Query psy4547
Match_columns 92
No_of_seqs 152 out of 1385
Neff 9.8
Searched_HMMs 46136
Date Fri Aug 16 19:51:22 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4547.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/4547hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1176|consensus 99.9 2.7E-28 5.9E-33 166.0 6.9 82 1-92 376-457 (537)
2 PLN02614 long-chain acyl-CoA s 99.9 3E-26 6.5E-31 159.5 6.4 80 2-92 466-546 (666)
3 COG0318 CaiC Acyl-CoA syntheta 99.9 3.7E-25 7.9E-30 150.9 7.2 81 2-92 370-450 (534)
4 PLN02861 long-chain-fatty-acid 99.9 2.6E-25 5.6E-30 154.6 6.5 79 3-92 464-543 (660)
5 PLN02736 long-chain acyl-CoA s 99.9 3.2E-25 6.8E-30 153.8 6.2 80 3-92 457-537 (651)
6 TIGR03443 alpha_am_amid L-amin 99.9 1E-24 2.3E-29 160.1 8.5 92 1-92 618-727 (1389)
7 PTZ00216 acyl-CoA synthetase; 99.9 4.2E-25 9.2E-30 154.4 6.2 81 2-92 505-586 (700)
8 PRK09274 peptide synthase; Pro 99.9 2E-24 4.3E-29 147.0 8.6 85 2-92 385-469 (552)
9 PRK06334 long chain fatty acid 99.9 4E-24 8.7E-29 145.7 9.6 83 1-92 377-459 (539)
10 PLN02387 long-chain-fatty-acid 99.9 1.4E-24 2.9E-29 151.8 7.3 84 3-92 501-585 (696)
11 PLN02860 o-succinylbenzoate-Co 99.9 3.1E-24 6.7E-29 146.6 8.7 82 1-92 382-463 (563)
12 PTZ00342 acyl-CoA synthetase; 99.9 1.9E-24 4.1E-29 152.1 7.8 80 3-92 540-620 (746)
13 PRK07769 long-chain-fatty-acid 99.9 1.5E-24 3.3E-29 149.8 7.0 91 1-92 415-513 (631)
14 PTZ00237 acetyl-CoA synthetase 99.9 5.1E-24 1.1E-28 147.9 7.8 83 1-92 456-541 (647)
15 PLN02574 4-coumarate--CoA liga 99.9 8.4E-24 1.8E-28 144.4 7.3 82 1-92 398-479 (560)
16 PRK12467 peptide synthase; Pro 99.9 6E-24 1.3E-28 165.7 7.3 89 1-92 3432-3520(3956)
17 KOG1177|consensus 99.9 9.8E-24 2.1E-28 140.5 7.2 81 2-92 430-510 (596)
18 COG1022 FAA1 Long-chain acyl-C 99.9 4.9E-24 1.1E-28 146.7 5.3 81 2-92 418-499 (613)
19 PRK10252 entF enterobactin syn 99.9 3.3E-23 7.1E-28 151.3 9.4 88 1-92 799-886 (1296)
20 COG0365 Acs Acyl-coenzyme A sy 99.9 1.3E-23 2.9E-28 142.8 6.4 79 2-92 365-445 (528)
21 PRK12316 peptide synthase; Pro 99.9 1.8E-23 3.9E-28 164.9 8.0 89 1-92 2342-2430(5163)
22 TIGR02188 Ac_CoA_lig_AcsA acet 99.9 3.1E-23 6.7E-28 143.1 8.2 84 1-92 439-524 (625)
23 PRK05691 peptide synthase; Val 99.9 3.6E-23 7.9E-28 162.1 8.8 89 1-92 4063-4151(4334)
24 PRK12476 putative fatty-acid-- 99.9 2.3E-23 4.9E-28 143.6 6.9 91 1-92 426-525 (612)
25 PLN02654 acetate-CoA ligase 99.9 3.3E-23 7.2E-28 144.3 7.7 83 2-92 478-562 (666)
26 PRK00174 acetyl-CoA synthetase 99.9 5.1E-23 1.1E-27 142.4 8.3 84 1-92 447-532 (637)
27 PRK06164 acyl-CoA synthetase; 99.9 5.8E-23 1.3E-27 139.4 8.3 82 1-92 374-455 (540)
28 PRK07529 AMP-binding domain pr 99.9 8.1E-23 1.8E-27 141.5 9.1 81 1-92 414-494 (632)
29 PRK12316 peptide synthase; Pro 99.9 5.9E-23 1.3E-27 162.1 9.1 88 1-92 3386-3473(5163)
30 PLN03102 acyl-activating enzym 99.9 5.4E-23 1.2E-27 141.1 7.8 79 3-92 391-469 (579)
31 PRK05851 long-chain-fatty-acid 99.9 9.4E-23 2E-27 138.4 8.6 75 2-92 370-444 (525)
32 PRK05857 acyl-CoA synthetase; 99.9 7.5E-23 1.6E-27 139.3 7.7 80 2-92 372-451 (540)
33 PLN02430 long-chain-fatty-acid 99.9 4.7E-23 1E-27 143.5 6.7 79 3-92 464-543 (660)
34 PRK12467 peptide synthase; Pro 99.9 8.6E-23 1.9E-27 159.4 8.7 89 1-92 1915-2003(3956)
35 TIGR01217 ac_ac_CoA_syn acetoa 99.9 1E-22 2.2E-27 141.5 8.3 84 1-92 461-548 (652)
36 PRK05677 long-chain-fatty-acid 99.9 1.2E-22 2.7E-27 138.7 8.3 82 1-92 401-482 (562)
37 PRK05850 acyl-CoA synthetase; 99.9 9.9E-23 2.2E-27 139.3 7.5 90 1-91 394-484 (578)
38 TIGR02275 DHB_AMP_lig 2,3-dihy 99.9 1.5E-22 3.3E-27 137.2 7.5 82 1-92 376-457 (527)
39 PRK03584 acetoacetyl-CoA synth 99.9 2.9E-22 6.2E-27 139.1 8.6 86 1-92 460-547 (655)
40 PRK05691 peptide synthase; Val 99.9 2.5E-22 5.4E-27 157.5 9.2 89 1-92 1466-1554(4334)
41 PRK06060 acyl-CoA synthetase; 99.9 2.2E-22 4.9E-27 140.6 7.9 79 1-92 336-414 (705)
42 PRK09088 acyl-CoA synthetase; 99.9 3E-22 6.4E-27 134.5 8.1 81 2-92 330-410 (488)
43 PLN02246 4-coumarate--CoA liga 99.9 2.9E-22 6.3E-27 136.1 8.1 82 1-92 380-461 (537)
44 PRK13390 acyl-CoA synthetase; 99.9 2.8E-22 6.1E-27 135.1 7.9 84 1-92 345-428 (501)
45 PRK12492 long-chain-fatty-acid 99.9 3.4E-22 7.4E-27 136.5 8.4 82 1-92 409-490 (562)
46 PRK10946 entE enterobactin syn 99.9 3.2E-22 7E-27 136.0 7.8 82 1-92 377-458 (536)
47 PLN03051 acyl-activating enzym 99.9 6.9E-22 1.5E-26 133.6 9.3 87 3-92 318-407 (499)
48 TIGR02316 propion_prpE propion 99.9 4.6E-22 9.9E-27 137.6 8.6 85 1-92 434-521 (628)
49 PRK05852 acyl-CoA synthetase; 99.9 3.6E-22 7.7E-27 135.6 7.7 81 1-92 377-457 (534)
50 PRK04319 acetyl-CoA synthetase 99.9 4.5E-22 9.7E-27 136.1 7.3 81 1-92 399-481 (570)
51 PLN02479 acetate-CoA ligase 99.9 7E-22 1.5E-26 135.2 7.8 79 3-92 401-479 (567)
52 COG1021 EntE Peptide arylation 99.9 2E-22 4.4E-27 132.2 4.8 81 1-91 382-462 (542)
53 PRK07638 acyl-CoA synthetase; 99.9 9.1E-22 2E-26 132.2 7.7 81 1-92 330-410 (487)
54 PRK08633 2-acyl-glycerophospho 99.9 6.3E-22 1.4E-26 143.1 7.3 83 1-90 984-1066(1146)
55 PRK13388 acyl-CoA synthetase; 99.9 1E-21 2.3E-26 133.8 7.9 80 2-92 349-429 (540)
56 PRK06145 acyl-CoA synthetase; 99.9 7E-22 1.5E-26 132.8 6.8 80 2-92 343-422 (497)
57 PRK07445 O-succinylbenzoic aci 99.9 2.5E-21 5.5E-26 129.9 9.2 75 2-92 299-373 (452)
58 TIGR01734 D-ala-DACP-lig D-ala 99.9 2.4E-21 5.2E-26 130.3 9.1 84 1-92 339-422 (502)
59 PLN02330 4-coumarate--CoA liga 99.9 5.9E-22 1.3E-26 134.9 6.2 82 1-92 385-466 (546)
60 TIGR01733 AA-adenyl-dom amino 99.9 3E-21 6.5E-26 126.7 8.9 89 2-92 316-404 (408)
61 PRK08314 long-chain-fatty-acid 99.9 1.5E-21 3.2E-26 132.6 7.6 84 2-92 382-465 (546)
62 PRK08008 caiC putative crotono 99.9 1.3E-21 2.8E-26 132.2 7.3 82 1-92 363-447 (517)
63 PRK07059 Long-chain-fatty-acid 99.9 1.5E-21 3.2E-26 133.2 7.6 82 1-92 403-484 (557)
64 PRK07787 acyl-CoA synthetase; 99.9 2.4E-21 5.3E-26 129.9 8.4 79 4-92 321-400 (471)
65 PRK07788 acyl-CoA synthetase; 99.9 3E-21 6.6E-26 131.4 8.7 78 1-92 399-476 (549)
66 PRK07514 malonyl-CoA synthase; 99.9 2.5E-21 5.4E-26 130.3 8.1 81 2-92 346-426 (504)
67 PRK06839 acyl-CoA synthetase; 99.9 1.9E-21 4.1E-26 130.5 7.5 81 1-92 340-420 (496)
68 PRK10524 prpE propionyl-CoA sy 99.9 2.5E-21 5.4E-26 133.8 8.1 85 1-92 435-522 (629)
69 PRK09192 acyl-CoA synthetase; 99.8 2.9E-21 6.3E-26 132.4 7.7 79 2-92 409-487 (579)
70 PRK08751 putative long-chain f 99.8 2.4E-21 5.1E-26 132.1 7.2 81 2-92 406-486 (560)
71 PRK07867 acyl-CoA synthetase; 99.8 4.5E-21 9.7E-26 130.5 8.4 78 4-92 352-430 (529)
72 PRK13295 cyclohexanecarboxylat 99.8 4.8E-21 1E-25 130.5 8.5 80 1-92 389-468 (547)
73 PRK08315 AMP-binding domain pr 99.8 3.1E-21 6.7E-26 131.3 7.6 82 1-92 395-476 (559)
74 TIGR03208 cyc_hxne_CoA_lg cycl 99.8 5.4E-21 1.2E-25 129.9 8.5 80 1-92 387-466 (538)
75 PRK06155 crotonobetaine/carnit 99.8 3.8E-21 8.2E-26 131.1 7.6 80 2-92 367-449 (542)
76 PRK08279 long-chain-acyl-CoA s 99.8 3.9E-21 8.5E-26 132.1 7.7 87 1-92 400-488 (600)
77 PRK07470 acyl-CoA synthetase; 99.8 3.6E-21 7.8E-26 130.4 7.5 81 1-92 363-443 (528)
78 KOG1256|consensus 99.8 1.4E-21 3E-26 134.8 5.4 80 2-91 496-576 (691)
79 PRK03640 O-succinylbenzoic aci 99.8 3.7E-21 8E-26 128.9 7.2 80 2-92 330-409 (483)
80 PRK12582 acyl-CoA synthetase; 99.8 3E-21 6.5E-26 133.5 6.5 81 2-92 421-508 (624)
81 PRK06178 acyl-CoA synthetase; 99.8 7E-21 1.5E-25 130.0 8.2 80 2-92 412-491 (567)
82 PRK08043 bifunctional acyl-[ac 99.8 1E-20 2.3E-25 132.6 9.0 87 2-91 551-639 (718)
83 TIGR03205 pimA dicarboxylate-- 99.8 8E-21 1.7E-25 129.2 7.7 80 2-92 391-470 (541)
84 PRK12583 acyl-CoA synthetase; 99.8 8.3E-21 1.8E-25 129.1 7.6 81 2-92 397-477 (558)
85 PRK08162 acyl-CoA synthetase; 99.8 6.7E-21 1.5E-25 129.5 7.1 78 4-92 388-465 (545)
86 PRK05620 long-chain-fatty-acid 99.8 6.7E-21 1.5E-25 130.5 7.0 91 2-92 383-479 (576)
87 PRK13391 acyl-CoA synthetase; 99.8 1.5E-20 3.2E-25 127.1 8.4 82 1-92 350-431 (511)
88 KOG1175|consensus 99.8 6.7E-21 1.5E-25 131.1 6.7 82 3-92 440-524 (626)
89 PRK06710 long-chain-fatty-acid 99.8 9.6E-21 2.1E-25 129.3 7.4 80 2-92 401-480 (563)
90 PRK05605 long-chain-fatty-acid 99.8 1.2E-20 2.7E-25 129.0 7.5 80 2-92 415-494 (573)
91 PRK06814 acylglycerophosphoeth 99.8 2.2E-20 4.7E-25 135.6 9.1 80 2-91 979-1058(1140)
92 PRK06087 short chain acyl-CoA 99.8 6.8E-21 1.5E-25 129.6 5.6 82 1-92 378-459 (547)
93 PRK07786 long-chain-fatty-acid 99.8 1.2E-20 2.7E-25 128.4 6.7 80 2-92 369-448 (542)
94 PRK08276 long-chain-fatty-acid 99.8 2.6E-20 5.7E-25 125.5 7.5 81 2-92 338-418 (502)
95 PRK07656 long-chain-fatty-acid 99.8 2.2E-20 4.8E-25 125.7 7.1 81 2-92 361-441 (513)
96 PRK13382 acyl-CoA synthetase; 99.8 4E-20 8.6E-25 125.9 8.2 77 2-92 389-465 (537)
97 PRK04813 D-alanine--poly(phosp 99.8 5.7E-20 1.2E-24 123.4 8.8 83 2-92 342-424 (503)
98 PRK08316 acyl-CoA synthetase; 99.8 2.4E-20 5.1E-25 125.8 6.9 80 2-92 365-444 (523)
99 PRK07768 long-chain-fatty-acid 99.8 6.6E-20 1.4E-24 124.7 9.1 81 1-92 383-463 (545)
100 PRK08180 feruloyl-CoA synthase 99.8 1.2E-20 2.7E-25 130.2 5.5 81 2-92 409-496 (614)
101 PRK07824 O-succinylbenzoic aci 99.8 6.1E-20 1.3E-24 119.6 8.2 76 4-92 207-282 (358)
102 TIGR03098 ligase_PEP_1 acyl-Co 99.8 4.7E-20 1E-24 124.3 7.8 91 2-92 352-443 (515)
103 PRK09029 O-succinylbenzoic aci 99.8 4.1E-20 8.9E-25 123.6 7.3 76 5-92 305-380 (458)
104 PRK08974 long-chain-fatty-acid 99.8 4.4E-20 9.6E-25 126.0 7.5 81 1-92 401-481 (560)
105 PRK06188 acyl-CoA synthetase; 99.8 4.6E-20 9.9E-25 124.9 7.1 81 1-92 362-442 (524)
106 TIGR02262 benz_CoA_lig benzoat 99.8 9.7E-20 2.1E-24 123.0 7.7 81 1-92 353-433 (508)
107 PRK07008 long-chain-fatty-acid 99.8 1.1E-19 2.3E-24 123.8 7.5 76 3-92 383-458 (539)
108 TIGR01923 menE O-succinylbenzo 99.8 1.4E-19 3.1E-24 119.9 7.7 79 3-92 291-369 (436)
109 PRK12406 long-chain-fatty-acid 99.8 2.2E-19 4.8E-24 121.3 8.6 81 1-92 347-428 (509)
110 PRK07868 acyl-CoA synthetase; 99.8 1.7E-19 3.6E-24 130.3 8.2 78 1-92 806-885 (994)
111 PRK13383 acyl-CoA synthetase; 99.8 2.8E-19 6E-24 121.1 8.3 78 1-92 368-445 (516)
112 KOG1180|consensus 99.8 4.7E-20 1E-24 124.7 4.4 81 4-91 483-564 (678)
113 PRK06187 long-chain-fatty-acid 99.8 6.1E-19 1.3E-23 118.7 6.9 80 2-92 365-444 (521)
114 PRK06018 putative acyl-CoA syn 99.8 2.2E-18 4.8E-23 117.4 8.5 77 3-92 383-459 (542)
115 PRK07798 acyl-CoA synthetase; 99.7 1E-17 2.2E-22 113.1 8.0 80 5-92 378-457 (533)
116 PLN03052 acetate--CoA ligase; 99.7 3.3E-17 7.1E-22 115.6 9.2 84 4-92 553-639 (728)
117 PF00501 AMP-binding: AMP-bind 99.7 6.8E-18 1.5E-22 111.3 4.3 62 1-72 356-417 (417)
118 PRK08308 acyl-CoA synthetase; 99.6 7.4E-16 1.6E-20 102.2 8.1 50 43-92 291-340 (414)
119 COG1020 EntF Non-ribosomal pep 99.6 1.1E-15 2.5E-20 105.9 5.8 79 1-89 564-642 (642)
120 KOG1179|consensus 99.6 3.7E-15 8.1E-20 101.4 6.9 87 1-91 445-536 (649)
121 TIGR02155 PA_CoA_ligase phenyl 99.5 3.3E-14 7.2E-19 94.9 7.5 50 43-92 289-344 (422)
122 TIGR02372 4_coum_CoA_lig 4-cou 99.5 2E-13 4.4E-18 90.7 6.4 50 43-92 275-324 (386)
123 PRK09188 serine/threonine prot 99.4 7.6E-13 1.7E-17 87.4 5.7 45 42-92 208-256 (365)
124 TIGR03335 F390_ftsA coenzyme F 98.9 4.9E-09 1.1E-13 70.9 7.1 45 44-88 299-352 (445)
125 KOG1178|consensus 98.8 7.9E-09 1.7E-13 75.4 4.7 52 41-92 452-503 (1032)
126 COG1541 PaaK Coenzyme F390 syn 98.6 2.8E-07 6E-12 62.3 6.9 49 44-92 303-360 (438)
127 PTZ00297 pantothenate kinase; 98.5 1.3E-07 2.9E-12 71.5 4.6 61 4-92 825-886 (1452)
128 KOG3628|consensus 98.5 3.2E-07 6.9E-12 67.3 6.1 86 2-91 1178-1278(1363)
129 KOG3628|consensus 97.7 1.7E-05 3.8E-10 58.6 1.3 83 1-83 527-611 (1363)
130 TIGR02304 aden_form_hyp probab 96.3 0.011 2.3E-07 40.6 4.9 48 44-91 296-358 (430)
131 PF03321 GH3: GH3 auxin-respon 95.9 0.013 2.9E-07 41.1 4.1 44 45-88 371-418 (528)
132 PLN02249 indole-3-acetic acid- 95.0 0.053 1.2E-06 38.8 4.6 43 45-87 410-456 (597)
133 PLN02247 indole-3-acetic acid- 90.9 0.65 1.4E-05 33.5 4.7 43 45-87 417-463 (606)
134 PLN02620 indole-3-acetic acid- 90.4 0.78 1.7E-05 33.2 4.8 43 45-87 423-469 (612)
135 COG1424 BioW Pimeloyl-CoA synt 79.6 3.6 7.8E-05 25.7 3.4 48 1-66 168-218 (239)
136 PF01436 NHL: NHL repeat; Int 69.2 7.5 0.00016 15.9 3.3 18 53-70 9-26 (28)
137 PF10411 DsbC_N: Disulfide bon 62.6 9.3 0.0002 18.6 2.1 19 47-65 32-50 (57)
138 PF04784 DUF547: Protein of un 61.9 13 0.00028 20.9 2.9 22 67-88 50-71 (117)
139 PF03744 BioW: 6-carboxyhexano 57.5 20 0.00044 23.1 3.4 19 1-19 172-191 (239)
140 PF04443 LuxE: Acyl-protein sy 56.5 44 0.00096 22.8 5.1 33 43-76 318-358 (365)
141 PF08485 Polysacc_syn_2C: Poly 50.5 16 0.00034 17.5 1.6 22 71-92 27-48 (48)
142 COG0386 BtuE Glutathione perox 48.3 20 0.00043 21.6 2.2 29 60-88 131-159 (162)
143 PF11253 DUF3052: Protein of u 47.0 32 0.0007 20.0 2.8 42 43-88 51-102 (127)
144 PF05452 Clavanin: Clavanin; 45.8 8.9 0.00019 19.7 0.4 10 40-49 70-79 (80)
145 TIGR01204 bioW 6-carboxyhexano 44.5 37 0.00081 21.8 3.1 19 1-19 165-184 (232)
146 PRK04306 50S ribosomal protein 43.0 48 0.001 18.4 3.0 32 44-75 34-72 (98)
147 PRK01322 6-carboxyhexanoate--C 42.3 49 0.0011 21.4 3.4 19 1-19 172-191 (242)
148 PF13642 DUF4144: protein stru 41.7 20 0.00044 19.8 1.5 46 43-89 29-77 (101)
149 PF07494 Reg_prop: Two compone 40.8 28 0.00061 13.6 1.6 11 52-62 11-21 (24)
150 COG4257 Vgb Streptogramin lyas 40.7 56 0.0012 22.0 3.5 15 51-65 153-167 (353)
151 smart00653 eIF2B_5 domain pres 40.2 56 0.0012 18.4 3.1 30 47-87 46-75 (110)
152 COG4014 Uncharacterized protei 38.9 68 0.0015 17.5 3.1 20 43-62 16-40 (97)
153 PF05278 PEARLI-4: Arabidopsis 38.5 49 0.0011 21.8 3.0 29 64-92 82-113 (269)
154 TIGR02804 ExbD_2 TonB system t 36.8 79 0.0017 17.7 3.6 28 51-88 54-81 (121)
155 PF12503 CMV_1a_C: Cucumber mo 36.1 14 0.0003 19.8 0.2 19 64-82 26-47 (85)
156 PTZ00189 60S ribosomal protein 33.5 79 0.0017 19.2 3.1 32 44-75 33-71 (160)
157 PF06739 SBBP: Beta-propeller 31.7 45 0.00097 14.7 1.5 15 52-66 19-33 (38)
158 KOG2768|consensus 31.5 63 0.0014 20.6 2.6 30 47-87 147-176 (231)
159 PF11848 DUF3368: Domain of un 30.9 47 0.001 15.5 1.6 19 70-88 29-47 (48)
160 PF11521 TFIIE-A_C-term: C-ter 29.9 98 0.0021 16.7 3.2 17 66-82 40-56 (86)
161 KOG0640|consensus 29.1 1.7E+02 0.0037 20.2 4.4 37 51-89 267-304 (430)
162 PF07338 DUF1471: Protein of u 28.9 61 0.0013 15.7 1.9 20 68-87 7-26 (56)
163 PRK11657 dsbG disulfide isomer 28.4 1.1E+02 0.0023 19.7 3.3 33 48-83 58-90 (251)
164 PF02563 Poly_export: Polysacc 28.4 95 0.0021 16.0 3.6 32 51-86 33-64 (82)
165 cd02969 PRX_like1 Peroxiredoxi 28.2 1.1E+02 0.0023 18.0 3.2 41 47-87 110-150 (171)
166 PLN00190 60S ribosomal protein 27.0 96 0.0021 18.8 2.7 31 44-74 33-70 (158)
167 PF13180 PDZ_2: PDZ domain; PD 26.2 88 0.0019 15.9 2.3 23 66-88 36-59 (82)
168 COG1504 Uncharacterized conser 25.9 53 0.0012 18.7 1.5 18 74-91 47-64 (121)
169 PRK09993 C-lysozyme inhibitor; 25.8 56 0.0012 19.6 1.6 32 58-90 117-148 (153)
170 PF01060 DUF290: Transthyretin 25.8 86 0.0019 16.2 2.2 20 51-70 33-52 (80)
171 PF00403 HMA: Heavy-metal-asso 25.4 45 0.00097 15.9 1.0 14 78-91 13-26 (62)
172 PF13453 zf-TFIIB: Transcripti 24.7 81 0.0018 14.0 1.9 16 71-86 25-40 (41)
173 PF04126 Cyclophil_like: Cyclo 24.1 74 0.0016 18.0 1.9 19 44-62 59-77 (120)
174 COG3592 Uncharacterized conser 24.1 69 0.0015 16.6 1.5 31 57-90 36-66 (74)
175 PF12757 DUF3812: Protein of u 23.8 80 0.0017 18.1 2.0 22 66-87 58-80 (126)
176 COG0075 Serine-pyruvate aminot 23.3 54 0.0012 22.7 1.4 48 44-91 76-132 (383)
177 PRK10606 btuE putative glutath 23.2 73 0.0016 19.5 1.9 29 59-87 149-179 (183)
178 PF02680 DUF211: Uncharacteriz 22.9 69 0.0015 17.6 1.5 23 69-91 51-73 (95)
179 PRK15228 fimbrial protein SefA 22.8 1.5E+02 0.0033 17.4 2.9 24 43-66 77-110 (165)
180 KOG1556|consensus 22.4 44 0.00096 21.9 0.8 11 42-52 93-103 (309)
181 PHA00691 hypothetical protein 22.4 1.1E+02 0.0024 15.2 2.0 27 54-80 10-37 (68)
182 KOG3988|consensus 22.1 1.1E+02 0.0023 20.8 2.5 31 62-92 66-97 (378)
183 PF08478 POTRA_1: POTRA domain 22.1 17 0.00038 17.8 -0.9 17 75-91 33-49 (69)
184 PF12419 DUF3670: SNF2 Helicas 22.0 99 0.0021 17.9 2.2 25 62-86 93-119 (141)
185 cd00136 PDZ PDZ domain, also c 21.9 1.1E+02 0.0024 14.6 2.7 24 66-89 35-61 (70)
186 KOG2863|consensus 21.6 1.1E+02 0.0023 21.5 2.5 19 58-77 103-121 (456)
187 PF07193 DUF1408: Protein of u 21.3 1.1E+02 0.0023 15.6 1.9 15 53-67 40-54 (75)
188 PF01873 eIF-5_eIF-2B: Domain 21.3 1.8E+02 0.0038 16.8 3.1 30 47-87 59-88 (125)
189 PF13342 Toprim_Crpt: C-termin 20.9 81 0.0018 15.7 1.5 17 71-87 11-27 (62)
190 PF01426 BAH: BAH domain; Int 20.9 1.3E+02 0.0029 16.2 2.6 21 45-65 3-25 (119)
191 PF01611 Filo_glycop: Filoviru 20.9 63 0.0014 21.9 1.3 29 46-75 133-161 (364)
192 TIGR03432 yjhG_yagF probable d 20.9 2.6E+02 0.0056 21.1 4.3 45 42-88 552-596 (640)
193 PRK01973 septum formation inhi 20.8 2.6E+02 0.0056 18.5 4.0 31 40-70 172-211 (271)
194 COG2139 RPL21A Ribosomal prote 20.5 1.2E+02 0.0025 16.8 2.1 30 45-74 33-69 (98)
195 PF09926 DUF2158: Uncharacteri 20.4 67 0.0015 15.5 1.1 14 45-58 1-14 (53)
196 PF10079 DUF2317: Uncharacteri 20.3 3.6E+02 0.0077 19.8 5.0 27 64-90 299-327 (542)
197 cd07970 OBF_DNA_ligase_LigC Th 20.1 1.1E+02 0.0024 17.3 2.1 16 50-65 22-37 (122)
No 1
>KOG1176|consensus
Probab=99.95 E-value=2.7e-28 Score=165.95 Aligned_cols=82 Identities=30% Similarity=0.521 Sum_probs=78.3
Q ss_pred CCCceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHH
Q psy4547 1 MGTPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQA 80 (92)
Q Consensus 1 ~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~ 80 (92)
+++.||||++|+.++.|||++|++|++.|.++ +||+|||+|++|+||+|+|.+|++|+||.+|.+|+|.|
T Consensus 376 ~~~~GEI~vrg~~imkGY~~NpeaT~~~~~~~----------GW~~TGDiGy~D~DG~l~IvdR~KdlIk~~G~qv~P~E 445 (537)
T KOG1176|consen 376 PNQTGEICVRGPQVMKGYLKNPEATKEAFDDD----------GWFHTGDLGYFDEDGYLYIVDRSKDLIKYGGEQVSPAE 445 (537)
T ss_pred CCCceEEEEECcccchhhcCChHHHHhhcccC----------CccccCceEEEcCCCeEEEecchhhheeeCCEEeCHHH
Confidence 57889999999999999999999999999776 69999999999999999999999999999999999999
Q ss_pred HHHHHhhCCCCC
Q psy4547 81 IEVALRDYPVSR 92 (92)
Q Consensus 81 iE~~l~~~~~V~ 92 (92)
||++|.+||.|.
T Consensus 446 iE~vL~~hP~V~ 457 (537)
T KOG1176|consen 446 IEAVLLTHPDVL 457 (537)
T ss_pred HHHHHHhCCCcc
Confidence 999999999984
No 2
>PLN02614 long-chain acyl-CoA synthetase
Probab=99.93 E-value=3e-26 Score=159.50 Aligned_cols=80 Identities=30% Similarity=0.469 Sum_probs=74.8
Q ss_pred CCceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEE-ccEEechHH
Q psy4547 2 GTPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKI-RGYTIELQA 80 (92)
Q Consensus 2 g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~-~G~~v~~~~ 80 (92)
|+.|||+|+||.++.|||++++.+.+.|. + +||+|||+|++|+||+|+|+||++|+||+ +|++|+|.+
T Consensus 466 g~~GEl~vrGp~v~~GY~~~pe~T~~~f~-d----------Gw~~TGDlg~~d~dG~l~i~gR~kd~ik~~~G~~V~p~e 534 (666)
T PLN02614 466 TPRGEICIRGKTLFSGYYKREDLTKEVLI-D----------GWLHTGDVGEWQPNGSMKIIDRKKNIFKLSQGEYVAVEN 534 (666)
T ss_pred CCCceEEEcCCcccccccCCHHHhhhhhc-c----------CCcccceEEEEcCCCCEEEEEcchhceecCCCeeecHHH
Confidence 67899999999999999999998888874 2 69999999999999999999999999997 799999999
Q ss_pred HHHHHhhCCCCC
Q psy4547 81 IEVALRDYPVSR 92 (92)
Q Consensus 81 iE~~l~~~~~V~ 92 (92)
||++|.+||.|+
T Consensus 535 IE~~l~~~p~V~ 546 (666)
T PLN02614 535 IENIYGEVQAVD 546 (666)
T ss_pred HHHHHhcCCCee
Confidence 999999999884
No 3
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.92 E-value=3.7e-25 Score=150.93 Aligned_cols=81 Identities=32% Similarity=0.577 Sum_probs=75.5
Q ss_pred CCceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHHH
Q psy4547 2 GTPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQAI 81 (92)
Q Consensus 2 g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~i 81 (92)
|++|||+++||+++.|||++|+.+...|... +||+|||++++|++|+++|.||.+|+|+++|.+|+|.||
T Consensus 370 g~vGei~irgp~v~~GY~~~pe~t~~~f~~~----------gW~~TGDlg~~d~~G~l~i~gR~kd~I~~gG~ni~p~ei 439 (534)
T COG0318 370 GEVGEIWVRGPNVMKGYWNRPEATAEAFDED----------GWLRTGDLGYVDEDGYLYIVGRLKDLIISGGENIYPEEI 439 (534)
T ss_pred CCceEEEEECchhhhhhcCChHHHHHhhccC----------CeeeecceEEEcCCccEEEEeccceEEEeCCeEECHHHH
Confidence 6689999999999999999999888877652 699999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCC
Q psy4547 82 EVALRDYPVSR 92 (92)
Q Consensus 82 E~~l~~~~~V~ 92 (92)
|.++.+||.|.
T Consensus 440 E~~l~~~~~V~ 450 (534)
T COG0318 440 EAVLAEHPAVA 450 (534)
T ss_pred HHHHHhCCCcc
Confidence 99999999874
No 4
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=99.92 E-value=2.6e-25 Score=154.64 Aligned_cols=79 Identities=28% Similarity=0.508 Sum_probs=73.9
Q ss_pred CceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEE-ccEEechHHH
Q psy4547 3 TPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKI-RGYTIELQAI 81 (92)
Q Consensus 3 ~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~-~G~~v~~~~i 81 (92)
..|||+++||.++.|||++++.+.+.|. + +||+|||++++|++|+|+|.||++|+||+ +|++|+|.+|
T Consensus 464 ~~GEi~vrGp~v~~GY~~~pe~T~~~f~-d----------Gw~~TGDlg~~d~dG~l~i~GR~kd~Ik~~~G~~I~p~eI 532 (660)
T PLN02861 464 PRGEICLRGNTLFSGYHKRQDLTEEVLI-D----------GWFHTGDIGEWQPNGAMKIIDRKKNIFKLSQGEYVAVENL 532 (660)
T ss_pred CceeEEEcCCcccccccCCHHHHHhhhh-c----------cCcccCceEEECCCCcEEEEeccccceEcCCCeEEcHHHH
Confidence 4799999999999999999999888884 2 69999999999999999999999999997 7999999999
Q ss_pred HHHHhhCCCCC
Q psy4547 82 EVALRDYPVSR 92 (92)
Q Consensus 82 E~~l~~~~~V~ 92 (92)
|++|.+||.|.
T Consensus 533 E~~l~~~p~V~ 543 (660)
T PLN02861 533 ENTYSRCPLIA 543 (660)
T ss_pred HHHHhcCCCee
Confidence 99999999884
No 5
>PLN02736 long-chain acyl-CoA synthetase
Probab=99.92 E-value=3.2e-25 Score=153.79 Aligned_cols=80 Identities=24% Similarity=0.377 Sum_probs=74.1
Q ss_pred CceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEE-ccEEechHHH
Q psy4547 3 TPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKI-RGYTIELQAI 81 (92)
Q Consensus 3 ~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~-~G~~v~~~~i 81 (92)
..|||+++||.++.|||++++.+.+.|..+ +||+|||++++|+||+|+|+||.+|+||+ +|++|+|.+|
T Consensus 457 ~~GEl~vrgp~v~~GY~~~~~~t~~~~~~d----------gw~~TGDlg~~d~dG~l~i~GR~kd~ik~~~G~~V~p~eI 526 (651)
T PLN02736 457 PRGEICVRGPIIFKGYYKDEVQTREVIDED----------GWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYIAPEKI 526 (651)
T ss_pred CCceEEecCCccccccccCHHHHHhhhccC----------CCeeccceEEEcCCCcEEEEEechhheEcCCCcEechHHH
Confidence 469999999999999999999888877544 69999999999999999999999999998 6999999999
Q ss_pred HHHHhhCCCCC
Q psy4547 82 EVALRDYPVSR 92 (92)
Q Consensus 82 E~~l~~~~~V~ 92 (92)
|++|.+||.|.
T Consensus 527 E~~l~~~p~V~ 537 (651)
T PLN02736 527 ENVYAKCKFVA 537 (651)
T ss_pred HHHHhcCCCee
Confidence 99999999884
No 6
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=99.91 E-value=1e-24 Score=160.14 Aligned_cols=92 Identities=42% Similarity=0.637 Sum_probs=79.6
Q ss_pred CCCceeEEEecCcccccccCCCcccccccccCCcccc------------------cccceeEEEcCCeEEEecCCcEEEe
Q psy4547 1 MGTPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLR------------------KTCGVRLYNTGDWGYALGDGTFEVI 62 (92)
Q Consensus 1 ~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~tGD~~~~~~~g~l~~~ 62 (92)
+|++|||+|+||.+++|||++|+.+.+.|...++... .....+||+|||++++++||.++|+
T Consensus 618 ~G~~GEL~i~G~~v~~GY~~~p~~t~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~TGDlg~~~~dG~l~~~ 697 (1389)
T TIGR03443 618 VGEVGEIYVRAGGLAEGYLGLPELNAEKFVNNWFVDPSHWIDLDKENNKPEREFWLGPRDRLYRTGDLGRYLPDGNVECC 697 (1389)
T ss_pred CCCceEEEecccccchhcCCChhHhhhhccCCcccCcccccccccccccccccccCCCccceeecCCceeEcCCCCEEEe
Confidence 4789999999999999999999999998875432100 0112479999999999999999999
Q ss_pred cccCCeEEEccEEechHHHHHHHhhCCCCC
Q psy4547 63 GRSDTMVKIRGYTIELQAIEVALRDYPVSR 92 (92)
Q Consensus 63 gR~~~~i~~~G~~v~~~~iE~~l~~~~~V~ 92 (92)
||.||+||++|++|+|.|||.+|.+||.|+
T Consensus 698 GR~dd~Iki~G~rI~p~eIE~~l~~~p~V~ 727 (1389)
T TIGR03443 698 GRADDQVKIRGFRIELGEIDTHLSQHPLVR 727 (1389)
T ss_pred cccCCEEEeCcEEecHHHHHHHHHhCcchh
Confidence 999999999999999999999999999884
No 7
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=99.91 E-value=4.2e-25 Score=154.35 Aligned_cols=81 Identities=28% Similarity=0.478 Sum_probs=75.6
Q ss_pred CCceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEE-EccEEechHH
Q psy4547 2 GTPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVK-IRGYTIELQA 80 (92)
Q Consensus 2 g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~-~~G~~v~~~~ 80 (92)
+..|||+|+||+++.|||++++.+.+.|..+ +||+|||++++++||.|+|+||++++|| .+|++|+|.+
T Consensus 505 ~~~GEL~vrG~~v~~GY~~~pe~T~~~f~~d----------Gw~~TGDig~~d~dG~l~i~GR~kd~ik~~~G~~I~p~e 574 (700)
T PTZ00216 505 EPRGEILLRGPFLFKGYYKQEELTREVLDED----------GWFHTGDVGSIAANGTLRIIGRVKALAKNCLGEYIALEA 574 (700)
T ss_pred CCCceEEEcCCcccchhcCChhHhhhhcccc----------CCeeccceEEEcCCCcEEEEEehHhheecCCCceeccHH
Confidence 4579999999999999999999999888655 6999999999999999999999999999 7999999999
Q ss_pred HHHHHhhCCCCC
Q psy4547 81 IEVALRDYPVSR 92 (92)
Q Consensus 81 iE~~l~~~~~V~ 92 (92)
||++|.+||.|.
