot:A7XUJ6
Length = 541
Score = 174 (66.3 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 49/130 (37%), Positives = 72/130 (55%)
Query: 9 YSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTAL 64
+S FY+ GY+ C R+++ AQ Y+SLF+H +QGE D L WPF G IR T L
Sbjct: 395 HSPGFYTGKPGYKLCMRLHLQLPTAQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLTIL 454
Query: 65 NTSSEFSIT---DEIQSDK-NFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMED 120
+ SE I +EI K +F+RP N K FG+ F+ + D L R F+ +D
Sbjct: 455 D-QSEAPIRQNHEEIMDAKPELLAFQRPT-IPRNPKGFGYVTFMHL-DALRQ-RTFI-KD 509
Query: 121 DTFVIKTQVT 130
DT +++ +V+
Sbjct: 510 DTLLVRCEVS 519
>UNIPROTKB|Q3ZCC3 [details] [associations]
symbol:TRAF6 "TNF receptor-associated factor 6"
species:9913 "Bos taurus" [GO:0005811 "lipid particle"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005938 "cell cortex" evidence=IEA] [GO:2000679
"positive regulation of transcription regulatory region DNA
binding" evidence=IEA] [GO:0070498 "interleukin-1-mediated
signaling pathway" evidence=IEA] [GO:0051092 "positive regulation
of NF-kappaB transcription factor activity" evidence=IEA]
[GO:0051023 "regulation of immunoglobulin secretion" evidence=IEA]
[GO:0050852 "T cell receptor signaling pathway" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0048468 "cell development" evidence=IEA] [GO:0047485 "protein
N-terminus binding" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045672 "positive regulation of osteoclast differentiation"
evidence=IEA] [GO:0045453 "bone resorption" evidence=IEA]
[GO:0045410 "positive regulation of interleukin-6 biosynthetic
process" evidence=IEA] [GO:0045084 "positive regulation of
interleukin-12 biosynthetic process" evidence=IEA] [GO:0043507
"positive regulation of JUN kinase activity" evidence=IEA]
[GO:0043422 "protein kinase B binding" evidence=IEA] [GO:0043123
"positive regulation of I-kappaB kinase/NF-kappaB cascade"
evidence=IEA] [GO:0043011 "myeloid dendritic cell differentiation"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0042475 "odontogenesis of dentin-containing
tooth" evidence=IEA] [GO:0042102 "positive regulation of T cell
proliferation" evidence=IEA] [GO:0042088 "T-helper 1 type immune
response" evidence=IEA] [GO:0035631 "CD40 receptor complex"
evidence=IEA] [GO:0032743 "positive regulation of interleukin-2
production" evidence=IEA] [GO:0031996 "thioesterase binding"
evidence=IEA] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031666 "positive regulation of lipopolysaccharide-mediated
signaling pathway" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] [GO:0031435 "mitogen-activated
protein kinase kinase kinase binding" evidence=IEA] [GO:0030316
"osteoclast differentiation" evidence=IEA] [GO:0019886 "antigen
processing and presentation of exogenous peptide antigen via MHC
class II" evidence=IEA] [GO:0009898 "internal side of plasma
membrane" evidence=IEA] [GO:0007250 "activation of
NF-kappaB-inducing kinase activity" evidence=IEA] [GO:0007249
"I-kappaB kinase/NF-kappaB cascade" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0002726 "positive regulation of T cell
cytokine production" evidence=IEA] [GO:0001843 "neural tube
closure" evidence=IEA] [GO:0001503 "ossification" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051865 "protein
autoubiquitination" evidence=IEA] [GO:0042981 "regulation of
apoptotic process" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR012227
InterPro:IPR027139 Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005829 GO:GO:0005938
GO:GO:0048471 GO:GO:0042981 GO:GO:0019886 GO:GO:0050852
GO:GO:0042088 GO:GO:0005811 GO:GO:0046872 GO:GO:0043123
GO:GO:0008270 GO:GO:0031965 GO:GO:0045944 GO:GO:0000122
GO:GO:0051092 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0042102
GO:GO:0001843 GO:GO:0042475 GO:GO:0045453 GO:GO:0004842
GO:GO:0001503 GO:GO:0007250 GO:GO:0009898 InterPro:IPR017907
GO:GO:0070534 GO:GO:0048468 GO:GO:0007249 SUPFAM:SSF49599
GO:GO:0043011 GO:GO:0035631 GO:GO:0045672 GO:GO:0030316
GO:GO:0032743 GO:GO:0051023 GO:GO:0043507 GO:GO:0070498
GO:GO:0045410 GO:GO:2000679 GO:GO:0045084 GO:GO:0031666
GO:GO:0002726 GeneTree:ENSGT00550000074359 EMBL:DQ319074
EMBL:DQ407276 EMBL:BC102522 IPI:IPI00710621 RefSeq:NP_001029833.1
UniGene:Bt.89201 ProteinModelPortal:Q3ZCC3 SMR:Q3ZCC3 STRING:Q3ZCC3
PRIDE:Q3ZCC3 Ensembl:ENSBTAT00000021630 GeneID:539124
KEGG:bta:539124 CTD:7189 eggNOG:NOG289765 HOGENOM:HOG000006625
HOVERGEN:HBG060248 InParanoid:Q3ZCC3 KO:K03175 OMA:SEAPIRQ
OrthoDB:EOG4320XV NextBio:20877796 PANTHER:PTHR10131:SF48
Uniprot:Q3ZCC3
Length = 542
Score = 172 (65.6 bits), Expect = 4.0e-12, P = 4.0e-12
Identities = 46/130 (35%), Positives = 72/130 (55%)
Query: 9 YSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTAL 64
+S FY+ GY+ C R+++ AQ Y+SLF+H +QGE D L WPF G IR T L
Sbjct: 396 HSPGFYTGKPGYKLCMRLHLQLPSAQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLTIL 455
Query: 65 NTSSEFSIT---DEIQSDK-NFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMED 120
+ SE ++ +EI K +F+RP N K FG+ F+ + + R F+ +D
Sbjct: 456 D-QSEAAVRQNHEEIMDAKPELLAFQRPT-IPRNPKGFGYVTFMHLEALRQ--RTFI-KD 510
Query: 121 DTFVIKTQVT 130
DT +++ +V+
Sbjct: 511 DTLLVRCEVS 520
>MGI|MGI:108072 [details] [associations]
symbol:Traf6 "TNF receptor-associated factor 6" species:10090
"Mus musculus" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0001503 "ossification"
evidence=IMP] [GO:0001843 "neural tube closure" evidence=IMP]
[GO:0002726 "positive regulation of T cell cytokine production"
evidence=ISO] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;IDA] [GO:0004871 "signal transducer activity"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005811 "lipid particle" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0006461 "protein complex assembly" evidence=ISO]
[GO:0006955 "immune response" evidence=IMP] [GO:0007165 "signal
transduction" evidence=IDA;TAS] [GO:0007249 "I-kappaB
kinase/NF-kappaB cascade" evidence=IMP] [GO:0007250 "activation of
NF-kappaB-inducing kinase activity" evidence=ISO] [GO:0007254 "JNK
cascade" evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0009887 "organ morphogenesis" evidence=IMP] [GO:0009898
"internal side of plasma membrane" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IGI] [GO:0016874 "ligase
activity" evidence=IEA] [GO:0019221 "cytokine-mediated signaling
pathway" evidence=ISO] [GO:0019886 "antigen processing and
presentation of exogenous peptide antigen via MHC class II"
evidence=IMP] [GO:0019901 "protein kinase binding" evidence=ISO]
[GO:0030316 "osteoclast differentiation" evidence=IMP] [GO:0031435
"mitogen-activated protein kinase kinase kinase binding"
evidence=ISO] [GO:0031625 "ubiquitin protein ligase binding"
evidence=ISO] [GO:0031666 "positive regulation of
lipopolysaccharide-mediated signaling pathway" evidence=IMP]
[GO:0031996 "thioesterase binding" evidence=ISO] [GO:0032147
"activation of protein kinase activity" evidence=ISO] [GO:0032743
"positive regulation of interleukin-2 production" evidence=ISO]
[GO:0035631 "CD40 receptor complex" evidence=IDA] [GO:0042088
"T-helper 1 type immune response" evidence=IMP] [GO:0042102
"positive regulation of T cell proliferation" evidence=IMP]
[GO:0042475 "odontogenesis of dentin-containing tooth"
evidence=IMP] [GO:0042826 "histone deacetylase binding"
evidence=ISO] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0043011 "myeloid dendritic cell differentiation"
evidence=IMP] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISO;IMP] [GO:0043234 "protein
complex" evidence=ISO] [GO:0043422 "protein kinase B binding"
evidence=ISO] [GO:0043507 "positive regulation of JUN kinase
activity" evidence=ISO] [GO:0045084 "positive regulation of
interleukin-12 biosynthetic process" evidence=IMP] [GO:0045410
"positive regulation of interleukin-6 biosynthetic process"
evidence=IMP] [GO:0045453 "bone resorption" evidence=IMP]
[GO:0045672 "positive regulation of osteoclast differentiation"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0046849 "bone remodeling" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=ISO] [GO:0048468 "cell development" evidence=IMP]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0048661 "positive regulation of smooth muscle cell
proliferation" evidence=ISO] [GO:0050852 "T cell receptor signaling
pathway" evidence=ISO] [GO:0051023 "regulation of immunoglobulin
secretion" evidence=IDA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0051092 "positive regulation of NF-kappaB
transcription factor activity" evidence=ISO] [GO:0051865 "protein
autoubiquitination" evidence=ISO;TAS] [GO:0070498
"interleukin-1-mediated signaling pathway" evidence=ISO;IMP]
[GO:0070534 "protein K63-linked ubiquitination" evidence=ISO;IDA]
[GO:0070555 "response to interleukin-1" evidence=ISO] [GO:2000679
"positive regulation of transcription regulatory region DNA
binding" evidence=ISO] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR012227
InterPro:IPR027139 Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
UniPathway:UPA00143 MGI:MGI:108072 Prosite:PS00518 GO:GO:0005829
GO:GO:0005938 GO:GO:0048471 GO:GO:0042981 GO:GO:0019886
GO:GO:0050852 GO:GO:0042088 GO:GO:0007254 GO:GO:0005811
GO:GO:0046872 GO:GO:0043123 GO:GO:0008270 GO:GO:0031965
GO:GO:0048661 GO:GO:0045944 Reactome:REACT_115202 EMBL:CH466519
GO:GO:0000122 GO:GO:0004871 Reactome:REACT_107772 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0042102 GO:GO:0001843
GO:GO:0042475 GO:GO:0045453 GO:GO:0004842 GO:GO:0001503
GO:GO:0007250 GO:GO:0009898 InterPro:IPR017907 GO:GO:0070534
GO:GO:0048468 GO:GO:0051865 GO:GO:0007249 SUPFAM:SSF49599
GO:GO:0043011 GO:GO:0035631 GO:GO:0045672 GO:GO:0030316
GO:GO:0032743 GO:GO:0051023 GO:GO:0043507 GO:GO:0070498
GO:GO:0045410 GO:GO:2000679 GO:GO:0045084 GO:GO:0031666
GO:GO:0002726 EMBL:AL929571 GeneTree:ENSGT00550000074359 CTD:7189
eggNOG:NOG289765 HOGENOM:HOG000006625 HOVERGEN:HBG060248 KO:K03175
OMA:SEAPIRQ OrthoDB:EOG4320XV PANTHER:PTHR10131:SF48 EMBL:D84655
EMBL:AK041172 EMBL:AK155434 EMBL:BC060705 IPI:IPI00136488
IPI:IPI00222919 RefSeq:NP_033450.2 UniGene:Mm.292729 HSSP:Q9Y4K3
ProteinModelPortal:P70196 SMR:P70196 DIP:DIP-29812N IntAct:P70196
MINT:MINT-252449 STRING:P70196 PhosphoSite:P70196 PRIDE:P70196
Ensembl:ENSMUST00000004949 GeneID:22034 KEGG:mmu:22034
UCSC:uc008lhl.1 UCSC:uc008lhm.1 InParanoid:Q6P9M0 NextBio:301798
Bgee:P70196 CleanEx:MM_TRAF6 Genevestigator:P70196
GermOnline:ENSMUSG00000027164 Uniprot:P70196
Length = 530
Score = 171 (65.3 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 44/129 (34%), Positives = 70/129 (54%)
Query: 9 YSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTAL 64
+S FY+ GY+ C R+++ AQ Y+SLF+H +QGE D L WPF G IR T L
Sbjct: 384 HSPGFYTGRPGYKLCMRLHLQLPTAQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLTIL 443
Query: 65 NTSSEF--SITDEIQSDK-NFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDD 121
+ S +E+ K +F+RP N K FG+ F+ + + L +G ++DD
Sbjct: 444 DQSEALIRQNHEEVMDAKPELLAFQRPT-IPRNPKGFGYVTFMHL-EALR--QGTFIKDD 499
Query: 122 TFVIKTQVT 130
T +++ +V+
Sbjct: 500 TLLVRCEVS 508
>RGD|1306853 [details] [associations]
symbol:Traf6 "TNF receptor-associated factor 6, E3 ubiquitin
protein ligase" species:10116 "Rattus norvegicus" [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA;ISO] [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0001503 "ossification"
evidence=IEA;ISO] [GO:0001843 "neural tube closure"
evidence=IEA;ISO] [GO:0002726 "positive regulation of T cell
cytokine production" evidence=IEA;ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;ISS] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005811
"lipid particle" evidence=ISO;ISS] [GO:0005829 "cytosol"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=ISO]
[GO:0005938 "cell cortex" evidence=IEA] [GO:0006461 "protein
complex assembly" evidence=IMP] [GO:0006955 "immune response"
evidence=ISO] [GO:0007165 "signal transduction" evidence=ISO]
[GO:0007249 "I-kappaB kinase/NF-kappaB cascade" evidence=IEA;ISO]
[GO:0007250 "activation of NF-kappaB-inducing kinase activity"
evidence=IEA;ISO] [GO:0007254 "JNK cascade" evidence=IMP]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009887 "organ
morphogenesis" evidence=ISO] [GO:0009898 "internal side of plasma
membrane" evidence=IEA;ISO] [GO:0016567 "protein ubiquitination"
evidence=ISO] [GO:0019221 "cytokine-mediated signaling pathway"
evidence=IMP] [GO:0019886 "antigen processing and presentation of
exogenous peptide antigen via MHC class II" evidence=IEA;ISO]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0030316
"osteoclast differentiation" evidence=IEA;ISO] [GO:0031435
"mitogen-activated protein kinase kinase kinase binding"
evidence=IEA;ISO] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA;ISO] [GO:0031666 "positive regulation of
lipopolysaccharide-mediated signaling pathway" evidence=IEA;ISO]
[GO:0031965 "nuclear membrane" evidence=IEA;ISO] [GO:0031996
"thioesterase binding" evidence=IEA;ISO] [GO:0032147 "activation of
protein kinase activity" evidence=ISO] [GO:0032743 "positive
regulation of interleukin-2 production" evidence=IEA;ISO]
[GO:0035631 "CD40 receptor complex" evidence=IEA;ISO] [GO:0042088
"T-helper 1 type immune response" evidence=IEA;ISO] [GO:0042102
"positive regulation of T cell proliferation" evidence=IEA;ISO]
[GO:0042475 "odontogenesis of dentin-containing tooth"
evidence=IEA;ISO] [GO:0042826 "histone deacetylase binding"
evidence=IEA;ISO] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0043011 "myeloid dendritic cell differentiation"
evidence=IEA;ISO] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA;ISO] [GO:0043234 "protein
complex" evidence=IMP] [GO:0043422 "protein kinase B binding"
evidence=IEA;ISO] [GO:0043507 "positive regulation of JUN kinase
activity" evidence=IEA;ISO] [GO:0045084 "positive regulation of
interleukin-12 biosynthetic process" evidence=IEA;ISO] [GO:0045410
"positive regulation of interleukin-6 biosynthetic process"
evidence=IEA;ISO] [GO:0045453 "bone resorption" evidence=IEA;ISO]
[GO:0045672 "positive regulation of osteoclast differentiation"
evidence=IEA;ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IMP] [GO:0046849 "bone remodeling" evidence=ISO]
[GO:0047485 "protein N-terminus binding" evidence=IEA;ISO]
[GO:0048468 "cell development" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048661
"positive regulation of smooth muscle cell proliferation"
evidence=IMP] [GO:0050852 "T cell receptor signaling pathway"
evidence=IEA;ISO] [GO:0051023 "regulation of immunoglobulin
secretion" evidence=IEA;ISO] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0051092 "positive regulation of NF-kappaB
transcription factor activity" evidence=IEA;ISO] [GO:0051865
"protein autoubiquitination" evidence=IEA;ISO] [GO:0070498
"interleukin-1-mediated signaling pathway" evidence=ISO;IMP]
[GO:0070534 "protein K63-linked ubiquitination" evidence=ISO;ISS]
[GO:0070555 "response to interleukin-1" evidence=ISO] [GO:2000679
"positive regulation of transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR012227 InterPro:IPR027139
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144
PROSITE:PS50145 SMART:SM00061 SMART:SM00184 UniPathway:UPA00143
RGD:1306853 Prosite:PS00518 GO:GO:0005829 GO:GO:0005938
GO:GO:0048471 GO:GO:0043234 GO:GO:0006461 GO:GO:0042981
GO:GO:0019886 GO:GO:0050852 GO:GO:0042088 GO:GO:0007254
GO:GO:0005811 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
GO:GO:0031965 GO:GO:0048661 GO:GO:0045944 GO:GO:0000122
GO:GO:0051092 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0042102
GO:GO:0001843 GO:GO:0042475 GO:GO:0045453 GO:GO:0004842
GO:GO:0001503 GO:GO:0007250 GO:GO:0009898 InterPro:IPR017907
GO:GO:0070534 GO:GO:0048468 GO:GO:0007249 SUPFAM:SSF49599
GO:GO:0043011 GO:GO:0035631 EMBL:CH473949 GO:GO:0045672
GO:GO:0030316 GO:GO:0032743 GO:GO:0051023 GO:GO:0043507
GO:GO:0070498 GO:GO:0045410 GO:GO:2000679 GO:GO:0045084
GO:GO:0031666 GO:GO:0002726 GeneTree:ENSGT00550000074359 CTD:7189
eggNOG:NOG289765 HOGENOM:HOG000006625 HOVERGEN:HBG060248 KO:K03175
OMA:SEAPIRQ OrthoDB:EOG4320XV PANTHER:PTHR10131:SF48 EMBL:BC168921
IPI:IPI00363697 RefSeq:NP_001101224.1 UniGene:Rn.220435
ProteinModelPortal:B5DF45 STRING:B5DF45 PhosphoSite:B5DF45
Ensembl:ENSRNOT00000006148 GeneID:311245 KEGG:rno:311245
UCSC:RGD:1306853 NextBio:663249 Genevestigator:B5DF45
Uniprot:B5DF45
Length = 530
Score = 171 (65.3 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 46/130 (35%), Positives = 72/130 (55%)
Query: 9 YSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTAL 64
+S FY+ GY+ C R+++ AQ Y+SLF+H +QGE D L WPF G IR T L
Sbjct: 384 HSPGFYTGRPGYKLCMRLHLQLPTAQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLTIL 443
Query: 65 NTSSEFSIT---DEIQSDK-NFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMED 120
+ SE I +E+ K +F+RP N K FG+ F+ + + L +G ++D
Sbjct: 444 D-QSEAVIRQNHEEVMDAKPELLAFQRPT-IPRNPKGFGYVTFMHL-EALR--QGTFIKD 498
Query: 121 DTFVIKTQVT 130
DT +++ +V+
Sbjct: 499 DTLLVRCEVS 508
>UNIPROTKB|B6CJY4 [details] [associations]
symbol:TRAF6 "TNF receptor-associated factor 6"
species:9531 "Cercocebus atys" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISS] [GO:0005811 "lipid particle"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR012227
InterPro:IPR027139 Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005938 GO:GO:0005634
GO:GO:0007165 GO:GO:0042981 GO:GO:0005811 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 SUPFAM:SSF49599 HOVERGEN:HBG060248
PANTHER:PTHR10131:SF48 EMBL:EU204928 ProteinModelPortal:B6CJY4
Uniprot:B6CJY4
Length = 522
Score = 170 (64.9 bits), Expect = 6.2e-12, P = 6.2e-12
Identities = 46/130 (35%), Positives = 72/130 (55%)
Query: 9 YSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTAL 64
+S FY+ GY+ C R+++ AQ Y+SLF+H +QGE D L WPF G IR T L
Sbjct: 376 HSPGFYTGKPGYKLCMRLHLQLPTAQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLTIL 435
Query: 65 NTSSEFSIT---DEIQSDK-NFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMED 120
+ SE + +EI K + +F+RP N K FG+ F+ + + R F+ +D
