BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4565
(67 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P45888|ARP2_DROME Actin-related protein 2 OS=Drosophila melanogaster GN=Arp14D PE=2
SV=2
Length = 394
Score = 71.6 bits (174), Expect = 1e-12, Method: Composition-based stats.
Identities = 34/43 (79%), Positives = 37/43 (86%), Gaps = 1/43 (2%)
Query: 24 SLVITFSGDGVTHICPVYEQFALPHLTRRLDIAGESHITRYLL 66
S V+ SGDGVTHICPVYE+FALPHLTRRLDIAG ITRYL+
Sbjct: 153 SGVVIDSGDGVTHICPVYEEFALPHLTRRLDIAGRD-ITRYLI 194
>sp|Q5R4K0|ARP2_PONAB Actin-related protein 2 OS=Pongo abelii GN=ACTR2 PE=2 SV=1
Length = 394
Score = 69.7 bits (169), Expect = 5e-12, Method: Composition-based stats.
Identities = 32/41 (78%), Positives = 35/41 (85%), Gaps = 1/41 (2%)
Query: 26 VITFSGDGVTHICPVYEQFALPHLTRRLDIAGESHITRYLL 66
V+ SGDGVTHICPVYE F+LPHLTRRLDIAG ITRYL+
Sbjct: 155 VVVDSGDGVTHICPVYEDFSLPHLTRRLDIAGRD-ITRYLI 194
>sp|Q56A35|ARP2B_DANRE Actin-related protein 2-B OS=Danio rerio GN=actr2b PE=2 SV=1
Length = 394
Score = 69.3 bits (168), Expect = 7e-12, Method: Composition-based stats.
Identities = 32/41 (78%), Positives = 35/41 (85%), Gaps = 1/41 (2%)
Query: 26 VITFSGDGVTHICPVYEQFALPHLTRRLDIAGESHITRYLL 66
V+ SGDGVTHICPVYE F+LPHLTRRLDIAG ITRYL+
Sbjct: 155 VVVDSGDGVTHICPVYEGFSLPHLTRRLDIAGRD-ITRYLI 194
>sp|Q7SXW6|ARP2A_DANRE Actin-related protein 2-A OS=Danio rerio GN=actr2a PE=2 SV=1
Length = 394
Score = 69.3 bits (168), Expect = 7e-12, Method: Composition-based stats.
Identities = 32/41 (78%), Positives = 35/41 (85%), Gaps = 1/41 (2%)
Query: 26 VITFSGDGVTHICPVYEQFALPHLTRRLDIAGESHITRYLL 66
V+ SGDGVTHICPVYE F+LPHLTRRLDIAG ITRYL+
Sbjct: 155 VVVDSGDGVTHICPVYEGFSLPHLTRRLDIAGRD-ITRYLI 194
>sp|P61161|ARP2_MOUSE Actin-related protein 2 OS=Mus musculus GN=Actr2 PE=1 SV=1
Length = 394
Score = 69.3 bits (168), Expect = 7e-12, Method: Composition-based stats.
Identities = 32/41 (78%), Positives = 35/41 (85%), Gaps = 1/41 (2%)
Query: 26 VITFSGDGVTHICPVYEQFALPHLTRRLDIAGESHITRYLL 66
V+ SGDGVTHICPVYE F+LPHLTRRLDIAG ITRYL+
Sbjct: 155 VVVDSGDGVTHICPVYEGFSLPHLTRRLDIAGRD-ITRYLI 194
>sp|P61160|ARP2_HUMAN Actin-related protein 2 OS=Homo sapiens GN=ACTR2 PE=1 SV=1
Length = 394
Score = 69.3 bits (168), Expect = 7e-12, Method: Composition-based stats.
