Query psy4562
Match_columns 112
No_of_seqs 161 out of 1127
Neff 6.3
Searched_HMMs 29240
Date Fri Aug 16 20:13:27 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4562.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/4562hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dwl_A Actin-related protein 3 99.9 4.6E-26 1.6E-30 184.1 0.3 92 19-111 292-424 (427)
2 3qb0_A Actin-related protein 4 99.9 1.2E-25 4.2E-30 185.3 -0.1 90 18-108 384-497 (498)
3 4fo0_A Actin-related protein 8 99.9 1.8E-24 6.1E-29 177.9 -0.3 91 20-111 472-592 (593)
4 2fxu_A Alpha-actin-1, actin, a 99.9 4.6E-23 1.6E-27 162.1 2.2 90 19-109 260-375 (375)
5 1k8k_A ARP3, actin-like protei 99.8 1.5E-22 5E-27 160.6 1.4 92 18-110 280-414 (418)
6 1k8k_B ARP2, actin-like protei 99.8 3.1E-22 1E-26 158.9 1.5 97 9-106 242-388 (394)
7 4am6_A Actin-like protein ARP8 99.5 8.5E-16 2.9E-20 130.0 0.3 52 59-111 600-654 (655)
8 1jce_A ROD shape-determining p 97.0 2E-05 7E-10 60.1 -4.2 56 32-87 262-330 (344)
9 1dkg_D Molecular chaperone DNA 95.7 0.0007 2.4E-08 52.2 -2.3 51 32-82 321-381 (383)
10 3h1q_A Ethanolamine utilizatio 94.9 0.0016 5.3E-08 47.8 -2.4 45 33-80 219-272 (272)
11 3qfu_A 78 kDa glucose-regulate 94.6 0.0013 4.3E-08 50.6 -3.8 50 33-82 332-392 (394)
12 2v7y_A Chaperone protein DNAK; 92.4 0.0056 1.9E-07 49.6 -3.6 49 33-81 291-349 (509)
13 3i33_A Heat shock-related 70 k 92.0 0.006 2.1E-07 47.2 -3.8 50 33-82 340-400 (404)
14 2kho_A Heat shock protein 70; 83.8 0.096 3.3E-06 43.4 -2.1 62 20-81 308-380 (605)
15 1yuw_A Heat shock cognate 71 k 79.0 0.15 5E-06 41.8 -2.6 36 46-81 334-378 (554)
16 3d2f_A Heat shock protein homo 68.5 0.37 1.3E-05 40.6 -2.7 36 46-81 338-381 (675)
17 4ehu_A Activator of 2-hydroxyi 65.4 0.39 1.3E-05 35.1 -2.8 36 46-81 210-253 (276)
18 4gni_A Putative heat shock pro 50.1 1.8 6.2E-05 33.2 -1.5 38 46-83 348-401 (409)
19 2zgy_A Plasmid segregation pro 41.8 1.8 6E-05 32.4 -2.8 34 46-79 276-318 (320)
20 2ych_A Competence protein PILM 35.9 5.7 0.00019 29.9 -0.7 10 46-55 310-319 (377)
21 4b9q_A Chaperone protein DNAK; 35.0 2.6 8.9E-05 34.7 -3.0 36 46-81 337-380 (605)
22 2jsh_A Appetite-regulating hor 31.3 9.5 0.00033 19.0 -0.1 15 88-102 8-22 (26)
23 4a2a_A Cell division protein F 27.7 14 0.00046 29.1 0.2 19 46-64 332-360 (419)
24 4apw_A ALP12; actin-like prote 27.0 10 0.00034 28.6 -0.7 43 38-80 274-322 (329)
25 2d0o_A DIOL dehydratase-reacti 21.4 37 0.0013 28.7 1.6 27 41-67 545-584 (610)
No 1
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.91 E-value=4.6e-26 Score=184.07 Aligned_cols=92 Identities=18% Similarity=0.331 Sum_probs=79.3
Q ss_pred cccCCCCCCcc------hh-hhchhcCCccCcCc----eEEecCCCCC---------------C---------------C
Q psy4562 19 FGHQPRSPLIN------YQ-KFKIRIEDPPRRKD----MVFIGGAVLA---------------E---------------K 57 (112)
Q Consensus 19 ~~f~p~~~gi~------~~-~~sI~~c~~d~r~~----IvL~GGss~~---------------~---------------~ 57 (112)
.+|+|+.+|++ +. .++|++||+|+|+. |||+||+||| + .
T Consensus 292 ~LF~P~~~g~~~~~gI~~~i~~sI~~c~~dlr~~L~~nIvLtGG~sl~~G~~~RL~~El~~l~~~~~~~~~~~~~~~p~~ 371 (427)
T 3dwl_A 292 IFFNPEIASSDFLTPLPELVDNVVQSSPIDVRKGLYKNIVLSGGSTLFKNFGNRLQRDLKRIVDERIHRSEMLSGAKSGG 371 (427)
T ss_dssp GGTCGGGTCSSCCSCHHHHHHHHHHTSCHHHHHHHHHCEEEESGGGCSTTTTHHHHHHHHHHHTTC-------------C
T ss_pred hccCchhcCCccCCCccHHHHHHHHhCCHHHHHHHhCCEEEEccCcCCCChHHHHHHHHHHhhhhhccccccccccCCCc
Confidence 37888655544 33 57999999999999 9999999998 1 2
Q ss_pred ceEEEecCCCCceeeeecceeeecccccccccceeHHHHhhcCchhhhhccCCC
Q psy4562 58 FKIRIEDPPRRKDMVFIGGAVLAEVMKDRDAFWMSNKEYQERGVSVLSKLGNRA 111 (112)
Q Consensus 58 ~~v~V~~~~~~~~~aW~Ggsila~~~~~f~~~~iTr~eYeE~G~~iv~~k~~~~ 111 (112)
++|+|.++++|+|++|+|||+||+++ +|+++||||+||+|+|++++|+++.|.