Sbjct: 436 D-QSEAPVRQNHEEIMDAKPDLLAFQRPT-IPRNPKGFGYVTFMHLEALRQ--RTFI-KD 490
Query: 121 DTFVIKTQVT 130
DT +++ +V+
Sbjct: 491 DTLLVRCEVS 500
>UNIPROTKB|B6CJY5 [details] [associations]
symbol:TRAF6 "TNF receptor-associated factor 6"
species:9544 "Macaca mulatta" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] [GO:0005811 "lipid particle" evidence=ISS]
[GO:0070534 "protein K63-linked ubiquitination" evidence=ISS]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR012227 InterPro:IPR027139
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144
PROSITE:PS50145 SMART:SM00061 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0005886 GO:GO:0005938 GO:GO:0048471
GO:GO:0042981 GO:GO:0050852 GO:GO:0005811 GO:GO:0046872
GO:GO:0043123 GO:GO:0008270 GO:GO:0031965 GO:GO:0045944
GO:GO:0000122 GO:GO:0051092 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0070555 GO:GO:0004842 GO:GO:0007250 InterPro:IPR017907
GO:GO:0070534 SUPFAM:SSF49599 GO:GO:0045672 GO:GO:0032743
GO:GO:0043507 GO:GO:2000679 GO:GO:0002726 CTD:7189 eggNOG:NOG289765
HOGENOM:HOG000006625 HOVERGEN:HBG060248 KO:K03175
PANTHER:PTHR10131:SF48 EMBL:EU204929 RefSeq:NP_001129268.1
UniGene:Mmu.17706 STRING:B6CJY5 GeneID:716907 KEGG:mcc:716907
NextBio:19981456 Uniprot:B6CJY5
Length = 522
Score = 170 (64.9 bits), Expect = 6.2e-12, P = 6.2e-12
Identities = 46/130 (35%), Positives = 72/130 (55%)
Query: 9 YSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTAL 64
+S FY+ GY+ C R+++ AQ Y+SLF+H +QGE D L WPF G IR T L
Sbjct: 376 HSPGFYTGKPGYKLCMRLHLQLPTAQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLTIL 435
Query: 65 NTSSEFSIT---DEIQSDK-NFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMED 120
+ SE + +EI K + +F+RP N K FG+ F+ + + R F+ +D
Sbjct: 436 D-QSEAPVRQNHEEIMDAKPDLLAFQRPT-IPRNPKGFGYVTFMHLEALRQ--RTFI-KD 490
Query: 121 DTFVIKTQVT 130
DT +++ +V+
Sbjct: 491 DTLLVRCEVS 500
>UNIPROTKB|Q9Y4K3 [details] [associations]
symbol:TRAF6 "TNF receptor-associated factor 6"
species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0001503 "ossification" evidence=IEA] [GO:0001843
"neural tube closure" evidence=IEA] [GO:0006461 "protein complex
assembly" evidence=IEA] [GO:0019886 "antigen processing and
presentation of exogenous peptide antigen via MHC class II"
evidence=IEA] [GO:0030316 "osteoclast differentiation"
evidence=IEA] [GO:0031666 "positive regulation of
lipopolysaccharide-mediated signaling pathway" evidence=IEA]
[GO:0042088 "T-helper 1 type immune response" evidence=IEA]
[GO:0042102 "positive regulation of T cell proliferation"
evidence=IEA] [GO:0042475 "odontogenesis of dentin-containing
tooth" evidence=IEA] [GO:0043011 "myeloid dendritic cell
differentiation" evidence=IEA] [GO:0045084 "positive regulation of
interleukin-12 biosynthetic process" evidence=IEA] [GO:0045410
"positive regulation of interleukin-6 biosynthetic process"
evidence=IEA] [GO:0045453 "bone resorption" evidence=IEA]
[GO:0048468 "cell development" evidence=IEA] [GO:0048661 "positive
regulation of smooth muscle cell proliferation" evidence=IEA]
[GO:0051023 "regulation of immunoglobulin secretion" evidence=IEA]
[GO:0070498 "interleukin-1-mediated signaling pathway"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0051865 "protein
autoubiquitination" evidence=IDA;TAS] [GO:0032743 "positive
regulation of interleukin-2 production" evidence=IMP] [GO:0002726
"positive regulation of T cell cytokine production" evidence=IMP]
[GO:0007250 "activation of NF-kappaB-inducing kinase activity"
evidence=IMP] [GO:0050870 "positive regulation of T cell
activation" evidence=IC] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=EXP;IDA;TAS] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0050852 "T cell receptor
signaling pathway" evidence=IMP;TAS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=IMP;IDA;TAS] [GO:0019901 "protein kinase binding"
evidence=IPI] [GO:0043422 "protein kinase B binding" evidence=IPI]
[GO:0070534 "protein K63-linked ubiquitination" evidence=IGI;IDA]
[GO:0043507 "positive regulation of JUN kinase activity"
evidence=IDA;NAS] [GO:0070555 "response to interleukin-1"
evidence=IDA] [GO:0032147 "activation of protein kinase activity"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA;TAS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0045672 "positive regulation of osteoclast differentiation"
evidence=IDA] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IDA;TAS] [GO:0042826 "histone
deacetylase binding" evidence=IPI] [GO:0031435 "mitogen-activated
protein kinase kinase kinase binding" evidence=IPI] [GO:0047485
"protein N-terminus binding" evidence=IPI] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IPI] [GO:0031996 "thioesterase
binding" evidence=IPI] [GO:0005811 "lipid particle" evidence=ISS]
[GO:0000187 "activation of MAPK activity" evidence=TAS] [GO:0002224
"toll-like receptor signaling pathway" evidence=TAS] [GO:0002755
"MyD88-dependent toll-like receptor signaling pathway"
evidence=TAS] [GO:0002756 "MyD88-independent toll-like receptor
signaling pathway" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006915 "apoptotic process" evidence=TAS]
[GO:0007249 "I-kappaB kinase/NF-kappaB cascade" evidence=TAS]
[GO:0007254 "JNK cascade" evidence=TAS] [GO:0008063 "Toll signaling
pathway" evidence=TAS] [GO:0010008 "endosome membrane"
evidence=TAS] [GO:0031293 "membrane protein intracellular domain
proteolysis" evidence=TAS] [GO:0034130 "toll-like receptor 1
signaling pathway" evidence=TAS] [GO:0034134 "toll-like receptor 2
signaling pathway" evidence=TAS] [GO:0034138 "toll-like receptor 3
signaling pathway" evidence=TAS] [GO:0034142 "toll-like receptor 4
signaling pathway" evidence=TAS] [GO:0035666 "TRIF-dependent
toll-like receptor signaling pathway" evidence=TAS] [GO:0035872
"nucleotide-binding domain, leucine rich repeat containing receptor
signaling pathway" evidence=TAS] [GO:0045087 "innate immune
response" evidence=TAS] [GO:0048011 "neurotrophin TRK receptor
signaling pathway" evidence=TAS] [GO:0051403 "stress-activated MAPK
cascade" evidence=TAS] [GO:0070423 "nucleotide-binding
oligomerization domain containing signaling pathway" evidence=TAS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA;NAS] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IMP] [GO:0009898 "internal side of plasma
membrane" evidence=ISS] [GO:0031398 "positive regulation of protein
ubiquitination" evidence=NAS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IDA] [GO:2000679 "positive regulation of
transcription regulatory region DNA binding" evidence=IDA]
[GO:0035631 "CD40 receptor complex" evidence=ISS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0031965 "nuclear membrane"
evidence=IDA] Reactome:REACT_6782 InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR027139 Pfam:PF00917
PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144 PROSITE:PS50145
SMART:SM00061 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0005829 GO:GO:0005938 GO:GO:0048471 Reactome:REACT_111102
Reactome:REACT_6900 GO:GO:0006915 GO:GO:0048011
Pathway_Interaction_DB:p75ntrpathway
Pathway_Interaction_DB:cd8tcrpathway EMBL:CH471064 GO:GO:0042981
Pathway_Interaction_DB:tcrpathway GO:GO:0019886 GO:GO:0050852
GO:GO:0042088 Pathway_Interaction_DB:bcr_5pathway GO:GO:0007254
GO:GO:0005811 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
GO:GO:0031965 GO:GO:0048661 GO:GO:0045944 GO:GO:0045087
GO:GO:0000187 GO:GO:0010008 GO:GO:0000122 GO:GO:0031293
GO:GO:0051092 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0042102
GO:GO:0001843 GO:GO:0042475 GO:GO:0045453 GO:GO:0031398
GO:GO:0070555 GO:GO:0004842 GO:GO:0001503 GO:GO:0007250
GO:GO:0009898 InterPro:IPR017907 GO:GO:0070534 GO:GO:0048468
GO:GO:0051865 GO:GO:0002755 GO:GO:0008063 GO:GO:0034130
GO:GO:0034134 GO:GO:0034138 GO:GO:0034142 GO:GO:0035666
Pathway_Interaction_DB:nfkappabcanonicalpathway
Pathway_Interaction_DB:p38_mkk3_6pathway GO:GO:0007249
SUPFAM:SSF49599 GO:GO:0043011 GO:GO:0050870 GO:GO:0035631
Pathway_Interaction_DB:p38alphabetapathway GO:GO:0045672
GO:GO:0030316 GO:GO:0070423 Pathway_Interaction_DB:il1pathway
GO:GO:0032743 GO:GO:0051023 GO:GO:0043507 GO:GO:0070498
GO:GO:0045410 GO:GO:2000679 GO:GO:0045084 GO:GO:0031666
GO:GO:0002726 EMBL:AC009656 PDB:1LB6 PDBsum:1LB6 CTD:7189
eggNOG:NOG289765 HOGENOM:HOG000006625 HOVERGEN:HBG060248 KO:K03175
OMA:SEAPIRQ OrthoDB:EOG4320XV PANTHER:PTHR10131:SF48 EMBL:U78798
EMBL:AY228337 EMBL:AK292978 EMBL:AC061999 EMBL:BC031052
IPI:IPI00743663 PIR:S71821 RefSeq:NP_004611.1 RefSeq:NP_665802.1
UniGene:Hs.444172 UniGene:Hs.591983 PDB:1LB4 PDB:1LB5 PDB:2ECI
PDB:2JMD PDB:3HCS PDB:3HCT PDB:3HCU PDBsum:1LB4 PDBsum:1LB5
PDBsum:2ECI PDBsum:2JMD PDBsum:3HCS PDBsum:3HCT PDBsum:3HCU
ProteinModelPortal:Q9Y4K3 SMR:Q9Y4K3 DIP:DIP-27515N IntAct:Q9Y4K3
MINT:MINT-88585 STRING:Q9Y4K3 PhosphoSite:Q9Y4K3 DMDM:30580642
PaxDb:Q9Y4K3 PRIDE:Q9Y4K3 DNASU:7189 Ensembl:ENST00000348124
Ensembl:ENST00000526995 GeneID:7189 KEGG:hsa:7189 UCSC:uc001mwq.2
GeneCards:GC11M036467 HGNC:HGNC:12036 HPA:CAB004605 HPA:HPA019805
HPA:HPA020599 MIM:602355 neXtProt:NX_Q9Y4K3 PharmGKB:PA36713
InParanoid:Q9Y4K3 PhylomeDB:Q9Y4K3 ChiTaRS:Traf6
EvolutionaryTrace:Q9Y4K3 GenomeRNAi:7189 NextBio:28192 Bgee:Q9Y4K3
CleanEx:HS_TRAF6 Genevestigator:Q9Y4K3 GermOnline:ENSG00000175104
Uniprot:Q9Y4K3
Length = 522
Score = 169 (64.5 bits), Expect = 8.0e-12, P = 8.0e-12
Identities = 46/130 (35%), Positives = 71/130 (54%)
Query: 9 YSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTAL 64
+S FY+ GY+ C R+++ AQ Y+SLF+H +QGE D L WPF G IR T L
Sbjct: 376 HSPGFYTGKPGYKLCMRLHLQLPTAQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLTIL 435
Query: 65 NTSSEFSIT---DEIQSDK-NFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMED 120
+ SE + +EI K +F+RP N K FG+ F+ + + R F+ +D
Sbjct: 436 D-QSEAPVRQNHEEIMDAKPELLAFQRPT-IPRNPKGFGYVTFMHLEALRQ--RTFI-KD 490
Query: 121 DTFVIKTQVT 130
DT +++ +V+
Sbjct: 491 DTLLVRCEVS 500
>UNIPROTKB|Q28DL4 [details] [associations]
symbol:traf6 "TNF receptor-associated factor 6"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0070534
"protein K63-linked ubiquitination" evidence=ISS]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR012227 InterPro:IPR027139
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144
PROSITE:PS50145 SMART:SM00061 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0005737 GO:GO:0007165 GO:GO:0042981
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 InterPro:IPR017907 GO:GO:0070534 SUPFAM:SSF49599
CTD:7189 eggNOG:NOG289765 HOGENOM:HOG000006625 HOVERGEN:HBG060248
KO:K03175 PANTHER:PTHR10131:SF48 EMBL:CR855449 EMBL:BC082342
RefSeq:NP_001008162.2 UniGene:Str.8271 ProteinModelPortal:Q28DL4
SMR:Q28DL4 STRING:Q28DL4 GeneID:493524 KEGG:xtr:493524
Xenbase:XB-GENE-480628 InParanoid:Q641J5 Uniprot:Q28DL4
Length = 558
Score = 169 (64.5 bits), Expect = 9.0e-12, P = 9.0e-12
Identities = 44/133 (33%), Positives = 72/133 (54%)
Query: 9 YSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTAL 64
+S FY+ GY+ C R+++ AQ Y+SLF+H +QGE D +L WP G IR + L
Sbjct: 412 HSQGFYTGKPGYKLCLRLHLQLPSAQRCANYISLFVHTMQGEYDSLLPWPLQGTIRLSIL 471
Query: 65 NTSSEFSITD--EIQSDK-NFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDD 121
+ S ++ D E+ K +F+RP N K FG+ F+ + + R ++ ++D
Sbjct: 472 DQSEGVAMQDQEEVMDTKPELLAFQRPT-VARNPKGFGYVTFMHLQALKQ--RQYV-KND 527
Query: 122 TFVIKTQVTEMTH 134
T +++ VT TH
Sbjct: 528 TLLVRCSVT--TH 538
>UNIPROTKB|E1C626 [details] [associations]
symbol:TRAF6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004871 "signal transducer activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0042981
"regulation of apoptotic process" evidence=IEA] [GO:0051865
"protein autoubiquitination" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0001503 "ossification" evidence=IEA] [GO:0001843
"neural tube closure" evidence=IEA] [GO:0002726 "positive
regulation of T cell cytokine production" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005811
"lipid particle" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0007249 "I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0009898 "internal side of plasma membrane" evidence=IEA]
[GO:0019886 "antigen processing and presentation of exogenous
peptide antigen via MHC class II" evidence=IEA] [GO:0030316
"osteoclast differentiation" evidence=IEA] [GO:0031435
"mitogen-activated protein kinase kinase kinase binding"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031666 "positive regulation of
lipopolysaccharide-mediated signaling pathway" evidence=IEA]
[GO:0031965 "nuclear membrane" evidence=IEA] [GO:0031996
"thioesterase binding" evidence=IEA] [GO:0032743 "positive
regulation of interleukin-2 production" evidence=IEA] [GO:0035631
"CD40 receptor complex" evidence=IEA] [GO:0042088 "T-helper 1 type
immune response" evidence=IEA] [GO:0042102 "positive regulation of
T cell proliferation" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0042826 "histone
deacetylase binding" evidence=IEA] [GO:0043011 "myeloid dendritic
cell differentiation" evidence=IEA] [GO:0043123 "positive
regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0043422 "protein kinase B binding" evidence=IEA] [GO:0043507
"positive regulation of JUN kinase activity" evidence=IEA]
[GO:0045084 "positive regulation of interleukin-12 biosynthetic
process" evidence=IEA] [GO:0045410 "positive regulation of
interleukin-6 biosynthetic process" evidence=IEA] [GO:0045453 "bone
resorption" evidence=IEA] [GO:0045672 "positive regulation of
osteoclast differentiation" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0048468 "cell development" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0050852 "T cell receptor signaling pathway" evidence=IEA]
[GO:0051023 "regulation of immunoglobulin secretion" evidence=IEA]
[GO:0051092 "positive regulation of NF-kappaB transcription factor
activity" evidence=IEA] [GO:0070498 "interleukin-1-mediated
signaling pathway" evidence=IEA] [GO:0070534 "protein K63-linked
ubiquitination" evidence=IEA] [GO:2000679 "positive regulation of
transcription regulatory region DNA binding" evidence=IEA]
[GO:0002218 "activation of innate immune response" evidence=TAS]
[GO:0002224 "toll-like receptor signaling pathway" evidence=TAS]
[GO:0002755 "MyD88-dependent toll-like receptor signaling pathway"
evidence=TAS] [GO:0007250 "activation of NF-kappaB-inducing kinase
activity" evidence=TAS] [GO:0034134 "toll-like receptor 2 signaling
pathway" evidence=TAS] [GO:0034138 "toll-like receptor 3 signaling
pathway" evidence=TAS] [GO:0034142 "toll-like receptor 4 signaling
pathway" evidence=TAS] [GO:0034146 "toll-like receptor 5 signaling
pathway" evidence=TAS] [GO:0034154 "toll-like receptor 7 signaling
pathway" evidence=TAS] [GO:0035419 "activation of MAPK activity
involved in innate immune response" evidence=TAS] [GO:0035681
"toll-like receptor 15 signaling pathway" evidence=TAS] [GO:0035682
"toll-like receptor 21 signaling pathway" evidence=TAS]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR012227 InterPro:IPR027139
Pfam:PF00917 Pfam:PF13639 PIRSF:PIRSF015614 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
Prosite:PS00518 GO:GO:0005829 GO:GO:0048471 GO:GO:0042981
GO:GO:0019886 GO:GO:0050852 GO:GO:0042088 GO:GO:0046872
GO:GO:0043123 GO:GO:0008270 GO:GO:0031965 GO:GO:0045944
GO:GO:0000122 GO:GO:0035419 GO:GO:0051092 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0042102 GO:GO:0004842 GO:GO:0007250
GO:GO:0009898 InterPro:IPR017907 GO:GO:0070534 GO:GO:0002755
GO:GO:0034134 GO:GO:0034138 GO:GO:0034142 GO:GO:0007249
Reactome:REACT_102124 SUPFAM:SSF49599 GO:GO:0035631 GO:GO:0045672
GO:GO:0032743 GO:GO:0051023 GO:GO:0043507 GO:GO:0070498
GO:GO:0045410 Reactome:REACT_147795 GO:GO:0035681 GO:GO:0034146
GO:GO:2000679 GO:GO:0045084 GO:GO:0035682 GO:GO:0034154
GO:GO:0031666 GO:GO:0002726 GeneTree:ENSGT00550000074359
OMA:SEAPIRQ PANTHER:PTHR10131:SF48 EMBL:AADN02033086
IPI:IPI00571717 Ensembl:ENSGALT00000012888 Uniprot:E1C626
Length = 548
Score = 168 (64.2 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 44/128 (34%), Positives = 69/128 (53%)
Query: 9 YSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTAL 64
+S FY+ GY+ C R++I AQ ++SLF+H +QGE D L WPF G IR + L
Sbjct: 402 HSPGFYTGKPGYKLCLRLHIQLPSAQRCANFISLFVHTMQGEYDSHLPWPFQGTIRLSIL 461
Query: 65 NTSS--EFSITDEIQSDK-NFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDD 121
+ S E +E+ K +F+RP N K FG+ F+ + + R F+ +DD
Sbjct: 462 DQSEGPERQNHEEVMEAKPELLAFQRPT-IHRNPKGFGYVTFMHLQTLKQ--RTFV-KDD 517
Query: 122 TFVIKTQV 129
T +++ +V
Sbjct: 518 TLLVRCEV 525
>UNIPROTKB|F5H1P7 [details] [associations]
symbol:TRAF5 "TNF receptor-associated factor 5"
species:9606 "Homo sapiens" [GO:0007165 "signal transduction"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0042981 "regulation of apoptotic process" evidence=IEA]
[GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB
cascade" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR012227
InterPro:IPR027130 Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089
PROSITE:PS50144 SMART:SM00061 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0007165 GO:GO:0042981 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 SUPFAM:SSF49599 EMBL:AL590101 HGNC:HGNC:12035
ChiTaRS:TRAF5 PANTHER:PTHR10131:SF23 IPI:IPI00982254
ProteinModelPortal:F5H1P7 SMR:F5H1P7 Ensembl:ENST00000427925
UCSC:uc010psy.2 ArrayExpress:F5H1P7 Bgee:F5H1P7 Uniprot:F5H1P7
Length = 451
Score = 165 (63.1 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 41/124 (33%), Positives = 67/124 (54%)
Query: 9 YSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWPFVGRIRFTALN 65
+S FY+S GYR C R ++ + + +LSL+ +++GE D +L WPF R+ L+
Sbjct: 323 FSQSFYTSRCGYRLCARAYLNGDGSGRGSHLSLYFVVMRGEFDSLLQWPFRQRVTLMLLD 382
Query: 66 TSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVI 125
S + +I + + D N SFKRP + +N A G F+ VL+ + ++DDT +
Sbjct: 383 QSGKKNIMETFKPDPNSSSFKRP-DGEMNI-ASGCPRFV-AHSVLENAKNAYIKDDTLFL 439
Query: 126 KTQV 129
K V
Sbjct: 440 KVAV 443
>UNIPROTKB|O00463 [details] [associations]
symbol:TRAF5 "TNF receptor-associated factor 5"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0008284
