Your job contains 1 sequence.
>psy4571
MAISIQALTSPKLLLHLSQNAFFTWSALPLSHSIYRFYRLCVAEPFDDAVEERVINEEYK
IWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSRQDVAWHLLHESLFG
SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR
NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPP
ELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGI
SSTASPTASSTASESPTPTNSVHEKNYWQGLVLFDILVCEEQRQLLGTEEESSDRHSSDN
DTEDLNSIWSMTDEQREYYKTQFHNLQRHKSVSDPSYHLISGQVARKFFENSKLPVTELR
KIWYPDSNKILSTWNVT
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy4571
(437 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0263979 - symbol:Caf1 "Chromatin assembly factor 1... 900 3.5e-105 2
ZFIN|ZDB-GENE-030131-848 - symbol:rbb4l "retinoblastoma b... 885 9.5e-103 2
UNIPROTKB|Q9W7I5 - symbol:RBBP4 "Histone-binding protein ... 884 1.2e-102 2
UNIPROTKB|F2Z4M0 - symbol:RBBP4 "Histone-binding protein ... 884 1.2e-102 2
UNIPROTKB|Q3MHL3 - symbol:RBBP4 "Histone-binding protein ... 884 1.2e-102 2
UNIPROTKB|E2QXR8 - symbol:RBBP4 "Uncharacterized protein"... 884 1.2e-102 2
UNIPROTKB|Q09028 - symbol:RBBP4 "Histone-binding protein ... 884 1.2e-102 2
MGI|MGI:1194912 - symbol:Rbbp4 "retinoblastoma binding pr... 884 1.2e-102 2
RGD|1593768 - symbol:Rbbp4 "retinoblastoma binding protei... 884 1.2e-102 2
UNIPROTKB|Q5M7K4 - symbol:rbbp4 "Histone-binding protein ... 884 1.2e-102 2
UNIPROTKB|Q6INH0 - symbol:rbbp4-b "Histone-binding protei... 884 1.2e-102 2
UNIPROTKB|O93377 - symbol:rbbp4-a "Histone-binding protei... 884 1.2e-102 2
ZFIN|ZDB-GENE-030131-445 - symbol:rbb4 "retinoblastoma bi... 883 1.5e-102 2
UNIPROTKB|Q5RF92 - symbol:RBBP4 "Histone-binding protein ... 884 4.1e-102 2
UNIPROTKB|Q6P315 - symbol:rbbp7 "Histone-binding protein ... 877 2.2e-101 2
UNIPROTKB|Q8AVH1 - symbol:rbbp7 "Histone-binding protein ... 877 2.2e-101 2
UNIPROTKB|Q3SWX8 - symbol:RBBP7 "Histone-binding protein ... 872 7.5e-101 2
UNIPROTKB|E2RM49 - symbol:RBBP7 "Uncharacterized protein"... 872 7.5e-101 2
UNIPROTKB|Q16576 - symbol:RBBP7 "Histone-binding protein ... 872 7.5e-101 2
UNIPROTKB|F1SQR0 - symbol:LOC100519001 "Uncharacterized p... 872 7.5e-101 2
UNIPROTKB|Q4R304 - symbol:RBBP7 "Histone-binding protein ... 872 7.5e-101 2
RGD|620125 - symbol:Rbbp7 "retinoblastoma binding protein... 872 7.5e-101 2
MGI|MGI:1194910 - symbol:Rbbp7 "retinoblastoma binding pr... 872 7.5e-101 2
UNIPROTKB|E2RM67 - symbol:RBBP7 "Uncharacterized protein"... 872 1.6e-100 2
UNIPROTKB|I3LV46 - symbol:LOC100519001 "Uncharacterized p... 872 1.6e-100 2
UNIPROTKB|Q9I8G9 - symbol:RBBP7 "Histone-binding protein ... 877 3.2e-100 2
UNIPROTKB|Q5R654 - symbol:RBBP7 "Histone-binding protein ... 860 1.4e-99 2
RGD|1563620 - symbol:RGD1563620 "similar to retinoblastom... 860 8.7e-98 2
UNIPROTKB|Q61Y48 - symbol:lin-53 "Probable histone-bindin... 805 1.0e-90 2
UNIPROTKB|I3LKT8 - symbol:RBBP4 "Uncharacterized protein"... 884 1.6e-88 1
UNIPROTKB|K7GRD3 - symbol:LOC100519001 "Uncharacterized p... 872 2.9e-87 1
UNIPROTKB|E9PC52 - symbol:RBBP7 "Histone-binding protein ... 872 2.9e-87 1
UNIPROTKB|H0YCT5 - symbol:RBBP4 "Histone-binding protein ... 807 2.2e-80 1
WB|WBGene00003036 - symbol:lin-53 species:6239 "Caenorhab... 805 3.7e-80 1
UNIPROTKB|P90916 - symbol:lin-53 "Probable histone-bindin... 805 3.7e-80 1
UNIPROTKB|B4DRT0 - symbol:RBBP4 "Histone-binding protein ... 773 9.0e-77 1
TAIR|locus:2161253 - symbol:MSI1 "MULTICOPY SUPRESSOR OF ... 651 1.6e-75 2
DICTYBASE|DDB_G0282529 - symbol:rbbD "putative Retinoblas... 698 8.0e-69 1
TAIR|locus:2059856 - symbol:MSI2 "AT2G16780" species:3702... 576 2.6e-63 2
ASPGD|ASPL0000017699 - symbol:AN8187 species:162425 "Emer... 540 2.9e-62 2
TAIR|locus:2131551 - symbol:MSI3 "MULTICOPY SUPPRESSOR OF... 558 9.9e-62 2
WB|WBGene00004312 - symbol:rba-1 species:6239 "Caenorhabd... 567 2.6e-61 2
POMBASE|SPCC1672.10 - symbol:mis16 "kinetochore protein M... 547 3.3e-61 2
POMBASE|SPAC29A4.18 - symbol:prw1 "Clr6 histone deacetyla... 485 3.0e-46 1
SGD|S000000782 - symbol:HAT2 "Subunit of the Hat1p-Hat2p ... 371 7.4e-40 2
CGD|CAL0005349 - symbol:HAT2 species:5476 "Candida albica... 370 4.0e-39 2
UNIPROTKB|Q59RH5 - symbol:HAT2 "Histone acetyltransferase... 370 4.0e-39 2
GENEDB_PFALCIPARUM|PF14_0314 - symbol:PF14_0314 "chromati... 316 8.8e-32 2
UNIPROTKB|Q8ILD0 - symbol:PF14_0314 "Chromatin assembly f... 316 8.8e-32 2
TAIR|locus:2050372 - symbol:FVE species:3702 "Arabidopsis... 322 1.2e-28 1
UNIPROTKB|Q5JNZ6 - symbol:RBBP7 "Histone-binding protein ... 316 2.4e-28 1
TAIR|locus:2134408 - symbol:NFC5 "AT4G29730" species:3702... 311 1.6e-27 1
GENEDB_PFALCIPARUM|PFA0520c - symbol:PFA0520c "chromatin ... 281 4.0e-25 2
UNIPROTKB|Q8I238 - symbol:PFA_0520c "Chromatin assembly f... 281 4.0e-25 2
CGD|CAL0003130 - symbol:orf19.7185 species:5476 "Candida ... 254 4.1e-25 2
UNIPROTKB|Q5A0B0 - symbol:CaO19.7185 "Putative uncharacte... 254 4.1e-25 2
SGD|S000000399 - symbol:MSI1 "Subunit of chromatin assemb... 239 2.2e-20 2
DICTYBASE|DDB_G0291566 - symbol:grwd1 "glutamate-rich WD ... 263 2.2e-20 1
ZFIN|ZDB-GENE-030131-9844 - symbol:grwd1 "glutamate-rich ... 255 4.9e-20 2
FB|FBgn0022288 - symbol:l(2)09851 "lethal (2) 09851" spec... 254 2.1e-19 1
POMBASE|SPBC1711.07 - symbol:SPBC1711.07 "WD repeat prote... 252 4.5e-19 1
TAIR|locus:2050388 - symbol:AT2G19540 "AT2G19540" species... 250 7.1e-19 1
CGD|CAL0005992 - symbol:orf19.3581 species:5476 "Candida ... 235 3.1e-17 1
FB|FBgn0032341 - symbol:Reps species:7227 "Drosophila mel... 244 4.5e-17 2
GENEDB_PFALCIPARUM|PF13_0149 - symbol:PF13_0149 "chromati... 207 1.3e-16 2
UNIPROTKB|Q8IE52 - symbol:PF13_0149 "Chromatin assembly f... 207 1.3e-16 2
UNIPROTKB|E2RBY0 - symbol:GRWD1 "Uncharacterized protein"... 229 1.6e-16 1
RGD|1310649 - symbol:Grwd1 "glutamate-rich WD repeat cont... 229 1.7e-16 1
UNIPROTKB|Q1JQD2 - symbol:GRWD1 "Glutamate-rich WD repeat... 228 2.2e-16 1
MGI|MGI:2141989 - symbol:Grwd1 "glutamate-rich WD repeat ... 226 3.8e-16 1
UNIPROTKB|Q9BQ67 - symbol:GRWD1 "Glutamate-rich WD repeat... 226 3.8e-16 1
WB|WBGene00021899 - symbol:Y54H5A.1 species:6239 "Caenorh... 226 4.0e-16 1
ASPGD|ASPL0000069856 - symbol:AN7205 species:162425 "Emer... 226 5.0e-16 1
CGD|CAL0001341 - symbol:orf19.6355 species:5476 "Candida ... 226 5.7e-16 1
UNIPROTKB|Q59PD8 - symbol:RRB1 "Likely nucleolar ribosome... 226 5.7e-16 1
UNIPROTKB|F1RL85 - symbol:GRWD1 "Uncharacterized protein"... 221 1.4e-15 1
SGD|S000004738 - symbol:RRB1 "Nuclear protein involved in... 220 2.7e-15 1
UNIPROTKB|F1N575 - symbol:TAF5L "Uncharacterized protein"... 208 8.2e-14 1
UNIPROTKB|E2RR78 - symbol:TAF5L "Uncharacterized protein"... 204 2.4e-13 1
UNIPROTKB|O75529 - symbol:TAF5L "TAF5-like RNA polymerase... 200 6.5e-13 1
UNIPROTKB|F1RG42 - symbol:TAF5L "Uncharacterized protein"... 199 8.4e-13 1
TAIR|locus:2029939 - symbol:PEX7 "AT1G29260" species:3702... 190 1.5e-12 1
UNIPROTKB|Q7PS24 - symbol:Ciao1 "Probable cytosolic iron-... 191 1.6e-12 1
DICTYBASE|DDB_G0279801 - symbol:pex7 "peroxisomal biogene... 188 2.6e-12 1
FB|FBgn0035922 - symbol:Pex7 "Peroxin 7" species:7227 "Dr... 187 4.7e-12 1
MGI|MGI:1919039 - symbol:Taf5l "TAF5-like RNA polymerase ... 190 8.5e-12 1
UNIPROTKB|E1C8E9 - symbol:TAF5L "Uncharacterized protein"... 187 1.7e-11 1
UNIPROTKB|B0XAF3 - symbol:Ciao1 "Probable cytosolic iron-... 181 2.3e-11 1
UNIPROTKB|K7GKX8 - symbol:LOC100519001 "Uncharacterized p... 145 5.7e-11 2
DICTYBASE|DDB_G0267382 - symbol:corA "coronin" species:44... 179 8.3e-11 1
UNIPROTKB|Q17GR9 - symbol:Ciao1 "Probable cytosolic iron-... 176 8.6e-11 1
UNIPROTKB|B3NQR5 - symbol:Ciao1 "Probable cytosolic iron-... 175 1.1e-10 1
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 173 1.4e-10 1
UNIPROTKB|B4GDM7 - symbol:Ciao1 "Probable cytosolic iron-... 174 1.4e-10 1
UNIPROTKB|Q292E8 - symbol:Ciao1 "Probable cytosolic iron-... 174 1.4e-10 1
ZFIN|ZDB-GENE-030131-5987 - symbol:taf5l "TAF5-like RNA p... 179 1.5e-10 1
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 173 1.8e-10 1
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 173 1.8e-10 1
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 173 1.8e-10 1
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 173 1.8e-10 1
WARNING: Descriptions of 812 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0263979 [details] [associations]
symbol:Caf1 "Chromatin assembly factor 1 subunit"
species:7227 "Drosophila melanogaster" [GO:0016584 "nucleosome
positioning" evidence=IDA] [GO:0042826 "histone deacetylase
binding" evidence=ISS;IDA] [GO:0031497 "chromatin assembly"
evidence=ISS;IDA] [GO:0033186 "CAF-1 complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0042393 "histone
binding" evidence=IDA;NAS;TAS] [GO:0016590 "ACF complex"
evidence=IDA] [GO:0006281 "DNA repair" evidence=TAS] [GO:0006334
"nucleosome assembly" evidence=NAS;IDA] [GO:0016573 "histone
acetylation" evidence=ISS;IDA] [GO:0016589 "NURF complex"
evidence=NAS;TAS;IPI] [GO:0035035 "histone acetyltransferase
binding" evidence=ISS;IPI] [GO:0005700 "polytene chromosome"
evidence=IDA] [GO:0042766 "nucleosome mobilization" evidence=IDA]
[GO:0006335 "DNA replication-dependent nucleosome assembly"
evidence=NAS] [GO:0003682 "chromatin binding" evidence=NAS]
[GO:0006342 "chromatin silencing" evidence=IPI] [GO:0006351
"transcription, DNA-dependent" evidence=IDA] [GO:0007346
"regulation of mitotic cell cycle" evidence=IMP] [GO:0046976
"histone methyltransferase activity (H3-K27 specific)" evidence=IC]
[GO:0046974 "histone methyltransferase activity (H3-K9 specific)"
evidence=IC] [GO:0016571 "histone methylation" evidence=IDA]
[GO:0035098 "ESC/E(Z) complex" evidence=IDA] [GO:0007307 "eggshell
chorion gene amplification" evidence=IC] [GO:0031523 "Myb complex"
evidence=IDA] [GO:0005667 "transcription factor complex"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016581 "NuRD complex" evidence=IDA] [GO:0042803 "protein
homodimerization activity" evidence=IPI] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0031491
"nucleosome binding" evidence=IDA] [GO:0042054 "histone
methyltransferase activity" evidence=IDA] [GO:0035097 "histone
methyltransferase complex" evidence=IDA] [GO:0007517 "muscle organ
development" evidence=IMP] [GO:0048813 "dendrite morphogenesis"
evidence=IMP] [GO:0048666 "neuron development" evidence=IMP]
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
[GO:0070822 "Sin3-type complex" evidence=IDA] [GO:0007379 "segment
specification" evidence=IMP] [GO:0008284 "positive regulation of
cell proliferation" evidence=IMP] [GO:0061085 "regulation of
histone H3-K27 methylation" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014297 GO:GO:0007346
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008284 GO:GO:0006281 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0006351
GO:GO:0005667 GO:GO:0000122 GO:GO:0000910 GO:GO:0048813
GO:GO:0007517 GO:GO:0035098 GO:GO:0007379 GO:GO:0006342
GO:GO:0051567 GO:GO:0042393 GO:GO:0005700 GO:GO:0042826
GO:GO:0035035 GO:GO:0042766 GO:GO:0016584 GO:GO:0006334
GO:GO:0016589 GO:GO:0033186 EMBL:U62388 EMBL:AM294392 EMBL:AM294393
EMBL:AM294394 EMBL:AM294395 EMBL:AM294396 EMBL:AM294397
EMBL:AM294398 EMBL:AM294399 EMBL:AM294400 EMBL:AM294401
EMBL:AM294402 EMBL:AM294403 EMBL:AY061408 RefSeq:NP_524354.1
UniGene:Dm.1657 PDB:2XYI PDB:2YB8 PDB:2YBA PDB:3C99 PDB:3C9C
PDBsum:2XYI PDBsum:2YB8 PDBsum:2YBA PDBsum:3C99 PDBsum:3C9C
ProteinModelPortal:Q24572 SMR:Q24572 DIP:DIP-23697N IntAct:Q24572
MINT:MINT-252601 STRING:Q24572 PaxDb:Q24572 PRIDE:Q24572
EnsemblMetazoa:FBtr0083052 GeneID:41836 KEGG:dme:Dmel_CG4236
CTD:41836 FlyBase:FBgn0263347 GeneTree:ENSGT00570000079069
InParanoid:Q24572 KO:K10752 OMA:CQPDLRL OrthoDB:EOG4ZCRKP
PhylomeDB:Q24572 EvolutionaryTrace:Q24572 GenomeRNAi:41836
NextBio:825799 Bgee:Q24572 GermOnline:CG4236 GO:GO:0031523
GO:GO:0016581 GO:GO:0070822 GO:GO:0007307 GO:GO:0070734
InterPro:IPR022052 Pfam:PF12265 Uniprot:Q24572
Length = 430
Score = 900 (321.9 bits), Expect = 3.5e-105, Sum P(2) = 3.5e-105
Identities = 164/170 (96%), Positives = 169/170 (99%)
Query: 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166
+DVAWHLLHESLFGSVADDQKLMIWDTR++N SKPSHTVDAHTAEVNCLSFNPYSE+ILA
Sbjct: 235 EDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILA 294
Query: 167 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI
Sbjct: 295 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 354
Query: 227 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276
GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW+ICSVSEDNIMQ
Sbjct: 355 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQ 404
Score = 161 (61.7 bits), Expect = 3.5e-105, Sum P(2) = 3.5e-105
Identities = 30/34 (88%), Positives = 32/34 (94%)
Query: 43 AEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNN 76
AE FDDAVEERVINEEYKIWKKNTPFLYDLV+ +
Sbjct: 9 AESFDDAVEERVINEEYKIWKKNTPFLYDLVMTH 42
Score = 139 (54.0 bits), Expect = 5.5e-19, Sum P(2) = 5.5e-19
Identities = 29/112 (25%), Positives = 58/112 (51%)
Query: 121 SVADDQKLMIWDT----RSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVAL 176
S +DD + +WD + H V + HTA V ++++ E + + + D+ + +
Sbjct: 199 SASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMI 258
Query: 177 WDLRNLKLKL--HSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
WD RN H+ ++H E+ + ++P++E ILA+ D+ + +WDL +
Sbjct: 259 WDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL 310
Score = 114 (45.2 bits), Expect = 2.2e-16, Sum P(2) = 2.2e-16
Identities = 27/123 (21%), Positives = 60/123 (48%)
Query: 116 ESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVA 175
E + + + D+ + +WD R N+ H+ ++H E+ + ++P++E ILA+ D+ +
Sbjct: 290 EFILATGSADKTVALWDLR--NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLH 347
Query: 176 LWDLRNLKLKLHSFES-------------HKDEIFQVQWSPHNETILASSGTDRRLHVWD 222
+WDL + + + ++ H +I W+P+ I+ S D + VW
Sbjct: 348 VWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQ 407
Query: 223 LSK 225
+++
Sbjct: 408 MAE 410
Score = 112 (44.5 bits), Expect = 3.6e-16, Sum P(2) = 3.6e-16
Identities = 35/140 (25%), Positives = 59/140 (42%)
Query: 140 KPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHS-------FESH 192
+P + H E LS+NP L + S D T+ LWD+ N K H F H
Sbjct: 172 QPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDI-NATPKEHRVIDAKNIFTGH 230
Query: 193 KDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAK 252
+ V W +E++ S D++L +WD + + + HTA+
Sbjct: 231 TAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVD-----------AHTAE 279
Query: 253 ISDFSWNPNEPWVICSVSED 272
++ S+NP +++ + S D
Sbjct: 280 VNCLSFNPYSEFILATGSAD 299
Score = 109 (43.4 bits), Expect = 7.3e-16, Sum P(2) = 7.3e-16
Identities = 34/148 (22%), Positives = 66/148 (44%)
Query: 148 HTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHS---------FESHKDEIFQ 198
H EVN + P + ++AT + V ++D K H+ E +
Sbjct: 127 HEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYG 186
Query: 199 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 258
+ W+P+ L S+ D + +WD++ +E DA++ I GHTA + D +W
Sbjct: 187 LSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKN-------IFTGHTAVVEDVAW 239
Query: 259 NPNEPWVICSVSEDNIMQEYCDSTDSDT 286
+ + SV++D + + D+ +++T
Sbjct: 240 HLLHESLFGSVADDQKLMIW-DTRNNNT 266
Score = 84 (34.6 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 22/91 (24%), Positives = 44/91 (48%)
Query: 183 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPEL 242
K+++ +H+ E+ + ++ P N ++A+ + V+D +K E + + P+L
Sbjct: 118 KIEIEIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTK--HPSKPEPSGECQPDL 175
Query: 243 LFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
GH + SWNPN + S S+D+
Sbjct: 176 RL--RGHQKEGYGLSWNPNLNGYLLSASDDH 204
Score = 79 (32.9 bits), Expect = 9.5e-13, Sum P(2) = 9.5e-13
Identities = 21/84 (25%), Positives = 39/84 (46%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDA-------------HTAEVNCL 155
V W +E++ S D++L +WD + + T DA HTA+++
Sbjct: 327 VQWSPHNETILASSGTDRRLHVWDLSK--IGEEQSTEDAEDGPPELLFIHGGHTAKISDF 384
Query: 156 SFNPYSEYILATGSADKTVALWDL 179
S+NP +I+ + S D + +W +
Sbjct: 385 SWNPNEPWIICSVSEDNIMQVWQM 408
Score = 42 (19.8 bits), Expect = 6.4e-09, Sum P(2) = 6.4e-09
Identities = 9/46 (19%), Positives = 19/46 (41%)
Query: 108 DVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVN 153
D +W+ + SV++D + +W + + + A E N
Sbjct: 383 DFSWNPNEPWIICSVSEDNIMQVWQMAENVYNDEEPEIPASELETN 428
>ZFIN|ZDB-GENE-030131-848 [details] [associations]
symbol:rbb4l "retinoblastoma binding protein 4,
like" species:7955 "Danio rerio" [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-030131-848 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0035098
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 HOGENOM:HOG000160330 HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC052110 EMBL:BC067546 IPI:IPI00996854
RefSeq:NP_997775.1 UniGene:Dr.75908 ProteinModelPortal:Q7ZTY4
