Query psy4571
Match_columns 437
No_of_seqs 462 out of 3624
Neff 10.4
Searched_HMMs 29240
Date Fri Aug 16 20:26:33 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4571.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/4571hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gqb_B Methylosome protein 50; 100.0 9.8E-41 3.4E-45 312.8 30.8 270 35-340 31-333 (344)
2 4g56_B MGC81050 protein; prote 100.0 2.3E-40 7.8E-45 312.4 28.7 278 34-345 42-350 (357)
3 2ynn_A Coatomer subunit beta'; 100.0 7.5E-40 2.6E-44 302.0 31.2 273 31-363 10-284 (304)
4 3ow8_A WD repeat-containing pr 100.0 2.9E-39 9.8E-44 300.4 33.6 271 31-337 29-320 (321)
5 1vyh_C Platelet-activating fac 100.0 5.6E-39 1.9E-43 308.7 34.9 267 33-336 107-409 (410)
6 1got_B GT-beta; complex (GTP-b 100.0 3.5E-39 1.2E-43 302.4 31.0 279 30-367 51-330 (340)
7 1nr0_A Actin interacting prote 100.0 1.3E-38 4.5E-43 321.8 32.9 334 20-373 39-522 (611)
8 2pbi_B Guanine nucleotide-bind 100.0 2.9E-38 9.8E-43 297.8 31.6 280 30-367 60-344 (354)
9 4gqb_B Methylosome protein 50; 100.0 1E-38 3.5E-43 299.2 26.8 278 66-374 30-332 (344)
10 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.6E-37 5.4E-42 291.7 34.9 295 34-344 16-341 (345)
11 3iz6_a 40S ribosomal protein R 100.0 3E-38 1E-42 300.6 29.1 287 30-340 62-377 (380)
12 1vyh_C Platelet-activating fac 100.0 7.5E-38 2.6E-42 300.9 30.1 270 62-367 104-398 (410)
13 2ymu_A WD-40 repeat protein; u 100.0 3.5E-37 1.2E-41 309.2 35.6 293 33-367 261-567 (577)
14 3ow8_A WD repeat-containing pr 100.0 8.8E-38 3E-42 290.3 28.4 272 60-367 26-308 (321)
15 4g56_B MGC81050 protein; prote 100.0 1E-37 3.5E-42 294.2 27.3 297 47-374 16-344 (357)
16 4ery_A WD repeat-containing pr 100.0 1.2E-36 4E-41 281.6 33.1 276 31-366 20-296 (312)
17 3frx_A Guanine nucleotide-bind 100.0 4.1E-36 1.4E-40 278.9 34.0 276 29-339 12-318 (319)
18 1nr0_A Actin interacting prote 100.0 1.2E-36 4.1E-41 307.4 32.2 318 24-373 9-355 (611)
19 2pm9_A Protein WEB1, protein t 100.0 4.1E-37 1.4E-41 295.7 27.0 308 35-372 13-413 (416)
20 3iz6_a 40S ribosomal protein R 100.0 3.1E-37 1.1E-41 293.6 24.3 288 59-373 59-375 (380)
21 2hes_X YDR267CP; beta-propelle 100.0 5.2E-36 1.8E-40 279.6 31.8 283 31-338 11-328 (330)
22 4e54_B DNA damage-binding prot 100.0 5.6E-37 1.9E-41 297.2 25.1 301 34-374 119-431 (435)
23 2xzm_R RACK1; ribosome, transl 100.0 2.6E-35 9E-40 276.3 34.4 278 30-340 17-342 (343)
24 2ynn_A Coatomer subunit beta'; 100.0 9.1E-37 3.1E-41 281.4 23.2 238 102-372 12-258 (304)
25 2ymu_A WD-40 repeat protein; u 100.0 2.1E-35 7E-40 296.3 34.7 299 33-373 220-539 (577)
26 3fm0_A Protein CIAO1; WDR39,SG 100.0 2E-35 6.9E-40 277.4 29.1 288 61-376 10-338 (345)
27 1erj_A Transcriptional repress 100.0 1.1E-34 3.9E-39 277.2 33.3 279 33-338 63-389 (393)
28 3frx_A Guanine nucleotide-bind 100.0 1E-34 3.5E-39 269.5 31.0 273 61-371 12-315 (319)
29 1r5m_A SIR4-interacting protei 100.0 2.8E-35 9.6E-40 283.2 28.0 295 34-367 45-412 (425)
30 3vl1_A 26S proteasome regulato 100.0 2E-35 7E-40 284.5 27.0 291 37-362 59-398 (420)
31 2hes_X YDR267CP; beta-propelle 100.0 6.3E-35 2.2E-39 272.2 28.2 285 59-372 7-327 (330)
32 3ei3_B DNA damage-binding prot 100.0 2.3E-34 7.9E-39 273.9 32.4 286 30-372 69-381 (383)
33 2pm7_B Protein transport prote 100.0 4.3E-34 1.5E-38 262.5 32.3 256 32-337 7-284 (297)
34 2pm9_A Protein WEB1, protein t 100.0 9.2E-35 3.1E-39 279.3 28.9 277 33-339 66-415 (416)
35 2xzm_R RACK1; ribosome, transl 100.0 8.7E-34 3E-38 266.0 33.1 274 59-371 14-338 (343)
36 4aow_A Guanine nucleotide-bind 100.0 1E-33 3.5E-38 264.4 33.3 277 30-340 34-339 (340)
37 1gxr_A ESG1, transducin-like e 100.0 5.2E-34 1.8E-38 265.7 30.0 298 32-367 7-324 (337)
38 1got_B GT-beta; complex (GTP-b 100.0 7.5E-34 2.6E-38 266.1 31.0 240 33-319 96-335 (340)
39 1erj_A Transcriptional repress 100.0 4.7E-34 1.6E-38 272.9 28.9 282 64-372 62-388 (393)
40 3sfz_A APAF-1, apoptotic pepti 100.0 2.5E-34 8.5E-39 313.4 29.7 318 32-373 613-1116(1249)
41 2j04_B YDR362CP, TAU91; beta p 100.0 1.5E-34 5E-39 284.6 22.9 258 34-324 133-425 (524)
42 1gxr_A ESG1, transducin-like e 100.0 1.8E-32 6.3E-37 255.2 35.3 264 33-337 50-336 (337)
43 3dm0_A Maltose-binding peripla 100.0 1.1E-33 3.8E-38 290.1 29.6 284 30-372 378-692 (694)
44 1sq9_A Antiviral protein SKI8; 100.0 3.5E-33 1.2E-37 266.7 30.9 278 29-340 11-397 (397)
45 4h5i_A Guanine nucleotide-exch 100.0 1.3E-33 4.4E-38 267.0 26.9 271 34-339 14-344 (365)
46 3zwl_B Eukaryotic translation 100.0 2.5E-32 8.6E-37 257.5 35.1 285 26-344 24-352 (369)
47 3k26_A Polycomb protein EED; W 100.0 1.5E-33 5.1E-38 265.7 26.1 285 32-337 16-365 (366)
48 2oaj_A Protein SNI1; WD40 repe 100.0 1.2E-33 4E-38 296.3 27.9 188 34-228 17-245 (902)
49 4aez_A CDC20, WD repeat-contai 100.0 4.4E-33 1.5E-37 266.9 28.6 266 48-375 104-382 (401)
50 3bg1_A Protein SEC13 homolog; 100.0 8.9E-34 3E-38 262.8 22.7 254 31-337 10-292 (316)
51 1k8k_C P40, ARP2/3 complex 41 100.0 1.5E-32 5.1E-37 259.8 31.3 281 31-342 5-365 (372)
52 3i2n_A WD repeat-containing pr 100.0 9.8E-33 3.3E-37 259.4 29.8 281 33-341 17-356 (357)
53 2pbi_B Guanine nucleotide-bind 100.0 1.1E-32 3.8E-37 259.5 29.9 242 34-319 106-349 (354)
54 4a11_B DNA excision repair pro 100.0 3.8E-32 1.3E-36 260.0 32.9 289 31-348 40-375 (408)
55 4gga_A P55CDC, cell division c 100.0 2.8E-32 9.4E-37 263.0 31.6 238 102-372 146-394 (420)
56 3v7d_B Cell division control p 100.0 6E-32 2E-36 263.9 33.5 281 37-358 125-442 (464)
57 2pm7_B Protein transport prote 100.0 1.5E-32 5E-37 252.3 25.4 245 101-372 7-284 (297)
58 3dwl_C Actin-related protein 2 100.0 6.2E-33 2.1E-37 263.3 23.1 232 33-281 10-280 (377)
59 1r5m_A SIR4-interacting protei 100.0 6.4E-32 2.2E-36 259.7 30.0 265 34-337 108-424 (425)
60 3dw8_B Serine/threonine-protei 100.0 9.8E-32 3.3E-36 260.8 31.5 263 33-318 27-438 (447)
61 3odt_A Protein DOA1; ubiquitin 100.0 1.5E-31 5.2E-36 246.5 30.6 275 31-374 15-297 (313)
62 3gre_A Serine/threonine-protei 100.0 1.8E-32 6.3E-37 265.5 25.3 280 31-320 60-433 (437)
63 1pgu_A Actin interacting prote 100.0 6.3E-32 2.1E-36 272.7 30.1 318 33-373 62-614 (615)
64 3k26_A Polycomb protein EED; W 100.0 2.8E-32 9.6E-37 257.0 25.5 288 60-367 12-353 (366)
65 3sfz_A APAF-1, apoptotic pepti 100.0 1.8E-32 6E-37 298.8 27.7 297 33-367 881-1236(1249)
66 2oaj_A Protein SNI1; WD40 repe 100.0 8.2E-32 2.8E-36 282.3 31.3 317 34-371 58-659 (902)
67 3i2n_A WD repeat-containing pr 100.0 2.9E-32 9.8E-37 256.2 24.9 283 60-373 12-353 (357)
68 2j04_A TAU60, YPL007P, hypothe 100.0 9.1E-33 3.1E-37 266.2 21.5 291 35-366 16-347 (588)
69 2aq5_A Coronin-1A; WD40 repeat 100.0 1.8E-31 6.3E-36 255.7 30.1 283 26-341 26-345 (402)
70 4ery_A WD repeat-containing pr 100.0 7.2E-32 2.5E-36 249.3 26.0 237 102-373 22-268 (312)
71 3zwl_B Eukaryotic translation 100.0 2.6E-31 8.9E-36 250.5 30.3 293 59-376 25-349 (369)
72 1yfq_A Cell cycle arrest prote 100.0 8.5E-32 2.9E-36 251.7 26.7 277 32-370 9-313 (342)
73 4aow_A Guanine nucleotide-bind 100.0 2.9E-31 9.8E-36 247.7 29.7 276 62-373 34-337 (340)
74 2j04_B YDR362CP, TAU91; beta p 100.0 2.4E-32 8.1E-37 268.9 23.2 217 45-282 171-428 (524)
75 3jrp_A Fusion protein of prote 100.0 3.1E-31 1E-35 251.1 29.9 260 31-340 8-289 (379)
76 1pgu_A Actin interacting prote 100.0 2.9E-31 9.8E-36 267.9 31.2 290 32-360 16-349 (615)
77 1sq9_A Antiviral protein SKI8; 100.0 5.8E-32 2E-36 258.2 24.0 269 59-361 9-366 (397)
78 4ggc_A P55CDC, cell division c 100.0 9.2E-31 3.2E-35 241.9 31.0 274 38-371 29-313 (318)
79 3mkq_A Coatomer beta'-subunit; 100.0 9.8E-32 3.4E-36 280.5 27.3 272 31-363 10-284 (814)
80 2xyi_A Probable histone-bindin 100.0 3.5E-31 1.2E-35 256.1 29.1 251 32-283 126-411 (430)
81 2ovr_B FBW7, F-BOX/WD repeat p 100.0 8.8E-31 3E-35 254.4 31.3 283 37-366 122-424 (445)
82 1k8k_C P40, ARP2/3 complex 41 100.0 5.6E-31 1.9E-35 248.9 29.2 295 61-375 3-363 (372)
83 4e54_B DNA damage-binding prot 100.0 3E-32 1E-36 263.9 20.0 221 101-350 117-339 (435)
84 2aq5_A Coronin-1A; WD40 repeat 100.0 3E-31 1E-35 254.2 26.6 272 73-373 41-342 (402)
85 3vl1_A 26S proteasome regulato 100.0 1.1E-30 3.8E-35 251.4 30.4 271 36-337 98-418 (420)
86 3f3f_A Nucleoporin SEH1; struc 100.0 4.2E-31 1.4E-35 246.6 26.5 264 32-345 9-344 (351)
87 3dwl_C Actin-related protein 2 100.0 1.2E-31 3.9E-36 254.5 22.2 253 60-320 5-275 (377)
88 3gre_A Serine/threonine-protei 100.0 8.2E-32 2.8E-36 260.9 20.9 276 42-349 35-370 (437)
89 4aez_A CDC20, WD repeat-contai 100.0 2.5E-30 8.6E-35 247.7 30.7 251 35-347 135-389 (401)
90 3bg1_A Protein SEC13 homolog; 100.0 4.1E-32 1.4E-36 251.6 15.6 245 101-372 11-292 (316)
91 3dw8_B Serine/threonine-protei 100.0 1E-30 3.5E-35 253.6 26.2 252 66-342 28-377 (447)
92 4a11_B DNA excision repair pro 100.0 4.2E-30 1.4E-34 245.8 29.4 302 58-376 35-368 (408)
93 4gq1_A NUP37; propeller, trans 100.0 1.1E-31 3.7E-36 256.4 16.6 320 28-367 12-377 (393)
94 3ei3_B DNA damage-binding prot 100.0 3.9E-30 1.3E-34 244.7 27.0 257 33-338 117-382 (383)
95 3dm0_A Maltose-binding peripla 100.0 1.4E-30 4.6E-35 267.2 25.5 244 101-373 380-632 (694)
96 1p22_A F-BOX/WD-repeat protein 100.0 1.6E-29 5.4E-34 244.9 30.3 264 35-345 134-421 (435)
97 3lrv_A PRE-mRNA-splicing facto 100.0 1.3E-30 4.4E-35 244.4 22.0 245 34-340 36-294 (343)
98 2xyi_A Probable histone-bindin 100.0 4.2E-30 1.4E-34 248.5 25.9 253 98-375 123-412 (430)
99 4gga_A P55CDC, cell division c 100.0 6.4E-29 2.2E-33 239.4 33.8 269 20-350 125-407 (420)
100 3mkq_A Coatomer beta'-subunit; 100.0 3.7E-29 1.3E-33 261.0 31.1 298 32-367 53-410 (814)
101 3mmy_A MRNA export factor; mRN 100.0 2.2E-29 7.7E-34 237.1 26.4 278 30-367 35-333 (368)
102 3jro_A Fusion protein of prote 100.0 2E-29 6.7E-34 260.4 28.1 255 31-324 6-282 (753)
103 3vu4_A KMHSV2; beta-propeller 100.0 1.1E-28 3.6E-33 232.5 29.9 271 31-342 16-340 (355)
104 3jrp_A Fusion protein of prote 100.0 1.4E-29 4.8E-34 239.7 23.5 244 101-372 9-286 (379)
105 3f3f_A Nucleoporin SEH1; struc 100.0 1.9E-29 6.4E-34 235.4 23.0 267 101-373 9-337 (351)
106 2vdu_B TRNA (guanine-N(7)-)-me 100.0 7.5E-28 2.5E-32 234.1 33.2 273 35-316 5-374 (450)
107 3v7d_B Cell division control p 100.0 9.7E-29 3.3E-33 241.2 25.8 271 61-373 116-421 (464)
108 2vdu_B TRNA (guanine-N(7)-)-me 100.0 7.1E-29 2.4E-33 241.3 24.4 263 69-363 7-368 (450)
109 4h5i_A Guanine nucleotide-exch 100.0 1.2E-28 3.9E-33 233.0 24.7 274 67-372 15-342 (365)
110 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1.7E-27 5.9E-32 231.1 33.2 265 33-338 158-442 (445)
111 4gq1_A NUP37; propeller, trans 100.0 6E-29 2.1E-33 237.4 21.7 247 45-319 99-382 (393)
112 3odt_A Protein DOA1; ubiquitin 100.0 1.3E-27 4.4E-32 220.2 28.3 243 34-345 59-303 (313)
113 1p22_A F-BOX/WD-repeat protein 100.0 1.4E-27 4.9E-32 231.0 28.5 260 67-375 134-416 (435)
114 2w18_A PALB2, fancn, partner a 100.0 1.4E-27 4.8E-32 216.6 26.4 284 11-336 14-355 (356)
115 4ggc_A P55CDC, cell division c 100.0 4.9E-27 1.7E-31 216.9 30.2 258 20-339 45-316 (318)
116 3jro_A Fusion protein of prote 100.0 2.1E-28 7.2E-33 252.7 21.7 244 101-372 7-284 (753)
117 1l0q_A Surface layer protein; 100.0 8.2E-27 2.8E-31 222.2 30.1 269 48-352 3-289 (391)
118 2j04_A TAU60, YPL007P, hypothe 100.0 1.4E-27 4.6E-32 230.3 24.3 261 67-372 16-296 (588)
119 1yfq_A Cell cycle arrest prote 100.0 4.8E-28 1.6E-32 226.1 19.9 237 101-373 9-282 (342)
120 3lrv_A PRE-mRNA-splicing facto 100.0 4.7E-27 1.6E-31 220.1 22.5 238 36-323 78-329 (343)
121 3bws_A Protein LP49; two-domai 100.0 7.7E-27 2.6E-31 225.5 22.9 280 37-365 125-416 (433)
122 2w18_A PALB2, fancn, partner a 99.9 6.4E-26 2.2E-30 205.8 26.3 213 32-280 109-355 (356)
123 1l0q_A Surface layer protein; 99.9 1.5E-26 5.1E-31 220.4 22.9 247 81-364 6-258 (391)
124 3mmy_A MRNA export factor; mRN 99.9 6.5E-25 2.2E-29 206.5 26.6 236 34-320 86-339 (368)
125 3vu4_A KMHSV2; beta-propeller 99.9 1.2E-24 4.2E-29 204.7 23.9 251 62-339 15-272 (355)
126 1nir_A Nitrite reductase; hemo 99.9 3.9E-24 1.3E-28 211.9 26.8 303 42-371 145-500 (543)
127 2hqs_A Protein TOLB; TOLB, PAL 99.9 1E-23 3.5E-28 202.5 28.8 288 36-361 64-409 (415)
128 3bws_A Protein LP49; two-domai 99.9 3.9E-24 1.3E-28 206.5 25.8 306 21-365 14-360 (433)
129 1nir_A Nitrite reductase; hemo 99.9 2.7E-22 9.3E-27 198.7 26.1 289 37-349 181-525 (543)
130 3u4y_A Uncharacterized protein 99.9 2.5E-21 8.5E-26 179.8 27.0 276 40-373 3-304 (331)
131 3vgz_A Uncharacterized protein 99.9 5.6E-21 1.9E-25 178.9 28.6 271 36-366 42-330 (353)
132 2ecf_A Dipeptidyl peptidase IV 99.9 7.2E-22 2.5E-26 203.9 23.7 294 33-366 35-441 (741)
133 2ojh_A Uncharacterized protein 99.9 2.1E-21 7.2E-26 176.5 24.1 247 53-318 18-293 (297)
134 2hqs_A Protein TOLB; TOLB, PAL 99.9 3E-22 1E-26 192.3 19.0 242 88-366 94-370 (415)
135 2ojh_A Uncharacterized protein 99.9 4.5E-22 1.6E-26 181.0 19.2 259 84-366 19-288 (297)
136 1ri6_A Putative isomerase YBHE 99.9 9.7E-21 3.3E-25 176.3 26.9 260 49-319 7-300 (343)
137 2oit_A Nucleoporin 214KDA; NH2 99.9 8.3E-22 2.8E-26 190.0 19.5 228 33-284 35-280 (434)
138 1xfd_A DIP, dipeptidyl aminope 99.9 4.2E-21 1.5E-25 197.6 21.7 293 37-366 19-426 (723)
139 1ri6_A Putative isomerase YBHE 99.9 2E-20 6.9E-25 174.2 21.5 259 82-366 10-293 (343)
140 2oit_A Nucleoporin 214KDA; NH2 99.9 3.6E-21 1.2E-25 185.6 15.8 212 104-339 37-279 (434)
141 3hfq_A Uncharacterized protein 99.9 2.8E-19 9.7E-24 167.2 27.7 217 103-342 85-323 (347)
142 3u4y_A Uncharacterized protein 99.9 1.2E-19 4.1E-24 168.4 24.4 247 39-340 44-306 (331)
143 1pby_B Quinohemoprotein amine 99.8 8.3E-20 2.8E-24 169.5 21.8 260 48-348 2-320 (337)
144 2z3z_A Dipeptidyl aminopeptida 99.8 2.4E-19 8.2E-24 184.0 25.9 272 35-340 82-437 (706)
145 2z3z_A Dipeptidyl aminopeptida 99.8 3.9E-20 1.3E-24 189.9 19.8 295 36-365 27-416 (706)
146 1k32_A Tricorn protease; prote 99.8 2.4E-19 8.2E-24 191.7 25.3 250 84-366 221-488 (1045)
147 1k32_A Tricorn protease; prote 99.8 4.4E-19 1.5E-23 189.7 25.6 258 34-323 203-498 (1045)
148 2ecf_A Dipeptidyl peptidase IV 99.8 3E-19 1E-23 184.3 23.2 267 66-364 36-394 (741)
149 1xfd_A DIP, dipeptidyl aminope 99.8 6.8E-20 2.3E-24 188.6 17.6 276 68-365 18-375 (723)
150 3vgz_A Uncharacterized protein 99.8 5.6E-18 1.9E-22 158.4 26.4 187 106-318 143-335 (353)
151 3o4h_A Acylamino-acid-releasin 99.8 5.4E-19 1.8E-23 177.3 20.5 249 34-319 21-304 (582)
152 3scy_A Hypothetical bacterial 99.8 3.6E-18 1.2E-22 160.6 24.4 214 105-343 101-344 (361)
153 1jmx_B Amine dehydrogenase; ox 99.8 1.9E-18 6.7E-23 161.2 21.4 255 41-348 6-335 (349)
154 3hfq_A Uncharacterized protein 99.8 1E-18 3.5E-23 163.4 18.8 237 104-366 40-302 (347)
155 1z68_A Fibroblast activation p 99.8 1.5E-18 5E-23 178.5 17.8 292 39-365 20-425 (719)
156 1jof_A Carboxy-CIS,CIS-muconat 99.8 1.2E-16 4.2E-21 150.5 25.9 211 106-339 85-342 (365)
157 3scy_A Hypothetical bacterial 99.8 5.2E-17 1.8E-21 152.7 23.2 242 104-366 50-322 (361)
158 1z68_A Fibroblast activation p 99.7 7.8E-18 2.7E-22 173.1 15.0 263 71-358 20-365 (719)
159 3o4h_A Acylamino-acid-releasin 99.7 3.4E-17 1.2E-21 164.2 18.8 253 67-365 22-297 (582)
160 1pby_B Quinohemoprotein amine 99.7 7.3E-16 2.5E-20 142.8 24.8 227 36-291 35-319 (337)
161 3pe7_A Oligogalacturonate lyas 99.7 3.9E-16 1.3E-20 148.0 23.4 273 40-365 41-366 (388)
162 3fvz_A Peptidyl-glycine alpha- 99.7 1.1E-15 3.8E-20 141.8 24.1 268 34-338 23-322 (329)
163 1jmx_B Amine dehydrogenase; ox 99.7 4.5E-17 1.5E-21 151.9 13.2 223 108-366 4-311 (349)
164 4a5s_A Dipeptidyl peptidase 4 99.7 8.9E-16 3E-20 158.2 23.6 253 37-343 19-358 (740)
165 1q7f_A NHL, brain tumor CG1071 99.7 2.1E-14 7.3E-19 130.1 27.0 244 35-338 30-280 (286)
166 1jof_A Carboxy-CIS,CIS-muconat 99.7 4.4E-16 1.5E-20 146.7 15.6 239 105-366 41-326 (365)
167 4a5s_A Dipeptidyl peptidase 4 99.7 1.1E-15 3.8E-20 157.5 19.1 238 104-365 17-334 (740)
168 3fvz_A Peptidyl-glycine alpha- 99.7 1.8E-14 6E-19 133.6 23.8 230 104-366 24-308 (329)
169 2oiz_A Aromatic amine dehydrog 99.6 3.3E-14 1.1E-18 133.5 23.1 271 55-362 29-360 (361)
170 2dg1_A DRP35, lactonase; beta 99.6 6E-14 2E-18 130.1 21.8 262 37-362 8-292 (333)
171 3azo_A Aminopeptidase; POP fam 99.6 6.6E-14 2.3E-18 142.4 20.9 230 35-284 24-327 (662)
172 2xdw_A Prolyl endopeptidase; a 99.6 6.8E-13 2.3E-17 136.1 26.9 231 36-312 126-395 (710)
173 3c5m_A Oligogalacturonate lyas 99.6 1.7E-14 5.7E-19 136.9 13.3 228 108-365 85-366 (396)
174 1qks_A Cytochrome CD1 nitrite 99.6 4.5E-12 1.5E-16 125.3 30.0 304 45-370 165-523 (567)
175 1rwi_B Serine/threonine-protei 99.5 1.2E-12 4.2E-17 117.2 22.5 241 36-341 25-267 (270)
176 2dg1_A DRP35, lactonase; beta 99.5 9.1E-12 3.1E-16 115.3 28.8 239 36-317 46-300 (333)
177 2oiz_A Aromatic amine dehydrog 99.5 2.9E-12 1E-16 120.2 25.3 244 39-309 54-360 (361)
178 3azo_A Aminopeptidase; POP fam 99.5 2.2E-13 7.4E-18 138.6 18.5 232 102-365 22-309 (662)
179 3e5z_A Putative gluconolactona 99.5 8.8E-13 3E-17 120.1 19.8 220 105-365 29-272 (296)
180 1q7f_A NHL, brain tumor CG1071 99.5 1.1E-11 3.8E-16 112.1 26.7 155 104-284 121-282 (286)
181 1qks_A Cytochrome CD1 nitrite 99.5 5.4E-12 1.9E-16 124.7 26.3 254 81-363 171-453 (567)
182 3pe7_A Oligogalacturonate lyas 99.5 2.5E-13 8.6E-18 128.5 15.6 229 106-365 38-305 (388)
183 3e5z_A Putative gluconolactona 99.5 2.7E-12 9.3E-17 116.8 21.2 228 35-319 28-279 (296)
184 2z2n_A Virginiamycin B lyase; 99.5 9.7E-11 3.3E-15 106.2 29.8 265 33-362 13-278 (299)
185 3dsm_A Uncharacterized protein 99.5 4.6E-12 1.6E-16 117.2 20.2 226 81-345 58-308 (328)
186 2bkl_A Prolyl endopeptidase; m 99.5 3.7E-12 1.3E-16 130.2 21.4 185 107-312 171-378 (695)
187 3no2_A Uncharacterized protein 99.5 1.8E-12 6.1E-17 116.7 16.8 196 116-346 5-203 (276)
188 2gop_A Trilobed protease; beta 99.5 8.5E-12 2.9E-16 116.1 22.0 223 56-319 42-322 (347)
189 2xdw_A Prolyl endopeptidase; a 99.4 1.6E-12 5.5E-17 133.3 17.4 231 105-365 126-395 (710)
190 3no2_A Uncharacterized protein 99.4 6.6E-11 2.3E-15 106.4 23.5 217 46-315 4-231 (276)
191 2gop_A Trilobed protease; beta 99.4 3.4E-12 1.2E-16 118.8 15.3 223 86-359 42-311 (347)
192 1xip_A Nucleoporin NUP159; bet 99.4 4.9E-12 1.7E-16 118.2 15.7 176 105-313 39-230 (388)
193 1pjx_A Dfpase, DIISOPROPYLFLUO 99.4 2E-10 7E-15 105.0 26.2 224 36-282 19-299 (314)
194 1rwi_B Serine/threonine-protei 99.4 1.3E-11 4.5E-16 110.4 16.9 221 105-363 25-247 (270)
195 3c5m_A Oligogalacturonate lyas 99.4 6.4E-11 2.2E-15 112.0 22.4 218 40-283 86-385 (396)
196 3g4e_A Regucalcin; six bladed 99.4 2.7E-10 9.2E-15 103.7 25.3 231 38-315 16-260 (297)
197 2qc5_A Streptogramin B lactona 99.4 1.8E-09 6.3E-14 97.7 29.5 265 34-362 19-284 (300)
198 2bkl_A Prolyl endopeptidase; m 99.3 1.4E-11 4.7E-16 126.0 16.4 227 105-365 122-378 (695)
199 1yr2_A Prolyl oligopeptidase; 99.3 1.8E-10 6.3E-15 118.5 24.2 229 36-312 164-422 (741)
200 1pjx_A Dfpase, DIISOPROPYLFLUO 99.3 4.4E-10 1.5E-14 102.8 24.2 216 84-319 43-291 (314)
201 3dsm_A Uncharacterized protein 99.3 3.3E-10 1.1E-14 104.7 23.3 228 38-291 47-310 (328)
202 3hrp_A Uncharacterized protein 99.3 8.1E-10 2.8E-14 105.2 26.4 202 109-319 176-402 (409)
203 2z2n_A Virginiamycin B lyase; 99.3 3.7E-09 1.3E-13 95.7 29.7 189 104-318 99-287 (299)
204 3g4e_A Regucalcin; six bladed 99.3 1.1E-10 3.9E-15 106.2 19.3 224 106-363 15-255 (297)
205 1xip_A Nucleoporin NUP159; bet 99.3 1.8E-10 6.3E-15 107.6 19.5 189 36-266 39-229 (388)
206 2mad_H Methylamine dehydrogena 99.3 8.6E-09 2.9E-13 96.7 29.6 259 58-345 48-357 (373)
207 2ghs_A AGR_C_1268P; regucalcin 99.2 8.1E-09 2.8E-13 95.2 28.0 190 103-315 89-290 (326)
208 3iuj_A Prolyl endopeptidase; h 99.2 1.3E-09 4.6E-14 111.1 24.7 188 107-314 178-388 (693)
209 2qc5_A Streptogramin B lactona 99.2 4.4E-08 1.5E-12 88.5 29.7 186 104-315 104-290 (300)
210 2ghs_A AGR_C_1268P; regucalcin 99.2 2.4E-09 8.1E-14 98.8 21.4 217 107-363 52-285 (326)
211 3sjl_D Methylamine dehydrogena 99.1 6.3E-09 2.2E-13 96.8 21.6 269 45-348 42-373 (386)
212 3hrp_A Uncharacterized protein 99.1 1.7E-09 6E-14 102.9 18.2 209 105-348 132-363 (409)
213 2mad_H Methylamine dehydrogena 99.1 2.1E-07 7.3E-12 87.2 28.2 232 39-289 70-357 (373)
214 1yr2_A Prolyl oligopeptidase; 99.1 2.4E-09 8.2E-14 110.2 15.9 227 105-365 164-422 (741)
215 3c75_H MADH, methylamine dehyd 99.0 1.3E-08 4.4E-13 96.4 19.6 234 87-345 99-409 (426)
216 3sjl_D Methylamine dehydrogena 99.0 3.3E-08 1.1E-12 92.0 21.9 241 40-307 83-384 (386)
217 3dr2_A Exported gluconolactona 99.0 8.3E-09 2.8E-13 94.1 17.8 217 105-363 46-290 (305)
218 3iuj_A Prolyl endopeptidase; h 99.0 3.5E-09 1.2E-13 108.0 15.8 227 104-365 129-386 (693)
219 2hz6_A Endoplasmic reticulum t 99.0 3.8E-11 1.3E-15 112.9 0.6 204 115-362 8-216 (369)
220 2qe8_A Uncharacterized protein 99.0 8.8E-08 3E-12 88.9 22.1 249 35-319 17-313 (343)
221 1npe_A Nidogen, entactin; glyc 99.0 1.6E-07 5.4E-12 83.7 22.8 224 105-362 37-263 (267)
222 3dr2_A Exported gluconolactona 99.0 5.9E-08 2E-12 88.4 19.4 189 105-319 87-299 (305)
223 1mda_H Methylamine dehydrogena 98.9 1.1E-08 3.7E-13 95.3 13.3 214 108-349 69-357 (368)
224 2ece_A 462AA long hypothetical 98.9 2E-07 6.9E-12 87.5 19.8 227 82-315 101-399 (462)
225 1npe_A Nidogen, entactin; glyc 98.8 9.8E-06 3.4E-10 72.0 29.4 182 105-309 80-263 (267)
226 2hz6_A Endoplasmic reticulum t 98.8 6.7E-10 2.3E-14 104.3 2.0 188 46-290 8-200 (369)
227 2qe8_A Uncharacterized protein 98.8 7E-08 2.4E-12 89.5 15.3 241 104-362 17-303 (343)
228 1kb0_A Quinohemoprotein alcoho 98.8 3.1E-07 1.1E-11 93.1 20.1 174 154-346 247-515 (677)
229 3c75_H MADH, methylamine dehyd 98.8 1.3E-06 4.3E-11 82.8 22.8 228 39-289 122-409 (426)
230 1yiq_A Quinohemoprotein alcoho 98.8 4.3E-07 1.5E-11 92.3 20.5 294 47-363 70-531 (689)
231 2ece_A 462AA long hypothetical 98.8 8E-08 2.7E-12 90.2 13.6 230 108-366 86-397 (462)
232 1mda_H Methylamine dehydrogena 98.8 2E-07 6.9E-12 86.7 16.1 228 39-291 69-355 (368)
233 3nol_A Glutamine cyclotransfer 98.7 1.5E-06 5E-11 75.8 17.1 203 89-315 26-243 (262)
234 2iwa_A Glutamine cyclotransfer 98.6 1.5E-06 5.2E-11 76.5 17.3 201 96-319 11-229 (266)
235 1fwx_A Nitrous oxide reductase 98.6 3.1E-07 1.1E-11 89.2 13.7 234 116-366 102-404 (595)
236 1yiq_A Quinohemoprotein alcoho 98.6 9.5E-06 3.2E-10 82.4 25.1 244 47-314 121-536 (689)
237 1fwx_A Nitrous oxide reductase 98.6 5.4E-07 1.8E-11 87.5 14.9 220 85-316 110-407 (595)
238 2iwa_A Glutamine cyclotransfer 98.6 1.2E-05 4.1E-10 70.8 22.0 197 38-283 24-238 (266)
239 1ijq_A LDL receptor, low-densi 98.6 3.1E-05 1.1E-09 70.7 25.7 213 105-345 31-245 (316)
240 1kb0_A Quinohemoprotein alcoho 98.6 1.6E-05 5.6E-10 80.4 25.9 242 47-312 128-535 (677)
241 3v64_C Agrin; beta propeller, 98.6 4.7E-05 1.6E-09 70.5 25.9 162 104-283 73-235 (349)
242 3v65_B Low-density lipoprotein 98.6 1.7E-05 5.8E-10 74.6 22.9 233 80-345 89-325 (386)
243 3nok_A Glutaminyl cyclase; bet 98.5 2.6E-06 8.9E-11 74.2 15.4 192 98-315 47-253 (268)
244 3v65_B Low-density lipoprotein 98.5 0.00018 6E-09 67.6 28.0 167 105-291 160-327 (386)
245 3v64_C Agrin; beta propeller, 98.5 0.00032 1.1E-08 64.9 29.2 165 105-290 117-283 (349)
246 3hxj_A Pyrrolo-quinoline quino 98.5 5.2E-06 1.8E-10 76.0 17.0 201 116-362 107-307 (330)
247 3q7m_A Lipoprotein YFGL, BAMB; 98.4 3.4E-05 1.2E-09 72.1 21.8 256 47-347 53-346 (376)
248 2p4o_A Hypothetical protein; p 98.4 7.2E-05 2.5E-09 67.8 23.3 200 103-319 31-234 (306)
249 2fp8_A Strictosidine synthase; 98.4 0.00013 4.6E-09 66.5 25.3 255 36-319 20-305 (322)
250 3p5b_L Low density lipoprotein 98.4 0.00026 9E-09 66.7 26.9 188 81-283 86-278 (400)
251 1ijq_A LDL receptor, low-densi 98.4 0.0012 4E-08 60.1 30.8 167 105-290 78-246 (316)
252 3mbr_X Glutamine cyclotransfer 98.4 3.9E-05 1.3E-09 66.2 18.9 193 98-315 13-222 (243)
253 3nol_A Glutamine cyclotransfer 98.4 9.2E-05 3.1E-09 64.4 20.4 144 115-270 96-244 (262)
254 3sov_A LRP-6, low-density lipo 98.3 0.0013 4.4E-08 59.9 28.2 167 105-291 80-247 (318)
255 3hxj_A Pyrrolo-quinoline quino 98.3 8.3E-05 2.8E-09 67.8 19.6 202 82-320 112-317 (330)
256 3mbr_X Glutamine cyclotransfer 98.2 0.00042 1.4E-08 59.7 22.0 192 39-270 25-223 (243)
257 2p4o_A Hypothetical protein; p 98.2 0.0011 3.6E-08 60.0 26.1 231 36-316 33-277 (306)
258 1kv9_A Type II quinohemoprotei 98.2 5.5E-05 1.9E-09 76.5 19.0 175 154-345 234-495 (668)
259 3p5b_L Low density lipoprotein 98.2 0.0032 1.1E-07 59.3 29.3 168 105-290 160-328 (400)
260 2fp8_A Strictosidine synthase; 98.2 0.00035 1.2E-08 63.7 21.8 182 105-315 20-247 (322)
261 3m0c_C LDL receptor, low-densi 98.2 0.00082 2.8E-08 68.8 26.4 165 104-283 424-590 (791)
262 4a2l_A BT_4663, two-component 98.2 0.0021 7.1E-08 66.5 29.8 256 37-315 175-470 (795)
263 4a2l_A BT_4663, two-component 98.2 0.0015 5.2E-08 67.5 28.7 250 37-313 133-423 (795)
264 3sov_A LRP-6, low-density lipo 98.2 0.00061 2.1E-08 62.0 22.7 161 106-283 37-198 (318)
265 1n7d_A LDL receptor, low-densi 98.2 1.1E-05 3.6E-10 82.0 12.0 165 104-283 406-572 (699)
266 3q7m_A Lipoprotein YFGL, BAMB; 98.1 0.00089 3.1E-08 62.3 24.3 239 47-319 103-370 (376)
267 3nok_A Glutaminyl cyclase; bet 98.1 9E-05 3.1E-09 64.5 15.7 190 152-365 57-250 (268)
268 1k3i_A Galactose oxidase precu 98.1 0.00015 5E-09 73.4 19.4 121 103-227 185-325 (656)
269 3qqz_A Putative uncharacterize 98.1 0.00089 3E-08 58.4 21.6 200 103-317 26-244 (255)
270 1kv9_A Type II quinohemoprotei 98.0 0.00032 1.1E-08 70.9 20.1 184 108-314 234-519 (668)
271 2ad6_A Methanol dehydrogenase 98.0 0.0011 3.7E-08 65.6 22.8 174 155-347 240-503 (571)
272 3m0c_C LDL receptor, low-densi 98.0 0.012 4.1E-07 60.3 30.8 168 104-290 471-640 (791)
273 2ad6_A Methanol dehydrogenase 98.0 0.002 6.7E-08 63.8 24.3 162 127-312 273-522 (571)
274 4a0p_A LRP6, LRP-6, low-densit 98.0 0.006 2E-07 60.9 27.7 162 105-285 38-200 (628)
275 3v9f_A Two-component system se 97.9 0.018 6.2E-07 59.3 30.4 257 32-318 310-603 (781)
276 3v9f_A Two-component system se 97.9 0.0066 2.2E-07 62.6 26.7 194 104-319 363-560 (781)
277 1w6s_A Methanol dehydrogenase 97.8 0.0045 1.5E-07 61.4 23.6 61 271-346 451-511 (599)
278 2xe4_A Oligopeptidase B; hydro 97.8 0.0027 9.4E-08 65.0 22.6 195 69-280 176-398 (751)
279 3tc9_A Hypothetical hydrolase; 97.8 0.0061 2.1E-07 57.9 23.3 134 87-225 159-301 (430)
280 1k3i_A Galactose oxidase precu 97.8 0.0015 5.1E-08 65.9 19.4 256 39-316 190-530 (656)
281 3s94_A LRP-6, low-density lipo 97.8 0.0056 1.9E-07 61.1 22.9 162 105-283 41-203 (619)
282 3sre_A PON1, serum paraoxonase 97.7 0.0039 1.3E-07 57.2 19.8 192 105-317 51-287 (355)
283 4hw6_A Hypothetical protein, I 97.7 0.0034 1.2E-07 59.8 20.1 158 105-281 140-303 (433)
284 3tc9_A Hypothetical hydrolase; 97.7 0.0015 5.2E-08 62.1 17.7 159 105-282 138-301 (430)
285 1flg_A Protein (quinoprotein e 97.7 0.012 4.1E-07 58.2 24.5 62 272-348 465-526 (582)
286 4a0p_A LRP6, LRP-6, low-densit 97.7 0.05 1.7E-06 54.3 29.3 163 105-289 81-244 (628)
287 4hw6_A Hypothetical protein, I 97.7 0.014 4.8E-07 55.4 23.3 207 69-280 141-372 (433)
288 2p9w_A MAL S 1 allergenic prot 97.7 0.0025 8.6E-08 57.4 16.8 160 105-282 14-215 (334)
289 2xzh_A Clathrin heavy chain 1; 97.6 0.028 9.6E-07 50.2 22.8 206 72-291 72-299 (365)
290 2xe4_A Oligopeptidase B; hydro 97.6 0.0058 2E-07 62.6 21.2 161 105-282 175-354 (751)
291 3s94_A LRP-6, low-density lipo 97.6 0.019 6.7E-07 57.1 23.7 162 105-287 85-248 (619)
292 3kya_A Putative phosphatase; s 97.5 0.036 1.2E-06 53.1 24.0 118 105-225 187-341 (496)
293 1n7d_A LDL receptor, low-densi 97.5 0.0004 1.4E-08 70.5 10.6 166 105-289 454-621 (699)
294 1bpo_A Protein (clathrin); cla 97.4 0.092 3.1E-06 48.9 25.0 205 72-290 71-297 (494)
295 3qqz_A Putative uncharacterize 97.4 0.063 2.2E-06 46.7 27.2 158 106-280 72-251 (255)
296 3kya_A Putative phosphatase; s 97.3 0.0027 9.3E-08 60.9 13.2 171 105-281 140-340 (496)
297 3fia_A Intersectin-1; EH 1 dom 97.3 0.00025 8.6E-09 53.6 4.2 54 366-426 22-75 (121)
298 2xbg_A YCF48-like protein; pho 97.2 0.13 4.5E-06 46.6 23.9 186 105-316 81-269 (327)
299 3sre_A PON1, serum paraoxonase 97.1 0.066 2.2E-06 49.1 20.0 192 105-314 113-331 (355)
300 2p9w_A MAL S 1 allergenic prot 97.1 0.026 8.8E-07 50.8 16.0 157 149-320 12-208 (334)
301 3amr_A 3-phytase; beta-propell 97.0 0.18 6E-06 45.8 22.5 154 125-291 98-273 (355)
302 2xbg_A YCF48-like protein; pho 97.0 0.18 6.2E-06 45.7 28.0 192 104-320 122-315 (327)
303 1flg_A Protein (quinoprotein e 97.0 0.027 9.3E-07 55.7 17.5 52 261-315 496-548 (582)
304 1w6s_A Methanol dehydrogenase 96.9 0.017 5.8E-07 57.2 14.4 206 117-342 63-346 (599)
305 2xzh_A Clathrin heavy chain 1; 96.9 0.24 8.2E-06 44.3 21.0 231 88-353 50-305 (365)
306 3pbp_A Nucleoporin NUP82; beta 96.7 0.36 1.2E-05 44.9 20.7 154 115-279 31-209 (452)
307 3amr_A 3-phytase; beta-propell 96.7 0.11 3.7E-06 47.2 16.8 151 116-281 40-209 (355)
308 2ism_A Putative oxidoreductase 96.4 0.54 1.8E-05 43.0 22.4 206 104-315 75-333 (352)
309 1bpo_A Protein (clathrin); cla 96.2 0.79 2.7E-05 42.8 24.2 230 88-352 49-303 (494)
310 2ism_A Putative oxidoreductase 96.2 0.24 8.1E-06 45.4 16.6 119 150-282 31-178 (352)
311 1tl2_A L10, protein (tachylect 96.1 0.14 4.9E-06 43.0 13.3 105 105-219 42-157 (236)
312 1xi4_A Clathrin heavy chain; a 96.0 0.44 1.5E-05 51.2 19.2 207 73-290 72-297 (1630)
313 1tl2_A L10, protein (tachylect 95.6 0.35 1.2E-05 40.7 13.5 148 115-281 3-162 (236)
314 3pbp_A Nucleoporin NUP82; beta 95.6 0.64 2.2E-05 43.3 16.3 117 58-177 53-208 (452)
315 3ei3_A DNA damage-binding prot 95.5 0.94 3.2E-05 48.5 20.0 222 79-324 707-996 (1158)
316 1cru_A Protein (soluble quinop 95.4 1.5 5.1E-05 41.6 19.3 112 149-270 26-162 (454)
317 3a9g_A Putative uncharacterize 95.4 1.6 5.4E-05 39.9 21.1 203 105-315 74-330 (354)
318 2vpj_A Kelch-like protein 12; 95.3 0.9 3.1E-05 40.1 16.7 195 115-339 62-279 (301)
319 2qpt_A EH domain-containing pr 95.1 0.0083 2.8E-07 58.7 2.6 52 368-427 450-501 (550)
320 3das_A Putative oxidoreductase 95.1 1.8 6.1E-05 39.4 17.7 158 149-314 31-219 (347)
321 2g8s_A Glucose/sorbosone dehyd 95.0 2 7E-05 39.1 20.9 69 244-314 265-340 (353)
322 1xi4_A Clathrin heavy chain; a 95.0 0.83 2.8E-05 49.2 17.0 231 88-353 49-304 (1630)
323 3a9g_A Putative uncharacterize 94.9 0.97 3.3E-05 41.3 15.8 152 150-315 29-216 (354)
324 1cru_A Protein (soluble quinop 94.5 2.9 9.9E-05 39.6 18.6 105 105-213 28-162 (454)
325 2g8s_A Glucose/sorbosone dehyd 94.5 0.97 3.3E-05 41.3 14.7 148 151-313 19-214 (353)
326 3ii7_A Kelch-like protein 7; p 94.4 0.89 3E-05 40.3 14.0 194 115-339 55-273 (306)
327 2xn4_A Kelch-like protein 2; s 94.1 0.42 1.4E-05 42.4 11.2 194 115-339 61-277 (302)
328 1zgk_A Kelch-like ECH-associat 94.0 1.2 4E-05 39.6 14.0 194 115-339 70-288 (308)
329 2vpj_A Kelch-like protein 12; 93.5 1.1 3.6E-05 39.7 12.7 194 115-339 14-232 (301)
330 1eh2_A EPS15; calcium binding, 92.7 0.14 4.6E-06 37.8 4.5 51 368-425 6-56 (106)
331 3sbq_A Nitrous-oxide reductase 91.6 0.2 6.8E-06 48.2 5.2 119 194-315 323-453 (638)
332 2xn4_A Kelch-like protein 2; s 91.4 6.9 0.00023 34.3 17.2 106 115-227 108-231 (302)
333 3ii7_A Kelch-like protein 7; p 91.4 2.2 7.5E-05 37.7 11.9 105 116-227 12-129 (306)
334 3s25_A Hypothetical 7-bladed b 91.3 1.7 5.7E-05 38.7 10.9 128 155-314 109-240 (302)
335 2zwa_A Leucine carboxyl methyl 91.3 8.4 0.00029 38.7 17.2 156 115-284 397-579 (695)
336 3s25_A Hypothetical 7-bladed b 91.2 3.7 0.00013 36.4 13.0 129 155-315 58-202 (302)
337 2woz_A Kelch repeat and BTB do 90.9 8.2 0.00028 34.2 17.0 133 163-317 111-263 (318)
338 4asc_A Kelch repeat and BTB do 90.7 8.3 0.00028 34.1 15.2 104 163-284 100-223 (315)
339 2be1_A Serine/threonine-protei 89.5 1.6 5.4E-05 39.5 9.0 111 116-231 10-136 (339)
340 4asc_A Kelch repeat and BTB do 87.7 4.5 0.00015 35.8 11.1 189 118-339 7-222 (315)
341 1fi6_A EH domain protein REPS1 87.5 0.59 2E-05 33.1 4.0 51 369-425 1-51 (92)
342 1zgk_A Kelch-like ECH-associat 87.0 14 0.00046 32.5 13.8 106 115-227 121-242 (308)
343 2uvk_A YJHT; unknown function, 86.4 2.4 8.3E-05 38.4 8.6 61 274-342 286-346 (357)
344 1c07_A Protein (epidermal grow 86.4 0.63 2.1E-05 33.2 3.6 51 369-425 2-52 (95)
345 3das_A Putative oxidoreductase 85.9 20 0.00067 32.4 26.8 251 36-315 33-326 (347)
346 2woz_A Kelch repeat and BTB do 85.7 6.9 0.00023 34.7 11.1 145 117-284 17-186 (318)
347 2jq6_A EH domain-containing pr 85.6 0.65 2.2E-05 35.9 3.5 51 367-425 42-92 (139)
348 2wg3_C Hedgehog-interacting pr 84.8 17 0.00059 34.4 13.7 115 151-271 15-158 (463)
349 3sbq_A Nitrous-oxide reductase 83.3 4.4 0.00015 39.1 8.7 74 151-225 324-408 (638)
350 2wg3_C Hedgehog-interacting pr 83.0 29 0.001 32.8 14.5 109 105-214 15-158 (463)
351 2uvk_A YJHT; unknown function, 82.6 27 0.00091 31.3 13.9 30 261-291 316-351 (357)
352 1iq3_A Ralbp1-interacting prot 82.0 0.5 1.7E-05 34.9 1.4 61 359-425 4-64 (110)
353 3q6k_A 43.2 kDa salivary prote 80.3 35 0.0012 31.2 15.2 153 173-338 124-306 (381)
354 3zwu_A Alkaline phosphatase PH 73.6 70 0.0024 31.2 14.5 59 151-211 477-548 (592)
355 2be1_A Serine/threonine-protei 73.5 10 0.00035 34.2 7.7 114 164-291 12-139 (339)
356 2zwa_A Leucine carboxyl methyl 72.3 83 0.0028 31.4 17.7 68 115-183 500-579 (695)
357 2kgr_A Intersectin-1; structur 69.9 5.6 0.00019 29.1 4.4 52 368-425 5-56 (111)
358 4gq2_M Nucleoporin NUP120; bet 69.2 18 0.00061 37.9 9.5 38 252-290 237-274 (950)
359 3b7f_A Glycosyl hydrolase, BNR 63.5 87 0.003 28.4 16.3 72 104-177 55-143 (394)
360 4a9v_A PHOX; hydrolase, beta-p 62.2 1.2E+02 0.004 29.5 15.1 61 150-212 476-549 (592)
361 3ott_A Two-component system se 58.8 1.5E+02 0.0052 29.7 26.0 181 105-314 64-249 (758)
362 3qhy_B Beta-lactamase inhibito 56.9 96 0.0033 26.8 20.4 167 85-285 79-249 (282)
363 3ei3_A DNA damage-binding prot 56.6 2.1E+02 0.0072 30.6 29.7 92 85-180 530-635 (1158)
364 4gq2_M Nucleoporin NUP120; bet 56.4 52 0.0018 34.4 10.1 36 195-231 237-272 (950)
365 1qjt_A EH1, epidermal growth f 53.4 4.7 0.00016 28.8 1.3 42 378-425 12-53 (99)
366 1sqj_A OXG-RCBH, oligoxylogluc 52.7 2E+02 0.0068 29.2 16.8 113 104-217 15-144 (789)
367 3b7f_A Glycosyl hydrolase, BNR 50.9 1.4E+02 0.0048 26.9 15.8 54 116-172 22-77 (394)
368 3qhy_B Beta-lactamase inhibito 49.4 1.3E+02 0.0044 25.9 22.3 147 104-285 63-210 (282)
369 2cn3_A Xyloglucanase, beta-1,4 49.3 2.2E+02 0.0074 28.6 17.5 108 105-213 24-151 (737)
370 4fhn_B Nucleoporin NUP120; pro 47.0 34 0.0012 36.6 7.1 39 252-291 239-277 (1139)
371 3kci_A Probable E3 ubiquitin-p 42.5 1.9E+02 0.0066 26.1 19.0 160 115-281 61-240 (389)
372 3f7f_A Nucleoporin NUP120; nuc 41.7 61 0.0021 32.4 7.3 34 195-231 223-256 (729)
373 4fhn_B Nucleoporin NUP120; pro 36.9 66 0.0023 34.4 7.4 33 151-184 239-271 (1139)
374 3q6k_A 43.2 kDa salivary prote 33.4 2.8E+02 0.0095 25.2 23.7 157 150-315 152-342 (381)
375 3f7f_A Nucleoporin NUP120; nuc 29.8 66 0.0023 32.1 5.4 38 251-291 222-259 (729)
376 3zwu_A Alkaline phosphatase PH 23.8 2.1E+02 0.007 27.9 7.7 57 107-167 479-548 (592)
No 1
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=9.8e-41 Score=312.84 Aligned_cols=270 Identities=14% Similarity=0.119 Sum_probs=224.6
Q ss_pred ceeEEEEeeCCCcceEEEeeccCceEeeecC----------------------CCceeEEEecCCCCeEEEecCceEEEE
Q psy4571 35 YRFYRLCVAEPFDDAVEERVINEEYKIWKKN----------------------TPFLYDLVVNNYVANISCILNISILFF 92 (437)
Q Consensus 35 ~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~----------------------~~~~~~~~~~~~~~~i~~~~~~~i~~~ 92 (437)
-.|.+++|+ |++.+|++++ |+++|+|+.. ...+.++.|+++...++++.|+.|++|
T Consensus 31 ~~v~~~~fs-~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~l~~~s~dg~v~lW 108 (344)
T 4gqb_B 31 RQLEAARYR-SDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGERGILVASDSGAVELW 108 (344)
T ss_dssp SEEEEEEEC-TTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTTEEEEEETTSEEEEE
T ss_pred CCEEEEEEC-CCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCCeEEEEECCCEEEEE
Confidence 358999999 9999999888 8889999721 134788999998888899999999999
Q ss_pred Eeeecccc--------ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcE
Q psy4571 93 EIIFTQNF--------PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYI 164 (437)
Q Consensus 93 ~~~~~~~~--------~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~ 164 (437)
|+..++.. .|...|++++|+| ++.+|++|+.||+|++||+. ..+.+..+.+|.+.|.+++|+|++..+
T Consensus 109 d~~~~~~~~~~~~~~~~H~~~V~~v~~sp-dg~~l~sgs~d~~i~iwd~~---~~~~~~~~~~h~~~V~~~~~~~~~~~~ 184 (344)
T 4gqb_B 109 ELDENETLIVSKFCKYEHDDIVSTVSVLS-SGTQAVSGSKDICIKVWDLA---QQVVLSSYRAHAAQVTCVAASPHKDSV 184 (344)
T ss_dssp EECTTSSCEEEEEEEECCSSCEEEEEECT-TSSEEEEEETTSCEEEEETT---TTEEEEEECCCSSCEEEEEECSSCTTE
T ss_pred eccCCCceeEeeccccCCCCCEEEEEECC-CCCEEEEEeCCCeEEEEECC---CCcEEEEEcCcCCceEEEEecCCCCCc
Confidence 98765432 3677999999999 68999999999999999998 567888999999999999999999877
Q ss_pred EEEEeCCCeEEEEeCCCCceeeeEe--ccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCce
Q psy4571 165 LATGSADKTVALWDLRNLKLKLHSF--ESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPEL 242 (437)
Q Consensus 165 l~sgs~dg~i~lwd~~~~~~~~~~~--~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~ 242 (437)
|++|+.|++|++||+++++. ...+ ..|...+.+++|+|++..++++|+.||.|++||+++++.
T Consensus 185 l~s~s~D~~v~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~-------------- 249 (344)
T 4gqb_B 185 FLSCSEDNRILLWDTRCPKP-ASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSC-------------- 249 (344)
T ss_dssp EEEEETTSCEEEEETTSSSC-EEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--C--------------
T ss_pred eeeeccccccccccccccce-eeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcE--------------
Confidence 99999999999999998665 4444 345667999999998777899999999999999988643
Q ss_pred EEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCc-ccccCCCCccc
Q psy4571 243 LFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASS-TASESPTPTNS 321 (437)
Q Consensus 243 ~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~-l~s~s~d~~~~ 321 (437)
+..+.+|...|++++|+|++..+|++|+.|++|++||+++++... + ..|...+..++|+|++.. +++++.|++
T Consensus 250 ~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~-~---~~H~~~V~~v~~sp~~~~llas~s~D~~-- 323 (344)
T 4gqb_B 250 VLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFR-S---QAHRDFVRDATWSPLNHSLLTTVGWDHQ-- 323 (344)
T ss_dssp CEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEE-E---CCCSSCEEEEEECSSSTTEEEEEETTSC--
T ss_pred EEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEE-E---cCCCCCEEEEEEeCCCCeEEEEEcCCCe--
Confidence 455889999999999999986689999999999999999875432 2 236667888899999975 678999999
Q ss_pred ccccccccccccccchhhh
Q psy4571 322 VHEKNYWQGLVLFDILVCE 340 (437)
Q Consensus 322 ~~~~~~~~~i~~wd~~~~~ 340 (437)
|++|++.+..
T Consensus 324 ---------v~~w~v~~~~ 333 (344)
T 4gqb_B 324 ---------VVHHVVPTEP 333 (344)
T ss_dssp ---------EEEEECCC--
T ss_pred ---------EEEEECCCCC
Confidence 8899987654
No 2
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=2.3e-40 Score=312.44 Aligned_cols=278 Identities=13% Similarity=0.138 Sum_probs=225.3
Q ss_pred cceeEEEEeeCCCcceEEEeec------cCceEeeec---------------CCCceeEEEecCCCCeEEEecCceEEEE
Q psy4571 34 IYRFYRLCVAEPFDDAVEERVI------NEEYKIWKK---------------NTPFLYDLVVNNYVANISCILNISILFF 92 (437)
Q Consensus 34 ~~~v~~~~~~~~~~~~l~tgs~------d~~v~iw~~---------------~~~~~~~~~~~~~~~~i~~~~~~~i~~~ 92 (437)
.-.|.+++|+ |++++|++||. |+.+++|+. +...+.++.|++....++++.+++|++|
T Consensus 42 ~~~V~~v~fS-pDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~l~~s~dg~v~lW 120 (357)
T 4g56_B 42 EVQIGAVRYR-RDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKGILVASDSGAVELW 120 (357)
T ss_dssp CSEEEEEEEC-SSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTEEEEEETTSCEEEC
T ss_pred cCCEEEEEEC-CCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCCEEEEECCCEEEEe
Confidence 4569999999 99999999998 667888873 2345788999999888899999999999
Q ss_pred Eeeecccc--------ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcE
Q psy4571 93 EIIFTQNF--------PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYI 164 (437)
Q Consensus 93 ~~~~~~~~--------~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~ 164 (437)
|+..++.. .+...|.+++|+| ++.+|++|+.||.|++||+. ..+.+..+.+|...|.+++|+|++..+
T Consensus 121 d~~~~~~~~~~~~~~~~h~~~V~~v~~sp-dg~~l~sgs~dg~v~iwd~~---~~~~~~~~~~h~~~v~~v~~s~~~~~~ 196 (357)
T 4g56_B 121 EILEKESLLVNKFAKYEHDDIVKTLSVFS-DGTQAVSGGKDFSVKVWDLS---QKAVLKSYNAHSSEVNCVAACPGKDTI 196 (357)
T ss_dssp --------CCCCEEECCCSSCEEEEEECS-SSSEEEEEETTSCEEEEETT---TTEEEEEECCCSSCEEEEEECTTCSSC
T ss_pred eccccceeEEEeeccCCCCCCEEEEEECC-CCCEEEEEeCCCeEEEEECC---CCcEEEEEcCCCCCEEEEEEccCCCce
Confidence 97655422 3567899999999 68899999999999999998 567788899999999999999998767
Q ss_pred EEEEeCCCeEEEEeCCCCceee-eEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceE
Q psy4571 165 LATGSADKTVALWDLRNLKLKL-HSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELL 243 (437)
Q Consensus 165 l~sgs~dg~i~lwd~~~~~~~~-~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~ 243 (437)
+++++.||+|++||+++++... .....|...+.+++|+|++..+|++|+.|+.|++||+++++. +
T Consensus 197 ~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~--------------~ 262 (357)
T 4g56_B 197 FLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDS--------------A 262 (357)
T ss_dssp EEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGG--------------C
T ss_pred eeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcE--------------e
Confidence 9999999999999999866422 223457788999999999777899999999999999987643 4
Q ss_pred EEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecC-CCCcccccCCCCcccc
Q psy4571 244 FIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASP-TASSTASESPTPTNSV 322 (437)
Q Consensus 244 ~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~-~g~~l~s~s~d~~~~~ 322 (437)
..+.+|...|++++|+|++..+|++|+.|++|++||+++++....+ .|...+..++|+| ++.+|++++.|++
T Consensus 263 ~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~----~H~~~V~~vafsP~d~~~l~s~s~Dg~--- 335 (357)
T 4g56_B 263 QTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL----SHRDFVTGVAWSPLDHSKFTTVGWDHK--- 335 (357)
T ss_dssp EEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC----CCSSCEEEEEECSSSTTEEEEEETTSC---
T ss_pred EEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC----CCCCCEEEEEEeCCCCCEEEEEcCCCe---
Confidence 5578999999999999998768999999999999999988655433 2566778889998 8999999999999
Q ss_pred cccccccccccccchhhhhhhhh
Q psy4571 323 HEKNYWQGLVLFDILVCEEQRQL 345 (437)
Q Consensus 323 ~~~~~~~~i~~wd~~~~~~~~~~ 345 (437)
|++||+.+......+
T Consensus 336 --------v~iW~~~~~~~~~~~ 350 (357)
T 4g56_B 336 --------VLHHHLPSEGRTENL 350 (357)
T ss_dssp --------EEEEECC--------
T ss_pred --------EEEEECCCCCccccc
Confidence 899998765444333
No 3
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=7.5e-40 Score=302.01 Aligned_cols=273 Identities=18% Similarity=0.247 Sum_probs=232.5
Q ss_pred ccccceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEE
Q psy4571 31 SHSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVA 110 (437)
Q Consensus 31 ~~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~ 110 (437)
.-+...|.+++|+ |+++++++|+.|++|++|+..++....... .+..+|.+++
T Consensus 10 ~~h~~~V~~~~fs-p~~~~l~s~~~dg~v~lWd~~~~~~~~~~~--------------------------~~~~~v~~~~ 62 (304)
T 2ynn_A 10 SNRSDRVKGIDFH-PTEPWVLTTLYSGRVELWNYETQVEVRSIQ--------------------------VTETPVRAGK 62 (304)
T ss_dssp EEECSCEEEEEEC-SSSSEEEEEETTSEEEEEETTTTEEEEEEE--------------------------CCSSCEEEEE
T ss_pred cCCCCceEEEEEC-CCCCEEEEEcCCCcEEEEECCCCceeEEee--------------------------ccCCcEEEEE
Confidence 3445679999999 999999999999999999988765433211 1335688999
Q ss_pred eeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEec
Q psy4571 111 WHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFE 190 (437)
Q Consensus 111 ~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~ 190 (437)
|+| ++++|++|+.|++|++||+. ..+.+..+.+|.+.|.+++|+|++.. |++|+.||+|++||++++......+.
T Consensus 63 ~~~-~~~~l~s~s~d~~i~vwd~~---~~~~~~~~~~h~~~v~~~~~~~~~~~-l~sgs~D~~v~lWd~~~~~~~~~~~~ 137 (304)
T 2ynn_A 63 FIA-RKNWIIVGSDDFRIRVFNYN---TGEKVVDFEAHPDYIRSIAVHPTKPY-VLSGSDDLTVKLWNWENNWALEQTFE 137 (304)
T ss_dssp EEG-GGTEEEEEETTSEEEEEETT---TCCEEEEEECCSSCEEEEEECSSSSE-EEEEETTSCEEEEEGGGTTEEEEEEC
T ss_pred EeC-CCCEEEEECCCCEEEEEECC---CCcEEEEEeCCCCcEEEEEEcCCCCE-EEEECCCCeEEEEECCCCcchhhhhc
Confidence 999 68899999999999999998 56778889999999999999999995 99999999999999998766567888
Q ss_pred cCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEcc--CCCeEEEE
Q psy4571 191 SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNP--NEPWVICS 268 (437)
Q Consensus 191 ~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p--~~~~~l~s 268 (437)
+|...|.+++|+|.+..+|++|+.|++|++||++..... .....+|...+..+.|+| +++ ++++
T Consensus 138 ~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~-------------~~~~~~~~~~v~~~~~~~~~~~~-~l~s 203 (304)
T 2ynn_A 138 GHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPN-------------FTLTTGQERGVNYVDYYPLPDKP-YMIT 203 (304)
T ss_dssp CCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCS-------------EEEECCCTTCEEEEEECCSTTCC-EEEE
T ss_pred ccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCcc-------------ceeccCCcCcEEEEEEEEcCCCC-EEEE
Confidence 999999999999954447999999999999999775432 222446777899999987 556 8899
Q ss_pred EeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCC
Q psy4571 269 VSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGT 348 (437)
Q Consensus 269 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h 348 (437)
|+.|+.|++||+++++++..+.. |...+..++|+|++.++++|+.|++ |++||..+++..+.+.+|
T Consensus 204 ~s~D~~i~iWd~~~~~~~~~~~~---h~~~v~~~~~~p~~~~l~s~s~Dg~-----------i~iWd~~~~~~~~~~~~~ 269 (304)
T 2ynn_A 204 ASDDLTIKIWDYQTKSCVATLEG---HMSNVSFAVFHPTLPIIISGSEDGT-----------LKIWNSSTYKVEKTLNVG 269 (304)
T ss_dssp EETTSEEEEEETTTTEEEEEEEC---CSSCEEEEEECSSSSEEEEEETTSC-----------EEEEETTTCCEEEEECCS
T ss_pred EcCCCeEEEEeCCCCccceeeCC---CCCCEEEEEECCCCCEEEEEcCCCe-----------EEEEECCCCceeeeccCC
Confidence 99999999999999887776654 5566777899999999999999999 899999999999999999
Q ss_pred CccccccCCCCCCcc
Q psy4571 349 EEESSDRHSSDNDTE 363 (437)
Q Consensus 349 ~~~~~~~~~~~~~~~ 363 (437)
.+.+.++.++|++..
T Consensus 270 ~~~~~~~~~~~~~~~ 284 (304)
T 2ynn_A 270 LERSWCIATHPTGRK 284 (304)
T ss_dssp SSSEEEEEECTTCGG
T ss_pred CccEEEEEECCCCCc
Confidence 999999998887753
No 4
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.9e-39 Score=300.36 Aligned_cols=271 Identities=16% Similarity=0.266 Sum_probs=228.8
Q ss_pred ccccceeEEEEeeC---CCcceEEEeeccCceEeeecC-------------CCceeEEEecCCCCeE-EEecCceEEEEE
Q psy4571 31 SHSIYRFYRLCVAE---PFDDAVEERVINEEYKIWKKN-------------TPFLYDLVVNNYVANI-SCILNISILFFE 93 (437)
Q Consensus 31 ~~~~~~v~~~~~~~---~~~~~l~tgs~d~~v~iw~~~-------------~~~~~~~~~~~~~~~i-~~~~~~~i~~~~ 93 (437)
.-+.-.|.+++|++ +++++|+||+.|++||+|+.. ...+..+.+.+....+ +++.|+.|++||
T Consensus 29 ~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd 108 (321)
T 3ow8_A 29 QAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWD 108 (321)
T ss_dssp TSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEE
T ss_pred ccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEE
Confidence 44667899999983 246799999999999999843 3446666676666655 677899999999
Q ss_pred eeecccc----ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEe
Q psy4571 94 IIFTQNF----PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGS 169 (437)
Q Consensus 94 ~~~~~~~----~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs 169 (437)
+..++.. ..+..+.+++|+| ++.+|++|+.||.|++||++ ..+....+..|...|.+++|+|++++ |++|+
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~~g~~dg~v~i~~~~---~~~~~~~~~~~~~~v~~~~~spdg~~-lasg~ 183 (321)
T 3ow8_A 109 LENGKQIKSIDAGPVDAWTLAFSP-DSQYLATGTHVGKVNIFGVE---SGKKEYSLDTRGKFILSIAYSPDGKY-LASGA 183 (321)
T ss_dssp TTTTEEEEEEECCTTCCCCEEECT-TSSEEEEECTTSEEEEEETT---TCSEEEEEECSSSCEEEEEECTTSSE-EEEEE
T ss_pred CCCCCEEEEEeCCCccEEEEEECC-CCCEEEEEcCCCcEEEEEcC---CCceeEEecCCCceEEEEEECCCCCE-EEEEc
Confidence 8655432 2456789999999 68899999999999999998 45667778889999999999999995 99999
Q ss_pred CCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCc
Q psy4571 170 ADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGH 249 (437)
Q Consensus 170 ~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h 249 (437)
.||.|++||+++++. +..+.+|..+|.+++|+|+++ +|++|+.|+.|++||++... .+..+.+|
T Consensus 184 ~dg~i~iwd~~~~~~-~~~~~~h~~~v~~l~~spd~~-~l~s~s~dg~i~iwd~~~~~--------------~~~~~~~h 247 (321)
T 3ow8_A 184 IDGIINIFDIATGKL-LHTLEGHAMPIRSLTFSPDSQ-LLVTASDDGYIKIYDVQHAN--------------LAGTLSGH 247 (321)
T ss_dssp TTSCEEEEETTTTEE-EEEECCCSSCCCEEEECTTSC-EEEEECTTSCEEEEETTTCC--------------EEEEECCC
T ss_pred CCCeEEEEECCCCcE-EEEEcccCCceeEEEEcCCCC-EEEEEcCCCeEEEEECCCcc--------------eeEEEcCC
Confidence 999999999998655 788899999999999999998 59999999999999998753 34568899
Q ss_pred cccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCccccccccccc
Q psy4571 250 TAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQ 329 (437)
Q Consensus 250 ~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~ 329 (437)
...|.+++|+|+++ +|++++.|+.|++||+++++++..+.. +...+..++|+|+|..|++++.|+.
T Consensus 248 ~~~v~~~~~sp~~~-~l~s~s~D~~v~iwd~~~~~~~~~~~~---h~~~v~~v~~s~~g~~l~s~~~d~~---------- 313 (321)
T 3ow8_A 248 ASWVLNVAFCPDDT-HFVSSSSDKSVKVWDVGTRTCVHTFFD---HQDQVWGVKYNGNGSKIVSVGDDQE---------- 313 (321)
T ss_dssp SSCEEEEEECTTSS-EEEEEETTSCEEEEETTTTEEEEEECC---CSSCEEEEEECTTSSEEEEEETTCC----------
T ss_pred CCceEEEEECCCCC-EEEEEeCCCcEEEEeCCCCEEEEEEcC---CCCcEEEEEECCCCCEEEEEeCCCe----------
Confidence 99999999999999 788999999999999999887776643 5567788899999999999999999
Q ss_pred ccccccch
Q psy4571 330 GLVLFDIL 337 (437)
Q Consensus 330 ~i~~wd~~ 337 (437)
|++||..
T Consensus 314 -i~vwd~p 320 (321)
T 3ow8_A 314 -IHIYDCP 320 (321)
T ss_dssp -EEEEECC
T ss_pred -EEEEeCC
Confidence 7888753
No 5
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=5.6e-39 Score=308.74 Aligned_cols=267 Identities=17% Similarity=0.250 Sum_probs=233.2
Q ss_pred ccceeEEEEeeCCCcceEEEeeccCceEeeec-----------CCCceeEEEecCCCCeE-EEecCceEEEEEeeecccc
Q psy4571 33 SIYRFYRLCVAEPFDDAVEERVINEEYKIWKK-----------NTPFLYDLVVNNYVANI-SCILNISILFFEIIFTQNF 100 (437)
Q Consensus 33 ~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~-----------~~~~~~~~~~~~~~~~i-~~~~~~~i~~~~~~~~~~~ 100 (437)
+.-.|.+++|+ |++.++++|+.|++|++|+. |.+.+..+.|++.+..+ +++.|++|++||+...+..
T Consensus 107 h~~~V~~~~~~-p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~ 185 (410)
T 1vyh_C 107 HRSPVTRVIFH-PVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECI 185 (410)
T ss_dssp CSSCEEEEEEC-SSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEE
T ss_pred cCCcEEEEEEc-CCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCcee
Confidence 45679999999 99999999999999999994 44667888888887766 7788999999997654432
Q ss_pred ----ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEE
Q psy4571 101 ----PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVAL 176 (437)
Q Consensus 101 ----~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~l 176 (437)
.+...|.+++|+| ++.+|++|+.|++|++||+. ....+..+.+|...|.+++|+|++. +|++|+.|++|++
T Consensus 186 ~~~~~h~~~V~~v~~~p-~~~~l~s~s~D~~i~~wd~~---~~~~~~~~~~h~~~v~~~~~~~~g~-~l~s~s~D~~v~v 260 (410)
T 1vyh_C 186 RTMHGHDHNVSSVSIMP-NGDHIVSASRDKTIKMWEVQ---TGYCVKTFTGHREWVRMVRPNQDGT-LIASCSNDQTVRV 260 (410)
T ss_dssp ECCCCCSSCEEEEEECS-SSSEEEEEETTSEEEEEETT---TCCEEEEEECCSSCEEEEEECTTSS-EEEEEETTSCEEE
T ss_pred EEEcCCCCCEEEEEEeC-CCCEEEEEeCCCeEEEEECC---CCcEEEEEeCCCccEEEEEECCCCC-EEEEEcCCCeEEE
Confidence 3567899999999 68899999999999999998 5677888999999999999999999 5999999999999
Q ss_pred EeCCCCceeeeEeccCCCceEEEEEcCC--------------------CCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCC
Q psy4571 177 WDLRNLKLKLHSFESHKDEIFQVQWSPH--------------------NETILASSGTDRRLHVWDLSKIGEEQSTEDAE 236 (437)
Q Consensus 177 wd~~~~~~~~~~~~~h~~~v~~v~~~p~--------------------~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~ 236 (437)
||+++++. ...+.+|...|.+++|+|+ ++ +|++|+.|+.|++||++++
T Consensus 261 wd~~~~~~-~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~l~sgs~D~~i~iwd~~~~---------- 328 (410)
T 1vyh_C 261 WVVATKEC-KAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGP-FLLSGSRDKTIKMWDVSTG---------- 328 (410)
T ss_dssp EETTTCCE-EEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CC-EEEEEETTSEEEEEETTTT----------
T ss_pred EECCCCce-eeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCC-EEEEEeCCCeEEEEECCCC----------
Confidence 99998655 7788899999999999996 44 6999999999999999875
Q ss_pred CCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCC
Q psy4571 237 DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESP 316 (437)
Q Consensus 237 ~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~ 316 (437)
.++..+.+|...|++++|+|+++ +|++|+.|+.|++||+.+++++..+.. |...+..++|+|++.++++|+.
T Consensus 329 ----~~~~~~~~h~~~v~~v~~~~~g~-~l~s~s~D~~i~vwd~~~~~~~~~~~~---h~~~v~~l~~~~~~~~l~sgs~ 400 (410)
T 1vyh_C 329 ----MCLMTLVGHDNWVRGVLFHSGGK-FILSCADDKTLRVWDYKNKRCMKTLNA---HEHFVTSLDFHKTAPYVVTGSV 400 (410)
T ss_dssp ----EEEEEEECCSSCEEEEEECSSSS-CEEEEETTTEEEEECCTTSCCCEEEEC---CSSCEEEEEECSSSSCEEEEET
T ss_pred ----ceEEEEECCCCcEEEEEEcCCCC-EEEEEeCCCeEEEEECCCCceEEEEcC---CCCcEEEEEEcCCCCEEEEEeC
Confidence 34566889999999999999999 788999999999999999988877754 5567888899999999999999
Q ss_pred CCcccccccccccccccccc
Q psy4571 317 TPTNSVHEKNYWQGLVLFDI 336 (437)
Q Consensus 317 d~~~~~~~~~~~~~i~~wd~ 336 (437)
|++ |++||.
T Consensus 401 D~~-----------i~vW~~ 409 (410)
T 1vyh_C 401 DQT-----------VKVWEC 409 (410)
T ss_dssp TSE-----------EEEEC-
T ss_pred CCc-----------EEEEeC
Confidence 999 777775
No 6
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=3.5e-39 Score=302.36 Aligned_cols=279 Identities=16% Similarity=0.214 Sum_probs=235.6
Q ss_pred cccccceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceE
Q psy4571 30 LSHSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDV 109 (437)
Q Consensus 30 ~~~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~ 109 (437)
+.-+.-.|.+++|+ |+++++++|+.|++|++|+..++....... .+...|.++
T Consensus 51 l~gH~~~v~~~~~s-~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~--------------------------~~~~~v~~~ 103 (340)
T 1got_B 51 LRGHLAKIYAMHWG-TDSRLLLSASQDGKLIIWDSYTTNKVHAIP--------------------------LRSSWVMTC 103 (340)
T ss_dssp ECCCSSCEEEEEEC-TTSSEEEEEETTTEEEEEETTTCCEEEEEE--------------------------CSSSCEEEE
T ss_pred ecCCCCceEEEEEC-CCCCEEEEEeCCCcEEEEECCCCCcceEee--------------------------cCCccEEEE
Confidence 33456679999999 999999999999999999987665433221 123567899
Q ss_pred EeeCCCCCEEEEEECCCcEEEEEcCCCCC-CCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeE
Q psy4571 110 AWHLLHESLFGSVADDQKLMIWDTRSHNV-SKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHS 188 (437)
Q Consensus 110 ~~sp~~~~~l~~~~~dg~v~vwd~~~~~~-~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~ 188 (437)
+|+| ++.+|++|+.|+.|++|++.+... ......+.+|.+.|.++.|++++. +++++.|++|++||+++++. +..
T Consensus 104 ~~s~-~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~--l~s~s~d~~i~~wd~~~~~~-~~~ 179 (340)
T 1got_B 104 AYAP-SGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ--IVTSSGDTTCALWDIETGQQ-TTT 179 (340)
T ss_dssp EECT-TSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTE--EEEEETTSCEEEEETTTTEE-EEE
T ss_pred EECC-CCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCc--EEEEECCCcEEEEECCCCcE-EEE
Confidence 9999 688999999999999999985421 234566789999999999999875 89999999999999998665 788
Q ss_pred eccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEE
Q psy4571 189 FESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICS 268 (437)
Q Consensus 189 ~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s 268 (437)
+.+|.+.|.+++|+|+++ ++++|+.|+.|++||++++. .+..+.+|...|++++|+|+++ ++++
T Consensus 180 ~~~h~~~v~~~~~~~~~~-~l~sg~~d~~v~~wd~~~~~--------------~~~~~~~h~~~v~~v~~~p~~~-~l~s 243 (340)
T 1got_B 180 FTGHTGDVMSLSLAPDTR-LFVSGACDASAKLWDVREGM--------------CRQTFTGHESDINAICFFPNGN-AFAT 243 (340)
T ss_dssp ECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTCS--------------EEEEECCCSSCEEEEEECTTSS-EEEE
T ss_pred EcCCCCceEEEEECCCCC-EEEEEeCCCcEEEEECCCCe--------------eEEEEcCCcCCEEEEEEcCCCC-EEEE
Confidence 899999999999999998 69999999999999998753 3456889999999999999999 8889
Q ss_pred EeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCC
Q psy4571 269 VSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGT 348 (437)
Q Consensus 269 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h 348 (437)
|+.||.|++||+++++....+.. .....++..++|+|+|+++++|+.|+. +++||+.+++.+..+.+|
T Consensus 244 ~s~d~~v~iwd~~~~~~~~~~~~-~~~~~~v~~~~~s~~g~~l~~g~~d~~-----------i~vwd~~~~~~~~~~~~h 311 (340)
T 1got_B 244 GSDDATCRLFDLRADQELMTYSH-DNIICGITSVSFSKSGRLLLAGYDDFN-----------CNVWDALKADRAGVLAGH 311 (340)
T ss_dssp EETTSCEEEEETTTTEEEEEECC-TTCCSCEEEEEECTTSSEEEEEETTSE-----------EEEEETTTCCEEEEEECC
T ss_pred EcCCCcEEEEECCCCcEEEEEcc-CCcccceEEEEECCCCCEEEEECCCCe-----------EEEEEcccCcEeeEeecC
Confidence 99999999999998766554432 112235677899999999999999998 899999999999999999
Q ss_pred CccccccCCCCCCcccccc
Q psy4571 349 EEESSDRHSSDNDTEDLNS 367 (437)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~ 367 (437)
...+.++.++|+|..++++
T Consensus 312 ~~~v~~~~~s~dg~~l~s~ 330 (340)
T 1got_B 312 DNRVSCLGVTDDGMAVATG 330 (340)
T ss_dssp SSCEEEEEECTTSSCEEEE
T ss_pred CCcEEEEEEcCCCCEEEEE
Confidence 9999999999999887765
No 7
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1.3e-38 Score=321.76 Aligned_cols=334 Identities=15% Similarity=0.195 Sum_probs=257.6
Q ss_pred cceeEEecCC------cccccceeEEEEeeCCCcceEEEeeccCceEeeecC-------------CCceeEEEecCCCCe
Q psy4571 20 NAFFTWSALP------LSHSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKN-------------TPFLYDLVVNNYVAN 80 (437)
Q Consensus 20 ~~~~~~~~~~------~~~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~-------------~~~~~~~~~~~~~~~ 80 (437)
..+.+|.... +.-+...|.+++|+ |++++|++|+.|++|++|+.. .+.+..+.|++++..
T Consensus 39 ~~v~l~~~~~~~~~~~~~~h~~~v~~~~~s-pdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~ 117 (611)
T 1nr0_A 39 TSVYTVPVGSLTDTEIYTEHSHQTTVAKTS-PSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKR 117 (611)
T ss_dssp TEEEEEETTCSSCCEEECCCSSCEEEEEEC-TTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCE
T ss_pred CEEEEecCCCcccCeEecCCCCceEEEEEC-CCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCE
Confidence 4555665432 22345679999999 999999999999999999953 345778889999888
Q ss_pred EEEecC-----ceEEEEEeeec--cccccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeE
Q psy4571 81 ISCILN-----ISILFFEIIFT--QNFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVN 153 (437)
Q Consensus 81 i~~~~~-----~~i~~~~~~~~--~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~ 153 (437)
+.+..+ +.|++||.... ....+...|++++|+|++...|++|+.|++|++||.. ..+....+.+|...|.
T Consensus 118 l~~~~~~~~~~~~v~~wd~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~---~~~~~~~l~~H~~~V~ 194 (611)
T 1nr0_A 118 IAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGP---PFKFKSTFGEHTKFVH 194 (611)
T ss_dssp EEEEECCSSCSEEEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETT---TBEEEEEECCCSSCEE
T ss_pred EEEEECCCCceeEEEEeeCCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECC---CCeEeeeeccccCceE
Confidence 855443 47888884221 1234677899999999655579999999999999987 4566788899999999
Q ss_pred EEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEec-------cCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCC
Q psy4571 154 CLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFE-------SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226 (437)
Q Consensus 154 ~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~-------~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~ 226 (437)
+++|+|+++ +|++|+.|++|++||+.+++. ...+. +|.+.|.+++|+|+++ .|++|+.|++|++||++++
T Consensus 195 ~v~fspdg~-~las~s~D~~i~lwd~~~g~~-~~~~~~~~~~~~~h~~~V~~v~~spdg~-~l~s~s~D~~v~lWd~~~~ 271 (611)
T 1nr0_A 195 SVRYNPDGS-LFASTGGDGTIVLYNGVDGTK-TGVFEDDSLKNVAHSGSVFGLTWSPDGT-KIASASADKTIKIWNVATL 271 (611)
T ss_dssp EEEECTTSS-EEEEEETTSCEEEEETTTCCE-EEECBCTTSSSCSSSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTT
T ss_pred EEEECCCCC-EEEEEECCCcEEEEECCCCcE-eeeeccccccccccCCCEEEEEECCCCC-EEEEEeCCCeEEEEeCCCC
Confidence 999999999 499999999999999998665 55553 7999999999999998 5999999999999999876
Q ss_pred CCCCCCCCCC-----------------------------CCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEE
Q psy4571 227 GEEQSTEDAE-----------------------------DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQE 277 (437)
Q Consensus 227 ~~~~~~~~~~-----------------------------~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~i 277 (437)
+......... .........+.+|...|++++|+|+|+ +|++++.|+.|++
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~-~l~s~s~D~~v~~ 350 (611)
T 1nr0_A 272 KVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGK-TLFSADAEGHINS 350 (611)
T ss_dssp EEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEE
T ss_pred ceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCC-EEEEEeCCCcEEE
Confidence 5433221100 001124456779999999999999999 7889999999999
Q ss_pred EeCCCCCCceeee----------------------------eee------------------------------------
Q psy4571 278 YCDSTDSDTKTMR----------------------------LDS------------------------------------ 293 (437)
Q Consensus 278 wd~~~~~~~~~~~----------------------------~~~------------------------------------ 293 (437)
||+.+++....+. ...
T Consensus 351 Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~ 430 (611)
T 1nr0_A 351 WDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAAC 430 (611)
T ss_dssp EETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEE
T ss_pred EECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEe
Confidence 9998765422210 000
Q ss_pred ---------------cccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhh--hhhhcCCCccccccC
Q psy4571 294 ---------------IRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEE--QRQLLGTEEESSDRH 356 (437)
Q Consensus 294 ---------------~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~--~~~~~~h~~~~~~~~ 356 (437)
.+...+..++|+|||+++++|+.|++ |++||+.+++. ... .+|...+..+.
T Consensus 431 ~~~v~~~~~~~~~~~~~~~~v~~va~spdg~~lasgs~D~~-----------v~lwd~~~~~~~~~~~-~~h~~~v~~v~ 498 (611)
T 1nr0_A 431 YKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSK-----------VHVYKLSGASVSEVKT-IVHPAEITSVA 498 (611)
T ss_dssp SSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEETTSE-----------EEEEEEETTEEEEEEE-EECSSCEEEEE
T ss_pred CceEEEEeCCceeeeecCCCceEEEEeCCCCEEEEeCCCCe-----------EEEEEccCCceeeeec-cCCCCceEEEE
Confidence 00112345689999999999999998 89999877643 233 78999999999
Q ss_pred CCCCCcccccc-------ccccCH
Q psy4571 357 SSDNDTEDLNS-------IWSMTD 373 (437)
Q Consensus 357 ~~~~~~~~~~~-------~w~~~~ 373 (437)
|+|+|..+++. +|+...
T Consensus 499 fspdg~~las~s~d~~v~~w~~~~ 522 (611)
T 1nr0_A 499 FSNNGAFLVATDQSRKVIPYSVAN 522 (611)
T ss_dssp ECTTSSEEEEEETTSCEEEEEGGG
T ss_pred ECCCCCEEEEEcCCCCEEEEEcCC
Confidence 99999988764 788743
No 8
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=2.9e-38 Score=297.77 Aligned_cols=280 Identities=18% Similarity=0.198 Sum_probs=234.5
Q ss_pred cccccceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceE
Q psy4571 30 LSHSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDV 109 (437)
Q Consensus 30 ~~~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~ 109 (437)
+.-+.-.|++++|+ |++.+|+||+.|++|++|+..++....... .+...|.++
T Consensus 60 l~gH~~~V~~~~~s-~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~--------------------------~~~~~v~~~ 112 (354)
T 2pbi_B 60 LKGHGNKVLCMDWC-KDKRRIVSSSQDGKVIVWDSFTTNKEHAVT--------------------------MPCTWVMAC 112 (354)
T ss_dssp EECCSSCEEEEEEC-TTSSEEEEEETTSEEEEEETTTCCEEEEEE--------------------------CSSSCCCEE
T ss_pred ecCCCCeEEEEEEC-CCCCEEEEEeCCCeEEEEECCCCCcceEEe--------------------------cCCCCEEEE
Confidence 34456679999999 999999999999999999977655433221 123468899
Q ss_pred EeeCCCCCEEEEEECCCcEEEEEcCCCCC---CCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceee
Q psy4571 110 AWHLLHESLFGSVADDQKLMIWDTRSHNV---SKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKL 186 (437)
Q Consensus 110 ~~sp~~~~~l~~~~~dg~v~vwd~~~~~~---~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~ 186 (437)
+|+| ++.++++|+.|+.+++|++..... ......+.+|.+.|.+++|+|++.. |++|+.|++|++||+++++. +
T Consensus 113 ~~sp-~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~-l~t~s~D~~v~lwd~~~~~~-~ 189 (354)
T 2pbi_B 113 AYAP-SGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQ-ILTASGDGTCALWDVESGQL-L 189 (354)
T ss_dssp EECT-TSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSE-EEEEETTSEEEEEETTTCCE-E
T ss_pred EECC-CCCEEEEeeCCCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCE-EEEEeCCCcEEEEeCCCCeE-E
Confidence 9999 689999999999999999864321 2345667789999999999999985 99999999999999999665 7
Q ss_pred eEeccCCCceEEEEEcCC--CCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCe
Q psy4571 187 HSFESHKDEIFQVQWSPH--NETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 264 (437)
Q Consensus 187 ~~~~~h~~~v~~v~~~p~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~ 264 (437)
..+.+|...|.+++|+|+ +. .|++|+.||.|++||++++. .+..+.+|...|++++|+|++.
T Consensus 190 ~~~~~h~~~v~~~~~~~~~~g~-~l~sgs~Dg~v~~wd~~~~~--------------~~~~~~~h~~~v~~v~~~p~~~- 253 (354)
T 2pbi_B 190 QSFHGHGADVLCLDLAPSETGN-TFVSGGCDKKAMVWDMRSGQ--------------CVQAFETHESDVNSVRYYPSGD- 253 (354)
T ss_dssp EEEECCSSCEEEEEECCCSSCC-EEEEEETTSCEEEEETTTCC--------------EEEEECCCSSCEEEEEECTTSS-
T ss_pred EEEcCCCCCeEEEEEEeCCCCC-EEEEEeCCCeEEEEECCCCc--------------EEEEecCCCCCeEEEEEeCCCC-
Confidence 889999999999999885 55 69999999999999998863 3455789999999999999999
Q ss_pred EEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhh
Q psy4571 265 VICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQ 344 (437)
Q Consensus 265 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~ 344 (437)
++++|+.|++|++||++.++....+... ....+...++|+|+|.++++|+.|+. +++||+.+++.+..
T Consensus 254 ~l~s~s~D~~v~lwd~~~~~~~~~~~~~-~~~~~~~~~~~s~~g~~l~~g~~d~~-----------i~vwd~~~~~~~~~ 321 (354)
T 2pbi_B 254 AFASGSDDATCRLYDLRADREVAIYSKE-SIIFGASSVDFSLSGRLLFAGYNDYT-----------INVWDVLKGSRVSI 321 (354)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECCT-TCCSCEEEEEECTTSSEEEEEETTSC-----------EEEEETTTCSEEEE
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEEcCC-CcccceeEEEEeCCCCEEEEEECCCc-----------EEEEECCCCceEEE
Confidence 8999999999999999987655443321 12235567799999999999999998 89999999999999
Q ss_pred hcCCCccccccCCCCCCcccccc
Q psy4571 345 LLGTEEESSDRHSSDNDTEDLNS 367 (437)
Q Consensus 345 ~~~h~~~~~~~~~~~~~~~~~~~ 367 (437)
+.+|.+.+.++.++|+|..+++.
T Consensus 322 l~~h~~~v~~l~~spdg~~l~sg 344 (354)
T 2pbi_B 322 LFGHENRVSTLRVSPDGTAFCSG 344 (354)
T ss_dssp ECCCSSCEEEEEECTTSSCEEEE
T ss_pred EECCCCcEEEEEECCCCCEEEEE
Confidence 99999999999999999987765
No 9
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1e-38 Score=299.17 Aligned_cols=278 Identities=17% Similarity=0.152 Sum_probs=222.0
Q ss_pred CCceeEEEecCCCCeEEEecCceEEEEEeeec---------------cccccCCCcceEEeeCCCCCEEEEEECCCcEEE
Q psy4571 66 TPFLYDLVVNNYVANISCILNISILFFEIIFT---------------QNFPFPLSRQDVAWHLLHESLFGSVADDQKLMI 130 (437)
Q Consensus 66 ~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~---------------~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~v 130 (437)
...+..+.|++++..+....++++++||.... ........|.+++|+| + +.|++|+.||+|+|
T Consensus 30 ~~~v~~~~fs~dG~~l~~~sd~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-d-~~l~~~s~dg~v~l 107 (344)
T 4gqb_B 30 ERQLEAARYRSDGALLLGASSLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVG-E-RGILVASDSGAVEL 107 (344)
T ss_dssp CSEEEEEEECTTSCEEEEEECCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEET-T-TEEEEEETTSEEEE
T ss_pred cCCEEEEEECCCCCEEEEEeCCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeC-C-CeEEEEECCCEEEE
Confidence 34578889999999888777888888874311 0112345799999999 3 57889999999999
Q ss_pred EEcCCCCCCCCe-eeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEE
Q psy4571 131 WDTRSHNVSKPS-HTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETIL 209 (437)
Q Consensus 131 wd~~~~~~~~~~-~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l 209 (437)
||+.+++..... ....+|.+.|.+++|+|++++ |++|+.|++|++||+++++. +..+.+|.+.|++++|+|++..+|
T Consensus 108 Wd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~-l~sgs~d~~i~iwd~~~~~~-~~~~~~h~~~V~~~~~~~~~~~~l 185 (344)
T 4gqb_B 108 WELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQ-AVSGSKDICIKVWDLAQQVV-LSSYRAHAAQVTCVAASPHKDSVF 185 (344)
T ss_dssp EEECTTSSCEEEEEEEECCSSCEEEEEECTTSSE-EEEEETTSCEEEEETTTTEE-EEEECCCSSCEEEEEECSSCTTEE
T ss_pred EeccCCCceeEeeccccCCCCCEEEEEECCCCCE-EEEEeCCCeEEEEECCCCcE-EEEEcCcCCceEEEEecCCCCCce
Confidence 999854322221 234589999999999999995 99999999999999999655 888999999999999999998789
Q ss_pred EEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceee
Q psy4571 210 ASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTM 289 (437)
Q Consensus 210 ~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 289 (437)
++|+.|++|++||+++++..... ....|...+.+++|+|++..++++|+.||.|++||+++++++..+
T Consensus 186 ~s~s~D~~v~iwd~~~~~~~~~~------------~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~ 253 (344)
T 4gqb_B 186 LSCSEDNRILLWDTRCPKPASQI------------GCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSS 253 (344)
T ss_dssp EEEETTSCEEEEETTSSSCEEEC------------C----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEE
T ss_pred eeeccccccccccccccceeeee------------ecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEE
Confidence 99999999999999987543321 123556679999999987668999999999999999999988877
Q ss_pred eeeecccCCceeeeecCCC-CcccccCCCCcccccccccccccccccchhhhhhhhhcCCCccccccCCCCCCcccc-cc
Q psy4571 290 RLDSIRSNGGISSTASPTA-SSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHSSDNDTEDL-NS 367 (437)
Q Consensus 290 ~~~~~~~~~~~~~~~s~~g-~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~-~~ 367 (437)
.. +...+..++|+|+| ++|++|+.|++ |++||+.+++.. .+.+|.+.|.++.|+|++..++ ++
T Consensus 254 ~~---h~~~v~~v~fsp~g~~~lasgs~D~~-----------i~vwd~~~~~~~-~~~~H~~~V~~v~~sp~~~~llas~ 318 (344)
T 4gqb_B 254 AV---HSQCVTGLVFSPHSVPFLASLSEDCS-----------LAVLDSSLSELF-RSQAHRDFVRDATWSPLNHSLLTTV 318 (344)
T ss_dssp EC---CSSCEEEEEECSSSSCCEEEEETTSC-----------EEEECTTCCEEE-EECCCSSCEEEEEECSSSTTEEEEE
T ss_pred cC---CCCCEEEEEEccCCCeEEEEEeCCCe-----------EEEEECCCCcEE-EEcCCCCCEEEEEEeCCCCeEEEEE
Confidence 64 55677888999998 57899999999 899999988764 5789999999999999987644 32
Q ss_pred -------ccccCHH
Q psy4571 368 -------IWSMTDE 374 (437)
Q Consensus 368 -------~w~~~~~ 374 (437)
+|.+..+
T Consensus 319 s~D~~v~~w~v~~~ 332 (344)
T 4gqb_B 319 GWDHQVVHHVVPTE 332 (344)
T ss_dssp ETTSCEEEEECCC-
T ss_pred cCCCeEEEEECCCC
Confidence 7887544
No 10
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.6e-37 Score=291.71 Aligned_cols=295 Identities=18% Similarity=0.284 Sum_probs=229.5
Q ss_pred cceeEEEEeeCCCcceEEEeeccCceEeeecC--------------CCceeEEEecCCCCeE-EEecCceEEEEEeeecc
Q psy4571 34 IYRFYRLCVAEPFDDAVEERVINEEYKIWKKN--------------TPFLYDLVVNNYVANI-SCILNISILFFEIIFTQ 98 (437)
Q Consensus 34 ~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~--------------~~~~~~~~~~~~~~~i-~~~~~~~i~~~~~~~~~ 98 (437)
...|.+++|+ |++++|++|+.|++|++|+.. .+.+..+.|++.+..+ +++.|+.+++|+.....
T Consensus 16 ~~~v~~l~~s-p~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~ 94 (345)
T 3fm0_A 16 DSRCWFLAWN-PAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDD 94 (345)
T ss_dssp TSCEEEEEEC-TTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-
T ss_pred CCcEEEEEEC-CCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCC
Confidence 3478999999 999999999999999999843 3457788888888766 66789999999975432
Q ss_pred ------ccccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCC
Q psy4571 99 ------NFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADK 172 (437)
Q Consensus 99 ------~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg 172 (437)
...+...|.+++|+| ++.+|++|+.|++|++||+........+..+.+|...|.+++|+|++.. |++|+.|+
T Consensus 95 ~~~~~~~~~h~~~v~~v~~sp-~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~-l~s~s~d~ 172 (345)
T 3fm0_A 95 FECVTTLEGHENEVKSVAWAP-SGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQEL-LASASYDD 172 (345)
T ss_dssp EEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSC-EEEEETTS
T ss_pred eEEEEEccCCCCCceEEEEeC-CCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCE-EEEEeCCC
Confidence 123677899999999 6899999999999999999854433456778899999999999999995 99999999
Q ss_pred eEEEEeCCCCce-eeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCC-CCCCCceEEEecC-c
Q psy4571 173 TVALWDLRNLKL-KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDA-EDGPPELLFIHGG-H 249 (437)
Q Consensus 173 ~i~lwd~~~~~~-~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~-~~~~~~~~~~~~~-h 249 (437)
+|++||.++.+. +...+.+|...|.+++|+|+++ .|++|+.|++|++||............. ......++..+.+ |
T Consensus 173 ~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~-~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h 251 (345)
T 3fm0_A 173 TVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQ-RLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFH 251 (345)
T ss_dssp CEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSC
T ss_pred cEEEEEecCCCEEEEEEecCCCCceEEEEECCCCC-EEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCC
Confidence 999999987542 3567889999999999999998 5999999999999997554332221111 1111234445555 8
Q ss_pred cccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCce----eee--eeecccCCceeeeecCCCC-cccccCCCCcccc
Q psy4571 250 TAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTK----TMR--LDSIRSNGGISSTASPTAS-STASESPTPTNSV 322 (437)
Q Consensus 250 ~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~----~~~--~~~~~~~~~~~~~~s~~g~-~l~s~s~d~~~~~ 322 (437)
...|.+++|+|++. .+++++.|+.|++|+...+.... .+. ....|...+..++|+|++. +|++|+.|+.
T Consensus 252 ~~~v~~v~~~~~~~-~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~--- 327 (345)
T 3fm0_A 252 SRTIYDIAWCQLTG-ALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGE--- 327 (345)
T ss_dssp SSCEEEEEECTTTC-CEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSC---
T ss_pred CCcEEEEEEecCCC-EEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCc---
Confidence 88999999999999 78899999999999987653221 111 1223556678889999984 8999999999
Q ss_pred cccccccccccccchhhhhhhh
Q psy4571 323 HEKNYWQGLVLFDILVCEEQRQ 344 (437)
Q Consensus 323 ~~~~~~~~i~~wd~~~~~~~~~ 344 (437)
|++|++.+++....
T Consensus 328 --------v~~W~~~~~~~~~~ 341 (345)
T 3fm0_A 328 --------VAFWKYQRPEGLHH 341 (345)
T ss_dssp --------EEEEEECC------
T ss_pred --------EEEEEecCCCCccc
Confidence 89999988776543
No 11
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=3e-38 Score=300.61 Aligned_cols=287 Identities=15% Similarity=0.189 Sum_probs=227.4
Q ss_pred cccccceeEEEEeeCCCcceEEEeeccCceEeeecCC-----------CceeEEEecCCCCeE-EEecCceEEEEEeeec
Q psy4571 30 LSHSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNT-----------PFLYDLVVNNYVANI-SCILNISILFFEIIFT 97 (437)
Q Consensus 30 ~~~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~-----------~~~~~~~~~~~~~~i-~~~~~~~i~~~~~~~~ 97 (437)
+.-+...|++++|+ |++++|++|+.|++|++|+..+ ..+..+.+++.+..+ +++.|+.+++|++...
T Consensus 62 l~gH~~~V~~~~~s-p~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~ 140 (380)
T 3iz6_a 62 LQGHSGKVYSLDWT-PEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQ 140 (380)
T ss_dssp ECCCSSCEEEEEEC-TTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCC
T ss_pred ccccccEEEEEEEc-CCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCC
Confidence 34456679999999 9999999999999999999544 445666778887777 5567999999997542
Q ss_pred c-----------ccccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeee-----ccCCCCeEEEEEeCCC
Q psy4571 98 Q-----------NFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTV-----DAHTAEVNCLSFNPYS 161 (437)
Q Consensus 98 ~-----------~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~-----~~h~~~v~~l~~~~~~ 161 (437)
. ...+...+.+++|+|.++..|++|+.|++|++||+.+ .+.+..+ .+|...|.+++|+|.+
T Consensus 141 ~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~---~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 217 (380)
T 3iz6_a 141 ADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTT---GQRISIFGSEFPSGHTADVLSLSINSLN 217 (380)
T ss_dssp SSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTT---CCEEEEECCCSSSSCCSCEEEEEECSSS
T ss_pred ccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCC---CcEEEEeecccCCCCccCeEEEEeecCC
Confidence 1 1235667899999997778899999999999999984 4555544 6799999999998744
Q ss_pred CcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCc
Q psy4571 162 EYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPE 241 (437)
Q Consensus 162 ~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~ 241 (437)
..+|++|+.|++|++||++....++..+.+|.+.|.+++|+|+++ .|++|+.||+|++||++++...........
T Consensus 218 ~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~-~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~---- 292 (380)
T 3iz6_a 218 ANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQ-RFGTGSDDGTCRLFDMRTGHQLQVYNREPD---- 292 (380)
T ss_dssp CCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSS-EEEEECSSSCEEEEETTTTEEEEEECCCCS----
T ss_pred CCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCC-eEEEEcCCCeEEEEECCCCcEEEEeccccc----
Confidence 346999999999999999865566888999999999999999998 599999999999999998643322110000
Q ss_pred eEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeee-ecccCCceeeeecCCCCcccccCCCCcc
Q psy4571 242 LLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLD-SIRSNGGISSTASPTASSTASESPTPTN 320 (437)
Q Consensus 242 ~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~s~~g~~l~s~s~d~~~ 320 (437)
....+...|++++|+|+|+ ++++|+.||.|++||+.+++....+... ..|...+..++|+|+|.+|++|+.|++
T Consensus 293 ---~~~~~~~~v~~~~~s~~g~-~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~- 367 (380)
T 3iz6_a 293 ---RNDNELPIVTSVAFSISGR-LLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKN- 367 (380)
T ss_dssp ---SSCCSSCSCSEEEECSSSS-EEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSC-
T ss_pred ---ccccccCceEEEEECCCCC-EEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCC-
Confidence 0012233589999999999 8889999999999999988776655321 335566778899999999999999999
Q ss_pred cccccccccccccccchhhh
Q psy4571 321 SVHEKNYWQGLVLFDILVCE 340 (437)
Q Consensus 321 ~~~~~~~~~~i~~wd~~~~~ 340 (437)
+++||+..++
T Consensus 368 ----------i~iW~~~~~~ 377 (380)
T 3iz6_a 368 ----------LKIWAFSGHR 377 (380)
T ss_dssp ----------EEEEECCSSS
T ss_pred ----------EEEEecCCCc
Confidence 7888886553
No 12
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=7.5e-38 Score=300.88 Aligned_cols=270 Identities=17% Similarity=0.198 Sum_probs=237.0
Q ss_pred eecCCCceeEEEecCCCCeE-EEecCceEEEEEeeecccc----ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCC
Q psy4571 62 WKKNTPFLYDLVVNNYVANI-SCILNISILFFEIIFTQNF----PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSH 136 (437)
Q Consensus 62 w~~~~~~~~~~~~~~~~~~i-~~~~~~~i~~~~~~~~~~~----~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~ 136 (437)
...|.+.+..+.+++....+ +++.|+.|++||...++.. .+...|.+++|+| ++.+|++|+.||+|++||+.
T Consensus 104 l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~-~~~~l~sgs~D~~i~iwd~~-- 180 (410)
T 1vyh_C 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH-SGKLLASCSADMTIKLWDFQ-- 180 (410)
T ss_dssp EECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECT-TSSEEEEEETTSCCCEEETT--
T ss_pred ecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcC-CCCEEEEEeCCCeEEEEeCC--
Confidence 34677889999999987766 7778999999997655432 3667899999999 68899999999999999998
Q ss_pred CCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCC
Q psy4571 137 NVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDR 216 (437)
Q Consensus 137 ~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg 216 (437)
..+.+..+.+|...|.+++|+|++.. |++|+.|++|++||++++.. +..+.+|...|.+++++|++. ++++|+.|+
T Consensus 181 -~~~~~~~~~~h~~~V~~v~~~p~~~~-l~s~s~D~~i~~wd~~~~~~-~~~~~~h~~~v~~~~~~~~g~-~l~s~s~D~ 256 (410)
T 1vyh_C 181 -GFECIRTMHGHDHNVSSVSIMPNGDH-IVSASRDKTIKMWEVQTGYC-VKTFTGHREWVRMVRPNQDGT-LIASCSNDQ 256 (410)
T ss_dssp -SSCEEECCCCCSSCEEEEEECSSSSE-EEEEETTSEEEEEETTTCCE-EEEEECCSSCEEEEEECTTSS-EEEEEETTS
T ss_pred -CCceeEEEcCCCCCEEEEEEeCCCCE-EEEEeCCCeEEEEECCCCcE-EEEEeCCCccEEEEEECCCCC-EEEEEcCCC
Confidence 56778888999999999999999995 99999999999999999665 788899999999999999998 699999999
Q ss_pred eEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccC--------------------CCeEEEEEeCCCeEE
Q psy4571 217 RLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPN--------------------EPWVICSVSEDNIMQ 276 (437)
Q Consensus 217 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~--------------------~~~~l~s~~~dg~i~ 276 (437)
.|++||+++.. ....+.+|...|.+++|+|+ +. ++++|+.|+.|+
T Consensus 257 ~v~vwd~~~~~--------------~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~l~sgs~D~~i~ 321 (410)
T 1vyh_C 257 TVRVWVVATKE--------------CKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGP-FLLSGSRDKTIK 321 (410)
T ss_dssp CEEEEETTTCC--------------EEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CC-EEEEEETTSEEE
T ss_pred eEEEEECCCCc--------------eeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCC-EEEEEeCCCeEE
Confidence 99999998753 34557899999999999996 45 789999999999
Q ss_pred EEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCCccccccC
Q psy4571 277 EYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRH 356 (437)
Q Consensus 277 iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~ 356 (437)
+||++++.++..+.. +...+..++|+|+|.++++|+.|+. |++||+.+++.+..+.+|...+.++.
T Consensus 322 iwd~~~~~~~~~~~~---h~~~v~~v~~~~~g~~l~s~s~D~~-----------i~vwd~~~~~~~~~~~~h~~~v~~l~ 387 (410)
T 1vyh_C 322 MWDVSTGMCLMTLVG---HDNWVRGVLFHSGGKFILSCADDKT-----------LRVWDYKNKRCMKTLNAHEHFVTSLD 387 (410)
T ss_dssp EEETTTTEEEEEEEC---CSSCEEEEEECSSSSCEEEEETTTE-----------EEEECCTTSCCCEEEECCSSCEEEEE
T ss_pred EEECCCCceEEEEEC---CCCcEEEEEEcCCCCEEEEEeCCCe-----------EEEEECCCCceEEEEcCCCCcEEEEE
Confidence 999999887766653 4556778899999999999999998 89999999999999999999999999
Q ss_pred CCCCCcccccc
Q psy4571 357 SSDNDTEDLNS 367 (437)
Q Consensus 357 ~~~~~~~~~~~ 367 (437)
++|++..++++
T Consensus 388 ~~~~~~~l~sg 398 (410)
T 1vyh_C 388 FHKTAPYVVTG 398 (410)
T ss_dssp ECSSSSCEEEE
T ss_pred EcCCCCEEEEE
Confidence 99999877764
No 13
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=3.5e-37 Score=309.22 Aligned_cols=293 Identities=19% Similarity=0.321 Sum_probs=251.9
Q ss_pred ccceeEEEEeeCCCcceEEEeeccCceEeeec----------CCCceeEEEecCCCCeE-EEecCceEEEEEeeeccc--
Q psy4571 33 SIYRFYRLCVAEPFDDAVEERVINEEYKIWKK----------NTPFLYDLVVNNYVANI-SCILNISILFFEIIFTQN-- 99 (437)
Q Consensus 33 ~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~----------~~~~~~~~~~~~~~~~i-~~~~~~~i~~~~~~~~~~-- 99 (437)
+...|.+++|+ |++..+++++.|+.+++|+. |.+.+..+.+++....+ ++..|+.|++|+......
T Consensus 261 ~~~~v~~v~~~-~d~~~l~~~~~d~~i~~w~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~~~~ 339 (577)
T 2ymu_A 261 HSSSVNGVAFR-PDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQHLQT 339 (577)
T ss_dssp CSSCEEEEEEC-TTSSEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEE
T ss_pred CCCCEEEEEEc-CCCCEEEEEeCCCEEEEEeCCCcEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeeEE
Confidence 45678999999 99999999999999999994 34567788888887766 677899999999653322
Q ss_pred -cccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEe
Q psy4571 100 -FPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWD 178 (437)
Q Consensus 100 -~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd 178 (437)
..+...+.+++|+| ++.+|++|+.||.|++||.. .+.+..+.+|...|.+++|+|++++ |++++.|+.|++||
T Consensus 340 ~~~~~~~v~~~~~s~-~g~~l~~~~~dg~v~~~~~~----~~~~~~~~~~~~~v~~~~~s~dg~~-l~~~~~d~~v~~~~ 413 (577)
T 2ymu_A 340 LTGHSSSVWGVAFSP-DGQTIASASDDKTVKLWNRN----GQLLQTLTGHSSSVRGVAFSPDGQT-IASASDDKTVKLWN 413 (577)
T ss_dssp ECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEETT----CCEEEEEECCSSCEEEEEECTTSSC-EEEEETTSEEEEEC
T ss_pred EeCCCCCEEEEEECC-CCCEEEEEeCCCEEEEEcCC----CCEEEEecCCCCCeEEEEECCCCCE-EEEEeCCCEEEEEe
Confidence 23567899999999 68899999999999999964 4677888899999999999999996 99999999999999
Q ss_pred CCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEE
Q psy4571 179 LRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 258 (437)
Q Consensus 179 ~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~ 258 (437)
... +. +..+.+|...|++++|+|+++ .|++++.|+.|++||... +.+..+.+|...|++++|
T Consensus 414 ~~~-~~-~~~~~~~~~~v~~~~~s~d~~-~l~~~~~d~~v~~w~~~~---------------~~~~~~~~~~~~v~~~~~ 475 (577)
T 2ymu_A 414 RNG-QL-LQTLTGHSSSVWGVAFSPDDQ-TIASASDDKTVKLWNRNG---------------QLLQTLTGHSSSVRGVAF 475 (577)
T ss_dssp TTC-CE-EEEEECCSSCEEEEEECTTSS-EEEEEETTSEEEEEETTS---------------CEEEEEECCSSCEEEEEE
T ss_pred CCC-CE-EEEecCCCCCeEEEEECCCCC-EEEEEcCCCEEEEEECCC---------------CEEEEEcCCCCCEEEEEE
Confidence 653 43 778889999999999999998 599999999999999643 345667899999999999
Q ss_pred ccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchh
Q psy4571 259 NPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILV 338 (437)
Q Consensus 259 ~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~ 338 (437)
+|+++ +|++++.|+.|++||. ++++.+.+.. +...+..++|+|+|++|++++.|+. |++||. +
T Consensus 476 spd~~-~las~~~d~~i~iw~~-~~~~~~~~~~---h~~~v~~l~~s~dg~~l~s~~~dg~-----------v~lwd~-~ 538 (577)
T 2ymu_A 476 SPDGQ-TIASASDDKTVKLWNR-NGQLLQTLTG---HSSSVRGVAFSPDGQTIASASDDKT-----------VKLWNR-N 538 (577)
T ss_dssp CTTSC-EEEEEETTSEEEEEET-TSCEEEEEEC---CSSCEEEEEECTTSSCEEEEETTSE-----------EEEECT-T
T ss_pred cCCCC-EEEEEeCCCEEEEEcC-CCCEEEEEeC---CCCCEEEEEEcCCCCEEEEEECcCE-----------EEEEeC-C
Confidence 99999 8899999999999995 5666665543 5567788899999999999999998 899995 7
Q ss_pred hhhhhhhcCCCccccccCCCCCCcccccc
Q psy4571 339 CEEQRQLLGTEEESSDRHSSDNDTEDLNS 367 (437)
Q Consensus 339 ~~~~~~~~~h~~~~~~~~~~~~~~~~~~~ 367 (437)
++.+..+.+|.+.+..+.|+|+|+.+++.
T Consensus 539 ~~~~~~~~~h~~~v~~~~fs~dg~~l~s~ 567 (577)
T 2ymu_A 539 GQLLQTLTGHSSSVWGVAFSPDGQTIASA 567 (577)
T ss_dssp SCEEEEEECCSSCEEEEEECTTSSCEEEE
T ss_pred CCEEEEEcCCCCCEEEEEEcCCCCEEEEE
Confidence 88889999999999999999999987764
No 14
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=8.8e-38 Score=290.32 Aligned_cols=272 Identities=17% Similarity=0.244 Sum_probs=235.1
Q ss_pred EeeecCCCceeEEEecCCC----C-eEEEecCceEEEEEeeeccc------cccCCCcceEEeeCCCCCEEEEEECCCcE
Q psy4571 60 KIWKKNTPFLYDLVVNNYV----A-NISCILNISILFFEIIFTQN------FPFPLSRQDVAWHLLHESLFGSVADDQKL 128 (437)
Q Consensus 60 ~iw~~~~~~~~~~~~~~~~----~-~i~~~~~~~i~~~~~~~~~~------~~~~~~v~~~~~sp~~~~~l~~~~~dg~v 128 (437)
+....|.+.+..+.|.+.. . .++++.|++|++|++..... ..+...|.+++|+| ++.++++++.|++|
T Consensus 26 ~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~-~~~~l~s~s~D~~i 104 (321)
T 3ow8_A 26 KQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISH-TLPIAASSSLDAHI 104 (321)
T ss_dssp EETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECS-SSSEEEEEETTSEE
T ss_pred eecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECC-CCCEEEEEeCCCcE
Confidence 4455788999999997642 2 44888999999999764321 23677899999999 68899999999999
Q ss_pred EEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcE
Q psy4571 129 MIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETI 208 (437)
Q Consensus 129 ~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~ 208 (437)
++||+. ..+.+..+..|...+.+++|+|++++ |++|+.||.|++||+++++. ...+..|...|.+++|+|+++ +
T Consensus 105 ~lWd~~---~~~~~~~~~~~~~~~~~~~~spdg~~-l~~g~~dg~v~i~~~~~~~~-~~~~~~~~~~v~~~~~spdg~-~ 178 (321)
T 3ow8_A 105 RLWDLE---NGKQIKSIDAGPVDAWTLAFSPDSQY-LATGTHVGKVNIFGVESGKK-EYSLDTRGKFILSIAYSPDGK-Y 178 (321)
T ss_dssp EEEETT---TTEEEEEEECCTTCCCCEEECTTSSE-EEEECTTSEEEEEETTTCSE-EEEEECSSSCEEEEEECTTSS-E
T ss_pred EEEECC---CCCEEEEEeCCCccEEEEEECCCCCE-EEEEcCCCcEEEEEcCCCce-eEEecCCCceEEEEEECCCCC-E
Confidence 999998 55677888889999999999999995 99999999999999998665 677888999999999999998 5
Q ss_pred EEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCcee
Q psy4571 209 LASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKT 288 (437)
Q Consensus 209 l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 288 (437)
|++|+.||.|++||++++ +.+..+.+|...|.+++|+|+++ +|++|+.|+.|++||+++++....
T Consensus 179 lasg~~dg~i~iwd~~~~--------------~~~~~~~~h~~~v~~l~~spd~~-~l~s~s~dg~i~iwd~~~~~~~~~ 243 (321)
T 3ow8_A 179 LASGAIDGIINIFDIATG--------------KLLHTLEGHAMPIRSLTFSPDSQ-LLVTASDDGYIKIYDVQHANLAGT 243 (321)
T ss_dssp EEEEETTSCEEEEETTTT--------------EEEEEECCCSSCCCEEEECTTSC-EEEEECTTSCEEEEETTTCCEEEE
T ss_pred EEEEcCCCeEEEEECCCC--------------cEEEEEcccCCceeEEEEcCCCC-EEEEEcCCCeEEEEECCCcceeEE
Confidence 999999999999999875 44566889999999999999999 889999999999999998877665
Q ss_pred eeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCCccccccCCCCCCcccccc
Q psy4571 289 MRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHSSDNDTEDLNS 367 (437)
Q Consensus 289 ~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~ 367 (437)
+.. +...+..++|+|++.++++++.|++ +++||+.+++.+..+.+|.+.+..+.++|++..+++.
T Consensus 244 ~~~---h~~~v~~~~~sp~~~~l~s~s~D~~-----------v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~ 308 (321)
T 3ow8_A 244 LSG---HASWVLNVAFCPDDTHFVSSSSDKS-----------VKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSV 308 (321)
T ss_dssp ECC---CSSCEEEEEECTTSSEEEEEETTSC-----------EEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred EcC---CCCceEEEEECCCCCEEEEEeCCCc-----------EEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEE
Confidence 543 4566778899999999999999999 8999999999999999999999999999999877664
No 15
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1e-37 Score=294.25 Aligned_cols=297 Identities=18% Similarity=0.166 Sum_probs=221.5
Q ss_pred cceEEEeeccCceEeeec-------CCCceeEEEecCCCCeEEEec-------CceEEEEEeeecc--------ccccCC
Q psy4571 47 DDAVEERVINEEYKIWKK-------NTPFLYDLVVNNYVANISCIL-------NISILFFEIIFTQ--------NFPFPL 104 (437)
Q Consensus 47 ~~~l~tgs~d~~v~iw~~-------~~~~~~~~~~~~~~~~i~~~~-------~~~i~~~~~~~~~--------~~~~~~ 104 (437)
.++++.++.+...+.|+. |.+.+..+.|++++..+.... |+.+++|+...+. ...+..
T Consensus 16 ~~~~~~~~g~~~~~~w~~p~~~p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~ 95 (357)
T 4g56_B 16 ENLYFQSNGSSKGSAWGRPVTAPACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEA 95 (357)
T ss_dssp ------------------------CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSS
T ss_pred cceEEecCCCccccccCCCCCCcccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCC
Confidence 345556666777888983 567799999999999885543 6778888754332 123567
Q ss_pred CcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCC-CeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCc
Q psy4571 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSK-PSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLK 183 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~-~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~ 183 (437)
.|.+++|+| ++ .+++++.||+|++||+.+++... ......+|.+.|.+++|+|++.+ |++|+.|++|++||+++++
T Consensus 96 ~V~~~~~s~-d~-~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~-l~sgs~dg~v~iwd~~~~~ 172 (357)
T 4g56_B 96 GVTDVAWVS-EK-GILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQ-AVSGGKDFSVKVWDLSQKA 172 (357)
T ss_dssp CEEEEEEET-TT-EEEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSE-EEEEETTSCEEEEETTTTE
T ss_pred CEEEEEEcC-CC-CEEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCE-EEEEeCCCeEEEEECCCCc
Confidence 899999999 44 46678899999999998543222 22344589999999999999995 9999999999999999965
Q ss_pred eeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCC
Q psy4571 184 LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEP 263 (437)
Q Consensus 184 ~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~ 263 (437)
. +..+.+|...|++++|+|+++.++++++.|+.|++||+++++.... .....|...+.+++|+|++.
T Consensus 173 ~-~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~------------~~~~~~~~~v~~v~~sp~~~ 239 (357)
T 4g56_B 173 V-LKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATR------------IDFCASDTIPTSVTWHPEKD 239 (357)
T ss_dssp E-EEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCB------------CCCTTCCSCEEEEEECTTST
T ss_pred E-EEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeee------------eeeccccccccchhhhhccc
Confidence 5 8889999999999999999876789999999999999988765443 12456778899999999977
Q ss_pred eEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCC-CcccccCCCCcccccccccccccccccchhhhhh
Q psy4571 264 WVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTA-SSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQ 342 (437)
Q Consensus 264 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g-~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~ 342 (437)
.++++|+.|+.|++||++++++.+.+.. +...+..++|+|++ ++|++|+.|++ |++||+.+++.+
T Consensus 240 ~~la~g~~d~~i~~wd~~~~~~~~~~~~---~~~~v~~l~~sp~~~~~lasgs~D~~-----------i~iwd~~~~~~~ 305 (357)
T 4g56_B 240 DTFACGDETGNVSLVNIKNPDSAQTSAV---HSQNITGLAYSYHSSPFLASISEDCT-----------VAVLDADFSEVF 305 (357)
T ss_dssp TEEEEEESSSCEEEEESSCGGGCEEECC---CSSCEEEEEECSSSSCCEEEEETTSC-----------EEEECTTSCEEE
T ss_pred ceEEEeecccceeEEECCCCcEeEEEec---cceeEEEEEEcCCCCCEEEEEeCCCE-----------EEEEECCCCcEe
Confidence 6899999999999999999988777654 45667788999998 57899999998 899999999876
Q ss_pred hhhcCCCccccccCCCC-CCcccccc-------ccccCHH
Q psy4571 343 RQLLGTEEESSDRHSSD-NDTEDLNS-------IWSMTDE 374 (437)
Q Consensus 343 ~~~~~h~~~~~~~~~~~-~~~~~~~~-------~w~~~~~ 374 (437)
+. .+|.+.|.+++|+| ++..+++. +|++..+
T Consensus 306 ~~-~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 306 RD-LSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp EE-CCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC--
T ss_pred EE-CCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCC
Confidence 54 48999999999998 67776654 8988543
No 16
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.2e-36 Score=281.56 Aligned_cols=276 Identities=21% Similarity=0.283 Sum_probs=230.9
Q ss_pred ccccceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEE
Q psy4571 31 SHSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVA 110 (437)
Q Consensus 31 ~~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~ 110 (437)
.-+...|.+++|+ |+++++++|+.|+.+++|+..++...... ..+...|.+++
T Consensus 20 ~gh~~~v~~~~~s-~~~~~l~s~~~dg~i~iw~~~~~~~~~~~--------------------------~~h~~~v~~~~ 72 (312)
T 4ery_A 20 AGHTKAVSSVKFS-PNGEWLASSSADKLIKIWGAYDGKFEKTI--------------------------SGHKLGISDVA 72 (312)
T ss_dssp CCCSSCEEEEEEC-TTSSEEEEEETTSCEEEEETTTCCEEEEE--------------------------CCCSSCEEEEE
T ss_pred cccCCcEEEEEEC-CCCCEEEEeeCCCeEEEEeCCCcccchhh--------------------------ccCCCceEEEE
Confidence 4456689999999 99999999999999999998766543321 12346788999
Q ss_pred eeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEec
Q psy4571 111 WHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFE 190 (437)
Q Consensus 111 ~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~ 190 (437)
|+| ++++|++|+.||.|++||++ ..+.+..+.+|...|.+++|+|++.. |++|+.||.|++||+++++. +..+.
T Consensus 73 ~~~-~~~~l~s~~~d~~i~vwd~~---~~~~~~~~~~~~~~v~~~~~~~~~~~-l~s~~~d~~i~iwd~~~~~~-~~~~~ 146 (312)
T 4ery_A 73 WSS-DSNLLVSASDDKTLKIWDVS---SGKCLKTLKGHSNYVFCCNFNPQSNL-IVSGSFDESVRIWDVKTGKC-LKTLP 146 (312)
T ss_dssp ECT-TSSEEEEEETTSEEEEEETT---TCCEEEEEECCSSCEEEEEECSSSSE-EEEEETTSCEEEEETTTCCE-EEEEC
T ss_pred EcC-CCCEEEEECCCCEEEEEECC---CCcEEEEEcCCCCCEEEEEEcCCCCE-EEEEeCCCcEEEEECCCCEE-EEEec
Confidence 999 68899999999999999998 56778888999999999999999995 99999999999999998665 77888
Q ss_pred cCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEe
Q psy4571 191 SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVS 270 (437)
Q Consensus 191 ~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~ 270 (437)
.|..+|.+++|+|+++ ++++|+.||.|++||++++.... .....+...+..++|+|+++ ++++++
T Consensus 147 ~~~~~v~~~~~~~~~~-~l~~~~~d~~i~~wd~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~-~l~~~~ 211 (312)
T 4ery_A 147 AHSDPVSAVHFNRDGS-LIVSSSYDGLCRIWDTASGQCLK-------------TLIDDDNPPVSFVKFSPNGK-YILAAT 211 (312)
T ss_dssp CCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTCCEEE-------------EECCSSCCCEEEEEECTTSS-EEEEEE
T ss_pred CCCCcEEEEEEcCCCC-EEEEEeCCCcEEEEECCCCceee-------------EEeccCCCceEEEEECCCCC-EEEEEc
Confidence 9999999999999998 58999999999999998764322 12345667899999999999 788999
Q ss_pred CCCeEEEEeCCCCCCceeeeeeecccCCceeeee-cCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCC
Q psy4571 271 EDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTA-SPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTE 349 (437)
Q Consensus 271 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~ 349 (437)
.|+.|++||+++++....+....... ......+ .+++.++++|+.|+. |++||+.+++.+..+.+|.
T Consensus 212 ~d~~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~sg~~dg~-----------i~vwd~~~~~~~~~~~~h~ 279 (312)
T 4ery_A 212 LDNTLKLWDYSKGKCLKTYTGHKNEK-YCIFANFSVTGGKWIVSGSEDNL-----------VYIWNLQTKEIVQKLQGHT 279 (312)
T ss_dssp TTTEEEEEETTTTEEEEEECSSCCSS-SCCCEEEECSSSCEEEECCTTSC-----------EEEEETTTCCEEEEECCCS
T ss_pred CCCeEEEEECCCCcEEEEEEecCCce-EEEEEEEEeCCCcEEEEECCCCE-----------EEEEECCCchhhhhhhccC
Confidence 99999999999987766665322111 1222333 478889999999998 8999999999999999999
Q ss_pred ccccccCCCCCCccccc
Q psy4571 350 EESSDRHSSDNDTEDLN 366 (437)
Q Consensus 350 ~~~~~~~~~~~~~~~~~ 366 (437)
+.+..+.++|++..+++
T Consensus 280 ~~v~~~~~~p~~~~l~s 296 (312)
T 4ery_A 280 DVVISTACHPTENIIAS 296 (312)
T ss_dssp SCEEEEEECSSSSEEEE
T ss_pred CcEEEEeecCcCCceEE
Confidence 99999999999987664
No 17
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=4.1e-36 Score=278.93 Aligned_cols=276 Identities=13% Similarity=0.236 Sum_probs=223.7
Q ss_pred CcccccceeEEEEeeCCCcceEEEeeccCceEeeec----------------CCCceeEEEecCCCCeE-EEecCceEEE
Q psy4571 29 PLSHSIYRFYRLCVAEPFDDAVEERVINEEYKIWKK----------------NTPFLYDLVVNNYVANI-SCILNISILF 91 (437)
Q Consensus 29 ~~~~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~----------------~~~~~~~~~~~~~~~~i-~~~~~~~i~~ 91 (437)
.+.-+.-.|.+++|++..+++|++|+.|++|++|+. |...+..+.+++....+ +++.|++|++
T Consensus 12 ~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~ 91 (319)
T 3frx_A 12 TLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRL 91 (319)
T ss_dssp EECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred EEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEE
Confidence 345566789999999334589999999999999973 45667788888888766 7788999999
Q ss_pred EEeeecccc----ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCC-----
Q psy4571 92 FEIIFTQNF----PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSE----- 162 (437)
Q Consensus 92 ~~~~~~~~~----~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~----- 162 (437)
||+..++.. .+...|.+++|+| ++.+|++|+.||+|++||++ ...+..+.+|...|.+++|+|.+.
T Consensus 92 wd~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~s~D~~i~vwd~~----~~~~~~~~~h~~~v~~~~~~~~~~~~~~~ 166 (319)
T 3frx_A 92 WDVATGETYQRFVGHKSDVMSVDIDK-KASMIISGSRDKTIKVWTIK----GQCLATLLGHNDWVSQVRVVPNEKADDDS 166 (319)
T ss_dssp EETTTTEEEEEEECCSSCEEEEEECT-TSCEEEEEETTSCEEEEETT----SCEEEEECCCSSCEEEEEECCC------C
T ss_pred EECCCCCeeEEEccCCCcEEEEEEcC-CCCEEEEEeCCCeEEEEECC----CCeEEEEeccCCcEEEEEEccCCCCCCCc
Confidence 998765432 3678999999999 68899999999999999997 356778889999999999998532
Q ss_pred cEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCce
Q psy4571 163 YILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPEL 242 (437)
Q Consensus 163 ~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~ 242 (437)
..+++++.|+.|++||+++.+. ...+.+|...|.+++|+|+++ +|++|+.||.|++||+++.+ .
T Consensus 167 ~~l~s~~~d~~i~~wd~~~~~~-~~~~~~h~~~v~~~~~sp~g~-~l~s~~~dg~i~iwd~~~~~--------------~ 230 (319)
T 3frx_A 167 VTIISAGNDKMVKAWNLNQFQI-EADFIGHNSNINTLTASPDGT-LIASAGKDGEIMLWNLAAKK--------------A 230 (319)
T ss_dssp CEEEEEETTSCEEEEETTTTEE-EEEECCCCSCEEEEEECTTSS-EEEEEETTCEEEEEETTTTE--------------E
T ss_pred cEEEEEeCCCEEEEEECCcchh-heeecCCCCcEEEEEEcCCCC-EEEEEeCCCeEEEEECCCCc--------------E
Confidence 2599999999999999998554 777889999999999999998 59999999999999998753 3
Q ss_pred EEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeee-----ecccCCceeeeecCCCCcccccCCC
Q psy4571 243 LFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLD-----SIRSNGGISSTASPTASSTASESPT 317 (437)
Q Consensus 243 ~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-----~~~~~~~~~~~~s~~g~~l~s~s~d 317 (437)
+..+.. ...|.+++|+|++. ++++++. +.+++|+++.+.....+... ..+...+..++|+|||++|++|+.|
T Consensus 231 ~~~~~~-~~~v~~~~~sp~~~-~la~~~~-~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~D 307 (319)
T 3frx_A 231 MYTLSA-QDEVFSLAFSPNRY-WLAAATA-TGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTD 307 (319)
T ss_dssp EEEEEC-CSCEEEEEECSSSS-EEEEEET-TEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETT
T ss_pred EEEecC-CCcEEEEEEcCCCC-EEEEEcC-CCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecC
Confidence 344544 45899999999998 6766654 56999999876554444321 1123345678999999999999999
Q ss_pred Ccccccccccccccccccchhh
Q psy4571 318 PTNSVHEKNYWQGLVLFDILVC 339 (437)
Q Consensus 318 ~~~~~~~~~~~~~i~~wd~~~~ 339 (437)
+. |++||+.++
T Consensus 308 g~-----------i~vWd~~t~ 318 (319)
T 3frx_A 308 NV-----------IRVWQVMTA 318 (319)
T ss_dssp SC-----------EEEEEEEEC
T ss_pred ce-----------EEEEEEeec
Confidence 99 899998765
No 18
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1.2e-36 Score=307.43 Aligned_cols=318 Identities=16% Similarity=0.229 Sum_probs=252.2
Q ss_pred EEecCCcccccceeEEEEeeCCCcceEEEeeccCceEeeec-----------CCCceeEEEecCCCCeE-EEecCceEEE
Q psy4571 24 TWSALPLSHSIYRFYRLCVAEPFDDAVEERVINEEYKIWKK-----------NTPFLYDLVVNNYVANI-SCILNISILF 91 (437)
Q Consensus 24 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~-----------~~~~~~~~~~~~~~~~i-~~~~~~~i~~ 91 (437)
+|-..|.. ..-.+.+++|+ |++++|++++ ++.+++|+. |...+..+.++|++..+ ++..|++|++
T Consensus 9 ~~~~~~~~-~~g~~~~~~~s-pdg~~l~~~~-~~~v~l~~~~~~~~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~l 85 (611)
T 1nr0_A 9 LFPSLPRT-ARGTAVVLGNT-PAGDKIQYCN-GTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRI 85 (611)
T ss_dssp EECCCCCC-CTTCCCCCEEC-TTSSEEEEEE-TTEEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred EECCCCCc-ccCceeEEeeC-CCCCEEEeCC-CCEEEEecCCCcccCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEE
Confidence 34434433 34567789999 9999999998 569999994 34668888999998877 6678999999
Q ss_pred EEeeeccc------cccCCCcceEEeeCCCCCEEEEEECC----CcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCC
Q psy4571 92 FEIIFTQN------FPFPLSRQDVAWHLLHESLFGSVADD----QKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYS 161 (437)
Q Consensus 92 ~~~~~~~~------~~~~~~v~~~~~sp~~~~~l~~~~~d----g~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~ 161 (437)
||+...+. ..+...|.+++|+| ++..|++++.+ +.|++||.. .....+.+|...|.+++|+|++
T Consensus 86 Wd~~~~~~~~~~~~~~~~~~v~~v~fs~-dg~~l~~~~~~~~~~~~v~~wd~~-----~~~~~l~gh~~~v~~v~f~p~~ 159 (611)
T 1nr0_A 86 WDTTQTTHILKTTIPVFSGPVKDISWDS-ESKRIAAVGEGRERFGHVFLFDTG-----TSNGNLTGQARAMNSVDFKPSR 159 (611)
T ss_dssp EESSSTTCCEEEEEECSSSCEEEEEECT-TSCEEEEEECCSSCSEEEEETTTC-----CBCBCCCCCSSCEEEEEECSSS
T ss_pred eECCCCcceeeEeecccCCceEEEEECC-CCCEEEEEECCCCceeEEEEeeCC-----CCcceecCCCCCceEEEECCCC
Confidence 99753221 23567999999999 67788888765 478888743 3456778999999999999999
Q ss_pred CcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCc
Q psy4571 162 EYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPE 241 (437)
Q Consensus 162 ~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~ 241 (437)
.+.|++|+.|++|++||..+.+. ...+.+|...|.+++|+|+++ +|++|+.|++|++||+.+++........
T Consensus 160 ~~~l~s~s~D~~v~lwd~~~~~~-~~~l~~H~~~V~~v~fspdg~-~las~s~D~~i~lwd~~~g~~~~~~~~~------ 231 (611)
T 1nr0_A 160 PFRIISGSDDNTVAIFEGPPFKF-KSTFGEHTKFVHSVRYNPDGS-LFASTGGDGTIVLYNGVDGTKTGVFEDD------ 231 (611)
T ss_dssp SCEEEEEETTSCEEEEETTTBEE-EEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTCCEEEECBCT------
T ss_pred CeEEEEEeCCCeEEEEECCCCeE-eeeeccccCceEEEEECCCCC-EEEEEECCCcEEEEECCCCcEeeeeccc------
Confidence 86699999999999999988544 778899999999999999998 5999999999999999876543221000
Q ss_pred eEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCccc
Q psy4571 242 LLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNS 321 (437)
Q Consensus 242 ~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~ 321 (437)
.....+|.+.|.+++|+|+++ +|++++.|++|++||++++++...+............+.+ ++..+++++.++.
T Consensus 232 -~~~~~~h~~~V~~v~~spdg~-~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~s~s~d~~-- 305 (611)
T 1nr0_A 232 -SLKNVAHSGSVFGLTWSPDGT-KIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIW--TKQALVSISANGF-- 305 (611)
T ss_dssp -TSSSCSSSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEE--CSSCEEEEETTCC--
T ss_pred -cccccccCCCEEEEEECCCCC-EEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEE--cCCEEEEEeCCCc--
Confidence 000127999999999999999 7899999999999999998877776543222222333344 7889999999998
Q ss_pred ccccccccccccccchhhhhhhhhcCCCccccccCCCCCCcccccc-------ccccCH
Q psy4571 322 VHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHSSDNDTEDLNS-------IWSMTD 373 (437)
Q Consensus 322 ~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~-------~w~~~~ 373 (437)
+++||..+++....+.+|...+.++.++|+|..+++. +|++..
T Consensus 306 ---------i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~ 355 (611)
T 1nr0_A 306 ---------INFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDIST 355 (611)
T ss_dssp ---------EEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred ---------EEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCC
Confidence 8999999988888889999999999999999887764 888754
No 19
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.1e-37 Score=295.73 Aligned_cols=308 Identities=16% Similarity=0.196 Sum_probs=245.7
Q ss_pred ceeEEEEeeCCCcc-eEEEe----------eccCceEeeecC-------------CCceeEEEecCCCCeE-EEecCceE
Q psy4571 35 YRFYRLCVAEPFDD-AVEER----------VINEEYKIWKKN-------------TPFLYDLVVNNYVANI-SCILNISI 89 (437)
Q Consensus 35 ~~v~~~~~~~~~~~-~l~tg----------s~d~~v~iw~~~-------------~~~~~~~~~~~~~~~i-~~~~~~~i 89 (437)
..|.+++|+ |++. ++++| +.|+.|++|+.. .+.+..+.|++....+ ++..|+.|
T Consensus 13 ~~v~~~~~s-p~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v 91 (416)
T 2pm9_A 13 SRTATFAWS-HDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDNGSL 91 (416)
T ss_dssp EESCBCCBC-SSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESSSCE
T ss_pred hhcceEeeC-CCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEccCCeE
Confidence 467889999 8876 99999 899999999954 3457788898888777 55678999
Q ss_pred EEEEeee----cc----ccccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCC------CCCCeeeeccCCCCeEEE
Q psy4571 90 LFFEIIF----TQ----NFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHN------VSKPSHTVDAHTAEVNCL 155 (437)
Q Consensus 90 ~~~~~~~----~~----~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~------~~~~~~~~~~h~~~v~~l 155 (437)
++|++.. .. ...+...|.+++|+|+++.+|++++.||.|++||+.+.. ..........|...|.++
T Consensus 92 ~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 171 (416)
T 2pm9_A 92 ELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISL 171 (416)
T ss_dssp EEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEE
T ss_pred EEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEE
Confidence 9999865 11 123677999999999658899999999999999998653 112233446799999999
Q ss_pred EEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccC------CCceEEEEEcCCCCcEEEEEeCCC---eEEEEEcCCC
Q psy4571 156 SFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESH------KDEIFQVQWSPHNETILASSGTDR---RLHVWDLSKI 226 (437)
Q Consensus 156 ~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h------~~~v~~v~~~p~~~~~l~sg~~dg---~i~vwd~~~~ 226 (437)
+|+|++..+|++++.||.|++||+++++. +..+..| ...|.+++|+|++..++++++.|+ .|++||+++.
T Consensus 172 ~~~~~~~~~l~~~~~dg~v~iwd~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~ 250 (416)
T 2pm9_A 172 AWNQSLAHVFASAGSSNFASIWDLKAKKE-VIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNA 250 (416)
T ss_dssp EECSSCTTEEEEESSSSCEEEEETTTTEE-EEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTST
T ss_pred EeCCCCCcEEEEEcCCCCEEEEECCCCCc-ceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCC
Confidence 99999555799999999999999998655 6666655 788999999999866799999998 9999999986
Q ss_pred CCCCCCCCCCCCCCceEEEec-CccccEEEEEEcc-CCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeee
Q psy4571 227 GEEQSTEDAEDGPPELLFIHG-GHTAKISDFSWNP-NEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTA 304 (437)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~l~~~p-~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (437)
.... ..+. +|...|.+++|+| +++ ++++++.|+.|++||+++++++..+.. +...+..++|
T Consensus 251 ~~~~-------------~~~~~~~~~~v~~~~~s~~~~~-~l~s~~~dg~v~~wd~~~~~~~~~~~~---~~~~v~~~~~ 313 (416)
T 2pm9_A 251 NTPL-------------QTLNQGHQKGILSLDWCHQDEH-LLLSSGRDNTVLLWNPESAEQLSQFPA---RGNWCFKTKF 313 (416)
T ss_dssp TSCS-------------BCCCSCCSSCEEEEEECSSCSS-CEEEEESSSEEEEECSSSCCEEEEEEC---SSSCCCCEEE
T ss_pred CCCc-------------EEeecCccCceeEEEeCCCCCC-eEEEEeCCCCEEEeeCCCCccceeecC---CCCceEEEEE
Confidence 3221 2255 8999999999999 777 788999999999999999887776653 4566778899
Q ss_pred cCCC-CcccccCCCCcccccccccccccccccchhhhhhhhhc-----------------------------------CC
Q psy4571 305 SPTA-SSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLL-----------------------------------GT 348 (437)
Q Consensus 305 s~~g-~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~-----------------------------------~h 348 (437)
+|++ .++++++.|+. +++||+.+++...... .|
T Consensus 314 s~~~~~~l~s~~~d~~-----------i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (416)
T 2pm9_A 314 APEAPDLFACASFDNK-----------IEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWY 382 (416)
T ss_dssp CTTCTTEEEECCSSSE-----------EEEEESCCCCCSSCC----------------------CCSCCCSSCCCCCSTT
T ss_pred CCCCCCEEEEEecCCc-----------EEEEEccCCCCCcccccccccccCCcccccccccccccccccccccccCCccc
Confidence 9999 89999999999 6777776655432221 15
Q ss_pred CccccccCCCCCCcccccc-------ccccC
Q psy4571 349 EEESSDRHSSDNDTEDLNS-------IWSMT 372 (437)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~-------~w~~~ 372 (437)
..++..+.|+|+|..++.. +|++.
T Consensus 383 ~~~~~~~~~s~dg~~la~~~~d~~v~~w~~~ 413 (416)
T 2pm9_A 383 GEPSPAAHWAFGGKLVQITPDGKGVSITNPK 413 (416)
T ss_dssp CCCSCCCEEETTTEEECBCTTSSCBCCBCCC
T ss_pred cCCccceEEeeCCeEEEEeCCCCeEEEEEec
Confidence 6667788899999877764 77764
No 20
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=3.1e-37 Score=293.60 Aligned_cols=288 Identities=17% Similarity=0.194 Sum_probs=237.5
Q ss_pred eEeeecCCCceeEEEecCCCCeE-EEecCceEEEEEeeecccc----ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEc
Q psy4571 59 YKIWKKNTPFLYDLVVNNYVANI-SCILNISILFFEIIFTQNF----PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDT 133 (437)
Q Consensus 59 v~iw~~~~~~~~~~~~~~~~~~i-~~~~~~~i~~~~~~~~~~~----~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~ 133 (437)
.+.+..|.+.+..+.|++....+ +++.|++|++||....+.. .+...|.+++|+| ++.+|++|+.|+.+++||+
T Consensus 59 ~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~-~g~~las~~~d~~v~iw~~ 137 (380)
T 3iz6_a 59 CRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAP-NGQSVACGGLDSACSIFNL 137 (380)
T ss_dssp EEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECT-TSSEEEECCSSSCCEEEEC
T ss_pred eecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECC-CCCEEEEeeCCCcEEEEEC
Confidence 45677899999999999988766 7888999999997654432 3567899999999 6899999999999999999
Q ss_pred CCCC----CCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEe-----ccCCCceEEEEEcCC
Q psy4571 134 RSHN----VSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSF-----ESHKDEIFQVQWSPH 204 (437)
Q Consensus 134 ~~~~----~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~-----~~h~~~v~~v~~~p~ 204 (437)
.... .......+.+|.+.|.++.|+|++...|++|+.|++|++||+++++. +..+ .+|...|.+++|+|.
T Consensus 138 ~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~-~~~~~~~~~~~h~~~v~~~~~~~~ 216 (380)
T 3iz6_a 138 SSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQR-ISIFGSEFPSGHTADVLSLSINSL 216 (380)
T ss_dssp CCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCE-EEEECCCSSSSCCSCEEEEEECSS
T ss_pred CCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcE-EEEeecccCCCCccCeEEEEeecC
Confidence 7421 22345667899999999999998665699999999999999998665 5554 578999999999884
Q ss_pred CCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCC
Q psy4571 205 NETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDS 284 (437)
Q Consensus 205 ~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~ 284 (437)
+..+|++|+.|+.|++||++... ..+..+.+|...|.+++|+|+++ +|++|+.||+|++||+++++
T Consensus 217 ~~~~l~sgs~D~~v~~wd~~~~~-------------~~~~~~~~h~~~v~~v~~~p~~~-~l~s~s~D~~i~lwd~~~~~ 282 (380)
T 3iz6_a 217 NANMFISGSCDTTVRLWDLRITS-------------RAVRTYHGHEGDINSVKFFPDGQ-RFGTGSDDGTCRLFDMRTGH 282 (380)
T ss_dssp SCCEEEEEETTSCEEEEETTTTC-------------CCCEEECCCSSCCCEEEECTTSS-EEEEECSSSCEEEEETTTTE
T ss_pred CCCEEEEEECCCeEEEEECCCCC-------------cceEEECCcCCCeEEEEEecCCC-eEEEEcCCCeEEEEECCCCc
Confidence 43479999999999999998532 23455789999999999999999 78999999999999999988
Q ss_pred Cceeeeeeecc----cCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhh----cCCCccccccC
Q psy4571 285 DTKTMRLDSIR----SNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQL----LGTEEESSDRH 356 (437)
Q Consensus 285 ~~~~~~~~~~~----~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~----~~h~~~~~~~~ 356 (437)
++..+...... ...+..++|+|+|.++++|+.|+. +++||..+++.+..+ .+|...+.++.
T Consensus 283 ~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~-----------i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~ 351 (380)
T 3iz6_a 283 QLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGD-----------CYVWDTLLAEMVLNLGTLQNSHEGRISCLG 351 (380)
T ss_dssp EEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSC-----------EEEEETTTCCEEEEECCSCSSCCCCCCEEE
T ss_pred EEEEecccccccccccCceEEEEECCCCCEEEEEECCCC-----------EEEEECCCCceEEEEecccCCCCCceEEEE
Confidence 77666532211 123567799999999999999998 899999988877666 78999999999
Q ss_pred CCCCCcccccc-------ccccCH
Q psy4571 357 SSDNDTEDLNS-------IWSMTD 373 (437)
Q Consensus 357 ~~~~~~~~~~~-------~w~~~~ 373 (437)
++|+|..++++ +|++.+
T Consensus 352 ~s~dg~~l~sgs~D~~i~iW~~~~ 375 (380)
T 3iz6_a 352 LSSDGSALCTGSWDKNLKIWAFSG 375 (380)
T ss_dssp ECSSSSEEEEECTTSCEEEEECCS
T ss_pred ECCCCCEEEEeeCCCCEEEEecCC
Confidence 99999988775 787754
No 21
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.2e-36 Score=279.58 Aligned_cols=283 Identities=12% Similarity=0.158 Sum_probs=212.3
Q ss_pred ccccceeEEEEeeCCCcceEEEeeccCceEeeecC---------------CCceeEEEecCCCCeE-EEecCceEEEEEe
Q psy4571 31 SHSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKN---------------TPFLYDLVVNNYVANI-SCILNISILFFEI 94 (437)
Q Consensus 31 ~~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~---------------~~~~~~~~~~~~~~~i-~~~~~~~i~~~~~ 94 (437)
.-+.-.|.+++|+ |+ +|++|+.|++|++|+.. .+.+..+.|++....+ +++.|+.|++|+.
T Consensus 11 ~~h~~~v~~~~~s-~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~ 87 (330)
T 2hes_X 11 KLYKEKIWSFDFS-QG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAK 87 (330)
T ss_dssp ECCSSCEEEEEEE-TT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC
T ss_pred ccCCCceeeeccC-CC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEc
Confidence 3455678999999 65 99999999999999843 3457778888887766 6678999999997
Q ss_pred eecc-----------ccccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCC-CCCCCeeeeccCCCCeEEEEEeCCCC
Q psy4571 95 IFTQ-----------NFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSH-NVSKPSHTVDAHTAEVNCLSFNPYSE 162 (437)
Q Consensus 95 ~~~~-----------~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~-~~~~~~~~~~~h~~~v~~l~~~~~~~ 162 (437)
.... ...+...|.+++|+| ++.+|++|+.|++|++||+... ...+.+..+.+|...|.+++|+|++.
T Consensus 88 ~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp-~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~ 166 (330)
T 2hes_X 88 EESADRTFEMDLLAIIEGHENEVKGVAWSN-DGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEA 166 (330)
T ss_dssp -------CCCEEEEEEC----CEEEEEECT-TSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSS
T ss_pred ccCcCccccceeEEEEcCCCCcEEEEEECC-CCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCC
Confidence 4211 123667899999999 6889999999999999999532 23345677889999999999999998
Q ss_pred cEEEEEeCCCeEEEEeCCCCc-eeeeEeccCCCceEEEEEcCC--CCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCC
Q psy4571 163 YILATGSADKTVALWDLRNLK-LKLHSFESHKDEIFQVQWSPH--NETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGP 239 (437)
Q Consensus 163 ~~l~sgs~dg~i~lwd~~~~~-~~~~~~~~h~~~v~~v~~~p~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~ 239 (437)
+|++|+.|++|++||..++. .++..+.+|.+.|.+++|+|+ +. .|++|+.|++|++||++....... ..
T Consensus 167 -~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~-~l~s~s~D~~v~iw~~~~~~~~~~------~~ 238 (330)
T 2hes_X 167 -LLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVF-RLCSGSDDSTVRVWKYMGDDEDDQ------QE 238 (330)
T ss_dssp -EEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSC-EEEEEETTSCEEEEEEEEECTTSC------EE
T ss_pred -EEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCee-EEEEEeCCCeEEEEEecCCCcccc------ce
Confidence 49999999999999987643 457788999999999999998 54 589999999999999976432111 00
Q ss_pred CceEEEecC-ccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccC-CceeeeecC--CCCcccccC
Q psy4571 240 PELLFIHGG-HTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSN-GGISSTASP--TASSTASES 315 (437)
Q Consensus 240 ~~~~~~~~~-h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~~~s~--~g~~l~s~s 315 (437)
......+.+ |...|.+++|++++ ++++++.||.|++||..+++..........+.. .+..++|+| ++.+|++|+
T Consensus 239 ~~~~~~~~~~h~~~v~~v~~s~~~--~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s 316 (330)
T 2hes_X 239 WVCEAILPDVHKRQVYNVAWGFNG--LIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGG 316 (330)
T ss_dssp EEEEEECCSCCSSCEEEEEECTTS--CEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEE
T ss_pred eEEeeecccccccceEEEEEcCCC--EEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEec
Confidence 122333444 89999999999765 588999999999999987632111111122333 566779999 799999999
Q ss_pred CCCcccccccccccccccccchh
Q psy4571 316 PTPTNSVHEKNYWQGLVLFDILV 338 (437)
Q Consensus 316 ~d~~~~~~~~~~~~~i~~wd~~~ 338 (437)
.|++ |++||+..
T Consensus 317 ~Dg~-----------v~~W~~~~ 328 (330)
T 2hes_X 317 DDGI-----------VNFWSLEK 328 (330)
T ss_dssp TTSE-----------EEEEEC--
T ss_pred CCCc-----------EEEEEecc
Confidence 9999 78888754
No 22
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=5.6e-37 Score=297.20 Aligned_cols=301 Identities=15% Similarity=0.159 Sum_probs=230.2
Q ss_pred cceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeC
Q psy4571 34 IYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHL 113 (437)
Q Consensus 34 ~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp 113 (437)
..+|++++|++.++.+|++|+.||+|++|+..++...... ....|...|++++|+|
T Consensus 119 ~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~------------------------~~~gH~~~V~~l~f~p 174 (435)
T 4e54_B 119 DRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFI------------------------KGIGAGGSITGLKFNP 174 (435)
T ss_dssp SSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEE------------------------CCCSSSCCCCEEEECS
T ss_pred CCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEE------------------------EccCCCCCEEEEEEeC
Confidence 3459999999336789999999999999998765433221 1123567899999999
Q ss_pred CCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCC
Q psy4571 114 LHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHK 193 (437)
Q Consensus 114 ~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~ 193 (437)
.++.+|++|+.||+|++||++... ...+.....+...+.+++|+|++. +|++|+.||.|++||++. +. +..+.+|.
T Consensus 175 ~~~~~l~s~s~D~~v~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~l~~g~~dg~i~~wd~~~-~~-~~~~~~h~ 250 (435)
T 4e54_B 175 LNTNQFYASSMEGTTRLQDFKGNI-LRVFASSDTINIWFCSLDVSASSR-MVVTGDNVGNVILLNMDG-KE-LWNLRMHK 250 (435)
T ss_dssp SCTTEEEEECSSSCEEEEETTSCE-EEEEECCSSCSCCCCCEEEETTTT-EEEEECSSSBEEEEESSS-CB-CCCSBCCS
T ss_pred CCCCEEEEEeCCCEEEEeeccCCc-eeEEeccCCCCccEEEEEECCCCC-EEEEEeCCCcEeeeccCc-ce-eEEEeccc
Confidence 778999999999999999997321 111222223445688999999999 599999999999999985 33 67788999
Q ss_pred CceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCC
Q psy4571 194 DEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273 (437)
Q Consensus 194 ~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg 273 (437)
..|++++|+|+++.++++|+.|+.|++||++....... +....+|...|++++|+|+|. +|++++.||
T Consensus 251 ~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~-----------~~~~~~h~~~v~~~~~spdg~-~l~s~~~D~ 318 (435)
T 4e54_B 251 KKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKAS-----------FLYSLPHRHPVNAACFSPDGA-RLLTTDQKS 318 (435)
T ss_dssp SCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSC-----------CSBCCBCSSCEEECCBCTTSS-EEEEEESSS
T ss_pred ceEEeeeecCCCceEEEEecCcceeeEEecccccccce-----------EEEeeeccccccceeECCCCC-eeEEEcCCC
Confidence 99999999999988899999999999999988654433 122457999999999999999 788999999
Q ss_pred eEEEEeCCCCCCceeeeeeec---ccCCceeeeecCCCCcccccC-CCCcccccccccccccccccchhhhhhhhhc-CC
Q psy4571 274 IMQEYCDSTDSDTKTMRLDSI---RSNGGISSTASPTASSTASES-PTPTNSVHEKNYWQGLVLFDILVCEEQRQLL-GT 348 (437)
Q Consensus 274 ~i~iwd~~~~~~~~~~~~~~~---~~~~~~~~~~s~~g~~l~s~s-~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~-~h 348 (437)
.|++||+.++.....+..... .........|+|++..++++. .++...++.....+.|++||..+|+.+..+. +|
T Consensus 319 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~ 398 (435)
T 4e54_B 319 EIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPE 398 (435)
T ss_dssp CEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSS
T ss_pred EEEEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCC
Confidence 999999999877665543221 112344557888888777664 4555555555555569999999999888764 67
Q ss_pred Ccccccc-CCCCCCcccccc------ccccCHH
Q psy4571 349 EEESSDR-HSSDNDTEDLNS------IWSMTDE 374 (437)
Q Consensus 349 ~~~~~~~-~~~~~~~~~~~~------~w~~~~~ 374 (437)
...+..+ .|+|+|..++++ +|++...
T Consensus 399 ~~~v~s~~~fspdg~~lasg~d~~i~iW~~~~g 431 (435)
T 4e54_B 399 SSGISSLNEFNPMGDTLASAMGYHILIWSQQEA 431 (435)
T ss_dssp CCCCCCEEEECTTSSCEEEECSSEEEECCCC--
T ss_pred CCcEEEEEEECCCCCEEEEEcCCcEEEEECCcC
Confidence 7777776 589999887764 8988554
No 23
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=2.6e-35 Score=276.33 Aligned_cols=278 Identities=14% Similarity=0.235 Sum_probs=216.1
Q ss_pred cccccceeEEEEe-----eCCCcceEEEeeccCceEeeecC------------------CCceeEEEecCCCCeE-EEec
Q psy4571 30 LSHSIYRFYRLCV-----AEPFDDAVEERVINEEYKIWKKN------------------TPFLYDLVVNNYVANI-SCIL 85 (437)
Q Consensus 30 ~~~~~~~v~~~~~-----~~~~~~~l~tgs~d~~v~iw~~~------------------~~~~~~~~~~~~~~~i-~~~~ 85 (437)
+.-+...|.+++| +++++.+|++|+.|++|++|+.. ...+..+.+++....+ +++.
T Consensus 17 l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~ 96 (343)
T 2xzm_R 17 LEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSW 96 (343)
T ss_dssp EECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEET
T ss_pred eccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcC
Confidence 3445667999999 63489999999999999999853 3456778888877765 7788
Q ss_pred CceEEEEEeeecccc----ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCC
Q psy4571 86 NISILFFEIIFTQNF----PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYS 161 (437)
Q Consensus 86 ~~~i~~~~~~~~~~~----~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~ 161 (437)
|++|++||+..++.. .+...|.+++|+| ++.+|++|+.|++|++||+... .........+|...|.+++|+|++
T Consensus 97 D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp-~~~~l~s~~~d~~i~~wd~~~~-~~~~~~~~~~~~~~v~~~~~~~~~ 174 (343)
T 2xzm_R 97 DKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSP-DNRQILSAGAEREIKLWNILGE-CKFSSAEKENHSDWVSCVRYSPIM 174 (343)
T ss_dssp TSEEEEEETTSSCEEEEEECCCSCEEEEEECS-STTEEEEEETTSCEEEEESSSC-EEEECCTTTSCSSCEEEEEECCCC
T ss_pred CCcEEEEECCCCcEEEEEcCCCCcEEEEEECC-CCCEEEEEcCCCEEEEEeccCC-ceeeeecccCCCceeeeeeecccc
Confidence 999999998755432 3678999999999 6889999999999999999721 111111123788999999999987
Q ss_pred ----------CcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCC
Q psy4571 162 ----------EYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQS 231 (437)
Q Consensus 162 ----------~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~ 231 (437)
. +|++++.||.|++||.. ......+.+|...|.+++|+|+++ .|++|+.||.|++||+.......
T Consensus 175 ~~~~~~~~~~~-~l~s~~~d~~i~iwd~~--~~~~~~~~~h~~~v~~~~~s~~g~-~l~sgs~dg~v~iwd~~~~~~~~- 249 (343)
T 2xzm_R 175 KSANKVQPFAP-YFASVGWDGRLKVWNTN--FQIRYTFKAHESNVNHLSISPNGK-YIATGGKDKKLLIWDILNLTYPQ- 249 (343)
T ss_dssp CSCSCCCSSCC-EEEEEETTSEEEEEETT--TEEEEEEECCSSCEEEEEECTTSS-EEEEEETTCEEEEEESSCCSSCS-
T ss_pred ccccccCCCCC-EEEEEcCCCEEEEEcCC--CceeEEEcCccccceEEEECCCCC-EEEEEcCCCeEEEEECCCCcccc-
Confidence 5 59999999999999954 333667889999999999999998 59999999999999995433211
Q ss_pred CCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeee----------ecccCCcee
Q psy4571 232 TEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLD----------SIRSNGGIS 301 (437)
Q Consensus 232 ~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~----------~~~~~~~~~ 301 (437)
..+ .+...|.+++|+|+++ +++ ++.|+.|++||+.+++........ ..+...+..
T Consensus 250 ------------~~~-~~~~~v~~v~~sp~~~-~la-~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 314 (343)
T 2xzm_R 250 ------------REF-DAGSTINQIAFNPKLQ-WVA-VGTDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTS 314 (343)
T ss_dssp ------------EEE-ECSSCEEEEEECSSSC-EEE-EEESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEE
T ss_pred ------------eee-cCCCcEEEEEECCCCC-EEE-EECCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEE
Confidence 112 2345799999999998 554 556888999999987765522221 123345667
Q ss_pred eeecCCCCcccccCCCCcccccccccccccccccchhhh
Q psy4571 302 STASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCE 340 (437)
Q Consensus 302 ~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~ 340 (437)
++|+|+|.+|++|+.|+. |++||+.+|+
T Consensus 315 ~~~sp~g~~l~sg~~Dg~-----------v~~w~~~~g~ 342 (343)
T 2xzm_R 315 LAWNALGKKLFAGFTDGV-----------IRTFSFETSA 342 (343)
T ss_dssp EEECSSSCCEEEEETTSE-----------EEEEEEEEEE
T ss_pred EEECCCCCeEEEecCCce-----------EEEEEEEccC
Confidence 899999999999999999 8999987764
No 24
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=9.1e-37 Score=281.35 Aligned_cols=238 Identities=15% Similarity=0.197 Sum_probs=204.9
Q ss_pred cCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCC
Q psy4571 102 FPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRN 181 (437)
Q Consensus 102 ~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~ 181 (437)
+...|.+++|+| ++.+|++|+.||+|++||+. ....+..+..|..+|.+++|+|++.. |++|+.|++|++||+++
T Consensus 12 h~~~V~~~~fsp-~~~~l~s~~~dg~v~lWd~~---~~~~~~~~~~~~~~v~~~~~~~~~~~-l~s~s~d~~i~vwd~~~ 86 (304)
T 2ynn_A 12 RSDRVKGIDFHP-TEPWVLTTLYSGRVELWNYE---TQVEVRSIQVTETPVRAGKFIARKNW-IIVGSDDFRIRVFNYNT 86 (304)
T ss_dssp ECSCEEEEEECS-SSSEEEEEETTSEEEEEETT---TTEEEEEEECCSSCEEEEEEEGGGTE-EEEEETTSEEEEEETTT
T ss_pred CCCceEEEEECC-CCCEEEEEcCCCcEEEEECC---CCceeEEeeccCCcEEEEEEeCCCCE-EEEECCCCEEEEEECCC
Confidence 567899999999 68899999999999999998 55677888899999999999999995 99999999999999999
Q ss_pred CceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccC
Q psy4571 182 LKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPN 261 (437)
Q Consensus 182 ~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~ 261 (437)
++. +..+.+|...|.+++|+|+++ +|++|+.|++|++||+++.. .....+.+|...|.+++|+|.
T Consensus 87 ~~~-~~~~~~h~~~v~~~~~~~~~~-~l~sgs~D~~v~lWd~~~~~-------------~~~~~~~~h~~~v~~v~~~p~ 151 (304)
T 2ynn_A 87 GEK-VVDFEAHPDYIRSIAVHPTKP-YVLSGSDDLTVKLWNWENNW-------------ALEQTFEGHEHFVMCVAFNPK 151 (304)
T ss_dssp CCE-EEEEECCSSCEEEEEECSSSS-EEEEEETTSCEEEEEGGGTT-------------EEEEEECCCCSCEEEEEECTT
T ss_pred CcE-EEEEeCCCCcEEEEEEcCCCC-EEEEECCCCeEEEEECCCCc-------------chhhhhcccCCcEEEEEECCC
Confidence 665 788899999999999999998 59999999999999997642 334567899999999999995
Q ss_pred CCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecC--CCCcccccCCCCcccccccccccccccccchhh
Q psy4571 262 EPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASP--TASSTASESPTPTNSVHEKNYWQGLVLFDILVC 339 (437)
Q Consensus 262 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~--~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~ 339 (437)
+..++++|+.|+.|++||++++.....+.. .+...+..+.++| ++.++++|+.|++ |++||+.++
T Consensus 152 ~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~l~s~s~D~~-----------i~iWd~~~~ 218 (304)
T 2ynn_A 152 DPSTFASGCLDRTVKVWSLGQSTPNFTLTT--GQERGVNYVDYYPLPDKPYMITASDDLT-----------IKIWDYQTK 218 (304)
T ss_dssp CTTEEEEEETTSEEEEEETTCSSCSEEEEC--CCTTCEEEEEECCSTTCCEEEEEETTSE-----------EEEEETTTT
T ss_pred CCCEEEEEeCCCeEEEEECCCCCccceecc--CCcCcEEEEEEEEcCCCCEEEEEcCCCe-----------EEEEeCCCC
Confidence 444899999999999999988776655542 2334455566665 7889999999999 899999999
Q ss_pred hhhhhhcCCCccccccCCCCCCcccccc-------ccccC
Q psy4571 340 EEQRQLLGTEEESSDRHSSDNDTEDLNS-------IWSMT 372 (437)
Q Consensus 340 ~~~~~~~~h~~~~~~~~~~~~~~~~~~~-------~w~~~ 372 (437)
+.+..+.+|...+..+.++|++..+++. +|+..
T Consensus 219 ~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~ 258 (304)
T 2ynn_A 219 SCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSS 258 (304)
T ss_dssp EEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETT
T ss_pred ccceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECC
Confidence 9999999999999999999999866654 67764
No 25
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=2.1e-35 Score=296.34 Aligned_cols=299 Identities=20% Similarity=0.323 Sum_probs=252.2
Q ss_pred ccceeEEEEeeCCCcceEEEeeccCceEeeecC----------CCceeEEEecCCCCeE-EEecCceEEEEEeeecc---
Q psy4571 33 SIYRFYRLCVAEPFDDAVEERVINEEYKIWKKN----------TPFLYDLVVNNYVANI-SCILNISILFFEIIFTQ--- 98 (437)
Q Consensus 33 ~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~----------~~~~~~~~~~~~~~~i-~~~~~~~i~~~~~~~~~--- 98 (437)
+...|.+++|+ |++..+++++.|+.+++|+.. ...+..+.+.+....+ ++..++.+++|+.....
T Consensus 220 ~~~~v~~~~~s-~dg~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~~~~~~~ 298 (577)
T 2ymu_A 220 HSSSVRGVAFS-PDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRNGQLLQT 298 (577)
T ss_dssp CSSCEEEEEEC-TTSSCEEEEETTSCEEEECTTSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEE
T ss_pred CCCCEEEEEEC-CCCCEEEEEeCCCEEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCCCcEEEE
Confidence 35568999999 999999999999999999943 4556777888887766 66788999999953221
Q ss_pred ccccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEe
Q psy4571 99 NFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWD 178 (437)
Q Consensus 99 ~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd 178 (437)
...+...|.+++|+| ++..|++++.||.|++||.. ...+..+.+|...|.+++|+|++.. |++|+.||.|++||
T Consensus 299 ~~~h~~~v~~~~~~~-~~~~l~t~~~d~~i~~w~~~----~~~~~~~~~~~~~v~~~~~s~~g~~-l~~~~~dg~v~~~~ 372 (577)
T 2ymu_A 299 LTGHSSSVWGVAFSP-DGQTIASASDDKTVKLWNRN----GQHLQTLTGHSSSVWGVAFSPDGQT-IASASDDKTVKLWN 372 (577)
T ss_dssp ECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETT----SCEEEEECCCSSCEEEEEECTTSSE-EEEEETTSEEEEEE
T ss_pred EecCCCCeEEEEECC-CCCEEEEEeCCCeEEEEeCC----CCeeEEEeCCCCCEEEEEECCCCCE-EEEEeCCCEEEEEc
Confidence 123567899999999 68899999999999999986 3556778899999999999999995 99999999999999
Q ss_pred CCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEE
Q psy4571 179 LRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 258 (437)
Q Consensus 179 ~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~ 258 (437)
... +. +..+.+|...|.+++|+|++++ |++++.|+.|++||... +.+..+.+|...|++++|
T Consensus 373 ~~~-~~-~~~~~~~~~~v~~~~~s~dg~~-l~~~~~d~~v~~~~~~~---------------~~~~~~~~~~~~v~~~~~ 434 (577)
T 2ymu_A 373 RNG-QL-LQTLTGHSSSVRGVAFSPDGQT-IASASDDKTVKLWNRNG---------------QLLQTLTGHSSSVWGVAF 434 (577)
T ss_dssp TTC-CE-EEEEECCSSCEEEEEECTTSSC-EEEEETTSEEEEECTTC---------------CEEEEEECCSSCEEEEEE
T ss_pred CCC-CE-EEEecCCCCCeEEEEECCCCCE-EEEEeCCCEEEEEeCCC---------------CEEEEecCCCCCeEEEEE
Confidence 653 43 7788899999999999999985 89999999999999643 345668899999999999
Q ss_pred ccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchh
Q psy4571 259 NPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILV 338 (437)
Q Consensus 259 ~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~ 338 (437)
+|+++ ++++++.|+.|++||.. ++....+. .+...+..++|+|+|+++++++.|+. |++||. +
T Consensus 435 s~d~~-~l~~~~~d~~v~~w~~~-~~~~~~~~---~~~~~v~~~~~spd~~~las~~~d~~-----------i~iw~~-~ 497 (577)
T 2ymu_A 435 SPDDQ-TIASASDDKTVKLWNRN-GQLLQTLT---GHSSSVRGVAFSPDGQTIASASDDKT-----------VKLWNR-N 497 (577)
T ss_dssp CTTSS-EEEEEETTSEEEEEETT-SCEEEEEE---CCSSCEEEEEECTTSCEEEEEETTSE-----------EEEEET-T
T ss_pred CCCCC-EEEEEcCCCEEEEEECC-CCEEEEEc---CCCCCEEEEEEcCCCCEEEEEeCCCE-----------EEEEcC-C
Confidence 99999 78899999999999974 44444443 25566778899999999999999998 899994 7
Q ss_pred hhhhhhhcCCCccccccCCCCCCcccccc-------ccccCH
Q psy4571 339 CEEQRQLLGTEEESSDRHSSDNDTEDLNS-------IWSMTD 373 (437)
Q Consensus 339 ~~~~~~~~~h~~~~~~~~~~~~~~~~~~~-------~w~~~~ 373 (437)
++.++.+.+|...+..+.++|+|..+++. +|+.++
T Consensus 498 ~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~~ 539 (577)
T 2ymu_A 498 GQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG 539 (577)
T ss_dssp SCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTS
T ss_pred CCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeCCC
Confidence 88889999999999999999999987764 888654
No 26
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=2e-35 Score=277.35 Aligned_cols=288 Identities=16% Similarity=0.212 Sum_probs=226.8
Q ss_pred eeecCCC-ceeEEEecCCCCeE-EEecCceEEEEEeeecc-------ccccCCCcceEEeeCCCCCEEEEEECCCcEEEE
Q psy4571 61 IWKKNTP-FLYDLVVNNYVANI-SCILNISILFFEIIFTQ-------NFPFPLSRQDVAWHLLHESLFGSVADDQKLMIW 131 (437)
Q Consensus 61 iw~~~~~-~~~~~~~~~~~~~i-~~~~~~~i~~~~~~~~~-------~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vw 131 (437)
....|.+ .+..+.|++.+..+ +++.|+.|++||..... ...+...|.+++|+| ++.+|++|+.|++|++|
T Consensus 10 ~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp-~g~~l~s~s~D~~v~iw 88 (345)
T 3fm0_A 10 RVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSP-CGNYLASASFDATTCIW 88 (345)
T ss_dssp EECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECT-TSSEEEEEETTSCEEEE
T ss_pred eecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECC-CCCEEEEEECCCcEEEE
Confidence 3445655 88899999998877 67789999999976542 124677899999999 68899999999999999
Q ss_pred EcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCc--eeeeEeccCCCceEEEEEcCCCCcEE
Q psy4571 132 DTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLK--LKLHSFESHKDEIFQVQWSPHNETIL 209 (437)
Q Consensus 132 d~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~--~~~~~~~~h~~~v~~v~~~p~~~~~l 209 (437)
|.... ....+..+.+|...|.+++|+|++.. |++|+.|++|++||+++.. .++..+.+|...|.+++|+|+++ +|
T Consensus 89 ~~~~~-~~~~~~~~~~h~~~v~~v~~sp~~~~-l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~-~l 165 (345)
T 3fm0_A 89 KKNQD-DFECVTTLEGHENEVKSVAWAPSGNL-LATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQE-LL 165 (345)
T ss_dssp EECCC--EEEEEEECCCSSCEEEEEECTTSSE-EEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSS-CE
T ss_pred EccCC-CeEEEEEccCCCCCceEEEEeCCCCE-EEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCC-EE
Confidence 98743 12456788899999999999999995 9999999999999998754 23566788999999999999998 49
Q ss_pred EEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCcee-
Q psy4571 210 ASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKT- 288 (437)
Q Consensus 210 ~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~- 288 (437)
++|+.|+.|++||.+.... .....+.+|...|.+++|+|+++ +|++++.|++|++||.........
T Consensus 166 ~s~s~d~~i~~w~~~~~~~------------~~~~~~~~h~~~v~~l~~sp~g~-~l~s~s~D~~v~iW~~~~~~~~~~~ 232 (345)
T 3fm0_A 166 ASASYDDTVKLYREEEDDW------------VCCATLEGHESTVWSLAFDPSGQ-RLASCSDDRTVRIWRQYLPGNEQGV 232 (345)
T ss_dssp EEEETTSCEEEEEEETTEE------------EEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEEEECTTCTTCC
T ss_pred EEEeCCCcEEEEEecCCCE------------EEEEEecCCCCceEEEEECCCCC-EEEEEeCCCeEEEeccccCCCCccc
Confidence 9999999999999876421 23456889999999999999999 789999999999999743322111
Q ss_pred -----------e-eeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhh---------hhhcC
Q psy4571 289 -----------M-RLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQ---------RQLLG 347 (437)
Q Consensus 289 -----------~-~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~---------~~~~~ 347 (437)
+ .....+...+..++|+|++..+++++.|+. +++||...+... ....+
T Consensus 233 ~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~-----------i~vw~~~~~~~~~~~~~~~~~~~~~~ 301 (345)
T 3fm0_A 233 ACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDA-----------IRVFQEDPNSDPQQPTFSLTAHLHQA 301 (345)
T ss_dssp CCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSC-----------EEEEEECTTSCTTSCCEEEEEEETTS
T ss_pred eeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCe-----------EEEEEeCCCCCcceeeEEEEeeeccc
Confidence 1 111224456777899999999999999998 788877655321 22468
Q ss_pred CCccccccCCCCCCc-ccccc-------ccccCHHHH
Q psy4571 348 TEEESSDRHSSDNDT-EDLNS-------IWSMTDEQR 376 (437)
Q Consensus 348 h~~~~~~~~~~~~~~-~~~~~-------~w~~~~~~~ 376 (437)
|.+.+.++.|+|++. .++++ +|+....++
T Consensus 302 h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~~ 338 (345)
T 3fm0_A 302 HSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEG 338 (345)
T ss_dssp SSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC---
T ss_pred ccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCCC
Confidence 999999999999875 45443 899865544
No 27
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1.1e-34 Score=277.19 Aligned_cols=279 Identities=15% Similarity=0.185 Sum_probs=218.7
Q ss_pred ccceeEEEEeeCCCcceEEEeeccCceEeeecCCCc-----------------------------eeEEEecCCCCeE-E
Q psy4571 33 SIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPF-----------------------------LYDLVVNNYVANI-S 82 (437)
Q Consensus 33 ~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~-----------------------------~~~~~~~~~~~~i-~ 82 (437)
+...|.+++|+ |++++|++|+ |+++++|+..++. +..+.|++++..+ +
T Consensus 63 h~~~V~~v~fs-pdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s 140 (393)
T 1erj_A 63 HTSVVCCVKFS-NDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLAT 140 (393)
T ss_dssp CSSCCCEEEEC-TTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEE
T ss_pred CCCEEEEEEEC-CCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEE
Confidence 45568899999 9999999987 7899999965432 5577888887766 6
Q ss_pred EecCceEEEEEeeeccc----cccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEe
Q psy4571 83 CILNISILFFEIIFTQN----FPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFN 158 (437)
Q Consensus 83 ~~~~~~i~~~~~~~~~~----~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~ 158 (437)
+..|+.|++||+...+. ..+...|.+++|+| ++.+|++|+.|++|++||+++ .+....+ .+...+.+++|+
T Consensus 141 ~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p-~~~~l~s~s~d~~v~iwd~~~---~~~~~~~-~~~~~v~~~~~~ 215 (393)
T 1erj_A 141 GAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFP-SGDKLVSGSGDRTVRIWDLRT---GQCSLTL-SIEDGVTTVAVS 215 (393)
T ss_dssp EETTSCEEEEETTTTEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTT---TEEEEEE-ECSSCEEEEEEC
T ss_pred EcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcC-CCCEEEEecCCCcEEEEECCC---CeeEEEE-EcCCCcEEEEEE
Confidence 67899999999765443 23677899999999 678999999999999999983 4444444 356789999999
Q ss_pred C-CCCcEEEEEeCCCeEEEEeCCCCceeeeEe-------ccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCC
Q psy4571 159 P-YSEYILATGSADKTVALWDLRNLKLKLHSF-------ESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQ 230 (437)
Q Consensus 159 ~-~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~-------~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~ 230 (437)
| ++. +|++|+.||.|++||++++.. +..+ .+|...|.+++|+|+++ .|++|+.|+.|++||++......
T Consensus 216 ~~~~~-~l~~~s~d~~v~iwd~~~~~~-~~~~~~~~~~~~~h~~~v~~v~~~~~g~-~l~s~s~d~~v~~wd~~~~~~~~ 292 (393)
T 1erj_A 216 PGDGK-YIAAGSLDRAVRVWDSETGFL-VERLDSENESGTGHKDSVYSVVFTRDGQ-SVVSGSLDRSVKLWNLQNANNKS 292 (393)
T ss_dssp STTCC-EEEEEETTSCEEEEETTTCCE-EEEEC------CCCSSCEEEEEECTTSS-EEEEEETTSEEEEEEC-------
T ss_pred CCCCC-EEEEEcCCCcEEEEECCCCcE-EEeecccccCCCCCCCCEEEEEECCCCC-EEEEEeCCCEEEEEECCCCCCcc
Confidence 9 677 599999999999999998654 4444 57899999999999998 58999999999999998754322
Q ss_pred CCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecC----
Q psy4571 231 STEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASP---- 306 (437)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~---- 306 (437)
... ......+...+.+|...|.+++|+|++. ++++|+.|+.|++||+++++++..+.. |...+..+++++
T Consensus 293 ~~~--~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~sgs~D~~v~iwd~~~~~~~~~l~~---h~~~v~~v~~~~~~~~ 366 (393)
T 1erj_A 293 DSK--TPNSGTCEVTYIGHKDFVLSVATTQNDE-YILSGSKDRGVLFWDKKSGNPLLMLQG---HRNSVISVAVANGSSL 366 (393)
T ss_dssp ----------CEEEEEECCSSCEEEEEECGGGC-EEEEEETTSEEEEEETTTCCEEEEEEC---CSSCEEEEEECSSCTT
T ss_pred ccc--CCCCCcceEEEecccCcEEEEEECCCCC-EEEEEeCCCeEEEEECCCCeEEEEECC---CCCCEEEEEecCCcCc
Confidence 111 0111234566789999999999999999 788999999999999999987766653 556666777665
Q ss_pred --CCCcccccCCCCcccccccccccccccccchh
Q psy4571 307 --TASSTASESPTPTNSVHEKNYWQGLVLFDILV 338 (437)
Q Consensus 307 --~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~ 338 (437)
++.++++|+.|++ +++||+..
T Consensus 367 ~p~~~~l~sgs~Dg~-----------i~iW~~~~ 389 (393)
T 1erj_A 367 GPEYNVFATGSGDCK-----------ARIWKYKK 389 (393)
T ss_dssp CTTCEEEEEEETTSE-----------EEEEEEEE
T ss_pred CCCCCEEEEECCCCc-----------EEECcccc
Confidence 7889999999999 78888754
No 28
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1e-34 Score=269.47 Aligned_cols=273 Identities=17% Similarity=0.262 Sum_probs=225.5
Q ss_pred eeecCCCceeEEEecCCC-C-eEEEecCceEEEEEeeecc---------ccccCCCcceEEeeCCCCCEEEEEECCCcEE
Q psy4571 61 IWKKNTPFLYDLVVNNYV-A-NISCILNISILFFEIIFTQ---------NFPFPLSRQDVAWHLLHESLFGSVADDQKLM 129 (437)
Q Consensus 61 iw~~~~~~~~~~~~~~~~-~-~i~~~~~~~i~~~~~~~~~---------~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~ 129 (437)
....|.+.+..+.+.+.. . .++++.|++|++|++.... ...+...|.+++|+| ++.+|++|+.|++|+
T Consensus 12 ~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~-dg~~l~s~s~D~~v~ 90 (319)
T 3frx_A 12 TLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTA-DGAYALSASWDKTLR 90 (319)
T ss_dssp EECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECT-TSSEEEEEETTSEEE
T ss_pred EEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECC-CCCEEEEEeCCCEEE
Confidence 345788999999998765 3 4488899999999975422 123677999999999 689999999999999
Q ss_pred EEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCC---
Q psy4571 130 IWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNE--- 206 (437)
Q Consensus 130 vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~--- 206 (437)
+||+. ..+.+..+.+|...|.+++|+|++.. |++|+.|++|++||++. + ++..+.+|...|.+++|+|.+.
T Consensus 91 ~wd~~---~~~~~~~~~~h~~~v~~~~~~~~~~~-l~s~s~D~~i~vwd~~~-~-~~~~~~~h~~~v~~~~~~~~~~~~~ 164 (319)
T 3frx_A 91 LWDVA---TGETYQRFVGHKSDVMSVDIDKKASM-IISGSRDKTIKVWTIKG-Q-CLATLLGHNDWVSQVRVVPNEKADD 164 (319)
T ss_dssp EEETT---TTEEEEEEECCSSCEEEEEECTTSCE-EEEEETTSCEEEEETTS-C-EEEEECCCSSCEEEEEECCC-----
T ss_pred EEECC---CCCeeEEEccCCCcEEEEEEcCCCCE-EEEEeCCCeEEEEECCC-C-eEEEEeccCCcEEEEEEccCCCCCC
Confidence 99998 56678889999999999999999994 99999999999999985 3 3778889999999999999532
Q ss_pred --cEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCC
Q psy4571 207 --TILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDS 284 (437)
Q Consensus 207 --~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~ 284 (437)
..+++|+.|+.|++||++.. .....+.+|...|.+++|+|+++ +|++++.||.|++||+++++
T Consensus 165 ~~~~l~s~~~d~~i~~wd~~~~--------------~~~~~~~~h~~~v~~~~~sp~g~-~l~s~~~dg~i~iwd~~~~~ 229 (319)
T 3frx_A 165 DSVTIISAGNDKMVKAWNLNQF--------------QIEADFIGHNSNINTLTASPDGT-LIASAGKDGEIMLWNLAAKK 229 (319)
T ss_dssp -CCEEEEEETTSCEEEEETTTT--------------EEEEEECCCCSCEEEEEECTTSS-EEEEEETTCEEEEEETTTTE
T ss_pred CccEEEEEeCCCEEEEEECCcc--------------hhheeecCCCCcEEEEEEcCCCC-EEEEEeCCCeEEEEECCCCc
Confidence 26899999999999999875 33455789999999999999999 89999999999999999987
Q ss_pred CceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhc--------CCCccccccC
Q psy4571 285 DTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLL--------GTEEESSDRH 356 (437)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~--------~h~~~~~~~~ 356 (437)
.+..+. ....+..++|+|++.++++++.++ +++|++..+..+..+. .|...+..+.
T Consensus 230 ~~~~~~----~~~~v~~~~~sp~~~~la~~~~~~------------i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 293 (319)
T 3frx_A 230 AMYTLS----AQDEVFSLAFSPNRYWLAAATATG------------IKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLA 293 (319)
T ss_dssp EEEEEE----CCSCEEEEEECSSSSEEEEEETTE------------EEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEE
T ss_pred EEEEec----CCCcEEEEEEcCCCCEEEEEcCCC------------cEEEEeCcCeeeeccCccccccccCcCcceeEEE
Confidence 776665 245677889999999999987665 6888887766554442 3455677889
Q ss_pred CCCCCcccccc-------cccc
Q psy4571 357 SSDNDTEDLNS-------IWSM 371 (437)
Q Consensus 357 ~~~~~~~~~~~-------~w~~ 371 (437)
++|+|..+++. +|++
T Consensus 294 ~spdg~~l~sg~~Dg~i~vWd~ 315 (319)
T 3frx_A 294 WSADGQTLFAGYTDNVIRVWQV 315 (319)
T ss_dssp ECTTSSEEEEEETTSCEEEEEE
T ss_pred ECCCCCEEEEeecCceEEEEEE
Confidence 99999988764 7776
No 29
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.8e-35 Score=283.17 Aligned_cols=295 Identities=10% Similarity=0.077 Sum_probs=246.5
Q ss_pred cceeEEEEeeCCCcc-eEEEeeccCceEeeec----CC---------------------------CceeEEEecCCCCeE
Q psy4571 34 IYRFYRLCVAEPFDD-AVEERVINEEYKIWKK----NT---------------------------PFLYDLVVNNYVANI 81 (437)
Q Consensus 34 ~~~v~~~~~~~~~~~-~l~tgs~d~~v~iw~~----~~---------------------------~~~~~~~~~~~~~~i 81 (437)
.-.|.+++|+ |+++ ++++|+.|+.+++|+. .+ +.+..+.|++....+
T Consensus 45 ~~~v~~~~~s-~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 123 (425)
T 1r5m_A 45 LDNIVSSTWN-PLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSI 123 (425)
T ss_dssp CSCCSEEEEC-SSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEE
T ss_pred cCceEEEEEC-CCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCEE
Confidence 4679999999 9999 9999999999999998 33 357778888877766
Q ss_pred -EEecCceEEEEEeeecc---ccccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCC------
Q psy4571 82 -SCILNISILFFEIIFTQ---NFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAE------ 151 (437)
Q Consensus 82 -~~~~~~~i~~~~~~~~~---~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~------ 151 (437)
++..++.|++||..... ...+...|.+++|+| ++.+|++++.||.|++||+. ..+.+..+..+...