T Consensus 372 ~~vkv~~~~~r~~s~WiGGSilasl~-~f~~~witk~EYeE~G~~iv~~~~~~~ 424 (427)
T 3dwl_A 372 VDVNVISHKRQRNAVWFGGSLLAQTP-EFGSYCHTKADYEEYGASIARRYQIFG 424 (427)
T ss_dssp CCCCEECCTTCTTHHHHHHHHHHHST-THHHHSEEHHHHHHSCGGGGSCCCC--
T ss_pred eeEEEecCCccccceecCceeecccc-chhheeEEHHHHhhhChHhheeccccc
Confidence 46889999999999999999999987 799999999999999999999998764
No 2
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=99.90 E-value=1.2e-25 Score=185.27 Aligned_cols=90 Identities=24% Similarity=0.335 Sum_probs=78.8
Q ss_pred ccccCCCCCCcchh-hhchhcCCccCcCc----eEEecCCCCC---------------CCceEEEecC---CCCceeeee
Q psy4562 18 PFGHQPRSPLINYQ-KFKIRIEDPPRRKD----MVFIGGAVLA---------------EKFKIRIEDP---PRRKDMVFI 74 (112)
Q Consensus 18 p~~f~p~~~gi~~~-~~sI~~c~~d~r~~----IvL~GGss~~---------------~~~~v~V~~~---~~~~~~aW~ 74 (112)
+.....+..||++. .+||++||+|+|+. |||+||+||| +.++|+|.++ ++|.+++|+
T Consensus 384 ~~~~~~~~~Gi~e~i~~sI~~cd~d~r~~L~~nIvLsGGst~~pGf~~Rl~~El~~l~p~~~i~v~~~~~~~er~~s~Wi 463 (498)
T 3qb0_A 384 PPKENNELIGLADLVYSSIMSSDVDLRATLAHNVVLTGGTSSIPGLSDRLMTELNKILPSLKFRILTTGHTIERQYQSWL 463 (498)
T ss_dssp -----CCSCCHHHHHHHHHHTSCTTTHHHHHTTEEEESGGGGSTTHHHHHHHHHHHHSTTSCCCEECCSCTGGGGSHHHH
T ss_pred cccccccCCCchHHHHHHHHhCCHHHHHHHhcCEEEeCCccCchhHHHHHHHHHHHhCCCCeeEEEcCCCCCccCccEEc
Confidence 33344578899886 67999999999999 9999999999 4668999988 789999999
Q ss_pred cceeeecccccccccceeHHHHhhcCc-hhhhhcc
Q psy4562 75 GGAVLAEVMKDRDAFWMSNKEYQERGV-SVLSKLG 108 (112)
Q Consensus 75 Ggsila~~~~~f~~~~iTr~eYeE~G~-~iv~~k~ 108 (112)
|||+||+++ +|+++||||+||+|.|+ +++++||
T Consensus 464 Ggsilasl~-~f~~~witk~EY~E~G~~~iv~~kc 497 (498)
T 3qb0_A 464 GGSILTSLG-TFHQLWVGKKEYEEVGVERLLNDRF 497 (498)
T ss_dssp HHHHHHTCH-HHHHTSEEHHHHHTTCCHHHHHHTT
T ss_pred ccEEEecCc-chhceEEEHHHHhhhCcHhhccccC
Confidence 999999997 79999999999999999 9999998
No 3
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=99.88 E-value=1.8e-24 Score=177.90 Aligned_cols=91 Identities=19% Similarity=0.333 Sum_probs=79.6
Q ss_pred ccCCCCCCcchh-hhchhcCCc-cCcCc----eEEecCCCCCC---------------------CceEEEecCC---CCc
Q psy4562 20 GHQPRSPLINYQ-KFKIRIEDP-PRRKD----MVFIGGAVLAE---------------------KFKIRIEDPP---RRK 69 (112)
Q Consensus 20 ~f~p~~~gi~~~-~~sI~~c~~-d~r~~----IvL~GGss~~~---------------------~~~v~V~~~~---~~~ 69 (112)
.|+.+..||+.+ .+||++||. |+|+. |||+||+|+|+ ..+|+|++++ +|.
