BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4569
(88 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6DGZ1|B9D2_DANRE B9 domain-containing protein 2 OS=Danio rerio GN=b9d2 PE=2 SV=1
Length = 175
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 46/55 (83%)
Query: 34 DEFTRQFLGGGPQLKSPDLVYTGLDRYRLHTEAMGCVHLELSIILRNFDKYGIEA 88
D+ + F+GGGPQL+SPDL+Y+G DRYRLHT MG V LEL IILR+FD+YG+E+
Sbjct: 121 DQLSEMFVGGGPQLRSPDLIYSGADRYRLHTVGMGTVELELCIILRHFDRYGVES 175
>sp|Q6GN70|B9D2_XENLA B9 domain-containing protein 2 OS=Xenopus laevis GN=b9d2 PE=2 SV=1
Length = 176
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 45/55 (81%)
Query: 34 DEFTRQFLGGGPQLKSPDLVYTGLDRYRLHTEAMGCVHLELSIILRNFDKYGIEA 88
++ + F+GGGPQLKS L+Y G DRYRL T AMG VHLEL++ILRNF++YG+E+
Sbjct: 121 EQICQMFVGGGPQLKSASLIYGGSDRYRLQTVAMGQVHLELTVILRNFERYGVES 175
>sp|Q9BPU9|B9D2_HUMAN B9 domain-containing protein 2 OS=Homo sapiens GN=B9D2 PE=1 SV=2
Length = 175
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 49/74 (66%), Gaps = 5/74 (6%)
Query: 15 QLKSPDLVYTGLDRYRGMHDEFTRQFLGGGPQLKSPDLVYTGLDRYRLHTEAMGCVHLEL 74
QL P + L +R ++ R F+GGGPQL D +Y+G DRYRLHT A G VHLE+
Sbjct: 107 QLACP--TWRPLGSWR---EQLARAFVGGGPQLLHGDTIYSGADRYRLHTAAGGTVHLEI 161
Query: 75 SIILRNFDKYGIEA 88
++LRNFD+YG+E
Sbjct: 162 GLLLRNFDRYGVEC 175
>sp|Q56JY9|B9D2_BOVIN B9 domain-containing protein 2 OS=Bos taurus GN=B9D2 PE=2 SV=1
Length = 175
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 51/77 (66%), Gaps = 5/77 (6%)
Query: 12 GGPQLKSPDLVYTGLDRYRGMHDEFTRQFLGGGPQLKSPDLVYTGLDRYRLHTEAMGCVH 71
G QL P + L +R ++ R F+GGGPQL D +Y+G DRYRLHT + G VH
Sbjct: 104 GTHQLDCP--TWRPLGSWR---EQLARAFVGGGPQLLHGDAIYSGADRYRLHTTSGGTVH 158
Query: 72 LELSIILRNFDKYGIEA 88
LELS++LR+FD+YG+E
Sbjct: 159 LELSLLLRHFDRYGVEC 175
>sp|P0C5J3|B9D2_RAT B9 domain-containing protein 2 OS=Rattus norvegicus GN=B9d2 PE=2
SV=1
Length = 175
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 48/74 (64%), Gaps = 5/74 (6%)
Query: 15 QLKSPDLVYTGLDRYRGMHDEFTRQFLGGGPQLKSPDLVYTGLDRYRLHTEAMGCVHLEL 74
QL P + L +R ++ R F+GGGPQL D +Y+G DRYRLHT A G VHL +
Sbjct: 107 QLDCP--TWRPLGSWR---EQLARAFVGGGPQLLHADTIYSGADRYRLHTAAGGTVHLGI 161
Query: 75 SIILRNFDKYGIEA 88
++LR+FD+YG+E
Sbjct: 162 GLLLRHFDRYGVEC 175
>sp|Q3UK10|B9D2_MOUSE B9 domain-containing protein 2 OS=Mus musculus GN=B9d2 PE=1 SV=2
Length = 175
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 48/74 (64%), Gaps = 5/74 (6%)
Query: 15 QLKSPDLVYTGLDRYRGMHDEFTRQFLGGGPQLKSPDLVYTGLDRYRLHTEAMGCVHLEL 74
QL P + L +R ++ R F+GGGPQL D +Y+G DRYRLHT A G VHL +
Sbjct: 107 QLDCP--TWRPLGSWR---EQLARAFVGGGPQLLHADTIYSGADRYRLHTAAGGTVHLGI 161
Query: 75 SIILRNFDKYGIEA 88
++LR+FD+YG+E
Sbjct: 162 GLLLRHFDRYGVEC 175