Identities = 32/41 (78%), Positives = 35/41 (85%), Gaps = 1/41 (2%)
Query: 26 VITFSGDGVTHICPVYEQFALPHLTRRLDIAGESHITRYLL 66
V+ SGDGVTHICPVYE F+LPHLTRRLDIAG ITRYL+
Sbjct: 155 VVVDSGDGVTHICPVYEGFSLPHLTRRLDIAGRD-ITRYLI 194
>sp|A7MB62|ARP2_BOVIN Actin-related protein 2 OS=Bos taurus GN=ACTR2 PE=1 SV=1
Length = 394
Score = 69.3 bits (168), Expect = 7e-12, Method: Composition-based stats.
Identities = 32/41 (78%), Positives = 35/41 (85%), Gaps = 1/41 (2%)
Query: 26 VITFSGDGVTHICPVYEQFALPHLTRRLDIAGESHITRYLL 66
V+ SGDGVTHICPVYE F+LPHLTRRLDIAG ITRYL+
Sbjct: 155 VVVDSGDGVTHICPVYEGFSLPHLTRRLDIAGRD-ITRYLI 194
>sp|P53488|ARP2_CHICK Actin-related protein 2 OS=Gallus gallus GN=ACTR2 PE=2 SV=1
Length = 394
Score = 68.9 bits (167), Expect = 8e-12, Method: Composition-based stats.
Identities = 32/41 (78%), Positives = 35/41 (85%), Gaps = 1/41 (2%)
Query: 26 VITFSGDGVTHICPVYEQFALPHLTRRLDIAGESHITRYLL 66
V+ SGDGVTHICPVYE F+LPHLTRRLDIAG ITRYL+
Sbjct: 155 VVVDSGDGVTHICPVYEGFSLPHLTRRLDIAGRD-ITRYLI 194
>sp|Q7ZXV3|ARP2B_XENLA Actin-related protein 2-B OS=Xenopus laevis GN=actr2-b PE=2 SV=1
Length = 394
Score = 68.9 bits (167), Expect = 8e-12, Method: Composition-based stats.
Identities = 32/41 (78%), Positives = 35/41 (85%), Gaps = 1/41 (2%)
Query: 26 VITFSGDGVTHICPVYEQFALPHLTRRLDIAGESHITRYLL 66
V+ SGDGVTHICPVYE F+LPHLTRRLDIAG ITRYL+
Sbjct: 155 VVVDSGDGVTHICPVYEGFSLPHLTRRLDIAGRD-ITRYLI 194
>sp|Q7ZTP2|ARP2A_XENLA Actin-related protein 2-A OS=Xenopus laevis GN=actr2-a PE=2 SV=1
Length = 394
Score = 68.9 bits (167), Expect = 8e-12, Method: Composition-based stats.
Identities = 32/41 (78%), Positives = 35/41 (85%), Gaps = 1/41 (2%)
Query: 26 VITFSGDGVTHICPVYEQFALPHLTRRLDIAGESHITRYLL 66
V+ SGDGVTHICPVYE F+LPHLTRRLDIAG ITRYL+
Sbjct: 155 VVVDSGDGVTHICPVYEGFSLPHLTRRLDIAGRD-ITRYLI 194
>sp|Q5M7U6|ARP2_RAT Actin-related protein 2 OS=Rattus norvegicus GN=Actr2 PE=1 SV=1
Length = 394
Score = 68.9 bits (167), Expect = 8e-12, Method: Composition-based stats.
Identities = 32/41 (78%), Positives = 35/41 (85%), Gaps = 1/41 (2%)
Query: 26 VITFSGDGVTHICPVYEQFALPHLTRRLDIAGESHITRYLL 66
V+ SGDGVTHICPVYE F+LPHLTRRLDIAG ITRYL+
Sbjct: 155 VVVDSGDGVTHICPVYEGFSLPHLTRRLDIAGRD-ITRYLI 194
>sp|Q5BL41|ARP2_XENTR Actin-related protein 2 OS=Xenopus tropicalis GN=actr2 PE=2 SV=1
Length = 394
Score = 68.9 bits (167), Expect = 9e-12, Method: Composition-based stats.