T Consensus 575 IE~~l~~~p~V~ 586 (700)
T PTZ00216 575 LEALYGQNELVV 586 (700)
T ss_pred HHHHHhcCcCcc
Confidence 999999999884
No 8
>PRK09274 peptide synthase; Provisional
Probab=99.91 E-value=2e-24 Score=146.95 Aligned_cols=85 Identities=27% Similarity=0.429 Sum_probs=75.1
Q ss_pred CCceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHHH
Q psy4547 2 GTPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQAI 81 (92)
Q Consensus 2 g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~i 81 (92)
|++|||+++||.++.|||++++.+...|..+.. +..||+|||++++|++|.|+|+||.+|+||++|.+|+|.+|
T Consensus 385 g~~Gel~v~g~~~~~GY~~~~~~t~~~~~~~~~------g~~w~~TGDlg~~d~dG~l~~~GR~~d~i~~~G~~v~p~eI 458 (552)
T PRK09274 385 GEIGEIVVAGPMVTRSYYNRPEATRLAKIPDGQ------GDVWHRMGDLGYLDAQGRLWFCGRKAHRVETAGGTLYTIPC 458 (552)
T ss_pred CCeeEEEEecCcccccccCChHHhhhhhcccCC------CCcEEEcCCEEEEccCCcEEEEeccCCeEEECCEEECcHHH
Confidence 678999999999999999999877766543221 11499999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCC
Q psy4547 82 EVALRDYPVSR 92 (92)
Q Consensus 82 E~~l~~~~~V~ 92 (92)
|++|.+||.|+
T Consensus 459 E~~l~~~p~V~ 469 (552)
T PRK09274 459 ERIFNTHPGVK 469 (552)
T ss_pred HHHHHhCcccc
Confidence 99999999884
No 9
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=99.91 E-value=4e-24 Score=145.69 Aligned_cols=83 Identities=30% Similarity=0.397 Sum_probs=72.1
Q ss_pred CCCceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHH
Q psy4547 1 MGTPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQA 80 (92)
Q Consensus 1 ~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~ 80 (92)
+|+.|||+++|+.++.|||++++.+. +... .+.+||+|||++++|++|+++|.||.+++||++|.+|+|.|
T Consensus 377 ~g~~Gel~v~g~~~~~GY~~~~~~~~--~~~~-------~~~~w~~TGD~g~~d~~G~l~~~GR~~d~ik~~G~~v~p~e 447 (539)
T PRK06334 377 SGETGLVLTRGTSLFSGYLGEDFGQG--FVEL-------GGETWYVTGDLGYVDRHGELFLKGRLSRFVKIGAEMVSLEA 447 (539)
T ss_pred CCceEEEEEecCcccccccCCccccc--ceee-------CCceeEECCCEEEECCCCeEEEEeccCCeEEECCEEECHHH
Confidence 47889999999999999999887432 2110 12269999999999999999999999999999999999999
Q ss_pred HHHHHhhCCCCC
Q psy4547 81 IEVALRDYPVSR 92 (92)
Q Consensus 81 iE~~l~~~~~V~ 92 (92)
||++|.+||.|+
T Consensus 448 IE~~l~~~~~v~ 459 (539)
T PRK06334 448 LESILMEGFGQN 459 (539)
T ss_pred HHHHHHHccCCc
Confidence 999999999874
No 10
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=99.91 E-value=1.4e-24 Score=151.84 Aligned_cols=84 Identities=32% Similarity=0.583 Sum_probs=74.9
Q ss_pred CceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEE-ccEEechHHH
Q psy4547 3 TPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKI-RGYTIELQAI 81 (92)
Q Consensus 3 ~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~-~G~~v~~~~i 81 (92)
..|||+++||.++.|||++++.+.+.|..+. .+.+||+|||+|++|++|+|+|.||++|+||+ +|++|+|.+|
T Consensus 501 p~GEi~vrGp~v~~GY~~~pe~T~~~f~~d~------~G~~W~~TGDig~~d~dG~l~i~gR~kd~ik~~~Ge~I~p~eI 574 (696)
T PLN02387 501 PRGEIVIGGPSVTLGYFKNQEKTDEVYKVDE------RGMRWFYTGDIGQFHPDGCLEIIDRKKDIVKLQHGEYVSLGKV 574 (696)
T ss_pred CCceEEeccCcccchhcCCHHHHhhhhcccc------CCCceeecCceEEECCCCcEEEEEcccceEECCCCeEEchHHH
Confidence 4699999999999999999999888874321 12259999999999999999999999999998 6999999999
Q ss_pred HHHHhhCCCCC
Q psy4547 82 EVALRDYPVSR 92 (92)
Q Consensus 82 E~~l~~~~~V~ 92 (92)
|++|.+||.|.
T Consensus 575 E~~l~~~p~V~ 585 (696)
T PLN02387 575 EAALSVSPYVD 585 (696)
T ss_pred HHHHhcCCCee
Confidence 99999999884
No 11
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=99.91 E-value=3.1e-24 Score=146.64 Aligned_cols=82 Identities=24% Similarity=0.393 Sum_probs=75.8
Q ss_pred CCCceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHH
Q psy4547 1 MGTPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQA 80 (92)
Q Consensus 1 ~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~ 80 (92)
+|++|||+++||.++.|||++++.+...+..+ +||+|||+++++++|+++|.||.+|+||++|.+|+|.+
T Consensus 382 ~g~~Gel~v~g~~~~~GY~~~~~~t~~~~~~~----------g~~~TGDl~~~d~dG~l~~~GR~~d~i~~~G~~v~p~e 451 (563)
T PLN02860 382 SSRVGRILTRGPHVMLGYWGQNSETASVLSND----------GWLDTGDIGWIDKAGNLWLIGRSNDRIKTGGENVYPEE 451 (563)
T ss_pred CCceeEEEEecCcccccccCCccccchhccCC----------CeEEccceEEEcCCCCEEEeecccceeEECCEEccHHH
Confidence 46889999999999999999998877766544 69999999999999999999999999999999999999
Q ss_pred HHHHHhhCCCCC
Q psy4547 81 IEVALRDYPVSR 92 (92)
Q Consensus 81 iE~~l~~~~~V~ 92 (92)
||++|.+||.|+
T Consensus 452 IE~~l~~~p~V~ 463 (563)
T PLN02860 452 VEAVLSQHPGVA 463 (563)
T ss_pred HHHHHHhCCCcc
Confidence 999999999884
No 12
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=99.91 E-value=1.9e-24 Score=152.12 Aligned_cols=80 Identities=21% Similarity=0.360 Sum_probs=75.0
Q ss_pred CceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEE-ccEEechHHH
Q psy4547 3 TPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKI-RGYTIELQAI 81 (92)
Q Consensus 3 ~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~-~G~~v~~~~i 81 (92)
..|||+++||.++.|||++|+.|++.|..+ +||+|||++++|++|+|+|+||++++||+ +|++|+|.+|
T Consensus 540 ~~GEl~vrGp~v~~GY~~~pe~T~~~f~~d----------GW~~TGDig~~d~dG~l~i~gR~kdlIkls~Ge~I~p~eI 609 (746)
T PTZ00342 540 PKGELLIKSDSIFSGYFLEKEQTKNAFTED----------GYFKTGDIVQINKNGSLTFLDRSKGLVKLSQGEYIETDML 609 (746)
T ss_pred CceEEEEecCcccccccCChhhhhhhcCcC----------CcccCCcEEEECCCCeEEEEccCCCeEEeCCCEEEchHHH
Confidence 469999999999999999999999888654 69999999999999999999999999996 7999999999
Q ss_pred HHHHhhCCCCC
Q psy4547 82 EVALRDYPVSR 92 (92)
Q Consensus 82 E~~l~~~~~V~ 92 (92)
|++|.+||.|.
T Consensus 610 E~~l~~~p~V~ 620 (746)
T PTZ00342 610 NNLYSQISFIN 620 (746)
T ss_pred HHHHhcCCCcc
Confidence 99999999984
No 13
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.91 E-value=1.5e-24 Score=149.80 Aligned_cols=91 Identities=24% Similarity=0.406 Sum_probs=75.3
Q ss_pred CCCceeEEEecCcccccccCCCcccccccccCCccc-------ccccceeEEEcCCeEEEecCCcEEEecccCCeEEEcc
Q psy4547 1 MGTPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHL-------RKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRG 73 (92)
Q Consensus 1 ~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G 73 (92)
+|++|||+++||+++.|||++++.+.+.|....... ....+.+||+|||+++++ +|+|+|+||.+|+||++|
T Consensus 415 ~ge~GEl~v~gp~v~~GY~~~~~~t~~~f~~~~~~~~~~~~~~~~~~~~gw~~TGDlg~~~-dG~l~i~GR~~d~Ik~~G 493 (631)
T PRK07769 415 DGQIGEIWLHGNNIGTGYWGKPEETAATFQNILKSRLSESHAEGAPDDALWVRTGDYGVYF-DGELYITGRVKDLVIIDG 493 (631)
T ss_pred CCCEEEEEecCCCccccccCChhHHHHHHhhhcccccccccccCcccCCCeeeccccccEE-CCEEEEEcccccEEEECC
Confidence 378899999999999999999998888875321000 001123799999999995 999999999999999999
Q ss_pred EEechHHHHHHHhh-CCCCC
Q psy4547 74 YTIELQAIEVALRD-YPVSR 92 (92)
Q Consensus 74 ~~v~~~~iE~~l~~-~~~V~ 92 (92)
.+|+|.|||++|.+ ||.|+
T Consensus 494 ~~V~p~eIE~~l~~~~p~v~ 513 (631)
T PRK07769 494 RNHYPQDLEYTAQEATKALR 513 (631)
T ss_pred eeeCHHHHHHHHHhcccccc
Confidence 99999999999996 88874
No 14
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=99.90 E-value=5.1e-24 Score=147.93 Aligned_cols=83 Identities=27% Similarity=0.515 Sum_probs=73.8
Q ss_pred CCCceeEEEecC---cccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEec
Q psy4547 1 MGTPGDIYIGGP---TLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIE 77 (92)
Q Consensus 1 ~g~~Gel~v~~~---~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~ 77 (92)
+|+.|||++++| +++.|||++++.+.+.|.... +||+|||++++|++|+++|+||+||+||++|++|+
T Consensus 456 ~ge~GEl~v~~p~~p~~~~gy~~~~~~~~~~f~~~~---------g~~~TGDlg~~d~dG~l~i~GR~dd~i~~~G~rI~ 526 (647)
T PTZ00237 456 VNEIGEVAFKLPMPPSFATTFYKNDEKFKQLFSKFP---------GYYNSGDLGFKDENGYYTIVSRSDDQIKISGNKVQ 526 (647)
T ss_pred CCCceEEEEeccCCchhhCceeCCHHHHHHHHhCCC---------CEEECCcEEEECCCCeEEEEeccCCEEEECCEEeC
Confidence 378899999985 789999999987766553211 69999999999999999999999999999999999
Q ss_pred hHHHHHHHhhCCCCC
Q psy4547 78 LQAIEVALRDYPVSR 92 (92)
Q Consensus 78 ~~~iE~~l~~~~~V~ 92 (92)
|.|||++|.+||.|+
T Consensus 527 p~eIE~~l~~~p~V~ 541 (647)
T PTZ00237 527 LNTIETSILKHPLVL 541 (647)
T ss_pred HHHHHHHHHhCCCce
Confidence 999999999999884
No 15
>PLN02574 4-coumarate--CoA ligase-like
Probab=99.90 E-value=8.4e-24 Score=144.42 Aligned_cols=82 Identities=28% Similarity=0.495 Sum_probs=75.7
Q ss_pred CCCceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHH
Q psy4547 1 MGTPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQA 80 (92)
Q Consensus 1 ~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~ 80 (92)
+|+.|||+++||.++.|||++++.+.+.|..+ +||+|||+++++++|.+++.||++|+||++|.+|++.+
T Consensus 398 ~g~~Gei~v~g~~~~~GY~~~~~~t~~~~~~~----------g~~~TGDlg~~~~~G~l~i~GR~~d~i~~~G~~v~~~e 467 (560)
T PLN02574 398 PGNCGELWIQGPGVMKGYLNNPKATQSTIDKD----------GWLRTGDIAYFDEDGYLYIVDRLKEIIKYKGFQIAPAD 467 (560)
T ss_pred CCCCeEEEEECcchhhhhcCChhHhhhhccCC----------CCcccceEEEEECCCeEEEEecchhheEECCEEECHHH
Confidence 37889999999999999999998887776543 69999999999999999999999999999999999999
Q ss_pred HHHHHhhCCCCC
Q psy4547 81 IEVALRDYPVSR 92 (92)
Q Consensus 81 iE~~l~~~~~V~ 92 (92)
||++|.+||.|.
T Consensus 468 iE~~l~~~~~V~ 479 (560)
T PLN02574 468 LEAVLISHPEII 479 (560)
T ss_pred HHHHHHhCCCcc
Confidence 999999999874
No 16
>PRK12467 peptide synthase; Provisional
Probab=99.90 E-value=6e-24 Score=165.72 Aligned_cols=89 Identities=47% Similarity=0.763 Sum_probs=81.8
Q ss_pred CCCceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHH
Q psy4547 1 MGTPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQA 80 (92)
Q Consensus 1 ~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~ 80 (92)
+|++|||+|+|+.+++|||++++.|.+.|..++... .+.+||+|||++++++||.|+|+||+|++||++|.+|+|.|
T Consensus 3432 ~G~~GEL~i~G~~v~~GY~~~~~~T~~~F~~~p~~~---~g~r~yrTGDl~~~~~dG~l~~~GR~d~~iki~G~rIe~~E 3508 (3956)
T PRK12467 3432 VGVAGELYIGGVGLARGYHQRPSLTAERFVADPFSG---SGGRLYRTGDLARYRADGVIEYLGRIDHQVKIRGFRIELGE 3508 (3956)
T ss_pred CCCCceEEEcchhhhhhccCCcccchhhccCCCCCC---CCceeeccchhheecCCCcEEEeccccceEeeceEeecHHH
Confidence 588999999999999999999999999998876422 24479999999999999999999999999999999999999
Q ss_pred HHHHHhhCCCCC
Q psy4547 81 IEVALRDYPVSR 92 (92)
Q Consensus 81 iE~~l~~~~~V~ 92 (92)
||++|.+||+|+
T Consensus 3509 IE~~l~~~p~V~ 3520 (3956)
T PRK12467 3509 IEARLLQHPSVR 3520 (3956)
T ss_pred HHHHHhhCcccc
Confidence 999999999985
No 17
>KOG1177|consensus
Probab=99.90 E-value=9.8e-24 Score=140.46 Aligned_cols=81 Identities=30% Similarity=0.487 Sum_probs=75.7
Q ss_pred CCceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHHH
Q psy4547 2 GTPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQAI 81 (92)
Q Consensus 2 g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~i 81 (92)
|..||||++|++.|.+||++++.+.+....+ +||.|||++.+|++|.++++||.+|+|+.+|++|+|.||
T Consensus 430 ~~~Gel~iRGY~tMl~Ywg~~~kT~eti~~d----------rW~~TGDi~~m~enG~i~iVGRskdmI~rGGENVyP~El 499 (596)
T KOG1177|consen 430 GTKGELLIRGYSTMLGYWGEEEKTKETIGND----------RWYDTGDIAVMDENGTIEIVGRSKDMIIRGGENVYPTEL 499 (596)
T ss_pred CCCceEEEEechhheeecCCcccchhhcccc----------cceecCceEEEcCCCcEEEEEcccCeEEeCCcccChHHH
Confidence 6789999999999999999998887776655 699999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCC
Q psy4547 82 EVALRDYPVSR 92 (92)
Q Consensus 82 E~~l~~~~~V~ 92 (92)
|+.|-+||.|.
T Consensus 500 E~fL~~hp~V~ 510 (596)
T KOG1177|consen 500 EDFLNKHPLVK 510 (596)
T ss_pred HHHHhhCCCee
Confidence 99999999873
No 18
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=99.90 E-value=4.9e-24 Score=146.74 Aligned_cols=81 Identities=28% Similarity=0.549 Sum_probs=76.9
Q ss_pred CCceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEE-ccEEechHH
Q psy4547 2 GTPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKI-RGYTIELQA 80 (92)
Q Consensus 2 g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~-~G~~v~~~~ 80 (92)
.+.|||+|+||.+|.|||++|+.|++.|..+ +||+|||+|.+|++|+|.++||++++|+. +|.+|.|+.
T Consensus 418 ~d~GEilVRG~~Vm~GYyk~pe~Taeaf~~D----------GWf~TGDlg~~d~~g~L~i~gRkK~~i~l~~GknIaP~~ 487 (613)
T COG1022 418 ADDGEILVRGPNVMKGYYKNPEATAEAFTED----------GWFRTGDLGELDEDGYLVITGRKKELIKLSNGKNIAPEP 487 (613)
T ss_pred ccCceEEEecchhcchhcCChHHHhhhcccc----------CCcccCceeEEcCCCcEEEeecccceEECCCCcccChHH
Confidence 4579999999999999999999999999876 79999999999999999999999999999 999999999
Q ss_pred HHHHHhhCCCCC
Q psy4547 81 IEVALRDYPVSR 92 (92)
Q Consensus 81 iE~~l~~~~~V~ 92 (92)
||+.+.++|.|.
T Consensus 488 IE~~l~~~~~I~ 499 (613)
T COG1022 488 IESKLAKSPLIE 499 (613)
T ss_pred HHHHHhcCCCee
Confidence 999999999873
No 19
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.89 E-value=3.3e-23 Score=151.30 Aligned_cols=88 Identities=48% Similarity=0.762 Sum_probs=80.6
Q ss_pred CCCceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHH
Q psy4547 1 MGTPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQA 80 (92)
Q Consensus 1 ~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~ 80 (92)
+|++|||+++|+.+++||+++++.+.+.|..+++. .+.+||+|||+++++++|.++|+||+|++||++|++|++.|
T Consensus 799 ~g~~Gel~i~g~~~~~GY~~~~~~t~~~f~~~~~~----~~~~~y~TGDl~~~~~~G~l~~~GR~d~~ik~~G~ri~~~e 874 (1296)
T PRK10252 799 PGVAGDLYLTGIQLAQGYLGRPDLTASRFIADPFA----PGERMYRTGDVARWLDDGAVEYLGRSDDQLKIRGQRIELGE 874 (1296)
T ss_pred CCCceEEEecccccchhhCCCcccchhhcccCCCC----CCCEEEecCceEEEcCCCcEEEecccCCeEEEeeEEecHHH
Confidence 47889999999999999999999999999876542 23479999999999999999999999999999999999999
Q ss_pred HHHHHhhCCCCC
Q psy4547 81 IEVALRDYPVSR 92 (92)
Q Consensus 81 iE~~l~~~~~V~ 92 (92)
||++|.+||.|+
T Consensus 875 IE~~l~~~~~v~ 886 (1296)
T PRK10252 875 IDRAMQALPDVE 886 (1296)
T ss_pred HHHHHHhCcccc
Confidence 999999999884
No 20
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=99.89 E-value=1.3e-23 Score=142.83 Aligned_cols=79 Identities=34% Similarity=0.579 Sum_probs=72.1
Q ss_pred CCceeEEEecC--cccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechH
Q psy4547 2 GTPGDIYIGGP--TLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQ 79 (92)
Q Consensus 2 g~~Gel~v~~~--~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~ 79 (92)
|+ |+|+++.| +++++||++++...+.+... ||.|||.+++|+||+++|+||+||+||++|++|+|.
T Consensus 365 ~~-G~Lvi~~~~p~~~~~~w~d~er~~~~y~~~-----------~y~tGD~~~~DedGy~~i~GR~DDvI~vsG~Rig~~ 432 (528)
T COG0365 365 GV-GELVVRLPWPGMALTYWNDPERYKEAYFGR-----------WYRTGDWAERDEDGYFWLHGRSDDVIKVSGKRIGPL 432 (528)
T ss_pred Cc-eEEEEeCCCchhhhhhhCCHHHHHHHHhhc-----------eeecCceeEEccCCCEEEEeeccceEeccCeeccHH
Confidence 56 99999985 89999999998766666442 999999999999999999999999999999999999
Q ss_pred HHHHHHhhCCCCC
Q psy4547 80 AIEVALRDYPVSR 92 (92)
Q Consensus 80 ~iE~~l~~~~~V~ 92 (92)
|||++|.+||+|.
T Consensus 433 EvE~~l~~hP~Va 445 (528)
T COG0365 433 EIESVLLAHPAVA 445 (528)
T ss_pred HHHHHHHhCccee
Confidence 9999999999984
No 21
>PRK12316 peptide synthase; Provisional
Probab=99.89 E-value=1.8e-23 Score=164.92 Aligned_cols=89 Identities=48% Similarity=0.803 Sum_probs=81.0
Q ss_pred CCCceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHH
Q psy4547 1 MGTPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQA 80 (92)
Q Consensus 1 ~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~ 80 (92)
+|++|||+|+||++++|||++++.+.+.|..+++.. .+.+||+|||++++++||.|+|+||+|++||++|++|+|.|
T Consensus 2342 ~g~~GEl~i~G~~v~~GY~~~p~~T~~~f~~~~~~~---~~~~~yrTGDl~~~~~dG~l~~~GR~d~~iki~G~rie~~e 2418 (5163)
T PRK12316 2342 PGMAGELYLGGEGLARGYLNRPGLTAERFVPDPFSA---SGERLYRTGDLARYRADGVVEYLGRIDHQVKIRGFRIELGE 2418 (5163)
T ss_pred CCCeeEEEecchhhcccccCChhhhhhhccCCCCCC---CCCeeEecccEEEEcCCCcEEEecCCCCeEEEcCccCChHH
Confidence 478999999999999999999999999998765422 13479999999999999999999999999999999999999
Q ss_pred HHHHHhhCCCCC
Q psy4547 81 IEVALRDYPVSR 92 (92)
Q Consensus 81 iE~~l~~~~~V~ 92 (92)
||++|.+||+|+
T Consensus 2419 IE~~l~~~~~v~ 2430 (5163)
T PRK12316 2419 IEARLQAHPAVR 2430 (5163)
T ss_pred HHHHHhhCcccc
Confidence 999999999884
No 22
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=99.89 E-value=3.1e-23 Score=143.11 Aligned_cols=84 Identities=24% Similarity=0.266 Sum_probs=73.8
Q ss_pred CCCceeEEEec--CcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEech
Q psy4547 1 MGTPGDIYIGG--PTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIEL 78 (92)
Q Consensus 1 ~g~~Gel~v~~--~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~ 78 (92)
+|+.|||++++ |+++.|||++++.+...+.... .+||+|||++++|++|+++|+||+||+||++|++|+|
T Consensus 439 ~g~~GeL~v~~p~p~~~~gy~~~~~~~~~~~~~~~--------~g~~~TGDl~~~d~dG~l~i~GR~dd~i~~~G~ri~p 510 (625)
T TIGR02188 439 PGEGGYLVIKQPWPGMLRTIYGDHERFVDTYFSPF--------PGYYFTGDGARRDKDGYIWITGRVDDVINVSGHRLGT 510 (625)
T ss_pred CCCeEEEEEccCCCcccccccCChHHHHHHHhccC--------CCEEECCceEEEcCCCcEEEEecccCEEEeCCEEECH
Confidence 37889999999 6899999999876655553321 1599999999999999999999999999999999999
Q ss_pred HHHHHHHhhCCCCC
Q psy4547 79 QAIEVALRDYPVSR 92 (92)
Q Consensus 79 ~~iE~~l~~~~~V~ 92 (92)
.+||++|.+||.|+
T Consensus 511 ~eIE~~l~~~p~V~ 524 (625)
T TIGR02188 511 AEIESALVSHPAVA 524 (625)
T ss_pred HHHHHHHHhCCCcc
Confidence 99999999999874
No 23
>PRK05691 peptide synthase; Validated
Probab=99.89 E-value=3.6e-23 Score=162.08 Aligned_cols=89 Identities=38% Similarity=0.655 Sum_probs=82.1
Q ss_pred CCCceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHH
Q psy4547 1 MGTPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQA 80 (92)
Q Consensus 1 ~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~ 80 (92)
+|.+|||+|+|+.+++|||++++.|++.|..+++.. .+.+||+|||++++++||.+.|+||+|++||++|++|.+.|
T Consensus 4063 ~g~~GEL~i~G~~v~~GY~~~~~~t~~~f~~~p~~~---~~~~~yrTGDl~~~~~dG~l~~~GR~d~qvki~G~riel~e 4139 (4334)
T PRK05691 4063 LGAVGELCVAGTGVGRGYVGDPLRTALAFVPHPFGA---PGERLYRTGDLARRRSDGVLEYVGRIDHQVKIRGYRIELGE 4139 (4334)
T ss_pred CCCceEEEEecccccccccCCcccchhhcccCCCCC---CCceeeccCcceeecCCCcEEEecccCCcEEeceEEecHHH
Confidence 478999999999999999999999999998877532 24479999999999999999999999999999999999999
Q ss_pred HHHHHhhCCCCC
Q psy4547 81 IEVALRDYPVSR 92 (92)
Q Consensus 81 iE~~l~~~~~V~ 92 (92)
||++|.++|+|+
T Consensus 4140 IE~~l~~~~~v~ 4151 (4334)
T PRK05691 4140 IEARLHEQAEVR 4151 (4334)
T ss_pred HHHHHHhCCCcc
Confidence 999999999884
No 24
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=99.89 E-value=2.3e-23 Score=143.65 Aligned_cols=91 Identities=27% Similarity=0.444 Sum_probs=74.5
Q ss_pred CCCceeEEEecCcccccccCCCcccccccccCCccc--------ccccceeEEEcCCeEEEecCCcEEEecccCCeEEEc
Q psy4547 1 MGTPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHL--------RKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIR 72 (92)
Q Consensus 1 ~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~ 72 (92)
+|+.|||+++||.++.|||++++.+.+.|....... ....+.+||+|||+++++ +|+|+|+||++|+||++
T Consensus 426 ~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~~~~~~~g~~~~~~~~~~~w~~TGDlg~~~-dG~l~i~GR~~d~I~~~ 504 (612)
T PRK12476 426 DGEVGEIWLHGDNIGRGYWGRPEETERTFGAKLQSRLAEGSHADGAADDGTWLRTGDLGVYL-DGELYITGRIADLIVID 504 (612)
T ss_pred CCCEEEEEEcCCcccccccCChHHHHHHHhhhhccccccccccccccCCCCeeeccccceeE-CCEEEEEeccCcEEEEC
Confidence 478899999999999999999998888775311000 001123699999999985 99999999999999999
Q ss_pred cEEechHHHHHHHhh-CCCCC
Q psy4547 73 GYTIELQAIEVALRD-YPVSR 92 (92)
Q Consensus 73 G~~v~~~~iE~~l~~-~~~V~ 92 (92)
|.+|+|.|||++|.+ ||.|+
T Consensus 505 G~~I~p~eIE~~l~~~~p~V~ 525 (612)
T PRK12476 505 GRNHYPQDIEATVAEASPMVR 525 (612)
T ss_pred CcccCHHHHHHHHHHhccccc
Confidence 999999999999985 78873
No 25
>PLN02654 acetate-CoA ligase
Probab=99.89 E-value=3.3e-23 Score=144.26 Aligned_cols=83 Identities=19% Similarity=0.260 Sum_probs=73.0
Q ss_pred CCceeEEEec--CcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechH
Q psy4547 2 GTPGDIYIGG--PTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQ 79 (92)
Q Consensus 2 g~~Gel~v~~--~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~ 79 (92)
++.|||++++ |+++.+||++++.+...+.... .+||+|||++++|+||+++|+||+||+||++|++|+|.
T Consensus 478 ~~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~--------~g~~~TGD~~~~d~dG~l~i~GR~dd~I~~~G~ri~p~ 549 (666)
T PLN02654 478 ECSGYLCVKKSWPGAFRTLYGDHERYETTYFKPF--------AGYYFSGDGCSRDKDGYYWLTGRVDDVINVSGHRIGTA 549 (666)
T ss_pred CCceEEEEcCCCchhhhhhcCChHHHHHhhhhcC--------CCEEEeCceEEECCCCcEEEeeeccCeEEeCCEEECHH
Confidence 4579999998 7899999999987666553321 16999999999999999999999999999999999999
Q ss_pred HHHHHHhhCCCCC
Q psy4547 80 AIEVALRDYPVSR 92 (92)
Q Consensus 80 ~iE~~l~~~~~V~ 92 (92)
|||++|.+||.|.
T Consensus 550 EIE~~l~~~p~V~ 562 (666)
T PLN02654 550 EVESALVSHPQCA 562 (666)
T ss_pred HHHHHHHhCCCee
Confidence 9999999999874
No 26
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=99.89 E-value=5.1e-23 Score=142.36 Aligned_cols=84 Identities=25% Similarity=0.317 Sum_probs=73.4
Q ss_pred CCCceeEEEec--CcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEech
Q psy4547 1 MGTPGDIYIGG--PTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIEL 78 (92)
Q Consensus 1 ~g~~Gel~v~~--~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~ 78 (92)
+|+.|||++++ |+++.|||++++.+.+.+.... .+||+|||+++++++|+++|+||+||+||++|.+|+|
T Consensus 447 ~g~~Gel~v~g~~p~~~~gy~~~~~~~~~~~~~~~--------~g~~~TGDl~~~d~dG~l~~~GR~dd~ik~~G~~v~p 518 (637)
T PRK00174 447 GGEGGNLVIKDPWPGMMRTIYGDHERFVKTYFSTF--------KGMYFTGDGARRDEDGYYWITGRVDDVLNVSGHRLGT 518 (637)
T ss_pred CCCcEEEEEcCCCCcccccccCCHHHHHHhhhcCC--------CCEEECCceEEEcCCCcEEEEEecccEEEeCCEEECH
Confidence 36889999999 6899999999876655443211 1699999999999999999999999999999999999
Q ss_pred HHHHHHHhhCCCCC
Q psy4547 79 QAIEVALRDYPVSR 92 (92)
Q Consensus 79 ~~iE~~l~~~~~V~ 92 (92)
.|||++|.+||.|+
T Consensus 519 ~eIE~~l~~~~~V~ 532 (637)
T PRK00174 519 AEIESALVAHPKVA 532 (637)
T ss_pred HHHHHHHHhCCCcc
Confidence 99999999999884
No 27
>PRK06164 acyl-CoA synthetase; Validated
Probab=99.89 E-value=5.8e-23 Score=139.40 Aligned_cols=82 Identities=33% Similarity=0.586 Sum_probs=75.8
Q ss_pred CCCceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHH
Q psy4547 1 MGTPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQA 80 (92)
Q Consensus 1 ~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~ 80 (92)
.|+.|||+++|+.++.|||++++.+...|..+ +||+|||+++++++|.+++.||.+++||++|.+|+|.+
T Consensus 374 ~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~----------~~~~TGDl~~~~~~g~l~~~GR~~~~i~~~G~~i~p~e 443 (540)
T PRK06164 374 DGESGEIEIRAPSLMRGYLDNPDATARALTDD----------GYFRTGDLGYTRGDGQFVYQTRMGDSLRLGGFLVNPAE 443 (540)
T ss_pred CCCeeEEEEecccccccccCCchhhhhcccCC----------CceecCCeEEEcCCceEEEEeecCCeEEECCEEcCHHH
Confidence 36789999999999999999998888777654 59999999999999999999999999999999999999
Q ss_pred HHHHHhhCCCCC
Q psy4547 81 IEVALRDYPVSR 92 (92)
Q Consensus 81 iE~~l~~~~~V~ 92 (92)
||++|.+||.|.
T Consensus 444 IE~~l~~~~~v~ 455 (540)
T PRK06164 444 IEHALEALPGVA 455 (540)
T ss_pred HHHHHHhCCCce
Confidence 999999999873
No 28
>PRK07529 AMP-binding domain protein; Validated
Probab=99.89 E-value=8.1e-23 Score=141.51 Aligned_cols=81 Identities=33% Similarity=0.484 Sum_probs=71.8
Q ss_pred CCCceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHH
Q psy4547 1 MGTPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQA 80 (92)
Q Consensus 1 ~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~ 80 (92)
+|+.|||+++||.++.||++++. +...|... +||+|||+++++++|+++|.||++|+||++|++|+|.+
T Consensus 414 ~g~~Gel~v~gp~v~~GY~~~~~-~~~~~~~~----------gw~~TGDlg~~d~dG~l~i~GR~~d~i~~~G~~i~p~e 482 (632)
T PRK07529 414 VDEVGVLCIAGPNVFSGYLEAAH-NKGLWLED----------GWLNTGDLGRIDADGYFWLTGRAKDLIIRGGHNIDPAA 482 (632)
T ss_pred CCCceEEEEECCCccccccCCcc-ccccccCC----------CceEcCcEEEEcCCceEEEEecccCEEEeCCEEECHHH
Confidence 47889999999999999998654 44444322 69999999999999999999999999999999999999
Q ss_pred HHHHHhhCCCCC
Q psy4547 81 IEVALRDYPVSR 92 (92)
Q Consensus 81 iE~~l~~~~~V~ 92 (92)
||++|.+||.|.