"positive regulation of cell proliferation" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0043123 "positive
regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEP]
[GO:0005813 "centrosome" evidence=IDA] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0031996 "thioesterase binding"
evidence=IPI] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0051091 "positive regulation of sequence-specific DNA binding
transcription factor activity" evidence=IMP] [GO:0009898 "internal
side of plasma membrane" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=IMP] [GO:0035631 "CD40 receptor complex" evidence=ISS]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR012227
InterPro:IPR013323 InterPro:IPR027130 Pfam:PF00917
PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144 PROSITE:PS50145
SMART:SM00061 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
GO:GO:0005737 GO:GO:0005813 GO:GO:0006915 GO:GO:0007165
EMBL:CH471100 GO:GO:0042981 GO:GO:0046872 GO:GO:0043123
GO:GO:0008270 GO:GO:0051092 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0009898 InterPro:IPR017907 SUPFAM:SSF49599
GO:GO:0035631 Gene3D:3.90.890.10 EMBL:AL590101 HOVERGEN:HBG058222
eggNOG:NOG239194 EMBL:AB000509 EMBL:CR536557 EMBL:BC029600
EMBL:U69108 IPI:IPI00005760 PIR:JC6539 RefSeq:NP_001029082.1
RefSeq:NP_004610.1 RefSeq:NP_665702.1 UniGene:Hs.523930
ProteinModelPortal:O00463 SMR:O00463 IntAct:O00463 STRING:O00463
PhosphoSite:O00463 PaxDb:O00463 PRIDE:O00463 DNASU:7188
Ensembl:ENST00000261464 Ensembl:ENST00000336184
Ensembl:ENST00000367004 GeneID:7188 KEGG:hsa:7188 UCSC:uc001hih.3
CTD:7188 GeneCards:GC01P211499 HGNC:HGNC:12035 HPA:CAB010277
HPA:HPA008052 MIM:602356 neXtProt:NX_O00463 PharmGKB:PA36712
InParanoid:O00463 KO:K09849 OMA:IDKSAWL OrthoDB:EOG4JWVD2
PhylomeDB:O00463 ChiTaRS:TRAF5 GenomeRNAi:7188 NextBio:28184
ArrayExpress:O00463 Bgee:O00463 CleanEx:HS_TRAF5
Genevestigator:O00463 GermOnline:ENSG00000082512
PANTHER:PTHR10131:SF23 Uniprot:O00463
Length = 557
Score = 165 (63.1 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 41/124 (33%), Positives = 67/124 (54%)
Query: 9 YSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWPFVGRIRFTALN 65
+S FY+S GYR C R ++ + + +LSL+ +++GE D +L WPF R+ L+
Sbjct: 429 FSQSFYTSRCGYRLCARAYLNGDGSGRGSHLSLYFVVMRGEFDSLLQWPFRQRVTLMLLD 488
Query: 66 TSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVI 125
S + +I + + D N SFKRP + +N A G F+ VL+ + ++DDT +
Sbjct: 489 QSGKKNIMETFKPDPNSSSFKRP-DGEMNI-ASGCPRFV-AHSVLENAKNAYIKDDTLFL 545
Query: 126 KTQV 129
K V
Sbjct: 546 KVAV 549
>ZFIN|ZDB-GENE-030131-5735 [details] [associations]
symbol:traf6 "TNF receptor-associated factor 6"
species:7955 "Danio rerio" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0045672 "positive regulation of osteoclast
differentiation" evidence=IEA] [GO:0050852 "T cell receptor
signaling pathway" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA;ISS] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0001503 "ossification" evidence=IEA] [GO:0031666
"positive regulation of lipopolysaccharide-mediated signaling
pathway" evidence=IEA] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0046849 "bone
remodeling" evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0007250 "activation of NF-kappaB-inducing kinase
activity" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0043507 "positive regulation of JUN kinase
activity" evidence=IEA] [GO:0048468 "cell development"
evidence=IEA] [GO:0070498 "interleukin-1-mediated signaling
pathway" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016874
"ligase activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0009617 "response to bacterium" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0009615 "response to virus" evidence=IDA]
[GO:0045087 "innate immune response" evidence=IMP]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR012227 InterPro:IPR013323
InterPro:IPR027139 Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 ZFIN:ZDB-GENE-030131-5735
GO:GO:0005737 GO:GO:0007165 GO:GO:0045893 GO:GO:0009617
GO:GO:0042981 GO:GO:0046872 GO:GO:0008270 GO:GO:0045087
GO:GO:0009615 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 SUPFAM:SSF49599 Gene3D:3.90.890.10
GeneTree:ENSGT00550000074359 CTD:7189 eggNOG:NOG289765
HOGENOM:HOG000006625 HOVERGEN:HBG060248 KO:K03175 OrthoDB:EOG4320XV
PANTHER:PTHR10131:SF48 EMBL:AY616583 EMBL:AL929208 EMBL:BC055214
EMBL:BC171483 EMBL:BC171487 IPI:IPI00610824 RefSeq:NP_001038217.1
UniGene:Dr.74618 ProteinModelPortal:Q6IWL4 SMR:Q6IWL4 STRING:Q6IWL4
Ensembl:ENSDART00000038273 GeneID:554561 KEGG:dre:554561
InParanoid:Q7SXX1 OMA:NECGAVM NextBio:20880774 Bgee:Q6IWL4
Uniprot:Q6IWL4
Length = 542
Score = 162 (62.1 bits), Expect = 4.9e-11, P = 4.9e-11
Identities = 38/126 (30%), Positives = 65/126 (51%)
Query: 9 YSACFYSSCFGYRFCTRVNISREDA----QYLSLFIHLVQGENDDILDWPFVGRIRFTAL 64
+S FY+ GY+ C R+++ A ++SLF+H +QGE D L WP G IR L
Sbjct: 400 HSPPFYTGRPGYKLCLRLHLQTPSAPRCSNFISLFVHTMQGEFDSQLSWPLQGTIRLAVL 459
Query: 65 NTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 124
+ + +++ + +F+RP N K FG+ F+ + + RGF+ ED +
Sbjct: 460 DQVEGQHHIEVMETKPDLQAFQRPT-VMRNPKGFGYVTFLHLQALRQ--RGFVKED-VLL 515
Query: 125 IKTQVT 130
++ +VT
Sbjct: 516 VRCEVT 521
>UNIPROTKB|Q6DJN2 [details] [associations]
symbol:traf6-b "TNF receptor-associated factor 6-B"
species:8355 "Xenopus laevis" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007250 "activation of NF-kappaB-inducing kinase activity"
evidence=IDA] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR012227
InterPro:IPR027139 Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005737 GO:GO:0042981
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0007250 InterPro:IPR017907 GO:GO:0070534
SUPFAM:SSF49599 HOVERGEN:HBG060248 KO:K03175 PANTHER:PTHR10131:SF48
EMBL:BC075143 RefSeq:NP_001086348.1 UniGene:Xl.29694
ProteinModelPortal:Q6DJN2 SMR:Q6DJN2 GeneID:444777 KEGG:xla:444777
CTD:444777 Xenbase:XB-GENE-865394 Uniprot:Q6DJN2
Length = 556
Score = 161 (61.7 bits), Expect = 6.5e-11, P = 6.5e-11
Identities = 42/123 (34%), Positives = 64/123 (52%)
Query: 9 YSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTAL 64
+S FY+ GY+ C R+++ AQ Y+SLF+H +QGE D +L WP G IR + L
Sbjct: 410 HSPGFYTGKPGYKLCLRLHLQLPSAQRCANYISLFVHTMQGEYDSLLPWPLHGTIRLSIL 469
Query: 65 NTSSEFSITD--EIQSDK-NFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDD 121
+ S I D E+ K + +F+RP N K FG+ F+ + + R ++ D
Sbjct: 470 DQSEGAIIQDQEEVMDTKPDLLAFQRPTTQ-RNPKGFGYVTFMHLNTLKQ--RQYVKNDT 526
Query: 122 TFV 124
FV
Sbjct: 527 LFV 529
>UNIPROTKB|F1NLM1 [details] [associations]
symbol:F1NLM1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007165 "signal transduction" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0031996 "thioesterase
binding" evidence=IEA] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0051092 "positive regulation of
NF-kappaB transcription factor activity" evidence=IEA]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR012227
InterPro:IPR027136 Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 GO:GO:0007165 GO:GO:0042981
GO:GO:0046872 GO:GO:0008270 GO:GO:0051092 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 SUPFAM:SSF49599
PANTHER:PTHR10131:SF29 GeneTree:ENSGT00550000074359 OMA:DHLENGC
EMBL:AADN02026377 EMBL:AADN02026378 IPI:IPI00590143
Ensembl:ENSGALT00000002404 Uniprot:F1NLM1
Length = 504
Score = 159 (61.0 bits), Expect = 9.0e-11, P = 9.0e-11
Identities = 36/119 (30%), Positives = 65/119 (54%)
Query: 9 YSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFVGRIRFTALN 65
YS FY++ +GY+ C R+ ++ + ++SLF +++G+ D +L WPF ++ F L+
Sbjct: 379 YSPAFYTAKYGYKVCLRIYLNGDGMGKGTHVSLFFVVMKGDYDALLPWPFRHKVTFMLLD 438
Query: 66 TSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 124
++ I D + D SF+RPVN +N A G F+ + + P ++ ED F+
Sbjct: 439 QNNREHIIDAFRPDLASASFQRPVND-MNV-ASGCPTFLPLTKLQSPKHAYVKEDTLFL 495
>UNIPROTKB|Q3MV19 [details] [associations]
symbol:traf6-a "TNF receptor-associated factor 6-A"
species:8355 "Xenopus laevis" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007250 "activation of NF-kappaB-inducing kinase activity"
evidence=IDA] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR012227
InterPro:IPR027139 Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005737 GO:GO:0042981
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0007250 InterPro:IPR017907 GO:GO:0070534
SUPFAM:SSF49599 HOVERGEN:HBG060248 KO:K03175 PANTHER:PTHR10131:SF48
EMBL:AB100960 EMBL:BC108562 RefSeq:NP_001089863.1 UniGene:Xl.14682
ProteinModelPortal:Q3MV19 SMR:Q3MV19 GeneID:734929 KEGG:xla:734929
CTD:734929 Xenbase:XB-GENE-6254727 Uniprot:Q3MV19
Length = 556
Score = 158 (60.7 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 40/128 (31%), Positives = 70/128 (54%)
Query: 9 YSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTAL 64
+S FY+ GY+ C R+++ AQ Y+SLF+H +QG+ D +L WP G IR + L
Sbjct: 410 HSPGFYTGDPGYKLCLRLHLQLPSAQRCANYISLFVHTMQGDYDSLLPWPLQGTIRLSIL 469
Query: 65 NTSSEFSITDEIQ-SDKNFD--SFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDD 121
+ S + D+++ D D +F+RP N K FG+ F+ + + R ++ ++D
Sbjct: 470 DQSESTARQDQVEVMDTKPDLLAFQRPTAP-RNPKGFGYVTFMHLNTLKQ--RQYV-KND 525
Query: 122 TFVIKTQV 129
T +++ V
Sbjct: 526 TLLVRCSV 533
>UNIPROTKB|E1BMI8 [details] [associations]
symbol:TRAF1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051092 "positive regulation of NF-kappaB transcription
factor activity" evidence=IEA] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0031996 "thioesterase binding"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IEA] InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR012227 InterPro:IPR027136
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50144 SMART:SM00061
GO:GO:0007165 GO:GO:0042981 GO:GO:0008270 GO:GO:0051092
SUPFAM:SSF49599 CTD:7185 KO:K03172 OMA:RRCHESA
PANTHER:PTHR10131:SF29 GeneTree:ENSGT00550000074359
EMBL:DAAA02024787 IPI:IPI00843279 RefSeq:NP_001179730.1
UniGene:Bt.42593 PRIDE:E1BMI8 Ensembl:ENSBTAT00000043659
GeneID:540944 KEGG:bta:540944 NextBio:20878924 Uniprot:E1BMI8
Length = 415
Score = 154 (59.3 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 38/128 (29%), Positives = 66/128 (51%)
Query: 9 YSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWPFVGRIRFTALN 65
+S FY++ +GY+ C R+ ++ + +LSLFI +++GE D +L WPF ++ F L+
Sbjct: 291 FSPAFYTAKYGYKLCLRLYLNGDGTGKRTHLSLFIVIMRGEYDALLPWPFRNKVTFMLLD 350
Query: 66 TSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVI 125
++ D + D N SF+RP + A G F + + P ++ +DDT +
Sbjct: 351 QNNREHAIDAFRPDLNSASFQRPQSE--TNVASGCPLFFPLNKLQSPKHAYV-KDDTMFV 407
Query: 126 KTQVTEMT 133
K V T
Sbjct: 408 KCVVDTNT 415
>ZFIN|ZDB-GENE-030131-5345 [details] [associations]
symbol:traf2b "Tnf receptor-associated factor 2b"
species:7955 "Danio rerio" [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0007250 "activation of NF-kappaB-inducing kinase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0033209 "tumor necrosis factor-mediated signaling
pathway" evidence=IEA] [GO:0046328 "regulation of JNK cascade"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR012227 InterPro:IPR027133
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144
PROSITE:PS50145 SMART:SM00061 SMART:SM00184 Pfam:PF00097
ZFIN:ZDB-GENE-030131-5345 GO:GO:0007165 GO:GO:0042981 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 SUPFAM:SSF49599
GeneTree:ENSGT00550000074359 PANTHER:PTHR10131:SF21 EMBL:BX294186
IPI:IPI00773417 Ensembl:ENSDART00000074731 Uniprot:E9QI92
Length = 532
Score = 154 (59.3 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 39/128 (30%), Positives = 70/128 (54%)
Query: 9 YSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWPFVGRIRFTALN 65
+S FYSS +GY+ C R+ ++ + +LSLF +++G+ D +L WPF ++ L+
Sbjct: 408 FSPAFYSSKYGYKMCLRLYLNGDGTGRGSHLSLFFVVMKGKYDALLKWPFSQKVTLMLLD 467
Query: 66 TSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVI 125
++ I D + D + SF+RP++ +N A G F +A + G+ + DDT I
Sbjct: 468 QNNREHIIDAFRPDVSSTSFQRPISE-MNI-ASGCPLFCPLAKLA--GKSSYLRDDTIFI 523
Query: 126 KTQVTEMT 133
K + ++T
Sbjct: 524 KA-IVDLT 530
>UNIPROTKB|K7GLK8 [details] [associations]
symbol:LOC100156979 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0050688 "regulation of defense response to virus"
evidence=IEA] [GO:0045087 "innate immune response" evidence=IEA]
[GO:0042981 "regulation of apoptotic process" evidence=IEA]
[GO:0033209 "tumor necrosis factor-mediated signaling pathway"
evidence=IEA] [GO:0032088 "negative regulation of NF-kappaB
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008063 "Toll signaling pathway"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0001817 "regulation of cytokine production"
evidence=IEA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR012227
InterPro:IPR013323 InterPro:IPR027128 Pfam:PF00917
PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144 PROSITE:PS50145
SMART:SM00061 SMART:SM00184 Prosite:PS00518 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 SUPFAM:SSF49599
Gene3D:3.90.890.10 GeneTree:ENSGT00550000074359
PANTHER:PTHR10131:SF45 EMBL:CT998550 Ensembl:ENSSSCT00000034635
Uniprot:K7GLK8
Length = 512
Score = 153 (58.9 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 43/125 (34%), Positives = 65/125 (52%)
Query: 9 YSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFVGRIRFTALN 65
YS FY+ FGY+ C RV ++ + +LSLF +++GE D +L WPF ++ ++
Sbjct: 385 YSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMD 444
Query: 66 T-SSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 124
SS + D + D N SFK+P +N A G F+ VL+ G ++DDT
Sbjct: 445 QGSSRRHLGDAFKPDPNSSSFKKPTGE-MNI-ASGCPVFV-AQTVLE--NGTYIKDDTIF 499
Query: 125 IKTQV 129
IK V
Sbjct: 500 IKVIV 504
>RGD|1304633 [details] [associations]
symbol:Traf3 "Tnf receptor-associated factor 3" species:10116
"Rattus norvegicus" [GO:0001817 "regulation of cytokine production"
evidence=IEA;ISO] [GO:0002224 "toll-like receptor signaling
pathway" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008063 "Toll signaling pathway" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0009898 "internal side of plasma membrane"
evidence=ISO] [GO:0019901 "protein kinase binding" evidence=ISO]
[GO:0030162 "regulation of proteolysis" evidence=ISO] [GO:0031625
"ubiquitin protein ligase binding" evidence=ISO] [GO:0031996
"thioesterase binding" evidence=ISO] [GO:0032088 "negative
regulation of NF-kappaB transcription factor activity"
evidence=IEA;ISO] [GO:0032648 "regulation of interferon-beta
production" evidence=ISO] [GO:0033209 "tumor necrosis
factor-mediated signaling pathway" evidence=IEA;ISO] [GO:0035631
"CD40 receptor complex" evidence=ISO] [GO:0042981 "regulation of
apoptotic process" evidence=IEA] [GO:0045087 "innate immune
response" evidence=IEA] [GO:0050688 "regulation of defense response
to virus" evidence=IEA;ISO] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR012227
InterPro:IPR013323 InterPro:IPR027128 Pfam:PF00917
PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144 PROSITE:PS50145
SMART:SM00061 SMART:SM00184 RGD:1304633 Prosite:PS00518
GO:GO:0007165 GO:GO:0042981 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10
PANTHER:PTHR10131:SF45 IPI:IPI00948829 Ensembl:ENSRNOT00000064527
UCSC:RGD:1304633 ArrayExpress:D3ZK50 Uniprot:D3ZK50
Length = 542
Score = 153 (58.9 bits), Expect = 4.5e-10, P = 4.5e-10
Identities = 43/125 (34%), Positives = 65/125 (52%)
Query: 9 YSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFVGRIRFTALN 65
YS FY+ FGY+ C RV ++ + +LSLF +++GE D +L WPF ++ ++
Sbjct: 415 YSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMD 474
Query: 66 T-SSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 124
SS + D + D N SFK+P +N A G F+ VL+ G ++DDT
Sbjct: 475 QGSSRRHLGDAFKPDPNSSSFKKPTGE-MNI-ASGCPVFV-AQTVLE--NGTYIKDDTIF 529
Query: 125 IKTQV 129
IK V
Sbjct: 530 IKVIV 534
>UNIPROTKB|A6NHG8 [details] [associations]
symbol:TRAF3 "TNF receptor-associated factor 3"
species:9606 "Homo sapiens" [GO:0001817 "regulation of cytokine
production" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0008063 "Toll signaling pathway"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0032088 "negative regulation of NF-kappaB transcription factor
activity" evidence=IEA] [GO:0033209 "tumor necrosis factor-mediated
signaling pathway" evidence=IEA] [GO:0042981 "regulation of
apoptotic process" evidence=IEA] [GO:0045087 "innate immune
response" evidence=IEA] [GO:0050688 "regulation of defense response
to virus" evidence=IEA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR012227
InterPro:IPR013323 InterPro:IPR027128 Pfam:PF00917
PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144 PROSITE:PS50145
SMART:SM00061 SMART:SM00184 Prosite:PS00518 GO:GO:0007165
GO:GO:0042981 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 EMBL:AL117209 InterPro:IPR017907
SUPFAM:SSF49599 Gene3D:3.90.890.10 HOVERGEN:HBG058222
RefSeq:NP_663778.1 UniGene:Hs.510528 GeneID:7187 KEGG:hsa:7187
CTD:7187 HGNC:HGNC:12033 PharmGKB:PA36710 KO:K03174 ChiTaRS:TRAF3
GenomeRNAi:7187 NextBio:28176 PANTHER:PTHR10131:SF45
HOGENOM:HOG000231557 EMBL:AL132801 IPI:IPI00744216 SMR:A6NHG8
STRING:A6NHG8 Ensembl:ENST00000347662 Ensembl:ENST00000351691
UCSC:uc001yme.2 Uniprot:A6NHG8
Length = 543
Score = 153 (58.9 bits), Expect = 4.5e-10, P = 4.5e-10
Identities = 43/125 (34%), Positives = 65/125 (52%)
Query: 9 YSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFVGRIRFTALN 65
YS FY+ FGY+ C RV ++ + +LSLF +++GE D +L WPF ++ ++
Sbjct: 416 YSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMD 475
Query: 66 T-SSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 124
SS + D + D N SFK+P +N A G F+ VL+ G ++DDT
Sbjct: 476 QGSSRRHLGDAFKPDPNSSSFKKPTGE-MNI-ASGCPVFV-AQTVLE--NGTYIKDDTIF 530
Query: 125 IKTQV 129
IK V
Sbjct: 531 IKVIV 535
>UNIPROTKB|K7GKN5 [details] [associations]
symbol:LOC100156979 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0050688 "regulation of defense response to virus"
evidence=IEA] [GO:0045087 "innate immune response" evidence=IEA]
[GO:0042981 "regulation of apoptotic process" evidence=IEA]
[GO:0033209 "tumor necrosis factor-mediated signaling pathway"