SMR:Q7ZTY4 STRING:Q7ZTY4 PRIDE:Q7ZTY4 Ensembl:ENSDART00000008144
GeneID:322129 KEGG:dre:322129 CTD:322129 NextBio:20807686
ArrayExpress:Q7ZTY4 Bgee:Q7ZTY4 Uniprot:Q7ZTY4
Length = 426
Score = 885 (316.6 bits), Expect = 9.5e-103, Sum P(2) = 9.5e-103
Identities = 162/170 (95%), Positives = 168/170 (98%)
Query: 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166
+DV+WHLLHESLFGSVADDQKLMIWDTRS+N SKPSH+VDAHTAEVNCLSFNPYSE+ILA
Sbjct: 231 EDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILA 290
Query: 167 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRL+VWDLSKI
Sbjct: 291 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKI 350
Query: 227 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276
GEEQS EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ
Sbjct: 351 GEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 400
Score = 153 (58.9 bits), Expect = 9.5e-103, Sum P(2) = 9.5e-103
Identities = 28/33 (84%), Positives = 31/33 (93%)
Query: 44 EPFDDAVEERVINEEYKIWKKNTPFLYDLVVNN 76
E +DDAVEERVINEEYKIWKKNTPFLYDLV+ +
Sbjct: 5 EVYDDAVEERVINEEYKIWKKNTPFLYDLVMTH 37
Score = 136 (52.9 bits), Expect = 9.2e-18, Sum P(2) = 9.2e-18
Identities = 33/114 (28%), Positives = 58/114 (50%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDA------HTAEVNCLSFNPYSEYILATGSADKTV 174
S +DD + +WD K VDA HTA V +S++ E + + + D+ +
Sbjct: 195 SASDDHTICLWDISG--APKEGKIVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKL 252
Query: 175 ALWDLR--NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
+WD R N HS ++H E+ + ++P++E ILA+ D+ + +WDL +
Sbjct: 253 MIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL 306
Score = 113 (44.8 bits), Expect = 2.3e-15, Sum P(2) = 2.3e-15
Identities = 26/123 (21%), Positives = 60/123 (48%)
Query: 116 ESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVA 175
E + + + D+ + +WD R N+ H+ ++H E+ + ++P++E ILA+ D+ +
Sbjct: 286 EFILATGSADKTVALWDLR--NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLN 343
Query: 176 LWDLRNLKLKLHSFES-------------HKDEIFQVQWSPHNETILASSGTDRRLHVWD 222
+WDL + + + ++ H +I W+P+ ++ S D + VW
Sbjct: 344 VWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQ 403
Query: 223 LSK 225
+++
Sbjct: 404 MAE 406
Score = 105 (42.0 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 37/148 (25%), Positives = 63/148 (42%)
Query: 148 HTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHS---------FESHKDEIFQ 198
H EVN + P + I+AT + V +D K H+ E +
Sbjct: 123 HEGEVNRARYMPQNPCIIATKTPTSDVLAFDYTKHPSKPDPSGDCSPDLRLRGHQKEGYG 182
Query: 199 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 258
+ W+P+ L S+ D + +WD+S +E DA+ I GHTA + D SW
Sbjct: 183 LSWNPNLSGNLLSASDDHTICLWDISGAPKEGKIVDAKT-------IFTGHTAVVEDVSW 235
Query: 259 NPNEPWVICSVSEDNIMQEYCDSTDSDT 286
+ + SV++D + + D+ ++T
Sbjct: 236 HLLHESLFGSVADDQKLMIW-DTRSNNT 262
Score = 104 (41.7 bits), Expect = 2.0e-14, Sum P(2) = 2.0e-14
Identities = 33/138 (23%), Positives = 57/138 (41%)
Query: 141 PSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKL--KLHS----FESHKD 194
P + H E LS+NP L + S D T+ LWD+ K+ F H
Sbjct: 169 PDLRLRGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDISGAPKEGKIVDAKTIFTGHTA 228
Query: 195 EIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKIS 254
+ V W +E++ S D++L +WD + + + HTA+++
Sbjct: 229 VVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVD-----------AHTAEVN 277
Query: 255 DFSWNPNEPWVICSVSED 272
S+NP +++ + S D
Sbjct: 278 CLSFNPYSEFILATGSAD 295
Score = 80 (33.2 bits), Expect = 6.0e-12, Sum P(2) = 6.0e-12
Identities = 22/91 (24%), Positives = 43/91 (47%)
Query: 183 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPEL 242
K+++ +H+ E+ + ++ P N I+A+ + +D +K + + D P+L
Sbjct: 114 KIEIEIKINHEGEVNRARYMPQNPCIIATKTPTSDVLAFDYTK--HPSKPDPSGDCSPDL 171
Query: 243 LFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
GH + SWNPN + S S+D+
Sbjct: 172 RL--RGHQKEGYGLSWNPNLSGNLLSASDDH 200
Score = 75 (31.5 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 17/82 (20%), Positives = 37/82 (45%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVD-----------AHTAEVNCLSF 157
V W +E++ S D++L +WD + + + HTA+++ S+
Sbjct: 323 VQWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSW 382
Query: 158 NPYSEYILATGSADKTVALWDL 179
NP +++ + S D + +W +
Sbjct: 383 NPNEPWVICSVSEDNIMQVWQM 404
>UNIPROTKB|Q9W7I5 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9031
"Gallus gallus" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0033186
"CAF-1 complex" evidence=ISS] [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006338
"chromatin remodeling" evidence=ISS] [GO:0008094 "DNA-dependent
ATPase activity" evidence=ISS] [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338
GO:GO:0007049 GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330 CTD:5928
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:AF097750 IPI:IPI00592914
RefSeq:NP_990183.1 UniGene:Gga.1029 ProteinModelPortal:Q9W7I5
SMR:Q9W7I5 STRING:Q9W7I5 PRIDE:Q9W7I5 GeneID:395658 KEGG:gga:395658
InParanoid:Q9W7I5 NextBio:20815730 Uniprot:Q9W7I5
Length = 425
Score = 884 (316.2 bits), Expect = 1.2e-102, Sum P(2) = 1.2e-102
Identities = 162/170 (95%), Positives = 168/170 (98%)
Query: 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166
+DV+WHLLHESLFGSVADDQKLMIWDTRS+N SKPSH+VDAHTAEVNCLSFNPYSE+ILA
Sbjct: 231 EDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILA 290
Query: 167 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRL+VWDLSKI
Sbjct: 291 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKI 350
Query: 227 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276
GEEQS EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ
Sbjct: 351 GEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 400
Score = 153 (58.9 bits), Expect = 1.2e-102, Sum P(2) = 1.2e-102
Identities = 28/31 (90%), Positives = 30/31 (96%)
Query: 46 FDDAVEERVINEEYKIWKKNTPFLYDLVVNN 76
FDDAVEERVINEEYKIWKKNTPFLYDLV+ +
Sbjct: 8 FDDAVEERVINEEYKIWKKNTPFLYDLVMTH 38
Score = 142 (55.0 bits), Expect = 2.2e-18, Sum P(2) = 2.2e-18
Identities = 34/114 (29%), Positives = 60/114 (52%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDA------HTAEVNCLSFNPYSEYILATGSADKTV 174
S +DD + +WD + V K VDA HTA V +S++ E + + + D+ +
Sbjct: 195 SASDDHTICLWDISA--VPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKL 252
Query: 175 ALWDLR--NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
+WD R N HS ++H E+ + ++P++E ILA+ D+ + +WDL +
Sbjct: 253 MIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL 306
Score = 121 (47.7 bits), Expect = 3.3e-16, Sum P(2) = 3.3e-16
Identities = 32/140 (22%), Positives = 66/140 (47%)
Query: 116 ESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVA 175
E + + + D+ + +WD R N+ H+ ++H E+ + ++P++E ILA+ D+ +
Sbjct: 286 EFILATGSADKTVALWDLR--NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLN 343
Query: 176 LWDLRNLKLK-------------LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWD 222
+WDL + + L H +I W+P+ ++ S D + VW
Sbjct: 344 VWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQ 403
Query: 223 LSK-IGEEQSTEDAEDGPPE 241
+++ I ++ E + D PE
Sbjct: 404 MAENINNDEDPEGSVD--PE 421
Score = 114 (45.2 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 37/148 (25%), Positives = 65/148 (43%)
Query: 148 HTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHS---------FESHKDEIFQ 198
H EVN + P + I+AT + V ++D K H+ E +
Sbjct: 123 HEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYG 182
Query: 199 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 258
+ W+P+ L S+ D + +WD+S + +E DA+ I GHTA + D SW
Sbjct: 183 LSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKT-------IFTGHTAVVEDVSW 235
Query: 259 NPNEPWVICSVSEDNIMQEYCDSTDSDT 286
+ + SV++D + + D+ ++T
Sbjct: 236 HLLHESLFGSVADDQKLMIW-DTRSNNT 262
Score = 103 (41.3 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 33/138 (23%), Positives = 58/138 (42%)
Query: 141 PSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKL--KLHS----FESHKD 194
P + H E LS+NP L + S D T+ LWD+ + K+ F H
Sbjct: 169 PDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTA 228
Query: 195 EIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKIS 254
+ V W +E++ S D++L +WD + + + HTA+++
Sbjct: 229 VVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVD-----------AHTAEVN 277
Query: 255 DFSWNPNEPWVICSVSED 272
S+NP +++ + S D
Sbjct: 278 CLSFNPYSEFILATGSAD 295
Score = 80 (33.2 bits), Expect = 5.9e-12, Sum P(2) = 5.9e-12
Identities = 19/82 (23%), Positives = 38/82 (46%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWD-TRSHNVSKPSHTVDA----------HTAEVNCLSF 157
V W +E++ S D++L +WD ++ P D HTA+++ S+
Sbjct: 323 VQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSW 382
Query: 158 NPYSEYILATGSADKTVALWDL 179
NP +++ + S D + +W +
Sbjct: 383 NPNEPWVICSVSEDNIMQVWQM 404
Score = 80 (33.2 bits), Expect = 5.9e-12, Sum P(2) = 5.9e-12
Identities = 22/91 (24%), Positives = 44/91 (48%)
Query: 183 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPEL 242
K+++ +H+ E+ + ++ P N I+A+ + V+D +K + + + P+L
Sbjct: 114 KIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTK--HPSKPDPSGECNPDL 171
Query: 243 LFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
GH + SWNPN + S S+D+
Sbjct: 172 RL--RGHQKEGYGLSWNPNLSGHLLSASDDH 200
Score = 42 (19.8 bits), Expect = 5.0e-08, Sum P(2) = 5.0e-08
Identities = 10/41 (24%), Positives = 19/41 (46%)
Query: 108 DVAWHLLHESLFGSVADDQKLMIWDTRSH--NVSKPSHTVD 146
D +W+ + SV++D + +W + N P +VD
Sbjct: 379 DFSWNPNEPWVICSVSEDNIMQVWQMAENINNDEDPEGSVD 419
>UNIPROTKB|F2Z4M0 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9031
"Gallus gallus" [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0016589 "NURF complex"
evidence=IEA] [GO:0031497 "chromatin assembly" evidence=IEA]
[GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0035098 "ESC/E(Z)
complex" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 IPI:IPI00592914
EMBL:AADN02043764 ProteinModelPortal:F2Z4M0 SMR:F2Z4M0 PRIDE:F2Z4M0
Ensembl:ENSGALT00000005575 Uniprot:F2Z4M0
Length = 425
Score = 884 (316.2 bits), Expect = 1.2e-102, Sum P(2) = 1.2e-102
Identities = 162/170 (95%), Positives = 168/170 (98%)
Query: 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166
+DV+WHLLHESLFGSVADDQKLMIWDTRS+N SKPSH+VDAHTAEVNCLSFNPYSE+ILA
Sbjct: 231 EDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILA 290
Query: 167 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRL+VWDLSKI
Sbjct: 291 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKI 350
Query: 227 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276
GEEQS EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ
Sbjct: 351 GEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 400
Score = 153 (58.9 bits), Expect = 1.2e-102, Sum P(2) = 1.2e-102
Identities = 28/31 (90%), Positives = 30/31 (96%)
Query: 46 FDDAVEERVINEEYKIWKKNTPFLYDLVVNN 76
FDDAVEERVINEEYKIWKKNTPFLYDLV+ +
Sbjct: 8 FDDAVEERVINEEYKIWKKNTPFLYDLVMTH 38
Score = 142 (55.0 bits), Expect = 2.2e-18, Sum P(2) = 2.2e-18
Identities = 34/114 (29%), Positives = 60/114 (52%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDA------HTAEVNCLSFNPYSEYILATGSADKTV 174
S +DD + +WD + V K VDA HTA V +S++ E + + + D+ +
Sbjct: 195 SASDDHTICLWDISA--VPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKL 252
Query: 175 ALWDLR--NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
+WD R N HS ++H E+ + ++P++E ILA+ D+ + +WDL +
Sbjct: 253 MIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL 306
Score = 118 (46.6 bits), Expect = 6.8e-16, Sum P(2) = 6.8e-16
Identities = 32/140 (22%), Positives = 66/140 (47%)
Query: 116 ESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVA 175
E + + + D+ + +WD R N+ H+ ++H E+ + ++P++E ILA+ D+ +
Sbjct: 286 EFILATGSADKTVALWDLR--NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLN 343
Query: 176 LWDLRNLKLK-------------LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWD 222
+WDL + + L H +I W+P+ ++ S D + VW
Sbjct: 344 VWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQ 403
Query: 223 LSK-IGEEQSTEDAEDGPPE 241
+++ I ++ E + D PE
Sbjct: 404 MAENIYNDEDPEGSVD--PE 421
Score = 114 (45.2 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 37/148 (25%), Positives = 65/148 (43%)
Query: 148 HTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHS---------FESHKDEIFQ 198
H EVN + P + I+AT + V ++D K H+ E +
Sbjct: 123 HEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYG 182
Query: 199 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 258
+ W+P+ L S+ D + +WD+S + +E DA+ I GHTA + D SW
Sbjct: 183 LSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKT-------IFTGHTAVVEDVSW 235
Query: 259 NPNEPWVICSVSEDNIMQEYCDSTDSDT 286
+ + SV++D + + D+ ++T
Sbjct: 236 HLLHESLFGSVADDQKLMIW-DTRSNNT 262
Score = 103 (41.3 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 33/138 (23%), Positives = 58/138 (42%)
Query: 141 PSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKL--KLHS----FESHKD 194
P + H E LS+NP L + S D T+ LWD+ + K+ F H
Sbjct: 169 PDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTA 228
Query: 195 EIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKIS 254
+ V W +E++ S D++L +WD + + + HTA+++
Sbjct: 229 VVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVD-----------AHTAEVN 277
Query: 255 DFSWNPNEPWVICSVSED 272
S+NP +++ + S D
Sbjct: 278 CLSFNPYSEFILATGSAD 295
Score = 80 (33.2 bits), Expect = 5.9e-12, Sum P(2) = 5.9e-12
Identities = 19/82 (23%), Positives = 38/82 (46%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWD-TRSHNVSKPSHTVDA----------HTAEVNCLSF 157
V W +E++ S D++L +WD ++ P D HTA+++ S+
Sbjct: 323 VQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSW 382
Query: 158 NPYSEYILATGSADKTVALWDL 179
NP +++ + S D + +W +
Sbjct: 383 NPNEPWVICSVSEDNIMQVWQM 404
Score = 80 (33.2 bits), Expect = 5.9e-12, Sum P(2) = 5.9e-12
Identities = 22/91 (24%), Positives = 44/91 (48%)
Query: 183 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPEL 242
K+++ +H+ E+ + ++ P N I+A+ + V+D +K + + + P+L
Sbjct: 114 KIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTK--HPSKPDPSGECNPDL 171
Query: 243 LFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
GH + SWNPN + S S+D+
Sbjct: 172 RL--RGHQKEGYGLSWNPNLSGHLLSASDDH 200
Score = 43 (20.2 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 10/41 (24%), Positives = 19/41 (46%)
Query: 108 DVAWHLLHESLFGSVADDQKLMIWDTRS--HNVSKPSHTVD 146
D +W+ + SV++D + +W +N P +VD
Sbjct: 379 DFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSVD 419
>UNIPROTKB|Q3MHL3 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9913
"Bos taurus" [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0016581
"NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0006338 GO:GO:0007049 GO:GO:0035098 GO:GO:0031497
GO:GO:0016589 GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752
OMA:CQPDLRL GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265
GO:GO:0008094 HOGENOM:HOG000160330 EMBL:BT030530 EMBL:BC105195
IPI:IPI00717704 RefSeq:NP_001070481.1 UniGene:Bt.101874
ProteinModelPortal:Q3MHL3 SMR:Q3MHL3 STRING:Q3MHL3 PRIDE:Q3MHL3
Ensembl:ENSBTAT00000007758 GeneID:767940 KEGG:bta:767940 CTD:5928
HOVERGEN:HBG053236 InParanoid:Q3MHL3 OrthoDB:EOG4DBTDH
NextBio:20918297 Uniprot:Q3MHL3
Length = 425
Score = 884 (316.2 bits), Expect = 1.2e-102, Sum P(2) = 1.2e-102
Identities = 162/170 (95%), Positives = 168/170 (98%)
Query: 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166
+DV+WHLLHESLFGSVADDQKLMIWDTRS+N SKPSH+VDAHTAEVNCLSFNPYSE+ILA
Sbjct: 231 EDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILA 290
Query: 167 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRL+VWDLSKI
Sbjct: 291 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKI 350
Query: 227 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276
GEEQS EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ
Sbjct: 351 GEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 400
Score = 153 (58.9 bits), Expect = 1.2e-102, Sum P(2) = 1.2e-102
Identities = 28/31 (90%), Positives = 30/31 (96%)
Query: 46 FDDAVEERVINEEYKIWKKNTPFLYDLVVNN 76
FDDAVEERVINEEYKIWKKNTPFLYDLV+ +
Sbjct: 8 FDDAVEERVINEEYKIWKKNTPFLYDLVMTH 38
Score = 142 (55.0 bits), Expect = 2.2e-18, Sum P(2) = 2.2e-18
Identities = 34/114 (29%), Positives = 60/114 (52%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDA------HTAEVNCLSFNPYSEYILATGSADKTV 174
S +DD + +WD + V K VDA HTA V +S++ E + + + D+ +
Sbjct: 195 SASDDHTICLWDISA--VPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKL 252
Query: 175 ALWDLR--NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
+WD R N HS ++H E+ + ++P++E ILA+ D+ + +WDL +
Sbjct: 253 MIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL 306
Score = 118 (46.6 bits), Expect = 6.8e-16, Sum P(2) = 6.8e-16
Identities = 32/140 (22%), Positives = 66/140 (47%)
Query: 116 ESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVA 175