T Consensus 124 ~~~~~dg~i~i~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~---~~~~~~~~~~~~~~~~~~~~ 199 (425)
T 1r5m_A 124 VTGVENGELRLWNKTGALLNVLNFHRAPIVSVKWNK-DGTHIISMDVENVTILWNVI---SGTVMQHFELKETGGSSINA 199 (425)
T ss_dssp EEEETTSCEEEEETTSCEEEEECCCCSCEEEEEECT-TSSEEEEEETTCCEEEEETT---TTEEEEEECCC---------
T ss_pred EEEeCCCeEEEEeCCCCeeeeccCCCccEEEEEECC-CCCEEEEEecCCeEEEEECC---CCcEEEEeeccccCccceee
Confidence 56678999999932211 123567899999999 68899999999999999998 45666777777666
Q ss_pred ---------eEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEE
Q psy4571 152 ---------VNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWD 222 (437)
Q Consensus 152 ---------v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd 222 (437)
+.+++|+|++. +++++.||.|++||+++.+. ...+..|...|.+++|+|+++ .|++++.|+.|++||
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~i~~~d~~~~~~-~~~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~i~i~d 275 (425)
T 1r5m_A 200 ENHSGDGSLGVDVEWVDDDK--FVIPGPKGAIFVYQITEKTP-TGKLIGHHGPISVLEFNDTNK-LLLSASDDGTLRIWH 275 (425)
T ss_dssp ------CCCBSCCEEEETTE--EEEECGGGCEEEEETTCSSC-SEEECCCSSCEEEEEEETTTT-EEEEEETTSCEEEEC
T ss_pred ccccCCcceeeEEEEcCCCE--EEEEcCCCeEEEEEcCCCce-eeeeccCCCceEEEEECCCCC-EEEEEcCCCEEEEEE
Confidence 99999999764 89999999999999998654 778889999999999999998 589999999999999
Q ss_pred cCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceee
Q psy4571 223 LSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISS 302 (437)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 302 (437)
++.... +..+.+|...|.+++|+|++ ++++++.|+.|++||+++++....+.. +...+..+
T Consensus 276 ~~~~~~--------------~~~~~~~~~~i~~~~~~~~~--~l~~~~~d~~i~i~d~~~~~~~~~~~~---~~~~i~~~ 336 (425)
T 1r5m_A 276 GGNGNS--------------QNCFYGHSQSIVSASWVGDD--KVISCSMDGSVRLWSLKQNTLLALSIV---DGVPIFAG 336 (425)
T ss_dssp SSSBSC--------------SEEECCCSSCEEEEEEETTT--EEEEEETTSEEEEEETTTTEEEEEEEC---TTCCEEEE
T ss_pred CCCCcc--------------ceEecCCCccEEEEEECCCC--EEEEEeCCCcEEEEECCCCcEeEeccc---CCccEEEE
Confidence 987643 34467899999999999998 688999999999999999876665543 45567778
Q ss_pred eecCCCCcccccCCCCcccccccccccccccccchhhh--------------------hhhhhcCCCc--cccccCCCCC
Q psy4571 303 TASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCE--------------------EQRQLLGTEE--ESSDRHSSDN 360 (437)
Q Consensus 303 ~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~--------------------~~~~~~~h~~--~~~~~~~~~~ 360 (437)
+|+|++.++++++.++. +++||+.+++ .+..+.+|.. .+..+.++|+
T Consensus 337 ~~s~~~~~l~~~~~dg~-----------i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 405 (425)
T 1r5m_A 337 RISQDGQKYAVAFMDGQ-----------VNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCA 405 (425)
T ss_dssp EECTTSSEEEEEETTSC-----------EEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTT
T ss_pred EEcCCCCEEEEEECCCe-----------EEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCC
Confidence 99999999999999998 8999999998 8888999976 8999999999
Q ss_pred Ccccccc
Q psy4571 361 DTEDLNS 367 (437)
Q Consensus 361 ~~~~~~~ 367 (437)
+..++..
T Consensus 406 ~~~l~~~ 412 (425)
T 1r5m_A 406 GNKISVA 412 (425)
T ss_dssp SSEEEEE
T ss_pred CceEEEE
Confidence 9877553
No 30
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=2e-35 Score=284.47 Aligned_cols=291 Identities=11% Similarity=0.088 Sum_probs=231.6
Q ss_pred eEEEEeeCCCcceEEEeeccCceEeeecCCC---------c-eeEEEecCCCCeE-EEecCceEEEEEeeeccc----cc
Q psy4571 37 FYRLCVAEPFDDAVEERVINEEYKIWKKNTP---------F-LYDLVVNNYVANI-SCILNISILFFEIIFTQN----FP 101 (437)
Q Consensus 37 v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~---------~-~~~~~~~~~~~~i-~~~~~~~i~~~~~~~~~~----~~ 101 (437)
+.+++|+ |+++++++|+.|+.+++|+..++ . .....+.+....+ ++..++.|++||+..... ..
T Consensus 59 ~~~~~~s-~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 137 (420)
T 3vl1_A 59 GKGNTFE-KVGSHLYKARLDGHDFLFNTIIRDGSKMLKRADYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQA 137 (420)
T ss_dssp CTTCEEE-EEETTEEEEEETTEEEEEECCSEETTTTSCSCCEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTS
T ss_pred ccceeee-ecCCeEEEEEcCCcEEEEEecccceeeEEecCCceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeeccc
Confidence 4478999 99999999999999999995431 2 2333456666666 667889999999764432 24
Q ss_pred cCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCC
Q psy4571 102 FPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRN 181 (437)
Q Consensus 102 ~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~ 181 (437)
+...|.+++|+| ++.+|++|+.||.|++||+. ..+.+..+.+|...|.+++|+|++.. |++++.||.|++||+++
T Consensus 138 h~~~v~~~~~~~-~~~~l~s~s~d~~i~iwd~~---~~~~~~~~~~h~~~v~~~~~~~~~~~-l~s~~~d~~v~iwd~~~ 212 (420)
T 3vl1_A 138 HVSEITKLKFFP-SGEALISSSQDMQLKIWSVK---DGSNPRTLIGHRATVTDIAIIDRGRN-VLSASLDGTIRLWECGT 212 (420)
T ss_dssp SSSCEEEEEECT-TSSEEEEEETTSEEEEEETT---TCCCCEEEECCSSCEEEEEEETTTTE-EEEEETTSCEEEEETTT
T ss_pred ccCccEEEEECC-CCCEEEEEeCCCeEEEEeCC---CCcCceEEcCCCCcEEEEEEcCCCCE-EEEEcCCCcEEEeECCC
Confidence 678999999999 68899999999999999998 55677888899999999999999995 99999999999999998
Q ss_pred CceeeeEecc---CCCceEEEE---------------------EcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCC
Q psy4571 182 LKLKLHSFES---HKDEIFQVQ---------------------WSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAED 237 (437)
Q Consensus 182 ~~~~~~~~~~---h~~~v~~v~---------------------~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~ 237 (437)
++. +..+.. |...|.+++ |+|+++ ++++|+.||.|++||+++....
T Consensus 213 ~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~i~d~~~~~~~-------- 282 (420)
T 3vl1_A 213 GTT-IHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGK-YVIAGHVSGVITVHNVFSKEQT-------- 282 (420)
T ss_dssp TEE-EEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTE-EEEEEETTSCEEEEETTTCCEE--------
T ss_pred Cce-eEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCC-EEEEEcCCCeEEEEECCCCcee--------
Confidence 654 666653 444555555 567887 5899999999999999876432
Q ss_pred CCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCC-ceeeeeeecccCCceeeeecCCCCcccccCC
Q psy4571 238 GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSD-TKTMRLDSIRSNGGISSTASPTASSTASESP 316 (437)
Q Consensus 238 ~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~ 316 (437)
.....+|...|.+++|+|+++.++++|+.||.|++||+++++. +..+.. ++...+...+.+++.++++++.
T Consensus 283 -----~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~l~s~~~ 354 (420)
T 3vl1_A 283 -----IQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLI---NEGTPINNVYFAAGALFVSSGF 354 (420)
T ss_dssp -----EEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEE---STTSCEEEEEEETTEEEEEETT
T ss_pred -----EEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhc---cCCCCceEEEeCCCCEEEEecC
Confidence 2334568889999999999987788999999999999998754 455443 3455666667789999999999
Q ss_pred CCcccccccccccccccccchhhh---------hhhhhcCCCccccccCCCCCCc
Q psy4571 317 TPTNSVHEKNYWQGLVLFDILVCE---------EQRQLLGTEEESSDRHSSDNDT 362 (437)
Q Consensus 317 d~~~~~~~~~~~~~i~~wd~~~~~---------~~~~~~~h~~~~~~~~~~~~~~ 362 (437)
|+. +++||+...+ ....+.+|...+..+.++|++.
T Consensus 355 d~~-----------v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 398 (420)
T 3vl1_A 355 DTS-----------IKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDE 398 (420)
T ss_dssp TEE-----------EEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSS
T ss_pred Ccc-----------EEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCC
Confidence 999 7888877632 2234577888899999999888
No 31
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.3e-35 Score=272.22 Aligned_cols=285 Identities=18% Similarity=0.254 Sum_probs=214.7
Q ss_pred eEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeecc-----cc--c-cCCCcceEEeeCCCCCEEEEEECCCcEEE
Q psy4571 59 YKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQ-----NF--P-FPLSRQDVAWHLLHESLFGSVADDQKLMI 130 (437)
Q Consensus 59 v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~-----~~--~-~~~~v~~~~~sp~~~~~l~~~~~dg~v~v 130 (437)
++.+..|.+.+..+.+++. ..++++.|+.|++|++.... .+ . +...|.+++|+| ++.+|++|+.|++|++
T Consensus 7 ~~~~~~h~~~v~~~~~s~~-~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp-~~~~las~s~D~~v~i 84 (330)
T 2hes_X 7 IKSLKLYKEKIWSFDFSQG-ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRP-HTSLLAAGSFDSTVSI 84 (330)
T ss_dssp EEEEECCSSCEEEEEEETT-EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECT-TSSEEEEEETTSCEEE
T ss_pred ceeeccCCCceeeeccCCC-EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECC-CCCEEEEEeCCCcEEE
Confidence 4556788899999998876 44578899999999976431 11 2 667899999999 6889999999999999
Q ss_pred EEcCCCC----CCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCc---eeeeEeccCCCceEEEEEcC
Q psy4571 131 WDTRSHN----VSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLK---LKLHSFESHKDEIFQVQWSP 203 (437)
Q Consensus 131 wd~~~~~----~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~---~~~~~~~~h~~~v~~v~~~p 203 (437)
||+.... ....+..+.+|.+.|.+++|+|++.+ |++|+.|++|++||++... .++..+.+|...|.+++|+|
T Consensus 85 w~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~-las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p 163 (330)
T 2hes_X 85 WAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYY-LATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHP 163 (330)
T ss_dssp EEC-------CCCEEEEEEC----CEEEEEECTTSCE-EEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECS
T ss_pred EEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCE-EEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECC
Confidence 9986321 22456678899999999999999995 9999999999999995422 34667889999999999999
Q ss_pred CCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccC--CCeEEEEEeCCCeEEEEeCC
Q psy4571 204 HNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPN--EPWVICSVSEDNIMQEYCDS 281 (437)
Q Consensus 204 ~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~--~~~~l~s~~~dg~i~iwd~~ 281 (437)
++. +|++|+.|++|++||..... .+++..+.+|...|.+++|+|+ +. .+++|+.|++|++||++
T Consensus 164 ~~~-~l~s~s~D~~i~iW~~~~~~------------~~~~~~~~~h~~~v~~~~~~~~~~~~-~l~s~s~D~~v~iw~~~ 229 (330)
T 2hes_X 164 SEA-LLASSSYDDTVRIWKDYDDD------------WECVAVLNGHEGTVWSSDFDKTEGVF-RLCSGSDDSTVRVWKYM 229 (330)
T ss_dssp SSS-EEEEEETTSCEEEEEEETTE------------EEEEEEECCCSSCEEEEEECCSSSSC-EEEEEETTSCEEEEEEE
T ss_pred CCC-EEEEEcCCCeEEEEECCCCC------------eeEEEEccCCCCcEEEEEecCCCCee-EEEEEeCCCeEEEEEec
Confidence 998 59999999999999986531 1345678899999999999998 45 78999999999999997
Q ss_pred CCCCce-----eee-eeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhh--hh-hhhcCCCc-c
Q psy4571 282 TDSDTK-----TMR-LDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCE--EQ-RQLLGTEE-E 351 (437)
Q Consensus 282 ~~~~~~-----~~~-~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~--~~-~~~~~h~~-~ 351 (437)
.+.... ... ....+...+..++|++++ ++++++.|+. +++||..+++ .. ..+.+|.. .
T Consensus 230 ~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~-----------v~iw~~~~~~~~~~~~~~~~h~~~~ 297 (330)
T 2hes_X 230 GDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGV-----------LAVYEEVDGEWKVFAKRALCHGVYE 297 (330)
T ss_dssp EECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSC-----------EEEEEEETTEEEEEEEESCTTTTSC
T ss_pred CCCccccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCE-----------EEEEEcCCCceEEEeccccccccce
Confidence 653211 111 111245567778999765 8899999998 7899987763 22 23467876 7
Q ss_pred ccccCCCC--CCcccccc-------ccccC
Q psy4571 352 SSDRHSSD--NDTEDLNS-------IWSMT 372 (437)
Q Consensus 352 ~~~~~~~~--~~~~~~~~-------~w~~~ 372 (437)
+..+.++| ++..+++. +|++.
T Consensus 298 v~~v~~~~~~~~~~las~s~Dg~v~~W~~~ 327 (330)
T 2hes_X 298 INVVKWLELNGKTILATGGDDGIVNFWSLE 327 (330)
T ss_dssp EEEEEEC-----CCEEEEETTSEEEEEEC-
T ss_pred EEEEEEecCCCceEEEEecCCCcEEEEEec
Confidence 88888988 56666543 78764
No 32
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=2.3e-34 Score=273.89 Aligned_cols=286 Identities=14% Similarity=0.164 Sum_probs=227.4
Q ss_pred cccccceeEEEEeeCCCc-ceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcce
Q psy4571 30 LSHSIYRFYRLCVAEPFD-DAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQD 108 (437)
Q Consensus 30 ~~~~~~~v~~~~~~~~~~-~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~ 108 (437)
+.-+...|.+++|+ |++ +++++|+.|+.|++|+..++....... ...+...|.+
T Consensus 69 ~~~h~~~v~~~~~~-~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~------------------------~~~h~~~v~~ 123 (383)
T 3ei3_B 69 ASPFDRRVTSLEWH-PTHPTTVAVGSKGGDIILWDYDVQNKTSFIQ------------------------GMGPGDAITG 123 (383)
T ss_dssp ECCCSSCEEEEEEC-SSCTTEEEEEEBTSCEEEEETTSTTCEEEEC------------------------CCSTTCBEEE
T ss_pred ccCCCCCEEEEEEC-CCCCCEEEEEcCCCeEEEEeCCCcccceeee------------------------cCCcCCceeE
Confidence 34456789999999 887 999999999999999987665443321 0124567889
Q ss_pred EEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeec---cCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCcee
Q psy4571 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVD---AHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLK 185 (437)
Q Consensus 109 ~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~---~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~ 185 (437)
++|+|.++.+|++++.||.|++||+.. ..+..+. .|...|.+++|+|++.. |++|+.|+.|++||++. + +
T Consensus 124 ~~~~~~~~~~l~s~~~d~~i~iwd~~~----~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~i~i~d~~~-~-~ 196 (383)
T 3ei3_B 124 MKFNQFNTNQLFVSSIRGATTLRDFSG----SVIQVFAKTDSWDYWYCCVDVSVSRQM-LATGDSTGRLLLLGLDG-H-E 196 (383)
T ss_dssp EEEETTEEEEEEEEETTTEEEEEETTS----CEEEEEECCCCSSCCEEEEEEETTTTE-EEEEETTSEEEEEETTS-C-E
T ss_pred EEeCCCCCCEEEEEeCCCEEEEEECCC----CceEEEeccCCCCCCeEEEEECCCCCE-EEEECCCCCEEEEECCC-C-E
Confidence 999996678999999999999999983 3344444 34488999999999995 99999999999999953 3 4
Q ss_pred eeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEcc-CCCe
Q psy4571 186 LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNP-NEPW 264 (437)
Q Consensus 186 ~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p-~~~~ 264 (437)
+..+..|...|.+++|+|++++++++|+.|+.|++||+++..... ..+..+ +|...|.+++|+| ++.
T Consensus 197 ~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~----------~~~~~~-~~~~~v~~~~~s~~~~~- 264 (383)
T 3ei3_B 197 IFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKN----------SYIAEM-PHEKPVNAAYFNPTDST- 264 (383)
T ss_dssp EEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTT----------CEEEEE-ECSSCEEEEEECTTTSC-
T ss_pred EEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCccc----------ceEEEe-cCCCceEEEEEcCCCCC-
Confidence 778889999999999999998679999999999999998754322 233334 7899999999999 988
Q ss_pred EEEEEeCCCeEEEEeCCCCCCceeeeeeecc--------------cCCceeeeecCCCCcccccCCCCcccccccccccc
Q psy4571 265 VICSVSEDNIMQEYCDSTDSDTKTMRLDSIR--------------SNGGISSTASPTASSTASESPTPTNSVHEKNYWQG 330 (437)
Q Consensus 265 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~--------------~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~ 330 (437)
++++++.|+.|++||+++++....+...... ......++++|+|++ +++.|+.
T Consensus 265 ~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~----------- 331 (383)
T 3ei3_B 265 KLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRT----------- 331 (383)
T ss_dssp EEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCC-----------
T ss_pred EEEEEcCCCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCe-----------
Confidence 7889999999999999999887766543211 122333567788877 7778887
Q ss_pred cccccchhhhhhhhhcC--CCccccccCCCCCCcccccc------ccccC
Q psy4571 331 LVLFDILVCEEQRQLLG--TEEESSDRHSSDNDTEDLNS------IWSMT 372 (437)
Q Consensus 331 i~~wd~~~~~~~~~~~~--h~~~~~~~~~~~~~~~~~~~------~w~~~ 372 (437)
+++||+.+++.+..+.+ |...+..+.++|++..+++. +|++.
T Consensus 332 i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~sd~~i~iw~~~ 381 (383)
T 3ei3_B 332 IDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASGMGFNILIWNRE 381 (383)
T ss_dssp EEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEEETTEEEEEECC
T ss_pred EEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEecCCcEEEEecC
Confidence 89999999999999987 45666667999999877664 67664
No 33
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=4.3e-34 Score=262.51 Aligned_cols=256 Identities=16% Similarity=0.223 Sum_probs=200.0
Q ss_pred cccceeEEEEeeCCCcceEEEeeccCceEeeecCCCc--eeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceE
Q psy4571 32 HSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPF--LYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDV 109 (437)
Q Consensus 32 ~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~--~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~ 109 (437)
-+.-.|.+++|+ |++++|++|+.|++|++|+..++. .... ...|...|.++
T Consensus 7 ~h~~~V~~~~~s-~~g~~las~s~D~~v~iw~~~~~~~~~~~~--------------------------l~gH~~~V~~v 59 (297)
T 2pm7_B 7 AHNEMIHDAVMD-YYGKRMATCSSDKTIKIFEVEGETHKLIDT--------------------------LTGHEGPVWRV 59 (297)
T ss_dssp SCSSCEEEEEEC-TTSSEEEEEETTSCEEEEEBCSSCBCCCEE--------------------------ECCCSSCEEEE
T ss_pred CCcCceEEEEEC-CCCCEEEEEeCCCEEEEEecCCCCcEEEEE--------------------------EccccCCeEEE
Confidence 345678999999 999999999999999999976421 1111 01355788999
Q ss_pred EeeCC-CCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCC--CCcEEEEEeCCCeEEEEeCCCCce-e
Q psy4571 110 AWHLL-HESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPY--SEYILATGSADKTVALWDLRNLKL-K 185 (437)
Q Consensus 110 ~~sp~-~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~--~~~~l~sgs~dg~i~lwd~~~~~~-~ 185 (437)
+|+|. ++.+|++|+.||+|++||++++. ...+..+.+|...|.+++|+|+ +. +|++|+.|++|++||+++... .
T Consensus 60 ~~s~~~~g~~l~s~s~D~~v~iWd~~~~~-~~~~~~~~~h~~~v~~v~~~p~~~g~-~l~s~s~d~~v~~wd~~~~~~~~ 137 (297)
T 2pm7_B 60 DWAHPKFGTILASCSYDGKVMIWKEENGR-WSQIAVHAVHSASVNSVQWAPHEYGP-MLLVASSDGKVSVVEFKENGTTS 137 (297)
T ss_dssp EECCGGGCSEEEEEETTTEEEEEEBSSSC-BCCCEEECCCSSCEEEEEECCGGGCS-EEEEEETTSEEEEEEBCSSSCBC
T ss_pred EecCCCcCCEEEEEcCCCEEEEEEcCCCc-eEEEEEeecCCCceeEEEeCcCCCCc-EEEEEECCCcEEEEEecCCCcee
Confidence 99863 47899999999999999998542 2455677889999999999997 66 599999999999999987532 2
Q ss_pred eeEeccCCCceEEEEEcCCC------------CcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccE
Q psy4571 186 LHSFESHKDEIFQVQWSPHN------------ETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKI 253 (437)
Q Consensus 186 ~~~~~~h~~~v~~v~~~p~~------------~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 253 (437)
...+.+|...|.+++|+|++ ..+|++|+.|++|++||++..... ......+.+|...|
T Consensus 138 ~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~----------~~~~~~l~~H~~~V 207 (297)
T 2pm7_B 138 PIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQT----------YVLESTLEGHSDWV 207 (297)
T ss_dssp CEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTE----------EEEEEEECCCSSCE
T ss_pred eeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCce----------EEEEEEecCCCCce
Confidence 45677899999999999973 126999999999999999865321 12345688999999
Q ss_pred EEEEEccCC--CeEEEEEeCCCeEEEEeCCCCCCceeeee--eecccCCceeeeecCCCCcccccCCCCccccccccccc
Q psy4571 254 SDFSWNPNE--PWVICSVSEDNIMQEYCDSTDSDTKTMRL--DSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQ 329 (437)
Q Consensus 254 ~~l~~~p~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~ 329 (437)
.+++|+|++ ..+|++++.|++|++||+++......... ...+...+..++|+|+|++|++++.|+.
T Consensus 208 ~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~---------- 277 (297)
T 2pm7_B 208 RDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNK---------- 277 (297)
T ss_dssp EEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSC----------
T ss_pred EEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCc----------
Confidence 999999996 34899999999999999987532211111 1223455677899999999999999999
Q ss_pred ccccccch
Q psy4571 330 GLVLFDIL 337 (437)
Q Consensus 330 ~i~~wd~~ 337 (437)
+++|+..
T Consensus 278 -v~lw~~~ 284 (297)
T 2pm7_B 278 -VTLWKEN 284 (297)
T ss_dssp -EEEEEEC
T ss_pred -EEEEEEC
Confidence 6777654
No 34
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.2e-35 Score=279.33 Aligned_cols=277 Identities=15% Similarity=0.211 Sum_probs=226.4
Q ss_pred ccceeEEEEeeCCCcceEEEeeccCceEeeecCC---------------CceeEEEecCC-CCeE-EEecCceEEEEEee
Q psy4571 33 SIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNT---------------PFLYDLVVNNY-VANI-SCILNISILFFEII 95 (437)
Q Consensus 33 ~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~---------------~~~~~~~~~~~-~~~i-~~~~~~~i~~~~~~ 95 (437)
....|.+++|+ |++.+|++|+.|+.+++|+... +.+..+.+++. ...+ ++..|+.|++||+.
T Consensus 66 ~~~~v~~~~~s-~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~ 144 (416)
T 2pm9_A 66 VDSKFNDLDWS-HNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMN 144 (416)
T ss_dssp CSSCEEEEEEC-SSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTT
T ss_pred cCCceEEEEEC-CCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECC
Confidence 35679999999 9999999999999999999544 34667788776 4444 66778999999987
Q ss_pred ecc---------c----cccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccC------CCCeEEEE
Q psy4571 96 FTQ---------N----FPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAH------TAEVNCLS 156 (437)
Q Consensus 96 ~~~---------~----~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h------~~~v~~l~ 156 (437)
... . ..+...|.+++|+|+++.+|++++.||.|++||++ ..+.+..+..| ...|.+++
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~---~~~~~~~~~~~~~~~~~~~~v~~~~ 221 (416)
T 2pm9_A 145 KCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLK---AKKEVIHLSYTSPNSGIKQQLSVVE 221 (416)
T ss_dssp TTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETT---TTEEEEEECCCCCSSCCCCCEEEEE
T ss_pred CCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECC---CCCcceEEeccccccccCCceEEEE
Confidence 554 1 23567899999999658899999999999999998 45566666665 78999999
Q ss_pred EeCCCCcEEEEEeCCC---eEEEEeCCCCceeeeEec-cCCCceEEEEEcC-CCCcEEEEEeCCCeEEEEEcCCCCCCCC
Q psy4571 157 FNPYSEYILATGSADK---TVALWDLRNLKLKLHSFE-SHKDEIFQVQWSP-HNETILASSGTDRRLHVWDLSKIGEEQS 231 (437)
Q Consensus 157 ~~~~~~~~l~sgs~dg---~i~lwd~~~~~~~~~~~~-~h~~~v~~v~~~p-~~~~~l~sg~~dg~i~vwd~~~~~~~~~ 231 (437)
|+|++..++++++.|+ .|++||+++...+...+. +|...|.+++|+| +++ +|++++.|+.|++||++++
T Consensus 222 ~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~-~l~s~~~dg~v~~wd~~~~----- 295 (416)
T 2pm9_A 222 WHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEH-LLLSSGRDNTVLLWNPESA----- 295 (416)
T ss_dssp ECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSS-CEEEEESSSEEEEECSSSC-----
T ss_pred ECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCC-eEEEEeCCCCEEEeeCCCC-----
Confidence 9999866799999999 999999998756577787 8999999999999 776 5999999999999999875
Q ss_pred CCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeee--------------------
Q psy4571 232 TEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRL-------------------- 291 (437)
Q Consensus 232 ~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-------------------- 291 (437)
+.+..+.+|...|.+++|+|+++.++++++.|+.|++||+.+.........
T Consensus 296 ---------~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (416)
T 2pm9_A 296 ---------EQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREE 366 (416)
T ss_dssp ---------CEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC----------------------
T ss_pred ---------ccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccc
Confidence 345567899999999999999944899999999999999998765433210
Q ss_pred ------------eecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhh
Q psy4571 292 ------------DSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVC 339 (437)
Q Consensus 292 ------------~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~ 339 (437)
...+...+..++|+|+|+++++++.|+. |++||+.+.
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~la~~~~d~~-----------v~~w~~~~~ 415 (416)
T 2pm9_A 367 SKEKPSVFHLQAPTWYGEPSPAAHWAFGGKLVQITPDGKG-----------VSITNPKIS 415 (416)
T ss_dssp CCSCCCSSCCCCCSTTCCCSCCCEEETTTEEECBCTTSSC-----------BCCBCCCCC
T ss_pred cccccccccccCCccccCCccceEEeeCCeEEEEeCCCCe-----------EEEEEeccC
Confidence 0002233447799999999999999999 788888764
No 35
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=8.7e-34 Score=266.00 Aligned_cols=274 Identities=17% Similarity=0.262 Sum_probs=216.9
Q ss_pred eEeeecCCCceeEEEe-----cC-CCCeE-EEecCceEEEEEeeecc-----------ccccCCCcceEEeeCCCCCEEE
Q psy4571 59 YKIWKKNTPFLYDLVV-----NN-YVANI-SCILNISILFFEIIFTQ-----------NFPFPLSRQDVAWHLLHESLFG 120 (437)
Q Consensus 59 v~iw~~~~~~~~~~~~-----~~-~~~~i-~~~~~~~i~~~~~~~~~-----------~~~~~~~v~~~~~sp~~~~~l~ 120 (437)
......|.+.+..+.+ .+ +...+ +++.|++|++||+.... ...+...|.+++|+| ++.+++
T Consensus 14 ~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~-~~~~l~ 92 (343)
T 2xzm_R 14 RGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQ-ENCFAI 92 (343)
T ss_dssp EEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECS-STTEEE
T ss_pred eeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECC-CCCEEE
Confidence 3456678899999988 44 44444 77889999999975321 123667899999999 688999
Q ss_pred EEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEe---ccCCCceE
Q psy4571 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSF---ESHKDEIF 197 (437)
Q Consensus 121 ~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~---~~h~~~v~ 197 (437)
+|+.|++|++||++ ..+.+..+.+|...|.+++|+|++.. |++|+.|++|++||+.. .. .... ..|...|.
T Consensus 93 s~s~D~~v~lwd~~---~~~~~~~~~~h~~~v~~v~~sp~~~~-l~s~~~d~~i~~wd~~~-~~-~~~~~~~~~~~~~v~ 166 (343)
T 2xzm_R 93 SSSWDKTLRLWDLR---TGTTYKRFVGHQSEVYSVAFSPDNRQ-ILSAGAEREIKLWNILG-EC-KFSSAEKENHSDWVS 166 (343)
T ss_dssp EEETTSEEEEEETT---SSCEEEEEECCCSCEEEEEECSSTTE-EEEEETTSCEEEEESSS-CE-EEECCTTTSCSSCEE
T ss_pred EEcCCCcEEEEECC---CCcEEEEEcCCCCcEEEEEECCCCCE-EEEEcCCCEEEEEeccC-Cc-eeeeecccCCCceee
Confidence 99999999999998 56778888999999999999999995 99999999999999984 32 2222 36889999
Q ss_pred EEEEcCCCC---------cEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEE
Q psy4571 198 QVQWSPHNE---------TILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICS 268 (437)
Q Consensus 198 ~v~~~p~~~---------~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s 268 (437)
+++|+|++. .++++++.|+.|++||... .....+.+|...|.+++|+|+|+ +|++
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~---------------~~~~~~~~h~~~v~~~~~s~~g~-~l~s 230 (343)
T 2xzm_R 167 CVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNF---------------QIRYTFKAHESNVNHLSISPNGK-YIAT 230 (343)
T ss_dssp EEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTT---------------EEEEEEECCSSCEEEEEECTTSS-EEEE
T ss_pred eeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCC---------------ceeEEEcCccccceEEEECCCCC-EEEE
Confidence 999999872 2699999999999999432 34456789999999999999999 7899
Q ss_pred EeCCCeEEEEeCCCCC-CceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhh--hh
Q psy4571 269 VSEDNIMQEYCDSTDS-DTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQR--QL 345 (437)
Q Consensus 269 ~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~--~~ 345 (437)
|+.||.|++||+.... ....+. +...+..++|+|++.++++++ |+. +++||+.+++... .+
T Consensus 231 gs~dg~v~iwd~~~~~~~~~~~~----~~~~v~~v~~sp~~~~la~~~-d~~-----------v~iw~~~~~~~~~~~~~ 294 (343)
T 2xzm_R 231 GGKDKKLLIWDILNLTYPQREFD----AGSTINQIAFNPKLQWVAVGT-DQG-----------VKIFNLMTQSKAPVCTI 294 (343)
T ss_dssp EETTCEEEEEESSCCSSCSEEEE----CSSCEEEEEECSSSCEEEEEE-SSC-----------EEEEESSSCCSCSEEEC
T ss_pred EcCCCeEEEEECCCCcccceeec----CCCcEEEEEECCCCCEEEEEC-CCC-----------EEEEEeCCCCCCceEEe
Confidence 9999999999995443 333332 234577789999999887664 555 6788877665443 22
Q ss_pred -----------cCCCccccccCCCCCCcccccc-------cccc
Q psy4571 346 -----------LGTEEESSDRHSSDNDTEDLNS-------IWSM 371 (437)
Q Consensus 346 -----------~~h~~~~~~~~~~~~~~~~~~~-------~w~~ 371 (437)
.+|...+..+.++|+|..+++. +|++
T Consensus 295 ~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~ 338 (343)
T 2xzm_R 295 EAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTFSF 338 (343)
T ss_dssp CCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEETTSEEEEEEE
T ss_pred ecCcchhhhhhcCCCCceEEEEECCCCCeEEEecCCceEEEEEE
Confidence 3788889999999999887764 6765
No 36
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=1e-33 Score=264.37 Aligned_cols=277 Identities=18% Similarity=0.253 Sum_probs=221.6
Q ss_pred cccccceeEEEEeeCCC-cceEEEeeccCceEeeecC----------------CCceeEEEecCCCCeE-EEecCceEEE
Q psy4571 30 LSHSIYRFYRLCVAEPF-DDAVEERVINEEYKIWKKN----------------TPFLYDLVVNNYVANI-SCILNISILF 91 (437)
Q Consensus 30 ~~~~~~~v~~~~~~~~~-~~~l~tgs~d~~v~iw~~~----------------~~~~~~~~~~~~~~~i-~~~~~~~i~~ 91 (437)
++=+.-.|.+++|+ |+ +++|+|||.|++|++|+.. ...+..+.+++....+ ++..|+.|++
T Consensus 34 L~GH~~~V~~v~~s-p~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~ 112 (340)
T 4aow_A 34 LKGHNGWVTQIATT-PQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRL 112 (340)
T ss_dssp ECCCSSCEEEEEEC-TTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred ECCccCCEEEEEEe-CCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceE
Confidence 34456789999999 65 7899999999999999943 4567788888887766 6778999999
Q ss_pred EEeeeccc----cccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCc-EEE
Q psy4571 92 FEIIFTQN----FPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEY-ILA 166 (437)
Q Consensus 92 ~~~~~~~~----~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~-~l~ 166 (437)
|+...... ......+..+.++| .+.+|++|+.|+.+++||.... ........+|...+.+++|++++.. +++
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~s~s~d~~~~~~d~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 189 (340)
T 4aow_A 113 WDLTTGTTTRRFVGHTKDVLSVAFSS-DNRQIVSGSRDKTIKLWNTLGV--CKYTVQDESHSEWVSCVRFSPNSSNPIIV 189 (340)
T ss_dssp EETTTTEEEEEEECCSSCEEEEEECT-TSSCEEEEETTSCEEEECTTSC--EEEEECSSSCSSCEEEEEECSCSSSCEEE
T ss_pred EeecccceeeeecCCCCceeEEEEee-cCccceeecCCCeEEEEEeCCC--ceEEEEeccccCcccceEEccCCCCcEEE
Confidence 99654332 23456778888998 6788999999999999998742 2334456689999999999987532 578
Q ss_pred EEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEe
Q psy4571 167 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIH 246 (437)
Q Consensus 167 sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 246 (437)
+++.|+.|++||+++.+. ...+.+|.++|++++|+|+++ +|++|+.|+.|++||+++.. .+..+
T Consensus 190 s~~~d~~i~i~d~~~~~~-~~~~~~h~~~v~~~~~s~~~~-~l~s~s~Dg~i~iwd~~~~~--------------~~~~~ 253 (340)
T 4aow_A 190 SCGWDKLVKVWNLANCKL-KTNHIGHTGYLNTVTVSPDGS-LCASGGKDGQAMLWDLNEGK--------------HLYTL 253 (340)
T ss_dssp EEETTSCEEEEETTTTEE-EEEECCCSSCEEEEEECTTSS-EEEEEETTCEEEEEETTTTE--------------EEEEE
T ss_pred EEcCCCEEEEEECCCCce-eeEecCCCCcEEEEEECCCCC-EEEEEeCCCeEEEEEeccCc--------------eeeee
Confidence 999999999999999665 778889999999999999998 59999999999999998753 33445
Q ss_pred cCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeee------eecccCCceeeeecCCCCcccccCCCCcc
Q psy4571 247 GGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRL------DSIRSNGGISSTASPTASSTASESPTPTN 320 (437)
Q Consensus 247 ~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~------~~~~~~~~~~~~~s~~g~~l~s~s~d~~~ 320 (437)
.. ...|.++.|+|++. +++++.|+.|++||++++.....+.. ...+...+..++|+|+|++|++|+.|+.
T Consensus 254 ~~-~~~v~~~~~~~~~~--~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~- 329 (340)
T 4aow_A 254 DG-GDIINALCFSPNRY--WLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNL- 329 (340)
T ss_dssp EC-SSCEEEEEECSSSS--EEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSC-
T ss_pred cC-CceEEeeecCCCCc--eeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCE-
Confidence 44 45899999999987 44777899999999998765554432 1234456777899999999999999999
Q ss_pred cccccccccccccccchhhh
Q psy4571 321 SVHEKNYWQGLVLFDILVCE 340 (437)
Q Consensus 321 ~~~~~~~~~~i~~wd~~~~~ 340 (437)
|++||+.+|+
T Consensus 330 ----------v~iW~~~tGt 339 (340)
T 4aow_A 330 ----------VRVWQVTIGT 339 (340)
T ss_dssp ----------EEEEEEEC--
T ss_pred ----------EEEEeCCCcC
Confidence 8999999986
No 37
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=5.2e-34 Score=265.73 Aligned_cols=298 Identities=13% Similarity=0.114 Sum_probs=245.5
Q ss_pred cccceeEEEEeeCCCcceEEEeeccCceEeee-----------cCCCceeEEEecCCCCeEEEecCceEEEEEeeeccc-
Q psy4571 32 HSIYRFYRLCVAEPFDDAVEERVINEEYKIWK-----------KNTPFLYDLVVNNYVANISCILNISILFFEIIFTQN- 99 (437)
Q Consensus 32 ~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~-----------~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~- 99 (437)
...-.|.+++|+ |+++.++++..++.+..|. .|.+.+..+.+++....+.+..++.|++|++.....
T Consensus 7 ~~~~~v~~~~~s-~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~dg~i~iw~~~~~~~~ 85 (337)
T 1gxr_A 7 MGSKPAYSFHVT-ADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNK 85 (337)
T ss_dssp EEEEECCEEEEC-SSSCEEECCCCTTSSSSTTCCSEEEEEEEECCSSCCCEEEECSSSSEEEEECBSEEEEEETTSTTCC
T ss_pred ccCCceeEEEEC-CCCCEEEeecCCCcEeccccCCccccceeccCCCceEEEEEecCCcEEEEcCCCeEEEEECCCCCce
Confidence 445678899999 9999999888777655544 466788899999999988777799999999764321
Q ss_pred --c------ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCC
Q psy4571 100 --F------PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSAD 171 (437)
Q Consensus 100 --~------~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~d 171 (437)
. .+...+.+++|+| ++.+|++++.||.|++||+.+.. ......+..|...|.+++|+|++.. +++++.|
T Consensus 86 ~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~-l~~~~~d 162 (337)
T 1gxr_A 86 SPVSQLDCLNRDNYIRSCKLLP-DGCTLIVGGEASTLSIWDLAAPT-PRIKAELTSSAPACYALAISPDSKV-CFSCCSD 162 (337)
T ss_dssp SCSEEEECSCTTSBEEEEEECT-TSSEEEEEESSSEEEEEECCCC---EEEEEEECSSSCEEEEEECTTSSE-EEEEETT
T ss_pred eeeecccccCCCCcEEEEEEcC-CCCEEEEEcCCCcEEEEECCCCC-cceeeecccCCCceEEEEECCCCCE-EEEEeCC
Confidence 1 3567899999999 68899999999999999998532 2256677889999999999999985 9999999
Q ss_pred CeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccc
Q psy4571 172 KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTA 251 (437)
Q Consensus 172 g~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 251 (437)
|.|++||+++++. ...+..|...|.+++|+|+++ .+++++.||.|++||+++... +... .|..
T Consensus 163 g~v~~~d~~~~~~-~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~~~d~~~~~~--------------~~~~-~~~~ 225 (337)
T 1gxr_A 163 GNIAVWDLHNQTL-VRQFQGHTDGASCIDISNDGT-KLWTGGLDNTVRSWDLREGRQ--------------LQQH-DFTS 225 (337)
T ss_dssp SCEEEEETTTTEE-EEEECCCSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTTEE--------------EEEE-ECSS
T ss_pred CcEEEEeCCCCce-eeeeecccCceEEEEECCCCC-EEEEEecCCcEEEEECCCCce--------------Eeee-cCCC
Confidence 9999999998654 778888999999999999998 589999999999999987532 2222 4677
Q ss_pred cEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCccccccccccccc
Q psy4571 252 KISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGL 331 (437)
Q Consensus 252 ~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i 331 (437)
.+.+++|+|+++ ++++++.|+.|++||+++++... + ..+...+..++|+|+++++++++.++. +
T Consensus 226 ~v~~~~~s~~~~-~l~~~~~~~~i~~~~~~~~~~~~-~---~~~~~~v~~~~~~~~~~~l~~~~~dg~-----------i 289 (337)
T 1gxr_A 226 QIFSLGYCPTGE-WLAVGMESSNVEVLHVNKPDKYQ-L---HLHESCVLSLKFAYCGKWFVSTGKDNL-----------L 289 (337)
T ss_dssp CEEEEEECTTSS-EEEEEETTSCEEEEETTSSCEEE-E---CCCSSCEEEEEECTTSSEEEEEETTSE-----------E
T ss_pred ceEEEEECCCCC-EEEEEcCCCcEEEEECCCCCeEE-E---cCCccceeEEEECCCCCEEEEecCCCc-----------E
Confidence 899999999999 78899999999999999875432 2 224566778899999999999999998 8
Q ss_pred ccccchhhhhhhhhcCCCccccccCCCCCCcccccc
Q psy4571 332 VLFDILVCEEQRQLLGTEEESSDRHSSDNDTEDLNS 367 (437)
Q Consensus 332 ~~wd~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~ 367 (437)
++||+.+++.+. ...|...+..+.++|++..++..
T Consensus 290 ~~~~~~~~~~~~-~~~~~~~v~~~~~s~~~~~l~~~ 324 (337)
T 1gxr_A 290 NAWRTPYGASIF-QSKESSSVLSCDISVDDKYIVTG 324 (337)
T ss_dssp EEEETTTCCEEE-EEECSSCEEEEEECTTSCEEEEE
T ss_pred EEEECCCCeEEE-EecCCCcEEEEEECCCCCEEEEe
Confidence 999999988763 35577889999999999876653
No 38
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=7.5e-34 Score=266.08 Aligned_cols=240 Identities=16% Similarity=0.193 Sum_probs=194.4
Q ss_pred ccceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEee
Q psy4571 33 SIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWH 112 (437)
Q Consensus 33 ~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~s 112 (437)
+...|.+++|+ |+++++++|+.|+.+++|+..++.... .+. .....+...|.+++|+
T Consensus 96 ~~~~v~~~~~s-~~~~~l~s~~~d~~v~iw~~~~~~~~~--------~~~--------------~~~~~h~~~v~~~~~~ 152 (340)
T 1got_B 96 RSSWVMTCAYA-PSGNYVACGGLDNICSIYNLKTREGNV--------RVS--------------RELAGHTGYLSCCRFL 152 (340)
T ss_dssp SSSCEEEEEEC-TTSSEEEEEETTCEEEEEETTTCSBSC--------EEE--------------EEEECCSSCEEEEEEE
T ss_pred CCccEEEEEEC-CCCCEEEEEeCCCeEEEEECccCCCcc--------eeE--------------EEecCCCccEEEEEEC
Confidence 34457888888 888899999999999999875432100 000 0011245678899999
Q ss_pred CCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccC
Q psy4571 113 LLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESH 192 (437)
Q Consensus 113 p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h 192 (437)
| + ..+++++.||+|++||+. ..+.+..+.+|.+.|.+++|+|++. +|++|+.|++|++||++++.. ...+.+|
T Consensus 153 ~-~-~~l~s~s~d~~i~~wd~~---~~~~~~~~~~h~~~v~~~~~~~~~~-~l~sg~~d~~v~~wd~~~~~~-~~~~~~h 225 (340)
T 1got_B 153 D-D-NQIVTSSGDTTCALWDIE---TGQQTTTFTGHTGDVMSLSLAPDTR-LFVSGACDASAKLWDVREGMC-RQTFTGH 225 (340)
T ss_dssp E-T-TEEEEEETTSCEEEEETT---TTEEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTCSE-EEEECCC
T ss_pred C-C-CcEEEEECCCcEEEEECC---CCcEEEEEcCCCCceEEEEECCCCC-EEEEEeCCCcEEEEECCCCee-EEEEcCC
Confidence 8 3 458899999999999998 5667788899999999999999998 599999999999999998665 7788999
Q ss_pred CCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCC
Q psy4571 193 KDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED 272 (437)
Q Consensus 193 ~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~d 272 (437)
...|++++|+|+++ .|++|+.||.|++||++....... .....+...|.+++|+|+++ ++++|+.|
T Consensus 226 ~~~v~~v~~~p~~~-~l~s~s~d~~v~iwd~~~~~~~~~------------~~~~~~~~~v~~~~~s~~g~-~l~~g~~d 291 (340)
T 1got_B 226 ESDINAICFFPNGN-AFATGSDDATCRLFDLRADQELMT------------YSHDNIICGITSVSFSKSGR-LLLAGYDD 291 (340)
T ss_dssp SSCEEEEEECTTSS-EEEEEETTSCEEEEETTTTEEEEE------------ECCTTCCSCEEEEEECTTSS-EEEEEETT
T ss_pred cCCEEEEEEcCCCC-EEEEEcCCCcEEEEECCCCcEEEE------------EccCCcccceEEEEECCCCC-EEEEECCC
Confidence 99999999999998 599999999999999987532211 11223445799999999999 88899999
Q ss_pred CeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCc
Q psy4571 273 NIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPT 319 (437)
Q Consensus 273 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~ 319 (437)
+.|++||+.+++....+.. |...+..++|+|+|.+|++|+.|+.
T Consensus 292 ~~i~vwd~~~~~~~~~~~~---h~~~v~~~~~s~dg~~l~s~s~D~~ 335 (340)
T 1got_B 292 FNCNVWDALKADRAGVLAG---HDNRVSCLGVTDDGMAVATGSWDSF 335 (340)
T ss_dssp SEEEEEETTTCCEEEEEEC---CSSCEEEEEECTTSSCEEEEETTSC
T ss_pred CeEEEEEcccCcEeeEeec---CCCcEEEEEEcCCCCEEEEEcCCcc
Confidence 9999999999877666543 5567778899999999999999999
No 39
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=4.7e-34 Score=272.88 Aligned_cols=282 Identities=17% Similarity=0.199 Sum_probs=221.6
Q ss_pred cCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccc----------------------cCCCcceEEeeCCCCCEEEE
Q psy4571 64 KNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFP----------------------FPLSRQDVAWHLLHESLFGS 121 (437)
Q Consensus 64 ~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~----------------------~~~~v~~~~~sp~~~~~l~~ 121 (437)
.|.+.+..+.|++++..++++.++.+++|+...+.... ....|.+++|+| ++.+|++
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~-dg~~l~s 140 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSP-DGKFLAT 140 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEECBSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECT-TSSEEEE
T ss_pred CCCCEEEEEEECCCCCEEEEEcCCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECC-CCCEEEE
Confidence 37888999999999999988889999999965433211 111388999999 6889999
Q ss_pred EECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEE
Q psy4571 122 VADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQW 201 (437)
Q Consensus 122 ~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~ 201 (437)
|+.||.|++||+. ..+.+..+.+|...|.+++|+|++.. |++|+.|++|++||+++++. ...+. +...+.+++|
T Consensus 141 ~~~d~~i~iwd~~---~~~~~~~~~~h~~~v~~~~~~p~~~~-l~s~s~d~~v~iwd~~~~~~-~~~~~-~~~~v~~~~~ 214 (393)
T 1erj_A 141 GAEDRLIRIWDIE---NRKIVMILQGHEQDIYSLDYFPSGDK-LVSGSGDRTVRIWDLRTGQC-SLTLS-IEDGVTTVAV 214 (393)
T ss_dssp EETTSCEEEEETT---TTEEEEEECCCSSCEEEEEECTTSSE-EEEEETTSEEEEEETTTTEE-EEEEE-CSSCEEEEEE
T ss_pred EcCCCeEEEEECC---CCcEEEEEccCCCCEEEEEEcCCCCE-EEEecCCCcEEEEECCCCee-EEEEE-cCCCcEEEEE
Confidence 9999999999998 55677888999999999999999995 99999999999999998654 44443 6678999999
Q ss_pred cC-CCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeC
Q psy4571 202 SP-HNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCD 280 (437)
Q Consensus 202 ~p-~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~ 280 (437)
+| +++ ++++|+.|+.|++||++++....... .......+|...|.+++|+|+++ ++++|+.|+.|++||+
T Consensus 215 ~~~~~~-~l~~~s~d~~v~iwd~~~~~~~~~~~-------~~~~~~~~h~~~v~~v~~~~~g~-~l~s~s~d~~v~~wd~ 285 (393)
T 1erj_A 215 SPGDGK-YIAAGSLDRAVRVWDSETGFLVERLD-------SENESGTGHKDSVYSVVFTRDGQ-SVVSGSLDRSVKLWNL 285 (393)
T ss_dssp CSTTCC-EEEEEETTSCEEEEETTTCCEEEEEC-------------CCCSSCEEEEEECTTSS-EEEEEETTSEEEEEEC
T ss_pred ECCCCC-EEEEEcCCCcEEEEECCCCcEEEeec-------ccccCCCCCCCCEEEEEECCCCC-EEEEEeCCCEEEEEEC
Confidence 99 666 69999999999999998865332210 00011257999999999999999 7889999999999999
Q ss_pred CCCCCcee---------eeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCCcc
Q psy4571 281 STDSDTKT---------MRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEE 351 (437)
Q Consensus 281 ~~~~~~~~---------~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~ 351 (437)
++...... ......+...+..++++|++.++++|+.|+. +++||..+++.+..+.+|...
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~-----------v~iwd~~~~~~~~~l~~h~~~ 354 (393)
T 1erj_A 286 QNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRG-----------VLFWDKKSGNPLLMLQGHRNS 354 (393)
T ss_dssp ---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSE-----------EEEEETTTCCEEEEEECCSSC
T ss_pred CCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCe-----------EEEEECCCCeEEEEECCCCCC
Confidence 86533211 1112234556777899999999999999998 899999999999999999999
Q ss_pred ccccCCCC------CCcccccc-------ccccC
Q psy4571 352 SSDRHSSD------NDTEDLNS-------IWSMT 372 (437)
Q Consensus 352 ~~~~~~~~------~~~~~~~~-------~w~~~ 372 (437)
+..+.+++ ++..++++ +|++.
T Consensus 355 v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~ 388 (393)
T 1erj_A 355 VISVAVANGSSLGPEYNVFATGSGDCKARIWKYK 388 (393)
T ss_dssp EEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEE
T ss_pred EEEEEecCCcCcCCCCCEEEEECCCCcEEECccc
Confidence 98887665 56655553 77763
No 40
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=2.5e-34 Score=313.40 Aligned_cols=318 Identities=15% Similarity=0.202 Sum_probs=255.9
Q ss_pred cccceeEEEEeeCCCcceEEEeeccCceEeeec-----------CCCceeEEEecCCCCeE-EEecCceEEEEEeeeccc
Q psy4571 32 HSIYRFYRLCVAEPFDDAVEERVINEEYKIWKK-----------NTPFLYDLVVNNYVANI-SCILNISILFFEIIFTQN 99 (437)
Q Consensus 32 ~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~-----------~~~~~~~~~~~~~~~~i-~~~~~~~i~~~~~~~~~~ 99 (437)
-+...|++++|+ |+++++++|+.|++|++|+. |.+.+..+.+++.+..+ +++.|+.|++||+..++.
T Consensus 613 ~h~~~v~~~~~s-~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~ 691 (1249)
T 3sfz_A 613 PHTDAVYHACFS-QDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKL 691 (1249)
T ss_dssp CCSSCEEEEEEC-TTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCE
T ss_pred cccccEEEEEEC-CCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCce
Confidence 456779999999 99999999999999999994 45667888898888776 667889999999765543
Q ss_pred c----ccCCCcceEEeeCC-CCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeE
Q psy4571 100 F----PFPLSRQDVAWHLL-HESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTV 174 (437)
Q Consensus 100 ~----~~~~~v~~~~~sp~-~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i 174 (437)
. .+...|.+++|+|+ +..++++|+.||.|++||+. ....+..+.+|.+.|.+++|+|++.. |++|+.||.|
T Consensus 692 ~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~---~~~~~~~~~~h~~~v~~~~~sp~~~~-l~s~s~dg~v 767 (1249)
T 3sfz_A 692 VHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLN---QKECRNTMFGHTNSVNHCRFSPDDEL-LASCSADGTL 767 (1249)
T ss_dssp EEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETT---SSSEEEEECCCSSCEEEEEECSSTTE-EEEEESSSEE
T ss_pred EEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECC---CcchhheecCCCCCEEEEEEecCCCE-EEEEECCCeE
Confidence 2 36778999999995 34589999999999999998 56778888999999999999999995 9999999999
Q ss_pred EEEeCCCCceee-----------------------------------------------------e-EeccCCCceEEEE
Q psy4571 175 ALWDLRNLKLKL-----------------------------------------------------H-SFESHKDEIFQVQ 200 (437)
Q Consensus 175 ~lwd~~~~~~~~-----------------------------------------------------~-~~~~h~~~v~~v~ 200 (437)
++||++++.... . ...+|...|.+++
T Consensus 768 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~ 847 (1249)
T 3sfz_A 768 RLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCD 847 (1249)
T ss_dssp EEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEE
T ss_pred EEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEE
Confidence 999987643210 0 1126778899999
Q ss_pred EcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeC
Q psy4571 201 WSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCD 280 (437)
Q Consensus 201 ~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~ 280 (437)
|+|+++ ++++++.||.|++||+.++ ..+..+.+|...|.+++|+|+++ .+++++.||.|++||+
T Consensus 848 ~sp~~~-~l~~~~~dg~v~vwd~~~~--------------~~~~~~~~h~~~v~~v~~spdg~-~l~s~s~dg~v~vw~~ 911 (1249)
T 3sfz_A 848 FSPYDH-LAVIALSQYCVELWNIDSR--------------LKVADCRGHLSWVHGVMFSPDGS-SFLTASDDQTIRVWET 911 (1249)
T ss_dssp ECSSTT-EEEEECSSSCEEEEETTTT--------------EEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEEH
T ss_pred EcCCCC-EEEEEeCCCeEEEEEcCCC--------------ceeeecCCCccceEEEEECCCCC-EEEEEeCCCeEEEEEc
Confidence 999998 5889999999999999875 33455678888888888888887 6778888888888875
Q ss_pred CC------------------------------------------------------------------------------
Q psy4571 281 ST------------------------------------------------------------------------------ 282 (437)
Q Consensus 281 ~~------------------------------------------------------------------------------ 282 (437)
.+
T Consensus 912 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~ 991 (1249)
T 3sfz_A 912 KKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELP 991 (1249)
T ss_dssp HHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETT
T ss_pred cccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcC
Confidence 32
Q ss_pred -CCCceeeeeeecccCCceeeeecCCCCcccccCCCCccccccccc-----------------------------ccccc
Q psy4571 283 -DSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNY-----------------------------WQGLV 332 (437)
Q Consensus 283 -~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~-----------------------------~~~i~ 332 (437)
++.... ...+...+..++|+|+|+++++++.|+.+.+|+... ...++
T Consensus 992 ~~~~~~~---~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~v~ 1068 (1249)
T 3sfz_A 992 NNRVFSS---GVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYVFLQAHQETVKDFRLLQDSRLLSWSFDGTVK 1068 (1249)
T ss_dssp TTSCEEE---CCCCSSCCCCEEECSSSSCEEEECSSSBEEEEETTTTEEECCBCCSSCEEEEEECSSSEEEEEESSSEEE
T ss_pred CCceeee---cccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCceEEEecCCCcEEEEEEcCCCcEEEEECCCcEE
Confidence 111111 112445566789999999999999999999996442 23488
Q ss_pred cccchhhhhhhhhcCCCccccccCCCCCCcccccc-------ccccCH
Q psy4571 333 LFDILVCEEQRQLLGTEEESSDRHSSDNDTEDLNS-------IWSMTD 373 (437)
Q Consensus 333 ~wd~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~-------~w~~~~ 373 (437)
+||+.+++....+.+|...+..+.++|++..+++. +|++..
T Consensus 1069 vwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~~v~iwd~~~ 1116 (1249)
T 3sfz_A 1069 VWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFDL 1116 (1249)
T ss_dssp EEETTTTCCCEEEECCSSCCCCEEECSSSSSCEEECCSSCCCEECSSS
T ss_pred EEECCCCceeEEEcccCCcEEEEEECCCCCEEEEEcCCCcEEEEECCC
Confidence 99999999999999999999999999999877664 888743
No 41
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-34 Score=284.61 Aligned_cols=258 Identities=11% Similarity=0.079 Sum_probs=193.3
Q ss_pred cceeEEEEeeCCCc---------ceEEEeeccCceEeeecCCCceeEEEecCCCCeE-EEecCceEEEEEeeeccc----
Q psy4571 34 IYRFYRLCVAEPFD---------DAVEERVINEEYKIWKKNTPFLYDLVVNNYVANI-SCILNISILFFEIIFTQN---- 99 (437)
Q Consensus 34 ~~~v~~~~~~~~~~---------~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i-~~~~~~~i~~~~~~~~~~---- 99 (437)
...|++++|+ |++ .++|+|+.++... ..++....+ +++.|++|+||++...+.
T Consensus 133 ~~~V~sv~w~-p~~~~~~~~~~~~~LAv~~~~~~~~------------~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~ 199 (524)
T 2j04_B 133 GGLVTDIAWL-NIEENTDIGKDIQYLAVAVSQYMDE------------PLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVK 199 (524)
T ss_dssp CC--CCCSCE-EECCCCSSCSSEEEEEEEEEC------------------------------CEEEEEEEEETTTCCEEE
T ss_pred CCceeEEEec-ccCCCCccCcCCeEEEEEEecccCC------------ccchhhhhhccCCCCceEEEEEccCCCCCceE
Confidence 4578889898 665 7899988775310 012333333 677899999999765442
Q ss_pred ---cc-cCCCcceEEeeCC-----CCCEEEEEECCCcEEEEEcCCCCCC--------CCeeeeccCCCCeEEEEEeCCCC
Q psy4571 100 ---FP-FPLSRQDVAWHLL-----HESLFGSVADDQKLMIWDTRSHNVS--------KPSHTVDAHTAEVNCLSFNPYSE 162 (437)
Q Consensus 100 ---~~-~~~~v~~~~~sp~-----~~~~l~~~~~dg~v~vwd~~~~~~~--------~~~~~~~~h~~~v~~l~~~~~~~ 162 (437)
+. +...|.+++|+|. ++.+||+|+.||+|++||+...... .+...+.+|...|.+++|+|++
T Consensus 200 ~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~- 278 (524)
T 2j04_B 200 VQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT- 278 (524)
T ss_dssp EEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS-
T ss_pred EEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC-
Confidence 22 3467999999995 2579999999999999999754211 2345778999999999999864
Q ss_pred cEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEE--EEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCC
Q psy4571 163 YILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQV--QWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPP 240 (437)
Q Consensus 163 ~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v--~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~ 240 (437)
.|++|+.||+|++||++++..+...+.+|...|.++ +|+|+++.+|+||+.|++|++||+++.+...
T Consensus 279 -~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~---------- 347 (524)
T 2j04_B 279 -TVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTK---------- 347 (524)
T ss_dssp -EEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHC----------
T ss_pred -eEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCccc----------
Confidence 499999999999999998666566788999999999 5678773479999999999999998754322
Q ss_pred ceEEEecCccc--cEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCC
Q psy4571 241 ELLFIHGGHTA--KISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTP 318 (437)
Q Consensus 241 ~~~~~~~~h~~--~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~ 318 (437)
.+.+|.. .|.+++|+|+++ .+++++.|++|++||++++.+...+.. |...+..++|+|+|.++++|+.|+
T Consensus 348 ----~~~~~~~~~~v~~v~fsp~~~-~l~s~~~d~tv~lwd~~~~~~~~~l~g---H~~~V~sva~Sp~g~~l~Sgs~Dg 419 (524)
T 2j04_B 348 ----TTVSRFRGSNLVPVVYCPQIY-SYIYSDGASSLRAVPSRAAFAVHPLVS---RETTITAIGVSRLHPMVLAGSADG 419 (524)
T ss_dssp ----EEEEECSCCSCCCEEEETTTT-EEEEECSSSEEEEEETTCTTCCEEEEE---CSSCEEEEECCSSCCBCEEEETTT
T ss_pred ----ccccccccCcccceEeCCCcC-eEEEeCCCCcEEEEECcccccceeeec---CCCceEEEEeCCCCCeEEEEECCC
Confidence 2344542 478999999999 688999999999999999887776653 667788889999999999999999
Q ss_pred cccccc
Q psy4571 319 TNSVHE 324 (437)
Q Consensus 319 ~~~~~~ 324 (437)
++++|+
T Consensus 420 tv~lwd 425 (524)
T 2j04_B 420 SLIITN 425 (524)
T ss_dssp EEECCB
T ss_pred EEEEEe
Confidence 965553
No 42
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1.8e-32 Score=255.23 Aligned_cols=264 Identities=14% Similarity=0.191 Sum_probs=222.2
Q ss_pred ccceeEEEEeeCCCcceEEEeeccCceEeeecC----------------CCceeEEEecCCCCeE-EEecCceEEEEEee
Q psy4571 33 SIYRFYRLCVAEPFDDAVEERVINEEYKIWKKN----------------TPFLYDLVVNNYVANI-SCILNISILFFEII 95 (437)
Q Consensus 33 ~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~----------------~~~~~~~~~~~~~~~i-~~~~~~~i~~~~~~ 95 (437)
+...|.+++|+ |+++++++++ |+.+++|+.. ...+..+.+++....+ ++..++.|++||+.
T Consensus 50 h~~~v~~~~~~-~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~ 127 (337)
T 1gxr_A 50 HGEVVCAVTIS-NPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLA 127 (337)
T ss_dssp CSSCCCEEEEC-SSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECC
T ss_pred CCCceEEEEEe-cCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECC
Confidence 45678999999 9999999999 9999999943 3456778888887766 56678999999976
Q ss_pred eccc------cccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEe
Q psy4571 96 FTQN------FPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGS 169 (437)
Q Consensus 96 ~~~~------~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs 169 (437)
..+. ..+...+.+++|+| ++.++++++.||.|++||++ ..+.+..+..|...|.+++|+|++.. |++++
T Consensus 128 ~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~v~~~d~~---~~~~~~~~~~~~~~i~~~~~~~~~~~-l~~~~ 202 (337)
T 1gxr_A 128 APTPRIKAELTSSAPACYALAISP-DSKVCFSCCSDGNIAVWDLH---NQTLVRQFQGHTDGASCIDISNDGTK-LWTGG 202 (337)
T ss_dssp CC--EEEEEEECSSSCEEEEEECT-TSSEEEEEETTSCEEEEETT---TTEEEEEECCCSSCEEEEEECTTSSE-EEEEE
T ss_pred CCCcceeeecccCCCceEEEEECC-CCCEEEEEeCCCcEEEEeCC---CCceeeeeecccCceEEEEECCCCCE-EEEEe
Confidence 5441 12456799999999 68899999999999999998 55677888899999999999999985 99999
Q ss_pred CCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCc
Q psy4571 170 ADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGH 249 (437)
Q Consensus 170 ~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h 249 (437)
.||.|++||+++++. ...+ .+...+.+++|+|+++ .+++++.|+.|++||++... ......|
T Consensus 203 ~dg~i~~~d~~~~~~-~~~~-~~~~~v~~~~~s~~~~-~l~~~~~~~~i~~~~~~~~~---------------~~~~~~~ 264 (337)
T 1gxr_A 203 LDNTVRSWDLREGRQ-LQQH-DFTSQIFSLGYCPTGE-WLAVGMESSNVEVLHVNKPD---------------KYQLHLH 264 (337)
T ss_dssp TTSEEEEEETTTTEE-EEEE-ECSSCEEEEEECTTSS-EEEEEETTSCEEEEETTSSC---------------EEEECCC
T ss_pred cCCcEEEEECCCCce-Eeee-cCCCceEEEEECCCCC-EEEEEcCCCcEEEEECCCCC---------------eEEEcCC
Confidence 999999999998654 4444 4788999999999998 58899999999999998753 2346789
Q ss_pred cccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCccccccccccc
Q psy4571 250 TAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQ 329 (437)
Q Consensus 250 ~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~ 329 (437)
...|.+++|+|+++ ++++++.||.|++||+++++...... +...+..++|+|+++++++++.|+.
T Consensus 265 ~~~v~~~~~~~~~~-~l~~~~~dg~i~~~~~~~~~~~~~~~----~~~~v~~~~~s~~~~~l~~~~~dg~---------- 329 (337)
T 1gxr_A 265 ESCVLSLKFAYCGK-WFVSTGKDNLLNAWRTPYGASIFQSK----ESSSVLSCDISVDDKYIVTGSGDKK---------- 329 (337)
T ss_dssp SSCEEEEEECTTSS-EEEEEETTSEEEEEETTTCCEEEEEE----CSSCEEEEEECTTSCEEEEEETTSC----------
T ss_pred ccceeEEEECCCCC-EEEEecCCCcEEEEECCCCeEEEEec----CCCcEEEEEECCCCCEEEEecCCCe----------
Confidence 99999999999999 78899999999999999987663332 4566777899999999999999998
Q ss_pred ccccccch
Q psy4571 330 GLVLFDIL 337 (437)
Q Consensus 330 ~i~~wd~~ 337 (437)
+++||+.
T Consensus 330 -i~iw~~~ 336 (337)
T 1gxr_A 330 -ATVYEVI 336 (337)
T ss_dssp -EEEEEEE
T ss_pred -EEEEEEe
Confidence 7777763
No 43
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.1e-33 Score=290.07 Aligned_cols=284 Identities=16% Similarity=0.204 Sum_probs=224.1
Q ss_pred cccccceeEEEEeeCCCcceEEEeeccCceEeeecCCCce-eEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcce
Q psy4571 30 LSHSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFL-YDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQD 108 (437)
Q Consensus 30 ~~~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~-~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~ 108 (437)
+.-+...|.+++|+..++++|+||+.|++|++|+...... .... ......|...|.+
T Consensus 378 l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~----------------------~~~~~~h~~~v~~ 435 (694)
T 3dm0_A 378 MRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVA----------------------QRRLTGHSHFVED 435 (694)
T ss_dssp EECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEE----------------------EEEEECCSSCEEE
T ss_pred cccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccc----------------------cceecCCCCcEEE
Confidence 4456778999999944568999999999999999764321 1000 0011235678899
Q ss_pred EEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeE
Q psy4571 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHS 188 (437)
Q Consensus 109 ~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~ 188 (437)
++|+| ++.+|++|+.||+|++||+. .......+.+|...|.+++|+|++.. |++|+.|++|++||...... ...
T Consensus 436 v~~s~-~g~~l~sgs~Dg~v~vwd~~---~~~~~~~~~~h~~~v~~~~~s~~~~~-l~s~s~D~~i~iwd~~~~~~-~~~ 509 (694)
T 3dm0_A 436 VVLSS-DGQFALSGSWDGELRLWDLA---AGVSTRRFVGHTKDVLSVAFSLDNRQ-IVSASRDRTIKLWNTLGECK-YTI 509 (694)
T ss_dssp EEECT-TSSEEEEEETTSEEEEEETT---TTEEEEEEECCSSCEEEEEECTTSSC-EEEEETTSCEEEECTTSCEE-EEE
T ss_pred EEECC-CCCEEEEEeCCCcEEEEECC---CCcceeEEeCCCCCEEEEEEeCCCCE-EEEEeCCCEEEEEECCCCcc-eee
Confidence 99999 68999999999999999998 55677888999999999999999996 99999999999999876332 222
Q ss_pred ---eccCCCceEEEEEcCCCC-cEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCe
Q psy4571 189 ---FESHKDEIFQVQWSPHNE-TILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 264 (437)
Q Consensus 189 ---~~~h~~~v~~v~~~p~~~-~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~ 264 (437)
..+|...|.+++|+|++. ..+++|+.|+.|++||+++. +....+.+|...|++++|+|+++
T Consensus 510 ~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~--------------~~~~~~~~h~~~v~~v~~spdg~- 574 (694)
T 3dm0_A 510 SEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNC--------------KLRSTLAGHTGYVSTVAVSPDGS- 574 (694)
T ss_dssp CSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTC--------------CEEEEECCCSSCEEEEEECTTSS-
T ss_pred ccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCC--------------cEEEEEcCCCCCEEEEEEeCCCC-
Confidence 246888999999999862 36899999999999999875 33456889999999999999999
Q ss_pred EEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhh
Q psy4571 265 VICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQ 344 (437)
Q Consensus 265 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~ 344 (437)
++++|+.||.|++||+++++.+..+. ....+..++|+|++.++++++.++ |++||+.+++.+..
T Consensus 575 ~l~sg~~Dg~i~iwd~~~~~~~~~~~----~~~~v~~~~~sp~~~~l~~~~~~~------------i~iwd~~~~~~~~~ 638 (694)
T 3dm0_A 575 LCASGGKDGVVLLWDLAEGKKLYSLE----ANSVIHALCFSPNRYWLCAATEHG------------IKIWDLESKSIVED 638 (694)
T ss_dssp EEEEEETTSBCEEEETTTTEEEECCB----CSSCEEEEEECSSSSEEEEEETTE------------EEEEETTTTEEEEE
T ss_pred EEEEEeCCCeEEEEECCCCceEEEec----CCCcEEEEEEcCCCcEEEEEcCCC------------EEEEECCCCCChhh
Confidence 89999999999999999987665543 244566779999999988876543 79999988887766
Q ss_pred hcCCCc-------------------cccccCCCCCCcccccc-------ccccC
Q psy4571 345 LLGTEE-------------------ESSDRHSSDNDTEDLNS-------IWSMT 372 (437)
Q Consensus 345 ~~~h~~-------------------~~~~~~~~~~~~~~~~~-------~w~~~ 372 (437)
+..+.. .+..+.++|+|..++++ +|++.
T Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 639 LKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp ECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred hccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEecc
Confidence 543321 24567789999887765 77763
No 44
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=3.5e-33 Score=266.67 Aligned_cols=278 Identities=15% Similarity=0.158 Sum_probs=221.3
Q ss_pred CcccccceeEEEEeeCCCcceEEEeeccCceEeeecCCC-----------------ceeEEEecCC----C---CeE-EE
Q psy4571 29 PLSHSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTP-----------------FLYDLVVNNY----V---ANI-SC 83 (437)
Q Consensus 29 ~~~~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~-----------------~~~~~~~~~~----~---~~i-~~ 83 (437)
.+.-+.-.|.+++|+ | ++|++|+.|+.|++|+..++ .+..+.|.+. . ..+ ++
T Consensus 11 ~~~~h~~~i~~~~~~-~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~ 87 (397)
T 1sq9_A 11 AGKAHDADIFSVSAC-N--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATT 87 (397)
T ss_dssp ESSCSSSCEEEEEEC-S--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEE
T ss_pred hhhhhhcCeEEEEec-C--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEE
Confidence 345567789999998 6 89999999999999996543 3566777776 4 444 66
Q ss_pred ecCceEEEEEeeeccc-----c----cc-----CCCcceEEee----CCCCCE-EEEEECCCcEEEEEcCCCCC---CCC
Q psy4571 84 ILNISILFFEIIFTQN-----F----PF-----PLSRQDVAWH----LLHESL-FGSVADDQKLMIWDTRSHNV---SKP 141 (437)
Q Consensus 84 ~~~~~i~~~~~~~~~~-----~----~~-----~~~v~~~~~s----p~~~~~-l~~~~~dg~v~vwd~~~~~~---~~~ 141 (437)
..|+.|++|++...+. . .+ ...|.+++|+ | ++.+ |++++.||.|++||+..... ...
T Consensus 88 ~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 166 (397)
T 1sq9_A 88 SFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDR-LLSHRLVATDVKGTTYIWKFHPFADESNSLT 166 (397)
T ss_dssp ETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC-----CEEEEEEETTSCEEEEEEESSSSHHHHTT
T ss_pred cCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCC-CCceEEEEEeCCCcEEEEeCCccccccccce
Confidence 7899999999876553 2 13 3789999999 8 6778 99999999999999985000 233
Q ss_pred ee-----ee-------ccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEecc---C---CCceEEEEEcC
Q psy4571 142 SH-----TV-------DAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFES---H---KDEIFQVQWSP 203 (437)
Q Consensus 142 ~~-----~~-------~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~---h---~~~v~~v~~~p 203 (437)
+. .+ ..|...|.+++|+|++ . |++++.||.|++||+++.+. +..+.. | ...|.+++|+|
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~-l~~~~~dg~i~i~d~~~~~~-~~~~~~~~~h~~~~~~i~~i~~~~ 243 (397)
T 1sq9_A 167 LNWSPTLELQGTVESPMTPSQFATSVDISERG-L-IATGFNNGTVQISELSTLRP-LYNFESQHSMINNSNSIRSVKFSP 243 (397)
T ss_dssp TCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-E-EEEECTTSEEEEEETTTTEE-EEEEECCC---CCCCCEEEEEECS
T ss_pred eeccCcceeeeeeccccCCCCCceEEEECCCc-e-EEEEeCCCcEEEEECCCCce-eEEEeccccccccCCccceEEECC
Confidence 33 55 4588999999999999 5 99999999999999998554 778888 8 99999999999
Q ss_pred CCCcEEEEEeCC---CeEEEEEcCCCCCCCCCCCCCCCCCceEEEecC-------------ccccEEEEEEccCCCeEEE
Q psy4571 204 HNETILASSGTD---RRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGG-------------HTAKISDFSWNPNEPWVIC 267 (437)
Q Consensus 204 ~~~~~l~sg~~d---g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~-------------h~~~v~~l~~~p~~~~~l~ 267 (437)
+++ +|++++.| +.|++||+++.+. +..+.+ |...|.+++|+|+++ +|+
T Consensus 244 ~~~-~l~~~~~d~~~g~i~i~d~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~ 307 (397)
T 1sq9_A 244 QGS-LLAIAHDSNSFGCITLYETEFGER--------------IGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGE-TLC 307 (397)
T ss_dssp STT-EEEEEEEETTEEEEEEEETTTCCE--------------EEEECBC--------CCBSBSSCEEEEEECSSSS-EEE
T ss_pred CCC-EEEEEecCCCCceEEEEECCCCcc--------------cceeccCcccccccccccccCCcEEEEEECCCCC-EEE
Confidence 998 58899999 9999999987643 344566 899999999999999 788
Q ss_pred EEeCCCeEEEEeCCCCCCceeeeeee---cc---------------cCCceeeeecCCC----------CcccccCCCCc
Q psy4571 268 SVSEDNIMQEYCDSTDSDTKTMRLDS---IR---------------SNGGISSTASPTA----------SSTASESPTPT 319 (437)
Q Consensus 268 s~~~dg~i~iwd~~~~~~~~~~~~~~---~~---------------~~~~~~~~~s~~g----------~~l~s~s~d~~ 319 (437)
+++.||.|++||+++++.+..+.... .+ ...+..++|+|+| .++++++.|+.
T Consensus 308 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~ 387 (397)
T 1sq9_A 308 SAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRS 387 (397)
T ss_dssp EEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTE
T ss_pred EEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCc
Confidence 99999999999999988777766210 12 5667788999999 78999999998
Q ss_pred ccccccccccccccccchhhh
Q psy4571 320 NSVHEKNYWQGLVLFDILVCE 340 (437)
Q Consensus 320 ~~~~~~~~~~~i~~wd~~~~~ 340 (437)
|++||+.+|+
T Consensus 388 -----------i~iw~~~~g~ 397 (397)
T 1sq9_A 388 -----------IRWFREAGGK 397 (397)
T ss_dssp -----------EEEEEEEC--
T ss_pred -----------EEEEEcCCCC
Confidence 8999998774
No 45
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=1.3e-33 Score=267.01 Aligned_cols=271 Identities=11% Similarity=-0.006 Sum_probs=200.3
Q ss_pred cceeEEEEeeCCCcceEEEeeccC-------ceEeeecCCCc---------------------eeEEEecCCCCeEEE--
Q psy4571 34 IYRFYRLCVAEPFDDAVEERVINE-------EYKIWKKNTPF---------------------LYDLVVNNYVANISC-- 83 (437)
Q Consensus 34 ~~~v~~~~~~~~~~~~l~tgs~d~-------~v~iw~~~~~~---------------------~~~~~~~~~~~~i~~-- 83 (437)
.|.||+++|+ |++.+|++|+.|. .|++|+...+. +..+.+. ...+.+
T Consensus 14 g~PV~sv~fs-~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~--~~~~~~g~ 90 (365)
T 4h5i_A 14 GYPAYGAKFL-NNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDAS--KGIILVGC 90 (365)
T ss_dssp SSCEEEEEEE-ETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEE--TTEEEEEC
T ss_pred CCCEEEEEEe-CCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeC--CCEEEEEE
Confidence 4789999999 9999999998654 59999954321 1222221 122221
Q ss_pred ----------ecCceEEEEEeeecccc-------------ccCCCcceEEeeCCCCCEEEE--EECCCcEEEEEcCCCCC
Q psy4571 84 ----------ILNISILFFEIIFTQNF-------------PFPLSRQDVAWHLLHESLFGS--VADDQKLMIWDTRSHNV 138 (437)
Q Consensus 84 ----------~~~~~i~~~~~~~~~~~-------------~~~~~v~~~~~sp~~~~~l~~--~~~dg~v~vwd~~~~~~ 138 (437)
..++.+++|++...... .....+.+++|+| ++.++++ ++.|++|+|||++ .
T Consensus 91 ~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSp-Dg~~la~as~~~d~~i~iwd~~---~ 166 (365)
T 4h5i_A 91 NENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISR-EGTVAAIASSKVPAIMRIIDPS---D 166 (365)
T ss_dssp CCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECT-TSSCEEEEESCSSCEEEEEETT---T
T ss_pred CCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcC-CCCEEEEEECCCCCEEEEeECC---C
Confidence 24667999986533210 1123478999999 5666654 4478999999998 4
Q ss_pred CCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceee-eEeccCCCceEEEEEcCCCCcEEEEEeCCC-
Q psy4571 139 SKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKL-HSFESHKDEIFQVQWSPHNETILASSGTDR- 216 (437)
Q Consensus 139 ~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~-~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg- 216 (437)
.+.+..+ .|.+.|.+++|+|+|+. +++++.+ .+.+|+..+++... .....|...|.+++|+|+++ .+++++.|+
T Consensus 167 ~~~~~~~-~~~~~V~~v~fspdg~~-l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~-~l~~~s~d~~ 242 (365)
T 4h5i_A 167 LTEKFEI-ETRGEVKDLHFSTDGKV-VAYITGS-SLEVISTVTGSCIARKTDFDKNWSLSKINFIADDT-VLIAASLKKG 242 (365)
T ss_dssp TEEEEEE-ECSSCCCEEEECTTSSE-EEEECSS-CEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTE-EEEEEEESSS
T ss_pred CcEEEEe-CCCCceEEEEEccCCce-EEeccce-eEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCC-EEEEEecCCc
Confidence 5566665 47788999999999994 8888755 56666666655433 33456888999999999998 488888777
Q ss_pred ---eEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeee
Q psy4571 217 ---RLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDS 293 (437)
Q Consensus 217 ---~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 293 (437)
.+++|++....... .....+.+|...|++++|+|+|+ +|++|+.|++|++||+++++++..+. .
T Consensus 243 ~~~~i~~~~~~~~~~~~----------~~~~~~~~~~~~V~~~~~Spdg~-~lasgs~D~~V~iwd~~~~~~~~~~~--~ 309 (365)
T 4h5i_A 243 KGIVLTKISIKSGNTSV----------LRSKQVTNRFKGITSMDVDMKGE-LAVLASNDNSIALVKLKDLSMSKIFK--Q 309 (365)
T ss_dssp CCEEEEEEEEETTEEEE----------EEEEEEESSCSCEEEEEECTTSC-EEEEEETTSCEEEEETTTTEEEEEET--T
T ss_pred ceeEEeecccccceecc----------eeeeeecCCCCCeEeEEECCCCC-ceEEEcCCCEEEEEECCCCcEEEEec--C
Confidence 68889887643211 12345678999999999999999 89999999999999999987766542 2
Q ss_pred cccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhh
Q psy4571 294 IRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVC 339 (437)
Q Consensus 294 ~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~ 339 (437)
.|...+..++|||||++|++|+.|++ |++||+...
T Consensus 310 gH~~~V~~v~fSpdg~~laS~S~D~t-----------vrvw~ip~~ 344 (365)
T 4h5i_A 310 AHSFAITEVTISPDSTYVASVSAANT-----------IHIIKLPLN 344 (365)
T ss_dssp SSSSCEEEEEECTTSCEEEEEETTSE-----------EEEEECCTT
T ss_pred cccCCEEEEEECCCCCEEEEEeCCCe-----------EEEEEcCCC
Confidence 35667888899999999999999999 899998643
No 46
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.5e-32 Score=257.48 Aligned_cols=285 Identities=15% Similarity=0.191 Sum_probs=235.5
Q ss_pred ecCCcccccceeEEEEeeCCCcceEEEeeccCceEeeec-----------CCCceeEEEecCCCCeE-EEecCceEEEEE
Q psy4571 26 SALPLSHSIYRFYRLCVAEPFDDAVEERVINEEYKIWKK-----------NTPFLYDLVVNNYVANI-SCILNISILFFE 93 (437)
Q Consensus 26 ~~~~~~~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~-----------~~~~~~~~~~~~~~~~i-~~~~~~~i~~~~ 93 (437)
+...+.-+.-.|.+++|+ |++++|++|+.|+.|++|+. +.+.+..+.+++....+ ++..|+.|++||
T Consensus 24 ~~~~l~~h~~~v~~~~~s-~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd 102 (369)
T 3zwl_B 24 KAIKLTGHERPLTQVKYN-KEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWD 102 (369)
T ss_dssp EEEEEECCSSCEEEEEEC-TTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEE
T ss_pred ccEEEEEeeceEEEEEEc-CCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEE
Confidence 334456667789999999 99999999999999999994 45667888888877666 667899999999
Q ss_pred eeecc---ccccCCCcceEEeeCCCCCEEEEEECC-----CcEEEEEcCCCCCC--------CCeeeeccCCC--CeEEE
Q psy4571 94 IIFTQ---NFPFPLSRQDVAWHLLHESLFGSVADD-----QKLMIWDTRSHNVS--------KPSHTVDAHTA--EVNCL 155 (437)
Q Consensus 94 ~~~~~---~~~~~~~v~~~~~sp~~~~~l~~~~~d-----g~v~vwd~~~~~~~--------~~~~~~~~h~~--~v~~l 155 (437)
+...+ .+.+...+.+++|+| ++.++++++.+ |.|++||+...... .....+..|.+ .+.++
T Consensus 103 ~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (369)
T 3zwl_B 103 VSNGQCVATWKSPVPVKRVEFSP-CGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVA 181 (369)
T ss_dssp TTTCCEEEEEECSSCEEEEEECT-TSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEE
T ss_pred CCCCcEEEEeecCCCeEEEEEcc-CCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEE
Confidence 76543 344678999999999 68899999998 99999999854321 23445556666 89999
Q ss_pred EEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCC
Q psy4571 156 SFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDA 235 (437)
Q Consensus 156 ~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~ 235 (437)
+|+|++.. |++++.||.|++||+++.......+..|...|.+++|+|+++ .|++++.|+.|++||+++...
T Consensus 182 ~~~~~~~~-l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~v~d~~~~~~------- 252 (369)
T 3zwl_B 182 GWSTKGKY-IIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLT-YFITSSRDTNSFLVDVSTLQV------- 252 (369)
T ss_dssp EECGGGCE-EEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTCCE-------
T ss_pred EEcCCCCE-EEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCC-EEEEecCCceEEEEECCCCce-------
Confidence 99999995 999999999999999985555888889999999999999998 589999999999999988643
Q ss_pred CCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCC--------------eEEEEeCCCCCCceeeeeeecccCCcee
Q psy4571 236 EDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN--------------IMQEYCDSTDSDTKTMRLDSIRSNGGIS 301 (437)
Q Consensus 236 ~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg--------------~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 301 (437)
+..+. +...+.+++|+|+++ .+++++.++ .+++||..+++....+.. +...+..
T Consensus 253 -------~~~~~-~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~---~~~~v~~ 320 (369)
T 3zwl_B 253 -------LKKYE-TDCPLNTAVITPLKE-FIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQG---HFGPLNT 320 (369)
T ss_dssp -------EEEEE-CSSCEEEEEECSSSS-EEEEEECCC-------------CEEEEEETTTCCEEEEEEC---CSSCEEE
T ss_pred -------eeeec-CCCCceeEEecCCCc-eEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheec---ccCcEEE
Confidence 23333 677899999999999 677888777 899999999987776653 5567778
Q ss_pred eeecCCCCcccccCCCCcccccccccccccccccchhhhhhhh
Q psy4571 302 STASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQ 344 (437)
Q Consensus 302 ~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~ 344 (437)
++|+|+|++|++++.|+. +++||+..+.....
T Consensus 321 ~~~s~~~~~l~s~~~dg~-----------v~iw~~~~~~~~~~ 352 (369)
T 3zwl_B 321 VAISPQGTSYASGGEDGF-----------IRLHHFEKSYFDFK 352 (369)
T ss_dssp EEECTTSSEEEEEETTSE-----------EEEEEECHHHHTCC
T ss_pred EEECCCCCEEEEEcCCCe-----------EEEEECccccchhH
Confidence 899999999999999998 88999988765443
No 47
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.5e-33 Score=265.74 Aligned_cols=285 Identities=12% Similarity=0.156 Sum_probs=224.9
Q ss_pred cccceeEEEEeeCC----CcceEEEeeccCceEeeecCC----------------CceeEEEecCCCC-----eEEEecC
Q psy4571 32 HSIYRFYRLCVAEP----FDDAVEERVINEEYKIWKKNT----------------PFLYDLVVNNYVA-----NISCILN 86 (437)
Q Consensus 32 ~~~~~v~~~~~~~~----~~~~l~tgs~d~~v~iw~~~~----------------~~~~~~~~~~~~~-----~i~~~~~ 86 (437)
-+.-.|.+++|+ | ....+++++.++.|++|+..+ +.+..+.|++... .+++..|
T Consensus 16 ~h~~~v~~i~~~-p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d 94 (366)
T 3k26_A 16 DHNQPLFGVQFN-WHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSR 94 (366)
T ss_dssp TTCSCEEEEEEC-TTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETT
T ss_pred CCCCceEEEEEe-cccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCC
Confidence 345689999999 6 356677777788999999542 4466777877632 3477889
Q ss_pred ceEEEEEeeeccc---c-ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeee---ccCCCCeEEEEEeC
Q psy4571 87 ISILFFEIIFTQN---F-PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTV---DAHTAEVNCLSFNP 159 (437)
Q Consensus 87 ~~i~~~~~~~~~~---~-~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~---~~h~~~v~~l~~~~ 159 (437)
+.|++||+...+. + .+...|.+++|+|.++.+|++|+.||.|++||+. ..+.+..+ .+|...|.+++|+|
T Consensus 95 g~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~---~~~~~~~~~~~~~~~~~v~~~~~~~ 171 (366)
T 3k26_A 95 GIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQ---TDTLVAIFGGVEGHRDEVLSADYDL 171 (366)
T ss_dssp CEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETT---TTEEEEEECSTTSCSSCEEEEEECT
T ss_pred CEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEee---cCeEEEEecccccccCceeEEEECC
Confidence 9999999764432 2 3678999999999778899999999999999998 44556666 68999999999999
Q ss_pred CCCcEEEEEeCCCeEEEEeCCCCceeeeE----------------------------eccCCCceEEEEEcCCCCcEEEE
Q psy4571 160 YSEYILATGSADKTVALWDLRNLKLKLHS----------------------------FESHKDEIFQVQWSPHNETILAS 211 (437)
Q Consensus 160 ~~~~~l~sgs~dg~i~lwd~~~~~~~~~~----------------------------~~~h~~~v~~v~~~p~~~~~l~s 211 (437)
++.. |++++.||.|++||+++++. ... ...|...|.+++|+ ++ ++++
T Consensus 172 ~~~~-l~~~~~dg~i~i~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~-~l~~ 246 (366)
T 3k26_A 172 LGEK-IMSCGMDHSLKLWRINSKRM-MNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GD-LILS 246 (366)
T ss_dssp TSSE-EEEEETTSCEEEEESCSHHH-HHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TT-EEEE
T ss_pred CCCE-EEEecCCCCEEEEECCCCcc-ccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CC-EEEE
Confidence 9995 99999999999999997542 222 22389999999999 55 6999
Q ss_pred EeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccC--CCeEEEEEeCCCeEEEEeCCCCCCceee
Q psy4571 212 SGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPN--EPWVICSVSEDNIMQEYCDSTDSDTKTM 289 (437)
Q Consensus 212 g~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~--~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 289 (437)
++.|+.|++||+++.................+..+.+|...|.+++|+|+ ++ +|++|+.||.|++||+++++.....
T Consensus 247 ~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~-~l~~~~~dg~i~vwd~~~~~~~~~~ 325 (366)
T 3k26_A 247 KSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQK-MLALGNQVGKLYVWDLEVEDPHKAK 325 (366)
T ss_dssp ECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSS-EEEEECTTSCEEEEECCSSSGGGCE
T ss_pred EecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCc-EEEEEecCCcEEEEECCCCCCcccc
Confidence 99999999999988765443333333344567788899999999999999 88 8889999999999999998766522
Q ss_pred e-eeecc--cCCceeeeecCCCCcccccCCCCcccccccccccccccccch
Q psy4571 290 R-LDSIR--SNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDIL 337 (437)
Q Consensus 290 ~-~~~~~--~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~ 337 (437)
. ....+ ...+..++|+|++++|++++.|+. |++||+.
T Consensus 326 ~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~-----------i~iwd~~ 365 (366)
T 3k26_A 326 CTTLTHHKCGAAIRQTSFSRDSSILIAVCDDAS-----------IWRWDRL 365 (366)
T ss_dssp EEEECCTTCCSCEEEEEECTTSSEEEEEETTSE-----------EEEEEC-
T ss_pred ceEEcccccCCceEEEEeCCCCCeEEEEeCCCE-----------EEEEEec
Confidence 2 11222 466778899999999999999998 7888875
No 48
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-33 Score=296.27 Aligned_cols=188 Identities=9% Similarity=0.092 Sum_probs=154.7
Q ss_pred cceeEEEEeeCCCcceEEEeeccCceEeeecC----------CCceeEEEecCCCC-eEEEecCceEEEEEeeecc---c
Q psy4571 34 IYRFYRLCVAEPFDDAVEERVINEEYKIWKKN----------TPFLYDLVVNNYVA-NISCILNISILFFEIIFTQ---N 99 (437)
Q Consensus 34 ~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~----------~~~~~~~~~~~~~~-~i~~~~~~~i~~~~~~~~~---~ 99 (437)
...|.+++|+ |++.+||+|+.|++|++|+.. ...+..+.|++ +. .++++.|++|++||+...+ .
T Consensus 17 ~~~V~~lafs-pdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~ 94 (902)
T 2oaj_A 17 SSKPIAAAFD-FTQNLLAIATVTGEVHIYGQQQVEVVIKLEDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKVLTT 94 (902)
T ss_dssp SSCEEEEEEE-TTTTEEEEEETTSEEEEECSTTCEEEEECSSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCSEEEE
T ss_pred CCCcEEEEEC-CCCCEEEEEeCCCEEEEEeCCCcEEEEEcCCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCcEEEE
Confidence 5679999999 999999999999999999843 35578888888 55 5588899999999976543 3
Q ss_pred cccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCe---------eeeccCCCCeEEEEEeCCCCcEEEEEeC
Q psy4571 100 FPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPS---------HTVDAHTAEVNCLSFNPYSEYILATGSA 170 (437)
Q Consensus 100 ~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~---------~~~~~h~~~v~~l~~~~~~~~~l~sgs~ 170 (437)
+.++..|++++|+| ++.+|++|+.||.|++||+++... ... ..+.+|.++|.+++|+|++..++++|+.
T Consensus 95 ~~~~~~V~~v~~sp-~g~~l~sgs~dg~V~lwd~~~~~~-~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~ 172 (902)
T 2oaj_A 95 VFVPGKITSIDTDA-SLDWMLIGLQNGSMIVYDIDRDQL-SSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYE 172 (902)
T ss_dssp EECSSCEEEEECCT-TCSEEEEEETTSCEEEEETTTTEE-EEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECS
T ss_pred EcCCCCEEEEEECC-CCCEEEEEcCCCcEEEEECCCCcc-ccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeC
Confidence 34667899999999 689999999999999999984321 000 2346799999999999976446999999
Q ss_pred CCeEEEEeCCCCceeeeEeccC------------------CCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCC
Q psy4571 171 DKTVALWDLRNLKLKLHSFESH------------------KDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGE 228 (437)
Q Consensus 171 dg~i~lwd~~~~~~~~~~~~~h------------------~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~ 228 (437)
||.| +||+++++. ...+..| ...|++++|+|+|+ .|++|+.||.|++||+++++.
T Consensus 173 dg~v-lWd~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~-~lasgs~Dg~i~lWd~~~g~~ 245 (902)
T 2oaj_A 173 YVTL-TYSLVENEI-KQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSL-HIITIHEDNSLVFWDANSGHM 245 (902)
T ss_dssp SCEE-EEETTTTEE-EEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSS-EEEEEETTCCEEEEETTTCCE
T ss_pred CCcE-EEECCCCce-EEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCC-EEEEEECCCeEEEEECCCCcE
Confidence 9999 999998554 6666544 57799999999998 599999999999999977543
No 49
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=4.4e-33 Score=266.93 Aligned_cols=266 Identities=18% Similarity=0.299 Sum_probs=218.5
Q ss_pred ceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeCCCCCEEEEEECCCc
Q psy4571 48 DAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHLLHESLFGSVADDQK 127 (437)
Q Consensus 48 ~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~ 127 (437)
..+++++.|+.|++|+..++........ .+...|.+++|+| ++.+|++|+.||.
T Consensus 104 ~~l~~~~~d~~v~lw~~~~~~~~~~~~~-------------------------~~~~~v~~v~~s~-~~~~l~~~~~dg~ 157 (401)
T 4aez_A 104 LNVVAVALERNVYVWNADSGSVSALAET-------------------------DESTYVASVKWSH-DGSFLSVGLGNGL 157 (401)
T ss_dssp TSEEEEEETTEEEEEETTTCCEEEEEEC-------------------------CTTCCEEEEEECT-TSSEEEEEETTSC
T ss_pred CCEEEEECCCeEEEeeCCCCcEeEeeec-------------------------CCCCCEEEEEECC-CCCEEEEECCCCe
Confidence 4466666777777777665554433211 1356789999999 7889999999999
Q ss_pred EEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCc
Q psy4571 128 LMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNET 207 (437)
Q Consensus 128 v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~ 207 (437)
|++||+. ..+.+..+.+|...|.+++|+ +. +|++|+.||.|++||++........+.+|...|.+++|+|+++
T Consensus 158 i~iwd~~---~~~~~~~~~~~~~~v~~~~~~--~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~- 230 (401)
T 4aez_A 158 VDIYDVE---SQTKLRTMAGHQARVGCLSWN--RH-VLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGL- 230 (401)
T ss_dssp EEEEETT---TCCEEEEECCCSSCEEEEEEE--TT-EEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSS-
T ss_pred EEEEECc---CCeEEEEecCCCCceEEEEEC--CC-EEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCC-
Confidence 9999998 567788888999999999995 44 5999999999999999965666888889999999999999998
Q ss_pred EEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEe--CCCeEEEEeCCCCCC
Q psy4571 208 ILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVS--EDNIMQEYCDSTDSD 285 (437)
Q Consensus 208 ~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~--~dg~i~iwd~~~~~~ 285 (437)
.|++|+.|+.|++||+++. ..+..+.+|...|.+++|+|++..++++++ .|+.|++||+++++.
T Consensus 231 ~l~s~~~d~~v~iwd~~~~--------------~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~ 296 (401)
T 4aez_A 231 QLASGGNDNVVQIWDARSS--------------IPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGAR 296 (401)
T ss_dssp EEEEEETTSCEEEEETTCS--------------SEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCE
T ss_pred EEEEEeCCCeEEEccCCCC--------------CccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCE
Confidence 5999999999999999875 334557789999999999999887888876 799999999999987
Q ss_pred ceeeeeeecccCCceeeeecCCCCcccc--cCCCCcccccccccccccccccchhhhhhh--hhcCCCccccccCCCCCC
Q psy4571 286 TKTMRLDSIRSNGGISSTASPTASSTAS--ESPTPTNSVHEKNYWQGLVLFDILVCEEQR--QLLGTEEESSDRHSSDND 361 (437)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~s~~g~~l~s--~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~--~~~~h~~~~~~~~~~~~~ 361 (437)
...+. +...+..++|+|++..+++ |+.++. +++||+.+++... .+.+|...+..+.++|+|
T Consensus 297 ~~~~~----~~~~v~~~~~s~~~~~l~~~~g~~dg~-----------i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg 361 (401)
T 4aez_A 297 VNTVD----AGSQVTSLIWSPHSKEIMSTHGFPDNN-----------LSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDG 361 (401)
T ss_dssp EEEEE----CSSCEEEEEECSSSSEEEEEECTTTCE-----------EEEEEEETTEEEEEEEEECCSSCCCEEEECTTS
T ss_pred EEEEe----CCCcEEEEEECCCCCeEEEEeecCCCc-----------EEEEecCCccceeEEEecCCCCCEEEEEECCCC
Confidence 77664 3456778899999999998 668888 8999998865544 467999999999999999
Q ss_pred cccccc-------ccccCHHH
Q psy4571 362 TEDLNS-------IWSMTDEQ 375 (437)
Q Consensus 362 ~~~~~~-------~w~~~~~~ 375 (437)
..+++. +|++...+
T Consensus 362 ~~l~s~~~dg~i~iw~~~~~~ 382 (401)
T 4aez_A 362 RILSTAASDENLKFWRVYDGD 382 (401)
T ss_dssp SEEEEECTTSEEEEEECCC--
T ss_pred CEEEEEeCCCcEEEEECCCCc
Confidence 877764 89985443
No 50
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=8.9e-34 Score=262.79 Aligned_cols=254 Identities=19% Similarity=0.203 Sum_probs=197.3
Q ss_pred ccccceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEE
Q psy4571 31 SHSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVA 110 (437)
Q Consensus 31 ~~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~ 110 (437)
.-+...|.+++|+ |++++|++|+.|++|++|+..++....+. ....|...|.+++
T Consensus 10 ~~H~~~V~~v~~s-~~g~~lasgs~D~~v~lwd~~~~~~~~~~------------------------~l~gH~~~V~~v~ 64 (316)
T 3bg1_A 10 TSHEDMIHDAQMD-YYGTRLATCSSDRSVKIFDVRNGGQILIA------------------------DLRGHEGPVWQVA 64 (316)
T ss_dssp ----CCEEEEEEC-GGGCEEEEEETTTEEEEEEEETTEEEEEE------------------------EEECCSSCEEEEE
T ss_pred ccccCeEEEeeEc-CCCCEEEEEeCCCeEEEEEecCCCcEEEE------------------------EEcCCCccEEEEE
Confidence 3455679999999 99999999999999999997654321100 0012556889999
Q ss_pred eeCC-CCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCC--CCcEEEEEeCCCeEEEEeCCCCce--e
Q psy4571 111 WHLL-HESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPY--SEYILATGSADKTVALWDLRNLKL--K 185 (437)
Q Consensus 111 ~sp~-~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~--~~~~l~sgs~dg~i~lwd~~~~~~--~ 185 (437)
|+|. ++.+|++|+.|++|++||++++. ......+.+|...|.+++|+|+ +. +|++|+.|++|++||++.... .
T Consensus 65 ~~~~~~~~~l~s~s~D~~v~iWd~~~~~-~~~~~~~~~h~~~V~~v~~~p~~~g~-~lasgs~D~~i~lwd~~~~~~~~~ 142 (316)
T 3bg1_A 65 WAHPMYGNILASCSYDRKVIIWREENGT-WEKSHEHAGHDSSVNSVCWAPHDYGL-ILACGSSDGAISLLTYTGEGQWEV 142 (316)
T ss_dssp ECCGGGSSCEEEEETTSCEEEECCSSSC-CCEEEEECCCSSCCCEEEECCTTTCS-CEEEECSSSCEEEEEECSSSCEEE
T ss_pred eCCCCCCCEEEEEECCCEEEEEECCCCc-ceEEEEccCCCCceEEEEECCCCCCc-EEEEEcCCCCEEEEecCCCCCcce
Confidence 9863 47899999999999999998432 2456677899999999999998 66 499999999999999987532 1
Q ss_pred eeEeccCCCceEEEEEcCCC-----------------CcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecC
Q psy4571 186 LHSFESHKDEIFQVQWSPHN-----------------ETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGG 248 (437)
Q Consensus 186 ~~~~~~h~~~v~~v~~~p~~-----------------~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (437)
...+.+|...|.+++|+|+. + .|++|+.|+.|++||++.... ...+..+.+
T Consensus 143 ~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~sgs~D~~v~lWd~~~~~~-----------~~~~~~l~~ 210 (316)
T 3bg1_A 143 KKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIK-RFASGGCDNLIKLWKEEEDGQ-----------WKEEQKLEA 210 (316)
T ss_dssp CCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCC-BEECCBTTSBCCEEEECTTSC-----------EEEEECCBC
T ss_pred eeeeccccCCcceEEEccccCCccccccccccCccccc-eEEEecCCCeEEEEEeCCCCc-----------cceeeeccc
Confidence 34567899999999999973 4 589999999999999965321 123456789
Q ss_pred ccccEEEEEEccCC---CeEEEEEeCCCeEEEEeCCCCCC----ceeeeeeecccCCceeeeecCCCCcccccCCCCccc
Q psy4571 249 HTAKISDFSWNPNE---PWVICSVSEDNIMQEYCDSTDSD----TKTMRLDSIRSNGGISSTASPTASSTASESPTPTNS 321 (437)
Q Consensus 249 h~~~v~~l~~~p~~---~~~l~s~~~dg~i~iwd~~~~~~----~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~ 321 (437)
|...|.+++|+|++ ..+|++++.|++|++||+++... ...+ ..+...+..++|+|+|.+|++++.|++
T Consensus 211 h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~---~~~~~~v~~v~~sp~g~~las~~~D~~-- 285 (316)
T 3bg1_A 211 HSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLL---HKFNDVVWHVSWSITANILAVSGGDNK-- 285 (316)
T ss_dssp CSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEE---EECSSCEEEEEECTTTCCEEEEESSSC--
T ss_pred CCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhh---hcCCCcEEEEEEcCCCCEEEEEcCCCe--
Confidence 99999999999987 23899999999999999986321 1222 224566778899999999999999999
Q ss_pred ccccccccccccccch
Q psy4571 322 VHEKNYWQGLVLFDIL 337 (437)
Q Consensus 322 ~~~~~~~~~i~~wd~~ 337 (437)
+++|+..
T Consensus 286 ---------v~lw~~~ 292 (316)
T 3bg1_A 286 ---------VTLWKES 292 (316)
T ss_dssp ---------EEEEEEC
T ss_pred ---------EEEEEEC
Confidence 6777764
No 51
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=1.5e-32 Score=259.75 Aligned_cols=281 Identities=14% Similarity=0.080 Sum_probs=222.6
Q ss_pred ccccceeEEEEeeCCCcceEEEeeccCceEeeecCC-------------CceeEEEecCCCCeE-EEecCceEEEEEeee
Q psy4571 31 SHSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNT-------------PFLYDLVVNNYVANI-SCILNISILFFEIIF 96 (437)
Q Consensus 31 ~~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~-------------~~~~~~~~~~~~~~i-~~~~~~~i~~~~~~~ 96 (437)
.++...|.+++|+ |+++++++|+.|+.|++|+..+ +.+..+.+++....+ ++..|+.|++||+..
T Consensus 5 ~~~~~~i~~~~~s-~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~ 83 (372)
T 1k8k_C 5 SFLVEPISCHAWN-KDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKG 83 (372)
T ss_dssp ESCSSCCCEEEEC-TTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEET
T ss_pred cccCCCeEEEEEC-CCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCC
Confidence 3456679999999 9999999999999999999543 446677777777666 667889999999865
Q ss_pred cc---c---cccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCee-eeccCCCCeEEEEEeCCCCcEEEEEe
Q psy4571 97 TQ---N---FPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSH-TVDAHTAEVNCLSFNPYSEYILATGS 169 (437)
Q Consensus 97 ~~---~---~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~-~~~~h~~~v~~l~~~~~~~~~l~sgs 169 (437)
.+ . ..+...+.+++|+| ++.+|++|+.||.|++||+.......... ...+|...|.+++|+|++.. |++|+
T Consensus 84 ~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-l~~~~ 161 (372)
T 1k8k_C 84 RTWKPTLVILRINRAARCVRWAP-NEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVL-LAAGS 161 (372)
T ss_dssp TEEEEEEECCCCSSCEEEEEECT-TSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSE-EEEEE
T ss_pred CeeeeeEEeecCCCceeEEEECC-CCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCE-EEEEc
Confidence 53 1 34677899999999 68899999999999999998542211223 33678999999999999985 99999
Q ss_pred CCCeEEEEeCCC-----------------CceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCC
Q psy4571 170 ADKTVALWDLRN-----------------LKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQST 232 (437)
Q Consensus 170 ~dg~i~lwd~~~-----------------~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~ 232 (437)
.||.|++||++. ...++..+..|...|.+++|+|+++ .|++++.|+.|++||+++++
T Consensus 162 ~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~----- 235 (372)
T 1k8k_C 162 CDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGS-RVAWVSHDSTVCLADADKKM----- 235 (372)
T ss_dssp TTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSS-EEEEEETTTEEEEEEGGGTT-----
T ss_pred CCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCC-EEEEEeCCCEEEEEECCCCc-----
Confidence 999999999641 1334777888999999999999998 58999999999999998753
Q ss_pred CCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCC--CCC--cee--------------------
Q psy4571 233 EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDST--DSD--TKT-------------------- 288 (437)
Q Consensus 233 ~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~--~~~--~~~-------------------- 288 (437)
.+..+..|...|.+++|+|++. ++++| .|+.|++|++++ ++. ...
T Consensus 236 ---------~~~~~~~~~~~v~~~~~~~~~~-~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (372)
T 1k8k_C 236 ---------AVATLASETLPLLAVTFITESS-LVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQN 304 (372)
T ss_dssp ---------EEEEEECSSCCEEEEEEEETTE-EEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHH
T ss_pred ---------eeEEEccCCCCeEEEEEecCCC-EEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhh
Confidence 3555778999999999999998 67666 999999999987 310 000
Q ss_pred --------------eeeeecccCCceeeeec-CCC---CcccccCCCCcccccccccccccccccchhhhhh
Q psy4571 289 --------------MRLDSIRSNGGISSTAS-PTA---SSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQ 342 (437)
Q Consensus 289 --------------~~~~~~~~~~~~~~~~s-~~g---~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~ 342 (437)
......|...+..++|. ++| .++++++.|+. |++||+.+++..
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~-----------i~~W~~~~~~~~ 365 (372)
T 1k8k_C 305 LDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGG-----------MSIWDVRSLESA 365 (372)
T ss_dssp CCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSE-----------EEEEEHHHHHHH
T ss_pred cccccccccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCc-----------eEEEEecChhHh
Confidence 11112355566667754 777 99999999999 899999988754
No 52
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=9.8e-33 Score=259.37 Aligned_cols=281 Identities=10% Similarity=0.113 Sum_probs=216.2
Q ss_pred ccceeEEEEeeCCCc-ceEEEeec---cCceEeeecCC------------CceeEEEecCC---CCe-EEEecCceEEEE
Q psy4571 33 SIYRFYRLCVAEPFD-DAVEERVI---NEEYKIWKKNT------------PFLYDLVVNNY---VAN-ISCILNISILFF 92 (437)
Q Consensus 33 ~~~~v~~~~~~~~~~-~~l~tgs~---d~~v~iw~~~~------------~~~~~~~~~~~---~~~-i~~~~~~~i~~~ 92 (437)
+...|.+++|+ |++ .++++|+. |+.+++|+..+ ..+..+.|.+. ... +++..++.|++|
T Consensus 17 h~~~v~~~~~~-p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw 95 (357)
T 3i2n_A 17 FNYTVFDCKWV-PCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIW 95 (357)
T ss_dssp CSSCEEEEEEC-TTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEE
T ss_pred CCCceEEEEEc-CCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEEEE
Confidence 66789999999 877 45667776 99999999543 34666777776 244 467789999999
Q ss_pred Eeeecc-c----cccCCCcceEEe------eCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCC----CeEEEE-
Q psy4571 93 EIIFTQ-N----FPFPLSRQDVAW------HLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTA----EVNCLS- 156 (437)
Q Consensus 93 ~~~~~~-~----~~~~~~v~~~~~------sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~----~v~~l~- 156 (437)
|+...+ . ..+...|.+++| +| ++.+|++|+.||.|++||+.... ..+..+..|.+ .+.+++
T Consensus 96 d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~-~~~~l~~~~~d~~i~vwd~~~~~--~~~~~~~~~~~~~~~~v~~~~~ 172 (357)
T 3i2n_A 96 NLEAPEMPVYSVKGHKEIINAIDGIGGLGIGE-GAPEIVTGSRDGTVKVWDPRQKD--DPVANMEPVQGENKRDCWTVAF 172 (357)
T ss_dssp CTTSCSSCSEEECCCSSCEEEEEEESGGGCC--CCCEEEEEETTSCEEEECTTSCS--SCSEEECCCTTSCCCCEEEEEE
T ss_pred eCCCCCccEEEEEecccceEEEeeccccccCC-CccEEEEEeCCCeEEEEeCCCCC--CcceeccccCCCCCCceEEEEE
Confidence 987554 2 235678999965 56 67899999999999999998532 25566655554 899998
Q ss_pred ---EeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcC---CCCcEEEEEeCCCeEEEEEcCCCCCCC
Q psy4571 157 ---FNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSP---HNETILASSGTDRRLHVWDLSKIGEEQ 230 (437)
Q Consensus 157 ---~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p---~~~~~l~sg~~dg~i~vwd~~~~~~~~ 230 (437)
|+|++. +|++++.||.|++||+++++. .....|...|.+++|+| ++. .+++|+.||.|++||+++.....
T Consensus 173 ~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~ 248 (357)
T 3i2n_A 173 GNAYNQEER-VVCAGYDNGDIKLFDLRNMAL--RWETNIKNGVCSLEFDRKDISMN-KLVATSLEGKFHVFDMRTQHPTK 248 (357)
T ss_dssp ECCCC-CCC-EEEEEETTSEEEEEETTTTEE--EEEEECSSCEEEEEESCSSSSCC-EEEEEESTTEEEEEEEEEEETTT
T ss_pred EeccCCCCC-EEEEEccCCeEEEEECccCce--eeecCCCCceEEEEcCCCCCCCC-EEEEECCCCeEEEEeCcCCCccc
Confidence 678888 499999999999999998654 34467899999999999 787 58999999999999998865443
Q ss_pred CCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCc----------------eeeeeeec
Q psy4571 231 STEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDT----------------KTMRLDSI 294 (437)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~----------------~~~~~~~~ 294 (437)
. .......+|...|++++|+|+++.++++++.||.|++||++.+... ..+.....
T Consensus 249 ~---------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 319 (357)
T 3i2n_A 249 G---------FASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTL 319 (357)
T ss_dssp E---------EEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEEC
T ss_pred c---------eeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeecccc
Confidence 3 1122345899999999999999878999999999999999876543 22333334
Q ss_pred ccCCceeeeecCCCCccc-ccCCCCcccccccccccccccccchhhhh
Q psy4571 295 RSNGGISSTASPTASSTA-SESPTPTNSVHEKNYWQGLVLFDILVCEE 341 (437)
Q Consensus 295 ~~~~~~~~~~s~~g~~l~-s~s~d~~~~~~~~~~~~~i~~wd~~~~~~ 341 (437)
+...+..++|+|+|.+++ +++.|+. +++||+.+.+.
T Consensus 320 ~~~~v~~~~~s~~~~~l~~s~~~d~~-----------i~iw~~~~~~~ 356 (357)
T 3i2n_A 320 STQPISSLDWSPDKRGLCVCSSFDQT-----------VRVLIVTKLNK 356 (357)
T ss_dssp CSSCEEEEEECSSSTTEEEEEETTSE-----------EEEEEECC---
T ss_pred CCCCeeEEEEcCCCCeEEEEecCCCc-----------EEEEECCCccc
Confidence 566677889999999998 7999998 89999876653
No 53
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=1.1e-32 Score=259.51 Aligned_cols=242 Identities=16% Similarity=0.224 Sum_probs=194.0
Q ss_pred cceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeC
Q psy4571 34 IYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHL 113 (437)
Q Consensus 34 ~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp 113 (437)
...|.+++|+ |++..+++|+.|+.+++|+........ ..... .....+...|.+++|+|
T Consensus 106 ~~~v~~~~~s-p~g~~lasg~~d~~i~v~~~~~~~~~~-----~~~~~---------------~~~~~h~~~v~~~~~~~ 164 (354)
T 2pbi_B 106 CTWVMACAYA-PSGCAIACGGLDNKCSVYPLTFDKNEN-----MAAKK---------------KSVAMHTNYLSACSFTN 164 (354)
T ss_dssp SSCCCEEEEC-TTSSEEEEESTTSEEEEEECCCCTTCC-----SGGGC---------------EEEEECSSCEEEEEECS
T ss_pred CCCEEEEEEC-CCCCEEEEeeCCCCEEEEEEecccccc-----ccccc---------------eeeeccCCcEEEEEEeC
Confidence 3457788888 888899999999999988864321100 00000 00112556789999999
Q ss_pred CCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCC--CCcEEEEEeCCCeEEEEeCCCCceeeeEecc
Q psy4571 114 LHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPY--SEYILATGSADKTVALWDLRNLKLKLHSFES 191 (437)
Q Consensus 114 ~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~--~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~ 191 (437)
++..|++|+.||+|++||++ ..+.+..+.+|...|.+++|+|+ +. +|++|+.||+|++||+++++. +..+..
T Consensus 165 -~~~~l~t~s~D~~v~lwd~~---~~~~~~~~~~h~~~v~~~~~~~~~~g~-~l~sgs~Dg~v~~wd~~~~~~-~~~~~~ 238 (354)
T 2pbi_B 165 -SDMQILTASGDGTCALWDVE---SGQLLQSFHGHGADVLCLDLAPSETGN-TFVSGGCDKKAMVWDMRSGQC-VQAFET 238 (354)
T ss_dssp -SSSEEEEEETTSEEEEEETT---TCCEEEEEECCSSCEEEEEECCCSSCC-EEEEEETTSCEEEEETTTCCE-EEEECC
T ss_pred -CCCEEEEEeCCCcEEEEeCC---CCeEEEEEcCCCCCeEEEEEEeCCCCC-EEEEEeCCCeEEEEECCCCcE-EEEecC
Confidence 67899999999999999998 56778889999999999999884 55 599999999999999999665 788899
Q ss_pred CCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeC
Q psy4571 192 HKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSE 271 (437)
Q Consensus 192 h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~ 271 (437)
|...|++++|+|+++ .|++|+.|++|++||++...... ......+...+.+++|+|+++ ++++|+.
T Consensus 239 h~~~v~~v~~~p~~~-~l~s~s~D~~v~lwd~~~~~~~~------------~~~~~~~~~~~~~~~~s~~g~-~l~~g~~ 304 (354)
T 2pbi_B 239 HESDVNSVRYYPSGD-AFASGSDDATCRLYDLRADREVA------------IYSKESIIFGASSVDFSLSGR-LLFAGYN 304 (354)
T ss_dssp CSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTTEEEE------------EECCTTCCSCEEEEEECTTSS-EEEEEET
T ss_pred CCCCeEEEEEeCCCC-EEEEEeCCCeEEEEECCCCcEEE------------EEcCCCcccceeEEEEeCCCC-EEEEEEC
Confidence 999999999999998 59999999999999998753211 111223345789999999999 8889999
Q ss_pred CCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCc
Q psy4571 272 DNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPT 319 (437)
Q Consensus 272 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~ 319 (437)
|+.|++||+.+++.+..+.. |...+..++|+|+|++|++|+.|++
T Consensus 305 d~~i~vwd~~~~~~~~~l~~---h~~~v~~l~~spdg~~l~sgs~D~~ 349 (354)
T 2pbi_B 305 DYTINVWDVLKGSRVSILFG---HENRVSTLRVSPDGTAFCSGSWDHT 349 (354)
T ss_dssp TSCEEEEETTTCSEEEEECC---CSSCEEEEEECTTSSCEEEEETTSE
T ss_pred CCcEEEEECCCCceEEEEEC---CCCcEEEEEECCCCCEEEEEcCCCC
Confidence 99999999998876655543 5667788899999999999999999
No 54
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=3.8e-32 Score=260.02 Aligned_cols=289 Identities=15% Similarity=0.116 Sum_probs=220.4
Q ss_pred ccccceeEEEEeeCC-CcceEEEeeccCceEeeec------------------------CCCceeEEEecC-CCCeE-EE
Q psy4571 31 SHSIYRFYRLCVAEP-FDDAVEERVINEEYKIWKK------------------------NTPFLYDLVVNN-YVANI-SC 83 (437)
Q Consensus 31 ~~~~~~v~~~~~~~~-~~~~l~tgs~d~~v~iw~~------------------------~~~~~~~~~~~~-~~~~i-~~ 83 (437)
..+.-.|.+++|+ | ++++|++|+.|+.|++|+. +.+.+..+.|.+ ....+ ++
T Consensus 40 ~~h~~~v~~~~~s-~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~ 118 (408)
T 4a11_B 40 RIHGGGINTLDIE-PVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSS 118 (408)
T ss_dssp CCCSSCEEEEEEC-TTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEE
T ss_pred eccCCcEEEEEEe-cCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEE
Confidence 3467789999999 8 9999999999999999994 456688888887 44344 67
Q ss_pred ecCceEEEEEeeecc---ccccCCCcceEEeeCCC--CCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEe
Q psy4571 84 ILNISILFFEIIFTQ---NFPFPLSRQDVAWHLLH--ESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFN 158 (437)
Q Consensus 84 ~~~~~i~~~~~~~~~---~~~~~~~v~~~~~sp~~--~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~ 158 (437)
..++.|++||+...+ .+.+...+.+++|+|.+ +.++++|+.||.|++||+. ....+..+.+|...|.+++|+
T Consensus 119 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~---~~~~~~~~~~~~~~v~~~~~~ 195 (408)
T 4a11_B 119 SFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLK---SGSCSHILQGHRQEILAVSWS 195 (408)
T ss_dssp ETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESS---SSCCCEEECCCCSCEEEEEEC
T ss_pred eCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCC---CcceeeeecCCCCcEEEEEEC
Confidence 779999999976544 34567889999999853 3499999999999999998 556778888999999999999
Q ss_pred CCCCcEEEEEeCCCeEEEEeCCCCceeeeEe---------------ccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEc
Q psy4571 159 PYSEYILATGSADKTVALWDLRNLKLKLHSF---------------ESHKDEIFQVQWSPHNETILASSGTDRRLHVWDL 223 (437)
Q Consensus 159 ~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~---------------~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~ 223 (437)
|++.++|++|+.||.|++||+++...+...+ ..|...|.+++|+|+++ .|++++.||.|++||+
T Consensus 196 ~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~vwd~ 274 (408)
T 4a11_B 196 PRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGL-HLLTVGTDNRMRLWNS 274 (408)
T ss_dssp SSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSS-EEEEEETTSCEEEEET
T ss_pred CCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCC-EEEEecCCCeEEEEEC
Confidence 9999779999999999999998866445444 57889999999999998 5899999999999999
Q ss_pred CCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeee
Q psy4571 224 SKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISST 303 (437)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 303 (437)
+++.......... .......+........+. .+++++.|+.|++||+.+++.+..+.. +...+..++
T Consensus 275 ~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~v~d~~~~~~~~~~~~---~~~~v~~~~ 341 (408)
T 4a11_B 275 SNGENTLVNYGKV---------CNNSKKGLKFTVSCGCSS-EFVFVPYGSTIAVYTVYSGEQITMLKG---HYKTVDCCV 341 (408)
T ss_dssp TTCCBCCCCCCCC---------CCCCSSCCCCEECCSSSS-CEEEEEETTEEEEEETTTCCEEEEECC---CSSCEEEEE
T ss_pred CCCccceeccccc---------cccccccceeEEecCCCc-eEEEEecCCEEEEEECcCCcceeeecc---CCCeEEEEE
Confidence 9876543321100 001111111111222233 466778899999999999988776653 456777889
Q ss_pred ecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCC
Q psy4571 304 ASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGT 348 (437)
Q Consensus 304 ~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h 348 (437)
|+|++.+|++++.|+. +++||+.+++.+.....+
T Consensus 342 ~s~~~~~l~s~~~dg~-----------i~iw~~~~~~~~~~~~~~ 375 (408)
T 4a11_B 342 FQSNFQELYSGSRDCN-----------ILAWVPSLYEPVPDDDET 375 (408)
T ss_dssp EETTTTEEEEEETTSC-----------EEEEEECC----------
T ss_pred EcCCCCEEEEECCCCe-----------EEEEeCCCCCccCCCCce
Confidence 9999999999999998 899999998877655433
No 55
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=2.8e-32 Score=263.01 Aligned_cols=238 Identities=19% Similarity=0.295 Sum_probs=205.4
Q ss_pred cCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCC
Q psy4571 102 FPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRN 181 (437)
Q Consensus 102 ~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~ 181 (437)
+...|++|+|+| ++.+|++|+.||.|++||++ ..+.+..+.+|...+.+++++ +. +|++|+.|+.+++||.+.
T Consensus 146 ~~~~V~sv~fsp-dg~~lasgs~Dg~v~iWd~~---~~~~~~~~~~h~~~v~~~s~~--~~-~l~sgs~d~~i~~~d~~~ 218 (420)
T 4gga_A 146 PGEYISSVAWIK-EGNYLAVGTSSAEVQLWDVQ---QQKRLRNMTSHSARVGSLSWN--SY-ILSSGSRSGHIHHHDVRV 218 (420)
T ss_dssp TTCCEEEEEECT-TSSEEEEEETTSCEEEEETT---TTEEEEEECCCSSCEEEEEEE--TT-EEEEEETTSEEEEEETTS
T ss_pred CCCcEEEEEECC-CCCEEEEEECCCeEEEEEcC---CCcEEEEEeCCCCceEEEeeC--CC-EEEEEeCCCceeEeeecc
Confidence 345789999999 68999999999999999998 567888999999999999886 44 699999999999999998
Q ss_pred CceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccC
Q psy4571 182 LKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPN 261 (437)
Q Consensus 182 ~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~ 261 (437)
....+..+.+|...+..+.++|+++ .+++++.|+.+++|+...+.... ..+.....|...|.+++|+|.
T Consensus 219 ~~~~~~~~~~h~~~~~~~~~~~~g~-~l~s~~~D~~v~i~~~~~~~~~~----------~~~~~~~~~~~~V~~~~~~p~ 287 (420)
T 4gga_A 219 AEHHVATLSGHSQEVCGLRWAPDGR-HLASGGNDNLVNVWPSAPGEGGW----------VPLQTFTQHQGAVKAVAWCPW 287 (420)
T ss_dssp SSCEEEEEECCSSCEEEEEECTTSS-EEEEEETTSCEEEEESSCCSSCS----------CCSEEECCCSSCEEEEEECTT
T ss_pred cceeeEEecccccceeeeeecCCCC-eeeeeeccccceEEeeccccccc----------eeeeeecccCCceeeeeeCCC
Confidence 7777788899999999999999998 59999999999999998765332 234557789999999999999
Q ss_pred CCeEEEEE--eCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccC--CCCcccccccccccccccccch
Q psy4571 262 EPWVICSV--SEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASES--PTPTNSVHEKNYWQGLVLFDIL 337 (437)
Q Consensus 262 ~~~~l~s~--~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s--~d~~~~~~~~~~~~~i~~wd~~ 337 (437)
+..+++++ +.|++|++||+.++++...+. .+..+..+.|+|++..+++++ .|+. |++||+.
T Consensus 288 ~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~----~~~~v~~~~~~~~~~~lv~~sg~~d~~-----------I~iwd~~ 352 (420)
T 4gga_A 288 QSNVLATGGGTSDRHIRIWNVCSGACLSAVD----AHSQVCSILWSPHYKELISGHGFAQNQ-----------LVIWKYP 352 (420)
T ss_dssp CTTEEEEEECTTTCEEEEEETTTTEEEEEEE----CSSCEEEEEEETTTTEEEEEECTTTCC-----------EEEEETT
T ss_pred cccEEEEEeecCCCEEEEEeCCccccceeec----cccceeeeeecCCCCeEEEEEecCCCE-----------EEEEECC
Confidence 88777764 479999999999998776665 345677889999999887654 6777 8999999
Q ss_pred hhhhhhhhcCCCccccccCCCCCCcccccc-------ccccC
Q psy4571 338 VCEEQRQLLGTEEESSDRHSSDNDTEDLNS-------IWSMT 372 (437)
Q Consensus 338 ~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~-------~w~~~ 372 (437)
+++.+..+.||.+.|.++.++|+|..++++ +|++.
T Consensus 353 ~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~ 394 (420)
T 4gga_A 353 TMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCF 394 (420)
T ss_dssp TCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCS
T ss_pred CCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECC
Confidence 999999999999999999999999988875 89873
No 56
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=6e-32 Score=263.91 Aligned_cols=281 Identities=15% Similarity=0.198 Sum_probs=230.7
Q ss_pred eEEEEeeCCCcceEEEeeccCceEeeec-----------CCCceeEEEecCCCCeEEEecCceEEEEEeeecccc----c
Q psy4571 37 FYRLCVAEPFDDAVEERVINEEYKIWKK-----------NTPFLYDLVVNNYVANISCILNISILFFEIIFTQNF----P 101 (437)
Q Consensus 37 v~~~~~~~~~~~~l~tgs~d~~v~iw~~-----------~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~----~ 101 (437)
+.++.|+ ++++++|+.|++|++|+. |.+.+..+.+.+....++++.|+.|++||+..++.. .
T Consensus 125 ~~~~~~~---~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~ 201 (464)
T 3v7d_B 125 ITCLQFE---DNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEG 201 (464)
T ss_dssp EEEEEEE---TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTTEEEEEETTSCEEEEETTTTEEEEEECC
T ss_pred EEEEEEC---CCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCCEEEEEeCCCCEEEEECCCCcEEEEECC
Confidence 4555654 679999999999999994 456678888877775668889999999997655432 3
Q ss_pred cCCCcceEEeeCC-CCCEEEEEECCCcEEEEEcCCCCCCC--------------------CeeeeccCCCCeEEEEEeCC
Q psy4571 102 FPLSRQDVAWHLL-HESLFGSVADDQKLMIWDTRSHNVSK--------------------PSHTVDAHTAEVNCLSFNPY 160 (437)
Q Consensus 102 ~~~~v~~~~~sp~-~~~~l~~~~~dg~v~vwd~~~~~~~~--------------------~~~~~~~h~~~v~~l~~~~~ 160 (437)
+...|.+++|+|. ++.++++|+.||.|++||+.+..... .+..+.+|...|.++ +++
T Consensus 202 h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~ 279 (464)
T 3v7d_B 202 HNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGH 279 (464)
T ss_dssp CSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEE
T ss_pred CCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCC
Confidence 6789999999952 56899999999999999998543211 155677899999887 566
Q ss_pred CCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCC
Q psy4571 161 SEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPP 240 (437)
Q Consensus 161 ~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~ 240 (437)
+. .+++|+.||.|++||+++++. +..+.+|...|.+++|+|+++ .+++|+.||.|++||++++
T Consensus 280 ~~-~l~~~~~d~~i~vwd~~~~~~-~~~~~~~~~~v~~~~~~~~~~-~l~sg~~dg~i~vwd~~~~-------------- 342 (464)
T 3v7d_B 280 GN-IVVSGSYDNTLIVWDVAQMKC-LYILSGHTDRIYSTIYDHERK-RCISASMDTTIRIWDLENG-------------- 342 (464)
T ss_dssp TT-EEEEEETTSCEEEEETTTTEE-EEEECCCSSCEEEEEEETTTT-EEEEEETTSCEEEEETTTT--------------
T ss_pred CC-EEEEEeCCCeEEEEECCCCcE-EEEecCCCCCEEEEEEcCCCC-EEEEEeCCCcEEEEECCCC--------------
Confidence 77 499999999999999998655 788889999999999999998 5899999999999999875
Q ss_pred ceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcc
Q psy4571 241 ELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTN 320 (437)
Q Consensus 241 ~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~ 320 (437)
+.+..+.+|...|.+++|++ + .+++++.||.|++||++++....... +......++++|++.++++|+ ++.
T Consensus 343 ~~~~~~~~h~~~v~~~~~~~--~-~l~s~s~dg~v~vwd~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~~-dg~- 413 (464)
T 3v7d_B 343 ELMYTLQGHTALVGLLRLSD--K-FLVSAAADGSIRGWDANDYSRKFSYH----HTNLSAITTFYVSDNILVSGS-ENQ- 413 (464)
T ss_dssp EEEEEECCCSSCEEEEEECS--S-EEEEEETTSEEEEEETTTCCEEEEEE----CTTCCCEEEEEECSSEEEEEE-TTE-
T ss_pred cEEEEEeCCCCcEEEEEEcC--C-EEEEEeCCCcEEEEECCCCceeeeec----CCCCccEEEEEeCCCEEEEec-CCe-
Confidence 44566889999999999974 4 78999999999999999876544332 344555668999999999998 676
Q ss_pred cccccccccccccccchhhhhhhh-hcCCCccccccCCC
Q psy4571 321 SVHEKNYWQGLVLFDILVCEEQRQ-LLGTEEESSDRHSS 358 (437)
Q Consensus 321 ~~~~~~~~~~i~~wd~~~~~~~~~-~~~h~~~~~~~~~~ 358 (437)
+++||+.+|+.++. +.+|...+..+.++
T Consensus 414 ----------i~iwd~~~g~~~~~~~~~~~~~v~~v~~~ 442 (464)
T 3v7d_B 414 ----------FNIYNLRSGKLVHANILKDADQIWSVNFK 442 (464)
T ss_dssp ----------EEEEETTTCCEEESCTTTTCSEEEEEEEE
T ss_pred ----------EEEEECCCCcEEehhhccCCCcEEEEEec
Confidence 89999999998876 68888888888886
No 57
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1.5e-32 Score=252.29 Aligned_cols=245 Identities=19% Similarity=0.234 Sum_probs=195.6
Q ss_pred ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCC--CCcEEEEEeCCCeEEEEe
Q psy4571 101 PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPY--SEYILATGSADKTVALWD 178 (437)
Q Consensus 101 ~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~--~~~~l~sgs~dg~i~lwd 178 (437)
.+...|.+++|+| ++.+|++|+.|++|++||+... ..+.+..+.+|.++|.+++|+|+ +. +|++|+.|++|++||
T Consensus 7 ~h~~~V~~~~~s~-~g~~las~s~D~~v~iw~~~~~-~~~~~~~l~gH~~~V~~v~~s~~~~g~-~l~s~s~D~~v~iWd 83 (297)
T 2pm7_B 7 AHNEMIHDAVMDY-YGKRMATCSSDKTIKIFEVEGE-THKLIDTLTGHEGPVWRVDWAHPKFGT-ILASCSYDGKVMIWK 83 (297)
T ss_dssp SCSSCEEEEEECT-TSSEEEEEETTSCEEEEEBCSS-CBCCCEEECCCSSCEEEEEECCGGGCS-EEEEEETTTEEEEEE
T ss_pred CCcCceEEEEECC-CCCEEEEEeCCCEEEEEecCCC-CcEEEEEEccccCCeEEEEecCCCcCC-EEEEEcCCCEEEEEE
Confidence 3567899999999 6889999999999999999743 23567889999999999999864 66 599999999999999
Q ss_pred CCCCc-eeeeEeccCCCceEEEEEcCC--CCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEE
Q psy4571 179 LRNLK-LKLHSFESHKDEIFQVQWSPH--NETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISD 255 (437)
Q Consensus 179 ~~~~~-~~~~~~~~h~~~v~~v~~~p~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 255 (437)
+++++ ..+..+..|...|.+++|+|+ +. +|++|+.|+.|++||++...... ...+.+|...|.+
T Consensus 84 ~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~-~l~s~s~d~~v~~wd~~~~~~~~------------~~~~~~h~~~v~~ 150 (297)
T 2pm7_B 84 EENGRWSQIAVHAVHSASVNSVQWAPHEYGP-MLLVASSDGKVSVVEFKENGTTS------------PIIIDAHAIGVNS 150 (297)
T ss_dssp BSSSCBCCCEEECCCSSCEEEEEECCGGGCS-EEEEEETTSEEEEEEBCSSSCBC------------CEEEECCSSCEEE
T ss_pred cCCCceEEEEEeecCCCceeEEEeCcCCCCc-EEEEEECCCcEEEEEecCCCcee------------eeeeecccCccce
Confidence 98754 235667789999999999997 66 69999999999999998753211 2346789999999
Q ss_pred EEEccCC------------CeEEEEEeCCCeEEEEeCCCCCCceee-eeeecccCCceeeeecCCC---CcccccCCCCc
Q psy4571 256 FSWNPNE------------PWVICSVSEDNIMQEYCDSTDSDTKTM-RLDSIRSNGGISSTASPTA---SSTASESPTPT 319 (437)
Q Consensus 256 l~~~p~~------------~~~l~s~~~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~s~~g---~~l~s~s~d~~ 319 (437)
++|+|++ ..+|++|+.|+.|++||+++++..... .....|...+..++|+|++ .++++++.|++
T Consensus 151 ~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~ 230 (297)
T 2pm7_B 151 ASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRT 230 (297)
T ss_dssp EEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSC
T ss_pred EeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCc
Confidence 9999973 237999999999999999887632221 1222355667888999995 89999999999
Q ss_pred ccccccccccccccccchhhhh---hhhh--cCCCccccccCCCCCCcccccc-------ccccC
Q psy4571 320 NSVHEKNYWQGLVLFDILVCEE---QRQL--LGTEEESSDRHSSDNDTEDLNS-------IWSMT 372 (437)
Q Consensus 320 ~~~~~~~~~~~i~~wd~~~~~~---~~~~--~~h~~~~~~~~~~~~~~~~~~~-------~w~~~ 372 (437)
+++||+.++.. ...+ .+|...+..+.++|+|..+++. +|+..
T Consensus 231 -----------v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 231 -----------CIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (297)
T ss_dssp -----------EEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEEC
T ss_pred -----------EEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEEC
Confidence 78888876431 1122 5788889999999999887764 77763
No 58
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=6.2e-33 Score=263.28 Aligned_cols=232 Identities=12% Similarity=0.123 Sum_probs=181.7
Q ss_pred ccceeEEEEeeCCCcceEEEeeccCceEeeecC-------------CCceeEEEecCCCCeE-EEecCceEEEEEeeecc
Q psy4571 33 SIYRFYRLCVAEPFDDAVEERVINEEYKIWKKN-------------TPFLYDLVVNNYVANI-SCILNISILFFEIIFTQ 98 (437)
Q Consensus 33 ~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~-------------~~~~~~~~~~~~~~~i-~~~~~~~i~~~~~~~~~ 98 (437)
....|.+++|+ |++++|++|+.|+.|++|+.. .+.+..+.|++....+ +++.|+.|++||+....
T Consensus 10 ~~~~v~~~~~s-~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~ 88 (377)
T 3dwl_C 10 LPKPSYEHAFN-SQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDG 88 (377)
T ss_dssp CSSCCSCCEEC-SSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------
T ss_pred CCCcEEEEEEC-CCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCC
Confidence 34578899999 999999999999999999943 3457888888887666 67789999999987654
Q ss_pred -------ccccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeecc-CCCCeEEEEEeCCCCcEEEEEeC
Q psy4571 99 -------NFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDA-HTAEVNCLSFNPYSEYILATGSA 170 (437)
Q Consensus 99 -------~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~-h~~~v~~l~~~~~~~~~l~sgs~ 170 (437)
...+...|.+++|+| ++.+|++|+.||.|++||++..........+.+ |...|.+++|+|++.. |++|+.
T Consensus 89 ~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~-l~~~~~ 166 (377)
T 3dwl_C 89 TWKQTLVLLRLNRAATFVRWSP-NEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVL-LAAGCA 166 (377)
T ss_dssp CCCCEEECCCCSSCEEEEECCT-TSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSE-EEEEES
T ss_pred ceeeeeEecccCCceEEEEECC-CCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCE-EEEEeC
Confidence 224677999999999 688999999999999999986543335677777 9999999999999984 999999
Q ss_pred CCeEEEEeCCCC-----------------ceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCC
Q psy4571 171 DKTVALWDLRNL-----------------KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTE 233 (437)
Q Consensus 171 dg~i~lwd~~~~-----------------~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~ 233 (437)
|+.|++||++.. ..++..+ .|...|.+++|+|+++. |++|+.||.|++||++++....
T Consensus 167 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~-l~~~~~d~~i~iwd~~~~~~~~--- 241 (377)
T 3dwl_C 167 DRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNA-LAYAGHDSSVTIAYPSAPEQPP--- 241 (377)
T ss_dssp SSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSC-EEEEETTTEEC-CEECSTTSCE---
T ss_pred CCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCE-EEEEeCCCcEEEEECCCCCCcc---
Confidence 999999998631 2234455 89999999999999985 8999999999999999875411
Q ss_pred CCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCC
Q psy4571 234 DAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDS 281 (437)
Q Consensus 234 ~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~ 281 (437)
..+..+.+|...|.+++|+|+++ ++++++.|+.+ +|+..
T Consensus 242 -------~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 242 -------RALITVKLSQLPLRSLLWANESA-IVAAGYNYSPI-LLQGN 280 (377)
T ss_dssp -------EECCCEECSSSCEEEEEEEETTE-EEEEESSSSEE-EECCC
T ss_pred -------eeeEeecCCCCceEEEEEcCCCC-EEEEEcCCcEE-EEEeC
Confidence 11344778999999999999998 78788766666 66655
No 59
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.4e-32 Score=259.71 Aligned_cols=265 Identities=15% Similarity=0.176 Sum_probs=221.8
Q ss_pred cceeEEEEeeCCCcceEEEeeccCceEeeec----------CCCceeEEEecCCCCeE-EEecCceEEEEEeeeccccc-
Q psy4571 34 IYRFYRLCVAEPFDDAVEERVINEEYKIWKK----------NTPFLYDLVVNNYVANI-SCILNISILFFEIIFTQNFP- 101 (437)
Q Consensus 34 ~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~----------~~~~~~~~~~~~~~~~i-~~~~~~~i~~~~~~~~~~~~- 101 (437)
.-.|.+++|+ |++++|++|+.|+.|++|+. +.+.+..+.+.+....+ ++..++.|++||+...+...
T Consensus 108 ~~~v~~~~~s-~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~ 186 (425)
T 1r5m_A 108 TNQVTCLAWS-HDGNSIVTGVENGELRLWNKTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQH 186 (425)
T ss_dssp CBCEEEEEEC-TTSSEEEEEETTSCEEEEETTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEE
T ss_pred CCceEEEEEc-CCCCEEEEEeCCCeEEEEeCCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEE
Confidence 4489999999 99999999999999999993 45668888888887766 67789999999976443221
Q ss_pred --c-CCC---------------cceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCc
Q psy4571 102 --F-PLS---------------RQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEY 163 (437)
Q Consensus 102 --~-~~~---------------v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~ 163 (437)
. ... +.+++|+| + ..+++++.+|.|++||+. ..+.+..+..|...|.+++|+|++..
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~g~i~~~d~~---~~~~~~~~~~~~~~i~~~~~~~~~~~ 261 (425)
T 1r5m_A 187 FELKETGGSSINAENHSGDGSLGVDVEWVD-D-DKFVIPGPKGAIFVYQIT---EKTPTGKLIGHHGPISVLEFNDTNKL 261 (425)
T ss_dssp ECCC---------------CCCBSCCEEEE-T-TEEEEECGGGCEEEEETT---CSSCSEEECCCSSCEEEEEEETTTTE
T ss_pred eeccccCccceeeccccCCcceeeEEEEcC-C-CEEEEEcCCCeEEEEEcC---CCceeeeeccCCCceEEEEECCCCCE
Confidence 1 222 89999999 3 568899999999999998 45677788899999999999999994
Q ss_pred EEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceE
Q psy4571 164 ILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELL 243 (437)
Q Consensus 164 ~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~ 243 (437)
|++++.||.|++||+++.+. ...+..|...|.+++|+|++ .+++++.|+.|++||+++. +.+
T Consensus 262 -l~~~~~d~~i~i~d~~~~~~-~~~~~~~~~~i~~~~~~~~~--~l~~~~~d~~i~i~d~~~~--------------~~~ 323 (425)
T 1r5m_A 262 -LLSASDDGTLRIWHGGNGNS-QNCFYGHSQSIVSASWVGDD--KVISCSMDGSVRLWSLKQN--------------TLL 323 (425)
T ss_dssp -EEEEETTSCEEEECSSSBSC-SEEECCCSSCEEEEEEETTT--EEEEEETTSEEEEEETTTT--------------EEE
T ss_pred -EEEEcCCCEEEEEECCCCcc-ceEecCCCccEEEEEECCCC--EEEEEeCCCcEEEEECCCC--------------cEe
Confidence 99999999999999998554 77888899999999999998 5899999999999999875 345
Q ss_pred EEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCC--------------------CceeeeeeecccC--Ccee
Q psy4571 244 FIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDS--------------------DTKTMRLDSIRSN--GGIS 301 (437)
Q Consensus 244 ~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~--------------------~~~~~~~~~~~~~--~~~~ 301 (437)
..+..|...|.+++|+|+++ ++++++.||.|++||+++++ .+..+. .+.. .+..
T Consensus 324 ~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~v~~ 399 (425)
T 1r5m_A 324 ALSIVDGVPIFAGRISQDGQ-KYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQ---SSQDNDYIFD 399 (425)
T ss_dssp EEEECTTCCEEEEEECTTSS-EEEEEETTSCEEEEECHHHHC--------------CEECCEEEEEC---CTTCCCCEEE
T ss_pred EecccCCccEEEEEEcCCCC-EEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhc---CcccCCceEE
Confidence 56778999999999999999 88899999999999998776 333333 2333 6778
Q ss_pred eeecCCCCcccccCCCCcccccccccccccccccch
Q psy4571 302 STASPTASSTASESPTPTNSVHEKNYWQGLVLFDIL 337 (437)
Q Consensus 302 ~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~ 337 (437)
++|+|++++|++++.|+. +++||+.
T Consensus 400 ~~~s~~~~~l~~~~~dg~-----------i~iw~~~ 424 (425)
T 1r5m_A 400 LSWNCAGNKISVAYSLQE-----------GSVVAIP 424 (425)
T ss_dssp EEECTTSSEEEEEESSSC-----------CEEEECC
T ss_pred EEccCCCceEEEEecCce-----------EEEEeec
Confidence 899999999999999998 7888764
No 60
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=9.8e-32 Score=260.80 Aligned_cols=263 Identities=14% Similarity=0.174 Sum_probs=204.6
Q ss_pred ccceeEEEEeeCCCcceEEEeeccCceEeeecCC----------------------------------CceeEEEecCCC
Q psy4571 33 SIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNT----------------------------------PFLYDLVVNNYV 78 (437)
Q Consensus 33 ~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~----------------------------------~~~~~~~~~~~~ 78 (437)
..-.|.+++|+ |++++|++|+.|+.|++|+..+ +.+..+.|.+..
T Consensus 27 ~~~~V~~v~~s-~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 27 EADIISTVEFN-HSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp GGGSEEEEEEC-SSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred ccCcEEEEEEC-CCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence 35679999999 9999999999999999999553 346777887775
Q ss_pred ---CeEEEecCceEEEEEeeeccc--------------------------------------------cccCCCcceEEe
Q psy4571 79 ---ANISCILNISILFFEIIFTQN--------------------------------------------FPFPLSRQDVAW 111 (437)
Q Consensus 79 ---~~i~~~~~~~i~~~~~~~~~~--------------------------------------------~~~~~~v~~~~~ 111 (437)
..++++.|+.|++||+..... ..+...|.+++|
T Consensus 106 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 185 (447)
T 3dw8_B 106 NAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISI 185 (447)
T ss_dssp SSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEE
T ss_pred CcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEE
Confidence 345888999999999765322 246778999999
Q ss_pred eCCCCCEEEEEECCCcEEEEEcCCCCCCCCee-------eeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCce
Q psy4571 112 HLLHESLFGSVADDQKLMIWDTRSHNVSKPSH-------TVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKL 184 (437)
Q Consensus 112 sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~-------~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~ 184 (437)
+| ++.+|++| .||.|++||+.... ..+. .+.+|...|.+++|+|++..+|++|+.||.|++||+++++.
T Consensus 186 ~~-~~~~l~s~-~d~~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~ 261 (447)
T 3dw8_B 186 NS-DYETYLSA-DDLRINLWHLEITD--RSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASAL 261 (447)
T ss_dssp CT-TSSEEEEE-CSSEEEEEETTEEE--EEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSS
T ss_pred cC-CCCEEEEe-CCCeEEEEECCCCC--ceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCcc
Confidence 99 68899998 79999999998321 2222 35689999999999999833699999999999999998653
Q ss_pred e---eeEeccCCC------------ceEEEEEcCCCCcEEEEEeCCCeEEEEEcCC-CCCCCCCCCCCCCCCceEEEecC
Q psy4571 185 K---LHSFESHKD------------EIFQVQWSPHNETILASSGTDRRLHVWDLSK-IGEEQSTEDAEDGPPELLFIHGG 248 (437)
Q Consensus 185 ~---~~~~~~h~~------------~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~ 248 (437)
. ...+..|.. .|.+++|+|+++ +|++++. +.|++||++. +..... +.+
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~~~~-~~v~iwd~~~~~~~~~~--------------~~~ 325 (447)
T 3dw8_B 262 CDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGR-YMMTRDY-LSVKVWDLNMENRPVET--------------YQV 325 (447)
T ss_dssp SCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSS-EEEEEES-SEEEEEETTCCSSCSCC--------------EES
T ss_pred ccceeeEeccCCCccccccccccCceEEEEEECCCCC-EEEEeeC-CeEEEEeCCCCccccce--------------eec
Confidence 1 466777775 899999999998 5888888 9999999987 433332 455
Q ss_pred cccc---------------EEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeee--------------------
Q psy4571 249 HTAK---------------ISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDS-------------------- 293 (437)
Q Consensus 249 h~~~---------------v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-------------------- 293 (437)
|... +..++|+|+++ +|++|+.||.|++||+.+++... +....
T Consensus 326 ~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~-~l~s~s~dg~v~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (447)
T 3dw8_B 326 HEYLRSKLCSLYENDCIFDKFECCWNGSDS-VVMTGSYNNFFRMFDRNTKRDIT-LEASRENNKPRTVLKPRKVCASGKR 403 (447)
T ss_dssp CGGGTTTHHHHHHTSGGGCCCCEEECTTSS-EEEEECSTTEEEEEETTTCCEEE-EECCSTTCCTTCBCCCCCEECSSCC
T ss_pred cccccccccccccccccccceEEEECCCCC-EEEEeccCCEEEEEEcCCCccee-eeecccccccccccCCccccccCCc
Confidence 5431 33499999999 77899999999999999886542 11110
Q ss_pred ----------cccCCceeeeecCCCCcccccCCCC
Q psy4571 294 ----------IRSNGGISSTASPTASSTASESPTP 318 (437)
Q Consensus 294 ----------~~~~~~~~~~~s~~g~~l~s~s~d~ 318 (437)
.....+..++|+|+|.+|++++.++
T Consensus 404 ~~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~~~ 438 (447)
T 3dw8_B 404 KKDEISVDSLDFNKKILHTAWHPKENIIAVATTNN 438 (447)
T ss_dssp CTTCEEGGGCCTTSCCCEEEECSSSSEEEEECSSC
T ss_pred ccccccccccccCCceeEEEECCCCCEEEEEecce
Confidence 1123456689999999999998876
No 61
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-31 Score=246.51 Aligned_cols=275 Identities=14% Similarity=0.153 Sum_probs=228.4
Q ss_pred ccccceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEE
Q psy4571 31 SHSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVA 110 (437)
Q Consensus 31 ~~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~ 110 (437)
.-+.-.|.+++| |++.++++|+.|+.|++|+..++....... .+...|.+++
T Consensus 15 ~~h~~~v~~~~~--~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~--------------------------~~~~~v~~~~ 66 (313)
T 3odt_A 15 KGHDQDVRDVVA--VDDSKVASVSRDGTVRLWSKDDQWLGTVVY--------------------------TGQGFLNSVC 66 (313)
T ss_dssp CCCSSCEEEEEE--EETTEEEEEETTSEEEEEEESSSEEEEEEE--------------------------ECSSCEEEEE
T ss_pred hCCCCCcEEEEe--cCCCEEEEEEcCCcEEEEECCCCEEEEEee--------------------------cCCccEEEEE
Confidence 445667899998 678899999999999999987655443321 2346788999
Q ss_pred eeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEec
Q psy4571 111 WHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFE 190 (437)
Q Consensus 111 ~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~ 190 (437)
|+| ++.+|++|+.||.|++|++......+.+..+.+|...|.+++|+ +. .+++++.||.|++|| . ......+.
T Consensus 67 ~~~-~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~-~l~~~~~d~~i~~~d--~-~~~~~~~~ 139 (313)
T 3odt_A 67 YDS-EKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSFQ--DG-VVISGSWDKTAKVWK--E-GSLVYNLQ 139 (313)
T ss_dssp EET-TTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEEE--TT-EEEEEETTSEEEEEE--T-TEEEEEEE
T ss_pred ECC-CCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEec--CC-EEEEEeCCCCEEEEc--C-CcEEEecc
Confidence 999 78899999999999999998766667788889999999999994 55 599999999999999 3 34477888
Q ss_pred cCCCceEEEEEcC-CCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecC-ccccEEEEEEccCCCeEEEE
Q psy4571 191 SHKDEIFQVQWSP-HNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGG-HTAKISDFSWNPNEPWVICS 268 (437)
Q Consensus 191 ~h~~~v~~v~~~p-~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~l~~~p~~~~~l~s 268 (437)
.|..++.+++|+| +++ .+++++.||.|++||.. ..+..+.. |...+.+++|+|++. +++
T Consensus 140 ~~~~~v~~~~~~~~~~~-~l~~~~~d~~i~i~d~~----------------~~~~~~~~~~~~~i~~~~~~~~~~--~~~ 200 (313)
T 3odt_A 140 AHNASVWDAKVVSFSEN-KFLTASADKTIKLWQND----------------KVIKTFSGIHNDVVRHLAVVDDGH--FIS 200 (313)
T ss_dssp CCSSCEEEEEEEETTTT-EEEEEETTSCEEEEETT----------------EEEEEECSSCSSCEEEEEEEETTE--EEE
T ss_pred cCCCceeEEEEccCCCC-EEEEEECCCCEEEEecC----------------ceEEEEeccCcccEEEEEEcCCCe--EEE
Confidence 8999999999998 666 69999999999999933 22344555 889999999999997 779
Q ss_pred EeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCC
Q psy4571 269 VSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGT 348 (437)
Q Consensus 269 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h 348 (437)
++.||.|++||+++++.+..+.. +...+..++|+|++ .+++++.|+. +++||+.+++.+..+.+|
T Consensus 201 ~~~dg~i~i~d~~~~~~~~~~~~---~~~~i~~~~~~~~~-~l~~~~~dg~-----------v~iwd~~~~~~~~~~~~~ 265 (313)
T 3odt_A 201 CSNDGLIKLVDMHTGDVLRTYEG---HESFVYCIKLLPNG-DIVSCGEDRT-----------VRIWSKENGSLKQVITLP 265 (313)
T ss_dssp EETTSEEEEEETTTCCEEEEEEC---CSSCEEEEEECTTS-CEEEEETTSE-----------EEEECTTTCCEEEEEECS
T ss_pred ccCCCeEEEEECCchhhhhhhhc---CCceEEEEEEecCC-CEEEEecCCE-----------EEEEECCCCceeEEEecc
Confidence 99999999999999887776653 45667788999999 6888999988 899999999999999999
Q ss_pred CccccccCCCCCCcccccc------ccccCHH
Q psy4571 349 EEESSDRHSSDNDTEDLNS------IWSMTDE 374 (437)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~------~w~~~~~ 374 (437)
...+..+.++|++..+..+ +|++...
T Consensus 266 ~~~i~~~~~~~~~~~~~~~~dg~i~iw~~~~~ 297 (313)
T 3odt_A 266 AISIWSVDCMSNGDIIVGSSDNLVRIFSQEKS 297 (313)
T ss_dssp SSCEEEEEECTTSCEEEEETTSCEEEEESCGG
T ss_pred CceEEEEEEccCCCEEEEeCCCcEEEEeCCCC
Confidence 9999999999999855433 8888654
No 62
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-32 Score=265.46 Aligned_cols=280 Identities=13% Similarity=0.153 Sum_probs=214.4
Q ss_pred ccccceeEEEEeeCC-CcceEEEeeccCceEeeecC----------------CCceeEEEecCCCCeE-EEecCceEEEE
Q psy4571 31 SHSIYRFYRLCVAEP-FDDAVEERVINEEYKIWKKN----------------TPFLYDLVVNNYVANI-SCILNISILFF 92 (437)
Q Consensus 31 ~~~~~~v~~~~~~~~-~~~~l~tgs~d~~v~iw~~~----------------~~~~~~~~~~~~~~~i-~~~~~~~i~~~ 92 (437)
..+...|.+++|+ | ++++|++|+.|++|++|+.. .+.+..+.+.+....+ ++..|+.|++|
T Consensus 60 ~~h~~~V~~~~~s-~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw 138 (437)
T 3gre_A 60 ENEPNSITSSAVS-PGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKDGQIIVL 138 (437)
T ss_dssp TTTTSCEEEEEEE-CSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred cCCCCceEEEEEC-CCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeCCCEEEEE
Confidence 3456789999999 8 99999999999999999932 3457788888877655 77889999999
Q ss_pred Eee---eccccc----------------cCCCcceEE--eeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeecc--CC
Q psy4571 93 EII---FTQNFP----------------FPLSRQDVA--WHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDA--HT 149 (437)
Q Consensus 93 ~~~---~~~~~~----------------~~~~v~~~~--~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~--h~ 149 (437)
|+. .++... ....+.++. ++| ++.+|++|+.||.|++||++ ..+.+..+.+ |.
T Consensus 139 d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~d~~i~iwd~~---~~~~~~~~~~~~h~ 214 (437)
T 3gre_A 139 KVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNE-EKSLLVALTNLSRVIIFDIR---TLERLQIIENSPRH 214 (437)
T ss_dssp EEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECS-SCEEEEEEETTSEEEEEETT---TCCEEEEEECCGGG
T ss_pred EeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcC-CCCEEEEEeCCCeEEEEeCC---CCeeeEEEccCCCC
Confidence 984 221111 334555666 446 57899999999999999998 5677778877 88
Q ss_pred CCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEec-cCCCceEEEEEcC----CCCcEEEEEeCCCeEEEEEcC
Q psy4571 150 AEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFE-SHKDEIFQVQWSP----HNETILASSGTDRRLHVWDLS 224 (437)
Q Consensus 150 ~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~-~h~~~v~~v~~~p----~~~~~l~sg~~dg~i~vwd~~ 224 (437)
+.|.+++|+|++.. |++|+.||.|++||+++++. +..+. .|..+|.+++|+| ++. +|++|+.||.|++||++
T Consensus 215 ~~v~~~~~s~~~~~-l~s~~~dg~i~iwd~~~~~~-~~~~~~~~~~~v~~~~~~~~~s~~~~-~l~s~~~dg~i~iwd~~ 291 (437)
T 3gre_A 215 GAVSSICIDEECCV-LILGTTRGIIDIWDIRFNVL-IRSWSFGDHAPITHVEVCQFYGKNSV-IVVGGSSKTFLTIWNFV 291 (437)
T ss_dssp CCEEEEEECTTSCE-EEEEETTSCEEEEETTTTEE-EEEEBCTTCEEEEEEEECTTTCTTEE-EEEEESTTEEEEEEETT
T ss_pred CceEEEEECCCCCE-EEEEcCCCeEEEEEcCCccE-EEEEecCCCCceEEEEeccccCCCcc-EEEEEcCCCcEEEEEcC
Confidence 99999999999985 99999999999999998554 66664 7888999997765 455 69999999999999999
Q ss_pred CCCCCCCCCCCCCCCCceEE----------EecC--ccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeee
Q psy4571 225 KIGEEQSTEDAEDGPPELLF----------IHGG--HTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLD 292 (437)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~----------~~~~--h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 292 (437)
++.................+ .+.+ |...|++++|+ +++ +|++|+.|+.|++||+++++....+...
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~-~l~s~~~d~~i~~wd~~~~~~~~~~~~~ 369 (437)
T 3gre_A 292 KGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDK-ILLTDEATSSIVMFSLNELSSSKAVISP 369 (437)
T ss_dssp TTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTE-EEEEEGGGTEEEEEETTCGGGCEEEECC
T ss_pred CCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-Cce-EEEecCCCCeEEEEECCCcccceEEecc
Confidence 87644332211111100000 1233 88889999999 666 8899999999999999999877766531
Q ss_pred e----------------------------------cccCCceeeeecCC--CCcccccCCCCcc
Q psy4571 293 S----------------------------------IRSNGGISSTASPT--ASSTASESPTPTN 320 (437)
Q Consensus 293 ~----------------------------------~~~~~~~~~~~s~~--g~~l~s~s~d~~~ 320 (437)
. .|...+..++++++ +.++++|+.||.+
T Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I 433 (437)
T 3gre_A 370 SRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLI 433 (437)
T ss_dssp --CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETTSCE
T ss_pred cccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCceE
Confidence 0 14556677788887 8899999999993
No 63
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=6.3e-32 Score=272.69 Aligned_cols=318 Identities=14% Similarity=0.114 Sum_probs=253.9
Q ss_pred ccce-eEEEEeeCC--CcceEEEeeccCceEeeecC-------------------CCceeEEEecCCCCeEEEec-C---
Q psy4571 33 SIYR-FYRLCVAEP--FDDAVEERVINEEYKIWKKN-------------------TPFLYDLVVNNYVANISCIL-N--- 86 (437)
Q Consensus 33 ~~~~-v~~~~~~~~--~~~~l~tgs~d~~v~iw~~~-------------------~~~~~~~~~~~~~~~i~~~~-~--- 86 (437)
+... |.+++|+ | ++++|++|+.|+.|++|+.. .+.+..+.+++....+.+.. +
T Consensus 62 h~~~~v~~~~~s-p~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~ 140 (615)
T 1pgu_A 62 HGSSVVTTVKFS-PIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDN 140 (615)
T ss_dssp TTTSCEEEEEEC-SSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSC
T ss_pred CCCceEEEEEEC-cCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCC
Confidence 3455 9999999 8 99999999999999999973 34577788888888775544 3
Q ss_pred -ceEEEEEeee--ccccccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCC---CeEEEEEeCC
Q psy4571 87 -ISILFFEIIF--TQNFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTA---EVNCLSFNPY 160 (437)
Q Consensus 87 -~~i~~~~~~~--~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~---~v~~l~~~~~ 160 (437)
+.|.+||... .....+...|.+++|+|++..++++++.||.|++||+. ..+.+..+.+|.. .|.+++|+|+
T Consensus 141 ~~~v~~~d~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~---~~~~~~~~~~~~~~~~~v~~~~~~~~ 217 (615)
T 1pgu_A 141 FGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGP---PFKFSASDRTHHKQGSFVRDVEFSPD 217 (615)
T ss_dssp SEEEEETTTCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETT---TBEEEEEECSSSCTTCCEEEEEECST
T ss_pred ccEEEEEECCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCC---CcceeeeecccCCCCceEEEEEECCC
Confidence 5899998321 11224667899999999655589999999999999998 5677888889999 9999999999
Q ss_pred -CCcEEEEEeCCCeEEEEeCCCCceeeeEe-c---cCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCC
Q psy4571 161 -SEYILATGSADKTVALWDLRNLKLKLHSF-E---SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDA 235 (437)
Q Consensus 161 -~~~~l~sgs~dg~i~lwd~~~~~~~~~~~-~---~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~ 235 (437)
+. .|++++.||.|++||+++++. +..+ . .|...|.+++|+ +++ .+++++.|+.|++||+++++........
T Consensus 218 ~~~-~l~~~~~dg~i~vwd~~~~~~-~~~~~~~~~~~~~~v~~~~~~-~~~-~l~~~~~d~~i~~wd~~~~~~~~~~~~~ 293 (615)
T 1pgu_A 218 SGE-FVITVGSDRKISCFDGKSGEF-LKYIEDDQEPVQGGIFALSWL-DSQ-KFATVGADATIRVWDVTTSKCVQKWTLD 293 (615)
T ss_dssp TCC-EEEEEETTCCEEEEETTTCCE-EEECCBTTBCCCSCEEEEEES-SSS-EEEEEETTSEEEEEETTTTEEEEEEECC
T ss_pred CCC-EEEEEeCCCeEEEEECCCCCE-eEEecccccccCCceEEEEEc-CCC-EEEEEcCCCcEEEEECCCCcEEEEEcCC
Confidence 88 499999999999999998665 6666 5 899999999999 887 5899999999999999865322110000
Q ss_pred --------------------------------------------------------------------------------
Q psy4571 236 -------------------------------------------------------------------------------- 235 (437)
Q Consensus 236 -------------------------------------------------------------------------------- 235 (437)
T Consensus 294 ~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~ 373 (615)
T 1pgu_A 294 KQQLGNQQVGVVATGNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTVNPLISGSYDGRIMEWSSSSMHQDHSN 373 (615)
T ss_dssp TTCGGGCEEEEEEEETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEETTTTEEEETTSCEEETTTTEEECCCCS
T ss_pred CCcccCceeEEEeCCCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEecCcEEECCCCeEEEEEchhhcCcccC
Confidence
Q ss_pred -----------------CCC------------------------------------------C-----------------
Q psy4571 236 -----------------EDG------------------------------------------P----------------- 239 (437)
Q Consensus 236 -----------------~~~------------------------------------------~----------------- 239 (437)
.++ .
T Consensus 374 ~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 453 (615)
T 1pgu_A 374 LIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVS 453 (615)
T ss_dssp CEEEEECCSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEE
T ss_pred ceEEEEECCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEE
Confidence 000 0
Q ss_pred ------------Cce----------E--EEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecc
Q psy4571 240 ------------PEL----------L--FIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIR 295 (437)
Q Consensus 240 ------------~~~----------~--~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~ 295 (437)
... + ..+.+|...|++++|+|+++ +|++++.||.|++||+.+++.+..+.. .+
T Consensus 454 ~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~~~~dg~i~iw~~~~~~~~~~~~~--~h 530 (615)
T 1pgu_A 454 LSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSET-YIAAGDVMGKILLYDLQSREVKTSRWA--FR 530 (615)
T ss_dssp ECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTTEEEECCSC--CC
T ss_pred EcCCEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCCC-EEEEcCCCCeEEEeeCCCCcceeEeec--CC
Confidence 000 0 33456788999999999999 888999999999999999876655432 14
Q ss_pred cCCceeeeecC----------CCCcccccCCCCcccccccccccccccccchhh-hhhhhhcCCCccccccCCCCCCccc
Q psy4571 296 SNGGISSTASP----------TASSTASESPTPTNSVHEKNYWQGLVLFDILVC-EEQRQLLGTEEESSDRHSSDNDTED 364 (437)
Q Consensus 296 ~~~~~~~~~s~----------~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~-~~~~~~~~h~~~~~~~~~~~~~~~~ 364 (437)
...+..++|+| ++++|++++.|+. |++||+.++ +.+..+.+|...+..+.|+|++. +
T Consensus 531 ~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~-----------i~iw~~~~~~~~~~~~~~h~~~v~~l~~s~~~~-l 598 (615)
T 1pgu_A 531 TSKINAISWKPAEKGANEEEIEEDLVATGSLDTN-----------IFIYSVKRPMKIIKALNAHKDGVNNLLWETPST-L 598 (615)
T ss_dssp SSCEEEEEECCCC------CCSCCEEEEEETTSC-----------EEEEESSCTTCCEEETTSSTTCEEEEEEEETTE-E
T ss_pred CCceeEEEEcCccccccccccCCCEEEEEcCCCc-----------EEEEECCCCceechhhhcCccceEEEEEcCCCC-e
Confidence 56678889999 9999999999998 899999998 78888999999999999999998 6
Q ss_pred ccc-------ccccCH
Q psy4571 365 LNS-------IWSMTD 373 (437)
Q Consensus 365 ~~~-------~w~~~~ 373 (437)
++. +|++..
T Consensus 599 ~s~~~d~~v~iw~~~~ 614 (615)
T 1pgu_A 599 VSSGADACIKRWNVVL 614 (615)
T ss_dssp EEEETTSCEEEEEEC-
T ss_pred EEecCCceEEEEeeec
Confidence 654 787653
No 64
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=2.8e-32 Score=257.00 Aligned_cols=288 Identities=15% Similarity=0.172 Sum_probs=226.3
Q ss_pred EeeecCCCceeEEEecCC-----CCeEEEecCceEEEEEeeecccc---------ccCCCcceEEeeCCC---CCEEEEE
Q psy4571 60 KIWKKNTPFLYDLVVNNY-----VANISCILNISILFFEIIFTQNF---------PFPLSRQDVAWHLLH---ESLFGSV 122 (437)
Q Consensus 60 ~iw~~~~~~~~~~~~~~~-----~~~i~~~~~~~i~~~~~~~~~~~---------~~~~~v~~~~~sp~~---~~~l~~~ 122 (437)
++-..|.+.+..+.+++. ...+++..++.|++|+....+.. .+...|.+++|+|+. +.+|++|
T Consensus 12 ~~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~ 91 (366)
T 3k26_A 12 SLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVA 91 (366)
T ss_dssp EEECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEE
T ss_pred EeecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEe
Confidence 455578899999999873 22557777889999998754432 134679999999943 4699999
Q ss_pred ECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeC-CCCcEEEEEeCCCeEEEEeCCCCceeeeEe---ccCCCceEE
Q psy4571 123 ADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNP-YSEYILATGSADKTVALWDLRNLKLKLHSF---ESHKDEIFQ 198 (437)
Q Consensus 123 ~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~-~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~---~~h~~~v~~ 198 (437)
+.||.|++||+. ..+.+..+.+|...|.+++|+| ++. +|++|+.||.|++||+++++. ...+ ..|...|.+
T Consensus 92 ~~dg~i~v~d~~---~~~~~~~~~~~~~~i~~~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~-~~~~~~~~~~~~~v~~ 166 (366)
T 3k26_A 92 GSRGIIRIINPI---TMQCIKHYVGHGNAINELKFHPRDPN-LLLSVSKDHALRLWNIQTDTL-VAIFGGVEGHRDEVLS 166 (366)
T ss_dssp ETTCEEEEECTT---TCCEEEEEESCCSCEEEEEECSSCTT-EEEEEETTSCEEEEETTTTEE-EEEECSTTSCSSCEEE
T ss_pred cCCCEEEEEEch---hceEeeeecCCCCcEEEEEECCCCCC-EEEEEeCCCeEEEEEeecCeE-EEEecccccccCceeE
Confidence 999999999998 5677888889999999999999 777 599999999999999998654 6666 689999999
Q ss_pred EEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCC--------------CCCCCCceEEEecCccccEEEEEEccCCCe
Q psy4571 199 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTED--------------AEDGPPELLFIHGGHTAKISDFSWNPNEPW 264 (437)
Q Consensus 199 v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~--------------~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~ 264 (437)
++|+|+++ .|++++.||.|++||+++......... .............+|...|.+++|+ ++
T Consensus 167 ~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~- 242 (366)
T 3k26_A 167 ADYDLLGE-KIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GD- 242 (366)
T ss_dssp EEECTTSS-EEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TT-
T ss_pred EEECCCCC-EEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CC-
Confidence 99999998 589999999999999987643221110 0000112234455699999999998 55
Q ss_pred EEEEEeCCCeEEEEeCCCCCCc-----------eeeeeeecccCCceeeeecCC--CCcccccCCCCccccccccccccc
Q psy4571 265 VICSVSEDNIMQEYCDSTDSDT-----------KTMRLDSIRSNGGISSTASPT--ASSTASESPTPTNSVHEKNYWQGL 331 (437)
Q Consensus 265 ~l~s~~~dg~i~iwd~~~~~~~-----------~~~~~~~~~~~~~~~~~~s~~--g~~l~s~s~d~~~~~~~~~~~~~i 331 (437)
++++++.|+.|++||++++... ..+.....+...+..++|+|+ +.++++|+.|+. |
T Consensus 243 ~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~-----------i 311 (366)
T 3k26_A 243 LILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGK-----------L 311 (366)
T ss_dssp EEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSC-----------E
T ss_pred EEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCc-----------E
Confidence 7889999999999999887541 112222334556777899999 999999999998 8
Q ss_pred ccccchhhhhhh----hhcCC--CccccccCCCCCCcccccc
Q psy4571 332 VLFDILVCEEQR----QLLGT--EEESSDRHSSDNDTEDLNS 367 (437)
Q Consensus 332 ~~wd~~~~~~~~----~~~~h--~~~~~~~~~~~~~~~~~~~ 367 (437)
++||+.+++... .+.+| ...+..+.++|++..+++.
T Consensus 312 ~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~ 353 (366)
T 3k26_A 312 YVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAV 353 (366)
T ss_dssp EEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEE
T ss_pred EEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEE
Confidence 999999987665 67777 7899999999999877764
No 65
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=1.8e-32 Score=298.81 Aligned_cols=297 Identities=11% Similarity=0.168 Sum_probs=249.5
Q ss_pred ccceeEEEEeeCCCcceEEEeeccCceEeeecC-----------------------------------------------
Q psy4571 33 SIYRFYRLCVAEPFDDAVEERVINEEYKIWKKN----------------------------------------------- 65 (437)
Q Consensus 33 ~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~----------------------------------------------- 65 (437)
+...|.+++|+ |++..+++++.|+.+++|+..
T Consensus 881 h~~~v~~v~~s-pdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 959 (1249)
T 3sfz_A 881 HLSWVHGVMFS-PDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYL 959 (1249)
T ss_dssp CSSCEEEEEEC-TTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEE
T ss_pred CccceEEEEEC-CCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEc
Confidence 45568999999 999999999999999999842
Q ss_pred -CCceeEEEecCCCCeE-EEecCceEEEEEeeecccc----ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCC
Q psy4571 66 -TPFLYDLVVNNYVANI-SCILNISILFFEIIFTQNF----PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVS 139 (437)
Q Consensus 66 -~~~~~~~~~~~~~~~i-~~~~~~~i~~~~~~~~~~~----~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~ 139 (437)
...+..+.+++....+ ++..++.|.+|+....... .+...|.+++|+| ++.+|++++.||.|++||+.++
T Consensus 960 ~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~-dg~~l~s~~~dg~i~vwd~~~~--- 1035 (1249)
T 3sfz_A 960 PEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTA-DGKTLISSSEDSVIQVWNWQTG--- 1035 (1249)
T ss_dssp CCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECS-SSSCEEEECSSSBEEEEETTTT---
T ss_pred ccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECC-CCCEEEEEcCCCEEEEEECCCC---
Confidence 1245667777887777 5567899999997654432 3677899999999 6889999999999999999843
Q ss_pred CCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEE
Q psy4571 140 KPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLH 219 (437)
Q Consensus 140 ~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~ 219 (437)
. ......|...|.+++|+|++. +++++.||.|++||+.+++. ...+.+|.+.|.+++|+|+++. +++++.|+.|+
T Consensus 1036 ~-~~~~~~~~~~v~~~~~~~~~~--l~~~~~dg~v~vwd~~~~~~-~~~~~~~~~~v~~~~~s~d~~~-l~s~s~d~~v~ 1110 (1249)
T 3sfz_A 1036 D-YVFLQAHQETVKDFRLLQDSR--LLSWSFDGTVKVWNVITGRI-ERDFTCHQGTVLSCAISSDATK-FSSTSADKTAK 1110 (1249)
T ss_dssp E-EECCBCCSSCEEEEEECSSSE--EEEEESSSEEEEEETTTTCC-CEEEECCSSCCCCEEECSSSSS-CEEECCSSCCC
T ss_pred c-eEEEecCCCcEEEEEEcCCCc--EEEEECCCcEEEEECCCCce-eEEEcccCCcEEEEEECCCCCE-EEEEcCCCcEE
Confidence 2 234568999999999999764 88999999999999999665 7788899999999999999985 89999999999
Q ss_pred EEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeee------eee
Q psy4571 220 VWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMR------LDS 293 (437)
Q Consensus 220 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~------~~~ 293 (437)
+||+.++..... +.+|...|++++|+|+++ ++++++.||.|++||+.+++....+. ...
T Consensus 1111 iwd~~~~~~~~~--------------l~~h~~~v~~~~~s~dg~-~lat~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~ 1175 (1249)
T 3sfz_A 1111 IWSFDLLSPLHE--------------LKGHNGCVRCSAFSLDGI-LLATGDDNGEIRIWNVSDGQLLHSCAPISVEEGTA 1175 (1249)
T ss_dssp EECSSSSSCSBC--------------CCCCSSCEEEEEECSSSS-EEEEEETTSCCCEEESSSSCCCCCCCCCC------
T ss_pred EEECCCcceeee--------------eccCCCcEEEEEECCCCC-EEEEEeCCCEEEEEECCCCceEEEecccccccccc
Confidence 999988755443 678999999999999999 89999999999999999998776541 112
Q ss_pred cccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCCccccccCCCCCCcccccc
Q psy4571 294 IRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHSSDNDTEDLNS 367 (437)
Q Consensus 294 ~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~ 367 (437)
.+...+..++|+|+|+++++++ +. +++||+.+|+.+..+.+|...+..+.++|+|..++..
T Consensus 1176 ~~~~~v~~l~fs~dg~~l~s~~--g~-----------v~vwd~~~g~~~~~~~~~~~~i~~~~~s~dg~~l~~~ 1236 (1249)
T 3sfz_A 1176 THGGWVTDVCFSPDSKTLVSAG--GY-----------LKWWNVATGDSSQTFYTNGTNLKKIHVSPDFRTYVTV 1236 (1249)
T ss_dssp -CCSCCCEEEECTTSSCEEEES--SS-----------EEEBCSSSCBCCCCCCCSSCCCCCCEECSSSCCEEEE
T ss_pred ccCceEEEEEECCCCCEEEECC--Ce-----------EEEEECCCCceeeeeeccCCcccEEEECCCCCEEEEe
Confidence 3556677889999999999886 45 8999999999999999999999999999999876653
No 66
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.2e-32 Score=282.31 Aligned_cols=317 Identities=9% Similarity=0.022 Sum_probs=226.1
Q ss_pred cceeEEEEeeCCCcceEEEeeccCceEeeecCCC----------ceeEEEecCCCCeE-EEecCceEEEEEeeeccc---
Q psy4571 34 IYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTP----------FLYDLVVNNYVANI-SCILNISILFFEIIFTQN--- 99 (437)
Q Consensus 34 ~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~----------~~~~~~~~~~~~~i-~~~~~~~i~~~~~~~~~~--- 99 (437)
...|.+++|+ | +++|++++.|++|++|+..++ .+..+.+++....+ ++..|+.|++||+.....
T Consensus 58 ~~~V~~l~fs-p-g~~L~S~s~D~~v~lWd~~~~~~~~~~~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~ 135 (902)
T 2oaj_A 58 RSAIKEMRFV-K-GIYLVVINAKDTVYVLSLYSQKVLTTVFVPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSF 135 (902)
T ss_dssp CCCEEEEEEE-T-TTEEEEEETTCEEEEEETTTCSEEEEEECSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEE
T ss_pred CCCEEEEEEc-C-CCEEEEEECcCeEEEEECCCCcEEEEEcCCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccc
Confidence 4579999999 7 779999999999999997654 45667777777766 567899999999754432
Q ss_pred ------------cccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccC------------------C
Q psy4571 100 ------------FPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAH------------------T 149 (437)
Q Consensus 100 ------------~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h------------------~ 149 (437)
..+...|.+++|+|.+...+++|+.||.| +||++ ..+.+..+..| .
T Consensus 136 ~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~---~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~ 211 (902)
T 2oaj_A 136 KLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLV---ENEIKQSFIYELPPFAPGGDFSEKTNEKRT 211 (902)
T ss_dssp EECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETT---TTEEEEEECCCBCTTCCCSTTCCCTTSCBC
T ss_pred eeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECC---CCceEEEEecccCCcCCCcccccccccccC
Confidence 12557899999999666899999999999 99998 44555555544 5
Q ss_pred CCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeE--e---cc-------------CCCceEEEEEc----CCCCc
Q psy4571 150 AEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHS--F---ES-------------HKDEIFQVQWS----PHNET 207 (437)
Q Consensus 150 ~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~--~---~~-------------h~~~v~~v~~~----p~~~~ 207 (437)
..|.+++|+|+|.+ |++|+.||+|++||+++++. +.. + .. |..+|++++|+ |++..
T Consensus 212 ~~V~~v~fspdg~~-lasgs~Dg~i~lWd~~~g~~-~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ 289 (902)
T 2oaj_A 212 PKVIQSLYHPNSLH-IITIHEDNSLVFWDANSGHM-IMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTS 289 (902)
T ss_dssp CCEEEEEECTTSSE-EEEEETTCCEEEEETTTCCE-EEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEE
T ss_pred CCeEEEEEcCCCCE-EEEEECCCeEEEEECCCCcE-EEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCE
Confidence 78999999999995 99999999999999988654 321 2 11 34468888884 33333
Q ss_pred EEEEEeCC------------------------------------------------------------------------
Q psy4571 208 ILASSGTD------------------------------------------------------------------------ 215 (437)
Q Consensus 208 ~l~sg~~d------------------------------------------------------------------------ 215 (437)
++++|+.|
T Consensus 290 ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~ 369 (902)
T 2oaj_A 290 LLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILL 369 (902)
T ss_dssp EEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEE
T ss_pred EEEeCCCCCCCCCceEEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEE
Confidence 45555332
Q ss_pred ----CeEEEEEcCCCCCCCC-----------------------------------------CCCCCC-------CCC-ce
Q psy4571 216 ----RRLHVWDLSKIGEEQS-----------------------------------------TEDAED-------GPP-EL 242 (437)
Q Consensus 216 ----g~i~vwd~~~~~~~~~-----------------------------------------~~~~~~-------~~~-~~ 242 (437)
|.|++||+.++..... +..... .+. ..
T Consensus 370 ~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~ 449 (902)
T 2oaj_A 370 ILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTA 449 (902)
T ss_dssp EETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEE
T ss_pred EcCCCcEEEEECCCCCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcE
Confidence 3445555433211000 000000 000 00
Q ss_pred ---------E---------------EE--e-----cCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCc-----
Q psy4571 243 ---------L---------------FI--H-----GGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDT----- 286 (437)
Q Consensus 243 ---------~---------------~~--~-----~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~----- 286 (437)
+ .. + .+|...|.+|+|+|+++ +||+|+.||+|++||+.+++..
T Consensus 450 laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~-~LAsgs~DgtV~lwd~~~~~~~~~~~~ 528 (902)
T 2oaj_A 450 FITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETL-ELAVSIETGDVVLFKYEVNQFYSVENR 528 (902)
T ss_dssp EEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTT-EEEEEETTSCEEEEEEEECCC------
T ss_pred EEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCC-eEEEEecCcEEEEEEecCccccCcccc
Confidence 0 00 1 17888999999999999 8999999999999999876320
Q ss_pred -------------------------------------eeeeeeecccCCceeeeecCCCCcccccCCCCccccccccccc
Q psy4571 287 -------------------------------------KTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQ 329 (437)
Q Consensus 287 -------------------------------------~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~ 329 (437)
+.+.....+...+..++||||| +||+|+.|++
T Consensus 529 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~t---------- 597 (902)
T 2oaj_A 529 PESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGS---------- 597 (902)
T ss_dssp ---------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSE----------
T ss_pred CCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCc----------
Confidence 1122222356677888999999 9999999999
Q ss_pred ccccccchhhhhh-----hhhc-CCCccccccCCC-----CCC---cccccc-------cccc
Q psy4571 330 GLVLFDILVCEEQ-----RQLL-GTEEESSDRHSS-----DND---TEDLNS-------IWSM 371 (437)
Q Consensus 330 ~i~~wd~~~~~~~-----~~~~-~h~~~~~~~~~~-----~~~---~~~~~~-------~w~~ 371 (437)
|++||+.++..+ +.+. +|.+.|.++.|+ ||| ..+++. +|++
T Consensus 598 -v~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~ 659 (902)
T 2oaj_A 598 -LMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKI 659 (902)
T ss_dssp -EEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEE
T ss_pred -EEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEE
Confidence 789998776543 3565 999999999999 886 455443 8997
No 67
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=2.9e-32 Score=256.19 Aligned_cols=283 Identities=13% Similarity=0.131 Sum_probs=228.0
Q ss_pred EeeecCCCceeEEEecCCCCeEEEec-----CceEEEEEeeeccc-----cccCCCcceEEeeCCC--CCEEEEEECCCc
Q psy4571 60 KIWKKNTPFLYDLVVNNYVANISCIL-----NISILFFEIIFTQN-----FPFPLSRQDVAWHLLH--ESLFGSVADDQK 127 (437)
Q Consensus 60 ~iw~~~~~~~~~~~~~~~~~~i~~~~-----~~~i~~~~~~~~~~-----~~~~~~v~~~~~sp~~--~~~l~~~~~dg~ 127 (437)
.+...|.+.+..+.|++....+.+.+ |+.|++||+...+. ..+...|.+++|+|++ +.+|++|+.||.
T Consensus 12 ~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~ 91 (357)
T 3i2n_A 12 HIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGN 91 (357)
T ss_dssp EEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSC
T ss_pred hhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCe
Confidence 44566889999999999886664333 89999999875442 3467899999999953 689999999999
Q ss_pred EEEEEcCCCCCCCCeeeeccCCCCeEEEEE------eCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCC----ceE
Q psy4571 128 LMIWDTRSHNVSKPSHTVDAHTAEVNCLSF------NPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKD----EIF 197 (437)
Q Consensus 128 v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~------~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~----~v~ 197 (437)
|++||+.+.. ..+..+.+|...|.+++| +|++.. |++|+.||.|++||+++++.+...+..|.+ .+.
T Consensus 92 i~iwd~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~-l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~ 168 (357)
T 3i2n_A 92 LHIWNLEAPE--MPVYSVKGHKEIINAIDGIGGLGIGEGAPE-IVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCW 168 (357)
T ss_dssp EEEECTTSCS--SCSEEECCCSSCEEEEEEESGGGCC-CCCE-EEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEE
T ss_pred EEEEeCCCCC--ccEEEEEecccceEEEeeccccccCCCccE-EEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceE
Confidence 9999998432 267888899999999965 678884 999999999999999987655777766555 799
Q ss_pred EEE----EcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEcc---CCCeEEEEEe
Q psy4571 198 QVQ----WSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNP---NEPWVICSVS 270 (437)
Q Consensus 198 ~v~----~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p---~~~~~l~s~~ 270 (437)
+++ |+|+++ ++++|+.||.|++||+++... .....|...|.+++|+| ++. .+++++
T Consensus 169 ~~~~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~---------------~~~~~~~~~v~~~~~~~~~~~~~-~l~~~~ 231 (357)
T 3i2n_A 169 TVAFGNAYNQEER-VVCAGYDNGDIKLFDLRNMAL---------------RWETNIKNGVCSLEFDRKDISMN-KLVATS 231 (357)
T ss_dssp EEEEECCCC-CCC-EEEEEETTSEEEEEETTTTEE---------------EEEEECSSCEEEEEESCSSSSCC-EEEEEE
T ss_pred EEEEEeccCCCCC-EEEEEccCCeEEEEECccCce---------------eeecCCCCceEEEEcCCCCCCCC-EEEEEC
Confidence 998 678888 599999999999999988532 22457788999999999 888 788999
Q ss_pred CCCeEEEEeCCCCCCceeeee--eecccCCceeeeecCCCC-cccccCCCCcccccccccccccccccchhh--------
Q psy4571 271 EDNIMQEYCDSTDSDTKTMRL--DSIRSNGGISSTASPTAS-STASESPTPTNSVHEKNYWQGLVLFDILVC-------- 339 (437)
Q Consensus 271 ~dg~i~iwd~~~~~~~~~~~~--~~~~~~~~~~~~~s~~g~-~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~-------- 339 (437)
.||.|++||+++++....+.. ...+...+..++|+|++. ++++++.|+. +++||+.++
T Consensus 232 ~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~-----------i~iwd~~~~~~~~~~~~ 300 (357)
T 3i2n_A 232 LEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGG-----------LHLWKYEYPIQRSKKDS 300 (357)
T ss_dssp STTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSE-----------EEEEEEECCSCC--CCT
T ss_pred CCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCc-----------EEEeecCCCcccccccC
Confidence 999999999998877766542 223566777889999999 8999999998 788887754
Q ss_pred -----------hhhhhhcCCCccccccCCCCCCcccc-cc-------ccccCH
Q psy4571 340 -----------EEQRQLLGTEEESSDRHSSDNDTEDL-NS-------IWSMTD 373 (437)
Q Consensus 340 -----------~~~~~~~~h~~~~~~~~~~~~~~~~~-~~-------~w~~~~ 373 (437)
+.+..+.+|...+..+.++|++..++ +. +|++..
T Consensus 301 ~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~ 353 (357)
T 3i2n_A 301 EGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTK 353 (357)
T ss_dssp TSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC
T ss_pred CCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCC
Confidence 34566789999999999999998876 33 787743
No 68
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.1e-33 Score=266.19 Aligned_cols=291 Identities=9% Similarity=0.017 Sum_probs=219.7
Q ss_pred ceeEEEEeeCCCcceEEEeeccCceEeeecC--------CCceeEEEecCCCCeEEEecCceEEEEEeeecc--ccccCC
Q psy4571 35 YRFYRLCVAEPFDDAVEERVINEEYKIWKKN--------TPFLYDLVVNNYVANISCILNISILFFEIIFTQ--NFPFPL 104 (437)
Q Consensus 35 ~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~--------~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~--~~~~~~ 104 (437)
.+|.+++|+ |+|.++||+|.|++|| +.. .+.++.+.++|.+ .++.+.+|+..... ......
T Consensus 16 ~~v~sv~~S-pDG~~iASas~D~TV~--d~~~~~~l~gh~~~v~~V~FsPdg------~~~~~~~~~~~~~~~~~~~~~~ 86 (588)
T 2j04_A 16 DWKNNLTWA-RDGTLYLTTFPDISIG--QPKYAKDINCNSKNLFHVKEFPLE------FENKLDFELAQQNGLLNSQPVC 86 (588)
T ss_dssp SSSCCEEEC-TTSCEEEECSSSEEEE--EECCCSCCSSBGGGTEEEEEECCC------CCCTTTTSCCCSSCSSTTSCSC
T ss_pred ccEEEEEEC-CCCCEEEEEcCCceee--cccccceecCCCccEEEEEECCCC------CcceEEEEeCCCceEeecCCCC
Confidence 678899999 9999999999999998 533 3445555555544 33344444433222 223467
Q ss_pred CcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCC-----CeEEEEEeCCCCcEEEEEeCCCeEEEEeC
Q psy4571 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTA-----EVNCLSFNPYSEYILATGSADKTVALWDL 179 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~-----~v~~l~~~~~~~~~l~sgs~dg~i~lwd~ 179 (437)
.|.+++||| ++.+||+++.||.|++||.+ . .+..+. |.. .|.+++|||+|++ |++|+.||+|++||+
T Consensus 87 ~V~~vawSP-dG~~LAs~s~dg~V~iwd~~---~--~l~~l~-~~~~~~~~sv~svafSPDG~~-LAsgs~DGtVkIWd~ 158 (588)
T 2j04_A 87 YPRVCKPSP-IDDWMAVLSNNGNVSVFKDN---K--MLTNLD-SKGNLSSRTYHCFEWNPIESS-IVVGNEDGELQFFSI 158 (588)
T ss_dssp CEEEEEECS-SSSCEEEEETTSCEEEEETT---E--EEEECC-CSSCSTTTCEEEEEECSSSSC-EEEEETTSEEEEEEC
T ss_pred cEEEEEECC-CCCEEEEEeCCCcEEEEeCC---c--eeeecc-CCCccccccEEEEEEcCCCCE-EEEEcCCCEEEEEEC
Confidence 899999999 78999999999999999965 2 555555 665 4999999999996 999999999999999
Q ss_pred CCCce------eeeEe----ccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEe-cC
Q psy4571 180 RNLKL------KLHSF----ESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIH-GG 248 (437)
Q Consensus 180 ~~~~~------~~~~~----~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~-~~ 248 (437)
+++.. .+.++ .+|...|.+++|+|+| +++++.|+.|++||+.+.... .....+ .+
T Consensus 159 ~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg---Laass~D~tVrlWd~~~~~~~-----------~~~~tL~~~ 224 (588)
T 2j04_A 159 RKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV---LVAALSNNSVFSMTVSASSHQ-----------PVSRMIQNA 224 (588)
T ss_dssp CCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE---EEEEETTCCEEEECCCSSSSC-----------CCEEEEECC
T ss_pred CCCccccccceeeeeeecccccccccEEEEEEcCCc---EEEEeCCCeEEEEECCCCccc-----------cceeeeccc
Confidence 98642 24565 6778899999999998 678888999999999875421 112334 47
Q ss_pred ccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeee--cCCCCcccccCCCCcccccccc
Q psy4571 249 HTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTA--SPTASSTASESPTPTNSVHEKN 326 (437)
Q Consensus 249 h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--s~~g~~l~s~s~d~~~~~~~~~ 326 (437)
|...|.+++|+ |+ .+++++ ++.|++||+.+++.. .+.. .+...+..+++ +|++..+++++.+|+ ++|..+
T Consensus 225 h~~~V~svaFs--g~-~LASa~-~~tIkLWd~~~~~~~-~~~~--gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d 296 (588)
T 2j04_A 225 SRRKITDLKIV--DY-KVVLTC-PGYVHKIDLKNYSIS-SLKT--GSLENFHIIPLNHEKESTILLMSNKTSY-KVLLED 296 (588)
T ss_dssp CSSCCCCEEEE--TT-EEEEEC-SSEEEEEETTTTEEE-EEEC--SCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESS
T ss_pred ccCcEEEEEEE--CC-EEEEEe-CCeEEEEECCCCeEE-EEEc--CCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec
Confidence 88899999999 56 677776 699999999976442 2221 36667788899 999999999999998 777542
Q ss_pred -------------cccccccccchhhhhhhhhcCCCccccccCCCCCCccccc
Q psy4571 327 -------------YWQGLVLFDILVCEEQRQLLGTEEESSDRHSSDNDTEDLN 366 (437)
Q Consensus 327 -------------~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~ 366 (437)
..+.+++|+...+. ...+.+ ...+..+.++|+|..++.