Identities = 32/41 (78%), Positives = 35/41 (85%), Gaps = 1/41 (2%)
Query: 26 VITFSGDGVTHICPVYEQFALPHLTRRLDIAGESHITRYLL 66
V+ SGDGVTHICPVYE F+LPHLTRRLDIAG ITRYL+
Sbjct: 155 VVVDSGDGVTHICPVYEGFSLPHLTRRLDIAGRD-ITRYLI 194
>sp|Q61JZ2|ARP2_CAEBR Actin-related protein 2 OS=Caenorhabditis briggsae GN=arx-2 PE=3
SV=1
Length = 393
Score = 65.1 bits (157), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/41 (75%), Positives = 34/41 (82%), Gaps = 1/41 (2%)
Query: 26 VITFSGDGVTHICPVYEQFALPHLTRRLDIAGESHITRYLL 66
V+ SGDGVTHICPVYE FAL HLTRRLDIAG IT+YL+
Sbjct: 153 VVVDSGDGVTHICPVYEGFALHHLTRRLDIAGRD-ITKYLI 192
>sp|P53489|ARP2_CAEEL Actin-related protein 2 OS=Caenorhabditis elegans GN=arx-2 PE=3
SV=1
Length = 395
Score = 65.1 bits (157), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/41 (75%), Positives = 34/41 (82%), Gaps = 1/41 (2%)
Query: 26 VITFSGDGVTHICPVYEQFALPHLTRRLDIAGESHITRYLL 66
V+ SGDGVTHICPVYE FAL HLTRRLDIAG IT+YL+
Sbjct: 155 VVVDSGDGVTHICPVYEGFALHHLTRRLDIAGRD-ITKYLI 194
>sp|P53487|ARP2_ACACA Actin-related protein 2 OS=Acanthamoeba castellanii GN=arp2 PE=2
SV=1
Length = 388
Score = 62.4 bits (150), Expect = 7e-10, Method: Composition-based stats.
Identities = 28/41 (68%), Positives = 34/41 (82%), Gaps = 1/41 (2%)
Query: 26 VITFSGDGVTHICPVYEQFALPHLTRRLDIAGESHITRYLL 66
V+ SGDGVTHI PVYE F+LPHLTRRL++AG +TRYL+
Sbjct: 153 VVVDSGDGVTHIVPVYEGFSLPHLTRRLNVAGRD-VTRYLI 192
>sp|O96621|ARP2_DICDI Actin-related protein 2 OS=Dictyostelium discoideum GN=arpB PE=1
SV=1
Length = 392
Score = 61.6 bits (148), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/41 (65%), Positives = 34/41 (82%), Gaps = 1/41 (2%)
Query: 26 VITFSGDGVTHICPVYEQFALPHLTRRLDIAGESHITRYLL 66
V+ SGDGVTHI PVYE +++PHLTRRLD+AG +TRYL+
Sbjct: 153 VVVDSGDGVTHIIPVYEGYSIPHLTRRLDVAGRD-VTRYLI 192
>sp|P32381|ARP2_YEAST Actin-related protein 2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=ARP2 PE=1 SV=1
Length = 391
Score = 56.2 bits (134), Expect = 6e-08, Method: Composition-based stats.
Identities = 29/56 (51%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 11 VQTYVAYGTDYKPSLVITFSGDGVTHICPVYEQFALPHLTRRLDIAGESHITRYLL 66
+Q +A S V+ SGDGVTHI PVYE L HLTRRLD+AG +TR+L+
Sbjct: 139 IQAVLALYAQGLSSGVVVDSGDGVTHIVPVYESVVLSHLTRRLDVAGRD-VTRHLI 193
>sp|P45889|ACTZ_DROME Actin-like protein 87C OS=Drosophila melanogaster GN=Arp87C PE=2
SV=2
Length = 376
Score = 52.8 bits (125), Expect = 7e-07, Method: Composition-based stats.