E + + + D+ + +WD R N+ H+ ++H E+ + ++P++E ILA+ D+ +
Sbjct: 286 EFILATGSADKTVALWDLR--NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLN 343
Query: 176 LWDLRNLKLK-------------LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWD 222
+WDL + + L H +I W+P+ ++ S D + VW
Sbjct: 344 VWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQ 403
Query: 223 LSK-IGEEQSTEDAEDGPPE 241
+++ I ++ E + D PE
Sbjct: 404 MAENIYNDEDPEGSVD--PE 421
Score = 114 (45.2 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 37/148 (25%), Positives = 65/148 (43%)
Query: 148 HTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHS---------FESHKDEIFQ 198
H EVN + P + I+AT + V ++D K H+ E +
Sbjct: 123 HEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYG 182
Query: 199 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 258
+ W+P+ L S+ D + +WD+S + +E DA+ I GHTA + D SW
Sbjct: 183 LSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKT-------IFTGHTAVVEDVSW 235
Query: 259 NPNEPWVICSVSEDNIMQEYCDSTDSDT 286
+ + SV++D + + D+ ++T
Sbjct: 236 HLLHESLFGSVADDQKLMIW-DTRSNNT 262
Score = 103 (41.3 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 33/138 (23%), Positives = 58/138 (42%)
Query: 141 PSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKL--KLHS----FESHKD 194
P + H E LS+NP L + S D T+ LWD+ + K+ F H
Sbjct: 169 PDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTA 228
Query: 195 EIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKIS 254
+ V W +E++ S D++L +WD + + + HTA+++
Sbjct: 229 VVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVD-----------AHTAEVN 277
Query: 255 DFSWNPNEPWVICSVSED 272
S+NP +++ + S D
Sbjct: 278 CLSFNPYSEFILATGSAD 295
Score = 80 (33.2 bits), Expect = 5.9e-12, Sum P(2) = 5.9e-12
Identities = 19/82 (23%), Positives = 38/82 (46%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWD-TRSHNVSKPSHTVDA----------HTAEVNCLSF 157
V W +E++ S D++L +WD ++ P D HTA+++ S+
Sbjct: 323 VQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSW 382
Query: 158 NPYSEYILATGSADKTVALWDL 179
NP +++ + S D + +W +
Sbjct: 383 NPNEPWVICSVSEDNIMQVWQM 404
Score = 80 (33.2 bits), Expect = 5.9e-12, Sum P(2) = 5.9e-12
Identities = 22/91 (24%), Positives = 44/91 (48%)
Query: 183 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPEL 242
K+++ +H+ E+ + ++ P N I+A+ + V+D +K + + + P+L
Sbjct: 114 KIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTK--HPSKPDPSGECNPDL 171
Query: 243 LFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
GH + SWNPN + S S+D+
Sbjct: 172 RL--RGHQKEGYGLSWNPNLSGHLLSASDDH 200
Score = 43 (20.2 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 10/41 (24%), Positives = 19/41 (46%)
Query: 108 DVAWHLLHESLFGSVADDQKLMIWDTRS--HNVSKPSHTVD 146
D +W+ + SV++D + +W +N P +VD
Sbjct: 379 DFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSVD 419
>UNIPROTKB|E2QXR8 [details] [associations]
symbol:RBBP4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0035098 "ESC/E(Z) complex" evidence=IEA]
[GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0031497 "chromatin
assembly" evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 KO:K10752 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 CTD:5928
EMBL:AAEX03001654 RefSeq:XP_864445.1 ProteinModelPortal:E2QXR8
SMR:E2QXR8 PRIDE:E2QXR8 Ensembl:ENSCAFT00000016755 GeneID:478149
KEGG:cfa:478149 NextBio:20853518 Uniprot:E2QXR8
Length = 425
Score = 884 (316.2 bits), Expect = 1.2e-102, Sum P(2) = 1.2e-102
Identities = 162/170 (95%), Positives = 168/170 (98%)
Query: 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166
+DV+WHLLHESLFGSVADDQKLMIWDTRS+N SKPSH+VDAHTAEVNCLSFNPYSE+ILA
Sbjct: 231 EDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILA 290
Query: 167 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRL+VWDLSKI
Sbjct: 291 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKI 350
Query: 227 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276
GEEQS EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ
Sbjct: 351 GEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 400
Score = 153 (58.9 bits), Expect = 1.2e-102, Sum P(2) = 1.2e-102
Identities = 28/31 (90%), Positives = 30/31 (96%)
Query: 46 FDDAVEERVINEEYKIWKKNTPFLYDLVVNN 76
FDDAVEERVINEEYKIWKKNTPFLYDLV+ +
Sbjct: 8 FDDAVEERVINEEYKIWKKNTPFLYDLVMTH 38
Score = 142 (55.0 bits), Expect = 2.2e-18, Sum P(2) = 2.2e-18
Identities = 34/114 (29%), Positives = 60/114 (52%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDA------HTAEVNCLSFNPYSEYILATGSADKTV 174
S +DD + +WD + V K VDA HTA V +S++ E + + + D+ +
Sbjct: 195 SASDDHTICLWDISA--VPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKL 252
Query: 175 ALWDLR--NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
+WD R N HS ++H E+ + ++P++E ILA+ D+ + +WDL +
Sbjct: 253 MIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL 306
Score = 118 (46.6 bits), Expect = 6.8e-16, Sum P(2) = 6.8e-16
Identities = 32/140 (22%), Positives = 66/140 (47%)
Query: 116 ESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVA 175
E + + + D+ + +WD R N+ H+ ++H E+ + ++P++E ILA+ D+ +
Sbjct: 286 EFILATGSADKTVALWDLR--NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLN 343
Query: 176 LWDLRNLKLK-------------LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWD 222
+WDL + + L H +I W+P+ ++ S D + VW
Sbjct: 344 VWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQ 403
Query: 223 LSK-IGEEQSTEDAEDGPPE 241
+++ I ++ E + D PE
Sbjct: 404 MAENIYNDEDPEGSVD--PE 421
Score = 114 (45.2 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 37/148 (25%), Positives = 65/148 (43%)
Query: 148 HTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHS---------FESHKDEIFQ 198
H EVN + P + I+AT + V ++D K H+ E +
Sbjct: 123 HEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYG 182
Query: 199 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 258
+ W+P+ L S+ D + +WD+S + +E DA+ I GHTA + D SW
Sbjct: 183 LSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKT-------IFTGHTAVVEDVSW 235
Query: 259 NPNEPWVICSVSEDNIMQEYCDSTDSDT 286
+ + SV++D + + D+ ++T
Sbjct: 236 HLLHESLFGSVADDQKLMIW-DTRSNNT 262
Score = 103 (41.3 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 33/138 (23%), Positives = 58/138 (42%)
Query: 141 PSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKL--KLHS----FESHKD 194
P + H E LS+NP L + S D T+ LWD+ + K+ F H
Sbjct: 169 PDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTA 228
Query: 195 EIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKIS 254
+ V W +E++ S D++L +WD + + + HTA+++
Sbjct: 229 VVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVD-----------AHTAEVN 277
Query: 255 DFSWNPNEPWVICSVSED 272
S+NP +++ + S D
Sbjct: 278 CLSFNPYSEFILATGSAD 295
Score = 80 (33.2 bits), Expect = 5.9e-12, Sum P(2) = 5.9e-12
Identities = 19/82 (23%), Positives = 38/82 (46%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWD-TRSHNVSKPSHTVDA----------HTAEVNCLSF 157
V W +E++ S D++L +WD ++ P D HTA+++ S+
Sbjct: 323 VQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSW 382
Query: 158 NPYSEYILATGSADKTVALWDL 179
NP +++ + S D + +W +
Sbjct: 383 NPNEPWVICSVSEDNIMQVWQM 404
Score = 80 (33.2 bits), Expect = 5.9e-12, Sum P(2) = 5.9e-12
Identities = 22/91 (24%), Positives = 44/91 (48%)
Query: 183 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPEL 242
K+++ +H+ E+ + ++ P N I+A+ + V+D +K + + + P+L
Sbjct: 114 KIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTK--HPSKPDPSGECNPDL 171
Query: 243 LFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
GH + SWNPN + S S+D+
Sbjct: 172 RL--RGHQKEGYGLSWNPNLSGHLLSASDDH 200
Score = 43 (20.2 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 10/41 (24%), Positives = 19/41 (46%)
Query: 108 DVAWHLLHESLFGSVADDQKLMIWDTRS--HNVSKPSHTVD 146
D +W+ + SV++D + +W +N P +VD
Sbjct: 379 DFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSVD 419
>UNIPROTKB|Q09028 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016581 "NuRD complex" evidence=NAS;IDA] [GO:0016589 "NURF
complex" evidence=IDA] [GO:0035098 "ESC/E(Z) complex" evidence=IDA]
[GO:0033186 "CAF-1 complex" evidence=IDA] [GO:0031497 "chromatin
assembly" evidence=IDA] [GO:0008285 "negative regulation of cell
proliferation" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=IDA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IDA] [GO:0000278 "mitotic
cell cycle" evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006334 "nucleosome assembly" evidence=TAS] [GO:0034080 "CENP-A
containing nucleosome assembly at centromere" evidence=TAS]
[GO:0016580 "Sin3 complex" evidence=NAS] [GO:0042393 "histone
binding" evidence=NAS] [GO:0042826 "histone deacetylase binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Pathway_Interaction_DB:telomerasepathway
Reactome:REACT_115566 GO:GO:0008285 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CH471059 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035098
GO:GO:0042393 Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0034080
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0000278
GO:GO:0016589 GO:GO:0033186 KO:K10752 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0016580 PDB:2XU7 PDBsum:2XU7
CTD:5928 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:X74262
EMBL:X71810 EMBL:BT007309 EMBL:AK299251 EMBL:AK312571 EMBL:AK222779
EMBL:AC114489 EMBL:BC003092 EMBL:BC015123 EMBL:BC053904
EMBL:BC075836 IPI:IPI00328319 IPI:IPI00645329 IPI:IPI00877802
IPI:IPI00877934 PIR:S36112 RefSeq:NP_001128727.1
RefSeq:NP_001128728.1 RefSeq:NP_005601.1 UniGene:Hs.16003 PDB:3GFC
PDBsum:3GFC ProteinModelPortal:Q09028 SMR:Q09028 DIP:DIP-33495N
IntAct:Q09028 MINT:MINT-90543 STRING:Q09028 PhosphoSite:Q09028
DMDM:1172846 PaxDb:Q09028 PRIDE:Q09028 DNASU:5928
Ensembl:ENST00000373485 Ensembl:ENST00000373493
Ensembl:ENST00000414241 Ensembl:ENST00000458695 GeneID:5928
KEGG:hsa:5928 UCSC:uc001bvr.3 UCSC:uc001bvs.3 GeneCards:GC01P033116
HGNC:HGNC:9887 HPA:CAB006264 MIM:602923 neXtProt:NX_Q09028
PharmGKB:PA34251 InParanoid:Q09028 PhylomeDB:Q09028 ChiTaRS:RBBP4
EvolutionaryTrace:Q09028 GenomeRNAi:5928 NextBio:23094
ArrayExpress:Q09028 Bgee:Q09028 CleanEx:HS_RBBP4
Genevestigator:Q09028 GermOnline:ENSG00000162521 Uniprot:Q09028
Length = 425
Score = 884 (316.2 bits), Expect = 1.2e-102, Sum P(2) = 1.2e-102
Identities = 162/170 (95%), Positives = 168/170 (98%)
Query: 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166
+DV+WHLLHESLFGSVADDQKLMIWDTRS+N SKPSH+VDAHTAEVNCLSFNPYSE+ILA
Sbjct: 231 EDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILA 290
Query: 167 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRL+VWDLSKI
Sbjct: 291 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKI 350
Query: 227 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276
GEEQS EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ
Sbjct: 351 GEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 400
Score = 153 (58.9 bits), Expect = 1.2e-102, Sum P(2) = 1.2e-102
Identities = 28/31 (90%), Positives = 30/31 (96%)
Query: 46 FDDAVEERVINEEYKIWKKNTPFLYDLVVNN 76
FDDAVEERVINEEYKIWKKNTPFLYDLV+ +
Sbjct: 8 FDDAVEERVINEEYKIWKKNTPFLYDLVMTH 38
Score = 142 (55.0 bits), Expect = 2.2e-18, Sum P(2) = 2.2e-18
Identities = 34/114 (29%), Positives = 60/114 (52%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDA------HTAEVNCLSFNPYSEYILATGSADKTV 174
S +DD + +WD + V K VDA HTA V +S++ E + + + D+ +
Sbjct: 195 SASDDHTICLWDISA--VPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKL 252
Query: 175 ALWDLR--NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
+WD R N HS ++H E+ + ++P++E ILA+ D+ + +WDL +
Sbjct: 253 MIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL 306
Score = 118 (46.6 bits), Expect = 6.8e-16, Sum P(2) = 6.8e-16
Identities = 32/140 (22%), Positives = 66/140 (47%)
Query: 116 ESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVA 175
E + + + D+ + +WD R N+ H+ ++H E+ + ++P++E ILA+ D+ +
Sbjct: 286 EFILATGSADKTVALWDLR--NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLN 343
Query: 176 LWDLRNLKLK-------------LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWD 222
+WDL + + L H +I W+P+ ++ S D + VW
Sbjct: 344 VWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQ 403
Query: 223 LSK-IGEEQSTEDAEDGPPE 241
+++ I ++ E + D PE
Sbjct: 404 MAENIYNDEDPEGSVD--PE 421
Score = 114 (45.2 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 37/148 (25%), Positives = 65/148 (43%)
Query: 148 HTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHS---------FESHKDEIFQ 198
H EVN + P + I+AT + V ++D K H+ E +
Sbjct: 123 HEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYG 182
Query: 199 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 258
+ W+P+ L S+ D + +WD+S + +E DA+ I GHTA + D SW
Sbjct: 183 LSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKT-------IFTGHTAVVEDVSW 235
Query: 259 NPNEPWVICSVSEDNIMQEYCDSTDSDT 286
+ + SV++D + + D+ ++T
Sbjct: 236 HLLHESLFGSVADDQKLMIW-DTRSNNT 262
Score = 103 (41.3 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 33/138 (23%), Positives = 58/138 (42%)
Query: 141 PSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKL--KLHS----FESHKD 194
P + H E LS+NP L + S D T+ LWD+ + K+ F H
Sbjct: 169 PDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTA 228
Query: 195 EIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKIS 254
+ V W +E++ S D++L +WD + + + HTA+++
Sbjct: 229 VVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVD-----------AHTAEVN 277
Query: 255 DFSWNPNEPWVICSVSED 272
S+NP +++ + S D
Sbjct: 278 CLSFNPYSEFILATGSAD 295
Score = 80 (33.2 bits), Expect = 5.9e-12, Sum P(2) = 5.9e-12
Identities = 19/82 (23%), Positives = 38/82 (46%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWD-TRSHNVSKPSHTVDA----------HTAEVNCLSF 157
V W +E++ S D++L +WD ++ P D HTA+++ S+
Sbjct: 323 VQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSW 382
Query: 158 NPYSEYILATGSADKTVALWDL 179
NP +++ + S D + +W +
Sbjct: 383 NPNEPWVICSVSEDNIMQVWQM 404
Score = 80 (33.2 bits), Expect = 5.9e-12, Sum P(2) = 5.9e-12
Identities = 22/91 (24%), Positives = 44/91 (48%)
Query: 183 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPEL 242
K+++ +H+ E+ + ++ P N I+A+ + V+D +K + + + P+L
Sbjct: 114 KIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTK--HPSKPDPSGECNPDL 171
Query: 243 LFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
GH + SWNPN + S S+D+
Sbjct: 172 RL--RGHQKEGYGLSWNPNLSGHLLSASDDH 200
Score = 43 (20.2 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 10/41 (24%), Positives = 19/41 (46%)
Query: 108 DVAWHLLHESLFGSVADDQKLMIWDTRS--HNVSKPSHTVD 146
D +W+ + SV++D + +W +N P +VD
Sbjct: 379 DFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSVD 419
>MGI|MGI:1194912 [details] [associations]
symbol:Rbbp4 "retinoblastoma binding protein 4"
species:10090 "Mus musculus" [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=ISO;TAS] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=ISO;IDA] [GO:0016589 "NURF complex" evidence=ISO]
[GO:0031497 "chromatin assembly" evidence=ISO] [GO:0033186 "CAF-1
complex" evidence=ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO;IDA] [GO:0042826 "histone deacetylase binding"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1194912 EMBL:CH466552 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338 GO:GO:0007049
GO:GO:0035098 GO:GO:0031497 EMBL:AL607123 GO:GO:0016589
GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752 OMA:CQPDLRL
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094
HOGENOM:HOG000160330 CTD:5928 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH
EMBL:U35141 EMBL:CU234133 EMBL:BC138568 EMBL:BC138570
IPI:IPI00828412 PIR:I49366 RefSeq:NP_033056.2 UniGene:Mm.12145
ProteinModelPortal:Q60972 SMR:Q60972 DIP:DIP-32855N IntAct:Q60972
STRING:Q60972 PhosphoSite:Q60972 REPRODUCTION-2DPAGE:Q60972
PaxDb:Q60972 PRIDE:Q60972 Ensembl:ENSMUST00000102598 GeneID:19646
KEGG:mmu:19646 InParanoid:A2A875 NextBio:296894 Bgee:Q60972
CleanEx:MM_RBBP4 Genevestigator:Q60972
GermOnline:ENSMUSG00000057236 Uniprot:Q60972
Length = 425
Score = 884 (316.2 bits), Expect = 1.2e-102, Sum P(2) = 1.2e-102
Identities = 162/170 (95%), Positives = 168/170 (98%)
Query: 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166
+DV+WHLLHESLFGSVADDQKLMIWDTRS+N SKPSH+VDAHTAEVNCLSFNPYSE+ILA
Sbjct: 231 EDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILA 290
Query: 167 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRL+VWDLSKI
Sbjct: 291 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKI 350
Query: 227 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276
GEEQS EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ
Sbjct: 351 GEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 400
Score = 153 (58.9 bits), Expect = 1.2e-102, Sum P(2) = 1.2e-102
Identities = 28/31 (90%), Positives = 30/31 (96%)
Query: 46 FDDAVEERVINEEYKIWKKNTPFLYDLVVNN 76