T Consensus 472 ~~~~~~~gL~~aI~~SI~~~~~~D~r~~L~~NIvltGG~s~~pGf~~RL~~eL~~~~p~~~~~~~~~v~v~~~p~~~d~~ 551 (593)
T 4fo0_A 472 LFEGKALGLDKAILHSIDCCSSDDTKKKMYSSILVVGGGLMFHKAQEFLQHRILNKMPPSFRRIIENVDVITRPKDMDPR 551 (593)
T ss_dssp HHHHSCCCHHHHHHHHHHTCSSHHHHHHHHHEEEEESSTTCCBTHHHHHHHHHHHHSCHHHHHHSSCCEEESSGGGCCTT
T ss_pred cccccCCCHHHHHHHHHHhCCcHHHHHHHhCCEEEEchhhchhcHHHHHHHHHHHhCcchhccccceEEEECCCCCCCCc
Confidence 345567789886 579999994 99998 99999999991 2358999887 799
Q ss_pred eeeeecceeeecccccccccceeHHHHhhcCchhhhhccCCC
Q psy4562 70 DMVFIGGAVLAEVMKDRDAFWMSNKEYQERGVSVLSKLGNRA 111 (112)
Q Consensus 70 ~~aW~Ggsila~~~~~f~~~~iTr~eYeE~G~~iv~~k~~~~ 111 (112)
+++|+|||+||++. .|+++||||+||+|+|+++|++||+|.
T Consensus 552 ~~aW~GgSilasL~-~f~~~wItk~EYeE~G~~il~~kc~f~ 592 (593)
T 4fo0_A 552 LIAWKGGAVLACLD-TTQELWIYQREWQRFGVRMLRERAAFV 592 (593)
T ss_dssp THHHHHHHHHHHCG-GGGGTCEEHHHHHHHTTHHHHHHCSSC
T ss_pred eeeehhhHHHhcCc-cHHHeeECHHHHHhhCcHHHhhcCCcC
Confidence 99999999999997 799999999999999999999999874
No 4
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=99.86 E-value=4.6e-23 Score=162.12 Aligned_cols=90 Identities=33% Similarity=0.474 Sum_probs=74.6
Q ss_pred cccCCCC-----CCcchh-hhchhcCCccCcCc----eEEecCCCCC----------------CCceEEEecCCCCceee
Q psy4562 19 FGHQPRS-----PLINYQ-KFKIRIEDPPRRKD----MVFIGGAVLA----------------EKFKIRIEDPPRRKDMV 72 (112)
Q Consensus 19 ~~f~p~~-----~gi~~~-~~sI~~c~~d~r~~----IvL~GGss~~----------------~~~~v~V~~~~~~~~~a 72 (112)
.+|+|+. .||.+. .++|++||+|+|+. |||+||+|++ ...+++|..+++|.+++
T Consensus 260 ~lf~p~~~~~~~~~i~~~i~~~i~~~~~~~~~~l~~~IvLtGG~s~~pG~~~rl~~el~~~~p~~~~v~v~~~~~p~~~~ 339 (375)
T 2fxu_A 260 TLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSV 339 (375)
T ss_dssp TTTCGGGGTCCSCCHHHHHHHHHHTSCHHHHHHHHTCEEEESGGGCSTTHHHHHHHHHHHHSCTTCCCCEECCTTTTSHH
T ss_pred hhCCCccCCCCCCCHHHHHHHHHHhCCHHHHHHHHhCcEeeCCCCCCccHHHHHHHHHHHhCCCCeeEEEEcCCCCCccE
Confidence 3677764 455543 57999999999987 9999999999 23458888999999999
Q ss_pred eecceeeecccccccccceeHHHHhhcCchhhhhccC
Q psy4562 73 FIGGAVLAEVMKDRDAFWMSNKEYQERGVSVLSKLGN 109 (112)
Q Consensus 73 W~Ggsila~~~~~f~~~~iTr~eYeE~G~~iv~~k~~ 109 (112)
|+||+++|++. .|+++||||+||+|+|++++++||+
T Consensus 340 w~G~si~a~l~-~f~~~~itk~ey~e~G~~~~~~k~~ 375 (375)
T 2fxu_A 340 WIGGSILASLS-TFQQMWITKQEYDEAGPSIVHRKCF 375 (375)
T ss_dssp HHHHHHHHHCG-GGGGGSEEHHHHHHHCGGGGC----
T ss_pred EcchHHhhCcc-cHhhceeeHHHHhhhChHHHhhhcc
Confidence 99999999987 7999999999999999999999985
No 5
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=99.84 E-value=1.5e-22 Score=160.61 Aligned_cols=92 Identities=18% Similarity=0.216 Sum_probs=78.9
Q ss_pred ccccCCCCCC------cchh-hhchhcCCccCcCc----eEEecCCCCCC------------------------------
Q psy4562 18 PFGHQPRSPL------INYQ-KFKIRIEDPPRRKD----MVFIGGAVLAE------------------------------ 56 (112)
Q Consensus 18 p~~f~p~~~g------i~~~-~~sI~~c~~d~r~~----IvL~GGss~~~------------------------------ 56 (112)
..+|+|+.+| |... .++|++||.|+|+. |||+||+|+++
T Consensus 280 E~lF~P~~~~~~~~~~i~~~i~~si~~~~~~~~~~l~~~IvL~GG~s~~pg~~~rl~~el~~~~~~~~~~~~~~~~~~~~ 359 (418)
T 1k8k_A 280 EIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGRLK 359 (418)