Identities = 24/40 (60%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Query: 26 VITFSGDGVTHICPVYEQFALPHLTRRLDIAGESHITRYL 65
V+ SGDGVTH P+YE FA+PH R+DIAG +TRYL
Sbjct: 156 VVLDSGDGVTHAVPIYEGFAMPHSIMRVDIAGRD-VTRYL 194
>sp|Q9UUJ1|ARP2_SCHPO Actin-related protein 2 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=arp2 PE=1 SV=1
Length = 390
Score = 52.8 bits (125), Expect = 7e-07, Method: Composition-based stats.
Identities = 27/44 (61%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 24 SLVITFSGDGVTHICPVYEQFALPHLTRRLDIAGESHITRYLLS 67
S V+ SGDGVTHI PVYE L HL RLD+AG TRYL+S
Sbjct: 149 SGVVVDSGDGVTHIVPVYESVVLNHLVGRLDVAGRD-ATRYLIS 191
>sp|Q54I79|ACTY_DICDI Centractin OS=Dictyostelium discoideum GN=arpA PE=1 SV=1
Length = 383
Score = 52.4 bits (124), Expect = 9e-07, Method: Composition-based stats.
Identities = 24/40 (60%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Query: 26 VITFSGDGVTHICPVYEQFALPHLTRRLDIAGESHITRYL 65
++ SGDGVTH+ PV+E FALPH R+DIAG IT YL
Sbjct: 155 IVLDSGDGVTHVVPVFEGFALPHAISRIDIAGRD-ITEYL 193
>sp|P53455|ACT_AJECG Actin OS=Ajellomyces capsulata (strain G186AR / H82 / ATCC MYA-2454
/ RMSCC 2432) GN=HCBG_08711 PE=2 SV=2
Length = 375
Score = 52.0 bits (123), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/41 (53%), Positives = 30/41 (73%), Gaps = 1/41 (2%)
Query: 26 VITFSGDGVTHICPVYEQFALPHLTRRLDIAGESHITRYLL 66
++ SGDGVTH+ P+YE FALPH R+D+AG +T YL+
Sbjct: 151 IVLDSGDGVTHVVPIYEGFALPHAISRIDMAGRD-LTNYLM 190
>sp|A4IFE3|ACTY_BOVIN Beta-centractin OS=Bos taurus GN=ACTR1B PE=2 SV=1
Length = 376
Score = 52.0 bits (123), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/40 (60%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Query: 26 VITFSGDGVTHICPVYEQFALPHLTRRLDIAGESHITRYL 65
V+ SGDGVTH PVYE FA+PH R+DIAG ++RYL
Sbjct: 156 VVLDSGDGVTHAVPVYEGFAMPHSIMRVDIAGRD-VSRYL 194
>sp|Q9LSD6|ARP2_ARATH Actin-related protein 2 OS=Arabidopsis thaliana GN=ARP2 PE=1 SV=1
Length = 389
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/37 (56%), Positives = 30/37 (81%), Gaps = 1/37 (2%)
Query: 30 SGDGVTHICPVYEQFALPHLTRRLDIAGESHITRYLL 66
SGDGVTH+ PV + ++ PHLT+R+++AG HIT YL+
Sbjct: 156 SGDGVTHVVPVVDGYSFPHLTKRMNVAGR-HITAYLV 191
>sp|Q8R5C5|ACTY_MOUSE Beta-centractin OS=Mus musculus GN=Actr1b PE=1 SV=1
Length = 376
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/40 (57%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Query: 26 VITFSGDGVTHICPVYEQFALPHLTRRLDIAGESHITRYL 65
V+ SGDGVTH P+YE FA+PH R+DIAG ++RYL