T Consensus 297 ~~~~spd~~l~a~~d~~v~lW~~~g~~-l~~~~~-~~~I~~va~SPdG~~lA~ 347 (588)
T 2j04_A 297 ELHVTADNIIAPYLEKKFKKWSTIWNE-FNNYET-TLVIHGISLSPDGYSIAI 347 (588)
T ss_dssp SEEEECCCSSHHHHHHHHHHTTTTTTS-SSSSCC-EEEEEEEEECTTSSEEEE
T ss_pred cEEECCCceEEEEcCCEEEEEECCCCc-eeeecc-ceEEEEEEECCCCCEEEE
Confidence 13448899875444 445555 667899999999976664
No 69
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=1.8e-31 Score=255.68 Aligned_cols=283 Identities=14% Similarity=0.169 Sum_probs=222.0
Q ss_pred ecCCcccccceeEEEEeeCCCc-ceEEEeeccCceEeeec---------------CCCceeEEEecC-CCCeE-EEecCc
Q psy4571 26 SALPLSHSIYRFYRLCVAEPFD-DAVEERVINEEYKIWKK---------------NTPFLYDLVVNN-YVANI-SCILNI 87 (437)
Q Consensus 26 ~~~~~~~~~~~v~~~~~~~~~~-~~l~tgs~d~~v~iw~~---------------~~~~~~~~~~~~-~~~~i-~~~~~~ 87 (437)
....+....+....++++ |.. .++++++.|+.|++|+. |.+.+.++.|++ ....+ ++..|+
T Consensus 26 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg 104 (402)
T 2aq5_A 26 EDVRVSQTTWDSGFCAVN-PKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDC 104 (402)
T ss_dssp ESCCBCCCCCSSCSEEEC-SSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTS
T ss_pred ecceeecCccCCCcEEEC-CCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCC
Confidence 344444555566668888 544 45567899999999983 346688999988 55555 677899
Q ss_pred eEEEEEeeecc-------c----cccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeee--ccCCCCeEE
Q psy4571 88 SILFFEIIFTQ-------N----FPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTV--DAHTAEVNC 154 (437)
Q Consensus 88 ~i~~~~~~~~~-------~----~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~--~~h~~~v~~ 154 (437)
.|++|++.... . ..+...|.+++|+|++..+|++|+.||.|++||+. ..+.+..+ .+|...|.+
T Consensus 105 ~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~---~~~~~~~~~~~~~~~~v~~ 181 (402)
T 2aq5_A 105 TVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVG---TGAAVLTLGPDVHPDTIYS 181 (402)
T ss_dssp EEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETT---TTEEEEEECTTTCCSCEEE
T ss_pred eEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECC---CCCccEEEecCCCCCceEE
Confidence 99999986542 1 13677899999999655899999999999999998 45667777 789999999
Q ss_pred EEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEe-ccCCCc-eEEEEEcCCCCcEEEEE---eCCCeEEEEEcCCCCCC
Q psy4571 155 LSFNPYSEYILATGSADKTVALWDLRNLKLKLHSF-ESHKDE-IFQVQWSPHNETILASS---GTDRRLHVWDLSKIGEE 229 (437)
Q Consensus 155 l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~-~~h~~~-v~~v~~~p~~~~~l~sg---~~dg~i~vwd~~~~~~~ 229 (437)
++|+|++.. |++++.||.|++||+++++. +..+ ..|.+. +.+++|+|++. ++++| +.|+.|++||+++....
T Consensus 182 ~~~~~~~~~-l~~~~~d~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~l~~g~~~~~d~~i~iwd~~~~~~~ 258 (402)
T 2aq5_A 182 VDWSRDGAL-ICTSCRDKRVRVIEPRKGTV-VAEKDRPHEGTRPVHAVFVSEGK-ILTTGFSRMSERQVALWDTKHLEEP 258 (402)
T ss_dssp EEECTTSSC-EEEEETTSEEEEEETTTTEE-EEEEECSSCSSSCCEEEECSTTE-EEEEEECTTCCEEEEEEETTBCSSC
T ss_pred EEECCCCCE-EEEEecCCcEEEEeCCCCce-eeeeccCCCCCcceEEEEcCCCc-EEEEeccCCCCceEEEEcCccccCC
Confidence 999999995 99999999999999999665 6666 678776 89999999987 68888 78999999999886532
Q ss_pred CCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCC-ceeeeeeecccCCceeeeecCCC
Q psy4571 230 QSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSD-TKTMRLDSIRSNGGISSTASPTA 308 (437)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~s~~g 308 (437)
.. .....|...+.+++|+|+++.++++|+.||.|++||+.+++. +..+.... +...+..++|+|++
T Consensus 259 ~~------------~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~-~~~~v~~~~~sp~~ 325 (402)
T 2aq5_A 259 LS------------LQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFS-SKESQRGMGYMPKR 325 (402)
T ss_dssp SE------------EEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEEC-CSSCCSEEEECCGG
T ss_pred ce------------EEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccc-cCCcccceEEeccc
Confidence 21 112356678999999999996556777899999999999875 44444332 45677888999999
Q ss_pred CcccccCCCCcccccccccccccccccchhhhh
Q psy4571 309 SSTASESPTPTNSVHEKNYWQGLVLFDILVCEE 341 (437)
Q Consensus 309 ~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~ 341 (437)
.++++++. . +++|++.+++.
T Consensus 326 ~~~~s~~~--~-----------~~~~~l~~~~~ 345 (402)
T 2aq5_A 326 GLEVNKCE--I-----------ARFYKLHERKC 345 (402)
T ss_dssp GSCGGGTE--E-----------EEEEEEETTEE
T ss_pred ccceecce--e-----------EEEEEcCCCcE
Confidence 99887543 4 78999987654
No 70
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=7.2e-32 Score=249.33 Aligned_cols=237 Identities=19% Similarity=0.296 Sum_probs=199.6
Q ss_pred cCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCC
Q psy4571 102 FPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRN 181 (437)
Q Consensus 102 ~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~ 181 (437)
+...|++++|+| ++.+|++|+.||.|++|+.. ..+....+.+|...|.+++|+|++.. |++|+.|+.|++||+++
T Consensus 22 h~~~v~~~~~s~-~~~~l~s~~~dg~i~iw~~~---~~~~~~~~~~h~~~v~~~~~~~~~~~-l~s~~~d~~i~vwd~~~ 96 (312)
T 4ery_A 22 HTKAVSSVKFSP-NGEWLASSSADKLIKIWGAY---DGKFEKTISGHKLGISDVAWSSDSNL-LVSASDDKTLKIWDVSS 96 (312)
T ss_dssp CSSCEEEEEECT-TSSEEEEEETTSCEEEEETT---TCCEEEEECCCSSCEEEEEECTTSSE-EEEEETTSEEEEEETTT
T ss_pred cCCcEEEEEECC-CCCEEEEeeCCCeEEEEeCC---CcccchhhccCCCceEEEEEcCCCCE-EEEECCCCEEEEEECCC
Confidence 567899999999 68899999999999999998 45677788899999999999999985 99999999999999998
Q ss_pred CceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccC
Q psy4571 182 LKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPN 261 (437)
Q Consensus 182 ~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~ 261 (437)
++. +..+.+|...|.+++|+|+++ ++++|+.|+.|++||++++. .+..+..|...|.+++|+|+
T Consensus 97 ~~~-~~~~~~~~~~v~~~~~~~~~~-~l~s~~~d~~i~iwd~~~~~--------------~~~~~~~~~~~v~~~~~~~~ 160 (312)
T 4ery_A 97 GKC-LKTLKGHSNYVFCCNFNPQSN-LIVSGSFDESVRIWDVKTGK--------------CLKTLPAHSDPVSAVHFNRD 160 (312)
T ss_dssp CCE-EEEEECCSSCEEEEEECSSSS-EEEEEETTSCEEEEETTTCC--------------EEEEECCCSSCEEEEEECTT
T ss_pred CcE-EEEEcCCCCCEEEEEEcCCCC-EEEEEeCCCcEEEEECCCCE--------------EEEEecCCCCcEEEEEEcCC
Confidence 665 778889999999999999998 59999999999999998753 34557889999999999999
Q ss_pred CCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhh
Q psy4571 262 EPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEE 341 (437)
Q Consensus 262 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~ 341 (437)
++ ++++++.||.|++||+++++....+.. .+......++|+|+++++++++.|+. +++||+.+++.
T Consensus 161 ~~-~l~~~~~d~~i~~wd~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~d~~-----------i~iwd~~~~~~ 226 (312)
T 4ery_A 161 GS-LIVSSSYDGLCRIWDTASGQCLKTLID--DDNPPVSFVKFSPNGKYILAATLDNT-----------LKLWDYSKGKC 226 (312)
T ss_dssp SS-EEEEEETTSCEEEEETTTCCEEEEECC--SSCCCEEEEEECTTSSEEEEEETTTE-----------EEEEETTTTEE
T ss_pred CC-EEEEEeCCCcEEEEECCCCceeeEEec--cCCCceEEEEECCCCCEEEEEcCCCe-----------EEEEECCCCcE
Confidence 99 788999999999999999876655432 12334556799999999999999998 89999999999
Q ss_pred hhhhcCCCccccccC---CCCCCcccccc-------ccccCH
Q psy4571 342 QRQLLGTEEESSDRH---SSDNDTEDLNS-------IWSMTD 373 (437)
Q Consensus 342 ~~~~~~h~~~~~~~~---~~~~~~~~~~~-------~w~~~~ 373 (437)
+..+.+|......+. ..+++..+++. +|++..
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~ 268 (312)
T 4ery_A 227 LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQT 268 (312)
T ss_dssp EEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTT
T ss_pred EEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCC
Confidence 999988876554432 22445444432 888754
No 71
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.6e-31 Score=250.50 Aligned_cols=293 Identities=13% Similarity=0.110 Sum_probs=237.7
Q ss_pred eEeeecCCCceeEEEecCCCCeE-EEecCceEEEEEeeecccc----ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEc
Q psy4571 59 YKIWKKNTPFLYDLVVNNYVANI-SCILNISILFFEIIFTQNF----PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDT 133 (437)
Q Consensus 59 v~iw~~~~~~~~~~~~~~~~~~i-~~~~~~~i~~~~~~~~~~~----~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~ 133 (437)
...+..|.+.+..+.+++....+ ++..|+.|++||+...+.. .+...|.+++|+| ++.+|++++.||.|++||+
T Consensus 25 ~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~ 103 (369)
T 3zwl_B 25 AIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDC-FTKYCVTGSADYSIKLWDV 103 (369)
T ss_dssp EEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECT-TSSEEEEEETTTEEEEEET
T ss_pred cEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcC-CCCEEEEEeCCCeEEEEEC
Confidence 34467788999999999988776 5667999999997654432 3677899999999 6889999999999999999
Q ss_pred CCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCC-----CeEEEEeCCCCce----------eeeEeccCCC--ce
Q psy4571 134 RSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSAD-----KTVALWDLRNLKL----------KLHSFESHKD--EI 196 (437)
Q Consensus 134 ~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~d-----g~i~lwd~~~~~~----------~~~~~~~h~~--~v 196 (437)
. ..+.+..+. |...|.+++|+|++.. +++++.+ |.|++||++.... ....+..|.. .+
T Consensus 104 ~---~~~~~~~~~-~~~~v~~~~~~~~~~~-l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (369)
T 3zwl_B 104 S---NGQCVATWK-SPVPVKRVEFSPCGNY-FLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAA 178 (369)
T ss_dssp T---TCCEEEEEE-CSSCEEEEEECTTSSE-EEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCE
T ss_pred C---CCcEEEEee-cCCCeEEEEEccCCCE-EEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccce
Confidence 8 456666665 8889999999999995 9999998 9999999986432 2444555666 89
Q ss_pred EEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEE
Q psy4571 197 FQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276 (437)
Q Consensus 197 ~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~ 276 (437)
.+++|+|+++ .+++++.||.|++||+++.. ..+..+..|...|.+++|+|+++ +|++++.|+.|+
T Consensus 179 ~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~-------------~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~ 243 (369)
T 3zwl_B 179 TVAGWSTKGK-YIIAGHKDGKISKYDVSNNY-------------EYVDSIDLHEKSISDMQFSPDLT-YFITSSRDTNSF 243 (369)
T ss_dssp EEEEECGGGC-EEEEEETTSEEEEEETTTTT-------------EEEEEEECCSSCEEEEEECTTSS-EEEEEETTSEEE
T ss_pred eEEEEcCCCC-EEEEEcCCCEEEEEECCCCc-------------EeEEEEecCCCceeEEEECCCCC-EEEEecCCceEE
Confidence 9999999998 58999999999999998732 44566788999999999999999 788999999999
Q ss_pred EEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCccccccccccc---ccccccchhhhhhhhhcCCCcccc
Q psy4571 277 EYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQ---GLVLFDILVCEEQRQLLGTEEESS 353 (437)
Q Consensus 277 iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~---~i~~wd~~~~~~~~~~~~h~~~~~ 353 (437)
+||+++++....+. .......++|+|++.++++++.++...++...... .+++||..+++.+..+.+|...+.
T Consensus 244 v~d~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~ 319 (369)
T 3zwl_B 244 LVDVSTLQVLKKYE----TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLN 319 (369)
T ss_dssp EEETTTCCEEEEEE----CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEE
T ss_pred EEECCCCceeeeec----CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEE
Confidence 99999988777665 45667778999999999999988754444322111 389999999999999999999999
Q ss_pred ccCCCCCCcccccc-------ccccCHHHH
Q psy4571 354 DRHSSDNDTEDLNS-------IWSMTDEQR 376 (437)
Q Consensus 354 ~~~~~~~~~~~~~~-------~w~~~~~~~ 376 (437)
.+.++|++..+++. +|++.....
T Consensus 320 ~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~ 349 (369)
T 3zwl_B 320 TVAISPQGTSYASGGEDGFIRLHHFEKSYF 349 (369)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEEECHHHH
T ss_pred EEEECCCCCEEEEEcCCCeEEEEECccccc
Confidence 99999999877764 899876543
No 72
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=8.5e-32 Score=251.67 Aligned_cols=277 Identities=10% Similarity=0.024 Sum_probs=223.0
Q ss_pred cccceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEe
Q psy4571 32 HSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAW 111 (437)
Q Consensus 32 ~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~ 111 (437)
.+.-.|.+++|+ |++++|++|+.|+.|++|+..++...... .....+...|.+++|
T Consensus 9 ~h~~~v~~~~~s-~~~~~l~~~~~d~~v~iw~~~~~~~~~~~-----------------------~~~~~~~~~v~~~~~ 64 (342)
T 1yfq_A 9 APKDYISDIKII-PSKSLLLITSWDGSLTVYKFDIQAKNVDL-----------------------LQSLRYKHPLLCCNF 64 (342)
T ss_dssp CCSSCEEEEEEE-GGGTEEEEEETTSEEEEEEEETTTTEEEE-----------------------EEEEECSSCEEEEEE
T ss_pred CCCCcEEEEEEc-CCCCEEEEEcCCCeEEEEEeCCCCccccc-----------------------eeeeecCCceEEEEE
Confidence 455679999999 99999999999999999997665410000 001134567899999
Q ss_pred eCCCCC-EEEEEECCCcEEEEEc-CCCCCCCCeeeecc--CCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCC------
Q psy4571 112 HLLHES-LFGSVADDQKLMIWDT-RSHNVSKPSHTVDA--HTAEVNCLSFNPYSEYILATGSADKTVALWDLRN------ 181 (437)
Q Consensus 112 sp~~~~-~l~~~~~dg~v~vwd~-~~~~~~~~~~~~~~--h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~------ 181 (437)
+| ++. +|++|+.||.|++||+ ... ....+.+ |...|.+++|+| +. .|++++.|+.|++||+++
T Consensus 65 ~~-~~~~~l~~~~~dg~i~~wd~~~~~----~~~~~~~~~~~~~v~~l~~~~-~~-~l~s~~~d~~i~iwd~~~~~~~~~ 137 (342)
T 1yfq_A 65 ID-NTDLQIYVGTVQGEILKVDLIGSP----SFQALTNNEANLGICRICKYG-DD-KLIAASWDGLIEVIDPRNYGDGVI 137 (342)
T ss_dssp EE-SSSEEEEEEETTSCEEEECSSSSS----SEEECBSCCCCSCEEEEEEET-TT-EEEEEETTSEEEEECHHHHTTBCE
T ss_pred CC-CCCcEEEEEcCCCeEEEEEeccCC----ceEeccccCCCCceEEEEeCC-CC-EEEEEcCCCeEEEEcccccccccc
Confidence 99 688 9999999999999999 732 3467778 999999999999 77 599999999999999986
Q ss_pred ---CceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCC-CCCCCCCCCCCCCCCceEEEecCccccEEEEE
Q psy4571 182 ---LKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK-IGEEQSTEDAEDGPPELLFIHGGHTAKISDFS 257 (437)
Q Consensus 182 ---~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~ 257 (437)
.+. +..+. |...|.+++|+|++ +++++.|+.|++||++. ..... ......|...+.+++
T Consensus 138 ~~~~~~-~~~~~-~~~~v~~~~~~~~~---l~~~~~d~~i~i~d~~~~~~~~~------------~~~~~~~~~~i~~i~ 200 (342)
T 1yfq_A 138 AVKNLN-SNNTK-VKNKIFTMDTNSSR---LIVGMNNSQVQWFRLPLCEDDNG------------TIEESGLKYQIRDVA 200 (342)
T ss_dssp EEEESC-SSSSS-SCCCEEEEEECSSE---EEEEESTTEEEEEESSCCTTCCC------------EEEECSCSSCEEEEE
T ss_pred cccCCe-eeEEe-eCCceEEEEecCCc---EEEEeCCCeEEEEECCccccccc------------eeeecCCCCceeEEE
Confidence 443 44454 88999999999876 78899999999999987 43221 233557888999999
Q ss_pred Ecc-CCCeEEEEEeCCCeEEEEeCCCC------CCceeeeeeec------ccCCceeeeecCCCCcccccCCCCcccccc
Q psy4571 258 WNP-NEPWVICSVSEDNIMQEYCDSTD------SDTKTMRLDSI------RSNGGISSTASPTASSTASESPTPTNSVHE 324 (437)
Q Consensus 258 ~~p-~~~~~l~s~~~dg~i~iwd~~~~------~~~~~~~~~~~------~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~ 324 (437)
|+| +++ ++++++.||.|++|+++.. +....+..... +...+..++|+|+++++++++.|+.
T Consensus 201 ~~~~~~~-~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~----- 274 (342)
T 1yfq_A 201 LLPKEQE-GYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGI----- 274 (342)
T ss_dssp ECSGGGC-EEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSC-----
T ss_pred ECCCCCC-EEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCce-----
Confidence 999 998 7889999999999999887 55555554221 1226677799999999999999998
Q ss_pred cccccccccccchhhhhhhhhcCC-CccccccCCCCCCccccccccc
Q psy4571 325 KNYWQGLVLFDILVCEEQRQLLGT-EEESSDRHSSDNDTEDLNSIWS 370 (437)
Q Consensus 325 ~~~~~~i~~wd~~~~~~~~~~~~h-~~~~~~~~~~~~~~~~~~~~w~ 370 (437)
+++||+.+++.+..+.+| ...+..+. |++..+++.-++
T Consensus 275 ------i~vwd~~~~~~~~~~~~~h~~~v~~~~--~~~~~l~s~s~D 313 (342)
T 1yfq_A 275 ------ISCWNLQTRKKIKNFAKFNEDSVVKIA--CSDNILCLATSD 313 (342)
T ss_dssp ------EEEEETTTTEEEEECCCCSSSEEEEEE--ECSSEEEEEEEC
T ss_pred ------EEEEcCccHhHhhhhhcccCCCceEec--CCCCeEEEEecC
Confidence 899999999999999998 99999888 888877665443
No 73
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=2.9e-31 Score=247.75 Aligned_cols=276 Identities=18% Similarity=0.238 Sum_probs=225.4
Q ss_pred eecCCCceeEEEecCCC-CeE-EEecCceEEEEEeeeccc---------cccCCCcceEEeeCCCCCEEEEEECCCcEEE
Q psy4571 62 WKKNTPFLYDLVVNNYV-ANI-SCILNISILFFEIIFTQN---------FPFPLSRQDVAWHLLHESLFGSVADDQKLMI 130 (437)
Q Consensus 62 w~~~~~~~~~~~~~~~~-~~i-~~~~~~~i~~~~~~~~~~---------~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~v 130 (437)
...|++.+..+.|+|.. ..+ +++.|++|++||+...+. ..+...|.+++|+| ++.+|++|+.||.|++
T Consensus 34 L~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~-dg~~l~s~~~d~~i~~ 112 (340)
T 4aow_A 34 LKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISS-DGQFALSGSWDGTLRL 112 (340)
T ss_dssp ECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSEEEE
T ss_pred ECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECC-CCCEEEEEcccccceE
Confidence 56799999999999874 444 788999999999764331 22567899999999 7899999999999999
Q ss_pred EEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCc-EE
Q psy4571 131 WDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNET-IL 209 (437)
Q Consensus 131 wd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~-~l 209 (437)
|+.. ..........+...+....+++++.. |++|+.|+.+++||+...........+|...+..++|++++.. ++
T Consensus 113 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~-l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 188 (340)
T 4aow_A 113 WDLT---TGTTTRRFVGHTKDVLSVAFSSDNRQ-IVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPII 188 (340)
T ss_dssp EETT---TTEEEEEEECCSSCEEEEEECTTSSC-EEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEE
T ss_pred Eeec---ccceeeeecCCCCceeEEEEeecCcc-ceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEE
Confidence 9998 45566667778889999999999995 9999999999999998866655567789999999999987533 67
Q ss_pred EEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceee
Q psy4571 210 ASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTM 289 (437)
Q Consensus 210 ~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 289 (437)
++++.|+.|++||+++. +.+..+.+|...|++++|+|+++ +|++|+.||.|++||+++.+++..+
T Consensus 189 ~s~~~d~~i~i~d~~~~--------------~~~~~~~~h~~~v~~~~~s~~~~-~l~s~s~Dg~i~iwd~~~~~~~~~~ 253 (340)
T 4aow_A 189 VSCGWDKLVKVWNLANC--------------KLKTNHIGHTGYLNTVTVSPDGS-LCASGGKDGQAMLWDLNEGKHLYTL 253 (340)
T ss_dssp EEEETTSCEEEEETTTT--------------EEEEEECCCSSCEEEEEECTTSS-EEEEEETTCEEEEEETTTTEEEEEE
T ss_pred EEEcCCCEEEEEECCCC--------------ceeeEecCCCCcEEEEEECCCCC-EEEEEeCCCeEEEEEeccCceeeee
Confidence 89999999999999875 34566889999999999999999 8899999999999999998776665
Q ss_pred eeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhh---------hcCCCccccccCCCCC
Q psy4571 290 RLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQ---------LLGTEEESSDRHSSDN 360 (437)
Q Consensus 290 ~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~---------~~~h~~~~~~~~~~~~ 360 (437)
. ....+..+.++|++.++++ +.|+. |++||+.++..+.. ..+|...+.++.++|+
T Consensus 254 ~----~~~~v~~~~~~~~~~~~~~-~~d~~-----------i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~d 317 (340)
T 4aow_A 254 D----GGDIINALCFSPNRYWLCA-ATGPS-----------IKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSAD 317 (340)
T ss_dssp E----CSSCEEEEEECSSSSEEEE-EETTE-----------EEEEETTTTEEEEEECCC-------CCCCCEEEEEECTT
T ss_pred c----CCceEEeeecCCCCceeec-cCCCE-----------EEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCC
Confidence 4 3455667789998876654 45677 78888776654433 3578889999999999
Q ss_pred Ccccccc-------ccccCH
Q psy4571 361 DTEDLNS-------IWSMTD 373 (437)
Q Consensus 361 ~~~~~~~-------~w~~~~ 373 (437)
|..+++. +|++..
T Consensus 318 g~~l~sgs~Dg~v~iW~~~t 337 (340)
T 4aow_A 318 GQTLFAGYTDNLVRVWQVTI 337 (340)
T ss_dssp SSEEEEEETTSCEEEEEEEC
T ss_pred CCEEEEEeCCCEEEEEeCCC
Confidence 9887764 888743
No 74
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.4e-32 Score=268.89 Aligned_cols=217 Identities=12% Similarity=0.085 Sum_probs=165.2
Q ss_pred CCcceEEEeeccCceEeeecCC---------------CceeEEEecCC------CCeE-EEecCceEEEEEeeeccc---
Q psy4571 45 PFDDAVEERVINEEYKIWKKNT---------------PFLYDLVVNNY------VANI-SCILNISILFFEIIFTQN--- 99 (437)
Q Consensus 45 ~~~~~l~tgs~d~~v~iw~~~~---------------~~~~~~~~~~~------~~~i-~~~~~~~i~~~~~~~~~~--- 99 (437)
|++.++++++.|++|+||+..+ +.+..+.|++. ...+ +++.|++|++||+.....
T Consensus 171 ~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~ 250 (524)
T 2j04_B 171 EHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVH 250 (524)
T ss_dssp -----------CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSS
T ss_pred hhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccc
Confidence 6778899999999999999543 33566778775 2344 677899999999865421
Q ss_pred ------------cccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEE--EEeCCCCcEE
Q psy4571 100 ------------FPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCL--SFNPYSEYIL 165 (437)
Q Consensus 100 ------------~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l--~~~~~~~~~l 165 (437)
..+...|.+++|+| + ..|++|+.||+|++||++++. .+...+.+|...|.++ +|+|++.++|
T Consensus 251 ~~~~~~~p~~~l~~h~~~v~sv~~s~-~-~~lasgs~DgtV~lWD~~~~~--~~~~~~~~H~~~V~sv~~~~s~~g~~~l 326 (524)
T 2j04_B 251 VFKMCEKPSLTLSLADSLITTFDFLS-P-TTVVCGFKNGFVAEFDLTDPE--VPSFYDQVHDSYILSVSTAYSDFEDTVV 326 (524)
T ss_dssp EEECCCSCSEEECCTTTCEEEEEESS-S-SEEEEEETTSEEEEEETTBCS--SCSEEEECSSSCEEEEEEECCTTSCCEE
T ss_pred cceeecCceEEEEcCCCCEEEEEecC-C-CeEEEEeCCCEEEEEECCCCC--CceEEeecccccEEEEEEEcCCCCCeEE
Confidence 12456899999998 3 489999999999999998532 3455678999999999 5678773369
Q ss_pred EEEeCCCeEEEEeCCCCceeeeEeccCCC--ceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceE
Q psy4571 166 ATGSADKTVALWDLRNLKLKLHSFESHKD--EIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELL 243 (437)
Q Consensus 166 ~sgs~dg~i~lwd~~~~~~~~~~~~~h~~--~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~ 243 (437)
+||+.|++|+|||+++++. ...+.+|.. .|.+++|+|+++ .+++++.|++|++||++.+.. +
T Consensus 327 aS~S~D~tvklWD~~~~~~-~~~~~~~~~~~~v~~v~fsp~~~-~l~s~~~d~tv~lwd~~~~~~--------------~ 390 (524)
T 2j04_B 327 STVAVDGYFYIFNPKDIAT-TKTTVSRFRGSNLVPVVYCPQIY-SYIYSDGASSLRAVPSRAAFA--------------V 390 (524)
T ss_dssp EEEETTSEEEEECGGGHHH-HCEEEEECSCCSCCCEEEETTTT-EEEEECSSSEEEEEETTCTTC--------------C
T ss_pred EEeccCCeEEEEECCCCCc-ccccccccccCcccceEeCCCcC-eEEEeCCCCcEEEEECccccc--------------c
Confidence 9999999999999998554 555656653 588999999998 489999999999999988643 2
Q ss_pred EEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCC
Q psy4571 244 FIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDST 282 (437)
Q Consensus 244 ~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~ 282 (437)
..+.+|.+.|++|+|+|+|+ +|++|+.||+|++||+..
T Consensus 391 ~~l~gH~~~V~sva~Sp~g~-~l~Sgs~Dgtv~lwd~~~ 428 (524)
T 2j04_B 391 HPLVSRETTITAIGVSRLHP-MVLAGSADGSLIITNAAR 428 (524)
T ss_dssp EEEEECSSCEEEEECCSSCC-BCEEEETTTEEECCBSCS
T ss_pred eeeecCCCceEEEEeCCCCC-eEEEEECCCEEEEEechH
Confidence 44678999999999999999 788999999999999754
No 75
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.1e-31 Score=251.11 Aligned_cols=260 Identities=15% Similarity=0.203 Sum_probs=205.5
Q ss_pred ccccceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEE
Q psy4571 31 SHSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVA 110 (437)
Q Consensus 31 ~~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~ 110 (437)
.-+.-.|.+++|+ |++++|++|+.|+.|++|+...+...... ....+...|.+++
T Consensus 8 ~~h~~~v~~~~~s-~~~~~l~~~~~dg~i~iw~~~~~~~~~~~------------------------~~~~h~~~v~~~~ 62 (379)
T 3jrp_A 8 NAHNELIHDAVLD-YYGKRLATCSSDKTIKIFEVEGETHKLID------------------------TLTGHEGPVWRVD 62 (379)
T ss_dssp EECCCCEEEEEEC-SSSSEEEEEETTSCEEEEEEETTEEEEEE------------------------EECCCSSCEEEEE
T ss_pred cCCcccEEEEEEc-CCCCEEEEEECCCcEEEEecCCCcceeee------------------------EecCCCCcEEEEE
Confidence 4456679999999 99999999999999999997632211110 0012456789999
Q ss_pred eeCC-CCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCC--CCcEEEEEeCCCeEEEEeCCCCce-ee
Q psy4571 111 WHLL-HESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPY--SEYILATGSADKTVALWDLRNLKL-KL 186 (437)
Q Consensus 111 ~sp~-~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~--~~~~l~sgs~dg~i~lwd~~~~~~-~~ 186 (437)
|+|. ++.+|++|+.||.|++||+.++. ...+..+..|...|.+++|+|+ +. +|++++.||.|++||+++... ..
T Consensus 63 ~~~~~~~~~l~s~~~dg~v~iwd~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~~~~~d~~i~v~d~~~~~~~~~ 140 (379)
T 3jrp_A 63 WAHPKFGTILASCSYDGKVLIWKEENGR-WSQIAVHAVHSASVNSVQWAPHEYGP-LLLVASSDGKVSVVEFKENGTTSP 140 (379)
T ss_dssp ECCGGGCSEEEEEETTSCEEEEEEETTE-EEEEEEECCCSSCEEEEEECCGGGCS-EEEEEETTSEEEEEECCTTSCCCE
T ss_pred eCCCCCCCEEEEeccCCEEEEEEcCCCc-eeEeeeecCCCcceEEEEeCCCCCCC-EEEEecCCCcEEEEecCCCCceee
Confidence 9873 27899999999999999998431 1266777889999999999999 77 599999999999999998632 24
Q ss_pred eEeccCCCceEEEEEcC-------------CCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccE
Q psy4571 187 HSFESHKDEIFQVQWSP-------------HNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKI 253 (437)
Q Consensus 187 ~~~~~h~~~v~~v~~~p-------------~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 253 (437)
..+..|...|.+++|+| ++. ++++|+.|+.|++||++...... ..+..+.+|...|
T Consensus 141 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~----------~~~~~~~~h~~~v 209 (379)
T 3jrp_A 141 IIIDAHAIGVNSASWAPATIEEDGEHNGTKESR-KFVTGGADNLVKIWKYNSDAQTY----------VLESTLEGHSDWV 209 (379)
T ss_dssp EEEECCTTCEEEEEECCCC----------CTTC-EEEEEETTSCEEEEEEETTTTEE----------EEEEEECCCSSCE
T ss_pred EEecCCCCceEEEEEcCccccccccccCCCCCC-EEEEEeCCCeEEEEEecCCCcce----------eeEEEEecccCcE
Confidence 46678999999999999 576 69999999999999998754321 3456678999999
Q ss_pred EEEEEccC---CCeEEEEEeCCCeEEEEeCCCCCCceeeeee--ecccCCceeeeecCCCCcccccCCCCcccccccccc
Q psy4571 254 SDFSWNPN---EPWVICSVSEDNIMQEYCDSTDSDTKTMRLD--SIRSNGGISSTASPTASSTASESPTPTNSVHEKNYW 328 (437)
Q Consensus 254 ~~l~~~p~---~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~--~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~ 328 (437)
.+++|+|+ +. ++++++.||.|++||++++......... ..+...+..++|+|+|+++++++.|+.
T Consensus 210 ~~~~~sp~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~--------- 279 (379)
T 3jrp_A 210 RDVAWSPTVLLRS-YLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNK--------- 279 (379)
T ss_dssp EEEEECCCCSSSE-EEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSS---------
T ss_pred eEEEECCCCCCCC-eEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCc---------
Confidence 99999999 56 8999999999999999987543332222 224456677899999999999999998
Q ss_pred cccccccchhhh
Q psy4571 329 QGLVLFDILVCE 340 (437)
Q Consensus 329 ~~i~~wd~~~~~ 340 (437)
+++||+.++.
T Consensus 280 --i~iw~~~~~~ 289 (379)
T 3jrp_A 280 --VTLWKENLEG 289 (379)
T ss_dssp --EEEEEEEETT
T ss_pred --EEEEeCCCCC
Confidence 7888877543
No 76
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=2.9e-31 Score=267.85 Aligned_cols=290 Identities=16% Similarity=0.185 Sum_probs=240.0
Q ss_pred cccceeEEEEeeCCCcceEEEeeccCceEeeecCCC---------------c-eeEEEecC--CCCeE-EEecCceEEEE
Q psy4571 32 HSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTP---------------F-LYDLVVNN--YVANI-SCILNISILFF 92 (437)
Q Consensus 32 ~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~---------------~-~~~~~~~~--~~~~i-~~~~~~~i~~~ 92 (437)
.....|.+++|+ |+++++++++ ++.+++|+..++ . +..+.+++ ....+ ++..|+.|++|
T Consensus 16 ~~~~~v~~~~~s-pdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw 93 (615)
T 1pgu_A 16 TQRNFTTHLSYD-PTTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVW 93 (615)
T ss_dssp CCTTCCCCCEEE-TTTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEE
T ss_pred CccCceeEEEEC-CCCCEEEEec-CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEE
Confidence 345679999999 9999999998 889999995533 4 78888988 77766 66789999999
Q ss_pred Eeeec--------c---cc-ccCCCcceEEeeCCCCCEEEEEECC----CcEEEEEcCCCCCCCCeeeeccCCCCeEEEE
Q psy4571 93 EIIFT--------Q---NF-PFPLSRQDVAWHLLHESLFGSVADD----QKLMIWDTRSHNVSKPSHTVDAHTAEVNCLS 156 (437)
Q Consensus 93 ~~~~~--------~---~~-~~~~~v~~~~~sp~~~~~l~~~~~d----g~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~ 156 (437)
|+..+ . .+ .+...|.+++|+| ++.+|++++.+ +.|++||. .+.+..+.+|...|.+++
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~~~~~~~~v~~~d~-----~~~~~~~~~~~~~v~~~~ 167 (615)
T 1pgu_A 94 GWTFDKESNSVEVNVKSEFQVLAGPISDISWDF-EGRRLCVVGEGRDNFGVFISWDS-----GNSLGEVSGHSQRINACH 167 (615)
T ss_dssp EEEEEGGGTEEEEEEEEEEECCSSCEEEEEECT-TSSEEEEEECCSSCSEEEEETTT-----CCEEEECCSCSSCEEEEE
T ss_pred eCCCCcccccccccccchhhcccccEEEEEEeC-CCCEEEEeccCCCCccEEEEEEC-----CCcceeeecCCccEEEEE
Confidence 98643 1 11 2577899999999 68889999887 68888883 356778889999999999
Q ss_pred EeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCC---ceEEEEEcCC-CCcEEEEEeCCCeEEEEEcCCCCCCCCC
Q psy4571 157 FNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKD---EIFQVQWSPH-NETILASSGTDRRLHVWDLSKIGEEQST 232 (437)
Q Consensus 157 ~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~---~v~~v~~~p~-~~~~l~sg~~dg~i~vwd~~~~~~~~~~ 232 (437)
|+|++++++++++.|+.|++||+++.+. ...+..|.. .|.+++|+|+ ++ .+++++.||.|++||+++++.
T Consensus 168 ~~~~~~~~l~~~~~d~~v~vwd~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~-~l~~~~~dg~i~vwd~~~~~~---- 241 (615)
T 1pgu_A 168 LKQSRPMRSMTVGDDGSVVFYQGPPFKF-SASDRTHHKQGSFVRDVEFSPDSGE-FVITVGSDRKISCFDGKSGEF---- 241 (615)
T ss_dssp ECSSSSCEEEEEETTTEEEEEETTTBEE-EEEECSSSCTTCCEEEEEECSTTCC-EEEEEETTCCEEEEETTTCCE----
T ss_pred ECCCCCcEEEEEeCCCcEEEEeCCCcce-eeeecccCCCCceEEEEEECCCCCC-EEEEEeCCCeEEEEECCCCCE----
Confidence 9999986799999999999999998554 778888999 9999999999 87 599999999999999987643
Q ss_pred CCCCCCCCceEEEe-c---CccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeec-ccCCceeeeecCC
Q psy4571 233 EDAEDGPPELLFIH-G---GHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSI-RSNGGISSTASPT 307 (437)
Q Consensus 233 ~~~~~~~~~~~~~~-~---~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~s~~ 307 (437)
+..+ . +|...|.+++|+ +++ ++++++.|+.|++||+++++....+..... .......+.+ ++
T Consensus 242 ----------~~~~~~~~~~~~~~v~~~~~~-~~~-~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 308 (615)
T 1pgu_A 242 ----------LKYIEDDQEPVQGGIFALSWL-DSQ-KFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVA-TG 308 (615)
T ss_dssp ----------EEECCBTTBCCCSCEEEEEES-SSS-EEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEE-EE
T ss_pred ----------eEEecccccccCCceEEEEEc-CCC-EEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEe-CC
Confidence 3445 4 899999999999 888 788999999999999999887777664321 1233444455 49
Q ss_pred CCcccccCCCCcccccccccccccccccchhhhhhhhhcCCCccccccCCCCC
Q psy4571 308 ASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHSSDN 360 (437)
Q Consensus 308 g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~~ 360 (437)
+.++++++.++. +++||+.+++.+..+.+|...+..+.+ |+
T Consensus 309 ~~~l~~~~~~g~-----------i~~~d~~~~~~~~~~~~~~~~v~~~~~-~~ 349 (615)
T 1pgu_A 309 NGRIISLSLDGT-----------LNFYELGHDEVLKTISGHNKGITALTV-NP 349 (615)
T ss_dssp TTEEEEEETTSC-----------EEEEETTEEEEEEEECCCSSCEEEEET-TT
T ss_pred CCeEEEEECCCC-----------EEEEECCCCcEEEEEeCCCCCEEEEEe-cC
Confidence 999999999998 788999888888888889888888888 76
No 77
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=5.8e-32 Score=258.25 Aligned_cols=269 Identities=12% Similarity=0.136 Sum_probs=221.7
Q ss_pred eEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeecc----------ccccCCCcceEEeeCCC----C---CEEEE
Q psy4571 59 YKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQ----------NFPFPLSRQDVAWHLLH----E---SLFGS 121 (437)
Q Consensus 59 v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~----------~~~~~~~v~~~~~sp~~----~---~~l~~ 121 (437)
.++...|.+.+..+.+++ ...++++.|+.|++|++.... ...+...|.+++|+| + + .+|++
T Consensus 9 ~~~~~~h~~~i~~~~~~~-~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~~g~~~~~l~s 86 (397)
T 1sq9_A 9 ANAGKAHDADIFSVSACN-SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQ-AIERDAFELCLVAT 86 (397)
T ss_dssp EEESSCSSSCEEEEEECS-SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEE-EEETTTEEEEEEEE
T ss_pred hhhhhhhhcCeEEEEecC-CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEec-ccccCCccccEEEE
Confidence 455667889999999988 455588899999999987654 123567899999999 5 7 89999
Q ss_pred EECCCcEEEEEcCCCCCCCC-----eeeeccC-----CCCeEEEEEe----CCCCcEEEEEeCCCeEEEEeCCC------
Q psy4571 122 VADDQKLMIWDTRSHNVSKP-----SHTVDAH-----TAEVNCLSFN----PYSEYILATGSADKTVALWDLRN------ 181 (437)
Q Consensus 122 ~~~dg~v~vwd~~~~~~~~~-----~~~~~~h-----~~~v~~l~~~----~~~~~~l~sgs~dg~i~lwd~~~------ 181 (437)
++.||.|++||+.+ ... +..+..| ...|.+++|+ |++..+|++++.||.|++||+++
T Consensus 87 ~~~dg~i~iw~~~~---~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 163 (397)
T 1sq9_A 87 TSFSGDLLFYRITR---EDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESN 163 (397)
T ss_dssp EETTSCEEEEEEEE---CTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHH
T ss_pred EcCCCCEEEEEccC---CcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccc
Confidence 99999999999984 344 6777888 5899999999 99983399999999999999987
Q ss_pred Cceeee-----Ee-------ccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecC-
Q psy4571 182 LKLKLH-----SF-------ESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGG- 248 (437)
Q Consensus 182 ~~~~~~-----~~-------~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~- 248 (437)
.+. +. .+ ..|...|.+++|+|++ ++++|+.|+.|++||+++. +.+..+..
T Consensus 164 ~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~dg~i~i~d~~~~--------------~~~~~~~~~ 226 (397)
T 1sq9_A 164 SLT-LNWSPTLELQGTVESPMTPSQFATSVDISERG--LIATGFNNGTVQISELSTL--------------RPLYNFESQ 226 (397)
T ss_dssp HTT-TCCCCEEEEEEEECCSSSSCCCCCEEEECTTS--EEEEECTTSEEEEEETTTT--------------EEEEEEECC
T ss_pred cce-eeccCcceeeeeeccccCCCCCceEEEECCCc--eEEEEeCCCcEEEEECCCC--------------ceeEEEecc
Confidence 443 33 55 4488999999999999 5899999999999999875 34455667
Q ss_pred --c---cccEEEEEEccCCCeEEEEEeCC---CeEEEEeCCCCCCceeeeeee----------cccCCceeeeecCCCCc
Q psy4571 249 --H---TAKISDFSWNPNEPWVICSVSED---NIMQEYCDSTDSDTKTMRLDS----------IRSNGGISSTASPTASS 310 (437)
Q Consensus 249 --h---~~~v~~l~~~p~~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~----------~~~~~~~~~~~s~~g~~ 310 (437)
| ...|.+++|+|++. ++++++.| +.|++||+++++.+..+.... .+...+..++|+|++.+
T Consensus 227 ~~h~~~~~~i~~i~~~~~~~-~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 305 (397)
T 1sq9_A 227 HSMINNSNSIRSVKFSPQGS-LLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGET 305 (397)
T ss_dssp C---CCCCCEEEEEECSSTT-EEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSE
T ss_pred ccccccCCccceEEECCCCC-EEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCE
Confidence 8 89999999999999 78899999 999999999987776664310 04556778899999999
Q ss_pred ccccCCCCcccccccccccccccccchhhhhhhhhc------CC---------------CccccccCCCCCC
Q psy4571 311 TASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLL------GT---------------EEESSDRHSSDND 361 (437)
Q Consensus 311 l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~------~h---------------~~~~~~~~~~~~~ 361 (437)
+++++.|+. +++||+.+++.+..+. +| ...+..+.++|++
T Consensus 306 l~~~~~dg~-----------i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g 366 (397)
T 1sq9_A 306 LCSAGWDGK-----------LRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKG 366 (397)
T ss_dssp EEEEETTSE-----------EEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTT
T ss_pred EEEEeCCCe-----------EEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEecccc
Confidence 999999998 8999999999988888 88 8999999999998
No 78
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=9.2e-31 Score=241.93 Aligned_cols=274 Identities=18% Similarity=0.268 Sum_probs=224.6
Q ss_pred EEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeCCCCC
Q psy4571 38 YRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHLLHES 117 (437)
Q Consensus 38 ~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp~~~~ 117 (437)
.+++|+ +++ +|++| .|++|++||..++.+......+ .+...|.+++|+| +++
T Consensus 29 ~~l~WS-~~~-~lAvg-~D~tV~iWd~~tg~~~~~~~~~------------------------~~~~~V~~v~~~~-~~~ 80 (318)
T 4ggc_A 29 NLVDWS-SGN-VLAVA-LDNSVYLWSASSGDILQLLQME------------------------QPGEYISSVAWIK-EGN 80 (318)
T ss_dssp BCEEEC-TTS-EEEEE-ETTEEEEEETTTCCEEEEEECC------------------------STTCCEEEEEECT-TSS
T ss_pred eEEEEC-CCC-EEEEE-eCCEEEEEECCCCCEEEEEEec------------------------CCCCeEEEEEECC-CCC
Confidence 568898 654 66665 5999999999888776543211 1345688999999 688
Q ss_pred EEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceE
Q psy4571 118 LFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIF 197 (437)
Q Consensus 118 ~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~ 197 (437)
+|++|+.||+|++||++ ..+.+..+.+|...+.++.+. +. ++++|+.++.+++|+.......+..+.+|...+.
T Consensus 81 ~l~sgs~Dg~v~iw~~~---~~~~~~~~~~h~~~~~~~~~~--~~-~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (318)
T 4ggc_A 81 YLAVGTSSAEVQLWDVQ---QQKRLRNMTSHSARVGSLSWN--SY-ILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVC 154 (318)
T ss_dssp EEEEEETTSEEEEEETT---TTEEEEEEECCSSCEEEEEEE--TT-EEEEEETTSEEEEEETTSSSCEEEEEECCSSCEE
T ss_pred EEEEEECCCcEEEeecC---CceeEEEecCccceEEEeecC--CC-EEEEEecCCceEeeecCCCceeEEEEcCccCceE
Confidence 99999999999999999 567788899999998877665 45 5999999999999999987777888899999999
Q ss_pred EEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEE--EEEeCCCeE
Q psy4571 198 QVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVI--CSVSEDNIM 275 (437)
Q Consensus 198 ~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l--~s~~~dg~i 275 (437)
.++++++++ .+++++.|+.|++||+++++.... .......|...|.+++++|++..++ ++++.++.|
T Consensus 155 ~~~~~~~~~-~l~s~~~d~~i~iwd~~~~~~~~~----------~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i 223 (318)
T 4ggc_A 155 GLRWAPDGR-HLASGGNDNLVNVWPSAPGEGGWV----------PLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHI 223 (318)
T ss_dssp EEEECTTSS-EEEEEETTSCEEEEESSCBTTBSC----------CSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEE
T ss_pred EEEEcCCCC-EEEEEecCcceeEEECCCCccccc----------ceeeecccCCceEEEEecCCCCcEEEEEecCCCCEE
Confidence 999999998 589999999999999988654332 2344667888999999999887555 456788999
Q ss_pred EEEeCCCCCCceeeeeeecccCCceeeeecCCCCccccc--CCCCcccccccccccccccccchhhhhhhhhcCCCcccc
Q psy4571 276 QEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASE--SPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESS 353 (437)
Q Consensus 276 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~--s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~ 353 (437)
++||.+......... +...+....++|++..++++ +.|+. |++||+.+++.+..+.+|.+.|.
T Consensus 224 ~lwd~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~~sg~~d~~-----------i~iwd~~~~~~~~~l~gH~~~V~ 288 (318)
T 4ggc_A 224 RIWNVCSGACLSAVD----AHSQVCSILWSPHYKELISGHGFAQNQ-----------LVIWKYPTMAKVAELKGHTSRVL 288 (318)
T ss_dssp EEEETTTCCEEEEEE----CSSCEEEEEEETTTTEEEEEECTTTCC-----------EEEEETTTCCEEEEECCCSSCEE
T ss_pred EEEeccccccccccc----ceeeeeeeeecccccceEEEEEcCCCE-----------EEEEECCCCcEEEEEcCCCCCEE
Confidence 999999876554433 45567777999999977654 46777 89999999999999999999999
Q ss_pred ccCCCCCCcccccc-------cccc
Q psy4571 354 DRHSSDNDTEDLNS-------IWSM 371 (437)
Q Consensus 354 ~~~~~~~~~~~~~~-------~w~~ 371 (437)
++.++|+|..++++ +|++
T Consensus 289 ~l~~spdg~~l~S~s~D~~v~iWd~ 313 (318)
T 4ggc_A 289 SLTMSPDGATVASAAADETLRLWRC 313 (318)
T ss_dssp EEEECTTSSCEEEEETTTEEEEECC
T ss_pred EEEEcCCCCEEEEEecCCeEEEEEC
Confidence 99999999988765 7876
No 79
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=9.8e-32 Score=280.48 Aligned_cols=272 Identities=18% Similarity=0.243 Sum_probs=232.3
Q ss_pred ccccceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEE
Q psy4571 31 SHSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVA 110 (437)
Q Consensus 31 ~~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~ 110 (437)
.-+.-.|.+++|+ |+++.+++|+.|+.|++|+..++....... .+...|.+++
T Consensus 10 ~~h~~~v~~i~~s-p~~~~la~~~~~g~v~iwd~~~~~~~~~~~--------------------------~~~~~v~~~~ 62 (814)
T 3mkq_A 10 SNRSDRVKGIDFH-PTEPWVLTTLYSGRVEIWNYETQVEVRSIQ--------------------------VTETPVRAGK 62 (814)
T ss_dssp EEECSCEEEEEEC-SSSSEEEEEETTSEEEEEETTTTEEEEEEE--------------------------CCSSCEEEEE
T ss_pred ecCCCceEEEEEC-CCCCEEEEEeCCCEEEEEECCCCceEEEEe--------------------------cCCCcEEEEE
Confidence 4456679999999 999999999999999999987765543321 2345788999
Q ss_pred eeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEec
Q psy4571 111 WHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFE 190 (437)
Q Consensus 111 ~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~ 190 (437)
|+| ++.+|++|+.||.|++||+. ..+.+..+.+|.+.|.+++|+|+++. |++++.||.|++||++++......+.
T Consensus 63 ~s~-~~~~l~~~~~dg~i~vw~~~---~~~~~~~~~~~~~~v~~~~~s~~~~~-l~~~~~dg~i~vw~~~~~~~~~~~~~ 137 (814)
T 3mkq_A 63 FIA-RKNWIIVGSDDFRIRVFNYN---TGEKVVDFEAHPDYIRSIAVHPTKPY-VLSGSDDLTVKLWNWENNWALEQTFE 137 (814)
T ss_dssp EEG-GGTEEEEEETTSEEEEEETT---TCCEEEEEECCSSCEEEEEECSSSSE-EEEEETTSEEEEEEGGGTSEEEEEEE
T ss_pred EeC-CCCEEEEEeCCCeEEEEECC---CCcEEEEEecCCCCEEEEEEeCCCCE-EEEEcCCCEEEEEECCCCceEEEEEc
Confidence 999 68899999999999999998 56778888899999999999999995 99999999999999998756677888
Q ss_pred cCCCceEEEEEcC-CCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEcc--CCCeEEE
Q psy4571 191 SHKDEIFQVQWSP-HNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNP--NEPWVIC 267 (437)
Q Consensus 191 ~h~~~v~~v~~~p-~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p--~~~~~l~ 267 (437)
+|...|.+++|+| ++. .+++++.||.|++||+........ ....|...+.+++|+| +++ +++
T Consensus 138 ~~~~~v~~~~~~p~~~~-~l~~~~~dg~v~vwd~~~~~~~~~-------------~~~~~~~~v~~~~~~~~~~~~-~l~ 202 (814)
T 3mkq_A 138 GHEHFVMCVAFNPKDPS-TFASGCLDRTVKVWSLGQSTPNFT-------------LTTGQERGVNYVDYYPLPDKP-YMI 202 (814)
T ss_dssp CCSSCEEEEEEETTEEE-EEEEEETTSEEEEEETTCSSCSEE-------------EECCCTTCCCEEEECCSTTCC-EEE
T ss_pred CCCCcEEEEEEEcCCCC-EEEEEeCCCeEEEEECCCCcceeE-------------EecCCCCCEEEEEEEECCCCC-EEE
Confidence 9999999999999 665 699999999999999977543222 2234447899999999 888 788
Q ss_pred EEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcC
Q psy4571 268 SVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLG 347 (437)
Q Consensus 268 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~ 347 (437)
+++.||.|++||+++++....+.. +...+..++|+|+|.++++++.|+. +++||..+++.+..+..
T Consensus 203 ~~~~dg~i~~~d~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~dg~-----------v~vwd~~~~~~~~~~~~ 268 (814)
T 3mkq_A 203 TASDDLTIKIWDYQTKSCVATLEG---HMSNVSFAVFHPTLPIIISGSEDGT-----------LKIWNSSTYKVEKTLNV 268 (814)
T ss_dssp EECTTSEEEEEETTTTEEEEEEEC---CSSCEEEEEECSSSSEEEEEETTSC-----------EEEEETTTCSEEEEECC
T ss_pred EEeCCCEEEEEECCCCcEEEEEcC---CCCCEEEEEEcCCCCEEEEEeCCCe-----------EEEEECCCCcEEEEeec
Confidence 999999999999999877666543 4556777899999999999999998 89999999999999999
Q ss_pred CCccccccCCCCCCcc
Q psy4571 348 TEEESSDRHSSDNDTE 363 (437)
Q Consensus 348 h~~~~~~~~~~~~~~~ 363 (437)
|...+..+.++|++..
T Consensus 269 ~~~~v~~~~~~~~~~~ 284 (814)
T 3mkq_A 269 GLERSWCIATHPTGRK 284 (814)
T ss_dssp SSSSEEEEEECTTCGG
T ss_pred CCCcEEEEEEccCCCc
Confidence 9999999999999874
No 80
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=3.5e-31 Score=256.10 Aligned_cols=251 Identities=69% Similarity=1.027 Sum_probs=209.4
Q ss_pred cccceeEEEEeeCCC-cceEEEeeccCceEeeecCC---------------------CceeEEEecCCCC-eE-EEecCc
Q psy4571 32 HSIYRFYRLCVAEPF-DDAVEERVINEEYKIWKKNT---------------------PFLYDLVVNNYVA-NI-SCILNI 87 (437)
Q Consensus 32 ~~~~~v~~~~~~~~~-~~~l~tgs~d~~v~iw~~~~---------------------~~~~~~~~~~~~~-~i-~~~~~~ 87 (437)
.+...|.+++|+ |. +.++++|+.|+.|++|+... +.+..+.|++... .+ ++..++
T Consensus 126 ~h~~~v~~l~~~-p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg 204 (430)
T 2xyi_A 126 NHEGEVNRARYM-PQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDH 204 (430)
T ss_dssp EESSCCSEEEEE-TTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTS
T ss_pred cCCCcEEEEEEC-CCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCC
Confidence 345679999999 65 78999999999999999542 2356677877766 44 667899
Q ss_pred eEEEEEeeecc----------c-cccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEE
Q psy4571 88 SILFFEIIFTQ----------N-FPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLS 156 (437)
Q Consensus 88 ~i~~~~~~~~~----------~-~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~ 156 (437)
.|++|++.... . ..+...|.+++|+|.++.+|++++.||.|++||++.....+.+..+..|...|++++
T Consensus 205 ~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~ 284 (430)
T 2xyi_A 205 TICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLS 284 (430)
T ss_dssp CEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEE
T ss_pred eEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEE
Confidence 99999976521 1 145678999999998889999999999999999996544467778889999999999
Q ss_pred EeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCC
Q psy4571 157 FNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAE 236 (437)
Q Consensus 157 ~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~ 236 (437)
|+|++.++|++|+.||.|++||+++...++..+..|...|.+++|+|+++.+|++++.|+.|++||+.............
T Consensus 285 ~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~ 364 (430)
T 2xyi_A 285 FNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAE 364 (430)
T ss_dssp ECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHH
T ss_pred eCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccc
Confidence 99999888999999999999999986666888889999999999999998789999999999999998754433222223
Q ss_pred CCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCC
Q psy4571 237 DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTD 283 (437)
Q Consensus 237 ~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~ 283 (437)
.++..++....+|...|++++|+|++++++++++.||.|++|++...
T Consensus 365 ~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 365 DGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp HCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred cCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcccc
Confidence 34457788889999999999999999988999999999999999754
No 81
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=8.8e-31 Score=254.37 Aligned_cols=283 Identities=17% Similarity=0.223 Sum_probs=229.8
Q ss_pred eEEEEeeCCCcceEEEeeccCceEeeecCC-----------CceeEEEecCCCCeEEEecCceEEEEEeeecccc----c
Q psy4571 37 FYRLCVAEPFDDAVEERVINEEYKIWKKNT-----------PFLYDLVVNNYVANISCILNISILFFEIIFTQNF----P 101 (437)
Q Consensus 37 v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~-----------~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~----~ 101 (437)
+.++.+ +++++++|+.|++|++|+..+ +.+..+.+.+ ...++++.|+.|++||+..++.. .
T Consensus 122 ~~~~~~---~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~-~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 197 (445)
T 2ovr_B 122 ITCLQF---CGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRD-NIIISGSTDRTLKVWNAETGECIHTLYG 197 (445)
T ss_dssp EEEEEE---ETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEET-TEEEEEETTSCEEEEETTTTEEEEEECC
T ss_pred EEEEEE---cCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEecC-CEEEEEeCCCeEEEEECCcCcEEEEECC
Confidence 444444 588999999999999999654 3455555542 23447788999999997654432 3
Q ss_pred cCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCC
Q psy4571 102 FPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRN 181 (437)
Q Consensus 102 ~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~ 181 (437)
+...|.+++|++ ..+++|+.||.|++||+. ..+.+..+.+|...|.+++| ++.. +++|+.||.|++||+++
T Consensus 198 h~~~v~~~~~~~---~~l~s~s~dg~i~~wd~~---~~~~~~~~~~~~~~v~~~~~--~~~~-l~~~~~dg~i~iwd~~~ 268 (445)
T 2ovr_B 198 HTSTVRCMHLHE---KRVVSGSRDATLRVWDIE---TGQCLHVLMGHVAAVRCVQY--DGRR-VVSGAYDFMVKVWDPET 268 (445)
T ss_dssp CSSCEEEEEEET---TEEEEEETTSEEEEEESS---SCCEEEEEECCSSCEEEEEE--CSSC-EEEEETTSCEEEEEGGG
T ss_pred CCCcEEEEEecC---CEEEEEeCCCEEEEEECC---CCcEEEEEcCCcccEEEEEE--CCCE-EEEEcCCCEEEEEECCC
Confidence 667899999964 579999999999999998 56778888899999999999 5664 99999999999999998
Q ss_pred CceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccC
Q psy4571 182 LKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPN 261 (437)
Q Consensus 182 ~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~ 261 (437)
++. +..+.+|...|.+++| ++. .+++|+.|+.|++||+++++ .+..+.+|...+.++.++
T Consensus 269 ~~~-~~~~~~~~~~v~~~~~--~~~-~l~~~~~d~~i~i~d~~~~~--------------~~~~~~~~~~~v~~~~~~-- 328 (445)
T 2ovr_B 269 ETC-LHTLQGHTNRVYSLQF--DGI-HVVSGSLDTSIRVWDVETGN--------------CIHTLTGHQSLTSGMELK-- 328 (445)
T ss_dssp TEE-EEEECCCSSCEEEEEE--CSS-EEEEEETTSCEEEEETTTCC--------------EEEEECCCCSCEEEEEEE--
T ss_pred CcE-eEEecCCCCceEEEEE--CCC-EEEEEeCCCeEEEEECCCCC--------------EEEEEcCCcccEEEEEEe--
Confidence 554 7888899999999999 566 58999999999999998863 345578899999988874
Q ss_pred CCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhh
Q psy4571 262 EPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEE 341 (437)
Q Consensus 262 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~ 341 (437)
++ ++++|+.||.|++||+++++....+.....+...+..+++ ++.++++|+.|+. +++||+.+++.
T Consensus 329 ~~-~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~-----------v~iwd~~~~~~ 394 (445)
T 2ovr_B 329 DN-ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQF--NKNFVITSSDDGT-----------VKLWDLKTGEF 394 (445)
T ss_dssp TT-EEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEE--CSSEEEEEETTSE-----------EEEEETTTCCE
T ss_pred CC-EEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEE--CCCEEEEEeCCCe-----------EEEEECCCCce
Confidence 45 7889999999999999999887777643334445555566 5789999999998 89999999998
Q ss_pred hhhh-----cCCCccccccCCCCCCccccc
Q psy4571 342 QRQL-----LGTEEESSDRHSSDNDTEDLN 366 (437)
Q Consensus 342 ~~~~-----~~h~~~~~~~~~~~~~~~~~~ 366 (437)
+..+ .+|...+..+.++|++..++.
T Consensus 395 ~~~~~~~~~~~~~~~v~~~~~s~~~~~la~ 424 (445)
T 2ovr_B 395 IRNLVTLESGGSGGVVWRIRASNTKLVCAV 424 (445)
T ss_dssp EEEEEECTTGGGTCEEEEEEECSSEEEEEE
T ss_pred eeeeeccccCCCCceEEEEEecCCEEEEEE
Confidence 8877 578888999999999876554
No 82
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=5.6e-31 Score=248.90 Aligned_cols=295 Identities=14% Similarity=0.158 Sum_probs=226.3
Q ss_pred eeecCCCceeEEEecCCCCeEEEe-cCceEEEEEeeecc-----cc-ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEc
Q psy4571 61 IWKKNTPFLYDLVVNNYVANISCI-LNISILFFEIIFTQ-----NF-PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDT 133 (437)
Q Consensus 61 iw~~~~~~~~~~~~~~~~~~i~~~-~~~~i~~~~~~~~~-----~~-~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~ 133 (437)
++..+.+.+..+.+++....+.+. .++.|++||....+ .+ .+...|.+++|+| ++.+|++++.||.|++||+
T Consensus 3 ~~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~~~~~dg~i~vwd~ 81 (372)
T 1k8k_C 3 YHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAP-DSNRIVTCGTDRNAYVWTL 81 (372)
T ss_dssp EEESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEET-TTTEEEEEETTSCEEEEEE
T ss_pred eecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeC-CCCEEEEEcCCCeEEEEEC
Confidence 455678889999999998877544 89999999987553 12 3677899999999 7889999999999999999
Q ss_pred CCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCce---eeeEeccCCCceEEEEEcCCCCcEEE
Q psy4571 134 RSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKL---KLHSFESHKDEIFQVQWSPHNETILA 210 (437)
Q Consensus 134 ~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~---~~~~~~~h~~~v~~v~~~p~~~~~l~ 210 (437)
.+.+ ......+..|...|.+++|+|++.. |++|+.||.|++||++.... .......|...|.+++|+|+++ .++
T Consensus 82 ~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~ 158 (372)
T 1k8k_C 82 KGRT-WKPTLVILRINRAARCVRWAPNEKK-FAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSV-LLA 158 (372)
T ss_dssp ETTE-EEEEEECCCCSSCEEEEEECTTSSE-EEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSS-EEE
T ss_pred CCCe-eeeeEEeecCCCceeEEEECCCCCE-EEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCC-EEE
Confidence 7431 1223344678999999999999985 99999999999999998652 2333467899999999999998 589
Q ss_pred EEeCCCeEEEEEcCCCCCCCCCCC----CCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCc
Q psy4571 211 SSGTDRRLHVWDLSKIGEEQSTED----AEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDT 286 (437)
Q Consensus 211 sg~~dg~i~vwd~~~~~~~~~~~~----~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~ 286 (437)
+|+.||.|++||++.......... ......+.+..+.+|...|.+++|+|+++ ++++++.|+.|++||+++++.+
T Consensus 159 ~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~ 237 (372)
T 1k8k_C 159 AGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGS-RVAWVSHDSTVCLADADKKMAV 237 (372)
T ss_dssp EEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSS-EEEEEETTTEEEEEEGGGTTEE
T ss_pred EEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCC-EEEEEeCCCEEEEEECCCCcee
Confidence 999999999999865432211000 00112356677889999999999999999 7889999999999999999877
Q ss_pred eeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchh--h-------------------------
Q psy4571 287 KTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILV--C------------------------- 339 (437)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~--~------------------------- 339 (437)
..+.. +...+..++|+|++.++++| .|+. +++||+.+ +
T Consensus 238 ~~~~~---~~~~v~~~~~~~~~~~l~~~-~d~~-----------i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (372)
T 1k8k_C 238 ATLAS---ETLPLLAVTFITESSLVAAG-HDCF-----------PVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERF 302 (372)
T ss_dssp EEEEC---SSCCEEEEEEEETTEEEEEE-TTSS-----------CEEEEEETTTTEEEECCCCCCC--------CHHHHH
T ss_pred EEEcc---CCCCeEEEEEecCCCEEEEE-eCCe-----------EEEEEccCcCceEEEeeccCccccchhhhcchhhhh
Confidence 77653 44567788999999999988 7787 55666555 2
Q ss_pred -------hhh------hhh-cCCCccccccCCC-CCC---cccccc-------ccccCHHH
Q psy4571 340 -------EEQ------RQL-LGTEEESSDRHSS-DND---TEDLNS-------IWSMTDEQ 375 (437)
Q Consensus 340 -------~~~------~~~-~~h~~~~~~~~~~-~~~---~~~~~~-------~w~~~~~~ 375 (437)
+.. ..+ .+|...+.++.+. ++| ..+++. +|++...+
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~~~ 363 (372)
T 1k8k_C 303 QNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLE 363 (372)
T ss_dssp HHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHHH
T ss_pred hhcccccccccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEecChh
Confidence 111 233 4999999999744 666 666654 88885543
No 83
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=3e-32 Score=263.94 Aligned_cols=221 Identities=14% Similarity=0.187 Sum_probs=180.7
Q ss_pred ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCC
Q psy4571 101 PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180 (437)
Q Consensus 101 ~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~ 180 (437)
++...|+|++|+|.++.+||+|+.||.|+|||+...+ ......+.+|.+.|++++|+|.+..+|++|+.||+|++||++
T Consensus 117 ~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~-~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~ 195 (435)
T 4e54_B 117 PFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKD-KPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFK 195 (435)
T ss_dssp ECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCS-CCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETT
T ss_pred CCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCC-ceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeecc
Confidence 3556799999999888899999999999999998542 234455678999999999998543369999999999999998
Q ss_pred CCceeeeEec--cCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEE
Q psy4571 181 NLKLKLHSFE--SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 258 (437)
Q Consensus 181 ~~~~~~~~~~--~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~ 258 (437)
+... ..... .+...+.+++|+|++. +|++|+.||.|++||++.. . +..+.+|...|.+++|
T Consensus 196 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~l~~g~~dg~i~~wd~~~~-~--------------~~~~~~h~~~v~~v~~ 258 (435)
T 4e54_B 196 GNIL-RVFASSDTINIWFCSLDVSASSR-MVVTGDNVGNVILLNMDGK-E--------------LWNLRMHKKKVTHVAL 258 (435)
T ss_dssp SCEE-EEEECCSSCSCCCCCEEEETTTT-EEEEECSSSBEEEEESSSC-B--------------CCCSBCCSSCEEEEEE
T ss_pred CCce-eEEeccCCCCccEEEEEECCCCC-EEEEEeCCCcEeeeccCcc-e--------------eEEEecccceEEeeee
Confidence 7432 22222 2345678999999998 5999999999999998652 1 2336789999999999
Q ss_pred ccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchh
Q psy4571 259 NPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILV 338 (437)
Q Consensus 259 ~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~ 338 (437)
+|+++.++++|+.|+.|++||+++.+....+.....|...+..++|+|+|.+|++++.|+. |++||+.+
T Consensus 259 ~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~-----------i~iwd~~~ 327 (435)
T 4e54_B 259 NPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSE-----------IRVYSASQ 327 (435)
T ss_dssp CTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSC-----------EEEEESSS
T ss_pred cCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCE-----------EEEEECCC
Confidence 9999888999999999999999988776666554456677788899999999999999999 89999988
Q ss_pred hhhhhhhcCCCc
Q psy4571 339 CEEQRQLLGTEE 350 (437)
Q Consensus 339 ~~~~~~~~~h~~ 350 (437)
++....+.+|..
T Consensus 328 ~~~~~~~~~~~~ 339 (435)
T 4e54_B 328 WDCPLGLIPHPH 339 (435)
T ss_dssp SSSEEEECCCCC
T ss_pred CccceEEecccc
Confidence 887777766543
No 84
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=3e-31 Score=254.19 Aligned_cols=272 Identities=15% Similarity=0.256 Sum_probs=214.9
Q ss_pred EecCCCCeE--EEecCceEEEEEeeeccc--------cccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCC---
Q psy4571 73 VVNNYVANI--SCILNISILFFEIIFTQN--------FPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVS--- 139 (437)
Q Consensus 73 ~~~~~~~~i--~~~~~~~i~~~~~~~~~~--------~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~--- 139 (437)
.+++....+ ++..+|.|.+|++..... ..+...|.+++|+|.++.+|++|+.||.|++||+.+....
T Consensus 41 ~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~ 120 (402)
T 2aq5_A 41 AVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPL 120 (402)
T ss_dssp EECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCB
T ss_pred EECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCcccc
Confidence 344444333 346789999999743221 1367789999999977889999999999999999854211
Q ss_pred -CCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEe--ccCCCceEEEEEcCCCCcEEEEEeCCC
Q psy4571 140 -KPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSF--ESHKDEIFQVQWSPHNETILASSGTDR 216 (437)
Q Consensus 140 -~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~--~~h~~~v~~v~~~p~~~~~l~sg~~dg 216 (437)
.++..+.+|...|.+++|+|++..+|++|+.||.|++||+++++. +..+ ..|...|.+++|+|+++. |++++.||
T Consensus 121 ~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~ 198 (402)
T 2aq5_A 121 REPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAA-VLTLGPDVHPDTIYSVDWSRDGAL-ICTSCRDK 198 (402)
T ss_dssp CSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEE-EEEECTTTCCSCEEEEEECTTSSC-EEEEETTS
T ss_pred CCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCc-cEEEecCCCCCceEEEEECCCCCE-EEEEecCC
Confidence 567788899999999999999865799999999999999998655 6777 789999999999999985 89999999
Q ss_pred eEEEEEcCCCCCCCCCCCCCCCCCceEEEe-cCcccc-EEEEEEccCCCeEEEEE---eCCCeEEEEeCCCCCCceeeee
Q psy4571 217 RLHVWDLSKIGEEQSTEDAEDGPPELLFIH-GGHTAK-ISDFSWNPNEPWVICSV---SEDNIMQEYCDSTDSDTKTMRL 291 (437)
Q Consensus 217 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~-v~~l~~~p~~~~~l~s~---~~dg~i~iwd~~~~~~~~~~~~ 291 (437)
.|++||++++. .+..+ .+|.+. +.++.|+|++. ++++| +.|+.|++||+++++.......
T Consensus 199 ~i~iwd~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~-~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~ 263 (402)
T 2aq5_A 199 RVRVIEPRKGT--------------VVAEKDRPHEGTRPVHAVFVSEGK-ILTTGFSRMSERQVALWDTKHLEEPLSLQE 263 (402)
T ss_dssp EEEEEETTTTE--------------EEEEEECSSCSSSCCEEEECSTTE-EEEEEECTTCCEEEEEEETTBCSSCSEEEE
T ss_pred cEEEEeCCCCc--------------eeeeeccCCCCCcceEEEEcCCCc-EEEEeccCCCCceEEEEcCccccCCceEEe
Confidence 99999998753 33445 677765 89999999988 78888 7999999999998765222221
Q ss_pred eecccCCceeeeecCCCCccc-ccCCCCcccccccccccccccccchhhhh-hhhhcC--CCccccccCCCCCCcccccc
Q psy4571 292 DSIRSNGGISSTASPTASSTA-SESPTPTNSVHEKNYWQGLVLFDILVCEE-QRQLLG--TEEESSDRHSSDNDTEDLNS 367 (437)
Q Consensus 292 ~~~~~~~~~~~~~s~~g~~l~-s~s~d~~~~~~~~~~~~~i~~wd~~~~~~-~~~~~~--h~~~~~~~~~~~~~~~~~~~ 367 (437)
..+...+..++|+|++.+++ +|+.|+. |++||+.+++. +..+.+ |...+..+.++|++..++..
T Consensus 264 -~~~~~~v~~~~~s~~~~~l~~~g~~dg~-----------i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s~ 331 (402)
T 2aq5_A 264 -LDTSSGVLLPFFDPDTNIVYLCGKGDSS-----------IRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVNK 331 (402)
T ss_dssp -CCCCSSCEEEEEETTTTEEEEEETTCSC-----------EEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGGG
T ss_pred -ccCCCceeEEEEcCCCCEEEEEEcCCCe-----------EEEEEecCCCcceEeecccccCCcccceEEecccccceec
Confidence 12445677889999999886 5667888 89999998875 445544 45889999999999877654
Q ss_pred -----ccccCH
Q psy4571 368 -----IWSMTD 373 (437)
Q Consensus 368 -----~w~~~~ 373 (437)
+|++..
T Consensus 332 ~~~~~~~~l~~ 342 (402)
T 2aq5_A 332 CEIARFYKLHE 342 (402)
T ss_dssp TEEEEEEEEET
T ss_pred ceeEEEEEcCC
Confidence 788754
No 85
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1.1e-30 Score=251.37 Aligned_cols=271 Identities=10% Similarity=0.073 Sum_probs=206.4
Q ss_pred eeEEEEeeCCCcceEEEeeccCceEeeec-----------CCCceeEEEecCCCCeE-EEecCceEEEEEeeecccc---
Q psy4571 36 RFYRLCVAEPFDDAVEERVINEEYKIWKK-----------NTPFLYDLVVNNYVANI-SCILNISILFFEIIFTQNF--- 100 (437)
Q Consensus 36 ~v~~~~~~~~~~~~l~tgs~d~~v~iw~~-----------~~~~~~~~~~~~~~~~i-~~~~~~~i~~~~~~~~~~~--- 100 (437)
.+.++++..+++++|++|+.|+.|++|+. |.+.+..+.|++....+ +++.|+.|++||+...+..
T Consensus 98 ~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~ 177 (420)
T 3vl1_A 98 DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTL 177 (420)
T ss_dssp CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEE
T ss_pred CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEE
Confidence 55555444499999999999999999993 45668888898887766 6778999999997654432
Q ss_pred -ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeecc---CCCCeEEEE--------------------
Q psy4571 101 -PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDA---HTAEVNCLS-------------------- 156 (437)
Q Consensus 101 -~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~---h~~~v~~l~-------------------- 156 (437)
.+...|.+++|+| ++.+|++|+.||.|++||+. ..+.+..+.. |...|.+++
T Consensus 178 ~~h~~~v~~~~~~~-~~~~l~s~~~d~~v~iwd~~---~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~ 253 (420)
T 3vl1_A 178 IGHRATVTDIAIID-RGRNVLSASLDGTIRLWECG---TGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNL 253 (420)
T ss_dssp ECCSSCEEEEEEET-TTTEEEEEETTSCEEEEETT---TTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTT
T ss_pred cCCCCcEEEEEEcC-CCCEEEEEcCCCcEEEeECC---CCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccce
Confidence 3678899999999 68899999999999999998 4455555553 444555555
Q ss_pred -EeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCC
Q psy4571 157 -FNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDA 235 (437)
Q Consensus 157 -~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~ 235 (437)
|+|++.. |++|+.||.|++||+++++........|...|.+++|+|+++.+|++|+.||.|++||++++...
T Consensus 254 ~~s~~~~~-l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~------ 326 (420)
T 3vl1_A 254 EFGTYGKY-VIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECP------ 326 (420)
T ss_dssp CSSCTTEE-EEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSC------
T ss_pred EEcCCCCE-EEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCc------
Confidence 4678884 99999999999999999776444455688999999999999856999999999999999886431
Q ss_pred CCCCCceEEEecC-ccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeee------eeecccCCceeeeecCCC
Q psy4571 236 EDGPPELLFIHGG-HTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMR------LDSIRSNGGISSTASPTA 308 (437)
Q Consensus 236 ~~~~~~~~~~~~~-h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~------~~~~~~~~~~~~~~s~~g 308 (437)
+..+.+ |...|.++.+ |+++ ++++++.|+.|++||+........+. ....+...+..++|+|++
T Consensus 327 -------~~~~~~~~~~~v~~~~~-~~~~-~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 397 (420)
T 3vl1_A 327 -------VGEFLINEGTPINNVYF-AAGA-LFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDD 397 (420)
T ss_dssp -------SEEEEESTTSCEEEEEE-ETTE-EEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCS
T ss_pred -------hhhhhccCCCCceEEEe-CCCC-EEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCC
Confidence 223444 6778888855 5666 78899999999999998753322111 122345567778999999
Q ss_pred C---cccccCCCCcccccccccccccccccch
Q psy4571 309 S---STASESPTPTNSVHEKNYWQGLVLFDIL 337 (437)
Q Consensus 309 ~---~l~s~s~d~~~~~~~~~~~~~i~~wd~~ 337 (437)
. .+++.+.++. +.+|++.
T Consensus 398 ~~~g~l~a~g~~g~-----------~~~~~~~ 418 (420)
T 3vl1_A 398 ESNGEVLEVGKNNF-----------CALYNLS 418 (420)
T ss_dssp SSSCEEEEEETTTE-----------EEEEESC
T ss_pred CCcceEEEEcCCce-----------EEEEecc
Confidence 9 4555555666 6777764
No 86
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=4.2e-31 Score=246.63 Aligned_cols=264 Identities=15% Similarity=0.166 Sum_probs=205.3
Q ss_pred cccceeEEEEeeCCCcceEEEeeccCceEeeecCCCcee-EEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEE
Q psy4571 32 HSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLY-DLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVA 110 (437)
Q Consensus 32 ~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~-~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~ 110 (437)
-+.-.|.+++|+ |++++|++|+.|+.|++|+..++... ... .....+...|.+++
T Consensus 9 gH~~~v~~~~~~-~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~-----------------------~~~~~~~~~v~~~~ 64 (351)
T 3f3f_A 9 GHDDLVHDVVYD-FYGRHVATCSSDQHIKVFKLDKDTSNWELS-----------------------DSWRAHDSSIVAID 64 (351)
T ss_dssp CCSSCEEEEEEC-SSSSEEEEEETTSEEEEEEECSSSCCEEEE-----------------------EEEECCSSCEEEEE
T ss_pred ccccceeEEEEc-CCCCEEEEeeCCCeEEEEECCCCCCcceec-----------------------ceeccCCCcEEEEE
Confidence 345679999999 99999999999999999997653211 000 00012456889999
Q ss_pred eeCC-CCCEEEEEECCCcEEEEEcCCCCCC------CCeeeeccCCCCeEEEEEeCC--CCcEEEEEeCCCeEEEEeCCC
Q psy4571 111 WHLL-HESLFGSVADDQKLMIWDTRSHNVS------KPSHTVDAHTAEVNCLSFNPY--SEYILATGSADKTVALWDLRN 181 (437)
Q Consensus 111 ~sp~-~~~~l~~~~~dg~v~vwd~~~~~~~------~~~~~~~~h~~~v~~l~~~~~--~~~~l~sgs~dg~i~lwd~~~ 181 (437)
|+|. ++.+|++|+.||.|++||+..+... +.+..+.+|...|.+++|+|+ +. +|++++.||.|++||+++
T Consensus 65 ~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~~~~~dg~v~iwd~~~ 143 (351)
T 3f3f_A 65 WASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGL-KLACLGNDGILRLYDALE 143 (351)
T ss_dssp ECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCS-EEEEEETTCEEEEEECSS
T ss_pred EcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCc-EEEEecCCCcEEEecCCC
Confidence 9995 4789999999999999999854211 346777899999999999999 88 499999999999999987
Q ss_pred CceeeeEe-------------ccCCCceEEEEEcCC---CCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEE
Q psy4571 182 LKLKLHSF-------------ESHKDEIFQVQWSPH---NETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFI 245 (437)
Q Consensus 182 ~~~~~~~~-------------~~h~~~v~~v~~~p~---~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~ 245 (437)
++. +..+ ..|...+.+++|+|+ +. .+++++.|+.+.+|+...... ..+..
T Consensus 144 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~l~~~~~~~~~~~~~~~~~~~------------~~~~~ 209 (351)
T 3f3f_A 144 PSD-LRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPE-KLAVSALEQAIIYQRGKDGKL------------HVAAK 209 (351)
T ss_dssp TTC-TTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCC-EEEEEETTEEEEEEECTTSCE------------EEEEE
T ss_pred hHH-hccccccccccccccccCCcccceeEEEeccCCCCCc-EEEEecCCCcEEEEccCCCce------------eeeee
Confidence 653 2222 257889999999997 66 699999999998887766432 33566
Q ss_pred ecCccccEEEEEEccCCC---eEEEEEeCCCeEEEEeCCCCCCc------------------------------------
Q psy4571 246 HGGHTAKISDFSWNPNEP---WVICSVSEDNIMQEYCDSTDSDT------------------------------------ 286 (437)
Q Consensus 246 ~~~h~~~v~~l~~~p~~~---~~l~s~~~dg~i~iwd~~~~~~~------------------------------------ 286 (437)
+.+|...|++++|+|++. .++++++.||.|++||++.+...
T Consensus 210 ~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (351)
T 3f3f_A 210 LPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAE 289 (351)
T ss_dssp CCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC--------------------------------------
T ss_pred cCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeee
Confidence 789999999999999982 38999999999999999875221
Q ss_pred -------eeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhh
Q psy4571 287 -------KTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQL 345 (437)
Q Consensus 287 -------~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~ 345 (437)
..+.....+...+..++|+|++++|++++.|+. |++||+.+++....+
T Consensus 290 ~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~-----------v~iw~~~~~~~~~~~ 344 (351)
T 3f3f_A 290 LQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGK-----------VRLWKATYSNEFKCM 344 (351)
T ss_dssp -CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSC-----------EEEEEECTTSCEEEE
T ss_pred ecccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCc-----------EEEEecCcCcchhhe
Confidence 122222335566778899999999999999999 899999887655443
No 87
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.2e-31 Score=254.53 Aligned_cols=253 Identities=12% Similarity=0.125 Sum_probs=193.8
Q ss_pred EeeecCCCceeEEEecCCCCeEEE-ecCceEEEEEeeec--cc---c-ccCCCcceEEeeCCCCCEEEEEECCCcEEEEE
Q psy4571 60 KIWKKNTPFLYDLVVNNYVANISC-ILNISILFFEIIFT--QN---F-PFPLSRQDVAWHLLHESLFGSVADDQKLMIWD 132 (437)
Q Consensus 60 ~iw~~~~~~~~~~~~~~~~~~i~~-~~~~~i~~~~~~~~--~~---~-~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd 132 (437)
.++..+.+.+..+.+++....+.+ ..|+.|++||+... +. + .+...|.+++|+| ++.+|++|+.||.|++||
T Consensus 5 ~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~s~d~~v~vwd 83 (377)
T 3dwl_C 5 QVLHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAP-KSNRIVTCSQDRNAYVYE 83 (377)
T ss_dssp EEEEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECT-TTCCEEEEETTSSEEEC-
T ss_pred eeEecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeC-CCCEEEEEeCCCeEEEEE
Confidence 455556678889999998887754 48999999998754 22 1 3567899999999 678999999999999999
Q ss_pred cCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCce--eeeEecc-CCCceEEEEEcCCCCcEE
Q psy4571 133 TRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKL--KLHSFES-HKDEIFQVQWSPHNETIL 209 (437)
Q Consensus 133 ~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~--~~~~~~~-h~~~v~~v~~~p~~~~~l 209 (437)
+.+.........+.+|...|.+++|+|++.. |++|+.|+.|++||+++.+. ....+.. |...|.+++|+|+++ +|
T Consensus 84 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l 161 (377)
T 3dwl_C 84 KRPDGTWKQTLVLLRLNRAATFVRWSPNEDK-FAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNV-LL 161 (377)
T ss_dssp -----CCCCEEECCCCSSCEEEEECCTTSSC-CEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSS-EE
T ss_pred cCCCCceeeeeEecccCCceEEEEECCCCCE-EEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCC-EE
Confidence 9855334467778899999999999999995 99999999999999998652 3556666 999999999999998 59
Q ss_pred EEEeCCCeEEEEEcCCCCCCCCCCCCCC----CCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCC
Q psy4571 210 ASSGTDRRLHVWDLSKIGEEQSTEDAED----GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSD 285 (437)
Q Consensus 210 ~sg~~dg~i~vwd~~~~~~~~~~~~~~~----~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~ 285 (437)
++|+.|+.|++||++............. ...+++..+ +|...|.+++|+|+++ +|++++.||.|++||+++++.
T Consensus 162 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~-~l~~~~~d~~i~iwd~~~~~~ 239 (377)
T 3dwl_C 162 AAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGN-ALAYAGHDSSVTIAYPSAPEQ 239 (377)
T ss_dssp EEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSS-CEEEEETTTEEC-CEECSTTS
T ss_pred EEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCC-EEEEEeCCCcEEEEECCCCCC
Confidence 9999999999999975443222111111 112345556 8999999999999999 788999999999999999887
Q ss_pred ----ceeeeeeecccCCceeeeecCCCCcccccCCCCcc
Q psy4571 286 ----TKTMRLDSIRSNGGISSTASPTASSTASESPTPTN 320 (437)
Q Consensus 286 ----~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~ 320 (437)
+..+.. +...+..++|+|+|+++++++.++.+
T Consensus 240 ~~~~~~~~~~---~~~~v~~~~~s~~~~~l~~~~~~~~~ 275 (377)
T 3dwl_C 240 PPRALITVKL---SQLPLRSLLWANESAIVAAGYNYSPI 275 (377)
T ss_dssp CEEECCCEEC---SSSCEEEEEEEETTEEEEEESSSSEE
T ss_pred cceeeEeecC---CCCceEEEEEcCCCCEEEEEcCCcEE
Confidence 444443 45567788999999999999887763
No 88
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.2e-32 Score=260.89 Aligned_cols=276 Identities=11% Similarity=0.126 Sum_probs=210.2
Q ss_pred eeCCCcceEEEee---cc-CceEee-ecCCCceeEEEecC-CCCeE-EEecCceEEEEEeee---c------cccccCCC
Q psy4571 42 VAEPFDDAVEERV---IN-EEYKIW-KKNTPFLYDLVVNN-YVANI-SCILNISILFFEIIF---T------QNFPFPLS 105 (437)
Q Consensus 42 ~~~~~~~~l~tgs---~d-~~v~iw-~~~~~~~~~~~~~~-~~~~i-~~~~~~~i~~~~~~~---~------~~~~~~~~ 105 (437)
|. |++..+++++ .+ ..+..+ ..|.+.+..+.+++ ....+ +++.|+.|++||+.. . ..+.+...
T Consensus 35 f~-~~~~~~~~~~~w~~~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~ 113 (437)
T 3gre_A 35 FG-PIQEIVRSPNMGNLRGKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSST 113 (437)
T ss_dssp GC-CCCCCCCCCCGGGCCCCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSC
T ss_pred cC-CccccccccccccccceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCC
Confidence 44 6666666553 11 223334 56788999999999 66655 777899999999765 2 22346789
Q ss_pred cceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeec----------c--CCCCeEEEE--EeCCCCcEEEEEeCC
Q psy4571 106 RQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVD----------A--HTAEVNCLS--FNPYSEYILATGSAD 171 (437)
Q Consensus 106 v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~----------~--h~~~v~~l~--~~~~~~~~l~sgs~d 171 (437)
|.+++|+| ++.+|++|+.||.|++||++.....+....+. . +...+.++. +++++. +|++|+.|
T Consensus 114 v~~~~~~~-~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~d 191 (437)
T 3gre_A 114 VTQITMIP-NFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKS-LLVALTNL 191 (437)
T ss_dssp EEEEEECT-TSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCE-EEEEEETT
T ss_pred EEEEEEeC-CCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCC-EEEEEeCC
Confidence 99999999 78899999999999999995211223332222 1 556677777 557787 59999999
Q ss_pred CeEEEEeCCCCceeeeEecc--CCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEec-C
Q psy4571 172 KTVALWDLRNLKLKLHSFES--HKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHG-G 248 (437)
Q Consensus 172 g~i~lwd~~~~~~~~~~~~~--h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~-~ 248 (437)
|.|++||+++++. +..+.. |...|++++|+|+++ +|++|+.||.|++||++.+. .+..+. .
T Consensus 192 ~~i~iwd~~~~~~-~~~~~~~~h~~~v~~~~~s~~~~-~l~s~~~dg~i~iwd~~~~~--------------~~~~~~~~ 255 (437)
T 3gre_A 192 SRVIIFDIRTLER-LQIIENSPRHGAVSSICIDEECC-VLILGTTRGIIDIWDIRFNV--------------LIRSWSFG 255 (437)
T ss_dssp SEEEEEETTTCCE-EEEEECCGGGCCEEEEEECTTSC-EEEEEETTSCEEEEETTTTE--------------EEEEEBCT
T ss_pred CeEEEEeCCCCee-eEEEccCCCCCceEEEEECCCCC-EEEEEcCCCeEEEEEcCCcc--------------EEEEEecC
Confidence 9999999999665 777777 889999999999998 59999999999999998753 334444 7
Q ss_pred ccccEEEEEEcc----CCCeEEEEEeCCCeEEEEeCCCCCCceeeeeee-----------------------cccCCcee
Q psy4571 249 HTAKISDFSWNP----NEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDS-----------------------IRSNGGIS 301 (437)
Q Consensus 249 h~~~v~~l~~~p----~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-----------------------~~~~~~~~ 301 (437)
|...|.+++|+| ++. ++++|+.||.|++||++++++...+.... .+...+..
T Consensus 256 ~~~~v~~~~~~~~~s~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~ 334 (437)
T 3gre_A 256 DHAPITHVEVCQFYGKNSV-IVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALST 334 (437)
T ss_dssp TCEEEEEEEECTTTCTTEE-EEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCC
T ss_pred CCCceEEEEeccccCCCcc-EEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEE
Confidence 778999997765 455 88999999999999999988776665321 02333556
Q ss_pred eeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCC
Q psy4571 302 STASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTE 349 (437)
Q Consensus 302 ~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~ 349 (437)
++|+ ++.++++|+.|+. |++||+.+++....+.+|.
T Consensus 335 l~~~-~~~~l~s~~~d~~-----------i~~wd~~~~~~~~~~~~~~ 370 (437)
T 3gre_A 335 ISVS-NDKILLTDEATSS-----------IVMFSLNELSSSKAVISPS 370 (437)
T ss_dssp EEEE-TTEEEEEEGGGTE-----------EEEEETTCGGGCEEEECC-
T ss_pred EEEC-CceEEEecCCCCe-----------EEEEECCCcccceEEeccc
Confidence 6788 7789999999998 8999999999988888864
No 89
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.98 E-value=2.5e-30 Score=247.72 Aligned_cols=251 Identities=17% Similarity=0.261 Sum_probs=190.9
Q ss_pred ceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeCC
Q psy4571 35 YRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHLL 114 (437)
Q Consensus 35 ~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp~ 114 (437)
..|.+++|+ |++++|++|+.|+.+++|+..++...... ..+...|.+++|++
T Consensus 135 ~~v~~v~~s-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~--------------------------~~~~~~v~~~~~~~- 186 (401)
T 4aez_A 135 TYVASVKWS-HDGSFLSVGLGNGLVDIYDVESQTKLRTM--------------------------AGHQARVGCLSWNR- 186 (401)
T ss_dssp CCEEEEEEC-TTSSEEEEEETTSCEEEEETTTCCEEEEE--------------------------CCCSSCEEEEEEET-
T ss_pred CCEEEEEEC-CCCCEEEEECCCCeEEEEECcCCeEEEEe--------------------------cCCCCceEEEEECC-
Confidence 345666666 56666666666666666665544332211 13456788999954
Q ss_pred CCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCC
Q psy4571 115 HESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKD 194 (437)
Q Consensus 115 ~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~ 194 (437)
.+|++|+.||.|++||++.. ......+.+|.+.|.+++|+|++.. |++|+.||.|++||+++... ...+..|..
T Consensus 187 --~~l~~~~~dg~i~i~d~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~-l~s~~~d~~v~iwd~~~~~~-~~~~~~~~~ 260 (401)
T 4aez_A 187 --HVLSSGSRSGAIHHHDVRIA--NHQIGTLQGHSSEVCGLAWRSDGLQ-LASGGNDNVVQIWDARSSIP-KFTKTNHNA 260 (401)
T ss_dssp --TEEEEEETTSEEEEEETTSS--SCEEEEEECCSSCEEEEEECTTSSE-EEEEETTSCEEEEETTCSSE-EEEECCCSS
T ss_pred --CEEEEEcCCCCEEEEecccC--cceeeEEcCCCCCeeEEEEcCCCCE-EEEEeCCCeEEEccCCCCCc-cEEecCCcc
Confidence 69999999999999999842 3567788899999999999999984 99999999999999998554 777888999
Q ss_pred ceEEEEEcCCCCcEEEEEe--CCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEE--Ee
Q psy4571 195 EIFQVQWSPHNETILASSG--TDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICS--VS 270 (437)
Q Consensus 195 ~v~~v~~~p~~~~~l~sg~--~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s--~~ 270 (437)
.|.+++|+|++..++++|+ .|+.|++||++++.. +..+ .+...|.+++|+|+++ .+++ |+
T Consensus 261 ~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~--------------~~~~-~~~~~v~~~~~s~~~~-~l~~~~g~ 324 (401)
T 4aez_A 261 AVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGAR--------------VNTV-DAGSQVTSLIWSPHSK-EIMSTHGF 324 (401)
T ss_dssp CCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCE--------------EEEE-ECSSCEEEEEECSSSS-EEEEEECT
T ss_pred eEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCE--------------EEEE-eCCCcEEEEEECCCCC-eEEEEeec
Confidence 9999999999888888876 799999999987643 2334 3567899999999999 5556 44
Q ss_pred CCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcC
Q psy4571 271 EDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLG 347 (437)
Q Consensus 271 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~ 347 (437)
.||.|++||+.+++........ .+...+..++|+|+|.++++++.|+. +++||+.+++.+.....
T Consensus 325 ~dg~i~v~~~~~~~~~~~~~~~-~h~~~v~~~~~s~dg~~l~s~~~dg~-----------i~iw~~~~~~~~~~~~~ 389 (401)
T 4aez_A 325 PDNNLSIWSYSSSGLTKQVDIP-AHDTRVLYSALSPDGRILSTAASDEN-----------LKFWRVYDGDHVKRPIP 389 (401)
T ss_dssp TTCEEEEEEEETTEEEEEEEEE-CCSSCCCEEEECTTSSEEEEECTTSE-----------EEEEECCC---------
T ss_pred CCCcEEEEecCCccceeEEEec-CCCCCEEEEEECCCCCEEEEEeCCCc-----------EEEEECCCCcccccccc
Confidence 8999999999987655544332 35567788899999999999999998 89999999988766543
No 90
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.98 E-value=4.1e-32 Score=251.57 Aligned_cols=245 Identities=20% Similarity=0.234 Sum_probs=192.6
Q ss_pred ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCC--CCcEEEEEeCCCeEEEEe
Q psy4571 101 PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPY--SEYILATGSADKTVALWD 178 (437)
Q Consensus 101 ~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~--~~~~l~sgs~dg~i~lwd 178 (437)
.|...|++++|+| ++.+|++|+.|++|++||+.++. ...+..+.+|.++|.+++|+|+ +. +|++|+.|++|++||
T Consensus 11 ~H~~~V~~v~~s~-~g~~lasgs~D~~v~lwd~~~~~-~~~~~~l~gH~~~V~~v~~~~~~~~~-~l~s~s~D~~v~iWd 87 (316)
T 3bg1_A 11 SHEDMIHDAQMDY-YGTRLATCSSDRSVKIFDVRNGG-QILIADLRGHEGPVWQVAWAHPMYGN-ILASCSYDRKVIIWR 87 (316)
T ss_dssp ---CCEEEEEECG-GGCEEEEEETTTEEEEEEEETTE-EEEEEEEECCSSCEEEEEECCGGGSS-CEEEEETTSCEEEEC
T ss_pred cccCeEEEeeEcC-CCCEEEEEeCCCeEEEEEecCCC-cEEEEEEcCCCccEEEEEeCCCCCCC-EEEEEECCCEEEEEE
Confidence 4667899999999 68899999999999999997431 1346778899999999999863 66 499999999999999
Q ss_pred CCCCc-eeeeEeccCCCceEEEEEcCC--CCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEE
Q psy4571 179 LRNLK-LKLHSFESHKDEIFQVQWSPH--NETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISD 255 (437)
Q Consensus 179 ~~~~~-~~~~~~~~h~~~v~~v~~~p~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 255 (437)
++++. .+...+.+|...|.+++|+|+ +. +|++|+.|+.|++||++..... .....+.+|...|.+
T Consensus 88 ~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~-~lasgs~D~~i~lwd~~~~~~~-----------~~~~~~~~h~~~v~~ 155 (316)
T 3bg1_A 88 EENGTWEKSHEHAGHDSSVNSVCWAPHDYGL-ILACGSSDGAISLLTYTGEGQW-----------EVKKINNAHTIGCNA 155 (316)
T ss_dssp CSSSCCCEEEEECCCSSCCCEEEECCTTTCS-CEEEECSSSCEEEEEECSSSCE-----------EECCBTTSSSSCBCC
T ss_pred CCCCcceEEEEccCCCCceEEEEECCCCCCc-EEEEEcCCCCEEEEecCCCCCc-----------ceeeeeccccCCcce
Confidence 99754 335677889999999999998 65 5999999999999999875311 112235688899999
Q ss_pred EEEccCC-----------------CeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCC----Cccccc
Q psy4571 256 FSWNPNE-----------------PWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTA----SSTASE 314 (437)
Q Consensus 256 l~~~p~~-----------------~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g----~~l~s~ 314 (437)
++|+|++ . +|++|+.|+.|++||++.............|...+..++|+|++ .+|+++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~-~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~ 234 (316)
T 3bg1_A 156 VSWAPAVVPGSLIDHPSGQKPNYIK-RFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASC 234 (316)
T ss_dssp CEECCCCCC------CCSCCCCCCC-BEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEE
T ss_pred EEEccccCCccccccccccCccccc-eEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEE
Confidence 9999973 4 78899999999999997653322222223355667888999997 789999
Q ss_pred CCCCcccccccccccccccccchhhh----hhhhhcCCCccccccCCCCCCcccccc-------ccccC
Q psy4571 315 SPTPTNSVHEKNYWQGLVLFDILVCE----EQRQLLGTEEESSDRHSSDNDTEDLNS-------IWSMT 372 (437)
Q Consensus 315 s~d~~~~~~~~~~~~~i~~wd~~~~~----~~~~~~~h~~~~~~~~~~~~~~~~~~~-------~w~~~ 372 (437)
+.|++ +++||+.++. ....+.+|.+.+..+.|+|++..+++. +|+..
T Consensus 235 s~D~~-----------v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 235 SQDGR-----------VFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp ETTCE-----------EEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred cCCCe-----------EEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 99999 7888876631 223457788999999999999887764 78764
No 91
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.98 E-value=1e-30 Score=253.57 Aligned_cols=252 Identities=12% Similarity=0.167 Sum_probs=192.1
Q ss_pred CCceeEEEecCCCCeE-EEecCceEEEEEeeeccc---------------cccC------------CCcceEEeeCCCC-
Q psy4571 66 TPFLYDLVVNNYVANI-SCILNISILFFEIIFTQN---------------FPFP------------LSRQDVAWHLLHE- 116 (437)
Q Consensus 66 ~~~~~~~~~~~~~~~i-~~~~~~~i~~~~~~~~~~---------------~~~~------------~~v~~~~~sp~~~- 116 (437)
.+.+..+.|++.+..+ ++..|+.|++|++..... ..+. ..|.+++|+|+++
T Consensus 28 ~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~ 107 (447)
T 3dw8_B 28 ADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNA 107 (447)
T ss_dssp GGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSS
T ss_pred cCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCc
Confidence 4778999999988877 556799999999764431 1244 7799999999533
Q ss_pred CEEEEEECCCcEEEEEcCCCCCC------------------------------------CCeee-eccCCCCeEEEEEeC
Q psy4571 117 SLFGSVADDQKLMIWDTRSHNVS------------------------------------KPSHT-VDAHTAEVNCLSFNP 159 (437)
Q Consensus 117 ~~l~~~~~dg~v~vwd~~~~~~~------------------------------------~~~~~-~~~h~~~v~~l~~~~ 159 (437)
..|++++.||.|++||+...... .+... ..+|...|.+++|+|
T Consensus 108 ~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 187 (447)
T 3dw8_B 108 AQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINS 187 (447)
T ss_dssp SEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECT
T ss_pred ceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcC
Confidence 78999999999999998742110 00112 368999999999999
Q ss_pred CCCcEEEEEeCCCeEEEEeCCCCceeee-------EeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCC
Q psy4571 160 YSEYILATGSADKTVALWDLRNLKLKLH-------SFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQST 232 (437)
Q Consensus 160 ~~~~~l~sgs~dg~i~lwd~~~~~~~~~-------~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~ 232 (437)
++.. |++| .|+.|++||+++...... .+.+|...|++++|+|++..+|++|+.||.|++||++++.....
T Consensus 188 ~~~~-l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~- 264 (447)
T 3dw8_B 188 DYET-YLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDR- 264 (447)
T ss_dssp TSSE-EEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCT-
T ss_pred CCCE-EEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccc-
Confidence 9995 8888 899999999995444343 35689999999999999834799999999999999998754211
Q ss_pred CCCCCCCCceEEEecCccc------------cEEEEEEccCCCeEEEEEeCCCeEEEEeCCC-CCCceeeeeeecccC--
Q psy4571 233 EDAEDGPPELLFIHGGHTA------------KISDFSWNPNEPWVICSVSEDNIMQEYCDST-DSDTKTMRLDSIRSN-- 297 (437)
Q Consensus 233 ~~~~~~~~~~~~~~~~h~~------------~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~-- 297 (437)
.+..+.+|.. .|.+++|+|+++ +|++++. +.|++||+++ ++++..+..+.....
T Consensus 265 ---------~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l 333 (447)
T 3dw8_B 265 ---------HSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGR-YMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKL 333 (447)
T ss_dssp ---------TCEEECCC-----CCHHHHHTTCEEEEEECTTSS-EEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTH
T ss_pred ---------eeeEeccCCCccccccccccCceEEEEEECCCCC-EEEEeeC-CeEEEEeCCCCccccceeeccccccccc
Confidence 1234555554 899999999999 7878888 9999999997 777777765321111
Q ss_pred ----------CceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhh
Q psy4571 298 ----------GGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQ 342 (437)
Q Consensus 298 ----------~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~ 342 (437)
....++|+|+|.+|++|+.|+. |++||+.+++.+
T Consensus 334 ~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~-----------v~iwd~~~~~~~ 377 (447)
T 3dw8_B 334 CSLYENDCIFDKFECCWNGSDSVVMTGSYNNF-----------FRMFDRNTKRDI 377 (447)
T ss_dssp HHHHHTSGGGCCCCEEECTTSSEEEEECSTTE-----------EEEEETTTCCEE
T ss_pred cccccccccccceEEEECCCCCEEEEeccCCE-----------EEEEEcCCCcce
Confidence 0223799999999999999999 788888887654
No 92
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.98 E-value=4.2e-30 Score=245.79 Aligned_cols=302 Identities=19% Similarity=0.250 Sum_probs=228.2
Q ss_pred ceEeeecCCCceeEEEecC-CCCeE-EEecCceEEEEEeeecccc-----------------ccCCCcceEEeeCCCCCE
Q psy4571 58 EYKIWKKNTPFLYDLVVNN-YVANI-SCILNISILFFEIIFTQNF-----------------PFPLSRQDVAWHLLHESL 118 (437)
Q Consensus 58 ~v~iw~~~~~~~~~~~~~~-~~~~i-~~~~~~~i~~~~~~~~~~~-----------------~~~~~v~~~~~sp~~~~~ 118 (437)
..++...|.+.+..+.+++ ....+ ++..|+.|++||+...... .+...|.+++|+|.++.+
T Consensus 35 ~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 114 (408)
T 4a11_B 35 DRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGM 114 (408)
T ss_dssp TEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTC
T ss_pred ceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcE
Confidence 3455567889999999998 77666 6678999999997654321 267789999999977889
Q ss_pred EEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCc--EEEEEeCCCeEEEEeCCCCceeeeEeccCCCce
Q psy4571 119 FGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEY--ILATGSADKTVALWDLRNLKLKLHSFESHKDEI 196 (437)
Q Consensus 119 l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~--~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v 196 (437)
|++++.||.|++||+. ..+....+. +...+.++.|+|.+.. ++++|+.||.|++||+++++. +..+..|...|
T Consensus 115 l~s~~~d~~i~iwd~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~-~~~~~~~~~~v 189 (408)
T 4a11_B 115 FTSSSFDKTLKVWDTN---TLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSC-SHILQGHRQEI 189 (408)
T ss_dssp EEEEETTSEEEEEETT---TTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCC-CEEECCCCSCE
T ss_pred EEEEeCCCeEEEeeCC---CCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcce-eeeecCCCCcE
Confidence 9999999999999998 444555543 7788999999985431 599999999999999998655 77888999999
Q ss_pred EEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCC--CCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCe
Q psy4571 197 FQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAED--GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 274 (437)
Q Consensus 197 ~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~--~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~ 274 (437)
.+++|+|++++++++|+.||.|++||++............. ..........+|...|.+++|+|+++ ++++++.||.
T Consensus 190 ~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~ 268 (408)
T 4a11_B 190 LAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGL-HLLTVGTDNR 268 (408)
T ss_dssp EEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSS-EEEEEETTSC
T ss_pred EEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCC-EEEEecCCCe
Confidence 99999999987799999999999999988653222111000 01111222467889999999999999 7889999999
Q ss_pred EEEEeCCCCCCceeeeeeec--ccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCCccc
Q psy4571 275 MQEYCDSTDSDTKTMRLDSI--RSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEES 352 (437)
Q Consensus 275 i~iwd~~~~~~~~~~~~~~~--~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~ 352 (437)
|++||+++++.......... .............+..++.++.++. +++||+.+++.+..+.+|...+
T Consensus 269 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------i~v~d~~~~~~~~~~~~~~~~v 337 (408)
T 4a11_B 269 MRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGST-----------IAVYTVYSGEQITMLKGHYKTV 337 (408)
T ss_dssp EEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTE-----------EEEEETTTCCEEEEECCCSSCE
T ss_pred EEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCE-----------EEEEECcCCcceeeeccCCCeE
Confidence 99999999876554432111 1111122222334455555666666 8999999999999999999999
Q ss_pred cccCCCCCCcccccc-------ccccCHHHH
Q psy4571 353 SDRHSSDNDTEDLNS-------IWSMTDEQR 376 (437)
Q Consensus 353 ~~~~~~~~~~~~~~~-------~w~~~~~~~ 376 (437)
..+.++|++..+++. +|++...+.
T Consensus 338 ~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~ 368 (408)
T 4a11_B 338 DCCVFQSNFQELYSGSRDCNILAWVPSLYEP 368 (408)
T ss_dssp EEEEEETTTTEEEEEETTSCEEEEEECC---
T ss_pred EEEEEcCCCCEEEEECCCCeEEEEeCCCCCc
Confidence 999999999877764 899855443
No 93
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.97 E-value=1.1e-31 Score=256.45 Aligned_cols=320 Identities=12% Similarity=0.082 Sum_probs=201.2
Q ss_pred CCcccccceeEEEEeeCCCcceEEEeeccCceEeeecCCCce-------eEEEecCCCCeEEEecCceEEEEEeeecccc
Q psy4571 28 LPLSHSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFL-------YDLVVNNYVANISCILNISILFFEIIFTQNF 100 (437)
Q Consensus 28 ~~~~~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~-------~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~ 100 (437)
.|+...+|.+..+.+. |+...++..+.|+.|++|+...... ....+. +..........|+.......
T Consensus 12 lpl~~~p~~~~w~~~~-~~~~~l~a~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 85 (393)
T 4gq1_A 12 LPLNVRPYTTTWCSQS-PSCSNLLAIGHDTGITIYCASEEQTPGSTGLTLQELFT-----IQTGLPTLHLSFSSSCSYSE 85 (393)
T ss_dssp CCTTCCEEEEEECTTS-GGGTTEEEEEESSEEEEEEEEECCSSSCCSEEEEEEEE-----EECSSCEEEEEECTTCEEEC
T ss_pred ecCCCCCeEEEEeCCC-CCCCCEEEEECCCCEEEEECCCCCcccccccceeeeEE-----EecCCCeeeEeecCCccccc
Confidence 4566667766655555 5555555666788999998432111 000000 00000001111221111111
Q ss_pred ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCC--CCeeeeccCCCCeEEEEEeC--------CCCcEEEEEeC
Q psy4571 101 PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVS--KPSHTVDAHTAEVNCLSFNP--------YSEYILATGSA 170 (437)
Q Consensus 101 ~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~--~~~~~~~~h~~~v~~l~~~~--------~~~~~l~sgs~ 170 (437)
........+.+.|.++.++++|+.|++|++||.+.++.. ..+..+.+|.+.|++++|+| +++ +|++|+.
T Consensus 86 ~~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~-~las~s~ 164 (393)
T 4gq1_A 86 NLHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQ-VIASVGD 164 (393)
T ss_dssp C----------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEE-EEEEEET
T ss_pred cccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCC-EEEEEEC
Confidence 112223333344436789999999999999999843211 23345679999999999998 667 6999999
Q ss_pred CCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCC-----------
Q psy4571 171 DKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGP----------- 239 (437)
Q Consensus 171 dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~----------- 239 (437)
|++|+|||+++... ...+..|..+|.+++|+|++..+|++|+.|++|++||++++.............
T Consensus 165 D~tv~~Wd~~~~~~-~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~ 243 (393)
T 4gq1_A 165 DCTLIIWRLTDEGP-ILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLP 243 (393)
T ss_dssp TSEEEEEEEETTEE-EEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGG
T ss_pred CCeEEEEECCCCce-eeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEeccccc
Confidence 99999999988555 666778999999999999987679999999999999999876544322111110
Q ss_pred CceEEEecCccccEEEEEEc-cCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeec---------------ccCCceeee
Q psy4571 240 PELLFIHGGHTAKISDFSWN-PNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSI---------------RSNGGISST 303 (437)
Q Consensus 240 ~~~~~~~~~h~~~v~~l~~~-p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~---------------~~~~~~~~~ 303 (437)
........+|...+.++.|+ |++. .+++++.|+.+++||+..++....+..... .........
T Consensus 244 ~~~~~~~~~~~~~v~~v~~~~~dg~-~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (393)
T 4gq1_A 244 LVNTCHSSGIASSLANVRWIGSDGS-GILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGAC 322 (393)
T ss_dssp GC------CCSSSCSEEEEETTTTC-EEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCE
T ss_pred ceeeeecccccccceeeeeecCCCC-EEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEE
Confidence 01112345788889999987 7888 788999999999999988765544432110 111122233
Q ss_pred ecC--CCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCCccccccCCCCCCcccccc
Q psy4571 304 ASP--TASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHSSDNDTEDLNS 367 (437)
Q Consensus 304 ~s~--~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~ 367 (437)
++| ++.++++|+.|+. |++||+.+++....+.+|...|..++|+|+|+.++..
T Consensus 323 ~~~~~~~~~~~sgs~Dg~-----------V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~a 377 (393)
T 4gq1_A 323 PHPRYMDYFATAHSQHGL-----------IQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIA 377 (393)
T ss_dssp ECSSCTTEEEEEETTTTE-----------EEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEE
T ss_pred EccCCCCEEEEEECCCCE-----------EEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEE
Confidence 433 4557788888988 8999999999999899999999999999999988765
No 94
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.97 E-value=3.9e-30 Score=244.67 Aligned_cols=257 Identities=14% Similarity=0.166 Sum_probs=188.6
Q ss_pred ccceeEEEEeeCC-CcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEe
Q psy4571 33 SIYRFYRLCVAEP-FDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAW 111 (437)
Q Consensus 33 ~~~~v~~~~~~~~-~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~ 111 (437)
+...|.+++|+ | ++..+++++.|+.+++|+..+..+..+.. ...+...|.+++|
T Consensus 117 h~~~v~~~~~~-~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~------------------------~~~~~~~v~~~~~ 171 (383)
T 3ei3_B 117 PGDAITGMKFN-QFNTNQLFVSSIRGATTLRDFSGSVIQVFAK------------------------TDSWDYWYCCVDV 171 (383)
T ss_dssp TTCBEEEEEEE-TTEEEEEEEEETTTEEEEEETTSCEEEEEEC------------------------CCCSSCCEEEEEE
T ss_pred cCCceeEEEeC-CCCCCEEEEEeCCCEEEEEECCCCceEEEec------------------------cCCCCCCeEEEEE
Confidence 44567778887 6 66788888888888888876433222210 0123467899999
Q ss_pred eCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCc---eeeeE
Q psy4571 112 HLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLK---LKLHS 188 (437)
Q Consensus 112 sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~---~~~~~ 188 (437)
+| ++.+|++|+.||.|++||+. .+.+..+.+|...|.+++|+|+++++|++|+.|+.|++||+++.+ .++..
T Consensus 172 ~~-~~~~l~~~~~d~~i~i~d~~----~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~ 246 (383)
T 3ei3_B 172 SV-SRQMLATGDSTGRLLLLGLD----GHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAE 246 (383)
T ss_dssp ET-TTTEEEEEETTSEEEEEETT----SCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEE
T ss_pred CC-CCCEEEEECCCCCEEEEECC----CCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEE
Confidence 99 68899999999999999995 467788889999999999999998669999999999999999732 22444
Q ss_pred eccCCCceEEEEEcC-CCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCC---CceEEEecCccccEEEEEEccCCCe
Q psy4571 189 FESHKDEIFQVQWSP-HNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGP---PELLFIHGGHTAKISDFSWNPNEPW 264 (437)
Q Consensus 189 ~~~h~~~v~~v~~~p-~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~---~~~~~~~~~h~~~v~~l~~~p~~~~ 264 (437)
+ +|...|.+++|+| ++. +|++++.|+.|++||+++.............. ...+...-.....+..++|+|+++
T Consensus 247 ~-~~~~~v~~~~~s~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~- 323 (383)
T 3ei3_B 247 M-PHEKPVNAAYFNPTDST-KLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQ- 323 (383)
T ss_dssp E-ECSSCEEEEEECTTTSC-EEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTT-
T ss_pred e-cCCCceEEEEEcCCCCC-EEEEEcCCCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCcc-
Confidence 4 6999999999999 888 58999999999999999876654422110000 000000001123556677888887
Q ss_pred EEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceee-eecCCCCcccccCCCCcccccccccccccccccchh
Q psy4571 265 VICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISS-TASPTASSTASESPTPTNSVHEKNYWQGLVLFDILV 338 (437)
Q Consensus 265 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~ 338 (437)
+ +++.|+.|++||+.+++.+..+... .+.+.+.. +|+|+|.+|++++ |+. |++||+.+
T Consensus 324 ~--s~s~d~~i~iwd~~~~~~~~~l~~~--~~~~~~~~~~~s~~g~~l~s~s-d~~-----------i~iw~~~~ 382 (383)
T 3ei3_B 324 L--LLNDKRTIDIYDANSGGLVHQLRDP--NAAGIISLNKFSPTGDVLASGM-GFN-----------ILIWNRED 382 (383)
T ss_dssp T--CTTCCCCEEEEETTTCCEEEEECBT--TBCSCCCEEEECTTSSEEEEEE-TTE-----------EEEEECC-
T ss_pred c--ccCCCCeEEEEecCCCceeeeecCC--CCCceEEEEEEecCccEEEEec-CCc-----------EEEEecCC
Confidence 3 7889999999999999887766532 23444554 9999999999997 787 78888754
No 95
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.97 E-value=1.4e-30 Score=267.18 Aligned_cols=244 Identities=18% Similarity=0.227 Sum_probs=203.0
Q ss_pred ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCC--CCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEe
Q psy4571 101 PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNV--SKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWD 178 (437)
Q Consensus 101 ~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~--~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd 178 (437)
.|...|++++|+|+++.+|++|+.||+|++||+..... ......+.+|...|.+++|+|++.. |++|+.||+|++||
T Consensus 380 ~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~-l~sgs~Dg~v~vwd 458 (694)
T 3dm0_A 380 AHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQF-ALSGSWDGELRLWD 458 (694)
T ss_dssp CCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSE-EEEEETTSEEEEEE
T ss_pred cCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCE-EEEEeCCCcEEEEE
Confidence 47789999999997788999999999999999975432 2234678899999999999999995 99999999999999
Q ss_pred CCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEE
Q psy4571 179 LRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 258 (437)
Q Consensus 179 ~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~ 258 (437)
+.++.. ...+.+|...|.+++|+|+++. |++|+.|++|++||+....... ......+|...|.+++|
T Consensus 459 ~~~~~~-~~~~~~h~~~v~~~~~s~~~~~-l~s~s~D~~i~iwd~~~~~~~~-----------~~~~~~~h~~~v~~~~~ 525 (694)
T 3dm0_A 459 LAAGVS-TRRFVGHTKDVLSVAFSLDNRQ-IVSASRDRTIKLWNTLGECKYT-----------ISEGGEGHRDWVSCVRF 525 (694)
T ss_dssp TTTTEE-EEEEECCSSCEEEEEECTTSSC-EEEEETTSCEEEECTTSCEEEE-----------ECSSTTSCSSCEEEEEE
T ss_pred CCCCcc-eeEEeCCCCCEEEEEEeCCCCE-EEEEeCCCEEEEEECCCCccee-----------eccCCCCCCCcEEEEEE
Confidence 998655 7788899999999999999985 8999999999999986532110 00112578899999999
Q ss_pred ccCCC-eEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccch
Q psy4571 259 NPNEP-WVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDIL 337 (437)
Q Consensus 259 ~p~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~ 337 (437)
+|++. ..+++++.|+.|++||+++++....+.. |...+..++|+|+|+++++|+.|+. |++||+.
T Consensus 526 ~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~---h~~~v~~v~~spdg~~l~sg~~Dg~-----------i~iwd~~ 591 (694)
T 3dm0_A 526 SPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAG---HTGYVSTVAVSPDGSLCASGGKDGV-----------VLLWDLA 591 (694)
T ss_dssp CSCSSSCEEEEEETTSCEEEEETTTCCEEEEECC---CSSCEEEEEECTTSSEEEEEETTSB-----------CEEEETT
T ss_pred eCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcC---CCCCEEEEEEeCCCCEEEEEeCCCe-----------EEEEECC
Confidence 99873 3789999999999999998876665543 5566778899999999999999999 8999999
Q ss_pred hhhhhhhhcCCCccccccCCCCCCcccccc------ccccCH
Q psy4571 338 VCEEQRQLLGTEEESSDRHSSDNDTEDLNS------IWSMTD 373 (437)
Q Consensus 338 ~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~------~w~~~~ 373 (437)
+++.+..+..+. .+..+.++|++..++.. +|++..
T Consensus 592 ~~~~~~~~~~~~-~v~~~~~sp~~~~l~~~~~~~i~iwd~~~ 632 (694)
T 3dm0_A 592 EGKKLYSLEANS-VIHALCFSPNRYWLCAATEHGIKIWDLES 632 (694)
T ss_dssp TTEEEECCBCSS-CEEEEEECSSSSEEEEEETTEEEEEETTT
T ss_pred CCceEEEecCCC-cEEEEEEcCCCcEEEEEcCCCEEEEECCC
Confidence 999888877654 68889999998776653 888754
No 96
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.97 E-value=1.6e-29 Score=244.86 Aligned_cols=264 Identities=17% Similarity=0.260 Sum_probs=202.2
Q ss_pred ceeEEEEeeCCCcceEEEeeccCceEeeecCC-----------CceeEEEecCCCCeEEEecCceEEEEEeeecccc---
Q psy4571 35 YRFYRLCVAEPFDDAVEERVINEEYKIWKKNT-----------PFLYDLVVNNYVANISCILNISILFFEIIFTQNF--- 100 (437)
Q Consensus 35 ~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~-----------~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~--- 100 (437)
-.|+++.| +++.+++|+.|++|++|+..+ +.+..+.+ .....+++..|+.|++||+..++..
T Consensus 134 ~~v~~~~~---d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~-~~~~l~sg~~dg~i~vwd~~~~~~~~~~ 209 (435)
T 1p22_A 134 KGVYCLQY---DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY-DERVIITGSSDSTVRVWDVNTGEMLNTL 209 (435)
T ss_dssp CCEEEEEC---CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC-CSSEEEEEETTSCEEEEESSSCCEEEEE
T ss_pred CcEEEEEE---CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE-CCCEEEEEcCCCeEEEEECCCCcEEEEE
Confidence 45666665 588999999999999999544 44555555 2223346778999999998755432
Q ss_pred -ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeC
Q psy4571 101 -PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDL 179 (437)
Q Consensus 101 -~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~ 179 (437)
.+...|.+++|++ +.+++|+.||.|++||+.+.........+.+|...|.+++| ++. .+++|+.||.|++||+
T Consensus 210 ~~h~~~v~~l~~~~---~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~-~l~s~~~dg~i~vwd~ 283 (435)
T 1p22_A 210 IHHCEAVLHLRFNN---GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDK-YIVSASGDRTIKVWNT 283 (435)
T ss_dssp CCCCSCEEEEECCT---TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETT-EEEEEETTSEEEEEET
T ss_pred cCCCCcEEEEEEcC---CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCC-EEEEEeCCCeEEEEEC
Confidence 3567899999975 58999999999999999854333333677899999999999 466 4999999999999999
Q ss_pred CCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEc
Q psy4571 180 RNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWN 259 (437)
Q Consensus 180 ~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~ 259 (437)
++++. +..+.+|...|.+++++ ++ .+++|+.||.|++||++++. .+..+.+|...|.+++|
T Consensus 284 ~~~~~-~~~~~~~~~~v~~~~~~--~~-~l~~g~~dg~i~iwd~~~~~--------------~~~~~~~h~~~v~~~~~- 344 (435)
T 1p22_A 284 STCEF-VRTLNGHKRGIACLQYR--DR-LVVSGSSDNTIRLWDIECGA--------------CLRVLEGHEELVRCIRF- 344 (435)
T ss_dssp TTCCE-EEEEECCSSCEEEEEEE--TT-EEEEEETTSCEEEEETTTCC--------------EEEEECCCSSCEEEEEC-
T ss_pred CcCcE-EEEEcCCCCcEEEEEeC--CC-EEEEEeCCCeEEEEECCCCC--------------EEEEEeCCcCcEEEEEe-
Confidence 99665 88888999999999995 44 69999999999999998863 45568899999999999
Q ss_pred cCCCeEEEEEeCCCeEEEEeCCCCC---------CceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccc
Q psy4571 260 PNEPWVICSVSEDNIMQEYCDSTDS---------DTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQG 330 (437)
Q Consensus 260 p~~~~~l~s~~~dg~i~iwd~~~~~---------~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~ 330 (437)
++. .+++|+.||.|++||++++. +...+ ..+...+..++| ++..+++++.|+.
T Consensus 345 -~~~-~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~---~~h~~~v~~l~~--~~~~l~s~s~Dg~----------- 406 (435)
T 1p22_A 345 -DNK-RIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTL---VEHSGRVFRLQF--DEFQIVSSSHDDT----------- 406 (435)
T ss_dssp -CSS-EEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEE---CCCSSCCCCEEE--CSSCEEECCSSSE-----------
T ss_pred -cCC-EEEEEeCCCcEEEEECCCCCCccccccchheeec---cCCCCCeEEEEe--CCCEEEEEeCCCE-----------
Confidence 566 78999999999999997665 22332 234455666666 8899999999999
Q ss_pred cccccchhhhhhhhh
Q psy4571 331 LVLFDILVCEEQRQL 345 (437)
Q Consensus 331 i~~wd~~~~~~~~~~ 345 (437)
|++||+.++......
T Consensus 407 i~iwd~~~~~~~~~~ 421 (435)
T 1p22_A 407 ILIWDFLNDPAAQAE 421 (435)
T ss_dssp EEEEC----------
T ss_pred EEEEECCCCCCcccC
Confidence 899999887654433
No 97
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.3e-30 Score=244.40 Aligned_cols=245 Identities=11% Similarity=0.036 Sum_probs=183.2
Q ss_pred cceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeC
Q psy4571 34 IYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHL 113 (437)
Q Consensus 34 ~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp 113 (437)
++.....++. +++.++++|+.|++|++|+..++....... ...|.++.|+|
T Consensus 36 ~~~~~~~~~~-~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~----------------------------~~~v~~~~~~~ 86 (343)
T 3lrv_A 36 PYKELNKSMY-YDKWVCMCRCEDGALHFTQLKDSKTITTIT----------------------------TPNPRTGGEHP 86 (343)
T ss_dssp CEEEECSSSS-EEEEEEEEEEETTEEEEEEESSSSCEEEEE----------------------------EECCCTTCCCC
T ss_pred Chhhhhhhhc-CCCCEEEEECCCCcEEEEECCCCcEEEEEe----------------------------cCCceeeeeCC
Confidence 3444444455 678899999999999999987766543321 13566788888
Q ss_pred CCCCEEEEEECCCcEEEEEcCCC------CCCCCeeeec-cCCCCeEEEEEeC--CCCcEEEEEeCCCeEEEEeCCCCce
Q psy4571 114 LHESLFGSVADDQKLMIWDTRSH------NVSKPSHTVD-AHTAEVNCLSFNP--YSEYILATGSADKTVALWDLRNLKL 184 (437)
Q Consensus 114 ~~~~~l~~~~~dg~v~vwd~~~~------~~~~~~~~~~-~h~~~v~~l~~~~--~~~~~l~sgs~dg~i~lwd~~~~~~ 184 (437)
. +++++.|++|++|+.... ...+.+.... +|.++|.+++|+| ++.+ +++|+.||+|++||+++++.
T Consensus 87 ~----~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-l~s~s~dg~i~~wd~~~~~~ 161 (343)
T 3lrv_A 87 A----IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEY-FIWADNRGTIGFQSYEDDSQ 161 (343)
T ss_dssp S----EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCE-EEEEETTCCEEEEESSSSCE
T ss_pred c----eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCE-EEEEeCCCcEEEEECCCCcE
Confidence 3 889999999999977621 1223233333 6778999999999 9985 99999999999999998665
Q ss_pred eeeEe-ccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecC-ccccEEEEEEccCC
Q psy4571 185 KLHSF-ESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGG-HTAKISDFSWNPNE 262 (437)
Q Consensus 185 ~~~~~-~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~l~~~p~~ 262 (437)
.... ..|...+.+++|+|++. +|++|+.||.|++||++++.... ..+.+ |...|++++|+|++
T Consensus 162 -~~~~~~~~~~~i~~~~~~pdg~-~lasg~~dg~i~iwd~~~~~~~~-------------~~~~~~h~~~v~~l~fs~~g 226 (343)
T 3lrv_A 162 -YIVHSAKSDVEYSSGVLHKDSL-LLALYSPDGILDVYNLSSPDQAS-------------SRFPVDEEAKIKEVKFADNG 226 (343)
T ss_dssp -EEEECCCSSCCCCEEEECTTSC-EEEEECTTSCEEEEESSCTTSCC-------------EECCCCTTSCEEEEEECTTS
T ss_pred -EEEEecCCCCceEEEEECCCCC-EEEEEcCCCEEEEEECCCCCCCc-------------cEEeccCCCCEEEEEEeCCC
Confidence 4444 34566899999999998 69999999999999999875431 23556 99999999999999
Q ss_pred CeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCc--eeeeecCCCCcccccCC-CCcccccccccccccccccchhh
Q psy4571 263 PWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGG--ISSTASPTASSTASESP-TPTNSVHEKNYWQGLVLFDILVC 339 (437)
Q Consensus 263 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~--~~~~~s~~g~~l~s~s~-d~~~~~~~~~~~~~i~~wd~~~~ 339 (437)
. +|++++ |+.|++||+++++....+.....+.... ..++|+|+|+++++++. ++. +++|++..+
T Consensus 227 ~-~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~-----------i~v~~~~~~ 293 (343)
T 3lrv_A 227 Y-WMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNS-----------LTIYKFDKK 293 (343)
T ss_dssp S-EEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTE-----------EEEEEECTT
T ss_pred C-EEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecCCCCc-----------EEEEEEccc
Confidence 9 777888 5599999999987766554311111111 35899999999999877 777 677777554
Q ss_pred h
Q psy4571 340 E 340 (437)
Q Consensus 340 ~ 340 (437)
.
T Consensus 294 ~ 294 (343)
T 3lrv_A 294 T 294 (343)
T ss_dssp T
T ss_pred c
Confidence 3
No 98
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.97 E-value=4.2e-30 Score=248.49 Aligned_cols=253 Identities=19% Similarity=0.274 Sum_probs=206.2
Q ss_pred cccccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCC-------CCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeC
Q psy4571 98 QNFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSH-------NVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSA 170 (437)
Q Consensus 98 ~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~-------~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~ 170 (437)
..+.+...|++++|+|+++.+|++++.||.|++||+... .....+..+.+|...|.+++|+|++..+|++|+.
T Consensus 123 ~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~ 202 (430)
T 2xyi_A 123 IKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASD 202 (430)
T ss_dssp EEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECT
T ss_pred EEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeC
Confidence 345678899999999965789999999999999999841 1256778888999999999999998856999999
Q ss_pred CCeEEEEeCCCCce------eeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEE
Q psy4571 171 DKTVALWDLRNLKL------KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLF 244 (437)
Q Consensus 171 dg~i~lwd~~~~~~------~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~ 244 (437)
||.|++||+.+... +...+..|...|.+++|+|++..+|++++.||.|++||++..... ..+.
T Consensus 203 dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~-----------~~~~ 271 (430)
T 2xyi_A 203 DHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTS-----------KPSH 271 (430)
T ss_dssp TSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSS-----------SCSE
T ss_pred CCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCC-----------ccee
Confidence 99999999987332 134567899999999999966668999999999999999976321 2234
Q ss_pred EecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCC-CCceeeeeeecccCCceeeeecCCCC-cccccCCCCcccc
Q psy4571 245 IHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTD-SDTKTMRLDSIRSNGGISSTASPTAS-STASESPTPTNSV 322 (437)
Q Consensus 245 ~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~s~~g~-~l~s~s~d~~~~~ 322 (437)
.+..|...|++++|+|++++++++|+.||.|++||+++. .++..+.. +...+..++|+|++. ++++++.|+.
T Consensus 272 ~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~---h~~~v~~i~~sp~~~~~l~s~~~d~~--- 345 (430)
T 2xyi_A 272 TVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFES---HKDEIFQVQWSPHNETILASSGTDRR--- 345 (430)
T ss_dssp EEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEC---CSSCEEEEEECSSCTTEEEEEETTSC---
T ss_pred EeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeec---CCCCEEEEEECCCCCCEEEEEeCCCc---
Confidence 567899999999999999888999999999999999984 44555443 556778889999996 5889999988
Q ss_pred cccccccccccccchh--------------hhhhhhhcCCCccccccCCCCCCc-ccccc-------ccccCHHH
Q psy4571 323 HEKNYWQGLVLFDILV--------------CEEQRQLLGTEEESSDRHSSDNDT-EDLNS-------IWSMTDEQ 375 (437)
Q Consensus 323 ~~~~~~~~i~~wd~~~--------------~~~~~~~~~h~~~~~~~~~~~~~~-~~~~~-------~w~~~~~~ 375 (437)
|++||+.. .+.+..+.+|...+..+.++|++. .+++. +|++....
T Consensus 346 --------i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~~ 412 (430)
T 2xyi_A 346 --------LHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAENV 412 (430)
T ss_dssp --------CEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHHH
T ss_pred --------EEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEccccc
Confidence 78888877 245566689999999999999998 44332 88886543
No 99
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.97 E-value=6.4e-29 Score=239.43 Aligned_cols=269 Identities=19% Similarity=0.304 Sum_probs=205.8
Q ss_pred cceeEEecCCcc--------cccceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEE
Q psy4571 20 NAFFTWSALPLS--------HSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILF 91 (437)
Q Consensus 20 ~~~~~~~~~~~~--------~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~ 91 (437)
+.+++|+...-. .+...|.+++|+ |++++|++|+.|++|++|+..++.......
T Consensus 125 ~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fs-pdg~~lasgs~Dg~v~iWd~~~~~~~~~~~----------------- 186 (420)
T 4gga_A 125 NSVYLWSASSGDILQLLQMEQPGEYISSVAWI-KEGNYLAVGTSSAEVQLWDVQQQKRLRNMT----------------- 186 (420)
T ss_dssp TEEEEEETTTCCEEEEEECCSTTCCEEEEEEC-TTSSEEEEEETTSCEEEEETTTTEEEEEEC-----------------
T ss_pred CEEEEEECCCCCEEEEEEecCCCCcEEEEEEC-CCCCEEEEEECCCeEEEEEcCCCcEEEEEe-----------------
Confidence 456677655322 223458899998 899999999999999999987766543321
Q ss_pred EEeeeccccccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCC
Q psy4571 92 FEIIFTQNFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSAD 171 (437)
Q Consensus 92 ~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~d 171 (437)
.+...+.+++|+ +.+|++|+.|+.+++||.... ...+..+.+|...+..+.|+|++.. +++++.|
T Consensus 187 ---------~h~~~v~~~s~~---~~~l~sgs~d~~i~~~d~~~~--~~~~~~~~~h~~~~~~~~~~~~g~~-l~s~~~D 251 (420)
T 4gga_A 187 ---------SHSARVGSLSWN---SYILSSGSRSGHIHHHDVRVA--EHHVATLSGHSQEVCGLRWAPDGRH-LASGGND 251 (420)
T ss_dssp ---------CCSSCEEEEEEE---TTEEEEEETTSEEEEEETTSS--SCEEEEEECCSSCEEEEEECTTSSE-EEEEETT
T ss_pred ---------CCCCceEEEeeC---CCEEEEEeCCCceeEeeeccc--ceeeEEecccccceeeeeecCCCCe-eeeeecc
Confidence 123455666665 468999999999999998853 3566788899999999999999995 9999999
Q ss_pred CeEEEEeCCCCce---eeeEeccCCCceEEEEEcCCCCcEEEEE--eCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEe
Q psy4571 172 KTVALWDLRNLKL---KLHSFESHKDEIFQVQWSPHNETILASS--GTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIH 246 (437)
Q Consensus 172 g~i~lwd~~~~~~---~~~~~~~h~~~v~~v~~~p~~~~~l~sg--~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 246 (437)
+.+++|+..+++. .+.....|...|.+++|+|.+..+++++ +.|+.|++||+.++.. +..+
T Consensus 252 ~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~--------------~~~~ 317 (420)
T 4gga_A 252 NLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGAC--------------LSAV 317 (420)
T ss_dssp SCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEE--------------EEEE
T ss_pred ccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCcccc--------------ceee
Confidence 9999999987543 3456778999999999999988877764 4799999999988643 3334
Q ss_pred cCccccEEEEEEccCCCeEEEEE-eCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCccccccc
Q psy4571 247 GGHTAKISDFSWNPNEPWVICSV-SEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEK 325 (437)
Q Consensus 247 ~~h~~~v~~l~~~p~~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~ 325 (437)
..| ..+.++.|+|+++.+++++ +.|+.|++||+.+++++..+.. |...+..++|+|+|++|++|+.|++
T Consensus 318 ~~~-~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~g---H~~~V~~l~~spdg~~l~S~s~D~t------ 387 (420)
T 4gga_A 318 DAH-SQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKG---HTSRVLSLTMSPDGATVASAAADET------ 387 (420)
T ss_dssp ECS-SCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECC---CSSCEEEEEECTTSSCEEEEETTTE------
T ss_pred ccc-cceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcC---CCCCEEEEEEcCCCCEEEEEecCCe------
Confidence 444 5789999999999555433 3799999999999988877754 5667888899999999999999999
Q ss_pred ccccccccccchhhhhhhhhcCCCc
Q psy4571 326 NYWQGLVLFDILVCEEQRQLLGTEE 350 (437)
Q Consensus 326 ~~~~~i~~wd~~~~~~~~~~~~h~~ 350 (437)
|++||+......+....+..
T Consensus 388 -----vriWdv~~~~~~~~~~~~~~ 407 (420)
T 4gga_A 388 -----LRLWRCFELDPARRREREKA 407 (420)
T ss_dssp -----EEEECCSCSSCC--------
T ss_pred -----EEEEECCCCCccchhhhccC
Confidence 89999877666555554443
No 100
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.97 E-value=3.7e-29 Score=261.04 Aligned_cols=298 Identities=14% Similarity=0.118 Sum_probs=232.1
Q ss_pred cccceeEEEEeeCCCcceEEEeeccCceEeeecC-----------CCceeEEEecCCCCeE-EEecCceEEEEEeeeccc
Q psy4571 32 HSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKN-----------TPFLYDLVVNNYVANI-SCILNISILFFEIIFTQN 99 (437)
Q Consensus 32 ~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~-----------~~~~~~~~~~~~~~~i-~~~~~~~i~~~~~~~~~~ 99 (437)
.+...|.+++|+ |+++.|++|+.|+.|++|+.. .+.+..+.|++....+ ++..|+.|++|++.....
T Consensus 53 ~~~~~v~~~~~s-~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~ 131 (814)
T 3mkq_A 53 VTETPVRAGKFI-ARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWA 131 (814)
T ss_dssp CCSSCEEEEEEE-GGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSE
T ss_pred cCCCcEEEEEEe-CCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCce
Confidence 345679999999 999999999999999999943 4557788888888766 667889999999765421
Q ss_pred -----cccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeecc-CCCCeEEEEEeC--CCCcEEEEEeCC
Q psy4571 100 -----FPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDA-HTAEVNCLSFNP--YSEYILATGSAD 171 (437)
Q Consensus 100 -----~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~-h~~~v~~l~~~~--~~~~~l~sgs~d 171 (437)
..+...|.+++|+|.++..|++++.||.|++||+.. ......+.. +...+.+++|+| ++.. |++|+.|
T Consensus 132 ~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~~~-l~~~~~d 207 (814)
T 3mkq_A 132 LEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQ---STPNFTLTTGQERGVNYVDYYPLPDKPY-MITASDD 207 (814)
T ss_dssp EEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTC---SSCSEEEECCCTTCCCEEEECCSTTCCE-EEEECTT
T ss_pred EEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCC---CcceeEEecCCCCCEEEEEEEECCCCCE-EEEEeCC
Confidence 235678999999996678999999999999999984 344444444 448899999999 8884 9999999
Q ss_pred CeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccc
Q psy4571 172 KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTA 251 (437)
Q Consensus 172 g~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 251 (437)
|.|++||+++++. +..+.+|...|.+++|+|+++ ++++|+.||.|++||+.++. .+..+..|..
T Consensus 208 g~i~~~d~~~~~~-~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~v~vwd~~~~~--------------~~~~~~~~~~ 271 (814)
T 3mkq_A 208 LTIKIWDYQTKSC-VATLEGHMSNVSFAVFHPTLP-IIISGSEDGTLKIWNSSTYK--------------VEKTLNVGLE 271 (814)
T ss_dssp SEEEEEETTTTEE-EEEEECCSSCEEEEEECSSSS-EEEEEETTSCEEEEETTTCS--------------EEEEECCSSS
T ss_pred CEEEEEECCCCcE-EEEEcCCCCCEEEEEEcCCCC-EEEEEeCCCeEEEEECCCCc--------------EEEEeecCCC
Confidence 9999999998654 778889999999999999998 59999999999999998753 3455778889
Q ss_pred cEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeee----------------------------------------
Q psy4571 252 KISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRL---------------------------------------- 291 (437)
Q Consensus 252 ~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~---------------------------------------- 291 (437)
.+.+++|+|++..++++++.|+.+.+|++........+..
T Consensus 272 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (814)
T 3mkq_A 272 RSWCIATHPTGRKNYIASGFDNGFTVLSLGNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLSLQTKE 351 (814)
T ss_dssp SEEEEEECTTCGGGEEEEEETTEEEEEECSCCSCCEEECSSSEEEEECCTTSCTTCEEEEECCSCCCCCSSSCBCCCCEE
T ss_pred cEEEEEEccCCCceEEEEEeCCCEEEEEcCCCCceeEECCCCCEEEECcccccceeeeeeecccccccccCccceeeeec
Confidence 9999999999976545666677899999876543222210
Q ss_pred eecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCCccccccCCCCCCcccccc
Q psy4571 292 DSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHSSDNDTEDLNS 367 (437)
Q Consensus 292 ~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~ 367 (437)
...+...+..++|+|+|+++++++ ++. +.+|++.... ..+...+..+.++|+|..++..
T Consensus 352 ~~~~~~~~~~~~~spdg~~la~~~-~~~-----------~~i~~~~~~~-----~~~~~~i~~~~~spdg~~la~~ 410 (814)
T 3mkq_A 352 LGSVDVFPQSLAHSPNGRFVTVVG-DGE-----------YVIYTALAWR-----NKAFGKCQDFVWGPDSNSYALI 410 (814)
T ss_dssp ECCCSSCCSEEEECTTSSEEEEEE-TTE-----------EEEEETTTTE-----EEEEEECSEEEECTTSSCEEEE
T ss_pred CCCCccCCceeEECCCCCEEEEec-CCE-----------EEEEECcccc-----ccCCCceEEEEEeCCCCeEEEE
Confidence 001122345679999999999988 666 6777754322 2234567788899988876653
No 101
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.97 E-value=2.2e-29 Score=237.14 Aligned_cols=278 Identities=14% Similarity=0.093 Sum_probs=211.8
Q ss_pred cccccceeEEEEeeCCC---cceEEEeeccCceEeeecCC-CceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCC
Q psy4571 30 LSHSIYRFYRLCVAEPF---DDAVEERVINEEYKIWKKNT-PFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLS 105 (437)
Q Consensus 30 ~~~~~~~v~~~~~~~~~---~~~l~tgs~d~~v~iw~~~~-~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~ 105 (437)
+.-+.-.|.+++|+ |+ +++|++|+.|+.|++|+..+ +......+ ..+...
T Consensus 35 ~~~h~~~v~~~~~~-~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~-------------------------~~h~~~ 88 (368)
T 3mmy_A 35 TSSPDDSIGCLSFS-PPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQ-------------------------QMHTGP 88 (368)
T ss_dssp SSCCSSCEEEEEEC-CTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEE-------------------------EECSSC
T ss_pred ccCCCCceEEEEEc-CCCCCceEEEEECCCCcEEEEEcCCCCceeEEEe-------------------------ccccCC
Confidence 44556778999999 77 58999999999999999765 33221111 124567
Q ss_pred cceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEE--eCCCCcEEEEEeCCCeEEEEeCCCCc
Q psy4571 106 RQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSF--NPYSEYILATGSADKTVALWDLRNLK 183 (437)
Q Consensus 106 v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~~~~l~sgs~dg~i~lwd~~~~~ 183 (437)
|.+++|+| ++.+|++|+.||.|++||+.+ .+. ..+..|...|.+++| +|++. +|++++.||.|++||+++++
T Consensus 89 v~~~~~~~-~~~~l~s~~~dg~v~iwd~~~---~~~-~~~~~~~~~v~~~~~~~~~~~~-~l~~~~~dg~i~vwd~~~~~ 162 (368)
T 3mmy_A 89 VLDVCWSD-DGSKVFTASCDKTAKMWDLSS---NQA-IQIAQHDAPVKTIHWIKAPNYS-CVMTGSWDKTLKFWDTRSSN 162 (368)
T ss_dssp EEEEEECT-TSSEEEEEETTSEEEEEETTT---TEE-EEEEECSSCEEEEEEEECSSCE-EEEEEETTSEEEEECSSCSS
T ss_pred EEEEEECc-CCCEEEEEcCCCcEEEEEcCC---CCc-eeeccccCceEEEEEEeCCCCC-EEEEccCCCcEEEEECCCCc
Confidence 89999999 788999999999999999983 333 346679999999999 88888 49999999999999999866
Q ss_pred eeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCC
Q psy4571 184 LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEP 263 (437)
Q Consensus 184 ~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~ 263 (437)
. +..+..+ ..+.++.+.++ .+++++.|+.+++|+++....... .....+...+.++.+.++..
T Consensus 163 ~-~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~i~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~ 225 (368)
T 3mmy_A 163 P-MMVLQLP-ERCYCADVIYP---MAVVATAERGLIVYQLENQPSEFR------------RIESPLKHQHRCVAIFKDKQ 225 (368)
T ss_dssp C-SEEEECS-SCEEEEEEETT---EEEEEEGGGCEEEEECSSSCEEEE------------ECCCSCSSCEEEEEEEECTT
T ss_pred E-EEEEecC-CCceEEEecCC---eeEEEeCCCcEEEEEeccccchhh------------hccccccCCCceEEEcccCC
Confidence 4 6666655 46777777653 477888899999999987542211 11223334455666655443
Q ss_pred ---eEEEEEeCCCeEEEEeCCCCCC---ceeeeeeec---------ccCCceeeeecCCCCcccccCCCCcccccccccc
Q psy4571 264 ---WVICSVSEDNIMQEYCDSTDSD---TKTMRLDSI---------RSNGGISSTASPTASSTASESPTPTNSVHEKNYW 328 (437)
Q Consensus 264 ---~~l~s~~~dg~i~iwd~~~~~~---~~~~~~~~~---------~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~ 328 (437)
..+++++.||.|++||++.... ...+..... +...+..++|+|+++++++++.|+.
T Consensus 226 ~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~--------- 296 (368)
T 3mmy_A 226 NKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGR--------- 296 (368)
T ss_dssp SCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSC---------
T ss_pred CCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCe---------
Confidence 2388999999999999998743 333332211 0014777899999999999999998
Q ss_pred cccccccchhhhhhhhhcCCCccccccCCCCCCcccccc
Q psy4571 329 QGLVLFDILVCEEQRQLLGTEEESSDRHSSDNDTEDLNS 367 (437)
Q Consensus 329 ~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~ 367 (437)
|++||+.+++.+..+.+|...+..+.++|+|..++..
T Consensus 297 --i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~ 333 (368)
T 3mmy_A 297 --FSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYA 333 (368)
T ss_dssp --EEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEE
T ss_pred --EEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEE
Confidence 8999999999999999999999999999999887765
No 102
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2e-29 Score=260.39 Aligned_cols=255 Identities=14% Similarity=0.207 Sum_probs=199.8
Q ss_pred ccccceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEE
Q psy4571 31 SHSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVA 110 (437)
Q Consensus 31 ~~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~ 110 (437)
.-+.-.|.+++|+ |+++++++|+.|++|++|+..++...... ....+...|.+++
T Consensus 6 ~gH~~~V~~l~~s-~dg~~latg~~dg~I~vwd~~~~~~~~~~------------------------~l~~h~~~V~~l~ 60 (753)
T 3jro_A 6 NAHNELIHDAVLD-YYGKRLATCSSDKTIKIFEVEGETHKLID------------------------TLTGHEGPVWRVD 60 (753)
T ss_dssp --CCCCEEEECCC-SSSCCEEEEETTTEEEEEEEETTEEEEEE------------------------EECCCSSCEEEEE
T ss_pred ccCcceeEEEEEC-CCCCeEEEEECCCcEEEEecCCCCCccce------------------------eccCCcCceEEEE
Confidence 4456679999999 99999999999999999997633211110 0112457899999
Q ss_pred eeCCC-CCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCC--CCcEEEEEeCCCeEEEEeCCCCc-eee
Q psy4571 111 WHLLH-ESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPY--SEYILATGSADKTVALWDLRNLK-LKL 186 (437)
Q Consensus 111 ~sp~~-~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~--~~~~l~sgs~dg~i~lwd~~~~~-~~~ 186 (437)
|+|+. +.+|++|+.||.|++||+.++. ......+.+|...|.+++|+|+ +. ++++|+.||.|++||+++.. ...
T Consensus 61 ~s~~~~~~~l~s~s~Dg~I~vwd~~~~~-~~~~~~~~~h~~~V~~v~~sp~~~~~-~l~sgs~dg~I~vwdl~~~~~~~~ 138 (753)
T 3jro_A 61 WAHPKFGTILASCSYDGKVLIWKEENGR-WSQIAVHAVHSASVNSVQWAPHEYGP-LLLVASSDGKVSVVEFKENGTTSP 138 (753)
T ss_dssp ECCTTSCSEEEEEETTSCEEEEEEETTE-EEEEEEECCCSSCEEEEEECCGGGCS-EEEEEETTSEEEEEECCSSSCCCC
T ss_pred ecCCCCCCEEEEEeCCCeEEEEECCCCc-ccccccccCCCCCeEEEEECCCCCCC-EEEEEeCCCcEEEEEeecCCCcce
Confidence 99832 7899999999999999998431 2266777899999999999999 77 59999999999999999863 224
Q ss_pred eEeccCCCceEEEEEcCC-------------CCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccE
Q psy4571 187 HSFESHKDEIFQVQWSPH-------------NETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKI 253 (437)
Q Consensus 187 ~~~~~h~~~v~~v~~~p~-------------~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 253 (437)
..+.+|...|.+++|+|. +. .+++|+.||.|++||++..... ......+.+|...|
T Consensus 139 ~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~-~l~sgs~dg~I~iwd~~~~~~~----------~~~~~~~~~h~~~V 207 (753)
T 3jro_A 139 IIIDAHAIGVNSASWAPATIEEDGEHNGTKESR-KFVTGGADNLVKIWKYNSDAQT----------YVLESTLEGHSDWV 207 (753)
T ss_dssp EEEECCSSCEEEEEECCCC---------CGGGC-CEEEEETTSCEEEEEEETTTTE----------EEEEEEECCCSSCE
T ss_pred eEeecCCCceEEEEecCcccccccccccCCCCC-EEEEEECCCeEEEEeccCCccc----------ceeeeeecCCCCcE
Confidence 566789999999999994 66 5899999999999999875422 13456678999999
Q ss_pred EEEEEccC---CCeEEEEEeCCCeEEEEeCCCCCCcee--eeeeecccCCceeeeecCCCCcccccCCCCcccccc
Q psy4571 254 SDFSWNPN---EPWVICSVSEDNIMQEYCDSTDSDTKT--MRLDSIRSNGGISSTASPTASSTASESPTPTNSVHE 324 (437)
Q Consensus 254 ~~l~~~p~---~~~~l~s~~~dg~i~iwd~~~~~~~~~--~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~ 324 (437)
++++|+|+ +. ++++++.||.|++||++++..... ......+...+..++|+|+|.++++++.|+.+.+|+
T Consensus 208 ~~l~~sp~~~~~~-~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd 282 (753)
T 3jro_A 208 RDVAWSPTVLLRS-YLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWK 282 (753)
T ss_dssp EEEEECCCCSSSE-EEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCB
T ss_pred EEEEeccCCCCCC-EEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEe
Confidence 99999999 66 899999999999999998743221 112222455667789999999999999999944443
No 103
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.97 E-value=1.1e-28 Score=232.45 Aligned_cols=271 Identities=11% Similarity=0.086 Sum_probs=196.1
Q ss_pred ccccceeEEEEeeCCCcceEEEeeccCceEeeecCCCc---------eeEEEecCCCCeE--EEecCceEEEEEeeecc-
Q psy4571 31 SHSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPF---------LYDLVVNNYVANI--SCILNISILFFEIIFTQ- 98 (437)
Q Consensus 31 ~~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~---------~~~~~~~~~~~~i--~~~~~~~i~~~~~~~~~- 98 (437)
..+...|.+++|+ |+++++++|+.|+ +++|+.+... +..+.+.+....+ +...++.|++||...++
T Consensus 16 ~~h~~~V~~v~fs-~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~ 93 (355)
T 3vu4_A 16 NHVSNPVTDYEFN-QDQSCLILSTLKS-FEIYNVHPVAHIMSQEMRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQD 93 (355)
T ss_dssp ---CCCCCEEEEC-TTSSEEEEECSSE-EEEEEETTEEEEEEEECSCCCEEEECTTSSEEEEECSSTTEEEEEETTTTEE
T ss_pred ccCCCceEEEEEC-CCCCEEEEEcCCE-EEEEecCCcceeeeeecCCeEEEEEcCCCCEEEEEECCccEEEEEECCCCcE
Confidence 4567789999999 9999999998775 7899965432 2233344444544 34566799999976543
Q ss_pred --ccccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEE--EeCCCeE
Q psy4571 99 --NFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILAT--GSADKTV 174 (437)
Q Consensus 99 --~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s--gs~dg~i 174 (437)
.+.++..|.+++|+++ .++++ .|+.|++||+.+. .+.+..+.. +...+++++ .. ++. |+.||.|
T Consensus 94 ~~~~~~~~~v~~v~~~~~---~~~~~-~~~~i~i~d~~~~--~~~~~~~~~---~~~~~~~s~--~~-la~~sg~~~g~v 161 (355)
T 3vu4_A 94 VSRIKVDAPVKDLFLSRE---FIVVS-YGDVISVFKFGNP--WKRITDDIR---FGGVCEFSN--GL-LVYSNEFNLGQI 161 (355)
T ss_dssp EEEEECSSCEEEEEECSS---EEEEE-ETTEEEEEESSTT--CCBSSCCEE---EEEEEEEET--TE-EEEEESSCTTCE
T ss_pred EEEEECCCceEEEEEcCC---EEEEE-EcCEEEEEECCCC--ceeeEEecc---CCceEEEEc--cE-EEEeCCCcCcEE
Confidence 3456779999999882 34444 3789999999853 133444433 455566777 43 554 6899999
Q ss_pred EEEeCCCCc--------------ee-eeEeccCCCceEEEEEcCCCCcEEEEEeCCCe-EEEEEcCCCCCCCCCCCCCCC
Q psy4571 175 ALWDLRNLK--------------LK-LHSFESHKDEIFQVQWSPHNETILASSGTDRR-LHVWDLSKIGEEQSTEDAEDG 238 (437)
Q Consensus 175 ~lwd~~~~~--------------~~-~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~-i~vwd~~~~~~~~~~~~~~~~ 238 (437)
++||+++++ .+ +..+.+|.++|++++|+|+++ +|++|+.|++ |++||+++++.
T Consensus 162 ~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~-~l~s~s~d~~~v~iwd~~~~~~---------- 230 (355)
T 3vu4_A 162 HITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSD-MVATCSQDGTIIRVFKTEDGVL---------- 230 (355)
T ss_dssp EEEECCC------------------CCEEECCCSSCEEEEEECTTSS-EEEEEETTCSEEEEEETTTCCE----------
T ss_pred EEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCC-EEEEEeCCCCEEEEEECCCCcE----------
Confidence 999999754 12 667889999999999999998 5999999998 99999998643
Q ss_pred CCceEEEec-C-ccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeee--------------------eeeccc
Q psy4571 239 PPELLFIHG-G-HTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMR--------------------LDSIRS 296 (437)
Q Consensus 239 ~~~~~~~~~-~-h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~--------------------~~~~~~ 296 (437)
+..+. + |...|.+++|+|+++ +|++++.|++|++||++.+...+... ......
T Consensus 231 ----~~~~~~g~h~~~v~~~~~s~~~~-~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (355)
T 3vu4_A 231 ----VREFRRGLDRADVVDMKWSTDGS-KLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKH 305 (355)
T ss_dssp ----EEEEECTTCCSCEEEEEECTTSC-EEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTT
T ss_pred ----EEEEEcCCCCCcEEEEEECCCCC-EEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCC
Confidence 44465 5 999999999999999 78899999999999998764322111 100011
Q ss_pred CCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhh
Q psy4571 297 NGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQ 342 (437)
Q Consensus 297 ~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~ 342 (437)
.....++|+++|+.+++++.|+. +++|++..++..
T Consensus 306 ~~~~~~a~~~d~~~l~~~~~dg~-----------~~~~~~~~~~~~ 340 (355)
T 3vu4_A 306 VRGCKIAWISESSLVVVWPHTRM-----------IETFKVVFDDEM 340 (355)
T ss_dssp CCCCEEEESSSSEEEEEETTTTE-----------EEEEEEEEETTT
T ss_pred CCceEEEEeCCCCEEEEEeCCCe-----------EEEEEEEcCCCC
Confidence 11255789999999999999998 788887766543
No 104
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.4e-29 Score=239.67 Aligned_cols=244 Identities=19% Similarity=0.227 Sum_probs=200.9
Q ss_pred ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCC--CCcEEEEEeCCCeEEEEe
Q psy4571 101 PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPY--SEYILATGSADKTVALWD 178 (437)
Q Consensus 101 ~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~--~~~~l~sgs~dg~i~lwd 178 (437)
.|...|.+++|+| ++.+|++|+.||.|++||+... ..+.+..+.+|...|.+++|+|+ +. +|++|+.||.|++||
T Consensus 9 ~h~~~v~~~~~s~-~~~~l~~~~~dg~i~iw~~~~~-~~~~~~~~~~h~~~v~~~~~~~~~~~~-~l~s~~~dg~v~iwd 85 (379)
T 3jrp_A 9 AHNELIHDAVLDY-YGKRLATCSSDKTIKIFEVEGE-THKLIDTLTGHEGPVWRVDWAHPKFGT-ILASCSYDGKVLIWK 85 (379)
T ss_dssp ECCCCEEEEEECS-SSSEEEEEETTSCEEEEEEETT-EEEEEEEECCCSSCEEEEEECCGGGCS-EEEEEETTSCEEEEE
T ss_pred CCcccEEEEEEcC-CCCEEEEEECCCcEEEEecCCC-cceeeeEecCCCCcEEEEEeCCCCCCC-EEEEeccCCEEEEEE
Confidence 3667899999999 6889999999999999999743 24566788899999999999977 77 599999999999999
Q ss_pred CCCCce-eeeEeccCCCceEEEEEcCC--CCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEE
Q psy4571 179 LRNLKL-KLHSFESHKDEIFQVQWSPH--NETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISD 255 (437)
Q Consensus 179 ~~~~~~-~~~~~~~h~~~v~~v~~~p~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 255 (437)
+++++. ....+..|...|.+++|+|+ +. ++++++.|+.|++||++...... ...+.+|...|.+
T Consensus 86 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~~~~~d~~i~v~d~~~~~~~~------------~~~~~~~~~~v~~ 152 (379)
T 3jrp_A 86 EENGRWSQIAVHAVHSASVNSVQWAPHEYGP-LLLVASSDGKVSVVEFKENGTTS------------PIIIDAHAIGVNS 152 (379)
T ss_dssp EETTEEEEEEEECCCSSCEEEEEECCGGGCS-EEEEEETTSEEEEEECCTTSCCC------------EEEEECCTTCEEE
T ss_pred cCCCceeEeeeecCCCcceEEEEeCCCCCCC-EEEEecCCCcEEEEecCCCCcee------------eEEecCCCCceEE
Confidence 998652 36677889999999999999 77 69999999999999998764322 2456789999999
Q ss_pred EEEcc-------------CCCeEEEEEeCCCeEEEEeCCCCCCceeee-eeecccCCceeeeecCC---CCcccccCCCC
Q psy4571 256 FSWNP-------------NEPWVICSVSEDNIMQEYCDSTDSDTKTMR-LDSIRSNGGISSTASPT---ASSTASESPTP 318 (437)
Q Consensus 256 l~~~p-------------~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~s~~---g~~l~s~s~d~ 318 (437)
++|+| ++. ++++++.||.|++||++++....... ....+...+..++|+|+ +.++++++.|+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg 231 (379)
T 3jrp_A 153 ASWAPATIEEDGEHNGTKESR-KFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDR 231 (379)
T ss_dssp EEECCCC----------CTTC-EEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTS
T ss_pred EEEcCccccccccccCCCCCC-EEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCC
Confidence 99999 577 88999999999999999876543332 22234566778899999 89999999999
Q ss_pred cccccccccccccccccchhhh-----hhhhhcCCCccccccCCCCCCcccccc-------ccccC
Q psy4571 319 TNSVHEKNYWQGLVLFDILVCE-----EQRQLLGTEEESSDRHSSDNDTEDLNS-------IWSMT 372 (437)
Q Consensus 319 ~~~~~~~~~~~~i~~wd~~~~~-----~~~~~~~h~~~~~~~~~~~~~~~~~~~-------~w~~~ 372 (437)
. +++||+.+++ ......+|...+..+.++|+|..++.. +|++.
T Consensus 232 ~-----------i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~ 286 (379)
T 3jrp_A 232 T-----------CIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 286 (379)
T ss_dssp C-----------EEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEE
T ss_pred E-----------EEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCC
Confidence 8 8999998864 233345688899999999999887754 78875
No 105
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.97 E-value=1.9e-29 Score=235.43 Aligned_cols=267 Identities=16% Similarity=0.149 Sum_probs=201.0
Q ss_pred ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCC-CCeeeeccCCCCeEEEEEeC--CCCcEEEEEeCCCeEEEE
Q psy4571 101 PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVS-KPSHTVDAHTAEVNCLSFNP--YSEYILATGSADKTVALW 177 (437)
Q Consensus 101 ~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~-~~~~~~~~h~~~v~~l~~~~--~~~~~l~sgs~dg~i~lw 177 (437)
.|...|++++|+| ++.+|++|+.||.|++||+.+.... +....+.+|...|.+++|+| ++. +|++|+.||.|++|
T Consensus 9 gH~~~v~~~~~~~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~-~l~s~~~dg~v~vw 86 (351)
T 3f3f_A 9 GHDDLVHDVVYDF-YGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGR-IIASASYDKTVKLW 86 (351)
T ss_dssp CCSSCEEEEEECS-SSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCS-EEEEEETTSCEEEE
T ss_pred ccccceeEEEEcC-CCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCC-EEEEEcCCCeEEEE
Confidence 3677899999999 7889999999999999999853211 35667789999999999999 577 59999999999999
Q ss_pred eCCCCc--------eeeeEeccCCCceEEEEEcCC--CCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEec
Q psy4571 178 DLRNLK--------LKLHSFESHKDEIFQVQWSPH--NETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHG 247 (437)
Q Consensus 178 d~~~~~--------~~~~~~~~h~~~v~~v~~~p~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (437)
|++++. .+...+..|...|.+++|+|+ +. ++++++.||.|++||+++.............. .......
T Consensus 87 d~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~-~~~~~~~ 164 (351)
T 3f3f_A 87 EEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGL-KLACLGNDGILRLYDALEPSDLRSWTLTSEMK-VLSIPPA 164 (351)
T ss_dssp EECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCS-EEEEEETTCEEEEEECSSTTCTTCCEEEEEEE-SCSCCCS
T ss_pred ecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCc-EEEEecCCCcEEEecCCChHHhcccccccccc-ccccccC
Confidence 998753 346678889999999999999 87 59999999999999999876554421100000 0001123
Q ss_pred CccccEEEEEEccC---CCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCC----CcccccCCCCcc
Q psy4571 248 GHTAKISDFSWNPN---EPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTA----SSTASESPTPTN 320 (437)
Q Consensus 248 ~h~~~v~~l~~~p~---~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g----~~l~s~s~d~~~ 320 (437)
+|...+.+++|+|+ +. ++++++.|+.+.+|+...++... ......+...+..++|+|++ .++++++.|+.+
T Consensus 165 ~~~~~~~~~~~~p~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i 242 (351)
T 3f3f_A 165 NHLQSDFCLSWCPSRFSPE-KLAVSALEQAIIYQRGKDGKLHV-AAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRI 242 (351)
T ss_dssp SCSCCCEEEEECCCSSSCC-EEEEEETTEEEEEEECTTSCEEE-EEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCE
T ss_pred CcccceeEEEeccCCCCCc-EEEEecCCCcEEEEccCCCceee-eeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeE
Confidence 67889999999997 66 88899999999888887765422 22222355677888999998 899999999995
Q ss_pred cccccccc-----------------------------------cccccccchhhhhhhhhcCCCccccccCCCCCCcccc
Q psy4571 321 SVHEKNYW-----------------------------------QGLVLFDILVCEEQRQLLGTEEESSDRHSSDNDTEDL 365 (437)
Q Consensus 321 ~~~~~~~~-----------------------------------~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~ 365 (437)
++|+.... ..+.+|+...++.+..+.+|...+..+.++|++..++
T Consensus 243 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~ 322 (351)
T 3f3f_A 243 RIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILS 322 (351)
T ss_dssp EEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEE
T ss_pred EEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEE
Confidence 44433221 0122333333467777899999999999999998777
Q ss_pred cc-------ccccCH
Q psy4571 366 NS-------IWSMTD 373 (437)
Q Consensus 366 ~~-------~w~~~~ 373 (437)
+. +|++..
T Consensus 323 s~~~dg~v~iw~~~~ 337 (351)
T 3f3f_A 323 SAGDDGKVRLWKATY 337 (351)
T ss_dssp EEETTSCEEEEEECT
T ss_pred EecCCCcEEEEecCc
Confidence 64 888854
No 106
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=7.5e-28 Score=234.11 Aligned_cols=273 Identities=12% Similarity=0.095 Sum_probs=200.2
Q ss_pred ceeEEEEeeCCCcceEEEeeccCceEeeecCCCc----------------------------------------------
Q psy4571 35 YRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPF---------------------------------------------- 68 (437)
Q Consensus 35 ~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~---------------------------------------------- 68 (437)
..+.+++|+ +++++++++ .++.|++|+..++.
T Consensus 5 ~p~~~v~~s-~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (450)
T 2vdu_B 5 HPLQNLLTS-RDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGD 82 (450)
T ss_dssp CCCCEEEEC-SSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC----------------------------------
T ss_pred ccEEEEEec-CCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCc
Confidence 356778899 999866655 57889999965443
Q ss_pred ----------------------eeEEEecCCCCeE--EEecCceEEEEEee--ecccc------ccCCCcceEEeeCCCC
Q psy4571 69 ----------------------LYDLVVNNYVANI--SCILNISILFFEII--FTQNF------PFPLSRQDVAWHLLHE 116 (437)
Q Consensus 69 ----------------------~~~~~~~~~~~~i--~~~~~~~i~~~~~~--~~~~~------~~~~~v~~~~~sp~~~ 116 (437)
+..+.|++....+ ++..|+.|++||+. .+... .++..|.+++|+| ++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp-~~ 161 (450)
T 2vdu_B 83 SIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAE-DD 161 (450)
T ss_dssp -----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECT-TS
T ss_pred cccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcC-CC
Confidence 6778888888875 45578999999987 43322 3467899999999 68
Q ss_pred CEEEEEECCCcEEEEEcCCCCCCC-CeeeeccCCCCeEEEEEeCC---CCcEEEEEeCCCeEEEEeCCCCceeeeE-ecc
Q psy4571 117 SLFGSVADDQKLMIWDTRSHNVSK-PSHTVDAHTAEVNCLSFNPY---SEYILATGSADKTVALWDLRNLKLKLHS-FES 191 (437)
Q Consensus 117 ~~l~~~~~dg~v~vwd~~~~~~~~-~~~~~~~h~~~v~~l~~~~~---~~~~l~sgs~dg~i~lwd~~~~~~~~~~-~~~ 191 (437)
.+|++|+.+|.|++|++.+..... ....+.+|...|.+++|+|+ +. +|++|+.|+.|++||+++++. +.. +.+
T Consensus 162 ~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~-~l~s~~~d~~i~vwd~~~~~~-~~~~~~~ 239 (450)
T 2vdu_B 162 TTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQ-FIITSDRDEHIKISHYPQCFI-VDKWLFG 239 (450)
T ss_dssp SEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCE-EEEEEETTSCEEEEEESCTTC-EEEECCC
T ss_pred CEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCc-EEEEEcCCCcEEEEECCCCce-eeeeecC
Confidence 899999999999999998554333 44477789999999999999 77 599999999999999998765 444 668
Q ss_pred CCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCC----------CCCCce-EEEecCccccEEEEEEcc
Q psy4571 192 HKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAE----------DGPPEL-LFIHGGHTAKISDFSWNP 260 (437)
Q Consensus 192 h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~----------~~~~~~-~~~~~~h~~~v~~l~~~p 260 (437)
|...|.+++|+ +++ +|++|+.|+.|++||+++++......... ..+... ..........|.+++|+|
T Consensus 240 h~~~v~~~~~s-d~~-~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~ 317 (450)
T 2vdu_B 240 HKHFVSSICCG-KDY-LLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSK 317 (450)
T ss_dssp CSSCEEEEEEC-STT-EEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECS
T ss_pred CCCceEEEEEC-CCC-EEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeC
Confidence 99999999999 887 59999999999999999876433321000 000000 000012345799999999
Q ss_pred CCCeEEEEEe-CCCeEEEEeC--CCCCCceeeeeeecccCCceeeeecCCCCcccccCC
Q psy4571 261 NEPWVICSVS-EDNIMQEYCD--STDSDTKTMRLDSIRSNGGISSTASPTASSTASESP 316 (437)
Q Consensus 261 ~~~~~l~s~~-~dg~i~iwd~--~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~ 316 (437)
+++ ++++++ .|+.|++|++ .++..+........+ ..+..++|+|++.+++.++.
T Consensus 318 ~~~-~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~~ 374 (450)
T 2vdu_B 318 NLP-FVAFFVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHNDEFQVTLDNK 374 (450)
T ss_dssp SSS-EEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETTEEEEEECCT
T ss_pred CCC-EEEEEECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecCCcEEEEEecc
Confidence 999 566666 8999999999 555333333222222 56778899997666665554
No 107
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.97 E-value=9.7e-29 Score=241.17 Aligned_cols=271 Identities=17% Similarity=0.190 Sum_probs=211.4
Q ss_pred eeecCCCce-eEEEecCCCCeEEEecCceEEEEEeeecccc----ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCC
Q psy4571 61 IWKKNTPFL-YDLVVNNYVANISCILNISILFFEIIFTQNF----PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRS 135 (437)
Q Consensus 61 iw~~~~~~~-~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~----~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~ 135 (437)
....|.+.+ ..+.+. ....++++.|+.|++||+...+.. .+...|.+++|+|+ + +|++|+.||+|++||++
T Consensus 116 ~l~~h~~~v~~~~~~~-~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~-~-~l~s~s~dg~i~vwd~~- 191 (464)
T 3v7d_B 116 TLRGHMTSVITCLQFE-DNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHG-G-ILVSGSTDRTVRVWDIK- 191 (464)
T ss_dssp EEECCSSSCEEEEEEE-TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECST-T-EEEEEETTSCEEEEETT-
T ss_pred EEcCCCCCcEEEEEEC-CCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCC-C-EEEEEeCCCCEEEEECC-
Confidence 344455443 333332 233447789999999997655432 36789999999983 4 99999999999999998
Q ss_pred CCCCCCeeeeccCCCCeEEEEEeC--CCCcEEEEEeCCCeEEEEeCCCCcee----------------------eeEecc
Q psy4571 136 HNVSKPSHTVDAHTAEVNCLSFNP--YSEYILATGSADKTVALWDLRNLKLK----------------------LHSFES 191 (437)
Q Consensus 136 ~~~~~~~~~~~~h~~~v~~l~~~~--~~~~~l~sgs~dg~i~lwd~~~~~~~----------------------~~~~~~ 191 (437)
..+.+..+.+|.+.|.+++|++ ++. .+++|+.||+|++||+++.... ...+.+
T Consensus 192 --~~~~~~~~~~h~~~v~~l~~~~~~~~~-~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (464)
T 3v7d_B 192 --KGCCTHVFEGHNSTVRCLDIVEYKNIK-YIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRG 268 (464)
T ss_dssp --TTEEEEEECCCSSCEEEEEEEESSSCE-EEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECC
T ss_pred --CCcEEEEECCCCCccEEEEEecCCCCC-EEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccC
Confidence 5567888899999999999994 566 5999999999999999875431 445678
Q ss_pred CCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeC
Q psy4571 192 HKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSE 271 (437)
Q Consensus 192 h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~ 271 (437)
|...|.++ +++++ .+++|+.|+.|++||+++. +.+..+.+|...|.+++|+|+++ .+++|+.
T Consensus 269 ~~~~v~~~--~~~~~-~l~~~~~d~~i~vwd~~~~--------------~~~~~~~~~~~~v~~~~~~~~~~-~l~sg~~ 330 (464)
T 3v7d_B 269 HMASVRTV--SGHGN-IVVSGSYDNTLIVWDVAQM--------------KCLYILSGHTDRIYSTIYDHERK-RCISASM 330 (464)
T ss_dssp CSSCEEEE--EEETT-EEEEEETTSCEEEEETTTT--------------EEEEEECCCSSCEEEEEEETTTT-EEEEEET
T ss_pred ccceEEEE--cCCCC-EEEEEeCCCeEEEEECCCC--------------cEEEEecCCCCCEEEEEEcCCCC-EEEEEeC
Confidence 88888887 46676 5999999999999999875 44566889999999999999999 7889999
Q ss_pred CCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCCcc
Q psy4571 272 DNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEE 351 (437)
Q Consensus 272 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~ 351 (437)
||.|++||+++++++..+.. +...+..+.++ +.++++++.|+. +++||+.+++..... .|...
T Consensus 331 dg~i~vwd~~~~~~~~~~~~---h~~~v~~~~~~--~~~l~s~s~dg~-----------v~vwd~~~~~~~~~~-~~~~~ 393 (464)
T 3v7d_B 331 DTTIRIWDLENGELMYTLQG---HTALVGLLRLS--DKFLVSAAADGS-----------IRGWDANDYSRKFSY-HHTNL 393 (464)
T ss_dssp TSCEEEEETTTTEEEEEECC---CSSCEEEEEEC--SSEEEEEETTSE-----------EEEEETTTCCEEEEE-ECTTC
T ss_pred CCcEEEEECCCCcEEEEEeC---CCCcEEEEEEc--CCEEEEEeCCCc-----------EEEEECCCCceeeee-cCCCC
Confidence 99999999999887766653 44555555665 689999999998 899999887655444 34556
Q ss_pred ccccCCCCCCcccccc------ccccCH
Q psy4571 352 SSDRHSSDNDTEDLNS------IWSMTD 373 (437)
Q Consensus 352 ~~~~~~~~~~~~~~~~------~w~~~~ 373 (437)
+....+++++..++.+ +|++..
T Consensus 394 ~~~~~~~~~~~~l~~~~dg~i~iwd~~~ 421 (464)
T 3v7d_B 394 SAITTFYVSDNILVSGSENQFNIYNLRS 421 (464)
T ss_dssp CCEEEEEECSSEEEEEETTEEEEEETTT
T ss_pred ccEEEEEeCCCEEEEecCCeEEEEECCC
Confidence 6677788888766654 888744
No 108
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=7.1e-29 Score=241.32 Aligned_cols=263 Identities=12% Similarity=0.093 Sum_probs=206.8
Q ss_pred eeEEEecCCCCeEEEecCceEEEEEeeecc---cc---------------------------------------------
Q psy4571 69 LYDLVVNNYVANISCILNISILFFEIIFTQ---NF--------------------------------------------- 100 (437)
Q Consensus 69 ~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~---~~--------------------------------------------- 100 (437)
+..+.+++.+..+.+..++.|.+||+..++ .+
T Consensus 7 ~~~v~~s~dg~~l~~~~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (450)
T 2vdu_B 7 LQNLLTSRDGSLVFAIIKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDSIKR 86 (450)
T ss_dssp CCEEEECSSSSEEEEEETTEEEEEEEETTTEEEEEEEEECCC--------------------------------------
T ss_pred EEEEEecCCCCEEEEEeCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCccccc
Confidence 445667888888888888999999976555 11
Q ss_pred -------------ccCCCcceEEeeCCCCCE-EEEEECCCcEEEEEcCCCCCCCCeeeec--cCCCCeEEEEEeCCCCcE
Q psy4571 101 -------------PFPLSRQDVAWHLLHESL-FGSVADDQKLMIWDTRSHNVSKPSHTVD--AHTAEVNCLSFNPYSEYI 164 (437)
Q Consensus 101 -------------~~~~~v~~~~~sp~~~~~-l~~~~~dg~v~vwd~~~~~~~~~~~~~~--~h~~~v~~l~~~~~~~~~ 164 (437)
.+...|.+++|+| ++.+ +++|+.||.|++||+... ....+..+. .|...|.+++|+|++.+
T Consensus 87 ~~~~~~~~~~~~~~~~~~v~~~~~s~-d~~~l~~~~~~dg~v~iwd~~~~-~~~~~~~~~~~~~~~~v~~~~~sp~~~~- 163 (450)
T 2vdu_B 87 TAAKVPSPGLGAPPIYSYIRNLRLTS-DESRLIACADSDKSLLVFDVDKT-SKNVLKLRKRFCFSKRPNAISIAEDDTT- 163 (450)
T ss_dssp -------------CCCCCEEEEEECT-TSSEEEEEEGGGTEEEEEEECSS-SSSCEEEEEEEECSSCEEEEEECTTSSE-
T ss_pred cCccccCCCCCCCccCCceEEEEEcC-CCCEEEEEECCCCeEEEEECcCC-CCceeeeeecccCCCCceEEEEcCCCCE-
Confidence 0112589999999 5666 489999999999999721 124455554 67789999999999995
Q ss_pred EEEEeCCCeEEEEeCCCCce---eeeEeccCCCceEEEEEcCC---CCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCC
Q psy4571 165 LATGSADKTVALWDLRNLKL---KLHSFESHKDEIFQVQWSPH---NETILASSGTDRRLHVWDLSKIGEEQSTEDAEDG 238 (437)
Q Consensus 165 l~sgs~dg~i~lwd~~~~~~---~~~~~~~h~~~v~~v~~~p~---~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~ 238 (437)
|++|+.||.|++|++.+... +...+.+|...|++++|+|+ ++ +|++|+.|+.|++||++++..
T Consensus 164 l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~-~l~s~~~d~~i~vwd~~~~~~---------- 232 (450)
T 2vdu_B 164 VIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQ-FIITSDRDEHIKISHYPQCFI---------- 232 (450)
T ss_dssp EEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCE-EEEEEETTSCEEEEEESCTTC----------
T ss_pred EEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCc-EEEEEcCCCcEEEEECCCCce----------
Confidence 99999999999999987553 22367789999999999999 76 689999999999999987543
Q ss_pred CCceEEE-ecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeee----------------------cc
Q psy4571 239 PPELLFI-HGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDS----------------------IR 295 (437)
Q Consensus 239 ~~~~~~~-~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~----------------------~~ 295 (437)
+.. ..+|...|.+++|+ +++ +|++++.|+.|++||+++++++..+.... ..
T Consensus 233 ----~~~~~~~h~~~v~~~~~s-d~~-~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (450)
T 2vdu_B 233 ----VDKWLFGHKHFVSSICCG-KDY-LLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDII 306 (450)
T ss_dssp ----EEEECCCCSSCEEEEEEC-STT-EEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CB
T ss_pred ----eeeeecCCCCceEEEEEC-CCC-EEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccc
Confidence 222 56899999999999 888 88899999999999999998877775321 11
Q ss_pred cCCceeeeecCCCCcccccC-CCCcccccccccccccccccc--hhh---hhhhhhcCCCccccccCCCCCCcc
Q psy4571 296 SNGGISSTASPTASSTASES-PTPTNSVHEKNYWQGLVLFDI--LVC---EEQRQLLGTEEESSDRHSSDNDTE 363 (437)
Q Consensus 296 ~~~~~~~~~s~~g~~l~s~s-~d~~~~~~~~~~~~~i~~wd~--~~~---~~~~~~~~h~~~~~~~~~~~~~~~ 363 (437)
...+..++++|++.++++++ .++. |++||+ .++ +.+..+.+| ..+..+.++|++..
T Consensus 307 ~~~v~~i~~~~~~~~l~~~~~~d~~-----------i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~~~ 368 (450)
T 2vdu_B 307 EFAVSKIIKSKNLPFVAFFVEATKC-----------IIILEMSEKQKGDLALKQIITFP-YNVISLSAHNDEFQ 368 (450)
T ss_dssp CCCEEEEEECSSSSEEEEEETTCSE-----------EEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETTEEE
T ss_pred eEEEEEEEEeCCCCEEEEEECCCCe-----------EEEEEeccCCCCceeeccEeccC-CceEEEEecCCcEE
Confidence 23455679999999999988 7777 899998 666 666777888 67888888885443
No 109
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.97 E-value=1.2e-28 Score=233.01 Aligned_cols=274 Identities=9% Similarity=-0.001 Sum_probs=201.1
Q ss_pred CceeEEEecCCCCeEEEecC--------ceEEEEEeeecccc--------------ccCCCcceEEeeCCCCCEEEEE--
Q psy4571 67 PFLYDLVVNNYVANISCILN--------ISILFFEIIFTQNF--------------PFPLSRQDVAWHLLHESLFGSV-- 122 (437)
Q Consensus 67 ~~~~~~~~~~~~~~i~~~~~--------~~i~~~~~~~~~~~--------------~~~~~v~~~~~sp~~~~~l~~~-- 122 (437)
-.++.+.|++++..+++++. ..|++|++...... .+...+.++++++ ..+++|
T Consensus 15 ~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~~---~~~~~g~~ 91 (365)
T 4h5i_A 15 YPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDASK---GIILVGCN 91 (365)
T ss_dssp SCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEET---TEEEEECC
T ss_pred CCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeCC---CEEEEEEC
Confidence 35899999998888766532 25999997533211 1344677777764 456555
Q ss_pred ---------ECCCcEEEEEcCCCCCC-CCeee-----eccCCCCeEEEEEeCCCCcEEE--EEeCCCeEEEEeCCCCcee
Q psy4571 123 ---------ADDQKLMIWDTRSHNVS-KPSHT-----VDAHTAEVNCLSFNPYSEYILA--TGSADKTVALWDLRNLKLK 185 (437)
Q Consensus 123 ---------~~dg~v~vwd~~~~~~~-~~~~~-----~~~h~~~v~~l~~~~~~~~~l~--sgs~dg~i~lwd~~~~~~~ 185 (437)
+.|+.+++|++...... +.... ...+...+.+++|+|||++ ++ +++.|++|+|||+++++.
T Consensus 92 ~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~-la~as~~~d~~i~iwd~~~~~~- 169 (365)
T 4h5i_A 92 ENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTV-AAIASSKVPAIMRIIDPSDLTE- 169 (365)
T ss_dssp CCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSC-EEEEESCSSCEEEEEETTTTEE-
T ss_pred CCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCE-EEEEECCCCCEEEEeECCCCcE-
Confidence 35778999998743211 11111 1234556899999999996 54 455799999999999665
Q ss_pred eeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeE
Q psy4571 186 LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWV 265 (437)
Q Consensus 186 ~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~ 265 (437)
+..+. |...|.+++|+|+|+ ++++++. +.+++|+..++.... .....+|...|.+++|+|+++ .
T Consensus 170 ~~~~~-~~~~V~~v~fspdg~-~l~s~s~-~~~~~~~~~~~~~~~------------~~~~~~~~~~v~~v~fspdg~-~ 233 (365)
T 4h5i_A 170 KFEIE-TRGEVKDLHFSTDGK-VVAYITG-SSLEVISTVTGSCIA------------RKTDFDKNWSLSKINFIADDT-V 233 (365)
T ss_dssp EEEEE-CSSCCCEEEECTTSS-EEEEECS-SCEEEEETTTCCEEE------------EECCCCTTEEEEEEEEEETTE-E
T ss_pred EEEeC-CCCceEEEEEccCCc-eEEeccc-eeEEEEEeccCccee------------eeecCCCCCCEEEEEEcCCCC-E
Confidence 55554 788999999999998 5888875 456677766654321 133567888999999999999 7
Q ss_pred EEEEeCCC----eEEEEeCCCCCCcee-eeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhh
Q psy4571 266 ICSVSEDN----IMQEYCDSTDSDTKT-MRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCE 340 (437)
Q Consensus 266 l~s~~~dg----~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~ 340 (437)
+++++.|+ .++.|++........ ......+...+.+++|+|||++||+|+.|++ |++||+.+++
T Consensus 234 l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~-----------V~iwd~~~~~ 302 (365)
T 4h5i_A 234 LIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNS-----------IALVKLKDLS 302 (365)
T ss_dssp EEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSC-----------EEEEETTTTE
T ss_pred EEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCE-----------EEEEECCCCc
Confidence 77888776 688999877643221 1122234556778899999999999999999 8999999999
Q ss_pred hhhh-hcCCCccccccCCCCCCcccccc-------ccccC
Q psy4571 341 EQRQ-LLGTEEESSDRHSSDNDTEDLNS-------IWSMT 372 (437)
Q Consensus 341 ~~~~-~~~h~~~~~~~~~~~~~~~~~~~-------~w~~~ 372 (437)
.+.. +.+|...|.++.|+|||..+++. ||++.
T Consensus 303 ~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip 342 (365)
T 4h5i_A 303 MSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLP 342 (365)
T ss_dssp EEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECC
T ss_pred EEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcC
Confidence 9887 58999999999999999998875 89884
No 110
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.97 E-value=1.7e-27 Score=231.13 Aligned_cols=265 Identities=18% Similarity=0.244 Sum_probs=211.0
Q ss_pred ccceeEEEEeeCCCcceEEEeeccCceEeeecCCC-----------ceeEEEecCCCCeEEEecCceEEEEEeeecccc-
Q psy4571 33 SIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTP-----------FLYDLVVNNYVANISCILNISILFFEIIFTQNF- 100 (437)
Q Consensus 33 ~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~-----------~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~- 100 (437)
+...|.+++|+ ++.+++|+.|++|++|+..++ .+..+.+.+ ...++++.|+.|++||+...+..
T Consensus 158 h~~~v~~~~~~---~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~-~~l~s~s~dg~i~~wd~~~~~~~~ 233 (445)
T 2ovr_B 158 HTGGVWSSQMR---DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE-KRVVSGSRDATLRVWDIETGQCLH 233 (445)
T ss_dssp CSSCEEEEEEE---TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEET-TEEEEEETTSEEEEEESSSCCEEE
T ss_pred CCCCEEEEEec---CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEecC-CEEEEEeCCCEEEEEECCCCcEEE
Confidence 45678889987 569999999999999996544 344444432 23457788999999998755432
Q ss_pred ---ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEE
Q psy4571 101 ---PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALW 177 (437)
Q Consensus 101 ---~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lw 177 (437)
.+...+.+++| ++.++++|+.||.|++||+. ..+.+..+.+|...|.+++| ++. .+++|+.||.|++|
T Consensus 234 ~~~~~~~~v~~~~~---~~~~l~~~~~dg~i~iwd~~---~~~~~~~~~~~~~~v~~~~~--~~~-~l~~~~~d~~i~i~ 304 (445)
T 2ovr_B 234 VLMGHVAAVRCVQY---DGRRVVSGAYDFMVKVWDPE---TETCLHTLQGHTNRVYSLQF--DGI-HVVSGSLDTSIRVW 304 (445)
T ss_dssp EEECCSSCEEEEEE---CSSCEEEEETTSCEEEEEGG---GTEEEEEECCCSSCEEEEEE--CSS-EEEEEETTSCEEEE
T ss_pred EEcCCcccEEEEEE---CCCEEEEEcCCCEEEEEECC---CCcEeEEecCCCCceEEEEE--CCC-EEEEEeCCCeEEEE
Confidence 35678999999 46789999999999999998 56778888899999999999 567 49999999999999
Q ss_pred eCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecC---ccccEE
Q psy4571 178 DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGG---HTAKIS 254 (437)
Q Consensus 178 d~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~---h~~~v~ 254 (437)
|+++++. +..+.+|...+.++.++ ++ .+++|+.||.|++||+++++. +..+.+ |...|.