evidence=IEA] [GO:0032088 "negative regulation of NF-kappaB
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008063 "Toll signaling pathway"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0001817 "regulation of cytokine production"
evidence=IEA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR012227
InterPro:IPR013323 InterPro:IPR027128 Pfam:PF00917
PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144 PROSITE:PS50145
SMART:SM00061 SMART:SM00184 Prosite:PS00518 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 SUPFAM:SSF49599
Gene3D:3.90.890.10 GeneTree:ENSGT00550000074359
PANTHER:PTHR10131:SF45 EMBL:CT998550 Ensembl:ENSSSCT00000033228
Uniprot:K7GKN5
Length = 543
Score = 153 (58.9 bits), Expect = 4.5e-10, P = 4.5e-10
Identities = 43/125 (34%), Positives = 65/125 (52%)
Query: 9 YSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFVGRIRFTALN 65
YS FY+ FGY+ C RV ++ + +LSLF +++GE D +L WPF ++ ++
Sbjct: 416 YSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMD 475
Query: 66 T-SSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 124
SS + D + D N SFK+P +N A G F+ VL+ G ++DDT
Sbjct: 476 QGSSRRHLGDAFKPDPNSSSFKKPTGE-MNI-ASGCPVFV-AQTVLE--NGTYIKDDTIF 530
Query: 125 IKTQV 129
IK V
Sbjct: 531 IKVIV 535
>UNIPROTKB|Q13077 [details] [associations]
symbol:TRAF1 "TNF receptor-associated factor 1"
species:9606 "Homo sapiens" [GO:0007165 "signal transduction"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0042981 "regulation of apoptotic
process" evidence=IDA] [GO:0051092 "positive regulation of
NF-kappaB transcription factor activity" evidence=IDA] [GO:0043123
"positive regulation of I-kappaB kinase/NF-kappaB cascade"
evidence=RCA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IPI] [GO:0031996 "thioesterase binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=TAS] [GO:0006461 "protein complex
assembly" evidence=TAS] InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR027136 Pfam:PF00917
PIRSF:PIRSF015614 PROSITE:PS50144 SMART:SM00061 GO:GO:0005737
GO:GO:0006915 GO:GO:0007165 GO:GO:0006461 GO:GO:0042981
GO:GO:0008270 EMBL:CH471090 Pathway_Interaction_DB:tnfpathway
GO:GO:0051092 Pathway_Interaction_DB:hivnefpathway SUPFAM:SSF49599
PDB:3M0D PDBsum:3M0D EMBL:U19261 EMBL:AK090468 EMBL:AK295959
EMBL:AK315476 EMBL:AL832989 EMBL:BT019408 EMBL:AC006430
EMBL:BC024145 IPI:IPI00011549 IPI:IPI00984225 PIR:B55649
RefSeq:NP_001177874.1 RefSeq:NP_001177876.1 RefSeq:NP_005649.1
UniGene:Hs.531251 ProteinModelPortal:Q13077 SMR:Q13077
DIP:DIP-27514N IntAct:Q13077 MINT:MINT-1131534 STRING:Q13077
PhosphoSite:Q13077 DMDM:6707734 PaxDb:Q13077 PRIDE:Q13077
DNASU:7185 Ensembl:ENST00000373887 Ensembl:ENST00000540010
Ensembl:ENST00000546084 GeneID:7185 KEGG:hsa:7185 UCSC:uc004bku.2
CTD:7185 GeneCards:GC09M123664 HGNC:HGNC:12031 HPA:CAB009593
HPA:HPA001852 MIM:601711 neXtProt:NX_Q13077 PharmGKB:PA36708
eggNOG:NOG264247 HOGENOM:HOG000231558 HOVERGEN:HBG058222
InParanoid:Q13077 KO:K03172 OMA:RRCHESA OrthoDB:EOG42Z4Q6
PhylomeDB:Q13077 EvolutionaryTrace:Q13077 GenomeRNAi:7185
NextBio:28168 PMAP-CutDB:Q13077 ArrayExpress:Q13077 Bgee:Q13077
CleanEx:HS_TRAF1 Genevestigator:Q13077 GermOnline:ENSG00000056558
PANTHER:PTHR10131:SF29 Uniprot:Q13077
Length = 416
Score = 151 (58.2 bits), Expect = 4.7e-10, P = 4.7e-10
Identities = 37/128 (28%), Positives = 67/128 (52%)
Query: 9 YSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWPFVGRIRFTALN 65
+S FY++ +GY+ C R+ ++ + +LSLFI +++GE D +L WPF ++ F L+
Sbjct: 292 FSPAFYTAKYGYKLCLRLYLNGDGTGKRTHLSLFIVIMRGEYDALLPWPFRNKVTFMLLD 351
Query: 66 TSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVI 125
++ D + D + SF+RP + A G F ++ + P ++ +DDT +
Sbjct: 352 QNNREHAIDAFRPDLSSASFQRPQSE--TNVASGCPLFFPLSKLQSPKHAYV-KDDTMFL 408
Query: 126 KTQVTEMT 133
K V T
Sbjct: 409 KCIVETST 416
>MGI|MGI:108041 [details] [associations]
symbol:Traf3 "TNF receptor-associated factor 3" species:10090
"Mus musculus" [GO:0001817 "regulation of cytokine production"
evidence=IMP] [GO:0002224 "toll-like receptor signaling pathway"
evidence=IMP] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005768 "endosome"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0009898 "internal side of plasma
membrane" evidence=IDA] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IPI] [GO:0030162
"regulation of proteolysis" evidence=ISO;IDA;IMP] [GO:0031625
"ubiquitin protein ligase binding" evidence=ISO] [GO:0031996
"thioesterase binding" evidence=ISO] [GO:0032088 "negative
regulation of NF-kappaB transcription factor activity"
evidence=ISO;IMP;TAS] [GO:0032648 "regulation of interferon-beta
production" evidence=IMP] [GO:0033209 "tumor necrosis
factor-mediated signaling pathway" evidence=ISO;IMP] [GO:0035631
"CD40 receptor complex" evidence=IDA] [GO:0042981 "regulation of
apoptotic process" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0050688 "regulation of defense response to virus"
evidence=IMP] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR012227
InterPro:IPR013323 InterPro:IPR027128 Pfam:PF00917
PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144 PROSITE:PS50145
SMART:SM00061 SMART:SM00184 EMBL:U33840 MGI:MGI:108041
Prosite:PS00518 GO:GO:0006915 GO:GO:0042981 GO:GO:0046872
GO:GO:0005768 GO:GO:0008270 GO:GO:0030162 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0032088 GO:GO:0033209 GO:GO:0004842
EMBL:CH466549 GO:GO:0009898 InterPro:IPR017907 SUPFAM:SSF49599
GO:GO:0002224 GO:GO:0035631 GO:GO:0050688 Gene3D:3.90.890.10
PDB:4GHU PDBsum:4GHU GO:GO:0032648 HOVERGEN:HBG058222
GeneTree:ENSGT00550000074359 CTD:7187 eggNOG:NOG239194 KO:K03174
OMA:YGCTFQG OrthoDB:EOG4JWVD7 PANTHER:PTHR10131:SF45 EMBL:U21050
EMBL:BC137634 EMBL:BC137635 IPI:IPI00310635 PIR:I49272
RefSeq:NP_035762.2 UniGene:Mm.27431 ProteinModelPortal:Q60803
SMR:Q60803 DIP:DIP-34050N IntAct:Q60803 MINT:MINT-1506326
STRING:Q60803 PhosphoSite:Q60803 PaxDb:Q60803 PRIDE:Q60803
Ensembl:ENSMUST00000021706 GeneID:22031 KEGG:mmu:22031
HOGENOM:HOG000231557 InParanoid:B2RPW3 NextBio:301784 Bgee:Q60803
CleanEx:MM_TRAF3 Genevestigator:Q60803
GermOnline:ENSMUSG00000021277 Uniprot:Q60803
Length = 567
Score = 153 (58.9 bits), Expect = 4.9e-10, P = 4.9e-10
Identities = 43/125 (34%), Positives = 65/125 (52%)
Query: 9 YSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFVGRIRFTALN 65
YS FY+ FGY+ C RV ++ + +LSLF +++GE D +L WPF ++ ++
Sbjct: 440 YSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMD 499
Query: 66 T-SSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 124
SS + D + D N SFK+P +N A G F+ VL+ G ++DDT
Sbjct: 500 QGSSRRHLGDAFKPDPNSSSFKKPTGE-MNI-ASGCPVFV-AQTVLE--NGTYIKDDTIF 554
Query: 125 IKTQV 129
IK V
Sbjct: 555 IKVIV 559
>UNIPROTKB|E1BBH2 [details] [associations]
symbol:TRAF3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050688 "regulation of defense response to virus"
evidence=IEA] [GO:0035631 "CD40 receptor complex" evidence=IEA]
[GO:0033209 "tumor necrosis factor-mediated signaling pathway"
evidence=IEA] [GO:0032648 "regulation of interferon-beta
production" evidence=IEA] [GO:0032088 "negative regulation of
NF-kappaB transcription factor activity" evidence=IEA] [GO:0031996
"thioesterase binding" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] [GO:0030162 "regulation of
proteolysis" evidence=IEA] [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0009898 "internal side of plasma membrane"
evidence=IEA] [GO:0002224 "toll-like receptor signaling pathway"
evidence=IEA] [GO:0045087 "innate immune response" evidence=IEA]
[GO:0042981 "regulation of apoptotic process" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008063 "Toll
signaling pathway" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR013323 InterPro:IPR027128
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144
PROSITE:PS50145 SMART:SM00061 SMART:SM00184 Prosite:PS00518
GO:GO:0042981 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0009898 InterPro:IPR017907
SUPFAM:SSF49599 GO:GO:0002224 GO:GO:0035631 GO:GO:0050688
Gene3D:3.90.890.10 GO:GO:0032648 GeneTree:ENSGT00550000074359
CTD:7187 KO:K03174 OMA:YGCTFQG PANTHER:PTHR10131:SF45
EMBL:DAAA02053290 IPI:IPI00716910 RefSeq:NP_001192515.1
UniGene:Bt.18290 Ensembl:ENSBTAT00000017918 GeneID:506182
KEGG:bta:506182 NextBio:20867485 Uniprot:E1BBH2
Length = 568
Score = 153 (58.9 bits), Expect = 4.9e-10, P = 4.9e-10
Identities = 43/125 (34%), Positives = 65/125 (52%)
Query: 9 YSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFVGRIRFTALN 65
YS FY+ FGY+ C RV ++ + +LSLF +++GE D +L WPF ++ ++
Sbjct: 441 YSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMD 500
Query: 66 T-SSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 124
SS + D + D N SFK+P +N A G F+ VL+ G ++DDT
Sbjct: 501 QGSSRRHLGDAFKPDPNSSSFKKPTGE-MNI-ASGCPVFV-AQTVLE--NGTYIKDDTIF 555
Query: 125 IKTQV 129
IK V
Sbjct: 556 IKVIV 560
>UNIPROTKB|E2RG86 [details] [associations]
symbol:TRAF3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050688 "regulation of defense response to
virus" evidence=IEA] [GO:0035631 "CD40 receptor complex"
evidence=IEA] [GO:0033209 "tumor necrosis factor-mediated signaling
pathway" evidence=IEA] [GO:0032648 "regulation of interferon-beta
production" evidence=IEA] [GO:0032088 "negative regulation of
NF-kappaB transcription factor activity" evidence=IEA] [GO:0031996
"thioesterase binding" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] [GO:0030162 "regulation of
proteolysis" evidence=IEA] [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0009898 "internal side of plasma membrane"
evidence=IEA] [GO:0002224 "toll-like receptor signaling pathway"
evidence=IEA] [GO:0045087 "innate immune response" evidence=IEA]
[GO:0042981 "regulation of apoptotic process" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008063 "Toll
signaling pathway" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR013323 InterPro:IPR027128
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144
PROSITE:PS50145 SMART:SM00061 SMART:SM00184 Prosite:PS00518
GO:GO:0042981 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0009898 InterPro:IPR017907
SUPFAM:SSF49599 GO:GO:0002224 GO:GO:0035631 GO:GO:0050688
Gene3D:3.90.890.10 GO:GO:0032648 GeneTree:ENSGT00550000074359
CTD:7187 KO:K03174 OMA:YGCTFQG PANTHER:PTHR10131:SF45
EMBL:AAEX03006032 RefSeq:XP_854615.1 ProteinModelPortal:E2RG86
Ensembl:ENSCAFT00000028719 GeneID:490867 KEGG:cfa:490867
NextBio:20863803 Uniprot:E2RG86
Length = 568
Score = 153 (58.9 bits), Expect = 4.9e-10, P = 4.9e-10
Identities = 43/125 (34%), Positives = 65/125 (52%)
Query: 9 YSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFVGRIRFTALN 65
YS FY+ FGY+ C RV ++ + +LSLF +++GE D +L WPF ++ ++
Sbjct: 441 YSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMD 500
Query: 66 T-SSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 124
SS + D + D N SFK+P +N A G F+ VL+ G ++DDT
Sbjct: 501 QGSSRRHLGDAFKPDPNSSSFKKPTGE-MNI-ASGCPVFV-AQTVLE--NGTYIKDDTIF 555
Query: 125 IKTQV 129
IK V
Sbjct: 556 IKVIV 560
>UNIPROTKB|Q13114 [details] [associations]
symbol:TRAF3 "TNF receptor-associated factor 3"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005768 "endosome" evidence=IEA]
[GO:0030162 "regulation of proteolysis" evidence=IMP] [GO:0033209
"tumor necrosis factor-mediated signaling pathway" evidence=IMP]
[GO:0032088 "negative regulation of NF-kappaB transcription factor
activity" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0001817 "regulation of cytokine production" evidence=ISS]
[GO:0032648 "regulation of interferon-beta production"
evidence=ISS] [GO:0050688 "regulation of defense response to virus"
evidence=ISS] [GO:0002224 "toll-like receptor signaling pathway"
evidence=ISS] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IPI] [GO:0031996 "thioesterase binding" evidence=IPI]
[GO:0004871 "signal transducer activity" evidence=TAS] [GO:0006917
"induction of apoptosis" evidence=TAS] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0008063 "Toll signaling pathway" evidence=TAS] [GO:0032480
"negative regulation of type I interferon production" evidence=TAS]
[GO:0034138 "toll-like receptor 3 signaling pathway" evidence=TAS]
[GO:0034142 "toll-like receptor 4 signaling pathway" evidence=TAS]
[GO:0035666 "TRIF-dependent toll-like receptor signaling pathway"
evidence=TAS] [GO:0045087 "innate immune response" evidence=TAS]
[GO:0009898 "internal side of plasma membrane" evidence=ISS]
[GO:0035631 "CD40 receptor complex" evidence=ISS]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR012227 InterPro:IPR013323
InterPro:IPR027128 Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
Prosite:PS00518 GO:GO:0005829 GO:GO:0005739 Reactome:REACT_6900
GO:GO:0006915 GO:GO:0006917 GO:GO:0046872 GO:GO:0005768
GO:GO:0008270 GO:GO:0030162 GO:GO:0045087 GO:GO:0004871
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0032088 GO:GO:0033209
GO:GO:0004842 EMBL:AL117209 GO:GO:0009898 InterPro:IPR017907
GO:GO:0008063 GO:GO:0034138 GO:GO:0034142 GO:GO:0035666
GO:GO:0032480 SUPFAM:SSF49599 GO:GO:0035631 CleanEx:HS_CAP1
GO:GO:0050688 Gene3D:3.90.890.10 GO:GO:0032648 PDB:1KZZ PDB:1L0A
PDBsum:1KZZ PDBsum:1L0A Orphanet:1930 PDB:1RF3 PDBsum:1RF3 PDB:1FLL
PDBsum:1FLL HOVERGEN:HBG058222 EMBL:U15637 EMBL:U19260 EMBL:L38509
EMBL:U21092 EMBL:BX247977 EMBL:AK303172 EMBL:BC075087 EMBL:BC075086
EMBL:AF110908 IPI:IPI00297473 IPI:IPI00973170 PIR:A55960 PIR:S68467
RefSeq:NP_001186356.1 RefSeq:NP_003291.2 RefSeq:NP_663777.1
RefSeq:NP_663778.1 UniGene:Hs.510528 PDB:1FLK PDB:1ZMS PDB:2ECY
PDB:2GKW PDBsum:1FLK PDBsum:1ZMS PDBsum:2ECY PDBsum:2GKW
ProteinModelPortal:Q13114 SMR:Q13114 DIP:DIP-6222N IntAct:Q13114
MINT:MINT-1144408 STRING:Q13114 PhosphoSite:Q13114 DMDM:116242824
PaxDb:Q13114 PRIDE:Q13114 Ensembl:ENST00000392745
Ensembl:ENST00000539721 Ensembl:ENST00000560371 GeneID:7187
KEGG:hsa:7187 UCSC:uc001ymc.2 UCSC:uc010txy.2 CTD:7187
GeneCards:GC14P103243 HGNC:HGNC:12033 HPA:HPA002933 MIM:601896
MIM:614849 neXtProt:NX_Q13114 PharmGKB:PA36710 eggNOG:NOG239194
InParanoid:Q13114 KO:K03174 OMA:YGCTFQG OrthoDB:EOG4JWVD7
PhylomeDB:Q13114 ChiTaRS:TRAF3 EvolutionaryTrace:Q13114
GenomeRNAi:7187 NextBio:28176 PMAP-CutDB:Q13114 ArrayExpress:Q13114
Bgee:Q13114 CleanEx:HS_TRAF3 Genevestigator:Q13114
GermOnline:ENSG00000131323 PANTHER:PTHR10131:SF45 Uniprot:Q13114
Length = 568
Score = 153 (58.9 bits), Expect = 4.9e-10, P = 4.9e-10
Identities = 43/125 (34%), Positives = 65/125 (52%)
Query: 9 YSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFVGRIRFTALN 65
YS FY+ FGY+ C RV ++ + +LSLF +++GE D +L WPF ++ ++
Sbjct: 441 YSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMD 500
Query: 66 T-SSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 124
SS + D + D N SFK+P +N A G F+ VL+ G ++DDT
Sbjct: 501 QGSSRRHLGDAFKPDPNSSSFKKPTGE-MNI-ASGCPVFV-AQTVLE--NGTYIKDDTIF 555
Query: 125 IKTQV 129
IK V
Sbjct: 556 IKVIV 560
>UNIPROTKB|F1SA11 [details] [associations]
symbol:LOC100156979 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0050688 "regulation of defense response to virus"
evidence=IEA] [GO:0035631 "CD40 receptor complex" evidence=IEA]
[GO:0033209 "tumor necrosis factor-mediated signaling pathway"
evidence=IEA] [GO:0032648 "regulation of interferon-beta
production" evidence=IEA] [GO:0032088 "negative regulation of
NF-kappaB transcription factor activity" evidence=IEA] [GO:0031996
"thioesterase binding" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] [GO:0030162 "regulation of
proteolysis" evidence=IEA] [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0009898 "internal side of plasma membrane"
evidence=IEA] [GO:0002224 "toll-like receptor signaling pathway"
evidence=IEA] [GO:0045087 "innate immune response" evidence=IEA]
[GO:0042981 "regulation of apoptotic process" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008063 "Toll
signaling pathway" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR013323 InterPro:IPR027128
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144
PROSITE:PS50145 SMART:SM00061 SMART:SM00184 Prosite:PS00518
GO:GO:0042981 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0009898 InterPro:IPR017907
SUPFAM:SSF49599 GO:GO:0002224 GO:GO:0035631 GO:GO:0050688
Gene3D:3.90.890.10 GO:GO:0032648 GeneTree:ENSGT00550000074359
OMA:YGCTFQG PANTHER:PTHR10131:SF45 EMBL:CT998550
Ensembl:ENSSSCT00000002804 Ensembl:ENSSSCT00000034942
Uniprot:F1SA11
Length = 568
Score = 153 (58.9 bits), Expect = 4.9e-10, P = 4.9e-10
Identities = 43/125 (34%), Positives = 65/125 (52%)
Query: 9 YSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFVGRIRFTALN 65
YS FY+ FGY+ C RV ++ + +LSLF +++GE D +L WPF ++ ++
Sbjct: 441 YSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMD 500
Query: 66 T-SSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 124
SS + D + D N SFK+P +N A G F+ VL+ G ++DDT
Sbjct: 501 QGSSRRHLGDAFKPDPNSSSFKKPTGE-MNI-ASGCPVFV-AQTVLE--NGTYIKDDTIF 555
Query: 125 IKTQV 129
IK V
Sbjct: 556 IKVIV 560
>MGI|MGI:101836 [details] [associations]
symbol:Traf1 "TNF receptor-associated factor 1" species:10090
"Mus musculus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=ISO]
[GO:0031996 "thioesterase binding" evidence=ISO] [GO:0042981
"regulation of apoptotic process" evidence=ISO] [GO:0051092
"positive regulation of NF-kappaB transcription factor activity"
evidence=ISO] InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR027136 Pfam:PF00917
PIRSF:PIRSF015614 PROSITE:PS50144 SMART:SM00061 MGI:MGI:101836
GO:GO:0005737 GO:GO:0006915 GO:GO:0007165 GO:GO:0042981
GO:GO:0008270 GO:GO:0051092 EMBL:CH466542 SUPFAM:SSF49599
EMBL:AL929068 CTD:7185 eggNOG:NOG264247 HOGENOM:HOG000231558
HOVERGEN:HBG058222 KO:K03172 OMA:RRCHESA OrthoDB:EOG42Z4Q6
PANTHER:PTHR10131:SF29 EMBL:L35302 EMBL:AK029135 EMBL:AK169515
EMBL:AK172598 IPI:IPI00135899 PIR:A54750 RefSeq:NP_033447.2
UniGene:Mm.239514 HSSP:Q12933 ProteinModelPortal:P39428 SMR:P39428
DIP:DIP-260N IntAct:P39428 STRING:P39428 PhosphoSite:P39428
PRIDE:P39428 Ensembl:ENSMUST00000028234 Ensembl:ENSMUST00000113064
Ensembl:ENSMUST00000172159 GeneID:22029 KEGG:mmu:22029
GeneTree:ENSGT00550000074359 InParanoid:Q8CE28 NextBio:301776