T Consensus 483 IE~~l~~~p~V~ 494 (632)
T PRK07529 483 IEEALLRHPAVA 494 (632)
T ss_pred HHHHHHhCCCee
Confidence 999999999874
No 29
>PRK12316 peptide synthase; Provisional
Probab=99.89 E-value=5.9e-23 Score=162.09 Aligned_cols=88 Identities=49% Similarity=0.791 Sum_probs=81.5
Q ss_pred CCCceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHH
Q psy4547 1 MGTPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQA 80 (92)
Q Consensus 1 ~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~ 80 (92)
+|++|||+|+|+.+++||+++++.|.+.|..+++ ..+.+||+|||++++++||.|+|+||+|++||++|++|++.|
T Consensus 3386 ~G~~GEl~i~G~~v~~GY~~~~~~t~~~f~~~p~----~~~~~~y~TGDl~~~~~dG~l~~~GR~d~qvKi~G~rIel~e 3461 (5163)
T PRK12316 3386 VGALGELYLGGEGLARGYHNRPGLTAERFVPDPF----VPGERLYRTGDLARYRADGVIEYIGRVDHQVKIRGFRIELGE 3461 (5163)
T ss_pred CCCCceEEecccccchhcCCChhhchhhCCCCCC----CCCCeeEecCceEEECCCCCEEEecccCCeEeeCcEeeChHH
Confidence 4789999999999999999999999999988765 234479999999999999999999999999999999999999
Q ss_pred HHHHHhhCCCCC
Q psy4547 81 IEVALRDYPVSR 92 (92)
Q Consensus 81 iE~~l~~~~~V~ 92 (92)
||++|.+||.|+
T Consensus 3462 IE~~l~~~~~V~ 3473 (5163)
T PRK12316 3462 IEARLLEHPWVR 3473 (5163)
T ss_pred HHHHHHhCCCcc
Confidence 999999999884
No 30
>PLN03102 acyl-activating enzyme; Provisional
Probab=99.89 E-value=5.4e-23 Score=141.15 Aligned_cols=79 Identities=33% Similarity=0.482 Sum_probs=73.3
Q ss_pred CceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHHHH
Q psy4547 3 TPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQAIE 82 (92)
Q Consensus 3 ~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~iE 82 (92)
+.|||+++||.++.|||++++.+...|.. +||+|||++++|++|+++|.||.+|+||++|.+|+|.+||
T Consensus 391 ~~GEl~v~g~~~~~GY~~~~~~t~~~f~~-----------gw~~TGDlg~~d~dG~l~i~GR~~d~i~~~G~~v~p~eIE 459 (579)
T PLN03102 391 TMGEIVIKGSSIMKGYLKNPKATSEAFKH-----------GWLNTGDVGVIHPDGHVEIKDRSKDIIISGGENISSVEVE 459 (579)
T ss_pred CceEEEEECcchhhhhcCChhhhHhhhcc-----------CceecCceEEEcCCCeEEEEeccCcEEEECCEEECHHHHH
Confidence 56999999999999999999887776643 5999999999999999999999999999999999999999
Q ss_pred HHHhhCCCCC
Q psy4547 83 VALRDYPVSR 92 (92)
Q Consensus 83 ~~l~~~~~V~ 92 (92)
++|.+||.|+
T Consensus 460 ~~l~~~p~V~ 469 (579)
T PLN03102 460 NVLYKYPKVL 469 (579)
T ss_pred HHHHhCCCcc
Confidence 9999999874
No 31
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=99.88 E-value=9.4e-23 Score=138.44 Aligned_cols=75 Identities=29% Similarity=0.514 Sum_probs=67.7
Q ss_pred CCceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHHH
Q psy4547 2 GTPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQAI 81 (92)
Q Consensus 2 g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~i 81 (92)
|+.|||+++||+++.|||++++.+ .. +||+|||+++++ +|.|+|+||+||+||++|++|+|.||
T Consensus 370 g~~GEl~v~g~~~~~GY~~~~~~~-----~~----------~~~~TGDl~~~~-~G~l~~~GR~dd~i~~~G~~v~p~eI 433 (525)
T PRK05851 370 REIGEIEIRGASMMSGYLGQAPID-----PD----------DWFPTGDLGYLV-DGGLVVCGRAKELITVAGRNIFPTEI 433 (525)
T ss_pred CCeEEEEEecCchhhccccCCccC-----CC----------CceeccceEEEE-CCEEEEEeecCCEEEECCEEeCHHHH
Confidence 678999999999999999987521 11 599999999987 79999999999999999999999999
Q ss_pred HHHHhhCCCCC
Q psy4547 82 EVALRDYPVSR 92 (92)
Q Consensus 82 E~~l~~~~~V~ 92 (92)
|++|.+||.|+
T Consensus 434 E~~l~~~p~V~ 444 (525)
T PRK05851 434 ERVAAQVRGVR 444 (525)
T ss_pred HHHHHhCCCcc
Confidence 99999999984
No 32
>PRK05857 acyl-CoA synthetase; Validated
Probab=99.88 E-value=7.5e-23 Score=139.30 Aligned_cols=80 Identities=28% Similarity=0.402 Sum_probs=74.2
Q ss_pred CCceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHHH
Q psy4547 2 GTPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQAI 81 (92)
Q Consensus 2 g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~i 81 (92)
|+.|||++++|.++.|||++++.+.+.|.+ +||+|||++++|++|+++|.||.+++||++|.+|+|.+|
T Consensus 372 ~~~Gel~v~g~~~~~GY~~~~~~t~~~~~~-----------g~~~TGDlg~~d~~g~l~~~GR~~~~ik~~G~~v~p~eI 440 (540)
T PRK05857 372 ASFGTLWIKSPANMLGYWNNPERTAEVLID-----------GWVNTGDLLERREDGFFYIKGRSSEMIICGGVNIAPDEV 440 (540)
T ss_pred CCcceEEEeCcchhhhhhCCccchhhhcCC-----------CceeccceEEEcCCceEEEeccccccEecCCEEECHHHH
Confidence 567999999999999999999887777643 599999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCC
Q psy4547 82 EVALRDYPVSR 92 (92)
Q Consensus 82 E~~l~~~~~V~ 92 (92)
|++|..||.|+
T Consensus 441 E~~l~~~~~V~ 451 (540)
T PRK05857 441 DRIAEGVSGVR 451 (540)
T ss_pred HHHHHhCCCee
Confidence 99999999874
No 33
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=99.88 E-value=4.7e-23 Score=143.48 Aligned_cols=79 Identities=27% Similarity=0.543 Sum_probs=73.0
Q ss_pred CceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEE-ccEEechHHH
Q psy4547 3 TPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKI-RGYTIELQAI 81 (92)
Q Consensus 3 ~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~-~G~~v~~~~i 81 (92)
..|||+|+||.++.|||++++.+...|. + +||+|||++++|++|+|+|.||++|+||+ +|++|+|.+|
T Consensus 464 ~~GEi~vrg~~v~~GY~~~~e~t~~~~~-d----------Gw~~TGDig~~d~dG~l~i~gR~kd~ik~~~G~~V~p~~I 532 (660)
T PLN02430 464 PRGEICVRGKCLFSGYYKNPELTEEVMK-D----------GWFHTGDIGEILPNGVLKIIDRKKNLIKLSQGEYVALEYL 532 (660)
T ss_pred CcceEEecCCCccccccCChHHhhhhhh-c----------cceeccceEEECCCCcEEEEEcccccEEcCCCcEEchHHH
Confidence 4699999999999999999998887773 2 69999999999999999999999999997 6999999999
Q ss_pred HHHHhhCCCCC
Q psy4547 82 EVALRDYPVSR 92 (92)
Q Consensus 82 E~~l~~~~~V~ 92 (92)
|++|.+||.|.
T Consensus 533 E~~l~~~p~V~ 543 (660)
T PLN02430 533 ENVYGQNPIVE 543 (660)
T ss_pred HHHHhcCCCee
Confidence 99999999884
No 34
>PRK12467 peptide synthase; Provisional
Probab=99.88 E-value=8.6e-23 Score=159.42 Aligned_cols=89 Identities=48% Similarity=0.799 Sum_probs=81.1
Q ss_pred CCCceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHH
Q psy4547 1 MGTPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQA 80 (92)
Q Consensus 1 ~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~ 80 (92)
+|++|||+++|+++++||+++++.+.+.|..+++.. .+.+||+|||++++++||.|+|+||+|++||++|++|+|.|
T Consensus 1915 ~G~~GEl~i~G~~v~~GYl~~p~~t~~~f~~~p~~~---~~~r~yrTGDl~~~~~dG~l~~~GR~D~qVki~G~rIel~e 1991 (3956)
T PRK12467 1915 IGVAGELYLGGVGLARGYLNRPALTAERFVADPFGT---VGSRLYRTGDLARYRADGVIEYLGRIDHQVKIRGFRIELGE 1991 (3956)
T ss_pred CCCceEEEeccccccccccCChhhhhhhCcCCCCCC---CCccceeccceEEECCCCCEEEecccCceEEeCeEEechHH
Confidence 478999999999999999999999999998766421 23479999999999999999999999999999999999999
Q ss_pred HHHHHhhCCCCC
Q psy4547 81 IEVALRDYPVSR 92 (92)
Q Consensus 81 iE~~l~~~~~V~ 92 (92)
||++|.+||.|+
T Consensus 1992 IE~~l~~~p~V~ 2003 (3956)
T PRK12467 1992 IEARLREQGGVR 2003 (3956)
T ss_pred HHHHHHhCCCcc
Confidence 999999999985
No 35
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=99.88 E-value=1e-22 Score=141.51 Aligned_cols=84 Identities=25% Similarity=0.410 Sum_probs=71.1
Q ss_pred CCCceeEEEecC--cccccccCCCcccc--cccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEe
Q psy4547 1 MGTPGDIYIGGP--TLAIGYLNRPDLNK--MRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTI 76 (92)
Q Consensus 1 ~g~~Gel~v~~~--~~~~gy~~~~~~~~--~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v 76 (92)
+|+.|||++++| +++.|||++++.+. +.+... ..+||+|||++++|+||+|+|+||+||+||++|++|
T Consensus 461 ~g~~GEl~v~gp~p~~~~gy~~~~~~t~~~~~~~~~--------~~g~~~tGDlg~~d~dG~l~i~GR~dd~I~~~G~ri 532 (652)
T TIGR01217 461 TGEVGELVCTNPMPSMPIRFWNDPDGSKYRDAYFDT--------YPGVWRHGDWITLTPRGGIVIHGRSDSTLNPQGVRM 532 (652)
T ss_pred CCCccEEEEecCCCccccceeCCCccchhHHhhhcC--------CCCEEEcCCcEEECCCCcEEEEecccCeEecCCEEc
Confidence 378899999996 68999999987543 122111 115899999999999999999999999999999999
Q ss_pred chHHHHHHHhhCCCCC
Q psy4547 77 ELQAIEVALRDYPVSR 92 (92)
Q Consensus 77 ~~~~iE~~l~~~~~V~ 92 (92)
+|.|||++|.+||.|.
T Consensus 533 ~p~EIE~~l~~~p~V~ 548 (652)
T TIGR01217 533 GSAEIYNAVERLDEVR 548 (652)
T ss_pred CHHHHHHHHHhCCCcc
Confidence 9999999999999984
No 36
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.88 E-value=1.2e-22 Score=138.67 Aligned_cols=82 Identities=24% Similarity=0.480 Sum_probs=75.7
Q ss_pred CCCceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHH
Q psy4547 1 MGTPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQA 80 (92)
Q Consensus 1 ~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~ 80 (92)
+|+.|||++++|.++.|||++++.+.+.|..+ +||+|||+++++++|.++|.||++++||++|.+|+|.+
T Consensus 401 ~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~----------g~~~TGDlg~~~~~G~l~i~GR~~d~i~~~G~~i~p~e 470 (562)
T PRK05677 401 LGEVGELCVKGPQVMKGYWQRPEATDEILDSD----------GWLKTGDIALIQEDGYMRIVDRKKDMILVSGFNVYPNE 470 (562)
T ss_pred CCCCeEEEEecCccchhhcCCchhhhhccCCC----------CcccccceEEECCCCcEEEEecCcCeEEeCCEEECHHH
Confidence 36789999999999999999998887777543 69999999999999999999999999999999999999
Q ss_pred HHHHHhhCCCCC
Q psy4547 81 IEVALRDYPVSR 92 (92)
Q Consensus 81 iE~~l~~~~~V~ 92 (92)
||++|.+||.|+
T Consensus 471 iE~~l~~~~~v~ 482 (562)
T PRK05677 471 LEDVLAALPGVL 482 (562)
T ss_pred HHHHHHhCCCcc
Confidence 999999999874
No 37
>PRK05850 acyl-CoA synthetase; Validated
Probab=99.88 E-value=9.9e-23 Score=139.34 Aligned_cols=90 Identities=24% Similarity=0.423 Sum_probs=75.1
Q ss_pred CCCceeEEEecCcccccccCCCcccccccccCCcccc-cccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechH
Q psy4547 1 MGTPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLR-KTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQ 79 (92)
Q Consensus 1 ~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~-~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~ 79 (92)
+|+.|||+++||.++.|||++++.+.+.|........ .....+||+|||+++++ +|+++|+||++|+||++|.+|+|.
T Consensus 394 ~g~~Gel~v~g~~~~~gY~~~~~~t~~~f~~~~~~~~~~~~~~~w~~TGDl~~~~-~G~l~~~GR~~d~i~~~G~~i~p~ 472 (578)
T PRK05850 394 AGTVGEIWVHGDNVAAGYWQKPEETERTFGATLVDPSPGTPEGPWLRTGDLGFIS-EGELFIVGRIKDLLIVDGRNHYPD 472 (578)
T ss_pred CCCEEEEEEecCcccccccCChhhhHHHhhcccccccccCCCCCeeeccceeeEE-CCEEEEEcccccEEEECCeecCHH
Confidence 4788999999999999999999988888753211100 11123699999999998 899999999999999999999999
Q ss_pred HHHHHHhhCCCC
Q psy4547 80 AIEVALRDYPVS 91 (92)
Q Consensus 80 ~iE~~l~~~~~V 91 (92)
|||++|.+||.+
T Consensus 473 eIE~~l~~~~~~ 484 (578)
T PRK05850 473 DIEATIQEITGG 484 (578)
T ss_pred HHHHHHHHhcCC
Confidence 999999999864
No 38
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=99.88 E-value=1.5e-22 Score=137.19 Aligned_cols=82 Identities=28% Similarity=0.410 Sum_probs=75.5
Q ss_pred CCCceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHH
Q psy4547 1 MGTPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQA 80 (92)
Q Consensus 1 ~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~ 80 (92)
+|+.|||+++|+.++.|||++++.+...+..+ +||+|||+++++++|++++.||.+++|+++|.+|+|.+
T Consensus 376 ~g~~Gei~v~g~~~~~gY~~~~~~~~~~~~~d----------g~~~TGDl~~~~~~g~l~~~gR~~d~i~~~G~~v~~~e 445 (527)
T TIGR02275 376 PGETGMLLTRGPYTFRGYYKAPEHNAAAFDAE----------GFYYTGDLVRLTPEGYIVVVGRAKDQINRGGEKIAAEE 445 (527)
T ss_pred CCCceEEEecCCccchhhcCChhHhHhhcCcC----------CCEEcCceEEEcCCccEEEEecccceeecCCEEECHHH
Confidence 37889999999999999999998877766544 69999999999999999999999999999999999999
Q ss_pred HHHHHhhCCCCC
Q psy4547 81 IEVALRDYPVSR 92 (92)
Q Consensus 81 iE~~l~~~~~V~ 92 (92)
||++|.+||.|+
T Consensus 446 iE~~l~~~~~v~ 457 (527)
T TIGR02275 446 IENLLLAHPAVH 457 (527)
T ss_pred HHHHHHhCCCce
Confidence 999999999874
No 39
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=99.87 E-value=2.9e-22 Score=139.08 Aligned_cols=86 Identities=22% Similarity=0.383 Sum_probs=70.7
Q ss_pred CCCceeEEEecC--cccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEech
Q psy4547 1 MGTPGDIYIGGP--TLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIEL 78 (92)
Q Consensus 1 ~g~~Gel~v~~~--~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~ 78 (92)
+|+.|||+|++| +++.|||++++.+. +....+.. ..+||+|||++++|+||+++|+||+||+||++|++|+|
T Consensus 460 ~g~~GeL~v~gp~p~~~~gy~~~~~~~~--~~~~~~~~----~~g~~~TGDl~~~d~dG~l~i~GR~dd~Ik~~G~rI~p 533 (655)
T PRK03584 460 VGEVGELVCTKPFPSMPLGFWNDPDGSR--YRDAYFDT----FPGVWRHGDWIEITEHGGVVIYGRSDATLNRGGVRIGT 533 (655)
T ss_pred CCCceEEEEccCCCCCcceeeCCCccch--HHHhhhcc----CCCEeecCCeEEECCCCeEEEEeeccCeeecCcEEECH
Confidence 378899999995 78999999887432 11111100 01589999999999999999999999999999999999
Q ss_pred HHHHHHHhhCCCCC
Q psy4547 79 QAIEVALRDYPVSR 92 (92)
Q Consensus 79 ~~iE~~l~~~~~V~ 92 (92)
.|||++|.+||.|+
T Consensus 534 ~EIE~~l~~~p~V~ 547 (655)
T PRK03584 534 AEIYRQVEALPEVL 547 (655)
T ss_pred HHHHHHHHhCCCcc
Confidence 99999999999884
No 40
>PRK05691 peptide synthase; Validated
Probab=99.87 E-value=2.5e-22 Score=157.49 Aligned_cols=89 Identities=42% Similarity=0.681 Sum_probs=80.8
Q ss_pred CCCceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHH
Q psy4547 1 MGTPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQA 80 (92)
Q Consensus 1 ~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~ 80 (92)
+|++|||+|+||.+++||+++++.+.+.|..+++.. .+.+||+|||++++++||.++|+||+|++||++|++|+|.|
T Consensus 1466 ~G~~GEL~i~G~~v~~GYl~~p~~t~~~f~~~p~~~---~~~r~yrTGDl~~~~~dG~l~~~GR~d~qiki~G~rie~~e 1542 (4334)
T PRK05691 1466 PGVAGELCIGGAGLARGYLGRPALTAERFVPDPLGE---DGARLYRTGDRARWNADGALEYLGRLDQQVKLRGFRVEPEE 1542 (4334)
T ss_pred CCCceEEEecCcccchhhcCCccccHhhCCCCCCCC---CCceEEEccceEEECCCCCEEEecccCcEEEECCEEcCHHH
Confidence 478999999999999999999999999998765421 23479999999999999999999999999999999999999
Q ss_pred HHHHHhhCCCCC
Q psy4547 81 IEVALRDYPVSR 92 (92)
Q Consensus 81 iE~~l~~~~~V~ 92 (92)
||++|.+||.|+
T Consensus 1543 IE~~l~~~~~V~ 1554 (4334)
T PRK05691 1543 IQARLLAQPGVA 1554 (4334)
T ss_pred HHHHHHhCCCcc
Confidence 999999999884
No 41
>PRK06060 acyl-CoA synthetase; Validated
Probab=99.87 E-value=2.2e-22 Score=140.57 Aligned_cols=79 Identities=27% Similarity=0.386 Sum_probs=70.7
Q ss_pred CCCceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHH
Q psy4547 1 MGTPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQA 80 (92)
Q Consensus 1 ~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~ 80 (92)
+|+.|||+++|+.++.|||++++.+. .. .+||+|||+++++++|+++|+||+||+||++|++|+|.+
T Consensus 336 ~g~~GEl~i~g~~v~~GY~~~~~~~~---~~----------~~~~~TGDl~~~~~dG~l~~~GR~dd~ik~~G~~v~~~e 402 (705)
T PRK06060 336 PGVEGDLWVRGPAIAKGYWNRPDSPV---AN----------EGWLDTRDRVCIDSDGWVTYRCRADDTEVIGGVNVDPRE 402 (705)
T ss_pred CCCceEEEEccchhhhhhhCCCcccc---cC----------CCcEECCeeEEECCCceEEEecccCceEEECCEEECHHH
Confidence 47789999999999999999887431 11 169999999999999999999999999999999999999
Q ss_pred HHHHHhhCCCCC
Q psy4547 81 IEVALRDYPVSR 92 (92)
Q Consensus 81 iE~~l~~~~~V~ 92 (92)
||++|.+||.|.
T Consensus 403 IE~~l~~~~~V~ 414 (705)
T PRK06060 403 VERLIIEDEAVA 414 (705)
T ss_pred HHHHHHhCCCee
Confidence 999999999873
No 42
>PRK09088 acyl-CoA synthetase; Validated
Probab=99.87 E-value=3e-22 Score=134.50 Aligned_cols=81 Identities=33% Similarity=0.546 Sum_probs=74.2
Q ss_pred CCceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHHH
Q psy4547 2 GTPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQAI 81 (92)
Q Consensus 2 g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~i 81 (92)
|++|||++++|.++.||+++++.+...+..+ +||+|||+++++++|.++|.||.+|+|+++|.+|+|.+|
T Consensus 330 g~~Gel~v~~~~~~~gY~~~~~~~~~~~~~~----------g~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~i~~~~i 399 (488)
T PRK09088 330 GVPGELLLRGPNLSPGYWRRPQATARAFTGD----------GWFRTGDIARRDADGFFWVVDRKKDMFISGGENVYPAEI 399 (488)
T ss_pred CCceEEEEECCccchhhcCChhhhhhhhcCC----------CCeeecceEEEcCCCcEEEeccccceEEeCCEEECHHHH
Confidence 6789999999999999999988777666433 699999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCC
Q psy4547 82 EVALRDYPVSR 92 (92)
Q Consensus 82 E~~l~~~~~V~ 92 (92)
|++|.+||.|+
T Consensus 400 E~~l~~~~~v~ 410 (488)
T PRK09088 400 EAVLADHPGIR 410 (488)
T ss_pred HHHHHhCCCcc
Confidence 99999999874
No 43
>PLN02246 4-coumarate--CoA ligase
Probab=99.87 E-value=2.9e-22 Score=136.10 Aligned_cols=82 Identities=28% Similarity=0.523 Sum_probs=74.7
Q ss_pred CCCceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHH
Q psy4547 1 MGTPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQA 80 (92)
Q Consensus 1 ~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~ 80 (92)
+|+.|||+++|+.++.|||++++.+...+... +||+|||+++++++|.++|.||++++||++|.+|+|.+
T Consensus 380 ~g~~Gel~v~g~~~~~GY~~~~~~~~~~~~~~----------~~~~TGD~~~~~~~g~l~~~GR~dd~i~~~G~~i~~~e 449 (537)
T PLN02246 380 RNQPGEICIRGPQIMKGYLNDPEATANTIDKD----------GWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAE 449 (537)
T ss_pred CCCceEEEEECCchhccccCCchhhhhcccCC----------CCeeecceEEEeCCCeEEEEecccceEEECCEEECcHH
Confidence 36789999999999999999998776666433 69999999999999999999999999999999999999
Q ss_pred HHHHHhhCCCCC
Q psy4547 81 IEVALRDYPVSR 92 (92)
Q Consensus 81 iE~~l~~~~~V~ 92 (92)
||++|.+||.|+
T Consensus 450 IE~~l~~~~~v~ 461 (537)
T PLN02246 450 LEALLISHPSIA 461 (537)
T ss_pred HHHHHHhCCCee
Confidence 999999999874
No 44
>PRK13390 acyl-CoA synthetase; Provisional
Probab=99.87 E-value=2.8e-22 Score=135.06 Aligned_cols=84 Identities=26% Similarity=0.304 Sum_probs=75.3
Q ss_pred CCCceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHH
Q psy4547 1 MGTPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQA 80 (92)
Q Consensus 1 ~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~ 80 (92)
+|++|||+++++.++.|||++++.+...+.... .+|++|||+++++++|.++|.||.+++||++|.+|+|.+
T Consensus 345 ~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~--------~~w~~tGDl~~~~~dg~l~~~gR~~~~i~~~G~~v~p~e 416 (501)
T PRK13390 345 AGRIGTVYFERDRLPFRYLNDPEKTAAAQHPAH--------PFWTTVGDLGSVDEDGYLYLADRKSFMIISGGVNIYPQE 416 (501)
T ss_pred CCCceEEEEecCCccccccCChhhhHHhhccCC--------CceEEcCceEEECCCCeEEEeeccccceeECCeeeCHHH
Confidence 478999999999999999999988777654321 159999999999999999999999999999999999999
Q ss_pred HHHHHhhCCCCC
Q psy4547 81 IEVALRDYPVSR 92 (92)
Q Consensus 81 iE~~l~~~~~V~ 92 (92)
||++|.+||.|+
T Consensus 417 IE~~l~~~~~v~ 428 (501)
T PRK13390 417 TENALTMHPAVH 428 (501)
T ss_pred HHHHHHhCCCee
Confidence 999999999874
No 45
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=99.87 E-value=3.4e-22 Score=136.51 Aligned_cols=82 Identities=22% Similarity=0.459 Sum_probs=74.9
Q ss_pred CCCceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHH
Q psy4547 1 MGTPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQA 80 (92)
Q Consensus 1 ~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~ 80 (92)
+|+.|||+++++.++.|||++++.+.+.|..+ +||+|||+++++++|.++|.||.+++||++|.+|+|.+
T Consensus 409 ~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~----------g~~~TGD~g~~~~~G~l~i~GR~~~~i~~~G~~i~~~e 478 (562)
T PRK12492 409 LGERGELCIKGPQVMKGYWQQPEATAEALDAE----------GWFKTGDIAVIDPDGFVRIVDRKKDLIIVSGFNVYPNE 478 (562)
T ss_pred CCCceEEEEeCCccccccccCchhhhhcccCC----------CceecCcEEEECCCCeEEEecccCCeEEECCEEECHHH
Confidence 36789999999999999999998777766433 59999999999999999999999999999999999999
Q ss_pred HHHHHhhCCCCC
Q psy4547 81 IEVALRDYPVSR 92 (92)
Q Consensus 81 iE~~l~~~~~V~ 92 (92)
||+.|.+||.|+
T Consensus 479 IE~~l~~~~~v~ 490 (562)
T PRK12492 479 IEDVVMAHPKVA 490 (562)
T ss_pred HHHHHHhCCCee
Confidence 999999999874
No 46
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=99.87 E-value=3.2e-22 Score=136.01 Aligned_cols=82 Identities=28% Similarity=0.396 Sum_probs=75.7
Q ss_pred CCCceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHH
Q psy4547 1 MGTPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQA 80 (92)
Q Consensus 1 ~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~ 80 (92)
+|+.|||+++|+.++.|||++++.+...|..+ +||+|||++++|++|++++.||.+|+++++|.+|+|.+
T Consensus 377 ~g~~Gel~v~g~~~~~GY~~~~~~t~~~~~~d----------~~~~TGDl~~~d~~G~l~~~gR~~d~i~~~G~~v~~~e 446 (536)
T PRK10946 377 QGEVGRLMTRGPYTFRGYYKSPQHNASAFDAN----------GFYCSGDLVSIDPDGYITVVGREKDQINRGGEKIAAEE 446 (536)
T ss_pred CCCccEEEEecCccchhhcCCcccchhhcccC----------CceecCceEEECCCCcEEEeccccceeecCCEEEcHHH
Confidence 47889999999999999999998877777554 59999999999999999999999999999999999999
Q ss_pred HHHHHhhCCCCC
Q psy4547 81 IEVALRDYPVSR 92 (92)
Q Consensus 81 iE~~l~~~~~V~ 92 (92)
||+.|.+||.|+
T Consensus 447 iE~~l~~~~~v~ 458 (536)
T PRK10946 447 IENLLLRHPAVI 458 (536)
T ss_pred HHHHHHhCCCcc
Confidence 999999999874
No 47
>PLN03051 acyl-activating enzyme; Provisional
Probab=99.87 E-value=6.9e-22 Score=133.65 Aligned_cols=87 Identities=22% Similarity=0.238 Sum_probs=68.1
Q ss_pred CceeEEEecCcc--cccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHH
Q psy4547 3 TPGDIYIGGPTL--AIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQA 80 (92)
Q Consensus 3 ~~Gel~v~~~~~--~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~ 80 (92)
++|||+++||.+ +.|||+++. + ..+.+...+. ...+.+||+|||++++|+||+|+|+||.||+||++|++|+|.|
T Consensus 318 ~~Gel~v~g~~~~~~~gy~~~~~-~-~~~~~g~~~~-~~~~~~~~~TGDlg~~d~dG~l~~~gR~~d~ik~~G~~v~p~E 394 (499)
T PLN03051 318 CVGEVALAPPMLGASDRLLNADH-D-KVYYKGMPMY-GSKGMPLRRHGDIMKRTPGGYFCVQGRADDTMNLGGIKTSSVE 394 (499)
T ss_pred cceEEEEecCcCCCCccccCCcc-c-ceeeecCCcc-ccCCcceeecCCeEEECCCCcEEEEeccCCEEeeCCEECCHHH
Confidence 579999999976 579997642 2 2332211110 0112359999999999999999999999999999999999999
Q ss_pred HHHHHhh-CCCCC
Q psy4547 81 IEVALRD-YPVSR 92 (92)
Q Consensus 81 iE~~l~~-~~~V~ 92 (92)
||++|.+ ||.|.
T Consensus 395 IE~~l~~~~p~V~ 407 (499)
T PLN03051 395 IERACDRAVAGIA 407 (499)
T ss_pred HHHHHHhcCCCcc
Confidence 9999996 99884
No 48
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=99.87 E-value=4.6e-22 Score=137.60 Aligned_cols=85 Identities=20% Similarity=0.268 Sum_probs=72.0
Q ss_pred CCCceeEEEecC---cccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEec
Q psy4547 1 MGTPGDIYIGGP---TLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIE 77 (92)
Q Consensus 1 ~g~~Gel~v~~~---~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~ 77 (92)
+|+.|||++++| +.+.+||++++.+.+.+.... ..+||+|||++++|+||+++|+||+||+||++|++|+
T Consensus 434 ~g~~Gel~v~gp~~~g~~~~~~~~~~~~~~~~~~~~-------~~~~~~TGD~g~~d~dG~l~i~GR~dd~ik~~G~rv~ 506 (628)
T TIGR02316 434 PNEKGVLTVVPPLPPGCLSTVWGDDARFLKTYWSHF-------KRPLYSSFDWGIRDEDGYTFILGRTDDVINVAGHRLG 506 (628)
T ss_pred CCCcEEEEEecCCCccccccccCChHHHHHhhhhcC-------CCCEEECCceEEEcCCCcEEEEEcCcceEEeCCEEeC
Confidence 367899999998 567899998875554432211 1269999999999999999999999999999999999
Q ss_pred hHHHHHHHhhCCCCC
Q psy4547 78 LQAIEVALRDYPVSR 92 (92)
Q Consensus 78 ~~~iE~~l~~~~~V~ 92 (92)
|.|||++|.+||.|+
T Consensus 507 ~~eIE~~l~~~p~V~ 521 (628)
T TIGR02316 507 TREIEESVSSHPSVA 521 (628)
T ss_pred HHHHHHHHHhCCCcc
Confidence 999999999999884
No 49
>PRK05852 acyl-CoA synthetase; Validated
Probab=99.87 E-value=3.6e-22 Score=135.59 Aligned_cols=81 Identities=26% Similarity=0.487 Sum_probs=74.7
Q ss_pred CCCceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHH
Q psy4547 1 MGTPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQA 80 (92)
Q Consensus 1 ~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~ 80 (92)
+|+.|||+++++.+++|||++++.+.+.|.+ +||+|||++++|++|++++.||++|+||++|.+|+|.+
T Consensus 377 ~g~~Gel~v~g~~v~~gY~~~~~~t~~~~~~-----------g~~~TGD~~~~d~dG~l~~~gR~~d~i~~~G~~v~~~~ 445 (534)
T PRK05852 377 AGAVGEVWLRGTTVVRGYLGDPTITAANFTD-----------GWLRTGDLGSLSAAGDLSIRGRIKELINRGGEKISPER 445 (534)
T ss_pred CCCceEEEEecCcccchhcCCcccchhhhcC-----------CCcccCceEEEeCCCcEEEEecchhhEEECCEEECHHH
Confidence 4678999999999999999999887776643 59999999999999999999999999999999999999
Q ss_pred HHHHHhhCCCCC
Q psy4547 81 IEVALRDYPVSR 92 (92)
Q Consensus 81 iE~~l~~~~~V~ 92 (92)
||++|.+||.|+
T Consensus 446 iE~~l~~~~~V~ 457 (534)
T PRK05852 446 VEGVLASHPNVM 457 (534)
T ss_pred HHHHHHhCCCee
Confidence 999999999874
No 50
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=99.87 E-value=4.5e-22 Score=136.13 Aligned_cols=81 Identities=27% Similarity=0.416 Sum_probs=74.2
Q ss_pred CCCceeEEEec--CcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEech
Q psy4547 1 MGTPGDIYIGG--PTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIEL 78 (92)
Q Consensus 1 ~g~~Gel~v~~--~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~ 78 (92)
+|++|||++++ |.++.|||++++.+...|.+ +||+|||+++++++|+++|+||++|+||++|.+|+|
T Consensus 399 ~g~~Gel~i~~~~~~~~~GY~~~~~~~~~~~~~-----------gw~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~i~p 467 (570)
T PRK04319 399 PNRMGNLAIKKGWPSMMRGIWNNPEKYESYFAG-----------DWYVSGDSAYMDEDGYFWFQGRVDDVIKTSGERVGP 467 (570)
T ss_pred CCCceEEEEcCCCChHHhHhcCCHHHhhhhhcC-----------CceEeCcEEEECCCeeEEEEecCCCEEEECCEEECH
Confidence 47889999987 89999999999887777642 599999999999999999999999999999999999
Q ss_pred HHHHHHHhhCCCCC
Q psy4547 79 QAIEVALRDYPVSR 92 (92)
Q Consensus 79 ~~iE~~l~~~~~V~ 92 (92)
.+||++|.+||.|+
T Consensus 468 ~eIE~~l~~~~~V~ 481 (570)
T PRK04319 468 FEVESKLMEHPAVA 481 (570)
T ss_pred HHHHHHHhhCCCee
Confidence 99999999999874
No 51
>PLN02479 acetate-CoA ligase
Probab=99.86 E-value=7e-22 Score=135.19 Aligned_cols=79 Identities=28% Similarity=0.453 Sum_probs=73.7
Q ss_pred CceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHHHH
Q psy4547 3 TPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQAIE 82 (92)
Q Consensus 3 ~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~iE 82 (92)
++|||+++|+.++.|||++++.+.+.|.. +||+|||+++++++|+++|.||.+++||++|.+|+|.+||
T Consensus 401 ~~GEl~v~g~~~~~GY~~~~~~t~~~~~~-----------g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eIE 469 (567)
T PLN02479 401 TMGEIVMRGNMVMKGYLKNPKANEEAFAN-----------GWFHSGDLGVKHPDGYIEIKDRSKDIIISGGENISSLEVE 469 (567)
T ss_pred CceEEEEeccchhhhhhcCcccccchhcC-----------CceecceeEEEcCCccEEEeccccceEEeCCEEEcHHHHH
Confidence 47999999999999999999988887743 5999999999999999999999999999999999999999
Q ss_pred HHHhhCCCCC
Q psy4547 83 VALRDYPVSR 92 (92)
Q Consensus 83 ~~l~~~~~V~ 92 (92)
.+|.+||.|+
T Consensus 470 ~~l~~~~~v~ 479 (567)
T PLN02479 470 NVVYTHPAVL 479 (567)
T ss_pred HHHHhCcccc
Confidence 9999999874
No 52
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.86 E-value=2e-22 Score=132.24 Aligned_cols=81 Identities=27% Similarity=0.399 Sum_probs=78.1
Q ss_pred CCCceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHH
Q psy4547 1 MGTPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQA 80 (92)
Q Consensus 1 ~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~ 80 (92)
||++|+|..+||...+|||+.++-+...|..+ +||+|||+++++++|++.+.||.+|+|+.+|++|..+|
T Consensus 382 pGE~G~LltRGPYTirGYyrap~HNa~aF~a~----------GFYrsGD~V~~~~dGyl~V~GR~KDQINRgGEKIAAeE 451 (542)
T COG1021 382 PGEVGELLTRGPYTIRGYYRAPEHNARAFDAD----------GFYRSGDLVRRDPDGYLVVEGRVKDQINRGGEKIAAEE 451 (542)
T ss_pred CCCcceeeecCCeeeeeeccCchhhhhccCcC----------CceecCceeEecCCceEEEEeeehhhhccccchhhHHH
Confidence 69999999999999999999999889999777 79999999999999999999999999999999999999
Q ss_pred HHHHHhhCCCC
Q psy4547 81 IEVALRDYPVS 91 (92)
Q Consensus 81 iE~~l~~~~~V 91 (92)
||+.|+.||.|
T Consensus 452 vEn~LL~HP~V 462 (542)
T COG1021 452 VENLLLRHPAV 462 (542)
T ss_pred HHHHHhhCchh
Confidence 99999999987
No 53
>PRK07638 acyl-CoA synthetase; Validated
Probab=99.86 E-value=9.1e-22 Score=132.22 Aligned_cols=81 Identities=25% Similarity=0.422 Sum_probs=72.2
Q ss_pred CCCceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHH
Q psy4547 1 MGTPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQA 80 (92)
Q Consensus 1 ~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~ 80 (92)
+|+.|||+++++.++.|||+++..+...+. + +||+|||++++|++|++++.||++|+||++|.+|+|.+
T Consensus 330 ~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~-~----------g~~~TGDl~~~d~~g~l~i~GR~~d~i~~~G~~v~~~e 398 (487)
T PRK07638 330 KGEIGTVYVKSPQFFMGYIIGGVLARELNA-D----------GWMTVRDVGYEDEEGFIYIVGREKNMILFGGINIFPEE 398 (487)
T ss_pred CCCCeEEEEecccceeeecCCHHHHhhhcc-C----------CcEecCccEeEcCCCeEEEEecCCCeEEeCCEEECHHH
Confidence 478899999999999999998865443322 1 69999999999999999999999999999999999999
Q ss_pred HHHHHhhCCCCC
Q psy4547 81 IEVALRDYPVSR 92 (92)
Q Consensus 81 iE~~l~~~~~V~ 92 (92)
||++|.+||.|+
T Consensus 399 iE~~l~~~~~v~ 410 (487)
T PRK07638 399 IESVLHEHPAVD 410 (487)
T ss_pred HHHHHHhCCCee
Confidence 999999999874
No 54
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.86 E-value=6.3e-22 Score=143.06 Aligned_cols=83 Identities=33% Similarity=0.448 Sum_probs=74.6
Q ss_pred CCCceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHH
Q psy4547 1 MGTPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQA 80 (92)
Q Consensus 1 ~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~ 80 (92)
+|+.|||+++||.++.|||++++.+.+.+.+. .+.+||+|||++++|+||++++.||.||+||++|++|+|.|
T Consensus 984 ~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~-------~~~~~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~v~~~e 1056 (1146)
T PRK08633 984 PGEDGLILIGGPQVMKGYLGDPEKTAEVIKDI-------DGIGWYVTGDKGHLDEDGFLTITDRYSRFAKIGGEMVPLGA 1056 (1146)
T ss_pred CCCceEEEEcCCCccccccCCccchHHHhhcC-------CCCCeEECCCEEEEcCCceEEEEecccchhhhCcEEECHHH
Confidence 47889999999999999999998887766442 13369999999999999999999999999999999999999
Q ss_pred HHHHHhhCCC
Q psy4547 81 IEVALRDYPV 90 (92)
Q Consensus 81 iE~~l~~~~~ 90 (92)
||++|.+||+
T Consensus 1057 iE~~l~~~~~ 1066 (1146)
T PRK08633 1057 VEEELAKALG 1066 (1146)
T ss_pred HHHHHHhccC
Confidence 9999999984
No 55
>PRK13388 acyl-CoA synthetase; Provisional
Probab=99.86 E-value=1e-21 Score=133.79 Aligned_cols=80 Identities=25% Similarity=0.415 Sum_probs=73.1
Q ss_pred CCceeEEEe-cCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHH
Q psy4547 2 GTPGDIYIG-GPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQA 80 (92)
Q Consensus 2 g~~Gel~v~-~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~ 80 (92)
++.|||+++ |+.++.|||++++.+.+.|.. +||+|||+++++++|.+++.||++++||++|.+|+|.+
T Consensus 349 ~~~GEl~v~~g~~~~~gY~~~~~~t~~~~~~-----------g~~~TGD~~~~~~dg~l~i~GR~~d~i~~~G~~v~p~e 417 (540)
T PRK13388 349 EAIGELVNTAGAGFFEGYYNNPEATAERMRH-----------GMYWSGDLAYRDADGWIYFAGRTADWMRVDGENLSAAP 417 (540)
T ss_pred CcceEEEEecCCcccccccCChHHHHHHhhc-----------CceeccceEEEcCCCcEEEeccCCceEEECCEEeCHHH
Confidence 457999998 999999999999887776632 59999999999999999999999999999999999999
Q ss_pred HHHHHhhCCCCC
Q psy4547 81 IEVALRDYPVSR 92 (92)
Q Consensus 81 iE~~l~~~~~V~ 92 (92)
||++|.+||.|.