T Consensus 305 d~~~~~~-~~~~~~~~~~v~~~~~~--~~-~l~~~~~dg~i~vwd~~~~~~--------------~~~~~~~~~~~~~v~ 366 (445)
T 2ovr_B 305 DVETGNC-IHTLTGHQSLTSGMELK--DN-ILVSGNADSTVKIWDIKTGQC--------------LQTLQGPNKHQSAVT 366 (445)
T ss_dssp ETTTCCE-EEEECCCCSCEEEEEEE--TT-EEEEEETTSCEEEEETTTCCE--------------EEEECSTTSCSSCEE
T ss_pred ECCCCCE-EEEEcCCcccEEEEEEe--CC-EEEEEeCCCeEEEEECCCCcE--------------EEEEccCCCCCCCEE
Confidence 9999665 78888999999998885 44 589999999999999987643 333444 888999
Q ss_pred EEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeee--ecccCCceeeeecCCCCcccccCCCCcccccccccccccc
Q psy4571 255 DFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLD--SIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLV 332 (437)
Q Consensus 255 ~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~--~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~ 332 (437)
+++|+ ++ ++++|+.||.|++||+++++.+..+... ..+...+..++|+|++.++++|+.|++... .+.
T Consensus 367 ~~~~~--~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~-------~l~ 436 (445)
T 2ovr_B 367 CLQFN--KN-FVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEET-------KLL 436 (445)
T ss_dssp EEEEC--SS-EEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCC-------EEE
T ss_pred EEEEC--CC-EEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCcc-------EEE
Confidence 99996 44 7999999999999999999887776422 234455677799999999999999986211 167
Q ss_pred cccchh
Q psy4571 333 LFDILV 338 (437)
Q Consensus 333 ~wd~~~ 338 (437)
+||+..
T Consensus 437 v~df~~ 442 (445)
T 2ovr_B 437 VLDFDV 442 (445)
T ss_dssp EEECCC
T ss_pred EEECCC
Confidence 777653
No 111
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.96 E-value=6e-29 Score=237.44 Aligned_cols=247 Identities=11% Similarity=0.036 Sum_probs=166.5
Q ss_pred CCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeC-------CCCC
Q psy4571 45 PFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHL-------LHES 117 (437)
Q Consensus 45 ~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp-------~~~~ 117 (437)
+.+.++++|+.|++||+|+..++........ .....|...|++++|+| .++.
T Consensus 99 ~~~~~las~~~d~~v~lw~~~~~~~~~~~~~---------------------~~~~gH~~~v~~v~~~p~~~~~~~~d~~ 157 (393)
T 4gq1_A 99 VYSLFLACVCQDNTVRLIITKNETIITQHVL---------------------GGKSGHHNFVNDIDIADVYSADNRLAEQ 157 (393)
T ss_dssp EEEEEEEEEETTSCEEEEEEETTEEEEEEEE---------------------CTTTSCSSCEEEEEEEEEECTTCSEEEE
T ss_pred CCCCEEEEEeCCCcEEEEECCCCccceeeee---------------------cccCCCCCceEEEEEccccccccCCCCC
Confidence 4555667777777777777655443221110 01123567899999987 2568
Q ss_pred EEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceee-----------
Q psy4571 118 LFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKL----------- 186 (437)
Q Consensus 118 ~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~----------- 186 (437)
+||+|+.|++|+|||+. ...+...+..|..+|.+++|+|++..+|++|+.||+|++||+++++...
T Consensus 158 ~las~s~D~tv~~Wd~~---~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~ 234 (393)
T 4gq1_A 158 VIASVGDDCTLIIWRLT---DEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNP 234 (393)
T ss_dssp EEEEEETTSEEEEEEEE---TTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCC
T ss_pred EEEEEECCCeEEEEECC---CCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccc
Confidence 99999999999999998 4456667778999999999999987679999999999999998754311
Q ss_pred -------------eEeccCCCceEEEEEc-CCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCC-----CCceEEEec
Q psy4571 187 -------------HSFESHKDEIFQVQWS-PHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDG-----PPELLFIHG 247 (437)
Q Consensus 187 -------------~~~~~h~~~v~~v~~~-p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~-----~~~~~~~~~ 247 (437)
....+|...+.++.|+ |+++ .+++++.|+++++||+............... .........
T Consensus 235 ~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~-~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 313 (393)
T 4gq1_A 235 WLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGS-GILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGIS 313 (393)
T ss_dssp CSEEEESGGGC------CCSSSCSEEEEETTTTC-EEEEECTTSEEEEEEC-------------------CCSCSEEEEC
T ss_pred eEEecccccceeeeecccccccceeeeeecCCCC-EEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEcccccccc
Confidence 1123577888999987 7887 5899999999999999876544332211000 001111222
Q ss_pred CccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCc
Q psy4571 248 GHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPT 319 (437)
Q Consensus 248 ~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~ 319 (437)
.+...+..+.+.+.+..++++|+.||.|++||+.++++...... +...+..++|+|||++||+++.++.
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~---~~~~V~svafspdG~~LA~as~~Gv 382 (393)
T 4gq1_A 314 LFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQ---LGMPIVDFCWHQDGSHLAIATEGSV 382 (393)
T ss_dssp SSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEE---CSSCEEEEEECTTSSEEEEEESSEE
T ss_pred ccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecC---CCCcEEEEEEcCCCCEEEEEeCCCe
Confidence 22222333333334455677888999999999999987766543 4567788899999999999998885
No 112
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.3e-27 Score=220.16 Aligned_cols=243 Identities=16% Similarity=0.123 Sum_probs=191.7
Q ss_pred cceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeC
Q psy4571 34 IYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHL 113 (437)
Q Consensus 34 ~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp 113 (437)
...|.+++|+ |+++.+++|+.|+.+++|+........ .+ .....+...+.+++|+
T Consensus 59 ~~~v~~~~~~-~~~~~l~~~~~dg~i~~~~~~~~~~~~--------~~---------------~~~~~~~~~i~~~~~~- 113 (313)
T 3odt_A 59 QGFLNSVCYD-SEKELLLFGGKDTMINGVPLFATSGED--------PL---------------YTLIGHQGNVCSLSFQ- 113 (313)
T ss_dssp SSCEEEEEEE-TTTTEEEEEETTSCEEEEETTCCTTSC--------C----------------CEECCCSSCEEEEEEE-
T ss_pred CccEEEEEEC-CCCCEEEEecCCCeEEEEEeeecCCCC--------cc---------------cchhhcccCEEEEEec-
Confidence 5567888888 888888888888888888864421100 00 0011245678889884
Q ss_pred CCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeC-CCCcEEEEEeCCCeEEEEeCCCCceeeeEecc-
Q psy4571 114 LHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNP-YSEYILATGSADKTVALWDLRNLKLKLHSFES- 191 (437)
Q Consensus 114 ~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~-~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~- 191 (437)
+.++++++.||.|++||. ......+..|...+.+++|+| ++. .+++++.||.|++||.. + ....+..
T Consensus 114 --~~~l~~~~~d~~i~~~d~-----~~~~~~~~~~~~~v~~~~~~~~~~~-~l~~~~~d~~i~i~d~~--~-~~~~~~~~ 182 (313)
T 3odt_A 114 --DGVVISGSWDKTAKVWKE-----GSLVYNLQAHNASVWDAKVVSFSEN-KFLTASADKTIKLWQND--K-VIKTFSGI 182 (313)
T ss_dssp --TTEEEEEETTSEEEEEET-----TEEEEEEECCSSCEEEEEEEETTTT-EEEEEETTSCEEEEETT--E-EEEEECSS
T ss_pred --CCEEEEEeCCCCEEEEcC-----CcEEEecccCCCceeEEEEccCCCC-EEEEEECCCCEEEEecC--c-eEEEEecc
Confidence 568999999999999992 356777889999999999998 666 59999999999999943 3 3556665
Q ss_pred CCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeC
Q psy4571 192 HKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSE 271 (437)
Q Consensus 192 h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~ 271 (437)
|...+.+++|+|++. +++++.||.|++||+++++ .+..+.+|...|++++|+|++. +++++.
T Consensus 183 ~~~~i~~~~~~~~~~--~~~~~~dg~i~i~d~~~~~--------------~~~~~~~~~~~i~~~~~~~~~~--l~~~~~ 244 (313)
T 3odt_A 183 HNDVVRHLAVVDDGH--FISCSNDGLIKLVDMHTGD--------------VLRTYEGHESFVYCIKLLPNGD--IVSCGE 244 (313)
T ss_dssp CSSCEEEEEEEETTE--EEEEETTSEEEEEETTTCC--------------EEEEEECCSSCEEEEEECTTSC--EEEEET
T ss_pred CcccEEEEEEcCCCe--EEEccCCCeEEEEECCchh--------------hhhhhhcCCceEEEEEEecCCC--EEEEec
Confidence 899999999999986 7899999999999998753 4556788999999999999995 679999
Q ss_pred CCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhh
Q psy4571 272 DNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQL 345 (437)
Q Consensus 272 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~ 345 (437)
||.|++||+++++....+.. +...+..++|+|+++ +++++.|+. +++||+.+++.....
T Consensus 245 dg~v~iwd~~~~~~~~~~~~---~~~~i~~~~~~~~~~-~~~~~~dg~-----------i~iw~~~~~~~~~~~ 303 (313)
T 3odt_A 245 DRTVRIWSKENGSLKQVITL---PAISIWSVDCMSNGD-IIVGSSDNL-----------VRIFSQEKSRWASED 303 (313)
T ss_dssp TSEEEEECTTTCCEEEEEEC---SSSCEEEEEECTTSC-EEEEETTSC-----------EEEEESCGGGCCC--
T ss_pred CCEEEEEECCCCceeEEEec---cCceEEEEEEccCCC-EEEEeCCCc-----------EEEEeCCCCceeehh
Confidence 99999999999987777654 445677889999999 556788888 899999888765443
No 113
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.96 E-value=1.4e-27 Score=231.05 Aligned_cols=260 Identities=17% Similarity=0.237 Sum_probs=205.9
Q ss_pred CceeEEEecCCCCe-EEEecCceEEEEEeeecccc----ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCC
Q psy4571 67 PFLYDLVVNNYVAN-ISCILNISILFFEIIFTQNF----PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKP 141 (437)
Q Consensus 67 ~~~~~~~~~~~~~~-i~~~~~~~i~~~~~~~~~~~----~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~ 141 (437)
..+..+.+ +... +++..|+.|++||....+.. .+...|.+++| ++.+|++|+.||.|++||+. ..+.
T Consensus 134 ~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~---~~~~l~sg~~dg~i~vwd~~---~~~~ 205 (435)
T 1p22_A 134 KGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY---DERVIITGSSDSTVRVWDVN---TGEM 205 (435)
T ss_dssp CCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC---CSSEEEEEETTSCEEEEESS---SCCE
T ss_pred CcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE---CCCEEEEEcCCCeEEEEECC---CCcE
Confidence 44665554 3343 47788999999997654432 36678999998 46799999999999999998 5677
Q ss_pred eeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCcee--eeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEE
Q psy4571 142 SHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLK--LHSFESHKDEIFQVQWSPHNETILASSGTDRRLH 219 (437)
Q Consensus 142 ~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~--~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~ 219 (437)
+..+.+|...|.+++|++ . .+++|+.||.|++||++++... ...+.+|...|.+++| +++ .+++|+.||.|+
T Consensus 206 ~~~~~~h~~~v~~l~~~~--~-~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~-~l~s~~~dg~i~ 279 (435)
T 1p22_A 206 LNTLIHHCEAVLHLRFNN--G-MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDK-YIVSASGDRTIK 279 (435)
T ss_dssp EEEECCCCSCEEEEECCT--T-EEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETT-EEEEEETTSEEE
T ss_pred EEEEcCCCCcEEEEEEcC--C-EEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCC-EEEEEeCCCeEE
Confidence 888899999999999974 3 5999999999999999986542 2567889999999999 555 589999999999
Q ss_pred EEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCc
Q psy4571 220 VWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGG 299 (437)
Q Consensus 220 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 299 (437)
+||++++. .+..+.+|...|.+++|+ +. ++++|+.||.|++||+++++++..+.. +...+
T Consensus 280 vwd~~~~~--------------~~~~~~~~~~~v~~~~~~--~~-~l~~g~~dg~i~iwd~~~~~~~~~~~~---h~~~v 339 (435)
T 1p22_A 280 VWNTSTCE--------------FVRTLNGHKRGIACLQYR--DR-LVVSGSSDNTIRLWDIECGACLRVLEG---HEELV 339 (435)
T ss_dssp EEETTTCC--------------EEEEEECCSSCEEEEEEE--TT-EEEEEETTSCEEEEETTTCCEEEEECC---CSSCE
T ss_pred EEECCcCc--------------EEEEEcCCCCcEEEEEeC--CC-EEEEEeCCCeEEEEECCCCCEEEEEeC---CcCcE
Confidence 99998763 455678999999999994 45 789999999999999999987776653 34445
Q ss_pred eeeeecCCCCcccccCCCCcccccccccccccccccchhhh---------hhhhhcCCCccccccCCCCCCcccccc---
Q psy4571 300 ISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCE---------EQRQLLGTEEESSDRHSSDNDTEDLNS--- 367 (437)
Q Consensus 300 ~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~---------~~~~~~~h~~~~~~~~~~~~~~~~~~~--- 367 (437)
..+++ ++.++++|+.|+. |++||+.+++ .+..+.+|...+.++.+ ++..+++.
T Consensus 340 ~~~~~--~~~~l~sg~~dg~-----------i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~D 404 (435)
T 1p22_A 340 RCIRF--DNKRIVSGAYDGK-----------IKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHD 404 (435)
T ss_dssp EEEEC--CSSEEEEEETTSC-----------EEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSS
T ss_pred EEEEe--cCCEEEEEeCCCc-----------EEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCC
Confidence 55555 8999999999998 8999999887 67788999999998887 44444443
Q ss_pred ----ccccCHHH
Q psy4571 368 ----IWSMTDEQ 375 (437)
Q Consensus 368 ----~w~~~~~~ 375 (437)
+|++....
T Consensus 405 g~i~iwd~~~~~ 416 (435)
T 1p22_A 405 DTILIWDFLNDP 416 (435)
T ss_dssp SEEEEEC-----
T ss_pred CEEEEEECCCCC
Confidence 89985543
No 114
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.96 E-value=1.4e-27 Score=216.62 Aligned_cols=284 Identities=11% Similarity=0.057 Sum_probs=177.0
Q ss_pred hhhhhhhcccceeEEecCC--cccccceeEEEEeeCCCcc-eEEEeeccCceEeeecCCC--------------ceeEEE
Q psy4571 11 PKLLLHLSQNAFFTWSALP--LSHSIYRFYRLCVAEPFDD-AVEERVINEEYKIWKKNTP--------------FLYDLV 73 (437)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~-~l~tgs~d~~v~iw~~~~~--------------~~~~~~ 73 (437)
.+..+.+++--+.+.+..+ ..-....+.++-+..+..+ .-+.......|++|+.+.+ .+..+.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~ 93 (356)
T 2w18_A 14 LPASDSINPGNLQLVSELKNPSGSCSVDVSAMFWERAGCKEPCIITACEDVVSLWKALDAWQWEKLYTWHFAEVPVLQIV 93 (356)
T ss_dssp ----------CEEEEEEECCCCSSCEEEEEEEEEC----CEEEEEEEESSEEEEEEESSSSBEEEEEEEECCSSCEEEEC
T ss_pred CccccCcCcceeeeeehhcCCCCCeEEEEeeeeeccCCCCccEEEEeccceEEEcccCCCccceeeEEEeccCceeEEEE
Confidence 3445555653343433332 2233455666666644432 2333344778999997665 355555
Q ss_pred ecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeCC---------------------CCCEEEEEE--CCCcEEE
Q psy4571 74 VNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHLL---------------------HESLFGSVA--DDQKLMI 130 (437)
Q Consensus 74 ~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp~---------------------~~~~l~~~~--~dg~v~v 130 (437)
+.++...+.|..-|.+.+ ..|+.++|+|+ +++++.+++ .|+.|++
T Consensus 94 ~~~~~~~~~~~~~~~~~~------------~~v~sla~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~ 161 (356)
T 2w18_A 94 PVPDVYNLVCVALGNLEI------------REIRALFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEV 161 (356)
T ss_dssp CCTTCCSCEEEEECSSSE------------EEEEEECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEE
T ss_pred EcCcccceeeeeeccccc------------cceEEEEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEE
Confidence 555555555544332211 12334444441 233333322 4999999
Q ss_pred EEcCCCCCCCCeeeeccCCCCeEEEEEeC---CCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCC---CceEEEEEcCC
Q psy4571 131 WDTRSHNVSKPSHTVDAHTAEVNCLSFNP---YSEYILATGSADKTVALWDLRNLKLKLHSFESHK---DEIFQVQWSPH 204 (437)
Q Consensus 131 wd~~~~~~~~~~~~~~~h~~~v~~l~~~~---~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~---~~v~~v~~~p~ 204 (437)
|++.. .++.+..+.+|...+..++|+| ++. +|++|+.|++|+|||+++++. +.++.+|. ..+.+++|+|+
T Consensus 162 ~~~s~--dG~~~~s~~~~~~~v~~l~fs~~~g~~~-~LaSgS~D~TIkIWDl~TGk~-l~tL~g~~~~v~~v~~vafSpd 237 (356)
T 2w18_A 162 MTFAE--DGGGKENQFLMPPEETILTFAEVQGMQE-ALLGTTIMNNIVIWNLKTGQL-LKKMHIDDSYQASVCHKAYSEM 237 (356)
T ss_dssp EEECT--TSCEEEEEEECCCSSCEEEEEEEETSTT-EEEEEETTSEEEEEETTTCCE-EEEEECCC---CCCEEEEEEET
T ss_pred EEECC--CCceeeeeccCCCceeeEEeeccCCCCc-eEEEecCCCcEEEEECCCCcE-EEEEcCCCcceeeeEEEEECCC
Confidence 99963 3566777788999999999998 667 599999999999999999775 77777643 46788899999
Q ss_pred CCcE-----------EEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCC
Q psy4571 205 NETI-----------LASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273 (437)
Q Consensus 205 ~~~~-----------l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg 273 (437)
|..+ +++|+.|++|++||..++...... .+....+|...+.+..++ +. ++++++.|+
T Consensus 238 G~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~---------~~~~p~Gh~~~~lsg~~s--g~-~lASgS~Dg 305 (356)
T 2w18_A 238 GLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVM---------LYCLPPGQAGRFLEGDVK--DH-CAAAILTSG 305 (356)
T ss_dssp TEEEEEEC------------CCEEEEEEETTTTEEEEEE---------EECCCTTCCCCEEEEEEE--TT-EEEEEETTS
T ss_pred CCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEE---------EeeccCCCcceeEccccC--CC-EEEEEcCCC
Confidence 9753 367889999999999876432210 000024666655544444 66 899999999
Q ss_pred eEEEEeCCCCCCceeeeeeecccCCcee-eeecCCCCcccccCCCCcccccccccccccccccc
Q psy4571 274 IMQEYCDSTDSDTKTMRLDSIRSNGGIS-STASPTASSTASESPTPTNSVHEKNYWQGLVLFDI 336 (437)
Q Consensus 274 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~ 336 (437)
+|++||+.+++++.++.. +...+.. ++|||||++|++|+.|++ |++||+
T Consensus 306 TIkIWDl~tGk~l~tL~g---H~~~vvs~vafSPDG~~LaSGS~D~T-----------IklWd~ 355 (356)
T 2w18_A 306 TIAIWDLLLGQCTALLPP---VSDQHWSFVKWSGTDSHLLAGQKDGN-----------IFVYHY 355 (356)
T ss_dssp CEEEEETTTCSEEEEECC---C--CCCCEEEECSSSSEEEEECTTSC-----------EEEEEE
T ss_pred cEEEEECCCCcEEEEecC---CCCCeEEEEEECCCCCEEEEEECCCc-----------EEEecC
Confidence 999999999998888753 3344454 699999999999999999 788875
No 115
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.96 E-value=4.9e-27 Score=216.88 Aligned_cols=258 Identities=17% Similarity=0.271 Sum_probs=200.2
Q ss_pred cceeEEecCCcc--------cccceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEE
Q psy4571 20 NAFFTWSALPLS--------HSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILF 91 (437)
Q Consensus 20 ~~~~~~~~~~~~--------~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~ 91 (437)
+.+++|+...-. .+...|.+++|+ |+++.+++|+.|++|++|+..++....... .
T Consensus 45 ~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~-~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~-~--------------- 107 (318)
T 4ggc_A 45 NSVYLWSASSGDILQLLQMEQPGEYISSVAWI-KEGNYLAVGTSSAEVQLWDVQQQKRLRNMT-S--------------- 107 (318)
T ss_dssp TEEEEEETTTCCEEEEEECCSTTCCEEEEEEC-TTSSEEEEEETTSEEEEEETTTTEEEEEEE-C---------------
T ss_pred CEEEEEECCCCCEEEEEEecCCCCeEEEEEEC-CCCCEEEEEECCCcEEEeecCCceeEEEec-C---------------
Confidence 456677654322 234458999999 999999999999999999988876654422 1
Q ss_pred EEeeeccccccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCC
Q psy4571 92 FEIIFTQNFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSAD 171 (437)
Q Consensus 92 ~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~d 171 (437)
+...+.+ +++ ++.++++|+.++.+++|+.... ...+..+.+|...+.++.+++++.. |++++.|
T Consensus 108 ----------h~~~~~~--~~~-~~~~l~s~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-l~s~~~d 171 (318)
T 4ggc_A 108 ----------HSARVGS--LSW-NSYILSSGSRSGHIHHHDVRVA--EHHVATLSGHSQEVCGLRWAPDGRH-LASGGND 171 (318)
T ss_dssp ----------CSSCEEE--EEE-ETTEEEEEETTSEEEEEETTSS--SCEEEEEECCSSCEEEEEECTTSSE-EEEEETT
T ss_pred ----------ccceEEE--eec-CCCEEEEEecCCceEeeecCCC--ceeEEEEcCccCceEEEEEcCCCCE-EEEEecC
Confidence 1122333 333 4578999999999999998753 3566778899999999999999995 9999999
Q ss_pred CeEEEEeCCCCce---eeeEeccCCCceEEEEEcCCCCcEE--EEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEe
Q psy4571 172 KTVALWDLRNLKL---KLHSFESHKDEIFQVQWSPHNETIL--ASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIH 246 (437)
Q Consensus 172 g~i~lwd~~~~~~---~~~~~~~h~~~v~~v~~~p~~~~~l--~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 246 (437)
|.|++||+++++. .......|.+.|.+++++|++..++ ++++.++.|++||.+.... ...
T Consensus 172 ~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~---------------~~~ 236 (318)
T 4ggc_A 172 NLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGAC---------------LSA 236 (318)
T ss_dssp SCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCE---------------EEE
T ss_pred cceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccc---------------ccc
Confidence 9999999987543 2345567888999999999887755 3567789999999987542 223
Q ss_pred cCccccEEEEEEccCCCeEEEE-EeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCccccccc
Q psy4571 247 GGHTAKISDFSWNPNEPWVICS-VSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEK 325 (437)
Q Consensus 247 ~~h~~~v~~l~~~p~~~~~l~s-~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~ 325 (437)
..+...+..+.|+|+++.++++ |+.|+.|++||+++++++..+.. |...+..++|+|+|++|++|+.|++
T Consensus 237 ~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~g---H~~~V~~l~~spdg~~l~S~s~D~~------ 307 (318)
T 4ggc_A 237 VDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKG---HTSRVLSLTMSPDGATVASAAADET------ 307 (318)
T ss_dssp EECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECC---CSSCEEEEEECTTSSCEEEEETTTE------
T ss_pred ccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcC---CCCCEEEEEEcCCCCEEEEEecCCe------
Confidence 4566789999999999955433 34799999999999988877754 5667788899999999999999999
Q ss_pred ccccccccccchhh
Q psy4571 326 NYWQGLVLFDILVC 339 (437)
Q Consensus 326 ~~~~~i~~wd~~~~ 339 (437)
|++||+...
T Consensus 308 -----v~iWd~~~~ 316 (318)
T 4ggc_A 308 -----LRLWRCFEL 316 (318)
T ss_dssp -----EEEECCSCC
T ss_pred -----EEEEECCCC
Confidence 788887543
No 116
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.96 E-value=2.1e-28 Score=252.71 Aligned_cols=244 Identities=19% Similarity=0.225 Sum_probs=201.3
Q ss_pred ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCC--CCcEEEEEeCCCeEEEEe
Q psy4571 101 PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPY--SEYILATGSADKTVALWD 178 (437)
Q Consensus 101 ~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~--~~~~l~sgs~dg~i~lwd 178 (437)
.|...|++++|+| ++.+|++|+.||.|++||+... .......+.+|.++|.+++|+|+ +. .|++|+.||.|++||
T Consensus 7 gH~~~V~~l~~s~-dg~~latg~~dg~I~vwd~~~~-~~~~~~~l~~h~~~V~~l~~s~~~~~~-~l~s~s~Dg~I~vwd 83 (753)
T 3jro_A 7 AHNELIHDAVLDY-YGKRLATCSSDKTIKIFEVEGE-THKLIDTLTGHEGPVWRVDWAHPKFGT-ILASCSYDGKVLIWK 83 (753)
T ss_dssp -CCCCEEEECCCS-SSCCEEEEETTTEEEEEEEETT-EEEEEEEECCCSSCEEEEEECCTTSCS-EEEEEETTSCEEEEE
T ss_pred cCcceeEEEEECC-CCCeEEEEECCCcEEEEecCCC-CCccceeccCCcCceEEEEecCCCCCC-EEEEEeCCCeEEEEE
Confidence 3567899999999 6789999999999999999743 34567788899999999999988 77 599999999999999
Q ss_pred CCCCce-eeeEeccCCCceEEEEEcCC--CCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEE
Q psy4571 179 LRNLKL-KLHSFESHKDEIFQVQWSPH--NETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISD 255 (437)
Q Consensus 179 ~~~~~~-~~~~~~~h~~~v~~v~~~p~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 255 (437)
+++++. ....+..|...|++++|+|+ ++ .+++|+.||.|++||++...... .....+|...|.+
T Consensus 84 ~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~-~l~sgs~dg~I~vwdl~~~~~~~------------~~~~~~~~~~v~~ 150 (753)
T 3jro_A 84 EENGRWSQIAVHAVHSASVNSVQWAPHEYGP-LLLVASSDGKVSVVEFKENGTTS------------PIIIDAHAIGVNS 150 (753)
T ss_dssp EETTEEEEEEEECCCSSCEEEEEECCGGGCS-EEEEEETTSEEEEEECCSSSCCC------------CEEEECCSSCEEE
T ss_pred CCCCcccccccccCCCCCeEEEEECCCCCCC-EEEEEeCCCcEEEEEeecCCCcc------------eeEeecCCCceEE
Confidence 998652 36677889999999999999 77 69999999999999998864322 2446789999999
Q ss_pred EEEccC-------------CCeEEEEEeCCCeEEEEeCCCCCCceeee-eeecccCCceeeeecCC---CCcccccCCCC
Q psy4571 256 FSWNPN-------------EPWVICSVSEDNIMQEYCDSTDSDTKTMR-LDSIRSNGGISSTASPT---ASSTASESPTP 318 (437)
Q Consensus 256 l~~~p~-------------~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~s~~---g~~l~s~s~d~ 318 (437)
++|+|. +. ++++|+.||.|++||++++....... ....+...+..++|+|+ +.++++++.|+
T Consensus 151 l~~~p~~~~~~~~~~~~~d~~-~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg 229 (753)
T 3jro_A 151 ASWAPATIEEDGEHNGTKESR-KFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDR 229 (753)
T ss_dssp EEECCCC---------CGGGC-CEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSS
T ss_pred EEecCcccccccccccCCCCC-EEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCC
Confidence 999994 66 78899999999999999875543322 22335566778899999 99999999999
Q ss_pred cccccccccccccccccchhhh-----hhhhhcCCCccccccCCCCCCcccccc-------ccccC
Q psy4571 319 TNSVHEKNYWQGLVLFDILVCE-----EQRQLLGTEEESSDRHSSDNDTEDLNS-------IWSMT 372 (437)
Q Consensus 319 ~~~~~~~~~~~~i~~wd~~~~~-----~~~~~~~h~~~~~~~~~~~~~~~~~~~-------~w~~~ 372 (437)
. +++||+.+++ ......+|...+..+.++|+|..+++. +|++.
T Consensus 230 ~-----------I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~ 284 (753)
T 3jro_A 230 T-----------CIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (753)
T ss_dssp C-----------EEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCC
T ss_pred E-----------EEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecC
Confidence 8 8999998875 344456788999999999999877764 88875
No 117
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.96 E-value=8.2e-27 Score=222.19 Aligned_cols=269 Identities=12% Similarity=0.057 Sum_probs=204.8
Q ss_pred ceEEEeeccCceEeeecCCCc----------eeEEEecCCCCeE--EEecCceEEEEEeeecc---ccccCCCcceEEee
Q psy4571 48 DAVEERVINEEYKIWKKNTPF----------LYDLVVNNYVANI--SCILNISILFFEIIFTQ---NFPFPLSRQDVAWH 112 (437)
Q Consensus 48 ~~l~tgs~d~~v~iw~~~~~~----------~~~~~~~~~~~~i--~~~~~~~i~~~~~~~~~---~~~~~~~v~~~~~s 112 (437)
.++++++.|+.|++|+..++. +..+.+++....+ ++..++.|++||...++ .+.....+.+++|+
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~s 82 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAVS 82 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSSEEEEEEC
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEeecCCCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCCCccceEEC
Confidence 467889999999999965433 5566777777765 33478899999975443 33455689999999
Q ss_pred CCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccC
Q psy4571 113 LLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESH 192 (437)
Q Consensus 113 p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h 192 (437)
|++..++++++.++.|++||+. ..+.+..+.. ...+.+++|+|+++.++++++.|+.|++||+++++. ...+..+
T Consensus 83 pdg~~l~~~~~~~~~v~v~d~~---~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~-~~~~~~~ 157 (391)
T 1l0q_A 83 PDGKQVYVTNMASSTLSVIDTT---SNTVAGTVKT-GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAV-INTVSVG 157 (391)
T ss_dssp TTSSEEEEEETTTTEEEEEETT---TTEEEEEEEC-SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE-EEEEECC
T ss_pred CCCCEEEEEECCCCEEEEEECC---CCeEEEEEeC-CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcE-EEEEecC
Confidence 9544344566677999999998 4455555554 457899999999997558899999999999998654 5566544
Q ss_pred CCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEe--
Q psy4571 193 KDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVS-- 270 (437)
Q Consensus 193 ~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~-- 270 (437)
..+.+++|+|+++.++++++.|+.|++||+++... +... .+...+.+++|+|+++.+++++.
T Consensus 158 -~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~--------------~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~ 221 (391)
T 1l0q_A 158 -RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSV--------------IDTV-KVEAAPSGIAVNPEGTKAYVTNVDK 221 (391)
T ss_dssp -SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE--------------EEEE-ECSSEEEEEEECTTSSEEEEEEECS
T ss_pred -CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeE--------------EEEE-ecCCCccceEECCCCCEEEEEecCc
Confidence 56799999999997667888999999999987532 2223 34567899999999995444443
Q ss_pred CCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcc-cccCCCCcccccccccccccccccchhhhhhhhhcCCC
Q psy4571 271 EDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASST-ASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTE 349 (437)
Q Consensus 271 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l-~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~ 349 (437)
.++.|++||+++++.+..+.. +..+..++|+|+|+.+ ++++.++. +++||+.+++.+..+..|.
T Consensus 222 ~~~~v~~~d~~~~~~~~~~~~----~~~~~~~~~s~dg~~l~~s~~~d~~-----------v~v~d~~~~~~~~~~~~~~ 286 (391)
T 1l0q_A 222 YFNTVSMIDTGTNKITARIPV----GPDPAGIAVTPDGKKVYVALSFXNT-----------VSVIDTATNTITATMAVGK 286 (391)
T ss_dssp SCCEEEEEETTTTEEEEEEEC----CSSEEEEEECTTSSEEEEEETTTTE-----------EEEEETTTTEEEEEEECSS
T ss_pred CCCcEEEEECCCCeEEEEEec----CCCccEEEEccCCCEEEEEcCCCCE-----------EEEEECCCCcEEEEEECCc
Confidence 799999999998876665543 3345678999999977 66677877 8999999999988887776
Q ss_pred ccc
Q psy4571 350 EES 352 (437)
Q Consensus 350 ~~~ 352 (437)
.+.
T Consensus 287 ~~~ 289 (391)
T 1l0q_A 287 NPY 289 (391)
T ss_dssp SEE
T ss_pred CCC
Confidence 553
No 118
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.4e-27 Score=230.32 Aligned_cols=261 Identities=12% Similarity=0.073 Sum_probs=195.8
Q ss_pred CceeEEEecCCCCeE-EEecCceEEEEEeeecccc-ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeee
Q psy4571 67 PFLYDLVVNNYVANI-SCILNISILFFEIIFTQNF-PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHT 144 (437)
Q Consensus 67 ~~~~~~~~~~~~~~i-~~~~~~~i~~~~~~~~~~~-~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~ 144 (437)
..+.++.|++++..+ +++.|++|+ |....+.+ .++..|.+++|+|+ + .++.+.+|+.+ ... +..
T Consensus 16 ~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~~l~gh~~~v~~V~FsPd-g-------~~~~~~~~~~~---~~~-~~~ 81 (588)
T 2j04_A 16 DWKNNLTWARDGTLYLTTFPDISIG--QPKYAKDINCNSKNLFHVKEFPL-E-------FENKLDFELAQ---QNG-LLN 81 (588)
T ss_dssp SSSCCEEECTTSCEEEECSSSEEEE--EECCCSCCSSBGGGTEEEEEECC-C-------CCCTTTTSCCC---SSC-SST
T ss_pred ccEEEEEECCCCCEEEEEcCCceee--cccccceecCCCccEEEEEECCC-C-------CcceEEEEeCC---Cce-Eee
Confidence 667889999999887 557788888 76555543 46778999999995 4 46655555543 222 222
Q ss_pred eccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCC-----ceEEEEEcCCCCcEEEEEeCCCeEE
Q psy4571 145 VDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKD-----EIFQVQWSPHNETILASSGTDRRLH 219 (437)
Q Consensus 145 ~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~-----~v~~v~~~p~~~~~l~sg~~dg~i~ 219 (437)
+ .|...|.+++|+|+|.. ||+++.||.|++||.+. .+..+. |.. .|.+++|+|+|+. |++|+.||+|+
T Consensus 82 ~-~~~~~V~~vawSPdG~~-LAs~s~dg~V~iwd~~~---~l~~l~-~~~~~~~~sv~svafSPDG~~-LAsgs~DGtVk 154 (588)
T 2j04_A 82 S-QPVCYPRVCKPSPIDDW-MAVLSNNGNVSVFKDNK---MLTNLD-SKGNLSSRTYHCFEWNPIESS-IVVGNEDGELQ 154 (588)
T ss_dssp T-SCSCCEEEEEECSSSSC-EEEEETTSCEEEEETTE---EEEECC-CSSCSTTTCEEEEEECSSSSC-EEEEETTSEEE
T ss_pred c-CCCCcEEEEEECCCCCE-EEEEeCCCcEEEEeCCc---eeeecc-CCCccccccEEEEEEcCCCCE-EEEEcCCCEEE
Confidence 2 45788999999999996 99999999999999654 355666 665 4999999999995 99999999999
Q ss_pred EEEcCCCCCCCCCCCCCCCCCceEEEe----cCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceee-eeeec
Q psy4571 220 VWDLSKIGEEQSTEDAEDGPPELLFIH----GGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTM-RLDSI 294 (437)
Q Consensus 220 vwd~~~~~~~~~~~~~~~~~~~~~~~~----~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~-~~~~~ 294 (437)
+||+..+..... ..-.+..+ .+|...|.+++|+|+| +++++.|+.|++||+.+++..... .....
T Consensus 155 IWd~~~~~l~~~-------~~i~l~ti~~~~~gh~~~V~sVawSPdg---Laass~D~tVrlWd~~~~~~~~~~~tL~~~ 224 (588)
T 2j04_A 155 FFSIRKNSENTP-------EFYFESSIRLSDAGSKDWVTHIVWYEDV---LVAALSNNSVFSMTVSASSHQPVSRMIQNA 224 (588)
T ss_dssp EEECCCCTTTCC-------CCEEEEEEECSCTTCCCCEEEEEEETTE---EEEEETTCCEEEECCCSSSSCCCEEEEECC
T ss_pred EEECCCCccccc-------cceeeeeeecccccccccEEEEEEcCCc---EEEEeCCCeEEEEECCCCccccceeeeccc
Confidence 999987532110 00123444 6788899999999998 668899999999999887643111 11123
Q ss_pred ccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCCccccccCC--CCCCcccccc-----
Q psy4571 295 RSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHS--SDNDTEDLNS----- 367 (437)
Q Consensus 295 ~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~--~~~~~~~~~~----- 367 (437)
+...+..++|+ |+.+++++ ++. |++||+.+++......||.+.+..+.+ +|++..++.+
T Consensus 225 h~~~V~svaFs--g~~LASa~-~~t-----------IkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~ 290 (588)
T 2j04_A 225 SRRKITDLKIV--DYKVVLTC-PGY-----------VHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY 290 (588)
T ss_dssp CSSCCCCEEEE--TTEEEEEC-SSE-----------EEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE
T ss_pred ccCcEEEEEEE--CCEEEEEe-CCe-----------EEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC
Confidence 45678888999 68888887 466 899999988774444489999999999 9999766554
Q ss_pred -ccccC
Q psy4571 368 -IWSMT 372 (437)
Q Consensus 368 -~w~~~ 372 (437)
+|..+
T Consensus 291 klw~~d 296 (588)
T 2j04_A 291 KVLLED 296 (588)
T ss_dssp EEEESS
T ss_pred EEEeec
Confidence 66665
No 119
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.96 E-value=4.8e-28 Score=226.15 Aligned_cols=237 Identities=11% Similarity=0.024 Sum_probs=193.7
Q ss_pred ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCC-cEEEEEeCCCeEEEEeC
Q psy4571 101 PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSE-YILATGSADKTVALWDL 179 (437)
Q Consensus 101 ~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~-~~l~sgs~dg~i~lwd~ 179 (437)
.+...|.+++|+| ++.+|++++.||.|++||+...........+.+|...|.+++|+|++. . |++|+.||.|++||+
T Consensus 9 ~h~~~v~~~~~s~-~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-l~~~~~dg~i~~wd~ 86 (342)
T 1yfq_A 9 APKDYISDIKIIP-SKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQ-IYVGTVQGEILKVDL 86 (342)
T ss_dssp CCSSCEEEEEEEG-GGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEE-EEEEETTSCEEEECS
T ss_pred CCCCcEEEEEEcC-CCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcE-EEEEcCCCeEEEEEe
Confidence 4677899999999 688999999999999999985432223556668999999999999988 6 999999999999999
Q ss_pred -CCCceeeeEecc--CCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCC---------CCCCCCCCCCCCCCCceEEEec
Q psy4571 180 -RNLKLKLHSFES--HKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK---------IGEEQSTEDAEDGPPELLFIHG 247 (437)
Q Consensus 180 -~~~~~~~~~~~~--h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~---------~~~~~~~~~~~~~~~~~~~~~~ 247 (437)
.++. ...+.+ |...|.+++|+| +. .+++++.|+.|++||+++ ...... +.
T Consensus 87 ~~~~~--~~~~~~~~~~~~v~~l~~~~-~~-~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~--------------~~ 148 (342)
T 1yfq_A 87 IGSPS--FQALTNNEANLGICRICKYG-DD-KLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNN--------------TK 148 (342)
T ss_dssp SSSSS--EEECBSCCCCSCEEEEEEET-TT-EEEEEETTSEEEEECHHHHTTBCEEEEESCSSS--------------SS
T ss_pred ccCCc--eEeccccCCCCceEEEEeCC-CC-EEEEEcCCCeEEEEcccccccccccccCCeeeE--------------Ee
Confidence 7754 467778 999999999999 76 699999999999999986 433332 33
Q ss_pred CccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCC-CCCceeeeeeecccCCceeeeecC-CCCcccccCCCCccccccc
Q psy4571 248 GHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDST-DSDTKTMRLDSIRSNGGISSTASP-TASSTASESPTPTNSVHEK 325 (437)
Q Consensus 248 ~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~s~-~g~~l~s~s~d~~~~~~~~ 325 (437)
|...|.+++|+|++ +++++.|+.|++||+++ +....... ...+...+..++|+| ++.++++++.++.
T Consensus 149 -~~~~v~~~~~~~~~---l~~~~~d~~i~i~d~~~~~~~~~~~~-~~~~~~~i~~i~~~~~~~~~l~~~~~dg~------ 217 (342)
T 1yfq_A 149 -VKNKIFTMDTNSSR---LIVGMNNSQVQWFRLPLCEDDNGTIE-ESGLKYQIRDVALLPKEQEGYACSSIDGR------ 217 (342)
T ss_dssp -SCCCEEEEEECSSE---EEEEESTTEEEEEESSCCTTCCCEEE-ECSCSSCEEEEEECSGGGCEEEEEETTSE------
T ss_pred -eCCceEEEEecCCc---EEEEeCCCeEEEEECCccccccceee-ecCCCCceeEEEECCCCCCEEEEEecCCc------
Confidence 78899999999886 77999999999999998 55432222 222455677789999 9999999999998
Q ss_pred ccccccccccchhh------hhhhhhcCCCc---------cccccCCCCCCcccccc-------ccccCH
Q psy4571 326 NYWQGLVLFDILVC------EEQRQLLGTEE---------ESSDRHSSDNDTEDLNS-------IWSMTD 373 (437)
Q Consensus 326 ~~~~~i~~wd~~~~------~~~~~~~~h~~---------~~~~~~~~~~~~~~~~~-------~w~~~~ 373 (437)
+++||+..+ +....+.+|.. .+..+.++|++..+++. +|++..
T Consensus 218 -----i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~ 282 (342)
T 1yfq_A 218 -----VAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQT 282 (342)
T ss_dssp -----EEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTT
T ss_pred -----EEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCcc
Confidence 788888777 77777888865 89999999999877664 888754
No 120
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.95 E-value=4.7e-27 Score=220.12 Aligned_cols=238 Identities=10% Similarity=-0.005 Sum_probs=170.2
Q ss_pred eeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeecc-----ccccCCCcceEE
Q psy4571 36 RFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQ-----NFPFPLSRQDVA 110 (437)
Q Consensus 36 ~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~-----~~~~~~~v~~~~ 110 (437)
.|.+++|+ |. +++|+.|+++++|+... .+.+|+....+ ...+...|.+++
T Consensus 78 ~v~~~~~~-~~---~~s~s~D~~i~~w~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 132 (343)
T 3lrv_A 78 NPRTGGEH-PA---IISRGPCNRLLLLYPGN---------------------QITILDSKTNKVLREIEVDSANEIIYMY 132 (343)
T ss_dssp CCCTTCCC-CS---EEEECSTTEEEEEETTT---------------------EEEEEETTTCCEEEEEECCCSSCEEEEE
T ss_pred CceeeeeC-Cc---eEEecCCCeEEEEEccC---------------------ceEEeecCCcceeEEeecCCCCCEEEEE
Confidence 45556666 54 88888888888888654 12233322221 123446799999
Q ss_pred eeCC-CCCEEEEEECCCcEEEEEcCCCCCCCCeeee-ccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeE
Q psy4571 111 WHLL-HESLFGSVADDQKLMIWDTRSHNVSKPSHTV-DAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHS 188 (437)
Q Consensus 111 ~sp~-~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~-~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~ 188 (437)
|+|. ++.+|++|+.||+|++||+++ .+.+... ..|...|.+++|+|++. +|++|+.||.|++||+++++.....
T Consensus 133 ~~~~~~~~~l~s~s~dg~i~~wd~~~---~~~~~~~~~~~~~~i~~~~~~pdg~-~lasg~~dg~i~iwd~~~~~~~~~~ 208 (343)
T 3lrv_A 133 GHNEVNTEYFIWADNRGTIGFQSYED---DSQYIVHSAKSDVEYSSGVLHKDSL-LLALYSPDGILDVYNLSSPDQASSR 208 (343)
T ss_dssp CCC---CCEEEEEETTCCEEEEESSS---SCEEEEECCCSSCCCCEEEECTTSC-EEEEECTTSCEEEEESSCTTSCCEE
T ss_pred cCCCCCCCEEEEEeCCCcEEEEECCC---CcEEEEEecCCCCceEEEEECCCCC-EEEEEcCCCEEEEEECCCCCCCccE
Confidence 9992 367999999999999999984 4445444 34556899999999999 5999999999999999997763367
Q ss_pred ecc-CCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccE--EEEEEccCCCeE
Q psy4571 189 FES-HKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKI--SDFSWNPNEPWV 265 (437)
Q Consensus 189 ~~~-h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v--~~l~~~p~~~~~ 265 (437)
+.. |.++|++++|+|++. .|++++ |+.|++||+++........ .+..|...+ .+++|+|+|+ +
T Consensus 209 ~~~~h~~~v~~l~fs~~g~-~l~s~~-~~~v~iwd~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~g~-~ 274 (343)
T 3lrv_A 209 FPVDEEAKIKEVKFADNGY-WMVVEC-DQTVVCFDLRKDVGTLAYP-----------TYTIPEFKTGTVTYDIDDSGK-N 274 (343)
T ss_dssp CCCCTTSCEEEEEECTTSS-EEEEEE-SSBEEEEETTSSTTCBSSC-----------CCBC-----CCEEEEECTTSS-E
T ss_pred EeccCCCCEEEEEEeCCCC-EEEEEe-CCeEEEEEcCCCCcceeec-----------ccccccccccceEEEECCCCC-E
Confidence 777 999999999999998 588888 5599999999876544321 122233333 4699999999 6
Q ss_pred EEEEeC-CCeEEEEeCCCCCCceeeeeeecccCCceeeeecC---CCCcccccCCCCccccc
Q psy4571 266 ICSVSE-DNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASP---TASSTASESPTPTNSVH 323 (437)
Q Consensus 266 l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~---~g~~l~s~s~d~~~~~~ 323 (437)
+++++. |+.+++|++......... .....+.|+| ++..+++++.|+.+.+.
T Consensus 275 l~~~s~~d~~i~v~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~ 329 (343)
T 3lrv_A 275 MIAYSNESNSLTIYKFDKKTKNWTK-------DEESALCLQSDTADFTDMDVVCGDGGIAAI 329 (343)
T ss_dssp EEEEETTTTEEEEEEECTTTCSEEE-------EEEEECCC----CCCCEEEEEEETTEEEEE
T ss_pred EEEecCCCCcEEEEEEcccccceEe-------cCceeEecCccccccceeEEEecCCceEEE
Confidence 778777 999999999776543322 2234457777 88888888888875443
No 121
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.95 E-value=7.7e-27 Score=225.49 Aligned_cols=280 Identities=10% Similarity=0.013 Sum_probs=205.3
Q ss_pred eEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeCCCC
Q psy4571 37 FYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHLLHE 116 (437)
Q Consensus 37 v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp~~~ 116 (437)
+.+++|+ |.+.++++++.|+.|++|+..++....... . .....+...+.+++|+| ++
T Consensus 125 ~~~~~~s-~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~--~-------------------~~~~~~~~~v~~~~~~~-~~ 181 (433)
T 3bws_A 125 PKSVRFI-DNTRLAIPLLEDEGMDVLDINSGQTVRLSP--P-------------------EKYKKKLGFVETISIPE-HN 181 (433)
T ss_dssp BCCCEES-SSSEEEEEBTTSSSEEEEETTTCCEEEECC--C-------------------HHHHTTCCEEEEEEEGG-GT
T ss_pred ceEEEEe-CCCeEEEEeCCCCeEEEEECCCCeEeeecC--c-------------------ccccccCCceeEEEEcC-CC
Confidence 4456666 466666666666667777766554432210 0 00112345788999988 68
Q ss_pred CEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCce
Q psy4571 117 SLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEI 196 (437)
Q Consensus 117 ~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v 196 (437)
.++++++.|+.|++||++ ..+.+..+..|...+.+++|+|++..++++++.|+.|++||+++++. ...+.. ...+
T Consensus 182 ~~~~s~~~d~~v~~~d~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~-~~~~~~-~~~~ 256 (433)
T 3bws_A 182 ELWVSQMQANAVHVFDLK---TLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLE-IRKTDK-IGLP 256 (433)
T ss_dssp EEEEEEGGGTEEEEEETT---TCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEE-EEECCC-CSEE
T ss_pred EEEEEECCCCEEEEEECC---CceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcE-EEEecC-CCCc
Confidence 899999999999999998 55677778889999999999999997556777899999999998654 555554 4569
Q ss_pred EEEEEcCCCCcEEEEEe--------CCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEE
Q psy4571 197 FQVQWSPHNETILASSG--------TDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICS 268 (437)
Q Consensus 197 ~~v~~~p~~~~~l~sg~--------~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s 268 (437)
.+++|+|+++. +++++ .|+.|++||+++++. +. ...|...+.+++|+|+++.++++
T Consensus 257 ~~~~~~~~g~~-l~~~~~~~~~~~~~dg~i~~~d~~~~~~--------------~~-~~~~~~~~~~~~~~~~g~~l~~~ 320 (433)
T 3bws_A 257 RGLLLSKDGKE-LYIAQFSASNQESGGGRLGIYSMDKEKL--------------ID-TIGPPGNKRHIVSGNTENKIYVS 320 (433)
T ss_dssp EEEEECTTSSE-EEEEEEESCTTCSCCEEEEEEETTTTEE--------------EE-EEEEEECEEEEEECSSTTEEEEE
T ss_pred eEEEEcCCCCE-EEEEECCCCccccCCCeEEEEECCCCcE--------------Ee-eccCCCCcceEEECCCCCEEEEE
Confidence 99999999985 66665 588999999987532 22 23556688999999999878888
Q ss_pred EeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcc----cccccccccccccccchhhhhhhh
Q psy4571 269 VSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTN----SVHEKNYWQGLVLFDILVCEEQRQ 344 (437)
Q Consensus 269 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~----~~~~~~~~~~i~~wd~~~~~~~~~ 344 (437)
++.|+.|++||+++++....+. ....+..++|+|+|+++++++.+... .++.......+++||..+++.+..
T Consensus 321 ~~~~~~v~v~d~~~~~~~~~~~----~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~ 396 (433)
T 3bws_A 321 DMCCSKIEVYDLKEKKVQKSIP----VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEF 396 (433)
T ss_dssp ETTTTEEEEEETTTTEEEEEEE----CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEE
T ss_pred ecCCCEEEEEECCCCcEEEEec----CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEE
Confidence 8999999999999887665554 34556778999999988877653210 011111112389999999998888
Q ss_pred hcCCCccccccCCCCCCcccc
Q psy4571 345 LLGTEEESSDRHSSDNDTEDL 365 (437)
Q Consensus 345 ~~~h~~~~~~~~~~~~~~~~~ 365 (437)
+.++. .+..+.++|+|..++
T Consensus 397 ~~~~~-~~~~~~~s~dg~~l~ 416 (433)
T 3bws_A 397 WEAGN-QPTGLDVSPDNRYLV 416 (433)
T ss_dssp EECSS-SEEEEEECTTSCEEE
T ss_pred ecCCC-CCceEEEcCCCCEEE
Confidence 87754 578889999998665
No 122
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.95 E-value=6.4e-26 Score=205.76 Aligned_cols=213 Identities=8% Similarity=0.054 Sum_probs=156.1
Q ss_pred cccceeEEEEeeCCC----cceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEe---cCceEEEEEeee-ccc----
Q psy4571 32 HSIYRFYRLCVAEPF----DDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCI---LNISILFFEIIF-TQN---- 99 (437)
Q Consensus 32 ~~~~~v~~~~~~~~~----~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~---~~~~i~~~~~~~-~~~---- 99 (437)
+..-.|.+++|+ |+ +..+++++.+ +++|+..+ .+.+..+ .++.|++|++.. ++.
T Consensus 109 ~~~~~v~sla~s-pd~~~~~~~l~s~g~~--~~v~~l~~-----------g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~ 174 (356)
T 2w18_A 109 LEIREIRALFCS-SDDESEKQVLLKSGNI--KAVLGLTK-----------RRLVSSSGTLSDQQVEVMTFAEDGGGKENQ 174 (356)
T ss_dssp SSEEEEEEECC-------CCEEEEEEEEE--EEEEEETT-----------TEEEEEESSSTTCEEEEEEECTTSCEEEEE
T ss_pred ccccceEEEEEC-CCccccccEEEeCCCe--EEEEecCC-----------CcEEEecccCCCCcEEEEEECCCCceeeee
Confidence 445567888888 88 8888888755 77786533 3333333 488999999854 322
Q ss_pred cccCCCcceEEeeCC--CCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCC---CCeEEEEEeCCCCcE----------
Q psy4571 100 FPFPLSRQDVAWHLL--HESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHT---AEVNCLSFNPYSEYI---------- 164 (437)
Q Consensus 100 ~~~~~~v~~~~~sp~--~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~---~~v~~l~~~~~~~~~---------- 164 (437)
..++..++.++|+|. ++.+|++|+.|++|+|||++ +++.++++.+|. ..+.+++|+|+|..+
T Consensus 175 ~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~---TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w 251 (356)
T 2w18_A 175 FLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLK---TGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKE 251 (356)
T ss_dssp EECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETT---TCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------
T ss_pred ccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECC---CCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcc
Confidence 246778899999883 46899999999999999999 567788887654 368888999999853
Q ss_pred -EEEEeCCCeEEEEeCCCCceeeeEe-----ccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCC
Q psy4571 165 -LATGSADKTVALWDLRNLKLKLHSF-----ESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDG 238 (437)
Q Consensus 165 -l~sgs~dg~i~lwd~~~~~~~~~~~-----~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~ 238 (437)
+++|+.|++|++||..+++. +..+ .+|...+.+.+++ +. ++++|+.|++|+|||+.+++
T Consensus 252 ~laSGs~D~tIklWd~~tgk~-l~v~~~~~p~Gh~~~~lsg~~s--g~-~lASgS~DgTIkIWDl~tGk----------- 316 (356)
T 2w18_A 252 SESLRSPVFQLIVINPKTTLS-VGVMLYCLPPGQAGRFLEGDVK--DH-CAAAILTSGTIAIWDLLLGQ----------- 316 (356)
T ss_dssp ------CCEEEEEEETTTTEE-EEEEEECCCTTCCCCEEEEEEE--TT-EEEEEETTSCEEEEETTTCS-----------
T ss_pred eeeccCCCcEEEEEECCCCEE-EEEEEeeccCCCcceeEccccC--CC-EEEEEcCCCcEEEEECCCCc-----------
Confidence 36789999999999998664 4433 3666665555554 55 69999999999999999874
Q ss_pred CCceEEEecCccccEE-EEEEccCCCeEEEEEeCCCeEEEEeC
Q psy4571 239 PPELLFIHGGHTAKIS-DFSWNPNEPWVICSVSEDNIMQEYCD 280 (437)
Q Consensus 239 ~~~~~~~~~~h~~~v~-~l~~~p~~~~~l~s~~~dg~i~iwd~ 280 (437)
++.++.+|...+. .++|+|+|+ +|++|+.|++|++||+
T Consensus 317 ---~l~tL~gH~~~vvs~vafSPDG~-~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 317 ---CTALLPPVSDQHWSFVKWSGTDS-HLLAGQKDGNIFVYHY 355 (356)
T ss_dssp ---EEEEECCC--CCCCEEEECSSSS-EEEEECTTSCEEEEEE
T ss_pred ---EEEEecCCCCCeEEEEEECCCCC-EEEEEECCCcEEEecC
Confidence 4556788877655 689999999 7889999999999985
No 123
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.95 E-value=1.5e-26 Score=220.37 Aligned_cols=247 Identities=11% Similarity=0.084 Sum_probs=193.5
Q ss_pred EEEecCceEEEEEeeeccc---cccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEE
Q psy4571 81 ISCILNISILFFEIIFTQN---FPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSF 157 (437)
Q Consensus 81 i~~~~~~~i~~~~~~~~~~---~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~ 157 (437)
+++..++.|++||+..++. +.....+.+++|+|++..++++++.|+.|++||+. ..+.+..+..+. .+.+++|
T Consensus 6 vs~~~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~---~~~~~~~~~~~~-~v~~~~~ 81 (391)
T 1l0q_A 6 IANSESDNISVIDVTSNKVTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTA---TNNVIATVPAGS-SPQGVAV 81 (391)
T ss_dssp EEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEEGGGTEEEEEETT---TTEEEEEEECSS-SEEEEEE
T ss_pred EEcCCCCEEEEEECCCCeEEEEeecCCCcceEEECCCCCEEEEECCCCCeEEEEECC---CCeEEEEEECCC-CccceEE
Confidence 4566789999999765443 34556789999999544445777799999999998 455566665554 8999999
Q ss_pred eCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCC
Q psy4571 158 NPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAED 237 (437)
Q Consensus 158 ~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~ 237 (437)
+|++++++++++.++.|++||+.+++. +..+. +...+.+++|+|+++.++++++.|+.|++||+.+++.
T Consensus 82 spdg~~l~~~~~~~~~v~v~d~~~~~~-~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~--------- 150 (391)
T 1l0q_A 82 SPDGKQVYVTNMASSTLSVIDTTSNTV-AGTVK-TGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAV--------- 150 (391)
T ss_dssp CTTSSEEEEEETTTTEEEEEETTTTEE-EEEEE-CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE---------
T ss_pred CCCCCEEEEEECCCCEEEEEECCCCeE-EEEEe-CCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcE---------
Confidence 999997556777889999999998654 55555 4467899999999997668899999999999987532
Q ss_pred CCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccC--
Q psy4571 238 GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASES-- 315 (437)
Q Consensus 238 ~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s-- 315 (437)
+..+..+ ..+.+++|+|+++.++++++.|+.|++||+++++....+. +...+..++|+|+|+++++++
T Consensus 151 -----~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~----~~~~~~~~~~~~~g~~l~~~~~~ 220 (391)
T 1l0q_A 151 -----INTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVK----VEAAPSGIAVNPEGTKAYVTNVD 220 (391)
T ss_dssp -----EEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE----CSSEEEEEEECTTSSEEEEEEEC
T ss_pred -----EEEEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEe----cCCCccceEECCCCCEEEEEecC
Confidence 3334444 4579999999999666888999999999999987665554 234566779999999888887
Q ss_pred -CCCcccccccccccccccccchhhhhhhhhcCCCccccccCCCCCCccc
Q psy4571 316 -PTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHSSDNDTED 364 (437)
Q Consensus 316 -~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~~~~~~ 364 (437)
.++. +++||+.+++.+..+..|.. +..+.++|+|..+
T Consensus 221 ~~~~~-----------v~~~d~~~~~~~~~~~~~~~-~~~~~~s~dg~~l 258 (391)
T 1l0q_A 221 KYFNT-----------VSMIDTGTNKITARIPVGPD-PAGIAVTPDGKKV 258 (391)
T ss_dssp SSCCE-----------EEEEETTTTEEEEEEECCSS-EEEEEECTTSSEE
T ss_pred cCCCc-----------EEEEECCCCeEEEEEecCCC-ccEEEEccCCCEE
Confidence 4555 89999999998888888764 6778899998755
No 124
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.94 E-value=6.5e-25 Score=206.50 Aligned_cols=236 Identities=14% Similarity=0.168 Sum_probs=176.2
Q ss_pred cceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEe--
Q psy4571 34 IYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAW-- 111 (437)
Q Consensus 34 ~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~-- 111 (437)
...|.+++|+ |++++|++|+.|+.|++|+..++.+... ..+...|.+++|
T Consensus 86 ~~~v~~~~~~-~~~~~l~s~~~dg~v~iwd~~~~~~~~~---------------------------~~~~~~v~~~~~~~ 137 (368)
T 3mmy_A 86 TGPVLDVCWS-DDGSKVFTASCDKTAKMWDLSSNQAIQI---------------------------AQHDAPVKTIHWIK 137 (368)
T ss_dssp SSCEEEEEEC-TTSSEEEEEETTSEEEEEETTTTEEEEE---------------------------EECSSCEEEEEEEE
T ss_pred cCCEEEEEEC-cCCCEEEEEcCCCcEEEEEcCCCCceee---------------------------ccccCceEEEEEEe
Confidence 4456677777 6777777777777777777665543321 135578899999
Q ss_pred eCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEec-
Q psy4571 112 HLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFE- 190 (437)
Q Consensus 112 sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~- 190 (437)
+| ++.+|++++.||.|++||++ ..+.+..+..+. .+.++.+.+ . .+++++.++.+++|+++..........
T Consensus 138 ~~-~~~~l~~~~~dg~i~vwd~~---~~~~~~~~~~~~-~~~~~~~~~--~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 209 (368)
T 3mmy_A 138 AP-NYSCVMTGSWDKTLKFWDTR---SSNPMMVLQLPE-RCYCADVIY--P-MAVVATAERGLIVYQLENQPSEFRRIES 209 (368)
T ss_dssp CS-SCEEEEEEETTSEEEEECSS---CSSCSEEEECSS-CEEEEEEET--T-EEEEEEGGGCEEEEECSSSCEEEEECCC
T ss_pred CC-CCCEEEEccCCCcEEEEECC---CCcEEEEEecCC-CceEEEecC--C-eeEEEeCCCcEEEEEeccccchhhhccc
Confidence 77 67889999999999999998 456666776654 677777774 4 488999999999999998655333332
Q ss_pred cCCCceEEEEEcCCCC---cEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccc------------cEEE
Q psy4571 191 SHKDEIFQVQWSPHNE---TILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTA------------KISD 255 (437)
Q Consensus 191 ~h~~~v~~v~~~p~~~---~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~------------~v~~ 255 (437)
.+...+.++++.++.. ..+++|+.||.|++||++..... ..+..+.+|.. .|++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~v~~ 278 (368)
T 3mmy_A 210 PLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPA-----------KDNFTFKCHRSNGTNTSAPQDIYAVNG 278 (368)
T ss_dssp SCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHH-----------HHSEEEECSEEC----CCCEEECCEEE
T ss_pred cccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCcc-----------ccceeeeeeecccccccccccccceEE
Confidence 3445566676665543 13889999999999999876321 22344556655 7999
Q ss_pred EEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcc
Q psy4571 256 FSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTN 320 (437)
Q Consensus 256 l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~ 320 (437)
++|+|+++ +|++++.||.|++||+++++++..+.. +...+..++|+|+|++|++++.|+..
T Consensus 279 ~~~sp~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~---~~~~v~~~~~s~~g~~l~~~s~d~~~ 339 (368)
T 3mmy_A 279 IAFHPVHG-TLATVGSDGRFSFWDKDARTKLKTSEQ---LDQPISACCFNHNGNIFAYASSYDWS 339 (368)
T ss_dssp EEECTTTC-CEEEEETTSCEEEEETTTTEEEEECCC---CSSCEEEEEECTTSSCEEEEECCCST
T ss_pred EEEecCCC-EEEEEccCCeEEEEECCCCcEEEEecC---CCCCceEEEECCCCCeEEEEeccccc
Confidence 99999998 788999999999999999877766653 45677788999999999999988763
No 125
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.93 E-value=1.2e-24 Score=204.66 Aligned_cols=251 Identities=12% Similarity=0.045 Sum_probs=180.4
Q ss_pred eecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccc--cCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCC
Q psy4571 62 WKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFP--FPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVS 139 (437)
Q Consensus 62 w~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~--~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~ 139 (437)
.+.|.+.+..+.|++++..++++.+..+++|+........ ....+..+++.+.++.++++|+.|++|++||.. ..
T Consensus 15 ~~~h~~~V~~v~fs~dg~~la~g~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~---~~ 91 (355)
T 3vu4_A 15 ENHVSNPVTDYEFNQDQSCLILSTLKSFEIYNVHPVAHIMSQEMRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDV---KK 91 (355)
T ss_dssp ----CCCCCEEEECTTSSEEEEECSSEEEEEEETTEEEEEEEECSCCCEEEECTTSSEEEEECSSTTEEEEEETT---TT
T ss_pred cccCCCceEEEEECCCCCEEEEEcCCEEEEEecCCcceeeeeecCCeEEEEEcCCCCEEEEEECCccEEEEEECC---CC
Confidence 3567788999999999999988888889999976443321 123688899998544444678888999999998 45
Q ss_pred CCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEE--EeCCCe
Q psy4571 140 KPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILAS--SGTDRR 217 (437)
Q Consensus 140 ~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s--g~~dg~ 217 (437)
+.+..+. |...|.+++|+++. ++++ .|+.|++||+.+....+..+.. +...+++++ .. ++. |+.||.
T Consensus 92 ~~~~~~~-~~~~v~~v~~~~~~---~~~~-~~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~--~~-la~~sg~~~g~ 160 (355)
T 3vu4_A 92 QDVSRIK-VDAPVKDLFLSREF---IVVS-YGDVISVFKFGNPWKRITDDIR---FGGVCEFSN--GL-LVYSNEFNLGQ 160 (355)
T ss_dssp EEEEEEE-CSSCEEEEEECSSE---EEEE-ETTEEEEEESSTTCCBSSCCEE---EEEEEEEET--TE-EEEEESSCTTC
T ss_pred cEEEEEE-CCCceEEEEEcCCE---EEEE-EcCEEEEEECCCCceeeEEecc---CCceEEEEc--cE-EEEeCCCcCcE
Confidence 5666665 66799999999763 3333 4789999999986233555543 455667777 33 444 688999
Q ss_pred EEEEEcCCCCCCCCCCCCC-CCCCce-EEEecCccccEEEEEEccCCCeEEEEEeCCCe-EEEEeCCCCCCceeeeeeec
Q psy4571 218 LHVWDLSKIGEEQSTEDAE-DGPPEL-LFIHGGHTAKISDFSWNPNEPWVICSVSEDNI-MQEYCDSTDSDTKTMRLDSI 294 (437)
Q Consensus 218 i~vwd~~~~~~~~~~~~~~-~~~~~~-~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~-i~iwd~~~~~~~~~~~~~~~ 294 (437)
|++||++++.......... .....+ +..+.+|...|++++|+|+|+ +|++|+.|++ |++||+++++++..+.. ..
T Consensus 161 v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~-~l~s~s~d~~~v~iwd~~~~~~~~~~~~-g~ 238 (355)
T 3vu4_A 161 IHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSD-MVATCSQDGTIIRVFKTEDGVLVREFRR-GL 238 (355)
T ss_dssp EEEEECCC------------------CCEEECCCSSCEEEEEECTTSS-EEEEEETTCSEEEEEETTTCCEEEEEEC-TT
T ss_pred EEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCC-EEEEEeCCCCEEEEEECCCCcEEEEEEc-CC
Confidence 9999998764221100000 000112 566889999999999999999 8999999998 99999999988776642 11
Q ss_pred ccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhh
Q psy4571 295 RSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVC 339 (437)
Q Consensus 295 ~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~ 339 (437)
+...+..++|+|+|+++++++.|++ +++||+..+
T Consensus 239 h~~~v~~~~~s~~~~~l~s~s~d~~-----------v~iw~~~~~ 272 (355)
T 3vu4_A 239 DRADVVDMKWSTDGSKLAVVSDKWT-----------LHVFEIFND 272 (355)
T ss_dssp CCSCEEEEEECTTSCEEEEEETTCE-----------EEEEESSCC
T ss_pred CCCcEEEEEECCCCCEEEEEECCCE-----------EEEEEccCC
Confidence 4566778899999999999999998 788887655
No 126
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.93 E-value=3.9e-24 Score=211.87 Aligned_cols=303 Identities=10% Similarity=0.061 Sum_probs=221.5
Q ss_pred eeCCCcceEEEeeccCceEeeecCCCc----------eeEEEecCCCCeE-EEecCceEEEEEe--eecc---ccccCCC
Q psy4571 42 VAEPFDDAVEERVINEEYKIWKKNTPF----------LYDLVVNNYVANI-SCILNISILFFEI--IFTQ---NFPFPLS 105 (437)
Q Consensus 42 ~~~~~~~~l~tgs~d~~v~iw~~~~~~----------~~~~~~~~~~~~i-~~~~~~~i~~~~~--~~~~---~~~~~~~ 105 (437)
|+ |++.++++++.|++|++||..++. +..+.+++++..+ ++..++.|.+||+ ...+ .++....
T Consensus 145 ~~-p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g~~ 223 (543)
T 1nir_A 145 LD-LPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIE 223 (543)
T ss_dssp CC-GGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTTEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSE
T ss_pred cC-CCCEEEEEEcCCCeEEEEECCCceEEEEEecCcccceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEecCCC
Confidence 66 888999999999999999966543 4556677777766 5667899999998 4433 3445567
Q ss_pred cceEEeeC----CCCCEEEEEE-CCCcEEEEEcCCCCCCCCeeeecc----------CC-CCeEEEEEeCCCCcEEEEEe
Q psy4571 106 RQDVAWHL----LHESLFGSVA-DDQKLMIWDTRSHNVSKPSHTVDA----------HT-AEVNCLSFNPYSEYILATGS 169 (437)
Q Consensus 106 v~~~~~sp----~~~~~l~~~~-~dg~v~vwd~~~~~~~~~~~~~~~----------h~-~~v~~l~~~~~~~~~l~sgs 169 (437)
+..++|+| + ++++++++ .+++|.+||.. ..+++..+.. |. ..+..+.++|++..++++..
T Consensus 224 p~~va~sp~~~~d-g~~l~v~~~~~~~v~v~D~~---t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~ 299 (543)
T 1nir_A 224 ARSVESSKFKGYE-DRYTIAGAYWPPQFAIMDGE---TLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVK 299 (543)
T ss_dssp EEEEEECCSTTCT-TTEEEEEEEESSEEEEEETT---TCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEET
T ss_pred cceEEeCCCcCCC-CCEEEEEEccCCeEEEEecc---ccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEEC
Confidence 78999999 6 45555555 58999999988 4566665543 22 37899999999888888999
Q ss_pred CCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEec--
Q psy4571 170 ADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHG-- 247 (437)
Q Consensus 170 ~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~-- 247 (437)
.++.|.+||..+.+........+...+.+++|+|+|+++++++..+++|.+||+.+++... .+.
T Consensus 300 ~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~--------------~i~~g 365 (543)
T 1nir_A 300 ETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSA--------------LVDVG 365 (543)
T ss_dssp TTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEE--------------EEECS
T ss_pred CCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEE--------------eeccC
Confidence 9999999999886542222224566788999999999867777779999999999864332 232
Q ss_pred --CccccEEEEEEccCCCeEEEEEe-CCCeEEEEeCCC-------CCCceeeeeeecccCCceeeeecCCCCcccccCCC
Q psy4571 248 --GHTAKISDFSWNPNEPWVICSVS-EDNIMQEYCDST-------DSDTKTMRLDSIRSNGGISSTASPTASSTASESPT 317 (437)
Q Consensus 248 --~h~~~v~~l~~~p~~~~~l~s~~-~dg~i~iwd~~~-------~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d 317 (437)
.|.+....+ ++|++..+++++. .|++|.+||+.+ .++++++.. +..+...++++|+|+.|.+++.-
T Consensus 366 ~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~---~g~~~~~v~~~pdg~~l~v~~~~ 441 (543)
T 1nir_A 366 KTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQG---QGGGSLFIKTHPKSSHLYVDTTF 441 (543)
T ss_dssp SSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEEC---SCSCCCCEECCTTCCEEEECCTT
T ss_pred CCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEc---CCCCceEEEcCCCCCcEEEecCC
Confidence 254433333 5787554788876 689999999998 666666654 34566788999999999998731
Q ss_pred Ccccccccccccccccccchhhhhh-hhh--------cCCCccccccCCCCCCcccccccccc
Q psy4571 318 PTNSVHEKNYWQGLVLFDILVCEEQ-RQL--------LGTEEESSDRHSSDNDTEDLNSIWSM 371 (437)
Q Consensus 318 ~~~~~~~~~~~~~i~~wd~~~~~~~-~~~--------~~h~~~~~~~~~~~~~~~~~~~~w~~ 371 (437)
+- +....+.|.+||+.+++.. ..+ ..+...+....++|+|+.+..++|.-
T Consensus 442 ~~----~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~ 500 (543)
T 1nir_A 442 NP----DARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNG 500 (543)
T ss_dssp CS----SHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECC
T ss_pred CC----CcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecC
Confidence 10 0001112899999998876 332 35566788889999999888888854
No 127
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.93 E-value=1e-23 Score=202.46 Aligned_cols=288 Identities=11% Similarity=0.036 Sum_probs=205.6
Q ss_pred eeEEEEeeCCCcceEEEeec----cC----ceEeeec--CCCcee-EEEecCC--------------------------C
Q psy4571 36 RFYRLCVAEPFDDAVEERVI----NE----EYKIWKK--NTPFLY-DLVVNNY--------------------------V 78 (437)
Q Consensus 36 ~v~~~~~~~~~~~~l~tgs~----d~----~v~iw~~--~~~~~~-~~~~~~~--------------------------~ 78 (437)
.+....|.....+.+++|+. || ++++||. .++... ...+..+ .
T Consensus 64 ~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~ 143 (415)
T 2hqs_A 64 EVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFR 143 (415)
T ss_dssp GCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTT
T ss_pred CcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCC
Confidence 45556666444567778873 46 8999999 776643 2222111 2
Q ss_pred CeE-EEecC------ceEEEEEeeeccc---cccCCCcceEEeeCCCCCEEEEEECCC---cEEEEEcCCCCCCCCeeee
Q psy4571 79 ANI-SCILN------ISILFFEIIFTQN---FPFPLSRQDVAWHLLHESLFGSVADDQ---KLMIWDTRSHNVSKPSHTV 145 (437)
Q Consensus 79 ~~i-~~~~~------~~i~~~~~~~~~~---~~~~~~v~~~~~sp~~~~~l~~~~~dg---~v~vwd~~~~~~~~~~~~~ 145 (437)
..+ .+..+ +.|++||...... ..+...+.+++|+| ++..|++++.++ .|++||+.++ +. ..+
T Consensus 144 ~~l~~~s~~~~~~~~~~i~i~d~~g~~~~~l~~~~~~v~~~~~Sp-dg~~la~~s~~~~~~~i~~~d~~tg---~~-~~l 218 (415)
T 2hqs_A 144 TRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQPLMSPAWSP-DGSKLAYVTFESGRSALVIQTLANG---AV-RQV 218 (415)
T ss_dssp CEEEEEEECSSSSCCEEEEEEETTSCSCEEEEEESSCEEEEEECT-TSSEEEEEECTTSSCEEEEEETTTC---CE-EEE
T ss_pred CEEEEEEecCCCCccceEEEEcCCCCCCEEEeCCCCcceeeEEcC-CCCEEEEEEecCCCcEEEEEECCCC---cE-EEe
Confidence 333 33332 7999999753322 23567899999999 678888888875 9999999843 33 356
Q ss_pred ccCCCCeEEEEEeCCCCcEEEEEeCCCe--EEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeC-CC--eEEE
Q psy4571 146 DAHTAEVNCLSFNPYSEYILATGSADKT--VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGT-DR--RLHV 220 (437)
Q Consensus 146 ~~h~~~v~~l~~~~~~~~~l~sgs~dg~--i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~-dg--~i~v 220 (437)
..|.+.+.+++|+|+|+.++++++.|+. |.+||+++++ ...+..|...+.+++|+|+|+. |++++. ++ .|.+
T Consensus 219 ~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~--~~~l~~~~~~~~~~~~spdg~~-l~~~s~~~g~~~i~~ 295 (415)
T 2hqs_A 219 ASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQ--IRQVTDGRSNNTEPTWFPDSQN-LAFTSDQAGRPQVYK 295 (415)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC--EEECCCCSSCEEEEEECTTSSE-EEEEECTTSSCEEEE
T ss_pred ecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCC--EEeCcCCCCcccceEECCCCCE-EEEEECCCCCcEEEE
Confidence 6788899999999999974447777665 9999999855 4567778889999999999996 555554 55 6777
Q ss_pred EEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeC---CCeEEEEeCCCCCCceeeeeeecccC
Q psy4571 221 WDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSE---DNIMQEYCDSTDSDTKTMRLDSIRSN 297 (437)
Q Consensus 221 wd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~---dg~i~iwd~~~~~~~~~~~~~~~~~~ 297 (437)
||+.++.. ..+..|...+.+++|+|+|++ |+.++. +..|++||+.+++.. .+.. ..
T Consensus 296 ~d~~~~~~---------------~~l~~~~~~~~~~~~spdG~~-l~~~~~~~g~~~i~~~d~~~~~~~-~l~~----~~ 354 (415)
T 2hqs_A 296 VNINGGAP---------------QRITWEGSQNQDADVSSDGKF-MVMVSSNGGQQHIAKQDLATGGVQ-VLSS----TF 354 (415)
T ss_dssp EETTSSCC---------------EECCCSSSEEEEEEECTTSSE-EEEEEECSSCEEEEEEETTTCCEE-ECCC----SS
T ss_pred EECCCCCE---------------EEEecCCCcccCeEECCCCCE-EEEEECcCCceEEEEEECCCCCEE-EecC----CC
Confidence 88877532 223456668899999999994 545544 358999999987652 2221 22
Q ss_pred CceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCCccccccCCCCCC
Q psy4571 298 GGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHSSDND 361 (437)
Q Consensus 298 ~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~~~ 361 (437)
....++|+|+|+.+++++.++. ...+++||+. ++..+.+.+|...+...+++|..
T Consensus 355 ~~~~~~~spdg~~l~~~s~~~~--------~~~l~~~d~~-g~~~~~l~~~~~~v~~~~~~~~~ 409 (415)
T 2hqs_A 355 LDETPSLAPNGTMVIYSSSQGM--------GSVLNLVSTD-GRFKARLPATDGQVKFPAWSPYL 409 (415)
T ss_dssp SCEEEEECTTSSEEEEEEEETT--------EEEEEEEETT-SCCEEECCCSSSEEEEEEECCCC
T ss_pred CcCCeEEcCCCCEEEEEEcCCC--------ccEEEEEECC-CCcEEEeeCCCCCCcCCcccccc
Confidence 5677899999999988876552 0128899986 66678899999999999888853
No 128
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.93 E-value=3.9e-24 Score=206.51 Aligned_cols=306 Identities=10% Similarity=0.080 Sum_probs=208.2
Q ss_pred ceeEEecCCcccccceeEEEEeeCCCcc-eEEEeeccCceEeeecC-CCceeEEE---ecCCCCeEEE------------
Q psy4571 21 AFFTWSALPLSHSIYRFYRLCVAEPFDD-AVEERVINEEYKIWKKN-TPFLYDLV---VNNYVANISC------------ 83 (437)
Q Consensus 21 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~l~tgs~d~~v~iw~~~-~~~~~~~~---~~~~~~~i~~------------ 83 (437)
.-++.+..........+..+.|+ |... .+..+......+++... ...++.+. +.+....+.+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 92 (433)
T 3bws_A 14 FSLLSSPINREKNGTEIVKFSIH-PYKGTVIRLGEEILPFKVLEMDKNIALVEMAIPVYKDEKEIELKLSSPGFQNSSYR 92 (433)
T ss_dssp -------------CEEEEEEEEE-CCTTCEEEETTEECCEEEEEEETTEEEEEEEEECCCTTCCEEEEEECTTBCCEEEE
T ss_pred eeeecCccccccCCcEEEEEecc-cccCceEEcCceecceeeeecccCCccEEEEEeeccCCCcEEEEEEccccCcceee
Confidence 33444455555666677778888 5543 33333333334444422 23345555 4444333211
Q ss_pred ---ecCc--eEEEEEee-----eccccccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCee-----eeccC
Q psy4571 84 ---ILNI--SILFFEII-----FTQNFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSH-----TVDAH 148 (437)
Q Consensus 84 ---~~~~--~i~~~~~~-----~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~-----~~~~h 148 (437)
..++ .|..+|.. ....+.....+.+++|+| ++.++++++.++.|++||+.+ .+... .+.+|
T Consensus 93 ~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~s~-~~~~~~~~~~~~~i~~~d~~~---g~~~~~~~~~~~~~~ 168 (433)
T 3bws_A 93 IRKPEELNEKLIALDKEGITHRFISRFKTGFQPKSVRFID-NTRLAIPLLEDEGMDVLDINS---GQTVRLSPPEKYKKK 168 (433)
T ss_dssp ESSGGGGTTCEEECCBTTCSEEEEEEEECSSCBCCCEESS-SSEEEEEBTTSSSEEEEETTT---CCEEEECCCHHHHTT
T ss_pred ecccCCCceEEEEECCCCCcceEEEEEcCCCCceEEEEeC-CCeEEEEeCCCCeEEEEECCC---CeEeeecCccccccc
Confidence 1223 33344431 122344556778999999 788888888899999999984 34444 45588
Q ss_pred CCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCC
Q psy4571 149 TAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGE 228 (437)
Q Consensus 149 ~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~ 228 (437)
.+.|.+++|+|++. ++++++.|+.|++||+++++. ...+..|...+.+++|+|+++.++++++.|+.|++||+++++.
T Consensus 169 ~~~v~~~~~~~~~~-~~~s~~~d~~v~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~ 246 (433)
T 3bws_A 169 LGFVETISIPEHNE-LWVSQMQANAVHVFDLKTLAY-KATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLE 246 (433)
T ss_dssp CCEEEEEEEGGGTE-EEEEEGGGTEEEEEETTTCCE-EEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEE
T ss_pred CCceeEEEEcCCCE-EEEEECCCCEEEEEECCCceE-EEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcE
Confidence 99999999999888 599999999999999998665 6777788999999999999997667777899999999987532
Q ss_pred CCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEe--------CCCeEEEEeCCCCCCceeeeeeecccCCce
Q psy4571 229 EQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVS--------EDNIMQEYCDSTDSDTKTMRLDSIRSNGGI 300 (437)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~--------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 300 (437)
+..+.. ...+.+++|+|+++ .+++++ .|+.|++||+++++....+.. ...+.
T Consensus 247 --------------~~~~~~-~~~~~~~~~~~~g~-~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~----~~~~~ 306 (433)
T 3bws_A 247 --------------IRKTDK-IGLPRGLLLSKDGK-ELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGP----PGNKR 306 (433)
T ss_dssp --------------EEECCC-CSEEEEEEECTTSS-EEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEE----EECEE
T ss_pred --------------EEEecC-CCCceEEEEcCCCC-EEEEEECCCCccccCCCeEEEEECCCCcEEeeccC----CCCcc
Confidence 233434 34689999999999 555665 588999999998866555432 23566
Q ss_pred eeeecCCCCc-ccccCCCCcccccccccccccccccchhhhhhhhhcCCCccccccCCCCCCcccc
Q psy4571 301 SSTASPTASS-TASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHSSDNDTEDL 365 (437)
Q Consensus 301 ~~~~s~~g~~-l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~ 365 (437)
.++|+|+|+. +++++.++. +++||+.+++.+..+. +...+..+.++|+|..+.
T Consensus 307 ~~~~~~~g~~l~~~~~~~~~-----------v~v~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~ 360 (433)
T 3bws_A 307 HIVSGNTENKIYVSDMCCSK-----------IEVYDLKEKKVQKSIP-VFDKPNTIALSPDGKYLY 360 (433)
T ss_dssp EEEECSSTTEEEEEETTTTE-----------EEEEETTTTEEEEEEE-CSSSEEEEEECTTSSEEE
T ss_pred eEEECCCCCEEEEEecCCCE-----------EEEEECCCCcEEEEec-CCCCCCeEEEcCCCCEEE
Confidence 7899999974 466677877 8999999888777665 555688889999987544
No 129
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.91 E-value=2.7e-22 Score=198.66 Aligned_cols=289 Identities=7% Similarity=0.006 Sum_probs=211.7
Q ss_pred eEEEEeeCCCcceEEEeeccCceEeeec--CCCc----------eeEEEecC----CCCeEEEe--cCceEEEEEeeecc
Q psy4571 37 FYRLCVAEPFDDAVEERVINEEYKIWKK--NTPF----------LYDLVVNN----YVANISCI--LNISILFFEIIFTQ 98 (437)
Q Consensus 37 v~~~~~~~~~~~~l~tgs~d~~v~iw~~--~~~~----------~~~~~~~~----~~~~i~~~--~~~~i~~~~~~~~~ 98 (437)
+..++|+ |+++++++++.|++|++||. .++. ...+.+++ ++..+.+. .+++|.+||....+
T Consensus 181 ~~~v~~s-pdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~ 259 (543)
T 1nir_A 181 VHISRMS-ASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLE 259 (543)
T ss_dssp EEEEEEC-TTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCC
T ss_pred cceEEEC-CCCCEEEEECCCCeEEEEECcCCCCcEEEEEecCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccc
Confidence 6788999 99999999999999999998 5433 45667787 77766333 47899999964332
Q ss_pred c---cc-----------cC-CCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCc
Q psy4571 99 N---FP-----------FP-LSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEY 163 (437)
Q Consensus 99 ~---~~-----------~~-~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~ 163 (437)
. +. ++ ..+..+.++|++..++++...++.|.+||+.+..... +..+ .+...+.+++|+|+|++
T Consensus 260 ~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~-~~~i-~~~~~~~~~~~spdg~~ 337 (543)
T 1nir_A 260 PKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLT-VTSI-GAAPFLHDGGWDSSHRY 337 (543)
T ss_dssp EEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCE-EEEE-ECCSSCCCEEECTTSCE
T ss_pred cceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcce-eEEe-ccCcCccCceECCCCCE
Confidence 2 11 11 2678999999777788888889999999998532211 1233 35667889999999998
Q ss_pred EEEEEeCCCeEEEEeCCCCceeeeEecc----CCCceEEEEEcCCCCcEEEEEe-CCCeEEEEEcCCCCCCCCCCCCCCC
Q psy4571 164 ILATGSADKTVALWDLRNLKLKLHSFES----HKDEIFQVQWSPHNETILASSG-TDRRLHVWDLSKIGEEQSTEDAEDG 238 (437)
Q Consensus 164 ~l~sgs~dg~i~lwd~~~~~~~~~~~~~----h~~~v~~v~~~p~~~~~l~sg~-~dg~i~vwd~~~~~~~~~~~~~~~~ 238 (437)
+++++..+++|.+||+++++. ...+.. |.+....+ ++|++..+++++. .|++|.+||+.+..... .
T Consensus 338 l~va~~~~~~v~v~D~~tg~l-~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~-------~ 408 (543)
T 1nir_A 338 FMTAANNSNKVAVIDSKDRRL-SALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQ-------Y 408 (543)
T ss_dssp EEEEEGGGTEEEEEETTTTEE-EEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTT-------T
T ss_pred EEEEecCCCeEEEEECCCCeE-EEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCch-------h
Confidence 666667799999999999765 555543 55444333 5787555788876 68999999998743211 1
Q ss_pred CCceEEEecCccccEEEEEEccCCCeEEEEEe-------CCCeEEEEeCCCCCCc-eeeeee-----ecccCCceeeeec
Q psy4571 239 PPELLFIHGGHTAKISDFSWNPNEPWVICSVS-------EDNIMQEYCDSTDSDT-KTMRLD-----SIRSNGGISSTAS 305 (437)
Q Consensus 239 ~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~-------~dg~i~iwd~~~~~~~-~~~~~~-----~~~~~~~~~~~~s 305 (437)
..+.+.++.+|...+..++++|+++ .|++++ .+++|.+||+.+++.. ..+... ..+...+..++|+
T Consensus 409 ~~~~v~~l~~~g~~~~~v~~~pdg~-~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 487 (543)
T 1nir_A 409 AWKKVAELQGQGGGSLFIKTHPKSS-HLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYN 487 (543)
T ss_dssp BTSEEEEEECSCSCCCCEECCTTCC-EEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEEC
T ss_pred cCeEEEEEEcCCCCceEEEcCCCCC-cEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCC
Confidence 2466788889988889999999999 565655 2779999999999877 333221 1124557778999
Q ss_pred CCCCccccc-----CCCCcccccccccccccccccchhhhhhhhhcCCC
Q psy4571 306 PTASSTASE-----SPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTE 349 (437)
Q Consensus 306 ~~g~~l~s~-----s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~ 349 (437)
|+|+.+..+ +.++. |.+||..|+++++.+....
T Consensus 488 ~~g~~~~~s~~~~~~~~~~-----------i~v~D~~t~~~~~~i~~~~ 525 (543)
T 1nir_A 488 KRGDEVWFSVWNGKNDSSA-----------LVVVDDKTLKLKAVVKDPR 525 (543)
T ss_dssp SSSSEEEEEEECCTTSCCE-----------EEEEETTTTEEEEEECCTT
T ss_pred CCCCEEEEEeecCCCCCCe-----------EEEEECCCceEEEeecCCC
Confidence 999988854 23555 8999999999988887643
No 130
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.90 E-value=2.5e-21 Score=179.84 Aligned_cols=276 Identities=9% Similarity=0.056 Sum_probs=187.3
Q ss_pred EEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeCCCCCEE
Q psy4571 40 LCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHLLHESLF 119 (437)
Q Consensus 40 ~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l 119 (437)
..|......++++++.++.|++|+..++.+......+ ...+ .++|+|++..++
T Consensus 3 ~~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~--------------------------~~~~-~~~~s~dg~~l~ 55 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLG--------------------------YDFV-DTAITSDCSNVV 55 (331)
T ss_dssp ----CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECC--------------------------CCEE-EEEECSSSCEEE
T ss_pred eeEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEcc--------------------------CCcc-eEEEcCCCCEEE
Confidence 3456455666888899999999998887765543211 1234 899999533345
Q ss_pred EEEECCCcEEEEEcCCCCCCCC-eeeeccCCCCeEEEEEeCCCCcEEEEEeCCC---eEEEEeCCCCceeeeEeccCCCc
Q psy4571 120 GSVADDQKLMIWDTRSHNVSKP-SHTVDAHTAEVNCLSFNPYSEYILATGSADK---TVALWDLRNLKLKLHSFESHKDE 195 (437)
Q Consensus 120 ~~~~~dg~v~vwd~~~~~~~~~-~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg---~i~lwd~~~~~~~~~~~~~h~~~ 195 (437)
+++..++.|.+||+.+ .+. ...+..+..+..+++|+|++++ ++++..++ .|.+||+++++. +..+.. ...
T Consensus 56 ~~~~~~~~i~~~d~~~---~~~~~~~~~~~~~~~~~~~~s~dg~~-l~~~~~~~~~~~i~v~d~~~~~~-~~~~~~-~~~ 129 (331)
T 3u4y_A 56 VTSDFCQTLVQIETQL---EPPKVVAIQEGQSSMADVDITPDDQF-AVTVTGLNHPFNMQSYSFLKNKF-ISTIPI-PYD 129 (331)
T ss_dssp EEESTTCEEEEEECSS---SSCEEEEEEECSSCCCCEEECTTSSE-EEECCCSSSSCEEEEEETTTTEE-EEEEEC-CTT
T ss_pred EEeCCCCeEEEEECCC---CceeEEecccCCCCccceEECCCCCE-EEEecCCCCcccEEEEECCCCCe-EEEEEC-CCC
Confidence 5555589999999984 444 5566666666656999999996 66555553 899999998654 555543 455
Q ss_pred eEEEEEcCCCCcEEEEEeCCCe-EEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCe
Q psy4571 196 IFQVQWSPHNETILASSGTDRR-LHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 274 (437)
Q Consensus 196 v~~v~~~p~~~~~l~sg~~dg~-i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~ 274 (437)
..+++|+|+|+++++++..++. |.+|++......... . .... .....+..++|+|+|+++++++..++.
T Consensus 130 ~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~--------~-~~~~-~~~~~~~~~~~spdg~~l~v~~~~~~~ 199 (331)
T 3u4y_A 130 AVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDT--------G-QEFI-SGGTRPFNITFTPDGNFAFVANLIGNS 199 (331)
T ss_dssp EEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEE--------E-EEEE-CSSSSEEEEEECTTSSEEEEEETTTTE
T ss_pred ccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeec--------C-Cccc-cCCCCccceEECCCCCEEEEEeCCCCe
Confidence 6999999999877777777788 999999864322110 0 1111 334457999999999977777778999
Q ss_pred EEEEeCCCCCC---ceeeeeeecccCCceeeeecCCCCcccccC-CCCcccccccccccccccccchhhhh--hhhhcCC
Q psy4571 275 MQEYCDSTDSD---TKTMRLDSIRSNGGISSTASPTASSTASES-PTPTNSVHEKNYWQGLVLFDILVCEE--QRQLLGT 348 (437)
Q Consensus 275 i~iwd~~~~~~---~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s-~d~~~~~~~~~~~~~i~~wd~~~~~~--~~~~~~h 348 (437)
|++||+.+++. +..+. ....+..++|+|+|++++.+. .++. +.+||..+++. +..+..+
T Consensus 200 v~v~d~~~~~~~~~~~~~~----~~~~~~~~~~spdg~~l~v~~~~~~~-----------i~~~d~~~~~~~~~~~~~~~ 264 (331)
T 3u4y_A 200 IGILETQNPENITLLNAVG----TNNLPGTIVVSRDGSTVYVLTESTVD-----------VFNFNQLSGTLSFVKSFGHG 264 (331)
T ss_dssp EEEEECSSTTSCEEEEEEE----CSSCCCCEEECTTSSEEEEECSSEEE-----------EEEEETTTTEEEEEEEEECC
T ss_pred EEEEECCCCcccceeeecc----CCCCCceEEECCCCCEEEEEEcCCCE-----------EEEEECCCCceeeecccccc
Confidence 99999999887 44443 234566789999999766554 3444 78899988876 3332222
Q ss_pred ----Cccc---cccCCCCCCcccccc--------ccccCH
Q psy4571 349 ----EEES---SDRHSSDNDTEDLNS--------IWSMTD 373 (437)
Q Consensus 349 ----~~~~---~~~~~~~~~~~~~~~--------~w~~~~ 373 (437)
.... ..+.++|+|..+... +|++..
T Consensus 265 ~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~ 304 (331)
T 3u4y_A 265 LLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISG 304 (331)
T ss_dssp CCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTS
T ss_pred cccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecC
Confidence 2222 235889999865432 677643
No 131
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.89 E-value=5.6e-21 Score=178.87 Aligned_cols=271 Identities=8% Similarity=0.027 Sum_probs=191.1
Q ss_pred eeEEEEeeCCCcceEEEeec-------cCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcce
Q psy4571 36 RFYRLCVAEPFDDAVEERVI-------NEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQD 108 (437)
Q Consensus 36 ~v~~~~~~~~~~~~l~tgs~-------d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~ 108 (437)
+++.++|+ |+++.+++++. ++.|.+|+..++.+.... .....+..
T Consensus 42 ~~~~~~~s-~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~---------------------------~~~~~~~~ 93 (353)
T 3vgz_A 42 GAYEMAYS-QQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAI---------------------------HNDLKPFG 93 (353)
T ss_dssp SEEEEEEE-TTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEE---------------------------EESSCCCS
T ss_pred CccceEEC-CCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEE---------------------------ecCCCcce
Confidence 45566777 66666666553 446667766555443322 12234678
Q ss_pred EEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCC---------CeEEEEEeCCCCcEEEEE-eCCCeEEEEe
Q psy4571 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTA---------EVNCLSFNPYSEYILATG-SADKTVALWD 178 (437)
Q Consensus 109 ~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~---------~v~~l~~~~~~~~~l~sg-s~dg~i~lwd 178 (437)
++|+|++..++++...++.|.+||.. ..+.+..+..+.. .+.+++|+|+++++++++ +.++.|.+||
T Consensus 94 ~~~s~dg~~l~v~~~~~~~v~~~d~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d 170 (353)
T 3vgz_A 94 ATINNTTQTLWFGNTVNSAVTAIDAK---TGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVD 170 (353)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETT---TCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEE
T ss_pred EEECCCCCEEEEEecCCCEEEEEeCC---CCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEc
Confidence 99999544466666668999999998 4455555554432 278999999999744444 3588999999
Q ss_pred CCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEE
Q psy4571 179 LRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 258 (437)
Q Consensus 179 ~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~ 258 (437)
.++++. ...+..+...+.+++|+|+++. +++++.++.|.+||+.+++...... ....++...+.+++|
T Consensus 171 ~~~~~~-~~~~~~~~~~~~~~~~s~dg~~-l~~~~~~~~i~~~d~~~~~~~~~~~----------~~~~~~~~~~~~~~~ 238 (353)
T 3vgz_A 171 GGNIKL-KTAIQNTGKMSTGLALDSEGKR-LYTTNADGELITIDTADNKILSRKK----------LLDDGKEHFFINISL 238 (353)
T ss_dssp TTTTEE-EEEECCCCTTCCCCEEETTTTE-EEEECTTSEEEEEETTTTEEEEEEE----------CCCSSSCCCEEEEEE
T ss_pred CCCCce-EEEecCCCCccceEEECCCCCE-EEEEcCCCeEEEEECCCCeEEEEEE----------cCCCCCCcccceEEE
Confidence 998665 5666545666889999999985 7777889999999998764322200 001134557889999
Q ss_pred ccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccc-cCCCCcccccccccccccccccch
Q psy4571 259 NPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTAS-ESPTPTNSVHEKNYWQGLVLFDIL 337 (437)
Q Consensus 259 ~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s-~s~d~~~~~~~~~~~~~i~~wd~~ 337 (437)
+|+++.++++...++.|.+||..+++....+... ....++|+|+|+.++. ...++. +.+||..
T Consensus 239 s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-----~~~~~~~s~dg~~l~v~~~~~~~-----------v~~~d~~ 302 (353)
T 3vgz_A 239 DTARQRAFITDSKAAEVLVVDTRNGNILAKVAAP-----ESLAVLFNPARNEAYVTHRQAGK-----------VSVIDAK 302 (353)
T ss_dssp ETTTTEEEEEESSSSEEEEEETTTCCEEEEEECS-----SCCCEEEETTTTEEEEEETTTTE-----------EEEEETT
T ss_pred CCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcC-----CCceEEECCCCCEEEEEECCCCe-----------EEEEECC
Confidence 9999966666667799999999998877766542 2356799999995544 445666 8999999
Q ss_pred hhhhhhhhcCCCccccccCCCCCCccccc
Q psy4571 338 VCEEQRQLLGTEEESSDRHSSDNDTEDLN 366 (437)
Q Consensus 338 ~~~~~~~~~~h~~~~~~~~~~~~~~~~~~ 366 (437)
+++.+..+.... ....+.++|+|+.+..
T Consensus 303 ~~~~~~~~~~~~-~~~~~~~s~dg~~l~v 330 (353)
T 3vgz_A 303 SYKVVKTFDTPT-HPNSLALSADGKTLYV 330 (353)
T ss_dssp TTEEEEEEECCS-EEEEEEECTTSCEEEE
T ss_pred CCeEEEEEecCC-CCCeEEEcCCCCEEEE
Confidence 998887776654 5678889999975444
No 132
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.89 E-value=7.2e-22 Score=203.90 Aligned_cols=294 Identities=8% Similarity=0.015 Sum_probs=206.2
Q ss_pred ccceeEEEEeeCCCcceEEEeec-cC-----ceEeeecCCCc-----------------------------------eeE
Q psy4571 33 SIYRFYRLCVAEPFDDAVEERVI-NE-----EYKIWKKNTPF-----------------------------------LYD 71 (437)
Q Consensus 33 ~~~~v~~~~~~~~~~~~l~tgs~-d~-----~v~iw~~~~~~-----------------------------------~~~ 71 (437)
....+.+++|+ |+++.|++++. |+ .|++|+..++. +..
T Consensus 35 ~~~~~~~~~~S-pdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 113 (741)
T 2ecf_A 35 SGPTLMKPKVA-PDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVD 113 (741)
T ss_dssp TCCCCEEEEEC-TTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCC
T ss_pred CCCCCCCceEe-cCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcce
Confidence 34568899999 99999999998 88 89999976543 345
Q ss_pred EEecCCCCeEEEecCceEEEEEeeec---cccc---cCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeee
Q psy4571 72 LVVNNYVANISCILNISILFFEIIFT---QNFP---FPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTV 145 (437)
Q Consensus 72 ~~~~~~~~~i~~~~~~~i~~~~~~~~---~~~~---~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~ 145 (437)
+.|++++..+....++.|.+||+..+ .... +...+.+++|+| +++.|+.++ ++.|++||+.+ .+.....
T Consensus 114 ~~~SpDg~~l~~~~~~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SP-DG~~la~~~-~~~i~~~d~~~---g~~~~~~ 188 (741)
T 2ecf_A 114 YQWSPDAQRLLFPLGGELYLYDLKQEGKAAVRQLTHGEGFATDAKLSP-KGGFVSFIR-GRNLWVIDLAS---GRQMQLT 188 (741)
T ss_dssp CEECTTSSEEEEEETTEEEEEESSSCSTTSCCBCCCSSSCEEEEEECT-TSSEEEEEE-TTEEEEEETTT---TEEEECC
T ss_pred eEECCCCCEEEEEeCCcEEEEECCCCCcceEEEcccCCcccccccCCC-CCCEEEEEe-CCcEEEEecCC---CCEEEec
Confidence 66788888887777799999998766 3222 345789999999 678888777 56899999984 2333332
Q ss_pred ccCCCC----------------eEEEEEeCCCCcEEEEEeCCC---------------------------------eEEE
Q psy4571 146 DAHTAE----------------VNCLSFNPYSEYILATGSADK---------------------------------TVAL 176 (437)
Q Consensus 146 ~~h~~~----------------v~~l~~~~~~~~~l~sgs~dg---------------------------------~i~l 176 (437)
..+... +.+++|+|||++ |++++.|+ .|.+
T Consensus 189 ~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~-l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~ 267 (741)
T 2ecf_A 189 ADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSA-IAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGV 267 (741)
T ss_dssp CCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSC-EEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEE
T ss_pred cCCccceeccccceeeeeccccccceEECCCCCE-EEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEE
Confidence 233322 478999999997 77777665 7899
Q ss_pred EeCCC-CceeeeEec--cCCCceEEEEEcCCCCcEEEEEe----CCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCc
Q psy4571 177 WDLRN-LKLKLHSFE--SHKDEIFQVQWSPHNETILASSG----TDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGH 249 (437)
Q Consensus 177 wd~~~-~~~~~~~~~--~h~~~v~~v~~~p~~~~~l~sg~----~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h 249 (437)
||+.+ ++. ..... .|...+..++| |+|+.+++++. .+..|++||+.+++... ....+
T Consensus 268 ~d~~~~~~~-~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~--------------~~~~~ 331 (741)
T 2ecf_A 268 ISPAEQAQT-QWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRV--------------LAHET 331 (741)
T ss_dssp ECSSTTCCC-EEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEE--------------EEEEE
T ss_pred EECCCCCce-EEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEE--------------EEEcC
Confidence 99987 664 22222 47788999999 99996443332 35679999998864321 22222
Q ss_pred cc----cEEEEEEccCCCeEEEEEeCCCeEEEEeCC-CCCCceeeeeeecccCCceee-eecCCCCccc-ccCCCC--cc
Q psy4571 250 TA----KISDFSWNPNEPWVICSVSEDNIMQEYCDS-TDSDTKTMRLDSIRSNGGISS-TASPTASSTA-SESPTP--TN 320 (437)
Q Consensus 250 ~~----~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~-~~s~~g~~l~-s~s~d~--~~ 320 (437)
.. .+..++|+|+|+ ++++++.||.+++|.+. .++ ...+.. +...+..+ .|+|+|+.++ +++.++ .
T Consensus 332 ~~~~~~~~~~~~~spdg~-~~~~~~~~g~~~l~~~~~~~~-~~~l~~---~~~~v~~~~~~s~dg~~l~~~~~~~~~~~- 405 (741)
T 2ecf_A 332 SPTWVPLHNSLRFLDDGS-ILWSSERTGFQHLYRIDSKGK-AAALTH---GNWSVDELLAVDEKAGLAYFRAGIESARE- 405 (741)
T ss_dssp CSSCCCCCSCCEECTTSC-EEEEECTTSSCEEEEECSSSC-EEESCC---SSSCEEEEEEEETTTTEEEEEECSSCTTC-
T ss_pred CCCcCCcCCceEECCCCe-EEEEecCCCccEEEEEcCCCC-eeeeee---cceEEEeEeEEeCCCCEEEEEEeCCCCce-
Confidence 22 346789999999 88899999988888776 333 333321 22334444 5999998765 444443 4
Q ss_pred cccccccccccccccchh-hhhhhhhcCCCccccccCCCCCCccccc
Q psy4571 321 SVHEKNYWQGLVLFDILV-CEEQRQLLGTEEESSDRHSSDNDTEDLN 366 (437)
Q Consensus 321 ~~~~~~~~~~i~~wd~~~-~~~~~~~~~h~~~~~~~~~~~~~~~~~~ 366 (437)
+++|++.. ++....+.+ ...+..+.++|+|..++.
T Consensus 406 ----------~~l~~~~~~g~~~~~l~~-~~~~~~~~~spdg~~l~~ 441 (741)
T 2ecf_A 406 ----------SQIYAVPLQGGQPQRLSK-APGMHSASFARNASVYVD 441 (741)
T ss_dssp ----------BEEEEEETTCCCCEECCC-SCSEEEEEECTTSSEEEE
T ss_pred ----------EEEEEEEcCCCCeeeccc-CCCceEEEECCCCCEEEE
Confidence 67888865 555666666 445678889999987654
No 133
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.89 E-value=2.1e-21 Score=176.53 Aligned_cols=247 Identities=11% Similarity=-0.011 Sum_probs=169.7
Q ss_pred eeccCceEeeecCC----------CceeEEEecCCCCeEEEecCceEEEEEeee-cccccc-----CCCcceEEeeCCCC
Q psy4571 53 RVINEEYKIWKKNT----------PFLYDLVVNNYVANISCILNISILFFEIIF-TQNFPF-----PLSRQDVAWHLLHE 116 (437)
Q Consensus 53 gs~d~~v~iw~~~~----------~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~-~~~~~~-----~~~v~~~~~sp~~~ 116 (437)
++.|+++++|+..+ +.+..+.+++.+..+.+..++.|.+||+.. .+.... ...+.+++|+| ++
T Consensus 18 ~~~~~~i~~~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~sp-dg 96 (297)
T 2ojh_A 18 GSMRSSIEIFNIRTRKMRVVWQTPELFEAPNWSPDGKYLLLNSEGLLYRLSLAGDPSPEKVDTGFATICNNDHGISP-DG 96 (297)
T ss_dssp CCCCEEEEEEETTTTEEEEEEEESSCCEEEEECTTSSEEEEEETTEEEEEESSSCCSCEECCCTTCCCBCSCCEECT-TS
T ss_pred CCcceeEEEEeCCCCceeeeccCCcceEeeEECCCCCEEEEEcCCeEEEEeCCCCCCceEeccccccccccceEECC-CC
Confidence 44566666666433 335566677777777666677788887665 432221 24678999999 67
Q ss_pred CEEEEEE--CCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCC
Q psy4571 117 SLFGSVA--DDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKD 194 (437)
Q Consensus 117 ~~l~~~~--~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~ 194 (437)
.+|++++ .++...||.++.. . .....+..+ ..+.+++|+|+++.++++++.|+.+++|+++........+..+..
T Consensus 97 ~~l~~~~~~~~~~~~l~~~~~~-~-~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 173 (297)
T 2ojh_A 97 ALYAISDKVEFGKSAIYLLPST-G-GTPRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEG 173 (297)
T ss_dssp SEEEEEECTTTSSCEEEEEETT-C-CCCEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSS
T ss_pred CEEEEEEeCCCCcceEEEEECC-C-CceEEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCC
Confidence 8888888 3355666655421 1 223344333 358999999999975558889999999996533333556677888
Q ss_pred ceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCC--
Q psy4571 195 EIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED-- 272 (437)
Q Consensus 195 ~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~d-- 272 (437)
.+.+++|+|+++.+++++..++.+++|++.... ..+..+..|...+.+++|+|+++ .|+.++.+
T Consensus 174 ~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~-------------~~~~~~~~~~~~~~~~~~s~dg~-~l~~~~~~~~ 239 (297)
T 2ojh_A 174 RNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDG-------------SSVERITDSAYGDWFPHPSPSGD-KVVFVSYDAD 239 (297)
T ss_dssp CEEEEEECTTSSEEEEEECTTSSCEEEEEETTS-------------SCEEECCCCSEEEEEEEECTTSS-EEEEEEEETT
T ss_pred ccccceECCCCCEEEEEecCCCCccEEEECCCC-------------CCcEEEecCCcccCCeEECCCCC-EEEEEEcCCC
Confidence 999999999999655555568999999986321 12344566778899999999999 45555544
Q ss_pred ---------CeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCC
Q psy4571 273 ---------NIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTP 318 (437)
Q Consensus 273 ---------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~ 318 (437)
+.|++||+.+++........ .+......++|+|+|+.+++++.+.
T Consensus 240 ~~~~~~~~~~~l~~~d~~~~~~~~~~~~~-~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 240 VFDHPRDLDVRVQLMDMDGGNVETLFDLF-GGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp CCSCCSSEEEEEEEEETTSCSCEEEEEEE-ESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred CCcccccCceEEEEEecCCCCceeeeccC-CCCcccccceECCCCCEEEEEEecc
Confidence 57999999987654433321 2345566789999999998887554
No 134
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.89 E-value=3e-22 Score=192.26 Aligned_cols=242 Identities=11% Similarity=0.026 Sum_probs=175.4
Q ss_pred eEEEEEe--eecccc------ccCCCcceEEeeCC-------------CCCEEEEEECC------CcEEEEEcCCCCCCC
Q psy4571 88 SILFFEI--IFTQNF------PFPLSRQDVAWHLL-------------HESLFGSVADD------QKLMIWDTRSHNVSK 140 (437)
Q Consensus 88 ~i~~~~~--~~~~~~------~~~~~v~~~~~sp~-------------~~~~l~~~~~d------g~v~vwd~~~~~~~~ 140 (437)
.+++||+ ..++.+ .+...+..+++++. .+..++.++.+ +.|++||+.. .
T Consensus 94 ~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g----~ 169 (415)
T 2hqs_A 94 AYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDG----Y 169 (415)
T ss_dssp EEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTS----C
T ss_pred EEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCC----C
Confidence 8999999 655432 12334555655541 14455555544 7999999972 3
Q ss_pred CeeeeccCCCCeEEEEEeCCCCcEEEEEeCCC---eEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCe
Q psy4571 141 PSHTVDAHTAEVNCLSFNPYSEYILATGSADK---TVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRR 217 (437)
Q Consensus 141 ~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg---~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~ 217 (437)
....+.+|...+.+++|+|+|++ |++++.++ .|++||+++++. ..+..|...+.+++|+|+|+.++++++.|+.
T Consensus 170 ~~~~l~~~~~~v~~~~~Spdg~~-la~~s~~~~~~~i~~~d~~tg~~--~~l~~~~~~~~~~~~spdg~~la~~~~~~g~ 246 (415)
T 2hqs_A 170 NQFVVHRSPQPLMSPAWSPDGSK-LAYVTFESGRSALVIQTLANGAV--RQVASFPRHNGAPAFSPDGSKLAFALSKTGS 246 (415)
T ss_dssp SCEEEEEESSCEEEEEECTTSSE-EEEEECTTSSCEEEEEETTTCCE--EEEECCSSCEEEEEECTTSSEEEEEECTTSS
T ss_pred CCEEEeCCCCcceeeEEcCCCCE-EEEEEecCCCcEEEEEECCCCcE--EEeecCCCcccCEEEcCCCCEEEEEEecCCC
Confidence 45677788999999999999996 88888875 999999998664 3566788899999999999975557776665
Q ss_pred --EEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeC-CC--eEEEEeCCCCCCceeeeee
Q psy4571 218 --LHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSE-DN--IMQEYCDSTDSDTKTMRLD 292 (437)
Q Consensus 218 --i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~-dg--~i~iwd~~~~~~~~~~~~~ 292 (437)
|++||+.++.. ..+..|...+.+++|+|+|+. |+.++. ++ .|++||+.+++.. .+..
T Consensus 247 ~~i~~~d~~~~~~---------------~~l~~~~~~~~~~~~spdg~~-l~~~s~~~g~~~i~~~d~~~~~~~-~l~~- 308 (415)
T 2hqs_A 247 LNLYVMDLASGQI---------------RQVTDGRSNNTEPTWFPDSQN-LAFTSDQAGRPQVYKVNINGGAPQ-RITW- 308 (415)
T ss_dssp CEEEEEETTTCCE---------------EECCCCSSCEEEEEECTTSSE-EEEEECTTSSCEEEEEETTSSCCE-ECCC-
T ss_pred ceEEEEECCCCCE---------------EeCcCCCCcccceEECCCCCE-EEEEECCCCCcEEEEEECCCCCEE-EEec-
Confidence 99999987532 335677888999999999994 555554 55 6888899887532 2221
Q ss_pred ecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCCccccccCCCCCCccccc
Q psy4571 293 SIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHSSDNDTEDLN 366 (437)
Q Consensus 293 ~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~ 366 (437)
+......++|+|+|++++.++.+.. ...+++||+.+++. ..+..+. .+....++|+|..++.
T Consensus 309 --~~~~~~~~~~spdG~~l~~~~~~~g--------~~~i~~~d~~~~~~-~~l~~~~-~~~~~~~spdg~~l~~ 370 (415)
T 2hqs_A 309 --EGSQNQDADVSSDGKFMVMVSSNGG--------QQHIAKQDLATGGV-QVLSSTF-LDETPSLAPNGTMVIY 370 (415)
T ss_dssp --SSSEEEEEEECTTSSEEEEEEECSS--------CEEEEEEETTTCCE-EECCCSS-SCEEEEECTTSSEEEE
T ss_pred --CCCcccCeEECCCCCEEEEEECcCC--------ceEEEEEECCCCCE-EEecCCC-CcCCeEEcCCCCEEEE
Confidence 2334556799999999988775421 11289999998876 4566665 6888899999986543
No 135
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.89 E-value=4.5e-22 Score=180.96 Aligned_cols=259 Identities=13% Similarity=0.107 Sum_probs=179.7
Q ss_pred ecCceEEEEEeeeccc---cccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccC-CCCeEEEEEeC
Q psy4571 84 ILNISILFFEIIFTQN---FPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAH-TAEVNCLSFNP 159 (437)
Q Consensus 84 ~~~~~i~~~~~~~~~~---~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h-~~~v~~l~~~~ 159 (437)
..++.|.+||....+. ..+...+.+++|+| ++.+|++++ ++.|++||+.+. .+.......+ ...+.+++|+|
T Consensus 19 ~~~~~i~~~d~~~~~~~~~~~~~~~v~~~~~sp-dg~~l~~~~-~~~i~~~d~~~~--~~~~~~~~~~~~~~~~~~~~sp 94 (297)
T 2ojh_A 19 SMRSSIEIFNIRTRKMRVVWQTPELFEAPNWSP-DGKYLLLNS-EGLLYRLSLAGD--PSPEKVDTGFATICNNDHGISP 94 (297)
T ss_dssp CCCEEEEEEETTTTEEEEEEEESSCCEEEEECT-TSSEEEEEE-TTEEEEEESSSC--CSCEECCCTTCCCBCSCCEECT
T ss_pred CcceeEEEEeCCCCceeeeccCCcceEeeEECC-CCCEEEEEc-CCeEEEEeCCCC--CCceEeccccccccccceEECC
Confidence 4678899999754432 34577899999999 678888876 789999999840 3444444455 36789999999
Q ss_pred CCCcEEEEEe--CCCeEEEEe--CCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCC
Q psy4571 160 YSEYILATGS--ADKTVALWD--LRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDA 235 (437)
Q Consensus 160 ~~~~~l~sgs--~dg~i~lwd--~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~ 235 (437)
+++. |++++ .++...||. ..+.. ...+..+ ..+..++|+|+++.++++++.|+.+++|+++....
T Consensus 95 dg~~-l~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~------- 163 (297)
T 2ojh_A 95 DGAL-YAISDKVEFGKSAIYLLPSTGGT--PRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSG------- 163 (297)
T ss_dssp TSSE-EEEEECTTTSSCEEEEEETTCCC--CEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTC-------
T ss_pred CCCE-EEEEEeCCCCcceEEEEECCCCc--eEEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCC-------
Confidence 9996 77777 334555554 44433 4444433 45899999999997666888899999999754221
Q ss_pred CCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCC-CCCCceeeeeeecccCCceeeeecCCCCccccc
Q psy4571 236 EDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDS-TDSDTKTMRLDSIRSNGGISSTASPTASSTASE 314 (437)
Q Consensus 236 ~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~ 314 (437)
....+..|...+.+++|+|+++.+++++..++.+++|++. .+.....+.. +......++|+|+|++++.+
T Consensus 164 ------~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~---~~~~~~~~~~s~dg~~l~~~ 234 (297)
T 2ojh_A 164 ------VETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITD---SAYGDWFPHPSPSGDKVVFV 234 (297)
T ss_dssp ------CEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCC---CSEEEEEEEECTTSSEEEEE
T ss_pred ------cceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEec---CCcccCCeEECCCCCEEEEE
Confidence 1233556778899999999999555555579999999986 3434333322 23345567999999999888
Q ss_pred CCCCcccccccccccccccccchhhhhh--hhhcCCCccccccCCCCCCccccc
Q psy4571 315 SPTPTNSVHEKNYWQGLVLFDILVCEEQ--RQLLGTEEESSDRHSSDNDTEDLN 366 (437)
Q Consensus 315 s~d~~~~~~~~~~~~~i~~wd~~~~~~~--~~~~~h~~~~~~~~~~~~~~~~~~ 366 (437)
+.++............+.+||+.+++.. ..+.+|...+..+.++|+|..++.
T Consensus 235 ~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~ 288 (297)
T 2ojh_A 235 SYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAY 288 (297)
T ss_dssp EEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEE
T ss_pred EcCCCCCcccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEE
Confidence 7653211111111123899999888763 334578888999999999986553
No 136
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.88 E-value=9.7e-21 Score=176.31 Aligned_cols=260 Identities=9% Similarity=0.093 Sum_probs=166.1
Q ss_pred eEEEeeccCceEeeecC-C------------CceeEEEecCCCCeEE-EecC-ceEEEEEee--ecc-----ccccCCCc
Q psy4571 49 AVEERVINEEYKIWKKN-T------------PFLYDLVVNNYVANIS-CILN-ISILFFEII--FTQ-----NFPFPLSR 106 (437)
Q Consensus 49 ~l~tgs~d~~v~iw~~~-~------------~~~~~~~~~~~~~~i~-~~~~-~~i~~~~~~--~~~-----~~~~~~~v 106 (437)
++++++.|+.|++|+.. + +.+..+.+++.+..+. +..+ +.|.+|++. .+. .+.....+
T Consensus 7 l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 86 (343)
T 1ri6_A 7 VYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSL 86 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCC
T ss_pred EEEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCCCC
Confidence 44445778888888753 1 2234455667766553 3333 788888875 221 22334578
Q ss_pred ceEEeeCCCCCEEEEEE-CCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEe-CCCeEEEEeCCC-Cc
Q psy4571 107 QDVAWHLLHESLFGSVA-DDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGS-ADKTVALWDLRN-LK 183 (437)
Q Consensus 107 ~~~~~sp~~~~~l~~~~-~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs-~dg~i~lwd~~~-~~ 183 (437)
..++|+| ++..+++++ .++.|.+||+..+...+....+..+ ..+.+++|+|++++ +++++ .++.|.+||+.+ ++
T Consensus 87 ~~~~~s~-dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~-l~~~~~~~~~v~~~d~~~~~~ 163 (343)
T 1ri6_A 87 THISTDH-QGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGL-DGCHSANISPDNRT-LWVPALKQDRICLFTVSDDGH 163 (343)
T ss_dssp SEEEECT-TSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCC-TTBCCCEECTTSSE-EEEEEGGGTEEEEEEECTTSC
T ss_pred cEEEEcC-CCCEEEEEecCCCeEEEEECCCCccccccccccCC-CCceEEEECCCCCE-EEEecCCCCEEEEEEecCCCc
Confidence 9999999 566555554 5889999999522123344444433 45889999999997 55555 899999999987 43
Q ss_pred eee-e--Eecc-CCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEec-C--ccccEEEE
Q psy4571 184 LKL-H--SFES-HKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHG-G--HTAKISDF 256 (437)
Q Consensus 184 ~~~-~--~~~~-h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~-~--h~~~v~~l 256 (437)
... . .... ....+..++|+|+++++++++..++.|.+|++......... ...+.... + ....+.++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~-------~~~~~~~~~~~~~~~~~~~i 236 (343)
T 1ri6_A 164 LVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIEC-------VQTLDMMPENFSDTRWAADI 236 (343)
T ss_dssp EEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEE-------EEEEECSCTTCCSCCCEEEE
T ss_pred eeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEE-------EeeccccCccccccCCccce
Confidence 211 1 2222 34578899999999976667668999999999642211100 00011111 1 13457789
Q ss_pred EEccCCCeEEEEEeCCCeEEEEeCCCCC-CceeeeeeecccCCceeeeecCCCCcccccC-CCCc
Q psy4571 257 SWNPNEPWVICSVSEDNIMQEYCDSTDS-DTKTMRLDSIRSNGGISSTASPTASSTASES-PTPT 319 (437)
Q Consensus 257 ~~~p~~~~~l~s~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s-~d~~ 319 (437)
+|+|+|+++++++..++.|++||+.... ....+.... ....+..++|+|+|+++++++ .++.
T Consensus 237 ~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~ 300 (343)
T 1ri6_A 237 HITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQP-TETQPRGFNVDHSGKYLIAAGQKSHH 300 (343)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEE-CSSSCCCEEECTTSSEEEEECTTTCE
T ss_pred EECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeec-CCCccceEEECCCCCEEEEecCCCCe
Confidence 9999999677677789999999998311 122222111 123366789999999887776 4566
No 137
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.88 E-value=8.3e-22 Score=190.01 Aligned_cols=228 Identities=14% Similarity=0.140 Sum_probs=156.3
Q ss_pred ccceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEee
Q psy4571 33 SIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWH 112 (437)
Q Consensus 33 ~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~s 112 (437)
....+..++++ +.+.++++++.|+ +++|+...-... ...... ...+........++++..|.+++|+
T Consensus 35 ~~~~~n~lavs-~~~~~l~~~~~dg-v~v~~~~~~~~~--~~~~~~---------~~~~~~~~~~~~~~~~~~v~~l~~s 101 (434)
T 2oit_A 35 PKERSSLLAVS-NKYGLVFAGGASG-LQIFPTKNLLIQ--NKPGDD---------PNKIVDKVQGLLVPMKFPIHHLALS 101 (434)
T ss_dssp CCSCCBCEEEE-TTTTEEEEEETTE-EEEEEHHHHCCC--CCTTCC---------TTCEEECCCCEEECCSSCEEEEEEC
T ss_pred CCCCccEEEEe-cCCCEEEEECCCE-EEEEEchHhhhh--cccccC---------cccccccCccccccCCCcccEEEEc
Confidence 34457788888 7888888888887 888774321100 000000 0001111112234456789999999
Q ss_pred CCCCCEEE----EEECCCcEEEEEcCCC-----CCCC---CeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCC
Q psy4571 113 LLHESLFG----SVADDQKLMIWDTRSH-----NVSK---PSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180 (437)
Q Consensus 113 p~~~~~l~----~~~~dg~v~vwd~~~~-----~~~~---~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~ 180 (437)
| ++.+|+ +|+.|+.|++||+.+. ...+ .+..+.+|...|.+++|+|++..+|++++.||+|++||++
T Consensus 102 p-dg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~ 180 (434)
T 2oit_A 102 C-DNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVT 180 (434)
T ss_dssp T-TSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEES
T ss_pred C-CCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcC
Confidence 9 577888 7888999999998743 1111 2455667999999999999854479999999999999999
Q ss_pred CCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEcc
Q psy4571 181 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNP 260 (437)
Q Consensus 181 ~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p 260 (437)
++.. .....+|...|++++|+|+|++ |++|+.||.|++||++ +......... . .....|...|.+++|++
T Consensus 181 ~~~~-~~~~~~~~~~v~~v~wspdg~~-lasgs~dg~v~iwd~~-~~~~~~~~~~----~---~~~~~~~~~v~~v~w~~ 250 (434)
T 2oit_A 181 ETVK-VCATLPSTVAVTSVCWSPKGKQ-LAVGKQNGTVVQYLPT-LQEKKVIPCP----P---FYESDHPVRVLDVLWIG 250 (434)
T ss_dssp SSEE-EEEEECGGGCEEEEEECTTSSC-EEEEETTSCEEEECTT-CCEEEEECCC----T---TCCTTSCEEEEEEEEEE
T ss_pred CCcc-eeeccCCCCceeEEEEcCCCCE-EEEEcCCCcEEEEccC-CcccccccCC----c---ccCCCCceeEEEEEEec
Confidence 8644 5556678899999999999985 8999999999999998 3221110000 0 00013445899999999
Q ss_pred CCCeEEEEEeCCCe------EEEEeCCCCC
Q psy4571 261 NEPWVICSVSEDNI------MQEYCDSTDS 284 (437)
Q Consensus 261 ~~~~~l~s~~~dg~------i~iwd~~~~~ 284 (437)
++.++++..+.||. +++|+++..+
T Consensus 251 ~~~~l~~~~~~dg~~~~~~~v~i~~l~~~~ 280 (434)
T 2oit_A 251 TYVFAIVYAAADGTLETSPDVVMALLPKKE 280 (434)
T ss_dssp TTEEEEEEEETTCCSSSCCEEEEEECCCTT
T ss_pred CceEEEEEccCCCccCCCCceEEEEeccCC
Confidence 88855555556543 8999998753
No 138
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.87 E-value=4.2e-21 Score=197.55 Aligned_cols=293 Identities=8% Similarity=-0.031 Sum_probs=195.2
Q ss_pred eEEEEeeCCCcceEEEeeccCceEeeecCCCc--------------eeEEEecCCCCeEEEecC----------ceEEEE
Q psy4571 37 FYRLCVAEPFDDAVEERVINEEYKIWKKNTPF--------------LYDLVVNNYVANISCILN----------ISILFF 92 (437)
Q Consensus 37 v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~--------------~~~~~~~~~~~~i~~~~~----------~~i~~~ 92 (437)
+.+++|+ |+++++++ +.|+++++|+..++. +....+++++..+....+ +.+.+|
T Consensus 19 ~~~~~~s-pdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~ 96 (723)
T 1xfd_A 19 DPEAKWI-SDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLS 96 (723)
T ss_dssp CCCCCBS-SSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEE
T ss_pred ccccEEc-CCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEE
Confidence 5678899 99997776 789999999965432 567788888887755432 788999
Q ss_pred Eeeecccccc------CCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCC---------------
Q psy4571 93 EIIFTQNFPF------PLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAE--------------- 151 (437)
Q Consensus 93 ~~~~~~~~~~------~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~--------------- 151 (437)
|+..++...+ ...+..++||| +++.|+.++. +.|++||+.+ .+.......+...
T Consensus 97 d~~~~~~~~l~~~~~~~~~~~~~~~SP-dG~~la~~~~-~~i~~~~~~~---g~~~~~~~~~~~~~~~~g~~~~v~~ee~ 171 (723)
T 1xfd_A 97 KIPHGDPQSLDPPEVSNAKLQYAGWGP-KGQQLIFIFE-NNIYYCAHVG---KQAIRVVSTGKEGVIYNGLSDWLYEEEI 171 (723)
T ss_dssp ESSSCCCEECCCTTCCSCCCSBCCBCS-STTCEEEEET-TEEEEESSSS---SCCEEEECCCBTTTEEEEECCHHHHHTT
T ss_pred ECCCCceEeccCCccccccccccEECC-CCCEEEEEEC-CeEEEEECCC---CceEEEecCCCCCceECcccceeEEEEe
Confidence 9876553222 22388999999 6778887775 7999999984 3444444443333
Q ss_pred ---eEEEEEeCCCCcEEEEEeCCC----------------------------------eEEEEeCCCCceeeeEeccC--
Q psy4571 152 ---VNCLSFNPYSEYILATGSADK----------------------------------TVALWDLRNLKLKLHSFESH-- 192 (437)
Q Consensus 152 ---v~~l~~~~~~~~~l~sgs~dg----------------------------------~i~lwd~~~~~~~~~~~~~h-- 192 (437)
+.+++|+|||++ |++++.|+ .|++||+.+++. ...+..+
T Consensus 172 ~~~~~~~~~SpDg~~-la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~-~~~l~~~~~ 249 (723)
T 1xfd_A 172 LKTHIAHWWSPDGTR-LAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTH-DLEMMPPDD 249 (723)
T ss_dssp SSSSEEEEECTTSSE-EEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCC-CEECCCCCC
T ss_pred ccCcceEEECCCCCE-EEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCce-eEEeeCCcc
Confidence 378999999996 77776543 799999988653 3444443
Q ss_pred ----CCceEEEEEcCCCCcEEEEEe----CCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccE----EEEEEcc
Q psy4571 193 ----KDEIFQVQWSPHNETILASSG----TDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKI----SDFSWNP 260 (437)
Q Consensus 193 ----~~~v~~v~~~p~~~~~l~sg~----~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v----~~l~~~p 260 (437)
...+..++|+|||+. +++.+ .+..|++||+.+++.... . ...+...+ ..++|+|
T Consensus 250 ~~~~~~~~~~~~~SpDg~~-l~~~~~~~~~~~~i~~~d~~~g~~~~~------------~-~~~~~~~~~~~~~~~~~sp 315 (723)
T 1xfd_A 250 PRMREYYITMVKWATSTKV-AVTWLNRAQNVSILTLCDATTGVCTKK------------H-EDESEAWLHRQNEEPVFSK 315 (723)
T ss_dssp GGGSSEEEEEEEESSSSEE-EEEEEETTSCEEEEEEEETTTCCEEEE------------E-EEECSSCCCCCCCCCEECT
T ss_pred CCCccceeEEEEEeCCCeE-EEEEEcCCCCeEEEEEEeCCCCcceEE------------E-EeccCCEEeccCCCceEcC
Confidence 567899999999984 65543 235799999987643211 1 11223333 3789999
Q ss_pred CCCeEEEE-EeCCC------eEEEEe-CCCCCC--ceeeeeeecccCCcee-eeecCCCCcccccCCC---Ccccccccc
Q psy4571 261 NEPWVICS-VSEDN------IMQEYC-DSTDSD--TKTMRLDSIRSNGGIS-STASPTASSTASESPT---PTNSVHEKN 326 (437)
Q Consensus 261 ~~~~~l~s-~~~dg------~i~iwd-~~~~~~--~~~~~~~~~~~~~~~~-~~~s~~g~~l~s~s~d---~~~~~~~~~ 326 (437)
+|+.+++. +..++ .|.+|| ..++.. ...+.. ....... ++|+|||+.|+..+.+ +.
T Consensus 316 dg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~---~~~~~~~~~~~spdg~~l~~~~~~~~~~~------- 385 (723)
T 1xfd_A 316 DGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITS---GDWDVTKILAYDEKGNKIYFLSTEDLPRR------- 385 (723)
T ss_dssp TSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCC---SSSCEEEEEEEETTTTEEEEEESSSCTTC-------
T ss_pred CCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeec---CCeEEEeeeEEcCCCCEEEEEEcCCCCcc-------
Confidence 99966654 56677 577777 344431 333321 1222333 5899999988765444 34
Q ss_pred cccccccccchhhh--hhhhhcC---CCccccccCCCCCCccccc
Q psy4571 327 YWQGLVLFDILVCE--EQRQLLG---TEEESSDRHSSDNDTEDLN 366 (437)
Q Consensus 327 ~~~~i~~wd~~~~~--~~~~~~~---h~~~~~~~~~~~~~~~~~~ 366 (437)
+++|++.... ....+.+ |...+..+.++|+|+.++.
T Consensus 386 ----~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~ 426 (723)
T 1xfd_A 386 ----RQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLL 426 (723)
T ss_dssp ----CEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEE
T ss_pred ----eEEEEEeCCCCCCcceecccccCCCCeEEEEECCCCCEEEE
Confidence 6778775432 3344543 5566777889999876553
No 139
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.86 E-value=2e-20 Score=174.16 Aligned_cols=259 Identities=10% Similarity=0.081 Sum_probs=170.1
Q ss_pred EEecCceEEEEEeee------ccccccCCCcceEEeeCCCCCEEEEEECC-CcEEEEEcCCC-CCCCCeeeeccCCCCeE
Q psy4571 82 SCILNISILFFEIIF------TQNFPFPLSRQDVAWHLLHESLFGSVADD-QKLMIWDTRSH-NVSKPSHTVDAHTAEVN 153 (437)
Q Consensus 82 ~~~~~~~i~~~~~~~------~~~~~~~~~v~~~~~sp~~~~~l~~~~~d-g~v~vwd~~~~-~~~~~~~~~~~h~~~v~ 153 (437)
+...++.|.+|++.. .........+.+++|+| ++++|++++.+ +.|.+|++... .....+..+..+. .+.
T Consensus 10 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~ 87 (343)
T 1ri6_A 10 ASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSP-DKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLT 87 (343)
T ss_dssp EEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECT-TSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCS
T ss_pred eCCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECC-CCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCc
Confidence 335688999998741 12234567899999999 57777777776 99999999721 1222334444433 788
Q ss_pred EEEEeCCCCcEEEEEeCCCeEEEEeCCCCc--eeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCC
Q psy4571 154 CLSFNPYSEYILATGSADKTVALWDLRNLK--LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQS 231 (437)
Q Consensus 154 ~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~--~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~ 231 (437)
+++|+|+++++++++..++.|.+||+..+. .....+. ....+.+++|+|+++++++++..++.|++||+.......
T Consensus 88 ~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~- 165 (343)
T 1ri6_A 88 HISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVE-GLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLV- 165 (343)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEEC-CCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEE-
T ss_pred EEEEcCCCCEEEEEecCCCeEEEEECCCCcccccccccc-CCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCcee-
Confidence 999999999744555568999999994221 2233343 335688999999998655444489999999998622111
Q ss_pred CCCCCCCCCceEE--Eec-CccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCC--CCCceeeeeeecc-----cCCcee
Q psy4571 232 TEDAEDGPPELLF--IHG-GHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDST--DSDTKTMRLDSIR-----SNGGIS 301 (437)
Q Consensus 232 ~~~~~~~~~~~~~--~~~-~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~--~~~~~~~~~~~~~-----~~~~~~ 301 (437)
.+. ... .....+.+++|+|+++++++++..++.|.+||+.. ++........... ......
T Consensus 166 ----------~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 235 (343)
T 1ri6_A 166 ----------AQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAAD 235 (343)
T ss_dssp ----------EEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEE
T ss_pred ----------eecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccc
Confidence 011 112 22347889999999996667777899999999964 3321111111111 112335
Q ss_pred eeecCCCCccc-ccCCCCcccccccccccccccccch----hhhhhhhhcCCCccccccCCCCCCccccc
Q psy4571 302 STASPTASSTA-SESPTPTNSVHEKNYWQGLVLFDIL----VCEEQRQLLGTEEESSDRHSSDNDTEDLN 366 (437)
Q Consensus 302 ~~~s~~g~~l~-s~s~d~~~~~~~~~~~~~i~~wd~~----~~~~~~~~~~h~~~~~~~~~~~~~~~~~~ 366 (437)
++|+|+|++++ ++..++. +.+||+. +.+.+..+..+.. +..+.++|+|..+..
T Consensus 236 i~~s~dg~~l~v~~~~~~~-----------i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~ 293 (343)
T 1ri6_A 236 IHITPDGRHLYACDRTASL-----------ITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGKYLIA 293 (343)
T ss_dssp EEECTTSSEEEEEETTTTE-----------EEEEEECTTSCCEEEEEEEECSSS-CCCEEECTTSSEEEE
T ss_pred eEECCCCCEEEEEecCCCE-----------EEEEEEcCCCCceEEeeeecCCCc-cceEEECCCCCEEEE
Confidence 79999998776 5556666 7888887 2334444555544 778889998875443
No 140
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.86 E-value=3.6e-21 Score=185.58 Aligned_cols=212 Identities=11% Similarity=0.110 Sum_probs=150.8
Q ss_pred CCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCC-------CCCee-----eeccCCCCeEEEEEeCCCCcEEE----E
Q psy4571 104 LSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNV-------SKPSH-----TVDAHTAEVNCLSFNPYSEYILA----T 167 (437)
Q Consensus 104 ~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~-------~~~~~-----~~~~h~~~v~~l~~~~~~~~~l~----s 167 (437)
..++.+++++ .+.++++++.+| +++|+...... ...+. ....+.+.|.+++|+|++.+ |+ +
T Consensus 37 ~~~n~lavs~-~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~-lav~~~s 113 (434)
T 2oit_A 37 ERSSLLAVSN-KYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLT-LSACMMS 113 (434)
T ss_dssp SCCBCEEEET-TTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCE-EEEEEEE
T ss_pred CCccEEEEec-CCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCE-EEEEEec
Confidence 4678999999 677888898888 88987542100 00111 11235678999999999996 66 7
Q ss_pred EeCCCeEEEEeCCCC-----c--e---eeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCC
Q psy4571 168 GSADKTVALWDLRNL-----K--L---KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAED 237 (437)
Q Consensus 168 gs~dg~i~lwd~~~~-----~--~---~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~ 237 (437)
|+.|+.|++||+++. + . ....+.+|...|.+++|+|++..+|++++.||+|++||+++..
T Consensus 114 gs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~---------- 183 (434)
T 2oit_A 114 SEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETV---------- 183 (434)
T ss_dssp TTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSE----------
T ss_pred cCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCc----------
Confidence 889999999998753 1 1 1345567999999999999854579999999999999998752
Q ss_pred CCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeec----ccCCceeeeecCCCCcccc
Q psy4571 238 GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSI----RSNGGISSTASPTASSTAS 313 (437)
Q Consensus 238 ~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~----~~~~~~~~~~s~~g~~l~s 313 (437)
.+....+|...|.+++|+|+|+ +|++|+.||.|++||++ ++....+..... +...+..+.|++++.++++
T Consensus 184 ----~~~~~~~~~~~v~~v~wspdg~-~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~ 257 (434)
T 2oit_A 184 ----KVCATLPSTVAVTSVCWSPKGK-QLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIV 257 (434)
T ss_dssp ----EEEEEECGGGCEEEEEECTTSS-CEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEE
T ss_pred ----ceeeccCCCCceeEEEEcCCCC-EEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEE
Confidence 2334567889999999999999 78899999999999998 544444433211 1125667799998888754
Q ss_pred c-CCCCcccccccccccccccccchhh
Q psy4571 314 E-SPTPTNSVHEKNYWQGLVLFDILVC 339 (437)
Q Consensus 314 ~-s~d~~~~~~~~~~~~~i~~wd~~~~ 339 (437)
. ..++.+... ..+++||+...
T Consensus 258 ~~~~dg~~~~~-----~~v~i~~l~~~ 279 (434)
T 2oit_A 258 YAAADGTLETS-----PDVVMALLPKK 279 (434)
T ss_dssp EEETTCCSSSC-----CEEEEEECCCT
T ss_pred EccCCCccCCC-----CceEEEEeccC
Confidence 3 233322111 11677887654
No 141
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.86 E-value=2.8e-19 Score=167.21 Aligned_cols=217 Identities=10% Similarity=0.056 Sum_probs=145.1
Q ss_pred CCCcceEEeeCCCCCEEEEEE-CCCcEEEEEcCCCCCCCCeeeecc---------CCCCeEEEEEeCCCCcEEEEEeCCC
Q psy4571 103 PLSRQDVAWHLLHESLFGSVA-DDQKLMIWDTRSHNVSKPSHTVDA---------HTAEVNCLSFNPYSEYILATGSADK 172 (437)
Q Consensus 103 ~~~v~~~~~sp~~~~~l~~~~-~dg~v~vwd~~~~~~~~~~~~~~~---------h~~~v~~l~~~~~~~~~l~sgs~dg 172 (437)
...+..++|+| ++++|++++ .++.|.+|++........+..+.. +...+.+++|+|+|+ ++++...++
T Consensus 85 ~~~p~~~a~sp-dg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~~~ 162 (347)
T 3hfq_A 85 GTPPAYVAVDE-ARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLGSD 162 (347)
T ss_dssp SCCCSEEEEET-TTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETTTT
T ss_pred CCCCEEEEECC-CCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeCCCC
Confidence 45778999999 567666666 789999999964322233333321 123488999999999 788888899
Q ss_pred eEEEEeCC-CCcee-eeEecc-CCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCc
Q psy4571 173 TVALWDLR-NLKLK-LHSFES-HKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGH 249 (437)
Q Consensus 173 ~i~lwd~~-~~~~~-~~~~~~-h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h 249 (437)
.|.+|++. +++.. ...+.. ....+..++|+|+|+++++++..++.|.+|++....... ..+......
T Consensus 163 ~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~----------~~~~~~~~~ 232 (347)
T 3hfq_A 163 KVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAF----------TQLGIVKTI 232 (347)
T ss_dssp EEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEE----------EEEEEEESS
T ss_pred EEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCce----------EEeeeeeec
Confidence 99999998 33321 112222 233678899999999767777788999999987521110 111112221
Q ss_pred c------ccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCC-Ccccc
Q psy4571 250 T------AKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPT-PTNSV 322 (437)
Q Consensus 250 ~------~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d-~~~~~ 322 (437)
. ..+..++|+|+|+++++++..++.|.+|++........+.....+...+..++|+|||++|++++.+ +.
T Consensus 233 ~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~--- 309 (347)
T 3hfq_A 233 PADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDN--- 309 (347)
T ss_dssp CTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTE---
T ss_pred CCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCc---
Confidence 1 4588999999999766788889999999997432222222222223446678999999988777644 55
Q ss_pred cccccccccccc--cchhhhhh
Q psy4571 323 HEKNYWQGLVLF--DILVCEEQ 342 (437)
Q Consensus 323 ~~~~~~~~i~~w--d~~~~~~~ 342 (437)
+.+| |..+|+..
T Consensus 310 --------v~v~~~d~~tg~l~ 323 (347)
T 3hfq_A 310 --------ATLYARDLTSGKLS 323 (347)
T ss_dssp --------EEEEEECTTTCCEE
T ss_pred --------EEEEEEeCCCCeEE
Confidence 6777 55566543
No 142
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.85 E-value=1.2e-19 Score=168.42 Aligned_cols=247 Identities=9% Similarity=0.020 Sum_probs=162.4
Q ss_pred EEEeeCCCcceEEEeec-cCceEeeecCCCce-eEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeCCCC
Q psy4571 39 RLCVAEPFDDAVEERVI-NEEYKIWKKNTPFL-YDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHLLHE 116 (437)
Q Consensus 39 ~~~~~~~~~~~l~tgs~-d~~v~iw~~~~~~~-~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp~~~ 116 (437)
.++|+ |+++.++.++. ++.+.+|+..++.+ ..... .......+++|+| ++
T Consensus 44 ~~~~s-~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~--------------------------~~~~~~~~~~~s~-dg 95 (331)
T 3u4y_A 44 DTAIT-SDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQ--------------------------EGQSSMADVDITP-DD 95 (331)
T ss_dssp EEEEC-SSSCEEEEEESTTCEEEEEECSSSSCEEEEEE--------------------------ECSSCCCCEEECT-TS
T ss_pred eEEEc-CCCCEEEEEeCCCCeEEEEECCCCceeEEecc--------------------------cCCCCccceEECC-CC
Confidence 66777 77764444433 66777777665543 11110 0112333499999 57
Q ss_pred CEEEEEECCC---cEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCe-EEEEeCCCCceee---eEe
Q psy4571 117 SLFGSVADDQ---KLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKT-VALWDLRNLKLKL---HSF 189 (437)
Q Consensus 117 ~~l~~~~~dg---~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~-i~lwd~~~~~~~~---~~~ 189 (437)
++++++..++ .|.+||+. ..+.+..+.. .....+++|+|+|+++++++..++. |.+|++....... ...
T Consensus 96 ~~l~~~~~~~~~~~i~v~d~~---~~~~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~ 171 (331)
T 3u4y_A 96 QFAVTVTGLNHPFNMQSYSFL---KNKFISTIPI-PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEF 171 (331)
T ss_dssp SEEEECCCSSSSCEEEEEETT---TTEEEEEEEC-CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEE
T ss_pred CEEEEecCCCCcccEEEEECC---CCCeEEEEEC-CCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCcc
Confidence 7777555553 89999998 4455555544 4457999999999986677777788 9999998644311 112
Q ss_pred ccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEE
Q psy4571 190 ESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSV 269 (437)
Q Consensus 190 ~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~ 269 (437)
.........++|+|+|+++++++..++.|++||+.+++.. ..+..+.. ...+..++|+|+|++++++.
T Consensus 172 ~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~-----------~~~~~~~~-~~~~~~~~~spdg~~l~v~~ 239 (331)
T 3u4y_A 172 ISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENI-----------TLLNAVGT-NNLPGTIVVSRDGSTVYVLT 239 (331)
T ss_dssp ECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSC-----------EEEEEEEC-SSCCCCEEECTTSSEEEEEC
T ss_pred ccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCccc-----------ceeeeccC-CCCCceEEECCCCCEEEEEE
Confidence 2344568999999999976777778999999999876431 11233333 35678899999999666676
Q ss_pred eCCCeEEEEeCCCCCC--ceeeeee----ecccCCceeeeecCCCCcccccCC-CCcccccccccccccccccchhhh
Q psy4571 270 SEDNIMQEYCDSTDSD--TKTMRLD----SIRSNGGISSTASPTASSTASESP-TPTNSVHEKNYWQGLVLFDILVCE 340 (437)
Q Consensus 270 ~~dg~i~iwd~~~~~~--~~~~~~~----~~~~~~~~~~~~s~~g~~l~s~s~-d~~~~~~~~~~~~~i~~wd~~~~~ 340 (437)
..++.|.+||+.+++. +..+... .........++|+|+|++++.++. ++. +.+||+....
T Consensus 240 ~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~-----------v~v~d~~~~~ 306 (331)
T 3u4y_A 240 ESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRE-----------LKVFTISGKV 306 (331)
T ss_dssp SSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTE-----------EEEEETTSCE
T ss_pred cCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCc-----------EEEEEecCCc
Confidence 7788999999998865 2222211 111111233599999998765544 445 8899987644
No 143
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.85 E-value=8.3e-20 Score=169.53 Aligned_cols=260 Identities=10% Similarity=0.029 Sum_probs=181.9
Q ss_pred ceEEEeeccCceEeeecCCCc-------------eeEEEecCCCCeE--EEecCceEEEEEeeeccc---cccCC-----
Q psy4571 48 DAVEERVINEEYKIWKKNTPF-------------LYDLVVNNYVANI--SCILNISILFFEIIFTQN---FPFPL----- 104 (437)
Q Consensus 48 ~~l~tgs~d~~v~iw~~~~~~-------------~~~~~~~~~~~~i--~~~~~~~i~~~~~~~~~~---~~~~~----- 104 (437)
+++++++.++.|++|+..++. +..+.+++.+..+ +...++.|.+||....+. +....
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~ 81 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV 81 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccc
Confidence 467888889999999855432 4455566666544 333467899998654332 22322
Q ss_pred -CcceEEeeCCCCCEEEEEE------------CCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCC
Q psy4571 105 -SRQDVAWHLLHESLFGSVA------------DDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSAD 171 (437)
Q Consensus 105 -~v~~~~~sp~~~~~l~~~~------------~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~d 171 (437)
.+.+++|+| +++.++++. .++.|.+||+. ..+.+..+.. ...+.+++|+|++++ |+++ +
T Consensus 82 ~~~~~~~~s~-dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~---~~~~~~~~~~-~~~~~~~~~s~dg~~-l~~~--~ 153 (337)
T 1pby_B 82 KSLFGAALSP-DGKTLAIYESPVRLELTHFEVQPTRVALYDAE---TLSRRKAFEA-PRQITMLAWARDGSK-LYGL--G 153 (337)
T ss_dssp ECTTCEEECT-TSSEEEEEEEEEEECSSCEEECCCEEEEEETT---TTEEEEEEEC-CSSCCCEEECTTSSC-EEEE--S
T ss_pred ccccceEECC-CCCEEEEEecccccccccccccCceEEEEECC---CCcEEEEEeC-CCCcceeEECCCCCE-EEEe--C
Confidence 688999999 566777775 57999999998 3444445443 446788999999997 6666 6
Q ss_pred CeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCC-----------------------eEEEEEcCCCCC
Q psy4571 172 KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDR-----------------------RLHVWDLSKIGE 228 (437)
Q Consensus 172 g~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg-----------------------~i~vwd~~~~~~ 228 (437)
+.|.+||+.+++. ...+..+.. ...+.|+|++..+++++..++ .|.+||+.+++.
T Consensus 154 ~~i~~~d~~~~~~-~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~ 231 (337)
T 1pby_B 154 RDLHVMDPEAGTL-VEDKPIQSW-EAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEM 231 (337)
T ss_dssp SSEEEEETTTTEE-EEEECSTTT-TTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCE
T ss_pred CeEEEEECCCCcE-eeeeecccc-CCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCc
Confidence 8999999998664 444443331 112378999986554444444 468999987643
Q ss_pred CCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCC
Q psy4571 229 EQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTA 308 (437)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g 308 (437)
. ......+...+.+++|+|+++ .++++ ++.|++||+.+++....+.. ...+..++|+|+|
T Consensus 232 ~-------------~~~~~~~~~~~~~~~~s~dg~-~l~~~--~~~v~~~d~~~~~~~~~~~~----~~~~~~~~~s~dg 291 (337)
T 1pby_B 232 A-------------MREVRIMDVFYFSTAVNPAKT-RAFGA--YNVLESFDLEKNASIKRVPL----PHSYYSVNVSTDG 291 (337)
T ss_dssp E-------------EEEEEECSSCEEEEEECTTSS-EEEEE--ESEEEEEETTTTEEEEEEEC----SSCCCEEEECTTS
T ss_pred e-------------EeecCCCCCceeeEEECCCCC-EEEEe--CCeEEEEECCCCcCcceecC----CCceeeEEECCCC
Confidence 2 122445566788999999999 45555 79999999998876665543 2456678999999
Q ss_pred CcccccCCCCcccccccccccccccccchhhhhhhhhcCC
Q psy4571 309 SSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGT 348 (437)
Q Consensus 309 ~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h 348 (437)
+++++++.++. +++||+.+++.+..+..+
T Consensus 292 ~~l~~~~~~~~-----------i~v~d~~~~~~~~~~~~~ 320 (337)
T 1pby_B 292 STVWLGGALGD-----------LAAYDAETLEKKGQVDLP 320 (337)
T ss_dssp CEEEEESBSSE-----------EEEEETTTCCEEEEEECG
T ss_pred CEEEEEcCCCc-----------EEEEECcCCcEEEEEEcC
Confidence 98888877776 899999999887777554
No 144
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.84 E-value=2.4e-19 Score=184.01 Aligned_cols=272 Identities=13% Similarity=0.112 Sum_probs=187.9
Q ss_pred ceeEEEEeeCCCcceEEEeeccCceEeeecCCCce----------eEEEecCCCCeEEEecCceEEEEEeee-----ccc
Q psy4571 35 YRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFL----------YDLVVNNYVANISCILNISILFFEIIF-----TQN 99 (437)
Q Consensus 35 ~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~----------~~~~~~~~~~~i~~~~~~~i~~~~~~~-----~~~ 99 (437)
..|.+++|+ |+ ..++.+ .|+.+++|+..++.+ ....|++++..+....++.|.+|++.. ++.
T Consensus 82 ~~v~~~~~s-pd-~~~~~~-~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG~~la~~~~~~i~v~~~~~~~~~~g~~ 158 (706)
T 2z3z_A 82 FPSFRTLDA-GR-GLVVLF-TQGGLVGFDMLARKVTYLFDTNEETASLDFSPVGDRVAYVRNHNLYIARGGKLGEGMSRA 158 (706)
T ss_dssp CCCEEEEET-TT-TEEEEE-ETTEEEEEETTTTEEEEEECCTTCCTTCEECTTSSEEEEEETTEEEEEECBCTTSCCCCC
T ss_pred cCceeEEEC-CC-CeEEEE-ECCEEEEEECCCCceEEccCCcccccCCcCCCCCCEEEEEECCeEEEEecCcccccCCCc
Confidence 568899999 88 555544 469999999765443 345678888888888899999999876 543
Q ss_pred ccc---CCC---------------cceEEeeCCCCCEEEEEE---------------------------------CCCcE
Q psy4571 100 FPF---PLS---------------RQDVAWHLLHESLFGSVA---------------------------------DDQKL 128 (437)
Q Consensus 100 ~~~---~~~---------------v~~~~~sp~~~~~l~~~~---------------------------------~dg~v 128 (437)
... ... +.+++|+| +++.|++++ .+..|
T Consensus 159 ~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~Sp-Dg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l 237 (706)
T 2z3z_A 159 IAVTIDGTETLVYGQAVHQREFGIEKGTFWSP-KGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTV 237 (706)
T ss_dssp EESCSCCBTTEEESSCCGGGCTTCCCSEEECT-TSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEE
T ss_pred EEeccCCCCCeEcccchhhhhcCCCceEEECC-CCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEE
Confidence 321 112 58999999 678888877 44679
Q ss_pred EEEEcCCCCCCCCeeee--ccCCCCeEEEEEeCCCCcEEEEEeCCC-----eEEEEeCCCCceeeeEec-cCCC---ceE
Q psy4571 129 MIWDTRSHNVSKPSHTV--DAHTAEVNCLSFNPYSEYILATGSADK-----TVALWDLRNLKLKLHSFE-SHKD---EIF 197 (437)
Q Consensus 129 ~vwd~~~~~~~~~~~~~--~~h~~~v~~l~~~~~~~~~l~sgs~dg-----~i~lwd~~~~~~~~~~~~-~h~~---~v~ 197 (437)
++||+.++ +..... ..|...+.+++|+|+|+. |++++.++ .|.+||+.+++....... .+.. .+.
T Consensus 238 ~~~d~~~~---~~~~~~~~~~~~~~~~~~~~spdg~~-l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~ 313 (706)
T 2z3z_A 238 GIYHLATG---KTVYLQTGEPKEKFLTNLSWSPDENI-LYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLH 313 (706)
T ss_dssp EEEETTTT---EEEECCCCSCTTCEEEEEEECTTSSE-EEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCS
T ss_pred EEEECCCC---ceEeeccCCCCceeEeeEEEECCCCE-EEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccC
Confidence 99999843 222222 256678999999999996 77777665 899999998633222221 2222 246
Q ss_pred EEEEcC--CCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEE-EEEccCCCeEEEEEeCCC-
Q psy4571 198 QVQWSP--HNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISD-FSWNPNEPWVICSVSEDN- 273 (437)
Q Consensus 198 ~v~~~p--~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~-l~~~p~~~~~l~s~~~dg- 273 (437)
.++|+| +|+ ++++++.|+.+++|++.... ..+..+..|...+.. ++|+|+++.++++++.++
T Consensus 314 ~~~~sp~~dg~-~l~~~~~~g~~~l~~~~~~~-------------~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~ 379 (706)
T 2z3z_A 314 PLTFLPGSNNQ-FIWQSRRDGWNHLYLYDTTG-------------RLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASP 379 (706)
T ss_dssp CCEECTTCSSE-EEEEECTTSSCEEEEEETTS-------------CEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCT
T ss_pred CceeecCCCCE-EEEEEccCCccEEEEEECCC-------------CEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCC
Confidence 789999 998 68889999999999876211 223445567777876 899999996666776665
Q ss_pred ---eEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhh
Q psy4571 274 ---IMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCE 340 (437)
Q Consensus 274 ---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~ 340 (437)
.|..||+.+++ ...+. +..+...++|||||++++....+.. .-..+++||..+++
T Consensus 380 ~~~~l~~~d~~~~~-~~~l~----~~~~~~~~~~spdg~~l~~~~~~~~-------~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 380 LERHFYCIDIKGGK-TKDLT----PESGMHRTQLSPDGSAIIDIFQSPT-------VPRKVTVTNIGKGS 437 (706)
T ss_dssp TCBEEEEEETTCCC-CEESC----CSSSEEEEEECTTSSEEEEEEECSS-------CSCEEEEEESSSCE
T ss_pred ceEEEEEEEcCCCC-ceecc----CCCceEEEEECCCCCEEEEEecCCC-------CCcEEEEEECCCCe
Confidence 77788887765 33332 3345667899999998876643321 00115667766554
No 145
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.84 E-value=3.9e-20 Score=189.88 Aligned_cols=295 Identities=13% Similarity=0.111 Sum_probs=193.6
Q ss_pred eeEEEEeeCCCcceEEEeeccCceEeeecCCCc-----------------------------eeEEEecCCCCeEEEecC
Q psy4571 36 RFYRLCVAEPFDDAVEERVINEEYKIWKKNTPF-----------------------------LYDLVVNNYVANISCILN 86 (437)
Q Consensus 36 ~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~-----------------------------~~~~~~~~~~~~i~~~~~ 86 (437)
.+..+.|. ++.+++++.|+ | +||..++. +..+.++++ ..+.+..+
T Consensus 27 ~~~~~~w~---g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~~~ 100 (706)
T 2z3z_A 27 YVVGLQWM---GDNYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLFTQ 100 (706)
T ss_dssp -CTTCEEE---TTEEEEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEEET
T ss_pred cCCCCcCc---CCeEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEEEC
Confidence 34445565 56777777777 7 99965543 455677888 77777788
Q ss_pred ceEEEEEeeecccc---ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCC--CCCCCeeeeccCCCC----------
Q psy4571 87 ISILFFEIIFTQNF---PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSH--NVSKPSHTVDAHTAE---------- 151 (437)
Q Consensus 87 ~~i~~~~~~~~~~~---~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~--~~~~~~~~~~~h~~~---------- 151 (437)
+.+.+||+..++.. .....+.+++|+| +++.|+.+ .++.|++||+.+. ...+.......+...
T Consensus 101 ~~i~~~d~~~~~~~~l~~~~~~~~~~~~Sp-dG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~e 178 (706)
T 2z3z_A 101 GGLVGFDMLARKVTYLFDTNEETASLDFSP-VGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQR 178 (706)
T ss_dssp TEEEEEETTTTEEEEEECCTTCCTTCEECT-TSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGG
T ss_pred CEEEEEECCCCceEEccCCcccccCCcCCC-CCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhh
Confidence 99999997655432 2356789999999 67778775 5899999999840 002333333333332
Q ss_pred ----eEEEEEeCCCCcEEEEEe---------------------------------CCCeEEEEeCCCCceeeeEe--ccC
Q psy4571 152 ----VNCLSFNPYSEYILATGS---------------------------------ADKTVALWDLRNLKLKLHSF--ESH 192 (437)
Q Consensus 152 ----v~~l~~~~~~~~~l~sgs---------------------------------~dg~i~lwd~~~~~~~~~~~--~~h 192 (437)
+.+++|+|||++ |++++ .+..|.+||+.+++. .... ..|
T Consensus 179 e~~~~~~~~~SpDg~~-la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~-~~~~~~~~~ 256 (706)
T 2z3z_A 179 EFGIEKGTFWSPKGSC-LAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKT-VYLQTGEPK 256 (706)
T ss_dssp CTTCCCSEEECTTSSE-EEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEE-EECCCCSCT
T ss_pred hcCCCceEEECCCCCE-EEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCce-EeeccCCCC
Confidence 488999999996 77776 457899999998653 2222 246
Q ss_pred CCceEEEEEcCCCCcEEEEEeCCC-----eEEEEEcCCCCCCCCCCCCCCCCCceEEEecCcc---ccEEEEEEcc--CC
Q psy4571 193 KDEIFQVQWSPHNETILASSGTDR-----RLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHT---AKISDFSWNP--NE 262 (437)
Q Consensus 193 ~~~v~~v~~~p~~~~~l~sg~~dg-----~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~---~~v~~l~~~p--~~ 262 (437)
...+.+++|+|+|+. |++++.|+ .|++||+.++..... +.. ..+. ..+.+++|+| +|
T Consensus 257 ~~~~~~~~~spdg~~-l~~~~~~~~~~~~~v~~~d~~~g~~~~~-----------~~~-~~~~~~~~~~~~~~~sp~~dg 323 (706)
T 2z3z_A 257 EKFLTNLSWSPDENI-LYVAEVNRAQNECKVNAYDAETGRFVRT-----------LFV-ETDKHYVEPLHPLTFLPGSNN 323 (706)
T ss_dssp TCEEEEEEECTTSSE-EEEEEECTTSCEEEEEEEETTTCCEEEE-----------EEE-EECSSCCCCCSCCEECTTCSS
T ss_pred ceeEeeEEEECCCCE-EEEEEeCCCCCeeEEEEEECCCCceeeE-----------EEE-ccCCCeECccCCceeecCCCC
Confidence 678999999999995 66666565 899999987632111 111 1122 1246789999 99
Q ss_pred CeEEEEEeCCCeEEEEeCC-CCCCceeeeeeecccCCcee-eeecCCCCcccccCCCCcccccccccccccccccchhhh
Q psy4571 263 PWVICSVSEDNIMQEYCDS-TDSDTKTMRLDSIRSNGGIS-STASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCE 340 (437)
Q Consensus 263 ~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~~-~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~ 340 (437)
+ ++++++.|+.+++|++. +++....+.. +...... ++|+|+|+.++.++.+..- ....+..||..+++
T Consensus 324 ~-~l~~~~~~g~~~l~~~~~~~~~~~~l~~---~~~~v~~~~~~spdg~~l~~~~~~~~~------~~~~l~~~d~~~~~ 393 (706)
T 2z3z_A 324 Q-FIWQSRRDGWNHLYLYDTTGRLIRQVTK---GEWEVTNFAGFDPKGTRLYFESTEASP------LERHFYCIDIKGGK 393 (706)
T ss_dssp E-EEEEECTTSSCEEEEEETTSCEEEECCC---SSSCEEEEEEECTTSSEEEEEESSSCT------TCBEEEEEETTCCC
T ss_pred E-EEEEEccCCccEEEEEECCCCEEEecCC---CCeEEEeeeEEcCCCCEEEEEecCCCC------ceEEEEEEEcCCCC
Confidence 8 78888999999999886 4444444432 2223333 6899999877655433210 00116667777665
Q ss_pred hhhhhcCCCccccccCCCCCCcccc
Q psy4571 341 EQRQLLGTEEESSDRHSSDNDTEDL 365 (437)
Q Consensus 341 ~~~~~~~h~~~~~~~~~~~~~~~~~ 365 (437)
...+. |...+..+.++|+|..++
T Consensus 394 -~~~l~-~~~~~~~~~~spdg~~l~ 416 (706)
T 2z3z_A 394 -TKDLT-PESGMHRTQLSPDGSAII 416 (706)
T ss_dssp -CEESC-CSSSEEEEEECTTSSEEE
T ss_pred -ceecc-CCCceEEEEECCCCCEEE
Confidence 33343 555677889999998654
No 146
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.84 E-value=2.4e-19 Score=191.73 Aligned_cols=250 Identities=7% Similarity=-0.046 Sum_probs=179.6
Q ss_pred ecCceEEEEEeeec----cccccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeecc-----------C
Q psy4571 84 ILNISILFFEIIFT----QNFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDA-----------H 148 (437)
Q Consensus 84 ~~~~~i~~~~~~~~----~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~-----------h 148 (437)
..++.+.+|.+... ..+.....+...+|+| ++..++.+ .++.|.+||+. . ..+..+.. |
T Consensus 221 ~~dg~~~l~~~~~~g~~~~~l~~~~~~~~~~~Sp-DG~~la~~-~~~~i~~~d~~---~-~~l~~l~~~~~~~~~~~~~~ 294 (1045)
T 1k32_A 221 DIDGFGQIYSTDLDGKDLRKHTSFTDYYPRHLNT-DGRRILFS-KGGSIYIFNPD---T-EKIEKIEIGDLESPEDRIIS 294 (1045)
T ss_dssp CTTSSCEEEEEETTSCSCEECCCCCSSCEEEEEE-SSSCEEEE-ETTEEEEECTT---T-CCEEECCCCCCCBCCSEEEE
T ss_pred eccCceEEEEEeCCCCcceEecCCCCcceeeEcC-CCCEEEEE-eCCEEEEecCC---c-eEeeeeccCccccccccccc
Confidence 34567788875431 1222233567889999 56667666 48999999984 2 23334433 3
Q ss_pred CCCeEEEEEe-CCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCC-ceEEEEEcCCCCcEEEEEeCCCeEE-EEEcCC
Q psy4571 149 TAEVNCLSFN-PYSEYILATGSADKTVALWDLRNLKLKLHSFESHKD-EIFQVQWSPHNETILASSGTDRRLH-VWDLSK 225 (437)
Q Consensus 149 ~~~v~~l~~~-~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~-~v~~v~~~p~~~~~l~sg~~dg~i~-vwd~~~ 225 (437)
...+.+++|+ |+|+. |++++ ++.|.+|++..+. ...+..|.. .+..++|+ +|+. ++.++.++.+. +||+..
T Consensus 295 ~~~v~~~~~S~pdG~~-la~~~-~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~s-dg~~-l~~~s~~~~l~~~~d~~~ 368 (1045)
T 1k32_A 295 IPSKFAEDFSPLDGDL-IAFVS-RGQAFIQDVSGTY--VLKVPEPLRIRYVRRGGD-TKVA-FIHGTREGDFLGIYDYRT 368 (1045)
T ss_dssp CGGGGEEEEEECGGGC-EEEEE-TTEEEEECTTSSB--EEECSCCSCEEEEEECSS-SEEE-EEEEETTEEEEEEEETTT
T ss_pred ccccceeeecCCCCCE-EEEEE-cCEEEEEcCCCCc--eEEccCCCcceEEeeeEc-CCCe-EEEEECCCceEEEEECCC
Confidence 3468999999 99996 77776 8899999998754 344666777 89999999 9885 77777788888 899876
Q ss_pred CCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeec
Q psy4571 226 IGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTAS 305 (437)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s 305 (437)
+.. ..+.+|...+..++|+|+|+ .+++++.++.|++||+.+++....... +...+..++||
T Consensus 369 ~~~---------------~~l~~~~~~~~~~~~SpDG~-~la~~~~~~~v~~~d~~tg~~~~~~~~---~~~~v~~~~~S 429 (1045)
T 1k32_A 369 GKA---------------EKFEENLGNVFAMGVDRNGK-FAVVANDRFEIMTVDLETGKPTVIERS---REAMITDFTIS 429 (1045)
T ss_dssp CCE---------------EECCCCCCSEEEEEECTTSS-EEEEEETTSEEEEEETTTCCEEEEEEC---SSSCCCCEEEC
T ss_pred CCc---------------eEecCCccceeeeEECCCCC-EEEEECCCCeEEEEECCCCceEEeccC---CCCCccceEEC
Confidence 432 22337778899999999999 788899999999999998876544432 34455678999
Q ss_pred CCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCCccccccCCCCCCccccc
Q psy4571 306 PTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHSSDNDTEDLN 366 (437)
Q Consensus 306 ~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~ 366 (437)
|||+++++++.++... ........+++||+.+++ ...+.+|...+..+.|+|+|..++.
T Consensus 430 pDG~~la~~~~~~~~~-~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~~l~~ 488 (1045)
T 1k32_A 430 DNSRFIAYGFPLKHGE-TDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDADSKNLYY 488 (1045)
T ss_dssp TTSCEEEEEEEECSST-TCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEEECTTSCEEEE
T ss_pred CCCCeEEEEecCcccc-ccCCCCCeEEEEECCCCc-EEEeeCCCcccCCceEcCCCCEEEE
Confidence 9999998876543000 000111238999999887 6778888888888899999986543
No 147
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.83 E-value=4.4e-19 Score=189.69 Aligned_cols=258 Identities=13% Similarity=0.038 Sum_probs=190.9
Q ss_pred cceeEEEEeeCCCcceEEEeeccCceEeeecC--CC---------ceeEEEecCCCCeEEEecCceEEEEEeeecccccc
Q psy4571 34 IYRFYRLCVAEPFDDAVEERVINEEYKIWKKN--TP---------FLYDLVVNNYVANISCILNISILFFEIIFTQNFPF 102 (437)
Q Consensus 34 ~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~--~~---------~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~ 102 (437)
...+.++.|+ ++ .++++++.|+.+++|... ++ ......+++++..+....++.|.+|+........+
T Consensus 203 ~~~v~~~~~s-~d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~~~~~SpDG~~la~~~~~~i~~~d~~~~~l~~l 280 (1045)
T 1k32_A 203 STHVSSPVIV-GH-RIYFITDIDGFGQIYSTDLDGKDLRKHTSFTDYYPRHLNTDGRRILFSKGGSIYIFNPDTEKIEKI 280 (1045)
T ss_dssp SSCCEEEEEE-TT-EEEEEECTTSSCEEEEEETTSCSCEECCCCCSSCEEEEEESSSCEEEEETTEEEEECTTTCCEEEC
T ss_pred CCcccceEEe-CC-EEEEEEeccCceEEEEEeCCCCcceEecCCCCcceeeEcCCCCEEEEEeCCEEEEecCCceEeeee
Confidence 4457778888 66 677788889999999843 21 13345677888888777899999998632211111
Q ss_pred --------------CCCcceEEee-CCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCC-CeEEEEEeCCCCcEEE
Q psy4571 103 --------------PLSRQDVAWH-LLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTA-EVNCLSFNPYSEYILA 166 (437)
Q Consensus 103 --------------~~~v~~~~~s-p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~-~v~~l~~~~~~~~~l~ 166 (437)
...+.+++|+ | ++..+++++ ++.|.+|++..+ ....+..|.. .+..++|+ +|+. |+
T Consensus 281 ~~~~~~~~~~~~~~~~~v~~~~~S~p-dG~~la~~~-~~~i~~~~~~~~----~~~~~~~~~~~~~~~~~~s-dg~~-l~ 352 (1045)
T 1k32_A 281 EIGDLESPEDRIISIPSKFAEDFSPL-DGDLIAFVS-RGQAFIQDVSGT----YVLKVPEPLRIRYVRRGGD-TKVA-FI 352 (1045)
T ss_dssp CCCCCCBCCSEEEECGGGGEEEEEEC-GGGCEEEEE-TTEEEEECTTSS----BEEECSCCSCEEEEEECSS-SEEE-EE
T ss_pred ccCcccccccccccccccceeeecCC-CCCEEEEEE-cCEEEEEcCCCC----ceEEccCCCcceEEeeeEc-CCCe-EE
Confidence 2258999999 9 577777776 889999998732 2344567777 89999999 9986 88
Q ss_pred EEeCCCeEE-EEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEE
Q psy4571 167 TGSADKTVA-LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFI 245 (437)
Q Consensus 167 sgs~dg~i~-lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~ 245 (437)
.++.++.+. +||+.++. ...+..|...+..++|+|+|+. |++++.++.|++||+.+++. ...
T Consensus 353 ~~s~~~~l~~~~d~~~~~--~~~l~~~~~~~~~~~~SpDG~~-la~~~~~~~v~~~d~~tg~~--------------~~~ 415 (1045)
T 1k32_A 353 HGTREGDFLGIYDYRTGK--AEKFEENLGNVFAMGVDRNGKF-AVVANDRFEIMTVDLETGKP--------------TVI 415 (1045)
T ss_dssp EEETTEEEEEEEETTTCC--EEECCCCCCSEEEEEECTTSSE-EEEEETTSEEEEEETTTCCE--------------EEE
T ss_pred EEECCCceEEEEECCCCC--ceEecCCccceeeeEECCCCCE-EEEECCCCeEEEEECCCCce--------------EEe
Confidence 888888898 99998754 3344478889999999999985 88999999999999987642 233
Q ss_pred ecCccccEEEEEEccCCCeEEEEEeCC----------CeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccC
Q psy4571 246 HGGHTAKISDFSWNPNEPWVICSVSED----------NIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASES 315 (437)
Q Consensus 246 ~~~h~~~v~~l~~~p~~~~~l~s~~~d----------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s 315 (437)
..+|...+.+++|+|||++ +++++.+ +.|++||+.+++ ...+.. +......++|+|||+.++.++
T Consensus 416 ~~~~~~~v~~~~~SpDG~~-la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~---~~~~~~~~~~spdG~~l~~~s 490 (1045)
T 1k32_A 416 ERSREAMITDFTISDNSRF-IAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATT---ENSHDYAPAFDADSKNLYYLS 490 (1045)
T ss_dssp EECSSSCCCCEEECTTSCE-EEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSC---SSSBEEEEEECTTSCEEEEEE
T ss_pred ccCCCCCccceEECCCCCe-EEEEecCccccccCCCCCeEEEEECCCCc-EEEeeC---CCcccCCceEcCCCCEEEEEe
Confidence 4578888999999999994 5555543 499999999875 222221 334456678999999999888
Q ss_pred CCCccccc
Q psy4571 316 PTPTNSVH 323 (437)
Q Consensus 316 ~d~~~~~~ 323 (437)
.++....|
T Consensus 491 ~~~~~~~~ 498 (1045)
T 1k32_A 491 YRSLDPSP 498 (1045)
T ss_dssp SCCCCCEE
T ss_pred cccCCcCc
Confidence 76654444
No 148
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.83 E-value=3e-19 Score=184.26 Aligned_cols=267 Identities=10% Similarity=0.033 Sum_probs=184.0
Q ss_pred CCceeEEEecCCCCeEEE-ec-Cc-----eEEEEEeeeccccc---c---C----------------------CCcceEE
Q psy4571 66 TPFLYDLVVNNYVANISC-IL-NI-----SILFFEIIFTQNFP---F---P----------------------LSRQDVA 110 (437)
Q Consensus 66 ~~~~~~~~~~~~~~~i~~-~~-~~-----~i~~~~~~~~~~~~---~---~----------------------~~v~~~~ 110 (437)
...+....|++++..+.. .. ++ .|.+||+..++... . . ..+.+++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 355788899999987754 44 66 89999976543221 1 1 2378999
Q ss_pred eeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEec
Q psy4571 111 WHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFE 190 (437)
Q Consensus 111 ~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~ 190 (437)
||| +++.|++++. +.|++||+.++.. .....+..|...+.+++|+|||++ |+.++ ++.|.+||+.+++. .....
T Consensus 116 ~Sp-Dg~~l~~~~~-~~i~~~d~~~~~~-~~~~~l~~~~~~~~~~~~SPDG~~-la~~~-~~~i~~~d~~~g~~-~~~~~ 189 (741)
T 2ecf_A 116 WSP-DAQRLLFPLG-GELYLYDLKQEGK-AAVRQLTHGEGFATDAKLSPKGGF-VSFIR-GRNLWVIDLASGRQ-MQLTA 189 (741)
T ss_dssp ECT-TSSEEEEEET-TEEEEEESSSCST-TSCCBCCCSSSCEEEEEECTTSSE-EEEEE-TTEEEEEETTTTEE-EECCC
T ss_pred ECC-CCCEEEEEeC-CcEEEEECCCCCc-ceEEEcccCCcccccccCCCCCCE-EEEEe-CCcEEEEecCCCCE-EEecc
Confidence 999 6788888876 9999999984310 034456677888999999999996 77776 56999999998553 33333
Q ss_pred cCCCc----------------eEEEEEcCCCCcEEEEEeCCC---------------------------------eEEEE
Q psy4571 191 SHKDE----------------IFQVQWSPHNETILASSGTDR---------------------------------RLHVW 221 (437)
Q Consensus 191 ~h~~~----------------v~~v~~~p~~~~~l~sg~~dg---------------------------------~i~vw 221 (437)
.+... +..++|+|||++ |++++.|+ .|++|
T Consensus 190 ~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~-l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~ 268 (741)
T 2ecf_A 190 DGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSA-IAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVI 268 (741)
T ss_dssp CCCSSEEESCCCHHHHHHSCCCCSEEECTTSSC-EEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEE
T ss_pred CCccceeccccceeeeeccccccceEECCCCCE-EEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEE
Confidence 33322 478999999996 66666554 78888
Q ss_pred EcCC-CCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEe----CCCeEEEEeCCCCCCceeeeeeeccc
Q psy4571 222 DLSK-IGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVS----EDNIMQEYCDSTDSDTKTMRLDSIRS 296 (437)
Q Consensus 222 d~~~-~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~----~dg~i~iwd~~~~~~~~~~~~~~~~~ 296 (437)
|+.+ +..... .....|...+..++| |||+.+++++. .+..|++||+.+++....+.......
T Consensus 269 d~~~~~~~~~~------------~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~ 335 (741)
T 2ecf_A 269 SPAEQAQTQWI------------DLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTW 335 (741)
T ss_dssp CSSTTCCCEEE------------CCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSC
T ss_pred ECCCCCceEEe------------cCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCc
Confidence 8876 542111 111257788999999 99995544433 36789999999987665544321000
Q ss_pred -CCceeeeecCCCCcccccCCCCcccccccccccccccccch-hhhhhhhhcCCCcccccc-CCCCCCccc
Q psy4571 297 -NGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDIL-VCEEQRQLLGTEEESSDR-HSSDNDTED 364 (437)
Q Consensus 297 -~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~-~~~~~~~~~~h~~~~~~~-~~~~~~~~~ 364 (437)
.....++|+|||+++++++.++. .++|.+. .++ ...+.+|...+..+ .++|+|..+
T Consensus 336 ~~~~~~~~~spdg~~~~~~~~~g~-----------~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l 394 (741)
T 2ecf_A 336 VPLHNSLRFLDDGSILWSSERTGF-----------QHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLA 394 (741)
T ss_dssp CCCCSCCEECTTSCEEEEECTTSS-----------CEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEE
T ss_pred CCcCCceEECCCCeEEEEecCCCc-----------cEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEE
Confidence 02346799999998888888876 4555443 344 67777777667666 589998754
No 149
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.83 E-value=6.8e-20 Score=188.55 Aligned_cols=276 Identities=9% Similarity=-0.027 Sum_probs=178.2
Q ss_pred ceeEEEecCCCCeEEEecCceEEEEEeeeccccc---cCC----CcceEEeeCCCCCEEEEEECC---------CcEEEE
Q psy4571 68 FLYDLVVNNYVANISCILNISILFFEIIFTQNFP---FPL----SRQDVAWHLLHESLFGSVADD---------QKLMIW 131 (437)
Q Consensus 68 ~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~---~~~----~v~~~~~sp~~~~~l~~~~~d---------g~v~vw 131 (437)
....+.|++++..+....++.|++||...++... ... .+.+++||| ++++|++++.+ +.+.+|
T Consensus 18 ~~~~~~~spdg~~~~~~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~Sp-Dg~~l~~~~~~~~~~~~~~~~~i~~~ 96 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYREQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISP-DREYALFSYNVEPIYQHSYTGYYVLS 96 (723)
T ss_dssp CCCCCCBSSSSCBCCCCSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECT-TSSEEEEEESCCCCSSSCCCSEEEEE
T ss_pred cccccEEcCCCcEEEEeCCCCEEEEECCCCcEEEEeccccccccccceEEECC-CCCEEEEEecCccceeecceeeEEEE
Confidence 3566678888877766788999999987654322 111 489999999 68888888764 788899
Q ss_pred EcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCce---------------
Q psy4571 132 DTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEI--------------- 196 (437)
Q Consensus 132 d~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v--------------- 196 (437)
|+.++.. ..+....+|...+..++|+|||+. |+.++. +.|++||+.+++. ......+...+
T Consensus 97 d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~-la~~~~-~~i~~~~~~~g~~-~~~~~~~~~~~~~~g~~~~v~~ee~~ 172 (723)
T 1xfd_A 97 KIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQ-LIFIFE-NNIYYCAHVGKQA-IRVVSTGKEGVIYNGLSDWLYEEEIL 172 (723)
T ss_dssp ESSSCCC-EECCCTTCCSCCCSBCCBCSSTTC-EEEEET-TEEEEESSSSSCC-EEEECCCBTTTEEEEECCHHHHHTTS
T ss_pred ECCCCce-EeccCCccccccccccEECCCCCE-EEEEEC-CeEEEEECCCCce-EEEecCCCCCceECcccceeEEEEec
Confidence 9985432 223333345556889999999996 787775 7999999998654 43333333333
Q ss_pred ---EEEEEcCCCCcEEEEEeCCC----------------------------------eEEEEEcCCCCCCCCCCCCCCCC
Q psy4571 197 ---FQVQWSPHNETILASSGTDR----------------------------------RLHVWDLSKIGEEQSTEDAEDGP 239 (437)
Q Consensus 197 ---~~v~~~p~~~~~l~sg~~dg----------------------------------~i~vwd~~~~~~~~~~~~~~~~~ 239 (437)
.+++|+|||+. |++++.|+ .|++||+.++.....+...
T Consensus 173 ~~~~~~~~SpDg~~-la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~---- 247 (723)
T 1xfd_A 173 KTHIAHWWSPDGTR-LAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPP---- 247 (723)
T ss_dssp SSSEEEEECTTSSE-EEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCC----
T ss_pred cCcceEEECCCCCE-EEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCC----
Confidence 78999999996 66665442 7888888776532211000
Q ss_pred CceEEEecCccccEEEEEEccCCCeEEEEEe----CCCeEEEEeCCCCCCceeeeeeecccCCc----eeeeecCCCCcc
Q psy4571 240 PELLFIHGGHTAKISDFSWNPNEPWVICSVS----EDNIMQEYCDSTDSDTKTMRLDSIRSNGG----ISSTASPTASST 311 (437)
Q Consensus 240 ~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~----~dg~i~iwd~~~~~~~~~~~~~~~~~~~~----~~~~~s~~g~~l 311 (437)
.....+...+..++|+|||+ ++++.+ .+..|++||+.+++....+.... .... ...+|+|||+.+
T Consensus 248 ----~~~~~~~~~~~~~~~SpDg~-~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~--~~~~~~~~~~~~~spdg~~l 320 (723)
T 1xfd_A 248 ----DDPRMREYYITMVKWATSTK-VAVTWLNRAQNVSILTLCDATTGVCTKKHEDES--EAWLHRQNEEPVFSKDGRKF 320 (723)
T ss_dssp ----CCGGGSSEEEEEEEESSSSE-EEEEEEETTSCEEEEEEEETTTCCEEEEEEEEC--SSCCCCCCCCCEECTTSCSE
T ss_pred ----ccCCCccceeEEEEEeCCCe-EEEEEEcCCCCeEEEEEEeCCCCcceEEEEecc--CCEEeccCCCceEcCCCCeE
Confidence 00112366899999999999 554543 34689999999987655443211 1111 267999999988
Q ss_pred ccc--CCCCcccccccccccccccccc-hhhhh--hhhhcC-CCccccccCCCCCCcccc
Q psy4571 312 ASE--SPTPTNSVHEKNYWQGLVLFDI-LVCEE--QRQLLG-TEEESSDRHSSDNDTEDL 365 (437)
Q Consensus 312 ~s~--s~d~~~~~~~~~~~~~i~~wd~-~~~~~--~~~~~~-h~~~~~~~~~~~~~~~~~ 365 (437)
+.. ..++.. .....+.+||. ..++. ...+.. +.+....+.++|+|..++
T Consensus 321 ~~~~~~~~~~~-----~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~ 375 (723)
T 1xfd_A 321 FFIRAIPQGGR-----GKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIY 375 (723)
T ss_dssp EEEEEECCSSS-----SCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEE
T ss_pred EEEEecccCCC-----cceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEE
Confidence 754 334310 01122677883 44441 556654 333333357899988654
No 150
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.82 E-value=5.6e-18 Score=158.39 Aligned_cols=187 Identities=10% Similarity=0.013 Sum_probs=140.3
Q ss_pred cceEEeeCCCCCEEEEEE--CCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCc
Q psy4571 106 RQDVAWHLLHESLFGSVA--DDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLK 183 (437)
Q Consensus 106 v~~~~~sp~~~~~l~~~~--~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~ 183 (437)
+.+++|+|+ ++.+++++ .++.|.+||+. ..+....+..+...+.+++|+|++++ +++++.++.|.+||+.+++
T Consensus 143 ~~~~~~s~d-g~~l~~~~~~~~~~i~~~d~~---~~~~~~~~~~~~~~~~~~~~s~dg~~-l~~~~~~~~i~~~d~~~~~ 217 (353)
T 3vgz_A 143 PRELVADDA-TNTVYISGIGKESVIWVVDGG---NIKLKTAIQNTGKMSTGLALDSEGKR-LYTTNADGELITIDTADNK 217 (353)
T ss_dssp EEEEEEETT-TTEEEEEEESSSCEEEEEETT---TTEEEEEECCCCTTCCCCEEETTTTE-EEEECTTSEEEEEETTTTE
T ss_pred CceEEECCC-CCEEEEEecCCCceEEEEcCC---CCceEEEecCCCCccceEEECCCCCE-EEEEcCCCeEEEEECCCCe
Confidence 678999995 55555544 57899999998 45556666545666889999999996 8888889999999999866
Q ss_pred eeeeEecc----CCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEc
Q psy4571 184 LKLHSFES----HKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWN 259 (437)
Q Consensus 184 ~~~~~~~~----h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~ 259 (437)
. ...+.. +...+..++|+|++++++++...++.|.+||+.+++.... ..... ...++|+
T Consensus 218 ~-~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~--------------~~~~~--~~~~~~s 280 (353)
T 3vgz_A 218 I-LSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAK--------------VAAPE--SLAVLFN 280 (353)
T ss_dssp E-EEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEE--------------EECSS--CCCEEEE
T ss_pred E-EEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEE--------------EEcCC--CceEEEC
Confidence 5 444432 4556889999999997666666679999999987643222 22222 2568999
Q ss_pred cCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCC
Q psy4571 260 PNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTP 318 (437)
Q Consensus 260 p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~ 318 (437)
|++++++++...++.|.+||..+++....+.. ...+..++|+|+|++++.+..++
T Consensus 281 ~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~----~~~~~~~~~s~dg~~l~v~~~~~ 335 (353)
T 3vgz_A 281 PARNEAYVTHRQAGKVSVIDAKSYKVVKTFDT----PTHPNSLALSADGKTLYVSVKQK 335 (353)
T ss_dssp TTTTEEEEEETTTTEEEEEETTTTEEEEEEEC----CSEEEEEEECTTSCEEEEEEECC
T ss_pred CCCCEEEEEECCCCeEEEEECCCCeEEEEEec----CCCCCeEEEcCCCCEEEEEEccc
Confidence 99997777777899999999999877666653 23566789999999776665443
No 151
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.82 E-value=5.4e-19 Score=177.30 Aligned_cols=249 Identities=11% Similarity=-0.010 Sum_probs=175.5
Q ss_pred cceeEEEEeeCCCcceEEEeec-cCceEeeecCCC-----------ceeEEEecCCCCeEE-Eec---CceEEEEEeee-
Q psy4571 34 IYRFYRLCVAEPFDDAVEERVI-NEEYKIWKKNTP-----------FLYDLVVNNYVANIS-CIL---NISILFFEIIF- 96 (437)
Q Consensus 34 ~~~v~~~~~~~~~~~~l~tgs~-d~~v~iw~~~~~-----------~~~~~~~~~~~~~i~-~~~---~~~i~~~~~~~- 96 (437)
...|++++|+ |+++.|+.++. |++++||+..++ .+....|+++ ..+. +.. +....+|.+..