Sbjct: 156 VVLDSGDGVTHAVPIYEGFAMPHSIMRVDIAGRD-VSRYL 194
>sp|P42025|ACTY_HUMAN Beta-centractin OS=Homo sapiens GN=ACTR1B PE=1 SV=1
Length = 376
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/40 (57%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Query: 26 VITFSGDGVTHICPVYEQFALPHLTRRLDIAGESHITRYL 65
V+ SGDGVTH P+YE FA+PH R+DIAG ++RYL
Sbjct: 156 VVLDSGDGVTHAVPIYEGFAMPHSIMRVDIAGRD-VSRYL 194
>sp|Q562R1|ACTBL_HUMAN Beta-actin-like protein 2 OS=Homo sapiens GN=ACTBL2 PE=1 SV=2
Length = 376
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/41 (56%), Positives = 30/41 (73%), Gaps = 1/41 (2%)
Query: 26 VITFSGDGVTHICPVYEQFALPHLTRRLDIAGESHITRYLL 66
++ SGDGVTHI P+YE +ALPH RLD+AG +T YL+
Sbjct: 152 IVMDSGDGVTHIVPIYEGYALPHAILRLDLAGRD-LTDYLM 191
>sp|Q8X119|ACT_EXODE Actin OS=Exophiala dermatitidis PE=3 SV=1
Length = 375
Score = 50.8 bits (120), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/41 (53%), Positives = 30/41 (73%), Gaps = 1/41 (2%)
Query: 26 VITFSGDGVTHICPVYEQFALPHLTRRLDIAGESHITRYLL 66
++ SGDGVTH+ P+YE FALPH R+D+AG +T YL+
Sbjct: 151 IVLDSGDGVTHVVPIYEGFALPHAISRVDMAGRD-LTDYLM 190
>sp|P20359|ACTG_EMENI Actin, gamma OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 /
CBS 112.46 / NRRL 194 / M139) GN=acnA PE=3 SV=2
Length = 375
Score = 50.8 bits (120), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/41 (53%), Positives = 30/41 (73%), Gaps = 1/41 (2%)
Query: 26 VITFSGDGVTHICPVYEQFALPHLTRRLDIAGESHITRYLL 66
++ SGDGVTH+ P+YE FALPH R+D+AG +T YL+
Sbjct: 151 IVLDSGDGVTHVVPIYEGFALPHAISRVDMAGRD-LTDYLM 190
>sp|P53477|ACT_TRYCR Actin OS=Trypanosoma cruzi PE=3 SV=1
Length = 376
Score = 50.8 bits (120), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 11 VQTYVAYGTDYKPSLVITFSGDGVTHICPVYEQFALPHLTRRLDIAGESHITRYLL 66
+Q ++ + + + ++ +GDGVTH P+YE ++LPH RR+D+AG +T YL+
Sbjct: 137 IQAVLSLYSSGRTTGIVLDAGDGVTHTVPIYEGYSLPHAIRRMDMAGRD-LTEYLM 191
>sp|P45520|ACT_LEIMA Actin OS=Leishmania major PE=3 SV=1
Length = 376
Score = 50.8 bits (120), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 11 VQTYVAYGTDYKPSLVITFSGDGVTHICPVYEQFALPHLTRRLDIAGESHITRYLL 66
+Q ++ + + + ++ +GDGVTH P+YE ++LPH RR+D+AG +T YL+
Sbjct: 137 IQAVLSLYSSGRTTGIVLDAGDGVTHTVPIYEGYSLPHAVRRVDMAGRD-LTEYLM 191
>sp|P42023|ACTZ_PNECA Actin-2 OS=Pneumocystis carinii PE=2 SV=1
Length = 385
Score = 50.8 bits (120), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/40 (57%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Query: 26 VITFSGDGVTHICPVYEQFALPHLTRRLDIAGESHITRYL 65
V+ SGDGVTH P+YE FA+P RR+DIAG +T YL