FDDAVEERVINEEYKIWKKNTPFLYDLV+ +
Sbjct: 8 FDDAVEERVINEEYKIWKKNTPFLYDLVMTH 38
Score = 142 (55.0 bits), Expect = 2.2e-18, Sum P(2) = 2.2e-18
Identities = 34/114 (29%), Positives = 60/114 (52%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDA------HTAEVNCLSFNPYSEYILATGSADKTV 174
S +DD + +WD + V K VDA HTA V +S++ E + + + D+ +
Sbjct: 195 SASDDHTICLWDISA--VPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKL 252
Query: 175 ALWDLR--NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
+WD R N HS ++H E+ + ++P++E ILA+ D+ + +WDL +
Sbjct: 253 MIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL 306
Score = 118 (46.6 bits), Expect = 6.8e-16, Sum P(2) = 6.8e-16
Identities = 32/140 (22%), Positives = 66/140 (47%)
Query: 116 ESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVA 175
E + + + D+ + +WD R N+ H+ ++H E+ + ++P++E ILA+ D+ +
Sbjct: 286 EFILATGSADKTVALWDLR--NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLN 343
Query: 176 LWDLRNLKLK-------------LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWD 222
+WDL + + L H +I W+P+ ++ S D + VW
Sbjct: 344 VWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQ 403
Query: 223 LSK-IGEEQSTEDAEDGPPE 241
+++ I ++ E + D PE
Sbjct: 404 MAENIYNDEDPEGSVD--PE 421
Score = 114 (45.2 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 37/148 (25%), Positives = 65/148 (43%)
Query: 148 HTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHS---------FESHKDEIFQ 198
H EVN + P + I+AT + V ++D K H+ E +
Sbjct: 123 HEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYG 182
Query: 199 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 258
+ W+P+ L S+ D + +WD+S + +E DA+ I GHTA + D SW
Sbjct: 183 LSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKT-------IFTGHTAVVEDVSW 235
Query: 259 NPNEPWVICSVSEDNIMQEYCDSTDSDT 286
+ + SV++D + + D+ ++T
Sbjct: 236 HLLHESLFGSVADDQKLMIW-DTRSNNT 262
Score = 103 (41.3 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 33/138 (23%), Positives = 58/138 (42%)
Query: 141 PSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKL--KLHS----FESHKD 194
P + H E LS+NP L + S D T+ LWD+ + K+ F H
Sbjct: 169 PDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTA 228
Query: 195 EIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKIS 254
+ V W +E++ S D++L +WD + + + HTA+++
Sbjct: 229 VVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVD-----------AHTAEVN 277
Query: 255 DFSWNPNEPWVICSVSED 272
S+NP +++ + S D
Sbjct: 278 CLSFNPYSEFILATGSAD 295
Score = 80 (33.2 bits), Expect = 5.9e-12, Sum P(2) = 5.9e-12
Identities = 19/82 (23%), Positives = 38/82 (46%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWD-TRSHNVSKPSHTVDA----------HTAEVNCLSF 157
V W +E++ S D++L +WD ++ P D HTA+++ S+
Sbjct: 323 VQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSW 382
Query: 158 NPYSEYILATGSADKTVALWDL 179
NP +++ + S D + +W +
Sbjct: 383 NPNEPWVICSVSEDNIMQVWQM 404
Score = 80 (33.2 bits), Expect = 5.9e-12, Sum P(2) = 5.9e-12
Identities = 22/91 (24%), Positives = 44/91 (48%)
Query: 183 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPEL 242
K+++ +H+ E+ + ++ P N I+A+ + V+D +K + + + P+L
Sbjct: 114 KIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTK--HPSKPDPSGECNPDL 171
Query: 243 LFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
GH + SWNPN + S S+D+
Sbjct: 172 RL--RGHQKEGYGLSWNPNLSGHLLSASDDH 200
Score = 43 (20.2 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 10/41 (24%), Positives = 19/41 (46%)
Query: 108 DVAWHLLHESLFGSVADDQKLMIWDTRS--HNVSKPSHTVD 146
D +W+ + SV++D + +W +N P +VD
Sbjct: 379 DFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSVD 419
>RGD|1593768 [details] [associations]
symbol:Rbbp4 "retinoblastoma binding protein 4" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0006338
"chromatin remodeling" evidence=IEA;ISO] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA;ISO] [GO:0016581 "NuRD complex"
evidence=IEA;ISO] [GO:0016589 "NURF complex" evidence=IEA;ISO]
[GO:0031497 "chromatin assembly" evidence=IEA;ISO] [GO:0033186
"CAF-1 complex" evidence=IEA;ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=IEA;ISO] [GO:0042826 "histone deacetylase binding"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1593768 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338 GO:GO:0031497
GO:GO:0016589 GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094
EMBL:CH473968 HOGENOM:HOG000160330 CTD:5928 HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC168994 IPI:IPI00366789
RefSeq:NP_001101382.1 UniGene:Rn.224577 SMR:B5DFB2 STRING:B5DFB2
Ensembl:ENSRNOT00000029177 GeneID:313048 KEGG:rno:313048
NextBio:665530 Genevestigator:B5DFB2 Uniprot:B5DFB2
Length = 425
Score = 884 (316.2 bits), Expect = 1.2e-102, Sum P(2) = 1.2e-102
Identities = 162/170 (95%), Positives = 168/170 (98%)
Query: 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166
+DV+WHLLHESLFGSVADDQKLMIWDTRS+N SKPSH+VDAHTAEVNCLSFNPYSE+ILA
Sbjct: 231 EDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILA 290
Query: 167 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRL+VWDLSKI
Sbjct: 291 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKI 350
Query: 227 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276
GEEQS EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ
Sbjct: 351 GEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 400
Score = 153 (58.9 bits), Expect = 1.2e-102, Sum P(2) = 1.2e-102
Identities = 28/31 (90%), Positives = 30/31 (96%)
Query: 46 FDDAVEERVINEEYKIWKKNTPFLYDLVVNN 76
FDDAVEERVINEEYKIWKKNTPFLYDLV+ +
Sbjct: 8 FDDAVEERVINEEYKIWKKNTPFLYDLVMTH 38
Score = 142 (55.0 bits), Expect = 2.2e-18, Sum P(2) = 2.2e-18
Identities = 34/114 (29%), Positives = 60/114 (52%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDA------HTAEVNCLSFNPYSEYILATGSADKTV 174
S +DD + +WD + V K VDA HTA V +S++ E + + + D+ +
Sbjct: 195 SASDDHTICLWDISA--VPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKL 252
Query: 175 ALWDLR--NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
+WD R N HS ++H E+ + ++P++E ILA+ D+ + +WDL +
Sbjct: 253 MIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL 306
Score = 118 (46.6 bits), Expect = 6.8e-16, Sum P(2) = 6.8e-16
Identities = 32/140 (22%), Positives = 66/140 (47%)
Query: 116 ESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVA 175
E + + + D+ + +WD R N+ H+ ++H E+ + ++P++E ILA+ D+ +
Sbjct: 286 EFILATGSADKTVALWDLR--NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLN 343
Query: 176 LWDLRNLKLK-------------LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWD 222
+WDL + + L H +I W+P+ ++ S D + VW
Sbjct: 344 VWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQ 403
Query: 223 LSK-IGEEQSTEDAEDGPPE 241
+++ I ++ E + D PE
Sbjct: 404 MAENIYNDEDPEGSVD--PE 421
Score = 114 (45.2 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 37/148 (25%), Positives = 65/148 (43%)
Query: 148 HTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHS---------FESHKDEIFQ 198
H EVN + P + I+AT + V ++D K H+ E +
Sbjct: 123 HEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYG 182
Query: 199 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 258
+ W+P+ L S+ D + +WD+S + +E DA+ I GHTA + D SW
Sbjct: 183 LSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKT-------IFTGHTAVVEDVSW 235
Query: 259 NPNEPWVICSVSEDNIMQEYCDSTDSDT 286
+ + SV++D + + D+ ++T
Sbjct: 236 HLLHESLFGSVADDQKLMIW-DTRSNNT 262
Score = 103 (41.3 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 33/138 (23%), Positives = 58/138 (42%)
Query: 141 PSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKL--KLHS----FESHKD 194
P + H E LS+NP L + S D T+ LWD+ + K+ F H
Sbjct: 169 PDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTA 228
Query: 195 EIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKIS 254
+ V W +E++ S D++L +WD + + + HTA+++
Sbjct: 229 VVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVD-----------AHTAEVN 277
Query: 255 DFSWNPNEPWVICSVSED 272
S+NP +++ + S D
Sbjct: 278 CLSFNPYSEFILATGSAD 295
Score = 80 (33.2 bits), Expect = 5.9e-12, Sum P(2) = 5.9e-12
Identities = 19/82 (23%), Positives = 38/82 (46%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWD-TRSHNVSKPSHTVDA----------HTAEVNCLSF 157
V W +E++ S D++L +WD ++ P D HTA+++ S+
Sbjct: 323 VQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSW 382
Query: 158 NPYSEYILATGSADKTVALWDL 179
NP +++ + S D + +W +
Sbjct: 383 NPNEPWVICSVSEDNIMQVWQM 404
Score = 80 (33.2 bits), Expect = 5.9e-12, Sum P(2) = 5.9e-12
Identities = 22/91 (24%), Positives = 44/91 (48%)
Query: 183 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPEL 242
K+++ +H+ E+ + ++ P N I+A+ + V+D +K + + + P+L
Sbjct: 114 KIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTK--HPSKPDPSGECNPDL 171
Query: 243 LFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
GH + SWNPN + S S+D+
Sbjct: 172 RL--RGHQKEGYGLSWNPNLSGHLLSASDDH 200
Score = 43 (20.2 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 10/41 (24%), Positives = 19/41 (46%)
Query: 108 DVAWHLLHESLFGSVADDQKLMIWDTRS--HNVSKPSHTVD 146
D +W+ + SV++D + +W +N P +VD
Sbjct: 379 DFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSVD 419
>UNIPROTKB|Q5M7K4 [details] [associations]
symbol:rbbp4 "Histone-binding protein RBBP4" species:8364
"Xenopus (Silurana) tropicalis" [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0016568 GO:GO:0007049 GO:GO:0035098 GO:GO:0031497
GO:GO:0033186 InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:BC088588 UniGene:Str.6093
ProteinModelPortal:Q5M7K4 SMR:Q5M7K4 STRING:Q5M7K4
Xenbase:XB-GENE-482002 InParanoid:Q5M7K4 Uniprot:Q5M7K4
Length = 425
Score = 884 (316.2 bits), Expect = 1.2e-102, Sum P(2) = 1.2e-102
Identities = 162/170 (95%), Positives = 168/170 (98%)
Query: 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166
+DV+WHLLHESLFGSVADDQKLMIWDTRS+N SKPSH+VDAHTAEVNCLSFNPYSE+ILA
Sbjct: 231 EDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILA 290
Query: 167 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRL+VWDLSKI
Sbjct: 291 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKI 350
Query: 227 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276
GEEQS EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ
Sbjct: 351 GEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 400
Score = 153 (58.9 bits), Expect = 1.2e-102, Sum P(2) = 1.2e-102
Identities = 28/31 (90%), Positives = 30/31 (96%)
Query: 46 FDDAVEERVINEEYKIWKKNTPFLYDLVVNN 76
FDDAVEERVINEEYKIWKKNTPFLYDLV+ +
Sbjct: 8 FDDAVEERVINEEYKIWKKNTPFLYDLVMTH 38
Score = 142 (55.0 bits), Expect = 2.2e-18, Sum P(2) = 2.2e-18
Identities = 34/114 (29%), Positives = 60/114 (52%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDA------HTAEVNCLSFNPYSEYILATGSADKTV 174
S +DD + +WD + V K VDA HTA V +S++ E + + + D+ +
Sbjct: 195 SASDDHTICLWDISA--VPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKL 252
Query: 175 ALWDLR--NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
+WD R N HS ++H E+ + ++P++E ILA+ D+ + +WDL +
Sbjct: 253 MIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL 306
Score = 123 (48.4 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
Identities = 33/140 (23%), Positives = 66/140 (47%)
Query: 116 ESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVA 175
E + + + D+ + +WD R N+ H+ ++H E+ + ++P++E ILA+ D+ +
Sbjct: 286 EFILATGSADKTVALWDLR--NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLN 343
Query: 176 LWDLRNLKLK-------------LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWD 222
+WDL + + L H +I W+P+ ++ S D + VW
Sbjct: 344 VWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQ 403
Query: 223 LSK-IGEEQSTEDAEDGPPE 241
+++ I ++ TE D PE
Sbjct: 404 MAENIYNDEDTEGGVD--PE 421
Score = 114 (45.2 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 37/148 (25%), Positives = 65/148 (43%)
Query: 148 HTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHS---------FESHKDEIFQ 198
H EVN + P + I+AT + V ++D K H+ E +
Sbjct: 123 HEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYG 182
Query: 199 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 258
+ W+P+ L S+ D + +WD+S + +E DA+ I GHTA + D SW
Sbjct: 183 LSWNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKT-------IFTGHTAVVEDVSW 235
Query: 259 NPNEPWVICSVSEDNIMQEYCDSTDSDT 286
+ + SV++D + + D+ ++T
Sbjct: 236 HLLHESLFGSVADDQKLMIW-DTRSNNT 262
Score = 103 (41.3 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 33/138 (23%), Positives = 58/138 (42%)
Query: 141 PSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKL--KLHS----FESHKD 194
P + H E LS+NP L + S D T+ LWD+ + K+ F H
Sbjct: 169 PDLRLRGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTA 228
Query: 195 EIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKIS 254
+ V W +E++ S D++L +WD + + + HTA+++
Sbjct: 229 VVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVD-----------AHTAEVN 277
Query: 255 DFSWNPNEPWVICSVSED 272
S+NP +++ + S D
Sbjct: 278 CLSFNPYSEFILATGSAD 295
Score = 80 (33.2 bits), Expect = 5.9e-12, Sum P(2) = 5.9e-12
Identities = 19/82 (23%), Positives = 38/82 (46%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWD-TRSHNVSKPSHTVDA----------HTAEVNCLSF 157
V W +E++ S D++L +WD ++ P D HTA+++ S+
Sbjct: 323 VQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSW 382
Query: 158 NPYSEYILATGSADKTVALWDL 179
NP +++ + S D + +W +
Sbjct: 383 NPNEPWVICSVSEDNIMQVWQM 404
Score = 80 (33.2 bits), Expect = 5.9e-12, Sum P(2) = 5.9e-12
Identities = 22/91 (24%), Positives = 44/91 (48%)
Query: 183 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPEL 242
K+++ +H+ E+ + ++ P N I+A+ + V+D +K + + + P+L
Sbjct: 114 KIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTK--HPSKPDPSGECNPDL 171
Query: 243 LFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
GH + SWNPN + S S+D+
Sbjct: 172 RL--RGHQKEGYGLSWNPNLSGNLLSASDDH 200
Score = 37 (18.1 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 8/37 (21%), Positives = 17/37 (45%)
Query: 108 DVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHT 144
D +W+ + SV++D + +W + N+ T
Sbjct: 379 DFSWNPNEPWVICSVSEDNIMQVWQM-AENIYNDEDT 414
>UNIPROTKB|Q6INH0 [details] [associations]
symbol:rbbp4-b "Histone-binding protein RBBP4-B"
species:8355 "Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0006338 "chromatin remodeling" evidence=ISS] [GO:0031497
"chromatin assembly" evidence=ISS] [GO:0033186 "CAF-1 complex"
evidence=ISS] [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0006338 GO:GO:0007049 GO:GO:0035098
GO:GO:0031497 GO:GO:0033186 KO:K10752 InterPro:IPR022052
Pfam:PF12265 HOVERGEN:HBG053236 EMBL:BC072311 RefSeq:NP_001085185.1
UniGene:Xl.86906 ProteinModelPortal:Q6INH0 SMR:Q6INH0 PRIDE:Q6INH0
DNASU:432269 GeneID:432269 KEGG:xla:432269 CTD:432269
Xenbase:XB-GENE-6255728 Uniprot:Q6INH0
Length = 425
Score = 884 (316.2 bits), Expect = 1.2e-102, Sum P(2) = 1.2e-102
Identities = 162/170 (95%), Positives = 168/170 (98%)
Query: 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166
+DV+WHLLHESLFGSVADDQKLMIWDTRS+N SKPSH+VDAHTAEVNCLSFNPYSE+ILA
Sbjct: 231 EDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILA 290
Query: 167 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRL+VWDLSKI
Sbjct: 291 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKI 350
Query: 227 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276
GEEQS EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ
Sbjct: 351 GEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 400
Score = 153 (58.9 bits), Expect = 1.2e-102, Sum P(2) = 1.2e-102
Identities = 28/31 (90%), Positives = 30/31 (96%)
Query: 46 FDDAVEERVINEEYKIWKKNTPFLYDLVVNN 76
FDDAVEERVINEEYKIWKKNTPFLYDLV+ +
Sbjct: 8 FDDAVEERVINEEYKIWKKNTPFLYDLVMTH 38
Score = 142 (55.0 bits), Expect = 2.2e-18, Sum P(2) = 2.2e-18
Identities = 34/114 (29%), Positives = 60/114 (52%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDA------HTAEVNCLSFNPYSEYILATGSADKTV 174
S +DD + +WD + V K VDA HTA V +S++ E + + + D+ +
Sbjct: 195 SASDDHTICLWDISA--VPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKL 252
Query: 175 ALWDLR--NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
+WD R N HS ++H E+ + ++P++E ILA+ D+ + +WDL +
Sbjct: 253 MIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL 306
Score = 124 (48.7 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 33/140 (23%), Positives = 67/140 (47%)
Query: 116 ESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVA 175
E + + + D+ + +WD R N+ H+ ++H E+ + ++P++E ILA+ D+ +
Sbjct: 286 EFILATGSADKTVALWDLR--NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLN 343
Query: 176 LWDLRNLKLK-------------LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWD 222
+WDL + + L H +I W+P+ ++ S D + VW
Sbjct: 344 VWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQ 403
Query: 223 LSK-IGEEQSTEDAEDGPPE 241
+++ I ++ TE + D PE
Sbjct: 404 MAENIYNDEDTEGSVD--PE 421