T ss_dssp HTTTCGGGTCTTCCCCHHHHHHHHHHHSCGGGTTHHHHCEEEESGGGCSTTHHHHHHHHHHHHHHHHHHHHHHHC----C
T ss_pred HhhCCCccCCCCCCCCHHHHHHHHHHcCCHHHHHHHHhceEEeCCccccccHHHHHHHHHHHhhccccccccccccccCC
Confidence 3578887654 4333 57999999999998 99999999981
Q ss_pred --CceEEEecCCCCceeeeecceeeecccccccccceeHHHHhhcCchhhhhccCC
Q psy4562 57 --KFKIRIEDPPRRKDMVFIGGAVLAEVMKDRDAFWMSNKEYQERGVSVLSKLGNR 110 (112)
Q Consensus 57 --~~~v~V~~~~~~~~~aW~Ggsila~~~~~f~~~~iTr~eYeE~G~~iv~~k~~~ 110 (112)
..+++|.++++|.+++|+|||++|++. .|+++||||+||+|+|++++++||.|
T Consensus 360 p~~~~v~v~~~~~~~~~~w~Ggsilasl~-~f~~~~itk~ey~e~G~~~~~~~~~f 414 (418)
T 1k8k_A 360 PKPIDVQVITHHMQRYAVWFGGSMLASTP-EFYQVCHTKKDYEEIGPSICRHNPVF 414 (418)
T ss_dssp CCCCCCCEECCTTCTTHHHHHHHHHTTSH-HHHHHSEEHHHHHHHCGGGGGCCCCC
T ss_pred CCceeEEEeCCCccccceeHhHHHHHcCc-cHhheEEEHHHHhhhCHHHHhhhccc
Confidence 135788999999999999999999987 79999999999999999999998765
No 6
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=99.84 E-value=3.1e-22 Score=158.87 Aligned_cols=97 Identities=46% Similarity=0.744 Sum_probs=38.5
Q ss_pred eeeecCCCCc------------cccCCCCCC-----cchh-hhchhcCCccCcCc----eEEecCCCCCC----------
Q psy4562 9 AVRVVPDRHP------------FGHQPRSPL-----INYQ-KFKIRIEDPPRRKD----MVFIGGAVLAE---------- 56 (112)
Q Consensus 9 ~~~~~~~~~p------------~~f~p~~~g-----i~~~-~~sI~~c~~d~r~~----IvL~GGss~~~---------- 56 (112)
..+.+||.+. .+|+|+.+| |.+. .++|++||+|+|+. |||+||+|+|+
T Consensus 242 ~~~~lpdg~~i~i~~erf~~~E~Lf~p~~~~~~~~~i~~~i~~~i~~~~~d~r~~l~~nIvLtGG~s~~~G~~~rl~~el 321 (394)
T 1k8k_B 242 ESYTLPDGRIIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLEREL 321 (394)
T ss_dssp EEEECTTSCEEEECTHHHHTGGGGTCGGGGTCCSCCHHHHHHHHHHHSCTTTHHHHHTTCEEESGGGCSTTHHHHHHHHH
T ss_pred eEEECCCCCEEEECchhhcChHhhCCchhccCCCCCHHHHHHHHHHhCCHHHHHHHHhCEEEeCcccccccHHHHHHHHH
Confidence 4567888542 468887554 4443 67999999999988 99999999991
Q ss_pred -----------------CceEEEecCCCCceeeeecceeeeccccccc-ccceeHHHHhhcCchhhhh
Q psy4562 57 -----------------KFKIRIEDPPRRKDMVFIGGAVLAEVMKDRD-AFWMSNKEYQERGVSVLSK 106 (112)
Q Consensus 57 -----------------~~~v~V~~~~~~~~~aW~Ggsila~~~~~f~-~~~iTr~eYeE~G~~iv~~ 106 (112)
.++++|.++++|.+++|+|||++|+++ .|+ ++||||+||+|+|++++++
T Consensus 322 ~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilasl~-~f~~~~~itk~eY~e~G~~~~~~ 388 (394)
T 1k8k_B 322 KQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLADIM-KDKDNFWMTRQEYQEKGVRVLEK 388 (394)
T ss_dssp HHHHHHHTCSSCCCTTCCCCC-----------------------------------------------
T ss_pred HHHHhhhhcccccCCCCceEEEEecCCCcceeEEhhhHHhhCCc-CCccceeecHHHHhhhCHHHHHh
Confidence 126888889999999999999999987 799 9999999999999999988
No 7
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=99.52 E-value=8.5e-16 Score=130.00 Aligned_cols=52 Identities=21% Similarity=0.413 Sum_probs=48.3
Q ss_pred eEEEecCCCC---ceeeeecceeeecccccccccceeHHHHhhcCchhhhhccCCC
Q psy4562 59 KIRIEDPPRR---KDMVFIGGAVLAEVMKDRDAFWMSNKEYQERGVSVLSKLGNRA 111 (112)
Q Consensus 59 ~v~V~~~~~~---~~~aW~Ggsila~~~~~f~~~~iTr~eYeE~G~~iv~~k~~~~ 111 (112)
+|+|.+++++ ++++|+|||+||++. .|+++||||+||+|.|++++++||+|.