T Consensus 21 ~~~~~~~~~~-~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~ 98 (582)
T 3o4h_A 21 AVEKYSLQGV-VDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTS 98 (582)
T ss_dssp HSCEEEEEEE-ETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETT
T ss_pred ccchheeecC-CCCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEecc
Confidence 4468899999 99999999887 999999995443 3445556655 3332 222 34566765543
Q ss_pred -cc---ccccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCC-
Q psy4571 97 -TQ---NFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSAD- 171 (437)
Q Consensus 97 -~~---~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~d- 171 (437)
.. ...........+|+|++...+++.+.++.+.+||+.++ +..... .+.. .+++|+|||+. |++++.+
T Consensus 99 ~~g~~~~l~~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g---~~~~l~-~~~~--~~~~~spDG~~-la~~~~~~ 171 (582)
T 3o4h_A 99 RPGEEQRLEAVKPMRILSGVDTGEAVVFTGATEDRVALYALDGG---GLRELA-RLPG--FGFVSDIRGDL-IAGLGFFG 171 (582)
T ss_dssp STTCCEECTTSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETT---EEEEEE-EESS--CEEEEEEETTE-EEEEEEEE
T ss_pred CCCccccccCCCCceeeeeCCCCCeEEEEecCCCCceEEEccCC---cEEEee-cCCC--ceEEECCCCCE-EEEEEEcC
Confidence 11 22223356678999966665555555666679999843 333222 2333 78999999996 8877776
Q ss_pred ---CeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCC--eEEEEEcCCCCCCCCCCCCCCCCCceEEEe
Q psy4571 172 ---KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDR--RLHVWDLSKIGEEQSTEDAEDGPPELLFIH 246 (437)
Q Consensus 172 ---g~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg--~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 246 (437)
+.|.+||+.+++ ...+..|.+.+..++|+|||+. |++++.++ .|++||+.+++.. ..
T Consensus 172 ~~~~~i~~~d~~~g~--~~~l~~~~~~~~~~~~SpDG~~-l~~~~~~~~~~i~~~d~~~~~~~---------------~~ 233 (582)
T 3o4h_A 172 GGRVSLFTSNLSSGG--LRVFDSGEGSFSSASISPGMKV-TAGLETAREARLVTVDPRDGSVE---------------DL 233 (582)
T ss_dssp TTEEEEEEEETTTCC--CEEECCSSCEEEEEEECTTSCE-EEEEECSSCEEEEEECTTTCCEE---------------EC
T ss_pred CCCeEEEEEcCCCCC--ceEeecCCCccccceECCCCCE-EEEccCCCeeEEEEEcCCCCcEE---------------Ec
Confidence 789999999865 4467788899999999999995 77888888 8999999876432 34
Q ss_pred cCccccEEEEE--------EccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCC
Q psy4571 247 GGHTAKISDFS--------WNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTP 318 (437)
Q Consensus 247 ~~h~~~v~~l~--------~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~ 318 (437)
.+|...+..++ |+|||. ++++++.|+.+++|++ ++.... ....+..++|+ +|+++++++.+.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~spdg~-~~~~~~~~g~~~l~~~--g~~~~~------~~~~v~~~~~s-dg~~l~~~s~~~ 303 (582)
T 3o4h_A 234 ELPSKDFSSYRPTAITWLGYLPDGR-LAVVARREGRSAVFID--GERVEA------PQGNHGRVVLW-RGKLVTSHTSLS 303 (582)
T ss_dssp CCSCSHHHHHCCSEEEEEEECTTSC-EEEEEEETTEEEEEET--TEEECC------CSSEEEEEEEE-TTEEEEEEEETT
T ss_pred cCCCcChhhhhhccccceeEcCCCc-EEEEEEcCCcEEEEEE--CCeecc------CCCceEEEEec-CCEEEEEEcCCC
Confidence 55655555566 999995 8999999999999999 543321 12344567889 999888877654
Q ss_pred c
Q psy4571 319 T 319 (437)
Q Consensus 319 ~ 319 (437)
.
T Consensus 304 ~ 304 (582)
T 3o4h_A 304 T 304 (582)
T ss_dssp E
T ss_pred C
Confidence 3
No 152
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.81 E-value=3.6e-18 Score=160.65 Aligned_cols=214 Identities=6% Similarity=0.019 Sum_probs=134.6
Q ss_pred CcceEEeeCCCCCEEEEEE-CCCcEEEEEcCCCCCCCCeeeecc-----------CCCCeEEEEEeCCCCcEEEEEeCCC
Q psy4571 105 SRQDVAWHLLHESLFGSVA-DDQKLMIWDTRSHNVSKPSHTVDA-----------HTAEVNCLSFNPYSEYILATGSADK 172 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~-~dg~v~vwd~~~~~~~~~~~~~~~-----------h~~~v~~l~~~~~~~~~l~sgs~dg 172 (437)
....+++ +++++++++ .++.|.+|++........+..... +...+.+++|+|+|+++++++..++
T Consensus 101 ~p~~~~~---dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~ 177 (361)
T 3scy_A 101 DPCYLTT---NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTD 177 (361)
T ss_dssp CEEEEEE---CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTT
T ss_pred CcEEEEE---CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCC
Confidence 4455666 345555554 688999999974332222211111 1234688999999997566666689
Q ss_pred eEEEEeCCCCce------e------eeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCC
Q psy4571 173 TVALWDLRNLKL------K------LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPP 240 (437)
Q Consensus 173 ~i~lwd~~~~~~------~------~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~ 240 (437)
.|.+|++..... . ......+...+..++|+|+|+++++++..++.|.+||+.++.....
T Consensus 178 ~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~--------- 248 (361)
T 3scy_A 178 QIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEI--------- 248 (361)
T ss_dssp EEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEE---------
T ss_pred EEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEe---------
Confidence 999998875431 1 1112234556789999999996555555799999999985422110
Q ss_pred ceEEEecCccccEEEEEEccCCCeEEEEEeC-CCeEEEEeCC--CCCCceeeeeeecccCCceeeeecCCCCcccccC-C
Q psy4571 241 ELLFIHGGHTAKISDFSWNPNEPWVICSVSE-DNIMQEYCDS--TDSDTKTMRLDSIRSNGGISSTASPTASSTASES-P 316 (437)
Q Consensus 241 ~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~-dg~i~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s-~ 316 (437)
..+.....+......++|+|+|++++++... ++.|.+|++. +++. ..+..... ...+..++|+|+|++|++++ .
T Consensus 249 ~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~-~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~ 326 (361)
T 3scy_A 249 QTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTL-TKVGYQLT-GIHPRNFIITPNGKYLLVACRD 326 (361)
T ss_dssp EEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCE-EEEEEEEC-SSCCCEEEECTTSCEEEEEETT
T ss_pred EEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcE-EEeeEecC-CCCCceEEECCCCCEEEEEECC
Confidence 1111123334557899999999965566666 6899999996 3432 22221111 34566789999999887776 4
Q ss_pred CCccccccccccccccc--ccchhhhhhh
Q psy4571 317 TPTNSVHEKNYWQGLVL--FDILVCEEQR 343 (437)
Q Consensus 317 d~~~~~~~~~~~~~i~~--wd~~~~~~~~ 343 (437)
++. +.+ +|..+|+...
T Consensus 327 ~~~-----------v~v~~~d~~~g~~~~ 344 (361)
T 3scy_A 327 TNV-----------IQIFERDQATGLLTD 344 (361)
T ss_dssp TTE-----------EEEEEECTTTCCEEE
T ss_pred CCC-----------EEEEEEECCCCcEee
Confidence 455 566 4666676543
No 153
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.81 E-value=1.9e-18 Score=161.16 Aligned_cols=255 Identities=8% Similarity=0.009 Sum_probs=171.5
Q ss_pred EeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeCCCCCEEE
Q psy4571 41 CVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHLLHESLFG 120 (437)
Q Consensus 41 ~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~ 120 (437)
++. +.+.++++++.++.|++||..++.+......+. ...+..++|+|++..+++
T Consensus 6 ~~~-~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~-------------------------~~~~~~~~~s~dg~~~~v 59 (349)
T 1jmx_B 6 ALK-AGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPD-------------------------KFGPGTAMMAPDNRTAYV 59 (349)
T ss_dssp CCC-TTCEEEEEEETTTEEEEEETTTTEEEEEEECSS-------------------------CCSSCEEEECTTSSEEEE
T ss_pred ccc-CCCEEEEEeCCCCeEEEEECCCCcEEEEEecCC-------------------------CCCCceeEECCCCCEEEE
Confidence 455 778889999999999999988776554322111 014568999995433556
Q ss_pred EEECCCcEEEEEcCCCCCCCCeeeeccCC------CCeEEEEEeCCCCcEEEEEeCC------------CeEEEEeCCCC
Q psy4571 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHT------AEVNCLSFNPYSEYILATGSAD------------KTVALWDLRNL 182 (437)
Q Consensus 121 ~~~~dg~v~vwd~~~~~~~~~~~~~~~h~------~~v~~l~~~~~~~~~l~sgs~d------------g~i~lwd~~~~ 182 (437)
++..++.|.+||+.+ .+.+..+..+. ..+.+++|+|+|++ +++++.+ +.|.+||+.++
T Consensus 60 ~~~~~~~i~~~d~~t---~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~-l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 135 (349)
T 1jmx_B 60 LNNHYGDIYGIDLDT---CKNTFHANLSSVPGEVGRSMYSFAISPDGKE-VYATVNPTQRLNDHYVVKPPRLEVFSTADG 135 (349)
T ss_dssp EETTTTEEEEEETTT---TEEEEEEESCCSTTEEEECSSCEEECTTSSE-EEEEEEEEEECSSCEEECCCEEEEEEGGGG
T ss_pred EeCCCCcEEEEeCCC---CcEEEEEEcccccccccccccceEECCCCCE-EEEEcccccccccccccCCCeEEEEECCCc
Confidence 666789999999983 44444443222 23788999999996 7776654 89999999874
Q ss_pred ce--eeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCC-----------------CCCce-
Q psy4571 183 KL--KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAED-----------------GPPEL- 242 (437)
Q Consensus 183 ~~--~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~-----------------~~~~~- 242 (437)
+. .+.... +...+.+++|+|+|+ +++ ++ +.|.+||+.+++.......... .+...
T Consensus 136 ~~~~~~~~~~-~~~~~~~~~~s~dg~-l~~-~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (349)
T 1jmx_B 136 LEAKPVRTFP-MPRQVYLMRAADDGS-LYV-AG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEF 210 (349)
T ss_dssp GGBCCSEEEE-CCSSCCCEEECTTSC-EEE-ES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEE
T ss_pred cccceeeecc-CCCcccceeECCCCc-EEE-cc--CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeE
Confidence 32 122333 445688999999998 555 43 3499999988764433221110 00000
Q ss_pred ------------------------------------EEEecCccccEEEEEEcc-CCCeEEEEEeCCCeEEEEeCCCCCC
Q psy4571 243 ------------------------------------LFIHGGHTAKISDFSWNP-NEPWVICSVSEDNIMQEYCDSTDSD 285 (437)
Q Consensus 243 ------------------------------------~~~~~~h~~~v~~l~~~p-~~~~~l~s~~~dg~i~iwd~~~~~~ 285 (437)
......+...+.+++|+| +++ .++++ ++.|.+||+.+++.
T Consensus 211 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~-~l~~~--~~~v~~~d~~~~~~ 287 (349)
T 1jmx_B 211 SMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPN-QIYGV--LNRLAKYDLKQRKL 287 (349)
T ss_dssp EEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTT-EEEEE--ESEEEEEETTTTEE
T ss_pred EeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCC-EEEEE--cCeEEEEECccCeE
Confidence 000111223567889999 999 55555 88999999999876
Q ss_pred ceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCC
Q psy4571 286 TKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGT 348 (437)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h 348 (437)
...+.. ...+..++|+|+|+.+++++.++. +++||..+++.+..+...
T Consensus 288 ~~~~~~----~~~~~~~~~s~dg~~l~~~~~~~~-----------v~v~d~~~~~~~~~~~~~ 335 (349)
T 1jmx_B 288 IKAANL----DHTYYCVAFDKKGDKLYLGGTFND-----------LAVFNPDTLEKVKNIKLP 335 (349)
T ss_dssp EEEEEC----SSCCCEEEECSSSSCEEEESBSSE-----------EEEEETTTTEEEEEEECS
T ss_pred EEEEcC----CCCccceEECCCCCEEEEecCCCe-----------EEEEeccccceeeeeecC
Confidence 666543 234667899999998888777766 899999998877766443
No 154
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.81 E-value=1e-18 Score=163.42 Aligned_cols=237 Identities=11% Similarity=0.102 Sum_probs=156.2
Q ss_pred CCcceEEeeCCCCCEEEEEEC--CCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEe-CCCeEEEEeCC
Q psy4571 104 LSRQDVAWHLLHESLFGSVAD--DQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGS-ADKTVALWDLR 180 (437)
Q Consensus 104 ~~v~~~~~sp~~~~~l~~~~~--dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs-~dg~i~lwd~~ 180 (437)
..+..++|+| ++++++++.. ++.|.+|++..+ ..+.+..+..+...+..++|+|+|++ |++++ .++.|.+|++.
T Consensus 40 ~~p~~~a~sp-dg~l~~~~~~~~~~~v~~~~~~~g-~~~~~~~~~~~~~~p~~~a~spdg~~-l~~~~~~~~~v~v~~~~ 116 (347)
T 3hfq_A 40 QNPTYLALSA-KDCLYSVDKEDDEGGIAAWQIDGQ-TAHKLNTVVAPGTPPAYVAVDEARQL-VYSANYHKGTAEVMKIA 116 (347)
T ss_dssp SCCCCEEECT-TCEEEEEEEETTEEEEEEEEEETT-EEEEEEEEEEESCCCSEEEEETTTTE-EEEEETTTTEEEEEEEC
T ss_pred CCcceEEEcc-CCeEEEEEecCCCceEEEEEecCC-cEEEeeeeecCCCCCEEEEECCCCCE-EEEEeCCCCEEEEEEeC
Confidence 4567899999 4555544432 689999999633 22344454556778899999999996 66655 78999999996
Q ss_pred CCce--eeeEecc---------CCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecC-
Q psy4571 181 NLKL--KLHSFES---------HKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGG- 248 (437)
Q Consensus 181 ~~~~--~~~~~~~---------h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~- 248 (437)
.... .+..+.. +...+.+++|+|+|+ +++++..++.|++|++...... ..+.....
T Consensus 117 ~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~~~~v~~~~~~~~g~~-----------~~~~~~~~~ 184 (347)
T 3hfq_A 117 ADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLGSDKVYVYNVSDAGQL-----------SEQSVLTME 184 (347)
T ss_dssp TTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETTTTEEEEEEECTTSCE-----------EEEEEEECC
T ss_pred CCCCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeCCCCEEEEEEECCCCcE-----------EEeeeEEcC
Confidence 3222 1222211 122488999999999 7888888999999999832211 11111122
Q ss_pred ccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCC--CCCceeeeeeeccc-----CCceeeeecCCCCccc-ccCCCCcc
Q psy4571 249 HTAKISDFSWNPNEPWVICSVSEDNIMQEYCDST--DSDTKTMRLDSIRS-----NGGISSTASPTASSTA-SESPTPTN 320 (437)
Q Consensus 249 h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~--~~~~~~~~~~~~~~-----~~~~~~~~s~~g~~l~-s~s~d~~~ 320 (437)
....+..++|+|+|+++++++..++.+.+|++.. ++............ ..+..++|+|||++++ +...++.
T Consensus 185 ~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~- 263 (347)
T 3hfq_A 185 AGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNT- 263 (347)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTE-
T ss_pred CCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCE-
Confidence 2235788999999997777778899999999875 33211111111111 2355679999999774 4445565
Q ss_pred cccccccccccccccchh-h--hhhhhhcCCCccccccCCCCCCccccc
Q psy4571 321 SVHEKNYWQGLVLFDILV-C--EEQRQLLGTEEESSDRHSSDNDTEDLN 366 (437)
Q Consensus 321 ~~~~~~~~~~i~~wd~~~-~--~~~~~~~~h~~~~~~~~~~~~~~~~~~ 366 (437)
+.+||+.. | +.+..+..+...+..+.++|+|..+..
T Consensus 264 ----------v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v 302 (347)
T 3hfq_A 264 ----------LAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVV 302 (347)
T ss_dssp ----------EEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEE
T ss_pred ----------EEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEE
Confidence 78888863 2 334455555556778889999975543
No 155
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.79 E-value=1.5e-18 Score=178.54 Aligned_cols=292 Identities=10% Similarity=0.052 Sum_probs=184.6
Q ss_pred EEEeeCCCcceEEEeeccCceEeeecCCCc--------------eeEEEecCCCCeEEEec----------CceEEEEEe
Q psy4571 39 RLCVAEPFDDAVEERVINEEYKIWKKNTPF--------------LYDLVVNNYVANISCIL----------NISILFFEI 94 (437)
Q Consensus 39 ~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~--------------~~~~~~~~~~~~i~~~~----------~~~i~~~~~ 94 (437)
.++|+ |++.+++++ .|+++++|+..++. +....+++++..+.... ++.|.+||+
T Consensus 20 ~~~~s-~dg~~~~~~-~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~ 97 (719)
T 1z68_A 20 FPNWI-SGQEYLHQS-ADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDL 97 (719)
T ss_dssp CCEES-SSSEEEEEC-TTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEET
T ss_pred ccEEC-CCCeEEEEc-CCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEEC
Confidence 56888 888665554 69999999976543 45677888888875443 489999998
Q ss_pred eeccc---cccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeee-ccCCCCe-----------------E
Q psy4571 95 IFTQN---FPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTV-DAHTAEV-----------------N 153 (437)
Q Consensus 95 ~~~~~---~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~-~~h~~~v-----------------~ 153 (437)
..++. ......+..++||| +++.|+.+. ++.|++||+.++ +..... .++...| .
T Consensus 98 ~~g~~~~~~~l~~~~~~~~~SP-DG~~la~~~-~~~i~~~~~~~g---~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~ 172 (719)
T 1z68_A 98 SNGEFVRGNELPRPIQYLCWSP-VGSKLAYVY-QNNIYLKQRPGD---PPFQITFNGRENKIFNGIPDWVYEEEMLATKY 172 (719)
T ss_dssp TTTEECCSSCCCSSBCCEEECS-STTCEEEEE-TTEEEEESSTTS---CCEECCCCCBTTTEEESSCCHHHHHHTTCSSC
T ss_pred CCCccccceecCcccccceECC-CCCEEEEEE-CCeEEEEeCCCC---CcEEEecCCCcCCeEcccccceeeeecccCcc
Confidence 77766 55667799999999 577777775 789999999843 222211 2222222 4
Q ss_pred EEEEeCCCCcEEEEEeCCC----------------------------------eEEEEeCCCCcee----e---eEeccC
Q psy4571 154 CLSFNPYSEYILATGSADK----------------------------------TVALWDLRNLKLK----L---HSFESH 192 (437)
Q Consensus 154 ~l~~~~~~~~~l~sgs~dg----------------------------------~i~lwd~~~~~~~----~---~~~~~h 192 (437)
+++|+|||++ |++++.|. .|++||+.+++.. + ..+.+|
T Consensus 173 ~~~wSPDG~~-la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~ 251 (719)
T 1z68_A 173 ALWWSPNGKF-LAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASS 251 (719)
T ss_dssp CEEECTTSSE-EEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTS
T ss_pred cEEECCCCCE-EEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCC
Confidence 8999999996 77776542 7899999885431 1 123457
Q ss_pred CCceEEEEEcCCCCcEEEEEeC--C--CeEEEEE----cCCCCCCCCCCCCCCCCCceEEEecCccccEE-----EEEEc
Q psy4571 193 KDEIFQVQWSPHNETILASSGT--D--RRLHVWD----LSKIGEEQSTEDAEDGPPELLFIHGGHTAKIS-----DFSWN 259 (437)
Q Consensus 193 ~~~v~~v~~~p~~~~~l~sg~~--d--g~i~vwd----~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~-----~l~~~ 259 (437)
...+..++|+||++ ++++... + ..|.+|| +.+++...... ....+|...+. .+.|+
T Consensus 252 ~~~~~~~~~SpD~~-~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~----------~~~~~~~~~~~~~~~~~~~~s 320 (719)
T 1z68_A 252 DYYFSWLTWVTDER-VCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQE----------HIEESRTGWAGGFFVSTPVFS 320 (719)
T ss_dssp CEEEEEEEESSSSE-EEEEEEESSTTEEEEEEEEECSSSSSEECCGGGE----------EEEECSSSCSSSSSCCCCEEC
T ss_pred cceEEEeEEeCCCe-EEEEEeccccCeEEEEEEcccCCCCCCceEEEEe----------cccccCCceEccccCCccEEC
Confidence 88899999999976 5666432 2 2488899 66554322200 00135555555 78999
Q ss_pred cCCCeEEE-EEeCCC--eEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCC-----Cccccccccccccc
Q psy4571 260 PNEPWVIC-SVSEDN--IMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPT-----PTNSVHEKNYWQGL 331 (437)
Q Consensus 260 p~~~~~l~-s~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d-----~~~~~~~~~~~~~i 331 (437)
|+|+.+++ +...+| .|.+||+.+++ ...+.. ....+....++ +++.++..+.+ +. .
T Consensus 321 pdg~~l~~~~~~~~g~~~l~~~~~~~~~-~~~lt~---~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~-----------~ 384 (719)
T 1z68_A 321 YDAISYYKIFSDKDGYKHIHYIKDTVEN-AIQITS---GKWEAINIFRV-TQDSLFYSSNEFEEYPGR-----------R 384 (719)
T ss_dssp TTSSCEEEEEECTTSCEEEEEESSCSTT-CEECSC---SSSCEEEEEEE-CSSEEEEEESCGGGCTTC-----------B
T ss_pred CCCCeEEEEEEccCCceEEEEEECCCCc-eEeccc---CceEEEEEEEE-eCCEEEEEEecCCCCCce-----------E
Confidence 99995554 344555 57777887765 233221 12223344555 66666555443 44 5
Q ss_pred ccccchh--hh-hhhh----hcCCCccccccCCCCCCcccc
Q psy4571 332 VLFDILV--CE-EQRQ----LLGTEEESSDRHSSDNDTEDL 365 (437)
Q Consensus 332 ~~wd~~~--~~-~~~~----~~~h~~~~~~~~~~~~~~~~~ 365 (437)
++|.+.. +. .... +.+|...+....+++++..++
T Consensus 385 ~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~ 425 (719)
T 1z68_A 385 NIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYA 425 (719)
T ss_dssp EEEEEECSSSSCCEEESSTTTTTTTBCBEEEEECGGGSSEE
T ss_pred EEEEEeCCCCCCCceeccCccCCCCCceEEEEECCCCCEEE
Confidence 6666543 31 1122 233555555667777776544
No 156
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.77 E-value=1.2e-16 Score=150.49 Aligned_cols=211 Identities=11% Similarity=0.092 Sum_probs=133.6
Q ss_pred cceEEeeCCCCC--EEEEEE-------------CCCcEEEEEcCCCCCCCCeeeec----cCCCCeEEEEEeCCCCcEEE
Q psy4571 106 RQDVAWHLLHES--LFGSVA-------------DDQKLMIWDTRSHNVSKPSHTVD----AHTAEVNCLSFNPYSEYILA 166 (437)
Q Consensus 106 v~~~~~sp~~~~--~l~~~~-------------~dg~v~vwd~~~~~~~~~~~~~~----~h~~~v~~l~~~~~~~~~l~ 166 (437)
+.+++|+| +++ +++++. .+|.+.+|++... ++....+. .+...+.+++|+|+|++ ++
T Consensus 85 ~~~~~~sp-dg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~spdG~~-l~ 160 (365)
T 1jof_A 85 PRANDADT-NTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSET--GKLEKNVQNYEYQENTGIHGMVFDPTETY-LY 160 (365)
T ss_dssp GGGGCTTS-CCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTT--CCEEEEEEEEECCTTCCEEEEEECTTSSE-EE
T ss_pred CccEEECC-CCCEEEEEEecCCcceeccceeecCCceEEEEccCCC--CcCcceEeeEEeCCCCcceEEEECCCCCE-EE
Confidence 56789999 455 344442 6899999999732 22222222 24567999999999996 55
Q ss_pred EEe-CCCeEEEEeCC-CCcee-eeEec--cCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCC--CCCCCCCCCCCCCC
Q psy4571 167 TGS-ADKTVALWDLR-NLKLK-LHSFE--SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK--IGEEQSTEDAEDGP 239 (437)
Q Consensus 167 sgs-~dg~i~lwd~~-~~~~~-~~~~~--~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~--~~~~~~~~~~~~~~ 239 (437)
++. .++.|.+||++ +++.. +..+. .|...+..++|+|+|++++++...++.|.+|++.. +......
T Consensus 161 ~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~------- 233 (365)
T 1jof_A 161 SADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTH------- 233 (365)
T ss_dssp EEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEE-------
T ss_pred EEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEcc-------
Confidence 554 47899999998 55432 22232 24567899999999996444444578999998763 2211000
Q ss_pred CceEEEe----cCccc------cEEEEE-EccCCCeEEEEEeCCC-----eEEEEeCC-CCCCceeeeeeecccCCceee
Q psy4571 240 PELLFIH----GGHTA------KISDFS-WNPNEPWVICSVSEDN-----IMQEYCDS-TDSDTKTMRLDSIRSNGGISS 302 (437)
Q Consensus 240 ~~~~~~~----~~h~~------~v~~l~-~~p~~~~~l~s~~~dg-----~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~ 302 (437)
..+..+ .+|.. .+..++ |+|+|++++++...++ .|.+|++. +++..............+..+
T Consensus 234 -~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~ 312 (365)
T 1jof_A 234 -HSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSN 312 (365)
T ss_dssp -EEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCC
T ss_pred -ceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccc
Confidence 001111 12332 588999 9999995554443333 89999996 454322111111123456678
Q ss_pred eecC---CCCcccccCCC-Ccccccccccccccccccchhh
Q psy4571 303 TASP---TASSTASESPT-PTNSVHEKNYWQGLVLFDILVC 339 (437)
Q Consensus 303 ~~s~---~g~~l~s~s~d-~~~~~~~~~~~~~i~~wd~~~~ 339 (437)
+++| ||++|+++..+ +. +++|++...
T Consensus 313 a~sp~~~dg~~l~v~~~~~~~-----------v~v~~~~~~ 342 (365)
T 1jof_A 313 AVSPCPWSDEWMAITDDQEGW-----------LEIYRWKDE 342 (365)
T ss_dssp CEEECTTCTTEEEEECSSSCE-----------EEEEEEETT
T ss_pred eecCCCcCCCEEEEEEcCCCe-----------EEEEEEchh
Confidence 9999 89999888764 56 677777654
No 157
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.77 E-value=5.2e-17 Score=152.71 Aligned_cols=242 Identities=10% Similarity=0.052 Sum_probs=153.8
Q ss_pred CCcceEEeeCCCCCEEEEEECC----CcEEEEEcCCC-CCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEe
Q psy4571 104 LSRQDVAWHLLHESLFGSVADD----QKLMIWDTRSH-NVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWD 178 (437)
Q Consensus 104 ~~v~~~~~sp~~~~~l~~~~~d----g~v~vwd~~~~-~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd 178 (437)
..+..++|+| ++++|++++.+ +.|.+|++... ...+.+.....+......+++ ++++++++...++.|.+|+
T Consensus 50 ~~p~~l~~sp-dg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~ 126 (361)
T 3scy_A 50 ANPSYLIPSA-DGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFP 126 (361)
T ss_dssp SCCCSEEECT-TSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEE
T ss_pred CCCceEEECC-CCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEE
Confidence 4567899999 57778888775 79999998742 122334444445567788888 7886555555789999999
Q ss_pred CCCCcee--eeEe---c--------cCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCC----C-CCCCCCCCCCC
Q psy4571 179 LRNLKLK--LHSF---E--------SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGE----E-QSTEDAEDGPP 240 (437)
Q Consensus 179 ~~~~~~~--~~~~---~--------~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~----~-~~~~~~~~~~~ 240 (437)
+...... .... . .+...+.+++|+|+|+++++++..++.|.+|++..... . .... .
T Consensus 127 ~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~------~ 200 (361)
T 3scy_A 127 IGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTK------G 200 (361)
T ss_dssp BCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEE------E
T ss_pred eCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeec------c
Confidence 9754321 1111 1 11234688999999997666666789999999876432 0 0000 0
Q ss_pred ceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCce--eeeeeecccCCceeeeecCCCCcccccCC--
Q psy4571 241 ELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTK--TMRLDSIRSNGGISSTASPTASSTASESP-- 316 (437)
Q Consensus 241 ~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~--~~~~~~~~~~~~~~~~~s~~g~~l~s~s~-- 316 (437)
........+...+..++|+|+|+++++++..++.|.+||+.+++... .+.....+......++|+|||++|+++..
T Consensus 201 ~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~ 280 (361)
T 3scy_A 201 TPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLK 280 (361)
T ss_dssp EEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSS
T ss_pred cccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCC
Confidence 00011223345678999999999555555579999999998764322 22211112233457799999998865544
Q ss_pred CCcccccccccccccccccch--hhh--hhhhhcCCCccccccCCCCCCccccc
Q psy4571 317 TPTNSVHEKNYWQGLVLFDIL--VCE--EQRQLLGTEEESSDRHSSDNDTEDLN 366 (437)
Q Consensus 317 d~~~~~~~~~~~~~i~~wd~~--~~~--~~~~~~~h~~~~~~~~~~~~~~~~~~ 366 (437)
++. +.+|++. +|+ .+..+.. ...+..+.++|+|+.+..
T Consensus 281 ~~~-----------i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~ 322 (361)
T 3scy_A 281 ADG-----------VAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLV 322 (361)
T ss_dssp SCE-----------EEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEE
T ss_pred CCE-----------EEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEE
Confidence 355 7888874 444 2333333 345677889999975443
No 158
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.75 E-value=7.8e-18 Score=173.12 Aligned_cols=263 Identities=13% Similarity=0.087 Sum_probs=166.0
Q ss_pred EEEecCCCCeEEEecCceEEEEEeeeccccccC-------CCcceEEeeCCCCCEEEEEEC---------CCcEEEEEcC
Q psy4571 71 DLVVNNYVANISCILNISILFFEIIFTQNFPFP-------LSRQDVAWHLLHESLFGSVAD---------DQKLMIWDTR 134 (437)
Q Consensus 71 ~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~-------~~v~~~~~sp~~~~~l~~~~~---------dg~v~vwd~~ 134 (437)
+..|++++..+....++.|++||...++..... ..+.+++||| ++++|+.++. ++.|++||+.
T Consensus 20 ~~~~s~dg~~~~~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~Sp-Dg~~la~~~~~~~~~~~s~~~~i~~~d~~ 98 (719)
T 1z68_A 20 FPNWISGQEYLHQSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSP-DRQFVYLESDYSKLWRYSYTATYYIYDLS 98 (719)
T ss_dssp CCEESSSSEEEEECTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECT-TSSEEEEEEEEEECSSSCEEEEEEEEETT
T ss_pred ccEECCCCeEEEEcCCCCEEEEEcCCCcEEEEEccccccccceeeEEECC-CCCeEEEEecCceeEEeecceEEEEEECC
Confidence 556777776666667899999998765543221 2489999999 6788887776 6899999998
Q ss_pred CCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCce-----------------E
Q psy4571 135 SHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEI-----------------F 197 (437)
Q Consensus 135 ~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v-----------------~ 197 (437)
++..... ..+ ...+..++|||||+. |+.+. ++.|++||+.+++.......++...| .
T Consensus 99 ~g~~~~~-~~l---~~~~~~~~~SPDG~~-la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~ 172 (719)
T 1z68_A 99 NGEFVRG-NEL---PRPIQYLCWSPVGSK-LAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKY 172 (719)
T ss_dssp TTEECCS-SCC---CSSBCCEEECSSTTC-EEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSC
T ss_pred CCccccc-eec---CcccccceECCCCCE-EEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcc
Confidence 5422000 112 246889999999997 77765 78999999988654221222333322 4
Q ss_pred EEEEcCCCCcEEEEEeCCC----------------------------------eEEEEEcCCCCCCCCCCCCCCCCCceE
Q psy4571 198 QVQWSPHNETILASSGTDR----------------------------------RLHVWDLSKIGEEQSTEDAEDGPPELL 243 (437)
Q Consensus 198 ~v~~~p~~~~~l~sg~~dg----------------------------------~i~vwd~~~~~~~~~~~~~~~~~~~~~ 243 (437)
+++|+|||+. |++++.|. .|++||+.++....... . ..-
T Consensus 173 ~~~wSPDG~~-la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~---~---~~~ 245 (719)
T 1z68_A 173 ALWWSPNGKF-LAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQE---V---PVP 245 (719)
T ss_dssp CEEECTTSSE-EEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEE---C---CCC
T ss_pred cEEECCCCCE-EEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeE---c---cCC
Confidence 8999999995 67666442 78899988754310000 0 000
Q ss_pred EEecCccccEEEEEEccCCCeEEEEEeCC----CeEEEEe----CCCCCCceeeee-eecccCCce-----eeeecCCCC
Q psy4571 244 FIHGGHTAKISDFSWNPNEPWVICSVSED----NIMQEYC----DSTDSDTKTMRL-DSIRSNGGI-----SSTASPTAS 309 (437)
Q Consensus 244 ~~~~~h~~~v~~l~~~p~~~~~l~s~~~d----g~i~iwd----~~~~~~~~~~~~-~~~~~~~~~-----~~~~s~~g~ 309 (437)
..+.+|...+..++|+||++ ++++.... ..|.+|| +.+++....+.. ...+..... ...|+|||+
T Consensus 246 ~~~~~~~~~~~~~~~SpD~~-~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~ 324 (719)
T 1z68_A 246 AMIASSDYYFSWLTWVTDER-VCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAI 324 (719)
T ss_dssp HHHHTSCEEEEEEEESSSSE-EEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSS
T ss_pred ccCCCCcceEEEeEEeCCCe-EEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCC
Confidence 11346788899999999976 66664322 3488899 877766554420 011122222 568999999
Q ss_pred cccc--cCCCCcccccccccccccccccchhhhhhhhhcCCCccccccCCC
Q psy4571 310 STAS--ESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHSS 358 (437)
Q Consensus 310 ~l~s--~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~ 358 (437)
.++. ...++. ..+.+||+.+++ ...+..+...+....+.
T Consensus 325 ~l~~~~~~~~g~---------~~l~~~~~~~~~-~~~lt~~~~~v~~~~~~ 365 (719)
T 1z68_A 325 SYYKIFSDKDGY---------KHIHYIKDTVEN-AIQITSGKWEAINIFRV 365 (719)
T ss_dssp CEEEEEECTTSC---------EEEEEESSCSTT-CEECSCSSSCEEEEEEE
T ss_pred eEEEEEEccCCc---------eEEEEEECCCCc-eEecccCceEEEEEEEE
Confidence 6654 334442 227788887766 45555554444443333
No 159
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.75 E-value=3.4e-17 Score=164.17 Aligned_cols=253 Identities=14% Similarity=0.031 Sum_probs=171.9
Q ss_pred CceeEEEecCCCCeEEE-ec-CceEEEEEeeeccccc---cC-CCcceEEeeCCCCCEEEEEEC---CCcEEEEEcCCCC
Q psy4571 67 PFLYDLVVNNYVANISC-IL-NISILFFEIIFTQNFP---FP-LSRQDVAWHLLHESLFGSVAD---DQKLMIWDTRSHN 137 (437)
Q Consensus 67 ~~~~~~~~~~~~~~i~~-~~-~~~i~~~~~~~~~~~~---~~-~~v~~~~~sp~~~~~l~~~~~---dg~v~vwd~~~~~ 137 (437)
..++.+.+++++..++. .. +++++||++..++... +. ..+..++|+| + .++++++. +...++|.+....
T Consensus 22 ~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~sp-d-~~l~~~~~~~g~~~~~l~~~~~~~ 99 (582)
T 3o4h_A 22 VEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGV-G-RVILVRDVSKGAEQHALFKVNTSR 99 (582)
T ss_dssp SCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTC-S-EEEEEEECSTTSCCEEEEEEETTS
T ss_pred cchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCC-C-eEEEEeccCCCCcceEEEEEeccC
Confidence 45788888888887754 33 8899999975443322 23 3688999999 4 67777765 4556776665311
Q ss_pred CCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCC--
Q psy4571 138 VSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTD-- 215 (437)
Q Consensus 138 ~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~d-- 215 (437)
..... .+... ..+...+|+|+++.++++++.++.+.+||+.+++. ..+..+.. .+++|+|||+. +++++.|
T Consensus 100 ~g~~~-~l~~~-~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~--~~l~~~~~--~~~~~spDG~~-la~~~~~~~ 172 (582)
T 3o4h_A 100 PGEEQ-RLEAV-KPMRILSGVDTGEAVVFTGATEDRVALYALDGGGL--RELARLPG--FGFVSDIRGDL-IAGLGFFGG 172 (582)
T ss_dssp TTCCE-ECTTS-CSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEE--EEEEEESS--CEEEEEEETTE-EEEEEEEET
T ss_pred CCccc-cccCC-CCceeeeeCCCCCeEEEEecCCCCceEEEccCCcE--EEeecCCC--ceEEECCCCCE-EEEEEEcCC
Confidence 11222 33222 23556789999876555555555666999988653 33333333 88999999995 7766666
Q ss_pred --CeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCC--eEEEEeCCCCCCceeeee
Q psy4571 216 --RRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN--IMQEYCDSTDSDTKTMRL 291 (437)
Q Consensus 216 --g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~ 291 (437)
+.|++||+.+++. ..+..|...+..++|+|||+ .|+++..++ .|++||+.+++.. .+..
T Consensus 173 ~~~~i~~~d~~~g~~---------------~~l~~~~~~~~~~~~SpDG~-~l~~~~~~~~~~i~~~d~~~~~~~-~~~~ 235 (582)
T 3o4h_A 173 GRVSLFTSNLSSGGL---------------RVFDSGEGSFSSASISPGMK-VTAGLETAREARLVTVDPRDGSVE-DLEL 235 (582)
T ss_dssp TEEEEEEEETTTCCC---------------EEECCSSCEEEEEEECTTSC-EEEEEECSSCEEEEEECTTTCCEE-ECCC
T ss_pred CCeEEEEEcCCCCCc---------------eEeecCCCccccceECCCCC-EEEEccCCCeeEEEEEcCCCCcEE-EccC
Confidence 7799999987542 23567888899999999999 566888888 8999999988655 2221
Q ss_pred eecccCCceeee--------ecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCCccccccCCCCCCcc
Q psy4571 292 DSIRSNGGISST--------ASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHSSDNDTE 363 (437)
Q Consensus 292 ~~~~~~~~~~~~--------~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~~~~~ 363 (437)
+...+...+ |+|||.++++++.++. +++|++ |+.... ....+..+.++ ++..
T Consensus 236 ---~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~-----------~~l~~~--g~~~~~---~~~~v~~~~~s-dg~~ 295 (582)
T 3o4h_A 236 ---PSKDFSSYRPTAITWLGYLPDGRLAVVARREGR-----------SAVFID--GERVEA---PQGNHGRVVLW-RGKL 295 (582)
T ss_dssp ---SCSHHHHHCCSEEEEEEECTTSCEEEEEEETTE-----------EEEEET--TEEECC---CSSEEEEEEEE-TTEE
T ss_pred ---CCcChhhhhhccccceeEcCCCcEEEEEEcCCc-----------EEEEEE--CCeecc---CCCceEEEEec-CCEE
Confidence 222333446 9999988888988887 788888 655442 23446666777 6665
Q ss_pred cc
Q psy4571 364 DL 365 (437)
Q Consensus 364 ~~ 365 (437)
+.
T Consensus 296 l~ 297 (582)
T 3o4h_A 296 VT 297 (582)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 160
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.74 E-value=7.3e-16 Score=142.79 Aligned_cols=227 Identities=11% Similarity=0.035 Sum_probs=160.0
Q ss_pred eeEEEEeeCCCcce-EEEeeccCceEeeecCCCcee----------------EEEecCCCCeEEEe-------------c
Q psy4571 36 RFYRLCVAEPFDDA-VEERVINEEYKIWKKNTPFLY----------------DLVVNNYVANISCI-------------L 85 (437)
Q Consensus 36 ~v~~~~~~~~~~~~-l~tgs~d~~v~iw~~~~~~~~----------------~~~~~~~~~~i~~~-------------~ 85 (437)
.+..++|+ |+++. +++++.++.|.+|+..++... .+.+++++..+.+. .
T Consensus 35 ~~~~~~~s-~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~ 113 (337)
T 1pby_B 35 TPMVPMVA-PGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQ 113 (337)
T ss_dssp CCCCEEEC-TTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEEC
T ss_pred CccceEEc-CCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEeccccccccccccc
Confidence 36778999 88865 466677889999997654433 34455666666444 4
Q ss_pred CceEEEEEeeecc---ccccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCC--CCeEEEEEeCC
Q psy4571 86 NISILFFEIIFTQ---NFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHT--AEVNCLSFNPY 160 (437)
Q Consensus 86 ~~~i~~~~~~~~~---~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~--~~v~~l~~~~~ 160 (437)
++.|.+||....+ .+.....+.+++|+| ++++++++ ++.|.+||+.+ .+....+..+. .+ +.|+|+
T Consensus 114 ~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~--~~~i~~~d~~~---~~~~~~~~~~~~~~~---~~~s~d 184 (337)
T 1pby_B 114 PTRVALYDAETLSRRKAFEAPRQITMLAWAR-DGSKLYGL--GRDLHVMDPEA---GTLVEDKPIQSWEAE---TYAQPD 184 (337)
T ss_dssp CCEEEEEETTTTEEEEEEECCSSCCCEEECT-TSSCEEEE--SSSEEEEETTT---TEEEEEECSTTTTTT---TBCCCB
T ss_pred CceEEEEECCCCcEEEEEeCCCCcceeEECC-CCCEEEEe--CCeEEEEECCC---CcEeeeeeccccCCC---ceeCCC
Confidence 6899999975433 233456788999999 56656666 68999999983 44444444333 33 378999
Q ss_pred CCcEEEEEeCCC-----------------------eEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCe
Q psy4571 161 SEYILATGSADK-----------------------TVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRR 217 (437)
Q Consensus 161 ~~~~l~sgs~dg-----------------------~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~ 217 (437)
+..+++++..++ .|.+||+++++.....+..+...+.+++|+|++++ ++++ ++.
T Consensus 185 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~-l~~~--~~~ 261 (337)
T 1pby_B 185 VLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTR-AFGA--YNV 261 (337)
T ss_dssp CCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSE-EEEE--ESE
T ss_pred ccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCE-EEEe--CCe
Confidence 987444443443 46899999876543445566778899999999985 5555 789
Q ss_pred EEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeee
Q psy4571 218 LHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRL 291 (437)
Q Consensus 218 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 291 (437)
|.+||+.+++. +..+.. ...+.+++|+|+|+ .+++++.++.|++||+.+++.+..+..
T Consensus 262 v~~~d~~~~~~--------------~~~~~~-~~~~~~~~~s~dg~-~l~~~~~~~~i~v~d~~~~~~~~~~~~ 319 (337)
T 1pby_B 262 LESFDLEKNAS--------------IKRVPL-PHSYYSVNVSTDGS-TVWLGGALGDLAAYDAETLEKKGQVDL 319 (337)
T ss_dssp EEEEETTTTEE--------------EEEEEC-SSCCCEEEECTTSC-EEEEESBSSEEEEEETTTCCEEEEEEC
T ss_pred EEEEECCCCcC--------------cceecC-CCceeeEEECCCCC-EEEEEcCCCcEEEEECcCCcEEEEEEc
Confidence 99999987532 222322 23578899999999 555678899999999999987777664
No 161
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.74 E-value=3.9e-16 Score=148.02 Aligned_cols=273 Identities=11% Similarity=0.019 Sum_probs=166.0
Q ss_pred EEeeCCCcceEEEeec-cCc--eEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeCCCC
Q psy4571 40 LCVAEPFDDAVEERVI-NEE--YKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHLLHE 116 (437)
Q Consensus 40 ~~~~~~~~~~l~tgs~-d~~--v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp~~~ 116 (437)
.+|+ |+++.|+..+. ++. +.+|+..++....+... ....+..++|+| ++
T Consensus 41 ~~~S-pDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~--------------------------~~~~~~~~~~sp-dg 92 (388)
T 3pe7_A 41 KCFT-RDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEG--------------------------RGDNTFGGFLSP-DD 92 (388)
T ss_dssp CCBC-TTSCEEEEEECTTSSCEEEEEETTTCEEEECCCS--------------------------SCBCSSSCEECT-TS
T ss_pred ccCC-CCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeC--------------------------CCCCccceEEcC-CC
Confidence 6778 88888888776 554 55556655554432110 011233578999 67
Q ss_pred CEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEE--EeCCCCcEEEEE----------------------eCCC
Q psy4571 117 SLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLS--FNPYSEYILATG----------------------SADK 172 (437)
Q Consensus 117 ~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~--~~~~~~~~l~sg----------------------s~dg 172 (437)
..|+.++.++.|++||+.+ .+.......+...+.... ++|++.. ++.. ..+.
T Consensus 93 ~~l~~~~~~~~l~~~d~~~---g~~~~~~~~~~~~~~~~~~~~~~dg~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (388)
T 3pe7_A 93 DALFYVKDGRNLMRVDLAT---LEENVVYQVPAEWVGYGTWVANSDCTK-LVGIEIRREDWVPLTDWKKFHEFYFTKPCC 168 (388)
T ss_dssp SEEEEEETTTEEEEEETTT---CCEEEEEECCTTEEEEEEEEECTTSSE-EEEEEEEGGGCCCCCSHHHHHHHGGGCCCE
T ss_pred CEEEEEeCCCeEEEEECCC---CcceeeeechhhcccccceeECCCCCe-eccccccCcccccccccchhhhhhccCCcc
Confidence 8888999899999999984 344444445555554444 4899985 5532 2457
Q ss_pred eEEEEeCCCCceeeeEeccCCCceEEEEEcC-CCCcEEEEEeCC------CeEEEEEcCCCCCCCCCCCCCCCCCceEEE
Q psy4571 173 TVALWDLRNLKLKLHSFESHKDEIFQVQWSP-HNETILASSGTD------RRLHVWDLSKIGEEQSTEDAEDGPPELLFI 245 (437)
Q Consensus 173 ~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p-~~~~~l~sg~~d------g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~ 245 (437)
.|.+||+.+++ ...+..+...+..++|+| +|+. ++..+.+ ..|.++|+...... .
T Consensus 169 ~l~~~d~~~g~--~~~l~~~~~~~~~~~~sp~dg~~-l~~~~~~~~~~~~~~l~~~d~~~~~~~---------------~ 230 (388)
T 3pe7_A 169 RLMRVDLKTGE--STVILQENQWLGHPIYRPYDDST-VAFCHEGPHDLVDARMWLINEDGTNMR---------------K 230 (388)
T ss_dssp EEEEEETTTCC--EEEEEEESSCEEEEEEETTEEEE-EEEEECSCTTTSSCSEEEEETTSCCCE---------------E
T ss_pred eEEEEECCCCc--eEEeecCCccccccEECCCCCCE-EEEEEecCCCCCcceEEEEeCCCCceE---------------E
Confidence 89999999865 444555677899999999 9985 5554433 36888887654321 1
Q ss_pred ecCcc--ccEEEEEEccCCCeEEEEEeCCC----eEEEEeCCCCCCceeeeeeeccc--CCceeeeecCCCCcccccCCC
Q psy4571 246 HGGHT--AKISDFSWNPNEPWVICSVSEDN----IMQEYCDSTDSDTKTMRLDSIRS--NGGISSTASPTASSTASESPT 317 (437)
Q Consensus 246 ~~~h~--~~v~~l~~~p~~~~~l~s~~~dg----~i~iwd~~~~~~~~~~~~~~~~~--~~~~~~~~s~~g~~l~s~s~d 317 (437)
+..+. ..+..++|+|+|+.+++.+..++ .|++||+.+++............ .......|+|||+.++....+
T Consensus 231 l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~ 310 (388)
T 3pe7_A 231 VKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQD 310 (388)
T ss_dssp SCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------
T ss_pred eeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeee
Confidence 22233 35788999999996544443322 39999999986533222211000 001223799999988865322
Q ss_pred CcccccccccccccccccchhhhhhhhhcCCCc-----------cccccCCCCCCcccc
Q psy4571 318 PTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEE-----------ESSDRHSSDNDTEDL 365 (437)
Q Consensus 318 ~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~-----------~~~~~~~~~~~~~~~ 365 (437)
+.. +.......|.+||+.+++. ..+..+.. .+....++|+|+.++
T Consensus 311 ~~~--~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~ 366 (388)
T 3pe7_A 311 DSG--YKIENDPFLYVFNMKNGTQ-HRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQIL 366 (388)
T ss_dssp --------CCCCEEEEEETTTTEE-EEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEE
T ss_pred ccc--cccCCCCEEEEEeccCCce-EEeccccCcccccccccccCCCCccCCCCCCEEE
Confidence 100 0000112289999988765 45655554 467778999997554
No 162
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.72 E-value=1.1e-15 Score=141.81 Aligned_cols=268 Identities=10% Similarity=0.060 Sum_probs=179.1
Q ss_pred cceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccc-----cCCCcce
Q psy4571 34 IYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFP-----FPLSRQD 108 (437)
Q Consensus 34 ~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~-----~~~~v~~ 108 (437)
.-.+..++++ |+++++++.+.++.++++.......+..... ....++.|.+||...++... .-..+..
T Consensus 23 l~~v~~va~d-~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~g 95 (329)
T 3fvz_A 23 PGQVSGVALD-SKNNLVIFHRGDHVWDGNSFDSKFVYQQRGL------GPIEEDTILVIDPNNAEILQSSGKNLFYLPHG 95 (329)
T ss_dssp CSCEEEEEEC-TTCCEEEEECTTCCCCTTSBCTTSCBSCGGG------CSCCSCCEEEECTTTCCEEEEECTTTCSSEEE
T ss_pred cCCceEEEEC-CCCCEEEEeCCCCeEEeeccCcceeeccccc------ccccCCcEEEEECCCCeEEeccCCCccCCceE
Confidence 3458889999 9999999999887766665544333321100 11145566777654322211 1236789
Q ss_pred EEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeee---------ccCCCCeEEEEEeC-CCCcEEEEEe-CCCeEEEE
Q psy4571 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTV---------DAHTAEVNCLSFNP-YSEYILATGS-ADKTVALW 177 (437)
Q Consensus 109 ~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~---------~~h~~~v~~l~~~~-~~~~~l~sgs-~dg~i~lw 177 (437)
++++| +++++++...++.|++||.... ...+..+ .++......++++| ++. ++++.+ .++.|++|
T Consensus 96 ia~d~-~g~l~v~d~~~~~v~~~~~~g~--~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~-lyv~d~~~~~~I~~~ 171 (329)
T 3fvz_A 96 LSIDT-DGNYWVTDVALHQVFKLDPHSK--EGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGA-VFVSDGYCNSRIVQF 171 (329)
T ss_dssp EEECT-TSCEEEEETTTTEEEEECTTCS--SCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCC-EEEEECSSCCEEEEE
T ss_pred EEECC-CCCEEEEECCCCEEEEEeCCCC--eEEEEEecccCCCCCCccccCCCcEEEEeCCCCe-EEEEeCCCCCeEEEE
Confidence 99999 5778888888999999998632 1134444 34455789999999 565 677776 69999999
Q ss_pred eCCCCceeeeEecc----------CCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEec
Q psy4571 178 DLRNLKLKLHSFES----------HKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHG 247 (437)
Q Consensus 178 d~~~~~~~~~~~~~----------h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (437)
|.. +.. +..+.. +-.....++++|++..++++...++.|++||..+++.... ....
T Consensus 172 ~~~-g~~-~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~------------~~~~ 237 (329)
T 3fvz_A 172 SPS-GKF-VTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVRE------------IKHA 237 (329)
T ss_dssp CTT-SCE-EEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEE------------ECCT
T ss_pred cCC-CCE-EEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEE------------Eecc
Confidence 954 343 444432 2234789999999445788888899999999985543222 1113
Q ss_pred CccccEEEEEEcc------CCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCccc
Q psy4571 248 GHTAKISDFSWNP------NEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNS 321 (437)
Q Consensus 248 ~h~~~v~~l~~~p------~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~ 321 (437)
.+...+.+++|+| +|. +.++...+..|++||..+++.+..+.....+...+..++++|+|.++++...++.
T Consensus 238 ~~~~~~~~~~~~pg~~~~~~g~-~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~-- 314 (329)
T 3fvz_A 238 SFGRNVFAISYIPGFLFAVNGK-PYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNT-- 314 (329)
T ss_dssp TTTTCEEEEEEETTEEEEEECC-CCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCC--
T ss_pred ccCCCcceeeecCCEEEEeCCC-EEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCE--
Confidence 4556788999999 332 2222334568999999999877765422234455677899999988888888777
Q ss_pred ccccccccccccccchh
Q psy4571 322 VHEKNYWQGLVLFDILV 338 (437)
Q Consensus 322 ~~~~~~~~~i~~wd~~~ 338 (437)
|++|++..
T Consensus 315 ---------I~~~~~~~ 322 (329)
T 3fvz_A 315 ---------VWKFTLTE 322 (329)
T ss_dssp ---------EEEEEEEE
T ss_pred ---------EEEEeCCc
Confidence 77777653
No 163
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.71 E-value=4.5e-17 Score=151.88 Aligned_cols=223 Identities=9% Similarity=-0.029 Sum_probs=153.9
Q ss_pred eEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCC-CCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceee
Q psy4571 108 DVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHT-AEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKL 186 (437)
Q Consensus 108 ~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~-~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~ 186 (437)
.+++++ ++.++++++.++.|.+||+. ..+.+..+..+. ..+..++|+|+++.+++++..++.|.+||+.+++. .
T Consensus 4 g~~~~~-~~~~~v~~~~~~~v~~~d~~---~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~-~ 78 (349)
T 1jmx_B 4 GPALKA-GHEYMIVTNYPNNLHVVDVA---SDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKN-T 78 (349)
T ss_dssp CCCCCT-TCEEEEEEETTTEEEEEETT---TTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEE-E
T ss_pred cccccC-CCEEEEEeCCCCeEEEEECC---CCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcE-E
Confidence 456777 67889999999999999998 445555554333 25788999999987566777899999999998664 4
Q ss_pred eEecc-C-----CCceEEEEEcCCCCcEEEEEeCC------------CeEEEEEcCCCCCCCCCCCCCCCCCceEEEecC
Q psy4571 187 HSFES-H-----KDEIFQVQWSPHNETILASSGTD------------RRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGG 248 (437)
Q Consensus 187 ~~~~~-h-----~~~v~~v~~~p~~~~~l~sg~~d------------g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (437)
..+.. + ...+..++|+|+|++ +++++.+ +.|.+||+.++..... +.....
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~spdg~~-l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~-----------~~~~~~ 146 (349)
T 1jmx_B 79 FHANLSSVPGEVGRSMYSFAISPDGKE-VYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKP-----------VRTFPM 146 (349)
T ss_dssp EEEESCCSTTEEEECSSCEEECTTSSE-EEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCC-----------SEEEEC
T ss_pred EEEEcccccccccccccceEECCCCCE-EEEEcccccccccccccCCCeEEEEECCCccccce-----------eeeccC
Confidence 44432 2 223788999999996 5666544 8999999987543221 122222
Q ss_pred ccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeec----------------------------------
Q psy4571 249 HTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSI---------------------------------- 294 (437)
Q Consensus 249 h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~---------------------------------- 294 (437)
...+.+++|+|+|+ +++ ++ +.|++||+.+++....+.....
T Consensus 147 -~~~~~~~~~s~dg~-l~~-~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 221 (349)
T 1jmx_B 147 -PRQVYLMRAADDGS-LYV-AG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKD 221 (349)
T ss_dssp -CSSCCCEEECTTSC-EEE-ES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC--
T ss_pred -CCcccceeECCCCc-EEE-cc--CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCC
Confidence 33578899999999 665 33 3499999998876655432210
Q ss_pred -------------------------------ccCCceeeeecC-CCCcccccCCCCcccccccccccccccccchhhhhh
Q psy4571 295 -------------------------------RSNGGISSTASP-TASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQ 342 (437)
Q Consensus 295 -------------------------------~~~~~~~~~~s~-~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~ 342 (437)
.......++++| +|++++++ ++. +.+||+.+++.+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~-----------v~~~d~~~~~~~ 288 (349)
T 1jmx_B 222 DKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNR-----------LAKYDLKQRKLI 288 (349)
T ss_dssp -----CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESE-----------EEEEETTTTEEE
T ss_pred CcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCe-----------EEEEECccCeEE
Confidence 000122346678 88888777 444 899999999887
Q ss_pred hhhcCCCccccccCCCCCCccccc
Q psy4571 343 RQLLGTEEESSDRHSSDNDTEDLN 366 (437)
Q Consensus 343 ~~~~~h~~~~~~~~~~~~~~~~~~ 366 (437)
..+.... .+..+.++|+|..+..
T Consensus 289 ~~~~~~~-~~~~~~~s~dg~~l~~ 311 (349)
T 1jmx_B 289 KAANLDH-TYYCVAFDKKGDKLYL 311 (349)
T ss_dssp EEEECSS-CCCEEEECSSSSCEEE
T ss_pred EEEcCCC-CccceEECCCCCEEEE
Confidence 7765433 3667889999876554
No 164
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.71 E-value=8.9e-16 Score=158.23 Aligned_cols=253 Identities=12% Similarity=0.062 Sum_probs=161.2
Q ss_pred eEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeCCCC
Q psy4571 37 FYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHLLHE 116 (437)
Q Consensus 37 v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp~~~ 116 (437)
.+++.|. |++.+++++ |++|++|+..++....+....... .+.....+++||| ++
T Consensus 19 ~~~~~w~-~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~Sp-dg 73 (740)
T 4a5s_A 19 LYSLRWI-SDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFD---------------------EFGHSINDYSISP-DG 73 (740)
T ss_dssp CCCEEEC-SSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTT---------------------TCCSCCCEEEECT-TS
T ss_pred ccccEEC-CCCcEEEEc--CCcEEEEECCCCceEEEEechhhh---------------------hhcccccceEECC-CC
Confidence 4578999 999888886 999999999888765442211110 1112334689999 67
Q ss_pred CEEEEEECC---------CcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeee
Q psy4571 117 SLFGSVADD---------QKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLH 187 (437)
Q Consensus 117 ~~l~~~~~d---------g~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~ 187 (437)
+.++.++.+ +.+.+||+.+++ ...+..|.+.+...+|||||+. ||.+ .|+.|.+||+.++.....
T Consensus 74 ~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~----~~~l~~~~~~~~~~~~SPdG~~-la~~-~~~~i~~~~~~~~~~~~l 147 (740)
T 4a5s_A 74 QFILLEYNYVKQWRHSYTASYDIYDLNKRQ----LITEERIPNNTQWVTWSPVGHK-LAYV-WNNDIYVKIEPNLPSYRI 147 (740)
T ss_dssp SEEEEEEEEEECSSSCEEEEEEEEETTTTE----ECCSSCCCTTEEEEEECSSTTC-EEEE-ETTEEEEESSTTSCCEEC
T ss_pred CEEEEEECCeeeEEEccceEEEEEECCCCc----EEEcccCCCcceeeEECCCCCE-EEEE-ECCeEEEEECCCCceEEE
Confidence 888888775 567799998542 3345567788999999999997 7766 478999999988654222
Q ss_pred EeccCCCce-----------------EEEEEcCCCCcEEEEEeCC-C---------------------------------
Q psy4571 188 SFESHKDEI-----------------FQVQWSPHNETILASSGTD-R--------------------------------- 216 (437)
Q Consensus 188 ~~~~h~~~v-----------------~~v~~~p~~~~~l~sg~~d-g--------------------------------- 216 (437)
+..++...+ ..+.|+|||+. |+.++.| +
T Consensus 148 t~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~-la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~ 226 (740)
T 4a5s_A 148 TWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTF-LAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNP 226 (740)
T ss_dssp CSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSE-EEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCC
T ss_pred cCCCCccceecCcccccccchhcCCCcceEECCCCCE-EEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCC
Confidence 233333323 34899999996 6655432 2
Q ss_pred --eEEEEEcCC---CCCCCCCCCCCCCCCceEEEec------CccccEEEEEEccCCCeEEEEEe----CCCeEEEEeCC
Q psy4571 217 --RLHVWDLSK---IGEEQSTEDAEDGPPELLFIHG------GHTAKISDFSWNPNEPWVICSVS----EDNIMQEYCDS 281 (437)
Q Consensus 217 --~i~vwd~~~---~~~~~~~~~~~~~~~~~~~~~~------~h~~~v~~l~~~p~~~~~l~s~~----~dg~i~iwd~~ 281 (437)
.|++||+.+ +... . ...+. +|...+..++|+|||+ +++... .+..|.+||+.
T Consensus 227 ~~~l~v~d~~~~~~~~~~-----------~-~~~l~~~~~~~~~~~~~~~~~wspdg~-~~~~~~~r~~~~~~i~~~d~~ 293 (740)
T 4a5s_A 227 TVKFFVVNTDSLSSVTNA-----------T-SIQITAPASMLIGDHYLCDVTWATQER-ISLQWLRRIQNYSVMDICDYD 293 (740)
T ss_dssp EEEEEEEETTSCCSSSCC-----------C-EEEECCCHHHHTSCEEEEEEEEEETTE-EEEEEEESSTTEEEEEEEEEE
T ss_pred eeEEEEEECCCCCCCCcc-----------e-EEEecCCccCCCCCeEEEEEEEeCCCe-EEEEEeCCCCCEEEEEEEECC
Confidence 355555554 3110 1 11122 3777899999999998 444432 23479999999
Q ss_pred CCC----Cceeeee-eecccCC-----ceeeeecCCCCccc-ccC-CCCcccccccccccccccccchhhhhhh
Q psy4571 282 TDS----DTKTMRL-DSIRSNG-----GISSTASPTASSTA-SES-PTPTNSVHEKNYWQGLVLFDILVCEEQR 343 (437)
Q Consensus 282 ~~~----~~~~~~~-~~~~~~~-----~~~~~~s~~g~~l~-s~s-~d~~~~~~~~~~~~~i~~wd~~~~~~~~ 343 (437)
+++ +...... ...+... ....+|+|||+.++ ..+ .++. ..|.+||..+++...
T Consensus 294 tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~---------~~l~~~~~~~~~~~~ 358 (740)
T 4a5s_A 294 ESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGY---------RHICYFQIDKKDCTF 358 (740)
T ss_dssp TTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSC---------EEEEEEETTCSSCEE
T ss_pred CCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCc---------eEEEEEECCCCceEe
Confidence 987 2222111 0111111 22568999999766 444 3332 337888887665443
No 165
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.69 E-value=2.1e-14 Score=130.14 Aligned_cols=244 Identities=13% Similarity=0.129 Sum_probs=165.5
Q ss_pred ceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeCC
Q psy4571 35 YRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHLL 114 (437)
Q Consensus 35 ~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp~ 114 (437)
..+..++++ +++.++++.+.++.|.+|+..+..+.... ... ........+.++++.+.
T Consensus 30 ~~p~~v~~~-~~g~l~v~~~~~~~i~~~d~~g~~~~~~~--~~~-------------------~~~~~~~~p~~i~~~~~ 87 (286)
T 1q7f_A 30 TEPSGVAVN-AQNDIIVADTNNHRIQIFDKEGRFKFQFG--ECG-------------------KRDSQLLYPNRVAVVRN 87 (286)
T ss_dssp SCEEEEEEC-TTCCEEEEEGGGTEEEEECTTSCEEEEEC--CBS-------------------SSTTCBSSEEEEEEETT
T ss_pred CCCceEEEC-CCCCEEEEECCCCEEEEECCCCcEEEEec--ccC-------------------CCcccccCceEEEEEcC
Confidence 457788888 88888888888999999997644332211 000 00011234678889543
Q ss_pred CCCEEEEEEC-CCcEEEEEcCCCCCCCCeeeec-cCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEec--
Q psy4571 115 HESLFGSVAD-DQKLMIWDTRSHNVSKPSHTVD-AHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFE-- 190 (437)
Q Consensus 115 ~~~~l~~~~~-dg~v~vwd~~~~~~~~~~~~~~-~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~-- 190 (437)
++.++++... ++.|.+||.. .+.+..+. .+...+.+++++|+|. ++++...++.|.+||... +. ...+.
T Consensus 88 ~g~l~v~~~~~~~~i~~~d~~----g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~g-~~-~~~~~~~ 160 (286)
T 1q7f_A 88 SGDIIVTERSPTHQIQIYNQY----GQFVRKFGATILQHPRGVTVDNKGR-IIVVECKVMRVIIFDQNG-NV-LHKFGCS 160 (286)
T ss_dssp TTEEEEEECGGGCEEEEECTT----SCEEEEECTTTCSCEEEEEECTTSC-EEEEETTTTEEEEECTTS-CE-EEEEECT
T ss_pred CCeEEEEcCCCCCEEEEECCC----CcEEEEecCccCCCceEEEEeCCCC-EEEEECCCCEEEEEcCCC-CE-EEEeCCC
Confidence 5666655533 7899999943 34444443 3445789999999997 688878889999999764 33 44442
Q ss_pred cCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEec--CccccEEEEEEccCCCeEEEE
Q psy4571 191 SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHG--GHTAKISDFSWNPNEPWVICS 268 (437)
Q Consensus 191 ~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~--~h~~~v~~l~~~p~~~~~l~s 268 (437)
.+...+..++++|+|+ ++++...++.|++||.... .+..+. ++...+..++++|+|. ++++
T Consensus 161 ~~~~~p~~i~~~~~g~-l~v~~~~~~~i~~~~~~g~---------------~~~~~~~~g~~~~p~~i~~d~~G~-l~v~ 223 (286)
T 1q7f_A 161 KHLEFPNGVVVNDKQE-IFISDNRAHCVKVFNYEGQ---------------YLRQIGGEGITNYPIGVGINSNGE-ILIA 223 (286)
T ss_dssp TTCSSEEEEEECSSSE-EEEEEGGGTEEEEEETTCC---------------EEEEESCTTTSCSEEEEEECTTCC-EEEE
T ss_pred CccCCcEEEEECCCCC-EEEEECCCCEEEEEcCCCC---------------EEEEEccCCccCCCcEEEECCCCC-EEEE
Confidence 3445689999999997 6888788999999997542 122232 2335789999999998 7878
Q ss_pred EeCCC-eEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchh
Q psy4571 269 VSEDN-IMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILV 338 (437)
Q Consensus 269 ~~~dg-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~ 338 (437)
...++ .|.+||.. ++.+..+.... ....+..++++|+|+++++. .++. |++|+...
T Consensus 224 ~~~~~~~i~~~~~~-g~~~~~~~~~~-~~~~~~~i~~~~~g~l~vs~-~~~~-----------v~v~~~~~ 280 (286)
T 1q7f_A 224 DNHNNFNLTIFTQD-GQLISALESKV-KHAQCFDVALMDDGSVVLAS-KDYR-----------LYIYRYVQ 280 (286)
T ss_dssp ECSSSCEEEEECTT-SCEEEEEEESS-CCSCEEEEEEETTTEEEEEE-TTTE-----------EEEEECSC
T ss_pred eCCCCEEEEEECCC-CCEEEEEcccC-CCCcceeEEECCCCcEEEEC-CCCe-----------EEEEEccc
Confidence 87776 99999954 55555554321 12235567999999988774 4666 67776643
No 166
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.68 E-value=4.4e-16 Score=146.68 Aligned_cols=239 Identities=9% Similarity=-0.007 Sum_probs=147.5
Q ss_pred CcceEEeeCCCCCEEEEEECCCcEEEEEcC-CCCCCCCeeee--ccCCCCeEEEEEeCCCCcE-EEEEe-----------
Q psy4571 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTR-SHNVSKPSHTV--DAHTAEVNCLSFNPYSEYI-LATGS----------- 169 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~-~~~~~~~~~~~--~~h~~~v~~l~~~~~~~~~-l~sgs----------- 169 (437)
.+..++|+| ++++|++++.+ .|.+|++. ++ +..... ..+ +.+.+++|+|+|+++ ++++.
T Consensus 41 ~~~~~a~sp-dg~~l~~~~~~-~v~~~~~~~~g---~~~~~~~~~~~-g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~ 114 (365)
T 1jof_A 41 PISWMTFDH-ERKNIYGAAMK-KWSSFAVKSPT---EIVHEASHPIG-GHPRANDADTNTRAIFLLAAKQPPYAVYANPF 114 (365)
T ss_dssp CCSEEEECT-TSSEEEEEEBT-EEEEEEEEETT---EEEEEEEEECC-SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEE
T ss_pred CCcEEEECC-CCCEEEEEccc-eEEEEEECCCC---CEEEeeEeecC-CCCccEEECCCCCEEEEEEecCCcceecccee
Confidence 577899999 67788888877 99999986 32 222211 111 235668999999852 44543
Q ss_pred --CCCeEEEEeCCCCceeeeEec----cCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcC-CCCCCCCCCCCCCCCCce
Q psy4571 170 --ADKTVALWDLRNLKLKLHSFE----SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLS-KIGEEQSTEDAEDGPPEL 242 (437)
Q Consensus 170 --~dg~i~lwd~~~~~~~~~~~~----~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~-~~~~~~~~~~~~~~~~~~ 242 (437)
.+|.+.+|++.........+. .+...+.+++|+|+|++++++...++.|++||+. +++. ..
T Consensus 115 ~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~------------~~ 182 (365)
T 1jof_A 115 YKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEV------------EL 182 (365)
T ss_dssp SSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCE------------EE
T ss_pred ecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCE------------EE
Confidence 689999999974222222222 2456799999999998644444457899999997 4432 11
Q ss_pred EEEec--CccccEEEEEEccCCCeEEEEEeCCCeEEEEeCC--CCCCce---eeeeeecc---cC-------Cceeee-e
Q psy4571 243 LFIHG--GHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDS--TDSDTK---TMRLDSIR---SN-------GGISST-A 304 (437)
Q Consensus 243 ~~~~~--~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~--~~~~~~---~~~~~~~~---~~-------~~~~~~-~ 304 (437)
+.... .|...+..++|+|+|++++++...++.|.+|++. +++... .+...... +. ....++ |
T Consensus 183 ~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~ 262 (365)
T 1jof_A 183 VGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCAL 262 (365)
T ss_dssp EEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEE
T ss_pred eeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEE
Confidence 12222 2456789999999999555555568899999875 454321 12111100 11 255678 9
Q ss_pred cCCCCcccccCCCCcccccccccccccccccch-hhhhhh---hhcCCCccccccCCCC---CCccccc
Q psy4571 305 SPTASSTASESPTPTNSVHEKNYWQGLVLFDIL-VCEEQR---QLLGTEEESSDRHSSD---NDTEDLN 366 (437)
Q Consensus 305 s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~-~~~~~~---~~~~h~~~~~~~~~~~---~~~~~~~ 366 (437)
+|||++|+++..+... .....+.+|++. +|+... .+..+......+.++| +|..++.
T Consensus 263 spdG~~l~v~~~~~~~-----~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v 326 (365)
T 1jof_A 263 TFSGKYMFASSRANKF-----ELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAI 326 (365)
T ss_dssp CTTSSEEEEEEEESST-----TSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEE
T ss_pred CCCCCEEEEECCCCCC-----CCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEE
Confidence 9999988765432210 000017889885 565432 1333444566777888 6765543
No 167
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.68 E-value=1.1e-15 Score=157.49 Aligned_cols=238 Identities=14% Similarity=0.166 Sum_probs=152.2
Q ss_pred CCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCC-----eEEEEEeCCCCcEEEEEeCC-------
Q psy4571 104 LSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAE-----VNCLSFNPYSEYILATGSAD------- 171 (437)
Q Consensus 104 ~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~-----v~~l~~~~~~~~~l~sgs~d------- 171 (437)
.....++|+| ++.+++++ ||.|++||+.+ .+....+.+|... ...++|||||++ |+.++.+
T Consensus 17 ~~~~~~~w~~-dg~~~~~~--~~~i~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~-l~~~~~~~~~~r~~ 89 (740)
T 4a5s_A 17 LKLYSLRWIS-DHEYLYKQ--ENNILVFNAEY---GNSSVFLENSTFDEFGHSINDYSISPDGQF-ILLEYNYVKQWRHS 89 (740)
T ss_dssp CCCCCEEECS-SSEEEEEE--TTEEEEEETTT---CCEEEEECTTTTTTCCSCCCEEEECTTSSE-EEEEEEEEECSSSC
T ss_pred ccccccEECC-CCcEEEEc--CCcEEEEECCC---CceEEEEechhhhhhcccccceEECCCCCE-EEEEECCeeeEEEc
Confidence 3466899999 56777775 99999999984 4445556666532 244889999996 7777765
Q ss_pred --CeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCc
Q psy4571 172 --KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGH 249 (437)
Q Consensus 172 --g~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h 249 (437)
+.+.+||+.+++ ...+..|...+...+|||||+. ||.+. |+.|++||+.++...+.... +... ..+.++
T Consensus 90 ~~~~~~~~d~~~~~--~~~l~~~~~~~~~~~~SPdG~~-la~~~-~~~i~~~~~~~~~~~~lt~~---g~~~--~~~~g~ 160 (740)
T 4a5s_A 90 YTASYDIYDLNKRQ--LITEERIPNNTQWVTWSPVGHK-LAYVW-NNDIYVKIEPNLPSYRITWT---GKED--IIYNGI 160 (740)
T ss_dssp EEEEEEEEETTTTE--ECCSSCCCTTEEEEEECSSTTC-EEEEE-TTEEEEESSTTSCCEECCSC---CBTT--TEEESB
T ss_pred cceEEEEEECCCCc--EEEcccCCCcceeeEECCCCCE-EEEEE-CCeEEEEECCCCceEEEcCC---CCcc--ceecCc
Confidence 567799999865 3456677888999999999996 66664 78999999987654322100 0000 011222
Q ss_pred cc---------cEEEEEEccCCCeEEEEEeCC-C-----------------------------------eEEEEeCCC--
Q psy4571 250 TA---------KISDFSWNPNEPWVICSVSED-N-----------------------------------IMQEYCDST-- 282 (437)
Q Consensus 250 ~~---------~v~~l~~~p~~~~~l~s~~~d-g-----------------------------------~i~iwd~~~-- 282 (437)
.. ....+.|||||+ .|+.++.| + .|++||+.+
T Consensus 161 ~~~v~~ee~~~~~~~~~wSpDg~-~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~ 239 (740)
T 4a5s_A 161 TDWVYEEEVFSAYSALWWSPNGT-FLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLS 239 (740)
T ss_dssp CCHHHHHHTSSSSBCEEECTTSS-EEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCC
T ss_pred ccccccchhcCCCcceEECCCCC-EEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCC
Confidence 21 123589999999 45555322 1 588889888
Q ss_pred -CCCceeeeeee-----cccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhh------hhhhh--cCC
Q psy4571 283 -DSDTKTMRLDS-----IRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCE------EQRQL--LGT 348 (437)
Q Consensus 283 -~~~~~~~~~~~-----~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~------~~~~~--~~h 348 (437)
++......+.. .+......++|||||+.++....... ....|.+||+.+|+ .+..+ .+|
T Consensus 240 ~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~-------~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~ 312 (740)
T 4a5s_A 240 SVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQ-------NYSVMDICDYDESSGRWNCLVARQHIEMST 312 (740)
T ss_dssp SSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESST-------TEEEEEEEEEETTTTEEEECGGGCEEEECS
T ss_pred CCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCC-------CEEEEEEEECCCCccccceeEEEEeeeccC
Confidence 64322222211 12233456699999996654322110 11228999999987 23333 455
Q ss_pred Ccccc-----ccCCCCCCcccc
Q psy4571 349 EEESS-----DRHSSDNDTEDL 365 (437)
Q Consensus 349 ~~~~~-----~~~~~~~~~~~~ 365 (437)
...+. ...|+|||+.++
T Consensus 313 ~~~v~~~~~~~p~fspDG~~l~ 334 (740)
T 4a5s_A 313 TGWVGRFRPSEPHFTLDGNSFY 334 (740)
T ss_dssp SSCSSSSSCCCCEECTTSSEEE
T ss_pred CceEccCcCCCceEcCCCCEEE
Confidence 54443 567899998654
No 168
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.66 E-value=1.8e-14 Score=133.64 Aligned_cols=230 Identities=13% Similarity=0.075 Sum_probs=163.2
Q ss_pred CCcceEEeeCCCCCEEEEEECC------------------------CcEEEEEcCCCCCCCCeeeec-cCCCCeEEEEEe
Q psy4571 104 LSRQDVAWHLLHESLFGSVADD------------------------QKLMIWDTRSHNVSKPSHTVD-AHTAEVNCLSFN 158 (437)
Q Consensus 104 ~~v~~~~~sp~~~~~l~~~~~d------------------------g~v~vwd~~~~~~~~~~~~~~-~h~~~v~~l~~~ 158 (437)
..+.+++++| +++++++...+ +.|.+||..+ .+.+..+. ++...+..++++
T Consensus 24 ~~v~~va~d~-~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~---g~~~~~~~~~~~~~p~gia~d 99 (329)
T 3fvz_A 24 GQVSGVALDS-KNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNN---AEILQSSGKNLFYLPHGLSID 99 (329)
T ss_dssp SCEEEEEECT-TCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTT---CCEEEEECTTTCSSEEEEEEC
T ss_pred CCceEEEECC-CCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCC---CeEEeccCCCccCCceEEEEC
Confidence 4678899999 57777777666 4799999873 44444443 344578999999
Q ss_pred CCCCcEEEEEeCCCeEEEEeCCCCceeeeEe---------ccCCCceEEEEEcC-CCCcEEEEEe-CCCeEEEEEcCCCC
Q psy4571 159 PYSEYILATGSADKTVALWDLRNLKLKLHSF---------ESHKDEIFQVQWSP-HNETILASSG-TDRRLHVWDLSKIG 227 (437)
Q Consensus 159 ~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~---------~~h~~~v~~v~~~p-~~~~~l~sg~-~dg~i~vwd~~~~~ 227 (437)
|+|. ++++...++.|++||.......+..+ ..+......++++| ++. ++++.+ .++.|++||.. +.
T Consensus 100 ~~g~-l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~-lyv~d~~~~~~I~~~~~~-g~ 176 (329)
T 3fvz_A 100 TDGN-YWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGA-VFVSDGYCNSRIVQFSPS-GK 176 (329)
T ss_dssp TTSC-EEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCC-EEEEECSSCCEEEEECTT-SC
T ss_pred CCCC-EEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCe-EEEEeCCCCCeEEEEcCC-CC
Confidence 9999 68888889999999987542234444 23445689999999 665 677776 68999999943 32
Q ss_pred CCCCCCCCCCCCCceEEEec----------CccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccC
Q psy4571 228 EEQSTEDAEDGPPELLFIHG----------GHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSN 297 (437)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~----------~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 297 (437)
. +..+. ++-.....|+++|++..++++...++.|++||..+++.+..+.... ...
T Consensus 177 ~--------------~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~-~~~ 241 (329)
T 3fvz_A 177 F--------------VTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHAS-FGR 241 (329)
T ss_dssp E--------------EEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTT-TTT
T ss_pred E--------------EEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccc-cCC
Confidence 2 22221 2234489999999955488888999999999999887776664322 233
Q ss_pred CceeeeecC------CCCcccccCCCCcccccccccccccccccchhhhhhhhh---cCCCccccccCCCCCCccccc
Q psy4571 298 GGISSTASP------TASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQL---LGTEEESSDRHSSDNDTEDLN 366 (437)
Q Consensus 298 ~~~~~~~s~------~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~---~~h~~~~~~~~~~~~~~~~~~ 366 (437)
....++++| +|...++...+.. +++||..+|+.+..+ .++......++++++|..+..
T Consensus 242 ~~~~~~~~pg~~~~~~g~~~v~~~~~~~-----------v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyva 308 (329)
T 3fvz_A 242 NVFAISYIPGFLFAVNGKPYFGDQEPVQ-----------GFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIG 308 (329)
T ss_dssp CEEEEEEETTEEEEEECCCCTTCSCCCC-----------EEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEE
T ss_pred CcceeeecCCEEEEeCCCEEeccCCCcE-----------EEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEE
Confidence 455667788 5554444444444 889999999888776 466667888899999864443
No 169
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.64 E-value=3.3e-14 Score=133.47 Aligned_cols=271 Identities=8% Similarity=-0.048 Sum_probs=177.8
Q ss_pred ccCceEeeecCCCcee---------EEEecCCCCeEEEec-----------CceEEEEEeeecc---cccc-------CC
Q psy4571 55 INEEYKIWKKNTPFLY---------DLVVNNYVANISCIL-----------NISILFFEIIFTQ---NFPF-------PL 104 (437)
Q Consensus 55 ~d~~v~iw~~~~~~~~---------~~~~~~~~~~i~~~~-----------~~~i~~~~~~~~~---~~~~-------~~ 104 (437)
.|+.+.+||..++.+. .+.++++...+.... ++.|.+||....+ .++. ..
T Consensus 29 ~d~~v~v~D~~t~~~~~~i~~g~~p~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~ 108 (361)
T 2oiz_A 29 TESRVHVYDYTNGKFLGMVPTAFNGHVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLN 108 (361)
T ss_dssp GGCEEEEEETTTCCEEEEEECCEEEEEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCC
T ss_pred ccCeEEEEECCCCeEEEEecCCCCCceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCC
Confidence 4667777775543322 566777777664432 4678999864322 2222 24
Q ss_pred CcceEEeeCCCCCEEEEEEC--CCcEEEEEcCCCCCCCCeee-eccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCC
Q psy4571 105 SRQDVAWHLLHESLFGSVAD--DQKLMIWDTRSHNVSKPSHT-VDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRN 181 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~~--dg~v~vwd~~~~~~~~~~~~-~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~ 181 (437)
....++|+| ++++|+++.. ++.|.+||+. ..+.+.. +. ..+ ...+.+.|++...+++.+.||.+.+|+...
T Consensus 109 ~p~~i~~sp-dg~~l~v~n~~~~~~v~v~d~~---~~~~~~~~i~-~~~-~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~ 182 (361)
T 2oiz_A 109 YDGLFRQTT-DGKFIVLQNASPATSIGIVDVA---KGDYVEDVTA-AAG-CWSVIPQPNRPRSFMTICGDGGLLTINLGE 182 (361)
T ss_dssp CGGGEEECT-TSSEEEEEEESSSEEEEEEETT---TTEEEEEEGG-GTT-EEEEEECTTSSSEEEEEETTSSEEEEEECT
T ss_pred CcceEEECC-CCCEEEEECCCCCCeEEEEECC---CCcEEEEEec-CCC-cceeEEcCCCCeeEEEECCCCcEEEEEECC
Confidence 578899999 5677776653 6899999998 4455555 43 222 233667888755689999999999999875
Q ss_pred Cceeee------EeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEec--C----c
Q psy4571 182 LKLKLH------SFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHG--G----H 249 (437)
Q Consensus 182 ~~~~~~------~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~--~----h 249 (437)
...... .+.....++ .+.++|++.. ++..+.++.|.++|+....... +..+. . +
T Consensus 183 ~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~-~~~~~~~~~v~v~d~~~~~~~~------------~~~~~~~~~~~~~ 248 (361)
T 2oiz_A 183 DGKVASQSRSKQMFSVKDDPI-FIAPALDKDK-AHFVSYYGNVYSADFSGDEVKV------------DGPWSLLNDEDKA 248 (361)
T ss_dssp TSSEEEEEECCCCSCTTTSCB-CSCCEECSSE-EEEEBTTSEEEEEECSSSSCEE------------EEEEESCCHHHHH
T ss_pred CCcEeeeccccceEcCCCCce-EEEecccCCE-EEEEeCCCeEEEEEecCCCcee------------cccccccCccccc
Confidence 332121 122222222 3344677765 5566788999999997543210 01000 0 0
Q ss_pred ----cccEEEEEEccCCCeEEEEEeC----------CCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccC
Q psy4571 250 ----TAKISDFSWNPNEPWVICSVSE----------DNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASES 315 (437)
Q Consensus 250 ----~~~v~~l~~~p~~~~~l~s~~~----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s 315 (437)
......++|+|+++.++++.+. .+.|.+||+.+++.+..+... . +..++++|||++|+++.
T Consensus 249 ~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~----~-p~~ia~spdg~~l~v~n 323 (361)
T 2oiz_A 249 KNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGR----D-ALSMTIDQQRNLMLTLD 323 (361)
T ss_dssp TTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECT----T-CCEEEEETTTTEEEEEC
T ss_pred cccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecC----C-eeEEEECCCCCEEEEeC
Confidence 0111127899998866666541 358999999999887777642 2 77889999999998877
Q ss_pred CCCcccccccccccccccccchhh--hhhhhhcCCCccccccCCCCCCc
Q psy4571 316 PTPTNSVHEKNYWQGLVLFDILVC--EEQRQLLGTEEESSDRHSSDNDT 362 (437)
Q Consensus 316 ~d~~~~~~~~~~~~~i~~wd~~~~--~~~~~~~~h~~~~~~~~~~~~~~ 362 (437)
. +. +.+||..++ +.+..+.++......+.++|+|.
T Consensus 324 ~-~~-----------v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 324 G-GN-----------VNVYDISQPEPKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp S-SC-----------EEEEECSSSSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred C-Ce-----------EEEEECCCCcceeeEEeccCCCCcEEEEecCCCC
Confidence 5 55 899999999 98888766666677888898885
No 170
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.61 E-value=6e-14 Score=130.09 Aligned_cols=262 Identities=8% Similarity=-0.036 Sum_probs=165.0
Q ss_pred eEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeCCCC
Q psy4571 37 FYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHLLHE 116 (437)
Q Consensus 37 v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp~~~ 116 (437)
|.+++|+ +....++..+.++.++.|.. ....... .....+.+++|+| ++
T Consensus 8 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~~--------------------------~~~~~~~~~~~~~-~g 56 (333)
T 2dg1_A 8 LPTLFYS-GKSNSAVPIISESELQTITA---EPWLEIS--------------------------KKGLQLEGLNFDR-QG 56 (333)
T ss_dssp CCBCCSC-GGGGCSSCCCCGGGSCEEEC---EEEEEEE--------------------------SSCCCEEEEEECT-TS
T ss_pred cceeeec-CCccceeEEeecccCccccc---ceeEEEe--------------------------ccCccccCcEECC-CC
Confidence 4556677 66666766677777887732 1111100 0112456899998 56
Q ss_pred CEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCC----CeEEEEeCCCCceeeeEec--
Q psy4571 117 SLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSAD----KTVALWDLRNLKLKLHSFE-- 190 (437)
Q Consensus 117 ~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~d----g~i~lwd~~~~~~~~~~~~-- 190 (437)
.+++++..++.|.+||..+ .+.......+...+.+++++|+|. ++++...+ +.|.+||.++... ...+.
T Consensus 57 ~l~~~~~~~~~i~~~d~~~---~~~~~~~~~~~~~~~~i~~~~dg~-l~v~~~~~~~~~~~i~~~d~~~~~~-~~~~~~~ 131 (333)
T 2dg1_A 57 QLFLLDVFEGNIFKINPET---KEIKRPFVSHKANPAAIKIHKDGR-LFVCYLGDFKSTGGIFAATENGDNL-QDIIEDL 131 (333)
T ss_dssp CEEEEETTTCEEEEECTTT---CCEEEEEECSSSSEEEEEECTTSC-EEEEECTTSSSCCEEEEECTTSCSC-EEEECSS
T ss_pred CEEEEECCCCEEEEEeCCC---CcEEEEeeCCCCCcceEEECCCCc-EEEEeCCCCCCCceEEEEeCCCCEE-EEEEccC
Confidence 7877888899999999873 333333334567899999999997 57766666 6899999987553 21222
Q ss_pred cCCCceEEEEEcCCCCcEEEEEeC------CCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCe
Q psy4571 191 SHKDEIFQVQWSPHNETILASSGT------DRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 264 (437)
Q Consensus 191 ~h~~~v~~v~~~p~~~~~l~sg~~------dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~ 264 (437)
.+...+.+++++|+|+ ++++... .+.|..+|..+... ..+..+...+..++|+|+++.
T Consensus 132 ~~~~~~~~i~~d~~g~-l~v~~~~~~~~~~~~~l~~~~~~~~~~---------------~~~~~~~~~~~~i~~~~dg~~ 195 (333)
T 2dg1_A 132 STAYCIDDMVFDSKGG-FYFTDFRGYSTNPLGGVYYVSPDFRTV---------------TPIIQNISVANGIALSTDEKV 195 (333)
T ss_dssp SSCCCEEEEEECTTSC-EEEEECCCBTTBCCEEEEEECTTSCCE---------------EEEEEEESSEEEEEECTTSSE
T ss_pred ccCCcccceEECCCCC-EEEEeccccccCCCceEEEEeCCCCEE---------------EEeecCCCcccceEECCCCCE
Confidence 2445789999999997 5665543 24565665543221 111222345788999999986
Q ss_pred EEEEEeCCCeEEEEeCCC-CCCceeee----eeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhh
Q psy4571 265 VICSVSEDNIMQEYCDST-DSDTKTMR----LDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVC 339 (437)
Q Consensus 265 ~l~s~~~dg~i~iwd~~~-~~~~~~~~----~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~ 339 (437)
++++.+.++.|.+||+.+ +.....+. ........+..++++++|.++++...++. |.+||. .+
T Consensus 196 l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~-----------v~~~d~-~g 263 (333)
T 2dg1_A 196 LWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGR-----------VLVFNK-RG 263 (333)
T ss_dssp EEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTE-----------EEEECT-TS
T ss_pred EEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCCE-----------EEEECC-CC
Confidence 666777789999999974 33332221 00001123455788999998877765555 677776 45
Q ss_pred hhhhhhcCCC------ccccccCCCCCCc
Q psy4571 340 EEQRQLLGTE------EESSDRHSSDNDT 362 (437)
Q Consensus 340 ~~~~~~~~h~------~~~~~~~~~~~~~ 362 (437)
+.+..+..+. ..+..+.+++++.
T Consensus 264 ~~~~~~~~~~~~~g~~~~~~~~~~~~dg~ 292 (333)
T 2dg1_A 264 YPIGQILIPGRDEGHMLRSTHPQFIPGTN 292 (333)
T ss_dssp CEEEEEECTTGGGTCSCBCCEEEECTTSC
T ss_pred CEEEEEEcCCCccccccCcceEEECCCCC
Confidence 5555543332 2466777777764
No 171
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.59 E-value=6.6e-14 Score=142.41 Aligned_cols=230 Identities=9% Similarity=-0.061 Sum_probs=145.9
Q ss_pred ceeEEEEeeCCCcceEEEe--eccCceEeeec-CCC----------cee---------EEEec--CCCCe-EEEecCc--
Q psy4571 35 YRFYRLCVAEPFDDAVEER--VINEEYKIWKK-NTP----------FLY---------DLVVN--NYVAN-ISCILNI-- 87 (437)
Q Consensus 35 ~~v~~~~~~~~~~~~l~tg--s~d~~v~iw~~-~~~----------~~~---------~~~~~--~~~~~-i~~~~~~-- 87 (437)
..+..++|+ ++.-.+++. +.++..+||.. .++ .+. ...+. |++.. +....+.
T Consensus 24 ~~~~~~~~s-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~ 102 (662)
T 3azo_A 24 GRPACVGAV-GDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQ 102 (662)
T ss_dssp SCCEEEEEE-TTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTC
T ss_pred CccceeEEc-CCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEEECCCC
Confidence 356677888 666666666 44677888872 111 112 23343 67777 7666554
Q ss_pred eEEEEEee--e-ccccc--------cCCCcceEEeeCCCCCEEEEEECC----------CcEEEEEcCCCC--CCCCeee
Q psy4571 88 SILFFEII--F-TQNFP--------FPLSRQDVAWHLLHESLFGSVADD----------QKLMIWDTRSHN--VSKPSHT 144 (437)
Q Consensus 88 ~i~~~~~~--~-~~~~~--------~~~~v~~~~~sp~~~~~l~~~~~d----------g~v~vwd~~~~~--~~~~~~~ 144 (437)
.|.+++.. . +.... +...+.+++|+| +++.|+.++.+ ..|++||+.+.. .......
T Consensus 103 ~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~sp-Dg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 181 (662)
T 3azo_A 103 RLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLP-ERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRE 181 (662)
T ss_dssp CEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEET-TTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEE
T ss_pred eEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECC-CCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeE
Confidence 44444543 1 22111 123567899999 67778777766 589999998410 0012334
Q ss_pred ec-cCCCCeEEEEEeCCCCcEEEEEeCC--------CeEEEEeCC-CCc--eeeeEeccCCCceEEEEEcCCCCcEEEEE
Q psy4571 145 VD-AHTAEVNCLSFNPYSEYILATGSAD--------KTVALWDLR-NLK--LKLHSFESHKDEIFQVQWSPHNETILASS 212 (437)
Q Consensus 145 ~~-~h~~~v~~l~~~~~~~~~l~sgs~d--------g~i~lwd~~-~~~--~~~~~~~~h~~~v~~v~~~p~~~~~l~sg 212 (437)
+. .+...+..++|+|||++ |+.++.+ ..|.+||+. ++. ........|...+..++|+|+|+ +++++
T Consensus 182 l~~~~~~~~~~~~~SpDG~~-la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~-l~~~~ 259 (662)
T 3azo_A 182 LSDDAHRFVTGPRLSPDGRQ-AVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGS-LIVAT 259 (662)
T ss_dssp SSCSCSSEECCCEECTTSSE-EEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSC-EEEEE
T ss_pred EEecCCCcccCceECCCCCE-EEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCe-EEEEE
Confidence 44 55567888999999996 6666544 479999998 441 32333445578899999999999 78888
Q ss_pred eCCC--eEEEEEcCCCCCCCCCCCCCCCCCceEEEecCcccc--------EEEEEEccCCCeEEEEEeCCCeEEEE--eC
Q psy4571 213 GTDR--RLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAK--------ISDFSWNPNEPWVICSVSEDNIMQEY--CD 280 (437)
Q Consensus 213 ~~dg--~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~--------v~~l~~~p~~~~~l~s~~~dg~i~iw--d~ 280 (437)
+.++ .|.+||+.+++.... ...+... +..++|+|++. ++++++. +.+++| |+
T Consensus 260 ~~~~~~~l~~~~~~~~~~~~l--------------~~~~~~~~~p~w~~~~~~~~~~~~~~-~~~~~~~-~~~~l~~~d~ 323 (662)
T 3azo_A 260 DRTGWWNLHRVDPATGAATQL--------------CRREEEFAGPLWTPGMRWFAPLANGL-IAVVHGK-GAAVLGILDP 323 (662)
T ss_dssp CTTSSCEEEEECTTTCCEEES--------------SCCSSBSSCCCCSTTCCSEEECTTSC-EEEEEBS-SSCEEEEEET
T ss_pred CCCCCeEEEEEECCCCceeec--------------ccccccccCccccccCceEeEeCCCE-EEEEEEc-CccEEEEEEC
Confidence 8888 566666644432111 1111111 45688999998 7888888 999999 55
Q ss_pred CCCC
Q psy4571 281 STDS 284 (437)
Q Consensus 281 ~~~~ 284 (437)
.+++
T Consensus 324 ~~~~ 327 (662)
T 3azo_A 324 ESGE 327 (662)
T ss_dssp TTTE
T ss_pred CCCc
Confidence 5543
No 172
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.57 E-value=6.8e-13 Score=136.08 Aligned_cols=231 Identities=10% Similarity=-0.023 Sum_probs=144.4
Q ss_pred eeEEEEeeCCCcceEEEeeccC-----ceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEE
Q psy4571 36 RFYRLCVAEPFDDAVEERVINE-----EYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVA 110 (437)
Q Consensus 36 ~v~~~~~~~~~~~~l~tgs~d~-----~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~ 110 (437)
.+..++|+ |++++|+.++.++ .|++|+..++....... ....+..++
T Consensus 126 ~~~~~~~S-PDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~---------------------------~~~~~~~~~ 177 (710)
T 2xdw_A 126 ALRGYAFS-EDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVL---------------------------ERVKFSCMA 177 (710)
T ss_dssp EEEEEEEC-TTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEE---------------------------EEECSCCEE
T ss_pred EEEEEEEC-CCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccc---------------------------cCcccceEE
Confidence 45566666 7777666554433 56666666555433211 011256899
Q ss_pred eeCCCCCEEEEEECCCc----------------EEEEEcCCCCCC-CCeeeeccCCCCeEEEEEeCCCCcEEEEEeC---
Q psy4571 111 WHLLHESLFGSVADDQK----------------LMIWDTRSHNVS-KPSHTVDAHTAEVNCLSFNPYSEYILATGSA--- 170 (437)
Q Consensus 111 ~sp~~~~~l~~~~~dg~----------------v~vwd~~~~~~~-~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~--- 170 (437)
|+| +++.|+.++.++. |++|++.++... ..+.....|...+..+.|+|||+++++++..
T Consensus 178 wsp-Dg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~ 256 (710)
T 2xdw_A 178 WTH-DGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCD 256 (710)
T ss_dssp ECT-TSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSS
T ss_pred EEe-CCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCC
Confidence 999 5777777777765 999999754211 1222223355668899999999974444432
Q ss_pred -CCeEEEEeCCC------CceeeeEeccCCCceEEEEEcCCCCcEEEEEeCC---CeEEEEEcCCCCCCCCCCCCCCCCC
Q psy4571 171 -DKTVALWDLRN------LKLKLHSFESHKDEIFQVQWSPHNETILASSGTD---RRLHVWDLSKIGEEQSTEDAEDGPP 240 (437)
Q Consensus 171 -dg~i~lwd~~~------~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~d---g~i~vwd~~~~~~~~~~~~~~~~~~ 240 (437)
+..|.+||+.+ +......+..+...+.. .|+|+|+.+++.+..+ +.|.+||+.+....
T Consensus 257 ~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~----------- 324 (710)
T 2xdw_A 257 PVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEES----------- 324 (710)
T ss_dssp SCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGG-----------
T ss_pred CccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcc-----------
Confidence 56899999986 43235556666666655 4889998755555443 36999998775311
Q ss_pred ceEEEecCccc--cEEEEEEccCCCeEEEEEeCCCe--EEEEeCCCCCCceeeeeeecccCCceeeeecCCCCccc
Q psy4571 241 ELLFIHGGHTA--KISDFSWNPNEPWVICSVSEDNI--MQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTA 312 (437)
Q Consensus 241 ~~~~~~~~h~~--~v~~l~~~p~~~~~l~s~~~dg~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~ 312 (437)
....+..|.. .+..++|++++. ++++...|+. |.+||+.+++....+.. +...+..++++|++..++
T Consensus 325 -~~~~l~~~~~~~~~~~~~~~~~~~-lv~~~~~~g~~~l~~~~~~~g~~~~~l~~---~~~~v~~~~~s~d~~~l~ 395 (710)
T 2xdw_A 325 -KWKVLVPEHEKDVLEWVACVRSNF-LVLCYLHDVKNTLQLHDLATGALLKIFPL---EVGSVVGYSGQKKDTEIF 395 (710)
T ss_dssp -GCEEEECCCSSCEEEEEEEETTTE-EEEEEEETTEEEEEEEETTTCCEEEEECC---CSSEEEEEECCTTCSEEE
T ss_pred -cceeccCCCCCCeEEEEEEEcCCE-EEEEEEECCEEEEEEEECCCCCEEEecCC---CCceEEEEecCCCCCEEE
Confidence 0112333333 688899986665 8888888885 56677767765555543 233344567888887655
No 173
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.57 E-value=1.7e-14 Score=136.90 Aligned_cols=228 Identities=11% Similarity=0.055 Sum_probs=139.3
Q ss_pred eEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEE-------------------EEEeCCCCcEEEEE
Q psy4571 108 DVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNC-------------------LSFNPYSEYILATG 168 (437)
Q Consensus 108 ~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~-------------------l~~~~~~~~~l~sg 168 (437)
.+.|+| +++.|+.++.++.|++||+.+ .+.......+...... +.|+|+++. ++.+
T Consensus 85 ~~~~sp-dg~~l~~~~~~~~l~~~d~~~---~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~-~~~~ 159 (396)
T 3c5m_A 85 GGFIST-DERAFFYVKNELNLMKVDLET---LEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSW-EKFA 159 (396)
T ss_dssp TCEECT-TSSEEEEEETTTEEEEEETTT---CCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSH-HHHH
T ss_pred cceECC-CCCEEEEEEcCCcEEEEECCC---CCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcc-eeee
Confidence 478999 678888888899999999984 3333333333332222 356777775 4433
Q ss_pred -----eCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcC-CCCcEEEEEeCC------CeEEEEEcCCCCCCCCCCCCC
Q psy4571 169 -----SADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSP-HNETILASSGTD------RRLHVWDLSKIGEEQSTEDAE 236 (437)
Q Consensus 169 -----s~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p-~~~~~l~sg~~d------g~i~vwd~~~~~~~~~~~~~~ 236 (437)
..+..|.+||+.+++. ..+..+...+..+.|+| +++. ++..+.+ ..|.+||+.......
T Consensus 160 ~~~~~~~~~~l~~~d~~~g~~--~~~~~~~~~~~~~~~sp~dg~~-l~~~~~~~~~~~~~~l~~~d~~~~~~~~------ 230 (396)
T 3c5m_A 160 EFYHTNPTCRLIKVDIETGEL--EVIHQDTAWLGHPIYRPFDDST-VGFCHEGPHDLVDARMWLVNEDGSNVRK------ 230 (396)
T ss_dssp HHHHTCCCEEEEEEETTTCCE--EEEEEESSCEEEEEEETTEEEE-EEEEECSCSSSCSCCCEEEETTSCCCEE------
T ss_pred eeccCCCcceEEEEECCCCcE--EeeccCCcccccceECCCCCCE-EEEEecCCCCCCCceEEEEECCCCceeE------
Confidence 4677899999988653 23335677899999999 7775 4444333 368888886543211
Q ss_pred CCCCceEEEecCc--cccEEEEEEccCCCeEEEEEeCC----CeEEEEeCCCCCCceeeeeeecccCCceeeeecC-CCC
Q psy4571 237 DGPPELLFIHGGH--TAKISDFSWNPNEPWVICSVSED----NIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASP-TAS 309 (437)
Q Consensus 237 ~~~~~~~~~~~~h--~~~v~~l~~~p~~~~~l~s~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~-~g~ 309 (437)
+..+ ...+..++|+|+|+.+++.+..+ +.|++||+.+++....... .+. ...|+| ||+
T Consensus 231 ---------l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~-----~~~-~~~~s~~dg~ 295 (396)
T 3c5m_A 231 ---------IKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVM-----PPC-SHLMSNFDGS 295 (396)
T ss_dssp ---------SSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEEC-----CSE-EEEEECSSSS
T ss_pred ---------eeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeC-----CCC-CCCccCCCCc
Confidence 1122 23578899999999555443322 4499999988764332221 111 278999 999
Q ss_pred cccccCCCCcccc-----cccccccccccccchhhhhhhhhcCCCc-----------cccccCCCCCCcccc
Q psy4571 310 STASESPTPTNSV-----HEKNYWQGLVLFDILVCEEQRQLLGTEE-----------ESSDRHSSDNDTEDL 365 (437)
Q Consensus 310 ~l~s~s~d~~~~~-----~~~~~~~~i~~wd~~~~~~~~~~~~h~~-----------~~~~~~~~~~~~~~~ 365 (437)
+++.++.+.-... +.......+.+||+.+++. ..+..+.. ......++|+|..++
T Consensus 296 ~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~ 366 (396)
T 3c5m_A 296 LMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSA-QKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVL 366 (396)
T ss_dssp EEEEEECCC----------CCCCCCEEEEEETTTTBC-CEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEE
T ss_pred eEEEecCCcceeeccccccccCCCCcEEEEecccCce-EEccCCCCccccccccccCCCCCceEccCCCeEE
Confidence 8886543210000 0011112388999988764 44555543 144556788887544
No 174
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.56 E-value=4.5e-12 Score=125.31 Aligned_cols=304 Identities=10% Similarity=0.023 Sum_probs=195.4
Q ss_pred CCcceEEEeeccCceEeeecCCCc----------eeEEEecCCCCeE-EEecCceEEEEEee--ec---cccccCCCcce
Q psy4571 45 PFDDAVEERVINEEYKIWKKNTPF----------LYDLVVNNYVANI-SCILNISILFFEII--FT---QNFPFPLSRQD 108 (437)
Q Consensus 45 ~~~~~l~tgs~d~~v~iw~~~~~~----------~~~~~~~~~~~~i-~~~~~~~i~~~~~~--~~---~~~~~~~~v~~ 108 (437)
+...++++...++.|.++|..++. ...+.+++++..+ ++..++.|.+||+. .. ..++.......
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~P~~ 244 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARS 244 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEE
T ss_pred CCceEEEEeCCCCeEEEEECCCCeEEEEEeCCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCCCce
Confidence 445677778888999999976543 3456677777766 55678899999983 22 23333445678
Q ss_pred EEee----CCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeecc----------CCC-CeEEEEEeCCCCcEEEEEeCCCe
Q psy4571 109 VAWH----LLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDA----------HTA-EVNCLSFNPYSEYILATGSADKT 173 (437)
Q Consensus 109 ~~~s----p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~----------h~~-~v~~l~~~~~~~~~l~sgs~dg~ 173 (437)
++|+ |++...+++...++.|.|+|.. +.+.+..+.. |.. .+..+..++++...+++...+|.
T Consensus 245 ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~---t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~ 321 (567)
T 1qks_A 245 IETSKMEGWEDKYAIAGAYWPPQYVIMDGE---TLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGK 321 (567)
T ss_dssp EEECCSTTCTTTEEEEEEEETTEEEEEETT---TCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTE
T ss_pred eEEccccCCCCCEEEEEEccCCeEEEEECC---CCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCe
Confidence 9999 6544445555567999999987 4555554431 222 68889999988876777777899
Q ss_pred EEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEE--ecCccc
Q psy4571 174 VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFI--HGGHTA 251 (437)
Q Consensus 174 i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~--~~~h~~ 251 (437)
|.++|..+.+...............+.|+|+++++++++..++.|.++|+.+++.... +.. ...|.+
T Consensus 322 v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~-----------i~vgg~~Phpg 390 (567)
T 1qks_A 322 ILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAI-----------EDTGGQTPHPG 390 (567)
T ss_dssp EEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEE-----------EECSSSSBCCT
T ss_pred EEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEE-----------EeccCcCCCCc
Confidence 9999998754322222233456778999999998777777789999999998643222 111 123432
Q ss_pred cEEEEEEccCCCeEEEEEe-CCCeEEEEeCCC-------CCCceeeeeeecccCCceeeeecCCCCcccccCCCCccccc
Q psy4571 252 KISDFSWNPNEPWVICSVS-EDNIMQEYCDST-------DSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVH 323 (437)
Q Consensus 252 ~v~~l~~~p~~~~~l~s~~-~dg~i~iwd~~~-------~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~ 323 (437)
.-..+ ++|++..+.+++. .++.|.++|..+ .+.++.+.. ...+...+..+|+++++.....-+-
T Consensus 391 ~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~---~g~g~~~i~~~p~~~~l~v~~~~~~---- 462 (567)
T 1qks_A 391 RGANF-VHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPA---LGGGSLFIKTHPNSQYLYVDATLNP---- 462 (567)
T ss_dssp TCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEEC---SCSCCCCEECCTTCSEEEEECTTCS----
T ss_pred cceee-ECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEec---CCCCCEEEEeCCCCCeEEEecCCCC----
Confidence 21122 5887554666664 568999999987 334444443 2244466778999998777552110
Q ss_pred ccccccccccccchhh-----h----hhh-----hhcCCCccccccCCCCCCccccccccc
Q psy4571 324 EKNYWQGLVLFDILVC-----E----EQR-----QLLGTEEESSDRHSSDNDTEDLNSIWS 370 (437)
Q Consensus 324 ~~~~~~~i~~wd~~~~-----~----~~~-----~~~~h~~~~~~~~~~~~~~~~~~~~w~ 370 (437)
+......|.++|+.+. . .+. .+......+....++++|.++..++|.
T Consensus 463 ~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~ 523 (567)
T 1qks_A 463 EAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWN 523 (567)
T ss_dssp SHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEEC
T ss_pred CcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeeeECCCCCEEEEEeec
Confidence 0000112677777766 1 111 111123457778899999988888885
No 175
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.54 E-value=1.2e-12 Score=117.22 Aligned_cols=241 Identities=7% Similarity=-0.017 Sum_probs=159.1
Q ss_pred eeEEEEeeCCCcceEE-EeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeCC
Q psy4571 36 RFYRLCVAEPFDDAVE-ERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHLL 114 (437)
Q Consensus 36 ~v~~~~~~~~~~~~l~-tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp~ 114 (437)
....++++ +++.+++ +...++.|..|+..+...... . ......+.++++++
T Consensus 25 ~p~~i~~~-~~g~l~v~~~~~~~~i~~~~~~~~~~~~~---~-----------------------~~~~~~p~~i~~~~- 76 (270)
T 1rwi_B 25 SPSGVAVD-SAGNVYVTSEGMYGRVVKLATGSTGTTVL---P-----------------------FNGLYQPQGLAVDG- 76 (270)
T ss_dssp CEEEEEEC-TTCCEEEEECSSSCEEEEECC-----EEC---C-----------------------CCSCCSCCCEEECT-
T ss_pred CccceEEC-CCCCEEEEccCCCCcEEEecCCCcccceE---e-----------------------eCCcCCcceeEECC-
Confidence 66778888 8888777 546777888887544322110 0 00113467899999
Q ss_pred CCCEEEEEECCCcEEEEEcCCCCCCCCeeeec-cCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCC
Q psy4571 115 HESLFGSVADDQKLMIWDTRSHNVSKPSHTVD-AHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHK 193 (437)
Q Consensus 115 ~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~-~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~ 193 (437)
++.++++.. ++.|.+||.... . ...+. .....+.+++++++|. ++++...++.|.+|+..+... ........
T Consensus 77 ~g~l~v~~~-~~~i~~~d~~~~---~-~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~~~~i~~~~~~~~~~-~~~~~~~~ 149 (270)
T 1rwi_B 77 AGTVYVTDF-NNRVVTLAAGSN---N-QTVLPFDGLNYPEGLAVDTQGA-VYVADRGNNRVVKLAAGSKTQ-TVLPFTGL 149 (270)
T ss_dssp TCCEEEEET-TTEEEEECTTCS---C-CEECCCCSCSSEEEEEECTTCC-EEEEEGGGTEEEEECTTCCSC-EECCCCSC
T ss_pred CCCEEEEcC-CCEEEEEeCCCc---e-EeeeecCCcCCCcceEECCCCC-EEEEECCCCEEEEEECCCcee-EeeccccC
Confidence 566665555 889999998732 2 22222 2235789999999987 677777789999998765433 21122233
Q ss_pred CceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCC
Q psy4571 194 DEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273 (437)
Q Consensus 194 ~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg 273 (437)
..+..++++|+|+ ++++...++.|.+||........ ....+...+.++++.++|. ++++...++
T Consensus 150 ~~p~~i~~~~~g~-l~v~~~~~~~i~~~~~~~~~~~~--------------~~~~~~~~p~~i~~d~~g~-l~v~~~~~~ 213 (270)
T 1rwi_B 150 NDPDGVAVDNSGN-VYVTDTDNNRVVKLEAESNNQVV--------------LPFTDITAPWGIAVDEAGT-VYVTEHNTN 213 (270)
T ss_dssp CSCCCEEECTTCC-EEEEEGGGTEEEEECTTTCCEEE--------------CCCSSCCSEEEEEECTTCC-EEEEETTTS
T ss_pred CCceeEEEeCCCC-EEEEECCCCEEEEEecCCCceEe--------------ecccCCCCceEEEECCCCC-EEEEECCCC
Confidence 4678899999997 67777778899999987643211 1122235688999999996 787887889
Q ss_pred eEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhh
Q psy4571 274 IMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEE 341 (437)
Q Consensus 274 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~ 341 (437)
.|.+||........ .. ......+..++++++|+++++...++. |++++....+.
T Consensus 214 ~v~~~~~~~~~~~~-~~--~~~~~~p~~i~~~~~g~l~v~~~~~~~-----------v~~~~~~~~~~ 267 (270)
T 1rwi_B 214 QVVKLLAGSTTSTV-LP--FTGLNTPLAVAVDSDRTVYVADRGNDR-----------VVKLTSLEHHH 267 (270)
T ss_dssp CEEEECTTCSCCEE-CC--CCSCSCEEEEEECTTCCEEEEEGGGTE-----------EEEECCCGGGS
T ss_pred cEEEEcCCCCccee-ec--cCCCCCceeEEECCCCCEEEEECCCCE-----------EEEEcCCCccc
Confidence 99999987653322 11 111234667789999998888877777 66776655543
No 176
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.54 E-value=9.1e-12 Score=115.27 Aligned_cols=239 Identities=9% Similarity=0.026 Sum_probs=150.8
Q ss_pred eeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeCCC
Q psy4571 36 RFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHLLH 115 (437)
Q Consensus 36 ~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp~~ 115 (437)
.+..++|+ +++++++++..++.|.+|+..++.+..... .....+.+++|+| +
T Consensus 46 ~~~~~~~~-~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~--------------------------~~~~~~~~i~~~~-d 97 (333)
T 2dg1_A 46 QLEGLNFD-RQGQLFLLDVFEGNIFKINPETKEIKRPFV--------------------------SHKANPAAIKIHK-D 97 (333)
T ss_dssp CEEEEEEC-TTSCEEEEETTTCEEEEECTTTCCEEEEEE--------------------------CSSSSEEEEEECT-T
T ss_pred cccCcEEC-CCCCEEEEECCCCEEEEEeCCCCcEEEEee--------------------------CCCCCcceEEECC-C
Confidence 34667777 777777777777778888776655433211 1124577899999 5
Q ss_pred CCEEEEEECC----CcEEEEEcCCCCCCCCeeeec--cCCCCeEEEEEeCCCCcEEEEEeC------CCeEEEEeCCCCc
Q psy4571 116 ESLFGSVADD----QKLMIWDTRSHNVSKPSHTVD--AHTAEVNCLSFNPYSEYILATGSA------DKTVALWDLRNLK 183 (437)
Q Consensus 116 ~~~l~~~~~d----g~v~vwd~~~~~~~~~~~~~~--~h~~~v~~l~~~~~~~~~l~sgs~------dg~i~lwd~~~~~ 183 (437)
+.++++...+ +.|.+||..+. .....+. .+...+.+++++|+|. ++++... .+.|..+|.++++
T Consensus 98 g~l~v~~~~~~~~~~~i~~~d~~~~---~~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~~~~~~~l~~~~~~~~~ 173 (333)
T 2dg1_A 98 GRLFVCYLGDFKSTGGIFAATENGD---NLQDIIEDLSTAYCIDDMVFDSKGG-FYFTDFRGYSTNPLGGVYYVSPDFRT 173 (333)
T ss_dssp SCEEEEECTTSSSCCEEEEECTTSC---SCEEEECSSSSCCCEEEEEECTTSC-EEEEECCCBTTBCCEEEEEECTTSCC
T ss_pred CcEEEEeCCCCCCCceEEEEeCCCC---EEEEEEccCccCCcccceEECCCCC-EEEEeccccccCCCceEEEEeCCCCE
Confidence 6777766665 68999998743 2221221 3445799999999997 4665543 3566667766533
Q ss_pred eeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCC-CCCCCCCCCCCCCCceEEEecCccccEEEEEEccCC
Q psy4571 184 LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI-GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNE 262 (437)
Q Consensus 184 ~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~ 262 (437)
...+......+..++|+|+++.++++.+.++.|.+||+... ....... ......+.++ ..+..++++++|
T Consensus 174 --~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~------~~~~~~~~~~-~~~~~i~~d~~G 244 (333)
T 2dg1_A 174 --VTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFG------ATIPYYFTGH-EGPDSCCIDSDD 244 (333)
T ss_dssp --EEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEE------EEEEEECCSS-SEEEEEEEBTTC
T ss_pred --EEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCccccc------ceEEEecCCC-CCCCceEECCCC
Confidence 22332334557899999999865666667889999999642 1111000 0011112232 467889999999
Q ss_pred CeEEEEEeCCCeEEEEeCCCCCCceeeeeeec---ccCCceeeeecCCCCcccccCCC
Q psy4571 263 PWVICSVSEDNIMQEYCDSTDSDTKTMRLDSI---RSNGGISSTASPTASSTASESPT 317 (437)
Q Consensus 263 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~---~~~~~~~~~~s~~g~~l~s~s~d 317 (437)
. ++++...++.|.+||.+ ++....+..... +...+..++|+||+..|..++.+
T Consensus 245 ~-l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 245 N-LYVAMYGQGRVLVFNKR-GYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp C-EEEEEETTTEEEEECTT-SCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred C-EEEEEcCCCEEEEECCC-CCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCc
Confidence 8 77777788999999984 555555543211 00145677889998766655444
No 177
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.53 E-value=2.9e-12 Score=120.19 Aligned_cols=244 Identities=9% Similarity=0.008 Sum_probs=161.2
Q ss_pred EEEeeCCCcceEEEee----------ccCceEeeecCCCce-----------------eEEEecCCCCeEEEe--c-Cce
Q psy4571 39 RLCVAEPFDDAVEERV----------INEEYKIWKKNTPFL-----------------YDLVVNNYVANISCI--L-NIS 88 (437)
Q Consensus 39 ~~~~~~~~~~~l~tgs----------~d~~v~iw~~~~~~~-----------------~~~~~~~~~~~i~~~--~-~~~ 88 (437)
.++|+ |+++.++.+. .+++|.+||..+..+ ..+.+++++..+.+. . +++
T Consensus 54 ~i~~s-pdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~ 132 (361)
T 2oiz_A 54 HVQVS-NDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATS 132 (361)
T ss_dssp EEEEC-TTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEE
T ss_pred ceEEC-CCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCe
Confidence 78999 9999998876 367899999665433 245667777777443 2 578
Q ss_pred EEEEEeeecccc----ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCe------eeeccCCCCeEEEEEe
Q psy4571 89 ILFFEIIFTQNF----PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPS------HTVDAHTAEVNCLSFN 158 (437)
Q Consensus 89 i~~~~~~~~~~~----~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~------~~~~~h~~~v~~l~~~ 158 (437)
|.+||....+.. +.. ....+.+.|.+...+++.+.||.+.+++.... .+.. ..+..+..++ .+.++
T Consensus 133 v~v~d~~~~~~~~~~i~~~-~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~--g~~~~~~~~~~~~~~~~~~~-~~~~~ 208 (361)
T 2oiz_A 133 IGIVDVAKGDYVEDVTAAA-GCWSVIPQPNRPRSFMTICGDGGLLTINLGED--GKVASQSRSKQMFSVKDDPI-FIAPA 208 (361)
T ss_dssp EEEEETTTTEEEEEEGGGT-TEEEEEECTTSSSEEEEEETTSSEEEEEECTT--SSEEEEEECCCCSCTTTSCB-CSCCE
T ss_pred EEEEECCCCcEEEEEecCC-CcceeEEcCCCCeeEEEECCCCcEEEEEECCC--CcEeeeccccceEcCCCCce-EEEec
Confidence 999997655432 221 12236678866678889999999999998642 2222 1122222222 34456
Q ss_pred CCCCcEEEEEeCCCeEEEEeCCCCceee-eEecc------C----CCceEEEEEcCCCCcEEEEEe----------CCCe
Q psy4571 159 PYSEYILATGSADKTVALWDLRNLKLKL-HSFES------H----KDEIFQVQWSPHNETILASSG----------TDRR 217 (437)
Q Consensus 159 ~~~~~~l~sgs~dg~i~lwd~~~~~~~~-~~~~~------h----~~~v~~v~~~p~~~~~l~sg~----------~dg~ 217 (437)
+++.. ++..+.++.|.++|+......+ ..+.. + ......++|+|+++.++++.. .++.
T Consensus 209 ~~g~~-~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~ 287 (361)
T 2oiz_A 209 LDKDK-AHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAE 287 (361)
T ss_dssp ECSSE-EEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSE
T ss_pred ccCCE-EEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCce
Confidence 77775 6667789999999997643211 11110 0 111223789999887666554 1348
Q ss_pred EEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCC--CCceeeeeeecc
Q psy4571 218 LHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTD--SDTKTMRLDSIR 295 (437)
Q Consensus 218 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~--~~~~~~~~~~~~ 295 (437)
|.+||+.+.+ .+..+..+. +.+++|+|+|+ +|++++. +.|.+||..++ +.+..+.. .
T Consensus 288 v~viD~~t~~--------------~v~~i~~~~--p~~ia~spdg~-~l~v~n~-~~v~v~D~~t~~l~~~~~i~~---~ 346 (361)
T 2oiz_A 288 IWVMDTKTKQ--------------RVARIPGRD--ALSMTIDQQRN-LMLTLDG-GNVNVYDISQPEPKLLRTIEG---A 346 (361)
T ss_dssp EEEEETTTTE--------------EEEEEECTT--CCEEEEETTTT-EEEEECS-SCEEEEECSSSSCEEEEEETT---S
T ss_pred EEEEECCCCc--------------EEEEEecCC--eeEEEECCCCC-EEEEeCC-CeEEEEECCCCcceeeEEecc---C
Confidence 9999998863 344455655 89999999999 5556665 99999999998 66655421 2
Q ss_pred cCCceeeeecCCCC
Q psy4571 296 SNGGISSTASPTAS 309 (437)
Q Consensus 296 ~~~~~~~~~s~~g~ 309 (437)
...+..++++|+|.
T Consensus 347 G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 347 AEASLQVQFHPVGG 360 (361)
T ss_dssp CSSEEEEEECCCSC
T ss_pred CCCcEEEEecCCCC
Confidence 34566789999986
No 178
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.53 E-value=2.2e-13 Score=138.60 Aligned_cols=232 Identities=10% Similarity=-0.065 Sum_probs=147.3
Q ss_pred cCCCcceEEeeCCCCCEEEEE--ECCCcEEEEEcCCCCCCCCeeeeccCCCCeE---------EEEEe--CCCCc-EEEE
Q psy4571 102 FPLSRQDVAWHLLHESLFGSV--ADDQKLMIWDTRSHNVSKPSHTVDAHTAEVN---------CLSFN--PYSEY-ILAT 167 (437)
Q Consensus 102 ~~~~v~~~~~sp~~~~~l~~~--~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~---------~l~~~--~~~~~-~l~s 167 (437)
+...+..++|++ +.-+++.. +.++...||.... ......+..|...+. ...|+ |||+. ++++
T Consensus 22 ~~~~~~~~~~s~-~~~~~~~~~~~~~~~~~l~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~ 97 (662)
T 3azo_A 22 RSGRPACVGAVG-DEVWWVAPRPAEAGRATLVRRRA---DGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFT 97 (662)
T ss_dssp TCSCCEEEEEET-TEEEEEEEETTTTTEEEEEEECT---TSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEE
T ss_pred cCCccceeEEcC-CeEEEEecCcccCCcEEEEEECC---CCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEE
Confidence 456788999998 45555555 4578899999742 234555666665655 56666 99996 4544
Q ss_pred EeCCCeEEEEeCC--C-CceeeeEecc-----CCCceEEEEEcCCCCcEEEEEeCC----------CeEEEEEcCC----
Q psy4571 168 GSADKTVALWDLR--N-LKLKLHSFES-----HKDEIFQVQWSPHNETILASSGTD----------RRLHVWDLSK---- 225 (437)
Q Consensus 168 gs~dg~i~lwd~~--~-~~~~~~~~~~-----h~~~v~~v~~~p~~~~~l~sg~~d----------g~i~vwd~~~---- 225 (437)
...+..|.++++. . +. ...+.. |...+..++|+|||+. |++++.| ..|++||+.+
T Consensus 98 ~~~~~~l~~~~~~~~g~~~--~~~l~~~~~~~~~~~~~~~~~spDg~~-l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 174 (662)
T 3azo_A 98 HFGDQRLYAFEPDAPGGAV--PRPLTPVSAVGGGLRWADPVLLPERGE-VWCMAEEFTGEGPSDVRRFLAAVPLDGSAAA 174 (662)
T ss_dssp BTTTCCEEEECTTSTTCCC--CEECSCCCCSTTCEEEEEEEEETTTTE-EEEEEEEECSSSTTCEEEEEEEEETTSTTTT
T ss_pred ECCCCeEEEEcCCCCCCCC--CEeccCCccCCCCccccCcEECCCCCE-EEEEEecccCCCCCCceeEEEEEECCCCccc
Confidence 4446677777776 2 23 344544 5678899999999996 6666655 5799999987
Q ss_pred --CCCCCCCCCCCCCCCceEEEec-CccccEEEEEEccCCCeEEEEEeCC--------CeEEEEeCC-CCCCceeeeeee
Q psy4571 226 --IGEEQSTEDAEDGPPELLFIHG-GHTAKISDFSWNPNEPWVICSVSED--------NIMQEYCDS-TDSDTKTMRLDS 293 (437)
Q Consensus 226 --~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~l~~~p~~~~~l~s~~~d--------g~i~iwd~~-~~~~~~~~~~~~ 293 (437)
+.. ..+. .+...+..++|+|||+ .|+.++.+ ..|++||+. +++.........
T Consensus 175 ~~~~~---------------~~l~~~~~~~~~~~~~SpDG~-~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~ 238 (662)
T 3azo_A 175 DRSAV---------------RELSDDAHRFVTGPRLSPDGR-QAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLG 238 (662)
T ss_dssp CGGGS---------------EESSCSCSSEECCCEECTTSS-EEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEE
T ss_pred cCCce---------------eEEEecCCCcccCceECCCCC-EEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCC
Confidence 321 1233 4456788899999999 45555533 479999998 452111112222
Q ss_pred cccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCCcc--------ccccCCCCCCcccc
Q psy4571 294 IRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEE--------SSDRHSSDNDTEDL 365 (437)
Q Consensus 294 ~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~--------~~~~~~~~~~~~~~ 365 (437)
.+.......+|+|||+++++++.++... +..||..+++......++.+. +..+.+++++..+.
T Consensus 239 ~~~~~~~~~~~spdg~l~~~~~~~~~~~---------l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~ 309 (662)
T 3azo_A 239 GPEEAIAQAEWAPDGSLIVATDRTGWWN---------LHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAV 309 (662)
T ss_dssp ETTBCEEEEEECTTSCEEEEECTTSSCE---------EEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEE
T ss_pred CCCceEcceEECCCCeEEEEECCCCCeE---------EEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEE
Confidence 2234566779999999888777766421 566777666654433433322 23344556665443
No 179
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.52 E-value=8.8e-13 Score=120.11 Aligned_cols=220 Identities=10% Similarity=0.045 Sum_probs=150.1
Q ss_pred CcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCce
Q psy4571 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKL 184 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~ 184 (437)
...+++|+|++..+++++..++.|..||... . ...+..+...+.+++++|+|. ++++...++.|.+||..+++.
T Consensus 29 ~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~---~--~~~~~~~~~~~~~l~~~~dg~-l~v~~~~~~~i~~~d~~~g~~ 102 (296)
T 3e5z_A 29 WTEGPVYVPARSAVIFSDVRQNRTWAWSDDG---Q--LSPEMHPSHHQNGHCLNKQGH-LIACSHGLRRLERQREPGGEW 102 (296)
T ss_dssp SEEEEEEEGGGTEEEEEEGGGTEEEEEETTS---C--EEEEESSCSSEEEEEECTTCC-EEEEETTTTEEEEECSTTCCE
T ss_pred cccCCeEeCCCCEEEEEeCCCCEEEEEECCC---C--eEEEECCCCCcceeeECCCCc-EEEEecCCCeEEEEcCCCCcE
Confidence 4568999995434888888899999999983 2 556666778899999999998 577776778999999977553
Q ss_pred eeeEeccC----CCceEEEEEcCCCCcEEEEE----e-------------CCCeEEEEEcCCCCCCCCCCCCCCCCCceE
Q psy4571 185 KLHSFESH----KDEIFQVQWSPHNETILASS----G-------------TDRRLHVWDLSKIGEEQSTEDAEDGPPELL 243 (437)
Q Consensus 185 ~~~~~~~h----~~~v~~v~~~p~~~~~l~sg----~-------------~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~ 243 (437)
....... ...+..++++|+|+ ++++. . ..+.|..++.. +. +
T Consensus 103 -~~~~~~~~~~~~~~~~~i~~d~~G~-l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~---------------~ 164 (296)
T 3e5z_A 103 -ESIADSFEGKKLNSPNDVCLAPDGS-LWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT---------------L 164 (296)
T ss_dssp -EEEECEETTEECCCCCCEEECTTSC-EEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC---------------E
T ss_pred -EEEeeccCCCCCCCCCCEEECCCCC-EEEECCccccccccccccccccCCCcEEEEECCC-CC---------------E
Confidence 2221111 23467899999997 57763 2 12345555543 21 1
Q ss_pred EEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCC-CCCC-ceeeeeeecccCCceeeeecCCCCcccccCCCCccc
Q psy4571 244 FIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDS-TDSD-TKTMRLDSIRSNGGISSTASPTASSTASESPTPTNS 321 (437)
Q Consensus 244 ~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~-~~~~-~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~ 321 (437)
.....+......++|+|+++. +++.+.++.|.+|++. +++. ...... ......+..++++++|+++++. ++.
T Consensus 165 ~~~~~~~~~~~gi~~s~dg~~-lv~~~~~~~i~~~~~~~~g~~~~~~~~~-~~~~~~p~~i~~d~~G~l~v~~--~~~-- 238 (296)
T 3e5z_A 165 SAPIRDRVKPNGLAFLPSGNL-LVSDTGDNATHRYCLNARGETEYQGVHF-TVEPGKTDGLRVDAGGLIWASA--GDG-- 238 (296)
T ss_dssp EEEECCCSSEEEEEECTTSCE-EEEETTTTEEEEEEECSSSCEEEEEEEE-CCSSSCCCSEEEBTTSCEEEEE--TTE--
T ss_pred EEeecCCCCCccEEECCCCCE-EEEeCCCCeEEEEEECCCCcCcCCCeEe-eCCCCCCCeEEECCCCCEEEEc--CCe--
Confidence 223345556789999999994 4788889999999997 4433 111111 2233345567899999977776 444
Q ss_pred ccccccccccccccchhhhhhhhhcCCCccccccCC-CCCCcccc
Q psy4571 322 VHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHS-SDNDTEDL 365 (437)
Q Consensus 322 ~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~-~~~~~~~~ 365 (437)
|.+||.. |+.+..+..+.. +..+.+ .+++..+.
T Consensus 239 ---------v~~~~~~-g~~~~~~~~~~~-~~~~~f~~~d~~~L~ 272 (296)
T 3e5z_A 239 ---------VHVLTPD-GDELGRVLTPQT-TSNLCFGGPEGRTLY 272 (296)
T ss_dssp ---------EEEECTT-SCEEEEEECSSC-CCEEEEESTTSCEEE
T ss_pred ---------EEEECCC-CCEEEEEECCCC-ceeEEEECCCCCEEE
Confidence 7888875 777777777766 777777 57775433
No 180
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.52 E-value=1.1e-11 Score=112.12 Aligned_cols=155 Identities=15% Similarity=0.180 Sum_probs=113.1
Q ss_pred CCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeec--cCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCC
Q psy4571 104 LSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVD--AHTAEVNCLSFNPYSEYILATGSADKTVALWDLRN 181 (437)
Q Consensus 104 ~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~--~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~ 181 (437)
..+.+++++| ++.++++...++.|.+||.. .+.+..+. .+...+..++++|+|. ++++...++.|++||...
T Consensus 121 ~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~----g~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~~~~i~~~~~~g 194 (286)
T 1q7f_A 121 QHPRGVTVDN-KGRIIVVECKVMRVIIFDQN----GNVLHKFGCSKHLEFPNGVVVNDKQE-IFISDNRAHCVKVFNYEG 194 (286)
T ss_dssp SCEEEEEECT-TSCEEEEETTTTEEEEECTT----SCEEEEEECTTTCSSEEEEEECSSSE-EEEEEGGGTEEEEEETTC
T ss_pred CCceEEEEeC-CCCEEEEECCCCEEEEEcCC----CCEEEEeCCCCccCCcEEEEECCCCC-EEEEECCCCEEEEEcCCC
Confidence 3567899999 56788777778999999965 33344443 3445789999999988 688878899999999864
Q ss_pred CceeeeEeccC--CCceEEEEEcCCCCcEEEEEeCCC-eEEEEEcCCCCCCCCCCCCCCCCCceEEEecCc--cccEEEE
Q psy4571 182 LKLKLHSFESH--KDEIFQVQWSPHNETILASSGTDR-RLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGH--TAKISDF 256 (437)
Q Consensus 182 ~~~~~~~~~~h--~~~v~~v~~~p~~~~~l~sg~~dg-~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h--~~~v~~l 256 (437)
+. +..+..+ ...+..++++|+|+ ++++...++ .|.+||... + .+..+..+ ...+.++
T Consensus 195 -~~-~~~~~~~g~~~~p~~i~~d~~G~-l~v~~~~~~~~i~~~~~~g-~--------------~~~~~~~~~~~~~~~~i 256 (286)
T 1q7f_A 195 -QY-LRQIGGEGITNYPIGVGINSNGE-ILIADNHNNFNLTIFTQDG-Q--------------LISALESKVKHAQCFDV 256 (286)
T ss_dssp -CE-EEEESCTTTSCSEEEEEECTTCC-EEEEECSSSCEEEEECTTS-C--------------EEEEEEESSCCSCEEEE
T ss_pred -CE-EEEEccCCccCCCcEEEECCCCC-EEEEeCCCCEEEEEECCCC-C--------------EEEEEcccCCCCcceeE
Confidence 33 4455332 35789999999997 677777775 999999643 2 12223222 2347899
Q ss_pred EEccCCCeEEEEEeCCCeEEEEeCCCCC
Q psy4571 257 SWNPNEPWVICSVSEDNIMQEYCDSTDS 284 (437)
Q Consensus 257 ~~~p~~~~~l~s~~~dg~i~iwd~~~~~ 284 (437)
+++|+|+ ++++ +.|+.|++|+.....
T Consensus 257 ~~~~~g~-l~vs-~~~~~v~v~~~~~~~ 282 (286)
T 1q7f_A 257 ALMDDGS-VVLA-SKDYRLYIYRYVQLA 282 (286)
T ss_dssp EEETTTE-EEEE-ETTTEEEEEECSCCC
T ss_pred EECCCCc-EEEE-CCCCeEEEEEccccc
Confidence 9999997 7766 579999999987643
No 181
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.51 E-value=5.4e-12 Score=124.74 Aligned_cols=254 Identities=9% Similarity=-0.002 Sum_probs=169.4
Q ss_pred EEEecCceEEEEEeeecc---ccccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEE
Q psy4571 81 ISCILNISILFFEIIFTQ---NFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSF 157 (437)
Q Consensus 81 i~~~~~~~i~~~~~~~~~---~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~ 157 (437)
++...++.|.++|....+ .++....+..+.|+| +++++++++.|+.|.+||+... ..+.+..+... .....++|
T Consensus 171 V~~~~~~~V~viD~~t~~v~~~i~~g~~p~~v~~Sp-DGr~lyv~~~dg~V~viD~~~~-t~~~v~~i~~G-~~P~~ia~ 247 (567)
T 1qks_A 171 VTLRDAGQIALIDGSTYEIKTVLDTGYAVHISRLSA-SGRYLFVIGRDGKVNMIDLWMK-EPTTVAEIKIG-SEARSIET 247 (567)
T ss_dssp EEETTTTEEEEEETTTCCEEEEEECSSCEEEEEECT-TSCEEEEEETTSEEEEEETTSS-SCCEEEEEECC-SEEEEEEE
T ss_pred EEeCCCCeEEEEECCCCeEEEEEeCCCCccceEECC-CCCEEEEEcCCCeEEEEECCCC-CCcEeEEEecC-CCCceeEE
Confidence 355567899999976543 344556778999999 6788888899999999999511 23555555543 34678999
Q ss_pred e----CCCCcEEEEEeCCCeEEEEeCCCCceeeeEecc----------CCC-ceEEEEEcCCCCcEEEEEeCCCeEEEEE
Q psy4571 158 N----PYSEYILATGSADKTVALWDLRNLKLKLHSFES----------HKD-EIFQVQWSPHNETILASSGTDRRLHVWD 222 (437)
Q Consensus 158 ~----~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~----------h~~-~v~~v~~~p~~~~~l~sg~~dg~i~vwd 222 (437)
+ |+|++++++...+++|.++|..+.+. +..+.. |.. .+..+..+++++.++++...+|.|.++|
T Consensus 248 s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~-~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd 326 (567)
T 1qks_A 248 SKMEGWEDKYAIAGAYWPPQYVIMDGETLEP-KKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVD 326 (567)
T ss_dssp CCSTTCTTTEEEEEEEETTEEEEEETTTCCE-EEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEE
T ss_pred ccccCCCCCEEEEEEccCCeEEEEECCCCcE-EEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEe
Confidence 9 69998667777789999999998664 444321 222 6788999999887777777889999999
Q ss_pred cCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeee-eeccc-CCce
Q psy4571 223 LSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRL-DSIRS-NGGI 300 (437)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-~~~~~-~~~~ 300 (437)
........ +... .......++.|+|+|+++++++..++.|.++|+.+++....+.. ....+ ....
T Consensus 327 ~~~~~~~~------------v~~i-~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~ 393 (567)
T 1qks_A 327 YTDLNNLK------------TTEI-SAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGA 393 (567)
T ss_dssp TTCSSEEE------------EEEE-ECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCE
T ss_pred cCCCccce------------eeee-eccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccce
Confidence 87643111 1111 22335678899999998888887889999999999987766654 32222 1222
Q ss_pred eeeecCCCC-cccccC-CCCcccccccccccccccccchh-------hhhhhhhcCCCccccccCCCCCCcc
Q psy4571 301 SSTASPTAS-STASES-PTPTNSVHEKNYWQGLVLFDILV-------CEEQRQLLGTEEESSDRHSSDNDTE 363 (437)
Q Consensus 301 ~~~~s~~g~-~l~s~s-~d~~~~~~~~~~~~~i~~wd~~~-------~~~~~~~~~h~~~~~~~~~~~~~~~ 363 (437)
. .++|++. .++++. .++. |.++|..+ .+.++++.+.......+..+|++..
T Consensus 394 ~-~~~p~~g~v~~t~~~g~~~-----------Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~ 453 (567)
T 1qks_A 394 N-FVHPTFGPVWATSHMGDDS-----------VALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQY 453 (567)
T ss_dssp E-EEETTTEEEEEEEBSSSSE-----------EEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSE
T ss_pred e-eECCCCCcEEEeCCCCCCe-----------EEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCe
Confidence 2 2578744 444443 4456 55555555 3344555443322334456777653
No 182
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.51 E-value=2.5e-13 Score=128.54 Aligned_cols=229 Identities=10% Similarity=-0.014 Sum_probs=141.5
Q ss_pred cceEEeeCCCCCEEEEEEC-CCc--EEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCC
Q psy4571 106 RQDVAWHLLHESLFGSVAD-DQK--LMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNL 182 (437)
Q Consensus 106 v~~~~~sp~~~~~l~~~~~-dg~--v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~ 182 (437)
+...+|+| +++.|+.++. +|. |.+||+.+ .+......++...+..++|+|+|+. |+.++.++.|.+||+.++
T Consensus 38 ~~~~~~Sp-Dg~~l~~~~~~~g~~~l~~~d~~~---g~~~~lt~~~~~~~~~~~~spdg~~-l~~~~~~~~l~~~d~~~g 112 (388)
T 3pe7_A 38 FYQKCFTR-DGSKLLFGGAFDGPWNYYLLDLNT---QVATQLTEGRGDNTFGGFLSPDDDA-LFYVKDGRNLMRVDLATL 112 (388)
T ss_dssp TTSCCBCT-TSCEEEEEECTTSSCEEEEEETTT---CEEEECCCSSCBCSSSCEECTTSSE-EEEEETTTEEEEEETTTC
T ss_pred hcCccCCC-CCCEEEEEEcCCCCceEEEEeCCC---CceEEeeeCCCCCccceEEcCCCCE-EEEEeCCCeEEEEECCCC
Confidence 34478999 5777777776 674 78888873 3444444555555556789999996 888889999999999986
Q ss_pred ceeeeEeccCCCceEEEE--EcCCCCcEEEEE----------------------eCCCeEEEEEcCCCCCCCCCCCCCCC
Q psy4571 183 KLKLHSFESHKDEIFQVQ--WSPHNETILASS----------------------GTDRRLHVWDLSKIGEEQSTEDAEDG 238 (437)
Q Consensus 183 ~~~~~~~~~h~~~v~~v~--~~p~~~~~l~sg----------------------~~dg~i~vwd~~~~~~~~~~~~~~~~ 238 (437)
+. ......+...+.... ++|++.. ++.. ..+..|.+||+.+++.
T Consensus 113 ~~-~~~~~~~~~~~~~~~~~~~~dg~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~---------- 180 (388)
T 3pe7_A 113 EE-NVVYQVPAEWVGYGTWVANSDCTK-LVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGES---------- 180 (388)
T ss_dssp CE-EEEEECCTTEEEEEEEEECTTSSE-EEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCE----------
T ss_pred cc-eeeeechhhcccccceeECCCCCe-eccccccCcccccccccchhhhhhccCCcceEEEEECCCCce----------
Confidence 65 434444555454443 4899984 5422 2446799999987532
Q ss_pred CCceEEEecCccccEEEEEEcc-CCCeEEEEEeC------CCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcc
Q psy4571 239 PPELLFIHGGHTAKISDFSWNP-NEPWVICSVSE------DNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASST 311 (437)
Q Consensus 239 ~~~~~~~~~~h~~~v~~l~~~p-~~~~~l~s~~~------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l 311 (437)
..+..+...+..++|+| +|+. ++..+. +..|.++|..+++. ..+.... ........+|||||+.|
T Consensus 181 -----~~l~~~~~~~~~~~~sp~dg~~-l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~-~~~~~~~~~~spdg~~l 252 (388)
T 3pe7_A 181 -----TVILQENQWLGHPIYRPYDDST-VAFCHEGPHDLVDARMWLINEDGTNM-RKVKTHA-EGESCTHEFWVPDGSAL 252 (388)
T ss_dssp -----EEEEEESSCEEEEEEETTEEEE-EEEEECSCTTTSSCSEEEEETTSCCC-EESCCCC-TTEEEEEEEECTTSSCE
T ss_pred -----EEeecCCccccccEECCCCCCE-EEEEEecCCCCCcceEEEEeCCCCce-EEeeeCC-CCcccccceECCCCCEE
Confidence 22334556789999999 9984 444443 34788888876543 2222110 00124456899999988
Q ss_pred cccCCCCcccccccccccccccccchhhhhhh--hhcCCCcc---ccccCCCCCCcccc
Q psy4571 312 ASESPTPTNSVHEKNYWQGLVLFDILVCEEQR--QLLGTEEE---SSDRHSSDNDTEDL 365 (437)
Q Consensus 312 ~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~--~~~~h~~~---~~~~~~~~~~~~~~ 365 (437)
+..+.+.. .....+.+||+.+|+... .+.++... .....++|+|..++
T Consensus 253 ~~~~~~~~------~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~ 305 (388)
T 3pe7_A 253 VYVSYLKG------SPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAP 305 (388)
T ss_dssp EEEEEETT------CCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC-
T ss_pred EEEecCCC------CCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcce
Confidence 66443211 000127899999887422 22221110 22235777776554
No 183
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.50 E-value=2.7e-12 Score=116.84 Aligned_cols=228 Identities=10% Similarity=0.023 Sum_probs=151.6
Q ss_pred ceeEEEEeeCCCcc-eEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeC
Q psy4571 35 YRFYRLCVAEPFDD-AVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHL 113 (437)
Q Consensus 35 ~~v~~~~~~~~~~~-~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp 113 (437)
.....++|+ |+++ +++++..++.|..|+..++ ..... . ....+.+++++|
T Consensus 28 ~~~eg~~~d-~~g~~l~~~~~~~~~i~~~~~~~~-~~~~~--~-------------------------~~~~~~~l~~~~ 78 (296)
T 3e5z_A 28 TWTEGPVYV-PARSAVIFSDVRQNRTWAWSDDGQ-LSPEM--H-------------------------PSHHQNGHCLNK 78 (296)
T ss_dssp SSEEEEEEE-GGGTEEEEEEGGGTEEEEEETTSC-EEEEE--S-------------------------SCSSEEEEEECT
T ss_pred ccccCCeEe-CCCCEEEEEeCCCCEEEEEECCCC-eEEEE--C-------------------------CCCCcceeeECC
Confidence 345678999 8887 7888888899999998766 32211 1 113467899999
Q ss_pred CCCCEEEEEECCCcEEEEEcCCCCCCCCeeeecc----CCCCeEEEEEeCCCCcEEEEE----e-------------CCC
Q psy4571 114 LHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDA----HTAEVNCLSFNPYSEYILATG----S-------------ADK 172 (437)
Q Consensus 114 ~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~----h~~~v~~l~~~~~~~~~l~sg----s-------------~dg 172 (437)
++.++++...++.|.+||..++ +....... ....+..++++|+|. ++++. + ..+
T Consensus 79 -dg~l~v~~~~~~~i~~~d~~~g---~~~~~~~~~~~~~~~~~~~i~~d~~G~-l~vtd~~~g~~~~~~~~~~~~~~~~~ 153 (296)
T 3e5z_A 79 -QGHLIACSHGLRRLERQREPGG---EWESIADSFEGKKLNSPNDVCLAPDGS-LWFSDPTYGIDKPEEGYGGEMELPGR 153 (296)
T ss_dssp -TCCEEEEETTTTEEEEECSTTC---CEEEEECEETTEECCCCCCEEECTTSC-EEEEECSHHHHCGGGSSCCCCCSSSC
T ss_pred -CCcEEEEecCCCeEEEEcCCCC---cEEEEeeccCCCCCCCCCCEEECCCCC-EEEECCccccccccccccccccCCCc
Confidence 5777776666789999998643 22221111 123467899999998 57763 2 134
Q ss_pred eEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCC-CCCCCCCCCCCceEEEecCccc
Q psy4571 173 TVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEE-QSTEDAEDGPPELLFIHGGHTA 251 (437)
Q Consensus 173 ~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~-~~~~~~~~~~~~~~~~~~~h~~ 251 (437)
.|..++.. ++ ...+..+......++|+|+++. +++.+.++.|.+|++...... .. ...+..+..
T Consensus 154 ~l~~~~~~-g~--~~~~~~~~~~~~gi~~s~dg~~-lv~~~~~~~i~~~~~~~~g~~~~~-----------~~~~~~~~~ 218 (296)
T 3e5z_A 154 WVFRLAPD-GT--LSAPIRDRVKPNGLAFLPSGNL-LVSDTGDNATHRYCLNARGETEYQ-----------GVHFTVEPG 218 (296)
T ss_dssp EEEEECTT-SC--EEEEECCCSSEEEEEECTTSCE-EEEETTTTEEEEEEECSSSCEEEE-----------EEEECCSSS
T ss_pred EEEEECCC-CC--EEEeecCCCCCccEEECCCCCE-EEEeCCCCeEEEEEECCCCcCcCC-----------CeEeeCCCC
Confidence 56666654 23 3444556677899999999985 588888899999999732111 00 011123445
Q ss_pred cEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeee-cCCCCcccccCCCCc
Q psy4571 252 KISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTA-SPTASSTASESPTPT 319 (437)
Q Consensus 252 ~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-s~~g~~l~s~s~d~~ 319 (437)
.+.++++.++|. +.++. ++.|.+||.. ++....+.. +.. +..++| +|+++.|..++.++.
T Consensus 219 ~p~~i~~d~~G~-l~v~~--~~~v~~~~~~-g~~~~~~~~---~~~-~~~~~f~~~d~~~L~v~t~~~l 279 (296)
T 3e5z_A 219 KTDGLRVDAGGL-IWASA--GDGVHVLTPD-GDELGRVLT---PQT-TSNLCFGGPEGRTLYMTVSTEF 279 (296)
T ss_dssp CCCSEEEBTTSC-EEEEE--TTEEEEECTT-SCEEEEEEC---SSC-CCEEEEESTTSCEEEEEETTEE
T ss_pred CCCeEEECCCCC-EEEEc--CCeEEEECCC-CCEEEEEEC---CCC-ceeEEEECCCCCEEEEEcCCeE
Confidence 567899999998 66555 8899999987 655555543 222 666788 689988888776653
No 184
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.47 E-value=9.7e-11 Score=106.21 Aligned_cols=265 Identities=6% Similarity=-0.062 Sum_probs=169.6
Q ss_pred ccceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEee
Q psy4571 33 SIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWH 112 (437)
Q Consensus 33 ~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~s 112 (437)
....+.++++. +++.++++...++.+..|+.. +......... ....+.+++++
T Consensus 13 ~~~~~~~i~~d-~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~-------------------------~~~~~~~i~~~ 65 (299)
T 2z2n_A 13 QDTGPYGITVS-DKGKVWITQHKANMISCINLD-GKITEYPLPT-------------------------PDAKVMCLTIS 65 (299)
T ss_dssp SSCCEEEEEEC-TTSCEEEEETTTTEEEEECTT-CCEEEEECSS-------------------------TTCCEEEEEEC
T ss_pred cCCCccceEEC-CCCCEEEEecCCCcEEEEcCC-CCeEEecCCc-------------------------ccCceeeEEEC
Confidence 34567888888 888888777667888888876 4433221110 11356788999
Q ss_pred CCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccC
Q psy4571 113 LLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESH 192 (437)
Q Consensus 113 p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h 192 (437)
+ ++.++++...++.|..||... ......+......+.++++++++. ++++...++.|..||. +++.........
T Consensus 66 ~-~g~l~v~~~~~~~i~~~~~~g---~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~d~-~g~~~~~~~~~~ 139 (299)
T 2z2n_A 66 S-DGEVWFTENAANKIGRITKKG---IIKEYTLPNPDSAPYGITEGPNGD-IWFTEMNGNRIGRITD-DGKIREYELPNK 139 (299)
T ss_dssp T-TSCEEEEETTTTEEEEECTTS---CEEEEECSSTTCCEEEEEECTTSC-EEEEETTTTEEEEECT-TCCEEEEECSST
T ss_pred C-CCCEEEeCCCCCeEEEECCCC---cEEEEeCCCcCCCceeeEECCCCC-EEEEecCCceEEEECC-CCCEEEecCCCC
Confidence 8 567777766688899998761 111111222455789999999887 5777777889999998 444322223334
Q ss_pred CCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCC
Q psy4571 193 KDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED 272 (437)
Q Consensus 193 ~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~d 272 (437)
...+..+++.|+|. ++++...++.|..||. ++.... .....+...+.++++.++|. +.++...+
T Consensus 140 ~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~-~g~~~~-------------~~~~~~~~~~~~i~~~~~g~-l~v~~~~~ 203 (299)
T 2z2n_A 140 GSYPSFITLGSDNA-LWFTENQNNAIGRITE-SGDITE-------------FKIPTPASGPVGITKGNDDA-LWFVEIIG 203 (299)
T ss_dssp TCCEEEEEECTTSC-EEEEETTTTEEEEECT-TCCEEE-------------EECSSTTCCEEEEEECTTSS-EEEEETTT
T ss_pred CCCCceEEEcCCCC-EEEEeCCCCEEEEEcC-CCcEEE-------------eeCCCCCCcceeEEECCCCC-EEEEccCC
Confidence 56789999999996 6777666789999998 432110 11223345688999999998 77777678
Q ss_pred CeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhh-hcCCCcc
Q psy4571 273 NIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQ-LLGTEEE 351 (437)
Q Consensus 273 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~-~~~h~~~ 351 (437)
+.|..||. +++. ..+... .....+..++++++|.++++...++. +..||. +++.... +.++...
T Consensus 204 ~~i~~~~~-~g~~-~~~~~~-~~~~~~~~i~~~~~g~l~v~~~~~~~-----------i~~~d~-~g~~~~~~~~~~~~~ 268 (299)
T 2z2n_A 204 NKIGRITT-SGEI-TEFKIP-TPNARPHAITAGAGIDLWFTEWGANK-----------IGRLTS-NNIIEEYPIQIKSAE 268 (299)
T ss_dssp TEEEEECT-TCCE-EEEECS-STTCCEEEEEECSTTCEEEEETTTTE-----------EEEEET-TTEEEEEECSSSSCC
T ss_pred ceEEEECC-CCcE-EEEECC-CCCCCceeEEECCCCCEEEeccCCce-----------EEEECC-CCceEEEeCCCCCCc
Confidence 89999999 6543 223221 12344566788999997777655555 566665 3332111 1233334
Q ss_pred ccccCCCCCCc
Q psy4571 352 SSDRHSSDNDT 362 (437)
Q Consensus 352 ~~~~~~~~~~~ 362 (437)
+..+.+ ++|.
T Consensus 269 ~~~i~~-~~g~ 278 (299)
T 2z2n_A 269 PHGICF-DGET 278 (299)
T ss_dssp EEEEEE-CSSC
T ss_pred cceEEe-cCCC
Confidence 555555 6555
No 185
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.46 E-value=4.6e-12 Score=117.23 Aligned_cols=226 Identities=10% Similarity=0.028 Sum_probs=143.8
Q ss_pred EEEecCceEEEEEeeeccc---cccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCC-----CCe
Q psy4571 81 ISCILNISILFFEIIFTQN---FPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHT-----AEV 152 (437)
Q Consensus 81 i~~~~~~~i~~~~~~~~~~---~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~-----~~v 152 (437)
++...++.|.++|....+. ++.......++++| ++.++++...++.|.+||+.+ .+....+.... ...
T Consensus 58 v~~~~~~~v~viD~~t~~~~~~i~~~~~p~~i~~~~-~g~lyv~~~~~~~v~~iD~~t---~~~~~~i~~g~~~~~~~~p 133 (328)
T 3dsm_A 58 IVVNNSHVIFAIDINTFKEVGRITGFTSPRYIHFLS-DEKAYVTQIWDYRIFIINPKT---YEITGYIECPDMDMESGST 133 (328)
T ss_dssp EEEGGGTEEEEEETTTCCEEEEEECCSSEEEEEEEE-TTEEEEEEBSCSEEEEEETTT---TEEEEEEECTTCCTTTCBC
T ss_pred EEEcCCCEEEEEECcccEEEEEcCCCCCCcEEEEeC-CCeEEEEECCCCeEEEEECCC---CeEEEEEEcCCccccCCCc
Confidence 3444567888888654432 33345678999988 455555544789999999983 44444443222 145
Q ss_pred EEEEEeCCCCcEEEEEe-CCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCC----------CeEEEE
Q psy4571 153 NCLSFNPYSEYILATGS-ADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTD----------RRLHVW 221 (437)
Q Consensus 153 ~~l~~~~~~~~~l~sgs-~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~d----------g~i~vw 221 (437)
..+++ ++..++++.. .++.|.++|+.+++. ...+.. ......++++|+|+ +++++..+ +.|.++
T Consensus 134 ~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~-~~~i~~-g~~p~~i~~~~dG~-l~v~~~~~~~~~~~~~~~~~v~~i 208 (328)
T 3dsm_A 134 EQMVQ--YGKYVYVNCWSYQNRILKIDTETDKV-VDELTI-GIQPTSLVMDKYNK-MWTITDGGYEGSPYGYEAPSLYRI 208 (328)
T ss_dssp CCEEE--ETTEEEEEECTTCCEEEEEETTTTEE-EEEEEC-SSCBCCCEECTTSE-EEEEBCCBCTTCSSCBCCCEEEEE
T ss_pred ceEEE--ECCEEEEEcCCCCCEEEEEECCCCeE-EEEEEc-CCCccceEEcCCCC-EEEEECCCccCCccccCCceEEEE
Confidence 56777 3554455544 489999999998664 445543 33457899999997 56666544 789999
Q ss_pred EcCCCCCCCCCCCCCCCCCceEEEecC-ccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCce
Q psy4571 222 DLSKIGEEQSTEDAEDGPPELLFIHGG-HTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGI 300 (437)
Q Consensus 222 d~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 300 (437)
|..+.+... .+.. .......++|+|+++.+++ +.. .|.+||..+++......... ....+.
T Consensus 209 d~~t~~v~~--------------~~~~~~g~~p~~la~~~d~~~lyv-~~~--~v~~~d~~t~~~~~~~~~~~-~~~~p~ 270 (328)
T 3dsm_A 209 DAETFTVEK--------------QFKFKLGDWPSEVQLNGTRDTLYW-INN--DIWRMPVEADRVPVRPFLEF-RDTKYY 270 (328)
T ss_dssp ETTTTEEEE--------------EEECCTTCCCEEEEECTTSCEEEE-ESS--SEEEEETTCSSCCSSCSBCC-CSSCEE
T ss_pred ECCCCeEEE--------------EEecCCCCCceeEEEecCCCEEEE-Ecc--EEEEEECCCCceeeeeeecC-CCCceE
Confidence 998754221 1221 1235789999999995544 433 89999999887532111110 124466
Q ss_pred eeeecC-CCCccccc----CCCCcccccccccccccccccchhhhhhhhh
Q psy4571 301 SSTASP-TASSTASE----SPTPTNSVHEKNYWQGLVLFDILVCEEQRQL 345 (437)
Q Consensus 301 ~~~~s~-~g~~l~s~----s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~ 345 (437)
.++++| ++.+.++. ..++. |.+||.. |+.+.++
T Consensus 271 gi~vdp~~g~lyva~~~~y~~~~~-----------V~v~d~~-g~~~~~i 308 (328)
T 3dsm_A 271 GLTVNPNNGEVYVADAIDYQQQGI-----------VYRYSPQ-GKLIDEF 308 (328)
T ss_dssp EEEECTTTCCEEEEECTTSSSEEE-----------EEEECTT-CCEEEEE
T ss_pred EEEEcCCCCeEEEEcccccccCCE-----------EEEECCC-CCEEEEE
Confidence 678999 55666665 44555 7788876 7766665
No 186
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.46 E-value=3.7e-12 Score=130.25 Aligned_cols=185 Identities=9% Similarity=-0.012 Sum_probs=118.3
Q ss_pred ceEEeeCCCCCEEEEEECCCc-------------EEEEEcCCCCCC-CCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCC
Q psy4571 107 QDVAWHLLHESLFGSVADDQK-------------LMIWDTRSHNVS-KPSHTVDAHTAEVNCLSFNPYSEYILATGSADK 172 (437)
Q Consensus 107 ~~~~~sp~~~~~l~~~~~dg~-------------v~vwd~~~~~~~-~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg 172 (437)
..++|+| ++..|+.++.|.. |++|++.++... ..+.....|...+..+.|+|+|++ |+.++.++
T Consensus 171 ~~~~wsp-Dg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~-l~~~~~~~ 248 (695)
T 2bkl_A 171 ATPKWTP-DSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKY-LFVYILRG 248 (695)
T ss_dssp CCCEECT-TSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCC-EEEEEEET
T ss_pred cceEEec-CCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCE-EEEEEeCC
Confidence 6899999 6778888887766 999999854321 123333345567899999999998 55554444
Q ss_pred ----eEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEe---CCCeEEEEEcCCCCCCCCCCCCCCCCCceEEE
Q psy4571 173 ----TVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSG---TDRRLHVWDLSKIGEEQSTEDAEDGPPELLFI 245 (437)
Q Consensus 173 ----~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~---~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~ 245 (437)
.|.+++..++. ...+..+...+....+ |+|. +++.+. .++.|.+||+.++.... ....
T Consensus 249 ~~~~~l~~~~~~~~~--~~~l~~~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~-----------~~~l 313 (695)
T 2bkl_A 249 WSENDVYWKRPGEKD--FRLLVKGVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARAS-----------WKEI 313 (695)
T ss_dssp TTEEEEEEECTTCSS--CEEEEECSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGG-----------CEEE
T ss_pred CCceEEEEEcCCCCc--eEEeecCCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccC-----------CeEE
Confidence 56666655433 4455556666666666 6777 676665 35789999987653210 0111
Q ss_pred ecCc-cccEEEEEEccCCCeEEEEEeCCCeEEEEeCC-CCCCceeeeeeecccCCceeeeecCCCCccc
Q psy4571 246 HGGH-TAKISDFSWNPNEPWVICSVSEDNIMQEYCDS-TDSDTKTMRLDSIRSNGGISSTASPTASSTA 312 (437)
Q Consensus 246 ~~~h-~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~ 312 (437)
...+ ...+..++|+ ++. ++++...|+..++|.+. +++....+... ....+..++++|++..++
T Consensus 314 ~~~~~~~~l~~~~~~-~~~-lv~~~~~dg~~~l~~~~~~g~~~~~l~~~--~~~~v~~~~~s~d~~~l~ 378 (695)
T 2bkl_A 314 VPEDSSASLLSVSIV-GGH-LSLEYLKDATSEVRVATLKGKPVRTVQLP--GVGAASNLMGLEDLDDAY 378 (695)
T ss_dssp ECCCSSCEEEEEEEE-TTE-EEEEEEETTEEEEEEEETTCCEEEECCCS--SSSEECCCBSCTTCSEEE
T ss_pred ecCCCCCeEEEEEEE-CCE-EEEEEEECCEEEEEEEeCCCCeeEEecCC--CCeEEEEeecCCCCCEEE
Confidence 2222 4567888887 444 88899999998888665 34433333221 122334457888887666
No 187
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.46 E-value=1.8e-12 Score=116.74 Aligned_cols=196 Identities=13% Similarity=0.052 Sum_probs=140.2
Q ss_pred CCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCC-CCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccC-C
Q psy4571 116 ESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHT-AEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESH-K 193 (437)
Q Consensus 116 ~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~-~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h-~ 193 (437)
+++|++++.++.|.+||.+ +++.+..+..+. ..+.++.++|+|+ +++ +.++.|..||. +++. +..+..+ .
T Consensus 5 ~~~lv~~~~~~~v~~~d~~---tG~~~w~~~~~~~~~~~~~~~~pdG~-ilv--s~~~~V~~~d~-~G~~-~W~~~~~~~ 76 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKD---TKEIVWEYPLEKGWECNSVAATKAGE-ILF--SYSKGAKMITR-DGRE-LWNIAAPAG 76 (276)
T ss_dssp CEEEEECTTCSEEEEEETT---TTEEEEEEECCTTCCCCEEEECTTSC-EEE--ECBSEEEEECT-TSCE-EEEEECCTT
T ss_pred CcEEEeeCCCCEEEEEECC---CCeEEEEeCCCccCCCcCeEECCCCC-EEE--eCCCCEEEECC-CCCE-EEEEcCCCC
Confidence 5789999999999999997 566777777665 4788999999998 466 45788999999 6565 6677654 3
Q ss_pred CceEEEEEcCCCCcEEEEEeC-CCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCC
Q psy4571 194 DEIFQVQWSPHNETILASSGT-DRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED 272 (437)
Q Consensus 194 ~~v~~v~~~p~~~~~l~sg~~-dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~d 272 (437)
..+.++.+.|+|+. +++.+. ++.|..+|. .++......... ....+......+++.++|+ ++++...+
T Consensus 77 ~~~~~~~~~~dG~~-lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~--------~~~~~~~~~~~v~~~~~G~-~lv~~~~~ 145 (276)
T 3no2_A 77 CEMQTARILPDGNA-LVAWCGHPSTILEVNM-KGEVLSKTEFET--------GIERPHAQFRQINKNKKGN-YLVPLFAT 145 (276)
T ss_dssp CEEEEEEECTTSCE-EEEEESTTEEEEEECT-TSCEEEEEEECC--------SCSSGGGSCSCCEECTTSC-EEEEETTT
T ss_pred ccccccEECCCCCE-EEEecCCCCEEEEEeC-CCCEEEEEeccC--------CCCcccccccCceECCCCC-EEEEecCC
Confidence 57889999999984 667666 777777775 333221110000 0012223455667889999 78889999
Q ss_pred CeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhc
Q psy4571 273 NIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLL 346 (437)
Q Consensus 273 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~ 346 (437)
+.|..||.+ |+.+..+... ..+..+...++|.+++++..++. +..+|..+|+.+..+.
T Consensus 146 ~~v~~~d~~-G~~~w~~~~~----~~~~~~~~~~~g~~~v~~~~~~~-----------v~~~d~~tG~~~w~~~ 203 (276)
T 3no2_A 146 SEVREIAPN-GQLLNSVKLS----GTPFSSAFLDNGDCLVACGDAHC-----------FVQLNLESNRIVRRVN 203 (276)
T ss_dssp TEEEEECTT-SCEEEEEECS----SCCCEEEECTTSCEEEECBTTSE-----------EEEECTTTCCEEEEEE
T ss_pred CEEEEECCC-CCEEEEEECC----CCccceeEcCCCCEEEEeCCCCe-----------EEEEeCcCCcEEEEec
Confidence 999999998 8887777642 34555677899999988887766 5666766666655553
No 188
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.46 E-value=8.5e-12 Score=116.10 Aligned_cols=223 Identities=9% Similarity=0.020 Sum_probs=135.8
Q ss_pred cCceEeeecCCCc------eeEEEecCCCCeEEEecC----c--eEEEEEeeecccc---ccCCCcceEEeeCCCCCEEE
Q psy4571 56 NEEYKIWKKNTPF------LYDLVVNNYVANISCILN----I--SILFFEIIFTQNF---PFPLSRQDVAWHLLHESLFG 120 (437)
Q Consensus 56 d~~v~iw~~~~~~------~~~~~~~~~~~~i~~~~~----~--~i~~~~~~~~~~~---~~~~~v~~~~~sp~~~~~l~ 120 (437)
+..+.+|+..++. +....|+|++..+....+ + .|.+|++..++.. ..+. +..++|+| +++.|+
T Consensus 42 ~~~l~~~d~~~~~~~~l~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~-~~~~~wsp-dg~~l~ 119 (347)
T 2gop_A 42 ENTIVIENLKNNARRFIENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKN-IRSLEWNE-DSRKLL 119 (347)
T ss_dssp EEEEEEEETTTCCEEEEESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESE-EEEEEECT-TSSEEE
T ss_pred cceEEEEeCCCCceEEcccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCC-ccceeECC-CCCEEE
Confidence 5567788876654 345678888887755432 3 3666665443322 2233 88999999 566666
Q ss_pred EEEC---------------------------CCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCC-
Q psy4571 121 SVAD---------------------------DQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADK- 172 (437)
Q Consensus 121 ~~~~---------------------------dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg- 172 (437)
.++. ...|.+||+.++ +.+..+.. . .+..++|+|+| +++++..++
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~---~~~~~l~~-~-~~~~~~~spdg--~~~~~~~~~~ 192 (347)
T 2gop_A 120 IVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESE---EVIEEFEK-P-RFSSGIWHRDK--IVVNVPHREI 192 (347)
T ss_dssp EEEECCCC---------CCCC---------CEEEEEEEETTTT---EEEEEEEE-E-TTCEEEEETTE--EEEEEECCCS
T ss_pred EEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCC---eEEeeecC-C-CcccccCCCCe--EEEEEecccc
Confidence 6653 256889998743 33233333 3 78899999999 577776542
Q ss_pred ------eEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCC--------CeEEEEEcCCCCCCCCCCCCCCC
Q psy4571 173 ------TVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTD--------RRLHVWDLSKIGEEQSTEDAEDG 238 (437)
Q Consensus 173 ------~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~d--------g~i~vwd~~~~~~~~~~~~~~~~ 238 (437)
...||.+++ .. ...+..+ ..+..+ +|+|+. |+.++.+ ..|.+|| +++.
T Consensus 193 ~~~~~~~~~l~~~d~-~~-~~~l~~~-~~~~~~--spdg~~-l~~~~~~~~~~~~~~~~l~~~d--~~~~---------- 254 (347)
T 2gop_A 193 IPQYFKFWDIYIWED-GK-EEKMFEK-VSFYAV--DSDGER-ILLYGKPEKKYMSEHNKLYIYD--GKEV---------- 254 (347)
T ss_dssp SCCSSCCEEEEEEET-TE-EEEEEEE-ESEEEE--EECSSC-EEEEECCSSSCCCSSCEEEEEC--SSCE----------
T ss_pred cccccccccEEEeCC-Cc-eEEeccC-cceeeE--CCCCCE-EEEEEccccCCccccceEEEEC--CCce----------
Confidence 344444443 33 3344444 555544 999997 4444433 3677887 3221
Q ss_pred CCceEEEecCccccEEE-EEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCC
Q psy4571 239 PPELLFIHGGHTAKISD-FSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPT 317 (437)
Q Consensus 239 ~~~~~~~~~~h~~~v~~-l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d 317 (437)
.....+|...+.. +.|+ ++ ++++++.++.+++| +.+++. ..+.. ....+..++++| .++++++.+
T Consensus 255 ----~~l~~~~~~~~~~~~~~s-dg--~~~~~~~~~~~~l~-~~~g~~-~~~~~---~~~~v~~~~~s~--~~~~~~~~~ 320 (347)
T 2gop_A 255 ----MGILDEVDRGVGQAKIKD-GK--VYFTLFEEGSVNLY-IWDGEI-KPIAK---GRHWIMGFDVDE--IVVYLKETA 320 (347)
T ss_dssp ----EESSTTCCSEEEEEEEET-TE--EEEEEEETTEEEEE-EESSSE-EEEEC---SSSEEEEEEESS--SEEEEEECS
T ss_pred ----EeccccCCcccCCccEEc-Cc--EEEEEecCCcEEEE-EcCCce-EEEec---CCCeEEeeeeeC--cEEEEEcCC
Confidence 1223455667886 8999 76 78889999999999 875433 22211 233445568888 566665555
Q ss_pred Cc
Q psy4571 318 PT 319 (437)
Q Consensus 318 ~~ 319 (437)
+.
T Consensus 321 ~~ 322 (347)
T 2gop_A 321 TR 322 (347)
T ss_dssp SS
T ss_pred CC
Confidence 44
No 189
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.44 E-value=1.6e-12 Score=133.30 Aligned_cols=231 Identities=10% Similarity=-0.024 Sum_probs=150.0
Q ss_pred CcceEEeeCCCCCEEEEEECCC-----cEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCe------
Q psy4571 105 SRQDVAWHLLHESLFGSVADDQ-----KLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKT------ 173 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~~dg-----~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~------ 173 (437)
.+..++||| ++++||.+..++ .|++||+.++ +.......+ ..+..++|+|||+. |+.++.++.
T Consensus 126 ~~~~~~~SP-Dg~~la~~~~~~G~~~~~i~v~d~~tg---~~~~~~~~~-~~~~~~~wspDg~~-l~~~~~~~~~~~~~~ 199 (710)
T 2xdw_A 126 ALRGYAFSE-DGEYFAYGLSASGSDWVTIKFMKVDGA---KELPDVLER-VKFSCMAWTHDGKG-MFYNAYPQQDGKSDG 199 (710)
T ss_dssp EEEEEEECT-TSSEEEEEEEETTCSCEEEEEEETTTT---EEEEEEEEE-ECSCCEEECTTSSE-EEEEECCCCSSCCSS
T ss_pred EEEEEEECC-CCCEEEEEEcCCCCceEEEEEEECCCC---CCCcccccC-cccceEEEEeCCCE-EEEEEECCccccccc
Confidence 467899999 567777655433 8999999843 333221111 23667999999996 777777665
Q ss_pred ----------EEEEeCCCCcee---eeEeccCCCceEEEEEcCCCCcEEEEEeC----CCeEEEEEcCC------CCCCC
Q psy4571 174 ----------VALWDLRNLKLK---LHSFESHKDEIFQVQWSPHNETILASSGT----DRRLHVWDLSK------IGEEQ 230 (437)
Q Consensus 174 ----------i~lwd~~~~~~~---~~~~~~h~~~v~~v~~~p~~~~~l~sg~~----dg~i~vwd~~~------~~~~~ 230 (437)
|.+|++.++... +.....|...+..+.|+|+|++++++... +..|++||+.+ +..
T Consensus 200 ~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~-- 277 (710)
T 2xdw_A 200 TETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGIL-- 277 (710)
T ss_dssp SCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSC--
T ss_pred cccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCcc--
Confidence 999999886521 22222345568899999999975544432 56899999976 211
Q ss_pred CCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCC---CeEEEEeCCCCCC--ceeeeeeecccCCceeeeec
Q psy4571 231 STEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED---NIMQEYCDSTDSD--TKTMRLDSIRSNGGISSTAS 305 (437)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~d---g~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~s 305 (437)
.+..+..+...+.. .|+|+|+.+++.+..+ +.|.+||+.++.. .+.+.... .......++++
T Consensus 278 -----------~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~-~~~~~~~~~~~ 344 (710)
T 2xdw_A 278 -----------KWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEH-EKDVLEWVACV 344 (710)
T ss_dssp -----------CCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCC-SSCEEEEEEEE
T ss_pred -----------ceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCC-CCCeEEEEEEE
Confidence 11223344444444 4889998666555433 4799999988742 23332211 11123345778
Q ss_pred CCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCCccccccCCCCCCcccc
Q psy4571 306 PTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHSSDNDTEDL 365 (437)
Q Consensus 306 ~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~ 365 (437)
+++.++++...++... +.+||+.+|+.++.+..+...+..+.+++++..+.
T Consensus 345 ~~~~lv~~~~~~g~~~---------l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~ 395 (710)
T 2xdw_A 345 RSNFLVLCYLHDVKNT---------LQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIF 395 (710)
T ss_dssp TTTEEEEEEEETTEEE---------EEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEE
T ss_pred cCCEEEEEEEECCEEE---------EEEEECCCCCEEEecCCCCceEEEEecCCCCCEEE
Confidence 7888888887776532 67788777877777777777777788888876544
No 190
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.41 E-value=6.6e-11 Score=106.43 Aligned_cols=217 Identities=8% Similarity=-0.065 Sum_probs=151.4
Q ss_pred CcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeCCCCCEEEEEECC
Q psy4571 46 FDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHLLHESLFGSVADD 125 (437)
Q Consensus 46 ~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~d 125 (437)
.+++|++++.|+.|.+|+..++.+.-..-.+. ...+.+++++| ++++|+ +.+
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~-------------------------~~~~~~~~~~p-dG~ilv--s~~ 55 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEK-------------------------GWECNSVAATK-AGEILF--SYS 55 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCT-------------------------TCCCCEEEECT-TSCEEE--ECB
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCc-------------------------cCCCcCeEECC-CCCEEE--eCC
Confidence 46889999999999999987776543221110 12467889999 677777 457
Q ss_pred CcEEEEEcCCCCCCCCeeeeccC-CCCeEEEEEeCCCCcEEEEEeC-CCeEEEEeCCCCceeeeEec------cCCCceE
Q psy4571 126 QKLMIWDTRSHNVSKPSHTVDAH-TAEVNCLSFNPYSEYILATGSA-DKTVALWDLRNLKLKLHSFE------SHKDEIF 197 (437)
Q Consensus 126 g~v~vwd~~~~~~~~~~~~~~~h-~~~v~~l~~~~~~~~~l~sgs~-dg~i~lwd~~~~~~~~~~~~------~h~~~v~ 197 (437)
+.|..||.. ++.+..+..+ ...+.++.+.|+|.. +++.+. ++.|..+|.. ++. +..+. .+.....
T Consensus 56 ~~V~~~d~~----G~~~W~~~~~~~~~~~~~~~~~dG~~-lv~~~~~~~~v~~vd~~-Gk~-l~~~~~~~~~~~~~~~~~ 128 (276)
T 3no2_A 56 KGAKMITRD----GRELWNIAAPAGCEMQTARILPDGNA-LVAWCGHPSTILEVNMK-GEV-LSKTEFETGIERPHAQFR 128 (276)
T ss_dssp SEEEEECTT----SCEEEEEECCTTCEEEEEEECTTSCE-EEEEESTTEEEEEECTT-SCE-EEEEEECCSCSSGGGSCS
T ss_pred CCEEEECCC----CCEEEEEcCCCCccccccEECCCCCE-EEEecCCCCEEEEEeCC-CCE-EEEEeccCCCCccccccc
Confidence 789999983 4566666654 347889999999995 777776 7888888863 343 44332 1222345
Q ss_pred EEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEE
Q psy4571 198 QVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQE 277 (437)
Q Consensus 198 ~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~i 277 (437)
.+++.++|+ ++++...++.|.+||.. ++. +..+... ..+.++...++|+ ++++++.++.|..
T Consensus 129 ~v~~~~~G~-~lv~~~~~~~v~~~d~~-G~~--------------~w~~~~~-~~~~~~~~~~~g~-~~v~~~~~~~v~~ 190 (276)
T 3no2_A 129 QINKNKKGN-YLVPLFATSEVREIAPN-GQL--------------LNSVKLS-GTPFSSAFLDNGD-CLVACGDAHCFVQ 190 (276)
T ss_dssp CCEECTTSC-EEEEETTTTEEEEECTT-SCE--------------EEEEECS-SCCCEEEECTTSC-EEEECBTTSEEEE
T ss_pred CceECCCCC-EEEEecCCCEEEEECCC-CCE--------------EEEEECC-CCccceeEcCCCC-EEEEeCCCCeEEE
Confidence 667889998 58888899999999987 543 3334433 3455677889998 7878888889999
Q ss_pred EeCCCCCCceeeeeeecc---cCCceeeeecCCCCcccccC
Q psy4571 278 YCDSTDSDTKTMRLDSIR---SNGGISSTASPTASSTASES 315 (437)
Q Consensus 278 wd~~~~~~~~~~~~~~~~---~~~~~~~~~s~~g~~l~s~s 315 (437)
+|..+++.+..+...... ...+..+...++|.++++..
T Consensus 191 ~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 191 LNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp ECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred EeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEec
Confidence 999999888777632211 11234456778998888763
No 191
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.41 E-value=3.4e-12 Score=118.80 Aligned_cols=223 Identities=9% Similarity=0.015 Sum_probs=132.6
Q ss_pred CceEEEEEeeeccccccCCCcceEEeeCCCCCEEEEEECC---C--cEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCC
Q psy4571 86 NISILFFEIIFTQNFPFPLSRQDVAWHLLHESLFGSVADD---Q--KLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPY 160 (437)
Q Consensus 86 ~~~i~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~d---g--~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~ 160 (437)
++.|.+|++..++...+ ..+..++|+| +++.|+.++.+ + .|.+||+.. .+..... .+.. +..++|+|+
T Consensus 42 ~~~l~~~d~~~~~~~~l-~~~~~~~~Sp-Dg~~la~~~~~~~~~~~~l~~~~~~~---g~~~~l~-~~~~-~~~~~wspd 114 (347)
T 2gop_A 42 ENTIVIENLKNNARRFI-ENATMPRISP-DGKKIAFMRANEEKKVSEIWVADLET---LSSKKIL-EAKN-IRSLEWNED 114 (347)
T ss_dssp EEEEEEEETTTCCEEEE-ESCEEEEECT-TSSEEEEEEEETTTTEEEEEEEETTT---TEEEEEE-EESE-EEEEEECTT
T ss_pred cceEEEEeCCCCceEEc-ccCCCeEECC-CCCEEEEEEeccCCCcceEEEEECCC---CceEEEE-cCCC-ccceeECCC
Confidence 34567777654443333 5678899999 56777766543 3 377778763 2333222 2233 999999999
Q ss_pred CCcEEEEEeC---------------------------CCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEe
Q psy4571 161 SEYILATGSA---------------------------DKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSG 213 (437)
Q Consensus 161 ~~~~l~sgs~---------------------------dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~ 213 (437)
|+. |+.++. ...|.+||+.+++. +..+.. . .+..++|+|+| +++++.
T Consensus 115 g~~-l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~-~~~l~~-~-~~~~~~~spdg--~~~~~~ 188 (347)
T 2gop_A 115 SRK-LLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEV-IEEFEK-P-RFSSGIWHRDK--IVVNVP 188 (347)
T ss_dssp SSE-EEEEEECCCC---------CCCC---------CEEEEEEEETTTTEE-EEEEEE-E-TTCEEEEETTE--EEEEEE
T ss_pred CCE-EEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeE-EeeecC-C-CcccccCCCCe--EEEEEe
Confidence 997 555542 25799999988553 234443 3 78899999999 566665
Q ss_pred CCC-------eEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeC-------CCeEEEEe
Q psy4571 214 TDR-------RLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSE-------DNIMQEYC 279 (437)
Q Consensus 214 ~dg-------~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~-------dg~i~iwd 279 (437)
.++ ...+|.+.++. . ..+..+ ..+..+ +|+|+.+++.+.. ...|.+||
T Consensus 189 ~~~~~~~~~~~~~l~~~d~~~-~--------------~~l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d 250 (347)
T 2gop_A 189 HREIIPQYFKFWDIYIWEDGK-E--------------EKMFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD 250 (347)
T ss_dssp CCCSSCCSSCCEEEEEEETTE-E--------------EEEEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC
T ss_pred cccccccccccccEEEeCCCc-e--------------EEeccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC
Confidence 542 34455444221 1 112223 445444 9999955444432 24788888
Q ss_pred CCCCCCceeeeeeecccCCcee-eeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCCccccccCCC
Q psy4571 280 DSTDSDTKTMRLDSIRSNGGIS-STASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHSS 358 (437)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~-~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~ 358 (437)
+++.. .+. ..+...... ..|+ +| ++++++.++. .++| +.+|+. ..+..+...+..+.++
T Consensus 251 --~~~~~-~l~--~~~~~~~~~~~~~s-dg-~~~~~~~~~~-----------~~l~-~~~g~~-~~~~~~~~~v~~~~~s 310 (347)
T 2gop_A 251 --GKEVM-GIL--DEVDRGVGQAKIKD-GK-VYFTLFEEGS-----------VNLY-IWDGEI-KPIAKGRHWIMGFDVD 310 (347)
T ss_dssp --SSCEE-ESS--TTCCSEEEEEEEET-TE-EEEEEEETTE-----------EEEE-EESSSE-EEEECSSSEEEEEEES
T ss_pred --CCceE-ecc--ccCCcccCCccEEc-Cc-EEEEEecCCc-----------EEEE-EcCCce-EEEecCCCeEEeeeee
Confidence 44322 211 111223333 6788 88 8888887776 5777 665544 3444445566666666
Q ss_pred C
Q psy4571 359 D 359 (437)
Q Consensus 359 ~ 359 (437)
+
T Consensus 311 ~ 311 (347)
T 2gop_A 311 E 311 (347)
T ss_dssp S
T ss_pred C
Confidence 6
No 192
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.40 E-value=4.9e-12 Score=118.19 Aligned_cols=176 Identities=15% Similarity=0.152 Sum_probs=129.5
Q ss_pred CcceEEeeCCCCCEEEEEECCCcEEEEEcCCCC--------CCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEE
Q psy4571 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTRSHN--------VSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVAL 176 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~--------~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~l 176 (437)
+++.+++++ ..+++++|+.++ +.+|+++... ...+... ..+.. |..++| ++.. |+++ .++.|++
T Consensus 39 ~~nlLais~-~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~-~~lp~-V~~l~f--d~~~-L~v~-~~~~l~v 110 (388)
T 1xip_A 39 SLQNLDISN-SKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWE-KEIPD-VIFVCF--HGDQ-VLVS-TRNALYS 110 (388)
T ss_dssp CCBCEEEET-TTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEE-EECTT-EEEEEE--ETTE-EEEE-ESSEEEE
T ss_pred cccEEEEcC-CCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEE-eeCCC-eeEEEE--CCCE-EEEE-cCCcEEE
Confidence 689999999 677888898875 5669875321 1122222 24666 999999 7774 7777 8899999
Q ss_pred EeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEE
Q psy4571 177 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDF 256 (437)
Q Consensus 177 wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l 256 (437)
||+++... ......|..++.++.+.+. . ++++..||.|.+||+..... ..+...|+++
T Consensus 111 ~dv~sl~~-~~~~~~~~~~v~~i~~~~p--~-~av~~~dG~L~v~dl~~~~~------------------~~~~~~Vs~v 168 (388)
T 1xip_A 111 LDLEELSE-FRTVTSFEKPVFQLKNVNN--T-LVILNSVNDLSALDLRTKST------------------KQLAQNVTSF 168 (388)
T ss_dssp EESSSTTC-EEEEEECSSCEEEEEECSS--E-EEEEETTSEEEEEETTTCCE------------------EEEEESEEEE
T ss_pred EEchhhhc-cCccceeecceeeEEecCC--C-EEEEECCCCEEEEEccCCcc------------------ccccCCceEE
Confidence 99998664 5556677888988877654 3 77889999999999987542 1245689999
Q ss_pred EEccCCCeEEEEEeCCCeEEEEeCCCCCC--ceeeeeee------cccCCceeeeecCCCCcccc
Q psy4571 257 SWNPNEPWVICSVSEDNIMQEYCDSTDSD--TKTMRLDS------IRSNGGISSTASPTASSTAS 313 (437)
Q Consensus 257 ~~~p~~~~~l~s~~~dg~i~iwd~~~~~~--~~~~~~~~------~~~~~~~~~~~s~~g~~l~s 313 (437)
+|+|+| ++.|..||.+++|+...++. ..++.... .+...+..+.|.+++.++++
T Consensus 169 ~WSpkG---~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 169 DVTNSQ---LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp EECSSE---EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred EEcCCc---eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 999999 45788999999999887654 33442111 13455777899999998875
No 193
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.39 E-value=2e-10 Score=105.02 Aligned_cols=224 Identities=10% Similarity=0.033 Sum_probs=149.3
Q ss_pred eeEEEEeeCCCcceEEE-------eeccCceEeeecCCCc---------------eeEEEecCC-CCeEEEecCceEEEE
Q psy4571 36 RFYRLCVAEPFDDAVEE-------RVINEEYKIWKKNTPF---------------LYDLVVNNY-VANISCILNISILFF 92 (437)
Q Consensus 36 ~v~~~~~~~~~~~~l~t-------gs~d~~v~iw~~~~~~---------------~~~~~~~~~-~~~i~~~~~~~i~~~ 92 (437)
....++|. +++.++++ +..++.+..|+..++. +..+.+.+. .....+.....|.+|
T Consensus 19 ~~~~~~~~-~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~~l~~~ 97 (314)
T 1pjx_A 19 GAEGPVFD-KNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGLLVV 97 (314)
T ss_dssp TCEEEEEC-TTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTTEEEEE
T ss_pred CccCceEC-CCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECCCCEEEE
Confidence 45678898 88988888 6788889999854433 334445555 443444445578888
Q ss_pred Eeeecccccc---------CCCcceEEeeCCCCCEEEEEECC---------------CcEEEEEcCCCCCCCCeeeeccC
Q psy4571 93 EIIFTQNFPF---------PLSRQDVAWHLLHESLFGSVADD---------------QKLMIWDTRSHNVSKPSHTVDAH 148 (437)
Q Consensus 93 ~~~~~~~~~~---------~~~v~~~~~sp~~~~~l~~~~~d---------------g~v~vwd~~~~~~~~~~~~~~~h 148 (437)
|.. ++.... ...+.+++++| ++.++++...+ +.|..+|.. .+ ...+..+
T Consensus 98 d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----g~-~~~~~~~ 170 (314)
T 1pjx_A 98 QTD-GTFEEIAKKDSEGRRMQGCNDCAFDY-EGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD----GQ-MIQVDTA 170 (314)
T ss_dssp ETT-SCEEECCSBCTTSCBCBCCCEEEECT-TSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT----SC-EEEEEEE
T ss_pred eCC-CCEEEEEeccCCCccccCCcCEEECC-CCCEEEEecCcccccccccccccCCCCeEEEECCC----CC-EEEeccC
Confidence 765 332111 12478999999 56777665544 456666654 12 2222233
Q ss_pred CCCeEEEEEe----CCCCcEEEEEeCCCeEEEEeCC-CCce----eeeEeccCC-CceEEEEEcCCCCcEEEEEeCCCeE
Q psy4571 149 TAEVNCLSFN----PYSEYILATGSADKTVALWDLR-NLKL----KLHSFESHK-DEIFQVQWSPHNETILASSGTDRRL 218 (437)
Q Consensus 149 ~~~v~~l~~~----~~~~~~l~sgs~dg~i~lwd~~-~~~~----~~~~~~~h~-~~v~~v~~~p~~~~~l~sg~~dg~i 218 (437)
......++|+ |+++.++++...++.|.+||.+ ++.. ....+..+. ..+..++++++|. ++++...++.|
T Consensus 171 ~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~-l~v~~~~~~~i 249 (314)
T 1pjx_A 171 FQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNN-LLVANWGSSHI 249 (314)
T ss_dssp ESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCC-EEEEEETTTEE
T ss_pred CCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCC-EEEEEcCCCEE
Confidence 3457889999 9997655666678999999986 3321 122333333 5678999999997 67777778899
Q ss_pred EEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCC
Q psy4571 219 HVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDST 282 (437)
Q Consensus 219 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~ 282 (437)
.+||..+++.. ..+..+...+.+++|+|+++.++++...++.|..|++..