Bgee:P39428 CleanEx:MM_TRAF1 Genevestigator:P39428
GermOnline:ENSMUSG00000026875 Uniprot:P39428
Length = 409
Score = 150 (57.9 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 35/121 (28%), Positives = 66/121 (54%)
Query: 9 YSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWPFVGRIRFTALN 65
+S FY++ +GY+ C R+ ++ + + +LSLFI +++GE D +L WPF ++ F L+
Sbjct: 285 FSPAFYTAKYGYKLCLRLYLNGDGSGKKTHLSLFIVIMRGEYDALLPWPFRNKVTFMLLD 344
Query: 66 TSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVI 125
++ D + D + SF+RP + A G F ++ + P ++ +DDT +
Sbjct: 345 QNNREHAIDAFRPDLSSASFQRPQSE--TNVASGCPLFFPLSKLQSPKHAYV-KDDTMFL 401
Query: 126 K 126
K
Sbjct: 402 K 402
>UNIPROTKB|I3L7X2 [details] [associations]
symbol:TRAF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042981 "regulation of
apoptotic process" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR012227
InterPro:IPR013323 InterPro:IPR027130 Pfam:PF00917
PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144 PROSITE:PS50145
SMART:SM00061 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
GO:GO:0007165 GO:GO:0042981 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10
GeneTree:ENSGT00550000074359 CTD:7188 KO:K09849 OMA:IDKSAWL
PANTHER:PTHR10131:SF23 EMBL:AEMK01103347 EMBL:CU915362
EMBL:FP565698 RefSeq:XP_003482803.1 UniGene:Ssc.41249
Ensembl:ENSSSCT00000022338 GeneID:396616 KEGG:ssc:396616
Uniprot:I3L7X2
Length = 558
Score = 152 (58.6 bits), Expect = 6.1e-10, P = 6.1e-10
Identities = 40/125 (32%), Positives = 67/125 (53%)
Query: 9 YSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWPFVGRIRFTALN 65
+S FY+S GYR C R ++ + + +LSL+ +++GE D +L WPF R+ L+
Sbjct: 429 FSQPFYTSRCGYRLCARAYLNGDGSGKGTHLSLYFVVMRGEFDSLLQWPFRQRVTLMLLD 488
Query: 66 TSSEFS-ITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 124
S + + I + ++D N SFKRP + +N A G F+ L+ + ++DDT
Sbjct: 489 QSGKKNHIMETFKADPNSSSFKRP-DGEMNI-ASGCPRFV-AHSTLESAKNTYIKDDTLF 545
Query: 125 IKTQV 129
+K V
Sbjct: 546 LKVAV 550
>ZFIN|ZDB-GENE-071120-4 [details] [associations]
symbol:traf1 "TNF receptor-associated factor 1"
species:7955 "Danio rerio" [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0051092
"positive regulation of NF-kappaB transcription factor activity"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR012227 InterPro:IPR013323
InterPro:IPR027136 Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
Prosite:PS00518 ZFIN:ZDB-GENE-071120-4 GO:GO:0007165 GO:GO:0042981
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10
CTD:7185 eggNOG:NOG264247 HOGENOM:HOG000231558 HOVERGEN:HBG058222
KO:K03172 OrthoDB:EOG42Z4Q6 PANTHER:PTHR10131:SF29
GeneTree:ENSGT00550000074359 EMBL:CR376844 IPI:IPI00866427
RefSeq:NP_001121853.1 UniGene:Dr.134981 Ensembl:ENSDART00000101174
GeneID:100148503 KEGG:dre:100148503 OMA:DHLENGC NextBio:20792131
Uniprot:B0UXK1
Length = 551
Score = 151 (58.2 bits), Expect = 7.6e-10, P = 7.6e-10
Identities = 38/124 (30%), Positives = 66/124 (53%)
Query: 9 YSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWPFVGRIRFTALN 65
YS FY++ +G++ C R+ ++ + A ++SLF +++GE D IL WPF ++ F L+
Sbjct: 427 YSPAFYTARYGFKVCLRLYLNGDGAGKGSHISLFFVIMKGEYDPILSWPFKHKVTFFLLD 486
Query: 66 TSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVI 125
+ + D + D + SF +PV+ +N A G F + + P + +DDT I
Sbjct: 487 QNQREHVIDAFRPDLSSMSFHQPVSD-MNV-ASGCPLFFPLKKLRSPKHAYC-KDDTIYI 543
Query: 126 KTQV 129
K V
Sbjct: 544 KCVV 547
>UNIPROTKB|A7YWC7 [details] [associations]
symbol:TRAF5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051092 "positive regulation of NF-kappaB transcription
factor activity" evidence=IEA] [GO:0043123 "positive regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IEA] [GO:0031996
"thioesterase binding" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] [GO:0008284 "positive regulation of
cell proliferation" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR012227
InterPro:IPR013323 InterPro:IPR027130 Pfam:PF00917
PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144 PROSITE:PS50145
SMART:SM00061 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
GO:GO:0005813 GO:GO:0007165 GO:GO:0042981 GO:GO:0046872
GO:GO:0043123 GO:GO:0008270 GO:GO:0051092 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907 SUPFAM:SSF49599
Gene3D:3.90.890.10 HOVERGEN:HBG058222 GeneTree:ENSGT00550000074359
eggNOG:NOG239194 HOGENOM:HOG000231557 CTD:7188 KO:K09849
OMA:IDKSAWL OrthoDB:EOG4JWVD2 PANTHER:PTHR10131:SF23
EMBL:DAAA02043784 EMBL:DAAA02043785 EMBL:BC134494 IPI:IPI00685963
RefSeq:NP_001098810.1 UniGene:Bt.8981 SMR:A7YWC7 STRING:A7YWC7
Ensembl:ENSBTAT00000015940 GeneID:507234 KEGG:bta:507234
InParanoid:A7YWC7 NextBio:20867969 Uniprot:A7YWC7
Length = 558
Score = 151 (58.2 bits), Expect = 7.8e-10, P = 7.8e-10
Identities = 40/125 (32%), Positives = 67/125 (53%)
Query: 9 YSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWPFVGRIRFTALN 65
+S FY+S GYR C R ++ + + +LSL+ +++GE D +L WPF R+ L+
Sbjct: 429 FSQPFYTSRCGYRLCARAYLNGDGSGKGTHLSLYFVVMRGEFDSLLQWPFRQRVTLMLLD 488
Query: 66 TSSEFS-ITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 124
S + + I + ++D N SFKRP + +N A G F+ L+ + ++DDT
Sbjct: 489 QSGKKNHIMETFKADPNSSSFKRP-DGEMNI-ASGCPRFV-AHSTLENAKNTYIKDDTLF 545
Query: 125 IKTQV 129
+K V
Sbjct: 546 LKVAV 550
>MGI|MGI:107548 [details] [associations]
symbol:Traf5 "TNF receptor-associated factor 5" species:10090
"Mus musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005813 "centrosome"
evidence=ISO] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IMP] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IMP] [GO:0009898 "internal side of plasma
membrane" evidence=IDA] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=ISO] [GO:0031996 "thioesterase binding" evidence=ISO]
[GO:0035631 "CD40 receptor complex" evidence=IDA] [GO:0042981
"regulation of apoptotic process" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0051092 "positive regulation of NF-kappaB
transcription factor activity" evidence=ISO] InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR012227 InterPro:IPR013323
InterPro:IPR027130 Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
MGI:MGI:107548 Pfam:PF00097 Prosite:PS00518 GO:GO:0005737
GO:GO:0006915 GO:GO:0042981 GO:GO:0046872 GO:GO:0008284
GO:GO:0008270 GO:GO:0004871 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0009898 InterPro:IPR017907 SUPFAM:SSF49599
GO:GO:0035631 Gene3D:3.90.890.10 HOVERGEN:HBG058222
eggNOG:NOG239194 HOGENOM:HOG000231557 CTD:7188 KO:K09849
OrthoDB:EOG4JWVD2 PANTHER:PTHR10131:SF23 EMBL:D78141 EMBL:D83528
EMBL:BC012702 IPI:IPI00323891 RefSeq:NP_035763.1 UniGene:Mm.380491
UniGene:Mm.389227 PDB:4GJH PDBsum:4GJH ProteinModelPortal:P70191
SMR:P70191 IntAct:P70191 STRING:P70191 PhosphoSite:P70191
PRIDE:P70191 GeneID:22033 KEGG:mmu:22033 InParanoid:P70191
NextBio:301794 CleanEx:MM_TRAF5 Genevestigator:P70191
Uniprot:P70191
Length = 558
Score = 151 (58.2 bits), Expect = 7.8e-10, P = 7.8e-10
Identities = 40/125 (32%), Positives = 68/125 (54%)
Query: 9 YSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWPFVGRIRFTALN 65
+S FY+S GYR C R ++ + + +LSL+ +++GE D +L WPF R+ L+
Sbjct: 429 FSQPFYTSRCGYRLCARAYLNGDGSGKGTHLSLYFVVMRGEFDSLLQWPFRQRVTLMLLD 488
Query: 66 TSSEFS-ITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 124
S + + I + ++D N SFKRP + +N A G F+ + L+ + ++DDT
Sbjct: 489 QSGKKNHIVETFKADPNSSSFKRP-DGEMNI-ASGCPRFVSHS-TLENSKNTYIKDDTLF 545
Query: 125 IKTQV 129
+K V
Sbjct: 546 LKVAV 550
>UNIPROTKB|B1AMX9 [details] [associations]
symbol:TRAF2 "TNF receptor-associated factor 2"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0007250 "activation of
NF-kappaB-inducing kinase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0033209 "tumor necrosis
factor-mediated signaling pathway" evidence=IEA] [GO:0042981
"regulation of apoptotic process" evidence=IEA] [GO:0046328
"regulation of JNK cascade" evidence=IEA] [GO:0051865 "protein
autoubiquitination" evidence=IEA] InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR012227 InterPro:IPR027133
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144
PROSITE:PS50145 SMART:SM00061 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0007165 GO:GO:0042981 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AL355987
InterPro:IPR017907 SUPFAM:SSF49599 HOGENOM:HOG000231558
HOVERGEN:HBG058222 EMBL:AL449425 UniGene:Hs.522506 HGNC:HGNC:12032
PANTHER:PTHR10131:SF21 IPI:IPI00384922 SMR:B1AMX9
Ensembl:ENST00000371645 UCSC:uc010nbv.1 Uniprot:B1AMX9
Length = 422
Score = 149 (57.5 bits), Expect = 7.9e-10, P = 7.9e-10
Identities = 38/128 (29%), Positives = 67/128 (52%)
Query: 9 YSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWPFVGRIRFTALN 65
+S FY+S +GY+ C R+ ++ + +LSLF +++G ND +L WPF ++ L+
Sbjct: 298 FSPAFYTSRYGYKMCLRIYLNGDGTGRGTHLSLFFVVMKGPNDALLRWPFNQKVTLMLLD 357
Query: 66 TSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVI 125
++ + D + D SF+RPVN +N A G F V+ + + + DD I
Sbjct: 358 QNNREHVIDAFRPDVTSSSFQRPVND-MNI-ASGCPLFCPVSKM--EAKNSYVRDDAIFI 413
Query: 126 KTQVTEMT 133
K + ++T
Sbjct: 414 KA-IVDLT 420
>UNIPROTKB|E2QWC6 [details] [associations]
symbol:TRAF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051092 "positive regulation of NF-kappaB
transcription factor activity" evidence=IEA] [GO:0042981
"regulation of apoptotic process" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR027136 Pfam:PF00917 PROSITE:PS50144 SMART:SM00061
SUPFAM:SSF49599 OMA:RRCHESA PANTHER:PTHR10131:SF29
GeneTree:ENSGT00550000074359 EMBL:AAEX03008173 EMBL:AAEX03008174
EMBL:AAEX03008175 Ensembl:ENSCAFT00000035950 Uniprot:E2QWC6
Length = 414
Score = 148 (57.2 bits), Expect = 9.8e-10, P = 9.8e-10
Identities = 35/121 (28%), Positives = 65/121 (53%)
Query: 9 YSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWPFVGRIRFTALN 65
+S FY++ +GY+ C R+ ++ + +LSLFI +++GE D +L WPF ++ F L+
Sbjct: 290 FSPAFYTAKYGYKLCLRLYLNGDGTGKRTHLSLFIVIMRGEYDALLPWPFRNKVTFMLLD 349
Query: 66 TSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVI 125
++ D + D + SF+RP + A G F ++ + P ++ +DDT +
Sbjct: 350 QNNREHAIDAFRPDLSSASFQRPQSE--TNVASGCPLFFPLSRLQSPKHAYV-KDDTMFL 406
Query: 126 K 126
K
Sbjct: 407 K 407
>UNIPROTKB|Q12933 [details] [associations]
symbol:TRAF2 "TNF receptor-associated factor 2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0051023 "regulation of immunoglobulin secretion" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0032743 "positive
regulation of interleukin-2 production" evidence=IMP] [GO:0002726
"positive regulation of T cell cytokine production" evidence=IMP]
[GO:0007250 "activation of NF-kappaB-inducing kinase activity"
evidence=IMP] [GO:0050870 "positive regulation of T cell
activation" evidence=IC] [GO:0070534 "protein K63-linked
ubiquitination" evidence=IDA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IDA] [GO:0070207 "protein homotrimerization"
evidence=IPI] [GO:0043507 "positive regulation of JUN kinase
activity" evidence=IDA] [GO:0033209 "tumor necrosis factor-mediated
signaling pathway" evidence=IDA] [GO:0042981 "regulation of
apoptotic process" evidence=IDA] [GO:0046625 "sphingolipid binding"
evidence=IDA] [GO:0051865 "protein autoubiquitination"
evidence=IDA;TAS] [GO:2001238 "positive regulation of extrinsic
apoptotic signaling pathway" evidence=IMP] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IPI] [GO:0031996 "thioesterase
binding" evidence=IPI] [GO:0051092 "positive regulation of
NF-kappaB transcription factor activity" evidence=IMP;IDA]
[GO:0005164 "tumor necrosis factor receptor binding" evidence=IPI]
[GO:0090073 "positive regulation of protein homodimerization
activity" evidence=IMP] [GO:0004871 "signal transducer activity"
evidence=NAS] [GO:0006461 "protein complex assembly" evidence=TAS]
[GO:0007165 "signal transduction" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=TAS]
[GO:0045087 "innate immune response" evidence=TAS] [GO:0042802
"identical protein binding" evidence=IPI] [GO:0019899 "enzyme
binding" evidence=IPI] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0005174 "CD40 receptor binding" evidence=ISS]
[GO:0009898 "internal side of plasma membrane" evidence=ISS]
[GO:0043623 "cellular protein complex assembly" evidence=ISS]
[GO:0035631 "CD40 receptor complex" evidence=ISS] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_578 InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR012227 InterPro:IPR027133
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144
PROSITE:PS50145 SMART:SM00061 SMART:SM00184 UniPathway:UPA00143
Pfam:PF00097 Prosite:PS00518 GO:GO:0005829 GO:GO:0005938
Reactome:REACT_6900 GO:GO:0046872 GO:GO:0008270 EMBL:CH471090
Pathway_Interaction_DB:caspase_pathway GO:GO:0045087 GO:GO:0045121
GO:GO:0004871 GO:GO:0006919 GO:GO:0030163
Pathway_Interaction_DB:tnfpathway GO:GO:0051092 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:AL355987 GO:GO:0070207
Pathway_Interaction_DB:ceramidepathway GO:GO:0033209 GO:GO:0004842
GO:GO:0007250 Pathway_Interaction_DB:hivnefpathway GO:GO:0009898
InterPro:IPR017907 GO:GO:0070534 GO:GO:0051865 GO:GO:2001238
Pathway_Interaction_DB:trail_pathway GO:GO:0043623
Pathway_Interaction_DB:p38_mkk3_6pathway SUPFAM:SSF49599
GO:GO:0050870 GO:GO:0035631 PDB:3M0A PDB:3M0D PDBsum:3M0A
PDBsum:3M0D GO:GO:0032743 GO:GO:0005174 GO:GO:0051023 GO:GO:0090073
GO:GO:0043507 GO:GO:0034351 GO:GO:0046625 GO:GO:0002726
CleanEx:HS_TRAF2 PDB:1CA9 PDBsum:1CA9 PDB:1D0A PDBsum:1D0A PDB:1CZZ
PDB:1D00 PDBsum:1CZZ PDBsum:1D00 PDB:1D01 PDBsum:1D01 PDB:1D0J
PDBsum:1D0J PDB:1F3V PDBsum:1F3V eggNOG:NOG264247
HOGENOM:HOG000231558 HOVERGEN:HBG058222 EMBL:U12597 EMBL:AK054686
EMBL:AK289722 EMBL:AK298370 EMBL:BX538160 EMBL:AY623660
EMBL:AL449425 EMBL:BC032410 EMBL:BC033810 EMBL:BC043492
EMBL:BC064662 IPI:IPI00030278 IPI:IPI00292635 IPI:IPI00970911
IPI:IPI00970988 PIR:S56163 RefSeq:NP_066961.2 UniGene:Hs.522506
PDB:1CA4 PDB:1CZY PDB:1QSC PDB:3KNV PDB:3M06 PDBsum:1CA4
PDBsum:1CZY PDBsum:1QSC PDBsum:3KNV PDBsum:3M06
ProteinModelPortal:Q12933 SMR:Q12933 DIP:DIP-6223N IntAct:Q12933
MINT:MINT-107429 STRING:Q12933 PhosphoSite:Q12933 DMDM:23503103
PaxDb:Q12933 PRIDE:Q12933 DNASU:7186 Ensembl:ENST00000247668
Ensembl:ENST00000359662 Ensembl:ENST00000536468 GeneID:7186
KEGG:hsa:7186 UCSC:uc004cjv.3 UCSC:uc010nbw.3 UCSC:uc011mek.2
CTD:7186 GeneCards:GC09P139776 H-InvDB:HIX0169360 HGNC:HGNC:12032
HPA:CAB004603 HPA:HPA009972 HPA:HPA010634 MIM:601895
neXtProt:NX_Q12933 PharmGKB:PA164742666 InParanoid:Q12933 KO:K03173
OMA:PSDGCTW EvolutionaryTrace:Q12933 GenomeRNAi:7186 NextBio:28172
ArrayExpress:Q12933 Bgee:Q12933 Genevestigator:Q12933
GermOnline:ENSG00000127191 PANTHER:PTHR10131:SF21 Uniprot:Q12933
Length = 501
Score = 149 (57.5 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 38/128 (29%), Positives = 67/128 (52%)
Query: 9 YSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWPFVGRIRFTALN 65
+S FY+S +GY+ C R+ ++ + +LSLF +++G ND +L WPF ++ L+
Sbjct: 377 FSPAFYTSRYGYKMCLRIYLNGDGTGRGTHLSLFFVVMKGPNDALLRWPFNQKVTLMLLD 436
Query: 66 TSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVI 125
++ + D + D SF+RPVN +N A G F V+ + + + DD I
Sbjct: 437 QNNREHVIDAFRPDVTSSSFQRPVND-MNI-ASGCPLFCPVSKM--EAKNSYVRDDAIFI 492
Query: 126 KTQVTEMT 133
K + ++T
Sbjct: 493 KA-IVDLT 499
>UNIPROTKB|F1NMN9 [details] [associations]
symbol:TRAF3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008063 "Toll signaling pathway" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0042981
"regulation of apoptotic process" evidence=IEA] [GO:0045087 "innate
immune response" evidence=IEA] [GO:0002224 "toll-like receptor
signaling pathway" evidence=IEA] [GO:0009898 "internal side of
plasma membrane" evidence=IEA] [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0030162 "regulation of proteolysis" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0031996 "thioesterase binding" evidence=IEA] [GO:0032088
"negative regulation of NF-kappaB transcription factor activity"
evidence=IEA] [GO:0032648 "regulation of interferon-beta
production" evidence=IEA] [GO:0033209 "tumor necrosis
factor-mediated signaling pathway" evidence=IEA] [GO:0035631 "CD40
receptor complex" evidence=IEA] [GO:0050688 "regulation of defense
response to virus" evidence=IEA] InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR013323 InterPro:IPR027128
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144
PROSITE:PS50145 SMART:SM00061 SMART:SM00184 Prosite:PS00518
GO:GO:0042981 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0009898 InterPro:IPR017907
SUPFAM:SSF49599 GO:GO:0002224 GO:GO:0035631 GO:GO:0050688
Gene3D:3.90.890.10 GO:GO:0032648 GeneTree:ENSGT00550000074359
OMA:YGCTFQG PANTHER:PTHR10131:SF45 EMBL:AADN02003763
EMBL:AADN02003761 EMBL:AADN02003762 IPI:IPI00820500
Ensembl:ENSGALT00000037491 Uniprot:F1NMN9
Length = 549
Score = 149 (57.5 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 42/125 (33%), Positives = 64/125 (51%)
Query: 9 YSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFVGRIRFTALN 65
YS FY+ FGY+ C RV ++ + +LSLF +++GE D +L WPF ++ ++
Sbjct: 422 YSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMD 481
Query: 66 TS-SEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 124
S + D + D N SFK+P +N A G F+ VL+ G ++DDT
Sbjct: 482 QGPSRRHLGDAFKPDPNSSSFKKPTGE-MNI-ASGCPVFV-AQTVLE--NGTYIKDDTIF 536
Query: 125 IKTQV 129
IK V
Sbjct: 537 IKVIV 541
>UNIPROTKB|K7GRG1 [details] [associations]
symbol:TRAF2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051865 "protein autoubiquitination" evidence=IEA]
[GO:0046328 "regulation of JNK cascade" evidence=IEA] [GO:0042981
"regulation of apoptotic process" evidence=IEA] [GO:0033209 "tumor
necrosis factor-mediated signaling pathway" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0007250
"activation of NF-kappaB-inducing kinase activity" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001293 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR027133 Pfam:PF00917
PIRSF:PIRSF015614 PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061
SUPFAM:SSF49599 GeneTree:ENSGT00550000074359 PANTHER:PTHR10131:SF21
EMBL:FP236151 Ensembl:ENSSSCT00000034674 Uniprot:K7GRG1
Length = 392