Score = 111 (44.1 bits), Expect = 3.6e-15, Sum P(2) = 3.6e-15
Identities = 37/148 (25%), Positives = 65/148 (43%)
Query: 148 HTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHS---------FESHKDEIFQ 198
H EVN + P + I+AT + V ++D K H+ E +
Sbjct: 123 HEGEVNRARYMPQNPCIIATKTPSCDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYG 182
Query: 199 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 258
+ W+P+ L S+ D + +WD+S + +E DA+ I GHTA + D SW
Sbjct: 183 LSWNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKT-------IFTGHTAVVEDVSW 235
Query: 259 NPNEPWVICSVSEDNIMQEYCDSTDSDT 286
+ + SV++D + + D+ ++T
Sbjct: 236 HLLHESLFGSVADDQKLMIW-DTRSNNT 262
Score = 103 (41.3 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 33/138 (23%), Positives = 58/138 (42%)
Query: 141 PSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKL--KLHS----FESHKD 194
P + H E LS+NP L + S D T+ LWD+ + K+ F H
Sbjct: 169 PDLRLRGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTA 228
Query: 195 EIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKIS 254
+ V W +E++ S D++L +WD + + + HTA+++
Sbjct: 229 VVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVD-----------AHTAEVN 277
Query: 255 DFSWNPNEPWVICSVSED 272
S+NP +++ + S D
Sbjct: 278 CLSFNPYSEFILATGSAD 295
Score = 80 (33.2 bits), Expect = 5.9e-12, Sum P(2) = 5.9e-12
Identities = 19/82 (23%), Positives = 38/82 (46%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWD-TRSHNVSKPSHTVDA----------HTAEVNCLSF 157
V W +E++ S D++L +WD ++ P D HTA+++ S+
Sbjct: 323 VQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSW 382
Query: 158 NPYSEYILATGSADKTVALWDL 179
NP +++ + S D + +W +
Sbjct: 383 NPNEPWVICSVSEDNIMQVWQM 404
Score = 78 (32.5 bits), Expect = 9.6e-12, Sum P(2) = 9.6e-12
Identities = 22/91 (24%), Positives = 44/91 (48%)
Query: 183 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPEL 242
K+++ +H+ E+ + ++ P N I+A+ + V+D +K + + + P+L
Sbjct: 114 KIEIEIKINHEGEVNRARYMPQNPCIIATKTPSCDVLVFDYTK--HPSKPDPSGECNPDL 171
Query: 243 LFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
GH + SWNPN + S S+D+
Sbjct: 172 RL--RGHQKEGYGLSWNPNLSGNLLSASDDH 200
Score = 37 (18.1 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 8/37 (21%), Positives = 17/37 (45%)
Query: 108 DVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHT 144
D +W+ + SV++D + +W + N+ T
Sbjct: 379 DFSWNPNEPWVICSVSEDNIMQVWQM-AENIYNDEDT 414
>UNIPROTKB|O93377 [details] [associations]
symbol:rbbp4-a "Histone-binding protein RBBP4-A"
species:8355 "Xenopus laevis" [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0007049 GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 HOVERGEN:HBG053236 EMBL:AF073787
EMBL:BC077257 RefSeq:NP_001083811.1 UniGene:Xl.537
ProteinModelPortal:O93377 SMR:O93377 PRIDE:O93377 GeneID:399131
KEGG:xla:399131 CTD:399131 Xenbase:XB-GENE-482006 Uniprot:O93377
Length = 425
Score = 884 (316.2 bits), Expect = 1.2e-102, Sum P(2) = 1.2e-102
Identities = 162/170 (95%), Positives = 168/170 (98%)
Query: 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166
+DV+WHLLHESLFGSVADDQKLMIWDTRS+N SKPSH+VDAHTAEVNCLSFNPYSE+ILA
Sbjct: 231 EDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILA 290
Query: 167 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRL+VWDLSKI
Sbjct: 291 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKI 350
Query: 227 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276
GEEQS EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ
Sbjct: 351 GEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 400
Score = 153 (58.9 bits), Expect = 1.2e-102, Sum P(2) = 1.2e-102
Identities = 28/31 (90%), Positives = 30/31 (96%)
Query: 46 FDDAVEERVINEEYKIWKKNTPFLYDLVVNN 76
FDDAVEERVINEEYKIWKKNTPFLYDLV+ +
Sbjct: 8 FDDAVEERVINEEYKIWKKNTPFLYDLVMTH 38
Score = 142 (55.0 bits), Expect = 2.2e-18, Sum P(2) = 2.2e-18
Identities = 34/114 (29%), Positives = 60/114 (52%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDA------HTAEVNCLSFNPYSEYILATGSADKTV 174
S +DD + +WD + V K VDA HTA V +S++ E + + + D+ +
Sbjct: 195 SASDDHTICLWDISA--VPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKL 252
Query: 175 ALWDLR--NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
+WD R N HS ++H E+ + ++P++E ILA+ D+ + +WDL +
Sbjct: 253 MIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL 306
Score = 123 (48.4 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
Identities = 33/140 (23%), Positives = 66/140 (47%)
Query: 116 ESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVA 175
E + + + D+ + +WD R N+ H+ ++H E+ + ++P++E ILA+ D+ +
Sbjct: 286 EFILATGSADKTVALWDLR--NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLN 343
Query: 176 LWDLRNLKLK-------------LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWD 222
+WDL + + L H +I W+P+ ++ S D + VW
Sbjct: 344 VWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQ 403
Query: 223 LSK-IGEEQSTEDAEDGPPE 241
+++ I ++ TE D PE
Sbjct: 404 MAENIYNDEDTEGGVD--PE 421
Score = 113 (44.8 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
Identities = 37/148 (25%), Positives = 65/148 (43%)
Query: 148 HTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHS---------FESHKDEIFQ 198
H EVN + P + I+AT + V ++D K H+ E +
Sbjct: 123 HDGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECNPNLRLRGHQKEGYG 182
Query: 199 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 258
+ W+P+ L S+ D + +WD+S + +E DA+ I GHTA + D SW
Sbjct: 183 LSWNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKT-------IFTGHTAVVEDVSW 235
Query: 259 NPNEPWVICSVSEDNIMQEYCDSTDSDT 286
+ + SV++D + + D+ ++T
Sbjct: 236 HLLHESLFGSVADDQKLMIW-DTRSNNT 262
Score = 104 (41.7 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
Identities = 33/138 (23%), Positives = 59/138 (42%)
Query: 141 PSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKL--KLHS----FESHKD 194
P+ + H E LS+NP L + S D T+ LWD+ + K+ F H
Sbjct: 169 PNLRLRGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTA 228
Query: 195 EIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKIS 254
+ V W +E++ S D++L +WD + + + HTA+++
Sbjct: 229 VVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVD-----------AHTAEVN 277
Query: 255 DFSWNPNEPWVICSVSED 272
S+NP +++ + S D
Sbjct: 278 CLSFNPYSEFILATGSAD 295
Score = 80 (33.2 bits), Expect = 5.9e-12, Sum P(2) = 5.9e-12
Identities = 19/82 (23%), Positives = 38/82 (46%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWD-TRSHNVSKPSHTVDA----------HTAEVNCLSF 157
V W +E++ S D++L +WD ++ P D HTA+++ S+
Sbjct: 323 VQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSW 382
Query: 158 NPYSEYILATGSADKTVALWDL 179
NP +++ + S D + +W +
Sbjct: 383 NPNEPWVICSVSEDNIMQVWQM 404
Score = 75 (31.5 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 22/91 (24%), Positives = 42/91 (46%)
Query: 183 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPEL 242
K+++ +H E+ + ++ P N I+A+ + V+D +K + + + P L
Sbjct: 114 KIEIEIKITHDGEVNRARYMPQNPCIIATKTPTSDVLVFDYTK--HPSKPDPSGECNPNL 171
Query: 243 LFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
GH + SWNPN + S S+D+
Sbjct: 172 RL--RGHQKEGYGLSWNPNLSGNLLSASDDH 200
Score = 37 (18.1 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 8/37 (21%), Positives = 17/37 (45%)
Query: 108 DVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHT 144
D +W+ + SV++D + +W + N+ T
Sbjct: 379 DFSWNPNEPWVICSVSEDNIMQVWQM-AENIYNDEDT 414
>ZFIN|ZDB-GENE-030131-445 [details] [associations]
symbol:rbb4 "retinoblastoma binding protein 4"
species:7955 "Danio rerio" [GO:0033186 "CAF-1 complex"
evidence=ISS] [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0006338 "chromatin
remodeling" evidence=ISS] [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-445
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BX465206
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
IPI:IPI00995625 Ensembl:ENSDART00000130326 ArrayExpress:E7FEX2
Bgee:E7FEX2 Uniprot:E7FEX2
Length = 444
Score = 883 (315.9 bits), Expect = 1.5e-102, Sum P(2) = 1.5e-102
Identities = 162/170 (95%), Positives = 167/170 (98%)
Query: 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166
+DV+WHLLHESLFGSVADDQKLMIWDTRS+N SKPSH VDAHTAEVNCLSFNPYSE+ILA
Sbjct: 231 EDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFILA 290
Query: 167 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRL+VWDLSKI
Sbjct: 291 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKI 350
Query: 227 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276
GEEQS EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ
Sbjct: 351 GEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 400
Score = 153 (58.9 bits), Expect = 1.5e-102, Sum P(2) = 1.5e-102
Identities = 28/31 (90%), Positives = 30/31 (96%)
Query: 46 FDDAVEERVINEEYKIWKKNTPFLYDLVVNN 76
FDDAVEERVINEEYKIWKKNTPFLYDLV+ +
Sbjct: 8 FDDAVEERVINEEYKIWKKNTPFLYDLVMTH 38
Score = 138 (53.6 bits), Expect = 6.7e-18, Sum P(2) = 6.7e-18
Identities = 33/114 (28%), Positives = 60/114 (52%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDA------HTAEVNCLSFNPYSEYILATGSADKTV 174
S +DD + +WD + V K VDA HTA V +S++ E + + + D+ +
Sbjct: 195 SASDDHTICLWDIST--VPKEGKIVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKL 252
Query: 175 ALWDLR--NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
+WD R N H+ ++H E+ + ++P++E ILA+ D+ + +WDL +
Sbjct: 253 MIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL 306
Score = 121 (47.7 bits), Expect = 3.9e-16, Sum P(2) = 3.9e-16
Identities = 31/136 (22%), Positives = 64/136 (47%)
Query: 116 ESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVA 175
E + + + D+ + +WD R N+ H+ ++H E+ + ++P++E ILA+ D+ +
Sbjct: 286 EFILATGSADKTVALWDLR--NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLN 343
Query: 176 LWDLRNLKLK-------------LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWD 222
+WDL + + L H +I W+P+ ++ S D + VW
Sbjct: 344 VWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQ 403
Query: 223 LSK-IGEEQSTEDAED 237
+++ I ++ E A D
Sbjct: 404 MAENIYNDEDPEGAAD 419
Score = 114 (45.2 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
Identities = 37/148 (25%), Positives = 65/148 (43%)
Query: 148 HTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHS---------FESHKDEIFQ 198
H EVN + P + I+AT + V ++D K H+ E +
Sbjct: 123 HEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECTPDLRLRGHQKEGYG 182
Query: 199 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 258
+ W+P+ L S+ D + +WD+S + +E DA+ I GHTA + D SW
Sbjct: 183 LSWNPNLSGCLLSASDDHTICLWDISTVPKEGKIVDAKT-------IFTGHTAVVEDVSW 235
Query: 259 NPNEPWVICSVSEDNIMQEYCDSTDSDT 286
+ + SV++D + + D+ ++T
Sbjct: 236 HLLHESLFGSVADDQKLMIW-DTRSNNT 262
Score = 110 (43.8 bits), Expect = 5.4e-15, Sum P(2) = 5.4e-15
Identities = 35/138 (25%), Positives = 59/138 (42%)
Query: 141 PSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKL--KLHS----FESHKD 194
P + H E LS+NP L + S D T+ LWD+ + K+ F H
Sbjct: 169 PDLRLRGHQKEGYGLSWNPNLSGCLLSASDDHTICLWDISTVPKEGKIVDAKTIFTGHTA 228
Query: 195 EIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKIS 254
+ V W +E++ S D++L +WD ++ A D HTA+++
Sbjct: 229 VVEDVSWHLLHESLFGSVADDQKLMIWD-TRSNNTSKPSHAVDA----------HTAEVN 277
Query: 255 DFSWNPNEPWVICSVSED 272
S+NP +++ + S D
Sbjct: 278 CLSFNPYSEFILATGSAD 295
Score = 82 (33.9 bits), Expect = 4.3e-12, Sum P(2) = 4.3e-12
Identities = 22/91 (24%), Positives = 44/91 (48%)
Query: 183 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPEL 242
K+++ +H+ E+ + ++ P N I+A+ + V+D +K + + + P+L
Sbjct: 114 KIEIEIKINHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTK--HPSKPDPSGECTPDL 171
Query: 243 LFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
GH + SWNPN + S S+D+
Sbjct: 172 RL--RGHQKEGYGLSWNPNLSGCLLSASDDH 200
Score = 80 (33.2 bits), Expect = 7.0e-12, Sum P(2) = 7.0e-12
Identities = 19/82 (23%), Positives = 38/82 (46%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWD-TRSHNVSKPSHTVDA----------HTAEVNCLSF 157
V W +E++ S D++L +WD ++ P D HTA+++ S+
Sbjct: 323 VQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSW 382
Query: 158 NPYSEYILATGSADKTVALWDL 179
NP +++ + S D + +W +
Sbjct: 383 NPNEPWVICSVSEDNIMQVWQM 404
Score = 38 (18.4 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 9/41 (21%), Positives = 17/41 (41%)
Query: 108 DVAWHLLHESLFGSVADDQKLMIWDTRS--HNVSKPSHTVD 146
D +W+ + SV++D + +W +N P D
Sbjct: 379 DFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGAAD 419
>UNIPROTKB|Q5RF92 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9601
"Pongo abelii" [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0007049
GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 CTD:5928 HOVERGEN:HBG053236
EMBL:CR857269 RefSeq:NP_001124686.1 UniGene:Pab.10290
UniGene:Pab.17706 ProteinModelPortal:Q5RF92 SMR:Q5RF92
GeneID:100461561 KEGG:pon:100461561 InParanoid:Q5RF92
Uniprot:Q5RF92
Length = 425
Score = 884 (316.2 bits), Expect = 4.1e-102, Sum P(2) = 4.1e-102
Identities = 162/170 (95%), Positives = 168/170 (98%)
Query: 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166
+DV+WHLLHESLFGSVADDQKLMIWDTRS+N SKPSH+VDAHTAEVNCLSFNPYSE+ILA
Sbjct: 231 EDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILA 290
Query: 167 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRL+VWDLSKI
Sbjct: 291 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKI 350
Query: 227 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276
GEEQS EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ
Sbjct: 351 GEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 400
Score = 148 (57.2 bits), Expect = 4.1e-102, Sum P(2) = 4.1e-102
Identities = 27/31 (87%), Positives = 30/31 (96%)
Query: 46 FDDAVEERVINEEYKIWKKNTPFLYDLVVNN 76
FDDAVEERVINEE+KIWKKNTPFLYDLV+ +
Sbjct: 8 FDDAVEERVINEEHKIWKKNTPFLYDLVMTH 38
Score = 142 (55.0 bits), Expect = 8.1e-18, Sum P(2) = 8.1e-18
Identities = 34/114 (29%), Positives = 60/114 (52%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDA------HTAEVNCLSFNPYSEYILATGSADKTV 174
S +DD + +WD + V K VDA HTA V +S++ E + + + D+ +
Sbjct: 195 SASDDHTICLWDISA--VPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKL 252
Query: 175 ALWDLR--NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
+WD R N HS ++H E+ + ++P++E ILA+ D+ + +WDL +
Sbjct: 253 MIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL 306
Score = 118 (46.6 bits), Expect = 2.6e-15, Sum P(2) = 2.6e-15
Identities = 32/140 (22%), Positives = 66/140 (47%)
Query: 116 ESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVA 175
E + + + D+ + +WD R N+ H+ ++H E+ + ++P++E ILA+ D+ +
Sbjct: 286 EFILATGSADKTVALWDLR--NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLN 343
Query: 176 LWDLRNLKLK-------------LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWD 222
+WDL + + L H +I W+P+ ++ S D + VW
Sbjct: 344 VWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQ 403
Query: 223 LSK-IGEEQSTEDAEDGPPE 241
+++ I ++ E + D PE
Sbjct: 404 MAENIYNDEDPEGSVD--PE 421
Score = 114 (45.2 bits), Expect = 6.6e-15, Sum P(2) = 6.6e-15
Identities = 37/148 (25%), Positives = 65/148 (43%)
Query: 148 HTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHS---------FESHKDEIFQ 198
H EVN + P + I+AT + V ++D K H+ E +
Sbjct: 123 HEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYG 182
Query: 199 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 258
+ W+P+ L S+ D + +WD+S + +E DA+ I GHTA + D SW
Sbjct: 183 LSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKT-------IFTGHTAVVEDVSW 235
Query: 259 NPNEPWVICSVSEDNIMQEYCDSTDSDT 286
+ + SV++D + + D+ ++T
Sbjct: 236 HLLHESLFGSVADDQKLMIW-DTRSNNT 262
Score = 103 (41.3 bits), Expect = 9.2e-14, Sum P(2) = 9.2e-14
Identities = 33/138 (23%), Positives = 58/138 (42%)
Query: 141 PSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKL--KLHS----FESHKD 194
P + H E LS+NP L + S D T+ LWD+ + K+ F H
Sbjct: 169 PDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTA 228
Query: 195 EIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKIS 254
+ V W +E++ S D++L +WD + + + HTA+++
Sbjct: 229 VVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVD-----------AHTAEVN 277
Query: 255 DFSWNPNEPWVICSVSED 272
S+NP +++ + S D
Sbjct: 278 CLSFNPYSEFILATGSAD 295
Score = 80 (33.2 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 19/82 (23%), Positives = 38/82 (46%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWD-TRSHNVSKPSHTVDA----------HTAEVNCLSF 157
V W +E++ S D++L +WD ++ P D HTA+++ S+
Sbjct: 323 VQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSW 382
Query: 158 NPYSEYILATGSADKTVALWDL 179
NP +++ + S D + +W +
Sbjct: 383 NPNEPWVICSVSEDNIMQVWQM 404
Score = 80 (33.2 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 22/91 (24%), Positives = 44/91 (48%)
Query: 183 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPEL 242
K+++ +H+ E+ + ++ P N I+A+ + V+D +K + + + P+L
Sbjct: 114 KIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTK--HPSKPDPSGECNPDL 171