T Consensus 600 ~i~V~~~p~~~d~~~~~W~GgSvla~l~-~f~e~wIt~~Eyde~G~~il~~k~~f~ 654 (655)
T 4am6_A 600 PVSIIPPPRDMNPALIIWKGASVLAQIK-LVEELFITNSDWDVHGSRILQYKCIFT 654 (655)
T ss_dssp CCCEECCCTTSCGGGHHHHHHHHHTTSH-HHHHHCEEHHHHHHHGGGGGGTSCSSC
T ss_pred eeEEeCCccccCcceeEEecceeeeecc-cHhheeecHHHHhhhcchheEeccccC
Confidence 3789999987 899999999999997 799999999999999999999999875
No 8
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=96.98 E-value=2e-05 Score=60.14 Aligned_cols=56 Identities=13% Similarity=0.172 Sum_probs=40.7
Q ss_pred hhchhcCCccCcC----c-eEEecCCCCCC--------CceEEEecCCCCceeeeecceeeeccccccc
Q psy4562 32 KFKIRIEDPPRRK----D-MVFIGGAVLAE--------KFKIRIEDPPRRKDMVFIGGAVLAEVMKDRD 87 (112)
Q Consensus 32 ~~sI~~c~~d~r~----~-IvL~GGss~~~--------~~~v~V~~~~~~~~~aW~Ggsila~~~~~f~ 87 (112)
..+|.+|+.+.++ . |+|+||+|+++ .+..+|..+.+|.+++|+|+++++...+.|+
T Consensus 262 ~~~l~~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~~~~~v~~~~~p~~ava~Gaa~~a~~~~~~~ 330 (344)
T 1jce_A 262 RTTLEKTPPELVSDIIERGIFLTGGGSLLRGLDTLLQKETGISVIRSEEPLTAVAKGAGMVLDKVNILK 330 (344)
T ss_dssp HHHHHTSCHHHHHHHHHHCEEEESGGGCSBTHHHHHHHHHSSCEEECSSTTTHHHHHHHHGGGCHHHHT
T ss_pred HHHHHhCCchhccchhhCcEEEECccccchHHHHHHHHHHCCCccccCChHHHHHHHHHHHHhChHHHH
Confidence 4578888876542 2 99999999983 2234455677889999999999987422454
No 9
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=95.69 E-value=0.0007 Score=52.17 Aligned_cols=51 Identities=24% Similarity=0.304 Sum_probs=36.2
Q ss_pred hhchhcCCccCcC-c-eEEecCCCCC--------CCceEEEecCCCCceeeeecceeeecc
Q psy4562 32 KFKIRIEDPPRRK-D-MVFIGGAVLA--------EKFKIRIEDPPRRKDMVFIGGAVLAEV 82 (112)
Q Consensus 32 ~~sI~~c~~d~r~-~-IvL~GGss~~--------~~~~v~V~~~~~~~~~aW~Ggsila~~ 82 (112)
..+|.+|+..... . |+|+||+|++ +.+...+..+.+|.+++|+|++++|.+
T Consensus 321 ~~~l~~~~~~~~~i~~IvL~GG~s~~p~l~~~l~~~~~~~v~~~~~p~~ava~Gaa~~a~~ 381 (383)
T 1dkg_D 321 KVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGV 381 (383)
T ss_dssp HHHHHTTTCCTTTCCEEEEESGGGGSHHHHHHHHHHHSSCCBCSSCTTTHHHHHHHHHTTT
T ss_pred HHHHHHcCCCHhhCCEEEEecCccccHHHHHHHHHHhCCCCCCCcChHHHHHHHHHHHHHh
Confidence 3567777643211 2 9999999998 223345667788999999999998763
No 10
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=94.94 E-value=0.0016 Score=47.82 Aligned_cols=45 Identities=16% Similarity=0.146 Sum_probs=33.0
Q ss_pred hchhcCC-ccCcCceEEecCCCCCC--------CceEEEecCCCCceeeeecceeee
Q psy4562 33 FKIRIED-PPRRKDMVFIGGAVLAE--------KFKIRIEDPPRRKDMVFIGGAVLA 80 (112)
Q Consensus 33 ~sI~~c~-~d~r~~IvL~GGss~~~--------~~~v~V~~~~~~~~~aW~Ggsila 80 (112)
..+.+++ ++ .|+|+||+++++ .+.+.|..+.++.+++++|++++|
T Consensus 219 ~~l~~~~~~~---~ivL~GG~a~~~~l~~~l~~~l~~~v~~~~~p~~a~a~Gaal~a 272 (272)
T 3h1q_A 219 EVIKNYDQTL---PVYVVGGTAYLTGFSEEFSRFLGKEVQVPIHPLLVTPLGIALFG 272 (272)
T ss_dssp HHTTTSCSSC---CEEEESGGGGSTTHHHHHHHHHSSCCBCCSSGGGHHHHHHHTTC
T ss_pred HHHHhcCCCC---EEEEECCccchhhHHHHHHHHhCCCccccCChHHHHHHHHHhcC
Confidence 4556665 21 399999999983 334566778889999999998754
No 11
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=94.63 E-value=0.0013 Score=50.64 Aligned_cols=50 Identities=20% Similarity=0.250 Sum_probs=35.9
Q ss_pred hchhcCCccCcCc--eEEecCCCCC--------CCc-eEEEecCCCCceeeeecceeeecc
Q psy4562 33 FKIRIEDPPRRKD--MVFIGGAVLA--------EKF-KIRIEDPPRRKDMVFIGGAVLAEV 82 (112)
Q Consensus 33 ~sI~~c~~d~r~~--IvL~GGss~~--------~~~-~v~V~~~~~~~~~aW~Ggsila~~ 82 (112)
..|..++.+...- |+|+||+|++ +.+ ..+|..+.+|..++++|++++|.+
T Consensus 332 ~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~ 392 (394)
T 3qfu_A 332 KVLQDSGLEKKDVDDIVLVGGSTRIPKVQQLLESYFDGKKASKGINPDEAVAYGAAVQAGV 392 (394)
T ss_dssp HHHHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHH
T ss_pred HHHHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHHHh
Confidence 4566665542221 9999999998 233 456677778899999999988753
No 12
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=92.45 E-value=0.0056 Score=49.56 Aligned_cols=49 Identities=14% Similarity=0.240 Sum_probs=34.1
Q ss_pred hchhcCCccCcC-c-eEEecCCCCCC--------CceEEEecCCCCceeeeecceeeec
Q psy4562 33 FKIRIEDPPRRK-D-MVFIGGAVLAE--------KFKIRIEDPPRRKDMVFIGGAVLAE 81 (112)
Q Consensus 33 ~sI~~c~~d~r~-~-IvL~GGss~~~--------~~~v~V~~~~~~~~~aW~Ggsila~ 81 (112)
.+|..++.+... . |+|+||+|.++ .+...+..+.+|..++|+|++++|.