T Consensus 418 IE~~l~~~~~V~ 429 (540)
T PRK13388 418 IERILLRHPAIN 429 (540)
T ss_pred HHHHHHhCCCce
Confidence 999999999874
No 56
>PRK06145 acyl-CoA synthetase; Validated
Probab=99.86 E-value=7e-22 Score=132.85 Aligned_cols=80 Identities=24% Similarity=0.469 Sum_probs=74.3
Q ss_pred CCceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHHH
Q psy4547 2 GTPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQAI 81 (92)
Q Consensus 2 g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~i 81 (92)
|+.|||+++|+.++.|||++++.+...|.+ +||+|||+++++++|++++.||++++||++|.+|+|.+|
T Consensus 343 ~~~Gel~v~g~~~~~Gy~~~~~~~~~~~~~-----------~~~~TGDl~~~~~~g~l~~~GR~~~~i~~~G~~v~~~~I 411 (497)
T PRK06145 343 NMKGEICMRGPKVTKGYWKDPEKTAEAFYG-----------DWFRSGDVGYLDEEGFLYLTDRKKDMIISGGENIASSEV 411 (497)
T ss_pred CCceEEEEECcchhhhhcCChHHHHHHHhC-----------CCeeccceEEEcCCCcEEEeccccceEEeCCeEECHHHH
Confidence 678999999999999999999888777743 499999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCC
Q psy4547 82 EVALRDYPVSR 92 (92)
Q Consensus 82 E~~l~~~~~V~ 92 (92)
|+.|.++|.|+
T Consensus 412 E~~l~~~~~v~ 422 (497)
T PRK06145 412 ERVIYELPEVA 422 (497)
T ss_pred HHHHHhCCCee
Confidence 99999999874
No 57
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=99.86 E-value=2.5e-21 Score=129.93 Aligned_cols=75 Identities=24% Similarity=0.401 Sum_probs=67.9
Q ss_pred CCceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHHH
Q psy4547 2 GTPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQAI 81 (92)
Q Consensus 2 g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~i 81 (92)
|+.|||++++|.++.|||+++. .. .+||+|||++++|+||+++|.||.||+||++|.+|+|.+|
T Consensus 299 g~~Gel~v~g~~~~~gY~~~~~------~~----------~g~~~TGDl~~~d~dG~l~~~GR~dd~I~~~G~~V~p~eI 362 (452)
T PRK07445 299 NQTGNITIQAQSLALGYYPQIL------DS----------QGIFETDDLGYLDAQGYLHILGRNSQKIITGGENVYPAEV 362 (452)
T ss_pred CCcceEEEeCCccchhhcCCcc------CC----------CCEEECCCEEEEcCCCCEEEEeecCCEEEECCEEECHHHH
Confidence 6889999999999999997432 11 1699999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCC
Q psy4547 82 EVALRDYPVSR 92 (92)
Q Consensus 82 E~~l~~~~~V~ 92 (92)
|++|.+||.|+
T Consensus 363 E~~l~~~p~V~ 373 (452)
T PRK07445 363 EAAILATGLVQ 373 (452)
T ss_pred HHHHHhCCCcc
Confidence 99999999884
No 58
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=99.86 E-value=2.4e-21 Score=130.26 Aligned_cols=84 Identities=38% Similarity=0.589 Sum_probs=74.1
Q ss_pred CCCceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHH
Q psy4547 1 MGTPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQA 80 (92)
Q Consensus 1 ~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~ 80 (92)
+|+.|||+++|+.++.||+++++.+...|... .+.+||+|||+++++++ ++++.||.+|+|+++|.+|+|.+
T Consensus 339 ~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~-------~~~~~~~TGDlg~~~~~-~l~i~GR~~d~i~~~G~~v~~~~ 410 (502)
T TIGR01734 339 EGEKGEIVIVGPSVSKGYLNNPEKTAEAFFSH-------EGQPAYRTGDAGTITDG-QLFYQGRLDFQIKLHGYRIELED 410 (502)
T ss_pred CCCeeEEEEccccccccccCCcccchHhheeC-------CCcEEEECCCEEEEECC-EEEEeccccCeEEECcEEeCHHH
Confidence 36789999999999999999988777666432 13369999999999987 99999999999999999999999
Q ss_pred HHHHHhhCCCCC
Q psy4547 81 IEVALRDYPVSR 92 (92)
Q Consensus 81 iE~~l~~~~~V~ 92 (92)
||+.|.+||.|+
T Consensus 411 IE~~l~~~~~v~ 422 (502)
T TIGR01734 411 IEFNLRQSSYIE 422 (502)
T ss_pred HHHHHHcCCCcc
Confidence 999999999874
No 59
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=99.86 E-value=5.9e-22 Score=134.91 Aligned_cols=82 Identities=23% Similarity=0.448 Sum_probs=74.3
Q ss_pred CCCceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHH
Q psy4547 1 MGTPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQA 80 (92)
Q Consensus 1 ~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~ 80 (92)
+|+.|||+++|+.++.||+++++.+...+... +||+|||+++++++|.++|.||.+++|+++|.+|+|.+
T Consensus 385 ~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~----------g~~~TGD~~~~~~dG~l~~~GR~~d~i~~~G~~v~~~~ 454 (546)
T PLN02330 385 KNTPGELCVRSQCVMQGYYNNKEETDRTIDED----------GWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAE 454 (546)
T ss_pred CCCceEEEEecchhhhhhccCccchhhhccCC----------CceecccEEEEeCCCcEEEEechHHhhhcCCEEECHHH
Confidence 37789999999999999999988776655333 69999999999999999999999999999999999999
Q ss_pred HHHHHhhCCCCC
Q psy4547 81 IEVALRDYPVSR 92 (92)
Q Consensus 81 iE~~l~~~~~V~ 92 (92)
||++|.+||.|.
T Consensus 455 iE~~l~~~~~v~ 466 (546)
T PLN02330 455 LEAILLTHPSVE 466 (546)
T ss_pred HHHHHHhCCchh
Confidence 999999999874
No 60
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=99.86 E-value=3e-21 Score=126.75 Aligned_cols=89 Identities=53% Similarity=0.844 Sum_probs=77.0
Q ss_pred CCceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHHH
Q psy4547 2 GTPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQAI 81 (92)
Q Consensus 2 g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~i 81 (92)
|+.|||+++++.++.+|+++++.+...|....+.... +..||+|||+++++++|.+++.||.+|+++++|.+|+|.+|
T Consensus 316 g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~--~~~~~~TGDl~~~d~~g~~~~~gR~~~~i~~~G~~v~~~~i 393 (408)
T TIGR01733 316 GVVGELYIGGPGVARGYLNRPELTAERFVPDPFAGGD--GARLYRTGDLVRYLPDGNLEFLGRIDDQVKIRGYRIELGEI 393 (408)
T ss_pred CCceEEEecCccccccccCChhhhhcceeeCCCCCCC--CceEEECCceEEEcCCCCEEEeeccCCEEEeCeEEechHHH
Confidence 6789999999999999999998888777654332111 12499999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCC
Q psy4547 82 EVALRDYPVSR 92 (92)
Q Consensus 82 E~~l~~~~~V~ 92 (92)
|+.|..||.|+
T Consensus 394 e~~l~~~~~v~ 404 (408)
T TIGR01733 394 EAALLRHPGVR 404 (408)
T ss_pred HHHHhcCcchh
Confidence 99999999874
No 61
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.86 E-value=1.5e-21 Score=132.63 Aligned_cols=84 Identities=31% Similarity=0.549 Sum_probs=74.9
Q ss_pred CCceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHHH
Q psy4547 2 GTPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQAI 81 (92)
Q Consensus 2 g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~i 81 (92)
|+.|||+++++.++.||+++++.+.+.|... .+.+||+|||+++++++|.+++.||++|+|+++|.+|+|.+|
T Consensus 382 g~~Gel~v~g~~~~~gY~~~~~~t~~~f~~~-------~~~~~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eI 454 (546)
T PRK08314 382 GEVGEIVVHGPQVFKGYWNRPEATAEAFIEI-------DGKRFFRTGDLGRMDEEGYFFITDRLKRMINASGFKVWPAEV 454 (546)
T ss_pred CCceEEEEECCchhccccCChhHhhhhhhhc-------CCCceEecCCEEEEcCCCcEEEEecchhhEEeCCEEECHHHH
Confidence 6789999999999999999988777766532 122599999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCC
Q psy4547 82 EVALRDYPVSR 92 (92)
Q Consensus 82 E~~l~~~~~V~ 92 (92)
|++|.+||.|.
T Consensus 455 E~~i~~~~~v~ 465 (546)
T PRK08314 455 ENLLYKHPAIQ 465 (546)
T ss_pred HHHHHhCcchh
Confidence 99999999873
No 62
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=99.86 E-value=1.3e-21 Score=132.18 Aligned_cols=82 Identities=26% Similarity=0.369 Sum_probs=74.7
Q ss_pred CCCceeEEEec---CcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEec
Q psy4547 1 MGTPGDIYIGG---PTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIE 77 (92)
Q Consensus 1 ~g~~Gel~v~~---~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~ 77 (92)
+|+.|||++++ +.++.|||++++.+.+.|..+ +||+|||+++++++|.++++||.+++||++|.+|+
T Consensus 363 ~g~~Gel~v~g~~~~~~~~gy~~~~~~~~~~~~~~----------g~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~i~ 432 (517)
T PRK08008 363 AGEIGEICIKGVPGKTIFKEYYLDPKATAKVLEAD----------GWLHTGDTGYVDEEGFFYFVDRRCNMIKRGGENVS 432 (517)
T ss_pred CCCcceEEEeCCCCcchhhhHhCChHHHhhcccCC----------CCeeccceEEECCCCcEEEeecccceEEeCCEEEC
Confidence 36789999997 689999999999887777544 69999999999999999999999999999999999
Q ss_pred hHHHHHHHhhCCCCC
Q psy4547 78 LQAIEVALRDYPVSR 92 (92)
Q Consensus 78 ~~~iE~~l~~~~~V~ 92 (92)
|.+||++|.+||.|+
T Consensus 433 p~~iE~~l~~~~~v~ 447 (517)
T PRK08008 433 CVELENIIATHPKIQ 447 (517)
T ss_pred HHHHHHHHHhCCcee
Confidence 999999999999874
No 63
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=99.86 E-value=1.5e-21 Score=133.15 Aligned_cols=82 Identities=29% Similarity=0.553 Sum_probs=75.0
Q ss_pred CCCceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHH
Q psy4547 1 MGTPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQA 80 (92)
Q Consensus 1 ~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~ 80 (92)
+|+.|||+++++.++.|||++++.+...|..+ +||+|||+++++++|.+++.||++++++++|.+|+|.+
T Consensus 403 ~g~~Gel~v~g~~~~~gY~~~~~~~~~~~~~~----------g~~~TGDl~~~~~~g~~~~~GR~~~~i~~~G~~i~p~~ 472 (557)
T PRK07059 403 LGEPGEICIRGPQVMAGYWNRPDETAKVMTAD----------GFFRTGDVGVMDERGYTKIVDRKKDMILVSGFNVYPNE 472 (557)
T ss_pred CCCceEEEEeCCccchhhhcCHHHHhhhcccC----------CceecCcEEEEcCCCcEEEecccccceEECCEEEcHHH
Confidence 36789999999999999999988777666544 69999999999999999999999999999999999999
Q ss_pred HHHHHhhCCCCC
Q psy4547 81 IEVALRDYPVSR 92 (92)
Q Consensus 81 iE~~l~~~~~V~ 92 (92)
||++|.+||.|+
T Consensus 473 iE~~l~~~~~V~ 484 (557)
T PRK07059 473 IEEVVASHPGVL 484 (557)
T ss_pred HHHHHHhCCcee
Confidence 999999999874
No 64
>PRK07787 acyl-CoA synthetase; Validated
Probab=99.86 E-value=2.4e-21 Score=129.90 Aligned_cols=79 Identities=38% Similarity=0.618 Sum_probs=73.0
Q ss_pred ceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEeccc-CCeEEEccEEechHHHH
Q psy4547 4 PGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRS-DTMVKIRGYTIELQAIE 82 (92)
Q Consensus 4 ~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~-~~~i~~~G~~v~~~~iE 82 (92)
+|||+++|+.++.||+++++.+.+.|..+ +||+|||+++++++|.+++.||. +++++.+|.+|+|.+||
T Consensus 321 ~Gei~v~g~~~~~gy~~~~~~t~~~~~~~----------~~~~TGDlg~~~~dg~l~~~GR~~d~~i~~~G~~v~~~eIE 390 (471)
T PRK07787 321 VGELQVRGPTLFDGYLNRPDATAAAFTAD----------GWFRTGDVAVVDPDGMHRIVGRESTDLIKSGGYRIGAGEIE 390 (471)
T ss_pred ceEEEEECcccchhhcCChhhchhcccCC----------CceecCceEEEcCCCCEEEeCCCCceeEeeCCEEECHHHHH
Confidence 79999999999999999998887777544 59999999999999999999996 89999999999999999
Q ss_pred HHHhhCCCCC
Q psy4547 83 VALRDYPVSR 92 (92)
Q Consensus 83 ~~l~~~~~V~ 92 (92)
++|.++|.|+
T Consensus 391 ~~l~~~~~v~ 400 (471)
T PRK07787 391 TALLGHPGVR 400 (471)
T ss_pred HHHHhCCCcc
Confidence 9999999874
No 65
>PRK07788 acyl-CoA synthetase; Validated
Probab=99.85 E-value=3e-21 Score=131.43 Aligned_cols=78 Identities=31% Similarity=0.396 Sum_probs=69.8
Q ss_pred CCCceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHH
Q psy4547 1 MGTPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQA 80 (92)
Q Consensus 1 ~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~ 80 (92)
+|++|||+++++.++.||++++.. ... .+||+|||+++++++|.++|.||+||+||++|.+|+|.+
T Consensus 399 ~g~~Gel~v~g~~~~~gY~~~~~~---~~~-----------~g~~~TGDl~~~~~~g~l~~~GR~dd~i~~~G~~v~p~e 464 (549)
T PRK07788 399 RGVVGRIFVGNGFPFEGYTDGRDK---QII-----------DGLLSSGDVGYFDEDGLLFVDGRDDDMIVSGGENVFPAE 464 (549)
T ss_pred CCCeEEEEEeCCCccccccCCCcc---ccc-----------CCceecCceEEEcCCCCEEEeccCcceEEECCEEECHHH
Confidence 378899999999999999987753 111 159999999999999999999999999999999999999
Q ss_pred HHHHHhhCCCCC
Q psy4547 81 IEVALRDYPVSR 92 (92)
Q Consensus 81 iE~~l~~~~~V~ 92 (92)
||++|.+||.|.
T Consensus 465 IE~~l~~~~~V~ 476 (549)
T PRK07788 465 VEDLLAGHPDVV 476 (549)
T ss_pred HHHHHHhCCCee
Confidence 999999999874
No 66
>PRK07514 malonyl-CoA synthase; Validated
Probab=99.85 E-value=2.5e-21 Score=130.27 Aligned_cols=81 Identities=25% Similarity=0.460 Sum_probs=74.8
Q ss_pred CCceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHHH
Q psy4547 2 GTPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQAI 81 (92)
Q Consensus 2 g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~i 81 (92)
|+.|||+++++.++.||+++++.+.+.|... +||+|||+++++++|.+++.||++++||++|.+|+|.+|
T Consensus 346 g~~Gel~i~~~~~~~gy~~~~~~~~~~~~~~----------~~~~TGDl~~~~~~g~~~~~GR~~~~i~~~G~~i~~~~I 415 (504)
T PRK07514 346 GEIGMIEVKGPNVFKGYWRMPEKTAEEFRAD----------GFFITGDLGKIDERGYVHIVGRGKDLIISGGYNVYPKEV 415 (504)
T ss_pred CCceEEEEecCCccccccCCchhhhhhcccC----------CCeeecceEEEcCCccEEEeccccceEEeCCeEECHHHH
Confidence 6789999999999999999998887777544 599999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCC
Q psy4547 82 EVALRDYPVSR 92 (92)
Q Consensus 82 E~~l~~~~~V~ 92 (92)
|++|.+++.|+
T Consensus 416 E~~l~~~~~v~ 426 (504)
T PRK07514 416 EGEIDELPGVV 426 (504)
T ss_pred HHHHHhCCCee
Confidence 99999999763
No 67
>PRK06839 acyl-CoA synthetase; Validated
Probab=99.85 E-value=1.9e-21 Score=130.52 Aligned_cols=81 Identities=26% Similarity=0.397 Sum_probs=73.4
Q ss_pred CCCceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHH
Q psy4547 1 MGTPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQA 80 (92)
Q Consensus 1 ~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~ 80 (92)
+|+.|||+++++.++.|||++++.+...+.+ +||+|||+++++++|.+++.||.+|+|+.+|.+|+|.+
T Consensus 340 ~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~-----------g~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 408 (496)
T PRK06839 340 VGEVGELLIRGPNVMKEYWNRPDATEETIQD-----------GWLCTGDLARVDEDGFVYIVGRKKEMIISGGENIYPLE 408 (496)
T ss_pred CCCceEEEEECCCcchhhcCChHHHHHHHcC-----------CCeeecceEEEcCCCcEEEeccccceEEECCEEECHHH
Confidence 3788999999999999999998876655532 59999999999999999999999999999999999999
Q ss_pred HHHHHhhCCCCC
Q psy4547 81 IEVALRDYPVSR 92 (92)
Q Consensus 81 iE~~l~~~~~V~ 92 (92)
||++|.++|.|.
T Consensus 409 iE~~l~~~~~v~ 420 (496)
T PRK06839 409 VEQVINKLSDVY 420 (496)
T ss_pred HHHHHHhCCCee
Confidence 999999999873
No 68
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=99.85 E-value=2.5e-21 Score=133.78 Aligned_cols=85 Identities=25% Similarity=0.412 Sum_probs=72.2
Q ss_pred CCCceeEEEecC---cccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEec
Q psy4547 1 MGTPGDIYIGGP---TLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIE 77 (92)
Q Consensus 1 ~g~~Gel~v~~~---~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~ 77 (92)
+|+.|||++++| +++.+||++++...+.+.... ..+||+|||+++++++|+++|+||+||+||++|++|+
T Consensus 435 ~g~~Gel~i~gp~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~TGDl~~~d~dG~l~i~GR~dd~i~~~G~ri~ 507 (629)
T PRK10524 435 PNEKGVLVIEGPLPPGCMQTVWGDDDRFVKTYWSLF-------GRQVYSTFDWGIRDADGYYFILGRTDDVINVAGHRLG 507 (629)
T ss_pred CCCcEEEEEcCCCChhhcCCccCChHHHHHhhhccC-------CCcEEEcCCcEEEcCCCcEEEEEEecCeEEeCCEEeC
Confidence 478899999997 578899998875544432211 1269999999999999999999999999999999999
Q ss_pred hHHHHHHHhhCCCCC
Q psy4547 78 LQAIEVALRDYPVSR 92 (92)
Q Consensus 78 ~~~iE~~l~~~~~V~ 92 (92)
|.|||++|.+||.|+
T Consensus 508 p~eIE~~l~~~p~V~ 522 (629)
T PRK10524 508 TREIEESISSHPAVA 522 (629)
T ss_pred HHHHHHHHHhCCCcc
Confidence 999999999999884
No 69
>PRK09192 acyl-CoA synthetase; Validated
Probab=99.85 E-value=2.9e-21 Score=132.42 Aligned_cols=79 Identities=30% Similarity=0.476 Sum_probs=70.1
Q ss_pred CCceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHHH
Q psy4547 2 GTPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQAI 81 (92)
Q Consensus 2 g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~i 81 (92)
|+.|||+++|+.++.|||++ +.+...+..+ +||+|||++++ ++|+++|+||.+|+||++|.+|+|.+|
T Consensus 409 g~~Gel~i~g~~~~~gY~~~-~~~~~~~~~d----------gw~~TGDlg~~-~~G~l~~~GR~dd~i~~~G~~v~p~eI 476 (579)
T PRK09192 409 RVVGHICVRGPSLMSGYFRD-EESQDVLAAD----------GWLDTGDLGYL-LDGYLYITGRAKDLIIINGRNIWPQDI 476 (579)
T ss_pred CCEEEEEecCCchhhhhcCC-ccccccccCC----------ceeeccceeeE-ECCEEEEEeccccEEEECCCccCHHHH
Confidence 56799999999999999998 4444444333 69999999999 999999999999999999999999999
Q ss_pred HHHHhhCCCCC
Q psy4547 82 EVALRDYPVSR 92 (92)
Q Consensus 82 E~~l~~~~~V~ 92 (92)
|++|++||.|.
T Consensus 477 E~~l~~~p~V~ 487 (579)
T PRK09192 477 EWIAEQEPELR 487 (579)
T ss_pred HHHHHhcCCcc
Confidence 99999999873
No 70
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=99.85 E-value=2.4e-21 Score=132.12 Aligned_cols=81 Identities=23% Similarity=0.400 Sum_probs=74.2
Q ss_pred CCceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHHH
Q psy4547 2 GTPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQAI 81 (92)
Q Consensus 2 g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~i 81 (92)
|+.|||+++++.++.|||++++.+.+.|..+ +||+|||+++++++|++++.||.+|+|+++|.+|+|.+|
T Consensus 406 g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~----------g~~~TGD~~~~~~~g~l~i~GR~~d~i~~~G~~v~p~ei 475 (560)
T PRK08751 406 GEIGELCIKGPQVMKGYWKRPEETAKVMDAD----------GWLHTGDIARMDEQGFVYIVDRKKDMILVSGFNVYPNEI 475 (560)
T ss_pred CCceEEEEecCccchhhcCChhhhhhccccC----------CCccccceEEEcCCceEEEEeechhheeECCEEEcHHHH
Confidence 6789999999999999999998777666433 699999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCC
Q psy4547 82 EVALRDYPVSR 92 (92)
Q Consensus 82 E~~l~~~~~V~ 92 (92)
|++|..||.|+
T Consensus 476 E~~l~~~~~v~ 486 (560)
T PRK08751 476 EDVIAMMPGVL 486 (560)
T ss_pred HHHHHhCcCee
Confidence 99999999873
No 71
>PRK07867 acyl-CoA synthetase; Validated
Probab=99.85 E-value=4.5e-21 Score=130.52 Aligned_cols=78 Identities=28% Similarity=0.455 Sum_probs=72.2
Q ss_pred ceeEEE-ecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHHHH
Q psy4547 4 PGDIYI-GGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQAIE 82 (92)
Q Consensus 4 ~Gel~v-~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~iE 82 (92)
.|||++ +++.++.|||++++.+...|.. +||+|||+++++++|.++|.||++|+|+++|.+|+|.+||
T Consensus 352 ~Gel~i~~g~~~~~gy~~~~~~~~~~~~~-----------g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~p~eIE 420 (529)
T PRK07867 352 IGELVNTAGPGGFEGYYNDPEADAERMRG-----------GVYWSGDLAYRDADGYAYFAGRLGDWMRVDGENLGTAPIE 420 (529)
T ss_pred ceEEEEecCCcccccccCChHhhhhhhcC-----------CeEeeccEEEEeCCCcEEEeccccCeEEECCEEeCHHHHH
Confidence 799998 9999999999999877766632 5999999999999999999999999999999999999999
Q ss_pred HHHhhCCCCC
Q psy4547 83 VALRDYPVSR 92 (92)
Q Consensus 83 ~~l~~~~~V~ 92 (92)
++|.+||.|.
T Consensus 421 ~~l~~~p~V~ 430 (529)
T PRK07867 421 RILLRYPDAT 430 (529)
T ss_pred HHHHhCCCee
Confidence 9999999874
No 72
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=99.85 E-value=4.8e-21 Score=130.50 Aligned_cols=80 Identities=30% Similarity=0.440 Sum_probs=72.2
Q ss_pred CCCceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHH
Q psy4547 1 MGTPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQA 80 (92)
Q Consensus 1 ~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~ 80 (92)
+|+.|||+++++.++.||+++++.+... .+ +||+|||+++++++|.+++.||.+++||++|.+|+|.+
T Consensus 389 ~g~~Gel~v~g~~~~~gY~~~~~~t~~~--~~----------g~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~p~~ 456 (547)
T PRK13295 389 AGQIGRLQVRGCSNFGGYLKRPQLNGTD--AD----------GWFDTGDLARIDADGYIRISGRSKDVIIRGGENIPVVE 456 (547)
T ss_pred CCCCCeEEEEcCcccccccCCccccccC--CC----------CCeecceEEEEcCCceEEEEeccCCeEEECCEEECHHH
Confidence 3678999999999999999998766543 11 59999999999999999999999999999999999999
Q ss_pred HHHHHhhCCCCC
Q psy4547 81 IEVALRDYPVSR 92 (92)
Q Consensus 81 iE~~l~~~~~V~ 92 (92)
||++|.+|+.|+
T Consensus 457 IE~~l~~~~~v~ 468 (547)
T PRK13295 457 IEALLYRHPAIA 468 (547)
T ss_pred HHHHHHhCCCee
Confidence 999999999874
No 73
>PRK08315 AMP-binding domain protein; Validated
Probab=99.85 E-value=3.1e-21 Score=131.32 Aligned_cols=82 Identities=24% Similarity=0.353 Sum_probs=74.1
Q ss_pred CCCceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHH
Q psy4547 1 MGTPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQA 80 (92)
Q Consensus 1 ~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~ 80 (92)
.|+.|||+++++.++.|||+++..+...+... +||+|||+++++++|.++|+||.+++++++|.+|++.+
T Consensus 395 ~g~~GEl~v~g~~~~~gy~~~~~~~~~~~~~~----------~~~~TGD~~~~~~dg~~~~~GR~d~~i~~~G~~v~~~e 464 (559)
T PRK08315 395 RGEQGELCTRGYSVMKGYWNDPEKTAEAIDAD----------GWMHTGDLAVMDEEGYVNIVGRIKDMIIRGGENIYPRE 464 (559)
T ss_pred CCCceEEEEECchhhhhhcCChhHHhhcCCCC----------CCEEccceEEEcCCceEEEEeeccceEEECCEEEcHHH
Confidence 36789999999999999999988776665333 59999999999999999999999999999999999999
Q ss_pred HHHHHhhCCCCC
Q psy4547 81 IEVALRDYPVSR 92 (92)
Q Consensus 81 iE~~l~~~~~V~ 92 (92)
||++|.++|.|.
T Consensus 465 IE~~l~~~~~v~ 476 (559)
T PRK08315 465 IEEFLYTHPKIQ 476 (559)
T ss_pred HHHHHHhCCCce
Confidence 999999999763
No 74
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=99.85 E-value=5.4e-21 Score=129.94 Aligned_cols=80 Identities=29% Similarity=0.446 Sum_probs=71.2
Q ss_pred CCCceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHH
Q psy4547 1 MGTPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQA 80 (92)
Q Consensus 1 ~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~ 80 (92)
+|+.|||+++++.++.|||++++.+. +. ..+||+|||+++++++|.++++||.+++|+++|.+|+|.+
T Consensus 387 ~g~~Gel~v~g~~~~~gy~~~~~~~~--~~----------~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~p~e 454 (538)
T TIGR03208 387 QGETGRLLVRGCSNFGGYLKRPHLNS--TD----------AEGWFDTGDLAFQDAEGYIRINGRSKDVIIRGGENIPVVE 454 (538)
T ss_pred CCCCcEEEEecCcccccccCCccccc--cc----------CCCceeccceEEECCCCcEEEEeccCceEEECCEEECHHH
Confidence 36789999999999999999887543 11 1269999999999999999999999999999999999999
Q ss_pred HHHHHhhCCCCC
Q psy4547 81 IEVALRDYPVSR 92 (92)
Q Consensus 81 iE~~l~~~~~V~ 92 (92)
||++|.+||.|+
T Consensus 455 IE~~l~~~~~v~ 466 (538)
T TIGR03208 455 IENLLYQHPAVA 466 (538)
T ss_pred HHHHHhcCccee
Confidence 999999999874
No 75
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=99.85 E-value=3.8e-21 Score=131.12 Aligned_cols=80 Identities=25% Similarity=0.441 Sum_probs=72.9
Q ss_pred CCceeEEEecC---cccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEech
Q psy4547 2 GTPGDIYIGGP---TLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIEL 78 (92)
Q Consensus 2 g~~Gel~v~~~---~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~ 78 (92)
|+.|||+++++ +++.||+++++.+...|.+ +||+|||+++++++|.++|.||.+|+|+++|.+|+|
T Consensus 367 g~~Gei~v~~~~~~~~~~GY~~~~~~~~~~~~~-----------~~~~TGD~~~~~~dG~l~i~GR~~d~i~~~G~~v~p 435 (542)
T PRK06155 367 GEPGELLLRADEPFAFATGYFGMPEKTVEAWRN-----------LWFHTGDRVVRDADGWFRFVDRIKDAIRRRGENISS 435 (542)
T ss_pred CCceEEEEecCCccccchhhcCCHHHHHHhhcC-----------CcEeccceEEEcCCceEEEEecCCCEEEeCCEEECH
Confidence 67899999998 6999999988877666632 599999999999999999999999999999999999
Q ss_pred HHHHHHHhhCCCCC
Q psy4547 79 QAIEVALRDYPVSR 92 (92)
Q Consensus 79 ~~iE~~l~~~~~V~ 92 (92)
.+||++|.+||.|+
T Consensus 436 ~eIE~~l~~~~~V~ 449 (542)
T PRK06155 436 FEVEQVLLSHPAVA 449 (542)
T ss_pred HHHHHHHHhCCCee
Confidence 99999999999874
No 76
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=99.85 E-value=3.9e-21 Score=132.15 Aligned_cols=87 Identities=22% Similarity=0.306 Sum_probs=73.8
Q ss_pred CCCceeEE--EecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEech
Q psy4547 1 MGTPGDIY--IGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIEL 78 (92)
Q Consensus 1 ~g~~Gel~--v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~ 78 (92)
+|+.|||+ ++++.++.|| +++..+...|....+ ..+.+||+|||+++++++|.+++.||.+|+||++|.+|+|
T Consensus 400 ~g~~Gel~~~i~~~~~~~GY-~~~~~t~~~~~~~~~----~~~~~~~~TGDlg~~~~dG~l~~~GR~~d~ik~~G~~i~p 474 (600)
T PRK08279 400 PGEVGLLIGRITDRGPFDGY-TDPEASEKKILRDVF----KKGDAWFNTGDLMRDDGFGHAQFVDRLGDTFRWKGENVAT 474 (600)
T ss_pred CCCceeEEEEecCccccccc-CCchhhHHHHhhccc----CCCCceEeecceEEEcCCccEEEecccCCeEEECCcccCH
Confidence 36789998 7789999999 777777766654321 1123699999999999999999999999999999999999
Q ss_pred HHHHHHHhhCCCCC
Q psy4547 79 QAIEVALRDYPVSR 92 (92)
Q Consensus 79 ~~iE~~l~~~~~V~ 92 (92)
.|||++|.+||.|.
T Consensus 475 ~eIE~~l~~~p~V~ 488 (600)
T PRK08279 475 TEVENALSGFPGVE 488 (600)
T ss_pred HHHHHHHhcCCCcc
Confidence 99999999999874
No 77
>PRK07470 acyl-CoA synthetase; Validated
Probab=99.85 E-value=3.6e-21 Score=130.37 Aligned_cols=81 Identities=30% Similarity=0.466 Sum_probs=73.7
Q ss_pred CCCceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHH
Q psy4547 1 MGTPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQA 80 (92)
Q Consensus 1 ~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~ 80 (92)
+|+.|||+++++.++.|||++++.+...|.+ +||+|||+++++++|++++.||.|++||++|.+|+|.+
T Consensus 363 ~g~~Gel~i~~~~~~~gy~~~~~~~~~~~~~-----------~~~~TGDl~~~~~~g~l~~~GR~dd~i~~~G~~v~~~~ 431 (528)
T PRK07470 363 PGETGEICVIGPAVFAGYYNNPEANAKAFRD-----------GWFRTGDLGHLDARGFLYITGRASDMYISGGSNVYPRE 431 (528)
T ss_pred CCCceEEEEeCCccchhhcCCHHHHHhhhcC-----------CcEecceeEEEccCCeEEEeCCccceEEeCCEEECHHH
Confidence 3678999999999999999998877666532 59999999999999999999999999999999999999
Q ss_pred HHHHHhhCCCCC
Q psy4547 81 IEVALRDYPVSR 92 (92)
Q Consensus 81 iE~~l~~~~~V~ 92 (92)
||++|.++|.|+
T Consensus 432 IE~~l~~~~~v~ 443 (528)
T PRK07470 432 IEEKLLTHPAVS 443 (528)
T ss_pred HHHHHHhCCCce
Confidence 999999999874
No 78
>KOG1256|consensus
Probab=99.85 E-value=1.4e-21 Score=134.82 Aligned_cols=80 Identities=25% Similarity=0.439 Sum_probs=75.1
Q ss_pred CCceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEE-ccEEechHH
Q psy4547 2 GTPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKI-RGYTIELQA 80 (92)
Q Consensus 2 g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~-~G~~v~~~~ 80 (92)
|..||||++|+.++.||+++|+.|.+.+..+ +|++|||+|+++++|.|.+.||.++++|+ .|++|.|..
T Consensus 496 ~~~GEIcirG~~Vf~GYyK~p~~T~e~ideD----------GWLhTGDiG~~~p~G~l~IidRkK~ifklaqGEyVaPe~ 565 (691)
T KOG1256|consen 496 GSKGEICVRGPNVFMGYYKDPEKTAEAIDED----------GWLHTGDIGEWDPNGTLKIIDRKKNIFKLAQGEYVAPEK 565 (691)
T ss_pred CCcceEEEecchhceeccCChHHHhhhhccc----------cccccccceeECCCccEEEEecccceEEcCCCCccChHH
Confidence 4579999999999999999999999999777 79999999999999999999999999999 999999999
Q ss_pred HHHHHhhCCCC
Q psy4547 81 IEVALRDYPVS 91 (92)
Q Consensus 81 iE~~l~~~~~V 91 (92)
||++..+.+.|
T Consensus 566 IEniy~~~~~V 576 (691)
T KOG1256|consen 566 IENIYKRSLPV 576 (691)
T ss_pred HHHHHhcCCce
Confidence 99999887655
No 79
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=99.84 E-value=3.7e-21 Score=128.87 Aligned_cols=80 Identities=31% Similarity=0.480 Sum_probs=73.5
Q ss_pred CCceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHHH
Q psy4547 2 GTPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQAI 81 (92)
Q Consensus 2 g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~i 81 (92)
|+.|||++++|.++.||+++++.+...|.+ +||+|||+++++++|.+++.||+++++|++|.+|++.+|
T Consensus 330 g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~-----------~~~~tGDl~~~~~~g~l~~~GR~~~~i~~~G~~v~~~~i 398 (483)
T PRK03640 330 FEEGEIVVKGPNVTKGYLNREDATRETFQD-----------GWFKTGDIGYLDEEGFLYVLDRRSDLIISGGENIYPAEI 398 (483)
T ss_pred CCceEEEEECcchhhhhcCCHHHHHHHHhc-----------CCeeccceEEEcCCCCEEEeecccCeEEeCCEEECHHHH
Confidence 678999999999999999998877666643 599999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCC
Q psy4547 82 EVALRDYPVSR 92 (92)
Q Consensus 82 E~~l~~~~~V~ 92 (92)
|+.+.+++.|+
T Consensus 399 e~~i~~~~~v~ 409 (483)
T PRK03640 399 EEVLLSHPGVA 409 (483)
T ss_pred HHHHHhCCCee
Confidence 99999999874
No 80
>PRK12582 acyl-CoA synthetase; Provisional
Probab=99.84 E-value=3e-21 Score=133.49 Aligned_cols=81 Identities=21% Similarity=0.328 Sum_probs=71.0
Q ss_pred CCceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEE-e---cCCcEEEecccCCeEEE-ccEEe
Q psy4547 2 GTPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYA-L---GDGTFEVIGRSDTMVKI-RGYTI 76 (92)
Q Consensus 2 g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~-~---~~g~l~~~gR~~~~i~~-~G~~v 76 (92)
|++|||+++||.++.|||++++.+.+.|..+ +||+|||++++ | ++|+++|+||++|+|++ +|.+|
T Consensus 421 G~~GEl~vrg~~v~~GY~~~p~~t~~~f~~d----------gw~~TGDlg~~~d~~~~~g~l~i~GR~~d~i~~~~G~~i 490 (624)
T PRK12582 421 GDKYEVRVKGPNVTPGYHKDPELTAAAFDEE----------GFYRLGDAARFVDPDDPEKGLIFDGRVAEDFKLSTGTWV 490 (624)
T ss_pred CCceEEEEECCcccccccCCccchhhhcCcc----------CCccccceEEecCCcCCCCceEEeccchhhEecCCCcEe
Confidence 7889999999999999999999888777543 69999999998 4 46999999999999996 79999
Q ss_pred chHHHH--HHHhhCCCCC
Q psy4547 77 ELQAIE--VALRDYPVSR 92 (92)
Q Consensus 77 ~~~~iE--~~l~~~~~V~ 92 (92)
+|.+|| .++.+||.|.