Query: 243 LFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
GH + SWNPN + S S+D+
Sbjct: 172 RL--RGHQKEGYGLSWNPNLSGHLLSASDDH 200
Score = 43 (20.2 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 10/41 (24%), Positives = 19/41 (46%)
Query: 108 DVAWHLLHESLFGSVADDQKLMIWDTRS--HNVSKPSHTVD 146
D +W+ + SV++D + +W +N P +VD
Sbjct: 379 DFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSVD 419
>UNIPROTKB|Q6P315 [details] [associations]
symbol:rbbp7 "Histone-binding protein RBBP7" species:8364
"Xenopus (Silurana) tropicalis" [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
OMA:DGFLLHV HOVERGEN:HBG053236 CTD:5931 KO:K11659 EMBL:BC064219
RefSeq:NP_989285.1 UniGene:Str.17153 ProteinModelPortal:Q6P315
SMR:Q6P315 STRING:Q6P315 Ensembl:ENSXETT00000002157 GeneID:394900
KEGG:xtr:394900 Xenbase:XB-GENE-487909 InParanoid:Q6P315
Uniprot:Q6P315
Length = 425
Score = 877 (313.8 bits), Expect = 2.2e-101, Sum P(2) = 2.2e-101
Identities = 161/170 (94%), Positives = 166/170 (97%)
Query: 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166
+DVAWHLLHESLFGSVADDQKLMIWDTRS+ SKPSH+VDAHTAEVNCLSFNPYSE+ILA
Sbjct: 230 EDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILA 289
Query: 167 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
TGSADKTVALWDLRNLKLKLHSFESHKDEIFQV WSPHNETILASSGTDRRL+VWDLSKI
Sbjct: 290 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKI 349
Query: 227 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276
GEEQS EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ
Sbjct: 350 GEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 399
Score = 148 (57.2 bits), Expect = 2.2e-101, Sum P(2) = 2.2e-101
Identities = 27/33 (81%), Positives = 30/33 (90%)
Query: 44 EPFDDAVEERVINEEYKIWKKNTPFLYDLVVNN 76
E F+D VEERVINEEYKIWKKNTPFLYDLV+ +
Sbjct: 5 EMFEDTVEERVINEEYKIWKKNTPFLYDLVMTH 37
Score = 128 (50.1 bits), Expect = 2.3e-16, Sum P(2) = 2.3e-16
Identities = 42/169 (24%), Positives = 79/169 (46%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDA------HTAEVNCLSFNPYSEYILATGSADKTV 174
S +DD + +WD + K VDA H+A V ++++ E + + + D+ +
Sbjct: 194 SASDDHTVCLWDISAG--PKEGKVVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKL 251
Query: 175 ALWDLR-NLKLK-LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEE-QS 231
+WD R N K HS ++H E+ + ++P++E ILA+ D+ + +WDL + + S
Sbjct: 252 MIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHS 311
Query: 232 TEDAEDGPPELLFIHGG-HTAKISDFSWNPNE--PWVICSVSEDNIMQE 277
E +D E+ +H H I S W + + E+ ++
Sbjct: 312 FESHKD---EIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAED 357
Score = 111 (44.1 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 25/123 (20%), Positives = 60/123 (48%)
Query: 116 ESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVA 175
E + + + D+ + +WD R N+ H+ ++H E+ + ++P++E ILA+ D+ +
Sbjct: 285 EFILATGSADKTVALWDLR--NLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLN 342
Query: 176 LWDLRNLKLKLHSFES-------------HKDEIFQVQWSPHNETILASSGTDRRLHVWD 222
+WDL + + + ++ H +I W+P+ ++ S D + +W
Sbjct: 343 VWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQ 402
Query: 223 LSK 225
+++
Sbjct: 403 MAE 405
Score = 93 (37.8 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 33/138 (23%), Positives = 57/138 (41%)
Query: 141 PSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDL----RNLKL--KLHSFESHKD 194
P + H E LS+N L + S D TV LWD+ + K+ F H
Sbjct: 168 PDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDISAGPKEGKVVDAKAIFTGHSA 227
Query: 195 EIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKIS 254
+ V W +E++ S D++L +WD + + + HTA+++
Sbjct: 228 VVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVD-----------AHTAEVN 276
Query: 255 DFSWNPNEPWVICSVSED 272
S+NP +++ + S D
Sbjct: 277 CLSFNPYSEFILATGSAD 294
Score = 88 (36.0 bits), Expect = 3.3e-12, Sum P(2) = 3.3e-12
Identities = 33/149 (22%), Positives = 63/149 (42%)
Query: 148 HTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHS---------FESHKDEIFQ 198
H EVN + P + I+AT + V ++D K H+ E +
Sbjct: 122 HEGEVNRARYMPQNPCIIATKTPSADVLVFDYTKHPSKPDPSGDCSPDLRLRGHQKEGYG 181
Query: 199 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 258
+ W+ + L S+ D + +WD+S +E DA+ I GH+A + D +W
Sbjct: 182 LSWNSNLSGHLLSASDDHTVCLWDISAGPKEGKVVDAKA-------IFTGHSAVVEDVAW 234
Query: 259 NPNEPWVICSVSEDNIMQEYCDSTDSDTK 287
+ + SV++D + + +++ +K
Sbjct: 235 HLLHESLFGSVADDQKLMIWDTRSNTTSK 263
Score = 75 (31.5 bits), Expect = 7.3e-11, Sum P(2) = 7.3e-11
Identities = 17/82 (20%), Positives = 37/82 (45%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVD-----------AHTAEVNCLSF 157
V W +E++ S D++L +WD + + + HTA+++ S+
Sbjct: 322 VHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSW 381
Query: 158 NPYSEYILATGSADKTVALWDL 179
NP +++ + S D + +W +
Sbjct: 382 NPNEPWVICSVSEDNIMQIWQM 403
Score = 75 (31.5 bits), Expect = 7.3e-11, Sum P(2) = 7.3e-11
Identities = 21/83 (25%), Positives = 39/83 (46%)
Query: 191 SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHT 250
+H+ E+ + ++ P N I+A+ + V+D +K + + D P+L GH
Sbjct: 121 NHEGEVNRARYMPQNPCIIATKTPSADVLVFDYTK--HPSKPDPSGDCSPDLRL--RGHQ 176
Query: 251 AKISDFSWNPNEPWVICSVSEDN 273
+ SWN N + S S+D+
Sbjct: 177 KEGYGLSWNSNLSGHLLSASDDH 199
Score = 37 (18.1 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 7/24 (29%), Positives = 13/24 (54%)
Query: 108 DVAWHLLHESLFGSVADDQKLMIW 131
D +W+ + SV++D + IW
Sbjct: 378 DFSWNPNEPWVICSVSEDNIMQIW 401
>UNIPROTKB|Q8AVH1 [details] [associations]
symbol:rbbp7 "Histone-binding protein RBBP7" species:8355
"Xenopus laevis" [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0035098 InterPro:IPR022052
Pfam:PF12265 HOVERGEN:HBG053236 CTD:5931 KO:K11659 EMBL:BC042283
RefSeq:NP_001080364.1 UniGene:Xl.55215 ProteinModelPortal:Q8AVH1
SMR:Q8AVH1 PRIDE:Q8AVH1 GeneID:380056 KEGG:xla:380056
Xenbase:XB-GENE-487913 Uniprot:Q8AVH1
Length = 425
Score = 877 (313.8 bits), Expect = 2.2e-101, Sum P(2) = 2.2e-101
Identities = 161/170 (94%), Positives = 166/170 (97%)
Query: 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166
+DVAWHLLHESLFGSVADDQKLMIWDTRS+ SKPSH+VDAHTAEVNCLSFNPYSE+ILA
Sbjct: 230 EDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILA 289
Query: 167 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
TGSADKTVALWDLRNLKLKLHSFESHKDEIFQV WSPHNETILASSGTDRRL+VWDLSKI
Sbjct: 290 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKI 349
Query: 227 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276
GEEQS EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ
Sbjct: 350 GEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 399
Score = 148 (57.2 bits), Expect = 2.2e-101, Sum P(2) = 2.2e-101
Identities = 27/33 (81%), Positives = 30/33 (90%)
Query: 44 EPFDDAVEERVINEEYKIWKKNTPFLYDLVVNN 76
E F+D VEERVINEEYKIWKKNTPFLYDLV+ +
Sbjct: 5 EMFEDTVEERVINEEYKIWKKNTPFLYDLVMTH 37
Score = 128 (50.1 bits), Expect = 2.3e-16, Sum P(2) = 2.3e-16
Identities = 42/169 (24%), Positives = 79/169 (46%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDA------HTAEVNCLSFNPYSEYILATGSADKTV 174
S +DD + +WD + K VDA H+A V ++++ E + + + D+ +
Sbjct: 194 SASDDHTVCLWDISAG--PKEGKVVDAKAVFTGHSAVVEDVAWHLLHESLFGSVADDQKL 251
Query: 175 ALWDLR-NLKLK-LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEE-QS 231
+WD R N K HS ++H E+ + ++P++E ILA+ D+ + +WDL + + S
Sbjct: 252 MIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHS 311
Query: 232 TEDAEDGPPELLFIHGG-HTAKISDFSWNPNE--PWVICSVSEDNIMQE 277
E +D E+ +H H I S W + + E+ ++
Sbjct: 312 FESHKD---EIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAED 357
Score = 111 (44.1 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 25/123 (20%), Positives = 60/123 (48%)
Query: 116 ESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVA 175
E + + + D+ + +WD R N+ H+ ++H E+ + ++P++E ILA+ D+ +
Sbjct: 285 EFILATGSADKTVALWDLR--NLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLN 342
Query: 176 LWDLRNLKLKLHSFES-------------HKDEIFQVQWSPHNETILASSGTDRRLHVWD 222
+WDL + + + ++ H +I W+P+ ++ S D + +W
Sbjct: 343 VWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQ 402
Query: 223 LSK 225
+++
Sbjct: 403 MAE 405
Score = 93 (37.8 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 33/138 (23%), Positives = 57/138 (41%)
Query: 141 PSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDL----RNLKL--KLHSFESHKD 194
P + H E LS+N L + S D TV LWD+ + K+ F H
Sbjct: 168 PDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDISAGPKEGKVVDAKAVFTGHSA 227
Query: 195 EIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKIS 254
+ V W +E++ S D++L +WD + + + HTA+++
Sbjct: 228 VVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVD-----------AHTAEVN 276
Query: 255 DFSWNPNEPWVICSVSED 272
S+NP +++ + S D
Sbjct: 277 CLSFNPYSEFILATGSAD 294
Score = 87 (35.7 bits), Expect = 4.2e-12, Sum P(2) = 4.2e-12
Identities = 32/149 (21%), Positives = 63/149 (42%)
Query: 148 HTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHS---------FESHKDEIFQ 198
H EVN + P + I+AT + V ++D K H+ E +
Sbjct: 122 HEGEVNRARYMPQNPCIIATKTPSADVLVFDYTKHPSKPDPSGECSPDLRLRGHQKEGYG 181
Query: 199 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 258
+ W+ + L S+ D + +WD+S +E DA+ + GH+A + D +W
Sbjct: 182 LSWNSNLSGHLLSASDDHTVCLWDISAGPKEGKVVDAKA-------VFTGHSAVVEDVAW 234
Query: 259 NPNEPWVICSVSEDNIMQEYCDSTDSDTK 287
+ + SV++D + + +++ +K
Sbjct: 235 HLLHESLFGSVADDQKLMIWDTRSNTTSK 263
Score = 75 (31.5 bits), Expect = 7.3e-11, Sum P(2) = 7.3e-11
Identities = 17/82 (20%), Positives = 37/82 (45%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVD-----------AHTAEVNCLSF 157
V W +E++ S D++L +WD + + + HTA+++ S+
Sbjct: 322 VHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSW 381
Query: 158 NPYSEYILATGSADKTVALWDL 179
NP +++ + S D + +W +
Sbjct: 382 NPNEPWVICSVSEDNIMQIWQM 403
Score = 71 (30.1 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 20/83 (24%), Positives = 39/83 (46%)
Query: 191 SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHT 250
+H+ E+ + ++ P N I+A+ + V+D +K + + + P+L GH
Sbjct: 121 NHEGEVNRARYMPQNPCIIATKTPSADVLVFDYTK--HPSKPDPSGECSPDLRL--RGHQ 176
Query: 251 AKISDFSWNPNEPWVICSVSEDN 273
+ SWN N + S S+D+
Sbjct: 177 KEGYGLSWNSNLSGHLLSASDDH 199
Score = 37 (18.1 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 7/24 (29%), Positives = 13/24 (54%)
Query: 108 DVAWHLLHESLFGSVADDQKLMIW 131
D +W+ + SV++D + IW
Sbjct: 378 DFSWNPNEPWVICSVSEDNIMQIW 401
>UNIPROTKB|Q3SWX8 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9913
"Bos taurus" [GO:0016581 "NuRD complex" evidence=ISS] [GO:0030308
"negative regulation of cell growth" evidence=ISS] [GO:0070370
"cellular heat acclimation" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 OMA:DGFLLHV HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC104613 IPI:IPI00709403
RefSeq:NP_001029810.1 UniGene:Bt.4908 ProteinModelPortal:Q3SWX8
SMR:Q3SWX8 STRING:Q3SWX8 PRIDE:Q3SWX8 Ensembl:ENSBTAT00000029923
GeneID:537402 KEGG:bta:537402 CTD:5931 InParanoid:Q3SWX8 KO:K11659
NextBio:20877129 Uniprot:Q3SWX8
Length = 425
Score = 872 (312.0 bits), Expect = 7.5e-101, Sum P(2) = 7.5e-101
Identities = 160/170 (94%), Positives = 165/170 (97%)
Query: 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166
+DVAWHLLHESLFGSVADDQKLMIWDTRS+ SKPSH VDAHTAEVNCLSFNPYSE+ILA
Sbjct: 230 EDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILA 289
Query: 167 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
TGSADKTVALWDLRNLKLKLH+FESHKDEIFQV WSPHNETILASSGTDRRL+VWDLSKI
Sbjct: 290 TGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKI 349
Query: 227 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276
GEEQS EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ
Sbjct: 350 GEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 399
Score = 148 (57.2 bits), Expect = 7.5e-101, Sum P(2) = 7.5e-101
Identities = 27/33 (81%), Positives = 30/33 (90%)
Query: 44 EPFDDAVEERVINEEYKIWKKNTPFLYDLVVNN 76
E F+D VEERVINEEYKIWKKNTPFLYDLV+ +
Sbjct: 5 EMFEDTVEERVINEEYKIWKKNTPFLYDLVMTH 37
Score = 122 (48.0 bits), Expect = 9.8e-16, Sum P(2) = 9.8e-16
Identities = 40/168 (23%), Positives = 76/168 (45%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDA------HTAEVNCLSFNPYSEYILATGSADKTV 174
S +DD + +WD + K VDA H+A V ++++ E + + + D+ +
Sbjct: 194 SASDDHTVCLWDINAG--PKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKL 251
Query: 175 ALWDLR-NLKLK-LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQST 232
+WD R N K H ++H E+ + ++P++E ILA+ D+ + +WDL + + T
Sbjct: 252 MIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHT 311
Query: 233 EDAEDGPPELLFIHGG-HTAKISDFSWNPNE--PWVICSVSEDNIMQE 277
E E+ +H H I S W + + E+ ++
Sbjct: 312 --FESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAED 357
Score = 120 (47.3 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 30/140 (21%), Positives = 68/140 (48%)
Query: 116 ESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVA 175
E + + + D+ + +WD R N+ HT ++H E+ + ++P++E ILA+ D+ +
Sbjct: 285 EFILATGSADKTVALWDLR--NLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLN 342
Query: 176 LWDLRNLKLKLHSFES-------------HKDEIFQVQWSPHNETILASSGTDRRLHVWD 222
+WDL + + + ++ H +I W+P+ ++ S D + +W
Sbjct: 343 VWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQ 402
Query: 223 LSKIGEEQSTEDAEDGPPEL 242
+++ + E+++ PEL
Sbjct: 403 MAE--NIYNDEESDVTTPEL 420
Score = 100 (40.3 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 35/138 (25%), Positives = 59/138 (42%)
Query: 141 PSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDL----RNLKL--KLHSFESHKD 194
P + H E LS+N L + S D TV LWD+ + K+ F H
Sbjct: 168 PDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSA 227
Query: 195 EIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKIS 254
+ V W +E++ S D++L +WD + + P L+ HTA+++
Sbjct: 228 VVEDVAWHLLHESLFGSVADDQKLMIWD--------TRSNTTSKPSHLV---DAHTAEVN 276
Query: 255 DFSWNPNEPWVICSVSED 272
S+NP +++ + S D
Sbjct: 277 CLSFNPYSEFILATGSAD 294
Score = 92 (37.4 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 33/153 (21%), Positives = 65/153 (42%)
Query: 148 HTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHS---------FESHKDEIFQ 198
H EVN + P + +I+AT + V ++D K H+ E +
Sbjct: 122 HEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYG 181
Query: 199 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 258
+ W+ + L S+ D + +WD++ +E DA+ I GH+A + D +W
Sbjct: 182 LSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKA-------IFTGHSAVVEDVAW 234
Query: 259 NPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRL 291
+ + SV++D + + +++ +K L
Sbjct: 235 HLLHESLFGSVADDQKLMIWDTRSNTTSKPSHL 267
Score = 75 (31.5 bits), Expect = 7.3e-11, Sum P(2) = 7.3e-11
Identities = 17/82 (20%), Positives = 37/82 (45%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVD-----------AHTAEVNCLSF 157
V W +E++ S D++L +WD + + + HTA+++ S+
Sbjct: 322 VHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSW 381
Query: 158 NPYSEYILATGSADKTVALWDL 179
NP +++ + S D + +W +
Sbjct: 382 NPNEPWVICSVSEDNIMQIWQM 403
Score = 68 (29.0 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 20/83 (24%), Positives = 39/83 (46%)
Query: 191 SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHT 250
+H+ E+ + ++ P N I+A+ + V+D +K + + + P+L GH
Sbjct: 121 NHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTK--HPAKPDPSGECNPDLRL--RGHQ 176
Query: 251 AKISDFSWNPNEPWVICSVSEDN 273
+ SWN N + S S+D+
Sbjct: 177 KEGYGLSWNSNLSGHLLSASDDH 199
Score = 40 (19.1 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 11/45 (24%), Positives = 21/45 (46%)
Query: 108 DVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEV 152
D +W+ + SV++D + IW + N+ + D T E+
Sbjct: 378 DFSWNPNEPWVICSVSEDNIMQIWQM-AENIYNDEES-DVTTPEL 420
>UNIPROTKB|E2RM49 [details] [associations]
symbol:RBBP7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
CTD:5931 KO:K11659 EMBL:AAEX03026166 RefSeq:XP_857851.1
ProteinModelPortal:E2RM49 Ensembl:ENSCAFT00000020249 GeneID:480854
KEGG:cfa:480854 NextBio:20855780 Uniprot:E2RM49
Length = 425
Score = 872 (312.0 bits), Expect = 7.5e-101, Sum P(2) = 7.5e-101
Identities = 160/170 (94%), Positives = 165/170 (97%)
Query: 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166
+DVAWHLLHESLFGSVADDQKLMIWDTRS+ SKPSH VDAHTAEVNCLSFNPYSE+ILA
Sbjct: 230 EDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILA 289
Query: 167 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
TGSADKTVALWDLRNLKLKLH+FESHKDEIFQV WSPHNETILASSGTDRRL+VWDLSKI
Sbjct: 290 TGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKI 349
Query: 227 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276
GEEQS EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ
Sbjct: 350 GEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 399
Score = 148 (57.2 bits), Expect = 7.5e-101, Sum P(2) = 7.5e-101
Identities = 27/33 (81%), Positives = 30/33 (90%)
Query: 44 EPFDDAVEERVINEEYKIWKKNTPFLYDLVVNN 76
E F+D VEERVINEEYKIWKKNTPFLYDLV+ +
Sbjct: 5 EMFEDTVEERVINEEYKIWKKNTPFLYDLVMTH 37