>sp|Q5BJ61|B9D1_XENTR B9 domain-containing protein 1 OS=Xenopus tropicalis GN=b9d1 PE=2
SV=1
Length = 198
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 24/50 (48%)
Query: 36 FTRQFLGGGPQLKSPDLVYTGLDRYRLHTEAMGCVHLELSIILRNFDKYG 85
FT F+G P+ P +V G R + GCV + +++ ++ K G
Sbjct: 132 FTSWFMGRRPEFTDPKVVAQGEGREVTRVRSQGCVTVSFNVVTKDLKKLG 181
>sp|Q6DFD7|B9D1_XENLA B9 domain-containing protein 1 OS=Xenopus laevis GN=b9d1 PE=2 SV=1
Length = 198
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 24/50 (48%)
Query: 36 FTRQFLGGGPQLKSPDLVYTGLDRYRLHTEAMGCVHLELSIILRNFDKYG 85
FT F+G P+ P +V G R + GCV + +++ ++ K G
Sbjct: 132 FTSWFMGRRPEFTDPKVVAQGEGREVTRVRSQGCVTVSFNVVTKDLKKLG 181
>sp|Q12563|MNS1B_ASPSA Mannosyl-oligosaccharide alpha-1,2-mannosidase 1B OS=Aspergillus
saitoi GN=mns1B PE=2 SV=1
Length = 513
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 20/43 (46%)
Query: 9 FLGGGPQLKSPDLVYTGLDRYRGMHDEFTRQFLGGGPQLKSPD 51
FL GG L D + GLD G HD + G GP+ S D
Sbjct: 340 FLLGGTVLNRTDFINFGLDLVSGCHDTYNSTLTGIGPESFSWD 382
>sp|A2QAS2|MNS1B_ASPNC Probable mannosyl-oligosaccharide alpha-1,2-mannosidase 1B
OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513)
GN=mns1B PE=3 SV=1
Length = 513
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 20/43 (46%)
Query: 9 FLGGGPQLKSPDLVYTGLDRYRGMHDEFTRQFLGGGPQLKSPD 51
FL GG L D + GLD G HD + G GP+ S D
Sbjct: 340 FLLGGTVLNRTDFINFGLDLVSGCHDTYNSTLTGIGPESFSWD 382
>sp|Q2ULB2|MNS1B_ASPOR Mannosyl-oligosaccharide alpha-1,2-mannosidase 1B OS=Aspergillus
oryzae (strain ATCC 42149 / RIB 40) GN=mns1B PE=1 SV=1
Length = 510
Score = 31.6 bits (70), Expect = 1.5, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 9 FLGGGPQLKSPDLVYTGLDRYRGMHDEFTRQFLGGGPQ 46
FL GG L D + GLD +G H+ + + G GP+
Sbjct: 338 FLLGGTVLDRDDFIQFGLDLVKGCHETYNQTLTGIGPE 375
>sp|B8N417|MNS1B_ASPFN Probable mannosyl-oligosaccharide alpha-1,2-mannosidase 1B
OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 /
NRRL 3357 / JCM 12722 / SRRC 167) GN=mns1B PE=3 SV=2
Length = 510
Score = 31.6 bits (70), Expect = 1.5, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 9 FLGGGPQLKSPDLVYTGLDRYRGMHDEFTRQFLGGGPQ 46
FL GG L D + GLD +G H+ + + G GP+
Sbjct: 338 FLLGGTVLDRDDFIQFGLDLVKGCHETYNQTLTGIGPE 375
>sp|Q9UBV7|B4GT7_HUMAN Beta-1,4-galactosyltransferase 7 OS=Homo sapiens GN=B4GALT7 PE=1
SV=1
Length = 327
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 20/37 (54%)
Query: 3 DEFTRQFLGGGPQLKSPDLVYTGLDRYRGMHDEFTRQ 39
DEF R+ G G QL P + TG +R +HD R+
Sbjct: 229 DEFYRRIKGAGLQLFRPSGITTGYKTFRHLHDPAWRK 265
>sp|Q8R087|B4GT7_MOUSE Beta-1,4-galactosyltransferase 7 OS=Mus musculus GN=B4galt7 PE=2
SV=1
Length = 327
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 20/37 (54%)
Query: 3 DEFTRQFLGGGPQLKSPDLVYTGLDRYRGMHDEFTRQ 39