T Consensus 491 ~p~~iE~e~~l~~~p~V~ 508 (624)
T PRK12582 491 SVGTLRPDAVAACSPVIH 508 (624)
T ss_pred chHHHHHHHHHhcCcchh
Confidence 998885 6778999874
No 81
>PRK06178 acyl-CoA synthetase; Validated
Probab=99.84 E-value=7e-21 Score=130.04 Aligned_cols=80 Identities=28% Similarity=0.490 Sum_probs=73.1
Q ss_pred CCceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHHH
Q psy4547 2 GTPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQAI 81 (92)
Q Consensus 2 g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~i 81 (92)
|++|||+++||.++.|||++++.+...|.+ +||+|||+++++++|.++|+||++|+|+++|.+|+|.+|
T Consensus 412 g~~Gel~v~g~~v~~gY~~~~~~~~~~~~d-----------g~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~i~~~ei 480 (567)
T PRK06178 412 GAEGEIVVRTPSLLKGYWNKPEATAEALRD-----------GWLHTGDIGKIDEQGFLHYLGRRKEMLKVNGMSVFPSEV 480 (567)
T ss_pred CCceEEEEECCcccccccCChhhhhhcccC-----------CceeecceEEEecCCeEEEEecccccEEECCEEECHHHH
Confidence 678999999999999999998877665532 599999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCC
Q psy4547 82 EVALRDYPVSR 92 (92)
Q Consensus 82 E~~l~~~~~V~ 92 (92)
|++|.+++.|.
T Consensus 481 E~~l~~~~~v~ 491 (567)
T PRK06178 481 EALLGQHPAVL 491 (567)
T ss_pred HHHHHhCCCee
Confidence 99999999874
No 82
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=99.84 E-value=1e-20 Score=132.59 Aligned_cols=87 Identities=22% Similarity=0.334 Sum_probs=67.6
Q ss_pred CCceeEEEecCcccccccCC--CcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechH
Q psy4547 2 GTPGDIYIGGPTLAIGYLNR--PDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQ 79 (92)
Q Consensus 2 g~~Gel~v~~~~~~~gy~~~--~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~ 79 (92)
++.|||+++|+.++.|||++ ++.+...+...... ....+||+|||++++|++|+++|.||++|+||++|++|+|.
T Consensus 551 ~~~Gel~v~g~~v~~GY~~~e~~~~~~~~~~~~~~~---~~~~gw~~TGDlg~~d~dG~l~i~GR~~d~I~~~G~~V~p~ 627 (718)
T PRK08043 551 EQGGRLQLKGPNIMNGYLRVEKPGVLEVPTAENARG---EMERGWYDTGDIVRFDEQGFVQIQGRAKRFAKIAGEMVSLE 627 (718)
T ss_pred CCceEEEEecCCccccccCCCCcccccccccccccc---cccCCeEecCCEEEEcCCCcEEEEecCCCeeEeCcEEcCHH
Confidence 35699999999999999984 33211111100000 01126999999999999999999999999999999999999
Q ss_pred HHHHHHhhCCCC
Q psy4547 80 AIEVALRDYPVS 91 (92)
Q Consensus 80 ~iE~~l~~~~~V 91 (92)
|||++|.+|+.+
T Consensus 628 eIE~~l~~~~~~ 639 (718)
T PRK08043 628 MVEQLALGVSPD 639 (718)
T ss_pred HHHHHHHhCCcc
Confidence 999999998754
No 83
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=99.84 E-value=8e-21 Score=129.19 Aligned_cols=80 Identities=34% Similarity=0.598 Sum_probs=73.7
Q ss_pred CCceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHHH
Q psy4547 2 GTPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQAI 81 (92)
Q Consensus 2 g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~i 81 (92)
|+.|||+++++.++.|||++++.+.+.|.. +||+|||+++++++|+++|.||.+++||++|.+|+|.+|
T Consensus 391 g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~-----------~~~~TGD~~~~~~~g~l~i~GR~~~~i~~~G~~i~~~eI 459 (541)
T TIGR03205 391 GEVGELRIRGPNVTRGYWNRPEESAEAFVG-----------DRFLTGDIGYMDTDGYFFLVDRKKDMIISGGFNVYPQMI 459 (541)
T ss_pred CCeeEEEEecCCccccccCChhhhHhhhcc-----------CCcccCceEEEcCCceEEEEccccCeEEECCEEECHHHH
Confidence 678999999999999999998877776643 499999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCC
Q psy4547 82 EVALRDYPVSR 92 (92)
Q Consensus 82 E~~l~~~~~V~ 92 (92)
|+.|.+|+.|.
T Consensus 460 E~~l~~~~~v~ 470 (541)
T TIGR03205 460 EQAIYEHPGVQ 470 (541)
T ss_pred HHHHHhCCCee
Confidence 99999999874
No 84
>PRK12583 acyl-CoA synthetase; Provisional
Probab=99.84 E-value=8.3e-21 Score=129.11 Aligned_cols=81 Identities=26% Similarity=0.359 Sum_probs=73.5
Q ss_pred CCceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHHH
Q psy4547 2 GTPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQAI 81 (92)
Q Consensus 2 g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~i 81 (92)
|+.|||+++++.++.||++++..+...+... +||+|||+++++++|++++.||.+++|+++|.+|+|.+|
T Consensus 397 g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~----------~~~~TGDl~~~~~dg~l~i~GR~~~~i~~~G~~v~~~~I 466 (558)
T PRK12583 397 GEIGELCTRGYSVMKGYWNNPEATAESIDED----------GWMHTGDLATMDEQGYVRIVGRSKDMIIRGGENIYPREI 466 (558)
T ss_pred CCeeEEEEEeCccchhhcCChHHHHhhcCCC----------CCeeccceEEECCCccEEEEecccceeEECCEEeCHHHH
Confidence 6789999999999999999988776655332 699999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCC
Q psy4547 82 EVALRDYPVSR 92 (92)
Q Consensus 82 E~~l~~~~~V~ 92 (92)
|++|.+||.|.
T Consensus 467 E~~l~~~~~v~ 477 (558)
T PRK12583 467 EEFLFTHPAVA 477 (558)
T ss_pred HHHHHhCCCee
Confidence 99999999873
No 85
>PRK08162 acyl-CoA synthetase; Validated
Probab=99.84 E-value=6.7e-21 Score=129.46 Aligned_cols=78 Identities=26% Similarity=0.397 Sum_probs=72.5
Q ss_pred ceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHHHHH
Q psy4547 4 PGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQAIEV 83 (92)
Q Consensus 4 ~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~iE~ 83 (92)
.|||+++++.++.|||++++.+...|.. +||+|||++++|++|.++|.||.++++|++|.+|+|.+||+
T Consensus 388 ~Gel~v~g~~~~~gY~~~~~~~~~~~~~-----------g~~~TGDl~~~d~dg~l~~~GR~~~~i~~~G~~v~~~eIE~ 456 (545)
T PRK08162 388 IGEIMFRGNIVMKGYLKNPKATEEAFAG-----------GWFHTGDLAVLHPDGYIKIKDRSKDIIISGGENISSIEVED 456 (545)
T ss_pred eeEEEEecCcchhhhcCChhhhHHHhhC-----------CCcccCceEEEcCCccEEEEecccceEEeCCEEECHHHHHH
Confidence 5999999999999999999887777643 59999999999999999999999999999999999999999
Q ss_pred HHhhCCCCC
Q psy4547 84 ALRDYPVSR 92 (92)
Q Consensus 84 ~l~~~~~V~ 92 (92)
.|.+||.|.
T Consensus 457 ~l~~~~~v~ 465 (545)
T PRK08162 457 VLYRHPAVL 465 (545)
T ss_pred HHHhCCccc
Confidence 999999874
No 86
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.84 E-value=6.7e-21 Score=130.51 Aligned_cols=91 Identities=19% Similarity=0.222 Sum_probs=74.9
Q ss_pred CCceeEEEecCcccccccCCCccc----ccccccCCccccc--ccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEE
Q psy4547 2 GTPGDIYIGGPTLAIGYLNRPDLN----KMRFISTPEHLRK--TCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYT 75 (92)
Q Consensus 2 g~~Gel~v~~~~~~~gy~~~~~~~----~~~~~~~~~~~~~--~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~ 75 (92)
+..|||+++|+.++.|||++++.+ ...|...+.+... ....+||+|||+++++++|.++|.||.+++|+++|.+
T Consensus 383 ~~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~f~~~~~~~~~~~~~~~g~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~ 462 (576)
T PRK05620 383 RNEGEIQVRGNWVTASYYHSPTEEGGGAASTFRGEDVEDANDRFTADGWLRTGDVGSVTRDGFLTIHDRARDVIRSGGEW 462 (576)
T ss_pred CCceEEEEEcCcccccccCCccccccccccccccccchhhhcccccCCcEecCceEEEcCCceEEEEechhhhhhcCCEE
Confidence 467999999999999999998876 4444433322111 0123699999999999999999999999999999999
Q ss_pred echHHHHHHHhhCCCCC
Q psy4547 76 IELQAIEVALRDYPVSR 92 (92)
Q Consensus 76 v~~~~iE~~l~~~~~V~ 92 (92)
|++.+||++|.+||.|+
T Consensus 463 i~~~eIE~~l~~~p~v~ 479 (576)
T PRK05620 463 IYSAQLENYIMAAPEVV 479 (576)
T ss_pred EcHHHHHHHHhcCCCce
Confidence 99999999999999874
No 87
>PRK13391 acyl-CoA synthetase; Provisional
Probab=99.84 E-value=1.5e-20 Score=127.07 Aligned_cols=82 Identities=28% Similarity=0.339 Sum_probs=73.1
Q ss_pred CCCceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHH
Q psy4547 1 MGTPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQA 80 (92)
Q Consensus 1 ~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~ 80 (92)
+|+.|||+++++ ++.+||++++.+...+..+ .+||+|||+++++++|.++|.||.++++|++|.+|++.+
T Consensus 350 ~g~~Gel~~~g~-~~~gy~~~~~~~~~~~~~~---------~~w~~TGD~g~~~~~g~l~~~gR~~~~i~~~G~~v~~~e 419 (511)
T PRK13391 350 PGEPGTIWFEGG-RPFEYLNDPAKTAEARHPD---------GTWSTVGDIGYVDEDGYLYLTDRAAFMIISGGVNIYPQE 419 (511)
T ss_pred CCCceEEEEecC-cceEEcCChhHhHHhhccC---------CCEEecCCEEEECCCccEEEeccCCCEEEeCCEEECHHH
Confidence 367899999999 8889999888776665432 169999999999999999999999999999999999999
Q ss_pred HHHHHhhCCCCC
Q psy4547 81 IEVALRDYPVSR 92 (92)
Q Consensus 81 iE~~l~~~~~V~ 92 (92)
||++|.+||.|.
T Consensus 420 ie~~l~~~~~v~ 431 (511)
T PRK13391 420 AENLLITHPKVA 431 (511)
T ss_pred HHHHHHhCCCcc
Confidence 999999999873
No 88
>KOG1175|consensus
Probab=99.84 E-value=6.7e-21 Score=131.06 Aligned_cols=82 Identities=24% Similarity=0.331 Sum_probs=69.9
Q ss_pred CceeEEEec--C-cccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechH
Q psy4547 3 TPGDIYIGG--P-TLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQ 79 (92)
Q Consensus 3 ~~Gel~v~~--~-~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~ 79 (92)
+.|+|+++. | +++++||++++. |.+.++...+ ++|.|||.+++|++|+++++||.||+||++|++++++
T Consensus 440 ~~G~l~~~~~~P~~~~r~~~~n~er----f~~~yf~k~p----g~y~tGD~~~rd~dGY~~i~GR~DDviNvsGhRigta 511 (626)
T KOG1175|consen 440 GNGELRLKPPWPPGMFRTLWGNHER----FRAAYFKKFP----GYYFTGDGGRRDEDGYYWILGRVDDVINVSGHRIGTA 511 (626)
T ss_pred ceeEEEEeCCCCccccccccCCHHH----hhhhhcccCC----ceEEecCceEEcCCceEEEEecccccccccceeecHH
Confidence 679999986 4 889999999983 3333222112 7999999999999999999999999999999999999
Q ss_pred HHHHHHhhCCCCC
Q psy4547 80 AIEVALRDYPVSR 92 (92)
Q Consensus 80 ~iE~~l~~~~~V~ 92 (92)
|||++|.+||.|.
T Consensus 512 EIE~al~~hp~Va 524 (626)
T KOG1175|consen 512 EIESALVEHPAVA 524 (626)
T ss_pred HHHHHHhhCcchh
Confidence 9999999999884
No 89
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.83 E-value=9.6e-21 Score=129.30 Aligned_cols=80 Identities=29% Similarity=0.501 Sum_probs=73.2
Q ss_pred CCceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHHH
Q psy4547 2 GTPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQAI 81 (92)
Q Consensus 2 g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~i 81 (92)
|+.|||+++++.++.+|+++++.+...+.+ +||+|||+++++++|.+++.||++++|+++|.+|+|.+|
T Consensus 401 g~~Gel~v~g~~~~~gY~~~~~~~~~~~~~-----------g~~~TGD~~~~~~~g~~~~~GR~dd~i~~~G~~v~p~ei 469 (563)
T PRK06710 401 GEIGEIVVKGPQIMKGYWNKPEETAAVLQD-----------GWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREV 469 (563)
T ss_pred CCceEEEEecCccchhhhCChHHHhhhccc-----------CcccccceEEEcCCCcEEEeeccccEEEECCEEECHHHH
Confidence 678999999999999999998877665532 599999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCC
Q psy4547 82 EVALRDYPVSR 92 (92)
Q Consensus 82 E~~l~~~~~V~ 92 (92)
|++|.+||.|.
T Consensus 470 E~~l~~~~~v~ 480 (563)
T PRK06710 470 EEVLYEHEKVQ 480 (563)
T ss_pred HHHHHhCccee
Confidence 99999999874
No 90
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.83 E-value=1.2e-20 Score=128.99 Aligned_cols=80 Identities=26% Similarity=0.529 Sum_probs=73.4
Q ss_pred CCceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHHH
Q psy4547 2 GTPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQAI 81 (92)
Q Consensus 2 g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~i 81 (92)
|+.|||+++++.++.||+++++.+...|.. +||+|||+++++++|.++|.||.+|++|++|.+|+|.+|
T Consensus 415 g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~-----------g~~~TGD~~~~~~~g~l~i~gR~dd~i~~~G~~v~p~eI 483 (573)
T PRK05605 415 GEEGELLVRGPQVFKGYWNRPEETAKSFLD-----------GWFRTGDVVVMEEDGFIRIVDRIKELIITGGFNVYPAEV 483 (573)
T ss_pred CCeeEEEEecCchhhhhcCChhHhhhcccC-----------CCcccCCEEEEcCCCcEEEEeccccceeeCCEEECHHHH
Confidence 567999999999999999998877766643 499999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCC
Q psy4547 82 EVALRDYPVSR 92 (92)
Q Consensus 82 E~~l~~~~~V~ 92 (92)
|++|.+|+.|+
T Consensus 484 E~~l~~~~~i~ 494 (573)
T PRK05605 484 EEVLREHPGVE 494 (573)
T ss_pred HHHHHhCcccc
Confidence 99999999874
No 91
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.83 E-value=2.2e-20 Score=135.62 Aligned_cols=80 Identities=25% Similarity=0.397 Sum_probs=68.5
Q ss_pred CCceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHHH
Q psy4547 2 GTPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQAI 81 (92)
Q Consensus 2 g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~i 81 (92)
|+.|||+++|+.++.|||+++.... +.. ...+||+|||++++|+||++++.||.||+||++|++|+|.||
T Consensus 979 ~~~Gel~v~g~~~~~gY~~~~~~~~--~~~--------~~~g~~~TGDl~~~d~dG~l~~~GR~~d~i~~~G~~v~~~eI 1048 (1140)
T PRK06814 979 DEGGRLFVRGPNVMLGYLRAENPGV--LEP--------PADGWYDTGDIVTIDEEGFITIKGRAKRFAKIAGEMISLAAV 1048 (1140)
T ss_pred CCceEEEEeCCCcchhhcCCCCCCc--ccc--------CCCCeEecCCEEEECCCCeEEEEecccCeeeeCCEEECHHHH
Confidence 5779999999999999998754221 111 112699999999999999999999999999999999999999
Q ss_pred HHHHhhCCCC
Q psy4547 82 EVALRDYPVS 91 (92)
Q Consensus 82 E~~l~~~~~V 91 (92)
|++|.+|+.|
T Consensus 1049 E~~l~~~~~v 1058 (1140)
T PRK06814 1049 EELAAELWPD 1058 (1140)
T ss_pred HHHHHhcCCc
Confidence 9999999876
No 92
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=99.83 E-value=6.8e-21 Score=129.58 Aligned_cols=82 Identities=24% Similarity=0.400 Sum_probs=74.3
Q ss_pred CCCceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHH
Q psy4547 1 MGTPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQA 80 (92)
Q Consensus 1 ~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~ 80 (92)
+|+.|||+++|+.++.|||++++.+...+... +||+|||+++++++|.+++.||.+++|+++|.+|+|.+
T Consensus 378 ~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~----------g~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~v~p~~ 447 (547)
T PRK06087 378 PGCEGEEASRGPNVFMGYLDEPELTARALDEE----------GWYYSGDLCRMDEAGYIKITGRKKDIIVRGGENISSRE 447 (547)
T ss_pred CCCcceEEEecccccccccCCHHHHHHHhCCC----------CCcCcCceEEECCCCCEEEEecchhhhhcCCEEECHHH
Confidence 36789999999999999999988776665433 59999999999999999999999999999999999999
Q ss_pred HHHHHhhCCCCC
Q psy4547 81 IEVALRDYPVSR 92 (92)
Q Consensus 81 iE~~l~~~~~V~ 92 (92)
||++|.++|.|+
T Consensus 448 iE~~l~~~~~v~ 459 (547)
T PRK06087 448 VEDILLQHPKIH 459 (547)
T ss_pred HHHHHHhCCCee
Confidence 999999999874
No 93
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.83 E-value=1.2e-20 Score=128.36 Aligned_cols=80 Identities=28% Similarity=0.392 Sum_probs=73.9
Q ss_pred CCceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHHH
Q psy4547 2 GTPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQAI 81 (92)
Q Consensus 2 g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~i 81 (92)
|+.|||+++|+.+++||+++++.+...|.. +||+|||+++++++|.++++||.+++||++|.+|++.+|
T Consensus 369 g~~Gel~v~g~~~~~gy~~~~~~~~~~f~~-----------~~~~TGDl~~~~~~g~~~i~GR~~d~i~~~G~~v~~~ei 437 (542)
T PRK07786 369 GEVGEIVYRAPTLMSGYWNNPEATAEAFAG-----------GWFHSGDLVRQDEEGYVWVVDRKKDMIISGGENIYCAEV 437 (542)
T ss_pred CCceEEEEEChhhhhhhcCCHHHHHHHhhC-----------CcccccceEEEcCCceEEEEecccceEEeCCEEECHHHH
Confidence 678999999999999999999887776642 599999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCC
Q psy4547 82 EVALRDYPVSR 92 (92)
Q Consensus 82 E~~l~~~~~V~ 92 (92)
|++|.+||.|+
T Consensus 438 E~~l~~~~~v~ 448 (542)
T PRK07786 438 ENVLASHPDIV 448 (542)
T ss_pred HHHHHhCCCcc
Confidence 99999999874
No 94
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.82 E-value=2.6e-20 Score=125.45 Aligned_cols=81 Identities=26% Similarity=0.314 Sum_probs=74.6
Q ss_pred CCceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHHH
Q psy4547 2 GTPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQAI 81 (92)
Q Consensus 2 g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~i 81 (92)
|+.|||+++++.++.+||++++.+...+..+ +||+|||+++++++|.+++.||.++++|++|.+|++.+|
T Consensus 338 g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~----------~~~~TGD~~~~~~~g~~~~~GR~~~~i~~~G~~v~~~~i 407 (502)
T PRK08276 338 GEIGTVYFEMDGYPFEYHNDPEKTAAARNPH----------GWVTVGDVGYLDEDGYLYLTDRKSDMIISGGVNIYPQEI 407 (502)
T ss_pred CCceEEEEECCCccchhcCCHHHHHHHhcCC----------CceeecceEEEcCCcCEEEeccCcceEEeCCEEeCHHHH
Confidence 6789999999999999999988777777654 599999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCC
Q psy4547 82 EVALRDYPVSR 92 (92)
Q Consensus 82 E~~l~~~~~V~ 92 (92)
|.+|.+||.|.
T Consensus 408 E~~i~~~~~v~ 418 (502)
T PRK08276 408 ENLLVTHPKVA 418 (502)
T ss_pred HHHHHhCCCcc
Confidence 99999999863
No 95
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.82 E-value=2.2e-20 Score=125.66 Aligned_cols=81 Identities=22% Similarity=0.466 Sum_probs=73.0
Q ss_pred CCceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHHH
Q psy4547 2 GTPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQAI 81 (92)
Q Consensus 2 g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~i 81 (92)
|+.|||+++++.++.||++++..+...+..+ +||+|||+++++++|.+++.||.+|+|+++|.++++.+|
T Consensus 361 g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~----------~~~~tGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~i 430 (513)
T PRK07656 361 GEVGELLVRGPNVMKGYYDDPEATAAAIDAD----------GWLHTGDLGRLDEEGYLYIVDRKKDMFIVGGFNVYPAEV 430 (513)
T ss_pred CCceEEEEEcchhhhhhcCCHHHHhhhhccC----------CceeccceEEEcCCeeEEEEecccceEEeCCEEeCHHHH
Confidence 6789999999999999999887666555322 599999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCC
Q psy4547 82 EVALRDYPVSR 92 (92)
Q Consensus 82 E~~l~~~~~V~ 92 (92)
|++|.+++.|.
T Consensus 431 E~~l~~~~~i~ 441 (513)
T PRK07656 431 EEVLYEHPAVA 441 (513)
T ss_pred HHHHHhCCCee
Confidence 99999999863
No 96
>PRK13382 acyl-CoA synthetase; Provisional
Probab=99.82 E-value=4e-20 Score=125.94 Aligned_cols=77 Identities=29% Similarity=0.429 Sum_probs=67.5
Q ss_pred CCceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHHH
Q psy4547 2 GTPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQAI 81 (92)
Q Consensus 2 g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~i 81 (92)
|+.|||++++|.++.||+ ++.+. .+. + +||+|||+++++++|+++|.||++|+||++|.+|+|.+|
T Consensus 389 g~~GEl~v~g~~~~~gY~--~~~~~-~~~-~----------g~~~TGDl~~~~~~g~l~~~GR~dd~ik~~G~~v~~~eI 454 (537)
T PRK13382 389 GEVGTIFVRNDTQFDGYT--SGSTK-DFH-D----------GFMASGDVGYLDENGRLFVVGRDDEMIVSGGENVYPIEV 454 (537)
T ss_pred CCeeEEEEEcCCcccCcc--ccchh-hcc-C----------CCEeeCceEEEeCCCcEEEeccccceeEECCEEECHHHH
Confidence 678999999999999998 33222 222 1 599999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCC
Q psy4547 82 EVALRDYPVSR 92 (92)
Q Consensus 82 E~~l~~~~~V~ 92 (92)
|++|.+||.|.
T Consensus 455 E~~l~~~~~V~ 465 (537)
T PRK13382 455 EKTLATHPDVA 465 (537)
T ss_pred HHHHHhCCCEe
Confidence 99999999874
No 97
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=99.82 E-value=5.7e-20 Score=123.45 Aligned_cols=83 Identities=41% Similarity=0.689 Sum_probs=74.3
Q ss_pred CCceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHHH
Q psy4547 2 GTPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQAI 81 (92)
Q Consensus 2 g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~i 81 (92)
|+.|||+++++.++.|||++++.+...|... .+.+||+|||++++ ++|++++.||.+|+|+++|.+|+|.+|
T Consensus 342 g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~-------~g~~~~~tGD~~~~-~~g~~~~~GR~~d~i~~~G~~v~~~~i 413 (503)
T PRK04813 342 GEQGEIVISGPSVSKGYLNNPEKTAEAFFTF-------DGQPAYHTGDAGYL-EDGLLFYQGRIDFQIKLNGYRIELEEI 413 (503)
T ss_pred CCceEEEEeccccccccCCChhHhHHhhccC-------CCceeEECCceEEe-eCCeEEEeccccceEEECcEEeCHHHH
Confidence 6789999999999999999998777766442 12369999999999 999999999999999999999999999
Q ss_pred HHHHhhCCCCC
Q psy4547 82 EVALRDYPVSR 92 (92)
Q Consensus 82 E~~l~~~~~V~ 92 (92)
|+.|.+||.|+
T Consensus 414 E~~l~~~~~v~ 424 (503)
T PRK04813 414 EQNLRQSSYVE 424 (503)
T ss_pred HHHHHhCCCcc
Confidence 99999999874
No 98
>PRK08316 acyl-CoA synthetase; Validated
Probab=99.82 E-value=2.4e-20 Score=125.79 Aligned_cols=80 Identities=28% Similarity=0.502 Sum_probs=73.3
Q ss_pred CCceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHHH
Q psy4547 2 GTPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQAI 81 (92)
Q Consensus 2 g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~i 81 (92)
|+.|||+++++.++.+|+++++.+...|.. +||+|||+++++++|.+++.||.+++|+++|.+|+|.+|
T Consensus 365 g~~Gei~v~~~~~~~~y~~~~~~~~~~~~~-----------~~~~TGDl~~~~~~g~l~i~gR~~~~i~~~G~~i~~~~i 433 (523)
T PRK08316 365 GEVGEIVHRSPQLMLGYWDDPEKTAEAFRG-----------GWFHSGDLGVMDEEGYITVVDRKKDMIKTGGENVASREV 433 (523)
T ss_pred CCcceEEEECCchhhhhcCCHHHHHHHhhC-----------CCeeccceEEEcCCceEEEecccccEEEeCCeEECHHHH
Confidence 678999999999999999998877766632 599999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCC
Q psy4547 82 EVALRDYPVSR 92 (92)
Q Consensus 82 E~~l~~~~~V~ 92 (92)
|+.|.+++.|+
T Consensus 434 E~~l~~~~~v~ 444 (523)
T PRK08316 434 EEALYTHPAVA 444 (523)
T ss_pred HHHHHhCCChh
Confidence 99999998873
No 99
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.82 E-value=6.6e-20 Score=124.72 Aligned_cols=81 Identities=26% Similarity=0.298 Sum_probs=69.2
Q ss_pred CCCceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHH
Q psy4547 1 MGTPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQA 80 (92)
Q Consensus 1 ~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~ 80 (92)
+|++|||+++++.+++|||+.+.... .+. ..+||+|||+++++++|.++|+||.+|+||++|.+|++.+
T Consensus 383 ~g~~Gel~v~~~~~~~gy~~~~~~~~-~~~----------~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~e 451 (545)
T PRK07768 383 PRGVGVIELRGESVTPGYLTMDGFIP-AQD----------ADGWLDTGDLGYLTEEGEVVVCGRVKDVIIMAGRNIYPTD 451 (545)
T ss_pred CCCEEEEEEccCcccccccCCCCCcc-ccc----------CCCeeeccceEEEecCCEEEEEccccceEEECCEecCHHH
Confidence 36789999999999999997543221 111 1259999999999999999999999999999999999999
Q ss_pred HHHHHhhCCCCC
Q psy4547 81 IEVALRDYPVSR 92 (92)
Q Consensus 81 iE~~l~~~~~V~ 92 (92)
||+.|.+||.|.
T Consensus 452 iE~~l~~~~~v~ 463 (545)
T PRK07768 452 IERAAARVEGVR 463 (545)
T ss_pred HHHHHHhCcccc
Confidence 999999999874
No 100
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=99.82 E-value=1.2e-20 Score=130.25 Aligned_cols=81 Identities=20% Similarity=0.276 Sum_probs=70.2
Q ss_pred CCceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEE----ecCCcEEEecccCCeEEE-ccEEe
Q psy4547 2 GTPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYA----LGDGTFEVIGRSDTMVKI-RGYTI 76 (92)
Q Consensus 2 g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~----~~~g~l~~~gR~~~~i~~-~G~~v 76 (92)
|..|||+++||.++.|||++++.+.+.|..+ +||+|||++++ |++|+++|+||++++|++ +|.+|
T Consensus 409 ~~~GEi~vrg~~v~~GY~~~p~~t~~~~~~d----------gw~~TGDlg~~~~~~d~~g~l~i~GR~~d~i~~~~G~~i 478 (614)
T PRK08180 409 GGKLEVRVKGPNVTPGYWRAPELTAEAFDEE----------GYYRSGDAVRFVDPADPERGLMFDGRIAEDFKLSSGTWV 478 (614)
T ss_pred CCCcEEEEecCccchhhcCChhHhHhhcccC----------CceeccceEEecCCcCCCCceEEecchhhhEEcCCCcEe
Confidence 4579999999999999999998887777543 69999999999 468999999999998885 78876
Q ss_pred c--hHHHHHHHhhCCCCC
Q psy4547 77 E--LQAIEVALRDYPVSR 92 (92)
Q Consensus 77 ~--~~~iE~~l~~~~~V~ 92 (92)
+ +.|||.++.+||.|+
T Consensus 479 ~~~p~Eie~~l~~~p~V~ 496 (614)
T PRK08180 479 SVGPLRARAVSAGAPLVQ 496 (614)
T ss_pred cchhhhHHHHhhcCchhh
Confidence 6 788999999999884
No 101
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=99.82 E-value=6.1e-20 Score=119.65 Aligned_cols=76 Identities=38% Similarity=0.609 Sum_probs=66.8
Q ss_pred ceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHHHHH
Q psy4547 4 PGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQAIEV 83 (92)
Q Consensus 4 ~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~iE~ 83 (92)
.|||+++|+.++.||++++... .|... +||+|||++++ ++|.++|.||.+|+||++|.+|+|.+||+
T Consensus 207 ~Gei~v~g~~~~~gY~~~~~~~--~~~~~----------g~~~TGDl~~~-~~g~l~i~GR~~d~i~~~G~~v~p~eIE~ 273 (358)
T PRK07824 207 DGRIALGGPTLAKGYRNPVDPD--PFAEP----------GWFRTDDLGAL-DDGVLTVLGRADDAISTGGLTVLPQVVEA 273 (358)
T ss_pred CCEEEEecCccccccCCCcccc--cccCC----------CceecccEEEE-eCCEEEEEeccCCeEEECCEEECHHHHHH
Confidence 4899999999999999977632 22222 59999999999 89999999999999999999999999999
Q ss_pred HHhhCCCCC
Q psy4547 84 ALRDYPVSR 92 (92)
Q Consensus 84 ~l~~~~~V~ 92 (92)
+|.+||.|+
T Consensus 274 ~l~~~~~V~ 282 (358)
T PRK07824 274 ALATHPAVA 282 (358)
T ss_pred HHHhCCCcc
Confidence 999999874
No 102
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=99.82 E-value=4.7e-20 Score=124.28 Aligned_cols=91 Identities=24% Similarity=0.344 Sum_probs=75.8
Q ss_pred CCceeEEEecCcccccccCCCcccccccccCCcc-cccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHH
Q psy4547 2 GTPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEH-LRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQA 80 (92)
Q Consensus 2 g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~-~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~ 80 (92)
|+.|||+++|+.++.|||++++.+...|...+.. ........||+|||+++++++|++++.||.+|+|+++|.+|+|.+
T Consensus 352 ~~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~e 431 (515)
T TIGR03098 352 GEEGELVHRGALVAMGYWNDPEKTAERFRPLPPRPGELHLPELAVWSGDTVRRDEEGFLYFVGRRDEMIKTSGYRVSPTE 431 (515)
T ss_pred CCceEEEEcCchhhccccCCchhhhhhhhccCCccccccccccceeccceEEEcCCceEEEEeccccceecCCEEeCHHH
Confidence 6789999999999999999988776666543210 011122359999999999999999999999999999999999999
Q ss_pred HHHHHhhCCCCC
Q psy4547 81 IEVALRDYPVSR 92 (92)
Q Consensus 81 iE~~l~~~~~V~ 92 (92)
||++|.+||.|+
T Consensus 432 iE~~l~~~~~v~ 443 (515)
T TIGR03098 432 VEEVAYATGLVA 443 (515)
T ss_pred HHHHHhcCCCee
Confidence 999999999874
No 103
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=99.82 E-value=4.1e-20 Score=123.57 Aligned_cols=76 Identities=26% Similarity=0.475 Sum_probs=67.3
Q ss_pred eeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHHHHHH
Q psy4547 5 GDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQAIEVA 84 (92)
Q Consensus 5 Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~iE~~ 84 (92)
|||+++|+.++.|||++++.+.... ..+||+|||+++++ +|.++|.||++|+||++|.+|+|.+||++
T Consensus 305 gel~v~g~~~~~gY~~~~~~~~~~~-----------~~~~~~TGD~~~~~-~g~l~~~gR~~d~i~~~G~~v~p~eiE~~ 372 (458)
T PRK09029 305 GEIWLRGASLALGYWRQGQLVPLVN-----------DEGWFATRDRGEWQ-NGELTILGRLDNLFFSGGEGIQPEEIERV 372 (458)
T ss_pred CEEEEecCceeeeeecCcccccccc-----------CCCccCCCCcEEEe-CCEEEEecccccceeeCCEEeCHHHHHHH
Confidence 8999999999999998876543211 12699999999999 99999999999999999999999999999
Q ss_pred HhhCCCCC
Q psy4547 85 LRDYPVSR 92 (92)
Q Consensus 85 l~~~~~V~ 92 (92)
|.+||.|.
T Consensus 373 l~~~~~v~ 380 (458)
T PRK09029 373 INQHPLVQ 380 (458)
T ss_pred HhcCCCcc
Confidence 99999874
No 104
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.82 E-value=4.4e-20 Score=125.98 Aligned_cols=81 Identities=23% Similarity=0.485 Sum_probs=73.6
Q ss_pred CCCceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHH
Q psy4547 1 MGTPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQA 80 (92)
Q Consensus 1 ~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~ 80 (92)
+|+.|||+++++.++.+|+++++.+...|. + +||+|||+++++++|.++++||.+++|+++|.+|+|.+
T Consensus 401 ~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~-~----------g~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~i~~~~ 469 (560)
T PRK08974 401 PGEPGELWVKGPQVMLGYWQRPEATDEVIK-D----------GWLATGDIAVMDEEGFLRIVDRKKDMILVSGFNVYPNE 469 (560)
T ss_pred CCCceEEEEecCCcchhhcCChhhhhhhhh-c----------CCcccCCEEEEcCCceEEEEecccceEEeCCEEECHHH
Confidence 367899999999999999999887766662 2 59999999999999999999999999999999999999
Q ss_pred HHHHHhhCCCCC
Q psy4547 81 IEVALRDYPVSR 92 (92)
Q Consensus 81 iE~~l~~~~~V~ 92 (92)
||++|.+||.|+
T Consensus 470 IE~~l~~~~~v~ 481 (560)
T PRK08974 470 IEDVVMLHPKVL 481 (560)
T ss_pred HHHHHHhCCCee
Confidence 999999999874
No 105
>PRK06188 acyl-CoA synthetase; Validated
Probab=99.81 E-value=4.6e-20 Score=124.92 Aligned_cols=81 Identities=27% Similarity=0.484 Sum_probs=73.4
Q ss_pred CCCceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHH
Q psy4547 1 MGTPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQA 80 (92)
Q Consensus 1 ~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~ 80 (92)
+|+.|||+++++.++.||++++..+...+.. +||+|||+++++++|.++|.||.+++|+++|.+|+|.+
T Consensus 362 ~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~-----------g~~~TGDl~~~~~~g~~~~~GR~~~~i~~~G~~i~~~~ 430 (524)
T PRK06188 362 QGEVGEICVRGPLVMDGYWNRPEETAEAFRD-----------GWLHTGDVAREDEDGFYYIVDRKKDMIVTGGFNVFPRE 430 (524)
T ss_pred CCCeeEEEEECcchhhhhcCChHHhhhhhcC-----------CceeecceEEEcCCccEEEEeccccceecCCEEECHHH
Confidence 3678999999999999999988876666532 59999999999999999999999999999999999999
Q ss_pred HHHHHhhCCCCC
Q psy4547 81 IEVALRDYPVSR 92 (92)
Q Consensus 81 iE~~l~~~~~V~ 92 (92)
||++|.+|+.|.