T Consensus 250 ~~~d~~~g~~~--------------~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 250 EVFGPDGGQPK--------------MRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp EEECTTCBSCS--------------EEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred EEEcCCCCcEe--------------EEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 99998754322 223344567899999999986666777778999999874
No 194
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.38 E-value=1.3e-11 Score=110.42 Aligned_cols=221 Identities=7% Similarity=-0.043 Sum_probs=143.6
Q ss_pred CcceEEeeCCCCCEEE-EEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCc
Q psy4571 105 SRQDVAWHLLHESLFG-SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLK 183 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~-~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~ 183 (437)
...+++++| ++.+++ +...++.|.+||.... ........+...+.+++++++|. ++++.. ++.|.+||.....
T Consensus 25 ~p~~i~~~~-~g~l~v~~~~~~~~i~~~~~~~~---~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~-~~~i~~~d~~~~~ 98 (270)
T 1rwi_B 25 SPSGVAVDS-AGNVYVTSEGMYGRVVKLATGST---GTTVLPFNGLYQPQGLAVDGAGT-VYVTDF-NNRVVTLAAGSNN 98 (270)
T ss_dssp CEEEEEECT-TCCEEEEECSSSCEEEEECC--------EECCCCSCCSCCCEEECTTCC-EEEEET-TTEEEEECTTCSC
T ss_pred CccceEECC-CCCEEEEccCCCCcEEEecCCCc---ccceEeeCCcCCcceeEECCCCC-EEEEcC-CCEEEEEeCCCce
Confidence 677899999 566776 4467889999987632 22211123335678899999988 566655 8899999988643
Q ss_pred eeeeEec-cCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCC
Q psy4571 184 LKLHSFE-SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNE 262 (437)
Q Consensus 184 ~~~~~~~-~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~ 262 (437)
. ..+. .....+..+++.|+|. ++++...++.|.+|+..+.... .........+.+++++|+|
T Consensus 99 ~--~~~~~~~~~~p~~i~~~~~g~-l~v~~~~~~~i~~~~~~~~~~~--------------~~~~~~~~~p~~i~~~~~g 161 (270)
T 1rwi_B 99 Q--TVLPFDGLNYPEGLAVDTQGA-VYVADRGNNRVVKLAAGSKTQT--------------VLPFTGLNDPDGVAVDNSG 161 (270)
T ss_dssp C--EECCCCSCSSEEEEEECTTCC-EEEEEGGGTEEEEECTTCCSCE--------------ECCCCSCCSCCCEEECTTC
T ss_pred E--eeeecCCcCCCcceEECCCCC-EEEEECCCCEEEEEECCCceeE--------------eeccccCCCceeEEEeCCC
Confidence 2 2232 2235689999999997 6777777889999975443211 1111222356789999999
Q ss_pred CeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhh
Q psy4571 263 PWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQ 342 (437)
Q Consensus 263 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~ 342 (437)
+ ++++...++.|.+||.......... ......+..++++++|.++++...++. +.+||.......
T Consensus 162 ~-l~v~~~~~~~i~~~~~~~~~~~~~~---~~~~~~p~~i~~d~~g~l~v~~~~~~~-----------v~~~~~~~~~~~ 226 (270)
T 1rwi_B 162 N-VYVTDTDNNRVVKLEAESNNQVVLP---FTDITAPWGIAVDEAGTVYVTEHNTNQ-----------VVKLLAGSTTST 226 (270)
T ss_dssp C-EEEEEGGGTEEEEECTTTCCEEECC---CSSCCSEEEEEECTTCCEEEEETTTSC-----------EEEECTTCSCCE
T ss_pred C-EEEEECCCCEEEEEecCCCceEeec---ccCCCCceEEEECCCCCEEEEECCCCc-----------EEEEcCCCCcce
Confidence 8 7878778899999998875432211 111244566789999987777766666 666776544332
Q ss_pred hhhcCCCccccccCCCCCCcc
Q psy4571 343 RQLLGTEEESSDRHSSDNDTE 363 (437)
Q Consensus 343 ~~~~~h~~~~~~~~~~~~~~~ 363 (437)
.....+...+..+.+.++|..
T Consensus 227 ~~~~~~~~~p~~i~~~~~g~l 247 (270)
T 1rwi_B 227 VLPFTGLNTPLAVAVDSDRTV 247 (270)
T ss_dssp ECCCCSCSCEEEEEECTTCCE
T ss_pred eeccCCCCCceeEEECCCCCE
Confidence 222233345667778888763
No 195
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.38 E-value=6.4e-11 Score=112.04 Aligned_cols=218 Identities=10% Similarity=-0.019 Sum_probs=134.3
Q ss_pred EEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCC------------------------------CeEEE------
Q psy4571 40 LCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYV------------------------------ANISC------ 83 (437)
Q Consensus 40 ~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~------------------------------~~i~~------ 83 (437)
+.|+ |+++.|+..+.++.+.+|+..++....+...+.. ..+..
T Consensus 86 ~~~s-pdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~ 164 (396)
T 3c5m_A 86 GFIS-TDERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHT 164 (396)
T ss_dssp CEEC-TTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHT
T ss_pred ceEC-CCCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccC
Confidence 5677 9999999999999999999877665444321111 11100
Q ss_pred ecCceEEEEEeeeccc---cccCCCcceEEeeCCCCCEEEEEECC------CcEEEEEcCCCCCCCCeeeeccC--CCCe
Q psy4571 84 ILNISILFFEIIFTQN---FPFPLSRQDVAWHLLHESLFGSVADD------QKLMIWDTRSHNVSKPSHTVDAH--TAEV 152 (437)
Q Consensus 84 ~~~~~i~~~~~~~~~~---~~~~~~v~~~~~sp~~~~~l~~~~~d------g~v~vwd~~~~~~~~~~~~~~~h--~~~v 152 (437)
..+..|.+||+..++. ......+..+.|+|.++..|+..+.+ ..|.+||+... . ...+..+ ...+
T Consensus 165 ~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~---~-~~~l~~~~~~~~~ 240 (396)
T 3c5m_A 165 NPTCRLIKVDIETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGS---N-VRKIKEHAEGESC 240 (396)
T ss_dssp CCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSC---C-CEESSCCCTTEEE
T ss_pred CCcceEEEEECCCCcEEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCC---c-eeEeeccCCCccc
Confidence 2345788888654332 23355688999999445555555543 35888888632 2 2222223 2358
Q ss_pred EEEEEeCCCCcEEEEEeCC-----CeEEEEeCCCCceeeeEeccCCCceEEEEEcC-CCCcEEEEEe-------------
Q psy4571 153 NCLSFNPYSEYILATGSAD-----KTVALWDLRNLKLKLHSFESHKDEIFQVQWSP-HNETILASSG------------- 213 (437)
Q Consensus 153 ~~l~~~~~~~~~l~sgs~d-----g~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p-~~~~~l~sg~------------- 213 (437)
..++|+|+|++ |+.++.+ +.|.+||+.+++. . .+..... .. +.|+| +|+. ++.++
T Consensus 241 ~~~~~spdg~~-l~~~~~~~~~~~~~l~~~d~~~g~~-~-~l~~~~~-~~-~~~s~~dg~~-l~~~~~~~p~~~~~~~~~ 314 (396)
T 3c5m_A 241 THEFWIPDGSA-MAYVSYFKGQTDRVIYKANPETLEN-E-EVMVMPP-CS-HLMSNFDGSL-MVGDGCDAPVDVADADSY 314 (396)
T ss_dssp EEEEECTTSSC-EEEEEEETTTCCEEEEEECTTTCCE-E-EEEECCS-EE-EEEECSSSSE-EEEEECCC----------
T ss_pred cceEECCCCCE-EEEEecCCCCccceEEEEECCCCCe-E-EeeeCCC-CC-CCccCCCCce-EEEecCCcceeecccccc
Confidence 88999999997 5555433 4599999988653 2 2221222 33 89999 9984 65543
Q ss_pred ---CCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccc-----------cEEEEEEccCCCeEEEEEeCCCeEEEE-
Q psy4571 214 ---TDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTA-----------KISDFSWNPNEPWVICSVSEDNIMQEY- 278 (437)
Q Consensus 214 ---~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~-----------~v~~l~~~p~~~~~l~s~~~dg~i~iw- 278 (437)
.+..|++||+.++.... +..+.. .+..++|+|+|+.+++++..++...+|
T Consensus 315 ~~~~~~~i~~~d~~~~~~~~---------------l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~ 379 (396)
T 3c5m_A 315 NIENDPFLYVLNTKAKSAQK---------------LCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYI 379 (396)
T ss_dssp CCCCCCEEEEEETTTTBCCE---------------EEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEE
T ss_pred ccCCCCcEEEEecccCceEE---------------ccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEE
Confidence 34789999998754211 222222 245678999999665555556655555
Q ss_pred -eCCCC
Q psy4571 279 -CDSTD 283 (437)
Q Consensus 279 -d~~~~ 283 (437)
|+.++
T Consensus 380 ~~~~~~ 385 (396)
T 3c5m_A 380 ADVPES 385 (396)
T ss_dssp EECCTT
T ss_pred EEEccc
Confidence 44444
No 196
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.37 E-value=2.7e-10 Score=103.70 Aligned_cols=231 Identities=11% Similarity=0.056 Sum_probs=144.7
Q ss_pred EEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeCCCCC
Q psy4571 38 YRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHLLHES 117 (437)
Q Consensus 38 ~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp~~~~ 117 (437)
....|+...+.++++...++.|..|+..++..... ..+..+.+++++| +++
T Consensus 16 Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~----------------------------~~~~~~~~i~~~~-dG~ 66 (297)
T 3g4e_A 16 ESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRV----------------------------TMDAPVSSVALRQ-SGG 66 (297)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEE----------------------------ECSSCEEEEEEBT-TSS
T ss_pred cCCeEECCCCEEEEEECCCCEEEEEECCCCcEEEE----------------------------eCCCceEEEEECC-CCC
Confidence 44566633455666666666777777655443211 1234577899999 456
Q ss_pred EEEEEECCCcEEEEEcCCCCCCCCeeeecc--CCCCeEEEEEeCCCCcEEEEEeC---------CCeEEEEeCCCCceee
Q psy4571 118 LFGSVADDQKLMIWDTRSHNVSKPSHTVDA--HTAEVNCLSFNPYSEYILATGSA---------DKTVALWDLRNLKLKL 186 (437)
Q Consensus 118 ~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~--h~~~v~~l~~~~~~~~~l~sgs~---------dg~i~lwd~~~~~~~~ 186 (437)
+++ +. ++.|.+||.+++. .+.+..... ....+++++++|+|. ++++... ...-.||.+..... .
T Consensus 67 l~v-~~-~~~l~~~d~~~g~-~~~~~~~~~~~~~~~~~di~~d~dG~-l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~-~ 141 (297)
T 3g4e_A 67 YVA-TI-GTKFCALNWKEQS-AVVLATVDNDKKNNRFNDGKVDPAGR-YFAGTMAEETAPAVLERHQGALYSLFPDHH-V 141 (297)
T ss_dssp EEE-EE-TTEEEEEETTTTE-EEEEEECCTTCSSEEEEEEEECTTSC-EEEEEEECCSBTTBCCTTCEEEEEECTTSC-E
T ss_pred EEE-EE-CCeEEEEECCCCc-EEEEEecCCCCCCCCCCCEEECCCCC-EEEecCCcccccccccCCCcEEEEEECCCC-E
Confidence 554 44 5679999987431 111211111 123588999999998 4554422 12334554443222 2
Q ss_pred eEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcC--CCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCe
Q psy4571 187 HSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLS--KIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 264 (437)
Q Consensus 187 ~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~--~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~ 264 (437)
..+..+....+.++|+|+++.++++.+.++.|.+||+. ++.... .+.+..+..+......+++.++|.
T Consensus 142 ~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~---------~~~~~~~~~~~~~p~g~~~d~~G~- 211 (297)
T 3g4e_A 142 KKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISN---------RRSVYKLEKEEQIPDGMCIDAEGK- 211 (297)
T ss_dssp EEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEE---------EEEEEECCGGGCEEEEEEEBTTSC-
T ss_pred EEEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccC---------cEEEEECCCCCCCCCeeEECCCCC-
Confidence 22333345568999999998767777778999999984 322110 122333444456788999999997
Q ss_pred EEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeec-CCCCcccccC
Q psy4571 265 VICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTAS-PTASSTASES 315 (437)
Q Consensus 265 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s-~~g~~l~s~s 315 (437)
+.++...++.|..||..+++.+..+.. ....+.+++|. |+++.|...+
T Consensus 212 lwva~~~~~~v~~~d~~tG~~~~~i~~---p~~~~t~~~f~g~d~~~L~vt~ 260 (297)
T 3g4e_A 212 LWVACYNGGRVIRLDPVTGKRLQTVKL---PVDKTTSCCFGGKNYSEMYVTC 260 (297)
T ss_dssp EEEEEETTTEEEEECTTTCCEEEEEEC---SSSBEEEEEEESGGGCEEEEEE
T ss_pred EEEEEcCCCEEEEEcCCCceEEEEEEC---CCCCceEEEEeCCCCCEEEEEc
Confidence 777877888999999998887777754 23456778998 8888665554
No 197
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.35 E-value=1.8e-09 Score=97.71 Aligned_cols=265 Identities=6% Similarity=-0.089 Sum_probs=167.6
Q ss_pred cceeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeC
Q psy4571 34 IYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHL 113 (437)
Q Consensus 34 ~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp 113 (437)
...+.++++. +++.++++...++.+..++.. +....... +. ....+.++++.+
T Consensus 19 ~~~p~~i~~d-~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~-~~------------------------~~~~~~~i~~~~ 71 (300)
T 2qc5_A 19 DSGPYGITSS-EDGKVWFTQHKANKISSLDQS-GRIKEFEV-PT------------------------PDAKVMCLIVSS 71 (300)
T ss_dssp TCCEEEEEEC-TTSCEEEEETTTTEEEEECTT-SCEEEEEC-SS------------------------TTCCEEEEEECT
T ss_pred CCCcceeeEC-CCCCEEEEcCCCCeEEEECCC-CceEEEEC-CC------------------------CCCcceeEEECC
Confidence 4466778888 888888877777888888876 44332211 10 113466888888
Q ss_pred CCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCC
Q psy4571 114 LHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHK 193 (437)
Q Consensus 114 ~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~ 193 (437)
++.++++...++.|..+|.. +. . ...........+.++++.+++. ++++...++.|..+|.. ++.....+....
T Consensus 72 -~g~l~v~~~~~~~v~~~d~~-g~-~-~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~ 145 (300)
T 2qc5_A 72 -LGDIWFTENGANKIGKLSKK-GG-F-TEYPLPQPDSGPYGITEGLNGD-IWFTQLNGDRIGKLTAD-GTIYEYDLPNKG 145 (300)
T ss_dssp -TSCEEEEETTTTEEEEECTT-SC-E-EEEECSSTTCCEEEEEECSTTC-EEEEETTTTEEEEECTT-SCEEEEECSSTT
T ss_pred -CCCEEEEecCCCeEEEECCC-CC-e-EEecCCCCCCCCccceECCCCC-EEEEccCCCeEEEECCC-CCEEEccCCCCC
Confidence 56777766667889999876 21 1 1122222346789999999887 57776668899999987 443222233344
Q ss_pred CceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCC
Q psy4571 194 DEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273 (437)
Q Consensus 194 ~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg 273 (437)
..+..+++.++++ ++++...++.|..+|. .+... ......+...+.++++.++|. +.++...++
T Consensus 146 ~~~~~i~~d~~g~-l~v~~~~~~~i~~~~~-~g~~~-------------~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~ 209 (300)
T 2qc5_A 146 SYPAFITLGSDNA-LWFTENQNNSIGRITN-TGKLE-------------EYPLPTNAAAPVGITSGNDGA-LWFVEIMGN 209 (300)
T ss_dssp CCEEEEEECTTSS-EEEEETTTTEEEEECT-TCCEE-------------EEECSSTTCCEEEEEECTTSS-EEEEETTTT
T ss_pred CCceeEEECCCCC-EEEEecCCCeEEEECC-CCcEE-------------EeeCCCCCCCcceEEECCCCC-EEEEccCCC
Confidence 6789999999997 6777666788999988 32211 111223345688999999997 776776778
Q ss_pred eEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhh-hcCCCccc
Q psy4571 274 IMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQ-LLGTEEES 352 (437)
Q Consensus 274 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~-~~~h~~~~ 352 (437)
.|..||. +++.. .+... .....+..++++++|+++++...++. |..+|. +++.... +......+
T Consensus 210 ~i~~~~~-~g~~~-~~~~~-~~~~~~~~i~~d~~g~l~v~~~~~~~-----------i~~~~~-~g~~~~~~~~~~~~~~ 274 (300)
T 2qc5_A 210 KIGRITT-TGEIS-EYDIP-TPNARPHAITAGKNSEIWFTEWGANQ-----------IGRITN-DNTIQEYQLQTENAEP 274 (300)
T ss_dssp EEEEECT-TCCEE-EEECS-STTCCEEEEEECSTTCEEEEETTTTE-----------EEEECT-TSCEEEEECCSTTCCC
T ss_pred EEEEEcC-CCcEE-EEECC-CCCCCceEEEECCCCCEEEeccCCCe-----------EEEECC-CCcEEEEECCccCCcc
Confidence 8999998 44322 22211 12344566788999997777655555 555665 3332211 12222345
Q ss_pred cccCCCCCCc
Q psy4571 353 SDRHSSDNDT 362 (437)
Q Consensus 353 ~~~~~~~~~~ 362 (437)
..+...++|.
T Consensus 275 ~~i~~~~~g~ 284 (300)
T 2qc5_A 275 HGITFGKDGS 284 (300)
T ss_dssp CCEEECTTSC
T ss_pred ceeEeCCCCC
Confidence 5556666665
No 198
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.34 E-value=1.4e-11 Score=125.99 Aligned_cols=227 Identities=10% Similarity=-0.010 Sum_probs=137.7
Q ss_pred CcceEEeeCCCCCEEE-----EEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCe------
Q psy4571 105 SRQDVAWHLLHESLFG-----SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKT------ 173 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~-----~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~------ 173 (437)
.+..++||| ++++|| .|+.+..|++||+.+++... ...+... ....++|+|||+. |+.++.|..
T Consensus 122 ~~~~~~~SP-DG~~la~~~~~~G~~~~~i~v~dl~tg~~~~-~~~~~~~--~~~~~~wspDg~~-l~~~~~d~~~~~~~~ 196 (695)
T 2bkl_A 122 SLGTWAVSW-DGKKVAFAQKPNAADEAVLHVIDVDSGEWSK-VDVIEGG--KYATPKWTPDSKG-FYYEWLPTDPSIKVD 196 (695)
T ss_dssp EEEEEEECT-TSSEEEEEEEETTCSCCEEEEEETTTCCBCS-SCCBSCC--TTCCCEECTTSSE-EEEEECCCCTTSCGG
T ss_pred EEEEEEECC-CCCEEEEEECCCCCceEEEEEEECCCCCCcC-CcccCcc--cccceEEecCCCE-EEEEEecCCCCCccc
Confidence 567899999 567776 33334689999998543210 1111111 1267999999996 888887766
Q ss_pred -------EEEEeCCCCce---eeeEeccCCCceEEEEEcCCCCcEEEEEeCC-C--eEEEEEcCCCCCCCCCCCCCCCCC
Q psy4571 174 -------VALWDLRNLKL---KLHSFESHKDEIFQVQWSPHNETILASSGTD-R--RLHVWDLSKIGEEQSTEDAEDGPP 240 (437)
Q Consensus 174 -------i~lwd~~~~~~---~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~d-g--~i~vwd~~~~~~~~~~~~~~~~~~ 240 (437)
|++|++.++.. .+.....|...+..+.|+|+|++++++...+ + .|.+|+..++.
T Consensus 197 ~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~------------- 263 (695)
T 2bkl_A 197 ERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKD------------- 263 (695)
T ss_dssp GGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSS-------------
T ss_pred cCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCc-------------
Confidence 99999998652 2223334556789999999999755444433 3 46666443321
Q ss_pred ceEEEecCccccEEEEEEccCCCeEEEEEe---CCCeEEEEeCCCCCC--ceeeeeeecccCCceeeeecCCCCcccccC
Q psy4571 241 ELLFIHGGHTAKISDFSWNPNEPWVICSVS---EDNIMQEYCDSTDSD--TKTMRLDSIRSNGGISSTASPTASSTASES 315 (437)
Q Consensus 241 ~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~---~dg~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s 315 (437)
+..+..+...+....+ ++|. +++.+. .++.|.+||+.++.. ...+.... .......++++ ++.++++..
T Consensus 264 --~~~l~~~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~-~~~~l~~~~~~-~~~lv~~~~ 337 (695)
T 2bkl_A 264 --FRLLVKGVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPED-SSASLLSVSIV-GGHLSLEYL 337 (695)
T ss_dssp --CEEEEECSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCC-SSCEEEEEEEE-TTEEEEEEE
T ss_pred --eEEeecCCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCC-CCCeEEEEEEE-CCEEEEEEE
Confidence 1123334444555556 6777 666665 368999999987753 12222110 11223345666 677888887
Q ss_pred CCCcccccccccccccccccchhhhhhhhhcCC-CccccccCCCCCCcccc
Q psy4571 316 PTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGT-EEESSDRHSSDNDTEDL 365 (437)
Q Consensus 316 ~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h-~~~~~~~~~~~~~~~~~ 365 (437)
.++... +.++|. +|+..+.+..+ ...+..+.+++++..+.
T Consensus 338 ~dg~~~---------l~~~~~-~g~~~~~l~~~~~~~v~~~~~s~d~~~l~ 378 (695)
T 2bkl_A 338 KDATSE---------VRVATL-KGKPVRTVQLPGVGAASNLMGLEDLDDAY 378 (695)
T ss_dssp ETTEEE---------EEEEET-TCCEEEECCCSSSSEECCCBSCTTCSEEE
T ss_pred ECCEEE---------EEEEeC-CCCeeEEecCCCCeEEEEeecCCCCCEEE
Confidence 777632 223333 35555556554 55677778888887655
No 199
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.33 E-value=1.8e-10 Score=118.53 Aligned_cols=229 Identities=9% Similarity=0.022 Sum_probs=135.5
Q ss_pred eeEEEEeeCCCcceEEEeecc-----CceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEE
Q psy4571 36 RFYRLCVAEPFDDAVEERVIN-----EEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVA 110 (437)
Q Consensus 36 ~v~~~~~~~~~~~~l~tgs~d-----~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~ 110 (437)
.+..++|+ |++++|+.++.+ ..|++|+..++....... ....+..++
T Consensus 164 ~~~~~~~S-PDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~---------------------------~~~~~~~~~ 215 (741)
T 1yr2_A 164 ALDAWAAS-DDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADEL---------------------------KWVKFSGLA 215 (741)
T ss_dssp EEEEEEEC-TTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEE---------------------------EEEESCCCE
T ss_pred EEEeEEEC-CCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccC---------------------------CCceeccEE
Confidence 45667777 777777766544 347777766655432110 001135789
Q ss_pred eeCCCCCEEEEEECCCc--------------EEEEEcCCCCCC-CCeeeeccCCCCeEEEEEeCCCCcEEEEEeCC----
Q psy4571 111 WHLLHESLFGSVADDQK--------------LMIWDTRSHNVS-KPSHTVDAHTAEVNCLSFNPYSEYILATGSAD---- 171 (437)
Q Consensus 111 ~sp~~~~~l~~~~~dg~--------------v~vwd~~~~~~~-~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~d---- 171 (437)
|+| + +.|+.++.++. |++|++.++... ..+.....+...+..+.|+|||++ |+..+.+
T Consensus 216 wsp-D-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~-l~~~~~~~~~~ 292 (741)
T 1yr2_A 216 WLG-N-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRW-VVITSSEGTDP 292 (741)
T ss_dssp EST-T-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCE-EEEEEECTTCS
T ss_pred EEC-C-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCE-EEEEEEccCCC
Confidence 999 4 66666666554 889998744211 122222233345889999999997 5444433
Q ss_pred -CeEEEEeCCCCcee-eeEeccCCCceEEEEEcCCCCcEEEEEeC---CCeEEEEEcCCCCCCCCCCCCCCCCCceEEEe
Q psy4571 172 -KTVALWDLRNLKLK-LHSFESHKDEIFQVQWSPHNETILASSGT---DRRLHVWDLSKIGEEQSTEDAEDGPPELLFIH 246 (437)
Q Consensus 172 -g~i~lwd~~~~~~~-~~~~~~h~~~v~~v~~~p~~~~~l~sg~~---dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 246 (437)
..|.+||+.++... ...+..+...+.... +|+|+.+++.... ++.|.+||+.+.. . ......
T Consensus 293 ~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~~--~----------~~~~l~ 359 (741)
T 1yr2_A 293 VNTVHVARVTNGKIGPVTALIPDLKAQWDFV-DGVGDQLWFVSGDGAPLKKIVRVDLSGST--P----------RFDTVV 359 (741)
T ss_dssp CCEEEEEEEETTEECCCEEEECSSSSCEEEE-EEETTEEEEEECTTCTTCEEEEEECSSSS--C----------EEEEEE
T ss_pred cceEEEEECCCCCCcccEEecCCCCceEEEE-eccCCEEEEEECCCCCCCEEEEEeCCCCc--c----------ccEEEe
Confidence 38999999875222 344545555555553 4888864444332 3459999987642 0 111223
Q ss_pred cCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCC-CCCCceeeeeeecccCCceeeeecCCCCccc
Q psy4571 247 GGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDS-TDSDTKTMRLDSIRSNGGISSTASPTASSTA 312 (437)
Q Consensus 247 ~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~ 312 (437)
..+...+..++|. +..++++...|+..++|.+. +++..+.+... ....+..+.++|++..++
T Consensus 360 ~~~~~~l~~~~~~--~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~--~~~~v~~~~~s~d~~~l~ 422 (741)
T 1yr2_A 360 PESKDNLESVGIA--GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLP--GIGSASGLSGRPGDRHAY 422 (741)
T ss_dssp CCCSSEEEEEEEE--BTEEEEEEEETTEEEEEEEETTSCEEEECBCS--SSCEEEEEECCBTCSCEE
T ss_pred cCCCCeEEEEEEE--CCEEEEEEEECCEEEEEEEeCCCCceeeccCC--CCeEEEEeecCCCCCEEE
Confidence 3445557777776 44488899999988887654 34433333221 122344567889988666
No 200
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.33 E-value=4.4e-10 Score=102.76 Aligned_cols=216 Identities=8% Similarity=0.051 Sum_probs=135.4
Q ss_pred ecCceEEEEEeeeccccc--------cCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCe-eee-cc-CCCCe
Q psy4571 84 ILNISILFFEIIFTQNFP--------FPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPS-HTV-DA-HTAEV 152 (437)
Q Consensus 84 ~~~~~i~~~~~~~~~~~~--------~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~-~~~-~~-h~~~v 152 (437)
..++.|..|+...++... ....+.+++++++++.+++ ++..+.|.+||.+ +.. ..+ ... .. ....+
T Consensus 43 ~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v-~~~~~~l~~~d~~-g~~-~~~~~~~~~~~~~~~~ 119 (314)
T 1pjx_A 43 KPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFV-ADMRLGLLVVQTD-GTF-EEIAKKDSEGRRMQGC 119 (314)
T ss_dssp EECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEE-EETTTEEEEEETT-SCE-EECCSBCTTSCBCBCC
T ss_pred CCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEE-EECCCCEEEEeCC-CCE-EEEEeccCCCccccCC
Confidence 456778888754332211 2256889999994255554 4445578899986 321 111 100 11 12358
Q ss_pred EEEEEeCCCCcEEEEEeCC---------------CeEEEEeCCCCceeeeEeccCCCceEEEEEc----CCCCcEEEEEe
Q psy4571 153 NCLSFNPYSEYILATGSAD---------------KTVALWDLRNLKLKLHSFESHKDEIFQVQWS----PHNETILASSG 213 (437)
Q Consensus 153 ~~l~~~~~~~~~l~sgs~d---------------g~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~----p~~~~~l~sg~ 213 (437)
.+++++++|. ++++...+ +.|..+|.. ++ ...+..+......++++ |+++.++++..
T Consensus 120 ~~i~~d~~g~-l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~--~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~ 195 (314)
T 1pjx_A 120 NDCAFDYEGN-LWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQ--MIQVDTAFQFPNGIAVRHMNDGRPYQLIVAET 195 (314)
T ss_dssp CEEEECTTSC-EEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SC--EEEEEEEESSEEEEEEEECTTSCEEEEEEEET
T ss_pred cCEEECCCCC-EEEEecCcccccccccccccCCCCeEEEECCC-CC--EEEeccCCCCcceEEEecccCCCCCEEEEEEC
Confidence 8999999997 46665544 567777765 33 22232334556889999 99976566666
Q ss_pred CCCeEEEEEcC-CCCCCCCCCCCCCCCCceEEEecCcc-ccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeee
Q psy4571 214 TDRRLHVWDLS-KIGEEQSTEDAEDGPPELLFIHGGHT-AKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRL 291 (437)
Q Consensus 214 ~dg~i~vwd~~-~~~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 291 (437)
.++.|.+||+. .+.... ...+..+.++. ..+..++++++|. ++++...++.|.+||.++++....+..
T Consensus 196 ~~~~i~~~~~~~~g~~~~---------~~~~~~~~~~~~~~p~~i~~d~~G~-l~v~~~~~~~i~~~d~~~g~~~~~~~~ 265 (314)
T 1pjx_A 196 PTKKLWSYDIKGPAKIEN---------KKVWGHIPGTHEGGADGMDFDEDNN-LLVANWGSSHIEVFGPDGGQPKMRIRC 265 (314)
T ss_dssp TTTEEEEEEEEETTEEEE---------EEEEEECCCCSSCEEEEEEEBTTCC-EEEEEETTTEEEEECTTCBSCSEEEEC
T ss_pred CCCeEEEEECCCCCcccc---------ceEEEECCCCCCCCCCceEECCCCC-EEEEEcCCCEEEEEcCCCCcEeEEEeC
Confidence 78999999986 221100 01222333443 5678899999998 777777889999999987776665543
Q ss_pred eecccCCceeeeecCCCCcc-cccCCCCc
Q psy4571 292 DSIRSNGGISSTASPTASST-ASESPTPT 319 (437)
Q Consensus 292 ~~~~~~~~~~~~~s~~g~~l-~s~s~d~~ 319 (437)
+...+..++++|+|+.| ++...++.
T Consensus 266 ---~~~~~~~i~~~~dg~~l~v~~~~~~~ 291 (314)
T 1pjx_A 266 ---PFEKPSNLHFKPQTKTIFVTEHENNA 291 (314)
T ss_dssp ---SSSCEEEEEECTTSSEEEEEETTTTE
T ss_pred ---CCCCceeEEECCCCCEEEEEeCCCCe
Confidence 23456677889999944 44444444
No 201
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.33 E-value=3.3e-10 Score=104.68 Aligned_cols=228 Identities=11% Similarity=0.024 Sum_probs=150.9
Q ss_pred EEEEeeCCCcceEEEeeccCceEeeecCCCcee----------EEEecCCCCeEEEe-cCceEEEEEeeecc---ccccC
Q psy4571 38 YRLCVAEPFDDAVEERVINEEYKIWKKNTPFLY----------DLVVNNYVANISCI-LNISILFFEIIFTQ---NFPFP 103 (437)
Q Consensus 38 ~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~----------~~~~~~~~~~i~~~-~~~~i~~~~~~~~~---~~~~~ 103 (437)
..+++. .+.++++...++.+.+||..++.+. .+++++......+. .++.|.++|....+ .++..
T Consensus 47 ~~i~~~--~~~lyv~~~~~~~v~viD~~t~~~~~~i~~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g 124 (328)
T 3dsm_A 47 QSMVIR--DGIGWIVVNNSHVIFAIDINTFKEVGRITGFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECP 124 (328)
T ss_dssp EEEEEE--TTEEEEEEGGGTEEEEEETTTCCEEEEEECCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECT
T ss_pred eEEEEE--CCEEEEEEcCCCEEEEEECcccEEEEEcCCCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcC
Confidence 445664 3556667777899999997765543 33343333222333 57889999865433 23333
Q ss_pred C------CcceEEeeCCCCCEEEEEE-CCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCC-----
Q psy4571 104 L------SRQDVAWHLLHESLFGSVA-DDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSAD----- 171 (437)
Q Consensus 104 ~------~v~~~~~sp~~~~~l~~~~-~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~d----- 171 (437)
. ....+++ . ++.++++.. .++.|.++|+.+ .+.+..+.. ......++++|+|+ +++++..+
T Consensus 125 ~~~~~~~~p~~i~~-~-~~~lyv~~~~~~~~v~viD~~t---~~~~~~i~~-g~~p~~i~~~~dG~-l~v~~~~~~~~~~ 197 (328)
T 3dsm_A 125 DMDMESGSTEQMVQ-Y-GKYVYVNCWSYQNRILKIDTET---DKVVDELTI-GIQPTSLVMDKYNK-MWTITDGGYEGSP 197 (328)
T ss_dssp TCCTTTCBCCCEEE-E-TTEEEEEECTTCCEEEEEETTT---TEEEEEEEC-SSCBCCCEECTTSE-EEEEBCCBCTTCS
T ss_pred CccccCCCcceEEE-E-CCEEEEEcCCCCCEEEEEECCC---CeEEEEEEc-CCCccceEEcCCCC-EEEEECCCccCCc
Confidence 4 5677888 3 455555544 488999999984 444444443 23456889999998 46666554
Q ss_pred -----CeEEEEeCCCCceeeeEeccC-CCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEE
Q psy4571 172 -----KTVALWDLRNLKLKLHSFESH-KDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFI 245 (437)
Q Consensus 172 -----g~i~lwd~~~~~~~~~~~~~h-~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~ 245 (437)
+.|.++|.++++. ...+... ......++++|+++. +..+.. .|.+||..+++..... .
T Consensus 198 ~~~~~~~v~~id~~t~~v-~~~~~~~~g~~p~~la~~~d~~~-lyv~~~--~v~~~d~~t~~~~~~~------------~ 261 (328)
T 3dsm_A 198 YGYEAPSLYRIDAETFTV-EKQFKFKLGDWPSEVQLNGTRDT-LYWINN--DIWRMPVEADRVPVRP------------F 261 (328)
T ss_dssp SCBCCCEEEEEETTTTEE-EEEEECCTTCCCEEEEECTTSCE-EEEESS--SEEEEETTCSSCCSSC------------S
T ss_pred cccCCceEEEEECCCCeE-EEEEecCCCCCceeEEEecCCCE-EEEEcc--EEEEEECCCCceeeee------------e
Confidence 7899999998654 4444321 236799999999986 444433 8999999876542210 0
Q ss_pred ecCccccEEEEEEccCCCeEEEEE----eCCCeEEEEeCCCCCCceeeee
Q psy4571 246 HGGHTAKISDFSWNPNEPWVICSV----SEDNIMQEYCDSTDSDTKTMRL 291 (437)
Q Consensus 246 ~~~h~~~v~~l~~~p~~~~~l~s~----~~dg~i~iwd~~~~~~~~~~~~ 291 (437)
..........++++|++.+++++. ..++.|.+||.. ++.+..+..
T Consensus 262 ~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i~~ 310 (328)
T 3dsm_A 262 LEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEFYV 310 (328)
T ss_dssp BCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CCEEEEEEE
T ss_pred ecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CCEEEEEEe
Confidence 111235688999999666588887 778999999998 888887764
No 202
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.32 E-value=8.1e-10 Score=105.20 Aligned_cols=202 Identities=6% Similarity=-0.054 Sum_probs=124.2
Q ss_pred EEeeCCCCCEEEEEECCC--cEEEEEcCCCCCCCCeeee----ccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCC
Q psy4571 109 VAWHLLHESLFGSVADDQ--KLMIWDTRSHNVSKPSHTV----DAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNL 182 (437)
Q Consensus 109 ~~~sp~~~~~l~~~~~dg--~v~vwd~~~~~~~~~~~~~----~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~ 182 (437)
++|+| +++.|+++..++ .|.+++.... .....+ ......+.+++++|++.. |+.+..++.|..||..+.
T Consensus 176 ia~~~-~g~~l~~~d~~~~~~I~~~d~~~~---~~~~~~g~~~~~~~~~p~~iav~p~~g~-lyv~d~~~~I~~~d~~~~ 250 (409)
T 3hrp_A 176 PAVTK-DKQRVYSIGWEGTHTVYVYMKASG---WAPTRIGQLGSTFSGKIGAVALDETEEW-LYFVDSNKNFGRFNVKTQ 250 (409)
T ss_dssp CEECT-TSSEEEEEBSSTTCEEEEEEGGGT---TCEEEEEECCTTSCSCCCBCEECTTSSE-EEEECTTCEEEEEETTTC
T ss_pred eeEec-CCCcEEEEecCCCceEEEEEcCCC---ceeEEeeeccchhcCCcEEEEEeCCCCe-EEEEECCCcEEEEECCCC
Confidence 89999 566777777665 7888888632 222222 214456789999996554 555777899999999875
Q ss_pred ceeeeE---eccCCCce--EEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCC-ceEEEecCccccEEEE
Q psy4571 183 KLKLHS---FESHKDEI--FQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPP-ELLFIHGGHTAKISDF 256 (437)
Q Consensus 183 ~~~~~~---~~~h~~~v--~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~-~~~~~~~~h~~~v~~l 256 (437)
...+.. ..++...- ..++|+|++..++++...++.|+.|+..... ........... ..-......-.....+
T Consensus 251 ~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~~--~~~~g~~~~~g~~dg~~~~~~~~~P~gi 328 (409)
T 3hrp_A 251 EVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGEC--EWFCGSATQKTVQDGLREEALFAQPNGM 328 (409)
T ss_dssp CEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCCE--EEEEECTTCCSCBCEEGGGCBCSSEEEE
T ss_pred CEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCCE--EEEEeCCCCCCcCCCcccccEeCCCeEE
Confidence 532210 11222222 3899999755678787888999999876531 00000000000 0000000112347899
Q ss_pred EEccCCCeEEEEEe-CCCeEEEEeCCCCCCceeeeeeec------------ccCCceeeeecCCCCcccccCCCCc
Q psy4571 257 SWNPNEPWVICSVS-EDNIMQEYCDSTDSDTKTMRLDSI------------RSNGGISSTASPTASSTASESPTPT 319 (437)
Q Consensus 257 ~~~p~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~------------~~~~~~~~~~s~~g~~l~s~s~d~~ 319 (437)
+++|+|. ++++-. .++.|+.|++.++.. ..+..... .-..+..++++++|.++++...++.
T Consensus 329 a~d~dG~-lyvad~~~~~~I~~~~~~~G~v-~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~ 402 (409)
T 3hrp_A 329 TVDEDGN-FYIVDGFKGYCLRKLDILDGYV-STVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKA 402 (409)
T ss_dssp EECTTCC-EEEEETTTTCEEEEEETTTTEE-EEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCE
T ss_pred EEeCCCC-EEEEeCCCCCEEEEEECCCCEE-EEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCe
Confidence 9999999 888888 899999999877642 22222100 0134566788999888887776665
No 203
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.32 E-value=3.7e-09 Score=95.67 Aligned_cols=189 Identities=3% Similarity=-0.074 Sum_probs=126.8
Q ss_pred CCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCc
Q psy4571 104 LSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLK 183 (437)
Q Consensus 104 ~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~ 183 (437)
..+.++++.| ++.++++...++.|.+||.. +. ........+...+.+++++++|. ++++...++.|..||. +++
T Consensus 99 ~~~~~i~~~~-~g~l~v~~~~~~~i~~~d~~-g~--~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~-~g~ 172 (299)
T 2z2n_A 99 SAPYGITEGP-NGDIWFTEMNGNRIGRITDD-GK--IREYELPNKGSYPSFITLGSDNA-LWFTENQNNAIGRITE-SGD 172 (299)
T ss_dssp CCEEEEEECT-TSCEEEEETTTTEEEEECTT-CC--EEEEECSSTTCCEEEEEECTTSC-EEEEETTTTEEEEECT-TCC
T ss_pred CCceeeEECC-CCCEEEEecCCceEEEECCC-CC--EEEecCCCCCCCCceEEEcCCCC-EEEEeCCCCEEEEEcC-CCc
Confidence 3578899998 56777777678899999983 21 11112223455789999999987 5776667789999999 544
Q ss_pred eeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCC
Q psy4571 184 LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEP 263 (437)
Q Consensus 184 ~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~ 263 (437)
............+..+++.++|. ++++...++.|.+||. ++... ......+...+.++++.++|.
T Consensus 173 ~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~-~g~~~-------------~~~~~~~~~~~~~i~~~~~g~ 237 (299)
T 2z2n_A 173 ITEFKIPTPASGPVGITKGNDDA-LWFVEIIGNKIGRITT-SGEIT-------------EFKIPTPNARPHAITAGAGID 237 (299)
T ss_dssp EEEEECSSTTCCEEEEEECTTSS-EEEEETTTTEEEEECT-TCCEE-------------EEECSSTTCCEEEEEECSTTC
T ss_pred EEEeeCCCCCCcceeEEECCCCC-EEEEccCCceEEEECC-CCcEE-------------EEECCCCCCCceeEEECCCCC
Confidence 32222333455688999999987 6767666889999998 43211 111233456789999999998
Q ss_pred eEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCC
Q psy4571 264 WVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTP 318 (437)
Q Consensus 264 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~ 318 (437)
++++...++.|..||.. + ....+... .....+..+++ ++|.++++.+.++
T Consensus 238 -l~v~~~~~~~i~~~d~~-g-~~~~~~~~-~~~~~~~~i~~-~~g~l~v~~~~~~ 287 (299)
T 2z2n_A 238 -LWFTEWGANKIGRLTSN-N-IIEEYPIQ-IKSAEPHGICF-DGETIWFAMECDK 287 (299)
T ss_dssp -EEEEETTTTEEEEEETT-T-EEEEEECS-SSSCCEEEEEE-CSSCEEEEETTTE
T ss_pred -EEEeccCCceEEEECCC-C-ceEEEeCC-CCCCccceEEe-cCCCEEEEecCCc
Confidence 77676678899999983 3 23333221 12234556677 8888887765444
No 204
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.32 E-value=1.1e-10 Score=106.16 Aligned_cols=224 Identities=9% Similarity=0.067 Sum_probs=146.6
Q ss_pred cceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCcee
Q psy4571 106 RQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLK 185 (437)
Q Consensus 106 v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~ 185 (437)
..+..|+|.++.++++...++.|..||..+. . ...+ .....+.+++++|+|. ++++ . ++.|.+||.++++..
T Consensus 15 ~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~---~-~~~~-~~~~~~~~i~~~~dG~-l~v~-~-~~~l~~~d~~~g~~~ 86 (297)
T 3g4e_A 15 GESPVWEEVSNSLLFVDIPAKKVCRWDSFTK---Q-VQRV-TMDAPVSSVALRQSGG-YVAT-I-GTKFCALNWKEQSAV 86 (297)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTTC---C-EEEE-ECSSCEEEEEEBTTSS-EEEE-E-TTEEEEEETTTTEEE
T ss_pred ccCCeEECCCCEEEEEECCCCEEEEEECCCC---c-EEEE-eCCCceEEEEECCCCC-EEEE-E-CCeEEEEECCCCcEE
Confidence 3578999976777888778899999999843 2 2222 3456799999999998 3544 4 568999999875531
Q ss_pred ee-Eecc--CCCceEEEEEcCCCCcEEEEEeCC---------CeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccE
Q psy4571 186 LH-SFES--HKDEIFQVQWSPHNETILASSGTD---------RRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKI 253 (437)
Q Consensus 186 ~~-~~~~--h~~~v~~v~~~p~~~~~l~sg~~d---------g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 253 (437)
.. .... ....++.++++|+|+ ++++...+ ..-.+|.+..... +.....+....
T Consensus 87 ~~~~~~~~~~~~~~~di~~d~dG~-l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~--------------~~~~~~~~~~p 151 (297)
T 3g4e_A 87 VLATVDNDKKNNRFNDGKVDPAGR-YFAGTMAEETAPAVLERHQGALYSLFPDHH--------------VKKYFDQVDIS 151 (297)
T ss_dssp EEEECCTTCSSEEEEEEEECTTSC-EEEEEEECCSBTTBCCTTCEEEEEECTTSC--------------EEEEEEEESBE
T ss_pred EEEecCCCCCCCCCCCEEECCCCC-EEEecCCcccccccccCCCcEEEEEECCCC--------------EEEEeeccccc
Confidence 11 1111 123578999999998 45544221 2345555543211 11122233456
Q ss_pred EEEEEccCCCeEEEEEeCCCeEEEEeC--CCCCCce--eeeeeecccCCceeeeecCCCCcccccCCCCccccccccccc
Q psy4571 254 SDFSWNPNEPWVICSVSEDNIMQEYCD--STDSDTK--TMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQ 329 (437)
Q Consensus 254 ~~l~~~p~~~~~l~s~~~dg~i~iwd~--~~~~~~~--~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~ 329 (437)
+.++|+|+++.++++.+.++.|.+||+ .++.... .+.........+-.++++++|.++++....+.
T Consensus 152 ngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~---------- 221 (297)
T 3g4e_A 152 NGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGR---------- 221 (297)
T ss_dssp EEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTE----------
T ss_pred cceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCE----------
Confidence 889999999977778888899999997 4554321 11111111233455688999988777665555
Q ss_pred ccccccchhhhhhhhhcCCCccccccCCC-CCCcc
Q psy4571 330 GLVLFDILVCEEQRQLLGTEEESSDRHSS-DNDTE 363 (437)
Q Consensus 330 ~i~~wd~~~~~~~~~~~~h~~~~~~~~~~-~~~~~ 363 (437)
|..||..+|+.+..+..+...+.+++|. |++..
T Consensus 222 -v~~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~~~ 255 (297)
T 3g4e_A 222 -VIRLDPVTGKRLQTVKLPVDKTTSCCFGGKNYSE 255 (297)
T ss_dssp -EEEECTTTCCEEEEEECSSSBEEEEEEESGGGCE
T ss_pred -EEEEcCCCceEEEEEECCCCCceEEEEeCCCCCE
Confidence 7889998999888887776677888886 66653
No 205
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.29 E-value=1.8e-10 Score=107.55 Aligned_cols=189 Identities=11% Similarity=-0.029 Sum_probs=125.0
Q ss_pred eeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeCCC
Q psy4571 36 RFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHLLH 115 (437)
Q Consensus 36 ~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp~~ 115 (437)
.++.++++ +...++++|+.|+ +++|+.....-.. .+...+ .......+++. |+.++| +
T Consensus 39 ~~nlLais-~~~gll~a~~~~~-l~v~~~~~l~~~~--~~~~~~--------------~~~~~~~~lp~-V~~l~f---d 96 (388)
T 1xip_A 39 SLQNLDIS-NSKSLFVAASGSK-AVVGELQLLRDHI--TSDSTP--------------LTFKWEKEIPD-VIFVCF---H 96 (388)
T ss_dssp CCBCEEEE-TTTTEEEEEETTE-EEEEEHHHHHHHH--HSSSCC--------------CCCSEEEECTT-EEEEEE---E
T ss_pred cccEEEEc-CCCCEEEEeCCCE-EEEEEhhHhhhhh--cccccc--------------ccceEEeeCCC-eeEEEE---C
Confidence 57788888 7777888888775 4558743211000 000000 00001223556 899999 5
Q ss_pred CCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCc
Q psy4571 116 ESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDE 195 (437)
Q Consensus 116 ~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~ 195 (437)
+.+|+++ .++.|++||+.+ .........|..++.++.+.+. . +++++.||.|.+||+.++.. .. +...
T Consensus 97 ~~~L~v~-~~~~l~v~dv~s---l~~~~~~~~~~~~v~~i~~~~p--~-~av~~~dG~L~v~dl~~~~~-~~----~~~~ 164 (388)
T 1xip_A 97 GDQVLVS-TRNALYSLDLEE---LSEFRTVTSFEKPVFQLKNVNN--T-LVILNSVNDLSALDLRTKST-KQ----LAQN 164 (388)
T ss_dssp TTEEEEE-ESSEEEEEESSS---TTCEEEEEECSSCEEEEEECSS--E-EEEEETTSEEEEEETTTCCE-EE----EEES
T ss_pred CCEEEEE-cCCcEEEEEchh---hhccCccceeecceeeEEecCC--C-EEEEECCCCEEEEEccCCcc-cc----ccCC
Confidence 7888888 789999999984 3445556677888988877654 3 88899999999999997554 22 4568
Q ss_pred eEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCC--CCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEE
Q psy4571 196 IFQVQWSPHNETILASSGTDRRLHVWDLSKIGE--EQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVI 266 (437)
Q Consensus 196 v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~--~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l 266 (437)
|+|++|+|+| ++.|..||++++|+...... ..... .+..+....+|...|.+|.|.+++.+++
T Consensus 165 Vs~v~WSpkG---~~vg~~dg~i~~~~~~~~~~~~k~~I~-----~Pp~~~~~~~~~~~V~sI~wl~~~~flv 229 (388)
T 1xip_A 165 VTSFDVTNSQ---LAVLLKDRSFQSFAWRNGEMEKQFEFS-----LPSELEELPVEEYSPLSVTILSPQDFLA 229 (388)
T ss_dssp EEEEEECSSE---EEEEETTSCEEEEEEETTEEEEEEEEC-----CCHHHHTSCTTTSEEEEEEESSSSEEEE
T ss_pred ceEEEEcCCc---eEEEEcCCcEEEEcCCCccccccceec-----CCcccccccCCCeeEEEEEEecCCeEEE
Confidence 9999999999 46788999999998876542 11100 0000000014778999999999998444
No 206
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.27 E-value=8.6e-09 Score=96.73 Aligned_cols=259 Identities=8% Similarity=-0.013 Sum_probs=158.3
Q ss_pred ceEeeecCCCcee---------EEEecCCCCeEEEec-----------CceEEEEEeeecc---ccccC--------CCc
Q psy4571 58 EYKIWKKNTPFLY---------DLVVNNYVANISCIL-----------NISILFFEIIFTQ---NFPFP--------LSR 106 (437)
Q Consensus 58 ~v~iw~~~~~~~~---------~~~~~~~~~~i~~~~-----------~~~i~~~~~~~~~---~~~~~--------~~v 106 (437)
+|.++|..++.+. .+.+++++..+.... ++.|.++|....+ .++.. ...
T Consensus 48 ~v~v~D~~t~~~~~~i~~g~~p~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p 127 (373)
T 2mad_H 48 QQWVLDAGSGSILGHVNGGFLPNPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYS 127 (373)
T ss_pred EEEEEECCCCeEEEEecCCCCCCeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCc
Confidence 5666664433322 666777777775542 5678899865432 22222 235
Q ss_pred ceEEeeCCCCCEEEEEEC--CCcEEEEEcCCCCCCCCeee-eccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCc
Q psy4571 107 QDVAWHLLHESLFGSVAD--DQKLMIWDTRSHNVSKPSHT-VDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLK 183 (437)
Q Consensus 107 ~~~~~sp~~~~~l~~~~~--dg~v~vwd~~~~~~~~~~~~-~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~ 183 (437)
..++|+| ++++|+++.. ++.|.++| . ..+.+.. +.. .+ ++.+.|++...+++.+.||.+.++|. +++
T Consensus 128 ~~~~~sp-DG~~l~v~n~~~~~~v~viD-~---t~~~~~~~i~~-~~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~ 197 (373)
T 2mad_H 128 WMNANTP-NNADLLFFQFAAGPAVGLVV-Q---GGSSDDQLLSS-PT---CYHIHPGAPSTFYLLCAQGGLAKTDH-AGG 197 (373)
T ss_pred cceEECC-CCCEEEEEecCCCCeEEEEE-C---CCCEEeEEcCC-Cc---eEEEEeCCCceEEEEcCCCCEEEEEC-CCc
Confidence 6899999 5667766653 57899999 7 4455555 432 22 35567777666888889999999999 755
Q ss_pred eeeeEec-----cCCCce-EEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEE
Q psy4571 184 LKLHSFE-----SHKDEI-FQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFS 257 (437)
Q Consensus 184 ~~~~~~~-----~h~~~v-~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~ 257 (437)
. ..... ....++ ....+.+++..+++.. .++.+.+.|+.......... ....... .....-.......+.
T Consensus 198 ~-~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~-~~~~v~vid~~~~~~~v~~~-~~~~~~~-~~~~~~~p~g~~~~~ 273 (373)
T 2mad_H 198 A-AGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPV-YSGKILQADISAAGATNKAP-IDALSGG-RKADTWRPGGWQQVA 273 (373)
T ss_pred E-EEEEeccccccCCcceeecceeEecCCEEEEEc-CCceEEEEeccCCcceEeee-eeecCCc-ccccceecCceEeEE
Confidence 4 32211 111221 2345667666544443 67899999997543211000 0000000 000000122344578
Q ss_pred EccCCCeEEEEEe---------CCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCC-cccccC-CCCcccccccc
Q psy4571 258 WNPNEPWVICSVS---------EDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTAS-STASES-PTPTNSVHEKN 326 (437)
Q Consensus 258 ~~p~~~~~l~s~~---------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~-~l~s~s-~d~~~~~~~~~ 326 (437)
++|+++.++++.. .++.|.+.|+.+++.+..+.. ......++++|||+ .++++. .++.
T Consensus 274 ~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~----g~~p~~i~~s~Dg~~~l~v~~~~~~~------- 342 (373)
T 2mad_H 274 YLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISL----GHDVDAISVAQDGGPDLYALSAGTEV------- 342 (373)
T ss_pred ECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEEC----CCCcCeEEECCCCCeEEEEEcCCCCe-------
Confidence 9999986665543 246899999999988888764 23577889999999 677765 4666
Q ss_pred cccccccccchhhhhhhhh
Q psy4571 327 YWQGLVLFDILVCEEQRQL 345 (437)
Q Consensus 327 ~~~~i~~wd~~~~~~~~~~ 345 (437)
+.++|..+++.++.+
T Consensus 343 ----V~ViD~~t~~vv~~i 357 (373)
T 2mad_H 343 ----LHIYDAGAGDQDQST 357 (373)
T ss_pred ----EEEEECCCCCEEeee
Confidence 899999999888763
No 207
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.25 E-value=8.1e-09 Score=95.21 Aligned_cols=190 Identities=12% Similarity=0.069 Sum_probs=118.0
Q ss_pred CCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeec-cC-CCCeEEEEEeCCCCcEEEEEeC------CCeE
Q psy4571 103 PLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVD-AH-TAEVNCLSFNPYSEYILATGSA------DKTV 174 (437)
Q Consensus 103 ~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~-~h-~~~v~~l~~~~~~~~~l~sgs~------dg~i 174 (437)
+..+.+++|+| ++.++++ +.+| |.+||..++.. ..+.... .. ...+.+++++|+|. ++++... .+.|
T Consensus 89 ~~~v~~i~~~~-dg~l~v~-~~~g-l~~~d~~~g~~-~~~~~~~~~~~~~~~~~i~~d~~G~-l~v~~~~~~~~~~~~~l 163 (326)
T 2ghs_A 89 PFMGSALAKIS-DSKQLIA-SDDG-LFLRDTATGVL-TLHAELESDLPGNRSNDGRMHPSGA-LWIGTMGRKAETGAGSI 163 (326)
T ss_dssp SSCEEEEEEEE-TTEEEEE-ETTE-EEEEETTTCCE-EEEECSSTTCTTEEEEEEEECTTSC-EEEEEEETTCCTTCEEE
T ss_pred CCcceEEEEeC-CCeEEEE-ECCC-EEEEECCCCcE-EEEeeCCCCCCCCCCCCEEECCCCC-EEEEeCCCcCCCCceEE
Confidence 34678899999 4656554 4444 89999874321 1111111 11 23589999999998 4554432 2456
Q ss_pred EEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcC--CC-CCCCCCCCCCCCCCceEEEecCccc
Q psy4571 175 ALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLS--KI-GEEQSTEDAEDGPPELLFIHGGHTA 251 (437)
Q Consensus 175 ~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~--~~-~~~~~~~~~~~~~~~~~~~~~~h~~ 251 (437)
..++ +++ ...+..+......++|+|+++.++++.+.++.|.+||+. ++ .... .+.+..+.....
T Consensus 164 ~~~~--~g~--~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~---------~~~~~~~~~~~~ 230 (326)
T 2ghs_A 164 YHVA--KGK--VTKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGK---------AEVFIDSTGIKG 230 (326)
T ss_dssp EEEE--TTE--EEEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSC---------CEEEEECTTSSS
T ss_pred EEEe--CCc--EEEeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccC---------ceEEEECCCCCC
Confidence 6666 333 233333334578999999998666666678899999986 33 2111 122223333445
Q ss_pred cEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeec-CCCCcccccC
Q psy4571 252 KISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTAS-PTASSTASES 315 (437)
Q Consensus 252 ~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s-~~g~~l~s~s 315 (437)
....+++.++|. +.++...++.|..||. +++....+.. ....+..++|+ |++..|..++
T Consensus 231 ~p~gi~~d~~G~-lwva~~~~~~v~~~d~-~g~~~~~i~~---~~~~~~~~af~g~d~~~L~vt~ 290 (326)
T 2ghs_A 231 GMDGSVCDAEGH-IWNARWGEGAVDRYDT-DGNHIARYEV---PGKQTTCPAFIGPDASRLLVTS 290 (326)
T ss_dssp EEEEEEECTTSC-EEEEEETTTEEEEECT-TCCEEEEEEC---SCSBEEEEEEESTTSCEEEEEE
T ss_pred CCCeeEECCCCC-EEEEEeCCCEEEEECC-CCCEEEEEEC---CCCCcEEEEEecCCCCEEEEEe
Confidence 678899999998 6766667789999998 5655555543 23346677887 8887665443
No 208
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.25 E-value=1.3e-09 Score=111.14 Aligned_cols=188 Identities=10% Similarity=0.074 Sum_probs=117.3
Q ss_pred ceEEeeCCCCCEEEEEECCC-------------cEEEEEcCCCCCC-CCeeeecc-CCCCeEEEEEeCCCCcEEEEEeCC
Q psy4571 107 QDVAWHLLHESLFGSVADDQ-------------KLMIWDTRSHNVS-KPSHTVDA-HTAEVNCLSFNPYSEYILATGSAD 171 (437)
Q Consensus 107 ~~~~~sp~~~~~l~~~~~dg-------------~v~vwd~~~~~~~-~~~~~~~~-h~~~v~~l~~~~~~~~~l~sgs~d 171 (437)
..++|+ + ++.|+.++.+. .|++|++.+.... ..+..... |......+.|+|||++++++.+.+
T Consensus 178 ~~~~Ws-D-g~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~ 255 (693)
T 3iuj_A 178 SGISWL-G-NEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANS 255 (693)
T ss_dssp CCCEEE-T-TTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESS
T ss_pred ccEEEe-C-CCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccC
Confidence 577899 5 45555666553 3999998754211 12222233 445678899999999866666543
Q ss_pred ---CeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCC---CeEEEEEcCCCCCCCCCCCCCCCCCceEEE
Q psy4571 172 ---KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTD---RRLHVWDLSKIGEEQSTEDAEDGPPELLFI 245 (437)
Q Consensus 172 ---g~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~d---g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~ 245 (437)
..|.++|+.++......+..+....... ++++|..+++....+ +.|..+|+.++.... ...
T Consensus 256 ~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~------------~~~ 322 (693)
T 3iuj_A 256 TSGNRLYVKDLSQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAH------------WRD 322 (693)
T ss_dssp SSCCEEEEEETTSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGG------------CEE
T ss_pred CCCcEEEEEECCCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccc------------cEE
Confidence 5899999987653355666666666555 667777666676554 579999998753211 122
Q ss_pred ecCccccEEEEEEccCCCeEEEEEeCCC--eEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCccccc
Q psy4571 246 HGGHTAKISDFSWNPNEPWVICSVSEDN--IMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASE 314 (437)
Q Consensus 246 ~~~h~~~v~~l~~~p~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~ 314 (437)
+..|...+. .|+++++.++++...++ .|++||+..+ ....+... .......+.+++++..++..
T Consensus 323 l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g~-~~~~l~~p--~~~~~~~~~~~~d~~~l~~~ 388 (693)
T 3iuj_A 323 LIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEGK-RVREVALP--GLGSVSGFNGKHDDPALYFG 388 (693)
T ss_dssp EECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTSC-EEEEECCS--SSSEEEECCCCTTCSCEEEE
T ss_pred EecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCCC-eeEEeecC--CCceEEeeecCCCCCEEEEE
Confidence 344544444 88999996666666665 6889998744 33333221 11223344667788766544
No 209
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.20 E-value=4.4e-08 Score=88.53 Aligned_cols=186 Identities=5% Similarity=-0.025 Sum_probs=124.6
Q ss_pred CCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCe-eeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCC
Q psy4571 104 LSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPS-HTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNL 182 (437)
Q Consensus 104 ~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~-~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~ 182 (437)
..+.++++.+ ++.++++...++.|..+|.. + +.. ..+......+.++++.+++. ++++...++.|..+|. ++
T Consensus 104 ~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~-g---~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~i~~~~~-~g 176 (300)
T 2qc5_A 104 SGPYGITEGL-NGDIWFTQLNGDRIGKLTAD-G---TIYEYDLPNKGSYPAFITLGSDNA-LWFTENQNNSIGRITN-TG 176 (300)
T ss_dssp CCEEEEEECS-TTCEEEEETTTTEEEEECTT-S---CEEEEECSSTTCCEEEEEECTTSS-EEEEETTTTEEEEECT-TC
T ss_pred CCCccceECC-CCCEEEEccCCCeEEEECCC-C---CEEEccCCCCCCCceeEEECCCCC-EEEEecCCCeEEEECC-CC
Confidence 4578899998 56777776667889999876 2 211 12223445789999999988 5776666889999998 43
Q ss_pred ceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCC
Q psy4571 183 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNE 262 (437)
Q Consensus 183 ~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~ 262 (437)
+........+...+..+++.++|. ++++....+.|.+||.. +... ......+...+.++++.++|
T Consensus 177 ~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~i~~~~~~-g~~~-------------~~~~~~~~~~~~~i~~d~~g 241 (300)
T 2qc5_A 177 KLEEYPLPTNAAAPVGITSGNDGA-LWFVEIMGNKIGRITTT-GEIS-------------EYDIPTPNARPHAITAGKNS 241 (300)
T ss_dssp CEEEEECSSTTCCEEEEEECTTSS-EEEEETTTTEEEEECTT-CCEE-------------EEECSSTTCCEEEEEECSTT
T ss_pred cEEEeeCCCCCCCcceEEECCCCC-EEEEccCCCEEEEEcCC-CcEE-------------EEECCCCCCCceEEEECCCC
Confidence 432222223445689999999986 66666667789999983 2211 11122344568899999999
Q ss_pred CeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccC
Q psy4571 263 PWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASES 315 (437)
Q Consensus 263 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s 315 (437)
. +.++...++.|..+|.. ++ ...+.... ....+..++++++|.++++..
T Consensus 242 ~-l~v~~~~~~~i~~~~~~-g~-~~~~~~~~-~~~~~~~i~~~~~g~l~v~~~ 290 (300)
T 2qc5_A 242 E-IWFTEWGANQIGRITND-NT-IQEYQLQT-ENAEPHGITFGKDGSVWFALK 290 (300)
T ss_dssp C-EEEEETTTTEEEEECTT-SC-EEEEECCS-TTCCCCCEEECTTSCEEEECS
T ss_pred C-EEEeccCCCeEEEECCC-Cc-EEEEECCc-cCCccceeEeCCCCCEEEEcc
Confidence 8 77777678999999983 42 23332221 223456678889998777665
No 210
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.20 E-value=2.4e-09 Score=98.80 Aligned_cols=217 Identities=8% Similarity=-0.074 Sum_probs=137.2
Q ss_pred ceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceee
Q psy4571 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKL 186 (437)
Q Consensus 107 ~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~ 186 (437)
...+|+|+++.++++...++.|..||..++ + ...+. ....+.+++|+|+|.. +++ +.+ .|.+||.++++.
T Consensus 52 egp~~~~~~~~l~~~d~~~~~i~~~d~~~~---~-~~~~~-~~~~v~~i~~~~dg~l-~v~-~~~-gl~~~d~~~g~~-- 121 (326)
T 2ghs_A 52 EGPTFDPASGTAWWFNILERELHELHLASG---R-KTVHA-LPFMGSALAKISDSKQ-LIA-SDD-GLFLRDTATGVL-- 121 (326)
T ss_dssp EEEEEETTTTEEEEEEGGGTEEEEEETTTT---E-EEEEE-CSSCEEEEEEEETTEE-EEE-ETT-EEEEEETTTCCE--
T ss_pred cCCeEeCCCCEEEEEECCCCEEEEEECCCC---c-EEEEE-CCCcceEEEEeCCCeE-EEE-ECC-CEEEEECCCCcE--
Confidence 578899966777777778899999998732 2 22222 3467999999999873 544 444 499999987653
Q ss_pred eEeccC-----CCceEEEEEcCCCCcEEEEEeC------CCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEE
Q psy4571 187 HSFESH-----KDEIFQVQWSPHNETILASSGT------DRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISD 255 (437)
Q Consensus 187 ~~~~~h-----~~~v~~v~~~p~~~~~l~sg~~------dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 255 (437)
..+... ...+..++++|+|+ ++++... .+.|..++ .++. ..+..+......
T Consensus 122 ~~~~~~~~~~~~~~~~~i~~d~~G~-l~v~~~~~~~~~~~~~l~~~~--~g~~---------------~~~~~~~~~~~~ 183 (326)
T 2ghs_A 122 TLHAELESDLPGNRSNDGRMHPSGA-LWIGTMGRKAETGAGSIYHVA--KGKV---------------TKLFADISIPNS 183 (326)
T ss_dssp EEEECSSTTCTTEEEEEEEECTTSC-EEEEEEETTCCTTCEEEEEEE--TTEE---------------EEEEEEESSEEE
T ss_pred EEEeeCCCCCCCCCCCCEEECCCCC-EEEEeCCCcCCCCceEEEEEe--CCcE---------------EEeeCCCcccCC
Confidence 222211 23588999999998 4554432 24455555 2211 111122335678
Q ss_pred EEEccCCCeEEEEEeCCCeEEEEeCC--CC-CCc--eeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccc
Q psy4571 256 FSWNPNEPWVICSVSEDNIMQEYCDS--TD-SDT--KTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQG 330 (437)
Q Consensus 256 l~~~p~~~~~l~s~~~dg~i~iwd~~--~~-~~~--~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~ 330 (437)
++|+|+++.++++.+.++.|.+||+. ++ ... +.+.........+..++++++|.++++...++.
T Consensus 184 i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~----------- 252 (326)
T 2ghs_A 184 ICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGA----------- 252 (326)
T ss_dssp EEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTE-----------
T ss_pred eEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCE-----------
Confidence 99999998666676778999999986 55 322 122111111223345678888887776544444
Q ss_pred cccccchhhhhhhhhcCCCccccccCCC-CCCcc
Q psy4571 331 LVLFDILVCEEQRQLLGTEEESSDRHSS-DNDTE 363 (437)
Q Consensus 331 i~~wd~~~~~~~~~~~~h~~~~~~~~~~-~~~~~ 363 (437)
|..||. +++.+..+..+...+..+.+. +++..
T Consensus 253 v~~~d~-~g~~~~~i~~~~~~~~~~af~g~d~~~ 285 (326)
T 2ghs_A 253 VDRYDT-DGNHIARYEVPGKQTTCPAFIGPDASR 285 (326)
T ss_dssp EEEECT-TCCEEEEEECSCSBEEEEEEESTTSCE
T ss_pred EEEECC-CCCEEEEEECCCCCcEEEEEecCCCCE
Confidence 677887 566666666665567777776 66653
No 211
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.14 E-value=6.3e-09 Score=96.82 Aligned_cols=269 Identities=11% Similarity=0.008 Sum_probs=165.4
Q ss_pred CCcceEEEeec-----cCceEeeecCCCcee---------EEEecCCCCeEEEec-----------CceEEEEEeeecc-
Q psy4571 45 PFDDAVEERVI-----NEEYKIWKKNTPFLY---------DLVVNNYVANISCIL-----------NISILFFEIIFTQ- 98 (437)
Q Consensus 45 ~~~~~l~tgs~-----d~~v~iw~~~~~~~~---------~~~~~~~~~~i~~~~-----------~~~i~~~~~~~~~- 98 (437)
|++..++.... ++.|.+.|..+..+. .+.+++++..+.... ++.|.+||....+
T Consensus 42 pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v 121 (386)
T 3sjl_D 42 PDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLPNPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLP 121 (386)
T ss_dssp CCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSCEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCE
T ss_pred CCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCCcEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeE
Confidence 66666555543 457777775443322 366677777663332 4679999865433
Q ss_pred --ccccC--------CCcceEEeeCCCCCEEEEEEC--CCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEE
Q psy4571 99 --NFPFP--------LSRQDVAWHLLHESLFGSVAD--DQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166 (437)
Q Consensus 99 --~~~~~--------~~v~~~~~sp~~~~~l~~~~~--dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~ 166 (437)
.++.+ .....++|+| +++++.++.. ++.|.++|+. ..+.+..+.-. + |....|.+...++
T Consensus 122 ~~~I~v~~g~r~~~g~~P~~~a~sp-DGk~lyVan~~~~~~VsVID~~---t~~vv~tI~v~-g---~~~~~P~g~~~~~ 193 (386)
T 3sjl_D 122 TADIELPDAPRFLVGTYPWMTSLTP-DGKTLLFYQFSPAPAVGVVDLE---GKAFKRMLDVP-D---CYHIFPTAPDTFF 193 (386)
T ss_dssp EEEEEETTCCCCCBSCCGGGEEECT-TSSEEEEEECSSSCEEEEEETT---TTEEEEEEECC-S---EEEEEEEETTEEE
T ss_pred EEEEECCCccccccCCCCceEEEcC-CCCEEEEEEcCCCCeEEEEECC---CCcEEEEEECC-C---cceeecCCCceeE
Confidence 22222 2577899999 5666666653 6899999999 45566665321 1 1222354544578
Q ss_pred EEeCCCeEEEEeCCC-CceeeeEeccC----CCceE-EEEEc-CCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCC
Q psy4571 167 TGSADKTVALWDLRN-LKLKLHSFESH----KDEIF-QVQWS-PHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGP 239 (437)
Q Consensus 167 sgs~dg~i~lwd~~~-~~~~~~~~~~h----~~~v~-~v~~~-p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~ 239 (437)
+.+.||.+.+.++.+ ++. ......+ ..++. ...|. ++|+ +++ .+.+|.|.+.|+.+......
T Consensus 194 ~~~~DG~~~~v~~~~~g~v-~~~~~~~~~~~~~~~~~~~~~~~~dG~-~~~-vs~~g~V~v~d~~~~~~~v~-------- 262 (386)
T 3sjl_D 194 MHCRDGSLAKVAFGTEGTP-EITHTEVFHPEDEFLINHPAYSQKAGR-LVW-PTYTGKIHQIDLSSGDAKFL-------- 262 (386)
T ss_dssp EEETTSCEEEEECCSSSCC-EEEECCCCSCTTSCBCSCCEEETTTTE-EEE-EBTTSEEEEEECTTSSCEEC--------
T ss_pred EECCCCCEEEEECCCCCeE-EEeecceeccccccccccceeEcCCCc-EEE-EeCCCEEEEEECCCCcceee--------
Confidence 889999999999986 332 2211111 12221 23554 6775 333 55689999999976542111
Q ss_pred CceEEEec------C-ccccEEEEEEccCCCeEEEEEeC---------CCeEEEEeCCCCCCceeeeeeecccCCceeee
Q psy4571 240 PELLFIHG------G-HTAKISDFSWNPNEPWVICSVSE---------DNIMQEYCDSTDSDTKTMRLDSIRSNGGISST 303 (437)
Q Consensus 240 ~~~~~~~~------~-h~~~v~~l~~~p~~~~~l~s~~~---------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 303 (437)
..+..+. + .......++++|+++.++++... .+.|.+.|+.+++.+..+.... ....++
T Consensus 263 -~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~----~~~~la 337 (386)
T 3sjl_D 263 -PAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGH----EIDSIN 337 (386)
T ss_dssp -CCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE----EECEEE
T ss_pred -cceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCC----CcceEE
Confidence 0000000 0 11222347778999866665432 2579999999999999888642 456789
Q ss_pred ecCCCC-cccc-cCCCCcccccccccccccccccchhhhhhhhhcCC
Q psy4571 304 ASPTAS-STAS-ESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGT 348 (437)
Q Consensus 304 ~s~~g~-~l~s-~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h 348 (437)
+++|++ .|++ ...++. +.++|..+++.++++..-
T Consensus 338 vs~D~~~~ly~tn~~~~~-----------VsViD~~t~k~~~~i~~~ 373 (386)
T 3sjl_D 338 VSQDEKPLLYALSTGDKT-----------LYIHDAESGEELRSVNQL 373 (386)
T ss_dssp ECSSSSCEEEEEETTTTE-----------EEEEETTTCCEEEEECCC
T ss_pred ECCCCCeEEEEEcCCCCe-----------EEEEECCCCcEEEEecCC
Confidence 999997 4544 455666 789999999988877443
No 212
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.14 E-value=1.7e-09 Score=102.89 Aligned_cols=209 Identities=8% Similarity=-0.039 Sum_probs=134.0
Q ss_pred CcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCC--eEEEEeCCCC
Q psy4571 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADK--TVALWDLRNL 182 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg--~i~lwd~~~~ 182 (437)
....++|+| ++.++++...++.|++||+.+ ......... ..... ++|+|++.. |+++..++ .|.+++....
T Consensus 132 ~P~~la~d~-~g~lyv~d~~~~~I~~id~~~---g~~~~~~~~-~~~~~-ia~~~~g~~-l~~~d~~~~~~I~~~d~~~~ 204 (409)
T 3hrp_A 132 YMWGIAAVG-NNTVLAYQRDDPRVRLISVDD---NKVTTVHPG-FKGGK-PAVTKDKQR-VYSIGWEGTHTVYVYMKASG 204 (409)
T ss_dssp CEEEEEECS-TTEEEEEETTTTEEEEEETTT---TEEEEEEET-CCBCB-CEECTTSSE-EEEEBSSTTCEEEEEEGGGT
T ss_pred CceEEEEeC-CCCEEEEecCCCcEEEEECCC---CEEEEeecc-CCCCc-eeEecCCCc-EEEEecCCCceEEEEEcCCC
Confidence 567899998 567777777779999999973 222222222 23334 999999995 77777765 7999988764
Q ss_pred ceeeeEe----ccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEE--ecCcccc--EE
Q psy4571 183 KLKLHSF----ESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFI--HGGHTAK--IS 254 (437)
Q Consensus 183 ~~~~~~~----~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~--~~~h~~~--v~ 254 (437)
.. ...+ ......+.+++++|++..+++ +..++.|+.||..+..... +.. ..++... ..
T Consensus 205 ~~-~~~~g~~~~~~~~~p~~iav~p~~g~lyv-~d~~~~I~~~d~~~~~~~~------------~~~~~~~g~~~~~P~~ 270 (409)
T 3hrp_A 205 WA-PTRIGQLGSTFSGKIGAVALDETEEWLYF-VDSNKNFGRFNVKTQEVTL------------IKQLELSGSLGTNPGP 270 (409)
T ss_dssp TC-EEEEEECCTTSCSCCCBCEECTTSSEEEE-ECTTCEEEEEETTTCCEEE------------EEECCCCSCCCCSSCC
T ss_pred ce-eEEeeeccchhcCCcEEEEEeCCCCeEEE-EECCCcEEEEECCCCCEEE------------EecccccCCCCCCccc
Confidence 43 2222 214466789999995554454 6778899999987653110 000 1111111 13
Q ss_pred EEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeee------------cccCCceeeeecCCCCcccccC-CCCccc
Q psy4571 255 DFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDS------------IRSNGGISSTASPTASSTASES-PTPTNS 321 (437)
Q Consensus 255 ~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~------------~~~~~~~~~~~s~~g~~l~s~s-~d~~~~ 321 (437)
.++|+|++..++++-..++.|+.|+.... ...+.... .....+..++++|+|.++++.+ .++.
T Consensus 271 ~ia~~p~~g~lyv~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~-- 346 (409)
T 3hrp_A 271 YLIYYFVDSNFYMSDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYC-- 346 (409)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCE--
T ss_pred cEEEeCCCCEEEEEeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCE--
Confidence 89999976658888888999999997643 22222110 0012355678999999777776 6666
Q ss_pred ccccccccccccccchhhhhhhhhcCC
Q psy4571 322 VHEKNYWQGLVLFDILVCEEQRQLLGT 348 (437)
Q Consensus 322 ~~~~~~~~~i~~wd~~~~~~~~~~~~h 348 (437)
|+.||..+|+. ..+.++
T Consensus 347 ---------I~~~~~~~G~v-~~~~g~ 363 (409)
T 3hrp_A 347 ---------LRKLDILDGYV-STVAGQ 363 (409)
T ss_dssp ---------EEEEETTTTEE-EEEEEC
T ss_pred ---------EEEEECCCCEE-EEEeCC
Confidence 78888766653 444443
No 213
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.06 E-value=2.1e-07 Score=87.22 Aligned_cols=232 Identities=8% Similarity=-0.052 Sum_probs=147.2
Q ss_pred EEEeeCCCcceEEEee----------ccCceEeeecCCCce------------------eEEEecCCCCeEEEe--c-Cc
Q psy4571 39 RLCVAEPFDDAVEERV----------INEEYKIWKKNTPFL------------------YDLVVNNYVANISCI--L-NI 87 (437)
Q Consensus 39 ~~~~~~~~~~~l~tgs----------~d~~v~iw~~~~~~~------------------~~~~~~~~~~~i~~~--~-~~ 87 (437)
.++++ |+++.++... .++.|.++|..+..+ ..+.+++++..+.+. . ++
T Consensus 70 ~i~~s-pDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~ 148 (373)
T 2mad_H 70 NPVAA-HSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGP 148 (373)
T ss_pred CeEEC-CCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCC
Confidence 68899 9999888875 367899999655332 245677888777543 2 46
Q ss_pred eEEEEEeeecccccc-CCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCee--eeccCCCC-eEEEEEeCCCCc
Q psy4571 88 SILFFEIIFTQNFPF-PLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSH--TVDAHTAE-VNCLSFNPYSEY 163 (437)
Q Consensus 88 ~i~~~~~~~~~~~~~-~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~--~~~~h~~~-v~~l~~~~~~~~ 163 (437)
.|.++| ...+.... -..-.++.+.|.+...+++.+.||.+.++|. ++....... .......+ .....+.+++..
T Consensus 149 ~v~viD-~t~~~~~~~i~~~~~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 226 (373)
T 2mad_H 149 AVGLVV-QGGSSDDQLLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGR 226 (373)
T ss_pred eEEEEE-CCCCEEeEEcCCCceEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCE
Confidence 799999 76543322 1112356677766677888889999999999 442211110 00011122 233556777665
Q ss_pred EEEEEeCCCeEEEEeCCCCcee-eeEecc----------CCCceEEEEEcCCCCcEEEEEe---------CCCeEEEEEc
Q psy4571 164 ILATGSADKTVALWDLRNLKLK-LHSFES----------HKDEIFQVQWSPHNETILASSG---------TDRRLHVWDL 223 (437)
Q Consensus 164 ~l~sgs~dg~i~lwd~~~~~~~-~~~~~~----------h~~~v~~v~~~p~~~~~l~sg~---------~dg~i~vwd~ 223 (437)
++++ +.++.+.+.|+...... ...+.. .......++++|+++.++++.. .++.|.++|+
T Consensus 227 ~~~~-~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~ 305 (373)
T 2mad_H 227 IVWP-VYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTG 305 (373)
T ss_pred EEEE-cCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEEC
Confidence 3444 47889999999754321 112210 1233455889999987555543 2357999999
Q ss_pred CCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEe-CCCeEEEEeCCCCCCceee
Q psy4571 224 SKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVS-EDNIMQEYCDSTDSDTKTM 289 (437)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~ 289 (437)
.+.+.... +.. .....+++|+|||+.+++++. .++.|.++|+.+++.+..+
T Consensus 306 ~t~~vv~~--------------i~~-g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~i 357 (373)
T 2mad_H 306 LVGQTSSQ--------------ISL-GHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQST 357 (373)
T ss_pred CCCEEEEE--------------EEC-CCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEeee
Confidence 88644332 322 235789999999995555555 6899999999999877663
No 214
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.05 E-value=2.4e-09 Score=110.21 Aligned_cols=227 Identities=11% Similarity=-0.010 Sum_probs=131.4
Q ss_pred CcceEEeeCCCCCEEEEEECC-C----cEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCe------
Q psy4571 105 SRQDVAWHLLHESLFGSVADD-Q----KLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKT------ 173 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~~d-g----~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~------ 173 (437)
.+..++||| ++++||.+..+ | .|++||+.++ +.+.. ..+...+..++|+|| +. |+.++.|+.
T Consensus 164 ~~~~~~~SP-DG~~la~~~~~~G~e~~~i~v~dl~tg---~~~~~-~~~~~~~~~~~wspD-~~-l~~~~~~~~~~~~~~ 236 (741)
T 1yr2_A 164 ALDAWAASD-DGRLLAYSVQDGGSDWRTVKFVGVADG---KPLAD-ELKWVKFSGLAWLGN-DA-LLYSRFAEPKEGQAF 236 (741)
T ss_dssp EEEEEEECT-TSSEEEEEEEETTCSEEEEEEEETTTC---CEEEE-EEEEEESCCCEESTT-SE-EEEEECCCC------
T ss_pred EEEeEEECC-CCCEEEEEEcCCCCceEEEEEEECCCC---CCCCc-cCCCceeccEEEECC-CE-EEEEEecCccccccc
Confidence 467899999 56777665543 3 5999999854 33322 111222357899999 86 666665543
Q ss_pred --------EEEEeCCCCce---eeeEeccCCCceEEEEEcCCCCcEEEEEeC----CCeEEEEEcCCCCCCCCCCCCCCC
Q psy4571 174 --------VALWDLRNLKL---KLHSFESHKDEIFQVQWSPHNETILASSGT----DRRLHVWDLSKIGEEQSTEDAEDG 238 (437)
Q Consensus 174 --------i~lwd~~~~~~---~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~----dg~i~vwd~~~~~~~~~~~~~~~~ 238 (437)
|.+|++.++.. .+.....+...+..+.|+|+|+++++++.. ...|++||+.++...
T Consensus 237 ~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~--------- 307 (741)
T 1yr2_A 237 QALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIG--------- 307 (741)
T ss_dssp --CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEEC---------
T ss_pred ccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCc---------
Confidence 89999987552 122222333458899999999975544432 347999999764111
Q ss_pred CCceEEEecCccccEEEEEEccCCCeEEEEEeC---CCeEEEEeCCCCC-CceeeeeeecccCCce-eeeecCCCCcccc
Q psy4571 239 PPELLFIHGGHTAKISDFSWNPNEPWVICSVSE---DNIMQEYCDSTDS-DTKTMRLDSIRSNGGI-SSTASPTASSTAS 313 (437)
Q Consensus 239 ~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~---dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~-~~~~s~~g~~l~s 313 (437)
....+..+...+... ++|+|+.+++.... ++.|.+||+.++. ....+.. +....+ .++++ ++.++++
T Consensus 308 ---~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~---~~~~~l~~~~~~-~~~lv~~ 379 (741)
T 1yr2_A 308 ---PVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVP---ESKDNLESVGIA-GNRLFAS 379 (741)
T ss_dssp ---CCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEEC---CCSSEEEEEEEE-BTEEEEE
T ss_pred ---ccEEecCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEec---CCCCeEEEEEEE-CCEEEEE
Confidence 011122333333444 34888855544432 4569999998753 2222221 122222 34555 5567777
Q ss_pred cCCCCcccccccccccccccccchhhhhhhhhcC-CCccccccCCCCCCcccc
Q psy4571 314 ESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLG-TEEESSDRHSSDNDTEDL 365 (437)
Q Consensus 314 ~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~-h~~~~~~~~~~~~~~~~~ 365 (437)
...++... +.++|. +|+..+.+.. +...+..+.+++++..+.
T Consensus 380 ~~~dg~~~---------l~~~~~-~g~~~~~l~~~~~~~v~~~~~s~d~~~l~ 422 (741)
T 1yr2_A 380 YIHDAKSQ---------VLAFDL-DGKPAGAVSLPGIGSASGLSGRPGDRHAY 422 (741)
T ss_dssp EEETTEEE---------EEEEET-TSCEEEECBCSSSCEEEEEECCBTCSCEE
T ss_pred EEECCEEE---------EEEEeC-CCCceeeccCCCCeEEEEeecCCCCCEEE
Confidence 77776632 333343 3555555554 345567777888887554
No 215
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.05 E-value=1.3e-08 Score=96.37 Aligned_cols=234 Identities=14% Similarity=0.048 Sum_probs=136.4
Q ss_pred ceEEEEEeeecc---ccccCCCcceEEeeCCCCCEEEEEE---------CCCcEEEEEcCCCCCCCCeeeeccC------
Q psy4571 87 ISILFFEIIFTQ---NFPFPLSRQDVAWHLLHESLFGSVA---------DDQKLMIWDTRSHNVSKPSHTVDAH------ 148 (437)
Q Consensus 87 ~~i~~~~~~~~~---~~~~~~~v~~~~~sp~~~~~l~~~~---------~dg~v~vwd~~~~~~~~~~~~~~~h------ 148 (437)
+.|.+.|....+ .++..... .++++|++..++++-. .++.|.++|.. ..+.+..+.-.
T Consensus 99 ~~VsVID~~t~~vv~~I~vG~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~---t~~vv~~I~v~g~~r~~ 174 (426)
T 3c75_H 99 TQQFVIDGSTGRILGMTDGGFLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPV---TFLPIADIELPDAPRFL 174 (426)
T ss_dssp EEEEEEETTTTEEEEEEEECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTT---TCCEEEEEEETTCCCCC
T ss_pred CeEEEEECCCCEEEEEEECCCCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECC---CCcEEEEEECCCccccc
Confidence 456666643222 23333334 8999995444444432 46789999998 45555554311
Q ss_pred -CCCeEEEEEeCCCCcEEEEEeC--CCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCC
Q psy4571 149 -TAEVNCLSFNPYSEYILATGSA--DKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 225 (437)
Q Consensus 149 -~~~v~~l~~~~~~~~~l~sgs~--dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~ 225 (437)
......+.++|||++ ++++.. ++.|.+.|+.+.+. +..+..- + +....|+++..+++.+.||++.+.+...
T Consensus 175 ~g~~P~~~~~spDGk~-lyV~n~~~~~~VsVID~~t~kv-v~~I~v~-g---~~~~~p~g~~~~v~~~~dG~~~~V~~~~ 248 (426)
T 3c75_H 175 VGTYQWMNALTPDNKN-LLFYQFSPAPAVGVVDLEGKTF-DRMLDVP-D---CYHIFPASPTVFYMNCRDGSLARVDFAD 248 (426)
T ss_dssp BSCCGGGSEECTTSSE-EEEEECSSSCEEEEEETTTTEE-EEEEECC-S---EEEEEEEETTEEEEEETTSSEEEEECCT
T ss_pred cCCCcceEEEcCCCCE-EEEEecCCCCeEEEEECCCCeE-EEEEEcC-C---ceeeccCCCcEEEEEcCCCCEEEEECCC
Confidence 123457899999997 555553 68899999999665 5555421 1 1223344433444555555555555532
Q ss_pred CCCCC------CCCC------C--CCCCCce--------EEEecC--c---------------------cccEEEEEEcc
Q psy4571 226 IGEEQ------STED------A--EDGPPEL--------LFIHGG--H---------------------TAKISDFSWNP 260 (437)
Q Consensus 226 ~~~~~------~~~~------~--~~~~~~~--------~~~~~~--h---------------------~~~v~~l~~~p 260 (437)
++... .... . ....... +..... . ......++++|
T Consensus 249 ~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~ 328 (426)
T 3c75_H 249 GETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHR 328 (426)
T ss_dssp TCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEG
T ss_pred CcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcC
Confidence 22110 0000 0 0000000 000000 0 00111268899
Q ss_pred CCCeEEEEEe---------CCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCC-cccccC-CCCccccccccccc
Q psy4571 261 NEPWVICSVS---------EDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTAS-STASES-PTPTNSVHEKNYWQ 329 (437)
Q Consensus 261 ~~~~~l~s~~---------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~-~l~s~s-~d~~~~~~~~~~~~ 329 (437)
++++++++.. .++.|.+.|..+.+.+..+.... .+..++++|||+ .+++.. .++.
T Consensus 329 dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~----~P~gia~spDg~~~lyv~n~~s~~---------- 394 (426)
T 3c75_H 329 QSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGH----EIDSINVSQDAEPLLYALSAGTQT---------- 394 (426)
T ss_dssp GGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE----EECEEEECCSSSCEEEEEETTTTE----------
T ss_pred CCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCC----CcCeEEEccCCCEEEEEEcCCCCe----------
Confidence 9886676653 24579999999999998887633 466789999999 777665 4666
Q ss_pred ccccccchhhhhhhhh
Q psy4571 330 GLVLFDILVCEEQRQL 345 (437)
Q Consensus 330 ~i~~wd~~~~~~~~~~ 345 (437)
+.++|..+++.++++
T Consensus 395 -VsVID~~t~kvv~tI 409 (426)
T 3c75_H 395 -LHIYDAATGEELRSV 409 (426)
T ss_dssp -EEEEETTTCCEEEEE
T ss_pred -EEEEECCCCCEEEEe
Confidence 899999999988876
No 216
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.05 E-value=3.3e-08 Score=92.01 Aligned_cols=241 Identities=10% Similarity=-0.016 Sum_probs=153.0
Q ss_pred EEeeCCCcceEEEee----------ccCceEeeecCCCceeE------------------EEecCCCCeEEEe--c-Cce
Q psy4571 40 LCVAEPFDDAVEERV----------INEEYKIWKKNTPFLYD------------------LVVNNYVANISCI--L-NIS 88 (437)
Q Consensus 40 ~~~~~~~~~~l~tgs----------~d~~v~iw~~~~~~~~~------------------~~~~~~~~~i~~~--~-~~~ 88 (437)
+.++ |+++.++.+. .++.|.+||..+..+.. +.+++++..+... . ++.
T Consensus 83 va~s-pDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~ 161 (386)
T 3sjl_D 83 PVVA-DDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPA 161 (386)
T ss_dssp EEEC-TTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCE
T ss_pred EEEC-CCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCe
Confidence 8888 9999887765 36789999977655443 4566677766433 2 578
Q ss_pred EEEEEeeeccc---cccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccC----CCCeE-EEEEe-C
Q psy4571 89 ILFFEIIFTQN---FPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAH----TAEVN-CLSFN-P 159 (437)
Q Consensus 89 i~~~~~~~~~~---~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h----~~~v~-~l~~~-~ 159 (437)
|.++|....+. ++.+. |....|.+...+++.+.||.+.+.++... .+.......+ ..++. ..+|. +
T Consensus 162 VsVID~~t~~vv~tI~v~g---~~~~~P~g~~~~~~~~~DG~~~~v~~~~~--g~v~~~~~~~~~~~~~~~~~~~~~~~~ 236 (386)
T 3sjl_D 162 VGVVDLEGKAFKRMLDVPD---CYHIFPTAPDTFFMHCRDGSLAKVAFGTE--GTPEITHTEVFHPEDEFLINHPAYSQK 236 (386)
T ss_dssp EEEEETTTTEEEEEEECCS---EEEEEEEETTEEEEEETTSCEEEEECCSS--SCCEEEECCCCSCTTSCBCSCCEEETT
T ss_pred EEEEECCCCcEEEEEECCC---cceeecCCCceeEEECCCCCEEEEECCCC--CeEEEeecceeccccccccccceeEcC
Confidence 99999765443 22222 23344656677888899999999998742 2222111111 12221 24665 5
Q ss_pred CCCcEEEEEeCCCeEEEEeCCCCce-eeeEec----------cCCCceEEEEEcCCCCcEEEEEeC---------CCeEE
Q psy4571 160 YSEYILATGSADKTVALWDLRNLKL-KLHSFE----------SHKDEIFQVQWSPHNETILASSGT---------DRRLH 219 (437)
Q Consensus 160 ~~~~~l~sgs~dg~i~lwd~~~~~~-~~~~~~----------~h~~~v~~v~~~p~~~~~l~sg~~---------dg~i~ 219 (437)
+|+ ++-.+.+|.|.+.|+.+... ....+. -..+....++++|+++.++++-.. .+.|.
T Consensus 237 dG~--~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~ 314 (386)
T 3sjl_D 237 AGR--LVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVV 314 (386)
T ss_dssp TTE--EEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEE
T ss_pred CCc--EEEEeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEE
Confidence 665 33466689999999976432 111111 012344567889999876655431 25799
Q ss_pred EEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCC-eEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCC
Q psy4571 220 VWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEP-WVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNG 298 (437)
Q Consensus 220 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 298 (437)
+.|+.+.+.... +.- ...+.+|+++||++ .++++...++.|.++|..+++.+.++... ..
T Consensus 315 viD~~t~kv~~~--------------i~v-g~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~----~~ 375 (386)
T 3sjl_D 315 VLDAKTGERLAK--------------FEM-GHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQL----GH 375 (386)
T ss_dssp EEETTTCCEEEE--------------EEE-EEEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCC----CS
T ss_pred EEECCCCeEEEE--------------EEC-CCCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCC----CC
Confidence 999998765433 211 23678999999996 45555667999999999999988888753 23
Q ss_pred ceeeeecCC
Q psy4571 299 GISSTASPT 307 (437)
Q Consensus 299 ~~~~~~s~~ 307 (437)
...+.+++|
T Consensus 376 p~~l~~s~d 384 (386)
T 3sjl_D 376 GPQVITTAD 384 (386)
T ss_dssp SCCEEEECC
T ss_pred CceeEECCc
Confidence 334555555
No 217
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.05 E-value=8.3e-09 Score=94.12 Aligned_cols=217 Identities=10% Similarity=0.032 Sum_probs=135.5
Q ss_pred CcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCce
Q psy4571 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKL 184 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~ 184 (437)
......|+|++..+++++..++.|..|+.. + . ...+..+...+..++++++|. ++++...++.|.+|+.+ ++.
T Consensus 46 ~~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g---~-~~~~~~~~~~~~gl~~d~dG~-l~v~~~~~~~v~~~~~~-g~~ 118 (305)
T 3dr2_A 46 WSEGPAWWEAQRTLVWSDLVGRRVLGWRED-G---T-VDVLLDATAFTNGNAVDAQQR-LVHCEHGRRAITRSDAD-GQA 118 (305)
T ss_dssp SEEEEEEEGGGTEEEEEETTTTEEEEEETT-S---C-EEEEEESCSCEEEEEECTTSC-EEEEETTTTEEEEECTT-SCE
T ss_pred CccCCeEeCCCCEEEEEECCCCEEEEEeCC-C---C-EEEEeCCCCccceeeECCCCC-EEEEECCCCEEEEECCC-CCE
Confidence 345789999544477788888999999874 2 2 344555667799999999998 56665566889999986 332
Q ss_pred eeeEeccC-----CCceEEEEEcCCCCcEEEE----EeC-------------CCeEEEEEcCCCCCCCCCCCCCCCCCce
Q psy4571 185 KLHSFESH-----KDEIFQVQWSPHNETILAS----SGT-------------DRRLHVWDLSKIGEEQSTEDAEDGPPEL 242 (437)
Q Consensus 185 ~~~~~~~h-----~~~v~~v~~~p~~~~~l~s----g~~-------------dg~i~vwd~~~~~~~~~~~~~~~~~~~~ 242 (437)
..+..+ ...+..+++.|+|+ ++++ |.. .+.|..+|..++.. ..
T Consensus 119 --~~~~~~~~~~~~~~~~~i~~d~dG~-l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~------------~~ 183 (305)
T 3dr2_A 119 --HLLVGRYAGKRLNSPNDLIVARDGA-IWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPL------------QR 183 (305)
T ss_dssp --EEEECEETTEECSCCCCEEECTTSC-EEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCC------------EE
T ss_pred --EEEEeccCCCccCCCCCEEECCCCC-EEEeCcCCCccccccccccccccCCCeEEEEcCCCCcE------------EE
Confidence 222111 13467899999998 5665 321 24577777654321 11
Q ss_pred EEEecCccccEEEEEEccCCCeEEEEEeC-----CCeEEEEeCCCCCCceeeee-eecccCCceeeeecCCCCcccccCC
Q psy4571 243 LFIHGGHTAKISDFSWNPNEPWVICSVSE-----DNIMQEYCDSTDSDTKTMRL-DSIRSNGGISSTASPTASSTASESP 316 (437)
Q Consensus 243 ~~~~~~h~~~v~~l~~~p~~~~~l~s~~~-----dg~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~s~~g~~l~s~s~ 316 (437)
.. .......++|+|+++.++++.+. ++.|.+|++..+. +..... .......+-.++++++|+++++. .
T Consensus 184 ---~~-~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~-~ 257 (305)
T 3dr2_A 184 ---MA-DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHFASVPDGLPDGFCVDRGGWLWSSS-G 257 (305)
T ss_dssp ---EE-EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE-EEEEEEEECCSSSCCCSEEECTTSCEEECC-S
T ss_pred ---Ee-cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC-ccCCeEEEECCCCCCCeEEECCCCCEEEec-C
Confidence 11 23456889999999955444443 2789999987654 211111 11112233456788888865554 3
Q ss_pred CCcccccccccccccccccchhhhhhhhhcCCCccccccCCCCCCcc
Q psy4571 317 TPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHSSDNDTE 363 (437)
Q Consensus 317 d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~~~~~~~~~ 363 (437)
++ |.+||. .|+.+..+.... .+..+.+.+++..
T Consensus 258 ~g------------v~~~~~-~g~~~~~~~~~~-~~~~~~f~~d~~~ 290 (305)
T 3dr2_A 258 TG------------VCVFDS-DGQLLGHIPTPG-TASNCTFDQAQQR 290 (305)
T ss_dssp SE------------EEEECT-TSCEEEEEECSS-CCCEEEECTTSCE
T ss_pred Cc------------EEEECC-CCCEEEEEECCC-ceeEEEEeCCCCE
Confidence 33 677877 566666665544 4666667777653
No 218
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.02 E-value=3.5e-09 Score=108.04 Aligned_cols=227 Identities=13% Similarity=0.082 Sum_probs=136.6
Q ss_pred CCcceEEeeCCCCCEEEE-EECC----CcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCC------
Q psy4571 104 LSRQDVAWHLLHESLFGS-VADD----QKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADK------ 172 (437)
Q Consensus 104 ~~v~~~~~sp~~~~~l~~-~~~d----g~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg------ 172 (437)
..+..++||| ++++||- .+.. ..|+++|+.++ +.+.. ..+......++|+ |++. |+.++.+.
T Consensus 129 ~~l~~~~~Sp-Dg~~lAy~~~~~G~~~~~i~v~dl~tg---~~~~~-~~~~~k~~~~~Ws-Dg~~-l~y~~~~~~~~~~~ 201 (693)
T 3iuj_A 129 TALDQLSFSR-DGRILAYSLSLAGSDWREIHLMDVESK---QPLET-PLKDVKFSGISWL-GNEG-FFYSSYDKPDGSEL 201 (693)
T ss_dssp CEEEEEEECT-TSSEEEEEEECSSCCEEEEEEEETTTC---SEEEE-EEEEEESCCCEEE-TTTE-EEEEESSCCC----
T ss_pred EEEEEEEECC-CCCEEEEEEecCCCceEEEEEEECCCC---CCCcc-ccCCceeccEEEe-CCCE-EEEEEecCcccccc
Confidence 4677889999 5666663 3323 47999999854 32221 1111112567899 9996 66666663
Q ss_pred -------eEEEEeCCCCce---eeeEecc-CCCceEEEEEcCCCCcEEEEEeCC---CeEEEEEcCCCCCCCCCCCCCCC
Q psy4571 173 -------TVALWDLRNLKL---KLHSFES-HKDEIFQVQWSPHNETILASSGTD---RRLHVWDLSKIGEEQSTEDAEDG 238 (437)
Q Consensus 173 -------~i~lwd~~~~~~---~~~~~~~-h~~~v~~v~~~p~~~~~l~sg~~d---g~i~vwd~~~~~~~~~~~~~~~~ 238 (437)
.|.+|++.+... .+..... |......+.|+|+|++++++.+.+ ..|+++|+.++...
T Consensus 202 ~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~--------- 272 (693)
T 3iuj_A 202 SARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAP--------- 272 (693)
T ss_dssp ---CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCC---------
T ss_pred cccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCc---------
Confidence 399999987543 1222233 445578899999999866666533 57999998765311
Q ss_pred CCceEEEecCccccEEEEEEccCCCeEEEEEeCC---CeEEEEeCCCCCC--ceeeeeeecccCCceeeeecCCCCcccc
Q psy4571 239 PPELLFIHGGHTAKISDFSWNPNEPWVICSVSED---NIMQEYCDSTDSD--TKTMRLDSIRSNGGISSTASPTASSTAS 313 (437)
Q Consensus 239 ~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~d---g~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~s~~g~~l~s 313 (437)
+..+..+....... ++++|..+++....+ +.|..+|+.++.. .+.+.. +..... .+++++..|+.
T Consensus 273 ----~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~---~~~~~~--~~s~~g~~lv~ 342 (693)
T 3iuj_A 273 ----LLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIP---ERQQVL--TVHSGSGYLFA 342 (693)
T ss_dssp ----CEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEEC---CCSSCE--EEEEETTEEEE
T ss_pred ----eEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEec---CCCCEE--EEEEECCEEEE
Confidence 12233444444444 677777676666554 6899999988754 233322 223333 89999988776
Q ss_pred cCCCCcccccccccccccccccchhhhhhhhhc-CCCccccccCCCCCCcccc
Q psy4571 314 ESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLL-GTEEESSDRHSSDNDTEDL 365 (437)
Q Consensus 314 ~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~-~h~~~~~~~~~~~~~~~~~ 365 (437)
...+.. ...+++||+..+. .+.+. .....+..+.+++++..+.
T Consensus 343 ~~~~~g--------~~~l~~~d~~g~~-~~~l~~p~~~~~~~~~~~~d~~~l~ 386 (693)
T 3iuj_A 343 EYMVDA--------TARVEQFDYEGKR-VREVALPGLGSVSGFNGKHDDPALY 386 (693)
T ss_dssp EEEETT--------EEEEEEECTTSCE-EEEECCSSSSEEEECCCCTTCSCEE
T ss_pred EEEECC--------eeEEEEEECCCCe-eEEeecCCCceEEeeecCCCCCEEE
Confidence 653321 1227788876443 33332 2333455666777766543
No 219
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.01 E-value=3.8e-11 Score=112.87 Aligned_cols=204 Identities=12% Similarity=-0.044 Sum_probs=108.5
Q ss_pred CCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCC
Q psy4571 115 HESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKD 194 (437)
Q Consensus 115 ~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~ 194 (437)
.+..+++++.||.|+.||.. .++.+..+.. +.+.+..+..++. ++++++.||.|..||.++++. +..+..+..
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~---tG~~~W~~~~--~~~~s~p~~~~g~-~~v~~s~dg~l~a~d~~tG~~-~w~~~~~~~ 80 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKR---TGSIKWTLKE--DPVLQVPTHVEEP-AFLPDPNDGSLYTLGSKNNEG-LTKLPFTIP 80 (369)
T ss_dssp CTTEEEEEETTSEEEEEETT---TCCEEEEEEC--CCSCCCC-----C-CEEECTTTCCEEEC-----CC-SEECSCCHH
T ss_pred eCCEEEEEcCCCEEEEEECC---CCCEEEEecC--CCceecceEcCCC-EEEEeCCCCEEEEEECCCCce-eeeeeccCc
Confidence 46788899999999999998 4566655554 4555555666676 478888999999999988665 434432211
Q ss_pred -ceE-EEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCC
Q psy4571 195 -EIF-QVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED 272 (437)
Q Consensus 195 -~v~-~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~d 272 (437)
.+. +..+. .+. .+++|+.|+.|+.||..+++.... +..+. ...++|++. .+++++.|
T Consensus 81 ~~~~~sp~~~-~~~-~v~~g~~dg~v~a~D~~tG~~~w~--------------~~~~~----~~~~~p~~~-~v~~~~~d 139 (369)
T 2hz6_A 81 ELVQASPCRS-SDG-ILYMGKKQDIWYVIDLLTGEKQQT--------------LSSAF----ADSLSPSTS-LLYLGRTE 139 (369)
T ss_dssp HHHTTCSCC-------CCCCEEEEEEEEECCC-----------------------------------------EEEEEEE
T ss_pred cccccCceEe-cCC-EEEEEeCCCEEEEEECCCCcEEEE--------------ecCCC----cccccccCC-EEEEEecC
Confidence 110 00111 233 367788899999999998865443 22222 234567776 67788999
Q ss_pred CeEEEEeCCCCCCceeeeeeecccCCceeeeecCCC---CcccccCCCCcccccccccccccccccchhhhhhhhhcCCC
Q psy4571 273 NIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTA---SSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTE 349 (437)
Q Consensus 273 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g---~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~ 349 (437)
+.|+.||.++++....+.... ....++++++ ..++.++.++. +..||..+|+.+-...-..
T Consensus 140 g~v~a~d~~tG~~~W~~~~~~-----~~~~~~~~~~~~~~~v~~~~~dg~-----------v~a~d~~tG~~~W~~~~~~ 203 (369)
T 2hz6_A 140 YTITMYDTKTRELRWNATYFD-----YAASLPEDDVDYKMSHFVSNGDGL-----------VVTVDSESGDVLWIQNYAS 203 (369)
T ss_dssp EEEECCCSSSSSCCCEEEEEE-----ECCBCCCCCTTCCCCEEEEETSCE-----------EEEECTTTCCEEEEEECSS
T ss_pred CEEEEEECCCCCEEEeEeccc-----ccCccccCCccccceEEEECCCCE-----------EEEEECCCCcEEEEecCCC
Confidence 999999999998877765422 1122333332 44556666776 6778887777654443222
Q ss_pred ccccccCCCCCCc
Q psy4571 350 EESSDRHSSDNDT 362 (437)
Q Consensus 350 ~~~~~~~~~~~~~ 362 (437)
..+....++++|.
T Consensus 204 pv~~~~~~~~dg~ 216 (369)
T 2hz6_A 204 PVVAFYVWQREGL 216 (369)
T ss_dssp CEEEEEECTTSSC
T ss_pred ceEEEEEecCCce
Confidence 2222233445553
No 220
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.98 E-value=8.8e-08 Score=88.89 Aligned_cols=249 Identities=10% Similarity=-0.025 Sum_probs=146.2
Q ss_pred ceeEEEEeeCCCcceEEEeec--cCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEee
Q psy4571 35 YRFYRLCVAEPFDDAVEERVI--NEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWH 112 (437)
Q Consensus 35 ~~v~~~~~~~~~~~~l~tgs~--d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~s 112 (437)
..+..++++ ++++++++... ++.+++|....+.+. .+ +.... .....-..+..++++
T Consensus 17 ~~p~~va~~-~~g~~~v~~~~~~~~~~~l~~~~~g~~~--~~-p~~~~-----------------~~~~~~~~p~gv~~d 75 (343)
T 2qe8_A 17 LAPGNITLT-PDGRLFLSLHQFYQPEMQVAELTQDGLI--PF-PPQSG-----------------NAIITFDTVLGIKSD 75 (343)
T ss_dssp SCEEEEEEC-TTSCEEEEECGGGCCSCSEEEEETTEEE--ES-CCCCS-----------------SCCCCCSCEEEEEEC
T ss_pred CCcceEEEC-CCCCEEEEeCCCCCCceEEEEECCCCee--cC-CCccc-----------------CcccceeEeeEEEEc
Confidence 457778888 88988888642 233666665433221 11 11000 000123478899999
Q ss_pred CCCCCEEEEEEC-----CCcEEEEEcCCCCCCCCeeeecc------CCCCeEEEEEeCCCCcEEEEEe---CCCeEEEEe
Q psy4571 113 LLHESLFGSVAD-----DQKLMIWDTRSHNVSKPSHTVDA------HTAEVNCLSFNPYSEYILATGS---ADKTVALWD 178 (437)
Q Consensus 113 p~~~~~l~~~~~-----dg~v~vwd~~~~~~~~~~~~~~~------h~~~v~~l~~~~~~~~~l~sgs---~dg~i~lwd 178 (437)
| ++.++++-.. ++.|.+||+.+ .+.+..+.. +...+..+++++++..++++.. .++.|.+||
T Consensus 76 ~-~g~L~v~D~g~~~~~~~~i~~~d~~t---g~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d 151 (343)
T 2qe8_A 76 G-NGIVWMLDNGNQSKSVPKLVAWDTLN---NQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVD 151 (343)
T ss_dssp S-SSEEEEEECHHHHTSCCEEEEEETTT---TEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEE
T ss_pred C-CCcEEEEcCCCCcCCCCeEEEEECCC---CeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEE
Confidence 9 4555554433 57899999984 333333322 2245689999987665566665 688999999
Q ss_pred CCCCceeeeEeccC-----------------------------CCceEEEEEcCCCCcEEEEEeCCC-eEEEEEcCCCCC
Q psy4571 179 LRNLKLKLHSFESH-----------------------------KDEIFQVQWSPHNETILASSGTDR-RLHVWDLSKIGE 228 (437)
Q Consensus 179 ~~~~~~~~~~~~~h-----------------------------~~~v~~v~~~p~~~~~l~sg~~dg-~i~vwd~~~~~~ 228 (437)
+.+++. ...+..| ...+..++|+|+++. |+.+..++ .+..++......
T Consensus 152 ~~~g~~-~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~-ly~~~~~~~~l~~~~~~~~~~ 229 (343)
T 2qe8_A 152 LQTGLA-ARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEW-LYLSPMHSTSMYRIKSADLSN 229 (343)
T ss_dssp TTTCCE-EEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCE-EEEEESSCSEEEEEEHHHHTC
T ss_pred CCCCCE-EEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCE-EEEEeCCCCeEEEEEHHHhcC
Confidence 987553 3333221 123688999999986 55555444 565555421110
Q ss_pred CCCCCCCCCCCCceE--EEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecC
Q psy4571 229 EQSTEDAEDGPPELL--FIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASP 306 (437)
Q Consensus 229 ~~~~~~~~~~~~~~~--~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~ 306 (437)
... ...+.. ....++......++++++|. ++++...++.|.+||..+++. ..+.. ......+..+++.+
T Consensus 230 ~~~------~~~~~~~~~~~~g~~g~pdgia~d~~G~-l~va~~~~~~V~~~d~~~G~~-~~~~~-~~~~~~p~~va~~~ 300 (343)
T 2qe8_A 230 LQL------TDAELGSKIERYSEKPICDGISIDKDHN-IYVGDLAHSAIGVITSADRAY-KLLVT-DEKLSWTDSFNFGS 300 (343)
T ss_dssp TTC------CHHHHHTTCEEEEECCSCSCEEECTTCC-EEEEEGGGTEEEEEETTTTEE-EEEEE-CGGGSCEEEEEECT
T ss_pred CCC------ChhhhhcceEecccCCCCceEEECCCCC-EEEEccCCCeEEEEECCCCCE-EEEEE-CCceecCCeeEECC
Confidence 000 000000 00113333456789999998 888888999999999855542 22221 11234466778999
Q ss_pred CCCcccccCCCCc
Q psy4571 307 TASSTASESPTPT 319 (437)
Q Consensus 307 ~g~~l~s~s~d~~ 319 (437)
+|+++++.+..+.
T Consensus 301 ~g~l~v~~~~~~~ 313 (343)
T 2qe8_A 301 DGYLYFDCNQLHH 313 (343)
T ss_dssp TSCEEEEECCGGG
T ss_pred CCcEEEEeCcccc
Confidence 9988887765544
No 221
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.98 E-value=1.6e-07 Score=83.75 Aligned_cols=224 Identities=6% Similarity=0.039 Sum_probs=137.6
Q ss_pred CcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCce
Q psy4571 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKL 184 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~ 184 (437)
.+..++|+|.++.++++-..++.|.++++... ...............++++|++.+++++-...+.|.+++++....
T Consensus 37 ~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~---~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~ 113 (267)
T 1npe_A 37 VIIGLAFDCVDKVVYWTDISEPSIGRASLHGG---EPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQR 113 (267)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEESSSC---CCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred cEEEEEEecCCCEEEEEECCCCEEEEEecCCC---CcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCE
Confidence 35689999965666666666789999998732 222222222346899999998776666666788999999875332
Q ss_pred eeeEeccCCCceEEEEEcCCCCcEEEEEeC--CCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCC
Q psy4571 185 KLHSFESHKDEIFQVQWSPHNETILASSGT--DRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNE 262 (437)
Q Consensus 185 ~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~--dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~ 262 (437)
.............++++|++.+++++... .+.|..+++..... ..+ ....-.....++++|++
T Consensus 114 -~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~------------~~~--~~~~~~~P~gia~d~~~ 178 (267)
T 1npe_A 114 -RVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNR------------RIL--AQDNLGLPNGLTFDAFS 178 (267)
T ss_dssp -EEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCC------------EEE--ECTTCSCEEEEEEETTT
T ss_pred -EEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCc------------EEE--EECCCCCCcEEEEcCCC
Confidence 11222222456899999976655555543 46888888764321 111 11222457899999988
Q ss_pred CeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhh
Q psy4571 263 PWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQ 342 (437)
Q Consensus 263 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~ 342 (437)
.++.++....+.|..+|........... ....+..++.. .+.++++....+. |..+|..+|+.+
T Consensus 179 ~~lyv~d~~~~~I~~~~~~g~~~~~~~~----~~~~P~gi~~d-~~~lyva~~~~~~-----------v~~~d~~~g~~~ 242 (267)
T 1npe_A 179 SQLCWVDAGTHRAECLNPAQPGRRKVLE----GLQYPFAVTSY-GKNLYYTDWKTNS-----------VIAMDLAISKEM 242 (267)
T ss_dssp TEEEEEETTTTEEEEEETTEEEEEEEEE----CCCSEEEEEEE-TTEEEEEETTTTE-----------EEEEETTTTEEE
T ss_pred CEEEEEECCCCEEEEEecCCCceEEEec----CCCCceEEEEe-CCEEEEEECCCCe-----------EEEEeCCCCCce
Confidence 8677788888999999997543222111 11122333332 3334444333344 788888888887
Q ss_pred hhhcCCC-ccccccCCCCCCc
Q psy4571 343 RQLLGTE-EESSDRHSSDNDT 362 (437)
Q Consensus 343 ~~~~~h~-~~~~~~~~~~~~~ 362 (437)
..+.... .....+.+.|++.
T Consensus 243 ~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 243 DTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp EEECCSSCCCCCCEEEECSCC
T ss_pred EEEccccccccceeeecCccC
Confidence 7764332 2345555555543
No 222
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.95 E-value=5.9e-08 Score=88.42 Aligned_cols=189 Identities=10% Similarity=-0.019 Sum_probs=114.8
Q ss_pred CcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCee-eecc-CCCCeEEEEEeCCCCcEEEE----EeC--------
Q psy4571 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSH-TVDA-HTAEVNCLSFNPYSEYILAT----GSA-------- 170 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~-~~~~-h~~~v~~l~~~~~~~~~l~s----gs~-------- 170 (437)
.+..++++| +++++++...++.|.+|+.+ + ....+. ...+ ....+.+++++|+|. ++++ |..
T Consensus 87 ~~~gl~~d~-dG~l~v~~~~~~~v~~~~~~-g-~~~~~~~~~~~~~~~~~~~i~~d~dG~-l~~td~~~g~~~~~~~~~~ 162 (305)
T 3dr2_A 87 FTNGNAVDA-QQRLVHCEHGRRAITRSDAD-G-QAHLLVGRYAGKRLNSPNDLIVARDGA-IWFTDPPFGLRKPSQGCPA 162 (305)
T ss_dssp CEEEEEECT-TSCEEEEETTTTEEEEECTT-S-CEEEEECEETTEECSCCCCEEECTTSC-EEEECCSGGGSCGGGSCCC
T ss_pred ccceeeECC-CCCEEEEECCCCEEEEECCC-C-CEEEEEeccCCCccCCCCCEEECCCCC-EEEeCcCCCcccccccccc
Confidence 467899999 56666655556789999875 2 111111 1111 113467899999998 5665 332
Q ss_pred -----CCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeC-----CCeEEEEEcCCCCCCCCCCCCCCCCC
Q psy4571 171 -----DKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGT-----DRRLHVWDLSKIGEEQSTEDAEDGPP 240 (437)
Q Consensus 171 -----dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~-----dg~i~vwd~~~~~~~~~~~~~~~~~~ 240 (437)
.+.|..+|..+++. ..+. .......++|+|+++.++++.+. ++.|.+|++.... ... .
T Consensus 163 ~~~~~~~~v~~~d~~~g~~--~~~~-~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~--------~ 230 (305)
T 3dr2_A 163 DPELAHHSVYRLPPDGSPL--QRMA-DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA-LHD--------R 230 (305)
T ss_dssp CCSSSCEEEEEECSSSCCC--EEEE-EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE-EEE--------E
T ss_pred ccccCCCeEEEEcCCCCcE--EEEe-cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC-ccC--------C
Confidence 35678888766543 2222 33556889999999864444333 2789999987542 100 0
Q ss_pred ceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCc
Q psy4571 241 ELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPT 319 (437)
Q Consensus 241 ~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~ 319 (437)
+.+ ..........+++.++|+ +.++. .+ .|.+|+.. ++.+..+... ..+..++|+|+++.|..++.++.
T Consensus 231 ~~~--~~~~~~~pdgi~~d~~G~-lwv~~-~~-gv~~~~~~-g~~~~~~~~~----~~~~~~~f~~d~~~L~it~~~~l 299 (305)
T 3dr2_A 231 RHF--ASVPDGLPDGFCVDRGGW-LWSSS-GT-GVCVFDSD-GQLLGHIPTP----GTASNCTFDQAQQRLFITGGPCL 299 (305)
T ss_dssp EEE--ECCSSSCCCSEEECTTSC-EEECC-SS-EEEEECTT-SCEEEEEECS----SCCCEEEECTTSCEEEEEETTEE
T ss_pred eEE--EECCCCCCCeEEECCCCC-EEEec-CC-cEEEECCC-CCEEEEEECC----CceeEEEEeCCCCEEEEEcCCeE
Confidence 111 111223345688999998 55443 44 49999984 5555555432 24677789999987777665543
No 223
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.92 E-value=1.1e-08 Score=95.29 Aligned_cols=214 Identities=11% Similarity=-0.006 Sum_probs=126.6
Q ss_pred eEEeeCCCCCEEEEEE----------CCCcEEEEEcCCCCCCCCeeeeccC-------CCCeEEEEEeCCCCcEEEEEeC
Q psy4571 108 DVAWHLLHESLFGSVA----------DDQKLMIWDTRSHNVSKPSHTVDAH-------TAEVNCLSFNPYSEYILATGSA 170 (437)
Q Consensus 108 ~~~~sp~~~~~l~~~~----------~dg~v~vwd~~~~~~~~~~~~~~~h-------~~~v~~l~~~~~~~~~l~sgs~ 170 (437)
.+.++|+ ++.++++. .++.|.+||+. ..+.+..+... ......++++|||++ ++++..
T Consensus 69 ~i~~spD-g~~lyVan~~~~r~~~G~~~~~VsviD~~---T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~-lyVan~ 143 (368)
T 1mda_H 69 LAVAGHS-GSDFALASTSFARSAKGKRTDYVEVFDPV---TFLPIADIELPDAPRFSVGPRVHIIGNCASSAC-LLFFLF 143 (368)
T ss_dssp EEEECTT-SSCEEEEEEEETTTTSSSEEEEEEEECTT---TCCEEEEEEETTSCSCCBSCCTTSEEECTTSSC-EEEEEC
T ss_pred ceEECCC-CCEEEEEcccccccccCCCCCEEEEEECC---CCCEEEEEECCCccccccCCCcceEEEcCCCCE-EEEEcc
Confidence 7999995 44444454 36889999999 55666665432 123567999999997 666554
Q ss_pred --CCeEEE--EeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCC-----CCCCCCC---CCCCCC
Q psy4571 171 --DKTVAL--WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK-----IGEEQST---EDAEDG 238 (437)
Q Consensus 171 --dg~i~l--wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~-----~~~~~~~---~~~~~~ 238 (437)
+..+.+ +|+.+ +..+.. .+. ..+.|+++..+++.+.|+.+.+.|+.. ++..... ......
T Consensus 144 ~~~~~v~V~~iD~~t----v~~i~v-~~~---~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~ 215 (368)
T 1mda_H 144 GSSAAAGLSVPGASD----DQLTKS-ASC---FHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQ 215 (368)
T ss_dssp SSSCEEEEEETTTEE----EEEEEC-SSC---CCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSC
T ss_pred CCCCeEEEEEEchhh----ceEEEC-CCc---eEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCC
Confidence 467888 99876 222221 111 223355544455556666666666654 1111000 000000
Q ss_pred C------Cc-------eEEEec--C------------------cc---ccEEEEEEccCCCeEEEEEe---C-----CCe
Q psy4571 239 P------PE-------LLFIHG--G------------------HT---AKISDFSWNPNEPWVICSVS---E-----DNI 274 (437)
Q Consensus 239 ~------~~-------~~~~~~--~------------------h~---~~v~~l~~~p~~~~~l~s~~---~-----dg~ 274 (437)
| .. .+.... + +. .....++++|++++++++.. . ++.
T Consensus 216 P~~~~~~~~~~~vs~~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~ 295 (368)
T 1mda_H 216 AAQANYPGMLVWAVASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAEN 295 (368)
T ss_dssp CEEETTTTEEEECBSSCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEE
T ss_pred ccccccCCEEEEEcCCEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCC
Confidence 0 00 000000 0 00 00111679999997766554 2 235
Q ss_pred EEEEeCCCCCCceeeeeeecccCCceeeeecCCCCc-ccccC-CCCcccccccccccccccccchhhhhhhhhcCCC
Q psy4571 275 MQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASS-TASES-PTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTE 349 (437)
Q Consensus 275 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~-l~s~s-~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~ 349 (437)
+.++|+.+.+.+..+.... .+..++++|||+. +++.. .++. +.++|+.+++.++++..+.
T Consensus 296 ~~ViD~~t~~vv~~i~vg~----~p~gi~~s~Dg~~l~va~~~~~~~-----------VsVID~~t~kvv~~I~vg~ 357 (368)
T 1mda_H 296 TSSVTASVGQTSGPISNGH----DSDAIIAAQDGASDNYANSAGTEV-----------LDIYDAASDQDQSSVELDK 357 (368)
T ss_dssp EEEEESSSCCEEECCEEEE----EECEEEECCSSSCEEEEEETTTTE-----------EEEEESSSCEEEEECCCCS
T ss_pred EEEEECCCCeEEEEEECCC----CcceEEECCCCCEEEEEccCCCCe-----------EEEEECCCCcEEEEEECCC
Confidence 6699999999888887643 4677899999985 44444 4666 8999999999888886554
No 224
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.87 E-value=2e-07 Score=87.46 Aligned_cols=227 Identities=12% Similarity=0.083 Sum_probs=136.4
Q ss_pred EEecCceEEEEEeeeccc-ccc-------------C-CCcceEEeeCCCCCEEEEEECC------CcEEEEEcCCCCCCC
Q psy4571 82 SCILNISILFFEIIFTQN-FPF-------------P-LSRQDVAWHLLHESLFGSVADD------QKLMIWDTRSHNVSK 140 (437)
Q Consensus 82 ~~~~~~~i~~~~~~~~~~-~~~-------------~-~~v~~~~~sp~~~~~l~~~~~d------g~v~vwd~~~~~~~~ 140 (437)
.+..++.|.++|...... ... . .....+...| ++ +++++..+ |.|.++|.+ +.+
T Consensus 101 ~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~p-dG-i~Vs~~g~~~g~~~g~v~vlD~~---T~~ 175 (462)
T 2ece_A 101 PGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGP-DA-IYISALGNEEGEGPGGILMLDHY---SFE 175 (462)
T ss_dssp EBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECS-SC-EEEEEEEETTSCSCCEEEEECTT---TCC
T ss_pred ccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECC-Ce-EEEEcCCCcCCCCCCeEEEEECC---CCe
Confidence 555678899999753311 100 0 1234567788 45 77666655 789999998 455
Q ss_pred CeeeeccC--C-CCeEEEEEeCCCCcEEEEEe-------------------CCCeEEEEeCCCCceeeeEeccC--CCce
Q psy4571 141 PSHTVDAH--T-AEVNCLSFNPYSEYILATGS-------------------ADKTVALWDLRNLKLKLHSFESH--KDEI 196 (437)
Q Consensus 141 ~~~~~~~h--~-~~v~~l~~~~~~~~~l~sgs-------------------~dg~i~lwd~~~~~~~~~~~~~h--~~~v 196 (437)
.+..+... . .--..+.|+|+++. +++.. .+.+|.+||+.+.+. +.++..- ....
T Consensus 176 v~~~~~~~~~~~~~~Yd~~~~p~~~~-mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~-~~tI~vg~~g~~P 253 (462)
T 2ece_A 176 PLGKWEIDRGDQYLAYDFWWNLPNEV-LVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKR-IHSLTLGEENRMA 253 (462)
T ss_dssp EEEECCSBCTTCCCCCCEEEETTTTE-EEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEE-EEEEESCTTEEEE
T ss_pred EEEEEccCCCCccccceEEECCCCCE-EEEccCcCccccccccchhhhhhccCCEEEEEECCCCcE-eeEEecCCCCCcc
Confidence 56555422 1 22346888999994 77764 378999999998543 5555431 1234
Q ss_pred EEEEE--cCCCCcEEEEEe-----CCCeEEEEEcCCCCCCCCCCC-CCCCCC-ceEE----EecCccccEEEEEEccCCC
Q psy4571 197 FQVQW--SPHNETILASSG-----TDRRLHVWDLSKIGEEQSTED-AEDGPP-ELLF----IHGGHTAKISDFSWNPNEP 263 (437)
Q Consensus 197 ~~v~~--~p~~~~~l~sg~-----~dg~i~vwd~~~~~~~~~~~~-~~~~~~-~~~~----~~~~h~~~v~~l~~~p~~~ 263 (437)
..+.| +|++++.++++- .+++|.+|....+........ ....+. ..+. .+.+-......|.++|||+
T Consensus 254 ~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGr 333 (462)
T 2ece_A 254 LELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDK 333 (462)
T ss_dssp EEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSC
T ss_pred ceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCC
Confidence 56666 999998777776 788898877654211000000 000000 0000 0000023467899999999
Q ss_pred eEEEEEeCCCeEEEEeCCCCCC---ceeeeeeec-----------ccCCceeeeecCCCCcccccC
Q psy4571 264 WVICSVSEDNIMQEYCDSTDSD---TKTMRLDSI-----------RSNGGISSTASPTASSTASES 315 (437)
Q Consensus 264 ~~l~s~~~dg~i~iwd~~~~~~---~~~~~~~~~-----------~~~~~~~~~~s~~g~~l~s~s 315 (437)
++.++.-..+.|.++|+..... +..+..... ...++..+.++|||++|.++.
T Consensus 334 fLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 334 FLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp EEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred EEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 8888888899999999864322 223322100 011467789999999888776
No 225
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.84 E-value=9.8e-06 Score=71.96 Aligned_cols=182 Identities=7% Similarity=-0.004 Sum_probs=115.0
Q ss_pred CcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeC--CCeEEEEeCCCC
Q psy4571 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSA--DKTVALWDLRNL 182 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~--dg~i~lwd~~~~ 182 (437)
....++++|.++.++++-...+.|.+++++.. ...............++++|++.+++++... .+.|..++++..
T Consensus 80 ~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~---~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~ 156 (267)
T 1npe_A 80 SPEGIALDHLGRTIFWTDSQLDRIEVAKMDGT---QRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGT 156 (267)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSC---SCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSC
T ss_pred CccEEEEEecCCeEEEEECCCCEEEEEEcCCC---CEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCC
Confidence 56789999965666666666789999998732 1111222222467899999977764444433 468888888753
Q ss_pred ceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCC
Q psy4571 183 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNE 262 (437)
Q Consensus 183 ~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~ 262 (437)
.. .............++++|++.+++++-...+.|.++|+...... ....+ ......++. ++
T Consensus 157 ~~-~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~--------------~~~~~-~~~P~gi~~--d~ 218 (267)
T 1npe_A 157 NR-RILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRR--------------KVLEG-LQYPFAVTS--YG 218 (267)
T ss_dssp CC-EEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEE--------------EEEEC-CCSEEEEEE--ET
T ss_pred Cc-EEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceE--------------EEecC-CCCceEEEE--eC
Confidence 22 11121223457899999988777777777889999998753211 11111 123355655 45
Q ss_pred CeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCC
Q psy4571 263 PWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTAS 309 (437)
Q Consensus 263 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~ 309 (437)
.+++++...++.|..+|..+++.+..+.... ...+..+++.|++.
T Consensus 219 ~~lyva~~~~~~v~~~d~~~g~~~~~i~~g~--~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 219 KNLYYTDWKTNSVIAMDLAISKEMDTFHPHK--QTRLYGITIALSQC 263 (267)
T ss_dssp TEEEEEETTTTEEEEEETTTTEEEEEECCSS--CCCCCCEEEECSCC
T ss_pred CEEEEEECCCCeEEEEeCCCCCceEEEcccc--ccccceeeecCccC
Confidence 5577777778999999999887776665321 11345566677654
No 226
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.83 E-value=6.7e-10 Score=104.33 Aligned_cols=188 Identities=11% Similarity=0.011 Sum_probs=98.3
Q ss_pred CcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeCCCCCEEEEEECC
Q psy4571 46 FDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHLLHESLFGSVADD 125 (437)
Q Consensus 46 ~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~d 125 (437)
.+.++++++.|+.+..||..++.+.-.... . .+.+..+.+ ++.++++++.|
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~--------------------------~~~s~p~~~-~g~~~v~~s~d 58 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--D--------------------------PVLQVPTHV-EEPAFLPDPND 58 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--C--------------------------CSCCCC------CCEEECTTT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--C--------------------------CceecceEc-CCCEEEEeCCC
Confidence 467889999999999999877765422211 1 111222333 45567777899
Q ss_pred CcEEEEEcCCCCCCCCeeeeccCCC-CeE-EEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcC
Q psy4571 126 QKLMIWDTRSHNVSKPSHTVDAHTA-EVN-CLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSP 203 (437)
Q Consensus 126 g~v~vwd~~~~~~~~~~~~~~~h~~-~v~-~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p 203 (437)
|.|+.||.+++ +.+.....+.. .+. +..+. .+. .+++|+.|+.|..||.++++. +..+..+. ...++|
T Consensus 59 g~l~a~d~~tG---~~~w~~~~~~~~~~~~sp~~~-~~~-~v~~g~~dg~v~a~D~~tG~~-~w~~~~~~----~~~~~p 128 (369)
T 2hz6_A 59 GSLYTLGSKNN---EGLTKLPFTIPELVQASPCRS-SDG-ILYMGKKQDIWYVIDLLTGEK-QQTLSSAF----ADSLSP 128 (369)
T ss_dssp CCEEEC--------CCSEECSCCHHHHHTTCSCC-------CCCCEEEEEEEEECCC-----------------------
T ss_pred CEEEEEECCCC---ceeeeeeccCccccccCceEe-cCC-EEEEEeCCCEEEEEECCCCcE-EEEecCCC----cccccc
Confidence 99999999743 33333322210 000 00111 234 378888999999999999776 55554332 245567
Q ss_pred CCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCC---CeEEEEEeCCCeEEEEeC
Q psy4571 204 HNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNE---PWVICSVSEDNIMQEYCD 280 (437)
Q Consensus 204 ~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~---~~~l~s~~~dg~i~iwd~ 280 (437)
++. .+++++.|+.|+.||.++++.... +..+ ......+.++. . .++.++.||.++.||.
T Consensus 129 ~~~-~v~~~~~dg~v~a~d~~tG~~~W~--------------~~~~--~~~~~~~~~~~~~~~-~v~~~~~dg~v~a~d~ 190 (369)
T 2hz6_A 129 STS-LLYLGRTEYTITMYDTKTRELRWN--------------ATYF--DYAASLPEDDVDYKM-SHFVSNGDGLVVTVDS 190 (369)
T ss_dssp -----EEEEEEEEEEECCCSSSSSCCCE--------------EEEE--EECCBCCCCCTTCCC-CEEEEETSCEEEEECT
T ss_pred cCC-EEEEEecCCEEEEEECCCCCEEEe--------------Eecc--cccCccccCCccccc-eEEEECCCCEEEEEEC
Confidence 776 477888899999999998765433 1111 11222333331 3 3567889999999999
Q ss_pred CCCCCceeee
Q psy4571 281 STDSDTKTMR 290 (437)
Q Consensus 281 ~~~~~~~~~~ 290 (437)
++++.+....
T Consensus 191 ~tG~~~W~~~ 200 (369)
T 2hz6_A 191 ESGDVLWIQN 200 (369)
T ss_dssp TTCCEEEEEE
T ss_pred CCCcEEEEec
Confidence 9998766554
No 227
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.82 E-value=7e-08 Score=89.54 Aligned_cols=241 Identities=8% Similarity=0.004 Sum_probs=134.1
Q ss_pred CCcceEEeeCCCCCEEEEEE--CCCcEEEEEcCCCCCCCCe----eeeccCCCCeEEEEEeCCCCcEEEEEeC-----CC
Q psy4571 104 LSRQDVAWHLLHESLFGSVA--DDQKLMIWDTRSHNVSKPS----HTVDAHTAEVNCLSFNPYSEYILATGSA-----DK 172 (437)
Q Consensus 104 ~~v~~~~~sp~~~~~l~~~~--~dg~v~vwd~~~~~~~~~~----~~~~~h~~~v~~l~~~~~~~~~l~sgs~-----dg 172 (437)
..+..++++| +++++++.. .++.++||.+.++ ..... .....|...+..+++++++. ++++-.. ++
T Consensus 17 ~~p~~va~~~-~g~~~v~~~~~~~~~~~l~~~~~g-~~~~~p~~~~~~~~~~~~p~gv~~d~~g~-L~v~D~g~~~~~~~ 93 (343)
T 2qe8_A 17 LAPGNITLTP-DGRLFLSLHQFYQPEMQVAELTQD-GLIPFPPQSGNAIITFDTVLGIKSDGNGI-VWMLDNGNQSKSVP 93 (343)
T ss_dssp SCEEEEEECT-TSCEEEEECGGGCCSCSEEEEETT-EEEESCCCCSSCCCCCSCEEEEEECSSSE-EEEEECHHHHTSCC
T ss_pred CCcceEEECC-CCCEEEEeCCCCCCceEEEEECCC-CeecCCCcccCcccceeEeeEEEEcCCCc-EEEEcCCCCcCCCC
Confidence 4677899999 577877753 2343555555421 10000 01123556899999999986 4555433 57
Q ss_pred eEEEEeCCCCceeeeEecc------CCCceEEEEEcCCCCcEEEEEe---CCCeEEEEEcCCCCCCCCCCCC-CCCCCce
Q psy4571 173 TVALWDLRNLKLKLHSFES------HKDEIFQVQWSPHNETILASSG---TDRRLHVWDLSKIGEEQSTEDA-EDGPPEL 242 (437)
Q Consensus 173 ~i~lwd~~~~~~~~~~~~~------h~~~v~~v~~~p~~~~~l~sg~---~dg~i~vwd~~~~~~~~~~~~~-~~~~~~~ 242 (437)
.|.+||+.+++. +..+.. +...+..++++|++..++++.. .++.|.+||+.++......... ...+...
T Consensus 94 ~i~~~d~~tg~~-~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~ 172 (343)
T 2qe8_A 94 KLVAWDTLNNQL-SRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDI 172 (343)
T ss_dssp EEEEEETTTTEE-EEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSC
T ss_pred eEEEEECCCCeE-EEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCccccccc
Confidence 899999998663 333321 2235689999987655667765 6789999999876533221110 0000000
Q ss_pred EEEecC--------------ccccEEEEEEccCCCeEEEEEeCC-CeEEEEeCC---CCCC-----ceeeeeeecccCCc
Q psy4571 243 LFIHGG--------------HTAKISDFSWNPNEPWVICSVSED-NIMQEYCDS---TDSD-----TKTMRLDSIRSNGG 299 (437)
Q Consensus 243 ~~~~~~--------------h~~~v~~l~~~p~~~~~l~s~~~d-g~i~iwd~~---~~~~-----~~~~~~~~~~~~~~ 299 (437)
.....+ ....+..|+|+|+|+. |+.+..+ ..+..++.. .+.. ...+... ......
T Consensus 173 ~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~-ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-g~~g~p 250 (343)
T 2qe8_A 173 DLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEW-LYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERY-SEKPIC 250 (343)
T ss_dssp CCEETTEECBEECTTSCEECCCCCEEEEEECTTSCE-EEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEE-EECCSC
T ss_pred ceeECCEEEEeccCCCceeceecccceeEeccCCCE-EEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEec-ccCCCC
Confidence 000111 0124688999999984 4455444 455555532 1110 0011110 011234
Q ss_pred eeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCC--CccccccCCCCCCc
Q psy4571 300 ISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGT--EEESSDRHSSDNDT 362 (437)
Q Consensus 300 ~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h--~~~~~~~~~~~~~~ 362 (437)
-.++++++|.++++...++. |.+||..+|+.. .+... ......+++.++|.
T Consensus 251 dgia~d~~G~l~va~~~~~~-----------V~~~d~~~G~~~-~~~~~~~~~~p~~va~~~~g~ 303 (343)
T 2qe8_A 251 DGISIDKDHNIYVGDLAHSA-----------IGVITSADRAYK-LLVTDEKLSWTDSFNFGSDGY 303 (343)
T ss_dssp SCEEECTTCCEEEEEGGGTE-----------EEEEETTTTEEE-EEEECGGGSCEEEEEECTTSC
T ss_pred ceEEECCCCCEEEEccCCCe-----------EEEEECCCCCEE-EEEECCceecCCeeEECCCCc
Confidence 45788999998888777666 778887555432 22211 22355666777665
No 228
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.79 E-value=3.1e-07 Score=93.06 Aligned_cols=174 Identities=8% Similarity=0.051 Sum_probs=109.7
Q ss_pred EEEEeCCCCcEEEEEeCCC-------------------eEEEEeCCCCceeeeEecc--CC-------CceEEEEEcCCC
Q psy4571 154 CLSFNPYSEYILATGSADK-------------------TVALWDLRNLKLKLHSFES--HK-------DEIFQVQWSPHN 205 (437)
Q Consensus 154 ~l~~~~~~~~~l~sgs~dg-------------------~i~lwd~~~~~~~~~~~~~--h~-------~~v~~v~~~p~~ 205 (437)
.++++|++. +++.++.++ +|..+|.++++. +..+.. |. .....+....+|
T Consensus 247 ~~~~d~~~~-~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~-~W~~~~~~~d~wd~~~~~~p~l~~~~~dG 324 (677)
T 1kb0_A 247 SMTFDAELN-TMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKY-KWHYQETPGDNWDYTSTQPMILADIKIAG 324 (677)
T ss_dssp CEEEETTTT-EEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCE-EEEEESSTTCCSCCCCCSCCEEEEEEETT
T ss_pred ceeEcCCCC-EEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCE-EEEEecCCCcccccccCCCcEEEecccCC
Confidence 578889888 477777664 599999999776 444332 21 122333444466
Q ss_pred C--cEEEEEeCCCeEEEEEcCCCCCCCCCCCCCC-------CCCceEE------------Eec---CccccEEEEEEccC
Q psy4571 206 E--TILASSGTDRRLHVWDLSKIGEEQSTEDAED-------GPPELLF------------IHG---GHTAKISDFSWNPN 261 (437)
Q Consensus 206 ~--~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~-------~~~~~~~------------~~~---~h~~~v~~l~~~p~ 261 (437)
+ ..++.++.+|.++++|..+++.......... .....+. .+. +... -..++++|+
T Consensus 325 ~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~-w~~~a~dp~ 403 (677)
T 1kb0_A 325 KPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHN-WHPMSFNPQ 403 (677)
T ss_dssp EEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSC-SSCCEEETT
T ss_pred cEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccC-CCCceEcCC
Confidence 2 3688999999999999999876433211100 0000000 000 0000 125788998
Q ss_pred CCeEEEEEeC-------------------------------------------CCeEEEEeCCCCCCceeeeeeecccCC
Q psy4571 262 EPWVICSVSE-------------------------------------------DNIMQEYCDSTDSDTKTMRLDSIRSNG 298 (437)
Q Consensus 262 ~~~~l~s~~~-------------------------------------------dg~i~iwd~~~~~~~~~~~~~~~~~~~ 298 (437)
+. +++.... .|.|..||+.+++.+..+... ..
T Consensus 404 ~~-~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~----~~ 478 (677)
T 1kb0_A 404 TG-LVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHV----SP 478 (677)
T ss_dssp TT-EEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEES----SS
T ss_pred CC-EEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCC----CC
Confidence 88 5545432 278999999999877666532 22
Q ss_pred ceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhc
Q psy4571 299 GISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLL 346 (437)
Q Consensus 299 ~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~ 346 (437)
.....++.++..++.++.++. +++||..+|+++..+.
T Consensus 479 ~~~g~~~~~g~~v~~g~~dg~-----------l~a~D~~tG~~lw~~~ 515 (677)
T 1kb0_A 479 WNGGTLTTAGNVVFQGTADGR-----------LVAYHAATGEKLWEAP 515 (677)
T ss_dssp CCCCEEEETTTEEEEECTTSE-----------EEEEETTTCCEEEEEE
T ss_pred CcCcceEeCCCEEEEECCCCc-----------EEEEECCCCceeeeee
Confidence 333456677888888888888 7889999998887774
No 229
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.79 E-value=1.3e-06 Score=82.75 Aligned_cols=228 Identities=10% Similarity=0.011 Sum_probs=144.9
Q ss_pred EEEeeCCCcceEEEee----------ccCceEeeecCCCceeE------------------EEecCCCCeEEEe--c-Cc
Q psy4571 39 RLCVAEPFDDAVEERV----------INEEYKIWKKNTPFLYD------------------LVVNNYVANISCI--L-NI 87 (437)
Q Consensus 39 ~~~~~~~~~~~l~tgs----------~d~~v~iw~~~~~~~~~------------------~~~~~~~~~i~~~--~-~~ 87 (437)
.+.++ |+++.++.+. .++.|.++|..+..+.. +.+++++..+... . ++
T Consensus 122 gia~S-pDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~ 200 (426)
T 3c75_H 122 HPVAA-EDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAP 200 (426)
T ss_dssp EEEEC-TTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSC
T ss_pred ceEEC-CCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCC
Confidence 58888 9998887775 46789999977665543 3445566666433 2 46
Q ss_pred eEEEEEeeeccc---cccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeee----eccCCCCe-EEEEEeC
Q psy4571 88 SILFFEIIFTQN---FPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHT----VDAHTAEV-NCLSFNP 159 (437)
Q Consensus 88 ~i~~~~~~~~~~---~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~----~~~h~~~v-~~l~~~~ 159 (437)
.|.+.|....+. ++.+. +....|.+...+++.+.||.+.+.+..+ .+.... +.....++ ..+.+.+
T Consensus 201 ~VsVID~~t~kvv~~I~v~g---~~~~~p~g~~~~v~~~~dG~~~~V~~~~---~~v~~~~~~~~~v~~~p~~~~~~~~~ 274 (426)
T 3c75_H 201 AVGVVDLEGKTFDRMLDVPD---CYHIFPASPTVFYMNCRDGSLARVDFAD---GETKVTNTEVFHTEDELLINHPAFSL 274 (426)
T ss_dssp EEEEEETTTTEEEEEEECCS---EEEEEEEETTEEEEEETTSSEEEEECCT---TCCEEEECCCCSCTTSCBCSCCEECT
T ss_pred eEEEEECCCCeEEEEEEcCC---ceeeccCCCcEEEEEcCCCCEEEEECCC---CcEEEEeeeeeccCCCceeeEeeecC
Confidence 788888655432 22222 2345565557777788899988888842 232211 11111121 2356789
Q ss_pred CCCcEEEEEeCCCeEEEEeCCCCceee-eEec----------cCCCceEEEEEcCCCCcEEEEEe---------CCCeEE
Q psy4571 160 YSEYILATGSADKTVALWDLRNLKLKL-HSFE----------SHKDEIFQVQWSPHNETILASSG---------TDRRLH 219 (437)
Q Consensus 160 ~~~~~l~sgs~dg~i~lwd~~~~~~~~-~~~~----------~h~~~v~~v~~~p~~~~~l~sg~---------~dg~i~ 219 (437)
++.. ++..+..+.|.+.|+......+ ..+. ........++++|++++++++.. .++.|.
T Consensus 275 dg~~-~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~Vs 353 (426)
T 3c75_H 275 RSGR-LVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVV 353 (426)
T ss_dssp TTCE-EEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEE
T ss_pred CCCE-EEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEE
Confidence 9886 5555678999999987533211 1110 01112223789999987666543 135799
Q ss_pred EEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCC-eEEEEEeCCCeEEEEeCCCCCCceee
Q psy4571 220 VWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEP-WVICSVSEDNIMQEYCDSTDSDTKTM 289 (437)
Q Consensus 220 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~ 289 (437)
+.|+.+.+.... +.. .....+++|+|+|+ .++++...++.|.++|+.+++.++.+
T Consensus 354 VID~~T~kvv~~--------------I~v-g~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 354 VLNAETGERINK--------------IEL-GHEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp EEETTTCCEEEE--------------EEE-EEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred EEECCCCeEEEE--------------EEC-CCCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence 999998754433 221 22578899999998 55555557999999999999888776
No 230
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.78 E-value=4.3e-07 Score=92.27 Aligned_cols=294 Identities=7% Similarity=0.011 Sum_probs=164.4
Q ss_pred cceEEEeeccCceEeeecCCCceeEEEecC--------------------CCCeE-EEecCceEEEEEeeecccc---cc
Q psy4571 47 DDAVEERVINEEYKIWKKNTPFLYDLVVNN--------------------YVANI-SCILNISILFFEIIFTQNF---PF 102 (437)
Q Consensus 47 ~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~--------------------~~~~i-~~~~~~~i~~~~~~~~~~~---~~ 102 (437)
+..++.++.++.+..+|..++...=..-.. ....+ ....++.+..+|...++.. ..
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~dg~l~AlDa~TG~~~W~~~~ 149 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVLDGRLEAIDAKTGQRAWSVDT 149 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred CCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEccCCEEEEEECCCCCEeeeecC
Confidence 556777777888888887665533221100 11223 3345778888886655432 11
Q ss_pred C---CCcceEEeeC--CCCCEEEEEE------CCCcEEEEEcCCCCCCCCeeeecc------------------------
Q psy4571 103 P---LSRQDVAWHL--LHESLFGSVA------DDQKLMIWDTRSHNVSKPSHTVDA------------------------ 147 (437)
Q Consensus 103 ~---~~v~~~~~sp--~~~~~l~~~~------~dg~v~vwd~~~~~~~~~~~~~~~------------------------ 147 (437)
. .....+..+| .++ .++++. .+|.|+.||..++ +.+..+..
T Consensus 150 ~~~~~~~~~~~~sP~v~~g-~v~vg~~~~~~~~~g~v~a~D~~tG---~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~ 225 (689)
T 1yiq_A 150 RADHKRSYTITGAPRVVNG-KVVIGNGGAEFGVRGYVTAYDAETG---KEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGD 225 (689)
T ss_dssp CSCTTSCCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTC---CEEEEEESSCCCTTSCCCSHHHHHHHTTCCSS
T ss_pred cCCCCCCccccCCcEEECC-EEEEEeCCCccCCCCEEEEEECCCC---cEEEEecccCCCcccccccccccccccccCCc
Confidence 1 0001111122 133 444443 3689999999844 44433321
Q ss_pred -------CCCCeEEEEEeCCCCcEEEEEeCCCe-------------------EEEEeCCCCceeeeEecc--CC------
Q psy4571 148 -------HTAEVNCLSFNPYSEYILATGSADKT-------------------VALWDLRNLKLKLHSFES--HK------ 193 (437)
Q Consensus 148 -------h~~~v~~l~~~~~~~~~l~sgs~dg~-------------------i~lwd~~~~~~~~~~~~~--h~------ 193 (437)
+...-..++++|++. +++.++.++. |..+|.++++. +..+.. |.
T Consensus 226 ~w~~~~~g~~~w~~~~~d~~~~-~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~-~W~~~~~~~d~wd~~~ 303 (689)
T 1yiq_A 226 AYVEQGGGGTAWDSFAYDPELN-LLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEY-VWHYQTTPGDAWDYTA 303 (689)
T ss_dssp THHHHCEECCCCSCEEEETTTT-EEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCE-EEEEESSTTCCSCCCC
T ss_pred eeeecCCCCccccceeEcCCCC-EEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCce-eEeeecCCcccccccC
Confidence 001112578888877 5888887764 99999999876 444432 21
Q ss_pred -CceEEEEEcCCCC--cEEEEEeCCCeEEEEEcCCCCCCCCCCCCCC--------CCCceE---------------EEec
Q psy4571 194 -DEIFQVQWSPHNE--TILASSGTDRRLHVWDLSKIGEEQSTEDAED--------GPPELL---------------FIHG 247 (437)
Q Consensus 194 -~~v~~v~~~p~~~--~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~--------~~~~~~---------------~~~~ 247 (437)
.+........+|+ ..++.++.+|.++++|.++++.......... .....+ ....
T Consensus 304 ~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p 383 (689)
T 1yiq_A 304 TQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTP 383 (689)
T ss_dssp CSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESS
T ss_pred CCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCC
Confidence 2222223333443 2578899999999999999876422111000 000000 0000
Q ss_pred ---CccccEEEEEEccCCCeEEEEEeC---------------------------------------------CCeEEEEe
Q psy4571 248 ---GHTAKISDFSWNPNEPWVICSVSE---------------------------------------------DNIMQEYC 279 (437)
Q Consensus 248 ---~h~~~v~~l~~~p~~~~~l~s~~~---------------------------------------------dg~i~iwd 279 (437)
+.. ....++++|+.. +++.... +|.|+.||
T Consensus 384 ~~~Gg~-~w~~~a~dp~~~-~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D 461 (689)
T 1yiq_A 384 AFWGAH-DWQPMSYNPDTG-LVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWD 461 (689)
T ss_dssp CTTCSS-CSSCCEEETTTT-EEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEE
T ss_pred Cccccc-CCCcceECCCCC-EEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEE
Confidence 000 112378888877 5544421 47899999
Q ss_pred CCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCCc-cccccCCC
Q psy4571 280 DSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEE-ESSDRHSS 358 (437)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~-~~~~~~~~ 358 (437)
+.+++....+.... ......++..|.+++.++.|+. ++.||..+|+++-.+..... ....+.+.
T Consensus 462 ~~tG~~~W~~~~~~----~~~~g~~~tagglvf~gt~dg~-----------l~a~D~~tG~~lw~~~~~~~~~~~p~ty~ 526 (689)
T 1yiq_A 462 PVKQQAAWEVPYVT----IFNGGTLSTAGNLVFEGSADGR-----------VIAYAADTGEKLWEQPAASGVMAAPVTYS 526 (689)
T ss_dssp TTTTEEEEEEEESS----SCCCCEEEETTTEEEEECTTSE-----------EEEEETTTCCEEEEEECSSCCCSCCEEEE
T ss_pred CCCCCeEeEccCCC----CccCccceECCCEEEEECCCCc-----------EEEEECCCCccceeeeCCCCcccCceEEE
Confidence 99998777665422 2222356677888999999988 89999999998876643322 12223334
Q ss_pred CCCcc
Q psy4571 359 DNDTE 363 (437)
Q Consensus 359 ~~~~~ 363 (437)
.+|+.
T Consensus 527 ~~G~q 531 (689)
T 1yiq_A 527 VDGEQ 531 (689)
T ss_dssp ETTEE
T ss_pred ECCEE
Confidence 55553
No 231
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.77 E-value=8e-08 Score=90.15 Aligned_cols=230 Identities=12% Similarity=0.057 Sum_probs=137.3
Q ss_pred eEEee--CCCCCEEEEEECCCcEEEEEcCCCC-CCCCeeeec------c-CCCCeEEEEEeCCCCcEEEEEeCC------
Q psy4571 108 DVAWH--LLHESLFGSVADDQKLMIWDTRSHN-VSKPSHTVD------A-HTAEVNCLSFNPYSEYILATGSAD------ 171 (437)
Q Consensus 108 ~~~~s--p~~~~~l~~~~~dg~v~vwd~~~~~-~~~~~~~~~------~-h~~~v~~l~~~~~~~~~l~sgs~d------ 171 (437)
+..++ ++...+++.+..++.|.|+|+.+.. ..+..+.+. . .......+...|+| +++++..+
T Consensus 86 ~~~~~~~~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG--i~Vs~~g~~~g~~~ 163 (462)
T 2ece_A 86 CPNGKPNIERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA--IYISALGNEEGEGP 163 (462)
T ss_dssp STTCCTTCCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC--EEEEEEEETTSCSC
T ss_pred ccccCCCccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe--EEEEcCCCcCCCCC
Confidence 34456 6555567777888999999997432 223334431 0 11244567788998 46666655
Q ss_pred CeEEEEeCCCCceeeeEeccCC---CceEEEEEcCCCCcEEEEEe-------------------CCCeEEEEEcCCCCCC
Q psy4571 172 KTVALWDLRNLKLKLHSFESHK---DEIFQVQWSPHNETILASSG-------------------TDRRLHVWDLSKIGEE 229 (437)
Q Consensus 172 g~i~lwd~~~~~~~~~~~~~h~---~~v~~v~~~p~~~~~l~sg~-------------------~dg~i~vwd~~~~~~~ 229 (437)
|.|.+.|.++.+. +..+..-. .--+.+.|+|+++. +++.. .+.+|.+||+.+.+..
T Consensus 164 g~v~vlD~~T~~v-~~~~~~~~~~~~~~Yd~~~~p~~~~-mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~ 241 (462)
T 2ece_A 164 GGILMLDHYSFEP-LGKWEIDRGDQYLAYDFWWNLPNEV-LVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRI 241 (462)
T ss_dssp CEEEEECTTTCCE-EEECCSBCTTCCCCCCEEEETTTTE-EEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEE
T ss_pred CeEEEEECCCCeE-EEEEccCCCCccccceEEECCCCCE-EEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEe
Confidence 7899999998665 55554221 22456888999984 66653 3689999999875322
Q ss_pred CCCCCCCCCCCceEEEecC--ccccEEEEEE--ccCCCeEEEEEe-----CCCeEEEEeCCCCCC--ceeeeeeec----
Q psy4571 230 QSTEDAEDGPPELLFIHGG--HTAKISDFSW--NPNEPWVICSVS-----EDNIMQEYCDSTDSD--TKTMRLDSI---- 294 (437)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~--h~~~v~~l~~--~p~~~~~l~s~~-----~dg~i~iwd~~~~~~--~~~~~~~~~---- 294 (437)
+ ++.- .......+.| +|++++.++++. .+++|.+|....++. .+.+.....
T Consensus 242 ~--------------tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~ 307 (462)
T 2ece_A 242 H--------------SLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEG 307 (462)
T ss_dssp E--------------EEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCS
T ss_pred e--------------EEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccc
Confidence 2 2221 1234456666 999997777777 888998877654321 111111110
Q ss_pred -----c------cCCceeeeecCCCCcccccCC-CCcccccccccccccccccchh---hhhhhhhcCC-C---------
Q psy4571 295 -----R------SNGGISSTASPTASSTASESP-TPTNSVHEKNYWQGLVLFDILV---CEEQRQLLGT-E--------- 349 (437)
Q Consensus 295 -----~------~~~~~~~~~s~~g~~l~s~s~-d~~~~~~~~~~~~~i~~wd~~~---~~~~~~~~~h-~--------- 349 (437)
. ......+.+||||++|.++.. .+. |.++|+.. .+.+..+.-. .
T Consensus 308 ~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~-----------VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G 376 (462)
T 2ece_A 308 NLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGE-----------VRQYDISNPFKPVLTGKVKLGGIFHRADHPAG 376 (462)
T ss_dssp SCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTE-----------EEEEECSSTTSCEEEEEEECBTTTTCBCCTTS
T ss_pred cccccccccccCCCceeEEEECCCCCEEEEEeCCCCE-----------EEEEEecCCCCcEEEEEEEeCCeecccccccc
Confidence 0 133555689999998876643 334 66666642 2333333111 0
Q ss_pred ----ccccccCCCCCCccccc
Q psy4571 350 ----EESSDRHSSDNDTEDLN 366 (437)
Q Consensus 350 ----~~~~~~~~~~~~~~~~~ 366 (437)
.....+.++|+|+.+..
T Consensus 377 ~~~~ggPr~~~lSpDGk~LyV 397 (462)
T 2ece_A 377 HKLTGAPQMLEISRDGRRVYV 397 (462)
T ss_dssp CCCCSCCCCEEECTTSSEEEE
T ss_pred ccCCCCCCEEEEcCCCCEEEE
Confidence 12456678888875544
No 232
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.76 E-value=2e-07 Score=86.68 Aligned_cols=228 Identities=8% Similarity=-0.069 Sum_probs=142.7
Q ss_pred EEEeeCCCcceEEEee----------ccCceEeeecCCCceeEE------------------EecCCCCeEEEec---Cc
Q psy4571 39 RLCVAEPFDDAVEERV----------INEEYKIWKKNTPFLYDL------------------VVNNYVANISCIL---NI 87 (437)
Q Consensus 39 ~~~~~~~~~~~l~tgs----------~d~~v~iw~~~~~~~~~~------------------~~~~~~~~i~~~~---~~ 87 (437)
.+.|+ |+++.++.+. .++.|.+||..+..+... .+++++..+.... +.
T Consensus 69 ~i~~s-pDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~ 147 (368)
T 1mda_H 69 LAVAG-HSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSA 147 (368)
T ss_dssp EEEEC-TTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSC
T ss_pred ceEEC-CCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCC
Confidence 58899 9998888876 478999999776554443 4455555553332 34
Q ss_pred eEEE--EEeeeccccccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCC--CCCe----eeeccCCCCeEEEEEeC
Q psy4571 88 SILF--FEIIFTQNFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNV--SKPS----HTVDAHTAEVNCLSFNP 159 (437)
Q Consensus 88 ~i~~--~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~--~~~~----~~~~~h~~~v~~l~~~~ 159 (437)
.+.+ +|......++.+. |....|.+...+++.+.||.+.+.|+++... .+.. ..+.-...+. . .+
T Consensus 148 ~v~V~~iD~~tv~~i~v~~---~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~---~-~~ 220 (368)
T 1mda_H 148 AAGLSVPGASDDQLTKSAS---CFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA---Q-AN 220 (368)
T ss_dssp EEEEEETTTEEEEEEECSS---CCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE---E-ET
T ss_pred eEEEEEEchhhceEEECCC---ceEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcc---c-cc
Confidence 6777 7765533333322 2334565666777788899998888874100 1111 0111122343 3 66
Q ss_pred CCCcEEEEEeCCCeEEEEeCCCCcee-eeEecc----------CCCceEEEEEcCCCCcEEEEEe---C-----CCeEEE
Q psy4571 160 YSEYILATGSADKTVALWDLRNLKLK-LHSFES----------HKDEIFQVQWSPHNETILASSG---T-----DRRLHV 220 (437)
Q Consensus 160 ~~~~~l~sgs~dg~i~lwd~~~~~~~-~~~~~~----------h~~~v~~v~~~p~~~~~l~sg~---~-----dg~i~v 220 (437)
++.. ++..+. +.|.+.|..+.... ...+.- .......++++|++++++++.. . ++.+.+
T Consensus 221 ~~~~-~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~V 298 (368)
T 1mda_H 221 YPGM-LVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSS 298 (368)
T ss_dssp TTTE-EEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEE
T ss_pred cCCE-EEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEE
Confidence 6665 555555 89999998753211 111110 0111222789999987665544 2 235669
Q ss_pred EEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEe-CCCeEEEEeCCCCCCceeeee
Q psy4571 221 WDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVS-EDNIMQEYCDSTDSDTKTMRL 291 (437)
Q Consensus 221 wd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~ 291 (437)
+|+.+.+.... +... ....+|+|+|||+.++++.. .++.|.++|+.+++.+..+..
T Consensus 299 iD~~t~~vv~~--------------i~vg-~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~v 355 (368)
T 1mda_H 299 VTASVGQTSGP--------------ISNG-HDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVEL 355 (368)
T ss_dssp EESSSCCEEEC--------------CEEE-EEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCC
T ss_pred EECCCCeEEEE--------------EECC-CCcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEEC
Confidence 99998755443 2222 25788999999987888888 699999999999988877764
No 233
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.65 E-value=1.5e-06 Score=75.76 Aligned_cols=203 Identities=11% Similarity=0.174 Sum_probs=128.6
Q ss_pred EEEEEeeeccccccCCCc--ceEEeeCCCCCEEEEEECCC--cEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcE
Q psy4571 89 ILFFEIIFTQNFPFPLSR--QDVAWHLLHESLFGSVADDQ--KLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYI 164 (437)
Q Consensus 89 i~~~~~~~~~~~~~~~~v--~~~~~sp~~~~~l~~~~~dg--~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~ 164 (437)
..++.....+.+++.... ..+.|+ ++.++.+.+.+| .|+++|++ +++.+....... ........+++..+
T Consensus 26 ~~~~~~~vv~~~phd~~~ftqGL~~~--~~~LyestG~~g~S~v~~vD~~---Tgkv~~~~~l~~-~~FgeGit~~g~~l 99 (262)
T 3nol_A 26 IPIYDYQIVHSYPHDTKAFTEGFFYR--NGYFYESTGLNGRSSIRKVDIE---SGKTLQQIELGK-RYFGEGISDWKDKI 99 (262)
T ss_dssp CCEEEEEEEEEEECCTTCEEEEEEEE--TTEEEEEEEETTEEEEEEECTT---TCCEEEEEECCT-TCCEEEEEEETTEE
T ss_pred CcccceEEEEEecCCCCcccceEEEE--CCEEEEECCCCCCceEEEEECC---CCcEEEEEecCC-ccceeEEEEeCCEE
Confidence 444455555666765554 788998 357777777766 89999999 455555554322 33332233345655
Q ss_pred EEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEE
Q psy4571 165 LATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLF 244 (437)
Q Consensus 165 l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~ 244 (437)
....-.++.+.++|.++.+. +.++..-. ....++++++.++++ ..++.|.++|..+.+..... .
T Consensus 100 y~ltw~~~~v~v~D~~t~~~-~~ti~~~~---eG~glt~dg~~L~~S-dGs~~i~~iDp~T~~v~~~I-----------~ 163 (262)
T 3nol_A 100 VGLTWKNGLGFVWNIRNLRQ-VRSFNYDG---EGWGLTHNDQYLIMS-DGTPVLRFLDPESLTPVRTI-----------T 163 (262)
T ss_dssp EEEESSSSEEEEEETTTCCE-EEEEECSS---CCCCEEECSSCEEEC-CSSSEEEEECTTTCSEEEEE-----------E
T ss_pred EEEEeeCCEEEEEECccCcE-EEEEECCC---CceEEecCCCEEEEE-CCCCeEEEEcCCCCeEEEEE-----------E
Confidence 66666799999999999776 66665322 223444677764544 45788999999886543331 1
Q ss_pred E-ecCcc-ccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecc---------cCCceeeeecCCCCcccc
Q psy4571 245 I-HGGHT-AKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIR---------SNGGISSTASPTASSTAS 313 (437)
Q Consensus 245 ~-~~~h~-~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~---------~~~~~~~~~s~~g~~l~s 313 (437)
. ..+.. ..++.+.|. +|. +.+..-.++.|.+.|..+++.+..+...... ......++++|++..|..
T Consensus 164 V~~~g~~~~~lNELe~~-~G~-lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfV 241 (262)
T 3nol_A 164 VTAHGEELPELNELEWV-DGE-IFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFV 241 (262)
T ss_dssp CEETTEECCCEEEEEEE-TTE-EEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEE
T ss_pred eccCCccccccceeEEE-CCE-EEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEE
Confidence 1 11111 335567776 665 6766667889999999999988888764221 112345699998776655
Q ss_pred cC
Q psy4571 314 ES 315 (437)
Q Consensus 314 ~s 315 (437)
.+
T Consensus 242 TG 243 (262)
T 3nol_A 242 TG 243 (262)
T ss_dssp EE
T ss_pred EC
Confidence 54
No 234
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.65 E-value=1.5e-06 Score=76.51 Aligned_cols=201 Identities=11% Similarity=0.088 Sum_probs=127.1
Q ss_pred eccccccCCC--cceEEeeCCCCCEEEEEEC--CCcEEEEEcCCCCCCCCeeeeccCC-CCeEEEEEeCCCCcEEEEEeC
Q psy4571 96 FTQNFPFPLS--RQDVAWHLLHESLFGSVAD--DQKLMIWDTRSHNVSKPSHTVDAHT-AEVNCLSFNPYSEYILATGSA 170 (437)
Q Consensus 96 ~~~~~~~~~~--v~~~~~sp~~~~~l~~~~~--dg~v~vwd~~~~~~~~~~~~~~~h~-~~v~~l~~~~~~~~~l~sgs~ 170 (437)
..+.+++... ...++|+|+ +.++++.+. ++.|+++|+. ..+.+..+.-.. .....+++. +..+.++.-.
T Consensus 11 vv~~~p~~~~~f~~Gl~~~~d-g~Lyvstg~~~~s~v~~iD~~---tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~ 84 (266)
T 2iwa_A 11 VLNEFPHDPYAFTQGLVYAEN-DTLFESTGLYGRSSVRQVALQ---TGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWL 84 (266)
T ss_dssp EEEEEECCTTCCEEEEEECST-TEEEEEECSTTTCEEEEEETT---TCCEEEEEECCTTCCEEEEEEE--TTEEEEEETT
T ss_pred EEEEEECCCCCCcccEEEeCC-CeEEEECCCCCCCEEEEEECC---CCCEEEEEecCCCcceEEEEEe--CCEEEEEEec
Confidence 3444555543 478999984 555554443 5799999999 455555543211 122345555 5556666667
Q ss_pred CCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEec-Cc
Q psy4571 171 DKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHG-GH 249 (437)
Q Consensus 171 dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~-~h 249 (437)
++.+.++|..+.+. +.++..-... ...++++|+.++++ ..++.|.++|..+.+..... ..-. +.
T Consensus 85 ~~~v~viD~~t~~v-~~~i~~g~~~--g~glt~Dg~~l~vs-~gs~~l~viD~~t~~v~~~I-----------~Vg~~~~ 149 (266)
T 2iwa_A 85 KNIGFIYDRRTLSN-IKNFTHQMKD--GWGLATDGKILYGS-DGTSILYEIDPHTFKLIKKH-----------NVKYNGH 149 (266)
T ss_dssp CSEEEEEETTTTEE-EEEEECCSSS--CCEEEECSSSEEEE-CSSSEEEEECTTTCCEEEEE-----------ECEETTE
T ss_pred CCEEEEEECCCCcE-EEEEECCCCC--eEEEEECCCEEEEE-CCCCeEEEEECCCCcEEEEE-----------EECCCCc
Confidence 89999999998665 5565422111 24466788875554 46889999999886543331 1110 11
Q ss_pred -cccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecc----------cCCceeeeecCCCC-cccccCCC
Q psy4571 250 -TAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIR----------SNGGISSTASPTAS-STASESPT 317 (437)
Q Consensus 250 -~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~----------~~~~~~~~~s~~g~-~l~s~s~d 317 (437)
-...+.+.|. +|. +.+....++.|.+-|..+++.+..+...... ......++++|+++ +++++...
T Consensus 150 p~~~~nele~~-dg~-lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~ 227 (266)
T 2iwa_A 150 RVIRLNELEYI-NGE-VWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLW 227 (266)
T ss_dssp ECCCEEEEEEE-TTE-EEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTC
T ss_pred ccccceeEEEE-CCE-EEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCC
Confidence 1236778887 665 7767667899999999999998888764211 12345679999986 45555555
Q ss_pred Cc
Q psy4571 318 PT 319 (437)
Q Consensus 318 ~~ 319 (437)
+.
T Consensus 228 ~~ 229 (266)
T 2iwa_A 228 PK 229 (266)
T ss_dssp SE
T ss_pred Ce
Confidence 55
No 235
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.64 E-value=3.1e-07 Score=89.20 Aligned_cols=234 Identities=9% Similarity=0.042 Sum_probs=135.6
Q ss_pred CCEEEEEECCCcEEEEEcCCCCCCCCeeeec-cCCCCeEEEEE-e-CCCCcEEEEE-----------------eCCCeEE
Q psy4571 116 ESLFGSVADDQKLMIWDTRSHNVSKPSHTVD-AHTAEVNCLSF-N-PYSEYILATG-----------------SADKTVA 175 (437)
Q Consensus 116 ~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~-~h~~~v~~l~~-~-~~~~~~l~sg-----------------s~dg~i~ 175 (437)
..+++....++.|.+.|+. ..+....+. ........+++ + |++.++++++ -.++.+.
T Consensus 102 ~~lfVnd~~~~rVavIdl~---t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vt 178 (595)
T 1fwx_A 102 RFLFMNDKANTRVARVRCD---VMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT 178 (595)
T ss_dssp EEEEEEETTTTEEEEEETT---TTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEE
T ss_pred CEEEEEcCCCCEEEEEECC---CceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEE
Confidence 3445555556679999999 444444222 12235788888 5 9999844443 2356899
Q ss_pred EEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCC--------------CeEEEEEcCCCCCCC---------CC
Q psy4571 176 LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTD--------------RRLHVWDLSKIGEEQ---------ST 232 (437)
Q Consensus 176 lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~d--------------g~i~vwd~~~~~~~~---------~~ 232 (437)
+.|..+.+. ..++.--. ....++++|+|+++++++... ..|.+.|........ ..
T Consensus 179 vID~~t~~v-~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V 256 (595)
T 1fwx_A 179 AVDADKWEV-AWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGV 256 (595)
T ss_dssp EEETTTTEE-EEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTE
T ss_pred EEECCCCeE-EEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcE
Confidence 999998655 44444222 346788999999755554332 224444432211000 00
Q ss_pred C--CCCCCCCce-EEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCC--------ceeeeeeecccCCcee
Q psy4571 233 E--DAEDGPPEL-LFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSD--------TKTMRLDSIRSNGGIS 301 (437)
Q Consensus 233 ~--~~~~~~~~~-~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~--------~~~~~~~~~~~~~~~~ 301 (437)
. ......... +..... .....++.++|||+++++++..+.+|.++|+.+.+. ...+........++..
T Consensus 257 ~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h 335 (595)
T 1fwx_A 257 KVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLH 335 (595)
T ss_dssp EEEECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEE
T ss_pred EEEeCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcce
Confidence 0 000000001 111111 123467899999998898888999999999996421 1111112223457788
Q ss_pred eeecCCCCcccccCCCCcccccccccccccccccchhh----------hhhhhhcCCC-----ccccccCCCCCCccccc
Q psy4571 302 STASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVC----------EEQRQLLGTE-----EESSDRHSSDNDTEDLN 366 (437)
Q Consensus 302 ~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~----------~~~~~~~~h~-----~~~~~~~~~~~~~~~~~ 366 (437)
.+|+|+|....+..-++. +.+||+.++ +.+.++..|. ........+|||+.+.+
T Consensus 336 ~aF~~dG~aY~t~~ldsq-----------V~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~ 404 (595)
T 1fwx_A 336 TAFDGRGNAYTSLFLDSQ-----------VVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVC 404 (595)
T ss_dssp EEECTTSEEEEEETTTTE-----------EEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEE
T ss_pred EEECCCCeEEEEEecCCc-----------EEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEE
Confidence 899999954455556666 777888773 3444554443 33456678889886554
No 236
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.63 E-value=9.5e-06 Score=82.36 Aligned_cols=244 Identities=11% Similarity=0.022 Sum_probs=144.5
Q ss_pred cceEEEeeccCceEeeecCCCceeEEEecC-C--------------CCeEEEe-------cCceEEEEEeeecccc-cc-
Q psy4571 47 DDAVEERVINEEYKIWKKNTPFLYDLVVNN-Y--------------VANISCI-------LNISILFFEIIFTQNF-PF- 102 (437)
Q Consensus 47 ~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~-~--------------~~~i~~~-------~~~~i~~~~~~~~~~~-~~- 102 (437)
+.+++.++.|+.+..+|..++.+.-..... . ...+.+. .++.|..+|...++.. .+
T Consensus 121 ~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 121 KGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEec
Confidence 567888889999999998776654222111 0 1222221 2467888886554421 00
Q ss_pred --C-------------------------------CCcceEEeeCCCCCEEEEEECCCc-------------------EEE
Q psy4571 103 --P-------------------------------LSRQDVAWHLLHESLFGSVADDQK-------------------LMI 130 (437)
Q Consensus 103 --~-------------------------------~~v~~~~~sp~~~~~l~~~~~dg~-------------------v~v 130 (437)
+ ..-..++++| ..++++.++.++. |..
T Consensus 201 ~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~-~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~A 279 (689)
T 1yiq_A 201 TVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDP-ELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVA 279 (689)
T ss_dssp SSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEET-TTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEE
T ss_pred ccCCCcccccccccccccccccCCceeeecCCCCccccceeEcC-CCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEE
Confidence 0 0112578888 4677778877763 999
Q ss_pred EEcCCCCCCCCeeeecc--CC-------CCeEEEEEeCCCC--cEEEEEeCCCeEEEEeCCCCceeeeEec-cC------
Q psy4571 131 WDTRSHNVSKPSHTVDA--HT-------AEVNCLSFNPYSE--YILATGSADKTVALWDLRNLKLKLHSFE-SH------ 192 (437)
Q Consensus 131 wd~~~~~~~~~~~~~~~--h~-------~~v~~l~~~~~~~--~~l~sgs~dg~i~lwd~~~~~~~~~~~~-~h------ 192 (437)
+|.++ ++.+..++. |. .++.......+|. ..++.++.+|.+.++|.++++. +.... ..
T Consensus 280 lD~~T---G~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~-l~~~~~~~~~w~~~ 355 (689)
T 1yiq_A 280 VNADT---GEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGEL-LSAKGIVPQSWTKG 355 (689)
T ss_dssp EETTT---CCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCE-EEEEESSCCSSEEE
T ss_pred EEccC---CceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCE-eccccccccccccc
Confidence 99984 455544432 21 1222222223443 2488999999999999999775 32111 00
Q ss_pred ---------------------CC-----------ceEEEEEcCCCCcEEEEEeC--------------------------
Q psy4571 193 ---------------------KD-----------EIFQVQWSPHNETILASSGT-------------------------- 214 (437)
Q Consensus 193 ---------------------~~-----------~v~~v~~~p~~~~~l~sg~~-------------------------- 214 (437)
.. .-..++++|+.. ++++...
T Consensus 356 ~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~-~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 434 (689)
T 1yiq_A 356 MDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTG-LVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGL 434 (689)
T ss_dssp EETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTT-EEEEEEEECCEEEECCSSCCCCCSCTTSCCCSS
T ss_pred cCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCC-EEEEeccccceeeeeccccccccccccccccCc
Confidence 00 011368888877 4555422
Q ss_pred -------------------CCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeE
Q psy4571 215 -------------------DRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIM 275 (437)
Q Consensus 215 -------------------dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i 275 (437)
+|.|..||+.+++. +.....+. .+..-.+...+. +++.++.||.+
T Consensus 435 ~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~--------------~W~~~~~~-~~~~g~~~tagg-lvf~gt~dg~l 498 (689)
T 1yiq_A 435 RTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQA--------------AWEVPYVT-IFNGGTLSTAGN-LVFEGSADGRV 498 (689)
T ss_dssp EECCCCSSHHHHHHHHTTCEEEEEEEETTTTEE--------------EEEEEESS-SCCCCEEEETTT-EEEEECTTSEE
T ss_pred cccccCcccccCCCCCCCcceeEEEEECCCCCe--------------EeEccCCC-CccCccceECCC-EEEEECCCCcE
Confidence 36688888877643 22232222 222234555677 78889999999
Q ss_pred EEEeCCCCCCceeeeeeecccCCceeeeecCCCC-ccccc
Q psy4571 276 QEYCDSTDSDTKTMRLDSIRSNGGISSTASPTAS-STASE 314 (437)
Q Consensus 276 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~-~l~s~ 314 (437)
+.||.++|+.+..+..... .....+.++.+|+ ++++.
T Consensus 499 ~a~D~~tG~~lw~~~~~~~--~~~~p~ty~~~G~qyv~~~ 536 (689)
T 1yiq_A 499 IAYAADTGEKLWEQPAASG--VMAAPVTYSVDGEQYVTFM 536 (689)
T ss_dssp EEEETTTCCEEEEEECSSC--CCSCCEEEEETTEEEEEEE
T ss_pred EEEECCCCccceeeeCCCC--cccCceEEEECCEEEEEEE
Confidence 9999999999888775321 1223356678887 44433
No 237
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.62 E-value=5.4e-07 Score=87.54 Aligned_cols=220 Identities=9% Similarity=-0.007 Sum_probs=133.7
Q ss_pred cCceEEEEEeeecc-----ccccCCCcceEEe-e-CCCCCEEEEEE------------------CCCcEEEEEcCCCCCC
Q psy4571 85 LNISILFFEIIFTQ-----NFPFPLSRQDVAW-H-LLHESLFGSVA------------------DDQKLMIWDTRSHNVS 139 (437)
Q Consensus 85 ~~~~i~~~~~~~~~-----~~~~~~~v~~~~~-s-p~~~~~l~~~~------------------~dg~v~vwd~~~~~~~ 139 (437)
.+..|.+.|+...+ .++.......+++ + | ++.++++++ .++.+.+.|.+ ..
T Consensus 110 ~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p-~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~---t~ 185 (595)
T 1fwx_A 110 ANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWP-RSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDAD---KW 185 (595)
T ss_dssp TTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSS-BCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETT---TT
T ss_pred CCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecC-CCcEEEEecccccccCCCCcccccccccCceEEEEECC---CC
Confidence 34567777755433 3334456788888 4 8 566666663 34578899998 44
Q ss_pred CCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCC--------------------------------------eEEEEeCCC
Q psy4571 140 KPSHTVDAHTAEVNCLSFNPYSEYILATGSADK--------------------------------------TVALWDLRN 181 (437)
Q Consensus 140 ~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg--------------------------------------~i~lwd~~~ 181 (437)
+...++.--. ....++++|+|++ +++.+.+. .|.+.|.++
T Consensus 186 ~v~~qI~Vgg-~pd~~~~spdGk~-~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~ 263 (595)
T 1fwx_A 186 EVAWQVLVSG-NLDNCDADYEGKW-AFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRK 263 (595)
T ss_dssp EEEEEEEESS-CCCCEEECSSSSE-EEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSG
T ss_pred eEEEEEEeCC-CccceEECCCCCE-EEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcc
Confidence 5554443212 3456789999997 55555332 366667765
Q ss_pred --CceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCC-ceEEEecCccccEEEEEE
Q psy4571 182 --LKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPP-ELLFIHGGHTAKISDFSW 258 (437)
Q Consensus 182 --~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~-~~~~~~~~h~~~v~~l~~ 258 (437)
++..+..+.. .....++.++|||+++++++..+.+|.++|+.+...... ....+. ..+... .-......++|
T Consensus 264 ~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~---~~l~~~~~v~~~v-~vG~gP~h~aF 338 (595)
T 1fwx_A 264 EASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFY---ENADPRSAVVAEP-ELGLGPLHTAF 338 (595)
T ss_dssp GGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHH---SCCCGGGGEEECC-BCCSCEEEEEE
T ss_pred cCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccc---cccCcccceEEEc-CCCCCcceEEE
Confidence 2221222321 234578999999999888888899999999986421000 000000 111112 22345788999
Q ss_pred ccCCCeEEEEEeCCCeEEEEeCCC----------CCCceeeeeee--cccCCceeeeecCCCCcccccCC
Q psy4571 259 NPNEPWVICSVSEDNIMQEYCDST----------DSDTKTMRLDS--IRSNGGISSTASPTASSTASESP 316 (437)
Q Consensus 259 ~p~~~~~l~s~~~dg~i~iwd~~~----------~~~~~~~~~~~--~~~~~~~~~~~s~~g~~l~s~s~ 316 (437)
+|+| +..++.-.|+.|..||+.+ .+.+..+.... .|.........+|||++|++...
T Consensus 339 ~~dG-~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk 407 (595)
T 1fwx_A 339 DGRG-NAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSK 407 (595)
T ss_dssp CTTS-EEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEES
T ss_pred CCCC-eEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCC
Confidence 9999 6888889999999999987 33333433321 11112233377999999988743
No 238
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.61 E-value=1.2e-05 Score=70.76 Aligned_cols=197 Identities=10% Similarity=0.015 Sum_probs=128.5
Q ss_pred EEEEeeCCCcceEEEeec--cCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeCCC
Q psy4571 38 YRLCVAEPFDDAVEERVI--NEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHLLH 115 (437)
Q Consensus 38 ~~~~~~~~~~~~l~tgs~--d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp~~ 115 (437)
.-+.|+ +++.++++.+. +..|++.|..++.+......+... ....+++. +
T Consensus 24 ~Gl~~~-~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~-------------------------fgeGi~~~--g 75 (266)
T 2iwa_A 24 QGLVYA-ENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSY-------------------------FGEGLTLL--N 75 (266)
T ss_dssp EEEEEC-STTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTC-------------------------CEEEEEEE--T
T ss_pred ccEEEe-CCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCc-------------------------ceEEEEEe--C
Confidence 446777 66655555443 467888888877776654322211 11134444 3
Q ss_pred CCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEecc--CC
Q psy4571 116 ESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFES--HK 193 (437)
Q Consensus 116 ~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~--h~ 193 (437)
+.++++.-.++.+.++|.. ..+.+..+...... ...++++|.. ++++..++.|.++|..+.+. ...+.. ..
T Consensus 76 ~~lyv~t~~~~~v~viD~~---t~~v~~~i~~g~~~--g~glt~Dg~~-l~vs~gs~~l~viD~~t~~v-~~~I~Vg~~~ 148 (266)
T 2iwa_A 76 EKLYQVVWLKNIGFIYDRR---TLSNIKNFTHQMKD--GWGLATDGKI-LYGSDGTSILYEIDPHTFKL-IKKHNVKYNG 148 (266)
T ss_dssp TEEEEEETTCSEEEEEETT---TTEEEEEEECCSSS--CCEEEECSSS-EEEECSSSEEEEECTTTCCE-EEEEECEETT
T ss_pred CEEEEEEecCCEEEEEECC---CCcEEEEEECCCCC--eEEEEECCCE-EEEECCCCeEEEEECCCCcE-EEEEEECCCC
Confidence 5666667778999999998 45566666422111 2335668887 55555789999999998665 444332 11
Q ss_pred ---CceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecC-----------ccccEEEEEEc
Q psy4571 194 ---DEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGG-----------HTAKISDFSWN 259 (437)
Q Consensus 194 ---~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~-----------h~~~v~~l~~~ 259 (437)
..++.+.|. ++. +++....++.|.+.|..+++...... +.+ -....+.|+|+
T Consensus 149 ~p~~~~nele~~-dg~-lyvn~~~~~~V~vID~~tg~V~~~I~------------~~g~~~~~~~~~~~~~~v~nGIa~~ 214 (266)
T 2iwa_A 149 HRVIRLNELEYI-NGE-VWANIWQTDCIARISAKDGTLLGWIL------------LPNLRKKLIDEGFRDIDVLNGIAWD 214 (266)
T ss_dssp EECCCEEEEEEE-TTE-EEEEETTSSEEEEEETTTCCEEEEEE------------CHHHHHHHHHTTCTTCCCEEEEEEE
T ss_pred cccccceeEEEE-CCE-EEEecCCCCeEEEEECCCCcEEEEEE------------CCCcccccccccccccCceEEEEEc
Confidence 136778888 664 66666678899999999986544321 111 01356899999
Q ss_pred cCCCeEEEEEeCCCeEEEEeCCCC
Q psy4571 260 PNEPWVICSVSEDNIMQEYCDSTD 283 (437)
Q Consensus 260 p~~~~~l~s~~~dg~i~iwd~~~~ 283 (437)
|+++.+++++...+.+...++...
T Consensus 215 ~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 215 QENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp TTTTEEEEEETTCSEEEEEEEEEC
T ss_pred CCCCEEEEECCCCCeEEEEEEecc
Confidence 999989999999999999888754
No 239
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.61 E-value=3.1e-05 Score=70.67 Aligned_cols=213 Identities=10% Similarity=-0.010 Sum_probs=126.0
Q ss_pred CcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCC-CCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCc
Q psy4571 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNV-SKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLK 183 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~-~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~ 183 (437)
.+..++|++.++.++.+-..++.|..+++..... ......+.........+++++.+..+.++-...+.|.+.+++...
T Consensus 31 ~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~ 110 (316)
T 1ijq_A 31 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK 110 (316)
T ss_dssp SEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSS
T ss_pred ceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCc
Confidence 4568999986566666666678999999874110 111222222223567899998777656666778999999987533
Q ss_pred eeeeEeccCCCceEEEEEcCCCCcEEEEEeCC-CeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCC
Q psy4571 184 LKLHSFESHKDEIFQVQWSPHNETILASSGTD-RRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNE 262 (437)
Q Consensus 184 ~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~d-g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~ 262 (437)
. .............+++.|.+.+++++.... +.|...++..... +.+ ....-.....|+++|++
T Consensus 111 ~-~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~------------~~~--~~~~~~~P~gla~d~~~ 175 (316)
T 1ijq_A 111 R-KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI------------YSL--VTENIQWPNGITLDLLS 175 (316)
T ss_dssp E-EEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCE------------EEE--ECSSCSCEEEEEEETTT
T ss_pred e-EEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCe------------EEE--EECCCCCceEEEEeccC
Confidence 2 222222335678999999777666665443 7888888764321 001 11223467899999988
Q ss_pred CeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhh
Q psy4571 263 PWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQ 342 (437)
Q Consensus 263 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~ 342 (437)
..+.++-+..+.|..+|+... ..+.+.........+..+++. .+.+..+....+. |..+|..+|+.+
T Consensus 176 ~~lY~~D~~~~~I~~~d~dg~-~~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~-----------V~~~~~~~g~~~ 242 (316)
T 1ijq_A 176 GRLYWVDSKLHSISSIDVNGG-NRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEA-----------IFSANRLTGSDV 242 (316)
T ss_dssp TEEEEEETTTTEEEEEETTSC-SCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTE-----------EEEEETTTCCCC
T ss_pred CEEEEEECCCCeEEEEecCCC-ceEEEeecCCccCCcEEEEEE-CCEEEEEECCCCe-----------EEEEeCCCCcce
Confidence 867777778889999999743 333332211111223344553 3444444444444 555565566554
Q ss_pred hhh
Q psy4571 343 RQL 345 (437)
Q Consensus 343 ~~~ 345 (437)
..+
T Consensus 243 ~~i 245 (316)
T 1ijq_A 243 NLL 245 (316)
T ss_dssp EEE
T ss_pred EEE
Confidence 444
No 240
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.60 E-value=1.6e-05 Score=80.43 Aligned_cols=242 Identities=9% Similarity=-0.023 Sum_probs=145.8
Q ss_pred cceEEEeeccCceEeeecCCCceeEEEecC-C--------------CCeEEEec-------CceEEEEEeeecccc---c
Q psy4571 47 DDAVEERVINEEYKIWKKNTPFLYDLVVNN-Y--------------VANISCIL-------NISILFFEIIFTQNF---P 101 (437)
Q Consensus 47 ~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~-~--------------~~~i~~~~-------~~~i~~~~~~~~~~~---~ 101 (437)
+..++.++.|+.+..+|..++.+.-..-.. . ...+.... ++.|..+|...++.. .