DEF R+ G G QL P + TG +R +HD R+
Sbjct: 229 DEFYRRIKGAGLQLFRPSGITTGYQTFRHLHDPAWRK 265
>sp|Q0D076|MNS1B_ASPTN Probable mannosyl-oligosaccharide alpha-1,2-mannosidase 1B
OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156)
GN=mns1B PE=3 SV=1
Length = 508
Score = 30.4 bits (67), Expect = 3.8, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 9 FLGGGPQLKSPDLVYTGLDRYRGMHDEFTRQFLGGGPQ 46
FL GG L + D + GLD +G H+ + G GP+
Sbjct: 337 FLLGGTVLDNDDYIKFGLDLVKGCHETYNATLTGIGPE 374
>sp|B7VSC8|PEPT_VIBSL Peptidase T OS=Vibrio splendidus (strain LGP32) GN=pepT PE=3 SV=1
Length = 410
Score = 30.0 bits (66), Expect = 4.5, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Query: 39 QFLGGGPQLKSPDLV--YTGLDRYRLHTEAMGCVHLELSIILRNFDKYGIEA 88
QF P ++P+ Y G Y L + MG EL I+R+F++ G+EA
Sbjct: 241 QFQLMMPAQETPECTEGYEGF--YHLKSAEMGVARSELGYIIRDFEREGVEA 290
>sp|Q5BF93|MNS1B_EMENI Mannosyl-oligosaccharide alpha-1,2-mannosidase 1B OS=Emericella
nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 /
NRRL 194 / M139) GN=mns1B PE=2 SV=2
Length = 505
Score = 29.6 bits (65), Expect = 6.4, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 20/43 (46%)
Query: 9 FLGGGPQLKSPDLVYTGLDRYRGMHDEFTRQFLGGGPQLKSPD 51
FL GG L D V GLD G H+ + G GP+ S D
Sbjct: 331 FLLGGTLLDRQDFVDFGLDLVAGCHETYNSTLTGIGPEQFSWD 373
>sp|P57895|SYD_PASMU Aspartate--tRNA ligase OS=Pasteurella multocida (strain Pm70)
GN=aspS PE=3 SV=1
Length = 588
Score = 29.3 bits (64), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 11/81 (13%)
Query: 3 DEFTRQFLG-----GGPQLKSPDLVYTGLDRYRGMHDEFTRQFLGGG----PQLKSPDLV 53
DE+T QF+G G LK DL G+D + +F + + Q ++ D++
Sbjct: 336 DEYT-QFVGIYGAKGLAWLKVNDLA-AGMDGVQSPIAKFLSEAVLKALLERVQAQNGDIL 393
Query: 54 YTGLDRYRLHTEAMGCVHLEL 74
+ G D Y++ T+AMG + L+L
Sbjct: 394 FFGADNYKVTTDAMGALRLKL 414
>sp|B1JLL5|SYD_YERPY Aspartate--tRNA ligase OS=Yersinia pseudotuberculosis serotype O:3
(strain YPIII) GN=aspS PE=3 SV=1
Length = 598
Score = 28.9 bits (63), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 21/29 (72%)
Query: 46 QLKSPDLVYTGLDRYRLHTEAMGCVHLEL 74
Q +S D+++ G D Y++ T+AMG + L++
Sbjct: 385 QAESGDILFFGADSYKIVTDAMGALRLKV 413
>sp|Q66AU4|SYD_YERPS Aspartate--tRNA ligase OS=Yersinia pseudotuberculosis serotype I
(strain IP32953) GN=aspS PE=3 SV=1
Length = 598
Score = 28.9 bits (63), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 21/29 (72%)
Query: 46 QLKSPDLVYTGLDRYRLHTEAMGCVHLEL 74
Q +S D+++ G D Y++ T+AMG + L++
Sbjct: 385 QAESGDILFFGADSYKIVTDAMGALRLKV 413
>sp|A4TJK5|SYD_YERPP Aspartate--tRNA ligase OS=Yersinia pestis (strain Pestoides F)
GN=aspS PE=3 SV=1
Length = 598
Score = 28.9 bits (63), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 21/29 (72%)
Query: 46 QLKSPDLVYTGLDRYRLHTEAMGCVHLEL 74
Q +S D+++ G D Y++ T+AMG + L++