Score = 146 (56.5 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 39/128 (30%), Positives = 66/128 (51%)
Query: 9 YSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWPFVGRIRFTALN 65
+S FY+S +GY+ C R ++ + +LSLF L++G ND +L WPF ++ L+
Sbjct: 268 FSPAFYTSRYGYKMCLRAYLNGDGTGRGTHLSLFFVLMKGPNDALLRWPFNQKVTLMLLD 327
Query: 66 TSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVI 125
++ + D + D + SF+RPV +N A G F V+ + R + DD I
Sbjct: 328 QNNREHVIDAFRPDVSSSSFQRPVGD-MNI-ASGCPLFCPVSRM--EARSSYVRDDAIFI 383
Query: 126 KTQVTEMT 133
K + ++T
Sbjct: 384 KA-IVDLT 390
>UNIPROTKB|E1BTY1 [details] [associations]
symbol:TRAF2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0033209
"tumor necrosis factor-mediated signaling pathway" evidence=IEA]
[GO:0051865 "protein autoubiquitination" evidence=IEA] [GO:0002726
"positive regulation of T cell cytokine production" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005164 "tumor necrosis factor receptor binding" evidence=IEA]
[GO:0005174 "CD40 receptor binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009898 "internal side of plasma
membrane" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031996 "thioesterase binding" evidence=IEA]
[GO:0032743 "positive regulation of interleukin-2 production"
evidence=IEA] [GO:0035631 "CD40 receptor complex" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0043507
"positive regulation of JUN kinase activity" evidence=IEA]
[GO:0043623 "cellular protein complex assembly" evidence=IEA]
[GO:0046625 "sphingolipid binding" evidence=IEA] [GO:0051023
"regulation of immunoglobulin secretion" evidence=IEA] [GO:0051091
"positive regulation of sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0070207 "protein
homotrimerization" evidence=IEA] [GO:0070534 "protein K63-linked
ubiquitination" evidence=IEA] [GO:0090073 "positive regulation of
protein homodimerization activity" evidence=IEA] [GO:2001238
"positive regulation of extrinsic apoptotic signaling pathway"
evidence=IEA] [GO:0002218 "activation of innate immune response"
evidence=TAS] [GO:0007250 "activation of NF-kappaB-inducing kinase
activity" evidence=TAS] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR027133 Pfam:PF00917
PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144 PROSITE:PS50145
SMART:SM00061 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
GO:GO:0005737 GO:GO:0051091 GO:GO:0046872 GO:GO:0008270
GO:GO:0030163 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0070207
GO:GO:0002218 GO:GO:0004842 GO:GO:0007250 GO:GO:0009898
InterPro:IPR017907 GO:GO:0070534 GO:GO:2001238 GO:GO:0043623
SUPFAM:SSF49599 GO:GO:0035631 GO:GO:0032743 GO:GO:0051023
GO:GO:0090073 GO:GO:0043507 Reactome:REACT_147795 GO:GO:0046625
GO:GO:0002726 GeneTree:ENSGT00550000074359 OMA:PSDGCTW
PANTHER:PTHR10131:SF21 EMBL:AADN02026991 IPI:IPI00600516
ProteinModelPortal:E1BTY1 Ensembl:ENSGALT00000014665 Uniprot:E1BTY1
Length = 527
Score = 147 (56.8 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 37/119 (31%), Positives = 64/119 (53%)
Query: 9 YSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWPFVGRIRFTALN 65
+S FY+S +GY+ C RV ++ + +LSLF +++G ND +L WPF ++ L+
Sbjct: 403 FSPAFYTSKYGYKMCLRVYLNGDGTGRGTHLSLFFVVMKGPNDALLRWPFNQKVTLMLLD 462
Query: 66 TSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 124
++ I D + D SF+RPV +N A G F V+ V++ ++ +D F+
Sbjct: 463 QNNREHIIDAFRPDVTSSSFQRPVTE-MNI-ASGCPLFCPVS-VMEAKNSYVRDDAIFI 518
>MGI|MGI:101835 [details] [associations]
symbol:Traf2 "TNF receptor-associated factor 2" species:10090
"Mus musculus" [GO:0002726 "positive regulation of T cell cytokine
production" evidence=ISO] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISO] [GO:0005102 "receptor binding"
evidence=ISO] [GO:0005164 "tumor necrosis factor receptor binding"
evidence=ISO] [GO:0005174 "CD40 receptor binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005938 "cell cortex" evidence=ISO] [GO:0006461
"protein complex assembly" evidence=ISO] [GO:0006915 "apoptotic
process" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IDA] [GO:0007250 "activation of NF-kappaB-inducing kinase
activity" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008289 "lipid binding" evidence=IEA] [GO:0009898
"internal side of plasma membrane" evidence=IDA] [GO:0016874
"ligase activity" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=ISO] [GO:0030163 "protein catabolic process" evidence=IMP]
[GO:0031435 "mitogen-activated protein kinase kinase kinase
binding" evidence=ISO] [GO:0031625 "ubiquitin protein ligase
binding" evidence=ISO] [GO:0031996 "thioesterase binding"
evidence=ISO] [GO:0032403 "protein complex binding" evidence=ISO]
[GO:0032743 "positive regulation of interleukin-2 production"
evidence=ISO] [GO:0033209 "tumor necrosis factor-mediated signaling
pathway" evidence=ISO] [GO:0034351 "negative regulation of glial
cell apoptotic process" evidence=ISO] [GO:0035631 "CD40 receptor
complex" evidence=IDA] [GO:0042802 "identical protein binding"
evidence=ISO] [GO:0042981 "regulation of apoptotic process"
evidence=ISO] [GO:0043066 "negative regulation of apoptotic
process" evidence=NAS] [GO:0043234 "protein complex" evidence=ISO]
[GO:0043507 "positive regulation of JUN kinase activity"
evidence=ISO] [GO:0043623 "cellular protein complex assembly"
evidence=IDA] [GO:0045121 "membrane raft" evidence=ISO] [GO:0046328
"regulation of JNK cascade" evidence=IDA] [GO:0046625 "sphingolipid
binding" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051023 "regulation of immunoglobulin secretion"
evidence=IMP] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=ISO]
[GO:0051092 "positive regulation of NF-kappaB transcription factor
activity" evidence=ISO] [GO:0051291 "protein heterooligomerization"
evidence=ISO] [GO:0051865 "protein autoubiquitination"
evidence=ISO] [GO:0070207 "protein homotrimerization" evidence=ISO]
[GO:0070534 "protein K63-linked ubiquitination" evidence=ISO]
[GO:0090073 "positive regulation of protein homodimerization
activity" evidence=ISO] [GO:2001238 "positive regulation of
extrinsic apoptotic signaling pathway" evidence=ISO]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR012227
InterPro:IPR027133 Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
UniPathway:UPA00143 MGI:MGI:101835 Pfam:PF00097 Prosite:PS00518
GO:GO:0005938 GO:GO:0006915 GO:GO:0043066 GO:GO:0046872
GO:GO:0008270 GO:GO:0045121 GO:GO:0030163 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AL732590 GO:GO:0070207
GO:GO:0033209 GO:GO:0004842 GO:GO:0007250 GO:GO:0009898
InterPro:IPR017907 GO:GO:0070534 GO:GO:0051865 GO:GO:2001238
GO:GO:0043623 SUPFAM:SSF49599 GO:GO:0035631 GO:GO:0032743
GO:GO:0051023 GO:GO:0090073 GO:GO:0043507 GO:GO:0034351
GO:GO:0046625 GO:GO:0002726 eggNOG:NOG264247 HOGENOM:HOG000231558
HOVERGEN:HBG058222 GeneTree:ENSGT00550000074359 CTD:7186 KO:K03173
OMA:PSDGCTW PANTHER:PTHR10131:SF21 EMBL:L35303 EMBL:AF027570
EMBL:AF233332 EMBL:AF233326 EMBL:AF233327 EMBL:AF233328
EMBL:AF233329 EMBL:AF233330 EMBL:AF233331 EMBL:BC003801
IPI:IPI00135901 IPI:IPI00271450 PIR:I61512 RefSeq:NP_033448.2
UniGene:Mm.3399 ProteinModelPortal:P39429 SMR:P39429 DIP:DIP-468N
IntAct:P39429 MINT:MINT-197749 STRING:P39429 PhosphoSite:P39429
PaxDb:P39429 PRIDE:P39429 Ensembl:ENSMUST00000028311
Ensembl:ENSMUST00000114234 GeneID:22030 KEGG:mmu:22030
UCSC:uc008isl.1 InParanoid:A2AJA3 OrthoDB:EOG4R502J NextBio:301780
Bgee:P39429 CleanEx:MM_TRAF2 Genevestigator:P39429
GermOnline:ENSMUSG00000026942 Uniprot:P39429
Length = 501
Score = 146 (56.5 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 38/128 (29%), Positives = 67/128 (52%)
Query: 9 YSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWPFVGRIRFTALN 65
+S FY+S +GY+ C RV ++ + +LSLF +++G ND +L WPF ++ L+
Sbjct: 377 FSPAFYTSRYGYKMCLRVYLNGDGTGRGTHLSLFFVVMKGPNDALLQWPFNQKVTLMLLD 436
Query: 66 TSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVI 125
++ + D + D SF+RPV+ +N A G F V+ + + + DD I
Sbjct: 437 HNNREHVIDAFRPDVTSSSFQRPVSD-MNI-ASGCPLFCPVSKM--EAKNSYVRDDAIFI 492
Query: 126 KTQVTEMT 133
K + ++T
Sbjct: 493 KA-IVDLT 499
>UNIPROTKB|F1RVZ4 [details] [associations]
symbol:TRAF2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2001238 "positive regulation of extrinsic apoptotic
signaling pathway" evidence=IEA] [GO:0090073 "positive regulation
of protein homodimerization activity" evidence=IEA] [GO:0070534
"protein K63-linked ubiquitination" evidence=IEA] [GO:0070207
"protein homotrimerization" evidence=IEA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0051023 "regulation of immunoglobulin
secretion" evidence=IEA] [GO:0046625 "sphingolipid binding"
evidence=IEA] [GO:0043623 "cellular protein complex assembly"
evidence=IEA] [GO:0043507 "positive regulation of JUN kinase
activity" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=IEA] [GO:0035631 "CD40 receptor complex" evidence=IEA]
[GO:0032743 "positive regulation of interleukin-2 production"
evidence=IEA] [GO:0031996 "thioesterase binding" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0009898
"internal side of plasma membrane" evidence=IEA] [GO:0007250
"activation of NF-kappaB-inducing kinase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005174 "CD40 receptor
binding" evidence=IEA] [GO:0005164 "tumor necrosis factor receptor
binding" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0002726 "positive regulation of T cell
cytokine production" evidence=IEA] [GO:0051865 "protein
autoubiquitination" evidence=IEA] [GO:0033209 "tumor necrosis
factor-mediated signaling pathway" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR027133 Pfam:PF00917
PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144 PROSITE:PS50145
SMART:SM00061 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
GO:GO:0005737 GO:GO:0051091 GO:GO:0046872 GO:GO:0008270
GO:GO:0030163 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0070207
GO:GO:0004842 GO:GO:0007250 GO:GO:0009898 InterPro:IPR017907
GO:GO:0070534 GO:GO:2001238 GO:GO:0043623 SUPFAM:SSF49599
GO:GO:0035631 GO:GO:0032743 GO:GO:0051023 GO:GO:0090073
GO:GO:0043507 GO:GO:0046625 GO:GO:0002726
GeneTree:ENSGT00550000074359 OMA:PSDGCTW PANTHER:PTHR10131:SF21
EMBL:FP236151 ProteinModelPortal:F1RVZ4 Ensembl:ENSSSCT00000006417
Uniprot:F1RVZ4
Length = 533
Score = 146 (56.5 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 39/128 (30%), Positives = 66/128 (51%)
Query: 9 YSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWPFVGRIRFTALN 65
+S FY+S +GY+ C R ++ + +LSLF L++G ND +L WPF ++ L+
Sbjct: 409 FSPAFYTSRYGYKMCLRAYLNGDGTGRGTHLSLFFVLMKGPNDALLRWPFNQKVTLMLLD 468
Query: 66 TSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVI 125
++ + D + D + SF+RPV +N A G F V+ + R + DD I
Sbjct: 469 QNNREHVIDAFRPDVSSSSFQRPVGD-MNI-ASGCPLFCPVSRM--EARSSYVRDDAIFI 524
Query: 126 KTQVTEMT 133
K + ++T
Sbjct: 525 KA-IVDLT 531
>UNIPROTKB|E2RR95 [details] [associations]
symbol:TRAF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042981 "regulation of
apoptotic process" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR012227
InterPro:IPR013323 InterPro:IPR027130 Pfam:PF00917
PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144 PROSITE:PS50145
SMART:SM00061 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
GO:GO:0007165 GO:GO:0042981 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10
GeneTree:ENSGT00550000074359 PANTHER:PTHR10131:SF23
EMBL:AAEX03005087 EMBL:AAEX03005088 Ensembl:ENSCAFT00000019248
Uniprot:E2RR95
Length = 557
Score = 145 (56.1 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 39/125 (31%), Positives = 67/125 (53%)
Query: 9 YSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWPFVGRIRFTALN 65
+S FY+S GYR C R ++ + + +LSL+ +++GE D +L WPF R+ L+
Sbjct: 428 FSQPFYTSRCGYRLCARAYLNGDGSGKGTHLSLYFVVMRGEFDSLLQWPFRQRVTLMLLD 487
Query: 66 TSSEFS-ITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 124
S + + I + ++D + SFKRP + +N A G F+ L+ + ++DDT
Sbjct: 488 QSGKKNHIMETFKADPSSSSFKRP-DGEMNI-ASGCPRFV-AHSTLENAKNTYIKDDTVF 544
Query: 125 IKTQV 129
+K V
Sbjct: 545 LKVAV 549
>UNIPROTKB|J9P706 [details] [associations]
symbol:TRAF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042981 "regulation of
apoptotic process" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR012227
InterPro:IPR013323 InterPro:IPR027130 Pfam:PF00917
PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144 PROSITE:PS50145
SMART:SM00061 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
GO:GO:0007165 GO:GO:0042981 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10
GeneTree:ENSGT00550000074359 OMA:IDKSAWL PANTHER:PTHR10131:SF23
EMBL:AAEX03005087 EMBL:AAEX03005088 Ensembl:ENSCAFT00000043751
Uniprot:J9P706
Length = 559
Score = 145 (56.1 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 39/125 (31%), Positives = 67/125 (53%)
Query: 9 YSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWPFVGRIRFTALN 65
+S FY+S GYR C R ++ + + +LSL+ +++GE D +L WPF R+ L+
Sbjct: 430 FSQPFYTSRCGYRLCARAYLNGDGSGKGTHLSLYFVVMRGEFDSLLQWPFRQRVTLMLLD 489
Query: 66 TSSEFS-ITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 124
S + + I + ++D + SFKRP + +N A G F+ L+ + ++DDT
Sbjct: 490 QSGKKNHIMETFKADPSSSSFKRP-DGEMNI-ASGCPRFV-AHSTLENAKNTYIKDDTVF 546
Query: 125 IKTQV 129
+K V
Sbjct: 547 LKVAV 551
>UNIPROTKB|F6XG92 [details] [associations]
symbol:TRAF2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0046328 "regulation of JNK cascade" evidence=IEA]
[GO:0042981 "regulation of apoptotic process" evidence=IEA]
[GO:0033209 "tumor necrosis factor-mediated signaling pathway"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0007250 "activation of NF-kappaB-inducing kinase activity"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR027133 Pfam:PF00917
PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144 PROSITE:PS50145
SMART:SM00061 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
GO:GO:0007165 GO:GO:0042981 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
SUPFAM:SSF49599 GeneTree:ENSGT00550000074359 PANTHER:PTHR10131:SF21
EMBL:AAEX03006742 Ensembl:ENSCAFT00000031062 Uniprot:F6XG92
Length = 499
Score = 144 (55.7 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 37/128 (28%), Positives = 67/128 (52%)
Query: 9 YSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWPFVGRIRFTALN 65
+S FY+S +GY+ C R+ ++ + +LSLF +++G ND +L WPF ++ L+
Sbjct: 376 FSPAFYTSRYGYKMCLRIYLNGDGTGRGTHLSLFFVVMKGPNDALLRWPFNQKVTLMLLD 435
Query: 66 TSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVI 125
++ + D + D SF+RPV+ +N A G F V+ + + + DD I
Sbjct: 436 QNNREHVIDAFRPDVTSSSFQRPVSD-MNI-ASGCPLFCPVSKM--EAKNSYVRDDAIFI 491
Query: 126 KTQVTEMT 133
K + ++T
Sbjct: 492 KA-IVDLT 498
>UNIPROTKB|F1PY23 [details] [associations]
symbol:TRAF2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0046328 "regulation of JNK cascade" evidence=IEA]
[GO:0042981 "regulation of apoptotic process" evidence=IEA]
[GO:0033209 "tumor necrosis factor-mediated signaling pathway"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0007250 "activation of NF-kappaB-inducing kinase activity"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR027133 Pfam:PF00917
PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144 PROSITE:PS50145
SMART:SM00061 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
GO:GO:0007165 GO:GO:0042981 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
SUPFAM:SSF49599 GeneTree:ENSGT00550000074359 CTD:7186 KO:K03173
PANTHER:PTHR10131:SF21 EMBL:AAEX03006742 RefSeq:XP_857289.1
Ensembl:ENSCAFT00000031061 GeneID:480673 KEGG:cfa:480673
Uniprot:F1PY23
Length = 501
Score = 144 (55.7 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 37/128 (28%), Positives = 67/128 (52%)
Query: 9 YSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWPFVGRIRFTALN 65
+S FY+S +GY+ C R+ ++ + +LSLF +++G ND +L WPF ++ L+
Sbjct: 377 FSPAFYTSRYGYKMCLRIYLNGDGTGRGTHLSLFFVVMKGPNDALLRWPFNQKVTLMLLD 436
Query: 66 TSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVI 125
++ + D + D SF+RPV+ +N A G F V+ + + + DD I
Sbjct: 437 QNNREHVIDAFRPDVTSSSFQRPVSD-MNI-ASGCPLFCPVSKM--EAKNSYVRDDAIFI 492
Query: 126 KTQVTEMT 133
K + ++T
Sbjct: 493 KA-IVDLT 499
>UNIPROTKB|E2R6C7 [details] [associations]
symbol:TRAF2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0046328 "regulation of JNK cascade" evidence=IEA]
[GO:0042981 "regulation of apoptotic process" evidence=IEA]
[GO:0033209 "tumor necrosis factor-mediated signaling pathway"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0007250 "activation of NF-kappaB-inducing kinase activity"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR027133 Pfam:PF00917
PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144 PROSITE:PS50145
SMART:SM00061 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
GO:GO:0007165 GO:GO:0042981 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
SUPFAM:SSF49599 PANTHER:PTHR10131:SF21 Ensembl:ENSCAFT00000031062
Uniprot:E2R6C7
Length = 502
Score = 144 (55.7 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 37/128 (28%), Positives = 67/128 (52%)
Query: 9 YSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWPFVGRIRFTALN 65
+S FY+S +GY+ C R+ ++ + +LSLF +++G ND +L WPF ++ L+
Sbjct: 378 FSPAFYTSRYGYKMCLRIYLNGDGTGRGTHLSLFFVVMKGPNDALLRWPFNQKVTLMLLD 437
Query: 66 TSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVI 125
++ + D + D SF+RPV+ +N A G F V+ + + + DD I
Sbjct: 438 QNNREHVIDAFRPDVTSSSFQRPVSD-MNI-ASGCPLFCPVSKM--EAKNSYVRDDAIFI 493
Query: 126 KTQVTEMT 133
K + ++T
Sbjct: 494 KA-IVDLT 500
>UNIPROTKB|J9NS71 [details] [associations]
symbol:TRAF2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0046328 "regulation of JNK cascade" evidence=IEA]
[GO:0042981 "regulation of apoptotic process" evidence=IEA]
[GO:0033209 "tumor necrosis factor-mediated signaling pathway"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0007250 "activation of NF-kappaB-inducing kinase activity"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR027133 Pfam:PF00917
PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144 PROSITE:PS50145
SMART:SM00061 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