T Consensus 291 ~~L~~a~~~~~~i~~VvLvGG~s~~p~v~~~l~~~f~~~~~~~~~p~~aVa~Gaa~~a~ 349 (509)
T 2v7y_A 291 QALQDAGLTPADIDKVILVGGSTRIPAVQEAIKRELGKEPHKGVNPDEVVAIGAAIQGG 349 (509)
T ss_dssp HHHHHHTCCGGGCSEEEEESGGGGCHHHHHHHHHHHSSCCBCCSCTTTHHHHHHHHHHH
T ss_pred HHHHHcCCChhHCcEEEEECCcccChHHHHHHHHHhCCCcCcCCCchhhhHhhHHHHHH
Confidence 456666533111 1 99999999982 2233455677889999999999885
No 13
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=92.00 E-value=0.006 Score=47.19 Aligned_cols=50 Identities=20% Similarity=0.294 Sum_probs=34.6
Q ss_pred hchhcCCccCcCc--eEEecCCCCC--------CCc-eEEEecCCCCceeeeecceeeecc
Q psy4562 33 FKIRIEDPPRRKD--MVFIGGAVLA--------EKF-KIRIEDPPRRKDMVFIGGAVLAEV 82 (112)
Q Consensus 33 ~sI~~c~~d~r~~--IvL~GGss~~--------~~~-~v~V~~~~~~~~~aW~Ggsila~~ 82 (112)
..|..+..+...- |+|+||+|.+ +.+ ..+|..+.+|..++++|++++|.+
T Consensus 340 ~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~ 400 (404)
T 3i33_A 340 KALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAI 400 (404)
T ss_dssp HHHHHHTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCSSCTTTHHHHHHHHHHHH
T ss_pred HHHHHcCCCHhhCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHHHH
Confidence 4555554432222 9999999998 223 345667778899999999988753
No 14
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=83.75 E-value=0.096 Score=43.38 Aligned_cols=62 Identities=16% Similarity=0.107 Sum_probs=37.5
Q ss_pred ccCCCCCCcchh-hhchhcCCccCcC-c-eEEecCCCCCC--------CceEEEecCCCCceeeeecceeeec
Q psy4562 20 GHQPRSPLINYQ-KFKIRIEDPPRRK-D-MVFIGGAVLAE--------KFKIRIEDPPRRKDMVFIGGAVLAE 81 (112)
Q Consensus 20 ~f~p~~~gi~~~-~~sI~~c~~d~r~-~-IvL~GGss~~~--------~~~v~V~~~~~~~~~aW~Ggsila~ 81 (112)
++.|-.-.+-.. ..+|..+...... . |+|+||+|.++ .+...+....+|..+++.|+++.|.
T Consensus 308 l~~~~~~~i~~~i~~~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~fg~~~~~~~npd~aVA~GAa~~a~ 380 (605)
T 2kho_A 308 LVEDLVNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGG 380 (605)
T ss_dssp TCCSTTGGGTSHHHHHHHTTTCCTTTCSEEEEESGGGGSHHHHHHHHHHHSSCCBCSSCTTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHcCCChhhCceEEEECCcccChHHHHHHHHhcCCCcCcCCCcchHHHHHHHHHHH
Confidence 344443333222 3455555432111 2 99999999982 2223455667788999999998875
No 15
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=78.97 E-value=0.15 Score=41.77 Aligned_cols=36 Identities=25% Similarity=0.378 Sum_probs=27.6
Q ss_pred eEEecCCCCCC--------Cc-eEEEecCCCCceeeeecceeeec
Q psy4562 46 MVFIGGAVLAE--------KF-KIRIEDPPRRKDMVFIGGAVLAE 81 (112)
Q Consensus 46 IvL~GGss~~~--------~~-~v~V~~~~~~~~~aW~Ggsila~ 81 (112)
|+|+||+|.++ .+ ...+..+.+|..+++.|+++.|.