T Consensus 128 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~ 207 (677)
T 1kb0_A 128 KGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWF 207 (677)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEec
Confidence 567888888999999998776654322222 0 12222221 577888886554422 1
Q ss_pred cC---------------------------------CCcceEEeeCCCCCEEEEEECCC-------------------cEE
Q psy4571 102 FP---------------------------------LSRQDVAWHLLHESLFGSVADDQ-------------------KLM 129 (437)
Q Consensus 102 ~~---------------------------------~~v~~~~~sp~~~~~l~~~~~dg-------------------~v~ 129 (437)
.. .....++++| ..++++.+..++ .|.
T Consensus 208 ~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~-~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~ 286 (677)
T 1kb0_A 208 SVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDA-ELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIV 286 (677)
T ss_dssp SSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEET-TTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEE
T ss_pred cCCCCccccccccccccccccccccCceeEeCCCcccccceeEcC-CCCEEEEECCCCccccCCCCCccCCCCeeeEEEE
Confidence 00 0113578888 466777776654 488
Q ss_pred EEEcCCCCCCCCeeeecc--CC-------CCeEEEEEeCCCC--cEEEEEeCCCeEEEEeCCCCceeeeEeccCC-----
Q psy4571 130 IWDTRSHNVSKPSHTVDA--HT-------AEVNCLSFNPYSE--YILATGSADKTVALWDLRNLKLKLHSFESHK----- 193 (437)
Q Consensus 130 vwd~~~~~~~~~~~~~~~--h~-------~~v~~l~~~~~~~--~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~----- 193 (437)
.+|.++ ++.+..++. |. ....-+....+|+ ..++.++.+|.+.++|.++++. +.......
T Consensus 287 AlD~~T---G~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~-l~~~~~~~~~~~~ 362 (677)
T 1kb0_A 287 ALDPDT---GKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKF-ISAKNFVPVNWAS 362 (677)
T ss_dssp EECTTT---CCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCE-EEEEESSCCSSEE
T ss_pred EEECCC---CCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCE-eccccccccCccc
Confidence 899884 454444332 21 1222334444662 3589999999999999999776 43332110
Q ss_pred ------Cce------------------------EEEEEcCCCCcEEEEEeC-----------------------------
Q psy4571 194 ------DEI------------------------FQVQWSPHNETILASSGT----------------------------- 214 (437)
Q Consensus 194 ------~~v------------------------~~v~~~p~~~~~l~sg~~----------------------------- 214 (437)
.++ ..++++|++.. +++...
T Consensus 363 ~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~-~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 441 (677)
T 1kb0_A 363 GYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGL-VYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWN 441 (677)
T ss_dssp EECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTE-EEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCC
T ss_pred ccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCE-EEEeChhcceeeecccccccccccccccccccccc
Confidence 111 15688898774 555432
Q ss_pred --------------CCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeC
Q psy4571 215 --------------DRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCD 280 (437)
Q Consensus 215 --------------dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~ 280 (437)
.|.|..||+.+++.. .... +..++....+...+. +++.++.||.+++||.
T Consensus 442 ~g~~~~~~~~~~~~~g~l~A~D~~tG~~~--------------W~~~-~~~~~~~g~~~~~g~-~v~~g~~dg~l~a~D~ 505 (677)
T 1kb0_A 442 TAKFFNAEPPKSKPFGRLLAWDPVAQKAA--------------WSVE-HVSPWNGGTLTTAGN-VVFQGTADGRLVAYHA 505 (677)
T ss_dssp CCEEECSSCCCSCCEEEEEEEETTTTEEE--------------EEEE-ESSSCCCCEEEETTT-EEEEECTTSEEEEEET
T ss_pred cccccccccCCCCCccEEEEEeCCCCcEE--------------eecC-CCCCCcCcceEeCCC-EEEEECCCCcEEEEEC
Confidence 267888888876432 2222 222334445666777 6778899999999999
Q ss_pred CCCCCceeeeeeecccCCceeeeecCCCCccc
Q psy4571 281 STDSDTKTMRLDSIRSNGGISSTASPTASSTA 312 (437)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~ 312 (437)
++++.+..+.... ......+.++++|+..+
T Consensus 506 ~tG~~lw~~~~~~--~~~~~p~~y~~~G~~~v 535 (677)
T 1kb0_A 506 ATGEKLWEAPTGT--GVVAAPSTYMVDGRQYV 535 (677)
T ss_dssp TTCCEEEEEECSS--CCCSCCEEEEETTEEEE
T ss_pred CCCceeeeeeCCC--CcccCCEEEEeCCEEEE
Confidence 9999988887532 12223345668886433
No 241
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.56 E-value=4.7e-05 Score=70.48 Aligned_cols=162 Identities=9% Similarity=0.037 Sum_probs=109.8
Q ss_pred CCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCc
Q psy4571 104 LSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLK 183 (437)
Q Consensus 104 ~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~ 183 (437)
..+..++|++.++.++.+-...+.|..+++... ...............+++.+.+..++++-...+.|.+.+++...
T Consensus 73 ~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~---~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~ 149 (349)
T 3v64_C 73 ENAIALDFHHRRELVFWSDVTLDRILRANLNGS---NVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAH 149 (349)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSC---SCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred CceEEEEEeccccEEEEEeccCCceEEEecCCC---CceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCc
Confidence 346789999866666666667788999998732 22222222233467899998777666777778899999988643
Q ss_pred eeeeEeccCCCceEEEEEcCCCCcEEEEEeCC-CeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCC
Q psy4571 184 LKLHSFESHKDEIFQVQWSPHNETILASSGTD-RRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNE 262 (437)
Q Consensus 184 ~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~d-g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~ 262 (437)
. .......-.....+++.|.+..++.+-..+ +.|...++........ ....-.....|+++|++
T Consensus 150 ~-~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~--------------~~~~~~~PnGla~d~~~ 214 (349)
T 3v64_C 150 R-KVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRII--------------ADTHLFWPNGLTIDYAG 214 (349)
T ss_dssp C-EEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEES--------------CCSSCSCEEEEEEETTT
T ss_pred e-EEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEE--------------EECCCCCcceEEEeCCC
Confidence 2 222323335578999999777667776666 7899988875322110 11223357899999988
Q ss_pred CeEEEEEeCCCeEEEEeCCCC
Q psy4571 263 PWVICSVSEDNIMQEYCDSTD 283 (437)
Q Consensus 263 ~~~l~s~~~dg~i~iwd~~~~ 283 (437)
..+.++-...+.|..+|+...
T Consensus 215 ~~lY~aD~~~~~I~~~~~dG~ 235 (349)
T 3v64_C 215 RRMYWVDAKHHVIERANLDGS 235 (349)
T ss_dssp TEEEEEETTTTEEEEEETTSC
T ss_pred CEEEEEECCCCEEEEEeCCCC
Confidence 767777778889999998753
No 242
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.55 E-value=1.7e-05 Score=74.62 Aligned_cols=233 Identities=10% Similarity=0.008 Sum_probs=137.5
Q ss_pred eEEEecCceEEEEEeeeccc---cccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEE
Q psy4571 80 NISCILNISILFFEIIFTQN---FPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLS 156 (437)
Q Consensus 80 ~i~~~~~~~i~~~~~~~~~~---~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~ 156 (437)
.+.......|+..++..... ..-...+..++|++.++.++.+-...+.|..+++... .....+.........++
T Consensus 89 ~l~~~~~~~I~~i~~~~~~~~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~---~~~~~~~~~~~~p~gla 165 (386)
T 3v65_B 89 VLLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGS---NVEEVVSTGLESPGGLA 165 (386)
T ss_dssp EEEEECBSCEEEECTTSCCCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC---CEEEEECSSCSCCCCEE
T ss_pred eeEeecCccceeeccCCCcEEEEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCC---CcEEEEeCCCCCccEEE
Confidence 34444444555555432211 1123457789999866666666667788999998732 22222222233456789
Q ss_pred EeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCC-CeEEEEEcCCCCCCCCCCCC
Q psy4571 157 FNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTD-RRLHVWDLSKIGEEQSTEDA 235 (437)
Q Consensus 157 ~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~d-g~i~vwd~~~~~~~~~~~~~ 235 (437)
+.+.+..++++-...+.|.+.+++.... .............+++.|.+..++++-..+ +.|..+++......
T Consensus 166 vd~~~g~lY~~d~~~~~I~~~~~dg~~~-~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~------ 238 (386)
T 3v65_B 166 VDWVHDKLYWTDSGTSRIEVANLDGAHR-KVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRR------ 238 (386)
T ss_dssp EETTTTEEEEEETTTTEEEECBTTSCSC-EEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE------
T ss_pred EEeCCCeEEEEcCCCCeEEEEeCCCCce-EEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcE------
Confidence 9987776667777788999999875332 222333335678999999877666666555 78888888653211
Q ss_pred CCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccC
Q psy4571 236 EDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASES 315 (437)
Q Consensus 236 ~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s 315 (437)
......-.....|+++|++..+.++-+..+.|..+|+... ....+... ....+..+++ ..+.++.+..
T Consensus 239 --------~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~-~~~~~~~~--~~~~P~giav-~~~~ly~td~ 306 (386)
T 3v65_B 239 --------IIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGS-HRKAVISQ--GLPHPFAITV-FEDSLYWTDW 306 (386)
T ss_dssp --------EEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSC-SCEEEECS--SCSSEEEEEE-ETTEEEEEET
T ss_pred --------EEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCC-eeEEEEEC--CCCCceEEEE-ECCEEEEeeC
Confidence 1111223357899999888767777778899999998753 22322211 1122334455 3344444444
Q ss_pred CCCcccccccccccccccccchhhhhhhhh
Q psy4571 316 PTPTNSVHEKNYWQGLVLFDILVCEEQRQL 345 (437)
Q Consensus 316 ~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~ 345 (437)
..+. |..+|..+|+....+
T Consensus 307 ~~~~-----------V~~~~~~~G~~~~~i 325 (386)
T 3v65_B 307 HTKS-----------INSANKFTGKNQEII 325 (386)
T ss_dssp TTTE-----------EEEEETTTCCSCEEE
T ss_pred CCCe-----------EEEEECCCCcceEEE
Confidence 4444 455555556555444
No 243
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.54 E-value=2.6e-06 Score=74.18 Aligned_cols=192 Identities=10% Similarity=0.074 Sum_probs=121.6
Q ss_pred cccccCCC--cceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEE
Q psy4571 98 QNFPFPLS--RQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVA 175 (437)
Q Consensus 98 ~~~~~~~~--v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~ 175 (437)
+.+++... ...+.|+. +.++.+.+.+|.|+++|++++ +.+... - ..........+++..+....-.++.+.
T Consensus 47 ~~~phd~~~ftqGL~~~~--~~Ly~stG~~g~v~~iD~~Tg---kv~~~~-l-~~~~FgeGit~~g~~Ly~ltw~~~~v~ 119 (268)
T 3nok_A 47 REYPHATNAFTQGLVFHQ--GHFFESTGHQGTLRQLSLESA---QPVWME-R-LGNIFAEGLASDGERLYQLTWTEGLLF 119 (268)
T ss_dssp EEEECCTTCCEEEEEEET--TEEEEEETTTTEEEECCSSCS---SCSEEE-E-CTTCCEEEEEECSSCEEEEESSSCEEE
T ss_pred EEEcCCCccccceEEEEC--CEEEEEcCCCCEEEEEECCCC---cEEeEE-C-CCCcceeEEEEeCCEEEEEEccCCEEE
Confidence 34455443 36788874 678888888999999999954 444444 1 122323222334555666667799999
Q ss_pred EEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCcc---cc
Q psy4571 176 LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHT---AK 252 (437)
Q Consensus 176 lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~---~~ 252 (437)
++|.++.+. +.++..- ..-..+ .++++. |+.+..++.|.++|..+.+..... . ...+. ..
T Consensus 120 V~D~~Tl~~-~~ti~~~-~eGwGL--t~Dg~~-L~vSdGs~~l~~iDp~T~~v~~~I-----------~-V~~~g~~v~~ 182 (268)
T 3nok_A 120 TWSGMPPQR-ERTTRYS-GEGWGL--CYWNGK-LVRSDGGTMLTFHEPDGFALVGAV-----------Q-VKLRGQPVEL 182 (268)
T ss_dssp EEETTTTEE-EEEEECS-SCCCCE--EEETTE-EEEECSSSEEEEECTTTCCEEEEE-----------E-CEETTEECCC
T ss_pred EEECCcCcE-EEEEeCC-CceeEE--ecCCCE-EEEECCCCEEEEEcCCCCeEEEEE-----------E-eCCCCccccc
Confidence 999999765 6666532 222333 356775 444456889999999887544331 1 11111 24
Q ss_pred EEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecc---------c-CCceeeeecCCCCcccccC
Q psy4571 253 ISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIR---------S-NGGISSTASPTASSTASES 315 (437)
Q Consensus 253 v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~---------~-~~~~~~~~s~~g~~l~s~s 315 (437)
++.+.|. +|. +.+..-.++.|.+.|.++++.+..+...... . .....++++|++..|...+
T Consensus 183 lNeLe~~-dG~-lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 183 INELECA-NGV-IYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp EEEEEEE-TTE-EEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred ccccEEe-CCE-EEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 5677776 665 6766667889999999999998888764211 1 1234468999776555443
No 244
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.49 E-value=0.00018 Score=67.62 Aligned_cols=167 Identities=7% Similarity=-0.014 Sum_probs=110.8
Q ss_pred CcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCC-CeEEEEeCCCCc
Q psy4571 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSAD-KTVALWDLRNLK 183 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~d-g~i~lwd~~~~~ 183 (437)
....+++.+.++.++++-...+.|.+.+++.. .....+.........++++|.+.+++.+-... +.|...+++...
T Consensus 160 ~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~---~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~ 236 (386)
T 3v65_B 160 SPGGLAVDWVHDKLYWTDSGTSRIEVANLDGA---HRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG 236 (386)
T ss_dssp CCCCEEEETTTTEEEEEETTTTEEEECBTTSC---SCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS
T ss_pred CccEEEEEeCCCeEEEEcCCCCeEEEEeCCCC---ceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCC
Confidence 45688999866777777667788888888632 22222333345689999999888656665555 789999887533
Q ss_pred eeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCC
Q psy4571 184 LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEP 263 (437)
Q Consensus 184 ~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~ 263 (437)
. .......-.....++++|++..++++-...+.|..+|+...... .+ ..........|++ ..+
T Consensus 237 ~-~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~------------~~--~~~~~~~P~giav-~~~- 299 (386)
T 3v65_B 237 R-RIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRK------------AV--ISQGLPHPFAITV-FED- 299 (386)
T ss_dssp C-EEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCE------------EE--ECSSCSSEEEEEE-ETT-
T ss_pred c-EEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeE------------EE--EECCCCCceEEEE-ECC-
Confidence 2 22222233456899999887777777777888999998653211 11 1122334567777 333
Q ss_pred eEEEEEeCCCeEEEEeCCCCCCceeeee
Q psy4571 264 WVICSVSEDNIMQEYCDSTDSDTKTMRL 291 (437)
Q Consensus 264 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 291 (437)
.++++-...+.|..+|..+++....+..
T Consensus 300 ~ly~td~~~~~V~~~~~~~G~~~~~i~~ 327 (386)
T 3v65_B 300 SLYWTDWHTKSINSANKFTGKNQEIIRN 327 (386)
T ss_dssp EEEEEETTTTEEEEEETTTCCSCEEEEC
T ss_pred EEEEeeCCCCeEEEEECCCCcceEEEcc
Confidence 4777878889999999878877766653
No 245
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.48 E-value=0.00032 Score=64.88 Aligned_cols=165 Identities=7% Similarity=0.008 Sum_probs=110.5
Q ss_pred CcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCC-CeEEEEeCCCCc
Q psy4571 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSAD-KTVALWDLRNLK 183 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~d-g~i~lwd~~~~~ 183 (437)
....+++.+.++.++.+-...+.|.+.+++.. ...............++++|.+.+++.+-... +.|...+++...
T Consensus 117 ~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~---~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~ 193 (349)
T 3v64_C 117 SPGGLAVDWVHDKLYWTDSGTSRIEVANLDGA---HRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG 193 (349)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSC---SCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS
T ss_pred CccEEEEecCCCeEEEEcCCCCeEEEEcCCCC---ceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCC
Confidence 45789999866777777777789999998732 22222223345679999999877666666555 889999887533
Q ss_pred eeeeEe-ccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCC
Q psy4571 184 LKLHSF-ESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNE 262 (437)
Q Consensus 184 ~~~~~~-~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~ 262 (437)
. ..+ ...-.....++++|++..++++-...+.|..+|+...... .+ ....-....+|++ ..+
T Consensus 194 ~--~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~------------~~--~~~~~~~P~giav-~~~ 256 (349)
T 3v64_C 194 R--RIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRK------------AV--ISQGLPHPFAITV-FED 256 (349)
T ss_dssp C--EESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE------------EE--ECSSCSSEEEEEE-ETT
T ss_pred c--EEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceE------------EE--EeCCCCCceEEEE-ECC
Confidence 2 222 2223456899999988777777777889999998753211 11 1122334567777 334
Q ss_pred CeEEEEEeCCCeEEEEeCCCCCCceeee
Q psy4571 263 PWVICSVSEDNIMQEYCDSTDSDTKTMR 290 (437)
Q Consensus 263 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 290 (437)
.++++-...+.|...+..+++....+.
T Consensus 257 -~ly~td~~~~~V~~~~~~~G~~~~~i~ 283 (349)
T 3v64_C 257 -SLYWTDWHTKSINSANKFTGKNQEIIR 283 (349)
T ss_dssp -EEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred -EEEEecCCCCeEEEEEccCCCccEEec
Confidence 477777788999999977787766664
No 246
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.48 E-value=5.2e-06 Score=75.97 Aligned_cols=201 Identities=10% Similarity=-0.021 Sum_probs=118.3
Q ss_pred CCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCc
Q psy4571 116 ESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDE 195 (437)
Q Consensus 116 ~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~ 195 (437)
+..+..++.++.|..+|.. + +.......+...+.++...+++. +..++.++.|..+|.. ++. ...+......
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g---~~~~~~~~~~~~~~~~~~~~~g~--l~vgt~~~~l~~~d~~-g~~-~~~~~~~~~~ 178 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-G---TEKWRFKTKKAIYATPIVSEDGT--IYVGSNDNYLYAINPD-GTE-KWRFKTNDAI 178 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-S---CEEEEEECSSCCCSCCEECTTSC--EEEECTTSEEEEECTT-SCE-EEEEECSSCC
T ss_pred CCEEEEEecCCEEEEEcCC-C---CEEEEEcCCCceeeeeEEcCCCE--EEEEcCCCEEEEECCC-CCE-eEEEecCCCc
Confidence 3456678888999999976 2 23333333444566667777776 6778888999999998 554 4444444556
Q ss_pred eEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeE
Q psy4571 196 IFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIM 275 (437)
Q Consensus 196 v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i 275 (437)
+.++...+++. +..++ +.|..+| .++.. +.........+.++...++|. +..++.++.+
T Consensus 179 ~~~~~~d~~g~--l~v~t--~~l~~~d-~~g~~--------------~~~~~~~~~~~~~~~~~~~g~--l~v~t~~~gl 237 (330)
T 3hxj_A 179 TSAASIGKDGT--IYFGS--DKVYAIN-PDGTE--------------KWNFYAGYWTVTRPAISEDGT--IYVTSLDGHL 237 (330)
T ss_dssp CSCCEECTTCC--EEEES--SSEEEEC-TTSCE--------------EEEECCSSCCCSCCEECTTSC--EEEEETTTEE
T ss_pred eeeeEEcCCCE--EEEEe--CEEEEEC-CCCcE--------------EEEEccCCcceeceEECCCCe--EEEEcCCCeE
Confidence 77777877776 34444 7788998 54432 222333345577788888887 4456677888
Q ss_pred EEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCCcccccc
Q psy4571 276 QEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDR 355 (437)
Q Consensus 276 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~~~ 355 (437)
..+|. +++....+... ..........++|.+. .++.++. +..+|. +|+....+......+..+
T Consensus 238 ~~~~~-~g~~~~~~~~~---~~~~~~~~~~~~g~l~-v~t~~gg-----------l~~~d~-~g~~~~~~~~~~~~~~~~ 300 (330)
T 3hxj_A 238 YAINP-DGTEKWRFKTG---KRIESSPVIGNTDTIY-FGSYDGH-----------LYAINP-DGTEKWNFETGSWIIATP 300 (330)
T ss_dssp EEECT-TSCEEEEEECS---SCCCSCCEECTTSCEE-EECTTCE-----------EEEECT-TSCEEEEEECSSCCCSCC
T ss_pred EEECC-CCCEeEEeeCC---CCccccceEcCCCeEE-EecCCCC-----------EEEECC-CCcEEEEEEcCCccccce
Confidence 88874 45444443321 1112223445556544 4555544 455563 455444433333334444
Q ss_pred CCCCCCc
Q psy4571 356 HSSDNDT 362 (437)
Q Consensus 356 ~~~~~~~ 362 (437)
...++|.
T Consensus 301 ~~d~~g~ 307 (330)
T 3hxj_A 301 VIDENGT 307 (330)
T ss_dssp EECTTCC
T ss_pred EEcCCCE
Confidence 4445554
No 247
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.44 E-value=3.4e-05 Score=72.14 Aligned_cols=256 Identities=9% Similarity=-0.033 Sum_probs=140.9
Q ss_pred cceEEEeeccCceEeeecCCCcee-EEEecC------------------CCCeE-EEecCceEEEEEeeecccc---ccC
Q psy4571 47 DDAVEERVINEEYKIWKKNTPFLY-DLVVNN------------------YVANI-SCILNISILFFEIIFTQNF---PFP 103 (437)
Q Consensus 47 ~~~l~tgs~d~~v~iw~~~~~~~~-~~~~~~------------------~~~~i-~~~~~~~i~~~~~~~~~~~---~~~ 103 (437)
+..++.++.++.+..+|..++... ...... ....+ ....++.+..+|...++.. ...
T Consensus 53 ~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~ 132 (376)
T 3q7m_A 53 DNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKVA 132 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECS
T ss_pred CCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeCC
Confidence 567777777888888887655533 221110 01122 3345667777876544422 222
Q ss_pred CCcc-eEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCe-----EEEEEeCCCCcEEEEEeCCCeEEEE
Q psy4571 104 LSRQ-DVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEV-----NCLSFNPYSEYILATGSADKTVALW 177 (437)
Q Consensus 104 ~~v~-~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v-----~~l~~~~~~~~~l~sgs~dg~i~lw 177 (437)
..+. ..... +..+++++.++.|..+|..+ ++.+.......... ...... +. .++.++.++.|..+
T Consensus 133 ~~~~~~p~~~---~~~v~v~~~~g~l~~~d~~t---G~~~W~~~~~~~~~~~~~~~~~~~~--~~-~v~~g~~~g~l~~~ 203 (376)
T 3q7m_A 133 GEALSRPVVS---DGLVLIHTSNGQLQALNEAD---GAVKWTVNLDMPSLSLRGESAPTTA--FG-AAVVGGDNGRVSAV 203 (376)
T ss_dssp SCCCSCCEEE---TTEEEEECTTSEEEEEETTT---CCEEEEEECCC-----CCCCCCEEE--TT-EEEECCTTTEEEEE
T ss_pred CceEcCCEEE---CCEEEEEcCCCeEEEEECCC---CcEEEEEeCCCCceeecCCCCcEEE--CC-EEEEEcCCCEEEEE
Confidence 2221 12222 34677788899999999984 44444433221110 111222 33 37788889999999
Q ss_pred eCCCCceeeeEeccCCC-c---eE---EEEEcC--CCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecC
Q psy4571 178 DLRNLKLKLHSFESHKD-E---IF---QVQWSP--HNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGG 248 (437)
Q Consensus 178 d~~~~~~~~~~~~~h~~-~---v~---~v~~~p--~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (437)
|.++++. +........ . +. .+.-.| .+. .+..++.++.+..+|..+++.... ..
T Consensus 204 d~~tG~~-~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~v~~~~~~g~l~~~d~~tG~~~w~--------------~~- 266 (376)
T 3q7m_A 204 LMEQGQM-IWQQRISQATGSTEIDRLSDVDTTPVVVNG-VVFALAYNGNLTALDLRSGQIMWK--------------RE- 266 (376)
T ss_dssp ETTTCCE-EEEEECCC-----------CCCCCCEEETT-EEEEECTTSCEEEEETTTCCEEEE--------------EC-
T ss_pred ECCCCcE-EEEEecccCCCCcccccccccCCCcEEECC-EEEEEecCcEEEEEECCCCcEEee--------------cc-
Confidence 9998765 433321110 0 00 010111 133 366778899999999988753322 21
Q ss_pred ccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccc
Q psy4571 249 HTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYW 328 (437)
Q Consensus 249 h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~ 328 (437)
......+.. ++. .+..++.++.+..+|..+++....... ........... .+..+..++.++.
T Consensus 267 -~~~~~~~~~--~~~-~l~~~~~~g~l~~~d~~tG~~~w~~~~--~~~~~~~~~~~--~~~~l~v~~~~g~--------- 329 (376)
T 3q7m_A 267 -LGSVNDFIV--DGN-RIYLVDQNDRVMALTIDGGVTLWTQSD--LLHRLLTSPVL--YNGNLVVGDSEGY--------- 329 (376)
T ss_dssp -CCCEEEEEE--ETT-EEEEEETTCCEEEEETTTCCEEEEECT--TTTSCCCCCEE--ETTEEEEECTTSE---------
T ss_pred -CCCCCCceE--ECC-EEEEEcCCCeEEEEECCCCcEEEeecc--cCCCcccCCEE--ECCEEEEEeCCCe---------
Confidence 112333433 344 466778899999999999976544331 01111111122 3455666666776
Q ss_pred cccccccchhhhhhhhhcC
Q psy4571 329 QGLVLFDILVCEEQRQLLG 347 (437)
Q Consensus 329 ~~i~~wd~~~~~~~~~~~~ 347 (437)
+.++|..+|+.+.....
T Consensus 330 --l~~~d~~tG~~~~~~~~ 346 (376)
T 3q7m_A 330 --LHWINVEDGRFVAQQKV 346 (376)
T ss_dssp --EEEEETTTCCEEEEEEC
T ss_pred --EEEEECCCCcEEEEEec
Confidence 78888888887655543
No 248
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.44 E-value=7.2e-05 Score=67.83 Aligned_cols=200 Identities=8% Similarity=-0.026 Sum_probs=113.7
Q ss_pred CCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeC-CC-eEEEEeCC
Q psy4571 103 PLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSA-DK-TVALWDLR 180 (437)
Q Consensus 103 ~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~-dg-~i~lwd~~ 180 (437)
......++|+| ++.++++-..++.|..+|... .....+ .....+..+++.++|. ++++... ++ .|..+|..
T Consensus 31 ~~~pegia~~~-~g~lyv~d~~~~~I~~~d~~g----~~~~~~-~~~~~p~gia~~~dG~-l~vad~~~~~~~v~~~d~~ 103 (306)
T 2p4o_A 31 NTFLENLASAP-DGTIFVTNHEVGEIVSITPDG----NQQIHA-TVEGKVSGLAFTSNGD-LVATGWNADSIPVVSLVKS 103 (306)
T ss_dssp TCCEEEEEECT-TSCEEEEETTTTEEEEECTTC----CEEEEE-ECSSEEEEEEECTTSC-EEEEEECTTSCEEEEEECT
T ss_pred CCCcceEEECC-CCCEEEEeCCCCeEEEECCCC----ceEEEE-eCCCCceeEEEcCCCc-EEEEeccCCcceEEEEcCC
Confidence 35667899999 567777666789999998762 222222 2245688999999998 4555543 22 47677777
Q ss_pred CCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCC-CCCCCCCCCCCCceEEEecCccccEEEEEEc
Q psy4571 181 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGE-EQSTEDAEDGPPELLFIHGGHTAKISDFSWN 259 (437)
Q Consensus 181 ~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~-~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~ 259 (437)
+++.....-.........++..+.+ .++++...++.|.++|...+.. ....... .... ...+.-.....| +
T Consensus 104 ~g~~~~~~~~~~~~~~~g~~~~~~~-~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~-~~~~----~~~~~~~~pngi--s 175 (306)
T 2p4o_A 104 DGTVETLLTLPDAIFLNGITPLSDT-QYLTADSYRGAIWLIDVVQPSGSIWLEHPM-LARS----NSESVFPAANGL--K 175 (306)
T ss_dssp TSCEEEEEECTTCSCEEEEEESSSS-EEEEEETTTTEEEEEETTTTEEEEEEECGG-GSCS----STTCCSCSEEEE--E
T ss_pred CCeEEEEEeCCCccccCcccccCCC-cEEEEECCCCeEEEEeCCCCcEeEEEECCc-cccc----cccCCCCcCCCc--C
Confidence 6553111111112233555555554 3566655688999999765310 0000000 0000 000111234555 7
Q ss_pred cCCCeEEEEEeCCCeEEEEeCCC-CCCceeeeeeecccCCceeeeecCCCCcccccCCCCc
Q psy4571 260 PNEPWVICSVSEDNIMQEYCDST-DSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPT 319 (437)
Q Consensus 260 p~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~ 319 (437)
|++++++++-...+.|..+++.. ++.. ...... ....+..++++++|+++++....+.
T Consensus 176 ~dg~~lyv~d~~~~~I~~~~~~~~g~~~-~~~~~~-~~~~P~gi~vd~dG~l~va~~~~~~ 234 (306)
T 2p4o_A 176 RFGNFLYVSNTEKMLLLRIPVDSTDKPG-EPEIFV-EQTNIDDFAFDVEGNLYGATHIYNS 234 (306)
T ss_dssp EETTEEEEEETTTTEEEEEEBCTTSCBC-CCEEEE-ESCCCSSEEEBTTCCEEEECBTTCC
T ss_pred cCCCEEEEEeCCCCEEEEEEeCCCCCCC-ccEEEe-ccCCCCCeEECCCCCEEEEeCCCCe
Confidence 88887788888899999999975 3221 111100 1123455788899987776655555
No 249
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.44 E-value=0.00013 Score=66.51 Aligned_cols=255 Identities=10% Similarity=-0.013 Sum_probs=136.9
Q ss_pred eeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeCCC
Q psy4571 36 RFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHLLH 115 (437)
Q Consensus 36 ~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp~~ 115 (437)
....+++. ++++++.++..++.|..|+..++.+............ ...++.. ..........+..+++.+.+
T Consensus 20 ~p~~i~~d-~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~------~~~~~~~~~~p~gi~~~~~~ 91 (322)
T 2fp8_A 20 APNSFTFD-STNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNK-AFCENST------DAEKRPLCGRTYDISYNLQN 91 (322)
T ss_dssp CCCCEECC-TTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCH-HHHTTCC------CGGGHHHHCCEEEEEEETTT
T ss_pred CceEEEEc-CCCCEEEEEcCCCeEEEECCCCCceEEEecccccccc-ccccccc------chhccccCCCCceEEEcCCC
Confidence 34557777 7788777888888888887665544333211100000 0000000 00000111246788998733
Q ss_pred CCEEEEEECCCcEEEEEcCCCCCCCCeee-ecc-CCCCeEEEEEeC-CCCcEEEEEeC-----------------CCeEE
Q psy4571 116 ESLFGSVADDQKLMIWDTRSHNVSKPSHT-VDA-HTAEVNCLSFNP-YSEYILATGSA-----------------DKTVA 175 (437)
Q Consensus 116 ~~~l~~~~~dg~v~vwd~~~~~~~~~~~~-~~~-h~~~v~~l~~~~-~~~~~l~sgs~-----------------dg~i~ 175 (437)
+. |..+...+.|..+|..++. .+.+.. ..+ .......+++.+ +|. +.++-.. ++.|.
T Consensus 92 g~-l~v~d~~~~i~~~d~~~g~-~~~~~~~~~~~~~~~p~~i~~d~~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~v~ 168 (322)
T 2fp8_A 92 NQ-LYIVDCYYHLSVVGSEGGH-ATQLATSVDGVPFKWLYAVTVDQRTGI-VYFTDVSTLYDDRGVQQIMDTSDKTGRLI 168 (322)
T ss_dssp TE-EEEEETTTEEEEECTTCEE-CEEEESEETTEECSCEEEEEECTTTCC-EEEEESCSSCCTTCHHHHHHHTCCCEEEE
T ss_pred Cc-EEEEECCCCEEEEeCCCCE-EEEecccCCCCcccccceEEEecCCCE-EEEECCcccccccccceehcccCCCceEE
Confidence 44 4455555558888876321 111111 111 123578899999 887 4554322 37788
Q ss_pred EEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEE
Q psy4571 176 LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISD 255 (437)
Q Consensus 176 lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 255 (437)
.+|..+++. ..+.........++++|+++.++++-..++.|.+|++...... ..+.+... .+ ...
T Consensus 169 ~~d~~~~~~--~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~---------~~~~~~~~---~g-P~g 233 (322)
T 2fp8_A 169 KYDPSTKET--TLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKG---------TAEVLVKI---PN-PGN 233 (322)
T ss_dssp EEETTTTEE--EEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTT---------CEEEEEEC---SS-EEE
T ss_pred EEeCCCCEE--EEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCC---------ccceEEeC---CC-CCC
Confidence 899876443 2221112334679999999865666666789999998753210 01111111 22 678
Q ss_pred EEEccCCCeEEEEEeC----------CCeEEEEeCCCCCCceeeeeeecc-cCCceeeeecCCCCcccccCCCCc
Q psy4571 256 FSWNPNEPWVICSVSE----------DNIMQEYCDSTDSDTKTMRLDSIR-SNGGISSTASPTASSTASESPTPT 319 (437)
Q Consensus 256 l~~~p~~~~~l~s~~~----------dg~i~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~s~~g~~l~s~s~d~~ 319 (437)
+++.++|. +.++... .+.|..+|.. ++.+..+...... ...+..+++ .+++++++....+.
T Consensus 234 i~~d~~G~-l~va~~~~~~~~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~ 305 (322)
T 2fp8_A 234 IKRNADGH-FWVSSSEELDGNMHGRVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGS 305 (322)
T ss_dssp EEECTTSC-EEEEEEEETTSSTTSCEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSE
T ss_pred eEECCCCC-EEEEecCcccccccCCCccEEEEECCC-CCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCc
Confidence 99999998 5555543 4678888874 5555555432211 112223333 46666665555544
No 250
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.40 E-value=0.00026 Score=66.73 Aligned_cols=188 Identities=8% Similarity=-0.041 Sum_probs=118.0
Q ss_pred EEEecCceEEEEEeeecc---ccccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCC-CCCeeeeccCCCCeEEEE
Q psy4571 81 ISCILNISILFFEIIFTQ---NFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNV-SKPSHTVDAHTAEVNCLS 156 (437)
Q Consensus 81 i~~~~~~~i~~~~~~~~~---~~~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~-~~~~~~~~~h~~~v~~l~ 156 (437)
+.......|+..++.... .......+..++|++.++.++.+-...+.|+.+++..... ................++
T Consensus 86 ll~~~~~~I~~i~l~~~~~~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~gla 165 (400)
T 3p5b_L 86 LFFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLA 165 (400)
T ss_dssp EEEEETTEEEEECTTSCSCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEE
T ss_pred eEEeccceeEEEccCCcceeEeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEE
Confidence 334444555555543221 1122346789999996666666656678899998863211 122233333445678999
Q ss_pred EeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeC-CCeEEEEEcCCCCCCCCCCCC
Q psy4571 157 FNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGT-DRRLHVWDLSKIGEEQSTEDA 235 (437)
Q Consensus 157 ~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~-dg~i~vwd~~~~~~~~~~~~~ 235 (437)
+.+.+..+.++-...+.|.+.+++.... ...+.........+++.|.+.+++.+-.. .+.|...++......
T Consensus 166 vD~~~~~lY~~d~~~~~I~~~~~~g~~~-~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~------ 238 (400)
T 3p5b_L 166 VDWIHSNIYWTDSVLGTVSVADTKGVKR-KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY------ 238 (400)
T ss_dssp EETTTTEEEEEETTTTEEEEECTTTCSE-EEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCE------
T ss_pred EEecCCceEEEECCCCeEEEEeCCCCce-EEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccE------
Confidence 9987776667777788999999986433 22333334457899999977766665533 467888888653211
Q ss_pred CCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCC
Q psy4571 236 EDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTD 283 (437)
Q Consensus 236 ~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~ 283 (437)
......-.....|+++|++..+.++-...+.|...|+...
T Consensus 239 --------~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~ 278 (400)
T 3p5b_L 239 --------SLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG 278 (400)
T ss_dssp --------EEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred --------EEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCC
Confidence 1112223467899999988867767677889999998754
No 251
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.40 E-value=0.0012 Score=60.11 Aligned_cols=167 Identities=9% Similarity=0.048 Sum_probs=109.2
Q ss_pred CcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeee-eccCCCCeEEEEEeCCCCcEEEEEeCC-CeEEEEeCCCC
Q psy4571 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHT-VDAHTAEVNCLSFNPYSEYILATGSAD-KTVALWDLRNL 182 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~-~~~h~~~v~~l~~~~~~~~~l~sgs~d-g~i~lwd~~~~ 182 (437)
....+++.+.+++++++-...+.|.+.++.. ..... ..........++++|.+.+++.+.... +.|...+++..
T Consensus 78 ~p~glavd~~~~~ly~~d~~~~~I~~~~~~g----~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~ 153 (316)
T 1ijq_A 78 APDGLAVDWIHSNIYWTDSVLGTVSVADTKG----VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV 153 (316)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTS----SSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC
T ss_pred CcCEEEEeecCCeEEEEECCCCEEEEEeCCC----CceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCC
Confidence 4578999875666776667788999999872 22222 222345678999999877655554443 78888888753
Q ss_pred ceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCC
Q psy4571 183 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNE 262 (437)
Q Consensus 183 ~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~ 262 (437)
.. .......-.....++++|++..++++-...+.|..+|+..... +.+......-.....|++. +
T Consensus 154 ~~-~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~------------~~~~~~~~~~~~P~giav~--~ 218 (316)
T 1ijq_A 154 DI-YSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR------------KTILEDEKRLAHPFSLAVF--E 218 (316)
T ss_dssp CE-EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC------------EEEEECTTTTSSEEEEEEE--T
T ss_pred Ce-EEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCce------------EEEeecCCccCCcEEEEEE--C
Confidence 32 1122222345789999998877677777778999999875321 1122111122345677774 3
Q ss_pred CeEEEEEeCCCeEEEEeCCCCCCceeee
Q psy4571 263 PWVICSVSEDNIMQEYCDSTDSDTKTMR 290 (437)
Q Consensus 263 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 290 (437)
.+++++-...+.|..++..+++....+.
T Consensus 219 ~~ly~~d~~~~~V~~~~~~~g~~~~~i~ 246 (316)
T 1ijq_A 219 DKVFWTDIINEAIFSANRLTGSDVNLLA 246 (316)
T ss_dssp TEEEEEETTTTEEEEEETTTCCCCEEEE
T ss_pred CEEEEEECCCCeEEEEeCCCCcceEEEe
Confidence 4477777788999999988887766654
No 252
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.39 E-value=3.9e-05 Score=66.20 Aligned_cols=193 Identities=8% Similarity=0.091 Sum_probs=119.6
Q ss_pred cccccCC--CcceEEeeCCCCCEEEEEECCC--cEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCe
Q psy4571 98 QNFPFPL--SRQDVAWHLLHESLFGSVADDQ--KLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKT 173 (437)
Q Consensus 98 ~~~~~~~--~v~~~~~sp~~~~~l~~~~~dg--~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~ 173 (437)
+.++|.. -...+.|++ +.++.+.+.+| .|+++|+. .++.+....-.. ........+.+..+....-.++.
T Consensus 13 ~~~phd~~~ftqGL~~~~--~~LyestG~~g~S~v~~vD~~---tgkv~~~~~l~~-~~fgeGi~~~~~~ly~ltw~~~~ 86 (243)
T 3mbr_X 13 KRYPHDTTAFTEGLFYLR--GHLYESTGETGRSSVRKVDLE---TGRILQRAEVPP-PYFGAGIVAWRDRLIQLTWRNHE 86 (243)
T ss_dssp EEEECCTTCCEEEEEEET--TEEEEEECCTTSCEEEEEETT---TCCEEEEEECCT-TCCEEEEEEETTEEEEEESSSSE
T ss_pred EEcCCCCccccccEEEEC--CEEEEECCCCCCceEEEEECC---CCCEEEEEeCCC-CcceeEEEEeCCEEEEEEeeCCE
Confidence 4445543 355889986 56677767654 89999999 455555554322 22222223335656666777999
Q ss_pred EEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCcc---
Q psy4571 174 VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHT--- 250 (437)
Q Consensus 174 i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~--- 250 (437)
+.++|.++.+. +.++..-.. ...+.+++..+++| ..++.|.++|..+.+...+.. ...+.
T Consensus 87 v~v~D~~tl~~-~~ti~~~~~---Gwglt~dg~~L~vS-dgs~~l~~iDp~t~~~~~~I~------------V~~~g~~~ 149 (243)
T 3mbr_X 87 GFVYDLATLTP-RARFRYPGE---GWALTSDDSHLYMS-DGTAVIRKLDPDTLQQVGSIK------------VTAGGRPL 149 (243)
T ss_dssp EEEEETTTTEE-EEEEECSSC---CCEEEECSSCEEEE-CSSSEEEEECTTTCCEEEEEE------------CEETTEEC
T ss_pred EEEEECCcCcE-EEEEeCCCC---ceEEeeCCCEEEEE-CCCCeEEEEeCCCCeEEEEEE------------EccCCccc
Confidence 99999999665 666653222 23334567765544 558899999998875443311 11111
Q ss_pred ccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecc----------cCCceeeeecCCCCcccccC
Q psy4571 251 AKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIR----------SNGGISSTASPTASSTASES 315 (437)
Q Consensus 251 ~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~----------~~~~~~~~~s~~g~~l~s~s 315 (437)
..++.+.|. +|. +.+..-.+..|.+.|..+++.+..+...... ......++++|++..|...+
T Consensus 150 ~~lNeLe~~-~G~-lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 150 DNLNELEWV-NGE-LLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp CCEEEEEEE-TTE-EEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred ccceeeEEe-CCE-EEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence 245566665 565 6666656889999999999988888754321 11223458898766555443
No 253
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.35 E-value=9.2e-05 Score=64.43 Aligned_cols=144 Identities=10% Similarity=0.169 Sum_probs=89.7
Q ss_pred CCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEecc--C
Q psy4571 115 HESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFES--H 192 (437)
Q Consensus 115 ~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~--h 192 (437)
++.++.+.-.++.+.+||.. +.+.+.++..... ...+++++.. |+.+..++.|.++|..+.+. ...+.. .
T Consensus 96 g~~ly~ltw~~~~v~v~D~~---t~~~~~ti~~~~e---G~glt~dg~~-L~~SdGs~~i~~iDp~T~~v-~~~I~V~~~ 167 (262)
T 3nol_A 96 KDKIVGLTWKNGLGFVWNIR---NLRQVRSFNYDGE---GWGLTHNDQY-LIMSDGTPVLRFLDPESLTP-VRTITVTAH 167 (262)
T ss_dssp TTEEEEEESSSSEEEEEETT---TCCEEEEEECSSC---CCCEEECSSC-EEECCSSSEEEEECTTTCSE-EEEEECEET
T ss_pred CCEEEEEEeeCCEEEEEECc---cCcEEEEEECCCC---ceEEecCCCE-EEEECCCCeEEEEcCCCCeE-EEEEEeccC
Confidence 45666666678999999998 5666666653221 1333456776 55555678899999998765 444332 1
Q ss_pred C---CceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEE
Q psy4571 193 K---DEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSV 269 (437)
Q Consensus 193 ~---~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~ 269 (437)
. ..++.+.|. +|+ +++..-.++.|.+.|..+++...........+... ....-....+.|+|+|+++.+++||
T Consensus 168 g~~~~~lNELe~~-~G~-lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~--~~~~~~~vlNGIA~dp~~~~lfVTG 243 (262)
T 3nol_A 168 GEELPELNELEWV-DGE-IFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAG--PLPSPIDVLNGIAWDKEHHRLFVTG 243 (262)
T ss_dssp TEECCCEEEEEEE-TTE-EEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSC--SCCSSCCCEEEEEEETTTTEEEEEE
T ss_pred CccccccceeEEE-CCE-EEEEEccCCeEEEEECCCCcEEEEEECCcCccccc--cccCcCCceEEEEEcCCCCEEEEEC
Confidence 1 334567776 664 66666678899999999887554422110000000 0001124568999999999777776
Q ss_pred e
Q psy4571 270 S 270 (437)
Q Consensus 270 ~ 270 (437)
-
T Consensus 244 K 244 (262)
T 3nol_A 244 K 244 (262)
T ss_dssp T
T ss_pred C
Confidence 3
No 254
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.31 E-value=0.0013 Score=59.86 Aligned_cols=167 Identities=8% Similarity=0.028 Sum_probs=109.0
Q ss_pred CcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEe-CCCeEEEEeCCCCc
Q psy4571 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGS-ADKTVALWDLRNLK 183 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs-~dg~i~lwd~~~~~ 183 (437)
....+++.+.++.++.+-...+.|.+++++.. ...............+++.|.+.+++.+-. ..+.|...+++...
T Consensus 80 ~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~---~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~ 156 (318)
T 3sov_A 80 SPDGLACDWLGEKLYWTDSETNRIEVSNLDGS---LRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSS 156 (318)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSC---SCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCS
T ss_pred CccEEEEEcCCCeEEEEECCCCEEEEEECCCC---cEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCC
Confidence 45688898866777777667789999998732 222222234456789999998776444432 35788888887532
Q ss_pred eeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCC
Q psy4571 184 LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEP 263 (437)
Q Consensus 184 ~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~ 263 (437)
. .......-...+.++++|++..++++-+..+.|..+|+..... +.+ ..+......++++. +.
T Consensus 157 ~-~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~------------~~~--~~~~~~~P~glav~--~~ 219 (318)
T 3sov_A 157 R-FIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNR------------QAV--VKGSLPHPFALTLF--ED 219 (318)
T ss_dssp C-EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC------------EEE--ECSCCSCEEEEEEE--TT
T ss_pred e-EEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCce------------EEE--ecCCCCCceEEEEe--CC
Confidence 2 2222222345689999998777777777788999999875321 111 12223345667774 33
Q ss_pred eEEEEEeCCCeEEEEeCCCCCCceeeee
Q psy4571 264 WVICSVSEDNIMQEYCDSTDSDTKTMRL 291 (437)
Q Consensus 264 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 291 (437)
.++.+-...+.|..++..+++....+..
T Consensus 220 ~lywtd~~~~~V~~~~~~~G~~~~~i~~ 247 (318)
T 3sov_A 220 ILYWTDWSTHSILACNKYTGEGLREIHS 247 (318)
T ss_dssp EEEEEETTTTEEEEEETTTCCSCEEEEC
T ss_pred EEEEEecCCCeEEEEECCCCCceEEEeC
Confidence 4777777889999999988887766653
No 255
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.27 E-value=8.3e-05 Score=67.81 Aligned_cols=202 Identities=8% Similarity=-0.077 Sum_probs=120.5
Q ss_pred EEecCceEEEEEeeecccc---c-cCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEE
Q psy4571 82 SCILNISILFFEIIFTQNF---P-FPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSF 157 (437)
Q Consensus 82 ~~~~~~~i~~~~~~~~~~~---~-~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~ 157 (437)
....++.+..+|.. ++.. . ....+.++...+ ++. +..++.++.|..+|.. + +...........+.++..
T Consensus 112 v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~-~g~-l~vgt~~~~l~~~d~~-g---~~~~~~~~~~~~~~~~~~ 184 (330)
T 3hxj_A 112 VTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSE-DGT-IYVGSNDNYLYAINPD-G---TEKWRFKTNDAITSAASI 184 (330)
T ss_dssp EECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECT-TSC-EEEECTTSEEEEECTT-S---CEEEEEECSSCCCSCCEE
T ss_pred EEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcC-CCE-EEEEcCCCEEEEECCC-C---CEeEEEecCCCceeeeEE
Confidence 44456777777755 2211 1 122355666665 344 5567788999999986 2 333344334455677777
Q ss_pred eCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCC
Q psy4571 158 NPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAED 237 (437)
Q Consensus 158 ~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~ 237 (437)
.+++. +..++ +.|..+| .+++. ..........+.++...++|. +..++.++.|..+|... ..
T Consensus 185 d~~g~--l~v~t--~~l~~~d-~~g~~-~~~~~~~~~~~~~~~~~~~g~--l~v~t~~~gl~~~~~~g-~~--------- 246 (330)
T 3hxj_A 185 GKDGT--IYFGS--DKVYAIN-PDGTE-KWNFYAGYWTVTRPAISEDGT--IYVTSLDGHLYAINPDG-TE--------- 246 (330)
T ss_dssp CTTCC--EEEES--SSEEEEC-TTSCE-EEEECCSSCCCSCCEECTTSC--EEEEETTTEEEEECTTS-CE---------
T ss_pred cCCCE--EEEEe--CEEEEEC-CCCcE-EEEEccCCcceeceEECCCCe--EEEEcCCCeEEEECCCC-CE---------
Confidence 77776 45555 7899999 55444 445544556688888888875 55677788888887432 21
Q ss_pred CCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCC
Q psy4571 238 GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPT 317 (437)
Q Consensus 238 ~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d 317 (437)
+.........+..+...+++. +..++.+|.+..+|. +++....+.. .......+...++|.+++ ++.+
T Consensus 247 -----~~~~~~~~~~~~~~~~~~~g~--l~v~t~~ggl~~~d~-~g~~~~~~~~---~~~~~~~~~~d~~g~l~~-gt~~ 314 (330)
T 3hxj_A 247 -----KWRFKTGKRIESSPVIGNTDT--IYFGSYDGHLYAINP-DGTEKWNFET---GSWIIATPVIDENGTIYF-GTRN 314 (330)
T ss_dssp -----EEEEECSSCCCSCCEECTTSC--EEEECTTCEEEEECT-TSCEEEEEEC---SSCCCSCCEECTTCCEEE-ECTT
T ss_pred -----eEEeeCCCCccccceEcCCCe--EEEecCCCCEEEECC-CCcEEEEEEc---CCccccceEEcCCCEEEE-EcCC
Confidence 122222222333455566665 557788888999996 5655544432 222233345557776544 6667
Q ss_pred Ccc
Q psy4571 318 PTN 320 (437)
Q Consensus 318 ~~~ 320 (437)
|.+
T Consensus 315 G~~ 317 (330)
T 3hxj_A 315 GKF 317 (330)
T ss_dssp SCE
T ss_pred CeE
Confidence 763
No 256
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.24 E-value=0.00042 Score=59.70 Aligned_cols=192 Identities=10% Similarity=0.039 Sum_probs=114.2
Q ss_pred EEEeeCCCcceEEEeeccC--ceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeCCCC
Q psy4571 39 RLCVAEPFDDAVEERVINE--EYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHLLHE 116 (437)
Q Consensus 39 ~~~~~~~~~~~l~tgs~d~--~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp~~~ 116 (437)
-+.|+ . +.++++.+.++ .++..|..++.+....-.+...+ -..++.. ++
T Consensus 25 GL~~~-~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~f-------------------------geGi~~~--~~ 75 (243)
T 3mbr_X 25 GLFYL-R-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYF-------------------------GAGIVAW--RD 75 (243)
T ss_dssp EEEEE-T-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCC-------------------------EEEEEEE--TT
T ss_pred cEEEE-C-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcc-------------------------eeEEEEe--CC
Confidence 35666 3 45555555543 77888877777765543222110 0122332 45
Q ss_pred CEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEecc--CC-
Q psy4571 117 SLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFES--HK- 193 (437)
Q Consensus 117 ~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~--h~- 193 (437)
.++...-.++.+.+||.. +.+.+.++..... -..+ .+++.. |+.+..++.|.++|..+.+. ...+.. +.
T Consensus 76 ~ly~ltw~~~~v~v~D~~---tl~~~~ti~~~~~-Gwgl--t~dg~~-L~vSdgs~~l~~iDp~t~~~-~~~I~V~~~g~ 147 (243)
T 3mbr_X 76 RLIQLTWRNHEGFVYDLA---TLTPRARFRYPGE-GWAL--TSDDSH-LYMSDGTAVIRKLDPDTLQQ-VGSIKVTAGGR 147 (243)
T ss_dssp EEEEEESSSSEEEEEETT---TTEEEEEEECSSC-CCEE--EECSSC-EEEECSSSEEEEECTTTCCE-EEEEECEETTE
T ss_pred EEEEEEeeCCEEEEEECC---cCcEEEEEeCCCC-ceEE--eeCCCE-EEEECCCCeEEEEeCCCCeE-EEEEEEccCCc
Confidence 677777789999999998 5666666653322 2344 456776 55556689999999998765 444432 21
Q ss_pred --CceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEe
Q psy4571 194 --DEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVS 270 (437)
Q Consensus 194 --~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~ 270 (437)
..++.+.+. +|+ +++..-.+..|.+.|..+++...........+.... ....-.+-.+.|+++|+++.+++||-
T Consensus 148 ~~~~lNeLe~~-~G~-lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~-~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 148 PLDNLNELEWV-NGE-LLANVWLTSRIARIDPASGKVVAWIDLQALVPDADA-LTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp ECCCEEEEEEE-TTE-EEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTS-CCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred ccccceeeEEe-CCE-EEEEECCCCeEEEEECCCCCEEEEEECCcCcccccc-ccCCcCCceEEEEEcCCCCEEEEECC
Confidence 235666765 554 666665677999999999875544321111000000 00112246789999999987887773
No 257
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.24 E-value=0.0011 Score=60.00 Aligned_cols=231 Identities=10% Similarity=0.007 Sum_probs=128.3
Q ss_pred eeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeCCC
Q psy4571 36 RFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHLLH 115 (437)
Q Consensus 36 ~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp~~ 115 (437)
....+++. +++.++++...++.|..++..++... . +. ....+..+++.+ +
T Consensus 33 ~pegia~~-~~g~lyv~d~~~~~I~~~d~~g~~~~-~-------------------~~--------~~~~p~gia~~~-d 82 (306)
T 2p4o_A 33 FLENLASA-PDGTIFVTNHEVGEIVSITPDGNQQI-H-------------------AT--------VEGKVSGLAFTS-N 82 (306)
T ss_dssp CEEEEEEC-TTSCEEEEETTTTEEEEECTTCCEEE-E-------------------EE--------CSSEEEEEEECT-T
T ss_pred CcceEEEC-CCCCEEEEeCCCCeEEEECCCCceEE-E-------------------Ee--------CCCCceeEEEcC-C
Confidence 34567787 67777777666677766665443211 1 00 112356889999 4
Q ss_pred CCEEEEEECCC--cEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEec---
Q psy4571 116 ESLFGSVADDQ--KLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFE--- 190 (437)
Q Consensus 116 ~~~l~~~~~dg--~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~--- 190 (437)
++++++..... .|..+|..++. ...+... ........++..+++. ++++-..++.|..+|...+...+....
T Consensus 83 G~l~vad~~~~~~~v~~~d~~~g~-~~~~~~~-~~~~~~~g~~~~~~~~-~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~ 159 (306)
T 2p4o_A 83 GDLVATGWNADSIPVVSLVKSDGT-VETLLTL-PDAIFLNGITPLSDTQ-YLTADSYRGAIWLIDVVQPSGSIWLEHPML 159 (306)
T ss_dssp SCEEEEEECTTSCEEEEEECTTSC-EEEEEEC-TTCSCEEEEEESSSSE-EEEEETTTTEEEEEETTTTEEEEEEECGGG
T ss_pred CcEEEEeccCCcceEEEEcCCCCe-EEEEEeC-CCccccCcccccCCCc-EEEEECCCCeEEEEeCCCCcEeEEEECCcc
Confidence 56665544332 46666765321 1111111 1122334555555443 455555689999999875421121100
Q ss_pred ------cCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCe
Q psy4571 191 ------SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 264 (437)
Q Consensus 191 ------~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~ 264 (437)
..-...+.+ +|++++++++-...+.|.++++....... ..+.+... .....+++.++|.
T Consensus 160 ~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~--------~~~~~~~~----~~P~gi~vd~dG~- 224 (306)
T 2p4o_A 160 ARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPG--------EPEIFVEQ----TNIDDFAFDVEGN- 224 (306)
T ss_dssp SCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBC--------CCEEEEES----CCCSSEEEBTTCC-
T ss_pred ccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCC--------ccEEEecc----CCCCCeEECCCCC-
Confidence 111234555 78888777777778899999997521111 01111111 2346688999998
Q ss_pred EEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeec---CCCCcccccCC
Q psy4571 265 VICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTAS---PTASSTASESP 316 (437)
Q Consensus 265 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s---~~g~~l~s~s~ 316 (437)
++++....+.|.++|.. ++....... ......+..++|. |++..|...+.
T Consensus 225 l~va~~~~~~V~~~~~~-G~~~~~~~~-~~~~~~p~~~a~~g~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 225 LYGATHIYNSVVRIAPD-RSTTIIAQA-EQGVIGSTAVAFGQTEGDCTAIYVVTN 277 (306)
T ss_dssp EEEECBTTCCEEEECTT-CCEEEEECG-GGTCTTEEEEEECCSTTTTTEEEEEEC
T ss_pred EEEEeCCCCeEEEECCC-CCEEEEeec-ccccCCceEEEEecccCCCCEEEEECC
Confidence 77777778899999975 443211111 1122456677887 88776655543
No 258
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.23 E-value=5.5e-05 Score=76.47 Aligned_cols=175 Identities=10% Similarity=0.078 Sum_probs=102.3
Q ss_pred EEEEeCCCCcEEEEEeCCC-------------------eEEEEeCCCCceeeeEecc--CC-------CceEEEEEcCCC
Q psy4571 154 CLSFNPYSEYILATGSADK-------------------TVALWDLRNLKLKLHSFES--HK-------DEIFQVQWSPHN 205 (437)
Q Consensus 154 ~l~~~~~~~~~l~sgs~dg-------------------~i~lwd~~~~~~~~~~~~~--h~-------~~v~~v~~~p~~ 205 (437)
.++++|+.. +++.++.++ .|..+|.++++. +..+.. |. .+.....+..+|
T Consensus 234 ~~a~d~~~~-~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~-~W~~~~~~~~~wd~~~~~~~~~~d~~~~G 311 (668)
T 1kv9_A 234 SMAYDPELD-LLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKL-AWHYQVTPGDSWDFTATQQITLAELNIDG 311 (668)
T ss_dssp CEEEETTTT-EEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCE-EEEEESSTTCCSCCCCCSCEEEEEEEETT
T ss_pred ceEEcCCCC-EEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCce-eeEeecCCCccccccCCCCcEEEEeccCC
Confidence 467888777 578887776 499999999776 444432 21 233333333455
Q ss_pred C--cEEEEEeCCCeEEEEEcCCCCCCCCCCCCCC--------CCCceEE------------EecCccc--cEEEEEEccC
Q psy4571 206 E--TILASSGTDRRLHVWDLSKIGEEQSTEDAED--------GPPELLF------------IHGGHTA--KISDFSWNPN 261 (437)
Q Consensus 206 ~--~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~--------~~~~~~~------------~~~~h~~--~v~~l~~~p~ 261 (437)
+ ..++.++.+|.++++|..+++.......... .....+. ...+..+ .-..++++|+
T Consensus 312 ~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~ 391 (668)
T 1kv9_A 312 KPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPG 391 (668)
T ss_dssp EEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETT
T ss_pred cEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCC
Confidence 3 2578899999999999999875522110000 0000000 0000000 0112567777
Q ss_pred CCeEEEE-----------------------------------EeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecC
Q psy4571 262 EPWVICS-----------------------------------VSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASP 306 (437)
Q Consensus 262 ~~~~l~s-----------------------------------~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~ 306 (437)
...+++. ...+|.|..||+.+++......... .........
T Consensus 392 ~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~----~~~~~~~~t 467 (668)
T 1kv9_A 392 TGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPT----HWNGGTLST 467 (668)
T ss_dssp TTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESS----SCCCCEEEE
T ss_pred CCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCC----CCcCceeEe
Confidence 6622221 1134889999999998776665421 222234556
Q ss_pred CCCcccccCCCCcccccccccccccccccchhhhhhhhh
Q psy4571 307 TASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQL 345 (437)
Q Consensus 307 ~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~ 345 (437)
.+.+++.++.++. ++.||..+|+++..+
T Consensus 468 ~gg~vf~g~~dg~-----------l~a~d~~tG~~l~~~ 495 (668)
T 1kv9_A 468 AGNLVFQGTAAGQ-----------MHAYSADKGEALWQF 495 (668)
T ss_dssp TTTEEEEECTTSE-----------EEEEETTTCCEEEEE
T ss_pred CCCEEEEECCccc-----------chhhhhhcChhheEe
Confidence 7788888888888 677777777766555
No 259
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.20 E-value=0.0032 Score=59.25 Aligned_cols=168 Identities=9% Similarity=0.043 Sum_probs=109.6
Q ss_pred CcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeC-CCeEEEEeCCCCc
Q psy4571 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSA-DKTVALWDLRNLK 183 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~-dg~i~lwd~~~~~ 183 (437)
....+++.+.+++++.+-...+.|.+.+++.. .....+.........|+++|.+.+++.+-.. .+.|...+++...
T Consensus 160 ~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~---~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~ 236 (400)
T 3p5b_L 160 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGV---KRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD 236 (400)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEECTTTC---SEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCS
T ss_pred CcccEEEEecCCceEEEECCCCeEEEEeCCCC---ceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCc
Confidence 56788998866777777677889999988732 2222222334458899999987764554433 3789888887533
Q ss_pred eeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCC
Q psy4571 184 LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEP 263 (437)
Q Consensus 184 ~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~ 263 (437)
. .......-.....|+++|++..++++-...+.|..+|+..... ..+....+.-....+|++ ++.
T Consensus 237 ~-~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~------------~~~~~~~~~l~~P~gl~v--~~~ 301 (400)
T 3p5b_L 237 I-YSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR------------KTILEDEKRLAHPFSLAV--FED 301 (400)
T ss_dssp C-EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCC------------EEEEECSSTTSSEEEEEE--ETT
T ss_pred c-EEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCcc------------EEEEeCCCCCCCCEEEEE--eCC
Confidence 2 2222223356789999998877666666778899999875321 112211122234456666 344
Q ss_pred eEEEEEeCCCeEEEEeCCCCCCceeee
Q psy4571 264 WVICSVSEDNIMQEYCDSTDSDTKTMR 290 (437)
Q Consensus 264 ~~l~s~~~dg~i~iwd~~~~~~~~~~~ 290 (437)
.++++-...+.|..+|..+++....+.
T Consensus 302 ~lywtd~~~~~V~~~~~~~G~~~~~i~ 328 (400)
T 3p5b_L 302 KVFWTDIINEAIFSANRLTGSDVNLLA 328 (400)
T ss_dssp EEEEEESSSCSEEEEESSSCCCCEEEE
T ss_pred EEEEecCCCCeEEEEEcCCCCceEEEe
Confidence 477787888999999988887776665
No 260
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.18 E-value=0.00035 Score=63.66 Aligned_cols=182 Identities=8% Similarity=0.015 Sum_probs=111.5
Q ss_pred CcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeecc--------------------CCCCeEEEEEeC-CCCc
Q psy4571 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDA--------------------HTAEVNCLSFNP-YSEY 163 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~--------------------h~~~v~~l~~~~-~~~~ 163 (437)
...+++|++ +++++.++..++.|..||.... . +..+.. ....+..+++.+ ++.
T Consensus 20 ~p~~i~~d~-~g~~l~v~~~~~~i~~~~~~~~---~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~- 93 (322)
T 2fp8_A 20 APNSFTFDS-TNKGFYTSVQDGRVIKYEGPNS---G-FVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ- 93 (322)
T ss_dssp CCCCEECCT-TCSSEEEECTTSEEEEECCTTT---C-EEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE-
T ss_pred CceEEEEcC-CCCEEEEEcCCCeEEEECCCCC---c-eEEEecccccccccccccccchhccccCCCCceEEEcCCCCc-
Confidence 467899999 5676667888899999987632 1 222210 013578999998 554
Q ss_pred EEEEEeCCCeEEEEeCCCCceeeeEecc-----CCCceEEEEEcC-CCCcEEEEEeC-----------------CCeEEE
Q psy4571 164 ILATGSADKTVALWDLRNLKLKLHSFES-----HKDEIFQVQWSP-HNETILASSGT-----------------DRRLHV 220 (437)
Q Consensus 164 ~l~sgs~dg~i~lwd~~~~~~~~~~~~~-----h~~~v~~v~~~p-~~~~~l~sg~~-----------------dg~i~v 220 (437)
|..+...+.|..+|..++. +..+.. .......+++.| +|. ++++-.. ++.|..
T Consensus 94 -l~v~d~~~~i~~~d~~~g~--~~~~~~~~~~~~~~~p~~i~~d~~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~ 169 (322)
T 2fp8_A 94 -LYIVDCYYHLSVVGSEGGH--ATQLATSVDGVPFKWLYAVTVDQRTGI-VYFTDVSTLYDDRGVQQIMDTSDKTGRLIK 169 (322)
T ss_dssp -EEEEETTTEEEEECTTCEE--CEEEESEETTEECSCEEEEEECTTTCC-EEEEESCSSCCTTCHHHHHHHTCCCEEEEE
T ss_pred -EEEEECCCCEEEEeCCCCE--EEEecccCCCCcccccceEEEecCCCE-EEEECCcccccccccceehcccCCCceEEE
Confidence 5556555668888877533 222211 113468899999 886 5555432 366888
Q ss_pred EEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCC--ceeeeeeecccCC
Q psy4571 221 WDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSD--TKTMRLDSIRSNG 298 (437)
Q Consensus 221 wd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~--~~~~~~~~~~~~~ 298 (437)
+|..++.. ......-.....|+++|+++.++++-..++.|..+++..... ...+. . .. +
T Consensus 170 ~d~~~~~~---------------~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~--~-~~-g 230 (322)
T 2fp8_A 170 YDPSTKET---------------TLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLV--K-IP-N 230 (322)
T ss_dssp EETTTTEE---------------EEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEE--E-CS-S
T ss_pred EeCCCCEE---------------EEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEE--e-CC-C
Confidence 88765321 101111123467999999986666667788999999885422 11111 1 11 2
Q ss_pred ceeeeecCCCCcccccC
Q psy4571 299 GISSTASPTASSTASES 315 (437)
Q Consensus 299 ~~~~~~s~~g~~l~s~s 315 (437)
+..+++.++|.++++..
T Consensus 231 P~gi~~d~~G~l~va~~ 247 (322)
T 2fp8_A 231 PGNIKRNADGHFWVSSS 247 (322)
T ss_dssp EEEEEECTTSCEEEEEE
T ss_pred CCCeEECCCCCEEEEec
Confidence 55568888888666653
No 261
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.18 E-value=0.00082 Score=68.79 Aligned_cols=165 Identities=8% Similarity=-0.030 Sum_probs=109.0
Q ss_pred CCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCC-CCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCC
Q psy4571 104 LSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNV-SKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNL 182 (437)
Q Consensus 104 ~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~-~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~ 182 (437)
..+..++|++.++.++.+-...+.|+.+++..... ......+.........|++.+.+.+|+++-...+.|.+.+++..
T Consensus 424 ~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~ 503 (791)
T 3m0c_C 424 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 503 (791)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSS
T ss_pred CceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCC
Confidence 45678999986666666666678899888873211 12233333334567789999888877777778899999999864
Q ss_pred ceeeeEeccCCCceEEEEEcCCCCcEEEEEeCC-CeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccC
Q psy4571 183 KLKLHSFESHKDEIFQVQWSPHNETILASSGTD-RRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPN 261 (437)
Q Consensus 183 ~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~d-g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~ 261 (437)
.. ...+.........|++.|.+.+++++-..+ +.|.+.++...... ......-.....|++.+.
T Consensus 504 ~~-~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~--------------~lv~~~l~~P~GLavD~~ 568 (791)
T 3m0c_C 504 KR-KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY--------------SLVTENIQWPNGITLDLL 568 (791)
T ss_dssp SE-EEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEE--------------EEECSSCSCEEEEEEETT
T ss_pred eE-EEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceE--------------EEEeCCCCCceEEEEecC
Confidence 32 222323345578999999876666665333 78888888653211 112222346789999988
Q ss_pred CCeEEEEEeCCCeEEEEeCCCC
Q psy4571 262 EPWVICSVSEDNIMQEYCDSTD 283 (437)
Q Consensus 262 ~~~~l~s~~~dg~i~iwd~~~~ 283 (437)
+..+.++-...+.|...++...
T Consensus 569 ~~~LYwaD~~~~~I~~~d~dG~ 590 (791)
T 3m0c_C 569 SGRLYWVDSKLHSISSIDVNGG 590 (791)
T ss_dssp TTEEEEEETTTTEEEEEETTSC
T ss_pred CCeEEEEeCCCCcEEEEecCCC
Confidence 7767766667789999998754
No 262
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.17 E-value=0.0021 Score=66.48 Aligned_cols=256 Identities=6% Similarity=0.005 Sum_probs=144.0
Q ss_pred eEEEEeeCCCcceEEEeeccCceEeeecCCCc------------eeEEEecCCCCeEEEecCceEEEEEeeecc--cccc
Q psy4571 37 FYRLCVAEPFDDAVEERVINEEYKIWKKNTPF------------LYDLVVNNYVANISCILNISILFFEIIFTQ--NFPF 102 (437)
Q Consensus 37 v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~------------~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~--~~~~ 102 (437)
|.+++.. +++.+.+ |..++-+..|+..++. +..+.....+....+..++.+..++....+ .+..
T Consensus 175 i~~i~~d-~~g~lwi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lwigt~~~Gl~~~~~~~~~~~~~~~ 252 (795)
T 4a2l_A 175 IASTLYR-QGDQIYI-GTSTDGLYTYSITQKTFEKVIPILGTKQIQAILQQSPTRIWVATEGAGLFLINPKTKEIKNYLH 252 (795)
T ss_dssp CEEEEEE-ETTEEEE-EESSSCEEEEETTTCCEEECC----CCCEEEEEEEETTEEEEEEBSSCEEEEETTTTEEEEECC
T ss_pred eEEEEEC-CCCCEEE-EECCCCEEEEeCCCCeEEEecCCCCCCeeEEEEEcCCCCEEEEECCCCeEEEeCCCCeEEEeec
Confidence 7777777 6665554 5554446667654432 222222222222233334456677643221 1111
Q ss_pred ---------CCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeec--------cCCCCeEEEEEeCCCCcEE
Q psy4571 103 ---------PLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVD--------AHTAEVNCLSFNPYSEYIL 165 (437)
Q Consensus 103 ---------~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~--------~h~~~v~~l~~~~~~~~~l 165 (437)
...|.++...+ ++.+. .|+.+| |.+||..+. . ...+. -....|.++...++|. |
T Consensus 253 ~~~~~~~l~~~~i~~i~~d~-~g~lW-igt~~G-l~~~~~~~~---~-~~~~~~~~~~~~~l~~~~i~~i~~D~~g~--l 323 (795)
T 4a2l_A 253 SPSNPKSISSNYIRSLAMDS-QNRLW-IGTFND-LNIYHEGTD---S-FASYSSNPVENGSLSQRSVRSIFMDSQGG--M 323 (795)
T ss_dssp CTTCTTSCSCSBEEEEEECT-TSCEE-EEESSC-EEEEETTTT---E-EEEECCCTTSTTSCSSSCEEEEEECTTSC--E
T ss_pred CCCCccccCCCeEEEEEEcC-CCCEE-EEeCCh-hheEcCCCC---e-EEEEecCCCCCCCCCCCcEEEEEEeCCcC--E
Confidence 23577888877 44444 455554 888987632 1 22221 1235799999999887 7
Q ss_pred EEEeCCCeEEEEeCCCCceeeeEecc-------CCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCC
Q psy4571 166 ATGSADKTVALWDLRNLKLKLHSFES-------HKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDG 238 (437)
Q Consensus 166 ~sgs~dg~i~lwd~~~~~~~~~~~~~-------h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~ 238 (437)
-.|+.++-|..++..+.. ...+.. ....|.++...++|. |-.|+.++-|..||..+.......... ..
T Consensus 324 Wigt~~~Gl~~~~~~~~~--~~~~~~~~~~~~l~~~~V~~i~~d~~g~--lWiGt~~~Gl~~~~~~~~~~~~~~~~~-~~ 398 (795)
T 4a2l_A 324 WLGTYFGGLNYYHPIRNR--FKNIRNIPYKNSLSDNVVSCIVEDKDKN--LWIGTNDGGLNLYNPITQRFTSYTLQE-DE 398 (795)
T ss_dssp EEEESSSCEEEECGGGGS--SEEECCCTTSSSCSCSSEEEEEECTTSC--EEEEESSSCEEEECTTTCCEEEECCC----
T ss_pred EEEECCCCeEEeCCCccc--ceEEcCCCCCCCCCCCeeEEEEECCCCC--EEEEECCCCeEEEcCCCCcEEEEecCC-CC
Confidence 778888889999876533 222211 235699999998886 556777777999988764321110000 00
Q ss_pred CCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeee--ecccCCceeeeecCCCCcccccC
Q psy4571 239 PPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLD--SIRSNGGISSTASPTASSTASES 315 (437)
Q Consensus 239 ~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~--~~~~~~~~~~~~s~~g~~l~s~s 315 (437)
+ ...-....|.++...++|. +|..|+.++-|..+|..+++.. .+... ......+..+...++|.+++...
T Consensus 399 ~-----~~~l~~~~v~~i~~d~~g~-~lWigt~~~Gl~~~d~~~~~~~-~~~~~~~~l~~~~v~~i~~d~~g~lwigt~ 470 (795)
T 4a2l_A 399 S-----ARGIGSNNIKAVYVDEKKS-LVYIGTHAGGLSILHRNSGQVE-NFNQRNSQLVNENVYAILPDGEGNLWLGTL 470 (795)
T ss_dssp --------CCSCSCEEEEEEETTTT-EEEEEETTTEEEEEETTTCCEE-EECTTTSCCSCSCEEEEEECSSSCEEEEES
T ss_pred c-----ccCCCCccEEEEEEcCCCC-EEEEEeCcCceeEEeCCCCcEE-EeecCCCCcCCCeeEEEEECCCCCEEEEec
Confidence 0 0001135689998888887 4666777778999999876432 22110 01123344456667777666554
No 263
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.17 E-value=0.0015 Score=67.48 Aligned_cols=250 Identities=8% Similarity=0.000 Sum_probs=138.1
Q ss_pred eEEEEeeCCCcceEEEeeccCceEeeecCCCc-------------eeEEEecCCCCeEEEecCceEEEEEeeeccccc--
Q psy4571 37 FYRLCVAEPFDDAVEERVINEEYKIWKKNTPF-------------LYDLVVNNYVANISCILNISILFFEIIFTQNFP-- 101 (437)
Q Consensus 37 v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~-------------~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~-- 101 (437)
|.+++.. +++.+.+. ..+ .+..|+..++. +..+.............++.+..++....+...
T Consensus 133 i~~i~~d-~~g~lwi~-t~~-gl~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lwigt~~~Gl~~~~~~~~~~~~~~ 209 (795)
T 4a2l_A 133 VNGIEEI-SPEQLLIS-TPE-GLIMFDIKESKFIDDSFSTAMHKTIASTLYRQGDQIYIGTSTDGLYTYSITQKTFEKVI 209 (795)
T ss_dssp CCEEEEE-ETTEEEEE-ETT-EEEEEETTTTEEECSSSCHHHHTCCEEEEEEETTEEEEEESSSCEEEEETTTCCEEECC
T ss_pred EEEEEEC-CCCCEEEE-ECC-ceEEEECCCCEEEeccCCCCCCcceEEEEECCCCCEEEEECCCCEEEEeCCCCeEEEec
Confidence 6666666 55655543 333 46667754332 233333233332233434456667643322111
Q ss_pred ---cCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeecc--------CCCCeEEEEEeCCCCcEEEEEeC
Q psy4571 102 ---FPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDA--------HTAEVNCLSFNPYSEYILATGSA 170 (437)
Q Consensus 102 ---~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~--------h~~~v~~l~~~~~~~~~l~sgs~ 170 (437)
....|.++...+ ++.+. .|+.++-+..||..+. + ...+.. ....|.++...++|. |..|+.
T Consensus 210 ~~~~~~~i~~i~~d~-~g~lw-igt~~~Gl~~~~~~~~---~-~~~~~~~~~~~~~l~~~~i~~i~~d~~g~--lWigt~ 281 (795)
T 4a2l_A 210 PILGTKQIQAILQQS-PTRIW-VATEGAGLFLINPKTK---E-IKNYLHSPSNPKSISSNYIRSLAMDSQNR--LWIGTF 281 (795)
T ss_dssp ----CCCEEEEEEEE-TTEEE-EEEBSSCEEEEETTTT---E-EEEECCCTTCTTSCSCSBEEEEEECTTSC--EEEEES
T ss_pred CCCCCCeeEEEEEcC-CCCEE-EEECCCCeEEEeCCCC---e-EEEeecCCCCccccCCCeEEEEEEcCCCC--EEEEeC
Confidence 134577777776 34444 4554444888997632 1 112211 135699999998887 556666
Q ss_pred CCeEEEEeCCCCceeeeEecc--------CCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCce
Q psy4571 171 DKTVALWDLRNLKLKLHSFES--------HKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPEL 242 (437)
Q Consensus 171 dg~i~lwd~~~~~~~~~~~~~--------h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~ 242 (437)
+ -|.++|..+... ..+.. ....|.++...++|. +-.|+.++-|..++............ . . .
T Consensus 282 ~-Gl~~~~~~~~~~--~~~~~~~~~~~~l~~~~i~~i~~D~~g~--lWigt~~~Gl~~~~~~~~~~~~~~~~-~-~-~-- 351 (795)
T 4a2l_A 282 N-DLNIYHEGTDSF--ASYSSNPVENGSLSQRSVRSIFMDSQGG--MWLGTYFGGLNYYHPIRNRFKNIRNI-P-Y-K-- 351 (795)
T ss_dssp S-CEEEEETTTTEE--EEECCCTTSTTSCSSSCEEEEEECTTSC--EEEEESSSCEEEECGGGGSSEEECCC-T-T-S--
T ss_pred C-hhheEcCCCCeE--EEEecCCCCCCCCCCCcEEEEEEeCCcC--EEEEECCCCeEEeCCCcccceEEcCC-C-C-C--
Confidence 6 588899876442 22211 235699999999986 55677777788898755321110000 0 0 0
Q ss_pred EEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeee------ecccCCceeeeecCCCC-cccc
Q psy4571 243 LFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLD------SIRSNGGISSTASPTAS-STAS 313 (437)
Q Consensus 243 ~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~------~~~~~~~~~~~~s~~g~-~l~s 313 (437)
..-....|.++...++|. +..|+.++-|..||..+++.. .+... ......+..+...++|. +.+.
T Consensus 352 ---~~l~~~~V~~i~~d~~g~--lWiGt~~~Gl~~~~~~~~~~~-~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWig 423 (795)
T 4a2l_A 352 ---NSLSDNVVSCIVEDKDKN--LWIGTNDGGLNLYNPITQRFT-SYTLQEDESARGIGSNNIKAVYVDEKKSLVYIG 423 (795)
T ss_dssp ---SSCSCSSEEEEEECTTSC--EEEEESSSCEEEECTTTCCEE-EECCC------CCSCSCEEEEEEETTTTEEEEE
T ss_pred ---CCCCCCeeEEEEECCCCC--EEEEECCCCeEEEcCCCCcEE-EEecCCCCcccCCCCccEEEEEEcCCCCEEEEE
Confidence 001234699999988887 446777777999998876432 22111 01123344556667887 4443
No 264
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.16 E-value=0.00061 Score=62.02 Aligned_cols=161 Identities=9% Similarity=0.017 Sum_probs=105.5
Q ss_pred cceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCcee
Q psy4571 106 RQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLK 185 (437)
Q Consensus 106 v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~ 185 (437)
...++|++.++.++.+-...+.|..+++..... .. ..+...-.....+++.+.+..++.+-...+.|.+++++....
T Consensus 37 ~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~-~~-~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~- 113 (318)
T 3sov_A 37 AAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTES-VQ-NVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLR- 113 (318)
T ss_dssp EEEEEEEGGGTEEEEEETTTTEEEEEETTSSSC-CC-EEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSC-
T ss_pred cEEEEEEeCCCEEEEEECCCCcEEEEEccCCCc-eE-EEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcE-
Confidence 457889986566666666678899999874321 11 122222335678999987776667767788999999886332
Q ss_pred eeEeccCCCceEEEEEcCCCCcEEEEEe-CCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCe
Q psy4571 186 LHSFESHKDEIFQVQWSPHNETILASSG-TDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 264 (437)
Q Consensus 186 ~~~~~~h~~~v~~v~~~p~~~~~l~sg~-~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~ 264 (437)
.............+++.|.+..++.+-. ..+.|...++...... .+ ....-...+.|+++|++..
T Consensus 114 ~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~------------~~--~~~~l~~Pnglavd~~~~~ 179 (318)
T 3sov_A 114 KVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRF------------II--INSEIYWPNGLTLDYEEQK 179 (318)
T ss_dssp EEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCE------------EE--ECSSCSCEEEEEEETTTTE
T ss_pred EEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeE------------EE--EECCCCCccEEEEeccCCE
Confidence 2222233456789999997665555542 3578888887653211 01 1122235689999998876
Q ss_pred EEEEEeCCCeEEEEeCCCC
Q psy4571 265 VICSVSEDNIMQEYCDSTD 283 (437)
Q Consensus 265 ~l~s~~~dg~i~iwd~~~~ 283 (437)
+.++-+..+.|..+|+...
T Consensus 180 lY~aD~~~~~I~~~d~dG~ 198 (318)
T 3sov_A 180 LYWADAKLNFIHKSNLDGT 198 (318)
T ss_dssp EEEEETTTTEEEEEETTSC
T ss_pred EEEEECCCCEEEEEcCCCC
Confidence 7777778899999998753
No 265
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.16 E-value=1.1e-05 Score=82.01 Aligned_cols=165 Identities=9% Similarity=-0.022 Sum_probs=100.2
Q ss_pred CCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCC-CCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCC
Q psy4571 104 LSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNV-SKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNL 182 (437)
Q Consensus 104 ~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~-~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~ 182 (437)
..+..++|++.++.++.+-...+.|+.+++..... ......+.........|++.+.+..++++-...+.|.+.++...
T Consensus 406 ~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~ 485 (699)
T 1n7d_A 406 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 485 (699)
T ss_dssp TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSC
T ss_pred cceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCC
Confidence 45778999995555555555668899999874100 11111111112234568888666665666667789999998864
Q ss_pred ceeeeEeccCCCceEEEEEcCCCCcEEEEEeCC-CeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccC
Q psy4571 183 KLKLHSFESHKDEIFQVQWSPHNETILASSGTD-RRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPN 261 (437)
Q Consensus 183 ~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~d-g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~ 261 (437)
.. ...+.........+++.|.+.+++++-... +.|.++++....... + ....-...+.|+|+|+
T Consensus 486 ~~-~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~------------l--~~~~l~~PnGlavd~~ 550 (699)
T 1n7d_A 486 KR-KTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS------------L--VTENIQWPNGITLDLL 550 (699)
T ss_dssp CE-EEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCE------------E--SCSSCSSCCCEEECTT
T ss_pred ce-EEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeE------------E--EeCCCCCccEEEEecc
Confidence 32 222222224457889999776655554333 678777765432110 0 1111234578999998
Q ss_pred CCeEEEEEeCCCeEEEEeCCCC
Q psy4571 262 EPWVICSVSEDNIMQEYCDSTD 283 (437)
Q Consensus 262 ~~~~l~s~~~dg~i~iwd~~~~ 283 (437)
+..++++-+..+.|..+++...
T Consensus 551 ~~~LY~aD~~~~~I~~~d~dG~ 572 (699)
T 1n7d_A 551 SGRLYWVDSKLHSISSIDVNGG 572 (699)
T ss_dssp TCCEEEEETTTTEEEEECSSSS
T ss_pred CCEEEEEecCCCeEEEEccCCC
Confidence 7767777788899999999753
No 266
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.15 E-value=0.00089 Score=62.34 Aligned_cols=239 Identities=6% Similarity=-0.080 Sum_probs=131.8
Q ss_pred cceEEEeeccCceEeeecCCCceeEEEecC-C--------CCeE-EEecCceEEEEEeeecccc---ccCCCc------c
Q psy4571 47 DDAVEERVINEEYKIWKKNTPFLYDLVVNN-Y--------VANI-SCILNISILFFEIIFTQNF---PFPLSR------Q 107 (437)
Q Consensus 47 ~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~-~--------~~~i-~~~~~~~i~~~~~~~~~~~---~~~~~v------~ 107 (437)
+..++.++.++.+..+|..++...-....+ . ...+ ....++.+..+|...++.. .....+ .
T Consensus 103 ~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~ 182 (376)
T 3q7m_A 103 GGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGES 182 (376)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEEETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCC
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEEECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCC
Confidence 567778888999999998766543221111 1 1122 3345677888886544322 111111 2
Q ss_pred eEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCC-------CeEEEEEeC--CCCcEEEEEeCCCeEEEEe
Q psy4571 108 DVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTA-------EVNCLSFNP--YSEYILATGSADKTVALWD 178 (437)
Q Consensus 108 ~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~-------~v~~l~~~~--~~~~~l~sgs~dg~i~lwd 178 (437)
..... +..++.++.+|.|..+|..+ ++.+........ .+..+.-.| .+. .++.++.++.+..+|
T Consensus 183 ~~~~~---~~~v~~g~~~g~l~~~d~~t---G~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~v~~~~~~g~l~~~d 255 (376)
T 3q7m_A 183 APTTA---FGAAVVGGDNGRVSAVLMEQ---GQMIWQQRISQATGSTEIDRLSDVDTTPVVVNG-VVFALAYNGNLTALD 255 (376)
T ss_dssp CCEEE---TTEEEECCTTTEEEEEETTT---CCEEEEEECCC-----------CCCCCCEEETT-EEEEECTTSCEEEEE
T ss_pred CcEEE---CCEEEEEcCCCEEEEEECCC---CcEEEEEecccCCCCcccccccccCCCcEEECC-EEEEEecCcEEEEEE
Confidence 22222 34677788899999999984 344433321110 000000011 134 377888899999999
Q ss_pred CCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEec-CccccEEEEE
Q psy4571 179 LRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHG-GHTAKISDFS 257 (437)
Q Consensus 179 ~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~l~ 257 (437)
.++++. +.... ......+... +.. +..++.++.|..+|..+++.... .. .....+....
T Consensus 256 ~~tG~~-~w~~~--~~~~~~~~~~--~~~-l~~~~~~g~l~~~d~~tG~~~w~--------------~~~~~~~~~~~~~ 315 (376)
T 3q7m_A 256 LRSGQI-MWKRE--LGSVNDFIVD--GNR-IYLVDQNDRVMALTIDGGVTLWT--------------QSDLLHRLLTSPV 315 (376)
T ss_dssp TTTCCE-EEEEC--CCCEEEEEEE--TTE-EEEEETTCCEEEEETTTCCEEEE--------------ECTTTTSCCCCCE
T ss_pred CCCCcE-Eeecc--CCCCCCceEE--CCE-EEEEcCCCeEEEEECCCCcEEEe--------------ecccCCCcccCCE
Confidence 998775 43333 2334444443 443 66777899999999988754322 21 1111111122
Q ss_pred EccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCc
Q psy4571 258 WNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPT 319 (437)
Q Consensus 258 ~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~ 319 (437)
. .+. .++.++.+|.+..+|..+++.+...... .......... .+..+..++.++.
T Consensus 316 ~--~~~-~l~v~~~~g~l~~~d~~tG~~~~~~~~~---~~~~~~~~~~-~~~~l~v~~~~G~ 370 (376)
T 3q7m_A 316 L--YNG-NLVVGDSEGYLHWINVEDGRFVAQQKVD---SSGFQTEPVA-ADGKLLIQAKDGT 370 (376)
T ss_dssp E--ETT-EEEEECTTSEEEEEETTTCCEEEEEECC---TTCBCSCCEE-ETTEEEEEBTTSC
T ss_pred E--ECC-EEEEEeCCCeEEEEECCCCcEEEEEecC---CCcceeCCEE-ECCEEEEEeCCCE
Confidence 2 234 5668888999999999999877665531 1111111111 2345556666666
No 267
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.14 E-value=9e-05 Score=64.52 Aligned_cols=190 Identities=8% Similarity=-0.054 Sum_probs=110.8
Q ss_pred eEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCC
Q psy4571 152 VNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQS 231 (437)
Q Consensus 152 v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~ 231 (437)
...+.|+. ..++.+.+.+|.|+.+|+++++. +..+ -..........++++.+++..-.++.+.+||..+.+...+
T Consensus 57 tqGL~~~~--~~Ly~stG~~g~v~~iD~~Tgkv-~~~~--l~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~t 131 (268)
T 3nok_A 57 TQGLVFHQ--GHFFESTGHQGTLRQLSLESAQP-VWME--RLGNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQRERT 131 (268)
T ss_dssp EEEEEEET--TEEEEEETTTTEEEECCSSCSSC-SEEE--ECTTCCEEEEEECSSCEEEEESSSCEEEEEETTTTEEEEE
T ss_pred cceEEEEC--CEEEEEcCCCCEEEEEECCCCcE-EeEE--CCCCcceeEEEEeCCEEEEEEccCCEEEEEECCcCcEEEE
Confidence 47888873 45788889999999999999776 4444 2233333222334555777777899999999998754333
Q ss_pred CCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeeccc--CCceeeeecCCCC
Q psy4571 232 TEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRS--NGGISSTASPTAS 309 (437)
Q Consensus 232 ~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~--~~~~~~~~s~~g~ 309 (437)
+.... .-..++ ++++.++++- .++.|.++|..+.+....+....... .....+.+. +|+
T Consensus 132 --------------i~~~~-eGwGLt--~Dg~~L~vSd-Gs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~ 192 (268)
T 3nok_A 132 --------------TRYSG-EGWGLC--YWNGKLVRSD-GGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGV 192 (268)
T ss_dssp --------------EECSS-CCCCEE--EETTEEEEEC-SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTE
T ss_pred --------------EeCCC-ceeEEe--cCCCEEEEEC-CCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCE
Confidence 32211 113333 5777566554 58899999999998888877643111 011223444 777
Q ss_pred cccccCCCCcccccccccccccccccchhhhhhhh--hcCCCccccccCCCCCCcccc
Q psy4571 310 STASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQ--LLGTEEESSDRHSSDNDTEDL 365 (437)
Q Consensus 310 ~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~--~~~h~~~~~~~~~~~~~~~~~ 365 (437)
+.+....+..+.+.+....+.+..+|+........ ...-.+..+.+++.|++..+.
T Consensus 193 lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlf 250 (268)
T 3nok_A 193 IYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIF 250 (268)
T ss_dssp EEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEE
T ss_pred EEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEE
Confidence 66665556664444444444444444432211110 011223456677887665433
No 268
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.12 E-value=0.00015 Score=73.36 Aligned_cols=121 Identities=12% Similarity=0.097 Sum_probs=75.1
Q ss_pred CCCcceEEeeCCCCCEEEEEECCC-----------cEEEEEcCCCCCCCCeeeec-cCCCCeEEEEEeCCCCcEEEEEeC
Q psy4571 103 PLSRQDVAWHLLHESLFGSVADDQ-----------KLMIWDTRSHNVSKPSHTVD-AHTAEVNCLSFNPYSEYILATGSA 170 (437)
Q Consensus 103 ~~~v~~~~~sp~~~~~l~~~~~dg-----------~v~vwd~~~~~~~~~~~~~~-~h~~~v~~l~~~~~~~~~l~sgs~ 170 (437)
+..-..+++.|.++.+++.|+.++ .+.+||+.+.. ...+..+. .+.....++++.+++. +++.|+.
T Consensus 185 P~~~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~-w~~~~~~~~~~~~~~~~~~~~~~g~-lyv~GG~ 262 (656)
T 1k3i_A 185 PIVPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGI-VSDRTVTVTKHDMFCPGISMDGNGQ-IVVTGGN 262 (656)
T ss_dssp SSCCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCC-BCCCEEEECSCCCSSCEEEECTTSC-EEEECSS
T ss_pred CCCceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCc-EEeCcccCCCCCCccccccCCCCCC-EEEeCCC
Confidence 334456777775677888887543 58899998653 33333332 2333344577788888 6888874
Q ss_pred -CCeEEEEeCCCCceee-eEeccCCCceEEEEEcCCCCcEEEEEe-CC-----CeEEEEEcCCCC
Q psy4571 171 -DKTVALWDLRNLKLKL-HSFESHKDEIFQVQWSPHNETILASSG-TD-----RRLHVWDLSKIG 227 (437)
Q Consensus 171 -dg~i~lwd~~~~~~~~-~~~~~h~~~v~~v~~~p~~~~~l~sg~-~d-----g~i~vwd~~~~~ 227 (437)
+..+.+||..+.+... ..+. ....-.+++..++++ +++.|+ .+ ..+.+||..+..
T Consensus 263 ~~~~v~~yd~~t~~W~~~~~~~-~~R~~~s~~~~~dg~-iyv~GG~~~~~~~~~~~e~yd~~t~~ 325 (656)
T 1k3i_A 263 DAKKTSLYDSSSDSWIPGPDMQ-VARGYQSSATMSDGR-VFTIGGSWSGGVFEKNGEVYSPSSKT 325 (656)
T ss_dssp STTCEEEEEGGGTEEEECCCCS-SCCSSCEEEECTTSC-EEEECCCCCSSSCCCCEEEEETTTTE
T ss_pred CCCceEEecCcCCceeECCCCC-ccccccceEEecCCe-EEEEeCcccCCcccccceEeCCCCCc
Confidence 5689999998754311 1111 111123456667887 688887 34 468999997653
No 269
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.11 E-value=0.00089 Score=58.45 Aligned_cols=200 Identities=10% Similarity=0.126 Sum_probs=125.6
Q ss_pred CCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeec-cCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCC
Q psy4571 103 PLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVD-AHTAEVNCLSFNPYSEYILATGSADKTVALWDLRN 181 (437)
Q Consensus 103 ~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~-~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~ 181 (437)
...+..++|+|+++.++++...++.|...|.. .+.++.+. +-....-.|++.+++.+ +++.-.++.+.++++..
T Consensus 26 ~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~----g~v~~~i~l~g~~D~EGIa~~~~g~~-~vs~E~~~~l~~~~v~~ 100 (255)
T 3qqz_A 26 TNNISSLTWSAQSNTLFSTINKPAAIVEMTTN----GDLIRTIPLDFVKDLETIEYIGDNQF-VISDERDYAIYVISLTP 100 (255)
T ss_dssp CSCEEEEEEETTTTEEEEEEETTEEEEEEETT----CCEEEEEECSSCSSEEEEEECSTTEE-EEEETTTTEEEEEEECT
T ss_pred ccCcceeEEeCCCCEEEEEECCCCeEEEEeCC----CCEEEEEecCCCCChHHeEEeCCCEE-EEEECCCCcEEEEEcCC
Confidence 34688999999766677778888888888886 34444442 22256788999988873 56655678899998765
Q ss_pred Cce--eeeEec------cCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEE----ecCc
Q psy4571 182 LKL--KLHSFE------SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFI----HGGH 249 (437)
Q Consensus 182 ~~~--~~~~~~------~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~----~~~h 249 (437)
... .+.... ..+.....++|+|.++.++++.-.+ ...+|.+... .... ....+.. ...+
T Consensus 101 ~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~-p~~i~~~~g~--~~~~------~l~i~~~~~~~~~~~ 171 (255)
T 3qqz_A 101 NSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKN-PIEVYKVNGL--LSSN------ELHISKDKALQRQFT 171 (255)
T ss_dssp TCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESS-SEEEEEEEST--TCSS------CCEEEECHHHHHTCC
T ss_pred CCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcC-CceEEEEccc--ccCC------ceeeecchhhccccc
Confidence 442 111111 2345578999999997655555444 3444444311 0000 0000000 0112
Q ss_pred cccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeeccc------CCceeeeecCCCCcccccCCC
Q psy4571 250 TAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRS------NGGISSTASPTASSTASESPT 317 (437)
Q Consensus 250 ~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~------~~~~~~~~s~~g~~l~s~s~d 317 (437)
...+.+++++|....+++....+..+.++|.. ++....+.+..... ...--+++.++|++.+++..+
T Consensus 172 ~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE~n 244 (255)
T 3qqz_A 172 LDDVSGAEFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEPN 244 (255)
T ss_dssp SSCCCEEEEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEETTT
T ss_pred cCCceeEEEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEcCCc
Confidence 33578999999888788888889999999977 44666665543211 234557999999877765443
No 270
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.05 E-value=0.00032 Score=70.86 Aligned_cols=184 Identities=11% Similarity=0.063 Sum_probs=106.5
Q ss_pred eEEeeCCCCCEEEEEECCC-------------------cEEEEEcCCCCCCCCeeeecc--CC-------CCeEEEEEeC
Q psy4571 108 DVAWHLLHESLFGSVADDQ-------------------KLMIWDTRSHNVSKPSHTVDA--HT-------AEVNCLSFNP 159 (437)
Q Consensus 108 ~~~~sp~~~~~l~~~~~dg-------------------~v~vwd~~~~~~~~~~~~~~~--h~-------~~v~~l~~~~ 159 (437)
.+++.| ..++++.++.++ .|..+|.++ ++.+..++. |. .+.....+..
T Consensus 234 ~~a~d~-~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~t---G~~~W~~~~~~~~~wd~~~~~~~~~~d~~~ 309 (668)
T 1kv9_A 234 SMAYDP-ELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDT---GKLAWHYQVTPGDSWDFTATQQITLAELNI 309 (668)
T ss_dssp CEEEET-TTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTT---CCEEEEEESSTTCCSCCCCCSCEEEEEEEE
T ss_pred ceEEcC-CCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCC---CceeeEeecCCCccccccCCCCcEEEEecc
Confidence 468888 456777777665 388899884 455544432 22 2333333334
Q ss_pred CCC--cEEEEEeCCCeEEEEeCCCCceeeeEeccCC------------Cce------------------------EEEEE
Q psy4571 160 YSE--YILATGSADKTVALWDLRNLKLKLHSFESHK------------DEI------------------------FQVQW 201 (437)
Q Consensus 160 ~~~--~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~------------~~v------------------------~~v~~ 201 (437)
+|+ .+++.++.+|.+.++|.++++. +....... .++ ..+++
T Consensus 310 ~G~~~~~v~~~~~~G~l~~lD~~tG~~-l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~ 388 (668)
T 1kv9_A 310 DGKPRKVLMQAPKNGFFYVLDRTNGKL-ISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSF 388 (668)
T ss_dssp TTEEEEEEEECCTTSEEEEEETTTCCE-EEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEE
T ss_pred CCcEEEEEEEECCCCEEEEEECCCCCE-eccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceE
Confidence 554 2488999999999999999775 32111100 000 12677
Q ss_pred cCCCCcEEEEE-----------------------------------eCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEe
Q psy4571 202 SPHNETILASS-----------------------------------GTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIH 246 (437)
Q Consensus 202 ~p~~~~~l~sg-----------------------------------~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 246 (437)
+|+...+++.. ..+|.|..||+.+++... ..
T Consensus 389 dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W--------------~~ 454 (668)
T 1kv9_A 389 NPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAW--------------KV 454 (668)
T ss_dssp ETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEE--------------EE
T ss_pred CCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEE--------------Ec
Confidence 77765333211 123778888888764322 22
Q ss_pred cCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCC-ccccc
Q psy4571 247 GGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTAS-STASE 314 (437)
Q Consensus 247 ~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~-~l~s~ 314 (437)
..+ .......+...+. +++.++.|+.++.||.++++.+..+....... ...+.+..+|+ +++.+
T Consensus 455 ~~~-~~~~~~~~~t~gg-~vf~g~~dg~l~a~d~~tG~~l~~~~~~~~~~--~~p~~~~~~G~~yva~~ 519 (668)
T 1kv9_A 455 PYP-THWNGGTLSTAGN-LVFQGTAAGQMHAYSADKGEALWQFEAQSGIV--AAPMTFELAGRQYVAIM 519 (668)
T ss_dssp EES-SSCCCCEEEETTT-EEEEECTTSEEEEEETTTCCEEEEEECSSCCC--SCCEEEEETTEEEEEEE
T ss_pred cCC-CCCcCceeEeCCC-EEEEECCcccchhhhhhcChhheEecCCCCcc--cCceEEEECCEEEEEEE
Confidence 211 1222233444566 67788999999999999999888877532111 12234455666 44433
No 271
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.01 E-value=0.0011 Score=65.59 Aligned_cols=174 Identities=11% Similarity=0.009 Sum_probs=99.1
Q ss_pred EEEeCCCCcEEEEEeCC----------------CeEEEEeCCCCceeeeEecc--C--------CCceEEEEEcCCCC--
Q psy4571 155 LSFNPYSEYILATGSAD----------------KTVALWDLRNLKLKLHSFES--H--------KDEIFQVQWSPHNE-- 206 (437)
Q Consensus 155 l~~~~~~~~~l~sgs~d----------------g~i~lwd~~~~~~~~~~~~~--h--------~~~v~~v~~~p~~~-- 206 (437)
+++.++... ++.++.+ +.|..+|.++++. +..+.. | ..++ -+...++|+
T Consensus 240 ~a~d~~~g~-vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~-~W~~~~~~~d~~d~~~~~~p~-l~~~~~~G~~~ 316 (571)
T 2ad6_A 240 YAYDPKLNL-FYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMA-KWGYQKTPHDEWDFAGVNQMV-LTDQPVNGKMT 316 (571)
T ss_dssp CEEETTTTE-EEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCE-EEEEESSTTCSSCCCCCCCCE-EEEEEETTEEE
T ss_pred EEEcCCCCe-EEEECCCCccccCCccCCCceeEEEEEEEecCCCcE-EEEecCCCCcccccccCCCCE-EEecccCCcEE
Confidence 566776553 5555432 3699999999776 444432 1 1222 123334664
Q ss_pred cEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCC---------CCceEE--------------EecCccc--cEEEEEEccC
Q psy4571 207 TILASSGTDRRLHVWDLSKIGEEQSTEDAEDG---------PPELLF--------------IHGGHTA--KISDFSWNPN 261 (437)
Q Consensus 207 ~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~---------~~~~~~--------------~~~~h~~--~v~~l~~~p~ 261 (437)
.+++.++.+|.+.++|..+++........... ...++. ...+..+ .-..++++|+
T Consensus 317 ~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~ 396 (571)
T 2ad6_A 317 PLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPE 396 (571)
T ss_dssp EEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETT
T ss_pred EEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCC
Confidence 35778899999999999988754332111000 000110 0000000 0124677787
Q ss_pred CCeEEEEEe-------------------------------------CCCeEEEEeCCCCCCceeeeeeecccCCceeeee
Q psy4571 262 EPWVICSVS-------------------------------------EDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTA 304 (437)
Q Consensus 262 ~~~~l~s~~-------------------------------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (437)
.. +++... .+|.|..||+.+++....+.... .......
T Consensus 397 ~g-~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~----~~~~~~~ 471 (571)
T 2ad6_A 397 SR-TLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKF----AAWGGTL 471 (571)
T ss_dssp TT-EEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESS----CCCSBCE
T ss_pred CC-EEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCCC----CccceeE
Confidence 77 333332 35889999999998776665421 1222233
Q ss_pred cCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcC
Q psy4571 305 SPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLG 347 (437)
Q Consensus 305 s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~ 347 (437)
...+..++.++.++. ++.+|..+|+++-++.-
T Consensus 472 ~t~gg~v~~g~~dg~-----------l~a~D~~tG~~lw~~~~ 503 (571)
T 2ad6_A 472 YTKGGLVWYATLDGY-----------LKALDNKDGKELWNFKM 503 (571)
T ss_dssp EETTTEEEEECTTSE-----------EEEEETTTCCEEEEEEC
T ss_pred EECCCEEEEEcCCCe-----------EEEEECCCCCEEEEEeC
Confidence 334566666888887 78999999988876643
No 272
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.00 E-value=0.012 Score=60.25 Aligned_cols=168 Identities=9% Similarity=0.048 Sum_probs=109.8
Q ss_pred CCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeee-ccCCCCeEEEEEeCCCCcEEEEEeCC-CeEEEEeCCC
Q psy4571 104 LSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTV-DAHTAEVNCLSFNPYSEYILATGSAD-KTVALWDLRN 181 (437)
Q Consensus 104 ~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~-~~h~~~v~~l~~~~~~~~~l~sgs~d-g~i~lwd~~~ 181 (437)
.....|++.+.+++++.+-...+.|.+.++.. .....+ .........|+++|.+.+|+.+-... +.|...++..
T Consensus 471 ~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG----~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG 546 (791)
T 3m0c_C 471 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG----VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG 546 (791)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTS----SSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS
T ss_pred CCcceeeeeecCCcEEEEecCCCeEEEEeCCC----CeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCC
Confidence 35678999986667777777788999999873 223333 23345689999999877645544333 7899999876
Q ss_pred CceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccC
Q psy4571 182 LKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPN 261 (437)
Q Consensus 182 ~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~ 261 (437)
... .......-.....|++.+.+..++++-...+.|...++...... .+....+.-....+|++ .
T Consensus 547 ~~~-~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~------------~v~~~~~~l~~P~glav--~ 611 (791)
T 3m0c_C 547 VDI-YSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRK------------TILEDEKRLAHPFSLAV--F 611 (791)
T ss_dssp CCE-EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE------------EEEECTTTTSSEEEEEE--E
T ss_pred Cce-EEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceE------------EEecCCCccCCCCEEEE--e
Confidence 332 22333333567899999887766666666778999998654221 11111111223456666 3
Q ss_pred CCeEEEEEeCCCeEEEEeCCCCCCceeee
Q psy4571 262 EPWVICSVSEDNIMQEYCDSTDSDTKTMR 290 (437)
Q Consensus 262 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 290 (437)
+.+++++-...+.|...|..+++....+.
T Consensus 612 ~~~lYwtD~~~~~I~~~dk~tG~~~~~l~ 640 (791)
T 3m0c_C 612 EDKVFWTDIINEAIFSANRLTGSDVNLLA 640 (791)
T ss_dssp TTEEEEEETTTTEEEEEETTTCCCCEEEE
T ss_pred CCEEEEEECCCCEEEEEeCCCCcceEEee
Confidence 44477777788999999988887766654
No 273
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.99 E-value=0.002 Score=63.75 Aligned_cols=162 Identities=10% Similarity=0.014 Sum_probs=92.2
Q ss_pred cEEEEEcCCCCCCCCeeeecc--C--------CCCeEEEEEeCCCC--cEEEEEeCCCeEEEEeCCCCceeeeEeccCC-
Q psy4571 127 KLMIWDTRSHNVSKPSHTVDA--H--------TAEVNCLSFNPYSE--YILATGSADKTVALWDLRNLKLKLHSFESHK- 193 (437)
Q Consensus 127 ~v~vwd~~~~~~~~~~~~~~~--h--------~~~v~~l~~~~~~~--~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~- 193 (437)
.|..+|.++ ++.+-.++. | ..++. +...++|+ .+++.++.+|.+.+.|.++++. +.......
T Consensus 273 ~v~Ald~~t---G~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~-~w~~~~~~~ 347 (571)
T 2ad6_A 273 TIWGRDLDT---GMAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNRENGNL-IVAEKVDPA 347 (571)
T ss_dssp EEEEEETTT---CCEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTTCCE-EEEEESSTT
T ss_pred EEEEEecCC---CcEEEEecCCCCcccccccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCCCCE-EeeecccCC
Confidence 588899884 444444331 2 12222 23334664 3578899999999999999775 33322110
Q ss_pred ------------Cce--------------------------EEEEEcCCCCcEEEEEe----------------------
Q psy4571 194 ------------DEI--------------------------FQVQWSPHNETILASSG---------------------- 213 (437)
Q Consensus 194 ------------~~v--------------------------~~v~~~p~~~~~l~sg~---------------------- 213 (437)
.++ ..++++|+... ++...
T Consensus 348 ~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~-~yv~~~~~~~~~~~~~~~~~~g~~~~g 426 (571)
T 2ad6_A 348 VNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRT-LYAGLNHICMDWEPFMLPYRAGQFFVG 426 (571)
T ss_dssp CCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTE-EEEEEECEEEEEEECCCCCCTTSCCCC
T ss_pred ccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCE-EEEEchhccccccccccccccCCcccc
Confidence 111 23578887764 44432
Q ss_pred ---------------CCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEE
Q psy4571 214 ---------------TDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEY 278 (437)
Q Consensus 214 ---------------~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iw 278 (437)
.+|.|..||+.+++...+ ... ...+.+......+. +++.++.||.++.+
T Consensus 427 ~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~--------------~~~-~~~~~~~~~~t~gg-~v~~g~~dg~l~a~ 490 (571)
T 2ad6_A 427 ATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWT--------------KWE-KFAAWGGTLYTKGG-LVWYATLDGYLKAL 490 (571)
T ss_dssp EEEEEEECTTSTTSCCCEEEEEECTTTCCEEEE--------------EEE-SSCCCSBCEEETTT-EEEEECTTSEEEEE
T ss_pred ccceeccCccccCCCCCCeEEEEECCCCCEEEE--------------ecC-CCCccceeEEECCC-EEEEEcCCCeEEEE
Confidence 346788888777643222 211 11112222223455 56678999999999
Q ss_pred eCCCCCCceeeeeeecccCCceeeeecCCCCccc
Q psy4571 279 CDSTDSDTKTMRLDSIRSNGGISSTASPTASSTA 312 (437)
Q Consensus 279 d~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~ 312 (437)
|.++++.+..+....... ...+.+..+|+.++
T Consensus 491 D~~tG~~lw~~~~~~~~~--~~p~~~~~~G~~yv 522 (571)
T 2ad6_A 491 DNKDGKELWNFKMPSGGI--GSPMTYSFKGKQYI 522 (571)
T ss_dssp ETTTCCEEEEEECSSCCC--SCCEEEEETTEEEE
T ss_pred ECCCCCEEEEEeCCCCcE--eeeEEEEECCEEEE
Confidence 999999988877532111 12234456776443
No 274
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.99 E-value=0.006 Score=60.93 Aligned_cols=162 Identities=5% Similarity=0.006 Sum_probs=109.1
Q ss_pred CcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCce
Q psy4571 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKL 184 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~ 184 (437)
.+..++|++.++.++.+-..++.|..+++... .....+.........+++.+.+.++..+-...+.|.+.+++....
T Consensus 38 ~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~---~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~ 114 (628)
T 4a0p_A 38 EASALDFDVTDNRIYWTDISLKTISRAFMNGS---ALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHR 114 (628)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSC---SCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTC
T ss_pred ceEEEEEECCCCEEEEEECCCCeEEEEECCCC---CcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcE
Confidence 46689999966666767667889999998732 222222222245778999988777667777788999999976432
Q ss_pred eeeEeccCCCceEEEEEcCCCCcEEEEE-eCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCC
Q psy4571 185 KLHSFESHKDEIFQVQWSPHNETILASS-GTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEP 263 (437)
Q Consensus 185 ~~~~~~~h~~~v~~v~~~p~~~~~l~sg-~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~ 263 (437)
.......-.....+++.|....++.+- +..+.|...++..... ..+ . ..-.....|++.++++
T Consensus 115 -~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~------------~~l--~-~~~~~P~GlalD~~~~ 178 (628)
T 4a0p_A 115 -QVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSER------------TTL--V-PNVGRANGLTIDYAKR 178 (628)
T ss_dssp -EEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC------------EEE--E-CSCSSEEEEEEETTTT
T ss_pred -EEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCce------------EEE--E-CCCCCcceEEEccccC
Confidence 222223335578999999766556554 2356788888765421 111 1 2234678999999887
Q ss_pred eEEEEEeCCCeEEEEeCCCCCC
Q psy4571 264 WVICSVSEDNIMQEYCDSTDSD 285 (437)
Q Consensus 264 ~~l~s~~~dg~i~iwd~~~~~~ 285 (437)
.+.++-...+.|...|+.....
T Consensus 179 ~LY~aD~~~~~I~~~d~dG~~~ 200 (628)
T 4a0p_A 179 RLYWTDLDTNLIESSNMLGLNR 200 (628)
T ss_dssp EEEEEETTTTEEEEEETTSCSC
T ss_pred EEEEEECCCCEEEEEcCCCCce
Confidence 6777777889999999976543
No 275
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.89 E-value=0.018 Score=59.25 Aligned_cols=257 Identities=9% Similarity=-0.014 Sum_probs=143.9
Q ss_pred cccceeEEEEeeCCCcceEEEeeccCceEeeecCCC--------------------ceeEEEecCCCCeEEEecCceEEE
Q psy4571 32 HSIYRFYRLCVAEPFDDAVEERVINEEYKIWKKNTP--------------------FLYDLVVNNYVANISCILNISILF 91 (437)
Q Consensus 32 ~~~~~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~--------------------~~~~~~~~~~~~~i~~~~~~~i~~ 91 (437)
+....|.+++.. +++. |-.|..++-+..++...+ .+..+.....+..-.+..++.+..
T Consensus 310 l~~~~v~~i~~D-~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt~~~Gl~~ 387 (781)
T 3v9f_A 310 LSNASARYIFQD-SFNN-IWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGKLWIGTDGGGINV 387 (781)
T ss_dssp BSSSCEEEEEEC-SSCC-EEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSCEEEEEBSSCEEE
T ss_pred CCCCeEEEEEEe-CCCC-EEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCCEEEEeCCCcEEE
Confidence 344568888888 6665 445665555666654322 233343333333334444556777
Q ss_pred EEeeeccccc-------cCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeec---cCCCCeEEEEEeCCC
Q psy4571 92 FEIIFTQNFP-------FPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVD---AHTAEVNCLSFNPYS 161 (437)
Q Consensus 92 ~~~~~~~~~~-------~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~---~h~~~v~~l~~~~~~ 161 (437)
++........ ....|.++...+ ++.+. .|+.++-|..+|..++ + ...+. .....|.++...+++
T Consensus 388 ~~~~~~~~~~~~~~~~~~~~~v~~i~~d~-~g~lW-igt~~~Gl~~~~~~~~---~-~~~~~~~~~~~~~v~~i~~d~~g 461 (781)
T 3v9f_A 388 FENGKRVAIYNKENRELLSNSVLCSLKDS-EGNLW-FGTYLGNISYYNTRLK---K-FQIIELEKNELLDVRVFYEDKNK 461 (781)
T ss_dssp EETTEEEEECC-----CCCSBEEEEEECT-TSCEE-EEETTEEEEEECSSSC---E-EEECCSTTTCCCCEEEEEECTTS
T ss_pred EECCCCeEEEccCCCCCCCcceEEEEECC-CCCEE-EEeccCCEEEEcCCCC---c-EEEeccCCCCCCeEEEEEECCCC
Confidence 7744322111 123567777766 34444 5777667888887632 1 22221 234579999888877
Q ss_pred CcEEEEEeCCCeEEEEeCCCCceeeeEeccC-----CCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCC
Q psy4571 162 EYILATGSADKTVALWDLRNLKLKLHSFESH-----KDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAE 236 (437)
Q Consensus 162 ~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h-----~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~ 236 (437)
. |..|+. +-|..+|..+.+. ....... ...|.++...++|. +..|+.++-+..+|..+.....-
T Consensus 462 ~--lwigt~-~Gl~~~~~~~~~~-~~~~~~~~~~~~~~~i~~i~~d~~g~--lWigt~~~Gl~~~~~~~~~~~~~----- 530 (781)
T 3v9f_A 462 K--IWIGTH-AGVFVIDLASKKV-IHHYDTSNSQLLENFVRSIAQDSEGR--FWIGTFGGGVGIYTPDMQLVRKF----- 530 (781)
T ss_dssp E--EEEEET-TEEEEEESSSSSC-CEEECTTTSSCSCSCEEEEEECTTCC--EEEEESSSCEEEECTTCCEEEEE-----
T ss_pred C--EEEEEC-CceEEEeCCCCeE-EecccCcccccccceeEEEEEcCCCC--EEEEEcCCCEEEEeCCCCeEEEc-----
Confidence 6 555666 5588899887443 1111111 35789999999887 34455544477788765321110
Q ss_pred CCCCceEEEec-CccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeee-cccCCceeeeecCCCCccccc
Q psy4571 237 DGPPELLFIHG-GHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDS-IRSNGGISSTASPTASSTASE 314 (437)
Q Consensus 237 ~~~~~~~~~~~-~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~s~~g~~l~s~ 314 (437)
.... -....|.++...++|. +. .++.+|.+..||..+++. ..+.... .....+..+...++|.+.+++
T Consensus 531 -------~~~~~l~~~~i~~i~~d~~g~-lW-i~T~~Glv~~~d~~~~~~-~~~~~~~gl~~~~i~~i~~d~~g~lW~~t 600 (781)
T 3v9f_A 531 -------NQYEGFCSNTINQIYRSSKGQ-MW-LATGEGLVCFPSARNFDY-QVFQRKEGLPNTHIRAISEDKNGNIWAST 600 (781)
T ss_dssp -------CTTTTCSCSCEEEEEECTTSC-EE-EEETTEEEEESCTTTCCC-EEECGGGTCSCCCCCEEEECSSSCEEEEC
T ss_pred -------cCCCCCCCCeeEEEEECCCCC-EE-EEECCCceEEECCCCCcE-EEccccCCCCCceEEEEEECCCCCEEEEc
Confidence 0000 1134689999988888 44 344477658899877643 3332211 112234445667788877765
Q ss_pred CCCC
Q psy4571 315 SPTP 318 (437)
Q Consensus 315 s~d~ 318 (437)
..|
T Consensus 601 -~~G 603 (781)
T 3v9f_A 601 -NTG 603 (781)
T ss_dssp -SSC
T ss_pred -CCc
Confidence 344
No 276
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.87 E-value=0.0066 Score=62.57 Aligned_cols=194 Identities=9% Similarity=-0.033 Sum_probs=110.2
Q ss_pred CCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCc
Q psy4571 104 LSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLK 183 (437)
Q Consensus 104 ~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~ 183 (437)
..|.++...+ ++.+ -.|+.++-|..||..+................|.++...+++. |..|+.++-|..+|.++++
T Consensus 363 ~~v~~i~~d~-~g~l-Wigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~--lWigt~~~Gl~~~~~~~~~ 438 (781)
T 3v9f_A 363 KVVSSVCDDG-QGKL-WIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGN--LWFGTYLGNISYYNTRLKK 438 (781)
T ss_dssp SCEEEEEECT-TSCE-EEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSC--EEEEETTEEEEEECSSSCE
T ss_pred cceEEEEEcC-CCCE-EEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCC--EEEEeccCCEEEEcCCCCc
Confidence 3577787776 3444 4566566688888763211000000012346799999888776 6668877789999987644
Q ss_pred eeeeEec---cCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEcc
Q psy4571 184 LKLHSFE---SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNP 260 (437)
Q Consensus 184 ~~~~~~~---~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p 260 (437)
...+. .....|.++...+++. +..|+. +-|..+|..+......... . . .......|.++...+
T Consensus 439 --~~~~~~~~~~~~~v~~i~~d~~g~--lwigt~-~Gl~~~~~~~~~~~~~~~~-~--~------~~~~~~~i~~i~~d~ 504 (781)
T 3v9f_A 439 --FQIIELEKNELLDVRVFYEDKNKK--IWIGTH-AGVFVIDLASKKVIHHYDT-S--N------SQLLENFVRSIAQDS 504 (781)
T ss_dssp --EEECCSTTTCCCCEEEEEECTTSE--EEEEET-TEEEEEESSSSSCCEEECT-T--T------SSCSCSCEEEEEECT
T ss_pred --EEEeccCCCCCCeEEEEEECCCCC--EEEEEC-CceEEEeCCCCeEEecccC-c--c------cccccceeEEEEEcC
Confidence 23332 1346789999888886 444555 5688899876432111000 0 0 001135789999999
Q ss_pred CCCeEEEEEeCCCeEEEEeCCCCCCceeeeee-ecccCCceeeeecCCCCcccccCCCCc
Q psy4571 261 NEPWVICSVSEDNIMQEYCDSTDSDTKTMRLD-SIRSNGGISSTASPTASSTASESPTPT 319 (437)
Q Consensus 261 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~s~~g~~l~s~s~d~~ 319 (437)
+|. +. .|+.++-+..+|..+++. ..+... ......+..+...++|.+.++.. .|.
T Consensus 505 ~g~-lW-igt~~~Gl~~~~~~~~~~-~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~-~Gl 560 (781)
T 3v9f_A 505 EGR-FW-IGTFGGGVGIYTPDMQLV-RKFNQYEGFCSNTINQIYRSSKGQMWLATG-EGL 560 (781)
T ss_dssp TCC-EE-EEESSSCEEEECTTCCEE-EEECTTTTCSCSCEEEEEECTTSCEEEEET-TEE
T ss_pred CCC-EE-EEEcCCCEEEEeCCCCeE-EEccCCCCCCCCeeEEEEECCCCCEEEEEC-CCc
Confidence 888 44 445434477788776532 222211 11122334456677888766554 554
No 277
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.84 E-value=0.0045 Score=61.38 Aligned_cols=61 Identities=8% Similarity=-0.151 Sum_probs=41.5
Q ss_pred CCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhc
Q psy4571 271 EDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLL 346 (437)
Q Consensus 271 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~ 346 (437)
.+|.+..||+.+++.+....... ..........+.+++.++.|+. ++.+|..+|+++-++.
T Consensus 451 ~~G~l~A~D~~tG~~~W~~~~~~----~~~~g~~~tagg~vf~gt~dg~-----------l~A~D~~tG~~lW~~~ 511 (599)
T 1w6s_A 451 GLGQIKAYNAITGDYKWEKMERF----AVWGGTMATAGDLVFYGTLDGY-----------LKARDSDTGDLLWKFK 511 (599)
T ss_dssp CCEEEEEECTTTCCEEEEEEESS----CCCSBCEEETTTEEEEECTTSE-----------EEEEETTTCCEEEEEE
T ss_pred CcCeEEEEECCCCCEEeEecCCC----CccCcceEecCCEEEEECCCCe-----------EEEEECCCCCEEEEee
Confidence 35789999999998776665321 1111223345666777888887 7888999998876653
No 278
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.82 E-value=0.0027 Score=65.04 Aligned_cols=195 Identities=9% Similarity=0.060 Sum_probs=107.0
Q ss_pred eeEEEec-CCCCeEEEecC--c----eEEEEEeeec-cccc--cCCCcceEEeeCCCCCEEEEEECC-----CcEEEEEc
Q psy4571 69 LYDLVVN-NYVANISCILN--I----SILFFEIIFT-QNFP--FPLSRQDVAWHLLHESLFGSVADD-----QKLMIWDT 133 (437)
Q Consensus 69 ~~~~~~~-~~~~~i~~~~~--~----~i~~~~~~~~-~~~~--~~~~v~~~~~sp~~~~~l~~~~~d-----g~v~vwd~ 133 (437)
+....++ +++..++...+ | .|.++|+..+ +... .......++|+|+ ++.|+....+ ..|.++++
T Consensus 176 ~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~~~~~~~WspD-g~~l~y~~~d~~~~~~~v~~~~l 254 (751)
T 2xe4_A 176 VMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSGTNGEIVWGPD-HTSLFYVTKDETLRENKVWRHVM 254 (751)
T ss_dssp EEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEEECSCCEECSS-TTEEEEEEECTTCCEEEEEEEET
T ss_pred EeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccccCceeeEEEecC-CCEEEEEEECCCCCCCEEEEEEC
Confidence 4556778 88877754432 2 4888888776 4222 1223457899995 4444444443 25777887
Q ss_pred CCCCCCCCeeeec-cCCCCeEEEEEeCCCCcEEEEEeC--CCeEEEEeCCCCceee--eEe-ccCCCceEEEEEcCCCCc
Q psy4571 134 RSHNVSKPSHTVD-AHTAEVNCLSFNPYSEYILATGSA--DKTVALWDLRNLKLKL--HSF-ESHKDEIFQVQWSPHNET 207 (437)
Q Consensus 134 ~~~~~~~~~~~~~-~h~~~v~~l~~~~~~~~~l~sgs~--dg~i~lwd~~~~~~~~--~~~-~~h~~~v~~v~~~p~~~~ 207 (437)
.++.. .....+. ........+.|+|||++++++... ...|.++|+.++.... ..+ ........++.|+. |..
T Consensus 255 gt~~~-~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~-g~~ 332 (751)
T 2xe4_A 255 GKLQS-EDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHG-TSH 332 (751)
T ss_dssp TSCGG-GCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEET-TTE
T ss_pred CCCch-hcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeee-CCE
Confidence 64321 1122222 223346788999999985555543 3458888988753212 333 23345556666554 555
Q ss_pred EEEEEeCC----CeEEEEEcCCCCCCCCCCCCCCCCCce-EEEecCccccEEEEEEccCCCeEEEEEeCCCeEE--EEeC
Q psy4571 208 ILASSGTD----RRLHVWDLSKIGEEQSTEDAEDGPPEL-LFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ--EYCD 280 (437)
Q Consensus 208 ~l~sg~~d----g~i~vwd~~~~~~~~~~~~~~~~~~~~-~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~--iwd~ 280 (437)
+++....+ ..|..+|+.+.... .. +. .......+..+.+ .+..++++...|+..+ ++|+
T Consensus 333 l~~~t~~~~a~~~~L~~~d~~~~~~~-----------~~~li-~~~~~~~l~~~~~--~~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 333 LVILTNEGGAVNHKLLIAPRGQPSDW-----------SHVLV-DHSEDVFMESIAV--RSNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp EEEEECTTTCTTCEEEEEETTSTTCC-----------CCEEE-CCCSSEEEEEEEE--CSSEEEEEEEETTEEEEEEEEC
T ss_pred EEEEeCCCCCCCcEEEEEcCCCcccc-----------eeeEE-CCCCCcEEEEEEE--ECCEEEEEEEeCCEEEEEEEec
Confidence 56665544 35667776542110 11 11 1111123455555 4566788888888655 4554
No 279
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.80 E-value=0.0061 Score=57.93 Aligned_cols=134 Identities=10% Similarity=0.073 Sum_probs=79.0
Q ss_pred ceEEEEEeeeccc---cccCCCcceEEeeCCCCC-EEEEEECCC----cEEEEEcCCCCCCCCeeeeccCCCCeEEEEEe
Q psy4571 87 ISILFFEIIFTQN---FPFPLSRQDVAWHLLHES-LFGSVADDQ----KLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFN 158 (437)
Q Consensus 87 ~~i~~~~~~~~~~---~~~~~~v~~~~~sp~~~~-~l~~~~~dg----~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~ 158 (437)
+.|..+|...... .........++|++ +++ ++++...++ .+.+.+... .......+.. ......++++
T Consensus 159 ~~I~~id~~~~~v~~~~~~~~~P~~ia~d~-~G~~lyvad~~~~~~~~~v~~~~~~g--~~~~~~~l~~-~~~p~giavd 234 (430)
T 3tc9_A 159 HPTRLIDFEKEYVSTVYSGLSKVRTICWTH-EADSMIITNDQNNNDRPNNYILTRES--GFKVITELTK-GQNCNGAETH 234 (430)
T ss_dssp EEEEEEETTTTEEEEEECCCSCEEEEEECT-TSSEEEEEECCSCTTSEEEEEEEGGG--TSCSEEEEEE-CSSCCCEEEC
T ss_pred CcEEEEECCCCEEEEEecCCCCcceEEEeC-CCCEEEEEeCCCCcccceEEEEeCCC--ceeeeeeecc-CCCceEEEEe
Confidence 5666666432211 11234577899999 566 554443322 233344331 1121122222 2345678899
Q ss_pred CCCCcEEEEEeCCCeEEEEeCCCCce-eeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCC
Q psy4571 159 PYSEYILATGSADKTVALWDLRNLKL-KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 225 (437)
Q Consensus 159 ~~~~~~l~sgs~dg~i~lwd~~~~~~-~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~ 225 (437)
|++.+++++-..++.|..++...... .+.... .......++|+|++++++++-...+.|..++...
T Consensus 235 p~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~-~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 235 PINGELYFNSWNAGQVFRYDFTTQETTPLFTIQ-DSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDW 301 (430)
T ss_dssp TTTCCEEEEETTTTEEEEEETTTTEEEEEEECS-SSSCCEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred CCCCEEEEEECCCCEEEEEECCCCcEEEEEEcC-CCCcceeEEEcCCCCEEEEEECCCCEEEEEeCCc
Confidence 95444666766789999999987443 111221 1234678999999987677777788999988764
No 280
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.77 E-value=0.0015 Score=65.90 Aligned_cols=256 Identities=8% Similarity=-0.046 Sum_probs=129.1
Q ss_pred EEEeeCC-CcceEEEeeccC-----------ceEeeecCCCceeE--------------EEecCCCCeEEEec--CceEE
Q psy4571 39 RLCVAEP-FDDAVEERVINE-----------EYKIWKKNTPFLYD--------------LVVNNYVANISCIL--NISIL 90 (437)
Q Consensus 39 ~~~~~~~-~~~~l~tgs~d~-----------~v~iw~~~~~~~~~--------------~~~~~~~~~i~~~~--~~~i~ 90 (437)
+.++. + ++++++.|+.+. .+.+||..++.... ......+..+...+ +..+.
T Consensus 190 ~~av~-~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~ 268 (656)
T 1k3i_A 190 AAAIE-PTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTS 268 (656)
T ss_dssp EEEEE-TTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEE
T ss_pred eEEEE-ecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceE
Confidence 56666 5 888999987653 46788865533221 12222222223332 23678
Q ss_pred EEEeeec-----cccccCCCcceEEeeCCCCCEEEEEE-CC-----CcEEEEEcCCCCCCCCe-----eeeccCCCCeEE
Q psy4571 91 FFEIIFT-----QNFPFPLSRQDVAWHLLHESLFGSVA-DD-----QKLMIWDTRSHNVSKPS-----HTVDAHTAEVNC 154 (437)
Q Consensus 91 ~~~~~~~-----~~~~~~~~v~~~~~sp~~~~~l~~~~-~d-----g~v~vwd~~~~~~~~~~-----~~~~~h~~~v~~ 154 (437)
+||.... ..++.++.-.+++..+ ++.+++.|+ .+ ..+.+||+.+.. ...+ ..+..... .
T Consensus 269 ~yd~~t~~W~~~~~~~~~R~~~s~~~~~-dg~iyv~GG~~~~~~~~~~~e~yd~~t~~-W~~~~~~~~~p~~~~~~---~ 343 (656)
T 1k3i_A 269 LYDSSSDSWIPGPDMQVARGYQSSATMS-DGRVFTIGGSWSGGVFEKNGEVYSPSSKT-WTSLPNAKVNPMLTADK---Q 343 (656)
T ss_dssp EEEGGGTEEEECCCCSSCCSSCEEEECT-TSCEEEECCCCCSSSCCCCEEEEETTTTE-EEEETTSCSGGGCCCCT---T
T ss_pred EecCcCCceeECCCCCccccccceEEec-CCeEEEEeCcccCCcccccceEeCCCCCc-ceeCCCccccccccccc---c
Confidence 8875432 2233344445566666 678888888 34 568999997431 1111 00000000 0
Q ss_pred EEEeCCCCcEEEEEeCC---------CeEEEEeCCCCceeeeEeccCC---------CceEEEEEcCCCCcEEEEEeCCC
Q psy4571 155 LSFNPYSEYILATGSAD---------KTVALWDLRNLKLKLHSFESHK---------DEIFQVQWSPHNETILASSGTDR 216 (437)
Q Consensus 155 l~~~~~~~~~l~sgs~d---------g~i~lwd~~~~~~~~~~~~~h~---------~~v~~v~~~p~~~~~l~sg~~dg 216 (437)
..+..++. +++.|+.+ ..+..||..+... ......+. ..-.++.|...+..+++.|+.++
T Consensus 344 ~~~~~~~~-iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w-~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~ 421 (656)
T 1k3i_A 344 GLYRSDNH-AWLFGWKKGSVFQAGPSTAMNWYYTSGSGD-VKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPD 421 (656)
T ss_dssp GGGTTTCS-CCEEECGGGCEEECCSSSEEEEEECSTTCE-EEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSS
T ss_pred ceeecCCc-eEEEECCCCcEEEecCccceeeeecCCcce-eecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCC
Confidence 11122333 34555444 4567888887553 22211111 12244555443444788887543
Q ss_pred -----------eEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCC-----------Ce
Q psy4571 217 -----------RLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED-----------NI 274 (437)
Q Consensus 217 -----------~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~d-----------g~ 274 (437)
.|.+||..+..-..... . .+.. ...-.+....|+++ +++.|+.+ ..
T Consensus 422 ~~~~~~~~~~~~v~~yd~~~~~W~~~~~--~--------~mp~-~R~~~~~~~l~~g~-i~v~GG~~~~~~~~~~~~~~~ 489 (656)
T 1k3i_A 422 YQDSDATTNAHIITLGEPGTSPNTVFAS--N--------GLYF-ARTFHTSVVLPDGS-TFITGGQRRGIPFEDSTPVFT 489 (656)
T ss_dssp SSSSBCCCCEEEEECCSTTSCCEEEECT--T--------CCSS-CCBSCEEEECTTSC-EEEECCBSBCCTTCCCSBCCC
T ss_pred CCCCCcCCcceEEEcCCCCCCCeeEEcc--C--------CCCC-CcccCCeEECCCCC-EEEECCcccCcCcCCCCcccc
Confidence 57777776543211100 0 0000 11112345668888 78788754 56
Q ss_pred EEEEeCCCCCCceeeeeeecccCCce-eeeecCCCCcccccCC
Q psy4571 275 MQEYCDSTDSDTKTMRLDSIRSNGGI-SSTASPTASSTASESP 316 (437)
Q Consensus 275 i~iwd~~~~~~~~~~~~~~~~~~~~~-~~~~s~~g~~l~s~s~ 316 (437)
+.+||..+.+-.. +.. ........ .+.+.|+|++++.|+.
T Consensus 490 v~~ydp~t~~W~~-~~~-~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 490 PEIYVPEQDTFYK-QNP-NSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp CEEEEGGGTEEEE-CCC-CSSCCCTTEEEEECTTSCEEEEECC
T ss_pred eEEEcCCCCceee-cCC-CCCccccccHhhcCCCcEEEecCCC
Confidence 8999987753221 111 11111222 3355789999999884
No 281
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.75 E-value=0.0056 Score=61.08 Aligned_cols=162 Identities=9% Similarity=0.021 Sum_probs=104.5
Q ss_pred CcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCce
Q psy4571 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKL 184 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~ 184 (437)
.+..++|++.++.++.+=...+.|..+++.... .....+...-.....+++.+.+..++.+-...+.|.+.+++....
T Consensus 41 ~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~--~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~ 118 (619)
T 3s94_A 41 DAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTE--SVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLR 118 (619)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEEC-------CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred ceEEEEEEeCCCEEEEEECCCCeEEEEEccCCC--ceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCE
Confidence 467899999655566555556788888887321 112233333356899999998777666777789999999986432
Q ss_pred eeeEeccCCCceEEEEEcCCCCcEEEEEe-CCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCC
Q psy4571 185 KLHSFESHKDEIFQVQWSPHNETILASSG-TDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEP 263 (437)
Q Consensus 185 ~~~~~~~h~~~v~~v~~~p~~~~~l~sg~-~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~ 263 (437)
.......-.....|++.|.+.+++.+-- ..+.|...++...... .+ ....-.....|++.++++
T Consensus 119 -~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~------------~l--~~~~~~~P~Glald~~~~ 183 (619)
T 3s94_A 119 -KVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRF------------II--INSEIYWPNGLTLDYEEQ 183 (619)
T ss_dssp -EEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCE------------EE--ECSSCSSEEEEEEETTTT
T ss_pred -EEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceE------------EE--EeCCCCCCcEEEEEccCC
Confidence 2222233345678999998666666642 2467777776643211 11 112234678999999877
Q ss_pred eEEEEEeCCCeEEEEeCCCC
Q psy4571 264 WVICSVSEDNIMQEYCDSTD 283 (437)
Q Consensus 264 ~~l~s~~~dg~i~iwd~~~~ 283 (437)
.+.++-...+.|...|+...
T Consensus 184 ~LY~aD~~~~~I~~~~~dG~ 203 (619)
T 3s94_A 184 KLYWADAKLNFIHKSNLDGT 203 (619)
T ss_dssp EEEEEETTTCCEEEESSSCC
T ss_pred EEEEEeCCCCeEEEecCCCC
Confidence 67777777889999998754
No 282
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.74 E-value=0.0039 Score=57.24 Aligned_cols=192 Identities=10% Similarity=0.080 Sum_probs=107.1
Q ss_pred CcceEEeeCCCCCEEEEE------------ECCCcEEEEEcCCCCC-CCCeeeecc-----CCCCeEEEEEeC--CCC-c
Q psy4571 105 SRQDVAWHLLHESLFGSV------------ADDQKLMIWDTRSHNV-SKPSHTVDA-----HTAEVNCLSFNP--YSE-Y 163 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~------------~~dg~v~vwd~~~~~~-~~~~~~~~~-----h~~~v~~l~~~~--~~~-~ 163 (437)
...+++..| ++..++++ ..+|.|.++|+++... .+.+ .+.+ .......+.+.+ ++. +
T Consensus 51 G~EDi~~~~-~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l-~~~g~~~~~~~f~PhGi~~~~d~dg~~~ 128 (355)
T 3sre_A 51 GSEDLEILP-NGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSEL-EIIGNTLDISSFNPHGISTFIDDDNTVY 128 (355)
T ss_dssp CCCEEEECT-TSEEEEEECCC-----------CCEEEEEETTSSSCCEEEC-EEECSSCCGGGCCEEEEEEEECTTCCEE
T ss_pred CcceeEEcC-CCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEE-EccCCCCCcCceeeeeeEEEECCCCcEE
Confidence 566777777 44444333 2689999999874311 1122 2222 234677888766 344 4
Q ss_pred EEEEEeC--CCeEEEEeCCCCcee---eeEeccC-CCceEEEEEcCCCCcEEEEEeC-----------------CCeEEE
Q psy4571 164 ILATGSA--DKTVALWDLRNLKLK---LHSFESH-KDEIFQVQWSPHNETILASSGT-----------------DRRLHV 220 (437)
Q Consensus 164 ~l~sgs~--dg~i~lwd~~~~~~~---~~~~~~h-~~~v~~v~~~p~~~~~l~sg~~-----------------dg~i~v 220 (437)
++++-.. +.+|.+|+++..... +..+.+. -...+.+++.++|. ++++... .|.|.-
T Consensus 129 L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~-fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr 207 (355)
T 3sre_A 129 LLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEH-FYATNDHYFIDPYLKSWEMHLGLAWSFVTY 207 (355)
T ss_dssp EEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTE-EEEEESCSCSSHHHHHHHHHTTCCCEEEEE
T ss_pred EEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCC-EEecCCcEeCCcccccchhhccCCccEEEE
Confidence 4555444 567888877653321 2223221 23578999999997 4666531 133444
Q ss_pred EEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCce
Q psy4571 221 WDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGI 300 (437)
Q Consensus 221 wd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 300 (437)
+|. ++. + .....-...+.++|+||++.+.++-+..+.|..|++.....+....... ....+-
T Consensus 208 ~d~--~~~------------~---~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~-~~g~PD 269 (355)
T 3sre_A 208 YSP--NDV------------R---VVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLS-FDTLVD 269 (355)
T ss_dssp ECT--TCC------------E---EEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEE-CSSEEE
T ss_pred EEC--CeE------------E---EeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEe-CCCCCc
Confidence 443 110 1 1112223568999999999777777888999999987432222211111 122333
Q ss_pred eeeecC-CCCcccccCCC
Q psy4571 301 SSTASP-TASSTASESPT 317 (437)
Q Consensus 301 ~~~~s~-~g~~l~s~s~d 317 (437)
.+++.+ +|.+++++..+
T Consensus 270 Gi~vD~e~G~lwva~~~~ 287 (355)
T 3sre_A 270 NISVDPVTGDLWVGCHPN 287 (355)
T ss_dssp EEEECTTTCCEEEEEESC
T ss_pred eEEEeCCCCcEEEEecCC
Confidence 456777 58877755433
No 283
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.73 E-value=0.0034 Score=59.76 Aligned_cols=158 Identities=8% Similarity=0.044 Sum_probs=94.3
Q ss_pred CcceEEeeCC-CCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCC---Ce-EEEEeC
Q psy4571 105 SRQDVAWHLL-HESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSAD---KT-VALWDL 179 (437)
Q Consensus 105 ~v~~~~~sp~-~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~d---g~-i~lwd~ 179 (437)
....++|+|+ ++..|..+...+.|+.+|+.+ ..+..+.........++++++|. ++++.... .. +...+.
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~----g~v~~~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~ 214 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVN----QYVDIKTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTR 214 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTT----TEEEEECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECG
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCC----CEEEEeecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEEC
Confidence 4678999984 234444454448899999863 22333434455689999999998 56665422 12 333332
Q ss_pred CCCceeeeEeccCCCceEEEEEcC-CCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEE
Q psy4571 180 RNLKLKLHSFESHKDEIFQVQWSP-HNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 258 (437)
Q Consensus 180 ~~~~~~~~~~~~h~~~v~~v~~~p-~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~ 258 (437)
.........+. .......++++| ++. ++++-..++.|+.+|..++..... +... +....-..++|
T Consensus 215 ~~~~~~~~~~~-~~~~P~giavd~~~G~-lyv~d~~~~~V~~~d~~~g~~~~~-----------~~~~-~~~~~~~~ia~ 280 (433)
T 4hw6_A 215 ASGFTERLSLC-NARGAKTCAVHPQNGK-IYYTRYHHAMISSYDPATGTLTEE-----------EVMM-DTKGSNFHIVW 280 (433)
T ss_dssp GGTTCCEEEEE-ECSSBCCCEECTTTCC-EEECBTTCSEEEEECTTTCCEEEE-----------EEEC-SCCSSCEEEEE
T ss_pred CCCeecccccc-ccCCCCEEEEeCCCCe-EEEEECCCCEEEEEECCCCeEEEE-----------Eecc-CCCCCcccEEE
Confidence 22111011121 223456788999 554 666666778899999875432111 1111 11122346999
Q ss_pred ccCCCeEEEEEeCCCeEEEEeCC
Q psy4571 259 NPNEPWVICSVSEDNIMQEYCDS 281 (437)
Q Consensus 259 ~p~~~~~l~s~~~dg~i~iwd~~ 281 (437)
+|+++++.++-...+.|+.++..
T Consensus 281 dpdG~~LYvad~~~~~I~~~~~d 303 (433)
T 4hw6_A 281 HPTGDWAYIIYNGKHCIYRVDYN 303 (433)
T ss_dssp CTTSSEEEEEETTTTEEEEEEBC
T ss_pred eCCCCEEEEEeCCCCEEEEEeCC
Confidence 99998777777788999998876
No 284
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.73 E-value=0.0015 Score=62.11 Aligned_cols=159 Identities=10% Similarity=0.100 Sum_probs=98.4
Q ss_pred CcceEEeeC-CCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCC----eEEEEeC
Q psy4571 105 SRQDVAWHL-LHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADK----TVALWDL 179 (437)
Q Consensus 105 ~v~~~~~sp-~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg----~i~lwd~ 179 (437)
....++++| .++.++ ++...+.|+.+|+.. ..+..+.........++|++++..++++...++ .+...+.
T Consensus 138 ~P~~lavdp~~~g~Ly-v~d~~~~I~~id~~~----~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~ 212 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLY-LVGEQHPTRLIDFEK----EYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR 212 (430)
T ss_dssp CCCEEEEETTEEEEEE-EEEBTEEEEEEETTT----TEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG
T ss_pred CCCEEEECCCCCCeEE-EEeCCCcEEEEECCC----CEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC
Confidence 567899998 345444 444448899999873 223333334556889999999996455544322 3444443
Q ss_pred CCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEc
Q psy4571 180 RNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWN 259 (437)
Q Consensus 180 ~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~ 259 (437)
.........+.. ......++++|++.+++++-..++.|..++....... .+..... ......|+|+
T Consensus 213 ~g~~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~------------~~~~~~~-~~~P~gia~~ 278 (430)
T 3tc9_A 213 ESGFKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETT------------PLFTIQD-SGWEFHIQFH 278 (430)
T ss_dssp GGTSCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEE------------EEEECSS-SSCCEEEEEC
T ss_pred CCceeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEE------------EEEEcCC-CCcceeEEEc
Confidence 321111122222 2345678899944446777767889999998754210 1111211 2346789999
Q ss_pred cCCCeEEEEEeCCCeEEEEeCCC
Q psy4571 260 PNEPWVICSVSEDNIMQEYCDST 282 (437)
Q Consensus 260 p~~~~~l~s~~~dg~i~iwd~~~ 282 (437)
|+|++++++-..++.|..++...
T Consensus 279 pdG~~lyv~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 279 PSGNYAYIVVVNQHYILRSDYDW 301 (430)
T ss_dssp TTSSEEEEEETTTTEEEEEEEET
T ss_pred CCCCEEEEEECCCCEEEEEeCCc
Confidence 99997777777889999988764
No 285
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.71 E-value=0.012 Score=58.23 Aligned_cols=62 Identities=5% Similarity=-0.096 Sum_probs=43.2
Q ss_pred CCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCC
Q psy4571 272 DNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGT 348 (437)
Q Consensus 272 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h 348 (437)
+|.|..||+.+++......... ..........+.+++.++.|+. ++.+|..+|+++-++...
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~~----~~~~g~~~tagglvf~g~~dg~-----------l~A~D~~tG~~lW~~~~~ 526 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEHL----PLWAGVLATAGNLVFTGTGDGY-----------FKAFDAKSGKELWKFQTG 526 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESS----CCCSCCEEETTTEEEEECTTSE-----------EEEEETTTCCEEEEEECS
T ss_pred cceEEEEECCCCCEEEEecCCC----CCcccceEeCCCEEEEECCCCc-----------EEEEECCCCCEEEEecCC
Confidence 6889999999998776665422 1111222334667777888887 899999999988766443
No 286
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.71 E-value=0.05 Score=54.26 Aligned_cols=163 Identities=5% Similarity=0.050 Sum_probs=106.1
Q ss_pred CcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEE-eCCCeEEEEeCCCCc
Q psy4571 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATG-SADKTVALWDLRNLK 183 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sg-s~dg~i~lwd~~~~~ 183 (437)
....+++.+.+++++.+-...+.|.+.+++.. .........-.....|++.|...+++.+- +..+.|...+++...
T Consensus 81 ~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~---~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~ 157 (628)
T 4a0p_A 81 YPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQ---HRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSE 157 (628)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTST---TCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS
T ss_pred CcceEEEEeCCCEEEEEECCCCEEEEEecCCC---cEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCc
Confidence 45688888766777777667788999998732 11112223345678999999766544443 225678888887533
Q ss_pred eeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCC
Q psy4571 184 LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEP 263 (437)
Q Consensus 184 ~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~ 263 (437)
. ..+...-.....++++++++.++++-...+.|...|+..... +.+. ..-....+|++.. .
T Consensus 158 ~--~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~------------~v~~---~~l~~P~glav~~--~ 218 (628)
T 4a0p_A 158 R--TTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR------------EVIA---DDLPHPFGLTQYQ--D 218 (628)
T ss_dssp C--EEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC------------EEEE---ECCSCEEEEEEET--T
T ss_pred e--EEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce------------EEee---ccCCCceEEEEEC--C
Confidence 2 222233456789999998777677767788999999976422 1111 1222345677754 3
Q ss_pred eEEEEEeCCCeEEEEeCCCCCCceee
Q psy4571 264 WVICSVSEDNIMQEYCDSTDSDTKTM 289 (437)
Q Consensus 264 ~~l~s~~~dg~i~iwd~~~~~~~~~~ 289 (437)
+++++-...+.|...|..+++....+
T Consensus 219 ~ly~tD~~~~~I~~~dk~tg~~~~~l 244 (628)
T 4a0p_A 219 YIYWTDWSRRSIERANKTSGQNRTII 244 (628)
T ss_dssp EEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred EEEEecCCCCEEEEEECCCCCceEEE
Confidence 47777777899999998777655444
No 287
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.66 E-value=0.014 Score=55.42 Aligned_cols=207 Identities=8% Similarity=0.035 Sum_probs=106.8
Q ss_pred eeEEEecCC--CCeE-EEecCceEEEEEeeecccc---ccCCCcceEEeeCCCCCEEEEEECC---C-cEEEEEcCCCCC
Q psy4571 69 LYDLVVNNY--VANI-SCILNISILFFEIIFTQNF---PFPLSRQDVAWHLLHESLFGSVADD---Q-KLMIWDTRSHNV 138 (437)
Q Consensus 69 ~~~~~~~~~--~~~i-~~~~~~~i~~~~~~~~~~~---~~~~~v~~~~~sp~~~~~l~~~~~d---g-~v~vwd~~~~~~ 138 (437)
...+++.+. ...+ .+...+.|+.++...+... ........++|+++ ++++++-... . .+...+....
T Consensus 141 P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~~~~~P~giavd~d-G~lyVad~~~~~~~~gv~~~~~~~~-- 217 (433)
T 4hw6_A 141 IWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTTNIGQCADVNFTLN-GDMVVVDDQSSDTNTGIYLFTRASG-- 217 (433)
T ss_dssp CCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECCCCSCEEEEEECTT-CCEEEEECCSCTTSEEEEEECGGGT--
T ss_pred CceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeecCCCCccEEEECCC-CCEEEEcCCCCcccceEEEEECCCC--
Confidence 445555552 2333 2222256666665322211 12235789999994 5555544321 1 1333333211
Q ss_pred CCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEec-cCCCceEEEEEcCCCCcEEEEEeCCCe
Q psy4571 139 SKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFE-SHKDEIFQVQWSPHNETILASSGTDRR 217 (437)
Q Consensus 139 ~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~-~h~~~v~~v~~~p~~~~~l~sg~~dg~ 217 (437)
......+. .......++++|++.+++++-..++.|+.+|..++......+. +....-..++|+|++++++++-...+.
T Consensus 218 ~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~ 296 (433)
T 4hw6_A 218 FTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHC 296 (433)
T ss_dssp TCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTE
T ss_pred eecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCE
Confidence 11111221 2334567889994444566666778999999986543111111 112223579999999866777777889
Q ss_pred EEEEEcCCCCCCCC----CCCCCCCCCce-EEEecCccccEEEEEE---------ccCCCeEEEEEeCCCeEEEEeC
Q psy4571 218 LHVWDLSKIGEEQS----TEDAEDGPPEL-LFIHGGHTAKISDFSW---------NPNEPWVICSVSEDNIMQEYCD 280 (437)
Q Consensus 218 i~vwd~~~~~~~~~----~~~~~~~~~~~-~~~~~~h~~~v~~l~~---------~p~~~~~l~s~~~dg~i~iwd~ 280 (437)
|+.++......... ........... -......-.....+++ .++|. ++++-..++.|+.++.
T Consensus 297 I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~-lyvaD~~n~~I~~~~~ 372 (433)
T 4hw6_A 297 IYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYD-FYFCDRDSHTVRVLTP 372 (433)
T ss_dssp EEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEE-EEEEETTTTEEEEECT
T ss_pred EEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCc-EEEEECCCCEEEEECC
Confidence 99988763211100 00000000000 0000001124677898 66666 7777778889999985
No 288
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.66 E-value=0.0025 Score=57.36 Aligned_cols=160 Identities=11% Similarity=0.152 Sum_probs=100.4
Q ss_pred CcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeecc----CCC--CeEEEEE---eCCCCcEEEEEe------
Q psy4571 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDA----HTA--EVNCLSF---NPYSEYILATGS------ 169 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~----h~~--~v~~l~~---~~~~~~~l~sgs------ 169 (437)
-..+++|++.++.++++.-..|+|..||...+. ...+ .+.+ ... .+..+.| .|+++ ++++..
T Consensus 14 yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~-~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~gr-L~vv~~~~~af~ 90 (334)
T 2p9w_A 14 TPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQS-HFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKR-LFAVMKNAKSFN 90 (334)
T ss_dssp CCSCEEEETTTTEEEEEETTTTEEEEECTTTCC-EEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCE-EEEEEEETTTTC
T ss_pred CCcCccCcCCCCEEEEEeccCCEEEEEcCCCCe-EEEE-ecCCccccCCCcceeeEEEEeccCCCCc-EEEEEccccccc
Confidence 456899998555555555478999999987321 1112 2221 111 3689999 68866 566544
Q ss_pred -------CCCeEEEEeCC---CCceeeeEec--cC-----------CCceEEEEEcCCCCcEEEEEeCC-CeEEEEEcCC
Q psy4571 170 -------ADKTVALWDLR---NLKLKLHSFE--SH-----------KDEIFQVQWSPHNETILASSGTD-RRLHVWDLSK 225 (437)
Q Consensus 170 -------~dg~i~lwd~~---~~~~~~~~~~--~h-----------~~~v~~v~~~p~~~~~l~sg~~d-g~i~vwd~~~ 225 (437)
.+..|..+|+. +++. +.... .. ......++..++|+ ..++++.. +.|...+...
T Consensus 91 ~~g~~~~g~~~v~~~Dl~~~~tg~~-~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~Gn-aYVt~s~~~~~I~rV~pdG 168 (334)
T 2p9w_A 91 FADQSSHGASSFHSFNLPLSENSKP-VWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGN-SYVAFALGMPAIARVSADG 168 (334)
T ss_dssp TTSCCSSSCCEEEEEESSCCTTCCC-SEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSC-EEEEEEESSCEEEEECTTS
T ss_pred ccccccCCCCEEEEEcCCcCCCCCE-EEEecCccccccccccccccccCCceeEECCCCC-EEEeCCCCCCeEEEEeCCC
Confidence 26789999999 6554 32221 11 12478999999998 58888877 7776666654
Q ss_pred CCCCCCCCCCCCCCCceEEE-e--cCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCC
Q psy4571 226 IGEEQSTEDAEDGPPELLFI-H--GGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDST 282 (437)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~-~--~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~ 282 (437)
... .. ... . .......+.|+++|+|..+++..+ +|.+..+|+.+
T Consensus 169 ~~~-~~-----------~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~-~g~L~~fD~~~ 215 (334)
T 2p9w_A 169 KTV-ST-----------FAWESGNGGQRPGYSGITFDPHSNKLIAFGG-PRALTAFDVSK 215 (334)
T ss_dssp CCE-EE-----------EEECCCCSSSCCSCSEEEEETTTTEEEEESS-SSSEEEEECSS
T ss_pred CEE-ee-----------eeecCCCcccccCcceEEEeCCCCEEEEEcC-CCeEEEEcCCC
Confidence 311 00 000 0 111223578999999995555545 99999999984
No 289
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.64 E-value=0.028 Score=50.23 Aligned_cols=206 Identities=14% Similarity=0.179 Sum_probs=131.9
Q ss_pred EEecCCCCeEEEecCceEEEEEeeeccccc---cCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccC
Q psy4571 72 LVVNNYVANISCILNISILFFEIIFTQNFP---FPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAH 148 (437)
Q Consensus 72 ~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~---~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h 148 (437)
..++|....++.-....+.+|++...+++. ++..|.--.|- +.+.|+..+ +..|+-|+++. ...+.+.+..|
T Consensus 72 AIMnP~~~ViALrag~~LQiFnletK~klks~~~~e~VvfWkWi--s~~~L~lVT-~taVyHWs~~~--~s~P~kvFdR~ 146 (365)
T 2xzh_A 72 AIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWI--SLNTVALVT-DNAVYHWSMEG--ESQPVKMFDRH 146 (365)
T ss_dssp EEECSSSSEEEEEETTEEEEEETTTTEEEEEEECSSCEEEEEEC--SSSEEEEEE-SSEEEEEESST--TCCCEEEEECC
T ss_pred eeeCCCccEEEEecCCeEEEechHHhhhhcceecCCccEEEEec--CCCeEEEEc-CCcEEEEcccC--CCCCceeeecc
Confidence 345666655555566789999987665543 46666666665 356666666 55799999975 34666666655
Q ss_pred C----CCeEEEEEeCCCCcEEEEEe------CCCeEEEEeCCCCceeeeEeccCCCceEEEEEcC--CCCcEEEEEeC--
Q psy4571 149 T----AEVNCLSFNPYSEYILATGS------ADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSP--HNETILASSGT-- 214 (437)
Q Consensus 149 ~----~~v~~l~~~~~~~~~l~sgs------~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p--~~~~~l~sg~~-- 214 (437)
. ..|..-..+++.++++++|- -.|.+.||..+... -+.+++|.+.-..+.+.. ....+++-+..
T Consensus 147 ~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~--sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~ 224 (365)
T 2xzh_A 147 SSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV--SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQ 224 (365)
T ss_dssp GGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTE--EEEECCSEEEEEEECCTTCSSCEEEEEEEEEET
T ss_pred hhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccc--cceeeeeeeeeEEEecCCCCCCceEEEEEEecC
Confidence 3 46777888899998777775 25789999998632 567778766544443321 11224444433
Q ss_pred -CCeEEEEEcCCCC-CCCCCCCCCCCCCceEE---EecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceee
Q psy4571 215 -DRRLHVWDLSKIG-EEQSTEDAEDGPPELLF---IHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTM 289 (437)
Q Consensus 215 -dg~i~vwd~~~~~-~~~~~~~~~~~~~~~~~---~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 289 (437)
.++++|-++.... .... -+.+.+- ..+...+...++..++... ++..-..-|.+++||++++.++..-
T Consensus 225 ~g~kLhIiEi~~~~~~~~~------f~kk~vdi~fppea~~DFPVamqvs~kyg-viyviTK~G~ihlyDleTgt~i~~n 297 (365)
T 2xzh_A 225 AGGKLHIIEVGTPPTGNQP------FPKKAVDVFFPPEAQNDFPVAMQISEKHD-VVFLITKYGYIHLYDLETGTCIYMN 297 (365)
T ss_dssp TEEEEEEEECSSCCTTCCC------CCCEEEEECCCTTCTTCCEEEEEEETTTT-EEEEEETTSEEEEEETTTCCEEEEE
T ss_pred CCcEEEEEEcCCCCCCCCC------cccccceeeCCccccCCceEEEEecccCC-EEEEEeCCcEEEEEEcccCcEEEEe
Confidence 2589999985431 1100 0011111 1223355667788888877 7778889999999999999887655
Q ss_pred ee
Q psy4571 290 RL 291 (437)
Q Consensus 290 ~~ 291 (437)
+.
T Consensus 298 rI 299 (365)
T 2xzh_A 298 RI 299 (365)
T ss_dssp EC
T ss_pred cc
Confidence 53
No 290
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.61 E-value=0.0058 Score=62.63 Aligned_cols=161 Identities=11% Similarity=0.054 Sum_probs=89.9
Q ss_pred CcceEEee-CCCCCEEEE-EECCC----cEEEEEcCCC-CCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCC----Ce
Q psy4571 105 SRQDVAWH-LLHESLFGS-VADDQ----KLMIWDTRSH-NVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSAD----KT 173 (437)
Q Consensus 105 ~v~~~~~s-p~~~~~l~~-~~~dg----~v~vwd~~~~-~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~d----g~ 173 (437)
.+...+|| | ++++||- ...+| .|+++|+.++ +... ..+.. ....++|+|||+.++++...+ ..
T Consensus 175 ~~~~~~~S~P-DG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~--~~~~~---~~~~~~WspDg~~l~y~~~d~~~~~~~ 248 (751)
T 2xe4_A 175 DVMEVKPAPP-EHDLVAFSVDMSGNEVYTIEFKRISDPSQTIA--DKVSG---TNGEIVWGPDHTSLFYVTKDETLRENK 248 (751)
T ss_dssp EEEEEEECTT-TTCEEEEEEESSSSSCEEEEEEETTCTTCCCC--CCEEE---ECSCCEECSSTTEEEEEEECTTCCEEE
T ss_pred EEeeeEecCC-CCCEEEEEEeCCCCceEEEEEEECCCCCEeCC--ccccC---ceeeEEEecCCCEEEEEEECCCCCCCE
Confidence 46688999 9 5665554 34343 4999999854 3111 11111 134688999998755554322 36
Q ss_pred EEEEeCCCCcee-eeEec-cCCCceEEEEEcCCCCcEEEEEeC--CCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCc
Q psy4571 174 VALWDLRNLKLK-LHSFE-SHKDEIFQVQWSPHNETILASSGT--DRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGH 249 (437)
Q Consensus 174 i~lwd~~~~~~~-~~~~~-~h~~~v~~v~~~p~~~~~l~sg~~--dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h 249 (437)
|..+++.++... ...+. ........+.|+|+|++++++... ...|.++|+.++..... ........
T Consensus 249 v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~----------~~~l~~~~ 318 (751)
T 2xe4_A 249 VWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNT----------LEIVRPRE 318 (751)
T ss_dssp EEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCC----------EEESSCCC
T ss_pred EEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCce----------eEEeecCC
Confidence 888888875421 22222 223446788999999976655543 33588888876421110 00111223
Q ss_pred cccEEEEEEccCCCeEEEEEeCC----CeEEEEeCCC
Q psy4571 250 TAKISDFSWNPNEPWVICSVSED----NIMQEYCDST 282 (437)
Q Consensus 250 ~~~v~~l~~~p~~~~~l~s~~~d----g~i~iwd~~~ 282 (437)
.....++.|+. |..+++....+ ..|..+|+.+
T Consensus 319 ~~~~~s~~~~~-g~~l~~~t~~~~a~~~~L~~~d~~~ 354 (751)
T 2xe4_A 319 KGVRYDVQMHG-TSHLVILTNEGGAVNHKLLIAPRGQ 354 (751)
T ss_dssp TTCCEEEEEET-TTEEEEEECTTTCTTCEEEEEETTS
T ss_pred CCceEEEeeee-CCEEEEEeCCCCCCCcEEEEEcCCC
Confidence 33445555544 55455555443 4677777765
No 291
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.57 E-value=0.019 Score=57.14 Aligned_cols=162 Identities=8% Similarity=0.015 Sum_probs=101.7
Q ss_pred CcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeee-ccCCCCeEEEEEeCCCCcEEEEEe-CCCeEEEEeCCCC
Q psy4571 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTV-DAHTAEVNCLSFNPYSEYILATGS-ADKTVALWDLRNL 182 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~-~~h~~~v~~l~~~~~~~~~l~sgs-~dg~i~lwd~~~~ 182 (437)
....+++.+.+++++.+-...+.|.+.+++. .....+ ...-.....|++.|.+.+++.+-. ..+.|...+++..
T Consensus 85 ~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG----~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~ 160 (619)
T 3s94_A 85 SPDGLACDWLGEKLYWTDSETNRIEVSNLDG----SLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGS 160 (619)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTS----CSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSC
T ss_pred CcCeEEEEecCCEEEEEeCCCCEEEEEECCC----CCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCC
Confidence 5678999986677777777788999999873 222222 233445778999998776455542 2467777777653
Q ss_pred ceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCC
Q psy4571 183 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNE 262 (437)
Q Consensus 183 ~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~ 262 (437)
.. .......-...+.+++++++..++++-...+.|...|+........ +.....| ..+|++..+
T Consensus 161 ~~-~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~-----------~~~~~~~---P~gi~~~~~- 224 (619)
T 3s94_A 161 SR-FIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAV-----------VKGSLPH---PFALTLFED- 224 (619)
T ss_dssp SC-EEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC-----------------------CCCEEESSS-
T ss_pred ce-EEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEE-----------EeCCCCC---ceEEEEeCC-
Confidence 32 2222223345789999998776677766778899998876332111 0001122 235666544
Q ss_pred CeEEEEEeCCCeEEEEeCCCCCCce
Q psy4571 263 PWVICSVSEDNIMQEYCDSTDSDTK 287 (437)
Q Consensus 263 ~~~l~s~~~dg~i~iwd~~~~~~~~ 287 (437)
+++++-..++.|...|..+++...
T Consensus 225 -~ly~td~~~~~V~~~d~~tg~~~~ 248 (619)
T 3s94_A 225 -ILYWTDWSTHSILACNKYTGEGLR 248 (619)
T ss_dssp -EEEEECTTTCSEEEEESSSCCCCE
T ss_pred -EEEEecCCCCEEEEEECCCCcccE
Confidence 467677778889999988776543
No 292
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.54 E-value=0.036 Score=53.13 Aligned_cols=118 Identities=14% Similarity=0.088 Sum_probs=71.7
Q ss_pred CcceEEe-------eCCCCCEEEEEECCC-c------EEEEEcCCCCCCC--C-eeeeccCCCCeEEEEEeCCCCcEEEE
Q psy4571 105 SRQDVAW-------HLLHESLFGSVADDQ-K------LMIWDTRSHNVSK--P-SHTVDAHTAEVNCLSFNPYSEYILAT 167 (437)
Q Consensus 105 ~v~~~~~-------sp~~~~~l~~~~~dg-~------v~vwd~~~~~~~~--~-~~~~~~h~~~v~~l~~~~~~~~~l~s 167 (437)
....++| +++ +..|+++...+ . |.+.+........ . ...+... .....++.+|++.+++++
T Consensus 187 ~p~~ia~~~~~~~~d~~-G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvt 264 (496)
T 3kya_A 187 RIRSIAFNKKIEGYADE-AEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFN 264 (496)
T ss_dssp BEEEEEECCCBTTTBCT-TCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEE
T ss_pred CCcEEEEeecccccCCC-CCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEE
Confidence 4788999 994 55444444433 2 6666644311111 0 0122211 234578889977777778
Q ss_pred EeCCCeEEEEeCC-------CCce-------------eeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCC
Q psy4571 168 GSADKTVALWDLR-------NLKL-------------KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 225 (437)
Q Consensus 168 gs~dg~i~lwd~~-------~~~~-------------~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~ 225 (437)
-..++.|..+|+. ++.. .+... +.....+.++|+|+|+.++++-.....|+.++...
T Consensus 265 d~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~-~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg 341 (496)
T 3kya_A 265 SYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTI-ADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDE 341 (496)
T ss_dssp ETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEEC-SSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred ECCCCEEEEEecccccccccCceeecccccccccccceeEec-CCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCC
Confidence 8888999999987 4332 11111 12344689999999986566666778899976643
No 293
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.50 E-value=0.0004 Score=70.46 Aligned_cols=166 Identities=8% Similarity=0.047 Sum_probs=100.3
Q ss_pred CcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeee-ccCCCCeEEEEEeCCCCcEEEEEeCC-CeEEEEeCCCC
Q psy4571 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTV-DAHTAEVNCLSFNPYSEYILATGSAD-KTVALWDLRNL 182 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~-~~h~~~v~~l~~~~~~~~~l~sgs~d-g~i~lwd~~~~ 182 (437)
....+++.+.++.++++-...+.|.+.++.. .....+ .........|+++|.+.+++++-... +.|...++...
T Consensus 454 ~P~glavD~~~g~LY~tD~~~~~I~v~d~dg----~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~ 529 (699)
T 1n7d_A 454 APDGLAVDWIHSNIYWTDSVLGTVSVADTKG----VKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV 529 (699)
T ss_dssp -CCCEECCCSSSBCEECCTTTSCEEEEBSSS----CCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSC
T ss_pred CcceEEEEeeCCcEEEEeccCCeEEEEecCC----CceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCC
Confidence 3567888865666776656678899999873 222222 22224567889999877645544333 67888777642
Q ss_pred ceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCC
Q psy4571 183 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNE 262 (437)
Q Consensus 183 ~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~ 262 (437)
.. .......-.....|+++|++..++++-...+.|.++++....... +......-.....|++..
T Consensus 530 ~~-~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~------------~~~~~~~~~~P~glavd~-- 594 (699)
T 1n7d_A 530 DI-YSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKT------------ILEDEKRLAHPFSLAVFE-- 594 (699)
T ss_dssp CC-CEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEE------------ECCCSSSCSSCCCCEEET--
T ss_pred Ce-eEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEE------------EEecCCcCCCceEeEEEC--
Confidence 22 111112223457899999877777777778899999986532111 111111111223445533
Q ss_pred CeEEEEEeCCCeEEEEeCCCCCCceee
Q psy4571 263 PWVICSVSEDNIMQEYCDSTDSDTKTM 289 (437)
Q Consensus 263 ~~~l~s~~~dg~i~iwd~~~~~~~~~~ 289 (437)
.+++++....+.|..+|..+++....+
T Consensus 595 ~~lywtd~~~~~V~~~d~~~G~~~~~i 621 (699)
T 1n7d_A 595 DKVFWTDIINEAIFSANRLTGSDVNLL 621 (699)
T ss_dssp TEEEEECSTTTCEEEEETTTEEEEECC
T ss_pred CEEEEEeCCCCeEEEEEccCCCceEEe
Confidence 347777777889999998877655544
No 294
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.37 E-value=0.092 Score=48.91 Aligned_cols=205 Identities=14% Similarity=0.199 Sum_probs=135.3
Q ss_pred EEecCCCCeEEEecCceEEEEEeeecccc---ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccC
Q psy4571 72 LVVNNYVANISCILNISILFFEIIFTQNF---PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAH 148 (437)
Q Consensus 72 ~~~~~~~~~i~~~~~~~i~~~~~~~~~~~---~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h 148 (437)
..++|....++--....+.+|++...+++ .++..|.--.|-. .+.|+..+ +..|+-|++.. ...+.+.+..|
T Consensus 71 AIMnP~~~iiALrag~~lQiFnle~K~klks~~~~e~VvfWkWis--~~~l~lVT-~taVyHWsi~~--~s~P~kvFdR~ 145 (494)
T 1bpo_A 71 AIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWIS--LNTVALVT-DNAVYHWSMEG--ESQPVKMFDRH 145 (494)
T ss_dssp EEECSSSSCEEEEETTEEEEEETTTTEEEEEEECSSCCCEEEEEE--TTEEEEEC-SSEEEEEESSS--SCCCEEEEECC
T ss_pred eeeCCCCcEEEEecCCeEEEEchHHhhhhcceecCCCceEEEecC--CCeEEEEc-CCeeEEecccC--CCCchhheecc
Confidence 34566666565556778999998765543 3567777777753 45666655 56799999975 34677777655
Q ss_pred C----CCeEEEEEeCCCCcEEEEEe------CCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCC--CCcEEEEEeCC-
Q psy4571 149 T----AEVNCLSFNPYSEYILATGS------ADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPH--NETILASSGTD- 215 (437)
Q Consensus 149 ~----~~v~~l~~~~~~~~~l~sgs------~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~--~~~~l~sg~~d- 215 (437)
. ..|..-..+++.++++++|- -.|.+.+|..+... -+.+.+|.+....+.+..+ ...+++-+...
T Consensus 146 ~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~--sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~ 223 (494)
T 1bpo_A 146 SSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV--SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQ 223 (494)
T ss_dssp GGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCC--EEEECCSEEEEEEEECTTCSSEEEEEEEEECST
T ss_pred hhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccc--cchheeeeeeeEEEecCCCCCCceEEEEEEecC
Confidence 3 46777888999998777775 35789999998633 5677888665554444321 12355555543
Q ss_pred --CeEEEEEcCCCC-CCCCCCCCCCCCCceE---EEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceee
Q psy4571 216 --RRLHVWDLSKIG-EEQSTEDAEDGPPELL---FIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTM 289 (437)
Q Consensus 216 --g~i~vwd~~~~~-~~~~~~~~~~~~~~~~---~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 289 (437)
++++|-++.... ..... +.+.+ +..+...+...++..++... ++..-..-|.+++||++++.++..-
T Consensus 224 ~g~kLhi~Ei~~~~~~~~~f------~kk~vdv~fppe~~~DFPvamqvs~kyg-viyviTK~G~i~lyDleTgt~i~~n 296 (494)
T 1bpo_A 224 AGGKLHIIEVGTPPTGNQPF------PKKAVDVFFPPEAQNDFPVAMQISEKHD-VVFLITKYGYIHLYDLETGTCIYMN 296 (494)
T ss_dssp TCCEEEEEECSCCCTTCCCC------CCEEEECCCCTTSTTCCEEEEEEETTTT-EEEEEETTSEEEEEETTTCCEEEEE
T ss_pred CCcEEEEEEcCCCccCCCCc------cceeeeeeCCcccccCceeEEEecccCC-EEEEEecCceEEEEecccceeeeee
Confidence 789999996531 10000 00111 11223355667888898888 7778889999999999999887655
Q ss_pred e
Q psy4571 290 R 290 (437)
Q Consensus 290 ~ 290 (437)
+
T Consensus 297 r 297 (494)
T 1bpo_A 297 R 297 (494)
T ss_dssp E
T ss_pred c
Confidence 5
No 295
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.35 E-value=0.063 Score=46.65 Aligned_cols=158 Identities=11% Similarity=0.116 Sum_probs=92.7
Q ss_pred cceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeec------cCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeC
Q psy4571 106 RQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVD------AHTAEVNCLSFNPYSEYILATGSADKTVALWDL 179 (437)
Q Consensus 106 v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~------~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~ 179 (437)
...+++.+ ++.++++.-.++.+.++++........+.... ......-.++|+|.+.. |.++.+.....+|.+
T Consensus 72 ~EGIa~~~-~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~-L~va~E~~p~~i~~~ 149 (255)
T 3qqz_A 72 LETIEYIG-DNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHT-FWFFKEKNPIEVYKV 149 (255)
T ss_dssp EEEEEECS-TTEEEEEETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTE-EEEEEESSSEEEEEE
T ss_pred hHHeEEeC-CCEEEEEECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCE-EEEEECcCCceEEEE
Confidence 44667766 45555555566788888876432111111111 22345789999999986 555555444445544
Q ss_pred CC--CceeeeEec-------cCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEec-Cc
Q psy4571 180 RN--LKLKLHSFE-------SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHG-GH 249 (437)
Q Consensus 180 ~~--~~~~~~~~~-------~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~-~h 249 (437)
+. ....+.... .+...+..++++|...++++.......+.++|.... .... ..+. +.
T Consensus 150 ~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~-~~~~------------~~L~~g~ 216 (255)
T 3qqz_A 150 NGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGE-VIGE------------MSLTKGS 216 (255)
T ss_dssp ESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTCC-EEEE------------EECSTTG
T ss_pred cccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCC-EEEE------------EEcCCcc
Confidence 31 011122221 123457899999988778888888888999997753 2111 1122 21
Q ss_pred ------cccEEEEEEccCCCeEEEEEeCCCeEEEEeC
Q psy4571 250 ------TAKISDFSWNPNEPWVICSVSEDNIMQEYCD 280 (437)
Q Consensus 250 ------~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~ 280 (437)
-.....|+|.|+|+ +.++ +.-+.++.+.-
T Consensus 217 ~~l~~~~~qpEGia~d~~G~-lyIv-sE~n~~y~f~~ 251 (255)
T 3qqz_A 217 RGLSHNIKQAEGVAMDASGN-IYIV-SEPNRFYRFTP 251 (255)
T ss_dssp GGCSSCCCSEEEEEECTTCC-EEEE-ETTTEEEEEEC
T ss_pred CCcccccCCCCeeEECCCCC-EEEE-cCCceEEEEEe
Confidence 12568899999998 5555 56667776654
No 296
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.32 E-value=0.0027 Score=60.88 Aligned_cols=171 Identities=12% Similarity=0.098 Sum_probs=99.9
Q ss_pred CcceEEeeCC-CCCEEEEEECCCcEEEEEcCCCCCCCCeeeecc----CCCCeEEEEE-------eCCCCcEEEEEeCCC
Q psy4571 105 SRQDVAWHLL-HESLFGSVADDQKLMIWDTRSHNVSKPSHTVDA----HTAEVNCLSF-------NPYSEYILATGSADK 172 (437)
Q Consensus 105 ~v~~~~~sp~-~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~----h~~~v~~l~~-------~~~~~~~l~sgs~dg 172 (437)
....|+|+|. +++++++-...+.|++.|++. ..+..+.. .......++| ++++.+++++-..++
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~----~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~ 215 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKN----RMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDG 215 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTT----TEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCT
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCC----CEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCC
Confidence 3568999993 455666655557788899873 22333321 1235899999 999987444444432
Q ss_pred ------eEEEEeCCCCceee-----eEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcC-------CCCCCCCCCC
Q psy4571 173 ------TVALWDLRNLKLKL-----HSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLS-------KIGEEQSTED 234 (437)
Q Consensus 173 ------~i~lwd~~~~~~~~-----~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~-------~~~~~~~~~~ 234 (437)
.|.+.+........ ..+... .....++++|++.+++++-..++.|..+|+. ++........
T Consensus 216 ~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~ 294 (496)
T 3kya_A 216 KGDESPSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVK 294 (496)
T ss_dssp TGGGEEEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGG
T ss_pred CcccCceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccc
Confidence 36666644311101 122222 2345788999766677787788899999997 4332000000
Q ss_pred CCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCC
Q psy4571 235 AEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDS 281 (437)
Q Consensus 235 ~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~ 281 (437)
...+..+.+... +.......|+|+|+|+.+.++-.....|+.++..
T Consensus 295 ~~~g~~~~l~~~-~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~d 340 (496)
T 3kya_A 295 NNPNTFKQLFTI-ADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYD 340 (496)
T ss_dssp GCTTTEEEEEEC-SSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred ccccccceeEec-CCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecC
Confidence 000000112222 2234467899999999666676788899996654
No 297
>3fia_A Intersectin-1; EH 1 domain, NESG, structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 1.45A {Homo sapiens} PDB: 2khn_A
Probab=97.25 E-value=0.00025 Score=53.58 Aligned_cols=54 Identities=37% Similarity=0.596 Sum_probs=48.2
Q ss_pred ccccccCHHHHHHHHHhhhccccccccCCCCcccccHHHHHHHHHhcCCChHhhhcccccC
Q psy4571 366 NSIWSMTDEQREYYKTQFHNLQRHKSVSDPSYHLISGQVARKFFENSKLPVTELRKIWYPD 426 (437)
Q Consensus 366 ~~~w~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~s~~p~~~~~~~w~~~ 426 (437)
...|.++.+++..|...|..+.. .-|.|+|..++.+|.+++||-++|.+||+..
T Consensus 22 ~~~W~it~ee~~~y~~iF~~lD~-------~dG~Isg~elr~~~~~sgLp~~~L~~Iw~la 75 (121)
T 3fia_A 22 LDTWAITVEERAKHDQQFHSLKP-------ISGFITGDQARNFFFQSGLPQPVLAQIWALA 75 (121)
T ss_dssp TTTSCCCHHHHHHHHHHHHHTCC-------BTTBEEHHHHHHHHGGGCCCHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHhCC-------CCCeECHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 45899999999999999998873 3489999999999999999999999999764
No 298
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.17 E-value=0.13 Score=46.57 Aligned_cols=186 Identities=8% Similarity=-0.016 Sum_probs=94.3
Q ss_pred CcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeE-EEEeCCCCc
Q psy4571 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTV-ALWDLRNLK 183 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i-~lwd~~~~~ 183 (437)
.+.++.|+| +..+++ +..|.|.. ..+.+...+.+.....+.+.+..+.+.+++. +++++ .+|.| +-.| .++
T Consensus 81 ~~~~i~~~~--~~~~~~-g~~g~i~~-S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~-~~~~~-~~g~v~~S~D--gG~ 152 (327)
T 2xbg_A 81 RFNSVSFQG--NEGWIV-GEPPIMLH-TTDGGQSWSQIPLDPKLPGSPRLIKALGNGS-AEMIT-NVGAIYRTKD--SGK 152 (327)
T ss_dssp EEEEEEEET--TEEEEE-EETTEEEE-ESSTTSSCEECCCCTTCSSCEEEEEEEETTE-EEEEE-TTCCEEEESS--TTS
T ss_pred cEEEEEecC--CeEEEE-ECCCeEEE-ECCCCCCceECccccCCCCCeEEEEEECCCC-EEEEe-CCccEEEEcC--CCC
Confidence 467788876 345554 44564433 2222222222221112345678888877665 45554 45654 3222 222
Q ss_pred eeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEE-EEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCC
Q psy4571 184 LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHV-WDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNE 262 (437)
Q Consensus 184 ~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~v-wd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~ 262 (437)
.=......+...+..+++.|++. +++.+ .+|.+.. .|-. +.. ...+ .......+..+.+.+++
T Consensus 153 tW~~~~~~~~~~~~~~~~~~~~~-~~~~g-~~G~~~~S~d~g-G~t-----------W~~~--~~~~~~~~~~~~~~~~g 216 (327)
T 2xbg_A 153 NWQALVQEAIGVMRNLNRSPSGE-YVAVS-SRGSFYSTWEPG-QTA-----------WEPH--NRTTSRRLHNMGFTPDG 216 (327)
T ss_dssp SEEEEECSCCCCEEEEEECTTSC-EEEEE-TTSSEEEEECTT-CSS-----------CEEE--ECCSSSCEEEEEECTTS
T ss_pred CCEEeecCCCcceEEEEEcCCCc-EEEEE-CCCcEEEEeCCC-CCc-----------eeEC--CCCCCCccceeEECCCC
Confidence 10112234556789999999886 46555 4555443 3321 111 1111 12334568889999998
Q ss_pred CeEEEEEeCCCeEEEEeCCCCCCceeeeee-ecccCCceeeeecCCCCcccccCC
Q psy4571 263 PWVICSVSEDNIMQEYCDSTDSDTKTMRLD-SIRSNGGISSTASPTASSTASESP 316 (437)
Q Consensus 263 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~s~~g~~l~s~s~ 316 (437)
. ++ .++.+|.+++.+...++.-..+... .........+++.+++.+++.+..
T Consensus 217 ~-~~-~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~ 269 (327)
T 2xbg_A 217 R-LW-MIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGA 269 (327)
T ss_dssp C-EE-EEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEEST
T ss_pred C-EE-EEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeCC
Confidence 7 44 4556788877643323221111111 001123455677788887777653
No 299
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.14 E-value=0.066 Score=49.08 Aligned_cols=192 Identities=10% Similarity=0.106 Sum_probs=103.9
Q ss_pred CcceEEeeCC--CCCEEEEE-EC--CCcEEEEEcCCCCC-CCCeeeeccC-CCCeEEEEEeCCCCcEEEEEe--------
Q psy4571 105 SRQDVAWHLL--HESLFGSV-AD--DQKLMIWDTRSHNV-SKPSHTVDAH-TAEVNCLSFNPYSEYILATGS-------- 169 (437)
Q Consensus 105 ~v~~~~~sp~--~~~~l~~~-~~--dg~v~vwd~~~~~~-~~~~~~~~~h-~~~v~~l~~~~~~~~~l~sgs-------- 169 (437)
....+.+.++ +...|+++ .. +..|.+|+++.... ...+..+.+. -...+++.+.++|.. .++..
T Consensus 113 ~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~f-yvt~~~~ftd~~~ 191 (355)
T 3sre_A 113 NPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHF-YATNDHYFIDPYL 191 (355)
T ss_dssp CEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEE-EEEESCSCSSHHH
T ss_pred eeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCE-EecCCcEeCCccc
Confidence 4556666552 22234333 32 46788888764321 1222333322 246899999999983 66543
Q ss_pred ---------CCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCC
Q psy4571 170 ---------ADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPP 240 (437)
Q Consensus 170 ---------~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~ 240 (437)
..|.|.-+|.. + ...+...-...+.++|+|++++++++-+..+.|..|++........
T Consensus 192 ~~~e~~~~~~~g~vyr~d~~--~--~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~--------- 258 (355)
T 3sre_A 192 KSWEMHLGLAWSFVTYYSPN--D--VRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTP--------- 258 (355)
T ss_dssp HHHHHHTTCCCEEEEEECTT--C--CEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEE---------
T ss_pred ccchhhccCCccEEEEEECC--e--EEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEec---------
Confidence 12455555543 2 2222222345689999999998777777789999999974321111
Q ss_pred ceEEEecCccccEEEEEEcc-CCCeEEEEEeCC-CeEEEEeCCCCCCceeeeeeec-ccCCceeeeecCCCCccccc
Q psy4571 241 ELLFIHGGHTAKISDFSWNP-NEPWVICSVSED-NIMQEYCDSTDSDTKTMRLDSI-RSNGGISSTASPTASSTASE 314 (437)
Q Consensus 241 ~~~~~~~~h~~~v~~l~~~p-~~~~~l~s~~~d-g~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~s~~g~~l~s~ 314 (437)
...+ ......-.++..+ +|. +.+++..+ +.|..|+..........+.... .....+...+..||+.+...
T Consensus 259 --~~~~-~~~g~PDGi~vD~e~G~-lwva~~~~g~~v~~~~P~~~~~s~v~rI~~~~~~~~~v~~v~~ddG~~l~~~ 331 (355)
T 3sre_A 259 --LRVL-SFDTLVDNISVDPVTGD-LWVGCHPNGMRIFFYDAENPPGSEVLRIQDILSEEPKVTVVYAENGTVLQGS 331 (355)
T ss_dssp --EEEE-ECSSEEEEEEECTTTCC-EEEEEESCHHHHHSCCTTSCCCEEEEEEECTTSSSCEEEEEEEECSSSCCSE
T ss_pred --CEEE-eCCCCCceEEEeCCCCc-EEEEecCCceEEEEECCCCCCCCEEEEEEccCCCCcEEEEEEEcCCCEEEee
Confidence 1112 1235678889999 588 66555534 4455555543222222222211 12333444566677765443
No 300
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.06 E-value=0.026 Score=50.83 Aligned_cols=157 Identities=6% Similarity=0.016 Sum_probs=96.9
Q ss_pred CCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEecc----CC--CceEEEEE---cCCCCcEEEEEe------
Q psy4571 149 TAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFES----HK--DEIFQVQW---SPHNETILASSG------ 213 (437)
Q Consensus 149 ~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~----h~--~~v~~v~~---~p~~~~~l~sg~------ 213 (437)
..-.-+++|++....++++.-..++|..||...+......+.. .. ..+..+.| .|+++ ++++..
T Consensus 12 ~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~gr-L~vv~~~~~af~ 90 (334)
T 2p9w_A 12 NLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKR-LFAVMKNAKSFN 90 (334)
T ss_dssp TCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCE-EEEEEEETTTTC
T ss_pred ccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCc-EEEEEccccccc
Confidence 3344578999866654555557999999999854431222222 11 13589999 68875 566443
Q ss_pred -------CCCeEEEEEcC---CCCCCCCCCCCCCCCCceEEEecCc-----------cccEEEEEEccCCCeEEEEEeCC
Q psy4571 214 -------TDRRLHVWDLS---KIGEEQSTEDAEDGPPELLFIHGGH-----------TAKISDFSWNPNEPWVICSVSED 272 (437)
Q Consensus 214 -------~dg~i~vwd~~---~~~~~~~~~~~~~~~~~~~~~~~~h-----------~~~v~~l~~~p~~~~~l~s~~~d 272 (437)
.+..|..+|+. +++.... ..+... ......++..++|+ ..++++..