T Consensus 431 IE~~l~~~~~v~ 442 (524)
T PRK06188 431 VEDVLAEHPAVA 442 (524)
T ss_pred HHHHHHhCCCee
Confidence 999999999873
No 106
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=99.81 E-value=9.7e-20 Score=122.97 Aligned_cols=81 Identities=31% Similarity=0.478 Sum_probs=73.5
Q ss_pred CCCceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHH
Q psy4547 1 MGTPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQA 80 (92)
Q Consensus 1 ~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~ 80 (92)
+|++|||+++++.++.+|+++++.+...|.. +||+|||+++++++|.++|.||.+|+|+++|.+|+|.+
T Consensus 353 ~g~~Gel~i~~~~~~~gY~~~~~~~~~~~~~-----------~~~~TGD~~~~~~~g~~~~~gR~~d~i~~~G~~v~~~~ 421 (508)
T TIGR02262 353 AGEPGELLISGPSSATMYWNNRAKTRDTFQG-----------EWTRSGDKYVRNDDGSYTYAGRTDDMLKVSGIYVSPFE 421 (508)
T ss_pred CCCeeEEEEecCccccccCCCHHHhHhhhhc-----------CceeccceEEEcCCccEEEeccccceeeeCCEEECHHH
Confidence 3678999999999999999998877666532 59999999999999999999999999999999999999
Q ss_pred HHHHHhhCCCCC
Q psy4547 81 IEVALRDYPVSR 92 (92)
Q Consensus 81 iE~~l~~~~~V~ 92 (92)
||++|.+|++|.
T Consensus 422 ie~~l~~~~~v~ 433 (508)
T TIGR02262 422 IESALIQHPAVL 433 (508)
T ss_pred HHHHHHhCCCee
Confidence 999999999873
No 107
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.81 E-value=1.1e-19 Score=123.84 Aligned_cols=76 Identities=24% Similarity=0.299 Sum_probs=68.0
Q ss_pred CceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHHHH
Q psy4547 3 TPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQAIE 82 (92)
Q Consensus 3 ~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~iE 82 (92)
++|||+++|+.++.|||+++. ..+. .+||+|||+++++++|.+++.||++|+||++|.+|+|.+||
T Consensus 383 ~~Gei~v~g~~~~~gy~~~~~---~~~~-----------~g~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~p~eIE 448 (539)
T PRK07008 383 AFGDLQVRGPWVIDRYFRGDA---SPLV-----------DGWFPTGDVATIDADGFMQITDRSKDVIKSGGEWISSIDIE 448 (539)
T ss_pred cceEEEEeCCccchhhcCChh---hhhc-----------CCCcccCceEEEcCCCcEEEeecccCEEEeCCeEEcHHHHH
Confidence 469999999999999999873 2222 15999999999999999999999999999999999999999
Q ss_pred HHHhhCCCCC
Q psy4547 83 VALRDYPVSR 92 (92)
Q Consensus 83 ~~l~~~~~V~ 92 (92)
++|.+||.|+
T Consensus 449 ~~l~~~p~v~ 458 (539)
T PRK07008 449 NVAVAHPAVA 458 (539)
T ss_pred HHHHhCCcee
Confidence 9999999874
No 108
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=99.80 E-value=1.4e-19 Score=119.89 Aligned_cols=79 Identities=32% Similarity=0.452 Sum_probs=69.7
Q ss_pred CceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHHHH
Q psy4547 3 TPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQAIE 82 (92)
Q Consensus 3 ~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~iE 82 (92)
+.|||+++++.++.+||+++..+...+. . +||+|||+++++++|.+++.||.+|+||++|.+|++.+||
T Consensus 291 ~~Gel~v~~~~~~~gy~~~~~~~~~~~~-~----------~~~~TGD~~~~~~dg~~~~~GR~~d~i~~~G~~v~~~~iE 359 (436)
T TIGR01923 291 GHGEIMVKGANLMKGYLYQGELTPAFEQ-Q----------GWFNTGDIGELDGEGFLYVLGRRDDLIISGGENIYPEEIE 359 (436)
T ss_pred CceEEEEECCccchhhCCChhhhhhhhc-C----------CCeeccceEEEcCCCCEEEeccccCeEEeCCEeeCHHHHH
Confidence 5699999999999999997665443321 1 5999999999999999999999999999999999999999
Q ss_pred HHHhhCCCCC
Q psy4547 83 VALRDYPVSR 92 (92)
Q Consensus 83 ~~l~~~~~V~ 92 (92)
++|.++|.|+
T Consensus 360 ~~l~~~~~v~ 369 (436)
T TIGR01923 360 TVLYQHPGIQ 369 (436)
T ss_pred HHHHhCCCee
Confidence 9999999874
No 109
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=99.80 E-value=2.2e-19 Score=121.27 Aligned_cols=81 Identities=27% Similarity=0.299 Sum_probs=71.0
Q ss_pred CCCceeEEEecCcccc-cccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechH
Q psy4547 1 MGTPGDIYIGGPTLAI-GYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQ 79 (92)
Q Consensus 1 ~g~~Gel~v~~~~~~~-gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~ 79 (92)
+|++|||+++++.++. +|++++..+...+. + +||+|||+++++++|.+++.||.+|+||++|.+|+|.
T Consensus 347 ~g~~Gel~v~~~~~~~~~y~~~~~~~~~~~~-~----------~~~~TGD~~~~~~~g~~~~~GR~~d~ik~~G~~v~~~ 415 (509)
T PRK12406 347 QGEIGEIYSRIAGNPDFTYHNKPEKRAEIDR-G----------GFITSGDVGYLDADGYLFLCDRKRDMVISGGVNIYPA 415 (509)
T ss_pred CCCceEEEEECCccccccccCCchhcccccC-C----------CCeEEccEEEEcCCceEEEeecccceEEECCEEECHH
Confidence 3678999999998765 89988876654432 2 5999999999999999999999999999999999999
Q ss_pred HHHHHHhhCCCCC
Q psy4547 80 AIEVALRDYPVSR 92 (92)
Q Consensus 80 ~iE~~l~~~~~V~ 92 (92)
+||+.|.+||.|+
T Consensus 416 ~IE~~l~~~~~v~ 428 (509)
T PRK12406 416 EIEAVLHAVPGVH 428 (509)
T ss_pred HHHHHHHhCCCee
Confidence 9999999999874
No 110
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.80 E-value=1.7e-19 Score=130.31 Aligned_cols=78 Identities=12% Similarity=0.107 Sum_probs=62.7
Q ss_pred CCCceeEEEecCcccccccCCCccc--ccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEech
Q psy4547 1 MGTPGDIYIGGPTLAIGYLNRPDLN--KMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIEL 78 (92)
Q Consensus 1 ~g~~Gel~v~~~~~~~gy~~~~~~~--~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~ 78 (92)
+|++|||+++++.. ++ ++.+ ...|.. +.+||+|||++++|+||+|+|+||+|++||++|.+|+|
T Consensus 806 ~ge~Gel~~~~~~~----~~-p~~t~~~~~~~~---------~dgw~~TGDlg~~d~dG~l~~~GR~dd~Ik~~G~~I~p 871 (994)
T PRK07868 806 VNEVGVLLARARGP----ID-PTASVKRGVFAP---------ADTWISTEYLFRRDDDGDYWLVDRRGSVIRTARGPVYT 871 (994)
T ss_pred CCCceEEEEecCCC----CC-hhhhhHhccccc---------CCEEEeccceEEEcCCCCEEEeccCCCEEEeCCceEcH
Confidence 47889999988753 32 3222 111211 23799999999999999999999999999999999999
Q ss_pred HHHHHHHhhCCCCC
Q psy4547 79 QAIEVALRDYPVSR 92 (92)
Q Consensus 79 ~~iE~~l~~~~~V~ 92 (92)
.|||++|.+||.|+
T Consensus 872 ~EIE~~L~~hp~V~ 885 (994)
T PRK07868 872 EPVTDALGRIGGVD 885 (994)
T ss_pred HHHHHHHhcCCCee
Confidence 99999999999984
No 111
>PRK13383 acyl-CoA synthetase; Provisional
Probab=99.80 E-value=2.8e-19 Score=121.13 Aligned_cols=78 Identities=27% Similarity=0.429 Sum_probs=68.5
Q ss_pred CCCceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHH
Q psy4547 1 MGTPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQA 80 (92)
Q Consensus 1 ~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~ 80 (92)
+|+.|||+++++.++.+|++.+. ..+ .+ +||+|||+++++++|++++.||.+++||++|.+|+|.+
T Consensus 368 ~g~~Gel~v~g~~~~~~Y~~~~~---~~~-~~----------g~~~TGDl~~~d~~G~l~i~GR~~~~i~~~G~~v~~~e 433 (516)
T PRK13383 368 PRVTGRIFVGGELAGTRYTDGGG---KAV-VD----------GMTSTGDMGYLDNAGRLFIVGREDDMIISGGENVYPRA 433 (516)
T ss_pred CCCceEEEEecCcccccccCCch---hhe-ec----------CceecceeEEEcCCccEEEeccccceEEECCEEECHHH
Confidence 36789999999999999987643 111 11 69999999999999999999999999999999999999
Q ss_pred HHHHHhhCCCCC
Q psy4547 81 IEVALRDYPVSR 92 (92)
Q Consensus 81 iE~~l~~~~~V~ 92 (92)
||+.|.+||.|.
T Consensus 434 iE~~l~~~~~v~ 445 (516)
T PRK13383 434 VENALAAHPAVA 445 (516)
T ss_pred HHHHHHhCCCee
Confidence 999999999873
No 112
>KOG1180|consensus
Probab=99.80 E-value=4.7e-20 Score=124.68 Aligned_cols=81 Identities=37% Similarity=0.643 Sum_probs=75.5
Q ss_pred ceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEE-ccEEechHHHH
Q psy4547 4 PGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKI-RGYTIELQAIE 82 (92)
Q Consensus 4 ~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~-~G~~v~~~~iE 82 (92)
.|||+++|+.++.||+++++.+++.|... .+.+||+|||+|.+.+||.|.|.+|++|.||+ +|+.|+++.||
T Consensus 483 rGEI~i~G~~vt~gY~kn~ekT~e~ft~~-------~G~~WF~TGDIGe~~pdG~LkIIDRKKdLVKlq~GEYIsL~KvE 555 (678)
T KOG1180|consen 483 RGEILIGGPNVTMGYYKNEEKTKEDFTVE-------DGQRWFRTGDIGEFHPDGCLKIIDRKKDLVKLQNGEYISLGKVE 555 (678)
T ss_pred CceEEecCCccChhhhCChhhhhhhceec-------CCcEEEeccccceecCCCcEEEeechhhhhhhcccceeehHHHH
Confidence 69999999999999999999999999872 13369999999999999999999999999999 99999999999
Q ss_pred HHHhhCCCC
Q psy4547 83 VALRDYPVS 91 (92)
Q Consensus 83 ~~l~~~~~V 91 (92)
.+++..|.|
T Consensus 556 a~l~s~p~V 564 (678)
T KOG1180|consen 556 AALRSSPYV 564 (678)
T ss_pred HHHhcCcch
Confidence 999999987
No 113
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.78 E-value=6.1e-19 Score=118.71 Aligned_cols=80 Identities=31% Similarity=0.456 Sum_probs=73.2
Q ss_pred CCceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHHH
Q psy4547 2 GTPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQAI 81 (92)
Q Consensus 2 g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~i 81 (92)
|+.|||+++++.++.+|+++++.+...|.. +||+|||+++++++|.+++.||.++++|++|.+++|.+|
T Consensus 365 g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~-----------~~~~tGD~~~~~~~g~~~~~GR~~~~i~~~G~~v~~~~I 433 (521)
T PRK06187 365 GEVGEIIVRGPWLMQGYWNRPEATAETIDG-----------GWLHTGDVGYIDEDGYLYITDRIKDVIISGGENIYPREL 433 (521)
T ss_pred CCeeEEEEECcchhhhhcCCHHHHHHHhhC-----------CceeccceEEEcCCCCEEEeecccceEEcCCeEECHHHH
Confidence 788999999999999999988777666643 499999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCC
Q psy4547 82 EVALRDYPVSR 92 (92)
Q Consensus 82 E~~l~~~~~V~ 92 (92)
|++|.+++.|+
T Consensus 434 E~~l~~~~~v~ 444 (521)
T PRK06187 434 EDALYGHPAVA 444 (521)
T ss_pred HHHHHhCCCce
Confidence 99999999874
No 114
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=99.77 E-value=2.2e-18 Score=117.39 Aligned_cols=77 Identities=22% Similarity=0.250 Sum_probs=66.9
Q ss_pred CceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHHHH
Q psy4547 3 TPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQAIE 82 (92)
Q Consensus 3 ~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~iE 82 (92)
+.|||+++++.++.+||+.. ...+.. .+||+|||+++++++|++++.||.+++|+++|.+|++.+||
T Consensus 383 ~~Gel~i~g~~~~~gy~~~~---~~~~~~----------~~~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~~~eIE 449 (542)
T PRK06018 383 TFGRLKVRGPAVAAAYYRVD---GEILDD----------DGFFDTGDVATIDAYGYMRITDRSKDVIKSGGEWISSIDLE 449 (542)
T ss_pred ceeEEEEecCCcchhhhcCc---ccEecC----------CcEEEcCCEEEEcCCccEEEEecCCCeEEECCEEECHHHHH
Confidence 46999999999999999832 111111 16999999999999999999999999999999999999999
Q ss_pred HHHhhCCCCC
Q psy4547 83 VALRDYPVSR 92 (92)
Q Consensus 83 ~~l~~~~~V~ 92 (92)
+++.+||.|+
T Consensus 450 ~~l~~~~~v~ 459 (542)
T PRK06018 450 NLAVGHPKVA 459 (542)
T ss_pred HHHHhCCcce
Confidence 9999999874
No 115
>PRK07798 acyl-CoA synthetase; Validated
Probab=99.74 E-value=1e-17 Score=113.14 Aligned_cols=80 Identities=26% Similarity=0.388 Sum_probs=69.1
Q ss_pred eeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHHHHHH
Q psy4547 5 GDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQAIEVA 84 (92)
Q Consensus 5 Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~iE~~ 84 (92)
|+|+. ++.++.+||+++..+.+.|... .+.+||+|||+++++++|.+++.||.+++||++|.+|+|.+||++
T Consensus 378 g~l~~-~~~~~~gy~~~~~~t~~~f~~~-------~~~~~~~TGD~~~~~~~g~l~~~GR~~~~i~~~G~~v~~~eIE~~ 449 (533)
T PRK07798 378 GWIAR-RGHIPLGYYKDPEKTAETFPTI-------DGVRYAIPGDRARVEADGTITLLGRGSVCINTGGEKVFPEEVEEA 449 (533)
T ss_pred eEEEe-ecCccccccCChhhhHHhhccC-------CCCceEEcCcEEEEcCCCcEEEEccccceEecCCEEeCHHHHHHH
Confidence 66654 6678999999998887777542 123699999999999999999999999999999999999999999
Q ss_pred HhhCCCCC
Q psy4547 85 LRDYPVSR 92 (92)
Q Consensus 85 l~~~~~V~ 92 (92)
|.++|.|.
T Consensus 450 l~~~~~v~ 457 (533)
T PRK07798 450 LKAHPDVA 457 (533)
T ss_pred HHhCccce
Confidence 99999873
No 116
>PLN03052 acetate--CoA ligase; Provisional
Probab=99.72 E-value=3.3e-17 Score=115.57 Aligned_cols=84 Identities=20% Similarity=0.203 Sum_probs=63.6
Q ss_pred ceeEEEecC--cccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHHH
Q psy4547 4 PGDIYIGGP--TLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQAI 81 (92)
Q Consensus 4 ~Gel~v~~~--~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~i 81 (92)
+|||+++++ ....+|+++.. ...-|...+. ..+.+||+|||++++|++|+++|+||+||+||++|++|+|.||
T Consensus 553 ~GEL~v~~~~~~~~~~~~~~~~-~~~yf~~~p~----~~g~~~~~tGDl~~~d~dG~l~i~GR~Dd~I~~~G~rI~~~EI 627 (728)
T PLN03052 553 TGELALFPLMFGASSTLLNADH-YKVYFKGMPV----FNGKILRRHGDIFERTSGGYYRAHGRADDTMNLGGIKVSSVEI 627 (728)
T ss_pred eEEEEEeCCCCCCCccccCchh-hhhhhhcCCC----CCCCEEEecCceEEECCCCeEEEEecCCCEEeeCCEEeCHHHH
Confidence 599999764 33456777532 2222222111 1123599999999999999999999999999999999999999
Q ss_pred HHHHh-hCCCCC
Q psy4547 82 EVALR-DYPVSR 92 (92)
Q Consensus 82 E~~l~-~~~~V~ 92 (92)
|++|. .||.|.
T Consensus 628 E~~l~~~~p~V~ 639 (728)
T PLN03052 628 ERVCNAADESVL 639 (728)
T ss_pred HHHHHhcCCCcc
Confidence 99995 789873
No 117
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=99.71 E-value=6.8e-18 Score=111.35 Aligned_cols=62 Identities=45% Similarity=0.806 Sum_probs=56.3
Q ss_pred CCCceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEc
Q psy4547 1 MGTPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIR 72 (92)
Q Consensus 1 ~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~ 72 (92)
+|+.|||+++||.++.||+++++.+.+.|.+. +||+|||++++|++|+++++||.||+||++
T Consensus 356 ~g~~Gei~i~~~~~~~gy~~~~~~~~~~~~~~----------~~~~TGD~g~~d~~G~~~~~GR~~~~i~~~ 417 (417)
T PF00501_consen 356 PGEPGEIVIRGPNVFSGYYNDPELTAEAFIDD----------GWYRTGDLGRLDEDGYLYILGRSDDMIKVR 417 (417)
T ss_dssp TTSEEEEEEESTTSBSEETTBHHHHHHHEETT----------SEEEEEEEEEEETTSEEEEEEEGSCEEEET
T ss_pred ccccccccccCCccceeeeccccccccccccc----------cceecceEEEECCCCeEEEEEeeCCEEEeC
Confidence 47889999999999999999888888887653 599999999999999999999999999974
No 118
>PRK08308 acyl-CoA synthetase; Validated
Probab=99.65 E-value=7.4e-16 Score=102.21 Aligned_cols=50 Identities=24% Similarity=0.413 Sum_probs=48.2
Q ss_pred eEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHHHHHHHhhCCCCC
Q psy4547 43 RLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQAIEVALRDYPVSR 92 (92)
Q Consensus 43 ~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~iE~~l~~~~~V~ 92 (92)
+||+|||+++++++|+++|+||.+++||++|.+|+|.+||++|.++|.|+
T Consensus 291 ~~~~TGDl~~~~~dg~l~~~GR~~~~ik~~G~~v~p~eIE~~l~~~~~v~ 340 (414)
T PRK08308 291 KEIFTKDLGYKSERGTLHFMGRMDDVINVSGLNVYPIEVEDVMLRLPGVQ 340 (414)
T ss_pred ceEECCceEEECCCccEEEecccCCeEEECCEEECHHHHHHHHHhCCCee
Confidence 69999999999999999999999999999999999999999999999874
No 119
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.61 E-value=1.1e-15 Score=105.89 Aligned_cols=79 Identities=57% Similarity=1.009 Sum_probs=74.2
Q ss_pred CCCceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHH
Q psy4547 1 MGTPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQA 80 (92)
Q Consensus 1 ~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~ 80 (92)
.|..|||++.|.++.+||++.++.+...|... ++|+|||++++.++|.+.++||.|.++|++|.+|.+.|
T Consensus 564 ~gv~gel~i~g~~~a~gy~~~p~lt~~~f~~~----------~~y~tgD~~r~~~dg~~e~lgr~D~qvki~g~Riel~e 633 (642)
T COG1020 564 LGVPGELYIAGLGLALGYLNRPDLTAERFIAL----------RLYRTGDLARPLADGALEYLGRKDSQVKIRGFRIELGE 633 (642)
T ss_pred CCCCeeeEECCcchhhhhcCChhhhHHHhhhc----------cCccCCCeeeECCCCeEEEeccccceeEeceEecCcHH
Confidence 36789999999999999999999999999775 28999999999999999999999999999999999999
Q ss_pred HHHHHhhCC
Q psy4547 81 IEVALRDYP 89 (92)
Q Consensus 81 iE~~l~~~~ 89 (92)
||..+.++|
T Consensus 634 ie~~l~~~~ 642 (642)
T COG1020 634 IEAALAEQP 642 (642)
T ss_pred HHHHHhcCC
Confidence 999999876
No 120
>KOG1179|consensus
Probab=99.59 E-value=3.7e-15 Score=101.37 Aligned_cols=87 Identities=20% Similarity=0.232 Sum_probs=72.7
Q ss_pred CCCceeEEEe--c--C-cccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEE
Q psy4547 1 MGTPGDIYIG--G--P-TLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYT 75 (92)
Q Consensus 1 ~g~~Gel~v~--~--~-~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~ 75 (92)
|||+|.|+-+ . | ..+.||.++...+.++...+.+ ..++.||.|||+..+|+.|+++|.+|..|++.+.|+|
T Consensus 445 ~GEpGlLv~~i~~k~P~~~F~GY~g~~~~t~kKl~rDVF----kkGD~~f~tGDlLv~D~~GylYF~DRtGDTFRWKGEN 520 (649)
T KOG1179|consen 445 PGEPGLLVGKIVQKNPLRSFLGYAGPKKATEKKLLRDVF----KKGDVYFNTGDLLVADELGYLYFKDRTGDTFRWKGEN 520 (649)
T ss_pred CCCCceEEEEeccCCchhhhccccCchhhhhhhhHHhhh----ccCcEEEeeCcEEEEecCCcEEEeccCCCceeecCCc
Confidence 6899977532 2 3 2388999988778777776665 4456799999999999999999999999999999999
Q ss_pred echHHHHHHHhhCCCC
Q psy4547 76 IELQAIEVALRDYPVS 91 (92)
Q Consensus 76 v~~~~iE~~l~~~~~V 91 (92)
|++.|||++|.....+
T Consensus 521 VsTtEVe~~l~~~~~~ 536 (649)
T KOG1179|consen 521 VSTTEVEDVLSALDFL 536 (649)
T ss_pred ccHHHHHHHHhhhccc
Confidence 9999999999877654
No 121
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=99.54 E-value=3.3e-14 Score=94.85 Aligned_cols=50 Identities=26% Similarity=0.268 Sum_probs=45.6
Q ss_pred eEEEcCCeEEEecC-C-----cEEEecccCCeEEEccEEechHHHHHHHhhCCCCC
Q psy4547 43 RLYNTGDWGYALGD-G-----TFEVIGRSDTMVKIRGYTIELQAIEVALRDYPVSR 92 (92)
Q Consensus 43 ~~~~tGD~~~~~~~-g-----~l~~~gR~~~~i~~~G~~v~~~~iE~~l~~~~~V~ 92 (92)
.||+|||+++++++ | .+++.||.+|+|+++|.+|+|.+||.+|.+||.|.
T Consensus 289 ~ry~TGDl~~~~~~~Gr~~~~~~~i~GR~~d~i~~~G~~v~p~eie~~l~~~~~v~ 344 (422)
T TIGR02155 289 IRYRTRDLTRLLPGTARTMRRMDRITGRSDDMLIIRGVNVFPTQLEEVILKMDELS 344 (422)
T ss_pred eeEEcCcEEEEECCCCCcccccccccCccCCeEEECCEEECHHHHHHHHHhCcCcC
Confidence 59999999999875 4 46899999999999999999999999999999884
No 122
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=99.45 E-value=2e-13 Score=90.73 Aligned_cols=50 Identities=24% Similarity=0.362 Sum_probs=47.9
Q ss_pred eEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHHHHHHHhhCCCCC
Q psy4547 43 RLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQAIEVALRDYPVSR 92 (92)
Q Consensus 43 ~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~iE~~l~~~~~V~ 92 (92)
.|++|||+++++++|+|+|.||.|++||++|.+|+|.+||++|.+||.|+
T Consensus 275 ~~~~tgD~g~~d~~G~l~i~GR~dd~Ik~~G~~V~p~eIE~~l~~~p~V~ 324 (386)
T TIGR02372 275 RRLDLQDRLAWDKDGGFTILGRKDEILQVGGVNVSPGHVRDILERNPRVR 324 (386)
T ss_pred ceeecCceEEEcCCCcEEEecccCCEEEECCEEEcHHHHHHHHHcCCCce
Confidence 47999999999999999999999999999999999999999999999874
No 123
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.39 E-value=7.6e-13 Score=87.44 Aligned_cols=45 Identities=22% Similarity=0.237 Sum_probs=41.7
Q ss_pred eeEEEcCCeEEE-ecCCcEEEecccCCeEEEcc---EEechHHHHHHHhhCCCCC
Q psy4547 42 VRLYNTGDWGYA-LGDGTFEVIGRSDTMVKIRG---YTIELQAIEVALRDYPVSR 92 (92)
Q Consensus 42 ~~~~~tGD~~~~-~~~g~l~~~gR~~~~i~~~G---~~v~~~~iE~~l~~~~~V~ 92 (92)
.+||+|||++++ |++|+|+|.||.+ +| .+|+|. ||++|.+||+|.
T Consensus 208 dgW~~TGDlg~~~d~dG~l~~~gR~~-----~G~~i~nV~p~-IE~~L~~hp~V~ 256 (365)
T PRK09188 208 RIWLATGKKVYNFITRGLFSWSDGEG-----TGDRIDNEAPA-IQAALKSDPAVS 256 (365)
T ss_pred CcEEeCCCEEEEEcCCCeEEEEecCc-----CCcCceeeCHH-HHHHHHhCCCcc
Confidence 479999999998 7999999999997 78 799999 999999999984
No 124
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=98.93 E-value=4.9e-09 Score=70.92 Aligned_cols=45 Identities=20% Similarity=0.168 Sum_probs=37.1
Q ss_pred EEEcCCeEEEec-----CCc----EEEecccCCeEEEccEEechHHHHHHHhhC
Q psy4547 44 LYNTGDWGYALG-----DGT----FEVIGRSDTMVKIRGYTIELQAIEVALRDY 88 (92)
Q Consensus 44 ~~~tGD~~~~~~-----~g~----l~~~gR~~~~i~~~G~~v~~~~iE~~l~~~ 88 (92)
=|+|||++.+.. .|. +...||.||+++++|.+|+|.+||++|.++
T Consensus 299 RYrtgD~~~~~~~~~C~CGr~~~r~~~~gR~dd~~~~~g~~~~p~~ie~~l~~~ 352 (445)
T TIGR03335 299 NYDTEDTTVVISRDRCPCGRTHMRILNPEREAETIWISGVPFNRVDVERAVFQR 352 (445)
T ss_pred EeecCceEEEecCCCCCCCCCcceeCCCcccCceEEECCEEeCHHHHHHHHhcc
Confidence 489999998632 232 445699999999999999999999999984
No 125
>KOG1178|consensus
Probab=98.79 E-value=7.9e-09 Score=75.38 Aligned_cols=52 Identities=37% Similarity=0.606 Sum_probs=48.9
Q ss_pred ceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHHHHHHHhhCCCCC
Q psy4547 41 GVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQAIEVALRDYPVSR 92 (92)
Q Consensus 41 ~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~iE~~l~~~~~V~ 92 (92)
..++|+|||.++.-.+|.+.+.||.|++||.+|.++...+|+..+..||.|+
T Consensus 452 ~~r~y~tgD~gr~l~ng~l~~~GR~d~qIK~rG~Ri~L~ei~t~v~~~p~v~ 503 (1032)
T KOG1178|consen 452 KARIYRTGDNGRSLKNGGLEISGRADRQIKDRGVRIELGELNTVVEVHPDVK 503 (1032)
T ss_pred hhhcccccccceeecCCCEEEEEeccceEEEccEEEehhhhchhhccCcchh
Confidence 3479999999999999999999999999999999999999999999999874
No 126
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=98.58 E-value=2.8e-07 Score=62.30 Aligned_cols=49 Identities=37% Similarity=0.493 Sum_probs=42.6
Q ss_pred EEEcCCeEEEecC----Cc-----EEEecccCCeEEEccEEechHHHHHHHhhCCCCC
Q psy4547 44 LYNTGDWGYALGD----GT-----FEVIGRSDTMVKIRGYTIELQAIEVALRDYPVSR 92 (92)
Q Consensus 44 ~~~tGD~~~~~~~----g~-----l~~~gR~~~~i~~~G~~v~~~~iE~~l~~~~~V~ 92 (92)
=|+|||+....++ |+ ..+.||.||++++.|.+|+|..||.+|.+.+.+.
T Consensus 303 RYrtgDit~i~~~~C~cGr~~~ri~~I~GR~dD~l~~~G~~vfp~~ie~~l~~~~~~~ 360 (438)
T COG1541 303 RYRTGDITVILSDPCGCGRTHRRIERIEGRSDDMLIVRGVNVFPSQIERVLLQIPEVT 360 (438)
T ss_pred EEEcCCeeEecccCCCCCCccccccccCcccccEEEECCEEeCHHHHHHHHhcccCCC
Confidence 4999999999763 32 4688999999999999999999999999998763
No 127
>PTZ00297 pantothenate kinase; Provisional
Probab=98.52 E-value=1.3e-07 Score=71.45 Aligned_cols=61 Identities=10% Similarity=0.038 Sum_probs=49.1
Q ss_pred ceeEEEecCcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEecCCcEEEecccCCeEEE-ccEEechHHHH
Q psy4547 4 PGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKI-RGYTIELQAIE 82 (92)
Q Consensus 4 ~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~-~G~~v~~~~iE 82 (92)
.|||+++ |+++++.|.+.+ . +|+ +||.|.|+||++++||. +|++|+|+.||
T Consensus 825 ~GEIlvr-------~~kdpe~T~e~~--~----------gW~---------~dG~L~IidRkKdlikls~GEyVaP~~IE 876 (1452)
T PTZ00297 825 IGQLVLA-------KKGEPRRTLPIA--A----------QWK---------RDRTLRLLGPPLGILLPVAYEYVIAAELE 876 (1452)
T ss_pred CCeEEEE-------ECCChHHHHHhh--C----------cCc---------cCCeEEEEeccccceECCCCcEEcHHHHH
Confidence 4888885 457777665421 1 354 68999999999999999 99999999999
Q ss_pred HHHhhCCCCC
Q psy4547 83 VALRDYPVSR 92 (92)
Q Consensus 83 ~~l~~~~~V~ 92 (92)
+.+.++|.|.
T Consensus 877 ~~l~~sp~I~ 886 (1452)
T PTZ00297 877 RIFSQSRYVN 886 (1452)
T ss_pred HHHhcCCCcc
Confidence 9999999873
No 128
>KOG3628|consensus
Probab=98.51 E-value=3.2e-07 Score=67.28 Aligned_cols=86 Identities=22% Similarity=0.264 Sum_probs=63.5
Q ss_pred CCceeEEEecCcccccccCCCcccccccccCCcccc---c-ccceeEEEcCCeEEEe------cCC----cEEEecccCC
Q psy4547 2 GTPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEHLR---K-TCGVRLYNTGDWGYAL------GDG----TFEVIGRSDT 67 (92)
Q Consensus 2 g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~tGD~~~~~------~~g----~l~~~gR~~~ 67 (92)
|+.||||+.+..-+.+|+...+. +..+.++.. + ..+..|-||||+|+.. +.+ -||++|-.++
T Consensus 1178 ge~GEIW~~S~hnA~~~~~~~d~----~~~~~fn~rl~~g~~~~~sy~RTG~LGFl~~t~~t~~~~e~~~~LyVlG~i~E 1253 (1363)
T KOG3628|consen 1178 GELGEIWVNSAHNASCSFTIGDE----LRSNHFNARLSSGDLLGKSYARTGDLGFLRRTSLTDANVERHDLLYVLGAIDE 1253 (1363)
T ss_pred CCcceEEeccccccccccccCch----hhhhhhhhhccccccccccceeeeeeeeeeeeecccccceeeeeEEEeecccc
Confidence 78899999998888777654221 222222211 1 1245799999999983 222 4899999999
Q ss_pred eEEEccEEechHHHHHHHh-hCCCC
Q psy4547 68 MVKIRGYTIELQAIEVALR-DYPVS 91 (92)
Q Consensus 68 ~i~~~G~~v~~~~iE~~l~-~~~~V 91 (92)
.+.++|.+.+|.+||..+. .||.|
T Consensus 1254 tlEl~GL~h~p~DIE~TV~~vH~~I 1278 (1363)
T KOG3628|consen 1254 TLELNGLRHFPSDIETTVERVHPSI 1278 (1363)
T ss_pred eeeecCcccCcchHHHHHHHhcccc
Confidence 9999999999999999998 57776
No 129
>KOG3628|consensus
Probab=97.67 E-value=1.7e-05 Score=58.62 Aligned_cols=83 Identities=16% Similarity=0.285 Sum_probs=58.5
Q ss_pred CCCceeEEEecCcccccccCCCcccccccccCCcc--cccccceeEEEcCCeEEEecCCcEEEecccCCeEEEccEEech
Q psy4547 1 MGTPGDIYIGGPTLAIGYLNRPDLNKMRFISTPEH--LRKTCGVRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIEL 78 (92)
Q Consensus 1 ~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~--~~~~~~~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~ 78 (92)
++++|||||.++++...||.-+..+...|...+-. ........|.+||=+|++..++-+++.++.|....+.|..+..
T Consensus 527 ~~eVGEIwVsS~~~~~~~~al~~~t~~~F~~~~~~s~~~~~~n~~FmRtGLlGFv~~gki~vl~~k~d~llq~~~~~h~~ 606 (1363)
T KOG3628|consen 527 TDEVGEIWVSSNSLGKLFYALDKQTENTFKATPVESSGKPPSNVPFMRTGLLGFVHNGKIYVLGLKEDGLLQVSGWRHNA 606 (1363)
T ss_pred cCcceeEEEecCCcccceeeccccccceEEeeeccccCCCCccchhhhhcceeeeeCCeEEEEEechhhhhhhhhhhhhh
Confidence 47899999999999999998877776666432211 1112233589999999998766655556777776777777766
Q ss_pred HHHHH
Q psy4547 79 QAIEV 83 (92)
Q Consensus 79 ~~iE~ 83 (92)
.+|-.
T Consensus 607 d~iv~ 611 (1363)
T KOG3628|consen 607 DDIVA 611 (1363)
T ss_pred hhhHh
Confidence 55543
No 130
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=96.30 E-value=0.011 Score=40.60 Aligned_cols=48 Identities=21% Similarity=0.326 Sum_probs=34.5
Q ss_pred EEEcCCeEEEecC----Cc----E-EEecccCCeEEE---cc--EEechHHHHHHHh-hCCCC
Q psy4547 44 LYNTGDWGYALGD----GT----F-EVIGRSDTMVKI---RG--YTIELQAIEVALR-DYPVS 91 (92)
Q Consensus 44 ~~~tGD~~~~~~~----g~----l-~~~gR~~~~i~~---~G--~~v~~~~iE~~l~-~~~~V 91 (92)
=|+|||++..... |. + .+.||.+|++++ +| .+|+|..++.+|. ..+.|
T Consensus 296 RYrtGD~~~~~~~~C~CGr~~~~i~~I~GR~dD~l~~~~~~G~~v~v~p~~~~~~i~~~~~~i 358 (430)
T TIGR02304 296 RYRLNDILVESEQPCSCGSATMAIERIEGRQDDIFQLITRSGDEQTVFPDFIRRVILFTLPLI 358 (430)
T ss_pred eeeCCCEEEeCCCCCCCCCcccccCCccCccCCEEEEecCCCCeEEeCHHHHHHHHHhcCCCC
Confidence 4899999887443 32 3 378999999986 34 5569999988755 45554
No 131
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin. The auxin-responsive GH3 gene promoter is composed of multiple auxin response elements (AuxREs), and each AuxRE contributes incrementally to the strong auxin inducibility to the promoter.; PDB: 4EPL_A 4EQ4_B 4EWV_B 4EQL_B 4EPM_A.