Sbjct: 155 VVLDSGDGVTHAVPIYEGFAMPSAIRRIDIAGRD-VTEYL 193
>sp|P78711|ACT_NEUCR Actin OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS
708.71 / DSM 1257 / FGSC 987) GN=act-1 PE=3 SV=2
Length = 375
Score = 50.8 bits (120), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/41 (53%), Positives = 30/41 (73%), Gaps = 1/41 (2%)
Query: 26 VITFSGDGVTHICPVYEQFALPHLTRRLDIAGESHITRYLL 66
++ SGDGVTH+ P+YE FALPH R+D+AG +T YL+
Sbjct: 151 IVLDSGDGVTHVVPIYEGFALPHAIARVDMAGRD-LTDYLM 190
>sp|Q6TCF2|ACT_GAEGA Actin OS=Gaeumannomyces graminis var. avenae GN=ACT PE=2 SV=1
Length = 375
Score = 50.8 bits (120), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/41 (53%), Positives = 30/41 (73%), Gaps = 1/41 (2%)
Query: 26 VITFSGDGVTHICPVYEQFALPHLTRRLDIAGESHITRYLL 66
++ SGDGVTH+ P+YE FALPH R+D+AG +T YL+
Sbjct: 151 IVLDSGDGVTHVVPIYEGFALPHAIARVDMAGRD-LTDYLM 190
>sp|Q9UVW9|ACTG_ACRCH Actin, gamma OS=Acremonium chrysogenum GN=ACT PE=3 SV=1
Length = 375
Score = 50.8 bits (120), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/41 (53%), Positives = 30/41 (73%), Gaps = 1/41 (2%)
Query: 26 VITFSGDGVTHICPVYEQFALPHLTRRLDIAGESHITRYLL 66
++ SGDGVTH+ P+YE FALPH R+D+AG +T YL+
Sbjct: 151 IVLDSGDGVTHVVPIYEGFALPHAIARVDMAGRD-LTDYLM 190
>sp|P0CG39|POTEJ_HUMAN POTE ankyrin domain family member J OS=Homo sapiens GN=POTEJ PE=3
SV=1
Length = 1038
Score = 50.4 bits (119), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 11 VQTYVAYGTDYKPSLVITFSGDGVTHICPVYEQFALPHLTRRLDIAGESHITRYLL 66
+Q ++ T + + ++ SGDGVTH P+Y+ ALPH T RLD+AG +T YL+
Sbjct: 799 IQAMLSLYTSGRTTGIVMDSGDGVTHTVPIYDGNALPHATLRLDLAGR-ELTDYLM 853
>sp|P0CG38|POTEI_HUMAN POTE ankyrin domain family member I OS=Homo sapiens GN=POTEI PE=2
SV=1
Length = 1075
Score = 50.4 bits (119), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 11 VQTYVAYGTDYKPSLVITFSGDGVTHICPVYEQFALPHLTRRLDIAGESHITRYLL 66
+Q ++ T + + ++ SGDGVTH P+Y+ ALPH T RLD+AG +T YL+
Sbjct: 836 IQAMLSLYTSGRTTGIVMDSGDGVTHTVPIYDGNALPHATLRLDLAGR-ELTDYLM 890
>sp|P45521|ACT_PROCL Actin (Fragment) OS=Procambarus clarkii PE=1 SV=1
Length = 322
Score = 50.4 bits (119), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/37 (62%), Positives = 28/37 (75%), Gaps = 1/37 (2%)
Query: 30 SGDGVTHICPVYEQFALPHLTRRLDIAGESHITRYLL 66
SGDGV+H+ PVYE FALPH RLD+AG +T YL+
Sbjct: 102 SGDGVSHMVPVYEGFALPHAILRLDLAGRD-LTNYLM 137
>sp|Q9Y896|ACT2_SCHCO Actin-2 OS=Schizophyllum commune GN=ACT2 PE=3 SV=1
Length = 375
Score = 50.4 bits (119), Expect = 3e-06, Method: Composition-based stats.