T Consensus 334 VvLvGG~srip~v~~~l~~~f~~~~v~~~~np~~aVA~Gaa~~a~ 378 (554)
T 1yuw_A 334 IVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAA 378 (554)
T ss_dssp EEEESGGGGCHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHH
T ss_pred EEEECCcccChHHHHHHHHHcCCCccccCCCchhHHHHHHHHHHH
Confidence 99999999981 12 13455667888999999999875
No 16
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=68.52 E-value=0.37 Score=40.55 Aligned_cols=36 Identities=17% Similarity=0.318 Sum_probs=27.1
Q ss_pred eEEecCCCCCC--------CceEEEecCCCCceeeeecceeeec
Q psy4562 46 MVFIGGAVLAE--------KFKIRIEDPPRRKDMVFIGGAVLAE 81 (112)
Q Consensus 46 IvL~GGss~~~--------~~~v~V~~~~~~~~~aW~Ggsila~ 81 (112)
|+|+||+|.++ .+...+..+.+|..++.+|+++.|.
T Consensus 338 VvLvGGssriP~v~~~l~~~fg~~~~~~~nPdeaVA~GAa~~a~ 381 (675)
T 3d2f_A 338 VEIIGGTTRIPTLKQSISEAFGKPLSTTLNQDEAIAKGAAFICA 381 (675)
T ss_dssp EEEESGGGGSHHHHHHHHHHHTSCEECCSCTTTHHHHHHHHHHH
T ss_pred EEEECCCccChHHHHHHHHhcCCCccccCCcchHHHHHHHHHHH
Confidence 99999999982 2223455667788899999988764
No 17
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=65.44 E-value=0.39 Score=35.09 Aligned_cols=36 Identities=22% Similarity=0.277 Sum_probs=27.7
Q ss_pred eEEecCCCCC--------CCceEEEecCCCCceeeeecceeeec
Q psy4562 46 MVFIGGAVLA--------EKFKIRIEDPPRRKDMVFIGGAVLAE 81 (112)
Q Consensus 46 IvL~GGss~~--------~~~~v~V~~~~~~~~~aW~Ggsila~ 81 (112)
|||+||.+.. +.+..++..|+++.+..=+|++++|.
T Consensus 210 vvl~GGva~n~~lr~~l~~~~g~~~~~p~~p~~~~A~GAAl~A~ 253 (276)
T 4ehu_A 210 VVMVGGVARNSGIVRAMAREINTEIIVPDIPQLTGALGAALYAF 253 (276)
T ss_dssp EEEESGGGGCHHHHHHHHHHHTSCEECCSSGGGHHHHHHHHHHH
T ss_pred EEEecCccchHHHHHHHHHHHCCCeeeCCCcchHHHHHHHHHHH
Confidence 9999999987 33446677888887775588888874
No 18
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=50.08 E-value=1.8 Score=33.22 Aligned_cols=38 Identities=18% Similarity=0.278 Sum_probs=26.9
Q ss_pred eEEecCCCCCC----------CceEEE------ecCCCCceeeeecceeeeccc
Q psy4562 46 MVFIGGAVLAE----------KFKIRI------EDPPRRKDMVFIGGAVLAEVM 83 (112)
Q Consensus 46 IvL~GGss~~~----------~~~v~V------~~~~~~~~~aW~Ggsila~~~ 83 (112)
|+|+||+|.++ ..+++| ....++..++=.|+++.+...
T Consensus 348 V~LvGG~s~~p~v~~~l~~~f~~~~~v~~P~~~~~~~~p~~ava~GAa~~~~~~ 401 (409)
T 4gni_A 348 VIMSGGTSNTPRIAANFRYIFPESTRILAPSTDPSALNPSELQARGAALQASLI 401 (409)
T ss_dssp EEEESGGGGCHHHHHHHHHHSCTTSEEESTTTCTTCCCTTTHHHHHHHHHHHHH
T ss_pred EEEECCccccHHHHHHHHHHcCCccccccccccCCCcCHHHHHHHHHHHHhhhh
Confidence 99999999981 223456 344567777778999888644
No 19
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=41.77 E-value=1.8 Score=32.42 Aligned_cols=34 Identities=18% Similarity=0.238 Sum_probs=21.7
Q ss_pred eEEecCCCCC------CCceE---EEecCCCCceeeeecceee
Q psy4562 46 MVFIGGAVLA------EKFKI---RIEDPPRRKDMVFIGGAVL 79 (112)
Q Consensus 46 IvL~GGss~~------~~~~v---~V~~~~~~~~~aW~Ggsil 79 (112)
|||+||.+.+ ..+.. ++..+.+|.++.=+|+.++
T Consensus 276 vvl~GGga~ll~~~l~~~~~~~~~~~~~~~~P~~a~A~G~~~~ 318 (320)
T 2zgy_A 276 VMVIGGGAELICDAVKKHTQIRDERFFKTNNSQYDLVNGMYLI 318 (320)
T ss_dssp EEEESTTHHHHHHHHHHTSCCCGGGEECCSCGGGHHHHHHHHH
T ss_pred EEEECChHHHHHHHHHHHhCCCCCceeeCCCcHHHHHHHHHHh
Confidence 9999999986 22333 3555666777665565443
No 20
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=35.90 E-value=5.7 Score=29.93 Aligned_cols=10 Identities=20% Similarity=0.321 Sum_probs=9.7
Q ss_pred eEEecCCCCC
Q psy4562 46 MVFIGGAVLA 55 (112)
Q Consensus 46 IvL~GGss~~ 55 (112)
|+|+||++++
T Consensus 310 IvL~GG~s~~ 319 (377)
T 2ych_A 310 GYLLGGGSKL 319 (377)
T ss_dssp EEEESGGGGS
T ss_pred EEEECccccc
Confidence 9999999998
No 21
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=34.96 E-value=2.6 Score=34.74 Aligned_cols=36 Identities=22% Similarity=0.317 Sum_probs=22.0
Q ss_pred eEEecCCCCCC--------CceEEEecCCCCceeeeecceeeec
Q psy4562 46 MVFIGGAVLAE--------KFKIRIEDPPRRKDMVFIGGAVLAE 81 (112)
Q Consensus 46 IvL~GGss~~~--------~~~v~V~~~~~~~~~aW~Ggsila~ 81 (112)
|+|+||+|.++ .+...+....+|..++=.|+++.|.