Sbjct: 385 QAESGDILFFGADSYKIVTDAMGALRLKV 413
>sp|Q1CJH0|SYD_YERPN Aspartate--tRNA ligase OS=Yersinia pestis bv. Antiqua (strain
Nepal516) GN=aspS PE=3 SV=1
Length = 598
Score = 28.9 bits (63), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 21/29 (72%)
Query: 46 QLKSPDLVYTGLDRYRLHTEAMGCVHLEL 74
Q +S D+++ G D Y++ T+AMG + L++
Sbjct: 385 QAESGDILFFGADSYKIVTDAMGALRLKV 413
>sp|A9QYX8|SYD_YERPG Aspartate--tRNA ligase OS=Yersinia pestis bv. Antiqua (strain
Angola) GN=aspS PE=3 SV=1
Length = 598
Score = 28.9 bits (63), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 21/29 (72%)
Query: 46 QLKSPDLVYTGLDRYRLHTEAMGCVHLEL 74
Q +S D+++ G D Y++ T+AMG + L++
Sbjct: 385 QAESGDILFFGADSYKIVTDAMGALRLKV 413
>sp|Q8ZEV0|SYD_YERPE Aspartate--tRNA ligase OS=Yersinia pestis GN=aspS PE=3 SV=1
Length = 598
Score = 28.9 bits (63), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 21/29 (72%)
Query: 46 QLKSPDLVYTGLDRYRLHTEAMGCVHLEL 74
Q +S D+++ G D Y++ T+AMG + L++
Sbjct: 385 QAESGDILFFGADSYKIVTDAMGALRLKV 413
>sp|B2K319|SYD_YERPB Aspartate--tRNA ligase OS=Yersinia pseudotuberculosis serotype IB
(strain PB1/+) GN=aspS PE=3 SV=1
Length = 598
Score = 28.9 bits (63), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 21/29 (72%)
Query: 46 QLKSPDLVYTGLDRYRLHTEAMGCVHLEL 74
Q +S D+++ G D Y++ T+AMG + L++
Sbjct: 385 QAESGDILFFGADSYKIVTDAMGALRLKV 413
>sp|Q1C820|SYD_YERPA Aspartate--tRNA ligase OS=Yersinia pestis bv. Antiqua (strain
Antiqua) GN=aspS PE=3 SV=1
Length = 598
Score = 28.9 bits (63), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 21/29 (72%)
Query: 46 QLKSPDLVYTGLDRYRLHTEAMGCVHLEL 74
Q +S D+++ G D Y++ T+AMG + L++
Sbjct: 385 QAESGDILFFGADSYKIVTDAMGALRLKV 413
>sp|A7FID0|SYD_YERP3 Aspartate--tRNA ligase OS=Yersinia pseudotuberculosis serotype O:1b
(strain IP 31758) GN=aspS PE=3 SV=1
Length = 598
Score = 28.9 bits (63), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 21/29 (72%)
Query: 46 QLKSPDLVYTGLDRYRLHTEAMGCVHLEL 74
Q +S D+++ G D Y++ T+AMG + L++
Sbjct: 385 QAESGDILFFGADSYKIVTDAMGALRLKV 413
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.146 0.451
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,090,693
Number of Sequences: 539616
Number of extensions: 1443574
Number of successful extensions: 2271
Number of sequences better than 100.0: 29
Number of HSP's better than 100.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 2233
Number of HSP's gapped (non-prelim): 39
length of query: 88
length of database: 191,569,459
effective HSP length: 58
effective length of query: 30
effective length of database: 160,271,731
effective search space: 4808151930
effective search space used: 4808151930
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)