GO:GO:0007165 GO:GO:0042981 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
SUPFAM:SSF49599 GeneTree:ENSGT00550000074359 OMA:PSDGCTW
PANTHER:PTHR10131:SF21 EMBL:AAEX03006742 Ensembl:ENSCAFT00000049927
Uniprot:J9NS71
Length = 523
Score = 144 (55.7 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 37/128 (28%), Positives = 67/128 (52%)
Query: 9 YSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWPFVGRIRFTALN 65
+S FY+S +GY+ C R+ ++ + +LSLF +++G ND +L WPF ++ L+
Sbjct: 399 FSPAFYTSRYGYKMCLRIYLNGDGTGRGTHLSLFFVVMKGPNDALLRWPFNQKVTLMLLD 458
Query: 66 TSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVI 125
++ + D + D SF+RPV+ +N A G F V+ + + + DD I
Sbjct: 459 QNNREHVIDAFRPDVTSSSFQRPVSD-MNI-ASGCPLFCPVSKM--EAKNSYVRDDAIFI 514
Query: 126 KTQVTEMT 133
K + ++T
Sbjct: 515 KA-IVDLT 521
>UNIPROTKB|Q805B1 [details] [associations]
symbol:TRAF-5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0042981 "regulation of apoptotic process" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0031996 "thioesterase binding"
evidence=IEA] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=IEA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR013323 InterPro:IPR027130
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144
PROSITE:PS50145 SMART:SM00061 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0005813 GO:GO:0007165 GO:GO:0042981
GO:GO:0046872 GO:GO:0043123 GO:GO:0008270 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10
HOVERGEN:HBG058222 GeneTree:ENSGT00550000074359 eggNOG:NOG239194
HOGENOM:HOG000231557 CTD:7188 KO:K09849 OMA:IDKSAWL
OrthoDB:EOG4JWVD2 PANTHER:PTHR10131:SF23 HSSP:Q13114
EMBL:AADN02012068 EMBL:AB100868 EMBL:AJ720372 IPI:IPI00579684
RefSeq:NP_989550.1 UniGene:Gga.5127 SMR:Q805B1 STRING:Q805B1
Ensembl:ENSGALT00000016038 GeneID:374055 KEGG:gga:374055
InParanoid:Q805B1 NextBio:20813577 Uniprot:Q805B1
Length = 557
Score = 144 (55.7 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 40/129 (31%), Positives = 69/129 (53%)
Query: 9 YSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWPFVGRIRFTALN 65
+S FY+S GYR C R ++ + + ++SL+ +++GE D +L WPF ++ L+
Sbjct: 428 FSQPFYTSRCGYRLCARAYLNGDGSGKGTHVSLYFVVMRGEFDSLLPWPFKQKVTLMLLD 487
Query: 66 -TSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 124
T + I + ++D N SFKRP + +N A G F+ VL+ + + DDT
Sbjct: 488 QTGKKNHIVEVFRADPNSSSFKRP-DGEMNI-ASGCPRFVPHT-VLENTKNTYVRDDTLF 544
Query: 125 IKTQVTEMT 133
+K V ++T
Sbjct: 545 LKV-VVDLT 552
>ZFIN|ZDB-GENE-040801-257 [details] [associations]
symbol:traf3 "TNF receptor-associated factor 3"
species:7955 "Danio rerio" [GO:0001817 "regulation of cytokine
production" evidence=IEA] [GO:0033209 "tumor necrosis
factor-mediated signaling pathway" evidence=IEA] [GO:0050688
"regulation of defense response to virus" evidence=IEA] [GO:0008063
"Toll signaling pathway" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0032088 "negative regulation of NF-kappaB
transcription factor activity" evidence=IEA] [GO:0045087 "innate
immune response" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR012227
InterPro:IPR013323 InterPro:IPR027128 Pfam:PF00917
PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144 PROSITE:PS50145
SMART:SM00061 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
ZFIN:ZDB-GENE-040801-257 GO:GO:0007165 GO:GO:0042981 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10
HOVERGEN:HBG058222 GeneTree:ENSGT00550000074359 CTD:7187
eggNOG:NOG239194 KO:K03174 OMA:YGCTFQG OrthoDB:EOG4JWVD7
PANTHER:PTHR10131:SF45 HOGENOM:HOG000231557 EMBL:BX511189
EMBL:CR392327 EMBL:BC077157 IPI:IPI00499408 RefSeq:NP_001003513.1
UniGene:Dr.81587 SMR:Q6DEG0 STRING:Q6DEG0
Ensembl:ENSDART00000031458 Ensembl:ENSDART00000123200 GeneID:445119
KEGG:dre:445119 InParanoid:Q6DEG0 NextBio:20831882 Uniprot:Q6DEG0
Length = 573
Score = 143 (55.4 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 40/125 (32%), Positives = 64/125 (51%)
Query: 9 YSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFVGRIRFTALN 65
YS FY+ FGY+ C RV ++ + +LSLF +++GE D +L WPF ++ ++
Sbjct: 446 YSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVVMRGEYDALLQWPFKQKVTLMLMD 505
Query: 66 TS-SEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 124
+ + D + D + SF+RP +N A G F+ VL+ G ++DDT
Sbjct: 506 QGPARKHLGDAFKPDPSSSSFRRPTGE-MNI-ASGCPLFV-AQTVLE--NGTYIKDDTIF 560
Query: 125 IKTQV 129
IK V
Sbjct: 561 IKVTV 565
>UNIPROTKB|F1SME2 [details] [associations]
symbol:F1SME2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051092 "positive regulation of NF-kappaB transcription
factor activity" evidence=IEA] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR027136 Pfam:PF00917 PROSITE:PS50144 SMART:SM00061
SUPFAM:SSF49599 PANTHER:PTHR10131:SF29 GeneTree:ENSGT00550000074359
EMBL:CU571013 EMBL:AEMK01083462 EMBL:CU466455
Ensembl:ENSSSCT00000006061 OMA:KRCHESA Uniprot:F1SME2
Length = 403
Score = 140 (54.3 bits), Expect = 6.9e-09, P = 6.9e-09
Identities = 34/121 (28%), Positives = 62/121 (51%)
Query: 9 YSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWPFVGRIRFTALN 65
+ FY++ +GY+ C R+ ++ + +LSLFI +++GE D +L WPF ++ F L+
Sbjct: 279 WDGTFYTAKYGYKLCLRLYLNGDGTGKKTHLSLFIVIMRGEYDALLPWPFRNKVTFMLLD 338
Query: 66 TSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVI 125
++ D + D SF+RP + A G F + + P ++ +DDT +
Sbjct: 339 QNNREHAIDAFRPDLTSASFQRPQSE--TNVASGCPLFFPLNKLQSPKHAYV-KDDTMFL 395
Query: 126 K 126
K
Sbjct: 396 K 396
>UNIPROTKB|I3LS75 [details] [associations]
symbol:I3LS75 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051092 "positive regulation of NF-kappaB transcription
factor activity" evidence=IEA] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR027136 Pfam:PF00917 PROSITE:PS50144 SMART:SM00061
SUPFAM:SSF49599 PANTHER:PTHR10131:SF29 GeneTree:ENSGT00550000074359
EMBL:CU571013 EMBL:AEMK01083462 EMBL:CU466455
Ensembl:ENSSSCT00000023007 Uniprot:I3LS75
Length = 413
Score = 139 (54.0 bits), Expect = 9.2e-09, P = 9.2e-09
Identities = 34/117 (29%), Positives = 61/117 (52%)
Query: 13 FYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSE 69
FY++ +GY+ C R+ ++ + +LSLFI +++GE D +L WPF ++ F L+ ++
Sbjct: 293 FYTAKYGYKLCLRLYLNGDGTGKKTHLSLFIVIMRGEYDALLPWPFRNKVTFMLLDQNNR 352
Query: 70 FSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIK 126
D + D SF+RP + A G F + + P ++ +DDT +K
Sbjct: 353 EHAIDAFRPDLTSASFQRPQSE--TNVASGCPLFFPLNKLQSPKHAYV-KDDTMFLK 406
>UNIPROTKB|E1B9D9 [details] [associations]
symbol:TRAF2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2001238 "positive regulation of extrinsic apoptotic
signaling pathway" evidence=IEA] [GO:0090073 "positive regulation
of protein homodimerization activity" evidence=IEA] [GO:0070534
"protein K63-linked ubiquitination" evidence=IEA] [GO:0070207
"protein homotrimerization" evidence=IEA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0051023 "regulation of immunoglobulin
secretion" evidence=IEA] [GO:0046625 "sphingolipid binding"
evidence=IEA] [GO:0043623 "cellular protein complex assembly"
evidence=IEA] [GO:0043507 "positive regulation of JUN kinase
activity" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=IEA] [GO:0035631 "CD40 receptor complex" evidence=IEA]
[GO:0032743 "positive regulation of interleukin-2 production"
evidence=IEA] [GO:0031996 "thioesterase binding" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0009898
"internal side of plasma membrane" evidence=IEA] [GO:0007250
"activation of NF-kappaB-inducing kinase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005174 "CD40 receptor
binding" evidence=IEA] [GO:0005164 "tumor necrosis factor receptor
binding" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0002726 "positive regulation of T cell
cytokine production" evidence=IEA] [GO:0051865 "protein
autoubiquitination" evidence=IEA] [GO:0033209 "tumor necrosis
factor-mediated signaling pathway" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR027133 Pfam:PF00917
PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144 PROSITE:PS50145
SMART:SM00061 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
GO:GO:0005737 GO:GO:0051091 GO:GO:0046872 GO:GO:0008270
GO:GO:0030163 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0070207
GO:GO:0004842 GO:GO:0007250 GO:GO:0009898 InterPro:IPR017907
GO:GO:0070534 GO:GO:2001238 GO:GO:0043623 SUPFAM:SSF49599
GO:GO:0035631 GO:GO:0032743 GO:GO:0051023 GO:GO:0090073
GO:GO:0043507 GO:GO:0046625 GO:GO:0002726
GeneTree:ENSGT00550000074359 OMA:PSDGCTW PANTHER:PTHR10131:SF21
EMBL:DAAA02032446 IPI:IPI00701156 ProteinModelPortal:E1B9D9
Ensembl:ENSBTAT00000013869 Uniprot:E1B9D9
Length = 525
Score = 138 (53.6 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 37/128 (28%), Positives = 65/128 (50%)
Query: 9 YSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWPFVGRIRFTALN 65
+S FY+S +GY+ C R ++ + +LSLF L++G +D +L WPF ++ L+
Sbjct: 401 FSPAFYTSRYGYKMCLRAYLNGDGTGRGTHLSLFFVLMRGPHDALLRWPFNQKVTLMLLD 460
Query: 66 TSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVI 125
++ + D + D SF+RPV +N A G F V+ + + + DD I
Sbjct: 461 QNNREHVIDAFRPDVTSSSFQRPVGD-MNI-ASGCPLFCPVSKM--EAKNSYVRDDAIFI 516
Query: 126 KTQVTEMT 133
K + ++T
Sbjct: 517 KA-IVDLT 523
>UNIPROTKB|E2RDE8 [details] [associations]
symbol:TRAF6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070498 "interleukin-1-mediated signaling
pathway" evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0050852 "T cell receptor signaling pathway"
evidence=IEA] [GO:0048468 "cell development" evidence=IEA]
[GO:0046849 "bone remodeling" evidence=IEA] [GO:0045672 "positive
regulation of osteoclast differentiation" evidence=IEA] [GO:0043507
"positive regulation of JUN kinase activity" evidence=IEA]
[GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB
cascade" evidence=IEA] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0031666 "positive regulation of
lipopolysaccharide-mediated signaling pathway" evidence=IEA]
[GO:0009887 "organ morphogenesis" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0007250 "activation of
NF-kappaB-inducing kinase activity" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0001503
"ossification" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR027139 Pfam:PF00917
PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144 PROSITE:PS50145
SMART:SM00061 SMART:SM00184 Prosite:PS00518 GO:GO:0007165
GO:GO:0042981 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 SUPFAM:SSF49599
GeneTree:ENSGT00550000074359 PANTHER:PTHR10131:SF48
EMBL:AAEX03011373 Ensembl:ENSCAFT00000010962 OMA:CLMALRN
Uniprot:E2RDE8
Length = 562
Score = 132 (51.5 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 34/88 (38%), Positives = 48/88 (54%)
Query: 9 YSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTAL 64
+S FY+ GY+ C R+++ AQ Y+SLF+H +QGE D L WPF G IR L
Sbjct: 395 HSPGFYTGKPGYKLCMRLHLQLPTAQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLAIL 454
Query: 65 NTSSEFSIT---DEIQSDK-NFDSFKRP 88
+ SE + +EI K +F+RP
Sbjct: 455 D-QSEAPVRQNHEEIMDAKPELLAFQRP 481
>UNIPROTKB|I3LBF4 [details] [associations]
symbol:LOC100737614 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0046330 "positive regulation of JNK cascade"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0007250 "activation of NF-kappaB-inducing kinase activity"
evidence=IEA] InterPro:IPR001293 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR012227 InterPro:IPR027138
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50144 PROSITE:PS50145
SMART:SM00061 GO:GO:0007165 GO:GO:0042981 GO:GO:0046872
GO:GO:0008270 SUPFAM:SSF49599 GeneTree:ENSGT00550000074359
PANTHER:PTHR10131:SF46 Ensembl:ENSSSCT00000029879 OMA:INDIVTH
Uniprot:I3LBF4
Length = 416
Score = 129 (50.5 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 33/128 (25%), Positives = 66/128 (51%)
Query: 9 YSACFYSSCFGYRFCTRVNISRE---DAQYLSLFIHLVQGENDDILDWPFVGRIRFTALN 65
+S FY+ +GY+ ++ + +LSL+I ++ G D++L+WPF R+ F+ L+
Sbjct: 279 FSPAFYTHKYGYKLQVSAFLNGNGSGEGTHLSLYIRVLPGAFDNLLEWPFARRVTFSLLD 338
Query: 66 TSSEF-----SITDEIQSDKNFDSFKRPVNF--FLNKKA--FGFNNFIRVADVLDPGRGF 116
S +T+ D N+ +F++P + L++ + FG+ FI D+ R +
Sbjct: 339 QSEPGLAKPQHVTETFHPDPNWKNFQKPGTWRGSLDESSLGFGYPKFISHQDIRK--RNY 396
Query: 117 LMEDDTFV 124
+ +D F+
Sbjct: 397 VRDDAVFI 404
>UNIPROTKB|F1RNA8 [details] [associations]
symbol:TRAF4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046330 "positive regulation of JNK cascade"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0007250 "activation of NF-kappaB-inducing kinase activity"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] InterPro:IPR001293 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR012227 InterPro:IPR013323
InterPro:IPR027138 Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50144
PROSITE:PS50145 SMART:SM00061 GO:GO:0007165 GO:GO:0042981
GO:GO:0046872 GO:GO:0008270 GO:GO:0004842 SUPFAM:SSF49599
Gene3D:3.90.890.10 OMA:EAFESHE PANTHER:PTHR10131:SF46 EMBL:FP016171
Ensembl:ENSSSCT00000019347 Uniprot:F1RNA8
Length = 423
Score = 129 (50.5 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 33/128 (25%), Positives = 66/128 (51%)
Query: 9 YSACFYSSCFGYRFCTRVNISRE---DAQYLSLFIHLVQGENDDILDWPFVGRIRFTALN 65
+S FY+ +GY+ ++ + +LSL+I ++ G D++L+WPF R+ F+ L+
Sbjct: 286 FSPAFYTHKYGYKLQVSAFLNGNGSGEGTHLSLYIRVLPGAFDNLLEWPFARRVTFSLLD 345
Query: 66 TSSEF-----SITDEIQSDKNFDSFKRPVNF--FLNKKA--FGFNNFIRVADVLDPGRGF 116
S +T+ D N+ +F++P + L++ + FG+ FI D+ R +
Sbjct: 346 QSEPGLAKPQHVTETFHPDPNWKNFQKPGTWRGSLDESSLGFGYPKFISHQDIRK--RNY 403
Query: 117 LMEDDTFV 124
+ +D F+
Sbjct: 404 VRDDAVFI 411
>UNIPROTKB|F6RJL7 [details] [associations]
symbol:TRAF4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090073 "positive regulation of protein
homodimerization activity" evidence=IEA] [GO:0050699 "WW domain
binding" evidence=IEA] [GO:0046330 "positive regulation of JNK
cascade" evidence=IEA] [GO:0031996 "thioesterase binding"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0030323 "respiratory tube development"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0007585 "respiratory gaseous exchange" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0007250 "activation of NF-kappaB-inducing kinase activity"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR013323 InterPro:IPR027138
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144
PROSITE:PS50145 SMART:SM00061 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 GO:GO:0007165
GO:GO:0042981 GO:GO:0046872 GO:GO:0008270 GO:GO:0046330
GO:GO:0045860 GO:GO:0007585 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 InterPro:IPR017907 SUPFAM:SSF49599 GO:GO:0090073
Gene3D:3.90.890.10 GO:GO:0030323 GeneTree:ENSGT00550000074359
OMA:EAFESHE PANTHER:PTHR10131:SF46 EMBL:DAAA02048606
IPI:IPI00686516 UniGene:Bt.8676 ProteinModelPortal:F6RJL7
Ensembl:ENSBTAT00000056164 Uniprot:F6RJL7
Length = 470
Score = 129 (50.5 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 33/128 (25%), Positives = 66/128 (51%)
Query: 9 YSACFYSSCFGYRFCTRVNISRE---DAQYLSLFIHLVQGENDDILDWPFVGRIRFTALN 65
+S FY+ +GY+ ++ + +LSL+I ++ G D++L+WPF R+ F+ L+
Sbjct: 333 FSPAFYTHKYGYKLQVSAFLNGNGSGEGTHLSLYIRVLPGAFDNLLEWPFARRVTFSLLD 392
Query: 66 TSSEF-----SITDEIQSDKNFDSFKRPVNF--FLNKKA--FGFNNFIRVADVLDPGRGF 116
S +T+ D N+ +F++P + L++ + FG+ FI D+ R +
Sbjct: 393 QSDPGLAKPQHVTETFHPDPNWKNFQKPGTWRGSLDESSLGFGYPKFISHQDIRK--RNY 450
Query: 117 LMEDDTFV 124
+ +D F+
Sbjct: 451 VRDDAVFI 458
>UNIPROTKB|Q9BUZ4 [details] [associations]
symbol:TRAF4 "TNF receptor-associated factor 4"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0007250 "activation of
NF-kappaB-inducing kinase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0007585 "respiratory gaseous exchange"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0030323 "respiratory tube development" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005923 "tight junction" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0045860 "positive regulation of protein kinase
activity" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0046330 "positive regulation of JNK cascade" evidence=IDA]
[GO:0090073 "positive regulation of protein homodimerization
activity" evidence=IDA] [GO:0050699 "WW domain binding"
evidence=IPI] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IPI] [GO:0031996 "thioesterase binding" evidence=IPI]
[GO:0007165 "signal transduction" evidence=TAS] [GO:0003677 "DNA
binding" evidence=TAS] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR013323 InterPro:IPR027138
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144
PROSITE:PS50145 SMART:SM00061 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0005886 GO:GO:0005634 GO:GO:0005737
GO:GO:0048471 GO:GO:0006915 GO:GO:0007165 GO:GO:0042981
GO:GO:0005856 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0046330 GO:GO:0045860 GO:GO:0005923 GO:GO:0007585
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 SUPFAM:SSF49599 GO:GO:0090073 Gene3D:3.90.890.10
eggNOG:NOG321306 GO:GO:0030323 EMBL:AC010761 EMBL:X80200
EMBL:AF082185 EMBL:AY937224 EMBL:DQ323999 EMBL:BC001769
IPI:IPI00017037 IPI:IPI00162088 PIR:I38026 RefSeq:NP_004286.2
UniGene:Hs.8375 PDB:2EOD PDB:2YUC PDBsum:2EOD PDBsum:2YUC
ProteinModelPortal:Q9BUZ4 SMR:Q9BUZ4 IntAct:Q9BUZ4 MINT:MINT-107471
STRING:Q9BUZ4 PhosphoSite:Q9BUZ4 DMDM:30580636 PaxDb:Q9BUZ4
PeptideAtlas:Q9BUZ4 PRIDE:Q9BUZ4 DNASU:9618 Ensembl:ENST00000262395
Ensembl:ENST00000262396 GeneID:9618 KEGG:hsa:9618 UCSC:uc002hcq.1
UCSC:uc002hcs.3 CTD:9618 GeneCards:GC17P027071 HGNC:HGNC:12034
HPA:CAB009055 MIM:602464 neXtProt:NX_Q9BUZ4 PharmGKB:PA36711
HOGENOM:HOG000004841 HOVERGEN:HBG103438 InParanoid:Q9BUZ4 KO:K09848
OMA:EAFESHE OrthoDB:EOG4868C9 ChiTaRS:TRAF4
EvolutionaryTrace:Q9BUZ4 GenomeRNAi:9618 NextBio:36083
ArrayExpress:Q9BUZ4 Bgee:Q9BUZ4 CleanEx:HS_TRAF4
Genevestigator:Q9BUZ4 GermOnline:ENSG00000076604
PANTHER:PTHR10131:SF46 Uniprot:Q9BUZ4
Length = 470
Score = 129 (50.5 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 33/128 (25%), Positives = 66/128 (51%)
Query: 9 YSACFYSSCFGYRFCTRVNISRE---DAQYLSLFIHLVQGENDDILDWPFVGRIRFTALN 65
+S FY+ +GY+ ++ + +LSL+I ++ G D++L+WPF R+ F+ L+
Sbjct: 333 FSPAFYTHKYGYKLQVSAFLNGNGSGEGTHLSLYIRVLPGAFDNLLEWPFARRVTFSLLD 392