Score = 122 (48.0 bits), Expect = 9.8e-16, Sum P(2) = 9.8e-16
Identities = 40/168 (23%), Positives = 76/168 (45%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDA------HTAEVNCLSFNPYSEYILATGSADKTV 174
S +DD + +WD + K VDA H+A V ++++ E + + + D+ +
Sbjct: 194 SASDDHTVCLWDINAG--PKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKL 251
Query: 175 ALWDLR-NLKLK-LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQST 232
+WD R N K H ++H E+ + ++P++E ILA+ D+ + +WDL + + T
Sbjct: 252 MIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHT 311
Query: 233 EDAEDGPPELLFIHGG-HTAKISDFSWNPNE--PWVICSVSEDNIMQE 277
E E+ +H H I S W + + E+ ++
Sbjct: 312 --FESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAED 357
Score = 116 (45.9 bits), Expect = 4.1e-15, Sum P(2) = 4.1e-15
Identities = 28/131 (21%), Positives = 64/131 (48%)
Query: 116 ESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVA 175
E + + + D+ + +WD R N+ HT ++H E+ + ++P++E ILA+ D+ +
Sbjct: 285 EFILATGSADKTVALWDLR--NLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLN 342
Query: 176 LWDLRNLKLKLHSFES-------------HKDEIFQVQWSPHNETILASSGTDRRLHVWD 222
+WDL + + + ++ H +I W+P+ ++ S D + +W
Sbjct: 343 VWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQ 402
Query: 223 LSK--IGEEQS 231
+++ +E+S
Sbjct: 403 MAENIYNDEES 413
Score = 100 (40.3 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 35/138 (25%), Positives = 59/138 (42%)
Query: 141 PSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDL----RNLKL--KLHSFESHKD 194
P + H E LS+N L + S D TV LWD+ + K+ F H
Sbjct: 168 PDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSA 227
Query: 195 EIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKIS 254
+ V W +E++ S D++L +WD + + P L+ HTA+++
Sbjct: 228 VVEDVAWHLLHESLFGSVADDQKLMIWD--------TRSNTTSKPSHLV---DAHTAEVN 276
Query: 255 DFSWNPNEPWVICSVSED 272
S+NP +++ + S D
Sbjct: 277 CLSFNPYSEFILATGSAD 294
Score = 92 (37.4 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 33/153 (21%), Positives = 65/153 (42%)
Query: 148 HTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHS---------FESHKDEIFQ 198
H EVN + P + +I+AT + V ++D K H+ E +
Sbjct: 122 HEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYG 181
Query: 199 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 258
+ W+ + L S+ D + +WD++ +E DA+ I GH+A + D +W
Sbjct: 182 LSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKA-------IFTGHSAVVEDVAW 234
Query: 259 NPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRL 291
+ + SV++D + + +++ +K L
Sbjct: 235 HLLHESLFGSVADDQKLMIWDTRSNTTSKPSHL 267
Score = 75 (31.5 bits), Expect = 7.3e-11, Sum P(2) = 7.3e-11
Identities = 17/82 (20%), Positives = 37/82 (45%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVD-----------AHTAEVNCLSF 157
V W +E++ S D++L +WD + + + HTA+++ S+
Sbjct: 322 VHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSW 381
Query: 158 NPYSEYILATGSADKTVALWDL 179
NP +++ + S D + +W +
Sbjct: 382 NPNEPWVICSVSEDNIMQIWQM 403
Score = 68 (29.0 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 20/83 (24%), Positives = 39/83 (46%)
Query: 191 SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHT 250
+H+ E+ + ++ P N I+A+ + V+D +K + + + P+L GH
Sbjct: 121 NHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTK--HPAKPDPSGECNPDLRL--RGHQ 176
Query: 251 AKISDFSWNPNEPWVICSVSEDN 273
+ SWN N + S S+D+
Sbjct: 177 KEGYGLSWNSNLSGHLLSASDDH 199
Score = 42 (19.8 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 11/45 (24%), Positives = 22/45 (48%)
Query: 108 DVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEV 152
D +W+ + SV++D + IW + N+ + D T+E+
Sbjct: 378 DFSWNPNEPWVICSVSEDNIMQIWQM-AENIYNDEES-DVTTSEL 420
>UNIPROTKB|Q16576 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9606
"Homo sapiens" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=IDA] [GO:0030308 "negative regulation of cell growth"
evidence=IDA] [GO:0035098 "ESC/E(Z) complex" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070370 "cellular
heat acclimation" evidence=IDA] [GO:0007275 "multicellular
organismal development" evidence=TAS] [GO:0008283 "cell
proliferation" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006334 "nucleosome assembly" evidence=TAS]
[GO:0034080 "CENP-A containing nucleosome assembly at centromere"
evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0007275
Pathway_Interaction_DB:telomerasepathway Reactome:REACT_115566
GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122
GO:GO:0035098 Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0034080
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 PDB:3CFS PDB:3CFV
PDBsum:3CFS PDBsum:3CFV HOGENOM:HOG000160330 OMA:DGFLLHV
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:U35143
EMBL:X72841 EMBL:AK091911 EMBL:AL929302 IPI:IPI00395865
IPI:IPI00646512 PIR:I39181 RefSeq:NP_001185648.1 RefSeq:NP_002884.1
UniGene:Hs.495755 ProteinModelPortal:Q16576 SMR:Q16576 DIP:DIP-436N
IntAct:Q16576 MINT:MINT-90512 STRING:Q16576 PhosphoSite:Q16576
DMDM:2494891 PaxDb:Q16576 PeptideAtlas:Q16576 PRIDE:Q16576
Ensembl:ENST00000380084 Ensembl:ENST00000380087 GeneID:5931
KEGG:hsa:5931 UCSC:uc004cxt.3 GeneCards:GC0XM016772 HGNC:HGNC:9890
HPA:CAB037084 MIM:300825 neXtProt:NX_Q16576 PharmGKB:PA34254
PhylomeDB:Q16576 ChiTaRS:RBBP7 EvolutionaryTrace:Q16576
GenomeRNAi:5931 NextBio:23110 PMAP-CutDB:Q16576 ArrayExpress:Q16576
Bgee:Q16576 CleanEx:HS_RBBP7 Genevestigator:Q16576
GermOnline:ENSG00000102054 Uniprot:Q16576
Length = 425
Score = 872 (312.0 bits), Expect = 7.5e-101, Sum P(2) = 7.5e-101
Identities = 160/170 (94%), Positives = 165/170 (97%)
Query: 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166
+DVAWHLLHESLFGSVADDQKLMIWDTRS+ SKPSH VDAHTAEVNCLSFNPYSE+ILA
Sbjct: 230 EDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILA 289
Query: 167 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
TGSADKTVALWDLRNLKLKLH+FESHKDEIFQV WSPHNETILASSGTDRRL+VWDLSKI
Sbjct: 290 TGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKI 349
Query: 227 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276
GEEQS EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ
Sbjct: 350 GEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 399
Score = 148 (57.2 bits), Expect = 7.5e-101, Sum P(2) = 7.5e-101
Identities = 27/33 (81%), Positives = 30/33 (90%)
Query: 44 EPFDDAVEERVINEEYKIWKKNTPFLYDLVVNN 76
E F+D VEERVINEEYKIWKKNTPFLYDLV+ +
Sbjct: 5 EMFEDTVEERVINEEYKIWKKNTPFLYDLVMTH 37
Score = 122 (48.0 bits), Expect = 9.8e-16, Sum P(2) = 9.8e-16
Identities = 40/168 (23%), Positives = 76/168 (45%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDA------HTAEVNCLSFNPYSEYILATGSADKTV 174
S +DD + +WD + K VDA H+A V ++++ E + + + D+ +
Sbjct: 194 SASDDHTVCLWDINAG--PKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKL 251
Query: 175 ALWDLR-NLKLK-LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQST 232
+WD R N K H ++H E+ + ++P++E ILA+ D+ + +WDL + + T
Sbjct: 252 MIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHT 311
Query: 233 EDAEDGPPELLFIHGG-HTAKISDFSWNPNE--PWVICSVSEDNIMQE 277
E E+ +H H I S W + + E+ ++
Sbjct: 312 --FESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAED 357
Score = 116 (45.9 bits), Expect = 4.1e-15, Sum P(2) = 4.1e-15
Identities = 28/131 (21%), Positives = 64/131 (48%)
Query: 116 ESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVA 175
E + + + D+ + +WD R N+ HT ++H E+ + ++P++E ILA+ D+ +
Sbjct: 285 EFILATGSADKTVALWDLR--NLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLN 342
Query: 176 LWDLRNLKLKLHSFES-------------HKDEIFQVQWSPHNETILASSGTDRRLHVWD 222
+WDL + + + ++ H +I W+P+ ++ S D + +W
Sbjct: 343 VWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQ 402
Query: 223 LSK--IGEEQS 231
+++ +E+S
Sbjct: 403 MAENIYNDEES 413
Score = 100 (40.3 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 35/138 (25%), Positives = 59/138 (42%)
Query: 141 PSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDL----RNLKL--KLHSFESHKD 194
P + H E LS+N L + S D TV LWD+ + K+ F H
Sbjct: 168 PDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSA 227
Query: 195 EIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKIS 254
+ V W +E++ S D++L +WD + + P L+ HTA+++
Sbjct: 228 VVEDVAWHLLHESLFGSVADDQKLMIWD--------TRSNTTSKPSHLV---DAHTAEVN 276
Query: 255 DFSWNPNEPWVICSVSED 272
S+NP +++ + S D
Sbjct: 277 CLSFNPYSEFILATGSAD 294
Score = 92 (37.4 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 33/153 (21%), Positives = 65/153 (42%)
Query: 148 HTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHS---------FESHKDEIFQ 198
H EVN + P + +I+AT + V ++D K H+ E +
Sbjct: 122 HEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYG 181
Query: 199 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 258
+ W+ + L S+ D + +WD++ +E DA+ I GH+A + D +W
Sbjct: 182 LSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKA-------IFTGHSAVVEDVAW 234
Query: 259 NPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRL 291
+ + SV++D + + +++ +K L
Sbjct: 235 HLLHESLFGSVADDQKLMIWDTRSNTTSKPSHL 267
Score = 75 (31.5 bits), Expect = 7.3e-11, Sum P(2) = 7.3e-11
Identities = 17/82 (20%), Positives = 37/82 (45%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVD-----------AHTAEVNCLSF 157
V W +E++ S D++L +WD + + + HTA+++ S+
Sbjct: 322 VHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSW 381
Query: 158 NPYSEYILATGSADKTVALWDL 179
NP +++ + S D + +W +
Sbjct: 382 NPNEPWVICSVSEDNIMQIWQM 403
Score = 68 (29.0 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 20/83 (24%), Positives = 39/83 (46%)
Query: 191 SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHT 250
+H+ E+ + ++ P N I+A+ + V+D +K + + + P+L GH
Sbjct: 121 NHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTK--HPAKPDPSGECNPDLRL--RGHQ 176
Query: 251 AKISDFSWNPNEPWVICSVSEDN 273
+ SWN N + S S+D+
Sbjct: 177 KEGYGLSWNSNLSGHLLSASDDH 199
Score = 42 (19.8 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 11/45 (24%), Positives = 22/45 (48%)
Query: 108 DVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEV 152
D +W+ + SV++D + IW + N+ + D T+E+
Sbjct: 378 DFSWNPNEPWVICSVSEDNIMQIWQM-AENIYNDEES-DVTTSEL 420
>UNIPROTKB|F1SQR0 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0070370 "cellular heat acclimation" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000122 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 KO:K11659 EMBL:CU463287 RefSeq:XP_003135004.1
ProteinModelPortal:F1SQR0 Ensembl:ENSSSCT00000013288
GeneID:100519001 KEGG:ssc:100519001 Uniprot:F1SQR0
Length = 425
Score = 872 (312.0 bits), Expect = 7.5e-101, Sum P(2) = 7.5e-101
Identities = 160/170 (94%), Positives = 165/170 (97%)
Query: 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166
+DVAWHLLHESLFGSVADDQKLMIWDTRS+ SKPSH VDAHTAEVNCLSFNPYSE+ILA
Sbjct: 230 EDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILA 289
Query: 167 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
TGSADKTVALWDLRNLKLKLH+FESHKDEIFQV WSPHNETILASSGTDRRL+VWDLSKI
Sbjct: 290 TGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKI 349
Query: 227 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276
GEEQS EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ
Sbjct: 350 GEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 399
Score = 148 (57.2 bits), Expect = 7.5e-101, Sum P(2) = 7.5e-101
Identities = 27/33 (81%), Positives = 30/33 (90%)
Query: 44 EPFDDAVEERVINEEYKIWKKNTPFLYDLVVNN 76
E F+D VEERVINEEYKIWKKNTPFLYDLV+ +
Sbjct: 5 EMFEDTVEERVINEEYKIWKKNTPFLYDLVMTH 37
Score = 122 (48.0 bits), Expect = 9.8e-16, Sum P(2) = 9.8e-16
Identities = 40/168 (23%), Positives = 76/168 (45%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDA------HTAEVNCLSFNPYSEYILATGSADKTV 174
S +DD + +WD + K VDA H+A V ++++ E + + + D+ +
Sbjct: 194 SASDDHTVCLWDINAG--PKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKL 251
Query: 175 ALWDLR-NLKLK-LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQST 232
+WD R N K H ++H E+ + ++P++E ILA+ D+ + +WDL + + T
Sbjct: 252 MIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHT 311
Query: 233 EDAEDGPPELLFIHGG-HTAKISDFSWNPNE--PWVICSVSEDNIMQE 277
E E+ +H H I S W + + E+ ++
Sbjct: 312 --FESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAED 357
Score = 116 (45.9 bits), Expect = 4.1e-15, Sum P(2) = 4.1e-15
Identities = 28/131 (21%), Positives = 64/131 (48%)
Query: 116 ESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVA 175
E + + + D+ + +WD R N+ HT ++H E+ + ++P++E ILA+ D+ +
Sbjct: 285 EFILATGSADKTVALWDLR--NLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLN 342
Query: 176 LWDLRNLKLKLHSFES-------------HKDEIFQVQWSPHNETILASSGTDRRLHVWD 222
+WDL + + + ++ H +I W+P+ ++ S D + +W
Sbjct: 343 VWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQ 402
Query: 223 LSK--IGEEQS 231
+++ +E+S
Sbjct: 403 MAENIYNDEES 413
Score = 100 (40.3 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 35/138 (25%), Positives = 59/138 (42%)
Query: 141 PSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDL----RNLKL--KLHSFESHKD 194
P + H E LS+N L + S D TV LWD+ + K+ F H
Sbjct: 168 PDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSA 227
Query: 195 EIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKIS 254
+ V W +E++ S D++L +WD + + P L+ HTA+++
Sbjct: 228 VVEDVAWHLLHESLFGSVADDQKLMIWD--------TRSNTTSKPSHLV---DAHTAEVN 276
Query: 255 DFSWNPNEPWVICSVSED 272
S+NP +++ + S D
Sbjct: 277 CLSFNPYSEFILATGSAD 294
Score = 92 (37.4 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 33/153 (21%), Positives = 65/153 (42%)
Query: 148 HTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHS---------FESHKDEIFQ 198
H EVN + P + +I+AT + V ++D K H+ E +
Sbjct: 122 HEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYG 181
Query: 199 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 258
+ W+ + L S+ D + +WD++ +E DA+ I GH+A + D +W
Sbjct: 182 LSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKA-------IFTGHSAVVEDVAW 234
Query: 259 NPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRL 291
+ + SV++D + + +++ +K L
Sbjct: 235 HLLHESLFGSVADDQKLMIWDTRSNTTSKPSHL 267
Score = 75 (31.5 bits), Expect = 7.3e-11, Sum P(2) = 7.3e-11
Identities = 17/82 (20%), Positives = 37/82 (45%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVD-----------AHTAEVNCLSF 157
V W +E++ S D++L +WD + + + HTA+++ S+
Sbjct: 322 VHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSW 381
Query: 158 NPYSEYILATGSADKTVALWDL 179
NP +++ + S D + +W +
Sbjct: 382 NPNEPWVICSVSEDNIMQIWQM 403
Score = 68 (29.0 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 20/83 (24%), Positives = 39/83 (46%)
Query: 191 SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHT 250
+H+ E+ + ++ P N I+A+ + V+D +K + + + P+L GH
Sbjct: 121 NHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTK--HPAKPDPSGECNPDLRL--RGHQ 176
Query: 251 AKISDFSWNPNEPWVICSVSEDN 273
+ SWN N + S S+D+
Sbjct: 177 KEGYGLSWNSNLSGHLLSASDDH 199
Score = 42 (19.8 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 11/45 (24%), Positives = 22/45 (48%)
Query: 108 DVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEV 152
D +W+ + SV++D + IW + N+ + D T+E+
Sbjct: 378 DFSWNPNEPWVICSVSEDNIMQIWQM-AENIYNDEES-DVTTSEL 420
>UNIPROTKB|Q4R304 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9541
"Macaca fascicularis" [GO:0016581 "NuRD complex" evidence=ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISS]
[GO:0035098 "ESC/E(Z) complex" evidence=ISS] [GO:0070370 "cellular
heat acclimation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0030308 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0035098 GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 HOVERGEN:HBG053236
EMBL:AB179464 ProteinModelPortal:Q4R304 SMR:Q4R304 PRIDE:Q4R304
Uniprot:Q4R304
Length = 425
Score = 872 (312.0 bits), Expect = 7.5e-101, Sum P(2) = 7.5e-101
Identities = 160/170 (94%), Positives = 165/170 (97%)
Query: 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166
+DVAWHLLHESLFGSVADDQKLMIWDTRS+ SKPSH VDAHTAEVNCLSFNPYSE+ILA
Sbjct: 230 EDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILA 289
Query: 167 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
TGSADKTVALWDLRNLKLKLH+FESHKDEIFQV WSPHNETILASSGTDRRL+VWDLSKI
Sbjct: 290 TGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKI 349
Query: 227 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276
GEEQS EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ
Sbjct: 350 GEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 399
Score = 148 (57.2 bits), Expect = 7.5e-101, Sum P(2) = 7.5e-101
Identities = 27/33 (81%), Positives = 30/33 (90%)
Query: 44 EPFDDAVEERVINEEYKIWKKNTPFLYDLVVNN 76
E F+D VEERVINEEYKIWKKNTPFLYDLV+ +
Sbjct: 5 EMFEDTVEERVINEEYKIWKKNTPFLYDLVMTH 37
Score = 122 (48.0 bits), Expect = 9.8e-16, Sum P(2) = 9.8e-16
Identities = 40/168 (23%), Positives = 76/168 (45%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDA------HTAEVNCLSFNPYSEYILATGSADKTV 174