Identities = 21/41 (51%), Positives = 28/41 (68%)
Query: 26 VITFSGDGVTHICPVYEQFALPHLTRRLDIAGESHITRYLL 66
++ SGDGVTH P+YE F+LPH +RLD+AG R +L
Sbjct: 151 IVLDSGDGVTHTVPIYEGFSLPHAIQRLDLAGRDLTERLVL 191
>sp|P12433|ACT2_TRYBB Actin B OS=Trypanosoma brucei brucei PE=3 SV=1
Length = 376
Score = 50.4 bits (119), Expect = 4e-06, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 11 VQTYVAYGTDYKPSLVITFSGDGVTHICPVYEQFALPHLTRRLDIAGESHITRYLL 66
+Q ++ + + + ++ +GDGVTH P+YE ++LPH RR+D+AG +T YL+
Sbjct: 137 IQAVLSLYSSGRTTGIVLDAGDGVTHTVPIYEGYSLPHAIRRVDMAGRD-LTEYLM 191
>sp|P12432|ACT1_TRYBB Actin A OS=Trypanosoma brucei brucei PE=3 SV=1
Length = 376
Score = 50.4 bits (119), Expect = 4e-06, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 11 VQTYVAYGTDYKPSLVITFSGDGVTHICPVYEQFALPHLTRRLDIAGESHITRYLL 66
+Q ++ + + + ++ +GDGVTH P+YE ++LPH RR+D+AG +T YL+
Sbjct: 137 IQAVLSLYSSGRTTGIVLDAGDGVTHTVPIYEGYSLPHAIRRVDMAGRD-LTEYLM 191
>sp|P85515|ACTZ_RAT Alpha-centractin OS=Rattus norvegicus GN=Actr1a PE=1 SV=1
Length = 376
Score = 50.1 bits (118), Expect = 4e-06, Method: Composition-based stats.
Identities = 22/40 (55%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Query: 26 VITFSGDGVTHICPVYEQFALPHLTRRLDIAGESHITRYL 65
V+ SGDGVTH P+YE FA+PH R+DIAG ++R+L
Sbjct: 156 VVLDSGDGVTHAVPIYEGFAMPHSIMRIDIAGRD-VSRFL 194
>sp|P61164|ACTZ_MOUSE Alpha-centractin OS=Mus musculus GN=Actr1a PE=2 SV=1
Length = 376
Score = 50.1 bits (118), Expect = 4e-06, Method: Composition-based stats.
Identities = 22/40 (55%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Query: 26 VITFSGDGVTHICPVYEQFALPHLTRRLDIAGESHITRYL 65
V+ SGDGVTH P+YE FA+PH R+DIAG ++R+L
Sbjct: 156 VVLDSGDGVTHAVPIYEGFAMPHSIMRIDIAGRD-VSRFL 194
>sp|Q4R6J9|ACTZ_MACFA Alpha-centractin OS=Macaca fascicularis GN=ACTR1A PE=2 SV=1
Length = 376
Score = 50.1 bits (118), Expect = 4e-06, Method: Composition-based stats.
Identities = 22/40 (55%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Query: 26 VITFSGDGVTHICPVYEQFALPHLTRRLDIAGESHITRYL 65
V+ SGDGVTH P+YE FA+PH R+DIAG ++R+L
Sbjct: 156 VVLDSGDGVTHAVPIYEGFAMPHSIMRIDIAGRD-VSRFL 194
>sp|P61163|ACTZ_HUMAN Alpha-centractin OS=Homo sapiens GN=ACTR1A PE=1 SV=1
Length = 376
Score = 50.1 bits (118), Expect = 4e-06, Method: Composition-based stats.
Identities = 22/40 (55%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Query: 26 VITFSGDGVTHICPVYEQFALPHLTRRLDIAGESHITRYL 65
V+ SGDGVTH P+YE FA+PH R+DIAG ++R+L
Sbjct: 156 VVLDSGDGVTHAVPIYEGFAMPHSIMRIDIAGRD-VSRFL 194
>sp|P61162|ACTZ_CANFA Alpha-centractin OS=Canis familiaris GN=ACTR1A PE=2 SV=1
Length = 376
Score = 50.1 bits (118), Expect = 4e-06, Method: Composition-based stats.