T Consensus 91 ~~g~~~~g~~~v~~~Dl~~~~tg~~~~~------------~dL~~~~~~~~~~~g~~~~~~nDvavD~~Gn-aYVt~s~~ 157 (334)
T 2p9w_A 91 FADQSSHGASSFHSFNLPLSENSKPVWS------------VNFEKVQDEFEKKAGKRPFGVVQSAQDRDGN-SYVAFALG 157 (334)
T ss_dssp TTSCCSSSCCEEEEEESSCCTTCCCSEE------------EESHHHHHHHHHHHSSCCEEEEEEEECTTSC-EEEEEEES
T ss_pred ccccccCCCCEEEEEcCCcCCCCCEEEE------------ecCccccccccccccccccCCceeEECCCCC-EEEeCCCC
Confidence 26789999998 5443221 111111 12488999999999 67788877
Q ss_pred -CeEEEEeCCCCCCceeeeeeec---ccCCceeeeecCCCCcccccCCCCcc
Q psy4571 273 -NIMQEYCDSTDSDTKTMRLDSI---RSNGGISSTASPTASSTASESPTPTN 320 (437)
Q Consensus 273 -g~i~iwd~~~~~~~~~~~~~~~---~~~~~~~~~~s~~g~~l~s~s~d~~~ 320 (437)
+.|...+.... ....+..... ...+..-++++|+|..|+.....+.+
T Consensus 158 ~~~I~rV~pdG~-~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L 208 (334)
T 2p9w_A 158 MPAIARVSADGK-TVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRAL 208 (334)
T ss_dssp SCEEEEECTTSC-CEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSE
T ss_pred CCeEEEEeCCCC-EEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeE
Confidence 88777776643 3333322111 11234466999999988777667663
No 301
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.04 E-value=0.18 Score=45.82 Aligned_cols=154 Identities=11% Similarity=0.185 Sum_probs=94.0
Q ss_pred CCcEEEEEcCCCCCCCCeeeecc------CC-CCeEEEEE--eCC-CCcEEEEEeCCCeEEEEeCCC---C---ceeeeE
Q psy4571 125 DQKLMIWDTRSHNVSKPSHTVDA------HT-AEVNCLSF--NPY-SEYILATGSADKTVALWDLRN---L---KLKLHS 188 (437)
Q Consensus 125 dg~v~vwd~~~~~~~~~~~~~~~------h~-~~v~~l~~--~~~-~~~~l~sgs~dg~i~lwd~~~---~---~~~~~~ 188 (437)
+++|.+|++... ...+..+.. .. ..+..+++ +|. +...+++...+|.+..|++.. + ...+++
T Consensus 98 ~n~l~vf~iDp~--~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~ 175 (355)
T 3amr_A 98 KNTIEIYAIDGK--NGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRA 175 (355)
T ss_dssp CCEEEEEEECTT--TCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEE
T ss_pred CCeEEEEEECCC--CCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEE
Confidence 578999977421 122433311 11 45667777 774 443377788889999998842 1 122445
Q ss_pred eccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEe-cCc-cccEEEEEE--ccCCC-
Q psy4571 189 FESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIH-GGH-TAKISDFSW--NPNEP- 263 (437)
Q Consensus 189 ~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~-~~h-~~~v~~l~~--~p~~~- 263 (437)
+. ....+..+...+...+ |..+-.|.-|..++.+...... ...+... .++ ...+..|++ .++++
T Consensus 176 f~-lgsq~EgcvvDd~~g~-Lyv~eEd~GIw~~da~p~~~~~---------~~~v~~~~~g~l~aDvEGLai~~~~~g~g 244 (355)
T 3amr_A 176 FK-MNSQTEGMAADDEYGR-LYIAEEDEAIWKFSAEPDGGSN---------GTVIDRADGRHLTRDIEGLTIYYAADGKG 244 (355)
T ss_dssp EE-CSSCEEEEEEETTTTE-EEEEETTTEEEEEECSTTSCSC---------CEEEEEBSSSSBCSCEEEEEEEECGGGCE
T ss_pred ec-CCCCcceEEEcCCCCe-EEEecccceEEEEeCCcCCCCC---------ceEEEEecCCccccCcceEEEEecCCCCE
Confidence 54 3467888888887764 7788888666666654322111 1223332 122 236888887 56666
Q ss_pred eEEEEEeCCCeEEEEeCC-CCCCceeeee
Q psy4571 264 WVICSVSEDNIMQEYCDS-TDSDTKTMRL 291 (437)
Q Consensus 264 ~~l~s~~~dg~i~iwd~~-~~~~~~~~~~ 291 (437)
++++++-.++++.+||.+ +.+.+..+..
T Consensus 245 yLivSsQG~~s~~Vydr~~~~~~vg~f~I 273 (355)
T 3amr_A 245 YLMASSQGNSSYAIYDRQGKNKYVADFRI 273 (355)
T ss_dssp EEEEEEGGGTEEEEEESSTTCCEEEEEEE
T ss_pred EEEEEcCCCCEEEEEECCCCCcEEEEEEe
Confidence 678777788999999997 5555555543
No 302
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.03 E-value=0.18 Score=45.65 Aligned_cols=192 Identities=8% Similarity=-0.014 Sum_probs=99.1
Q ss_pred CCcceEEeeCCCCCEEEEEECCCcEEEEEcCC-CCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCC
Q psy4571 104 LSRQDVAWHLLHESLFGSVADDQKLMIWDTRS-HNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNL 182 (437)
Q Consensus 104 ~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~-~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~ 182 (437)
..+..+.+.+ ++..++++ .+|.| |...+ +..... ....+...+..+++.|++. +++.+...+..+-.|-...
T Consensus 122 ~~~~~i~~~~-~~~~~~~~-~~g~v--~~S~DgG~tW~~--~~~~~~~~~~~~~~~~~~~-~~~~g~~G~~~~S~d~gG~ 194 (327)
T 2xbg_A 122 GSPRLIKALG-NGSAEMIT-NVGAI--YRTKDSGKNWQA--LVQEAIGVMRNLNRSPSGE-YVAVSSRGSFYSTWEPGQT 194 (327)
T ss_dssp SCEEEEEEEE-TTEEEEEE-TTCCE--EEESSTTSSEEE--EECSCCCCEEEEEECTTSC-EEEEETTSSEEEEECTTCS
T ss_pred CCeEEEEEEC-CCCEEEEe-CCccE--EEEcCCCCCCEE--eecCCCcceEEEEEcCCCc-EEEEECCCcEEEEeCCCCC
Confidence 4566777766 35555544 56654 33222 112222 2234556789999999887 3665544444444443111
Q ss_pred ceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEe-cCccccEEEEEEccC
Q psy4571 183 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIH-GGHTAKISDFSWNPN 261 (437)
Q Consensus 183 ~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~l~~~p~ 261 (437)
..... -......+..+++.|++. ++ .++.+|.+++.+...+..-.... .. ..+...+.++.+.++
T Consensus 195 tW~~~-~~~~~~~~~~~~~~~~g~-~~-~~~~~G~~~~s~~D~G~tW~~~~-----------~~~~~~~~~~~~v~~~~~ 260 (327)
T 2xbg_A 195 AWEPH-NRTTSRRLHNMGFTPDGR-LW-MIVNGGKIAFSDPDNSENWGELL-----------SPLRRNSVGFLDLAYRTP 260 (327)
T ss_dssp SCEEE-ECCSSSCEEEEEECTTSC-EE-EEETTTEEEEEETTEEEEECCCB-----------CTTSSCCSCEEEEEESSS
T ss_pred ceeEC-CCCCCCccceeEECCCCC-EE-EEeCCceEEEecCCCCCeeEecc-----------CCcccCCcceEEEEecCC
Confidence 11111 123456788999999886 34 45567888776432221111100 00 012235788999988
Q ss_pred CCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcc
Q psy4571 262 EPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTN 320 (437)
Q Consensus 262 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~ 320 (437)
+. +++. +.+|.+ .+....++.-..+............+.+.+++..++.| .++.+
T Consensus 261 ~~-~~~~-g~~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~~~~~G-~~G~i 315 (327)
T 2xbg_A 261 NE-VWLA-GGAGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQGFILG-QKGIL 315 (327)
T ss_dssp SC-EEEE-ESTTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETTEEEEEC-STTEE
T ss_pred CE-EEEE-eCCCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCCceEEEc-CCceE
Confidence 77 5544 456766 45555554333332111112334556676666655554 45553
No 303
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.02 E-value=0.027 Score=55.68 Aligned_cols=52 Identities=6% Similarity=-0.032 Sum_probs=35.4
Q ss_pred CCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCC-cccccC
Q psy4571 261 NEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTAS-STASES 315 (437)
Q Consensus 261 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~-~l~s~s 315 (437)
.+. +++.++.|+.++.||.++|+.+..+..... .....+.+..+|+ ++++.+
T Consensus 496 agg-lvf~g~~dg~l~A~D~~tG~~lW~~~~~~g--~~a~P~~y~~~G~qYv~~~~ 548 (582)
T 1flg_A 496 AGN-LVFTGTGDGYFKAFDAKSGKELWKFQTGSG--IVSPPITWEQDGEQYLGVTV 548 (582)
T ss_dssp TTT-EEEEECTTSEEEEEETTTCCEEEEEECSSC--CCSCCEEEEETTEEEEEEEE
T ss_pred CCC-EEEEECCCCcEEEEECCCCCEEEEecCCCC--cccCceEEEECCEEEEEEEc
Confidence 355 677799999999999999999888875321 1122245667886 444443
No 304
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=96.86 E-value=0.017 Score=57.23 Aligned_cols=206 Identities=7% Similarity=-0.031 Sum_probs=104.4
Q ss_pred CEEEEEEC-CCcEEEEEc-CCCCCCCCeeeeccCCC-----------CeEEEEEeCCCCc---EEEEEeCCCeEEEEeCC
Q psy4571 117 SLFGSVAD-DQKLMIWDT-RSHNVSKPSHTVDAHTA-----------EVNCLSFNPYSEY---ILATGSADKTVALWDLR 180 (437)
Q Consensus 117 ~~l~~~~~-dg~v~vwd~-~~~~~~~~~~~~~~h~~-----------~v~~l~~~~~~~~---~l~sgs~dg~i~lwd~~ 180 (437)
..+.+++. ++.|.-+|. .+ ++.+-....... ....++++|.+.. .++.++.|+.|.-+|.+
T Consensus 63 g~vyv~~~~~~~v~AlD~~~t---G~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~ 139 (599)
T 1w6s_A 63 GKMYIHTSFPNNTFALGLDDP---GTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAE 139 (599)
T ss_dssp TEEEEECSTTTCEEEEETTCT---TSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETT
T ss_pred CEEEEEeCCCCEEEEEeCCCC---CcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECC
Confidence 34445555 677777887 63 333333321110 0122445443331 27788899999999999
Q ss_pred CCceeeeEeccCC----CceEE-EEEcCCCCcEEEEEe------CCCeEEEEEcCCCCCCCCCCCCCCC------CC---
Q psy4571 181 NLKLKLHSFESHK----DEIFQ-VQWSPHNETILASSG------TDRRLHVWDLSKIGEEQSTEDAEDG------PP--- 240 (437)
Q Consensus 181 ~~~~~~~~~~~h~----~~v~~-v~~~p~~~~~l~sg~------~dg~i~vwd~~~~~~~~~~~~~~~~------~~--- 240 (437)
+++. +....... ..+.+ -.. .++ . ++.++ .++.|+.+|.++++..-+....... +.
T Consensus 140 TG~~-~W~~~~~~~~~~~~~~ssP~v-~~g-~-V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~ 215 (599)
T 1w6s_A 140 TGET-VWKVENSDIKVGSTLTIAPYV-VKD-K-VIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNI 215 (599)
T ss_dssp TCCE-EEEEECCCGGGTCBCCSCCEE-ETT-E-EEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTT
T ss_pred CCCE-EEeecCCCCCccceeecCCEE-ECC-E-EEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCcccccccccccc
Confidence 9876 33332111 01111 111 134 2 44444 3799999999988754331110000 00
Q ss_pred --c--------------eEEEecCccccEEEEEEccCCCeEEEEEeCC----------------CeEEEEeCCCCCCcee
Q psy4571 241 --E--------------LLFIHGGHTAKISDFSWNPNEPWVICSVSED----------------NIMQEYCDSTDSDTKT 288 (437)
Q Consensus 241 --~--------------~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~d----------------g~i~iwd~~~~~~~~~ 288 (437)
. .... .+-...-..+++.+... ++..+..+ +.|..+|.++|+....
T Consensus 216 ~~~~~g~~~~g~~tw~g~~~~-~gg~~~W~~~a~d~~~g-~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~ 293 (599)
T 1w6s_A 216 KNPHYGQKGLGTGTWEGDAWK-IGGGTNWGWYAYDPGTN-LIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFG 293 (599)
T ss_dssp TCGGGCCTTHHHHTSSTTGGG-GCCCCCCSCCEEETTTT-EEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEE
T ss_pred ccccccccccccccCCCccee-cCCCccccceeEeCCCC-EEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeE
Confidence 0 0000 00000011345666666 55566554 4899999999988776
Q ss_pred eeeeecc------cCCceeeeec-CCC---CcccccCCCCcccccccccccccccccchhhhhh
Q psy4571 289 MRLDSIR------SNGGISSTAS-PTA---SSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQ 342 (437)
Q Consensus 289 ~~~~~~~------~~~~~~~~~s-~~g---~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~ 342 (437)
+...... ....+..... .+| ..++.++.++. +.+.|..+|+.+
T Consensus 294 ~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~-----------l~~lD~~tG~~l 346 (599)
T 1w6s_A 294 YQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGI-----------VYTLDRTDGALV 346 (599)
T ss_dssp EESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSE-----------EEEEETTTCCEE
T ss_pred eecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcE-----------EEEEECCCCCEe
Confidence 6542210 0011111222 567 46777888887 555566666554
No 305
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=96.85 E-value=0.24 Score=44.33 Aligned_cols=231 Identities=12% Similarity=0.135 Sum_probs=139.9
Q ss_pred eEEEEEeeecccc-ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEE
Q psy4571 88 SILFFEIIFTQNF-PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166 (437)
Q Consensus 88 ~i~~~~~~~~~~~-~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~ 166 (437)
++.+.|+...... ..+....+.-.+| ....+|.-. ..++.|+|++ ....++...- ..+|.--.|-.+.. |+
T Consensus 50 ~VvIiDl~n~~~~~Rrpi~AdsAIMnP-~~~ViALra-g~~LQiFnle---tK~klks~~~-~e~VvfWkWis~~~--L~ 121 (365)
T 2xzh_A 50 QVVIIDMNDPSNPIRRPISADSAIMNP-ASKVIALKA-GKTLQIFNIE---MKSKMKAHTM-TDDVTFWKWISLNT--VA 121 (365)
T ss_dssp EEEEEETTSTTSCEEEECCCSEEEECS-SSSEEEEEE-TTEEEEEETT---TTEEEEEEEC-SSCEEEEEECSSSE--EE
T ss_pred EEEEEECCCCCCccccccccceeeeCC-CccEEEEec-CCeEEEechH---Hhhhhcceec-CCccEEEEecCCCe--EE
Confidence 4556665543322 2334445666789 577777665 7889999999 3444444433 45788888876554 44
Q ss_pred EEeCCCeEEEEeCCCCceeeeEeccCC----CceEEEEEcCCCCcEEEEEe------CCCeEEEEEcCCCCCCCCCCCCC
Q psy4571 167 TGSADKTVALWDLRNLKLKLHSFESHK----DEIFQVQWSPHNETILASSG------TDRRLHVWDLSKIGEEQSTEDAE 236 (437)
Q Consensus 167 sgs~dg~i~lwd~~~~~~~~~~~~~h~----~~v~~v~~~p~~~~~l~sg~------~dg~i~vwd~~~~~~~~~~~~~~ 236 (437)
--+ +..|.-|++.....|...+..|. ..|..-..+++.++++++|- -.|.+.+|..+..
T Consensus 122 lVT-~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~---------- 190 (365)
T 2xzh_A 122 LVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK---------- 190 (365)
T ss_dssp EEE-SSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT----------
T ss_pred EEc-CCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccc----------
Confidence 444 45799999987666676776553 45777778899998776663 2366888888763
Q ss_pred CCCCceEEEecCccccEEEEEEcc--CCCeEEEEEeC---CCeEEEEeCCCC---CC---ceeeeeee---cccCCceee
Q psy4571 237 DGPPELLFIHGGHTAKISDFSWNP--NEPWVICSVSE---DNIMQEYCDSTD---SD---TKTMRLDS---IRSNGGISS 302 (437)
Q Consensus 237 ~~~~~~~~~~~~h~~~v~~l~~~p--~~~~~l~s~~~---dg~i~iwd~~~~---~~---~~~~~~~~---~~~~~~~~~ 302 (437)
.-+.++||......+.... ....+++.+.. .+.+++-++... .+ .+...... ...+-++.+
T Consensus 191 -----~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVam 265 (365)
T 2xzh_A 191 -----VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAM 265 (365)
T ss_dssp -----EEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEE
T ss_pred -----ccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEE
Confidence 3355788876554433321 11224444432 268888888443 11 11111111 123345555
Q ss_pred eecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCCcccc
Q psy4571 303 TASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESS 353 (437)
Q Consensus 303 ~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~ 353 (437)
..|+.-..+..-+.-|. ++++|+.||.++..-.-..+.+.
T Consensus 266 qvs~kygviyviTK~G~-----------ihlyDleTgt~i~~nrIS~d~iF 305 (365)
T 2xzh_A 266 QISEKHDVVFLITKYGY-----------IHLYDLETGTCIYMNRISGETIF 305 (365)
T ss_dssp EEETTTTEEEEEETTSE-----------EEEEETTTCCEEEEEECCSSCEE
T ss_pred EecccCCEEEEEeCCcE-----------EEEEEcccCcEEEEeccCCCceE
Confidence 66776666666666666 89999999988765544444443
No 306
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.70 E-value=0.36 Score=44.90 Aligned_cols=154 Identities=10% Similarity=0.157 Sum_probs=93.6
Q ss_pred CCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccC----CCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCce------
Q psy4571 115 HESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAH----TAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKL------ 184 (437)
Q Consensus 115 ~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h----~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~------ 184 (437)
++..++.+- ++.||.-++.... ..+.++.. -..|..+..+|+|.+ ||.. .+..|.|-.+..+..
T Consensus 31 n~t~i~~a~-~n~iR~~~i~~~~---~Yk~L~~~~~i~f~~i~qlvlSpsG~l-LAl~-g~~~V~Vv~LP~~~~~~~~~~ 104 (452)
T 3pbp_A 31 NGTRIVFIQ-DNIIRWYNVLTDS---LYHSLNFSRHLVLDDTFHVISSTSGDL-LCLF-NDNEIFVMEVPWGYSNVEDVS 104 (452)
T ss_dssp TTTEEEEEE-TTEEEEEETTTCS---SCEEEECTTTCCCCTTCEEEECTTSSE-EEEE-CSSEEEEEECCTTCSCCCCHH
T ss_pred CCCEEEEEE-CCEEEEEECCCCC---cceEEecCcccccCceeEEEECCCCCE-EEEe-cCCeEEEEEecCccccCcccc
Confidence 455555443 5788888887432 23333322 236788999999994 6555 456899988873221
Q ss_pred -----eeeEecc------CCCceEEEEEcCCCCc--EEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccc
Q psy4571 185 -----KLHSFES------HKDEIFQVQWSPHNET--ILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTA 251 (437)
Q Consensus 185 -----~~~~~~~------h~~~v~~v~~~p~~~~--~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 251 (437)
....+.- ...+|..+.|||-+.. .|++-..|+.|++||+........... .....+-......
T Consensus 105 ~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~----k~~~~fg~d~~~~ 180 (452)
T 3pbp_A 105 IQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLN----KPNNSFGLDARVN 180 (452)
T ss_dssp HHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEES----CCCSEEESCSSCC
T ss_pred cccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchh----ccccccCCCcccc
Confidence 1112221 2467999999996533 577888899999999987432211000 0011123334446
Q ss_pred cEEEEEEccCCCeEEEE--EeCCCeEEEEe
Q psy4571 252 KISDFSWNPNEPWVICS--VSEDNIMQEYC 279 (437)
Q Consensus 252 ~v~~l~~~p~~~~~l~s--~~~dg~i~iwd 279 (437)
.|.+++|.+++- .|.. ...+|.|+-..
T Consensus 181 ev~S~~Fg~~~l-TLYvl~~t~~GDIYAlc 209 (452)
T 3pbp_A 181 DITDLEFSKDGL-TLYCLNTTEGGDIFAFY 209 (452)
T ss_dssp CEEEEEECTTSS-CEEEEECTTSCEEEEES
T ss_pred eEEEEEEcCCCc-EEEEEecCCCCCEEEEC
Confidence 899999999765 3444 34778877553
No 307
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=96.66 E-value=0.11 Score=47.18 Aligned_cols=151 Identities=11% Similarity=0.173 Sum_probs=92.6
Q ss_pred CCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCC----CCc--EEEEEeC---CCeEEEEeCCCCceee
Q psy4571 116 ESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPY----SEY--ILATGSA---DKTVALWDLRNLKLKL 186 (437)
Q Consensus 116 ~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~----~~~--~l~sgs~---dg~i~lwd~~~~~~~~ 186 (437)
..+++...+.+-+.+||+. ++.+..+.. +.++.+..-|. |+. ++++... +++|.+|++......+
T Consensus 40 ~s~ii~t~k~~gL~Vydl~----G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l 113 (355)
T 3amr_A 40 NSKLITTNKKSGLVVYSLD----GKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTL 113 (355)
T ss_dssp GCEEEEEETTTEEEEEETT----SCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCE
T ss_pred ccEEEEEcCCCCEEEEcCC----CcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCce
Confidence 4566667778889999995 566666643 56788887763 111 2333333 5789999774222224
Q ss_pred eEecc------CC-CceEEEEE--cCC-CCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEE
Q psy4571 187 HSFES------HK-DEIFQVQW--SPH-NETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDF 256 (437)
Q Consensus 187 ~~~~~------h~-~~v~~v~~--~p~-~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l 256 (437)
..+.. .. ..++.+++ +|. +...++....+|.+..|++.....-.. ..+.++.+.- .+.+..+
T Consensus 114 ~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~-------~~~lVR~f~l-gsq~Egc 185 (355)
T 3amr_A 114 QSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYI-------SGKKVRAFKM-NSQTEGM 185 (355)
T ss_dssp EECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCE-------EEEEEEEEEC-SSCEEEE
T ss_pred eeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcc-------cceEEEEecC-CCCcceE
Confidence 44421 11 55677888 774 443466677889999999853211100 1144555544 3467788
Q ss_pred EEccCCCeEEEEEeCCCeEEEEeCC
Q psy4571 257 SWNPNEPWVICSVSEDNIMQEYCDS 281 (437)
Q Consensus 257 ~~~p~~~~~l~s~~~dg~i~iwd~~ 281 (437)
...+... .|..+-.|.-|..++.+
T Consensus 186 vvDd~~g-~Lyv~eEd~GIw~~da~ 209 (355)
T 3amr_A 186 AADDEYG-RLYIAEEDEAIWKFSAE 209 (355)
T ss_dssp EEETTTT-EEEEEETTTEEEEEECS
T ss_pred EEcCCCC-eEEEecccceEEEEeCC
Confidence 8888777 56678787667666754
No 308
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=96.43 E-value=0.54 Score=43.03 Aligned_cols=206 Identities=7% Similarity=-0.002 Sum_probs=99.4
Q ss_pred CCcceEEeeCC---CCCEEEEEECC-----CcEEEEEcCCCCC--CCC-eeeec---cCCCCeEEEEEeCCCCcEEEEEe
Q psy4571 104 LSRQDVAWHLL---HESLFGSVADD-----QKLMIWDTRSHNV--SKP-SHTVD---AHTAEVNCLSFNPYSEYILATGS 169 (437)
Q Consensus 104 ~~v~~~~~sp~---~~~~l~~~~~d-----g~v~vwd~~~~~~--~~~-~~~~~---~h~~~v~~l~~~~~~~~~l~sgs 169 (437)
.....++|+|+ ++.++++-... +.|..++...... .+. +..+. +.......++|.|+|. +.++-+
T Consensus 75 ~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~-Lyv~~G 153 (352)
T 2ism_A 75 SGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGM-LYVTTG 153 (352)
T ss_dssp CSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSC-EEEECC
T ss_pred CCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCC-EEEEEC
Confidence 35678999994 34555544432 5677787763210 011 11122 1111236899999996 455533
Q ss_pred C-------------CCeEEEEeCCCC------------ceeeeEeccCCCceEEEEEcC-CCCcEEEEEeCCCeE-----
Q psy4571 170 A-------------DKTVALWDLRNL------------KLKLHSFESHKDEIFQVQWSP-HNETILASSGTDRRL----- 218 (437)
Q Consensus 170 ~-------------dg~i~lwd~~~~------------~~~~~~~~~h~~~v~~v~~~p-~~~~~l~sg~~dg~i----- 218 (437)
. .|.|.-++.+.. ........++ .....++|+| ++. ++++-.....+
T Consensus 154 ~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~-rnp~g~a~d~~~g~-l~v~d~g~~~~~~~~~ 231 (352)
T 2ism_A 154 EVYERELAQDLASLGGKILRLTPEGEPAPGNPFLGRRGARPEVYSLGH-RNPQGLAWHPKTGE-LFSSEHGPSGEQGYGH 231 (352)
T ss_dssp CTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTTTCTTSCTTEEEECC-SEECCCEECTTTCC-EEEEEECC------CC
T ss_pred CCCCCccccCCCCCceEEEEEcCCCCCCCCCcccCCCCCCccEEEEcC-CCcccEEEECCCCC-EEEEEcCCCCCCCCCC
Confidence 2 256666665430 0101111233 2357789999 555 55544333321
Q ss_pred -EEEEcCCCCCCC----CCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCce---eee
Q psy4571 219 -HVWDLSKIGEEQ----STEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTK---TMR 290 (437)
Q Consensus 219 -~vwd~~~~~~~~----~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~---~~~ 290 (437)
.+.-+..+...- .-.........++..+..| .....++| .+|. ++++.-..+.|...+++...... ...
T Consensus 232 dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~-~ap~G~~~-~~G~-l~v~~~~~~~v~~v~~~~~~~~~~~~~~~ 308 (352)
T 2ism_A 232 DEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYFWPQG-FPPGNLAF-FRGD-LYVAGLRGQALLRLVLEGERGRWRVLRVE 308 (352)
T ss_dssp CEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTC-CCEEEEEE-ETTE-EEEEETTTTEEEEEEEEEETTEEEEEEEE
T ss_pred eEEEEeccCCcCCCCcccCCCCCCCCcCCeEecCCC-CCCcceEE-ECCE-EEEEECCCCEEEEEEECCCCcceeecchh
Confidence 233233222100 0000000001223333333 35677888 4665 67676677888888876543211 011
Q ss_pred eeecccCCceeeeecCCCCcccccC
Q psy4571 291 LDSIRSNGGISSTASPTASSTASES 315 (437)
Q Consensus 291 ~~~~~~~~~~~~~~s~~g~~l~s~s 315 (437)
........+..+++.|||.+.++..
T Consensus 309 ~~~~~~~rp~~v~~~pdG~lyv~~~ 333 (352)
T 2ism_A 309 TALSGFGRLREVQVGPDGALYVTTS 333 (352)
T ss_dssp EEEESSCCEEEEEECTTSCEEEEEC
T ss_pred eecccCCCeeEEEECCCCcEEEEEe
Confidence 0001223566778999998766654
No 309
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=96.22 E-value=0.79 Score=42.77 Aligned_cols=230 Identities=12% Similarity=0.131 Sum_probs=140.0
Q ss_pred eEEEEEeeecccc-ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEE
Q psy4571 88 SILFFEIIFTQNF-PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166 (437)
Q Consensus 88 ~i~~~~~~~~~~~-~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~ 166 (437)
.+.+-|+...... ..+....+.-.+| ..+.+|.-. ..++.|+|++ ....++...- ..+|.--.|-.+.. |+
T Consensus 49 ~vvIiDl~~~~~~~rrpi~AdsAIMnP-~~~iiALra-g~~lQiFnle---~K~klks~~~-~e~VvfWkWis~~~--l~ 120 (494)
T 1bpo_A 49 QVVIIDMNDPSNPIRRPISADSAIMNP-ASKVIALKA-GKTLQIFNIE---MKSKMKAHTM-TDDVTFWKWISLNT--VA 120 (494)
T ss_dssp EEEEEETTSTTSCEEEECCCSEEEECS-SSSCEEEEE-TTEEEEEETT---TTEEEEEEEC-SSCCCEEEEEETTE--EE
T ss_pred eEEEEECCCCCcceecccccceeeeCC-CCcEEEEec-CCeEEEEchH---Hhhhhcceec-CCCceEEEecCCCe--EE
Confidence 4556665543332 2344555677788 567776655 7899999998 3344544433 34677777765443 44
Q ss_pred EEeCCCeEEEEeCCCCceeeeEeccCC----CceEEEEEcCCCCcEEEEEe------CCCeEEEEEcCCCCCCCCCCCCC
Q psy4571 167 TGSADKTVALWDLRNLKLKLHSFESHK----DEIFQVQWSPHNETILASSG------TDRRLHVWDLSKIGEEQSTEDAE 236 (437)
Q Consensus 167 sgs~dg~i~lwd~~~~~~~~~~~~~h~----~~v~~v~~~p~~~~~l~sg~------~dg~i~vwd~~~~~~~~~~~~~~ 236 (437)
-.+ +..|.-|++.....|...+..|. ..|..-..+++.++++++|- -.|.+.+|..+...
T Consensus 121 lVT-~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~--------- 190 (494)
T 1bpo_A 121 LVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV--------- 190 (494)
T ss_dssp EEC-SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCC---------
T ss_pred EEc-CCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccc---------
Confidence 443 56899999987666677776553 45777788899998776663 24678888887632
Q ss_pred CCCCceEEEecCccccEEEEEEccCC--CeEEEEEeCC---CeEEEEeCCCC---CC---ceeeeeee---cccCCceee
Q psy4571 237 DGPPELLFIHGGHTAKISDFSWNPNE--PWVICSVSED---NIMQEYCDSTD---SD---TKTMRLDS---IRSNGGISS 302 (437)
Q Consensus 237 ~~~~~~~~~~~~h~~~v~~l~~~p~~--~~~l~s~~~d---g~i~iwd~~~~---~~---~~~~~~~~---~~~~~~~~~ 302 (437)
-+.++||......+....+. ..+++.+... +.+++-++... .+ .+...... ...+-++.+
T Consensus 191 ------sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvam 264 (494)
T 1bpo_A 191 ------SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAM 264 (494)
T ss_dssp ------EEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEE
T ss_pred ------cchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEE
Confidence 35578887665554443211 2355544433 78999888543 11 11111111 123345556
Q ss_pred eecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCCccc
Q psy4571 303 TASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEES 352 (437)
Q Consensus 303 ~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~ 352 (437)
..|+.-..+..-+.-|. ++++|+.||.++..-.-..+.+
T Consensus 265 qvs~kygviyviTK~G~-----------i~lyDleTgt~i~~nrIs~~~i 303 (494)
T 1bpo_A 265 QISEKHDVVFLITKYGY-----------IHLYDLETGTCIYMNRISGETI 303 (494)
T ss_dssp EEETTTTEEEEEETTSE-----------EEEEETTTCCEEEEEECCSSCE
T ss_pred EecccCCEEEEEecCce-----------EEEEecccceeeeeecccCCce
Confidence 66777776666666666 8999999998875443333333
No 310
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=96.16 E-value=0.24 Score=45.45 Aligned_cols=119 Identities=8% Similarity=0.069 Sum_probs=69.3
Q ss_pred CCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCce-eeeEec---cCCCceEEEEEcCC---CCcEEEEEeCC-----Ce
Q psy4571 150 AEVNCLSFNPYSEYILATGSADKTVALWDLRNLKL-KLHSFE---SHKDEIFQVQWSPH---NETILASSGTD-----RR 217 (437)
Q Consensus 150 ~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~-~~~~~~---~h~~~v~~v~~~p~---~~~~l~sg~~d-----g~ 217 (437)
.....++|.|+|. ++.+..+|.|.+++ ++.. .+..+. ........++++|+ +..++++-..+ +.
T Consensus 31 ~~P~~ia~~pdG~--l~V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~ 106 (352)
T 2ism_A 31 EVPWALAFLPDGG--MLIAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQ 106 (352)
T ss_dssp SCEEEEEECTTSC--EEEEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEE
T ss_pred CCceEEEEcCCCe--EEEEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccE
Confidence 3568999999997 44556779999998 3232 121111 12356799999998 55555555433 57
Q ss_pred EEEEEcCCCCCCCCCCCCCCCCCceEEE-ec---CccccEEEEEEccCCCeEEEEEeC-------------CCeEEEEeC
Q psy4571 218 LHVWDLSKIGEEQSTEDAEDGPPELLFI-HG---GHTAKISDFSWNPNEPWVICSVSE-------------DNIMQEYCD 280 (437)
Q Consensus 218 i~vwd~~~~~~~~~~~~~~~~~~~~~~~-~~---~h~~~v~~l~~~p~~~~~l~s~~~-------------dg~i~iwd~ 280 (437)
|..++........ .+.+.. +. +.......++|.|+|. +.++.+. .|.|.-++.
T Consensus 107 v~r~~~~~~~~~~---------~~~l~~~~p~~~~~~h~~~~l~~~pdG~-Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~ 176 (352)
T 2ism_A 107 VVRLRHLGERGVL---------DRVVLDGIPARPHGLHSGGRIAFGPDGM-LYVTTGEVYERELAQDLASLGGKILRLTP 176 (352)
T ss_dssp EEEEEECSSCEEE---------EEEEEEEECCCTTCCCCCCCEEECTTSC-EEEECCCTTCGGGGGCTTCSSSEEEEECT
T ss_pred EEEEEeCCCCcCc---------eEEEEEeCCCCCCCCcCCceEEECCCCC-EEEEECCCCCCccccCCCCCceEEEEEcC
Confidence 8888876431100 011111 22 1111236899999997 6666432 256666666
Q ss_pred CC
Q psy4571 281 ST 282 (437)
Q Consensus 281 ~~ 282 (437)
..
T Consensus 177 dG 178 (352)
T 2ism_A 177 EG 178 (352)
T ss_dssp TS
T ss_pred CC
Confidence 53
No 311
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.15 E-value=0.14 Score=43.00 Aligned_cols=105 Identities=9% Similarity=0.072 Sum_probs=60.7
Q ss_pred CcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCe---eeec--cCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeC
Q psy4571 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPS---HTVD--AHTAEVNCLSFNPYSEYILATGSADKTVALWDL 179 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~---~~~~--~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~ 179 (437)
.+.+++|+| ++.+.++ .+|.+.-.+..+.....-. ..+- +.. .-.++.|.|+|. +.++ .||.|.-++.
T Consensus 42 ~~~~laf~P-~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~-~F~a~~fD~~G~-LYav--~dG~iyr~~p 114 (236)
T 1tl2_A 42 NFKFLFLSP-GGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWN-QFQFLFFDPNGY-LYAV--SKDKLYKASP 114 (236)
T ss_dssp TCSEEEECT-TSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGG-GCSEEEECTTSC-EEEE--ETTEEEEESC
T ss_pred cceeEEECC-CccEEEE--eCCeEEEECCCCCCcccccccccEecccccc-cceEEEECCCCC-EEEe--CCCEEEEeCC
Confidence 566999999 7777776 6777666665432111100 0110 111 137889999997 3444 5699988876
Q ss_pred CCCceee-----eEe-ccCCCceEEEEEcCCCCcEEEEEeCCCeEE
Q psy4571 180 RNLKLKL-----HSF-ESHKDEIFQVQWSPHNETILASSGTDRRLH 219 (437)
Q Consensus 180 ~~~~~~~-----~~~-~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~ 219 (437)
.+....- ..+ ..-=..+..|.+.|+|. +. +.. |+.++
T Consensus 115 P~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~-Ly-av~-dg~ly 157 (236)
T 1tl2_A 115 PQSDTDNWIARATEVGSGGWSGFKFLFFHPNGY-LY-AVH-GQQFY 157 (236)
T ss_dssp CCSTTCCHHHHSEEEECSSGGGEEEEEECTTSC-EE-EEE-TTEEE
T ss_pred CcCCCCceeccccEeccCCCCceEEEEECCCce-EE-EEe-CCcEE
Confidence 4322110 011 10114679999999996 44 444 88754
No 312
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.01 E-value=0.44 Score=51.23 Aligned_cols=207 Identities=14% Similarity=0.189 Sum_probs=127.0
Q ss_pred EecCCCCeEEEecCceEEEEEeeecccc---ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccC-
Q psy4571 73 VVNNYVANISCILNISILFFEIIFTQNF---PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAH- 148 (437)
Q Consensus 73 ~~~~~~~~i~~~~~~~i~~~~~~~~~~~---~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h- 148 (437)
+++|....++--...++.+|++....++ .++..|.--.|-. .+.|+..+ +..|.-|++.. ...+.+.+..|
T Consensus 72 IMnP~~~iiALrag~~lQiFnl~~k~klks~~~~e~VvfWkWis--~~~l~lVT-~~aVyHW~~~~--~s~P~k~fdR~~ 146 (1630)
T 1xi4_A 72 IMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWIS--LNTVALVT-DNAVYHWSMEG--ESQPVKMFDRHS 146 (1630)
T ss_pred ccCCCcceEEEecCCeEEEeehHHhhhhcccccCCCceEEEecC--CCeeEEEc-CCeEEEeccCC--CCccHHHHhcch
Confidence 3455555555556678999998765544 3456666666643 45665555 45799999974 33555555555
Q ss_pred ---CCCeEEEEEeCCCCcEEEEEe------CCCeEEEEeCCCCceeeeEeccCCCceEEEEEc--CCCCcEEEEEeC---
Q psy4571 149 ---TAEVNCLSFNPYSEYILATGS------ADKTVALWDLRNLKLKLHSFESHKDEIFQVQWS--PHNETILASSGT--- 214 (437)
Q Consensus 149 ---~~~v~~l~~~~~~~~~l~sgs------~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~--p~~~~~l~sg~~--- 214 (437)
...|..-.-+++.++++++|- -.|.+.+|..+... -+.+.+|.+....+... +....+++.+..
T Consensus 147 ~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~--sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~ 224 (1630)
T 1xi4_A 147 SLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV--SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQA 224 (1630)
T ss_pred hcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccccc--chhhhHhHhhhheeccCCCCCCceEEEEEEecCC
Confidence 346777788899998777765 35889999988632 45667776655444442 222234443332
Q ss_pred CCeEEEEEcCCC-CCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeee
Q psy4571 215 DRRLHVWDLSKI-GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMR 290 (437)
Q Consensus 215 dg~i~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 290 (437)
.++++|-++... ....... .......+......+...++..++... ++..-+.-|.+.++|++++.++..-+
T Consensus 225 g~kLhi~Ei~~~~~~~~~f~---kk~~~~~~~~~~~~Dfpv~~~vs~k~g-~iy~itk~G~~~~~d~~t~~~i~~~r 297 (1630)
T 1xi4_A 225 GGKLHIIEVGTPPTGNQPFP---KKAVDVFFPPEAQNDFPVAMQISEKHD-VVFLITKYGYIHLYDLETGTCIYMNR 297 (1630)
T ss_pred CceEEEEecCCCccCCCCCc---cccccccCCcccccCcceEEEeccccC-EEEEEecCceEEEEecccchhhhhcc
Confidence 368999998653 1100000 000011111222344556788888777 77778899999999999998775544
No 313
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=95.63 E-value=0.35 Score=40.66 Aligned_cols=148 Identities=11% Similarity=0.078 Sum_probs=78.6
Q ss_pred CCCEEEEEECCCcEEEEEcCCCCCCCC--eeeeccC--CCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEec
Q psy4571 115 HESLFGSVADDQKLMIWDTRSHNVSKP--SHTVDAH--TAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFE 190 (437)
Q Consensus 115 ~~~~l~~~~~dg~v~vwd~~~~~~~~~--~~~~~~h--~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~ 190 (437)
.+.+|++..+| +++.=.+.......- .....+. -..+.+++|+|+|. +.+. .+|.+.-.+..+... ..+.
T Consensus 3 ~~~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~G~-LYaV--~~G~Ly~~~~~t~~~--~~W~ 76 (236)
T 1tl2_A 3 GESMLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGGE-LYGV--LNDKIYKGTPPTHDN--DNWM 76 (236)
T ss_dssp CCCCEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTTSC-EEEE--ETTEEEEESCCCSTT--CCHH
T ss_pred cceEEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECCCcc-EEEE--eCCeEEEECCCCCCc--cccc
Confidence 35677777777 666655543221111 1111122 24678999999887 4555 677766666544221 1111
Q ss_pred cCCCc--------eEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCC
Q psy4571 191 SHKDE--------IFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNE 262 (437)
Q Consensus 191 ~h~~~--------v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~ 262 (437)
+.... -.++.|.|+|. +.++ .||.|.-++..+.....=+. ....+ -.+-=..+..|.|.|+|
T Consensus 77 ~s~t~IG~~Gw~~F~a~~fD~~G~-LYav--~dG~iyr~~pP~~~~~~Wl~-----~a~~v--g~~gw~~~~~lff~p~G 146 (236)
T 1tl2_A 77 GRAKKIGNGGWNQFQFLFFDPNGY-LYAV--SKDKLYKASPPQSDTDNWIA-----RATEV--GSGGWSGFKFLFFHPNG 146 (236)
T ss_dssp HHCEEEECSCGGGCSEEEECTTSC-EEEE--ETTEEEEESCCCSTTCCHHH-----HSEEE--ECSSGGGEEEEEECTTS
T ss_pred ccccEecccccccceEEEECCCCC-EEEe--CCCEEEEeCCCcCCCCceec-----cccEe--ccCCCCceEEEEECCCc
Confidence 11122 37899999996 4555 56988877654322110000 00000 01111467999999999
Q ss_pred CeEEEEEeCCCeEEEEeCC
Q psy4571 263 PWVICSVSEDNIMQEYCDS 281 (437)
Q Consensus 263 ~~~l~s~~~dg~i~iwd~~ 281 (437)
. +. +.. |+.++-+...
T Consensus 147 ~-Ly-av~-dg~lyr~~~P 162 (236)
T 1tl2_A 147 Y-LY-AVH-GQQFYKALPP 162 (236)
T ss_dssp C-EE-EEE-TTEEEEECCC
T ss_pred e-EE-EEe-CCcEEecCCC
Confidence 8 54 444 8876544433
No 314
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=95.56 E-value=0.64 Score=43.26 Aligned_cols=117 Identities=13% Similarity=0.178 Sum_probs=78.9
Q ss_pred ceEeeecC----CCceeEEEecCCCCeEEEecCceEEEEEeeecc---------------ccc-------cCCCcceEEe
Q psy4571 58 EYKIWKKN----TPFLYDLVVNNYVANISCILNISILFFEIIFTQ---------------NFP-------FPLSRQDVAW 111 (437)
Q Consensus 58 ~v~iw~~~----~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~---------------~~~-------~~~~v~~~~~ 111 (437)
..|+++.. -+.+..+..++.+..++..++..|.+-.+..+. .+. .+.+|..+.|
T Consensus 53 ~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlW 132 (452)
T 3pbp_A 53 LYHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLF 132 (452)
T ss_dssp SCEEEECTTTCCCCTTCEEEECTTSSEEEEECSSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEE
T ss_pred cceEEecCcccccCceeEEEECCCCCEEEEecCCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEe
Confidence 45555543 224667778888888888888888888754111 011 1356899999
Q ss_pred eCCC--CCEEEEEECCCcEEEEEcCCCCCCCCeeeec---------cCCCCeEEEEEeCCCCcEEEEEe--CCCeEEEE
Q psy4571 112 HLLH--ESLFGSVADDQKLMIWDTRSHNVSKPSHTVD---------AHTAEVNCLSFNPYSEYILATGS--ADKTVALW 177 (437)
Q Consensus 112 sp~~--~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~---------~h~~~v~~l~~~~~~~~~l~sgs--~dg~i~lw 177 (437)
||.+ +..|++-..|+.|++||+.... .++. .++ .....|.+++|.+++-. |...+ +.|.|.-.
T Consensus 133 HPl~~~ds~LVVLtsD~~Ir~yDl~~s~-~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~lT-LYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 133 HPKSYRDSCIVVLKEDDTITMFDILNSQ-EKPI-VLNKPNNSFGLDARVNDITDLEFSKDGLT-LYCLNTTEGGDIFAF 208 (452)
T ss_dssp CTTBGGGCEEEEEETTSCEEEEETTCTT-SCCE-EESCCCSEEESCSSCCCEEEEEECTTSSC-EEEEECTTSCEEEEE
T ss_pred ccccCCCCeEEEEecCCEEEEEEcccCC-CCCc-chhccccccCCCcccceEEEEEEcCCCcE-EEEEecCCCCCEEEE
Confidence 9964 4588899999999999998532 2333 222 22357889999997765 66655 67777654
No 315
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=95.55 E-value=0.94 Score=48.51 Aligned_cols=222 Identities=10% Similarity=0.055 Sum_probs=114.4
Q ss_pred CeEEEecCceEEEEEee-----eccccccCCCcceEEeeCCCCCEEEEEECC----------------------------
Q psy4571 79 ANISCILNISILFFEII-----FTQNFPFPLSRQDVAWHLLHESLFGSVADD---------------------------- 125 (437)
Q Consensus 79 ~~i~~~~~~~i~~~~~~-----~~~~~~~~~~v~~~~~sp~~~~~l~~~~~d---------------------------- 125 (437)
+.+.+..++.+++..+. ..+.++....+..++++|. .+.++.+..+
T Consensus 707 ~g~v~~~~~~LrI~~i~~~~~~~~~~ipL~~Tprri~y~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 (1158)
T 3ei3_A 707 DSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEV-SQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSS 785 (1158)
T ss_dssp TEEEEECSSCEEEEEECCSSSEEEEEEECSSEEEEEEEEGG-GTEEEEEEEEEEEECSSSSEEESSCCHHHHCSEEEECC
T ss_pred CcEEEEcCCceEEEEecccCCeeEEEEeCCCCceEEEEcCC-CCEEEEEEEeccccccccccchhhhhhhhhhhhhcccc
Confidence 44555666678887753 2344566778889999994 4544443311
Q ss_pred ---------------------CcEEEEEcCCCCCCCCeeeecc-CCCCeEEEEEe---CCCCcEEEEEe----------C
Q psy4571 126 ---------------------QKLMIWDTRSHNVSKPSHTVDA-HTAEVNCLSFN---PYSEYILATGS----------A 170 (437)
Q Consensus 126 ---------------------g~v~vwd~~~~~~~~~~~~~~~-h~~~v~~l~~~---~~~~~~l~sgs----------~ 170 (437)
+.|++.|.. ..+.+..+.- ....+.+++.. .+...+|+.|+ .
T Consensus 786 ~~~~~~~~~~~~~~~g~~~~~s~i~lidp~---t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~ 862 (1158)
T 3ei3_A 786 SKLFSSSTAPHETSFGEEVEVHNLLIIDQH---TFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPK 862 (1158)
T ss_dssp CCCC----------CCCEEEEEEEEEEETT---TCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCC
T ss_pred cccccccccCchhhcCCceeeEEEEEEeCC---CCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCC
Confidence 235555655 2333333221 12335555532 23223577776 3
Q ss_pred CCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCcc
Q psy4571 171 DKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHT 250 (437)
Q Consensus 171 dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 250 (437)
.|.|.++++...+.....-...+++|++++-- +| +++++. ..+|++|++...+... .....+.
T Consensus 863 ~Gri~vf~v~~~kL~lv~~~~v~g~v~al~~~-~g-~Lla~i--g~~l~vy~l~~~~~L~-------------~~~~~~~ 925 (1158)
T 3ei3_A 863 QGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEF-NG-KLLASI--NSTVRLYEWTTEKELR-------------TECNHYN 925 (1158)
T ss_dssp CEEEEEEEEETTEEEEEEEEEESSCEEEEEEE-TT-EEEEEE--TTEEEEEEECTTSCEE-------------EEEEECC
T ss_pred ceEEEEEEEECCEEEEEEEEEcCCcCEEEeee-CC-EEEEEc--CCEEEEEECCCCceEE-------------EEeeccc
Confidence 58899999875443232333457889888754 24 444433 5789999997643111 0011111
Q ss_pred ccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccc
Q psy4571 251 AKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHE 324 (437)
Q Consensus 251 ~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~ 324 (437)
.|..+.....++ +++.|..-..+.+...+.....-..............+.+-.++ .++.+..++.+.+..
T Consensus 926 -~i~~~~l~~~~~-~I~vgD~~~Sv~~~~y~~~~~~L~~~a~D~~~~~vta~~~ld~~-t~l~aD~~gNl~vl~ 996 (1158)
T 3ei3_A 926 -NIMALYLKTKGD-FILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDD-NFLGAENAFNLFVCQ 996 (1158)
T ss_dssp -CSCEEEEEEETT-EEEEEESSBCEEEEEEETTTTEEEEEEECCSCBCEEEEEEEETT-EEEEEETTSEEEEEE
T ss_pred -cEEEEEEeccCC-EEEEEEhhheEEEEEEEcCCCeEEEEEeecccccEEEEEEEccC-cEEEEcCCCcEEEEe
Confidence 122222223456 67677766666665443322111111223333444445554443 455566666655543
No 316
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=95.42 E-value=1.5 Score=41.62 Aligned_cols=112 Identities=12% Similarity=0.190 Sum_probs=62.2
Q ss_pred CCCeEEEEEeCCCCcEEEEEeCC-CeEEEEeCCCCcee-eeEecc------CCCceEEEEEcCC---CCcEEEEEeC---
Q psy4571 149 TAEVNCLSFNPYSEYILATGSAD-KTVALWDLRNLKLK-LHSFES------HKDEIFQVQWSPH---NETILASSGT--- 214 (437)
Q Consensus 149 ~~~v~~l~~~~~~~~~l~sgs~d-g~i~lwd~~~~~~~-~~~~~~------h~~~v~~v~~~p~---~~~~l~sg~~--- 214 (437)
-.....++|.|+|+ ++++ ... +.|++++..++... +..+.. .......|+|+|+ +..+.++-+.
T Consensus 26 l~~P~~~a~~pdG~-l~V~-e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~ 103 (454)
T 1cru_A 26 LNKPHALLWGPDNQ-IWLT-ERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNP 103 (454)
T ss_dssp CSSEEEEEECTTSC-EEEE-ETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECT
T ss_pred CCCceEEEEcCCCc-EEEE-EcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEecccc
Confidence 34578999999998 4555 455 47988886543321 222221 2456789999996 5555555442
Q ss_pred ---------CCeEEEEEcCCCCCCCCCCCCCCCCCceEEE-ec-CccccEEEEEEccCCCeEEEEEe
Q psy4571 215 ---------DRRLHVWDLSKIGEEQSTEDAEDGPPELLFI-HG-GHTAKISDFSWNPNEPWVICSVS 270 (437)
Q Consensus 215 ---------dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~-~~-~h~~~v~~l~~~p~~~~~l~s~~ 270 (437)
...|.-++......... ..+.+.. +. ........|+|.|||. +.++.+
T Consensus 104 ~~~~~~~~~~~~v~r~~~~~~~~~~~-------~~~~i~~~~p~~~~H~~~~l~f~pDG~-Lyv~~G 162 (454)
T 1cru_A 104 KSTDKELPNQTIIRRYTYNKSTDTLE-------KPVDLLAGLPSSKDHQSGRLVIGPDQK-IYYTIG 162 (454)
T ss_dssp TC--CCSCEEEEEEEEEEETTTTEEE-------EEEEEEEEECCCSSCCEEEEEECTTSC-EEEEEC
T ss_pred CCCccccccccEEEEEEECCCCCCcC-------CcEEEEEcCCCCCCCCCCeEeECCCCe-EEEEEC
Confidence 23455565543211000 0112221 21 1122478999999998 555544
No 317
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=95.38 E-value=1.6 Score=39.88 Aligned_cols=203 Identities=8% Similarity=0.016 Sum_probs=99.7
Q ss_pred CcceEEeeCC---CCCEEEEEEC---C----CcEEEEEcCCCCC----CCCe-eeec-cCCCCeEEEEEeCCCCcEEEEE
Q psy4571 105 SRQDVAWHLL---HESLFGSVAD---D----QKLMIWDTRSHNV----SKPS-HTVD-AHTAEVNCLSFNPYSEYILATG 168 (437)
Q Consensus 105 ~v~~~~~sp~---~~~~l~~~~~---d----g~v~vwd~~~~~~----~~~~-~~~~-~h~~~v~~l~~~~~~~~~l~sg 168 (437)
....|+|+|+ ++.++++-+. + +.|..++...... .+.+ ..+. ........++|.|+|. ++++-
T Consensus 74 g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~-Lyvt~ 152 (354)
T 3a9g_A 74 GLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGM-LYITT 152 (354)
T ss_dssp SEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSC-EEEEC
T ss_pred ceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCc-EEEEE
Confidence 4678999995 3555544432 2 5677777653210 0111 1121 1111246799999997 45553
Q ss_pred eC-------------CCeEEEEeCCCC--------ceeeeEeccCCCceEEEEEcC-CCCcEEEEEeCCC---eEEEEEc
Q psy4571 169 SA-------------DKTVALWDLRNL--------KLKLHSFESHKDEIFQVQWSP-HNETILASSGTDR---RLHVWDL 223 (437)
Q Consensus 169 s~-------------dg~i~lwd~~~~--------~~~~~~~~~h~~~v~~v~~~p-~~~~~l~sg~~dg---~i~vwd~ 223 (437)
+. .|.|.-.+.+.. ...+. ..++.. ...++|+| ++. ++++-...+ .|.+.
T Consensus 153 G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~~~~i~-a~G~rn-p~Gla~d~~~g~-l~v~d~g~~~~dei~~i-- 227 (354)
T 3a9g_A 153 GDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFPNSPIW-SYGHRN-PQGIDWHRASGV-MVATEHGPVGHDEVNII-- 227 (354)
T ss_dssp CCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSSTTCCEE-EECCSC-CCEEEECTTTCC-EEEEECCSSSCCEEEEE--
T ss_pred CCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCCCCcEE-EEccCC-cceEEEeCCCCC-EEEEecCCCCCcEEEEe--
Confidence 32 245666665431 01111 223433 46899999 565 454433222 24333
Q ss_pred CCCCCC----CCCCCCCCCCCceEEEe-cCccccEEEEEEc-------cCCCeEEEEEeCCCeEEEEeCCCCCCceee-e
Q psy4571 224 SKIGEE----QSTEDAEDGPPELLFIH-GGHTAKISDFSWN-------PNEPWVICSVSEDNIMQEYCDSTDSDTKTM-R 290 (437)
Q Consensus 224 ~~~~~~----~~~~~~~~~~~~~~~~~-~~h~~~v~~l~~~-------p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~-~ 290 (437)
..+... ..-.........++..+ ..| .....++|. .+|. ++++.-..+.|...++......... .
T Consensus 228 ~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~-~ap~G~~~y~g~~fp~~~G~-l~v~~~~~~~v~~~~~~~~g~~~~~~~ 305 (354)
T 3a9g_A 228 LKGGNYGWPLATGKAGRGEFVDPVIDTGSET-WAPSGASFVHGDMFPGLRGW-LLIACLRGSMLAAVNFGDNMEVRKIST 305 (354)
T ss_dssp CTTCBCCTTTCCSCCCCTTSCCCSEECTTCC-CCEEEEEECCSSSCGGGTTE-EEEEETTTTEEEEEEECGGGCEEEEEE
T ss_pred cCCCcCCCCcccCCCCCCCCcCCEeecCCCC-cCCcceEEECCCCCcccCCc-EEEEEcCCCEEEEEEECCCCcccceee
Confidence 222210 00000000001222333 233 467888884 4565 7777777788988888753222111 1
Q ss_pred eeecccCCceeeeecCCCCcccccC
Q psy4571 291 LDSIRSNGGISSTASPTASSTASES 315 (437)
Q Consensus 291 ~~~~~~~~~~~~~~s~~g~~l~s~s 315 (437)
........+..+++.|||.+.++..
T Consensus 306 ~~~~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 306 FFKNVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp ECTTTSCCEEEEEECTTSCEEEEEC
T ss_pred eccCCCCCeeEEEECCCCcEEEEEe
Confidence 1111123466778999998766654
No 318
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=95.32 E-value=0.9 Score=40.15 Aligned_cols=195 Identities=11% Similarity=0.051 Sum_probs=92.2
Q ss_pred CCCEEEEEECC-----CcEEEEEcCCCCC--CCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCC-----CeEEEEeCCCC
Q psy4571 115 HESLFGSVADD-----QKLMIWDTRSHNV--SKPSHTVDAHTAEVNCLSFNPYSEYILATGSAD-----KTVALWDLRNL 182 (437)
Q Consensus 115 ~~~~l~~~~~d-----g~v~vwd~~~~~~--~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~d-----g~i~lwd~~~~ 182 (437)
++.+++.|+.+ ..+.+||+.+... ...+..+.........+.. ++. +++.|+.+ ..+.++|+.+.
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~--~~~-lyv~GG~~~~~~~~~~~~~d~~~~ 138 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL--GDM-IYVSGGFDGSRRHTSMERYDPNID 138 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE--TTE-EEEECCBCSSCBCCEEEEEETTTT
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEE--CCE-EEEEcccCCCcccceEEEEcCCCC
Confidence 45677777654 4688999875421 1222222111112222222 344 67777654 35889998875
Q ss_pred ceeee-EeccCCCceEEEEEcCCCCcEEEEEeCC-----CeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEE
Q psy4571 183 KLKLH-SFESHKDEIFQVQWSPHNETILASSGTD-----RRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDF 256 (437)
Q Consensus 183 ~~~~~-~~~~h~~~v~~v~~~p~~~~~l~sg~~d-----g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l 256 (437)
+.... .+......-..+.+ ++. +++.|+.+ ..+.+||+.+..-... ............+
T Consensus 139 ~W~~~~~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~~~~~d~~~~~W~~~------------~~~p~~r~~~~~~ 203 (301)
T 2vpj_A 139 QWSMLGDMQTAREGAGLVVA--SGV-IYCLGGYDGLNILNSVEKYDPHTGHWTNV------------TPMATKRSGAGVA 203 (301)
T ss_dssp EEEEEEECSSCCBSCEEEEE--TTE-EEEECCBCSSCBCCCEEEEETTTTEEEEE------------CCCSSCCBSCEEE
T ss_pred eEEECCCCCCCcccceEEEE--CCE-EEEECCCCCCcccceEEEEeCCCCcEEeC------------CCCCcccccceEE
Confidence 53211 11111111122222 444 67777654 3588888876532111 0000111111222
Q ss_pred EEccCCCeEEEEEeCC-----CeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCccccccccccccc
Q psy4571 257 SWNPNEPWVICSVSED-----NIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGL 331 (437)
Q Consensus 257 ~~~p~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i 331 (437)
.+ ++. +++.|+.+ ..+.+||+.+.+-...-.. ........+..-++++++.|+.++.. ....+
T Consensus 204 ~~--~~~-i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~---p~~r~~~~~~~~~~~i~v~GG~~~~~------~~~~v 271 (301)
T 2vpj_A 204 LL--NDH-IYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSM---TTPRCYVGATVLRGRLYAIAGYDGNS------LLSSI 271 (301)
T ss_dssp EE--TTE-EEEECCBCSSSBCCCEEEEETTTTEEEEECCC---SSCCBSCEEEEETTEEEEECCBCSSS------BEEEE
T ss_pred EE--CCE-EEEEeCCCCCcccceEEEEeCCCCcEEECCCC---CCcccceeEEEECCEEEEEcCcCCCc------ccccE
Confidence 22 444 77777764 4689999987643221111 11111112333467777777655431 11225
Q ss_pred ccccchhh
Q psy4571 332 VLFDILVC 339 (437)
Q Consensus 332 ~~wd~~~~ 339 (437)
.++|..+.
T Consensus 272 ~~yd~~~~ 279 (301)
T 2vpj_A 272 ECYDPIID 279 (301)
T ss_dssp EEEETTTT
T ss_pred EEEcCCCC
Confidence 66666543
No 319
>2qpt_A EH domain-containing protein-2; protein-nucleotide complex, membrane protein, endocytosis; HET: ANP; 3.10A {Mus musculus}
Probab=95.15 E-value=0.0083 Score=58.72 Aligned_cols=52 Identities=29% Similarity=0.573 Sum_probs=44.2
Q ss_pred ccccCHHHHHHHHHhhhccccccccCCCCcccccHHHHHHHHHhcCCChHhhhcccccCC
Q psy4571 368 IWSMTDEQREYYKTQFHNLQRHKSVSDPSYHLISGQVARKFFENSKLPVTELRKIWYPDS 427 (437)
Q Consensus 368 ~w~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~s~~p~~~~~~~w~~~~ 427 (437)
-|.+ .+++..|...|..+. +.-|.++|.+++.+|.+|+||-..|.+||++..
T Consensus 450 ~w~~-~~~~~~y~~~F~~~~-------~~~g~i~g~~a~~~~~~s~Lp~~~L~~IW~l~D 501 (550)
T 2qpt_A 450 EWVV-TKDKSKYDEIFYNLA-------PADGKLSGSKAKTWMVGTKLPNSVLGRIWKLSD 501 (550)
T ss_dssp -CTT-TTTHHHHHHHHHHTC-------CSSSEECHHHHHHHHHHTTCCHHHHHHHHHHHC
T ss_pred CCCC-HHHHHHHHHHHHhcC-------CCCCeecHHHHHHHHHHcCCCHHHHHHHhcccC
Confidence 5875 557888999999887 333899999999999999999999999998753
No 320
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=95.08 E-value=1.8 Score=39.35 Aligned_cols=158 Identities=14% Similarity=0.123 Sum_probs=85.1
Q ss_pred CCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCcee-eeEe----ccCCCceEEEEEcCC---CCcEEEEE--eCCCeE
Q psy4571 149 TAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLK-LHSF----ESHKDEIFQVQWSPH---NETILASS--GTDRRL 218 (437)
Q Consensus 149 ~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~-~~~~----~~h~~~v~~v~~~p~---~~~~l~sg--~~dg~i 218 (437)
-.....++|.|+|. ++++--..|.|++++...+... +..+ .........++++|+ +..+.++- ..++.|
T Consensus 31 L~~P~~ia~~pdG~-llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v 109 (347)
T 3das_A 31 LNSPWGLAPLPGGD-LLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRI 109 (347)
T ss_dssp CSSEEEEEECTTSC-EEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEE
T ss_pred CCCceEEEEcCCCc-EEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEE
Confidence 44678999999998 4555544899999987654421 2111 123456899999996 34444432 244566
Q ss_pred EEEEcCCCCCCCCCCCCCCCCCceEEE-e---cCccccEEEEEEccCCCeEEEEEeC-------------CCeEEEEeCC
Q psy4571 219 HVWDLSKIGEEQSTEDAEDGPPELLFI-H---GGHTAKISDFSWNPNEPWVICSVSE-------------DNIMQEYCDS 281 (437)
Q Consensus 219 ~vwd~~~~~~~~~~~~~~~~~~~~~~~-~---~~h~~~v~~l~~~p~~~~~l~s~~~-------------dg~i~iwd~~ 281 (437)
.-|.+........ .....+.+.. + ..| ....|.|.|||. +.++.+. .|.|.-.+..
T Consensus 110 ~R~~~~~~~~~~~----~~~~~~~i~~~~p~~~~H--~g~~l~fgpDG~-Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~d 182 (347)
T 3das_A 110 VRMLYDEKKPSGE----QLGAPDTVFRGIPKGVIH--NGGRIAFGPDKM-LYAGTGESGDTGLSQDRKSLGGKILRMTPD 182 (347)
T ss_dssp EEEEBCTTSCTTC----CBCCCEEEEEEECCCSSC--CCCCEEECTTSC-EEEECBCTTCGGGTTCTTCSTTCEEEECTT
T ss_pred EEEEeCCCCcccc----cCCCcEEEEEcCCCCCCc--cCccccCCCCCC-EEEEECCCCCCccccCCCCCCCEEEEEeCC
Confidence 6666654221000 0001122221 2 123 346799999998 6666442 3455555554
Q ss_pred CCC----CceeeeeeecccCCceeeeecCCCCccccc
Q psy4571 282 TDS----DTKTMRLDSIRSNGGISSTASPTASSTASE 314 (437)
Q Consensus 282 ~~~----~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~ 314 (437)
..- +................++|+|+|.++++-
T Consensus 183 G~ip~~nPf~~~~i~a~G~RNp~Gla~dp~G~L~~~d 219 (347)
T 3das_A 183 GEPAPGNPFPGSPVYSYGHRNVQGLAWDDKQRLFASE 219 (347)
T ss_dssp SSBCTTCSSTTCCEEEBCCSBCCEEEECTTCCEEEEE
T ss_pred CCccCCCCCCCCeEEeeCCCCcceEEECCCCCEEEEe
Confidence 220 000001112223345667889988766654
No 321
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=95.02 E-value=2 Score=39.12 Aligned_cols=69 Identities=12% Similarity=0.073 Sum_probs=41.8
Q ss_pred EEecCccccEEEEEEcc-------CCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCccccc
Q psy4571 244 FIHGGHTAKISDFSWNP-------NEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASE 314 (437)
Q Consensus 244 ~~~~~h~~~v~~l~~~p-------~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~ 314 (437)
..+..| .....+.|.. +|. ++++.-..+.|...++..++..............+..+++.|||.+.++.
T Consensus 265 ~~~~~~-~ap~G~~~y~g~~fp~~~g~-l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~t 340 (353)
T 2g8s_A 265 FYWKDS-PAVSGMAFYNSDKFPQWQQK-LFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGYLYVLT 340 (353)
T ss_dssp EEESSC-CCEEEEEEECCSSSGGGTTE-EEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSCEEEEE
T ss_pred EEeCCC-cCcceeEEECCccCcccCCc-EEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCcEEEEE
Confidence 334334 4678888864 455 77777778888888887653322222111112356777899999876653
No 322
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=95.02 E-value=0.83 Score=49.19 Aligned_cols=231 Identities=12% Similarity=0.134 Sum_probs=132.4
Q ss_pred eEEEEEeeecccc-ccCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEE
Q psy4571 88 SILFFEIIFTQNF-PFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166 (437)
Q Consensus 88 ~i~~~~~~~~~~~-~~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~ 166 (437)
+|.+.|+...... ..+....+.-.+| ..+.+|.-. ..++.|+|+++ ...+....- ..+|.--.|-.... |+
T Consensus 49 ~vvIidl~~~~~~~rrpi~AdsAIMnP-~~~iiALra-g~~lQiFnl~~---k~klks~~~-~e~VvfWkWis~~~--l~ 120 (1630)
T 1xi4_A 49 QVVIIDMNDPSNPIRRPISADSAIMNP-ASKVIALKA-GKTLQIFNIEM---KSKMKAHTM-TDDVTFWKWISLNT--VA 120 (1630)
T ss_pred eEEEEECCCCCCcccccccchhhccCC-CcceEEEec-CCeEEEeehHH---hhhhccccc-CCCceEEEecCCCe--eE
Confidence 4556665544332 2233444566788 466666554 78999999984 333333322 34677777865544 43
Q ss_pred EEeCCCeEEEEeCCCCceeeeEeccC----CCceEEEEEcCCCCcEEEEEe------CCCeEEEEEcCCCCCCCCCCCCC
Q psy4571 167 TGSADKTVALWDLRNLKLKLHSFESH----KDEIFQVQWSPHNETILASSG------TDRRLHVWDLSKIGEEQSTEDAE 236 (437)
Q Consensus 167 sgs~dg~i~lwd~~~~~~~~~~~~~h----~~~v~~v~~~p~~~~~l~sg~------~dg~i~vwd~~~~~~~~~~~~~~ 236 (437)
-.+ +..|.-|++.....|...+..| ...|..-..+++.++++++|- -.|.+.+|.......
T Consensus 121 lVT-~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~s-------- 191 (1630)
T 1xi4_A 121 LVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS-------- 191 (1630)
T ss_pred EEc-CCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccc--------
Confidence 333 4579999997655666556555 456777788899998766663 347788888766422
Q ss_pred CCCCceEEEecCccccEEEEEEc--cCCCeEEEEEeC---CCeEEEEeCCCC-CCceee-----ee---eecccCCceee
Q psy4571 237 DGPPELLFIHGGHTAKISDFSWN--PNEPWVICSVSE---DNIMQEYCDSTD-SDTKTM-----RL---DSIRSNGGISS 302 (437)
Q Consensus 237 ~~~~~~~~~~~~h~~~v~~l~~~--p~~~~~l~s~~~---dg~i~iwd~~~~-~~~~~~-----~~---~~~~~~~~~~~ 302 (437)
+.+.||......+... +....+++.+.. .+.++|-++... .....+ .. ......-++.+
T Consensus 192 -------Q~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~ 264 (1630)
T 1xi4_A 192 -------QPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAM 264 (1630)
T ss_pred -------hhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEE
Confidence 2356666544443332 122224433322 368888887543 000111 11 11123344555
Q ss_pred eecCCCCcccccCCCCcccccccccccccccccchhhhhhhhhcCCCcccc
Q psy4571 303 TASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESS 353 (437)
Q Consensus 303 ~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~~~~~~h~~~~~ 353 (437)
..|+.-..+..-+.-|. +.++|+.||..+..-.-..+.+.
T Consensus 265 ~vs~k~g~iy~itk~G~-----------~~~~d~~t~~~i~~~ris~~~iF 304 (1630)
T 1xi4_A 265 QISEKHDVVFLITKYGY-----------IHLYDLETGTCIYMNRISGETIF 304 (1630)
T ss_pred EeccccCEEEEEecCce-----------EEEEecccchhhhhccccCCceE
Confidence 66666666666666666 89999999988755433333333
No 323
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=94.89 E-value=0.97 Score=41.34 Aligned_cols=152 Identities=8% Similarity=-0.010 Sum_probs=82.9
Q ss_pred CCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCceeeeEec---cCCCceEEEEEcCC---CCcEEEEEeC---C----C
Q psy4571 150 AEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFE---SHKDEIFQVQWSPH---NETILASSGT---D----R 216 (437)
Q Consensus 150 ~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~---~h~~~v~~v~~~p~---~~~~l~sg~~---d----g 216 (437)
.....++|.|+|. |+.+..+|.|+++|. ++...+..+. ........++++|+ +..++++-+. + .
T Consensus 29 ~~P~~ia~~pdG~--l~V~e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~ 105 (354)
T 3a9g_A 29 EVPWSIAPLGGGR--YLVTERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRN 105 (354)
T ss_dssp SCEEEEEEEETTE--EEEEETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEE
T ss_pred CCCeEEEEcCCCe--EEEEeCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcce
Confidence 3578999999987 555567799999974 3332222221 12356889999998 5555555442 3 5
Q ss_pred eEEEEEcCCCCCCCCCCCCCCCCCceEEE-ec-CccccEEEEEEccCCCeEEEEEeC-------------CCeEEEEeCC
Q psy4571 217 RLHVWDLSKIGEEQSTEDAEDGPPELLFI-HG-GHTAKISDFSWNPNEPWVICSVSE-------------DNIMQEYCDS 281 (437)
Q Consensus 217 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~-~~-~h~~~v~~l~~~p~~~~~l~s~~~-------------dg~i~iwd~~ 281 (437)
.|..|+......... ..+.+.. +. +.......|+|.|+|. +.++.+. .|.|.-.+..
T Consensus 106 ~v~r~~~~~~~~~~~-------~~~~l~~~~~~~~~h~~~~l~~~pDG~-Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~d 177 (354)
T 3a9g_A 106 RVIRGRLDGSTFKLK-------EVKTLIDGIPGAYIHNGGRIRFGPDGM-LYITTGDAADPRLAQDLSSLAGKILRVDEE 177 (354)
T ss_dssp EEEEEEECSSSCCEE-------EEEEEEEEEECCSSCCCCCEEECTTSC-EEEECCCTTCGGGGTCTTCCSSEEEEECTT
T ss_pred EEEEEEECCCCcCcC-------ccEEEEEcCCCCCCcCCceEEECCCCc-EEEEECCCCCCccccCCCCCCeEEEEEcCC
Confidence 677777764310000 0111111 11 1111246799999998 6666432 2456666654
Q ss_pred CCC-------CceeeeeeecccCCceeeeecC-CCCcccccC
Q psy4571 282 TDS-------DTKTMRLDSIRSNGGISSTASP-TASSTASES 315 (437)
Q Consensus 282 ~~~-------~~~~~~~~~~~~~~~~~~~~s~-~g~~l~s~s 315 (437)
..- ....+ .........++|+| +|.++++-.
T Consensus 178 G~~p~~npf~~~~i~---a~G~rnp~Gla~d~~~g~l~v~d~ 216 (354)
T 3a9g_A 178 GRPPADNPFPNSPIW---SYGHRNPQGIDWHRASGVMVATEH 216 (354)
T ss_dssp SCCCTTSSSTTCCEE---EECCSCCCEEEECTTTCCEEEEEC
T ss_pred CCCCCCCCCCCCcEE---EEccCCcceEEEeCCCCCEEEEec
Confidence 320 01111 11233455678999 676655543
No 324
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=94.55 E-value=2.9 Score=39.63 Aligned_cols=105 Identities=14% Similarity=0.264 Sum_probs=57.7
Q ss_pred CcceEEeeCCCCCEEEEEECC-CcEEEEEcCCCCCCCCeeeecc------CCCCeEEEEEeCC---CCcEEEEEeC----
Q psy4571 105 SRQDVAWHLLHESLFGSVADD-QKLMIWDTRSHNVSKPSHTVDA------HTAEVNCLSFNPY---SEYILATGSA---- 170 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~~d-g~v~vwd~~~~~~~~~~~~~~~------h~~~v~~l~~~~~---~~~~l~sgs~---- 170 (437)
....|+|.| ++.++++ ... +.|++++..++. ...+..+.. ..+....|+|+|+ +..+.++-+.
T Consensus 28 ~P~~~a~~p-dG~l~V~-e~~gg~I~~~~~~~g~-~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~ 104 (454)
T 1cru_A 28 KPHALLWGP-DNQIWLT-ERATGKILRVNPESGS-VKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPK 104 (454)
T ss_dssp SEEEEEECT-TSCEEEE-ETTTCEEEEECTTTCC-EEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTT
T ss_pred CceEEEEcC-CCcEEEE-EcCCCEEEEEECCCCc-EeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccC
Confidence 346899999 5666655 455 468888764321 112222211 2456789999996 5554454432
Q ss_pred --------CCeEEEEeCCCCc------eeee-Eecc-CCCceEEEEEcCCCCcEEEEEe
Q psy4571 171 --------DKTVALWDLRNLK------LKLH-SFES-HKDEIFQVQWSPHNETILASSG 213 (437)
Q Consensus 171 --------dg~i~lwd~~~~~------~~~~-~~~~-h~~~v~~v~~~p~~~~~l~sg~ 213 (437)
...|.-++..... ..+. .+.. .......++|.|+|. ++++.+
T Consensus 105 ~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~-Lyv~~G 162 (454)
T 1cru_A 105 STDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQK-IYYTIG 162 (454)
T ss_dssp C--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSC-EEEEEC
T ss_pred CCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCe-EEEEEC
Confidence 2345555543211 1111 1211 123468999999997 555544
No 325
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=94.48 E-value=0.97 Score=41.31 Aligned_cols=148 Identities=12% Similarity=0.127 Sum_probs=81.3
Q ss_pred CeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCcee--eeEe----ccCCCceEEEEEcCC---CCcEEEEEeC-------
Q psy4571 151 EVNCLSFNPYSEYILATGSADKTVALWDLRNLKLK--LHSF----ESHKDEIFQVQWSPH---NETILASSGT------- 214 (437)
Q Consensus 151 ~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~~--~~~~----~~h~~~v~~v~~~p~---~~~~l~sg~~------- 214 (437)
....++|.|+|++ |+.+...|.|++++... ... +..+ .........++++|+ +.++.++-..
T Consensus 19 ~P~~i~~~pdG~~-l~V~e~~G~i~~~~~~g-~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~ 96 (353)
T 2g8s_A 19 HPWALAFLPDNHG-MLITLRGGELRHWQAGK-GLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKA 96 (353)
T ss_dssp SEEEEEECSTTCC-EEEEETTTEEEEEETTT-EECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCE
T ss_pred CcEEEEEcCCCCE-EEEEeCCceEEEEeCCC-ceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCc
Confidence 5689999999985 55666789999998543 210 1111 112346789999996 5555555433
Q ss_pred CCeEEEEEcCCCCCCCCCCCCCCCCCceEEE-e-----cCccccEEEEEEccCCCeEEEEEeC-------------CCeE
Q psy4571 215 DRRLHVWDLSKIGEEQSTEDAEDGPPELLFI-H-----GGHTAKISDFSWNPNEPWVICSVSE-------------DNIM 275 (437)
Q Consensus 215 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~-~-----~~h~~~v~~l~~~p~~~~~l~s~~~-------------dg~i 275 (437)
...|..+++........ ..+.+.. + ..|. ...|+|.|+|. +.++.+. .|.|
T Consensus 97 ~~~v~r~~~~~~~~~~~-------~~~~i~~~~p~~~~~~h~--~~~l~~~pdG~-Lyv~~Gd~~~~~~~q~~~~~~g~I 166 (353)
T 2g8s_A 97 GTAVGYGRLSDDLSKVT-------DFRTVFRQMPKLSTGNHF--GGRLVFDGKGY-LFIALGENNQRPTAQDLDKLQGKL 166 (353)
T ss_dssp EEEEEEEEECTTSSBEE-------EEEEEEECSSCCBSSSCC--CCCEEECSSSE-EEEEECCTTCGGGGGCTTSCTTEE
T ss_pred eeEEEEEEECCCCCCCC-------ceEEEEEECCCCCCCccc--CccEEECCCCc-EEEEECCCCCCCccCCCCCCCeEE
Confidence 23566666654311100 0011111 1 1232 35799999996 6655443 2467
Q ss_pred EEEeCCCCC------------CceeeeeeecccCCceeeeecC-CCCcccc
Q psy4571 276 QEYCDSTDS------------DTKTMRLDSIRSNGGISSTASP-TASSTAS 313 (437)
Q Consensus 276 ~iwd~~~~~------------~~~~~~~~~~~~~~~~~~~~s~-~g~~l~s 313 (437)
.-.+....- ....+. ........++|.| +|.++++
T Consensus 167 ~ri~~dG~~p~~npf~~~~~~~~~i~a---~G~rnp~gl~~d~~~g~l~~~ 214 (353)
T 2g8s_A 167 VRLTDQGEIPDDNPFIKESGVRAEIWS---YGIRNPQGMAMNPWSNALWLN 214 (353)
T ss_dssp EEEETTSCCCTTCTTTTSTTSCTTEEE---ECCSEEEEEEEETTTTEEEEE
T ss_pred EEECCCCCCCCCCCCcCCCCCCccEEE---EcCcCccceEEECCCCCEEEE
Confidence 777765321 111111 1233456678888 6666554
No 326
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=94.37 E-value=0.89 Score=40.34 Aligned_cols=194 Identities=7% Similarity=-0.001 Sum_probs=90.1
Q ss_pred CCCEEEEEECC----CcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCC------CeEEEEeCCCCce
Q psy4571 115 HESLFGSVADD----QKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSAD------KTVALWDLRNLKL 184 (437)
Q Consensus 115 ~~~~l~~~~~d----g~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~d------g~i~lwd~~~~~~ 184 (437)
++.+++.|+.+ ..+.+||+.+.. ...+..+.........+.+ ++. +++.|+.+ ..+.+||..+...
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~-W~~~~~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~~~~~~d~~~~~W 130 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDS-WYSKLGPPTPRDSLAACAA--EGK-IYTSGGSEVGNSALYLFECYDTRTESW 130 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTE-EEEEECCSSCCBSCEEEEE--TTE-EEEECCBBTTBSCCCCEEEEETTTTEE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCe-EEECCCCCccccceeEEEE--CCE-EEEECCCCCCCcEeeeEEEEeCCCCce
Confidence 45677777654 568888887431 1222222111111222222 344 67777765 4588999987553
Q ss_pred eee-EeccCCCceEEEEEcCCCCcEEEEEeC---------CCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEE
Q psy4571 185 KLH-SFESHKDEIFQVQWSPHNETILASSGT---------DRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKIS 254 (437)
Q Consensus 185 ~~~-~~~~h~~~v~~v~~~p~~~~~l~sg~~---------dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 254 (437)
... .+......-..+.+ ++. +++.|+. -..+.+||+.+..-.... ..+. ....| .
T Consensus 131 ~~~~~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~----~~p~----~r~~~----~ 195 (306)
T 3ii7_A 131 HTKPSMLTQRCSHGMVEA--NGL-IYVCGGSLGNNVSGRVLNSCEVYDPATETWTELC----PMIE----ARKNH----G 195 (306)
T ss_dssp EEECCCSSCCBSCEEEEE--TTE-EEEECCEESCTTTCEECCCEEEEETTTTEEEEEC----CCSS----CCBSC----E
T ss_pred EeCCCCcCCcceeEEEEE--CCE-EEEECCCCCCCCcccccceEEEeCCCCCeEEECC----Cccc----hhhcc----e
Confidence 111 11111111122222 443 6777653 244888998775321110 0000 01122 1
Q ss_pred EEEEccCCCeEEEEEeCC-----CeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCccccccccccc
Q psy4571 255 DFSWNPNEPWVICSVSED-----NIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQ 329 (437)
Q Consensus 255 ~l~~~p~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~ 329 (437)
.+.+ ++. +++.|+.+ ..+.+||+.+.+-...-... ....... +..-++++++.|+.++.. ...
T Consensus 196 ~~~~--~~~-i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p--~~r~~~~-~~~~~~~i~v~GG~~~~~------~~~ 263 (306)
T 3ii7_A 196 LVFV--KDK-IFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMP--WKGVTVK-CAAVGSIVYVLAGFQGVG------RLG 263 (306)
T ss_dssp EEEE--TTE-EEEECCEETTEEBCCEEEEETTTTEEEECCCCS--CCBSCCE-EEEETTEEEEEECBCSSS------BCC
T ss_pred EEEE--CCE-EEEEeCCCCCCCCceEEEeeCCCCcEEECCCCC--CCcccee-EEEECCEEEEEeCcCCCe------eee
Confidence 2222 444 77777643 46889998876322111111 1111111 222367777777755331 112
Q ss_pred ccccccchhh
Q psy4571 330 GLVLFDILVC 339 (437)
Q Consensus 330 ~i~~wd~~~~ 339 (437)
.+.++|..+.
T Consensus 264 ~~~~yd~~~~ 273 (306)
T 3ii7_A 264 HILEYNTETD 273 (306)
T ss_dssp EEEEEETTTT
T ss_pred eEEEEcCCCC
Confidence 2566676554
No 327
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=94.08 E-value=0.42 Score=42.42 Aligned_cols=194 Identities=7% Similarity=0.038 Sum_probs=90.1
Q ss_pred CCCEEEEEECC-----CcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCC-----eEEEEeCCCCce
Q psy4571 115 HESLFGSVADD-----QKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADK-----TVALWDLRNLKL 184 (437)
Q Consensus 115 ~~~~l~~~~~d-----g~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg-----~i~lwd~~~~~~ 184 (437)
++.+++.|+.+ ..+.+||+.+.. ...+..+.........+.+ ++. +++.|+.++ .+.+||+.+.+.
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~-W~~~~~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~~~~~d~~~~~W 136 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQ-WTSVANMRDRRSTLGAAVL--NGL-LYAVGGFDGSTGLSSVEAYNIKSNEW 136 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTE-EEEECCCSSCCBSCEEEEE--TTE-EEEEEEECSSCEEEEEEEEETTTTEE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCc-eeeCCCCCccccceEEEEE--CCE-EEEEcCCCCCccCceEEEEeCCCCeE
Confidence 45677777654 357888887431 1122111111111222222 344 677777653 577889887553
Q ss_pred eee-EeccCCCceEEEEEcCCCCcEEEEEeCC-------CeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEE
Q psy4571 185 KLH-SFESHKDEIFQVQWSPHNETILASSGTD-------RRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDF 256 (437)
Q Consensus 185 ~~~-~~~~h~~~v~~v~~~p~~~~~l~sg~~d-------g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l 256 (437)
... .+.........+.+ ++. +++.|+.+ ..+.+||+.+..-.... ..+ .....| ..+
T Consensus 137 ~~~~~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~----~~p----~~r~~~----~~~ 201 (302)
T 2xn4_A 137 FHVAPMNTRRSSVGVGVV--GGL-LYAVGGYDVASRQCLSTVECYNATTNEWTYIA----EMS----TRRSGA----GVG 201 (302)
T ss_dssp EEECCCSSCCBSCEEEEE--TTE-EEEECCEETTTTEECCCEEEEETTTTEEEEEC----CCS----SCCBSC----EEE
T ss_pred eecCCCCCcccCceEEEE--CCE-EEEEeCCCCCCCccccEEEEEeCCCCcEEECC----CCc----cccccc----cEE
Confidence 111 11111111122222 343 67777643 34888998765321110 000 001122 222
Q ss_pred EEccCCCeEEEEEeCC-----CeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCccccccccccccc
Q psy4571 257 SWNPNEPWVICSVSED-----NIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGL 331 (437)
Q Consensus 257 ~~~p~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i 331 (437)
.+ ++. +++.|+.+ ..+.+||+.+.+-...-... .......+...++++++.|+.++.. ....+
T Consensus 202 ~~--~~~-iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~---~~r~~~~~~~~~~~i~v~GG~~~~~------~~~~v 269 (302)
T 2xn4_A 202 VL--NNL-LYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMN---MCRRNAGVCAVNGLLYVVGGDDGSC------NLASV 269 (302)
T ss_dssp EE--TTE-EEEECCBSSSSBCCCEEEEETTTTEEEEECCCS---SCCBSCEEEEETTEEEEECCBCSSS------BCCCE
T ss_pred EE--CCE-EEEECCCCCCcccceEEEEeCCCCCEeeCCCCC---CccccCeEEEECCEEEEECCcCCCc------ccccE
Confidence 22 454 77777754 46889999876332211111 1111112333467777777755431 11225
Q ss_pred ccccchhh
Q psy4571 332 VLFDILVC 339 (437)
Q Consensus 332 ~~wd~~~~ 339 (437)
.++|..+.
T Consensus 270 ~~yd~~~~ 277 (302)
T 2xn4_A 270 EYYNPTTD 277 (302)
T ss_dssp EEEETTTT
T ss_pred EEEcCCCC
Confidence 66666554
No 328
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=94.00 E-value=1.2 Score=39.64 Aligned_cols=194 Identities=11% Similarity=0.087 Sum_probs=89.9
Q ss_pred CCCEEEEEEC----C-----CcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCC-----CeEEEEeCC
Q psy4571 115 HESLFGSVAD----D-----QKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSAD-----KTVALWDLR 180 (437)
Q Consensus 115 ~~~~l~~~~~----d-----g~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~d-----g~i~lwd~~ 180 (437)
++.+++.|+. + ..+.+||+.+.. ...+..+.........+.+ ++. +++.|+.+ ..+.+||..
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~-W~~~~~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~~~~yd~~ 145 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQ-WSPCAPMSVPRNRIGVGVI--DGH-IYAVGGSHGCIHHNSVERYEPE 145 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTE-EEECCCCSSCCBTCEEEEE--TTE-EEEECCEETTEECCCEEEEETT
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCe-EeECCCCCcCccccEEEEE--CCE-EEEEcCCCCCcccccEEEECCC
Confidence 4556666654 2 467888887431 1111111111111222222 344 67776643 358889988
Q ss_pred CCceeee-EeccCCCceEEEEEcCCCCcEEEEEeCC-----CeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEE
Q psy4571 181 NLKLKLH-SFESHKDEIFQVQWSPHNETILASSGTD-----RRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKIS 254 (437)
Q Consensus 181 ~~~~~~~-~~~~h~~~v~~v~~~p~~~~~l~sg~~d-----g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 254 (437)
+.+.... .+......-..+.+ ++ .+++.|+.+ ..+.+||+.+..-.... ..+. ....| .
T Consensus 146 ~~~W~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~----~~p~----~r~~~----~ 210 (308)
T 1zgk_A 146 RDEWHLVAPMLTRRIGVGVAVL--NR-LLYAVGGFDGTNRLNSAECYYPERNEWRMIT----AMNT----IRSGA----G 210 (308)
T ss_dssp TTEEEECCCCSSCCBSCEEEEE--TT-EEEEECCBCSSCBCCCEEEEETTTTEEEECC----CCSS----CCBSC----E
T ss_pred CCeEeECCCCCccccceEEEEE--CC-EEEEEeCCCCCCcCceEEEEeCCCCeEeeCC----CCCC----ccccc----e
Confidence 7543111 11111111122222 34 467777654 35888988765321110 0000 01122 2
Q ss_pred EEEEccCCCeEEEEEeCC-----CeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCccccccccccc
Q psy4571 255 DFSWNPNEPWVICSVSED-----NIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQ 329 (437)
Q Consensus 255 ~l~~~p~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~ 329 (437)
.+.+ ++. +++.|+.+ ..+.+||+.+.+-...-... ....... +..-++++++.|+.++.. ...
T Consensus 211 ~~~~--~~~-iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p--~~r~~~~-~~~~~~~i~v~GG~~~~~------~~~ 278 (308)
T 1zgk_A 211 VCVL--HNC-IYAAGGYDGQDQLNSVERYDVETETWTFVAPMK--HRRSALG-ITVHQGRIYVLGGYDGHT------FLD 278 (308)
T ss_dssp EEEE--TTE-EEEECCBCSSSBCCCEEEEETTTTEEEECCCCS--SCCBSCE-EEEETTEEEEECCBCSSC------BCC
T ss_pred EEEE--CCE-EEEEeCCCCCCccceEEEEeCCCCcEEECCCCC--CCccceE-EEEECCEEEEEcCcCCCc------ccc
Confidence 2222 454 77777764 56899999876322211111 1111112 223367777777755421 122
Q ss_pred ccccccchhh
Q psy4571 330 GLVLFDILVC 339 (437)
Q Consensus 330 ~i~~wd~~~~ 339 (437)
.+.++|..+.
T Consensus 279 ~v~~yd~~~~ 288 (308)
T 1zgk_A 279 SVECYDPDTD 288 (308)
T ss_dssp EEEEEETTTT
T ss_pred eEEEEcCCCC
Confidence 2566776554
No 329
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=93.47 E-value=1.1 Score=39.69 Aligned_cols=194 Identities=13% Similarity=0.047 Sum_probs=89.8
Q ss_pred CCCEEEEEE-CC-----CcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCC-----CeEEEEeCCCCc
Q psy4571 115 HESLFGSVA-DD-----QKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSAD-----KTVALWDLRNLK 183 (437)
Q Consensus 115 ~~~~l~~~~-~d-----g~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~d-----g~i~lwd~~~~~ 183 (437)
++.+++.|+ .+ ..+.+||+.+.. ...+..+.........+. -++. +++.|+.+ ..+.++|..+..
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~-W~~~~~~p~~r~~~~~~~--~~~~-l~v~GG~~~~~~~~~~~~~d~~~~~ 89 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQE-WSFLPSITRKRRYVASVS--LHDR-IYVIGGYDGRSRLSSVECLDYTADE 89 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTE-EEECCCCSSCCBSCEEEE--ETTE-EEEECCBCSSCBCCCEEEEETTCCT
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCe-EEeCCCCChhhccccEEE--ECCE-EEEEcCCCCCccCceEEEEECCCCC
Confidence 345666665 22 367888887431 111111111111112222 2344 67777755 458899998765
Q ss_pred ---ee-eeEeccCCCceEEEEEcCCCCcEEEEEeCC-----CeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEE
Q psy4571 184 ---LK-LHSFESHKDEIFQVQWSPHNETILASSGTD-----RRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKIS 254 (437)
Q Consensus 184 ---~~-~~~~~~h~~~v~~v~~~p~~~~~l~sg~~d-----g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 254 (437)
.. +..+......-..+.+ ++. +++.|+.+ ..+.+||+.+..-.. +.........-.
T Consensus 90 ~~~W~~~~~~p~~r~~~~~~~~--~~~-lyv~GG~~~~~~~~~~~~~d~~~~~W~~------------~~~~p~~r~~~~ 154 (301)
T 2vpj_A 90 DGVWYSVAPMNVRRGLAGATTL--GDM-IYVSGGFDGSRRHTSMERYDPNIDQWSM------------LGDMQTAREGAG 154 (301)
T ss_dssp TCCCEEECCCSSCCBSCEEEEE--TTE-EEEECCBCSSCBCCEEEEEETTTTEEEE------------EEECSSCCBSCE
T ss_pred CCeeEECCCCCCCccceeEEEE--CCE-EEEEcccCCCcccceEEEEcCCCCeEEE------------CCCCCCCcccce
Confidence 31 1111111111122222 444 67777654 358888887643211 111111111111
Q ss_pred EEEEccCCCeEEEEEeCC-----CeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCccccccccccc
Q psy4571 255 DFSWNPNEPWVICSVSED-----NIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQ 329 (437)
Q Consensus 255 ~l~~~p~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~ 329 (437)
.+.+ ++. +++.|+.+ ..+.+||+.+.+-...-.. ........+...++++++.|+.++... ..
T Consensus 155 ~~~~--~~~-iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~---p~~r~~~~~~~~~~~i~v~GG~~~~~~------~~ 222 (301)
T 2vpj_A 155 LVVA--SGV-IYCLGGYDGLNILNSVEKYDPHTGHWTNVTPM---ATKRSGAGVALLNDHIYVVGGFDGTAH------LS 222 (301)
T ss_dssp EEEE--TTE-EEEECCBCSSCBCCCEEEEETTTTEEEEECCC---SSCCBSCEEEEETTEEEEECCBCSSSB------CC
T ss_pred EEEE--CCE-EEEECCCCCCcccceEEEEeCCCCcEEeCCCC---CcccccceEEEECCEEEEEeCCCCCcc------cc
Confidence 2222 455 77777654 4588999887633221111 111111123334677777776554311 22
Q ss_pred ccccccchhh
Q psy4571 330 GLVLFDILVC 339 (437)
Q Consensus 330 ~i~~wd~~~~ 339 (437)
.+.++|..+.
T Consensus 223 ~v~~yd~~~~ 232 (301)
T 2vpj_A 223 SVEAYNIRTD 232 (301)
T ss_dssp CEEEEETTTT
T ss_pred eEEEEeCCCC
Confidence 2566776654
No 330
>1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A
Probab=92.74 E-value=0.14 Score=37.76 Aligned_cols=51 Identities=29% Similarity=0.567 Sum_probs=44.1
Q ss_pred ccccCHHHHHHHHHhhhccccccccCCCCcccccHHHHHHHHHhcCCChHhhhccccc
Q psy4571 368 IWSMTDEQREYYKTQFHNLQRHKSVSDPSYHLISGQVARKFFENSKLPVTELRKIWYP 425 (437)
Q Consensus 368 ~w~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~s~~p~~~~~~~w~~ 425 (437)
-|.++.++...+...|..+.. . -|.|++...+.++..+++|-.++.+||..
T Consensus 6 ~w~ls~~e~~~~~~~F~~~D~-~------dG~Is~~el~~~l~~~gl~~~el~~i~~~ 56 (106)
T 1eh2_A 6 PWAVKPEDKAKYDAIFDSLSP-V------NGFLSGDKVKPVLLNSKLPVDILGRVWEL 56 (106)
T ss_dssp CCSSCHHHHHHHHHHHTTSCC-S------SSCCBHHHHHHHHHTTTCCHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhCC-C------CCeEcHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 488888888889999988774 3 38999999999999999999999999963
No 331
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=91.63 E-value=0.2 Score=48.19 Aligned_cols=119 Identities=6% Similarity=0.025 Sum_probs=70.1
Q ss_pred CceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCC
Q psy4571 194 DEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273 (437)
Q Consensus 194 ~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg 273 (437)
.....+..+|||++++++|-.+.++.|+|++.......-. ...+...+.....-.-.....+|.++|. ...|---|.
T Consensus 323 ksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k--~~~~~~~~~ae~e~GlGPlHt~Fd~~G~-aYTtlfidS 399 (638)
T 3sbq_A 323 KNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGK--LADPRDVIVGEPELGLGPLHTTFDGRGN-AYTTLFIDS 399 (638)
T ss_dssp SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTC--CSCGGGGEEECCBCCSCEEEEEECSSSE-EEEEETTTT
T ss_pred CCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhcc--ccCcccceEeeccCCCcccEEEECCCCc-eEeeeeecc
Confidence 3446789999999988888889999999998532110000 0000111111111233467789999995 666777999
Q ss_pred eEEEEeCCCC------CC----ceeeeeee--cccCCceeeeecCCCCcccccC
Q psy4571 274 IMQEYCDSTD------SD----TKTMRLDS--IRSNGGISSTASPTASSTASES 315 (437)
Q Consensus 274 ~i~iwd~~~~------~~----~~~~~~~~--~~~~~~~~~~~s~~g~~l~s~s 315 (437)
.|.-|++... +. +..+..+- .|......-.-.|||++|++..
T Consensus 400 qvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~ln 453 (638)
T 3sbq_A 400 QVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALS 453 (638)
T ss_dssp EEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEE
T ss_pred eEEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEec
Confidence 9999998753 22 22222211 1111111125578999988874
No 332
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=91.44 E-value=6.9 Score=34.30 Aligned_cols=106 Identities=14% Similarity=0.161 Sum_probs=52.8
Q ss_pred CCCEEEEEECCC-----cEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCC-------CeEEEEeCCCC
Q psy4571 115 HESLFGSVADDQ-----KLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSAD-------KTVALWDLRNL 182 (437)
Q Consensus 115 ~~~~l~~~~~dg-----~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~d-------g~i~lwd~~~~ 182 (437)
++.+++.|+.++ .+.+||+.+.. ...+..+.........+.+ ++. +++.|+.+ ..+.+||+.+.
T Consensus 108 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~-W~~~~~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~~~~~~yd~~~~ 183 (302)
T 2xn4_A 108 NGLLYAVGGFDGSTGLSSVEAYNIKSNE-WFHVAPMNTRRSSVGVGVV--GGL-LYAVGGYDVASRQCLSTVECYNATTN 183 (302)
T ss_dssp TTEEEEEEEECSSCEEEEEEEEETTTTE-EEEECCCSSCCBSCEEEEE--TTE-EEEECCEETTTTEECCCEEEEETTTT
T ss_pred CCEEEEEcCCCCCccCceEEEEeCCCCe-EeecCCCCCcccCceEEEE--CCE-EEEEeCCCCCCCccccEEEEEeCCCC
Confidence 467777777653 57788887431 1122111111111222222 344 66766542 35889999875
Q ss_pred ceeee-EeccCCCceEEEEEcCCCCcEEEEEeCC-----CeEEEEEcCCCC
Q psy4571 183 KLKLH-SFESHKDEIFQVQWSPHNETILASSGTD-----RRLHVWDLSKIG 227 (437)
Q Consensus 183 ~~~~~-~~~~h~~~v~~v~~~p~~~~~l~sg~~d-----g~i~vwd~~~~~ 227 (437)
..... .+.........+.+ ++ .+++.|+.+ ..+.+||+.+..
T Consensus 184 ~W~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~yd~~~~~ 231 (302)
T 2xn4_A 184 EWTYIAEMSTRRSGAGVGVL--NN-LLYAVGGHDGPLVRKSVEVYDPTTNA 231 (302)
T ss_dssp EEEEECCCSSCCBSCEEEEE--TT-EEEEECCBSSSSBCCCEEEEETTTTE
T ss_pred cEEECCCCccccccccEEEE--CC-EEEEECCCCCCcccceEEEEeCCCCC
Confidence 53211 11111111122222 34 477787764 358899987653
No 333
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=91.35 E-value=2.2 Score=37.70 Aligned_cols=105 Identities=9% Similarity=0.132 Sum_probs=53.2
Q ss_pred CCEEEEEEC--CCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCC----CeEEEEeCCCCceeee-E
Q psy4571 116 ESLFGSVAD--DQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSAD----KTVALWDLRNLKLKLH-S 188 (437)
Q Consensus 116 ~~~l~~~~~--dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~d----g~i~lwd~~~~~~~~~-~ 188 (437)
+.+++.|+. ...+.+||+.+.. ...+..+.........+.+ ++. +++.|+.+ ..+.++|..+.+.... .
T Consensus 12 ~~l~~~GG~~~~~~~~~~d~~~~~-W~~~~~~p~~r~~~~~~~~--~~~-lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~ 87 (306)
T 3ii7_A 12 DYRIALFGGSQPQSCRYFNPKDYS-WTDIRCPFEKRRDAACVFW--DNV-VYILGGSQLFPIKRMDCYNVVKDSWYSKLG 87 (306)
T ss_dssp CEEEEEECCSSTTSEEEEETTTTE-EEECCCCSCCCBSCEEEEE--TTE-EEEECCBSSSBCCEEEEEETTTTEEEEEEC
T ss_pred ceEEEEeCCCCCceEEEecCCCCC-EecCCCCCcccceeEEEEE--CCE-EEEEeCCCCCCcceEEEEeCCCCeEEECCC
Confidence 456666665 3568889987432 1111111111111222222 344 67777755 6688999987553211 1
Q ss_pred eccCCCceEEEEEcCCCCcEEEEEeCC------CeEEEEEcCCCC
Q psy4571 189 FESHKDEIFQVQWSPHNETILASSGTD------RRLHVWDLSKIG 227 (437)
Q Consensus 189 ~~~h~~~v~~v~~~p~~~~~l~sg~~d------g~i~vwd~~~~~ 227 (437)
+......-..+.+ ++. +++.|+.+ ..+.+||+.+..
T Consensus 88 ~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~~~~~~d~~~~~ 129 (306)
T 3ii7_A 88 PPTPRDSLAACAA--EGK-IYTSGGSEVGNSALYLFECYDTRTES 129 (306)
T ss_dssp CSSCCBSCEEEEE--TTE-EEEECCBBTTBSCCCCEEEEETTTTE
T ss_pred CCccccceeEEEE--CCE-EEEECCCCCCCcEeeeEEEEeCCCCc
Confidence 1111111122222 444 67777765 458889987753
No 334
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=91.32 E-value=1.7 Score=38.72 Aligned_cols=128 Identities=8% Similarity=-0.020 Sum_probs=69.3
Q ss_pred EEEeCCCCcEEEEE---eCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCC
Q psy4571 155 LSFNPYSEYILATG---SADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQS 231 (437)
Q Consensus 155 l~~~~~~~~~l~sg---s~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~ 231 (437)
..|++++.++..+- .....|..-+++... ...+..+.. .+++|+++.+..+......|.+-++.....
T Consensus 109 ~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~--~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~--- 179 (302)
T 3s25_A 109 IYASLIGNYIYYLHYDTQTATSLYRIRIDGEE--KKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSE--- 179 (302)
T ss_dssp EEEEEETTEEEEEEESSSSCEEEEEEETTSCC--CEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEE---
T ss_pred cEEEEeCCEEEEEeecCCCCceEEEEECCCCC--eEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCE---
Confidence 36788888744444 234456556665422 344443332 456788887666655466788888766431
Q ss_pred CCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCC-CeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCc
Q psy4571 232 TEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED-NIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASS 310 (437)
Q Consensus 232 ~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~d-g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~ 310 (437)
+.+ ..+ ... ..+.|++.++..+-..+ ..|..-++..... ..+.. ... ..++|++..
T Consensus 180 ---------~~l--~~~---~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~-~~Lt~-----~~~--~~~~~~g~~ 236 (302)
T 3s25_A 180 ---------ALF--YDC---NCY-KPVVLDDTNVYYMDVNRDNAIVHVNINNPNP-VVLTE-----ANI--EHYNVYGSL 236 (302)
T ss_dssp ---------EEE--ECS---CEE-EEEEEETTEEEEEEGGGTTEEEEECSSSCCC-EECSC-----SCE--EEEEEETTE
T ss_pred ---------EEE--eCC---Ccc-ceeeecCCEEEEEEcCCCcEEEEEECCCCCe-EEEeC-----CCc--ceEEECCCE
Confidence 111 222 122 23569999665554333 4566666665432 22211 111 347888887
Q ss_pred cccc
Q psy4571 311 TASE 314 (437)
Q Consensus 311 l~s~ 314 (437)
|..+
T Consensus 237 Iy~~ 240 (302)
T 3s25_A 237 IFYQ 240 (302)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7654
No 335
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=91.27 E-value=8.4 Score=38.73 Aligned_cols=156 Identities=10% Similarity=0.105 Sum_probs=77.6
Q ss_pred CCCEEEEEECC----CcEEEEEcCCCCCCCCee-e-----eccCCCCeEEEEEeC-CCCcEEEEEeCCC------eEEEE
Q psy4571 115 HESLFGSVADD----QKLMIWDTRSHNVSKPSH-T-----VDAHTAEVNCLSFNP-YSEYILATGSADK------TVALW 177 (437)
Q Consensus 115 ~~~~l~~~~~d----g~v~vwd~~~~~~~~~~~-~-----~~~h~~~v~~l~~~~-~~~~~l~sgs~dg------~i~lw 177 (437)
++.+++.|+.+ ..+.+||+.+.. ...+. . ........ +++..+ ++. +++.|+.++ .+.+|
T Consensus 397 ~~~iyv~GG~~~~~~~~v~~yd~~~~~-W~~~~~~~p~~~~p~~R~~h-s~~~~~~~~~-lyv~GG~~~~~~~~~dv~~y 473 (695)
T 2zwa_A 397 GNDVFYMGGSNPYRVNEILQLSIHYDK-IDMKNIEVSSSEVPVARMCH-TFTTISRNNQ-LLLIGGRKAPHQGLSDNWIF 473 (695)
T ss_dssp SSCEEEECCBSSSBCCCEEEEEECSSC-EEEEECCCCCSCCCCCCBSC-EEEEETTTTE-EEEECCBSSTTCBCCCCEEE
T ss_pred CCEEEEECCCCCCCcCcEEEEECCCCe-EEEeccCCCCCCCCccccce-EEEEEccCCE-EEEEcCCCCCCCccccEEEE
Confidence 56777777753 468888887432 12221 1 11111112 233333 455 677777543 47888
Q ss_pred eCCCCceeee-EeccCCCceEEEEEcCCCCcEEEEEeCCC--eEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEE
Q psy4571 178 DLRNLKLKLH-SFESHKDEIFQVQWSPHNETILASSGTDR--RLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKIS 254 (437)
Q Consensus 178 d~~~~~~~~~-~~~~h~~~v~~v~~~p~~~~~l~sg~~dg--~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 254 (437)
|..+...... .+. ....-.+.+...++. +++.|+.++ .+.+||..+..-..... . + .......+| .
T Consensus 474 d~~t~~W~~~~~~p-~~R~~h~~~~~~~~~-iyv~GG~~~~~~v~~yd~~t~~W~~~~~-~--g--~~p~~r~~~----~ 542 (695)
T 2zwa_A 474 DMKTREWSMIKSLS-HTRFRHSACSLPDGN-VLILGGVTEGPAMLLYNVTEEIFKDVTP-K--D--EFFQNSLVS----A 542 (695)
T ss_dssp ETTTTEEEECCCCS-BCCBSCEEEECTTSC-EEEECCBCSSCSEEEEETTTTEEEECCC-S--S--GGGGSCCBS----C
T ss_pred eCCCCcEEECCCCC-CCcccceEEEEcCCE-EEEECCCCCCCCEEEEECCCCceEEccC-C--C--CCCCcccce----e
Confidence 9887543111 111 111112233323555 788887654 68999988753211100 0 0 000001122 2
Q ss_pred EEEEccCCCeEEEEEeC--C-----CeEEEEeCCCCC
Q psy4571 255 DFSWNPNEPWVICSVSE--D-----NIMQEYCDSTDS 284 (437)
Q Consensus 255 ~l~~~p~~~~~l~s~~~--d-----g~i~iwd~~~~~ 284 (437)
++.+..+...+++.|+. + +.+.+||+.+..
T Consensus 543 a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 543 GLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp EEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred EEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCc
Confidence 34455552337777765 2 468899998876
No 336
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=91.17 E-value=3.7 Score=36.42 Aligned_cols=129 Identities=10% Similarity=0.078 Sum_probs=71.8
Q ss_pred EEEeCCCCcEEEEEeCC-------------CeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEE---eCCCeE
Q psy4571 155 LSFNPYSEYILATGSAD-------------KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASS---GTDRRL 218 (437)
Q Consensus 155 l~~~~~~~~~l~sgs~d-------------g~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg---~~dg~i 218 (437)
--+++++.++..+...+ ..|+..+++..+. ..+.. .. ...|+|+++++..+- ..+..|
T Consensus 58 ~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~--~~l~~--~~--~~~~s~~g~~Iy~~~~~~~~~~~I 131 (302)
T 3s25_A 58 MYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGS--TVLDP--DP--CIYASLIGNYIYYLHYDTQTATSL 131 (302)
T ss_dssp EEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCC--EEEEC--SC--EEEEEEETTEEEEEEESSSSCEEE
T ss_pred eeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcc--eEeec--CC--ccEEEEeCCEEEEEeecCCCCceE
Confidence 44588899866666654 4677778776442 23322 22 236778888755554 234456
Q ss_pred EEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCC
Q psy4571 219 HVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNG 298 (437)
Q Consensus 219 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 298 (437)
..-++..... ..+..+.. .+++|+++++..+......|..-++..+... .+ .. +
T Consensus 132 y~~~~dGs~~---------------~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~-~l-~~-----~ 185 (302)
T 3s25_A 132 YRIRIDGEEK---------------KKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEA-LF-YD-----C 185 (302)
T ss_dssp EEEETTSCCC---------------EEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEE-EE-EC-----S
T ss_pred EEEECCCCCe---------------EEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEE-EE-eC-----C
Confidence 5556654321 11222222 4567888866666555778888888765432 22 11 1
Q ss_pred ceeeeecCCCCcccccC
Q psy4571 299 GISSTASPTASSTASES 315 (437)
Q Consensus 299 ~~~~~~s~~g~~l~s~s 315 (437)
.....++|++.+|+-..
T Consensus 186 ~~~~~~~P~g~~iy~t~ 202 (302)
T 3s25_A 186 NCYKPVVLDDTNVYYMD 202 (302)
T ss_dssp CEEEEEEEETTEEEEEE
T ss_pred CccceeeecCCEEEEEE
Confidence 11223568888776543
No 337
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=90.87 E-value=8.2 Score=34.16 Aligned_cols=133 Identities=11% Similarity=0.013 Sum_probs=61.9
Q ss_pred cEEEEEeCC-------CeEEEEeCCCCceeeeEeccCCCce--EEEEEcCCCCcEEEEEeCC------CeEEEEEcCCCC
Q psy4571 163 YILATGSAD-------KTVALWDLRNLKLKLHSFESHKDEI--FQVQWSPHNETILASSGTD------RRLHVWDLSKIG 227 (437)
Q Consensus 163 ~~l~sgs~d-------g~i~lwd~~~~~~~~~~~~~h~~~v--~~v~~~p~~~~~l~sg~~d------g~i~vwd~~~~~ 227 (437)
.+++.|+.+ ..+.++|..+.+.. .+.....+. .+++. .++. +++.|+.+ ..+.+||+.+..
T Consensus 111 ~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~--~~~~~p~~r~~~~~~~-~~~~-iyv~GG~~~~~~~~~~~~~yd~~~~~ 186 (318)
T 2woz_A 111 KIYVVAGKDLQTEASLDSVLCYDPVAAKWS--EVKNLPIKVYGHNVIS-HNGM-IYCLGGKTDDKKCTNRVFIYNPKKGD 186 (318)
T ss_dssp EEEEEEEEBTTTCCEEEEEEEEETTTTEEE--EECCCSSCEESCEEEE-ETTE-EEEECCEESSSCBCCCEEEEETTTTE
T ss_pred EEEEEcCccCCCCcccceEEEEeCCCCCEe--ECCCCCCcccccEEEE-ECCE-EEEEcCCCCCCCccceEEEEcCCCCE
Confidence 367777754 34788898875532 121111111 11222 3444 67777642 348899987753
Q ss_pred CCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCC-----CeEEEEeCCCCCCceeeeeeecccCCceee
Q psy4571 228 EEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED-----NIMQEYCDSTDSDTKTMRLDSIRSNGGISS 302 (437)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 302 (437)
-.... ..+ .....| ..+.+ ++. +++.|+.+ ..+.+||+.+.+-...-.. ........
T Consensus 187 W~~~~----~~p----~~r~~~----~~~~~--~~~-iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~---p~~r~~~~ 248 (318)
T 2woz_A 187 WKDLA----PMK----TPRSMF----GVAIH--KGK-IVIAGGVTEDGLSASVEAFDLKTNKWEVMTEF---PQERSSIS 248 (318)
T ss_dssp EEEEC----CCS----SCCBSC----EEEEE--TTE-EEEEEEEETTEEEEEEEEEETTTCCEEECCCC---SSCCBSCE
T ss_pred EEECC----CCC----CCcccc----eEEEE--CCE-EEEEcCcCCCCccceEEEEECCCCeEEECCCC---CCcccceE
Confidence 21110 000 001122 12222 455 67677643 3577899887643221111 11111112
Q ss_pred eecCCCCcccccCCC
Q psy4571 303 TASPTASSTASESPT 317 (437)
Q Consensus 303 ~~s~~g~~l~s~s~d 317 (437)
+...++++++.|+.+
T Consensus 249 ~~~~~~~i~v~GG~~ 263 (318)
T 2woz_A 249 LVSLAGSLYAIGGFA 263 (318)
T ss_dssp EEEETTEEEEECCBC
T ss_pred EEEECCEEEEECCee
Confidence 333466777777654
No 338
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=90.75 E-value=8.3 Score=34.06 Aligned_cols=104 Identities=11% Similarity=0.101 Sum_probs=51.7
Q ss_pred cEEEEEeCC--------CeEEEEeCCCCceeee-EeccCCCceEEEEEcCCCCcEEEEEeC-C-----CeEEEEEcCCCC
Q psy4571 163 YILATGSAD--------KTVALWDLRNLKLKLH-SFESHKDEIFQVQWSPHNETILASSGT-D-----RRLHVWDLSKIG 227 (437)
Q Consensus 163 ~~l~sgs~d--------g~i~lwd~~~~~~~~~-~~~~h~~~v~~v~~~p~~~~~l~sg~~-d-----g~i~vwd~~~~~ 227 (437)
.+++.|+.+ ..+.++|..+.+.... .+......-..+. -++. +++.|+. + ..+.+||+.+..
T Consensus 100 ~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~-iyv~GG~~~~~~~~~~~~~yd~~~~~ 176 (315)
T 4asc_A 100 SIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS--HMDL-VYVIGGKGSDRKCLNKMCVYDPKKFE 176 (315)
T ss_dssp EEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTE-EEEECCBCTTSCBCCCEEEEETTTTE
T ss_pred EEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE--ECCE-EEEEeCCCCCCcccceEEEEeCCCCe
Confidence 367777742 4588999987543111 1111111112222 2343 6777775 2 358889987653
Q ss_pred CCCCCCCCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCC-----eEEEEeCCCCC
Q psy4571 228 EEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN-----IMQEYCDSTDS 284 (437)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg-----~i~iwd~~~~~ 284 (437)
-.... ..+. ....|. ++.+ ++. +++.|+.++ .+.+||+.+.+
T Consensus 177 W~~~~----~~p~----~r~~~~----~~~~--~~~-iyv~GG~~~~~~~~~~~~yd~~~~~ 223 (315)
T 4asc_A 177 WKELA----PMQT----ARSLFG----ATVH--DGR-IIVAAGVTDTGLTSSAEVYSITDNK 223 (315)
T ss_dssp EEECC----CCSS----CCBSCE----EEEE--TTE-EEEEEEECSSSEEEEEEEEETTTTE
T ss_pred EEECC----CCCC----chhceE----EEEE--CCE-EEEEeccCCCCccceEEEEECCCCe
Confidence 21110 0000 011221 2222 455 777777654 58889988763
No 339
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=89.46 E-value=1.6 Score=39.53 Aligned_cols=111 Identities=5% Similarity=-0.030 Sum_probs=61.4
Q ss_pred CCEEEEEECCCcEEEEEcCCCCCCCCeeeeccC-CCCeEEEEE--eCCCCcEEEEE-eCCCeEEEEeCCCCceeeeEecc
Q psy4571 116 ESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAH-TAEVNCLSF--NPYSEYILATG-SADKTVALWDLRNLKLKLHSFES 191 (437)
Q Consensus 116 ~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h-~~~v~~l~~--~~~~~~~l~sg-s~dg~i~lwd~~~~~~~~~~~~~ 191 (437)
+.+++.++.||.|.-.|.++ ++..-.+... ..++....- .+.+..+++.. +.||.|..++..++.. ...+..
T Consensus 10 ~~~V~v~t~dG~l~Ald~~t---G~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~-~~~~~~ 85 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRN---GHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQ-KLPLSI 85 (339)
T ss_dssp EEEEEEEETTSCEEEEETTT---TEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEE-EEEEEH
T ss_pred CCEEEEEeCCCeEEEEECCC---CcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcE-Eeeecc
Confidence 34777889999999888873 4444444322 112221110 01122334333 6899999999887643 222211
Q ss_pred ----CCCceEE---EEE-c----CCCCcEEEEEeCCCeEEEEEcCCCCCCCC
Q psy4571 192 ----HKDEIFQ---VQW-S----PHNETILASSGTDRRLHVWDLSKIGEEQS 231 (437)
Q Consensus 192 ----h~~~v~~---v~~-~----p~~~~~l~sg~~dg~i~vwd~~~~~~~~~ 231 (437)
...++.. ... . ..+. .+++|+.+|++...|+++++...+
T Consensus 86 ~~lv~~SP~~~~~~pvv~~~~~~~~~g-~Vy~Gs~~g~l~ald~~tG~~~W~ 136 (339)
T 2be1_A 86 RQLVSTSPLHLKTNIVVNDSGKIVEDE-KVYTGSMRTIMYTINMLNGEIISA 136 (339)
T ss_dssp HHHHTTCSEEEECC----------CCE-EEEECEEEEEEEEEETTTCCEEEE
T ss_pred ccceeccccccCCCceeecccccccCC-EEEEEecCCEEEEEECCCCcEEEE
Confidence 1122221 000 0 0233 578999999999999999876544
No 340
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=87.74 E-value=4.5 Score=35.83 Aligned_cols=189 Identities=12% Similarity=0.095 Sum_probs=85.9
Q ss_pred EEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeC-----C------CeEEEEeCCCCceee
Q psy4571 118 LFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSA-----D------KTVALWDLRNLKLKL 186 (437)
Q Consensus 118 ~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~-----d------g~i~lwd~~~~~~~~ 186 (437)
+++.|+ ..+.+||+.+.. .. ...+..............++. +++.|+. . ..+..||..+.+.
T Consensus 7 l~~~GG--~~~~~yd~~~~~-W~-~~~~~~p~~r~~~~~~~~~~~-iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W-- 79 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANE-CY-CASLSSQVPKNHVSLVTKENQ-VFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEW-- 79 (315)
T ss_dssp EEEEET--TEEEEEETTTTE-EE-EEECCCCSCSSEEEEECTTCC-EEEEEEEEECSSCSSSCEEEEEEEEETTTTEE--
T ss_pred EEEEcC--CceEEECCCCCe-Ee-cCCCCCCCCccceEEEEECCE-EEEEcCcccCCCCCccccccceEEecCCCCeE--
Confidence 444555 568899988542 11 122221112222233334455 6777773 1 1277888887543
Q ss_pred eEeccCCCce--EEEEEcCCCCcEEEEEeCC--------CeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEE
Q psy4571 187 HSFESHKDEI--FQVQWSPHNETILASSGTD--------RRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDF 256 (437)
Q Consensus 187 ~~~~~h~~~v--~~v~~~p~~~~~l~sg~~d--------g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l 256 (437)
..+.....+- .+++.. ++ .+++.|+.+ ..+.+||+.+..-.... ..+. ...+|. .+
T Consensus 80 ~~~~~~p~~r~~~~~~~~-~~-~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~----~~p~----~r~~~~----~~ 145 (315)
T 4asc_A 80 LGMPPLPSPRCLFGLGEA-LN-SIYVVGGREIKDGERCLDSVMCYDRLSFKWGESD----PLPY----VVYGHT----VL 145 (315)
T ss_dssp EECCCBSSCEESCEEEEE-TT-EEEEECCEESSTTCCBCCCEEEEETTTTEEEECC----CCSS----CCBSCE----EE
T ss_pred EECCCCCcchhceeEEEE-CC-EEEEEeCCcCCCCCcccceEEEECCCCCcEeECC----CCCC----ccccee----EE
Confidence 1221111111 112222 34 467777742 34888998765321110 0000 011221 12
Q ss_pred EEccCCCeEEEEEeC------CCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccc
Q psy4571 257 SWNPNEPWVICSVSE------DNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQG 330 (437)
Q Consensus 257 ~~~p~~~~~l~s~~~------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~ 330 (437)
. .++. +++.|+. -..+.+||+.+.+-...-.. ........+..-++++++.|+.++.. ....
T Consensus 146 ~--~~~~-iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~---p~~r~~~~~~~~~~~iyv~GG~~~~~------~~~~ 213 (315)
T 4asc_A 146 S--HMDL-VYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPM---QTARSLFGATVHDGRIIVAAGVTDTG------LTSS 213 (315)
T ss_dssp E--ETTE-EEEECCBCTTSCBCCCEEEEETTTTEEEECCCC---SSCCBSCEEEEETTEEEEEEEECSSS------EEEE
T ss_pred E--ECCE-EEEEeCCCCCCcccceEEEEeCCCCeEEECCCC---CCchhceEEEEECCEEEEEeccCCCC------ccce
Confidence 2 2455 7777765 24688999887632211111 11111112233366777776654321 1122
Q ss_pred cccccchhh
Q psy4571 331 LVLFDILVC 339 (437)
Q Consensus 331 i~~wd~~~~ 339 (437)
+.++|..+.
T Consensus 214 ~~~yd~~~~ 222 (315)
T 4asc_A 214 AEVYSITDN 222 (315)
T ss_dssp EEEEETTTT
T ss_pred EEEEECCCC
Confidence 556666554
No 341
>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6
Probab=87.48 E-value=0.59 Score=33.10 Aligned_cols=51 Identities=47% Similarity=0.905 Sum_probs=43.2
Q ss_pred cccCHHHHHHHHHhhhccccccccCCCCcccccHHHHHHHHHhcCCChHhhhccccc
Q psy4571 369 WSMTDEQREYYKTQFHNLQRHKSVSDPSYHLISGQVARKFFENSKLPVTELRKIWYP 425 (437)
Q Consensus 369 w~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~s~~p~~~~~~~w~~ 425 (437)
|.++.++...+...|..+..+.+ |.|+....+.++...+++-.++.++|..
T Consensus 1 w~ls~~~~~~~~~~F~~~D~d~d------G~I~~~el~~~l~~~g~~~~~~~~i~~~ 51 (92)
T 1fi6_A 1 WKITDEQRQYYVNQFKTIQPDLN------GFIPGSAAKEFFTKSKLPILELSHIWEL 51 (92)
T ss_dssp CCCCHHHHHHHHHHHTTTCCSTT------CEEEHHHHHHHHHHHSSCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHCCCCC------CcCcHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 77888888888899988775433 8999999999999999999999999964
No 342
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=86.99 E-value=14 Score=32.52 Aligned_cols=106 Identities=10% Similarity=0.149 Sum_probs=53.2
Q ss_pred CCCEEEEEECC-----CcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCC-----CeEEEEeCCCCce
Q psy4571 115 HESLFGSVADD-----QKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSAD-----KTVALWDLRNLKL 184 (437)
Q Consensus 115 ~~~~l~~~~~d-----g~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~d-----g~i~lwd~~~~~~ 184 (437)
++.+++.|+.+ ..+.+||+.+.. ...+..+.........+.+ ++. +++.|+.+ ..+..+|+.+...
T Consensus 121 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~-W~~~~~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~~~~yd~~~~~W 196 (308)
T 1zgk_A 121 DGHIYAVGGSHGCIHHNSVERYEPERDE-WHLVAPMLTRRIGVGVAVL--NRL-LYAVGGFDGTNRLNSAECYYPERNEW 196 (308)
T ss_dssp TTEEEEECCEETTEECCCEEEEETTTTE-EEECCCCSSCCBSCEEEEE--TTE-EEEECCBCSSCBCCCEEEEETTTTEE
T ss_pred CCEEEEEcCCCCCcccccEEEECCCCCe-EeECCCCCccccceEEEEE--CCE-EEEEeCCCCCCcCceEEEEeCCCCeE
Confidence 45677776643 357888887431 1111111111111222222 344 67777654 4588999887543
Q ss_pred eee-EeccCCCceEEEEEcCCCCcEEEEEeCC-----CeEEEEEcCCCC
Q psy4571 185 KLH-SFESHKDEIFQVQWSPHNETILASSGTD-----RRLHVWDLSKIG 227 (437)
Q Consensus 185 ~~~-~~~~h~~~v~~v~~~p~~~~~l~sg~~d-----g~i~vwd~~~~~ 227 (437)
... .+......-..+.+ ++ .+++.|+.+ ..+.+||+.+..
T Consensus 197 ~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~v~~yd~~~~~ 242 (308)
T 1zgk_A 197 RMITAMNTIRSGAGVCVL--HN-CIYAAGGYDGQDQLNSVERYDVETET 242 (308)
T ss_dssp EECCCCSSCCBSCEEEEE--TT-EEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred eeCCCCCCccccceEEEE--CC-EEEEEeCCCCCCccceEEEEeCCCCc
Confidence 111 11111111122223 34 477777764 458899987753
No 343
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=86.39 E-value=2.4 Score=38.39 Aligned_cols=61 Identities=10% Similarity=-0.106 Sum_probs=28.0
Q ss_pred eEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCcccccCCCCcccccccccccccccccchhhhhh
Q psy4571 274 IMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQ 342 (437)
Q Consensus 274 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~~~~~ 342 (437)
.+.+||+.+.+-...-... .......+...++++++.|+.+..-.. ...+.+.++.+++.+
T Consensus 286 ~~~~yd~~~~~W~~~~~~p---~~r~~~~~~~~~~~i~v~GG~~~~~~~-----~~~v~~l~~~~~~~~ 346 (357)
T 2uvk_A 286 STDIHLWHNGKWDKSGELS---QGRAYGVSLPWNNSLLIIGGETAGGKA-----VTDSVLITVKDNKVT 346 (357)
T ss_dssp CCEEEECC---CEEEEECS---SCCBSSEEEEETTEEEEEEEECGGGCE-----EEEEEEEEC-CCSCE
T ss_pred eEEEEecCCCceeeCCCCC---CCcccceeEEeCCEEEEEeeeCCCCCE-----eeeEEEEEEcCcEeE
Confidence 5778999876543322111 111112234457787777775543211 122555566665543
No 344
>1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6
Probab=86.35 E-value=0.63 Score=33.21 Aligned_cols=51 Identities=25% Similarity=0.534 Sum_probs=42.6
Q ss_pred cccCHHHHHHHHHhhhccccccccCCCCcccccHHHHHHHHHhcCCChHhhhccccc
Q psy4571 369 WSMTDEQREYYKTQFHNLQRHKSVSDPSYHLISGQVARKFFENSKLPVTELRKIWYP 425 (437)
Q Consensus 369 w~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~s~~p~~~~~~~w~~ 425 (437)
|.++.++...+...|..+..+.+ |.|+....+.++...+++-.++.++|..
T Consensus 2 w~ls~~~~~~~~~~F~~~D~d~d------G~I~~~el~~~l~~~g~~~~~~~~i~~~ 52 (95)
T 1c07_A 2 WVVSPAEKAKYDEIFLKTDKDMD------GFVSGLEVREIFLKTGLPSTLLAHIWSL 52 (95)
T ss_dssp CSSCSHHHHHHHHHHHHHCTTCS------SEECHHHHHHHHHTTTCCHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHHhCCCCC------CcEeHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 66777777778888988775433 8999999999999999999999999964
No 345
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=85.92 E-value=20 Score=32.44 Aligned_cols=251 Identities=10% Similarity=0.010 Sum_probs=120.8
Q ss_pred eeEEEEeeCCCcceEEEeeccCceEeeecCCCceeEEEecCCCCeEEEecCceEEEEEeeeccccccCCCcceEEeeCC-
Q psy4571 36 RFYRLCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHLL- 114 (437)
Q Consensus 36 ~v~~~~~~~~~~~~l~tgs~d~~v~iw~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~sp~- 114 (437)
....++|. |++.++++-...+.|++++..++....+.-.+. +.+ .-......|+++|+
T Consensus 33 ~P~~ia~~-pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~---v~~-----------------~g~~GllGia~~Pdf 91 (347)
T 3das_A 33 SPWGLAPL-PGGDLLVSSRDEATITRVDAKTGRKTELGEVPG---VSP-----------------SGEGGLLGIALSPDY 91 (347)
T ss_dssp SEEEEEEC-TTSCEEEEETTTCEEEEECTTTCCEEEEEECTT---CCC-----------------BTTBSEEEEEECTTH
T ss_pred CceEEEEc-CCCcEEEEEecCCEEEEEECCCCcEeeecccCc---eee-----------------cCCCCceeeEecccc
Confidence 34567788 888777666557777777654443322111110 000 01134568999984
Q ss_pred --CCCEEEEEE--CCCcEEEEEcCCCC-----CCCC--e-eeec---cCCCCeEEEEEeCCCCcEEEEEeC---------
Q psy4571 115 --HESLFGSVA--DDQKLMIWDTRSHN-----VSKP--S-HTVD---AHTAEVNCLSFNPYSEYILATGSA--------- 170 (437)
Q Consensus 115 --~~~~l~~~~--~dg~v~vwd~~~~~-----~~~~--~-~~~~---~h~~~v~~l~~~~~~~~~l~sgs~--------- 170 (437)
++.++++-+ .++.|.-|.+.... .... + ..+. .|. -..|+|.|+|. +.++.+.
T Consensus 92 ~~~g~lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~--g~~l~fgpDG~-Lyvt~Gd~~~~~~~qd 168 (347)
T 3das_A 92 ASDHMVYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHN--GGRIAFGPDKM-LYAGTGESGDTGLSQD 168 (347)
T ss_dssp HHHCEEEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCC--CCCEEECTTSC-EEEECBCTTCGGGTTC
T ss_pred ccCCEEEEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCcc--CccccCCCCCC-EEEEECCCCCCccccC
Confidence 344444322 34556666665311 1111 1 1121 232 45799999997 5665432
Q ss_pred ----CCeEEEEeCCCC--------ceeeeEeccCCCceEEEEEcCCCCcEEEEE-eCCCeEEEEEcCCCCCC---C-CCC
Q psy4571 171 ----DKTVALWDLRNL--------KLKLHSFESHKDEIFQVQWSPHNETILASS-GTDRRLHVWDLSKIGEE---Q-STE 233 (437)
Q Consensus 171 ----dg~i~lwd~~~~--------~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg-~~dg~i~vwd~~~~~~~---~-~~~ 233 (437)
.|.|.-.+.+.. ...+ .-.+|.+ ...++|+|+|. ++++- +.|+.=.|--+..+... . .-.
T Consensus 169 ~~~~~G~IlRi~~dG~ip~~nPf~~~~i-~a~G~RN-p~Gla~dp~G~-L~~~d~g~~~~deln~i~~G~nyGwP~~~g~ 245 (347)
T 3das_A 169 RKSLGGKILRMTPDGEPAPGNPFPGSPV-YSYGHRN-VQGLAWDDKQR-LFASEFGQDTWDELNAIKPGDNYGWPEAEGK 245 (347)
T ss_dssp TTCSTTCEEEECTTSSBCTTCSSTTCCE-EEBCCSB-CCEEEECTTCC-EEEEECCSSSCEEEEEECTTCBCCTTTCCSS
T ss_pred CCCCCCEEEEEeCCCCccCCCCCCCCeE-EeeCCCC-cceEEECCCCC-EEEEecCCCCCceeeEEcCCCEecCCcccCC
Confidence 344544455431 1111 1224543 46899999876 44433 23332333333333221 0 000
Q ss_pred CCCCCCCceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCcee-eeeeecccCCceeeeecCCCCccc
Q psy4571 234 DAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKT-MRLDSIRSNGGISSTASPTASSTA 312 (437)
Q Consensus 234 ~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~s~~g~~l~ 312 (437)
.....-..++..+..+......++|.. |. +++..-..+.|....+........ -..-.........++..|||.+++
T Consensus 246 ~~~~~~~~P~~~~~~~~~ap~G~~~~~-g~-~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~lyv 323 (347)
T 3das_A 246 GGGSGFHDPVAQWSTDEASPSGIAYAE-GS-VWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKLWL 323 (347)
T ss_dssp CCCTTCCCCSEEECTTTCCEEEEEEET-TE-EEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEEEE
T ss_pred CCCccccCCcEecCCCCCCCcceEEEc-Cc-eeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCcEEE
Confidence 000111123334443334667788863 44 666665666676666665432111 111111123456678899998766
Q ss_pred ccC
Q psy4571 313 SES 315 (437)
Q Consensus 313 s~s 315 (437)
+.+
T Consensus 324 ~td 326 (347)
T 3das_A 324 VTS 326 (347)
T ss_dssp EEC
T ss_pred EEc
Confidence 644
No 346
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=85.68 E-value=6.9 Score=34.67 Aligned_cols=145 Identities=11% Similarity=0.067 Sum_probs=66.0
Q ss_pred CEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeC----CC-------eEEEEeCCCCcee
Q psy4571 117 SLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSA----DK-------TVALWDLRNLKLK 185 (437)
Q Consensus 117 ~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~----dg-------~i~lwd~~~~~~~ 185 (437)
.+++.|+. .+..||+.+.. ... ..+..............++. +++.|+. ++ .+..+|..+.+..
T Consensus 17 ~i~~~GG~--~~~~yd~~~~~-W~~-~~~~~~~~r~~~~~~~~~~~-lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~ 91 (318)
T 2woz_A 17 LILLVNDT--AAVAYDPMENE-CYL-TALAEQIPRNHSSIVTQQNQ-VYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWV 91 (318)
T ss_dssp EEEEECSS--EEEEEETTTTE-EEE-EEECTTSCSSEEEEECSSSC-EEEEESSCC-------CCCBEEEEEETTTTEEE
T ss_pred hhhhcccc--ceEEECCCCCc-eec-ccCCccCCccceEEEEECCE-EEEECCcccCccccCCCccccEEEEeCCCCcEE
Confidence 34444443 37888887432 111 11211111222222334444 6777773 12 2778888875431
Q ss_pred ee-EeccCCCceEEEEEcCCCCcEEEEEeCC-------CeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEE
Q psy4571 186 LH-SFESHKDEIFQVQWSPHNETILASSGTD-------RRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFS 257 (437)
Q Consensus 186 ~~-~~~~h~~~v~~v~~~p~~~~~l~sg~~d-------g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~ 257 (437)
.. .+......-..+.+ ++ .+++.|+.+ ..+.+||+.+..-.... ..+.. ..+|. .+.
T Consensus 92 ~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~----~~p~~----r~~~~----~~~ 156 (318)
T 2woz_A 92 GLPPLPSARCLFGLGEV--DD-KIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVK----NLPIK----VYGHN----VIS 156 (318)
T ss_dssp ECSCBSSCBCSCEEEEE--TT-EEEEEEEEBTTTCCEEEEEEEEETTTTEEEEEC----CCSSC----EESCE----EEE
T ss_pred ECCCCCccccccceEEE--CC-EEEEEcCccCCCCcccceEEEEeCCCCCEeECC----CCCCc----ccccE----EEE
Confidence 11 11111111122222 34 467777754 24788888764321110 00000 12332 112
Q ss_pred EccCCCeEEEEEeC------CCeEEEEeCCCCC
Q psy4571 258 WNPNEPWVICSVSE------DNIMQEYCDSTDS 284 (437)
Q Consensus 258 ~~p~~~~~l~s~~~------dg~i~iwd~~~~~ 284 (437)
.++. +++.|+. -..+.+||+.+.+
T Consensus 157 --~~~~-iyv~GG~~~~~~~~~~~~~yd~~~~~ 186 (318)
T 2woz_A 157 --HNGM-IYCLGGKTDDKKCTNRVFIYNPKKGD 186 (318)
T ss_dssp --ETTE-EEEECCEESSSCBCCCEEEEETTTTE
T ss_pred --ECCE-EEEEcCCCCCCCccceEEEEcCCCCE
Confidence 3555 6667664 2458899998764
No 347
>2jq6_A EH domain-containing protein 1; metal binding protein; NMR {Homo sapiens} PDB: 2kff_A 2kfg_A 2kfh_A 2ksp_A
Probab=85.60 E-value=0.65 Score=35.91 Aligned_cols=51 Identities=33% Similarity=0.477 Sum_probs=42.0
Q ss_pred cccccCHHHHHHHHHhhhccccccccCCCCcccccHHHHHHHHHhcCCChHhhhccccc
Q psy4571 367 SIWSMTDEQREYYKTQFHNLQRHKSVSDPSYHLISGQVARKFFENSKLPVTELRKIWYP 425 (437)
Q Consensus 367 ~~w~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~s~~p~~~~~~~w~~ 425 (437)
.-|.+. ++...+...|..+. ..+ |.|++...+.++..+++|-.++.+||..
T Consensus 42 ~~W~~~-~e~~~l~~~F~~fD-d~d------G~Is~~El~~~l~~~gl~~~el~~I~~~ 92 (139)
T 2jq6_A 42 VEWVVG-KDKPTYDEIFYTLS-PVN------GKITGANAKKEMVKSKLPNTVLGKIWKL 92 (139)
T ss_dssp CCCGGG-GTHHHHHHHHHHSC-CSS------SEEEHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred CCCCCh-HHHHHHHHHHHHhC-CCC------CeECHHHHHHHHHHhCcCHHHHHHHHHH
Confidence 358775 55666888888877 433 8999999999999999999999999964
No 348
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=84.75 E-value=17 Score=34.36 Aligned_cols=115 Identities=9% Similarity=0.077 Sum_probs=62.3
Q ss_pred CeEEEEEeCCCC-cEEEEEeCCCeEEEEeCCCCc--eeeeEec---------cCCCceEEEEEcCC---CCcEEEEEeC-
Q psy4571 151 EVNCLSFNPYSE-YILATGSADKTVALWDLRNLK--LKLHSFE---------SHKDEIFQVQWSPH---NETILASSGT- 214 (437)
Q Consensus 151 ~v~~l~~~~~~~-~~l~sgs~dg~i~lwd~~~~~--~~~~~~~---------~h~~~v~~v~~~p~---~~~~l~sg~~- 214 (437)
....|+|.|+|. + |+.+...|.|++++..... .++..+. ........|+|+|+ +.++.++-+.
T Consensus 15 ~P~~~a~~pdG~~r-l~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~ 93 (463)
T 2wg3_C 15 QPVGALHSGDGSQR-LFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN 93 (463)
T ss_dssp SEEEEECCSSSSCC-EEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEEC
T ss_pred CceEEEECCCCCeE-EEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCC
Confidence 467899999985 4 5666789999999754321 1122221 11456889999996 2334544332
Q ss_pred -C----------CeEEEEEcCCCCCCCCCCCCCCCCCceEEEec--CccccEEEEEEccCCCeEEEEEeC
Q psy4571 215 -D----------RRLHVWDLSKIGEEQSTEDAEDGPPELLFIHG--GHTAKISDFSWNPNEPWVICSVSE 271 (437)
Q Consensus 215 -d----------g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~--~h~~~v~~l~~~p~~~~~l~s~~~ 271 (437)
+ ..|.-|.+........ .....+.+.... ........|+|.|||. |.++.+.
T Consensus 94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~----d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~-LYv~~Gd 158 (463)
T 2wg3_C 94 QERWAIGPHDHILRVVEYTVSRKNPHQV----DLRTARVFLEVAELHRKHLGGQLLFGPDGF-LYIILGD 158 (463)
T ss_dssp CCSSCSSSSCEEEEEEEEEBCTTCTTSB----CGGGCEEEEEEEESSSSSCEEEEEECTTSC-EEEEECC
T ss_pred CCCcccCCcccceEEEEEEEcCCCCCcc----CCCCceEEEEcCCCCCcccCCcEeECCCCc-EEEEeCC
Confidence 1 1344466653211000 000112222221 1122468899999998 5555544
No 349
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=83.31 E-value=4.4 Score=39.13 Aligned_cols=74 Identities=9% Similarity=0.152 Sum_probs=54.4
Q ss_pred CeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCc-----------eeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEE
Q psy4571 151 EVNCLSFNPYSEYILATGSADKTVALWDLRNLK-----------LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLH 219 (437)
Q Consensus 151 ~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~-----------~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~ 219 (437)
....+..+|||++++++|-.+.++.++|.+... ..+..-..-.-.....+|.++|. ...|--.|..|.
T Consensus 324 sPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~-aYTtlfidSqvv 402 (638)
T 3sbq_A 324 NPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGN-AYTTLFIDSQVV 402 (638)
T ss_dssp SCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSE-EEEEETTTTEEE
T ss_pred CCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCc-eEeeeeecceEE
Confidence 345688999999988888889999999988421 11111111234567899999994 577777899999
Q ss_pred EEEcCC
Q psy4571 220 VWDLSK 225 (437)
Q Consensus 220 vwd~~~ 225 (437)
-|++..
T Consensus 403 kWni~~ 408 (638)
T 3sbq_A 403 KWNMEE 408 (638)
T ss_dssp EEEHHH
T ss_pred EEeccH
Confidence 999965
No 350
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=82.98 E-value=29 Score=32.75 Aligned_cols=109 Identities=9% Similarity=0.060 Sum_probs=58.2
Q ss_pred CcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeec---------cCCCCeEEEEEeCC---CCcEEEEEeC--
Q psy4571 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVD---------AHTAEVNCLSFNPY---SEYILATGSA-- 170 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~---------~h~~~v~~l~~~~~---~~~~l~sgs~-- 170 (437)
....|+|.|++...|+++...|.|++++.........+..+. ...+....|+|+|+ +.++.++-+.
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~ 94 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQ 94 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECC
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCC
Confidence 346899999543234456789999999754221112222211 12457899999996 3333444332
Q ss_pred C----------CeEEEEeCCCC---------ceeeeEec--cCCCceEEEEEcCCCCcEEEEEeC
Q psy4571 171 D----------KTVALWDLRNL---------KLKLHSFE--SHKDEIFQVQWSPHNETILASSGT 214 (437)
Q Consensus 171 d----------g~i~lwd~~~~---------~~~~~~~~--~h~~~v~~v~~~p~~~~~l~sg~~ 214 (437)
+ ..|.-|.+... ...+..+. ........|+|.|||. |+++.+.
T Consensus 95 ~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~-LYv~~Gd 158 (463)
T 2wg3_C 95 ERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGF-LYIILGD 158 (463)
T ss_dssp CSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSC-EEEEECC
T ss_pred CCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCc-EEEEeCC
Confidence 1 13444555321 11122221 1123457899999997 5655543
No 351
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=82.55 E-value=27 Score=31.28 Aligned_cols=30 Identities=10% Similarity=-0.145 Sum_probs=17.4
Q ss_pred CCCeEEEEEeCCC------eEEEEeCCCCCCceeeee
Q psy4571 261 NEPWVICSVSEDN------IMQEYCDSTDSDTKTMRL 291 (437)
Q Consensus 261 ~~~~~l~s~~~dg------~i~iwd~~~~~~~~~~~~ 291 (437)
++. +++.|+.++ .+.++++++++.......
T Consensus 316 ~~~-i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~~~~ 351 (357)
T 2uvk_A 316 NNS-LLIIGGETAGGKAVTDSVLITVKDNKVTVQNLE 351 (357)
T ss_dssp TTE-EEEEEEECGGGCEEEEEEEEEC-CCSCEEEC--
T ss_pred CCE-EEEEeeeCCCCCEeeeEEEEEEcCcEeEeeecc
Confidence 555 777777542 456668888776655443
No 352
>1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6
Probab=81.97 E-value=0.5 Score=34.92 Aligned_cols=61 Identities=44% Similarity=0.774 Sum_probs=47.7
Q ss_pred CCCccccccccccCHHHHHHHHHhhhccccccccCCCCcccccHHHHHHHHHhcCCChHhhhccccc
Q psy4571 359 DNDTEDLNSIWSMTDEQREYYKTQFHNLQRHKSVSDPSYHLISGQVARKFFENSKLPVTELRKIWYP 425 (437)
Q Consensus 359 ~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~s~~p~~~~~~~w~~ 425 (437)
|+.......-|.++.++...+...|..+....+ |.|++...+.++...+++-.++.++|..
T Consensus 4 ~~~~~~~~~~~~ls~~~~~~~~~~F~~~D~d~d------G~Is~~el~~~l~~~gl~~~el~~i~~~ 64 (110)
T 1iq3_A 4 QDNSSYPDEPWRITEEQREYYVNQFRSLQPDPS------SFISGSVAKNFFTKSKLSIPELSYIWEL 64 (110)
T ss_dssp CCCCCCCCSSCCCSSSSHHHHHHHHHHHCCSSS------SEEEHHHHHHHCCSSSCSSCCHHHHHHH
T ss_pred CcCCCCCCCCCcCCHHHHHHHHHHHHHHCCCCC------CeEcHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 334434455788877777888888988775433 8999999999999999999999999964
No 353
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=80.25 E-value=35 Score=31.19 Aligned_cols=153 Identities=12% Similarity=0.035 Sum_probs=76.4
Q ss_pred eEEEEeCCCC--ceeeeEecc------CCCceEEEEEc---CC----CCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCC
Q psy4571 173 TVALWDLRNL--KLKLHSFES------HKDEIFQVQWS---PH----NETILASSGTDRRLHVWDLSKIGEEQSTEDAED 237 (437)
Q Consensus 173 ~i~lwd~~~~--~~~~~~~~~------h~~~v~~v~~~---p~----~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~ 237 (437)
.|.+||+.+. +. ++.+.- .......+++. |. +.+..++=+...-|.|+|+.+++..+..... -
T Consensus 124 kLv~~DL~t~~~~l-i~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~-~ 201 (381)
T 3q6k_A 124 AIVAYDLKQPNYPE-VVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPT-F 201 (381)
T ss_dssp EEEEEESSSTTCCE-EEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGG-G
T ss_pred eEEEEECCCCCcee-EEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCC-C
Confidence 4666777775 43 333321 12457788877 32 3344455556778999999987654432111 0
Q ss_pred CC-CceEEEecCcc----ccEEEEEEccC----CCeEEEEEeCCCeEEEEe---CCCCCCceeeeeeecc--cCCceeee
Q psy4571 238 GP-PELLFIHGGHT----AKISDFSWNPN----EPWVICSVSEDNIMQEYC---DSTDSDTKTMRLDSIR--SNGGISST 303 (437)
Q Consensus 238 ~~-~~~~~~~~~h~----~~v~~l~~~p~----~~~~l~s~~~dg~i~iwd---~~~~~~~~~~~~~~~~--~~~~~~~~ 303 (437)
.+ ....+...|.. ..+..|+.+|+ ++.+....-....++--. ++.......+...... .......+
T Consensus 202 ~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~ 281 (381)
T 3q6k_A 202 KAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALA 281 (381)
T ss_dssp SCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEE
T ss_pred ccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEE
Confidence 11 11222333332 47899999998 664444443333333332 1222222222211111 12223345
Q ss_pred ec-CCCCcccccCCCCcccccccccccccccccchh
Q psy4571 304 AS-PTASSTASESPTPTNSVHEKNYWQGLVLFDILV 338 (437)
Q Consensus 304 ~s-~~g~~l~s~s~d~~~~~~~~~~~~~i~~wd~~~ 338 (437)
+. .+|.+.++--.... |..|+..+
T Consensus 282 ~D~~~G~ly~~~~~~~a-----------I~~w~~~~ 306 (381)
T 3q6k_A 282 YDPKTKVIFFAEANTKQ-----------VSCWNTQK 306 (381)
T ss_dssp ECTTTCEEEEEESSSSE-----------EEEEETTS
T ss_pred EeCCCCeEEEEeccCCe-----------EEEEeCCC
Confidence 54 56766666655555 77887754
No 354
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=73.64 E-value=70 Score=31.22 Aligned_cols=59 Identities=14% Similarity=0.184 Sum_probs=36.3
Q ss_pred CeEEEEEeCCCCcEEEEEeCC------------CeEEEEeCCCCceeeeEecc-CCCceEEEEEcCCCCcEEEE
Q psy4571 151 EVNCLSFNPYSEYILATGSAD------------KTVALWDLRNLKLKLHSFES-HKDEIFQVQWSPHNETILAS 211 (437)
Q Consensus 151 ~v~~l~~~~~~~~~l~sgs~d------------g~i~lwd~~~~~~~~~~~~~-h~~~v~~v~~~p~~~~~l~s 211 (437)
..-.|+|+|.|. |++.-..+ ..+.+.+..+++. .+.+.. ...+++.++|+||++++++.
T Consensus 477 ~PDNL~fd~~G~-LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~-~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 477 SPDGLGFDKAGR-LWILTDGDSSNAGDFAGMGNNQMLCADPATGEI-RRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEEECTTCC-EEEEECCCCCCSGGGTTTCSCEEEEECTTTCCE-EEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCcceEECCCCC-EEEEecCCCcccccccccccceEEEEeCCCCeE-EEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 457799999998 44443322 1244455555443 222322 34689999999999875544
No 355
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=73.51 E-value=10 Score=34.18 Aligned_cols=114 Identities=12% Similarity=0.052 Sum_probs=65.9
Q ss_pred EEEEEeCCCeEEEEeCCCCceeeeEeccC-CCceEEEEE--cCCCCcEEEEE-eCCCeEEEEEcCCCCCCCCCCCCCCCC
Q psy4571 164 ILATGSADKTVALWDLRNLKLKLHSFESH-KDEIFQVQW--SPHNETILASS-GTDRRLHVWDLSKIGEEQSTEDAEDGP 239 (437)
Q Consensus 164 ~l~sgs~dg~i~lwd~~~~~~~~~~~~~h-~~~v~~v~~--~p~~~~~l~sg-~~dg~i~vwd~~~~~~~~~~~~~~~~~ 239 (437)
+++.++.||.|.-.|.++++. ...+... ..++....- .+.+..+++.. ..||.|..++..++.....
T Consensus 12 ~V~v~t~dG~l~Ald~~tG~~-~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~-------- 82 (339)
T 2be1_A 12 ILIAADVEGGLHAVDRRNGHI-IWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLP-------- 82 (339)
T ss_dssp EEEEEETTSCEEEEETTTTEE-EEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEE--------
T ss_pred EEEEEeCCCeEEEEECCCCcE-EEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEee--------
Confidence 588999999999999998776 5555432 122222110 01122334343 5799999999876522111
Q ss_pred CceEEEecC--ccccEEE---EEE-cc----CCCeEEEEEeCCCeEEEEeCCCCCCceeeee
Q psy4571 240 PELLFIHGG--HTAKISD---FSW-NP----NEPWVICSVSEDNIMQEYCDSTDSDTKTMRL 291 (437)
Q Consensus 240 ~~~~~~~~~--h~~~v~~---l~~-~p----~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 291 (437)
..... ...++.. ... .+ .+. .+++|+.+|.+...|+++|+.+..+..
T Consensus 83 ----~~~~~lv~~SP~~~~~~pvv~~~~~~~~~g-~Vy~Gs~~g~l~ald~~tG~~~W~~~~ 139 (339)
T 2be1_A 83 ----LSIRQLVSTSPLHLKTNIVVNDSGKIVEDE-KVYTGSMRTIMYTINMLNGEIISAFGP 139 (339)
T ss_dssp ----EEHHHHHTTCSEEEECC----------CCE-EEEECEEEEEEEEEETTTCCEEEEEST
T ss_pred ----eccccceeccccccCCCceeecccccccCC-EEEEEecCCEEEEEECCCCcEEEEEec
Confidence 00000 1111211 000 00 233 678999999999999999998877764
No 356
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=72.26 E-value=83 Score=31.43 Aligned_cols=68 Identities=10% Similarity=0.149 Sum_probs=39.1
Q ss_pred CCCEEEEEECCC--cEEEEEcCCCCCCCCeee---eccCCCCeEEEEEeCCCCcEEEEEeC--C-----CeEEEEeCCCC
Q psy4571 115 HESLFGSVADDQ--KLMIWDTRSHNVSKPSHT---VDAHTAEVNCLSFNPYSEYILATGSA--D-----KTVALWDLRNL 182 (437)
Q Consensus 115 ~~~~l~~~~~dg--~v~vwd~~~~~~~~~~~~---~~~h~~~v~~l~~~~~~~~~l~sgs~--d-----g~i~lwd~~~~ 182 (437)
++.+++.|+.++ .+.+||+.+.. ...+.. .........++.+..+...+++.|+. + ..+..||+.+.
T Consensus 500 ~~~iyv~GG~~~~~~v~~yd~~t~~-W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~ 578 (695)
T 2zwa_A 500 DGNVLILGGVTEGPAMLLYNVTEEI-FKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAE 578 (695)
T ss_dssp TSCEEEECCBCSSCSEEEEETTTTE-EEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTT
T ss_pred CCEEEEECCCCCCCCEEEEECCCCc-eEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCC
Confidence 577888887655 68999987532 111111 11111222335556553446777765 2 45889999886
Q ss_pred c
Q psy4571 183 K 183 (437)
Q Consensus 183 ~ 183 (437)
.
T Consensus 579 ~ 579 (695)
T 2zwa_A 579 N 579 (695)
T ss_dssp C
T ss_pred c
Confidence 5
No 357
>2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens}
Probab=69.91 E-value=5.6 Score=29.09 Aligned_cols=52 Identities=27% Similarity=0.533 Sum_probs=42.8
Q ss_pred ccccCHHHHHHHHHhhhccccccccCCCCcccccHHHHHHHHHhcCCChHhhhccccc
Q psy4571 368 IWSMTDEQREYYKTQFHNLQRHKSVSDPSYHLISGQVARKFFENSKLPVTELRKIWYP 425 (437)
Q Consensus 368 ~w~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~s~~p~~~~~~~w~~ 425 (437)
-|.++.++...+...|..+....+ |.|+....+.++...+++-.++.++|..
T Consensus 5 ~w~ls~~~~~~l~~~F~~~D~d~d------G~I~~~El~~~l~~~~~~~~~~~~i~~~ 56 (111)
T 2kgr_A 5 EWAVPQSSRLKYRQLFNSHDKTMS------GHLTGPQARTILMQSSLPQAQLASIWNL 56 (111)
T ss_dssp CSSSCHHHHHHHHHHHHTTSCSSC------CEEEHHHHHHHHHTTCCCHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCC------CcCcHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 488888888888888987765433 8999999999999888999999999853
No 358
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=69.22 E-value=18 Score=37.86 Aligned_cols=38 Identities=18% Similarity=0.120 Sum_probs=31.6
Q ss_pred cEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeee
Q psy4571 252 KISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMR 290 (437)
Q Consensus 252 ~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 290 (437)
.+.+++..++.. ++++-+.|+++|+|++.+++++.+..
T Consensus 237 ~~~~~~~~~~~~-~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYN-VLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTT-EEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCc-EEEEEECCCEEEEEECCCCCeEeeec
Confidence 567777888877 77799999999999999998776654
No 359
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=63.54 E-value=87 Score=28.38 Aligned_cols=72 Identities=7% Similarity=-0.077 Sum_probs=35.2
Q ss_pred CCcceEEeeCCCCCEEEEEECCC----cEEEEEcCCCCCCCCeee---ecc--------CCCCeEEEEEeCC--CCcEEE
Q psy4571 104 LSRQDVAWHLLHESLFGSVADDQ----KLMIWDTRSHNVSKPSHT---VDA--------HTAEVNCLSFNPY--SEYILA 166 (437)
Q Consensus 104 ~~v~~~~~sp~~~~~l~~~~~dg----~v~vwd~~~~~~~~~~~~---~~~--------h~~~v~~l~~~~~--~~~~l~ 166 (437)
..+.+|++.|.+...+.+++..| .|...+ +.+...+.+.. +.. ....|.++++.|. ... +.
T Consensus 55 ~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~-D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~-l~ 132 (394)
T 3b7f_A 55 HTIHHIVQDPREPERMLMAARTGHLGPTVFRSD-DGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGT-WY 132 (394)
T ss_dssp SEEEEEEECSSSTTCEEEEEEC--CCEEEEEES-STTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTC-EE
T ss_pred CceEEEEECCCCCCeEEEEecCCCCCccEEEeC-CCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCE-EE
Confidence 45788999985444444555454 343321 21112221111 111 1125788999873 343 66
Q ss_pred EEeCCCeEEEE
Q psy4571 167 TGSADKTVALW 177 (437)
Q Consensus 167 sgs~dg~i~lw 177 (437)
.+...+.|...
T Consensus 133 ~g~~~ggl~~S 143 (394)
T 3b7f_A 133 AGTSPQGLFRS 143 (394)
T ss_dssp EEEETTEEEEE
T ss_pred EEecCCcEEEE
Confidence 66666655544
No 360
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=62.22 E-value=1.2e+02 Score=29.49 Aligned_cols=61 Identities=11% Similarity=0.153 Sum_probs=38.5
Q ss_pred CCeEEEEEeCCCCcEEEEEeC------------CCeEEEEeCCCCceeeeEecc-CCCceEEEEEcCCCCcEEEEE
Q psy4571 150 AEVNCLSFNPYSEYILATGSA------------DKTVALWDLRNLKLKLHSFES-HKDEIFQVQWSPHNETILASS 212 (437)
Q Consensus 150 ~~v~~l~~~~~~~~~l~sgs~------------dg~i~lwd~~~~~~~~~~~~~-h~~~v~~v~~~p~~~~~l~sg 212 (437)
.....|.|.++|. |.++-.. ...+..++..+++. ...+.. ....++.++|+||++.++++-
T Consensus 476 nsPDnL~fd~~G~-LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel-~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 476 NSPDGLGFDKAGR-LWILTDGDSSNAGDFAGMGNNQMLCADPATGEI-RRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CCEEEEEECTTCC-EEEEECCCCCCSGGGTTCCSCEEEEECTTTCCE-EEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCCceEECCCCC-EEEEeCCCcCccccccccCCceEEEEeCCCCeE-EEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 4577899999987 4442221 11466666666553 222322 235789999999999766554
No 361
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=58.81 E-value=1.5e+02 Score=29.65 Aligned_cols=181 Identities=13% Similarity=0.119 Sum_probs=93.4
Q ss_pred CcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCce
Q psy4571 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKL 184 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~ 184 (437)
.|.++.-.. ...|-.|+.+| +..||..+... .. ........|.++.. .+|. |..|+.+ -|..+|..+.+
T Consensus 64 ~i~~i~~d~--~g~lWigT~~G-l~~yd~~~~~f-~~--~~~~~~~~i~~i~~-~~g~--lWigt~~-Gl~~~~~~~~~- 132 (758)
T 3ott_A 64 RIYCGVIID--NTYLYMGTDNG-ILVYNYRADRY-EQ--PETDFPTDVRTMAL-QGDT--LWLGALN-GLYTYQLQSRK- 132 (758)
T ss_dssp CEEEEEEET--TTEEEEEETTE-EEEEETTTTEE-CC--CSCCCCSCEEEEEE-ETTE--EEEEETT-EEEEEETTTCC-
T ss_pred eEEEEEEcC--CCcEEEEeCCC-eEEEeCCCCEE-EC--cccCCCceEEEEEe-cCCc--EEEEcCC-cceeEeCCCCe-
Confidence 456666555 34555677666 77899874311 11 11112335777754 3443 6666666 57788987644
Q ss_pred eeeEec-----cCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEc
Q psy4571 185 KLHSFE-----SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWN 259 (437)
Q Consensus 185 ~~~~~~-----~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~ 259 (437)
...+. .....|.++...++|. +. .|..+ -+..++..+........ +.. .......|.++...
T Consensus 133 -~~~~~~~~~~l~~~~i~~i~~d~~g~-lW-igt~~-Gl~~~~~~~~~~~~~~~-----~~~----~~~~~~~i~~i~~d 199 (758)
T 3ott_A 133 -LTSFDTRRNGLPNNTIYSIIRTKDNQ-IY-VGTYN-GLCRYIPSNGKFEGIPL-----PVH----SSQSNLFVNSLLED 199 (758)
T ss_dssp -EEEECHHHHCCSCSCEEEEEECTTCC-EE-EEETT-EEEEEETTTTEEEEECC-----CCC----TTCSSCCEEEEEEE
T ss_pred -EEEeccCCCCcCCCeEEEEEEcCCCC-EE-EEeCC-CHhhCccCCCceEEecC-----CCc----cccccceeEEEEEE
Confidence 22231 1134688888888886 33 34544 47778876532110000 000 00012348888877
Q ss_pred cCCCeEEEEEeCCCeEEEEeCCCCCCceeeeeeecccCCceeeeecCCCCccccc
Q psy4571 260 PNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGISSTASPTASSTASE 314 (437)
Q Consensus 260 p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~ 314 (437)
+++. .|..|.. +-+..+|..+++.. .+.. .....+..+...++|.+++..
T Consensus 200 ~~~~-~lWigt~-~Gl~~~~~~~~~~~-~~~~--l~~~~i~~i~~d~~g~lWigT 249 (758)
T 3ott_A 200 TTRQ-CVWIGTE-GYLFQYFPSTGQIK-QTEA--FHNNSIKSLALDGNGDLLAGT 249 (758)
T ss_dssp TTTT-EEEEEEE-EEEEEEETTTTEEE-EEEE--EEEEEEEEEEECTTCCEEEEE
T ss_pred CCCC-EEEEEEC-CCCeEEcCCCCeEE-eccC--CCCCeEEEEEEcCCCCEEEEe
Confidence 7666 3333443 45788888765322 2211 112223344555667665544
No 362
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=56.91 E-value=96 Score=26.75 Aligned_cols=167 Identities=12% Similarity=0.092 Sum_probs=90.3
Q ss_pred cCceEEEEEeeeccccc----cCCCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeeccCCCCeEEEEEeCC
Q psy4571 85 LNISILFFEIIFTQNFP----FPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPY 160 (437)
Q Consensus 85 ~~~~i~~~~~~~~~~~~----~~~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~h~~~v~~l~~~~~ 160 (437)
.++.+..|-.....+.. ....|..++... ...++-. +|.|..|-.....+.. ........|..++....
T Consensus 79 ~~G~v~~wG~n~~Gqlg~P~~~~~~v~~ia~G~---~hs~al~-~G~v~~wG~n~~gqlg---~~~~~~~~i~~i~~G~~ 151 (282)
T 3qhy_B 79 KDGEVIAWGGNEDGQTTVPAEARSGVDAIAAGA---WASYALK-DGKVIAWGDDSDGQTT---VPAEAQSGVTALDGGVY 151 (282)
T ss_dssp ETTEEEEEECCTTSTTCCCGGGSSSEEEEEEET---TEEEEEE-TTEEEEEECCTTSTTS---CCGGGGSSEEEEEECSS
T ss_pred ECCEEEEeeCCCCCCCCCCcccCCCeEEEECcC---CEEEEEe-CCeEEEecCCCCCcCC---CCccCCCCeEEEEcccC
Confidence 47778777543322222 234566666654 3444455 9999999776422111 11112345777766543
Q ss_pred CCcEEEEEeCCCeEEEEeCCCCceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCC
Q psy4571 161 SEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPP 240 (437)
Q Consensus 161 ~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~ 240 (437)
.. ++. . ||.|..|-...... +..-..-...|..++.-... .++. .||.|..|-.......-. +
T Consensus 152 ~~--~~l-~-~G~v~~wG~n~~gq-lg~p~~~~~~v~~i~~G~~h--s~al--~~G~v~~wG~n~~gqlg~-------p- 214 (282)
T 3qhy_B 152 TA--LAV-K-NGGVIAWGDNYFGQ-TTVPAEAQSGVDDVAGGIFH--SLAL--KDGKVIAWGDNRYKQTTV-------P- 214 (282)
T ss_dssp EE--EEE-E-TTEEEEEECCTTST-TSCCGGGGSSEEEEEECSSE--EEEE--ETTEEEEEECCTTSTTCC-------C-
T ss_pred EE--EEE-E-CCEEEEecCCCCCC-CCCceecCCCeEEEEecCCE--EEEE--ECCeEEEEECCCCCCCCC-------C-
Confidence 32 332 3 79999998765333 21111123567778775443 3444 499999997655432211 0
Q ss_pred ceEEEecCccccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCC
Q psy4571 241 ELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSD 285 (437)
Q Consensus 241 ~~~~~~~~h~~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~ 285 (437)
......|..|+...... ++.. ||.++.|-.....+
T Consensus 215 ------~~~~~~v~~i~~G~~h~--~al~--~g~v~~wG~n~~gq 249 (282)
T 3qhy_B 215 ------TEALSGVSAIASGEWYS--LALK--NGKVIAWGSSRTAP 249 (282)
T ss_dssp ------GGGGSSCCEEEECSSCE--EEEE--TTEEEEESTTCCCC
T ss_pred ------cccCCCceEEEcCCCEE--EEEE--CCEEEEecCCCCcc
Confidence 01123466666544433 3333 99999997665443
No 363
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=56.56 E-value=2.1e+02 Score=30.59 Aligned_cols=92 Identities=11% Similarity=0.010 Sum_probs=57.6
Q ss_pred cCceEEEEEee-----eccccccCCCcceEEeeCCC-----CCEEEEEEC-CCcEEEEEcCCCCCCCCeeeec-cCCCCe
Q psy4571 85 LNISILFFEII-----FTQNFPFPLSRQDVAWHLLH-----ESLFGSVAD-DQKLMIWDTRSHNVSKPSHTVD-AHTAEV 152 (437)
Q Consensus 85 ~~~~i~~~~~~-----~~~~~~~~~~v~~~~~sp~~-----~~~l~~~~~-dg~v~vwd~~~~~~~~~~~~~~-~h~~~v 152 (437)
..+.+.++++. ......++..|.|+++.|.. ..++++|.. |++|+|+++. ..+.+.... +-....
T Consensus 530 ~g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~---~l~~~~~~~L~~~~~p 606 (1158)
T 3ei3_A 530 VGRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLP---SFELLHKEMLGGEIIP 606 (1158)
T ss_dssp ETTEEEEEEEETTEEEEEEEEECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETT---TCCEEEEEECCSSCCE
T ss_pred ECCEEEEEEeeCCceeeecccCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECC---CCCeEEEEECCCCCCC
Confidence 34566666543 22234467789999998743 468999996 9999999998 334333221 112244
Q ss_pred EEEEEeC--CCCcEEEEEeCCCeEEEEeCC
Q psy4571 153 NCLSFNP--YSEYILATGSADKTVALWDLR 180 (437)
Q Consensus 153 ~~l~~~~--~~~~~l~sgs~dg~i~lwd~~ 180 (437)
.++.+.. ... .|..|-.||.+.-+.++
T Consensus 607 ~si~l~~~~~~~-~L~igl~dG~l~~~~~d 635 (1158)
T 3ei3_A 607 RSILMTTFESSH-YLLCALGDGALFYFGLN 635 (1158)
T ss_dssp EEEEEEEETTEE-EEEEEETTSEEEEEEEC
T ss_pred cEEEEEEeCCCc-EEEEEeCCCeEEEEEEc
Confidence 4554432 234 48899999998766554
No 364
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=56.41 E-value=52 Score=34.40 Aligned_cols=36 Identities=22% Similarity=0.253 Sum_probs=28.8
Q ss_pred ceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCC
Q psy4571 195 EIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQS 231 (437)
Q Consensus 195 ~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~ 231 (437)
.+.+++..++.. ++++-+.|+++|+|++.++++..+
T Consensus 237 ~~~~~~~~~~~~-~lftl~~D~~LRiWsl~t~~~v~t 272 (950)
T 4gq2_M 237 TIISMIFLSTYN-VLVMLSLDYKLKVLDLSTNQCVET 272 (950)
T ss_dssp CEEEEEEETTTT-EEEEEETTCEEEEEETTTTEEEEE
T ss_pred eEEEEeecCCCc-EEEEEECCCEEEEEECCCCCeEee
Confidence 466777777776 588999999999999999876544
No 365
>1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6
Probab=53.44 E-value=4.7 Score=28.78 Aligned_cols=42 Identities=24% Similarity=0.350 Sum_probs=33.5
Q ss_pred HHHHhhhccccccccCCCCcccccHHHHHHHHHhcCCChHhhhccccc
Q psy4571 378 YYKTQFHNLQRHKSVSDPSYHLISGQVARKFFENSKLPVTELRKIWYP 425 (437)
Q Consensus 378 ~~~~~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~s~~p~~~~~~~w~~ 425 (437)
.+...|..+...- -|.|++...+.++...++|-.++.++|..
T Consensus 12 ~~~~~F~~~D~d~------dG~Is~~el~~~l~~~~l~~~~l~~i~~~ 53 (99)
T 1qjt_A 12 VYEKYYRQVEAGN------TGRVLALDAAAFLKKSGLPDLILGKIWDL 53 (99)
T ss_dssp HHHHHHHHHCCTT------SSCCCSHHHHHHHHTSSSCHHHHHHHHHH
T ss_pred HHHHHHHHHCCCC------CCcCCHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 3556676665433 38999999999999999999999999964
No 366
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=52.74 E-value=2e+02 Score=29.16 Aligned_cols=113 Identities=12% Similarity=0.080 Sum_probs=57.0
Q ss_pred CCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeecc----CCCCeEEEEEeCCCCcEEEEEeCCCe----EE
Q psy4571 104 LSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDA----HTAEVNCLSFNPYSEYILATGSADKT----VA 175 (437)
Q Consensus 104 ~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~----h~~~v~~l~~~~~~~~~l~sgs~dg~----i~ 175 (437)
..|.+|+++|.+...+.++...+.|...+=. +...+.+..... ....|.+++++|.....+..+..+.. -.
T Consensus 15 g~i~~i~~~p~~~~~~~a~~~~ggv~rS~Dg-G~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~~ 93 (789)
T 1sqj_A 15 GYITGIVAHPKTKDLLYARTDIGGAYRWDAG-TSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWAA 93 (789)
T ss_dssp SCEEEEEECSSSTTCEEEEESSSCEEEEETT-TTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCCE
T ss_pred CcEEEEEECCCCCCEEEEEecCCCEEEecCC-CCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCcccE
Confidence 4788999999777777778877766544321 111111111000 12469999999865434555443211 23
Q ss_pred EEeCCCCceeeeEecc-------CC--CceEEEEEcCCCCcEEEEEeCCCe
Q psy4571 176 LWDLRNLKLKLHSFES-------HK--DEIFQVQWSPHNETILASSGTDRR 217 (437)
Q Consensus 176 lwd~~~~~~~~~~~~~-------h~--~~v~~v~~~p~~~~~l~sg~~dg~ 217 (437)
||--..+...-..... .. ..+..++++|.....+..+...+.
T Consensus 94 v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~g 144 (789)
T 1sqj_A 94 FYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEG 144 (789)
T ss_dssp EEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSC
T ss_pred EEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCC
Confidence 3333322211111110 01 135678888865444556653433
No 367
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=50.88 E-value=1.4e+02 Score=26.90 Aligned_cols=54 Identities=4% Similarity=-0.041 Sum_probs=28.1
Q ss_pred CCEEEEEECCCcEEEEEcCC-CCCCCCeeeeccCCCCeEEEEEeCC-CCcEEEEEeCCC
Q psy4571 116 ESLFGSVADDQKLMIWDTRS-HNVSKPSHTVDAHTAEVNCLSFNPY-SEYILATGSADK 172 (437)
Q Consensus 116 ~~~l~~~~~dg~v~vwd~~~-~~~~~~~~~~~~h~~~v~~l~~~~~-~~~~l~sgs~dg 172 (437)
...|.+|+..| +.+++... +........ ......|.+|++.|. ... |..++..|
T Consensus 22 ~g~l~vgt~~G-l~~~~~~~~g~~W~~~~~-~~~~~~v~~i~~dp~~~~~-l~~g~~~g 77 (394)
T 3b7f_A 22 PVMLLVATIKG-AWFLASDPARRTWELRGP-VFLGHTIHHIVQDPREPER-MLMAARTG 77 (394)
T ss_dssp CCEEEEEETTE-EEEEEECTTSCSEEEEEE-ESTTSEEEEEEECSSSTTC-EEEEEEC-
T ss_pred CCEEEEEecCc-eEEEECCCCCCCceECCc-cCCCCceEEEEECCCCCCe-EEEEecCC
Confidence 45677788877 55555432 111222111 122456999999982 232 55555554
No 368
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=49.35 E-value=1.3e+02 Score=25.94 Aligned_cols=147 Identities=11% Similarity=0.143 Sum_probs=82.4
Q ss_pred CCcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCC-CCCeeeeccCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCC
Q psy4571 104 LSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNV-SKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNL 182 (437)
Q Consensus 104 ~~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~-~~~~~~~~~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~ 182 (437)
..|..++... ...++. . ||.|..|-.....+ ..+.. -...|..++..... .+.-. ||.|..|-....
T Consensus 63 ~~i~~ia~G~--~hs~~l-~-~G~v~~wG~n~~Gqlg~P~~----~~~~v~~ia~G~~h---s~al~-~G~v~~wG~n~~ 130 (282)
T 3qhy_B 63 SGVDAIAAGN--YHSLAL-K-DGEVIAWGGNEDGQTTVPAE----ARSGVDAIAAGAWA---SYALK-DGKVIAWGDDSD 130 (282)
T ss_dssp SCCCEEEECS--SEEEEE-E-TTEEEEEECCTTSTTCCCGG----GSSSEEEEEEETTE---EEEEE-TTEEEEEECCTT
T ss_pred CCEEEEEeCC--CEEEEE-E-CCEEEEeeCCCCCCCCCCcc----cCCCeEEEECcCCE---EEEEe-CCeEEEecCCCC
Confidence 3566666654 233443 5 99999998764322 11111 13468888776543 33334 999999987653
Q ss_pred ceeeeEeccCCCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEccCC
Q psy4571 183 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNE 262 (437)
Q Consensus 183 ~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~ 262 (437)
.. +.........|..++..... .++. . ||.|..|-......... | ..-...|..|+.....
T Consensus 131 gq-lg~~~~~~~~i~~i~~G~~~--~~~l-~-~G~v~~wG~n~~gqlg~-------p-------~~~~~~v~~i~~G~~h 191 (282)
T 3qhy_B 131 GQ-TTVPAEAQSGVTALDGGVYT--ALAV-K-NGGVIAWGDNYFGQTTV-------P-------AEAQSGVDDVAGGIFH 191 (282)
T ss_dssp ST-TSCCGGGGSSEEEEEECSSE--EEEE-E-TTEEEEEECCTTSTTSC-------C-------GGGGSSEEEEEECSSE
T ss_pred Cc-CCCCccCCCCeEEEEcccCE--EEEE-E-CCEEEEecCCCCCCCCC-------c-------eecCCCeEEEEecCCE
Confidence 33 21111223567777765433 2333 3 79999998765432211 0 0113467777765443
Q ss_pred CeEEEEEeCCCeEEEEeCCCCCC
Q psy4571 263 PWVICSVSEDNIMQEYCDSTDSD 285 (437)
Q Consensus 263 ~~~l~s~~~dg~i~iwd~~~~~~ 285 (437)
.++. .||.++.|-.....+
T Consensus 192 --s~al--~~G~v~~wG~n~~gq 210 (282)
T 3qhy_B 192 --SLAL--KDGKVIAWGDNRYKQ 210 (282)
T ss_dssp --EEEE--ETTEEEEEECCTTST
T ss_pred --EEEE--ECCeEEEEECCCCCC
Confidence 3433 599999997665433
No 369
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=49.32 E-value=2.2e+02 Score=28.58 Aligned_cols=108 Identities=11% Similarity=0.018 Sum_probs=55.0
Q ss_pred CcceEEeeCCCCCEEEEEECCCcEEEEEcCCCCCCCCeeeecc----CCCCeEEEEEeCCCCcEEEEEeCC-------Ce
Q psy4571 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDA----HTAEVNCLSFNPYSEYILATGSAD-------KT 173 (437)
Q Consensus 105 ~v~~~~~sp~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~----h~~~v~~l~~~~~~~~~l~sgs~d-------g~ 173 (437)
.|..|+++|.+...+.++...|.|...+-. +...+.+....+ ....|.+|+++|.....++.+... +.
T Consensus 24 ~i~~i~~~p~~~~~~~~~~~~ggv~rS~D~-G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~~~ 102 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYARAAIGGAYRWDPS-TETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLPNM 102 (737)
T ss_dssp CCCEEEECSSSTTCEEEECSSSCEEEEETT-TTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSCCC
T ss_pred eeeEEEECCCCCCEEEEEecCCcEEEeCCC-CCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccccccCC
Confidence 788999999776777777766665554322 111111111001 123599999998543335444321 12
Q ss_pred EEEEeCCCCceeeeEec-cCC--------CceEEEEEcCCCCcEEEEEe
Q psy4571 174 VALWDLRNLKLKLHSFE-SHK--------DEIFQVQWSPHNETILASSG 213 (437)
Q Consensus 174 i~lwd~~~~~~~~~~~~-~h~--------~~v~~v~~~p~~~~~l~sg~ 213 (437)
..||--..+...-.... ... ..+..++++|..+..+..+.
T Consensus 103 ~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~ 151 (737)
T 2cn3_A 103 GAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGT 151 (737)
T ss_dssp CEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEEC
T ss_pred ccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEee
Confidence 34454433221111111 110 12467999987654455665
No 370
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=46.99 E-value=34 Score=36.58 Aligned_cols=39 Identities=21% Similarity=0.151 Sum_probs=30.5
Q ss_pred cEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeee
Q psy4571 252 KISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRL 291 (437)
Q Consensus 252 ~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 291 (437)
.+.+++..++.. ++++-+.|+++|+|++.+++++.+..+
T Consensus 239 ~~vs~~~~~~~~-~lftL~~D~~LRiWsl~t~~~v~t~DL 277 (1139)
T 4fhn_B 239 TIISMIFLSTYN-VLVMLSLDYKLKVLDLSTNQCVETIEL 277 (1139)
T ss_dssp CBSCCEEETTTT-EEEEEBTTCEEEEEETTTTEEEEEEEC
T ss_pred eeEEeeccCCcc-EEEEEeCCCEEEEEECCCCCeEEeech
Confidence 344556667777 778999999999999999988776653
No 371
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=42.49 E-value=1.9e+02 Score=26.08 Aligned_cols=160 Identities=13% Similarity=0.131 Sum_probs=79.7
Q ss_pred CCCEEEEEECCCcEEEEEcCCCCC-----CCCe---eeec-cCCCCeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCc--
Q psy4571 115 HESLFGSVADDQKLMIWDTRSHNV-----SKPS---HTVD-AHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLK-- 183 (437)
Q Consensus 115 ~~~~l~~~~~dg~v~vwd~~~~~~-----~~~~---~~~~-~h~~~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~-- 183 (437)
+....++-..||.|..|-.....+ .... ..+. .....+..++.+.-..+ .+.-..||.|..|-.....
T Consensus 61 G~~~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i~~G~~h-~~al~~~G~v~~wG~n~~GqL 139 (389)
T 3kci_A 61 GEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKH-CLALSSEGEVYSWGEAEDGKL 139 (389)
T ss_dssp ETTEEEEEETTSCEEEEECCGGGTTSSSSSCCEEEEEECGGGTTSCEEEEEECTTCSE-EEEEETTSCEEEEECCGGGTT
T ss_pred CCCeEEEEcCCCcEEEEECCCCCCCCCCCcCCccCCEEcccccCCceeEEEECcCCCe-EEEEcCCCCEEEEeCCCCCcC
Confidence 445666677899999996542111 0111 1111 11224555666655554 6667889999999654311
Q ss_pred --------eeeeEeccC-CCceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEE
Q psy4571 184 --------LKLHSFESH-KDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKIS 254 (437)
Q Consensus 184 --------~~~~~~~~h-~~~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 254 (437)
.....+... ...|..++.... ..+.-..||.|..|-.......-.-.. .....+.....-....|.
T Consensus 140 G~g~~~~~~~p~~v~~l~~~~i~~va~G~~---hs~alt~~G~v~~wG~n~~GqLG~~~~--~~~~~p~~v~~~~~~~v~ 214 (389)
T 3kci_A 140 GHGNRSPCDRPRVIESLRGIEVVDVAAGGA---HSACVTAAGDLYTWGKGRYGRLGHSDS--EDQLKPKLVEALQGHRVV 214 (389)
T ss_dssp CSSSCCCEEEEEECGGGTTSCEEEEEECSS---EEEEEETTSCEEEEECCGGGTTCSSSC--CCEEEEEECGGGTTSCEE
T ss_pred CCCCCccCcCCeEecccCCCeEEEEEeCcC---eEEEEeCCCeEEEeCCCCCCCcCCCCC--cccccceEecccCCCeEE
Confidence 001112111 225666666432 244556799999997654221110000 000001111111123567
Q ss_pred EEEEccCCCeEEEEEeCCCeEEEEeCC
Q psy4571 255 DFSWNPNEPWVICSVSEDNIMQEYCDS 281 (437)
Q Consensus 255 ~l~~~p~~~~~l~s~~~dg~i~iwd~~ 281 (437)
.++...... ..+.-..||.|+.|-..
T Consensus 215 ~ia~G~g~~-~t~~l~~~G~v~~wG~n 240 (389)
T 3kci_A 215 DIACGSGDA-QTLCLTDDDTVWSWGDG 240 (389)
T ss_dssp EEEECCSSC-EEEEEETTTEEEEEECC
T ss_pred EEEEcCCCc-EEEEEccCCEEEEEeCC
Confidence 776644223 34456788999999654
No 372
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=41.71 E-value=61 Score=32.43 Aligned_cols=34 Identities=24% Similarity=0.327 Sum_probs=25.0
Q ss_pred ceEEEEEcCCCCcEEEEEeCCCeEEEEEcCCCCCCCC
Q psy4571 195 EIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQS 231 (437)
Q Consensus 195 ~v~~v~~~p~~~~~l~sg~~dg~i~vwd~~~~~~~~~ 231 (437)
.|.++.+ +.. ++++-+.|.++|+|++++++....
T Consensus 223 ~Is~~~~--~~~-fLftL~~Dh~LRiWsL~t~~lv~t 256 (729)
T 3f7f_A 223 VISCKLF--HER-YLIVLTQNCHLKIWDLTSFTLIQD 256 (729)
T ss_dssp EEEEEEE--TTT-EEEEEETTCEEEEEETTTTEEEEE
T ss_pred eEEEecc--CCc-EEEEEEcCCeEEEEEcCCCceEEe
Confidence 3555544 344 588999999999999999875443
No 373
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=36.91 E-value=66 Score=34.36 Aligned_cols=33 Identities=18% Similarity=0.133 Sum_probs=26.4
Q ss_pred CeEEEEEeCCCCcEEEEEeCCCeEEEEeCCCCce
Q psy4571 151 EVNCLSFNPYSEYILATGSADKTVALWDLRNLKL 184 (437)
Q Consensus 151 ~v~~l~~~~~~~~~l~sgs~dg~i~lwd~~~~~~ 184 (437)
.+.+++..++..+ +++-+.|+++|+|++.+++.
T Consensus 239 ~~vs~~~~~~~~~-lftL~~D~~LRiWsl~t~~~ 271 (1139)
T 4fhn_B 239 TIISMIFLSTYNV-LVMLSLDYKLKVLDLSTNQC 271 (1139)
T ss_dssp CBSCCEEETTTTE-EEEEBTTCEEEEEETTTTEE
T ss_pred eeEEeeccCCccE-EEEEeCCCEEEEEECCCCCe
Confidence 4555666777775 88999999999999999654
No 374
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=33.35 E-value=2.8e+02 Score=25.22 Aligned_cols=157 Identities=11% Similarity=0.148 Sum_probs=79.9
Q ss_pred CCeEEEEEe---CC----CCcEEEEEeCCCeEEEEeCCCCceeeeEec--------------cC----CCceEEEEEcCC
Q psy4571 150 AEVNCLSFN---PY----SEYILATGSADKTVALWDLRNLKLKLHSFE--------------SH----KDEIFQVQWSPH 204 (437)
Q Consensus 150 ~~v~~l~~~---~~----~~~~l~sgs~dg~i~lwd~~~~~~~~~~~~--------------~h----~~~v~~v~~~p~ 204 (437)
..+..+.+. |. +.+..++=+..+-|.++|+.+++. .+... +. ...+..++++|+
T Consensus 152 S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~s-wRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~ 230 (381)
T 3q6k_A 152 TYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDS-WNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDR 230 (381)
T ss_dssp GGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEE-EEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCC
T ss_pred CccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcE-EEEccCCCccccCcceEECCEEeEeccCceEEEecCC
Confidence 457888887 22 344344444578899999998653 22221 10 246888999998
Q ss_pred ----CCcEEEEEeCCCeEEEEEcCCCCCCCCCCCCCCCCCceEEEecCccccEEEEEEc-cCCCeEEEEEeCCCeEEEEe
Q psy4571 205 ----NETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWN-PNEPWVICSVSEDNIMQEYC 279 (437)
Q Consensus 205 ----~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~-p~~~~~l~s~~~dg~i~iwd 279 (437)
++.+....-....+ |.+.+.-..... .....+.+.. ++-...-..++.. .+|. ++++--..+.|..|+
T Consensus 231 ~~~~~~~LYf~plss~~l--y~V~T~~L~~~~---~~~~v~~~G~-kg~~s~~~~~~~D~~~G~-ly~~~~~~~aI~~w~ 303 (381)
T 3q6k_A 231 DSEGNRPAYYLAGSAIKV--YSVNTKELKQKG---GKLNPELLGN-RGKYNDAIALAYDPKTKV-IFFAEANTKQVSCWN 303 (381)
T ss_dssp CTTSCCEEEEEESSCSEE--EEEEHHHHSSTT---CCCCCEEEEE-CCTTCCEEEEEECTTTCE-EEEEESSSSEEEEEE
T ss_pred cCCCCeEEEEEECCCCcE--EEEEHHHhhCcc---hhhceEEeee-cCCCCCcceEEEeCCCCe-EEEEeccCCeEEEEe
Confidence 66544444333333 333321111000 0111122222 1211234456675 4565 777888889999999
Q ss_pred CCCCC----CceeeeeeecccCCceeeeecCCCCcccccC
Q psy4571 280 DSTDS----DTKTMRLDSIRSNGGISSTASPTASSTASES 315 (437)
Q Consensus 280 ~~~~~----~~~~~~~~~~~~~~~~~~~~s~~g~~l~s~s 315 (437)
..+.. ....+. ....-.-+-.+.+.++|.+.+...
T Consensus 304 ~~~~~~~~~n~~~l~-~d~~l~~pd~~~i~~~g~Lwv~sn 342 (381)
T 3q6k_A 304 TQKMPLRMKNTDVVY-TSSRFVFGTDISVDSKGGLWFMSN 342 (381)
T ss_dssp TTSCSBCGGGEEEEE-ECTTCCSEEEEEECTTSCEEEEEC
T ss_pred CCCCccccCceEEEE-ECCCccccCeEEECCCCeEEEEEC
Confidence 87511 112222 111222233345556776555554
No 375
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=29.77 E-value=66 Score=32.15 Aligned_cols=38 Identities=8% Similarity=0.046 Sum_probs=30.0
Q ss_pred ccEEEEEEccCCCeEEEEEeCCCeEEEEeCCCCCCceeeee
Q psy4571 251 AKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRL 291 (437)
Q Consensus 251 ~~v~~l~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 291 (437)
..|.++.+ +.. ++++-+.|..+|+||+.+++++.+...
T Consensus 222 ~~Is~~~~--~~~-fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 222 SVISCKLF--HER-YLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp CEEEEEEE--TTT-EEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred ceEEEecc--CCc-EEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 34666555 355 788999999999999999988777765
No 376
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=23.76 E-value=2.1e+02 Score=27.94 Aligned_cols=57 Identities=14% Similarity=0.221 Sum_probs=33.1
Q ss_pred ceEEeeCCCCCEEEEEECC------------CcEEEEEcCCCCCCCCeeeeccC-CCCeEEEEEeCCCCcEEEE
Q psy4571 107 QDVAWHLLHESLFGSVADD------------QKLMIWDTRSHNVSKPSHTVDAH-TAEVNCLSFNPYSEYILAT 167 (437)
Q Consensus 107 ~~~~~sp~~~~~l~~~~~d------------g~v~vwd~~~~~~~~~~~~~~~h-~~~v~~l~~~~~~~~~l~s 167 (437)
--|+|+| .+++++.-..+ ..+.+.+.. ..+..+.+.+. ...++.++|+||++.+++.
T Consensus 479 DNL~fd~-~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~---~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 479 DGLGFDK-AGRLWILTDGDSSNAGDFAGMGNNQMLCADPA---TGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEECT-TCCEEEEECCCCCCSGGGTTTCSCEEEEECTT---TCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred cceEECC-CCCEEEEecCCCcccccccccccceEEEEeCC---CCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 4588999 46665543322 124444544 23333333333 4579999999999874443
Done!