Probab=95.95 E-value=0.013 Score=41.05 Aligned_cols=44 Identities=20% Similarity=0.375 Sum_probs=35.8
Q ss_pred EEcCCeEEEec--CC--cEEEecccCCeEEEccEEechHHHHHHHhhC
Q psy4547 45 YNTGDWGYALG--DG--TFEVIGRSDTMVKIRGYTIELQAIEVALRDY 88 (92)
Q Consensus 45 ~~tGD~~~~~~--~g--~l~~~gR~~~~i~~~G~~v~~~~iE~~l~~~ 88 (92)
|+.||+++... +. .+.|+||.+.++++.|++++-.+|.++|.+.
T Consensus 371 Y~iGDvVrv~gf~~~~P~i~F~~R~~~~l~l~gEkl~e~~v~~av~~~ 418 (528)
T PF03321_consen 371 YRIGDVVRVTGFYNQTPRIEFVGRRGQVLSLFGEKLSEEQVQEAVARA 418 (528)
T ss_dssp EEECEEEEEEEEETTEEEEEEEEETTEEE-SSS--EEHHHHHHHHHHH
T ss_pred eecCCEEEEeeccCCCcEEEEeccCCceeecceeecCHHHHHHHHHHH
Confidence 88999998843 34 6999999999999999999999999998753
No 132
>PLN02249 indole-3-acetic acid-amido synthetase
Probab=95.04 E-value=0.053 Score=38.77 Aligned_cols=43 Identities=21% Similarity=0.344 Sum_probs=38.1
Q ss_pred EEcCCeEEEecC----CcEEEecccCCeEEEccEEechHHHHHHHhh
Q psy4547 45 YNTGDWGYALGD----GTFEVIGRSDTMVKIRGYTIELQAIEVALRD 87 (92)
Q Consensus 45 ~~tGD~~~~~~~----g~l~~~gR~~~~i~~~G~~v~~~~iE~~l~~ 87 (92)
|+.||.+++..- -.|.|+||.+.++++.|.++.-.+++.+|.+
T Consensus 410 Y~iGDvVrvtgf~~~~P~i~F~gR~~~~ls~~GEKl~e~~v~~Av~~ 456 (597)
T PLN02249 410 YRVGDILRVTGFHNSAPQFKFIRRKNVLLSIESDKTDEADLQKAVEN 456 (597)
T ss_pred eecCCEEEEeeccCCCcEEEEEccCCcceecccccCCHHHHHHHHHH
Confidence 789999998543 3689999999999999999999999998876
No 133
>PLN02247 indole-3-acetic acid-amido synthetase
Probab=90.87 E-value=0.65 Score=33.53 Aligned_cols=43 Identities=16% Similarity=0.251 Sum_probs=36.9
Q ss_pred EEcCCeEEEe----cCCcEEEecccCCeEEEccEEechHHHHHHHhh
Q psy4547 45 YNTGDWGYAL----GDGTFEVIGRSDTMVKIRGYTIELQAIEVALRD 87 (92)
Q Consensus 45 ~~tGD~~~~~----~~g~l~~~gR~~~~i~~~G~~v~~~~iE~~l~~ 87 (92)
|+.||+.+.. ..-.|.|++|.+.+..+.|.++.-.++-++|.+
T Consensus 417 YrlGDvv~V~GF~n~~P~~~Fv~R~~~vlsi~gEK~tE~~l~~Av~~ 463 (606)
T PLN02247 417 YRVGDILMVTGFYNNAPQFRFVQRRNVVLSIDTDKTNEEDLLKAVTQ 463 (606)
T ss_pred EecCCEEEEeeecCCCceEEEEecCCceeecccccCCHHHHHHHHHH
Confidence 7899988773 345799999999999999999999999888765
No 134
>PLN02620 indole-3-acetic acid-amido synthetase
Probab=90.43 E-value=0.78 Score=33.17 Aligned_cols=43 Identities=19% Similarity=0.288 Sum_probs=36.7
Q ss_pred EEcCCeEEEe----cCCcEEEecccCCeEEEccEEechHHHHHHHhh
Q psy4547 45 YNTGDWGYAL----GDGTFEVIGRSDTMVKIRGYTIELQAIEVALRD 87 (92)
Q Consensus 45 ~~tGD~~~~~----~~g~l~~~gR~~~~i~~~G~~v~~~~iE~~l~~ 87 (92)
|+.||+.+.. ..-.|.|++|.+.+..+.|.++.-.++-.++.+
T Consensus 423 YrlGDvv~V~Gf~n~~P~~~Fv~R~~~~lsi~gEK~tE~~l~~Av~~ 469 (612)
T PLN02620 423 YRVGDVLRVAGFKNKAPQFSFICRKNVVLSIDSDKTDEVELQNAVKN 469 (612)
T ss_pred EecCCEEEEeeecCCCceEEEEeecCceeecccccCCHHHHHHHHHH
Confidence 7899988874 345699999999999999999999998887764
No 135
>COG1424 BioW Pimeloyl-CoA synthetase [Coenzyme metabolism]
Probab=79.56 E-value=3.6 Score=25.72 Aligned_cols=48 Identities=13% Similarity=0.151 Sum_probs=29.3
Q ss_pred CCCceeEEEec-CcccccccCCCcccccccccCCcccccccceeEEEcCCeEEEe--cCCcEEEecccC
Q psy4547 1 MGTPGDIYIGG-PTLAIGYLNRPDLNKMRFISTPEHLRKTCGVRLYNTGDWGYAL--GDGTFEVIGRSD 66 (92)
Q Consensus 1 ~g~~Gel~v~~-~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~tGD~~~~~--~~g~l~~~gR~~ 66 (92)
||.++|||.+- |.-..||..... .+|+|.-|+-... ..|+++|+.+..
T Consensus 168 p~VvaELC~SDd~dY~TGYvagkk------------------iGY~Rit~lKe~gt~~GgRVfFVd~~~ 218 (239)
T COG1424 168 PGVVAELCWSDDPDYTTGYVAGKK------------------IGYHRITDLKEVGTRYGGRVFFVDDCI 218 (239)
T ss_pred cceeEEEeecCCCcceeeeeecce------------------eeeEEeecccccCCccCcEEEEEcCcc
Confidence 57889998864 555666653221 1566665555442 357788887753
No 136
>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins. For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.
Probab=69.19 E-value=7.5 Score=15.90 Aligned_cols=18 Identities=22% Similarity=0.272 Sum_probs=14.3
Q ss_pred EecCCcEEEecccCCeEE
Q psy4547 53 ALGDGTFEVIGRSDTMVK 70 (92)
Q Consensus 53 ~~~~g~l~~~gR~~~~i~ 70 (92)
.+++|.+++.++....|.
T Consensus 9 v~~~g~i~VaD~~n~rV~ 26 (28)
T PF01436_consen 9 VDSDGNIYVADSGNHRVQ 26 (28)
T ss_dssp EETTSEEEEEECCCTEEE
T ss_pred EeCCCCEEEEECCCCEEE
Confidence 458899999998877765
No 137
>PF10411 DsbC_N: Disulfide bond isomerase protein N-terminus; InterPro: IPR018950 This is the N-terminal domain of the disulphide bond isomerase DsbC. The whole molecule is V-shaped, where each arm is a DsbC monomer of two domains linked by a hinge; and the N-termini of each monomer join to form the dimer interface at the base of the V, so are vital for dimerisation []. DsbC is required for disulphide bond formation and functions as a disulphide bond isomerase during oxidative protein-folding in bacterial periplasm. It also has chaperone activity []. ; PDB: 1EEJ_B 2IYJ_A 1TJD_A 1JZD_B 1JZO_A 1G0T_B 1T3B_A.
Probab=62.65 E-value=9.3 Score=18.64 Aligned_cols=19 Identities=26% Similarity=0.407 Sum_probs=15.5
Q ss_pred cCCeEEEecCCcEEEeccc
Q psy4547 47 TGDWGYALGDGTFEVIGRS 65 (92)
Q Consensus 47 tGD~~~~~~~g~l~~~gR~ 65 (92)
-|.+.+.+++|.+.|.|..
T Consensus 32 ~~~i~Y~~~dg~yli~G~l 50 (57)
T PF10411_consen 32 GGGILYVDEDGRYLIQGQL 50 (57)
T ss_dssp TTEEEEEETTSSEEEES-E
T ss_pred CCeEEEEcCCCCEEEEeEE
Confidence 6778899999999998874
No 138
>PF04784 DUF547: Protein of unknown function, DUF547; InterPro: IPR006869 This is a conserved region found in uncharacterised proteins from Caenorhabditis elegans and Arabidopsis thaliana (Mouse-ear cress).
Probab=61.88 E-value=13 Score=20.89 Aligned_cols=22 Identities=23% Similarity=0.212 Sum_probs=18.6
Q ss_pred CeEEEccEEechHHHHHHHhhC
Q psy4547 67 TMVKIRGYTIELQAIEVALRDY 88 (92)
Q Consensus 67 ~~i~~~G~~v~~~~iE~~l~~~ 88 (92)
....++|..+++.+||+.+...
T Consensus 50 ~~y~Igg~~~SL~dIe~~ILR~ 71 (117)
T PF04784_consen 50 VRYNIGGQRFSLDDIEHGILRG 71 (117)
T ss_pred eEEEECCEEecHHHHHHhhccC
Confidence 3567899999999999988765
No 139
>PF03744 BioW: 6-carboxyhexanoate--CoA ligase; InterPro: IPR005499 This family contains the enzyme 6-carboxyhexanoate--CoA ligase 6.2.1.14 from EC. This enzyme is involved in the first step of biotin synthesis, where it converts pimelate into pimeloyl-CoA []. The enzyme requires magnesium as a cofactor and forms a homodimer [].; GO: 0009102 biotin biosynthetic process
Probab=57.53 E-value=20 Score=23.08 Aligned_cols=19 Identities=21% Similarity=0.510 Sum_probs=12.6
Q ss_pred CCCceeEEEec-Cccccccc
Q psy4547 1 MGTPGDIYIGG-PTLAIGYL 19 (92)
Q Consensus 1 ~g~~Gel~v~~-~~~~~gy~ 19 (92)
||.++|||++- |.=..||.
T Consensus 172 PgiiaELC~SDDP~YtTGYV 191 (239)
T PF03744_consen 172 PGIIAELCWSDDPDYTTGYV 191 (239)
T ss_pred CcceEEEEecCCCCCceEEE
Confidence 67889999873 44444554
No 140
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria. LuxE catalyses the formation of an acyl-protein thiolester from a fatty acid and a protein. This is the second step in the bioluminescent fatty acid reduction system, which converts tetradecanoic acid to the aldehyde substrate of the luciferase-catalysed bioluminescence reaction []. A conserved cysteine found at position 364 in Photobacterium phosphoreum LuxE (Q52100 from SWISSPROT) is thought to be acylated during the transfer of the acyl group from the synthetase subunit to the reductase. The C-terminal of the synthetase is though to act as a flexible arm to transfer acyl groups between the sites of activation and reduction []. A LuxE domain is also found in the Vibrio cholerae RBFN protein (Q06961 from SWISSPROT), which is involved in the biosynthesis of the O-antigen component 3-deoxy-L-glycero-tetronic acid. This entry represents the LuxE domain, which is found in archaeal and bacterial proteins.; GO: 0047474 long-chain fatty acid luciferin component ligase activity, 0008218 bioluminescence
Probab=56.45 E-value=44 Score=22.79 Aligned_cols=33 Identities=42% Similarity=0.668 Sum_probs=22.8
Q ss_pred eEEEcCCeEEEecC--------CcEEEecccCCeEEEccEEe
Q psy4547 43 RLYNTGDWGYALGD--------GTFEVIGRSDTMVKIRGYTI 76 (92)
Q Consensus 43 ~~~~tGD~~~~~~~--------g~l~~~gR~~~~i~~~G~~v 76 (92)
+..-|-|+|....+ .++.++||.+.. .++|...
T Consensus 318 ~~IlTeDlGvl~~~~~c~cr~g~~f~vlGR~~~a-e~RGCs~ 358 (365)
T PF04443_consen 318 GFILTEDLGVLHGDDDCGCRKGKYFEVLGRADGA-EIRGCSL 358 (365)
T ss_pred cEEEEcceeeecCCCCCCCccCCEEEEEeCCCCC-ccCCcHH
Confidence 35779999987654 269999998754 3455443
No 141
>PF08485 Polysacc_syn_2C: Polysaccharide biosynthesis protein C-terminal; InterPro: IPR013692 This domain is found to the C terminus of the IPR003869 from INTERPRO domain in bacterial polysaccharide biosynthesis enzymes including the capsule protein CapD [] and several putative epimerases/dehydratases. ; GO: 0003978 UDP-glucose 4-epimerase activity, 0009103 lipopolysaccharide biosynthetic process
Probab=50.46 E-value=16 Score=17.49 Aligned_cols=22 Identities=5% Similarity=0.061 Sum_probs=18.6
Q ss_pred EccEEechHHHHHHHhhCCCCC
Q psy4547 71 IRGYTIELQAIEVALRDYPVSR 92 (92)
Q Consensus 71 ~~G~~v~~~~iE~~l~~~~~V~ 92 (92)
-+=.+.+..+|.+.|+.+|.|+
T Consensus 27 hNT~rL~ve~~k~lLl~L~~iq 48 (48)
T PF08485_consen 27 HNTERLDVEEMKELLLKLDYIQ 48 (48)
T ss_pred CCccccCHHHHHHHHHhChhcC
Confidence 3567889999999999999885
No 142
>COG0386 BtuE Glutathione peroxidase [Posttranslational modification, protein turnover, chaperones]
Probab=48.31 E-value=20 Score=21.63 Aligned_cols=29 Identities=21% Similarity=0.256 Sum_probs=24.2
Q ss_pred EEecccCCeEEEccEEechHHHHHHHhhC
Q psy4547 60 EVIGRSDTMVKIRGYTIELQAIEVALRDY 88 (92)
Q Consensus 60 ~~~gR~~~~i~~~G~~v~~~~iE~~l~~~ 88 (92)
++++|...+|+.=.-...|.++|..|...
T Consensus 131 FLvdr~G~VV~Rf~p~t~P~d~~~~Ie~l 159 (162)
T COG0386 131 FLVDRDGNVVKRFSPKTKPEDIELAIEKL 159 (162)
T ss_pred EEEcCCCcEEEeeCCCCChhhHHHHHHHH
Confidence 57889999999988889999999877653
No 143
>PF11253 DUF3052: Protein of unknown function (DUF3052); InterPro: IPR021412 This family of proteins with unknown function appears to be restricted to Actinobacteria.
Probab=46.95 E-value=32 Score=19.96 Aligned_cols=42 Identities=19% Similarity=0.117 Sum_probs=30.2
Q ss_pred eEEEcCC----------eEEEecCCcEEEecccCCeEEEccEEechHHHHHHHhhC
Q psy4547 43 RLYNTGD----------WGYALGDGTFEVIGRSDTMVKIRGYTIELQAIEVALRDY 88 (92)
Q Consensus 43 ~~~~tGD----------~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~iE~~l~~~ 88 (92)
-|||.+| +..+.++|.+|++-.+.. +.-.|.|.+|.++-...
T Consensus 51 lWwR~~DgDL~D~LvDa~~~L~d~G~IWvltPK~g----r~g~V~~~~I~eaA~ta 102 (127)
T PF11253_consen 51 LWWRDDDGDLVDALVDARTNLADDGVIWVLTPKAG----RPGHVEPSDIREAAPTA 102 (127)
T ss_pred EEEECCcchHHHHHHHHHhhhcCCCEEEEEccCCC----CCCCCCHHHHHHHHhhc
Confidence 4899987 455678899999875432 23568999998876543
No 144
>PF05452 Clavanin: Clavanin; InterPro: IPR008453 This family consists of clavanin proteins from the haemocytes of the invertebrate Styela clava (Sea squirt), a solitary tunicate. The family is made up of four alpha-helical antimicrobial peptides, clavanins A, B, C and D. The tunicate peptides resemble magainins in size, primary sequence and antibacterial activity. Synthetic clavanin A displays comparable antimicrobial activity to magainins and cecropins. The presence of alpha-helical antimicrobial peptides in the haemocytes of a urochordate suggests that such peptides are primeval effectors of innate immunity in the vertebrate lineage [].; GO: 0005576 extracellular region
Probab=45.81 E-value=8.9 Score=19.70 Aligned_cols=10 Identities=50% Similarity=0.893 Sum_probs=7.6
Q ss_pred cceeEEEcCC
Q psy4547 40 CGVRLYNTGD 49 (92)
Q Consensus 40 ~~~~~~~tGD 49 (92)
.+..||.|||
T Consensus 70 ngkhwydtgd 79 (80)
T PF05452_consen 70 NGKHWYDTGD 79 (80)
T ss_pred CCcccccCCC
Confidence 3446999998
No 145
>TIGR01204 bioW 6-carboxyhexanoate--CoA ligase. Alternate name: pimeloyl-CoA synthase.
Probab=44.52 E-value=37 Score=21.79 Aligned_cols=19 Identities=16% Similarity=0.419 Sum_probs=12.6
Q ss_pred CCCceeEEEec-Cccccccc
Q psy4547 1 MGTPGDIYIGG-PTLAIGYL 19 (92)
Q Consensus 1 ~g~~Gel~v~~-~~~~~gy~ 19 (92)
||.++|||++- |.-..||.
T Consensus 165 pgvvAElC~SDDP~YtTGYV 184 (232)
T TIGR01204 165 PAVVAELCWSDDPDYVTGYV 184 (232)
T ss_pred CCeEEEEEecCCCCCeeEEE
Confidence 57788998873 44455554
No 146
>PRK04306 50S ribosomal protein L21e; Reviewed
Probab=43.01 E-value=48 Score=18.35 Aligned_cols=32 Identities=25% Similarity=0.316 Sum_probs=25.6
Q ss_pred EEEcCCeEEEecCCcE-------EEecccCCeEEEccEE
Q psy4547 44 LYNTGDWGYALGDGTF-------EVIGRSDTMVKIRGYT 75 (92)
Q Consensus 44 ~~~tGD~~~~~~~g~l-------~~~gR~~~~i~~~G~~ 75 (92)
-|.-||.+.+..|+.+ +|.||...++++.|.-
T Consensus 34 ~y~~Gd~V~I~~d~sv~kGmPh~~yhGkTG~V~~v~~~A 72 (98)
T PRK04306 34 EFEEGDKVHIVIDPSVHKGMPHPRFHGKTGTVVGKRGRA 72 (98)
T ss_pred hccCCCEEEEEecCceecCCccccccCCCEEEEeecCeE
Confidence 4889999999988765 5788888888877653
No 147
>PRK01322 6-carboxyhexanoate--CoA ligase; Provisional
Probab=42.27 E-value=49 Score=21.42 Aligned_cols=19 Identities=21% Similarity=0.520 Sum_probs=12.5
Q ss_pred CCCceeEEEec-Cccccccc
Q psy4547 1 MGTPGDIYIGG-PTLAIGYL 19 (92)
Q Consensus 1 ~g~~Gel~v~~-~~~~~gy~ 19 (92)
||.++|||++- |.=..||.
T Consensus 172 pgivAElC~SDDP~YtTGYV 191 (242)
T PRK01322 172 PGVIAELCWSDDPDYTTGYV 191 (242)
T ss_pred CCeEEEEEecCCCCCeeEEE
Confidence 57788999873 44455554
No 148
>PF13642 DUF4144: protein structure with unknown function; PDB: 2L6O_A.
Probab=41.68 E-value=20 Score=19.85 Aligned_cols=46 Identities=7% Similarity=0.091 Sum_probs=25.9
Q ss_pred eEEEcCCeEEEecCCcEEEecc-c--CCeEEEccEEechHHHHHHHhhCC
Q psy4547 43 RLYNTGDWGYALGDGTFEVIGR-S--DTMVKIRGYTIELQAIEVALRDYP 89 (92)
Q Consensus 43 ~~~~tGD~~~~~~~g~l~~~gR-~--~~~i~~~G~~v~~~~iE~~l~~~~ 89 (92)
..+..+|+. +|..|..|.+-. . .......+..+++.+|-+.+++|.
T Consensus 29 ~~~~~~D~L-IDs~G~~y~l~~~~~~~~~l~~~~~~lsl~ev~~LIq~H~ 77 (101)
T PF13642_consen 29 LIWSDDDRL-IDSQGQSYQLKQSNSNKLSLQPSSQQLSLEEVTELIQAHA 77 (101)
T ss_dssp ----TT--E-EETT-EEEEE-T-----TSSEEEEEE--HHHHHHHHHHHH
T ss_pred cCCCCCCEE-EeCCCCEEEeccccccchhcccCCCcccHHHHHHHHHHHH
Confidence 367788887 589998887755 2 223445788999999999988763
No 149
>PF07494 Reg_prop: Two component regulator propeller; InterPro: IPR011110 A large group of two component regulator proteins appear to have the same N-terminal structure of 14 tandem repeats. These repeats show homology to members of IPR002372 from INTERPRO and IPR001680 from INTERPRO indicating that they are likely to form a beta-propeller. This family has been built with artificially high cut-offs in order to avoid overlaps with other beta-propeller families. The fourteen repeats are likely to form two propellers; it is not clear if these structures are likely to recruit other proteins or interact with DNA.; PDB: 3V9F_D 3VA6_B 3OTT_B 4A2M_D 4A2L_B.
Probab=40.76 E-value=28 Score=13.60 Aligned_cols=11 Identities=27% Similarity=0.374 Sum_probs=6.9
Q ss_pred EEecCCcEEEe
Q psy4547 52 YALGDGTFEVI 62 (92)
Q Consensus 52 ~~~~~g~l~~~ 62 (92)
..|.+|.+||-
T Consensus 11 ~~D~~G~lWig 21 (24)
T PF07494_consen 11 YEDSDGNLWIG 21 (24)
T ss_dssp EE-TTSCEEEE
T ss_pred EEcCCcCEEEE
Confidence 35778888874
No 150
>COG4257 Vgb Streptogramin lyase [Defense mechanisms]
Probab=40.72 E-value=56 Score=21.99 Aligned_cols=15 Identities=13% Similarity=-0.066 Sum_probs=11.0
Q ss_pred EEEecCCcEEEeccc
Q psy4547 51 GYALGDGTFEVIGRS 65 (92)
Q Consensus 51 ~~~~~~g~l~~~gR~ 65 (92)
..+|.+|.|||.++.
T Consensus 153 ~vfD~~G~lWFt~q~ 167 (353)
T COG4257 153 AVFDPWGNLWFTGQI 167 (353)
T ss_pred eeeCCCccEEEeecc
Confidence 446788888888773
No 151
>smart00653 eIF2B_5 domain present in translation initiation factor eIF2B and eIF5.
Probab=40.17 E-value=56 Score=18.38 Aligned_cols=30 Identities=30% Similarity=0.398 Sum_probs=18.6
Q ss_pred cCCeEEEecCCcEEEecccCCeEEEccEEechHHHHHHHhh
Q psy4547 47 TGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQAIEVALRD 87 (92)
Q Consensus 47 tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~iE~~l~~ 87 (92)
-|-.+.+++++.+.+.|| +++..|++.|..
T Consensus 46 Lgt~g~id~~~rlii~G~-----------~~~~~i~~~l~~ 75 (110)
T smart00653 46 LGTQGSIDGKGRLIVNGR-----------FTPKKLQDLLRR 75 (110)
T ss_pred hCCceeECCCCeEEEEEe-----------eCHHHHHHHHHH
Confidence 344555555566655554 667788887754
No 152
>COG4014 Uncharacterized protein conserved in archaea [Function unknown]
Probab=38.88 E-value=68 Score=17.49 Aligned_cols=20 Identities=40% Similarity=0.476 Sum_probs=12.5
Q ss_pred eEEEcCCeEEE-----ecCCcEEEe
Q psy4547 43 RLYNTGDWGYA-----LGDGTFEVI 62 (92)
Q Consensus 43 ~~~~tGD~~~~-----~~~g~l~~~ 62 (92)
+|..||-.++. +++|.+|+.
T Consensus 16 rYvnTgTvgrV~dIkkdEdG~~WV~ 40 (97)
T COG4014 16 RYVNTGTVGRVVDIKKDEDGDIWVV 40 (97)
T ss_pred EEeecCceeeEEEEEeecCCceEEE
Confidence 56667766654 666766653
No 153
>PF05278 PEARLI-4: Arabidopsis phospholipase-like protein (PEARLI 4); InterPro: IPR007942 This family contains several phospholipase-like proteins from Arabidopsis thaliana and other members of the Streptophyta which are homologous to PEARLI 4.
Probab=38.53 E-value=49 Score=21.76 Aligned_cols=29 Identities=14% Similarity=0.296 Sum_probs=22.4
Q ss_pred ccCCeEEEccEEechHH---HHHHHhhCCCCC
Q psy4547 64 RSDTMVKIRGYTIELQA---IEVALRDYPVSR 92 (92)
Q Consensus 64 R~~~~i~~~G~~v~~~~---iE~~l~~~~~V~ 92 (92)
.++..|.++|++|.+.. +..+|..||+|+
T Consensus 82 ~ses~V~VngY~Vk~S~~silq~If~KHGDIA 113 (269)
T PF05278_consen 82 ISESIVSVNGYQVKPSQVSILQKIFEKHGDIA 113 (269)
T ss_pred cccceeeECCEEEcHhHHHHHHHHHHhCccHh
Confidence 56677899999998864 566777888874
No 154
>TIGR02804 ExbD_2 TonB system transport protein ExbD, group 2. Members of this family are Gram-negative bacterial inner membrane proteins, generally designated ExbD, related to the TolR family modeled by TIGRFAMs TIGR02801. Members always are encoded next to a protein designated ExbB (TIGR02797), related to the TolQ family modeled by TIGRFAMs TIGR02796. ExbD and ExbB together form a proton channel through which they can harness the proton-motive force to energize TonB, which in turn energizes TonB-dependent receptors in the outer membrane. TonB-dependent receptors with known specificity tend to import siderophores or vitamin B12. A TonB system and Tol-Pal system often will co-exist in a single bacterial genome.
Probab=36.85 E-value=79 Score=17.69 Aligned_cols=28 Identities=14% Similarity=0.173 Sum_probs=18.8
Q ss_pred EEEecCCcEEEecccCCeEEEccEEechHHHHHHHhhC
Q psy4547 51 GYALGDGTFEVIGRSDTMVKIRGYTIELQAIEVALRDY 88 (92)
Q Consensus 51 ~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~iE~~l~~~ 88 (92)
...+++|.+++ +|..++..+++..|.+.
T Consensus 54 v~i~~~g~~~~----------~~~~v~~~~L~~~l~~~ 81 (121)
T TIGR02804 54 ITITADNQLYF----------NDKPISLEELEAEIAQL 81 (121)
T ss_pred EEEECCCCEEE----------CCcccCHHHHHHHHHhh
Confidence 34556666555 56778888888877754
No 155
>PF12503 CMV_1a_C: Cucumber mosaic virus 1a protein C terminal ; InterPro: IPR022184 This domain family is found in viruses, and is approximately 90 amino acids in length. The family is found in association with PF01443 from PFAM, PF01660 from PFAM. There is a conserved GLG sequence motif. 1a protein is the major virulence factor of the (Cucumber mosaic virus. The Ns strain of CMV causes necrotic lesions to Nicotiana spp. while other strains cause systemic mosaic. The determinant of the pathogenesis of these different strains is the specific amino acid residue at the 461 residue of the 1a protein. ; GO: 0008168 methyltransferase activity, 0016817 hydrolase activity, acting on acid anhydrides
Probab=36.06 E-value=14 Score=19.76 Aligned_cols=19 Identities=26% Similarity=0.401 Sum_probs=12.7
Q ss_pred ccCCeEEE---ccEEechHHHH
Q psy4547 64 RSDTMVKI---RGYTIELQAIE 82 (92)
Q Consensus 64 R~~~~i~~---~G~~v~~~~iE 82 (92)
|.|++|++ .|....|..+|
T Consensus 26 ~vD~lVNvHf~~GrWm~P~~~~ 47 (85)
T PF12503_consen 26 RVDPLVNVHFPNGRWMYPEGYE 47 (85)
T ss_pred eccccEEEEecCCceecCCCeE
Confidence 67777776 67777666543
No 156
>PTZ00189 60S ribosomal protein L21; Provisional
Probab=33.51 E-value=79 Score=19.15 Aligned_cols=32 Identities=16% Similarity=0.280 Sum_probs=23.9
Q ss_pred EEEcCCeEEEecCCcE-------EEecccCCeEEEccEE
Q psy4547 44 LYNTGDWGYALGDGTF-------EVIGRSDTMVKIRGYT 75 (92)
Q Consensus 44 ~~~tGD~~~~~~~g~l-------~~~gR~~~~i~~~G~~ 75 (92)
-|.-||++.+.-|+.+ +|.||...++++.|.-
T Consensus 33 ~yk~GD~VdIk~d~svqkGMPhk~YHGkTG~V~nv~~~A 71 (160)
T PTZ00189 33 TFKVGDYVDIVVDSAVHKGMPYKYYHGRTGRVFNVTPRA 71 (160)
T ss_pred HccCCCEEEEEecCCeecCCCcccccCCCeEEEeecCeE
Confidence 4888999999888755 4777777777766553
No 157
>PF06739 SBBP: Beta-propeller repeat; InterPro: IPR010620 This family is related to IPR001680 from INTERPRO and is likely to also form a beta-propeller. SBBP stands for Seven Bladed Beta Propeller.
Probab=31.75 E-value=45 Score=14.72 Aligned_cols=15 Identities=20% Similarity=0.295 Sum_probs=11.8
Q ss_pred EEecCCcEEEecccC
Q psy4547 52 YALGDGTFEVIGRSD 66 (92)
Q Consensus 52 ~~~~~g~l~~~gR~~ 66 (92)
..|.+|.+++.|-.+
T Consensus 19 avD~~GNiYv~G~T~ 33 (38)
T PF06739_consen 19 AVDSNGNIYVTGYTN 33 (38)
T ss_pred EECCCCCEEEEEeec
Confidence 368889999998654
No 158
>KOG2768|consensus
Probab=31.49 E-value=63 Score=20.63 Aligned_cols=30 Identities=27% Similarity=0.378 Sum_probs=22.3
Q ss_pred cCCeEEEecCCcEEEecccCCeEEEccEEechHHHHHHHhh
Q psy4547 47 TGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQAIEVALRD 87 (92)
Q Consensus 47 tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~iE~~l~~ 87 (92)
.|-.|.+|.++.|.+.|| ..+.++|++|+.
T Consensus 147 LgTsGSidg~~rLviKGr-----------fq~kq~e~VLRr 176 (231)
T KOG2768|consen 147 LGTSGSIDGQQRLVIKGR-----------FQQKQFENVLRR 176 (231)
T ss_pred hccccccCCCceEEEecc-----------ccHHHHHHHHHH
Confidence 455677788888888877 566788888765
No 159
>PF11848 DUF3368: Domain of unknown function (DUF3368); InterPro: IPR021799 This domain is functionally uncharacterised. This domain is found in bacteria and archaea. This presumed domain is about 50 amino acids in length.
Probab=30.85 E-value=47 Score=15.46 Aligned_cols=19 Identities=32% Similarity=0.419 Sum_probs=14.6
Q ss_pred EEccEEechHHHHHHHhhC
Q psy4547 70 KIRGYTIELQAIEVALRDY 88 (92)
Q Consensus 70 ~~~G~~v~~~~iE~~l~~~ 88 (92)
+-.|.++++..++.+|...
T Consensus 29 ~~~g~~is~~l~~~~L~~~ 47 (48)
T PF11848_consen 29 QQAGFRISPKLIEEILRRA 47 (48)
T ss_pred HHcCcccCHHHHHHHHHHc
Confidence 3478899999988887653
No 160
>PF11521 TFIIE-A_C-term: C-terminal general transcription factor TFIIE alpha; InterPro: IPR021600 TFIIE is compiled of two subunits, alpha and beta. This family of proteins are the C-terminal domain of the alpha subunit of the protein which is the largest subunit and contains several functional domains which are important for basal transcription and cell growth. The C-terminal end of the protein binds directly to the amino-terminal PH domain of p62/Tfb1 (of IIH) which is involved in the recruitment of the general transcription factor IIH to the transcription preinitiation complex. P53 competes for the same binding site as TFIIE alpha which shows their structural similarity. Like p53, TFIIE alpha 336-439 can activate transcription in vivo []. ; PDB: 2RNR_A 2RNQ_A 2JTX_A.
Probab=29.87 E-value=98 Score=16.65 Aligned_cols=17 Identities=18% Similarity=0.307 Sum_probs=14.3
Q ss_pred CCeEEEccEEechHHHH
Q psy4547 66 DTMVKIRGYTIELQAIE 82 (92)
Q Consensus 66 ~~~i~~~G~~v~~~~iE 82 (92)
+-+|.++|+.+...+|-
T Consensus 40 ~p~V~V~Gr~~~~~eVt 56 (86)
T PF11521_consen 40 DPTVMVAGRPYPYSEVT 56 (86)
T ss_dssp S-EEEETTEEEEHHHHH
T ss_pred CceEEECCEEeehhhcC
Confidence 45788999999999998
No 161
>KOG0640|consensus
Probab=29.09 E-value=1.7e+02 Score=20.16 Aligned_cols=37 Identities=14% Similarity=0.152 Sum_probs=25.8
Q ss_pred EEEecCCcEEEecccCCeEEE-ccEEechHHHHHHHhhCC
Q psy4547 51 GYALGDGTFEVIGRSDTMVKI-RGYTIELQAIEVALRDYP 89 (92)
Q Consensus 51 ~~~~~~g~l~~~gR~~~~i~~-~G~~v~~~~iE~~l~~~~ 89 (92)
+++.+.|.+|+.+-+|..||+ .| |+-.=|+..-..|.
T Consensus 267 V~Ys~t~~lYvTaSkDG~IklwDG--VS~rCv~t~~~AH~ 304 (430)
T KOG0640|consen 267 VRYSSTGSLYVTASKDGAIKLWDG--VSNRCVRTIGNAHG 304 (430)
T ss_pred EEecCCccEEEEeccCCcEEeecc--ccHHHHHHHHhhcC
Confidence 556788999999999999997 66 44444444444443
No 162
>PF07338 DUF1471: Protein of unknown function (DUF1471); InterPro: IPR010854 This entry consists of several hypothetical Enterobacterial proteins of around 90 residues in length. Some of the proteins are annotated as ydgH precursors and contain two copies of this region, one at the N terminus and the other at the C terminus. The function of this family is unknown.; PDB: 2NOC_A 2JNA_B 4EVU_B.
Probab=28.94 E-value=61 Score=15.72 Aligned_cols=20 Identities=20% Similarity=0.164 Sum_probs=15.9
Q ss_pred eEEEccEEechHHHHHHHhh
Q psy4547 68 MVKIRGYTIELQAIEVALRD 87 (92)
Q Consensus 68 ~i~~~G~~v~~~~iE~~l~~ 87 (92)
.|.+.|..-+|.++++.|.+
T Consensus 7 ~Isvs~~~~s~~d~~~~la~ 26 (56)
T PF07338_consen 7 TISVSGNFGSPDDAEEALAK 26 (56)
T ss_dssp EEEEEEECSSHHHHHHHHHH
T ss_pred EEEEccccCCHHHHHHHHHH
Confidence 56677777899999998864
No 163
>PRK11657 dsbG disulfide isomerase/thiol-disulfide oxidase; Provisional
Probab=28.43 E-value=1.1e+02 Score=19.72 Aligned_cols=33 Identities=21% Similarity=0.231 Sum_probs=23.9
Q ss_pred CCeEEEecCCcEEEecccCCeEEEccEEechHHHHH
Q psy4547 48 GDWGYALGDGTFEVIGRSDTMVKIRGYTIELQAIEV 83 (92)
Q Consensus 48 GD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~iE~ 83 (92)
|...+.++||.+.|.|.. +..+|.++.-..+++
T Consensus 58 ~~i~Y~t~dg~y~i~G~l---~d~~~~nlT~~~~~~ 90 (251)
T PRK11657 58 GVTIYLTPDGKHAISGYM---YDEKGENLSEALLEK 90 (251)
T ss_pred ceEEEEcCCCCEEEEEEE---EcCCCCccCHHHHHH
Confidence 346788999999999875 344577777766665
No 164
>PF02563 Poly_export: Polysaccharide biosynthesis/export protein; InterPro: IPR003715 The extracellular polysaccharide colanic acid (CA) is produced by species of the family Enterobacteriaceae. In Escherichia coli (strain K12) the CA cluster comprises 19 genes. The wzx gene encodes a protein with multiple transmembrane segments that may function in export of the CA repeat unit from the cytoplasm into the periplasm in a process analogous to O-unit export. The CA gene clusters may be involved in the export of polysaccharide from the cell [].; GO: 0015159 polysaccharide transmembrane transporter activity, 0015774 polysaccharide transport, 0016020 membrane; PDB: 2W8I_E 2W8H_E 2J58_D.