Identities = 22/40 (55%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Query: 26 VITFSGDGVTHICPVYEQFALPHLTRRLDIAGESHITRYL 65
V+ SGDGVTH P+YE FA+PH R+DIAG ++R+L
Sbjct: 156 VVLDSGDGVTHAVPIYEGFAMPHSIMRIDIAGRD-VSRFL 194
>sp|Q9URS0|ACTG_PENCH Actin, gamma OS=Penicillium chrysogenum GN=ACT PE=3 SV=1
Length = 375
Score = 49.7 bits (117), Expect = 5e-06, Method: Composition-based stats.
Identities = 21/41 (51%), Positives = 30/41 (73%), Gaps = 1/41 (2%)
Query: 26 VITFSGDGVTHICPVYEQFALPHLTRRLDIAGESHITRYLL 66
++ SGDGVTH+ P+YE F+LPH R+D+AG +T YL+
Sbjct: 151 IVLDSGDGVTHVVPIYEGFSLPHAISRVDMAGRD-LTDYLM 190
>sp|Q99023|ACT_HYPJE Actin OS=Hypocrea jecorina GN=act PE=3 SV=1
Length = 376
Score = 49.7 bits (117), Expect = 5e-06, Method: Composition-based stats.
Identities = 22/41 (53%), Positives = 30/41 (73%), Gaps = 1/41 (2%)
Query: 26 VITFSGDGVTHICPVYEQFALPHLTRRLDIAGESHITRYLL 66
++ SGDGVT + P+YE FALPH RR+D+AG +T YL+
Sbjct: 151 IVLDSGDGVTTVVPIYEGFALPHAIRRVDMAGRD-LTDYLM 190
>sp|A2YUL5|ARP2_ORYSI Actin-related protein 2 OS=Oryza sativa subsp. indica GN=ARP2 PE=2
SV=2
Length = 389
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 30/38 (78%), Gaps = 1/38 (2%)
Query: 30 SGDGVTHICPVYEQFALPHLTRRLDIAGESHITRYLLS 67
SGDGVTH+ PV + F+ PH+T+R+++AG HIT YL+
Sbjct: 156 SGDGVTHVVPVVDGFSYPHITKRMNVAGR-HITSYLVD 192
>sp|Q6Z256|ARP2_ORYSJ Actin-related protein 2 OS=Oryza sativa subsp. japonica GN=ARP2
PE=3 SV=1
Length = 389
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 30/38 (78%), Gaps = 1/38 (2%)
Query: 30 SGDGVTHICPVYEQFALPHLTRRLDIAGESHITRYLLS 67
SGDGVTH+ PV + F+ PH+T+R+++AG HIT YL+
Sbjct: 156 SGDGVTHVVPVVDGFSYPHITKRMNVAGR-HITSYLVD 192
>sp|P10989|ACT_SCHPO Actin OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=act1 PE=1 SV=1
Length = 375
Score = 49.7 bits (117), Expect = 5e-06, Method: Composition-based stats.
Identities = 22/41 (53%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 26 VITFSGDGVTHICPVYEQFALPHLTRRLDIAGESHITRYLL 66
++ SGDGVTH P+YE +ALPH RLD+AG +T YL+
Sbjct: 151 IVLDSGDGVTHTVPIYEGYALPHAIMRLDLAGRD-LTDYLM 190
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.141 0.430
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,388,248
Number of Sequences: 539616
Number of extensions: 884764
Number of successful extensions: 1855
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 423
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1432
Number of HSP's gapped (non-prelim): 429
length of query: 67
length of database: 191,569,459
effective HSP length: 39
effective length of query: 28
effective length of database: 170,524,435
effective search space: 4774684180
effective search space used: 4774684180
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.8 bits)