T Consensus 337 VvLvGG~sriP~v~~~l~~~fg~~~~~~~nPdeaVA~GAai~a~ 380 (605)
T 4b9q_A 337 VILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGG 380 (605)
T ss_dssp EEEESGGGGSHHHHHHHHHHHTSCCCSSSCTTTHHHHHHHHHHH
T ss_pred EEEeCCccCchHHHHHHHHHhccCcCCCcChhHHHHHhHHHHHH
Confidence 99999999981 1122333444555555567776653
No 22
>2jsh_A Appetite-regulating hormone, obestatin; micellar solution, DPC, SDS, alternative splicing, amidation, lipoprotein, secreted; NMR {Synthetic} PDB: 2jsj_A
Probab=31.31 E-value=9.5 Score=19.03 Aligned_cols=15 Identities=27% Similarity=0.517 Sum_probs=12.0
Q ss_pred ccceeHHHHhhcCch
Q psy4562 88 AFWMSNKEYQERGVS 102 (112)
Q Consensus 88 ~~~iTr~eYeE~G~~ 102 (112)
...+|-++|+|+|.-
T Consensus 8 Gi~ls~~~y~~yG~~ 22 (26)
T 2jsh_A 8 GIKLSGAQYQQHGRA 22 (26)
T ss_dssp TGGGHHHHCSCSSSC
T ss_pred eeEecHHHHHHHhHH
Confidence 456789999999963
No 23
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=27.72 E-value=14 Score=29.10 Aligned_cols=19 Identities=26% Similarity=0.349 Sum_probs=14.7
Q ss_pred eEEecCCCCCC----------CceEEEec
Q psy4562 46 MVFIGGAVLAE----------KFKIRIED 64 (112)
Q Consensus 46 IvL~GGss~~~----------~~~v~V~~ 64 (112)
|||+||+|+++ ..++++..
T Consensus 332 IvLtGG~s~lpgl~e~~~~~~g~~vri~~ 360 (419)
T 4a2a_A 332 VVLTGGGAKIPRINELATEVFKSPVRTGC 360 (419)
T ss_dssp EEEESGGGGSTTHHHHHHHHHTSCEEECC
T ss_pred EEEECchhchhhHHHHHHHHHCCCeEEEe
Confidence 99999999982 34567666
No 24
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=26.99 E-value=10 Score=28.64 Aligned_cols=43 Identities=14% Similarity=0.092 Sum_probs=24.9
Q ss_pred CCccCcCceEEecCCCCC------CCceEEEecCCCCceeeeecceeee
Q psy4562 38 EDPPRRKDMVFIGGAVLA------EKFKIRIEDPPRRKDMVFIGGAVLA 80 (112)
Q Consensus 38 c~~d~r~~IvL~GGss~~------~~~~v~V~~~~~~~~~aW~Ggsila 80 (112)
+|++.-..|+|+||.+++ ..+.+++..+++|.++.=+|.-.++
T Consensus 274 ~~~~~~~~IvltGGGA~l~~~~l~~~~~~~v~v~~~P~~a~a~G~~~~~ 322 (329)
T 4apw_A 274 FKLDQLDSLIFIGGTTQKLKEQISKTYPNNSIITNNSQWTTCEGLYKVA 322 (329)
T ss_dssp CCTTSCSEEEEESTTHHHHHHHHHHHSTTCEECCSSGGGHHHHHHHHHH
T ss_pred CCHHHccEEEEECChHHHHHHHHHHHcCCCCEecCCChhhHHHHHHHHH
Confidence 555532239999999997 2223234455666666545544433
No 25
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=21.42 E-value=37 Score=28.66 Aligned_cols=27 Identities=19% Similarity=0.342 Sum_probs=20.3
Q ss_pred cCcCc--eEEecCCCCC-----------CCceEEEecCCC
Q psy4562 41 PRRKD--MVFIGGAVLA-----------EKFKIRIEDPPR 67 (112)
Q Consensus 41 d~r~~--IvL~GGss~~-----------~~~~v~V~~~~~ 67 (112)
++|.- |||+||++++ ..+.|++-.|..
T Consensus 545 ~~r~i~~VVLTGGsSql~GI~ElA~~iL~~y~VRiGrP~~ 584 (610)
T 2d0o_A 545 NIRDIPFVVLVGGSSLDFEVPQLVTDALAHYRLVAGRGNI 584 (610)
T ss_dssp CGGGCCEEEEESGGGGCSSHHHHHHHHTTTSSCEEEECCG
T ss_pred cccccCCEEEeCchhhcccHHHHHHHHhCcCCeEEecCCc
Confidence 45555 9999999998 455788877754
Done!