Probab=28.40 E-value=95 Score=16.02 Aligned_cols=32 Identities=28% Similarity=0.266 Sum_probs=17.6
Q ss_pred EEEecCCcEEEecccCCeEEEccEEechHHHHHHHh
Q psy4547 51 GYALGDGTFEVIGRSDTMVKIRGYTIELQAIEVALR 86 (92)
Q Consensus 51 ~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~iE~~l~ 86 (92)
...++||.+.+ ..-..|++.|.. +.|+++.|.
T Consensus 33 ~~V~~dG~I~l--P~iG~v~v~G~T--~~e~~~~I~ 64 (82)
T PF02563_consen 33 YTVDPDGTISL--PLIGPVKVAGLT--LEEAEEEIK 64 (82)
T ss_dssp EE--TTSEEEE--TTTEEEE-TT----HHHHHHHHH
T ss_pred eEECCCCcEee--cccceEEECCCC--HHHHHHHHH
Confidence 44578888776 455568888854 455666554
No 165
>cd02969 PRX_like1 Peroxiredoxin (PRX)-like 1 family; hypothetical proteins that show sequence similarity to PRXs. Members of this group contain a conserved cysteine that aligns to the first cysteine in the CXXC motif of TRX. This does not correspond to the peroxidatic cysteine found in PRXs, which aligns to the second cysteine in the CXXC motif of TRX. In addition, these proteins do not contain the other two conserved residues of the catalytic triad of PRX. PRXs confer a protective antioxidant role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either thioredoxin, glutathione, trypanothione and AhpF.
Probab=28.22 E-value=1.1e+02 Score=17.98 Aligned_cols=41 Identities=22% Similarity=0.133 Sum_probs=22.5
Q ss_pred cCCeEEEecCCcEEEecccCCeEEEccEEechHHHHHHHhh
Q psy4547 47 TGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQAIEVALRD 87 (92)
Q Consensus 47 tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~iE~~l~~ 87 (92)
+.....+|++|.+.+.+..++............++.++|.+
T Consensus 110 ~P~~~lid~~G~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 150 (171)
T cd02969 110 TPDFFLFDPDGKLVYRGRIDDSRPGNDPPVTGRDLRAALDA 150 (171)
T ss_pred CCcEEEECCCCeEEEeecccCCcccccccccHHHHHHHHHH
Confidence 34455566677766665544433322234566667776654
No 166
>PLN00190 60S ribosomal protein L21; Provisional
Probab=27.02 E-value=96 Score=18.77 Aligned_cols=31 Identities=16% Similarity=0.249 Sum_probs=22.7
Q ss_pred EEEcCCeEEEecCCcE-------EEecccCCeEEEccE
Q psy4547 44 LYNTGDWGYALGDGTF-------EVIGRSDTMVKIRGY 74 (92)
Q Consensus 44 ~~~tGD~~~~~~~g~l-------~~~gR~~~~i~~~G~ 74 (92)
-|.-||++.+.-|+.+ ++.||...++++.|.
T Consensus 33 ~yk~GD~VdIk~~~svqKGMPhk~YHGkTG~V~nv~~~ 70 (158)
T PLN00190 33 TFKVGDYVDIKVNGAIHKGMPHKFYHGRTGIVWNVTKR 70 (158)
T ss_pred HhcCCCEEEEEecCCeecCCCcccccCCCeEEEeecCc
Confidence 4888999999888654 467777777666554
No 167
>PF13180 PDZ_2: PDZ domain; PDB: 2L97_A 1Y8T_A 2Z9I_A 1LCY_A 2PZD_B 2P3W_A 1VCW_C 1TE0_B 1SOZ_C 1SOT_C ....
Probab=26.20 E-value=88 Score=15.86 Aligned_cols=23 Identities=17% Similarity=0.258 Sum_probs=16.0
Q ss_pred CCeEEEccEEe-chHHHHHHHhhC
Q psy4547 66 DTMVKIRGYTI-ELQAIEVALRDY 88 (92)
Q Consensus 66 ~~~i~~~G~~v-~~~~iE~~l~~~ 88 (92)
|-.++++|..| +..++.+.+..+
T Consensus 36 D~I~~ing~~v~~~~~~~~~l~~~ 59 (82)
T PF13180_consen 36 DIILAINGKPVNSSEDLVNILSKG 59 (82)
T ss_dssp EEEEEETTEESSSHHHHHHHHHCS
T ss_pred cEEEEECCEEcCCHHHHHHHHHhC
Confidence 34566789988 677777777544
No 168
>COG1504 Uncharacterized conserved protein [Function unknown]
Probab=25.93 E-value=53 Score=18.72 Aligned_cols=18 Identities=22% Similarity=0.325 Sum_probs=15.4
Q ss_pred EEechHHHHHHHhhCCCC
Q psy4547 74 YTIELQAIEVALRDYPVS 91 (92)
Q Consensus 74 ~~v~~~~iE~~l~~~~~V 91 (92)
++++++|+|..+..-|.|
T Consensus 47 Hkl~~eEle~~lee~~E~ 64 (121)
T COG1504 47 HKLALEELEELLEEGPEV 64 (121)
T ss_pred cccCHHHHHHHHhcCCcE
Confidence 899999999999876654
No 169
>PRK09993 C-lysozyme inhibitor; Provisional
Probab=25.77 E-value=56 Score=19.60 Aligned_cols=32 Identities=22% Similarity=0.361 Sum_probs=27.4
Q ss_pred cEEEecccCCeEEEccEEechHHHHHHHhhCCC
Q psy4547 58 TFEVIGRSDTMVKIRGYTIELQAIEVALRDYPV 90 (92)
Q Consensus 58 ~l~~~gR~~~~i~~~G~~v~~~~iE~~l~~~~~ 90 (92)
.+.+++..|+. .+.|..|--+.+--.|..||.
T Consensus 117 ~l~WL~~~d~~-sidg~tvl~aaltgsl~nhp~ 148 (153)
T PRK09993 117 KLTWLNVNDAL-SIDGKTVLFAALTGSLENHPD 148 (153)
T ss_pred heeeecCCCCc-ccccceeeHHhhhCchhcCcc
Confidence 47778888877 899999999999998999985
No 170
>PF01060 DUF290: Transthyretin-like family; InterPro: IPR001534 This new apparently nematode-specific protein family has been called family 2 []. The proteins show weak similarity to transthyretin (formerly called prealbumin) which transports thyroid hormones. The specific function of this protein is unknown.; GO: 0005615 extracellular space
Probab=25.77 E-value=86 Score=16.19 Aligned_cols=20 Identities=25% Similarity=0.466 Sum_probs=15.0
Q ss_pred EEEecCCcEEEecccCCeEE
Q psy4547 51 GYALGDGTFEVIGRSDTMVK 70 (92)
Q Consensus 51 ~~~~~~g~l~~~gR~~~~i~ 70 (92)
..-+++|.|.+.|..++...
T Consensus 33 ~~Td~~G~F~l~G~~~e~~~ 52 (80)
T PF01060_consen 33 TKTDSDGNFELSGSTNEFTT 52 (80)
T ss_pred EEECCCceEEEEEEccCCcc
Confidence 44588899999998877533
No 171
>PF00403 HMA: Heavy-metal-associated domain; InterPro: IPR006121 Proteins that transport heavy metals in micro-organisms and mammals share similarities in their sequences and structures. These proteins provide an important focus for research, some being involved in bacterial resistance to toxic metals, such as lead and cadmium, while others are involved in inherited human syndromes, such as Wilson's and Menke's diseases []. A conserved domain has been found in a number of these heavy metal transport or detoxification proteins []. The domain, which has been termed Heavy-Metal-Associated (HMA), contains two conserved cysteines that are probably involved in metal binding. Structure solution of the fourth HMA domain of the Menke's copper transporting ATPase shows a well-defined structure comprising a four-stranded antiparallel beta-sheet and two alpha helices packed in an alpha-beta sandwich fold []. This fold is common to other domains and is classified as "ferredoxin-like".; GO: 0046872 metal ion binding, 0030001 metal ion transport; PDB: 2VOY_A 1P6T_A 1KQK_A 2RML_A 1JWW_A 3K7R_F 1FES_A 1CC8_A 1FD8_A 2GGP_A ....
Probab=25.37 E-value=45 Score=15.89 Aligned_cols=14 Identities=29% Similarity=0.356 Sum_probs=11.2
Q ss_pred hHHHHHHHhhCCCC
Q psy4547 78 LQAIEVALRDYPVS 91 (92)
Q Consensus 78 ~~~iE~~l~~~~~V 91 (92)
...|++.|.++|+|
T Consensus 13 ~~~v~~~l~~~~GV 26 (62)
T PF00403_consen 13 AKKVEKALSKLPGV 26 (62)
T ss_dssp HHHHHHHHHTSTTE
T ss_pred HHHHHHHHhcCCCC
Confidence 45788889988887
No 172
>PF13453 zf-TFIIB: Transcription factor zinc-finger
Probab=24.68 E-value=81 Score=13.99 Aligned_cols=16 Identities=19% Similarity=0.204 Sum_probs=12.5
Q ss_pred EccEEechHHHHHHHh
Q psy4547 71 IRGYTIELQAIEVALR 86 (92)
Q Consensus 71 ~~G~~v~~~~iE~~l~ 86 (92)
-.|..++..|+++.+.
T Consensus 25 C~G~W~d~~el~~~~e 40 (41)
T PF13453_consen 25 CGGIWFDAGELEKLLE 40 (41)
T ss_pred CCeEEccHHHHHHHHh
Confidence 3788888888888764
No 173
>PF04126 Cyclophil_like: Cyclophilin-like; InterPro: IPR007256 Proteins of this family have no known function.; PDB: 2KA0_A 1ZX8_C 2NNZ_A.
Probab=24.13 E-value=74 Score=18.00 Aligned_cols=19 Identities=21% Similarity=0.387 Sum_probs=13.6
Q ss_pred EEEcCCeEEEecCCcEEEe
Q psy4547 44 LYNTGDWGYALGDGTFEVI 62 (92)
Q Consensus 44 ~~~tGD~~~~~~~g~l~~~ 62 (92)
-+..||++++-+.+.|.|.
T Consensus 59 ~~~~GDi~Yw~pg~~l~if 77 (120)
T PF04126_consen 59 SVEAGDIAYWPPGGALAIF 77 (120)
T ss_dssp SB-TTEEEEECCCTEEEEE
T ss_pred cccCceEEEeCCCCEEEEE
Confidence 3589999999887776543
No 174
>COG3592 Uncharacterized conserved protein [Function unknown]
Probab=24.07 E-value=69 Score=16.58 Aligned_cols=31 Identities=16% Similarity=0.210 Sum_probs=21.0
Q ss_pred CcEEEecccCCeEEEccEEechHHHHHHHhhCCC
Q psy4547 57 GTFEVIGRSDTMVKIRGYTIELQAIEVALRDYPV 90 (92)
Q Consensus 57 g~l~~~gR~~~~i~~~G~~v~~~~iE~~l~~~~~ 90 (92)
..++-++|+.= +.=..+++++|+.++.++|.
T Consensus 36 ~~vF~~~rkPW---I~Pd~~~ve~i~~vi~sCPS 66 (74)
T COG3592 36 PKVFNLGRKPW---IMPDAVDVEEIVKVIDTCPS 66 (74)
T ss_pred HhhcccCCCCc---cCCCCCCHHHHHHHHHhCCc
Confidence 34454677651 13346889999999999884
No 175
>PF12757 DUF3812: Protein of unknown function (DUF3812); InterPro: IPR024527 This family of fungal proteins represents the eisosome 1 family. Eisosome protein 1 is required for normal formation of eisosomes, large cytoplasmic protein assemblies that localize to specialised domains on plasma membrane and mark the site of endocytosis [].
Probab=23.75 E-value=80 Score=18.12 Aligned_cols=22 Identities=14% Similarity=0.335 Sum_probs=16.7
Q ss_pred CCeEEE-ccEEechHHHHHHHhh
Q psy4547 66 DTMVKI-RGYTIELQAIEVALRD 87 (92)
Q Consensus 66 ~~~i~~-~G~~v~~~~iE~~l~~ 87 (92)
...|++ +|..+++.+|+.+...
T Consensus 58 ~gkV~lGGGl~m~~~evd~IA~~ 80 (126)
T PF12757_consen 58 AGKVNLGGGLFMDQEEVDAIARK 80 (126)
T ss_pred CCeeeCCCCcccCHHHHHHHHHH
Confidence 345666 7889999999987654
No 176
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=23.27 E-value=54 Score=22.70 Aligned_cols=48 Identities=25% Similarity=0.414 Sum_probs=30.3
Q ss_pred EEEcCCeEEEecCCcE-----EE---ecccCCeEEE-ccEEechHHHHHHHhhCCCC
Q psy4547 44 LYNTGDWGYALGDGTF-----EV---IGRSDTMVKI-RGYTIELQAIEVALRDYPVS 91 (92)
Q Consensus 44 ~~~tGD~~~~~~~g~l-----~~---~gR~~~~i~~-~G~~v~~~~iE~~l~~~~~V 91 (92)
+...||.+-.-.+|.| .+ .|..-..+.. -|..+.|++||++|.+.|.+
T Consensus 76 l~~pgdkVLv~~nG~FG~R~~~ia~~~g~~v~~~~~~wg~~v~p~~v~~~L~~~~~~ 132 (383)
T COG0075 76 LVEPGDKVLVVVNGKFGERFAEIAERYGAEVVVLEVEWGEAVDPEEVEEALDKDPDI 132 (383)
T ss_pred ccCCCCeEEEEeCChHHHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhcCCCc
Confidence 4456776666666542 11 2233333333 57899999999999988765
No 177
>PRK10606 btuE putative glutathione peroxidase; Provisional
Probab=23.20 E-value=73 Score=19.46 Aligned_cols=29 Identities=7% Similarity=0.126 Sum_probs=23.5
Q ss_pred EEEecccCCeEEEccEEechHH--HHHHHhh
Q psy4547 59 FEVIGRSDTMVKIRGYTIELQA--IEVALRD 87 (92)
Q Consensus 59 l~~~gR~~~~i~~~G~~v~~~~--iE~~l~~ 87 (92)
=++++|....|+.-+-.+.|.+ ||+.|.+
T Consensus 149 KFLv~~~G~vv~r~~~~~~p~~~~i~~~i~~ 179 (183)
T PRK10606 149 KFLVGRDGQVIQRFSPDMTPEDPIVMESIKL 179 (183)
T ss_pred EEEECCCCcEEEEECCCCCCCHHHHHHHHHH
Confidence 4678899999999888888887 8887764
No 178
>PF02680 DUF211: Uncharacterized ArCR, COG1888; InterPro: IPR003831 This entry describes proteins of unknown function.; PDB: 3BPD_I 2RAQ_F 2X3D_E.
Probab=22.94 E-value=69 Score=17.64 Aligned_cols=23 Identities=22% Similarity=0.388 Sum_probs=17.3
Q ss_pred EEEccEEechHHHHHHHhhCCCC
Q psy4547 69 VKIRGYTIELQAIEVALRDYPVS 91 (92)
Q Consensus 69 i~~~G~~v~~~~iE~~l~~~~~V 91 (92)
|.+.|..+.-.+|+++|..+.++
T Consensus 51 itiEG~~id~d~i~~~Ie~~Gg~ 73 (95)
T PF02680_consen 51 ITIEGDDIDFDEIKEAIEELGGV 73 (95)
T ss_dssp EEEEESSE-HHHHHHHHHHTT-E
T ss_pred EEEEeCCCCHHHHHHHHHHcCCe
Confidence 34589999999999999887653
No 179
>PRK15228 fimbrial protein SefA; Provisional
Probab=22.78 E-value=1.5e+02 Score=17.43 Aligned_cols=24 Identities=21% Similarity=0.253 Sum_probs=17.5
Q ss_pred eEEEcCC----------eEEEecCCcEEEecccC
Q psy4547 43 RLYNTGD----------WGYALGDGTFEVIGRSD 66 (92)
Q Consensus 43 ~~~~tGD----------~~~~~~~g~l~~~gR~~ 66 (92)
+.|.+|| +.+.+..|...|.||.+
T Consensus 77 ~V~v~Gd~~~~SGGl~TiPF~n~aGQ~~fRGR~~ 110 (165)
T PRK15228 77 SVSIAGKGASVSGGVATVPFVDGQGQPVFRGRIQ 110 (165)
T ss_pred eEEEecCCccccCceEEEeeecCCCceeEecccc
Confidence 5778887 33446668888999976
No 180
>KOG1556|consensus
Probab=22.44 E-value=44 Score=21.87 Aligned_cols=11 Identities=36% Similarity=0.287 Sum_probs=8.6
Q ss_pred eeEEEcCCeEE
Q psy4547 42 VRLYNTGDWGY 52 (92)
Q Consensus 42 ~~~~~tGD~~~ 52 (92)
.|||+||-.-+
T Consensus 93 vGWYhTGPkl~ 103 (309)
T KOG1556|consen 93 VGWYHTGPKLR 103 (309)
T ss_pred eeeeccCCccc
Confidence 58999998544
No 181
>PHA00691 hypothetical protein
Probab=22.42 E-value=1.1e+02 Score=15.19 Aligned_cols=27 Identities=26% Similarity=0.332 Sum_probs=17.3
Q ss_pred ecCCcEEEecccCC-eEEEccEEechHH
Q psy4547 54 LGDGTFEVIGRSDT-MVKIRGYTIELQA 80 (92)
Q Consensus 54 ~~~g~l~~~gR~~~-~i~~~G~~v~~~~ 80 (92)
.++|.+|++-.++. +|-++|...++.+
T Consensus 10 ~ENGr~WVL~K~~~Y~V~vSG~THST~D 37 (68)
T PHA00691 10 YENGRVWVLKKSDSYTVFVSGVTHSTSD 37 (68)
T ss_pred ccCCeEEEEEeCCcEEEEEecccccccc
Confidence 46788888875543 2445787766543
No 182
>KOG3988|consensus
Probab=22.15 E-value=1.1e+02 Score=20.78 Aligned_cols=31 Identities=19% Similarity=0.228 Sum_probs=21.6
Q ss_pred ecccCCeEEEccEE-echHHHHHHHhhCCCCC
Q psy4547 62 IGRSDTMVKIRGYT-IELQAIEVALRDYPVSR 92 (92)
Q Consensus 62 ~gR~~~~i~~~G~~-v~~~~iE~~l~~~~~V~ 92 (92)
.+|.--.|-++|.. -.+.-..+.|-+||+||
T Consensus 66 y~~~mplIFiGGVPRSGTTLMRAmLDAHPdVR 97 (378)
T KOG3988|consen 66 YNRTMPLIFIGGVPRSGTTLMRAMLDAHPDVR 97 (378)
T ss_pred hcccCceEEEcCCCCCchHHHHHHHhcCCCcc
Confidence 45666666677774 44566677777999997
No 183
>PF08478 POTRA_1: POTRA domain, FtsQ-type; InterPro: IPR013685 FtsQ/DivIB bacterial division proteins (IPR005548 from INTERPRO) contain an N-terminal POTRA domain (for polypeptide-transport-associated domain). This is found in different types of proteins, usually associated with a transmembrane beta-barrel. FtsQ/DivIB may have chaperone-like roles, which has also been postulated for the POTRA domain in other contexts []. ; PDB: 2ALJ_A 2VH1_B 3J00_Z 2VH2_B.
Probab=22.13 E-value=17 Score=17.82 Aligned_cols=17 Identities=29% Similarity=0.520 Sum_probs=9.6
Q ss_pred EechHHHHHHHhhCCCC
Q psy4547 75 TIELQAIEVALRDYPVS 91 (92)
Q Consensus 75 ~v~~~~iE~~l~~~~~V 91 (92)
.+++..+++.|.++|.|
T Consensus 33 ~~~~~~~~~~l~~~p~V 49 (69)
T PF08478_consen 33 SLDLKKIEQRLEKLPWV 49 (69)
T ss_dssp CSHHHHHHHCCCCTTTE
T ss_pred EECHHHHHHHHHcCCCE
Confidence 34555666666666554
No 184
>PF12419 DUF3670: SNF2 Helicase protein ; InterPro: IPR022138 This domain family is found in bacteria, archaea and eukaryotes, and is approximately 140 amino acids in length. The family is found in association with PF00271 from PFAM, PF00176 from PFAM. Most of the proteins in this family are annotated as SNF2 helicases but there is little accompanying literature to confirm this.
Probab=21.99 E-value=99 Score=17.94 Aligned_cols=25 Identities=20% Similarity=0.421 Sum_probs=14.7
Q ss_pred ecccCCeEEEccEE--echHHHHHHHh
Q psy4547 62 IGRSDTMVKIRGYT--IELQAIEVALR 86 (92)
Q Consensus 62 ~gR~~~~i~~~G~~--v~~~~iE~~l~ 86 (92)
+......|+++|+. +.+.++++++.
T Consensus 93 ~~~~~~LV~~rg~WV~ld~~~l~~~~~ 119 (141)
T PF12419_consen 93 VEQKRPLVRFRGRWVELDPEELRRALA 119 (141)
T ss_pred HHcCCCeEEECCEEEEECHHHHHHHHH
Confidence 34556667776663 45666666554
No 185
>cd00136 PDZ PDZ domain, also called DHR (Dlg homologous region) or GLGF (after a conserved sequence motif). Many PDZ domains bind C-terminal polypeptides, though binding to internal (non-C-terminal) polypeptides and even to lipids has been demonstrated. Heterodimerization through PDZ-PDZ domain interactions adds to the domain's versatility, and PDZ domain-mediated interactions may be modulated dynamically through target phosphorylation. Some PDZ domains play a role in scaffolding supramolecular complexes. PDZ domains are found in diverse signaling proteins in bacteria, archebacteria, and eurkayotes. This CD contains two distinct structural subgroups with either a N- or C-terminal beta-strand forming the peptide-binding groove base. The circular permutation placing the strand on the N-terminus appears to be found in Eumetazoa only, while the C-terminal variant is found in all three kingdoms of life, and seems to co-occur with protease domains. PDZ domains have been named after PSD95(pos
Probab=21.86 E-value=1.1e+02 Score=14.59 Aligned_cols=24 Identities=13% Similarity=0.308 Sum_probs=16.0
Q ss_pred CCeEEEccEEech---HHHHHHHhhCC
Q psy4547 66 DTMVKIRGYTIEL---QAIEVALRDYP 89 (92)
Q Consensus 66 ~~~i~~~G~~v~~---~~iE~~l~~~~ 89 (92)
|..++++|..+.. .++.+.|..++
T Consensus 35 D~I~~Ing~~v~~~~~~~~~~~l~~~~ 61 (70)
T cd00136 35 DVILAVNGTDVKNLTLEDVAELLKKEV 61 (70)
T ss_pred CEEEEECCEECCCCCHHHHHHHHhhCC
Confidence 4455678887755 57777777654
No 186
>KOG2863|consensus
Probab=21.62 E-value=1.1e+02 Score=21.47 Aligned_cols=19 Identities=21% Similarity=0.366 Sum_probs=15.7
Q ss_pred cEEEecccCCeEEEccEEec
Q psy4547 58 TFEVIGRSDTMVKIRGYTIE 77 (92)
Q Consensus 58 ~l~~~gR~~~~i~~~G~~v~ 77 (92)
.++++|++. +|+++|.+|.
T Consensus 103 NIyYlG~ag-Vv~~~gvRIg 121 (456)
T KOG2863|consen 103 NIYYLGYAG-VVNFGGVRIG 121 (456)
T ss_pred ceEEeeecc-eEEECCEEEe
Confidence 588899875 8899999875
No 187
>PF07193 DUF1408: Protein of unknown function (DUF1408); InterPro: IPR009848 This entry is represented by Bacteriophage bIL285, Orf11. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This family consists of several hypothetical Lactococcus lactis and related phage proteins of around 75 residues in length. The function of this family is unknown.
Probab=21.35 E-value=1.1e+02 Score=15.62 Aligned_cols=15 Identities=20% Similarity=0.337 Sum_probs=11.6
Q ss_pred EecCCcEEEecccCC
Q psy4547 53 ALGDGTFEVIGRSDT 67 (92)
Q Consensus 53 ~~~~g~l~~~gR~~~ 67 (92)
..+||.+++..|+..
T Consensus 40 ~r~dgs~y~~~r~~~ 54 (75)
T PF07193_consen 40 ERPDGSMYMTSRKKN 54 (75)
T ss_pred EcCCCeEEEEEcccc
Confidence 357899999988753
No 188
>PF01873 eIF-5_eIF-2B: Domain found in IF2B/IF5; InterPro: IPR002735 The beta subunit of archaeal and eukaryotic translation initiation factor 2 (IF2beta) and the N-terminal domain of translation initiation factor 5 (IF5) show significant sequence homology []. Archaeal IF2beta contains two independent structural domains: an N-terminal mixed alpha/beta core domain (topological similarity to the common core of ribosomal proteins L23 and L15e), and a C-terminal domain consisting of a zinc-binding C4 finger []. Archaeal IF2beta is a ribosome-dependent GTPase that stimulates the binding of initiator Met-tRNA(i)(Met) to the ribosomes, even in the absence of other factors []. The C-terminal domain of eukaryotic IF5 is involved in the formation of the multi-factor complex (MFC), an important intermediate for the 43S pre-initiation complex assembly []. IF5 interacts directly with IF1, IF2beta and IF3c, which together with IF2-bound Met-tRNA(i)(Met) form the MFC. This entry represents both the N-terminal and zinc-binding domains of IF2, as well as a domain in IF5.; GO: 0003743 translation initiation factor activity, 0006413 translational initiation; PDB: 2DCU_B 2D74_B 2E9H_A 2G2K_A 1NEE_A 3CW2_L 2QMU_C 3V11_C 2NXU_A 2QN6_C ....
Probab=21.29 E-value=1.8e+02 Score=16.77 Aligned_cols=30 Identities=27% Similarity=0.369 Sum_probs=18.7
Q ss_pred cCCeEEEecCCcEEEecccCCeEEEccEEechHHHHHHHhh
Q psy4547 47 TGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQAIEVALRD 87 (92)
Q Consensus 47 tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~iE~~l~~ 87 (92)
.|--+.+|.++.+.+.|| +++..|++.|..
T Consensus 59 Lgt~~~id~~~~lii~G~-----------~~~~~i~~~L~~ 88 (125)
T PF01873_consen 59 LGTQGSIDGKGRLIINGR-----------FSSKQIQDLLDK 88 (125)
T ss_dssp SSSEEEEETTTEEEEESS-----------SSCCHHHHHHHH
T ss_pred HCCceEECCCCEEEEEEe-----------cCHHHHHHHHHH
Confidence 455566666666776665 455567776653
No 189
>PF13342 Toprim_Crpt: C-terminal repeat of topoisomerase
Probab=20.95 E-value=81 Score=15.73 Aligned_cols=17 Identities=18% Similarity=0.286 Sum_probs=14.8
Q ss_pred EccEEechHHHHHHHhh
Q psy4547 71 IRGYTIELQAIEVALRD 87 (92)
Q Consensus 71 ~~G~~v~~~~iE~~l~~ 87 (92)
+.|..++..+|+..|..
T Consensus 11 i~gk~lt~~~~~~Ll~~ 27 (62)
T PF13342_consen 11 IAGKKLTDEEVKELLEK 27 (62)
T ss_pred EcCCCCCHHHHHHHHHc
Confidence 68999999999998864
No 190
>PF01426 BAH: BAH domain; InterPro: IPR001025 The BAH (bromo-adjacent homology) family contains proteins such as eukaryotic DNA (cytosine-5) methyltransferases IPR001525 from INTERPRO, the origin recognition complex 1 (Orc1) proteins, as well as several proteins involved in transcriptional regulation. The BAH domain appears to act as a protein-protein interaction module specialised in gene silencing, as suggested for example by its interaction within yeast Orc1p with the silent information regulator Sir1p. The BAH module might therefore play an important role by linking DNA methylation, replication and transcriptional regulation [].; GO: 0003677 DNA binding; PDB: 4DA4_A 3PT6_B 3AV6_A 3AV5_A 3AV4_A 3PT9_A 3SWR_A 3PTA_A 1M4Z_A 1ZBX_A ....
Probab=20.93 E-value=1.3e+02 Score=16.17 Aligned_cols=21 Identities=29% Similarity=0.480 Sum_probs=12.7
Q ss_pred EEcCCeEEEecCC--cEEEeccc
Q psy4547 45 YNTGDWGYALGDG--TFEVIGRS 65 (92)
Q Consensus 45 ~~tGD~~~~~~~g--~l~~~gR~ 65 (92)
|+.||.+++..+. .-..++|.
T Consensus 3 ~~vGD~V~v~~~~~~~~~~v~~I 25 (119)
T PF01426_consen 3 YKVGDFVYVKPDDPPEPPYVARI 25 (119)
T ss_dssp EETTSEEEEECTSTTSEEEEEEE
T ss_pred EeCCCEEEEeCCCCCCCCEEEEE
Confidence 6778877776554 44444444
No 191
>PF01611 Filo_glycop: Filovirus glycoprotein; InterPro: IPR002561 This entry represents an extracellular domain from the envelope glycoprotein of Ebola virus sp. and Lake Victoria marburgvirus. The extracellular domain is also produced as a separate transcript that gives rise to a non-structural, secreted glycoprotein, which is produced in large amounts and has an unknown function []. Processing of the protein may be involved in viral pathogenicity [].; PDB: 3VE0_I 3CSY_O 3S88_I.
Probab=20.87 E-value=63 Score=21.91 Aligned_cols=29 Identities=28% Similarity=0.236 Sum_probs=19.5
Q ss_pred EcCCeEEEecCCcEEEecccCCeEEEccEE
Q psy4547 46 NTGDWGYALGDGTFEVIGRSDTMVKIRGYT 75 (92)
Q Consensus 46 ~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~ 75 (92)
+-||++ ++.+|-|++.+|....|..+|..
T Consensus 133 cpgg~A-fHk~GAFFLYDRlASTviYRG~t 161 (364)
T PF01611_consen 133 CPGGIA-FHKWGAFFLYDRLASTVIYRGTT 161 (364)
T ss_dssp --SSEE-EETTS-EEEESSEEESS--TT-E
T ss_pred CCCcce-eecccceeeecccceeeEeccee
Confidence 357777 57899999999999888888864
No 192
>TIGR03432 yjhG_yagF probable dehydratase, YjhG/YagF family. This homolog of dihydroxy-acid dehydratases has an odd, sparse distribution. Members are found in two Acidobacteria, two Planctomycetes, Bacillus clausii KSM-K16, and (in two copies each) in strains K12-MG1655 and W3110 of Escherichia coli. The local context is not well conserved, but a few members are adjacent to homologs of the gluconate:H+ symporter (see TIGR00791).
Probab=20.87 E-value=2.6e+02 Score=21.05 Aligned_cols=45 Identities=13% Similarity=0.020 Sum_probs=28.9
Q ss_pred eeEEEcCCeEEEecCCcEEEecccCCeEEEccEEechHHHHHHHhhC
Q psy4547 42 VRLYNTGDWGYALGDGTFEVIGRSDTMVKIRGYTIELQAIEVALRDY 88 (92)
Q Consensus 42 ~~~~~tGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~~~~iE~~l~~~ 88 (92)
..+.+.||+..+|-+.+ .+.|.. +++-.....++|+|.++.|.+-
T Consensus 552 IalVrdGD~I~IDi~~r-~l~g~~-~~~~~~~~~~~~~~~~~~l~~r 596 (640)
T TIGR03432 552 IGKVRDGDLIEIIIDRN-TLEGTV-NLVGTEDGNQLPEEGAAVLAAR 596 (640)
T ss_pred EEEEeCCCEEEEEcCCC-eEEEEE-EEEecccccCChHHHHHHHhcC
Confidence 35889999999986653 111111 1222355678999999998753
No 193
>PRK01973 septum formation inhibitor; Reviewed
Probab=20.76 E-value=2.6e+02 Score=18.54 Aligned_cols=31 Identities=16% Similarity=0.339 Sum_probs=21.1
Q ss_pred cceeEEEcCCeEEE---------ecCCcEEEecccCCeEE
Q psy4547 40 CGVRLYNTGDWGYA---------LGDGTFEVIGRSDTMVK 70 (92)
Q Consensus 40 ~~~~~~~tGD~~~~---------~~~g~l~~~gR~~~~i~ 70 (92)
.+...|..||+..+ -++|.+++.|+....+-
T Consensus 172 SGQ~i~a~gdliilg~V~~GAEviA~GnI~V~G~lrGra~ 211 (271)
T PRK01973 172 SGQQIYAKGDLVVLGPVSYGAEVIAEGNIHIYAPLRGRAL 211 (271)
T ss_pred CCCEEEeCCCEEEEccCCCCCEEEeCCCEEEEEEeccEEE
Confidence 34457777887665 45688998887765553
No 194
>COG2139 RPL21A Ribosomal protein L21E [Translation, ribosomal structure and biogenesis]
Probab=20.54 E-value=1.2e+02 Score=16.84 Aligned_cols=30 Identities=30% Similarity=0.388 Sum_probs=21.7
Q ss_pred EEcCCeEEEecCCcE-------EEecccCCeEEEccE
Q psy4547 45 YNTGDWGYALGDGTF-------EVIGRSDTMVKIRGY 74 (92)
Q Consensus 45 ~~tGD~~~~~~~g~l-------~~~gR~~~~i~~~G~ 74 (92)
|.-||.+.++-|..+ .|.|+...++...|.
T Consensus 33 y~~Gd~V~I~IdpSv~kGmPh~rf~G~TG~Vvg~~g~ 69 (98)
T COG2139 33 YKVGDKVHIDIDPSVHKGMPHPRFQGKTGTVVGVRGR 69 (98)
T ss_pred ccCCCEEEEEeCcccccCCCCccccCcceEEEeccCC
Confidence 788999999887543 477777766666553
No 195
>PF09926 DUF2158: Uncharacterized small protein (DUF2158); InterPro: IPR019226 This entry represents a family of predominantly prokaryotic proteins with no known function.
Probab=20.41 E-value=67 Score=15.55 Aligned_cols=14 Identities=21% Similarity=0.309 Sum_probs=10.6
Q ss_pred EEcCCeEEEecCCc
Q psy4547 45 YNTGDWGYALGDGT 58 (92)
Q Consensus 45 ~~tGD~~~~~~~g~ 58 (92)
|.+||.++.-..|.
T Consensus 1 f~~GDvV~LKSGGp 14 (53)
T PF09926_consen 1 FKIGDVVQLKSGGP 14 (53)
T ss_pred CCCCCEEEEccCCC
Confidence 46789998877765
No 196
>PF10079 DUF2317: Uncharacterized protein conserved in bacteria (DUF2317); InterPro: IPR011199 Members of this protein family include BshC, which is an enzyme required for bacillithiol biosynthesis and described as a cysteine-adding enzyme. Bacillithiol is a low-molecular-weight thiol, an analog of glutathione and mycothiol, and is found largely in the Firmicutes.
Probab=20.33 E-value=3.6e+02 Score=19.76 Aligned_cols=27 Identities=11% Similarity=0.105 Sum_probs=21.5
Q ss_pred ccCCeEEE--ccEEechHHHHHHHhhCCC
Q psy4547 64 RSDTMVKI--RGYTIELQAIEVALRDYPV 90 (92)
Q Consensus 64 R~~~~i~~--~G~~v~~~~iE~~l~~~~~ 90 (92)
|.++.+.+ .+...+..|+.+.+.++|.
T Consensus 299 ~~~~~F~~~~~~~~fs~~ELl~~l~~~Pe 327 (542)
T PF10079_consen 299 REGGQFVVRNGEIRFSEEELLEELESHPE 327 (542)
T ss_pred EeCCEEEECCCCeeeCHHHHHHHHHhChh
Confidence 66666644 6778999999999999884
No 197
>cd07970 OBF_DNA_ligase_LigC The Oligonucleotide/oligosaccharide binding (OB)-fold domain of ATP-dependent DNA ligase LigC is a DNA-binding module that is part of the catalytic core unit. ATP-dependent polynucleotide ligases catalyze phosphodiester bond formation using nicked nucleic acid substrates with the high energy nucleotide of ATP as a cofactor in a three step reaction mechanism. DNA ligases play a vital role in the diverse processes of DNA replication, recombination and repair. ATP-dependent ligases are present in many organisms such as viruses, bacteriohages, eukarya, archaea and bacteria. Bacterial DNA ligases are divided into two broad classes: NAD-dependent and ATP-dependent. All bacterial species have a NAD-dependent DNA ligase (LigA). Some bacterial genomes contain multiple genes for DNA ligases that are predicted to use ATP as their cofactor, including Mycobacterium tuberculosis LigB, LigC, and LigD. This group is composed of Mycobacterium tuberculosis LigC and similar ba
Probab=20.09 E-value=1.1e+02 Score=17.29 Aligned_cols=16 Identities=25% Similarity=0.472 Sum_probs=11.6
Q ss_pred eEEEecCCcEEEeccc
Q psy4547 50 WGYALGDGTFEVIGRS 65 (92)
Q Consensus 50 ~~~~~~~g~l~~~gR~ 65 (92)
+|.++++|.|.+.||.
T Consensus 22 Lg~~~~~g~l~yvG~v 37 (122)
T cd07970 22 LGLYDDGGRLRHVGRT 37 (122)
T ss_pred EEEECCCCCEEEEEEE
Confidence 3656667788888884
Done!