Query: 66 TSSEF-----SITDEIQSDKNFDSFKRPVNF--FLNKKA--FGFNNFIRVADVLDPGRGF 116
S +T+ D N+ +F++P + L++ + FG+ FI D+ R +
Sbjct: 393 QSDPGLAKPQHVTETFHPDPNWKNFQKPGTWRGSLDESSLGFGYPKFISHQDIRK--RNY 450
Query: 117 LMEDDTFV 124
+ +D F+
Sbjct: 451 VRDDAVFI 458
>ZFIN|ZDB-GENE-040308-1 [details] [associations]
symbol:traf4a "tnf receptor-associated factor 4a"
species:7955 "Danio rerio" [GO:0046330 "positive regulation of JNK
cascade" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0007250
"activation of NF-kappaB-inducing kinase activity" evidence=IEA]
[GO:0042981 "regulation of apoptotic process" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR013323 InterPro:IPR027138
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144
PROSITE:PS50145 SMART:SM00061 SMART:SM00184 Prosite:PS00518
ZFIN:ZDB-GENE-040308-1 GO:GO:0007165 GO:GO:0042981 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10
eggNOG:NOG321306 HSSP:Q12933 GeneTree:ENSGT00550000074359
HOGENOM:HOG000004841 HOVERGEN:HBG103438 KO:K09848 OrthoDB:EOG4868C9
PANTHER:PTHR10131:SF46 EMBL:CR855391 EMBL:CR848661 EMBL:BC065969
EMBL:AJ556548 IPI:IPI00486500 RefSeq:NP_991325.1 UniGene:Dr.81750
SMR:Q7T1K2 Ensembl:ENSDART00000016024 GeneID:404045 KEGG:dre:404045
CTD:404045 InParanoid:Q7T1K2 OMA:TECPKRT NextBio:20817516
Uniprot:Q7T1K2
Length = 470
Score = 129 (50.5 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 34/132 (25%), Positives = 69/132 (52%)
Query: 5 NRYFYSACFYSSCFGYRFCTRVNISRE---DAQYLSLFIHLVQGENDDILDWPFVGRIRF 61
N F+S FY+ +GY+ ++ + +LS++I ++ GE D++L+WPF ++ F
Sbjct: 329 NHEFFSPPFYTHRYGYKLQVSAFLNGNGSGEGSHLSIYIRVLPGEYDNLLEWPFSYKVTF 388
Query: 62 TALNTSS-EFS----ITDEIQSDKNFDSFKRPVNF--FLNKKA--FGFNNFIRVADVLDP 112
+ L+ S S IT+ D N+ +F++P + L++ FG+ FI ++
Sbjct: 389 SILDQSDPSLSKPQHITETFNPDPNWKNFQKPCSSRNSLDESTLGFGYPKFISHEEIKK- 447
Query: 113 GRGFLMEDDTFV 124
R ++ ++ F+
Sbjct: 448 -RNYIRDNSIFL 458
>MGI|MGI:1202880 [details] [associations]
symbol:Traf4 "TNF receptor associated factor 4"
species:10090 "Mus musculus" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005923 "tight junction" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007585 "respiratory gaseous exchange"
evidence=IMP] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019901 "protein kinase binding"
evidence=IPI] [GO:0030054 "cell junction" evidence=IEA] [GO:0030323
"respiratory tube development" evidence=IMP] [GO:0031625 "ubiquitin
protein ligase binding" evidence=ISO] [GO:0031996 "thioesterase
binding" evidence=ISO] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0045860 "positive regulation of protein
kinase activity" evidence=ISO] [GO:0046330 "positive regulation of
JNK cascade" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0050699 "WW domain binding" evidence=ISO]
[GO:0090073 "positive regulation of protein homodimerization
activity" evidence=ISO] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR013323 InterPro:IPR027138
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144
PROSITE:PS50145 SMART:SM00061 SMART:SM00184 MGI:MGI:1202880
Pfam:PF00097 Prosite:PS00518 GO:GO:0005886 GO:GO:0005634
GO:GO:0005737 GO:GO:0048471 GO:GO:0006915 GO:GO:0007165
GO:GO:0042981 GO:GO:0005856 GO:GO:0046872 GO:GO:0008270
GO:GO:0046330 GO:GO:0045860 GO:GO:0005923 GO:GO:0007585
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 EMBL:CH466596
InterPro:IPR017907 SUPFAM:SSF49599 GO:GO:0090073 Gene3D:3.90.890.10
eggNOG:NOG321306 EMBL:AL591070 GO:GO:0030323
GeneTree:ENSGT00550000074359 CTD:9618 HOGENOM:HOG000004841
HOVERGEN:HBG103438 KO:K09848 OMA:EAFESHE OrthoDB:EOG4868C9
PANTHER:PTHR10131:SF46 EMBL:X92346 EMBL:AF233449 EMBL:AK035056
EMBL:AK040877 EMBL:AK053900 IPI:IPI00264492 RefSeq:NP_033449.2
UniGene:Mm.390418 ProteinModelPortal:Q61382 SMR:Q61382
STRING:Q61382 PhosphoSite:Q61382 PRIDE:Q61382 DNASU:22032
Ensembl:ENSMUST00000017530 GeneID:22032 KEGG:mmu:22032
InParanoid:Q8BHD9 NextBio:301790 Bgee:Q61382 CleanEx:MM_TRAF4
Genevestigator:Q61382 GermOnline:ENSMUSG00000017386 Uniprot:Q61382
Length = 470
Score = 127 (49.8 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 32/128 (25%), Positives = 66/128 (51%)
Query: 9 YSACFYSSCFGYRFCTRVNISRE---DAQYLSLFIHLVQGENDDILDWPFVGRIRFTALN 65
+S FY+ +GY+ ++ + +LS++I ++ G D++L+WPF R+ F+ L+
Sbjct: 333 FSPAFYTHKYGYKLQVSAFLNGNGSGEGTHLSIYIRVLPGAFDNLLEWPFARRVTFSLLD 392
Query: 66 TSSEF-----SITDEIQSDKNFDSFKRPVNF--FLNKKA--FGFNNFIRVADVLDPGRGF 116
S +T+ D N+ +F++P + L++ + FG+ FI D+ R +
Sbjct: 393 QSDPGLAKPQHVTETFHPDPNWKNFQKPGTWRGSLDESSLGFGYPKFISHQDIRK--RNY 450
Query: 117 LMEDDTFV 124
+ +D F+
Sbjct: 451 VRDDAVFI 458
>RGD|1306708 [details] [associations]
symbol:Traf4 "Tnf receptor associated factor 4" species:10116
"Rattus norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0007250 "activation of
NF-kappaB-inducing kinase activity" evidence=IEA] [GO:0007585
"respiratory gaseous exchange" evidence=IEA;ISO] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0019901 "protein kinase binding"
evidence=IEA;ISO] [GO:0030323 "respiratory tube development"
evidence=IEA;ISO] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA;ISO] [GO:0031996 "thioesterase binding"
evidence=IEA;ISO] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0045860 "positive regulation of protein kinase
activity" evidence=ISO] [GO:0046330 "positive regulation of JNK
cascade" evidence=IEA;ISO] [GO:0050699 "WW domain binding"
evidence=IEA;ISO] [GO:0090073 "positive regulation of protein
homodimerization activity" evidence=IEA;ISO] InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR012227 InterPro:IPR013323
InterPro:IPR027138 Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
Pfam:PF00097 RGD:1306708 Prosite:PS00518 GO:GO:0005634
GO:GO:0005737 GO:GO:0007165 GO:GO:0042981 GO:GO:0046872
GO:GO:0008270 GO:GO:0046330 GO:GO:0045860 GO:GO:0007585
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 EMBL:CH473948
InterPro:IPR017907 SUPFAM:SSF49599 GO:GO:0090073 Gene3D:3.90.890.10
eggNOG:NOG321306 GO:GO:0030323 GeneTree:ENSGT00550000074359
CTD:9618 HOGENOM:HOG000004841 HOVERGEN:HBG103438 KO:K09848
OMA:EAFESHE OrthoDB:EOG4868C9 PANTHER:PTHR10131:SF46 EMBL:BC162047
IPI:IPI00869573 RefSeq:NP_001100487.1 UniGene:Rn.3219 SMR:B1WC90
STRING:B1WC90 Ensembl:ENSRNOT00000018468 GeneID:303285
KEGG:rno:303285 NextBio:651050 Genevestigator:B1WC90 Uniprot:B1WC90
Length = 470
Score = 127 (49.8 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 32/128 (25%), Positives = 66/128 (51%)
Query: 9 YSACFYSSCFGYRFCTRVNISRE---DAQYLSLFIHLVQGENDDILDWPFVGRIRFTALN 65
+S FY+ +GY+ ++ + +LS++I ++ G D++L+WPF R+ F+ L+
Sbjct: 333 FSPAFYTHKYGYKLQVSAFLNGNGSGEGTHLSIYIRVLPGAFDNLLEWPFARRVTFSLLD 392
Query: 66 TSSEF-----SITDEIQSDKNFDSFKRPVNF--FLNKKA--FGFNNFIRVADVLDPGRGF 116
S +T+ D N+ +F++P + L++ + FG+ FI D+ R +
Sbjct: 393 QSDPGLAKPQHVTETFHPDPNWKNFQKPGTWRGSLDESSLGFGYPKFISHQDIRK--RNY 450
Query: 117 LMEDDTFV 124
+ +D F+
Sbjct: 451 VRDDAVFI 458
>UNIPROTKB|E2QYH9 [details] [associations]
symbol:TRAF4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046330 "positive regulation of JNK cascade"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0007250 "activation of NF-kappaB-inducing kinase activity"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR013323 InterPro:IPR027138
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144
PROSITE:PS50145 SMART:SM00061 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0007165 GO:GO:0042981 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10
GeneTree:ENSGT00550000074359 OMA:EAFESHE PANTHER:PTHR10131:SF46
EMBL:AAEX03006670 EMBL:AAEX03006669 Ensembl:ENSCAFT00000029849
Uniprot:E2QYH9
Length = 458
Score = 124 (48.7 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 32/122 (26%), Positives = 62/122 (50%)
Query: 9 YSACFYSSCFGYRFCTRVNISREDAQ--YLSLFIHLVQGENDDILDWPFVGRIRFTALNT 66
+S FY+ +GY+ + + +LSL+I ++ G D++L+WPF R+ F+ L+
Sbjct: 332 FSPAFYTHKYGYKLQVYAFLMHGSGEGTHLSLYIRVLPGAFDNLLEWPFARRVTFSLLDQ 391
Query: 67 SSEFSITDEIQSDKNFDSFKRPVNF--FLNKKA--FGFNNFIRVADVLDPGRGFLMEDDT 122
S + D N+ F++P + L++ + FG+ FI D+ R ++ +D
Sbjct: 392 SDP-----ALHPDPNWKDFQKPGTWRGSLDESSLGFGYPKFISHQDIRK--RNYVRDDAV 444
Query: 123 FV 124
F+
Sbjct: 445 FI 446
>UNIPROTKB|E1B7B4 [details] [associations]
symbol:MEP1B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016020 "membrane" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] InterPro:IPR000742 InterPro:IPR000998
InterPro:IPR001506 InterPro:IPR002083 InterPro:IPR006026
InterPro:IPR008294 InterPro:IPR008974 InterPro:IPR024079
Pfam:PF00629 Pfam:PF00917 Pfam:PF01400 PIRSF:PIRSF001196
PRINTS:PR00020 PRINTS:PR00480 PROSITE:PS00740 PROSITE:PS50026
PROSITE:PS50060 PROSITE:PS50144 SMART:SM00061 SMART:SM00137
SMART:SM00181 SMART:SM00235 GO:GO:0016020 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.40.390.10 SUPFAM:SSF49599
GeneTree:ENSGT00550000074269 CTD:4225 KO:K08606 OMA:ETQCPHH
EMBL:DAAA02056449 EMBL:DAAA02056450 IPI:IPI00692782
RefSeq:NP_001137570.1 UniGene:Bt.29198 Ensembl:ENSBTAT00000048571
GeneID:540701 KEGG:bta:540701 NextBio:20878782 Uniprot:E1B7B4
Length = 700
Score = 98 (39.6 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 5 NRYFYSACFYSSCFGYRFCTRVNISREDAQYLSLFIHLVQGENDDILDWP 54
N FYS FYSS GY F +N+ + + ++ HL+ G NDD L+WP
Sbjct: 445 NGSFYSPPFYSSK-GYAFQIYLNL--DSLPKIGMYFHLISGANDDHLEWP 491
Score = 48 (22.0 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 13/43 (30%), Positives = 24/43 (55%)
Query: 92 FLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQVTEMTH 134
F + GF NF+ ++L R F+ DD +++ T V +++H
Sbjct: 551 FQRGRGRGFPNFMS-QEMLK-SRDFIKGDDVYILLT-VEDISH 590
>ZFIN|ZDB-GENE-071120-3 [details] [associations]
symbol:traf5 "Tnf receptor-associated factor 5"
species:7955 "Danio rerio" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0042981 "regulation of apoptotic process" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0043123
"positive regulation of I-kappaB kinase/NF-kappaB cascade"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR012227 InterPro:IPR013323
InterPro:IPR027130 Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
Prosite:PS00518 ZFIN:ZDB-GENE-071120-3 GO:GO:0007165 GO:GO:0042981
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10
GeneTree:ENSGT00550000074359 PANTHER:PTHR10131:SF23 EMBL:AL954145
EMBL:CABZ01066660 IPI:IPI00899574 Ensembl:ENSDART00000040550
Uniprot:F1QV00
Length = 512
Score = 119 (46.9 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 34/107 (31%), Positives = 52/107 (48%)
Query: 2 KEINRYFYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWPFVGR 58
KE S+ FY+S GY+ R + + + ++SL+I +++G+ D L WPF
Sbjct: 405 KESGAALSSSPFYTSRSGYKLSVRAYLGGDGSGRGSHMSLYITIMRGDFDSFLPWPFRQN 464
Query: 59 IRFTALNTSSEFS-ITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFI 104
I T L+ S + ++ D N DSF RP + A GF FI
Sbjct: 465 ITLTLLDQSGTRNHMSHTFIPDVNSDSFHRPTSDA--NVATGFTRFI 509
>FB|FBgn0026319 [details] [associations]
symbol:Traf4 "TNF-receptor-associated factor 4" species:7227
"Drosophila melanogaster" [GO:0007391 "dorsal closure"
evidence=TAS] [GO:0009790 "embryo development" evidence=IEP]
[GO:0002168 "instar larval development" evidence=IEP] [GO:0008063
"Toll signaling pathway" evidence=NAS] [GO:0006952 "defense
response" evidence=NAS] [GO:0007165 "signal transduction"
evidence=NAS] [GO:0048102 "autophagic cell death" evidence=IEP]
[GO:0035071 "salivary gland cell autophagic cell death"
evidence=IEP] [GO:0046529 "imaginal disc fusion, thorax closure"
evidence=IGI] [GO:0046330 "positive regulation of JNK cascade"
evidence=IGI] [GO:0001654 "eye development" evidence=IMP]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IMP] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0006911
"phagocytosis, engulfment" evidence=IMP] [GO:0045167 "asymmetric
protein localization involved in cell fate determination"
evidence=IMP] [GO:0045179 "apical cortex" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007370 "ventral furrow formation" evidence=IMP]
[GO:0003384 "apical constriction involved in gastrulation"
evidence=IMP] [GO:0045177 "apical part of cell" evidence=IDA]
[GO:0034332 "adherens junction organization" evidence=IMP]
InterPro:IPR001293 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR013323 Pfam:PF00917
PIRSF:PIRSF015614 PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061
GO:GO:0045167 GO:GO:0006911 EMBL:AE014134 GO:GO:0046872
GO:GO:0007391 GO:GO:0008270 GO:GO:0046330 GO:GO:0043065
GO:GO:0045179 GO:GO:0007370 GO:GO:0035071 GO:GO:0004842
GO:GO:0008063 SUPFAM:SSF49599 GO:GO:0001654 GO:GO:0002168
GO:GO:0046529 Gene3D:3.90.890.10 eggNOG:NOG321306
GeneTree:ENSGT00550000074359 CTD:9618 KO:K09848
RefSeq:NP_001097080.1 UniGene:Dm.3100 ProteinModelPortal:A8DYU9
SMR:A8DYU9 STRING:A8DYU9 EnsemblMetazoa:FBtr0112925 GeneID:33638
KEGG:dme:Dmel_CG3048 UCSC:CG3048-RC FlyBase:FBgn0026319 OMA:DPTWENF
OrthoDB:EOG48GTJM PhylomeDB:A8DYU9 GenomeRNAi:33638 NextBio:784548
Bgee:A8DYU9 Uniprot:A8DYU9
Length = 559
Score = 118 (46.6 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 33/118 (27%), Positives = 60/118 (50%)
Query: 13 FYSSCFGYRFCTRVNISRE---DAQYLSLFIHLVQGENDDILDWPFVGRIRFTALNT--- 66
FY+S +GY+ + ++ + ++S++I ++ GE D +L WPF I FT
Sbjct: 433 FYTSQYGYKLQASMFLNGNGPGENTHVSVYIKVLPGEYDALLKWPFSHSITFTLFEQGAQ 492
Query: 67 SSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 124
S + + + D +++F+RP N ++ FGF FI ++L R F+ D F+
Sbjct: 493 SGQGGVAESFVPDPTWENFQRPSNE-PDQLGFGFPRFIS-HELLH-SRPFIKGDTVFL 547
>ZFIN|ZDB-GENE-040305-2 [details] [associations]
symbol:traf4b "tnf receptor-associated factor 4b"
species:7955 "Danio rerio" [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046330 "positive regulation of JNK cascade" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0007250
"activation of NF-kappaB-inducing kinase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR012227 InterPro:IPR013323
InterPro:IPR027138 Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 ZFIN:ZDB-GENE-040305-2 GO:GO:0007165
GO:GO:0042981 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907 SUPFAM:SSF49599
Gene3D:3.90.890.10 eggNOG:NOG321306 HSSP:Q12933
GeneTree:ENSGT00550000074359 HOGENOM:HOG000004841
HOVERGEN:HBG103438 OrthoDB:EOG4868C9 PANTHER:PTHR10131:SF46
EMBL:CU463284 EMBL:BC078361 EMBL:AJ556549 IPI:IPI00487539
RefSeq:NP_997982.1 UniGene:Dr.15893 SMR:Q7T1K1
Ensembl:ENSDART00000056878 GeneID:404035 KEGG:dre:404035 CTD:404035
InParanoid:Q7T1K1 OMA:LASHNEA NextBio:20817511 Uniprot:Q7T1K1
Length = 478
Score = 113 (44.8 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 28/89 (31%), Positives = 47/89 (52%)
Query: 9 YSACFYSSCFGYRFCTRV----NISREDAQYLSLFIHLVQGENDDILDWPFVGRIRFTAL 64
+S FYS +GYR N S ED ++S+++ ++ GE D +L+WPF R+ F+ L
Sbjct: 335 FSPAFYSHNYGYRLQVSAFLNGNGSGEDT-HMSVYLRVLPGEYDGLLEWPFPYRVSFSLL 393
Query: 65 NT-----SSEFSITDEIQSDKNFDSFKRP 88
+ + IT+ D + +F+RP
Sbjct: 394 DQCDPALTKPQHITETFSPDPTWKNFQRP 422
>UNIPROTKB|I3LC29 [details] [associations]
symbol:TRAF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051092 "positive regulation of NF-kappaB transcription
factor activity" evidence=IEA] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0031996 "thioesterase binding"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR027136
Pfam:PF00917 PROSITE:PS50144 SMART:SM00061 GO:GO:0042981
GO:GO:0051092 SUPFAM:SSF49599 OMA:RRCHESA PANTHER:PTHR10131:SF29
GeneTree:ENSGT00550000074359 Ensembl:ENSSSCT00000023374
Uniprot:I3LC29
Length = 336
Score = 105 (42.0 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 19/54 (35%), Positives = 35/54 (64%)
Query: 9 YSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWPFVGRI 59
+S FY++ +GY+ C R+ ++ + +LSLFI +++GE D +L WPF ++
Sbjct: 265 FSPAFYTAKYGYKLCLRLYLNGDGTGKKTHLSLFIVIMRGEYDALLPWPFRNKV 318
>RGD|3081 [details] [associations]
symbol:Mep1b "meprin 1 beta" species:10116 "Rattus norvegicus"
[GO:0004222 "metalloendopeptidase activity" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0006508 "proteolysis"
evidence=NAS] [GO:0006954 "inflammatory response" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016020 "membrane"
evidence=ISO] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR000742 InterPro:IPR000998 InterPro:IPR001506
InterPro:IPR002083 InterPro:IPR006026 InterPro:IPR008294
InterPro:IPR008974 InterPro:IPR024079 Pfam:PF00629 Pfam:PF00917
Pfam:PF01400 PIRSF:PIRSF001196 PRINTS:PR00020 PRINTS:PR00480
PROSITE:PS00142 PROSITE:PS00740 PROSITE:PS50026 PROSITE:PS50060
PROSITE:PS50144 SMART:SM00061 SMART:SM00137 SMART:SM00181
SMART:SM00235 RGD:3081 GO:GO:0016021 GO:GO:0046872 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 PROSITE:PS00022 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.40.390.10 PROSITE:PS01186 SUPFAM:SSF49599
EMBL:CH473974 HOVERGEN:HBG052457 MEROPS:M12.004 CTD:4225 KO:K08606
EMBL:M88601 EMBL:BC081833 IPI:IPI00204808 PIR:A42908
RefSeq:NP_037315.1 UniGene:Rn.3520 ProteinModelPortal:P28826
PRIDE:P28826 GeneID:25727 KEGG:rno:25727 NextBio:607841
Genevestigator:P28826 Uniprot:P28826
Length = 704
Score = 93 (37.8 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 20/46 (43%), Positives = 26/46 (56%)
Query: 9 YSACFYSSCFGYRFCTRVNISREDAQYLSLFIHLVQGENDDILDWP 54
YS FYSS GY F ++N+ + L+ HL+ G NDD L WP
Sbjct: 449 YSPPFYSSK-GYAF--QINLDLTSPTNVGLYFHLISGANDDQLQWP 491
Score = 43 (20.2 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 22/79 (27%), Positives = 35/79 (44%)
Query: 67 SSEFSIT-DEIQSDKNFDS-FKRPVN-----FFLNKKAF----GFNNFIRVADVLDPGRG 115
S++ SIT D +D N + RP FF N F G+ + + R
Sbjct: 513 SNQRSITTDPKMTDDNGSYLWDRPSKVGVEAFFPNGTQFSRGRGYGTSVFITQERLKSRE 572
Query: 116 FLMEDDTFVIKTQVTEMTH 134
FL DD +++ T V +++H
Sbjct: 573 FLKGDDVYILLT-VEDISH 590
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.328 0.141 0.434 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 134 134 0.00091 102 3 11 22 0.47 30
30 0.44 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 66
No. of states in DFA: 577 (61 KB)
Total size of DFA: 132 KB (2083 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 13.80u 0.11s 13.91t Elapsed: 00:00:08
Total cpu time: 13.81u 0.11s 13.92t Elapsed: 00:00:08
Start: Thu Aug 15 14:47:17 2013 End: Thu Aug 15 14:47:25 2013