S +DD + +WD + K VDA H+A V ++++ E + + + D+ +
Sbjct: 194 SASDDHTVCLWDINAG--PKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKL 251
Query: 175 ALWDLR-NLKLK-LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQST 232
+WD R N K H ++H E+ + ++P++E ILA+ D+ + +WDL + + T
Sbjct: 252 MIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHT 311
Query: 233 EDAEDGPPELLFIHGG-HTAKISDFSWNPNE--PWVICSVSEDNIMQE 277
E E+ +H H I S W + + E+ ++
Sbjct: 312 --FESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAED 357
Score = 116 (45.9 bits), Expect = 4.1e-15, Sum P(2) = 4.1e-15
Identities = 28/131 (21%), Positives = 64/131 (48%)
Query: 116 ESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVA 175
E + + + D+ + +WD R N+ HT ++H E+ + ++P++E ILA+ D+ +
Sbjct: 285 EFILATGSADKTVALWDLR--NLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLN 342
Query: 176 LWDLRNLKLKLHSFES-------------HKDEIFQVQWSPHNETILASSGTDRRLHVWD 222
+WDL + + + ++ H +I W+P+ ++ S D + +W
Sbjct: 343 VWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQ 402
Query: 223 LSK--IGEEQS 231
+++ +E+S
Sbjct: 403 MAENIYNDEES 413
Score = 100 (40.3 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 35/138 (25%), Positives = 59/138 (42%)
Query: 141 PSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDL----RNLKL--KLHSFESHKD 194
P + H E LS+N L + S D TV LWD+ + K+ F H
Sbjct: 168 PDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSA 227
Query: 195 EIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKIS 254
+ V W +E++ S D++L +WD + + P L+ HTA+++
Sbjct: 228 VVEDVAWHLLHESLFGSVADDQKLMIWD--------TRSNTTSKPSHLV---DAHTAEVN 276
Query: 255 DFSWNPNEPWVICSVSED 272
S+NP +++ + S D
Sbjct: 277 CLSFNPYSEFILATGSAD 294
Score = 92 (37.4 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 33/153 (21%), Positives = 65/153 (42%)
Query: 148 HTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHS---------FESHKDEIFQ 198
H EVN + P + +I+AT + V ++D K H+ E +
Sbjct: 122 HEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYG 181
Query: 199 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 258
+ W+ + L S+ D + +WD++ +E DA+ I GH+A + D +W
Sbjct: 182 LSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKA-------IFTGHSAVVEDVAW 234
Query: 259 NPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRL 291
+ + SV++D + + +++ +K L
Sbjct: 235 HLLHESLFGSVADDQKLMIWDTRSNTTSKPSHL 267
Score = 75 (31.5 bits), Expect = 7.3e-11, Sum P(2) = 7.3e-11
Identities = 17/82 (20%), Positives = 37/82 (45%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVD-----------AHTAEVNCLSF 157
V W +E++ S D++L +WD + + + HTA+++ S+
Sbjct: 322 VHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSW 381
Query: 158 NPYSEYILATGSADKTVALWDL 179
NP +++ + S D + +W +
Sbjct: 382 NPNEPWVICSVSEDNIMQIWQM 403
Score = 68 (29.0 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 20/83 (24%), Positives = 39/83 (46%)
Query: 191 SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHT 250
+H+ E+ + ++ P N I+A+ + V+D +K + + + P+L GH
Sbjct: 121 NHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTK--HPAKPDPSGECNPDLRL--RGHQ 176
Query: 251 AKISDFSWNPNEPWVICSVSEDN 273
+ SWN N + S S+D+
Sbjct: 177 KEGYGLSWNSNLSGHLLSASDDH 199
Score = 42 (19.8 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 11/45 (24%), Positives = 22/45 (48%)
Query: 108 DVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEV 152
D +W+ + SV++D + IW + N+ + D T+E+
Sbjct: 378 DFSWNPNEPWVICSVSEDNIMQIWQM-AENIYNDEES-DVTTSEL 420
>RGD|620125 [details] [associations]
symbol:Rbbp7 "retinoblastoma binding protein 7" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=ISO;ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISO;ISS]
[GO:0035098 "ESC/E(Z) complex" evidence=ISO;ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0070370 "cellular heat acclimation" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:620125 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931
KO:K11659 EMBL:AF090306 EMBL:BC062012 IPI:IPI00194285
RefSeq:NP_114004.1 UniGene:Rn.3600 ProteinModelPortal:Q71UF4
SMR:Q71UF4 STRING:Q71UF4 PRIDE:Q71UF4 Ensembl:ENSRNOT00000066676
GeneID:83712 KEGG:rno:83712 UCSC:RGD:620125 InParanoid:Q71UF4
NextBio:616281 ArrayExpress:Q71UF4 Genevestigator:Q71UF4
GermOnline:ENSRNOG00000005157 Uniprot:Q71UF4
Length = 425
Score = 872 (312.0 bits), Expect = 7.5e-101, Sum P(2) = 7.5e-101
Identities = 160/170 (94%), Positives = 165/170 (97%)
Query: 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166
+DVAWHLLHESLFGSVADDQKLMIWDTRS+ SKPSH VDAHTAEVNCLSFNPYSE+ILA
Sbjct: 230 EDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILA 289
Query: 167 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
TGSADKTVALWDLRNLKLKLH+FESHKDEIFQV WSPHNETILASSGTDRRL+VWDLSKI
Sbjct: 290 TGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKI 349
Query: 227 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276
GEEQS EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ
Sbjct: 350 GEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 399
Score = 148 (57.2 bits), Expect = 7.5e-101, Sum P(2) = 7.5e-101
Identities = 27/33 (81%), Positives = 30/33 (90%)
Query: 44 EPFDDAVEERVINEEYKIWKKNTPFLYDLVVNN 76
E F+D VEERVINEEYKIWKKNTPFLYDLV+ +
Sbjct: 5 EMFEDTVEERVINEEYKIWKKNTPFLYDLVMTH 37
Score = 122 (48.0 bits), Expect = 9.8e-16, Sum P(2) = 9.8e-16
Identities = 40/168 (23%), Positives = 76/168 (45%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDA------HTAEVNCLSFNPYSEYILATGSADKTV 174
S +DD + +WD + K VDA H+A V ++++ E + + + D+ +
Sbjct: 194 SASDDHTVCLWDINAG--PKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKL 251
Query: 175 ALWDLR-NLKLK-LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQST 232
+WD R N K H ++H E+ + ++P++E ILA+ D+ + +WDL + + T
Sbjct: 252 MIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHT 311
Query: 233 EDAEDGPPELLFIHGG-HTAKISDFSWNPNE--PWVICSVSEDNIMQE 277
E E+ +H H I S W + + E+ ++
Sbjct: 312 --FESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAED 357
Score = 116 (45.9 bits), Expect = 4.1e-15, Sum P(2) = 4.1e-15
Identities = 28/131 (21%), Positives = 64/131 (48%)
Query: 116 ESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVA 175
E + + + D+ + +WD R N+ HT ++H E+ + ++P++E ILA+ D+ +
Sbjct: 285 EFILATGSADKTVALWDLR--NLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLN 342
Query: 176 LWDLRNLKLKLHSFES-------------HKDEIFQVQWSPHNETILASSGTDRRLHVWD 222
+WDL + + + ++ H +I W+P+ ++ S D + +W
Sbjct: 343 VWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQ 402
Query: 223 LSK--IGEEQS 231
+++ +E+S
Sbjct: 403 MAENIYNDEES 413
Score = 100 (40.3 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 35/138 (25%), Positives = 59/138 (42%)
Query: 141 PSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDL----RNLKL--KLHSFESHKD 194
P + H E LS+N L + S D TV LWD+ + K+ F H
Sbjct: 168 PDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSA 227
Query: 195 EIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKIS 254
+ V W +E++ S D++L +WD + + P L+ HTA+++
Sbjct: 228 VVEDVAWHLLHESLFGSVADDQKLMIWD--------TRSNTTSKPSHLV---DAHTAEVN 276
Query: 255 DFSWNPNEPWVICSVSED 272
S+NP +++ + S D
Sbjct: 277 CLSFNPYSEFILATGSAD 294
Score = 92 (37.4 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 33/153 (21%), Positives = 65/153 (42%)
Query: 148 HTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHS---------FESHKDEIFQ 198
H EVN + P + +I+AT + V ++D K H+ E +
Sbjct: 122 HEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYG 181
Query: 199 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 258
+ W+ + L S+ D + +WD++ +E DA+ I GH+A + D +W
Sbjct: 182 LSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKA-------IFTGHSAVVEDVAW 234
Query: 259 NPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRL 291
+ + SV++D + + +++ +K L
Sbjct: 235 HLLHESLFGSVADDQKLMIWDTRSNTTSKPSHL 267
Score = 75 (31.5 bits), Expect = 7.3e-11, Sum P(2) = 7.3e-11
Identities = 17/82 (20%), Positives = 37/82 (45%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVD-----------AHTAEVNCLSF 157
V W +E++ S D++L +WD + + + HTA+++ S+
Sbjct: 322 VHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSW 381
Query: 158 NPYSEYILATGSADKTVALWDL 179
NP +++ + S D + +W +
Sbjct: 382 NPNEPWVICSVSEDNIMQIWQM 403
Score = 68 (29.0 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 20/83 (24%), Positives = 39/83 (46%)
Query: 191 SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHT 250
+H+ E+ + ++ P N I+A+ + V+D +K + + + P+L GH
Sbjct: 121 NHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTK--HPAKPDPSGECNPDLRL--RGHQ 176
Query: 251 AKISDFSWNPNEPWVICSVSEDN 273
+ SWN N + S S+D+
Sbjct: 177 KEGYGLSWNSNLSGHLLSASDDH 199
Score = 42 (19.8 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 11/45 (24%), Positives = 22/45 (48%)
Query: 108 DVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEV 152
D +W+ + SV++D + IW + N+ + D T+E+
Sbjct: 378 DFSWNPNEPWVICSVSEDNIMQIWQM-AENIYNDEES-DVTTSEL 420
>MGI|MGI:1194910 [details] [associations]
symbol:Rbbp7 "retinoblastoma binding protein 7"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=TAS] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016581
"NuRD complex" evidence=ISO;IDA] [GO:0030308 "negative regulation
of cell growth" evidence=ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0070370 "cellular heat
acclimation" evidence=ISO;ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1194910 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338 GO:GO:0000122
GO:GO:0035098 GeneTree:ENSGT00570000079069 GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 HOGENOM:HOG000160330
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:U35142
EMBL:AK076016 EMBL:AK135779 EMBL:AK135956 EMBL:AK136110
EMBL:AK145531 EMBL:AK145651 EMBL:AK146014 EMBL:AK146904
EMBL:AK146967 EMBL:AK147062 EMBL:AK148852 EMBL:AK153913
EMBL:AK160023 EMBL:AL672123 EMBL:BC003785 IPI:IPI00122698
PIR:I49367 RefSeq:NP_033057.3 UniGene:Mm.270186 UniGene:Mm.486181
ProteinModelPortal:Q60973 SMR:Q60973 IntAct:Q60973 STRING:Q60973
PhosphoSite:Q60973 REPRODUCTION-2DPAGE:Q60973 PaxDb:Q60973
PRIDE:Q60973 Ensembl:ENSMUST00000033720 GeneID:245688
KEGG:mmu:245688 InParanoid:A2AFJ0 NextBio:386918 Bgee:Q60973
CleanEx:MM_RBBP7 Genevestigator:Q60973
GermOnline:ENSMUSG00000031353 Uniprot:Q60973
Length = 425
Score = 872 (312.0 bits), Expect = 7.5e-101, Sum P(2) = 7.5e-101
Identities = 160/170 (94%), Positives = 165/170 (97%)
Query: 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166
+DVAWHLLHESLFGSVADDQKLMIWDTRS+ SKPSH VDAHTAEVNCLSFNPYSE+ILA
Sbjct: 230 EDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILA 289
Query: 167 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
TGSADKTVALWDLRNLKLKLH+FESHKDEIFQV WSPHNETILASSGTDRRL+VWDLSKI
Sbjct: 290 TGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKI 349
Query: 227 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276
GEEQS EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ
Sbjct: 350 GEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 399
Score = 148 (57.2 bits), Expect = 7.5e-101, Sum P(2) = 7.5e-101
Identities = 27/33 (81%), Positives = 30/33 (90%)
Query: 44 EPFDDAVEERVINEEYKIWKKNTPFLYDLVVNN 76
E F+D VEERVINEEYKIWKKNTPFLYDLV+ +
Sbjct: 5 EMFEDTVEERVINEEYKIWKKNTPFLYDLVMTH 37
Score = 122 (48.0 bits), Expect = 9.8e-16, Sum P(2) = 9.8e-16
Identities = 40/168 (23%), Positives = 76/168 (45%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDA------HTAEVNCLSFNPYSEYILATGSADKTV 174
S +DD + +WD + K VDA H+A V ++++ E + + + D+ +
Sbjct: 194 SASDDHTVCLWDINAG--PKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKL 251
Query: 175 ALWDLR-NLKLK-LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQST 232
+WD R N K H ++H E+ + ++P++E ILA+ D+ + +WDL + + T
Sbjct: 252 MIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHT 311
Query: 233 EDAEDGPPELLFIHGG-HTAKISDFSWNPNE--PWVICSVSEDNIMQE 277
E E+ +H H I S W + + E+ ++
Sbjct: 312 --FESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAED 357
Score = 118 (46.6 bits), Expect = 2.6e-15, Sum P(2) = 2.6e-15
Identities = 29/137 (21%), Positives = 66/137 (48%)
Query: 116 ESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVA 175
E + + + D+ + +WD R N+ HT ++H E+ + ++P++E ILA+ D+ +
Sbjct: 285 EFILATGSADKTVALWDLR--NLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLN 342
Query: 176 LWDLRNLKLKLHSFES-------------HKDEIFQVQWSPHNETILASSGTDRRLHVWD 222
+WDL + + + ++ H +I W+P+ ++ S D + +W
Sbjct: 343 VWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQ 402
Query: 223 LSK--IGEEQSTEDAED 237
+++ +E+S A +
Sbjct: 403 MAENIYNDEESDVTASE 419
Score = 100 (40.3 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 35/138 (25%), Positives = 59/138 (42%)
Query: 141 PSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDL----RNLKL--KLHSFESHKD 194
P + H E LS+N L + S D TV LWD+ + K+ F H
Sbjct: 168 PDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSA 227
Query: 195 EIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKIS 254
+ V W +E++ S D++L +WD + + P L+ HTA+++
Sbjct: 228 VVEDVAWHLLHESLFGSVADDQKLMIWD--------TRSNTTSKPSHLV---DAHTAEVN 276
Query: 255 DFSWNPNEPWVICSVSED 272
S+NP +++ + S D
Sbjct: 277 CLSFNPYSEFILATGSAD 294
Score = 92 (37.4 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 33/153 (21%), Positives = 65/153 (42%)
Query: 148 HTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHS---------FESHKDEIFQ 198
H EVN + P + +I+AT + V ++D K H+ E +
Sbjct: 122 HEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYG 181
Query: 199 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 258
+ W+ + L S+ D + +WD++ +E DA+ I GH+A + D +W
Sbjct: 182 LSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKA-------IFTGHSAVVEDVAW 234
Query: 259 NPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRL 291
+ + SV++D + + +++ +K L
Sbjct: 235 HLLHESLFGSVADDQKLMIWDTRSNTTSKPSHL 267
Score = 75 (31.5 bits), Expect = 7.3e-11, Sum P(2) = 7.3e-11
Identities = 17/82 (20%), Positives = 37/82 (45%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVD-----------AHTAEVNCLSF 157
V W +E++ S D++L +WD + + + HTA+++ S+
Sbjct: 322 VHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSW 381
Query: 158 NPYSEYILATGSADKTVALWDL 179
NP +++ + S D + +W +
Sbjct: 382 NPNEPWVICSVSEDNIMQIWQM 403
Score = 68 (29.0 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 20/83 (24%), Positives = 39/83 (46%)
Query: 191 SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHT 250
+H+ E+ + ++ P N I+A+ + V+D +K + + + P+L GH
Sbjct: 121 NHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTK--HPAKPDPSGECNPDLRL--RGHQ 176
Query: 251 AKISDFSWNPNEPWVICSVSEDN 273
+ SWN N + S S+D+
Sbjct: 177 KEGYGLSWNSNLSGHLLSASDDH 199
Score = 38 (18.4 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 10/44 (22%), Positives = 18/44 (40%)
Query: 108 DVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAE 151
D +W+ + SV++D + IW + + V A E
Sbjct: 378 DFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTASELE 421
>UNIPROTKB|E2RM67 [details] [associations]
symbol:RBBP7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070370 "cellular heat acclimation"
evidence=IEA] [GO:0035098 "ESC/E(Z) complex" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000122 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 OMA:DGFLLHV CTD:5931 KO:K11659 EMBL:AAEX03026166
GeneID:480854 KEGG:cfa:480854 NextBio:20855780 RefSeq:XP_849201.1
ProteinModelPortal:E2RM67 Ensembl:ENSCAFT00000020227 Uniprot:E2RM67
Length = 469
Score = 872 (312.0 bits), Expect = 1.6e-100, Sum P(2) = 1.6e-100
Identities = 160/170 (94%), Positives = 165/170 (97%)
Query: 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166
+DVAWHLLHESLFGSVADDQKLMIWDTRS+ SKPSH VDAHTAEVNCLSFNPYSE+ILA
Sbjct: 274 EDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILA 333
Query: 167 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
TGSADKTVALWDLRNLKLKLH+FESHKDEIFQV WSPHNETILASSGTDRRL+VWDLSKI
Sbjct: 334 TGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKI 393
Query: 227 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276
GEEQS EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ
Sbjct: 394 GEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 443
Score = 145 (56.1 bits), Expect = 1.6e-100, Sum P(2) = 1.6e-100
Identities = 26/31 (83%), Positives = 29/31 (93%)
Query: 46 FDDAVEERVINEEYKIWKKNTPFLYDLVVNN 76
F+D VEERVINEEYKIWKKNTPFLYDLV+ +
Sbjct: 51 FEDTVEERVINEEYKIWKKNTPFLYDLVMTH 81
Score = 122 (48.0 bits), Expect = 3.0e-15, Sum P(2) = 3.0e-15
Identities = 40/168 (23%), Positives = 76/168 (45%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDA------HTAEVNCLSFNPYSEYILATGSADKTV 174
S +DD + +WD + K VDA H+A V ++++ E + + + D+ +
Sbjct: 238 SASDDHTVCLWDINAG--PKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKL 295
Query: 175 ALWDLR-NLKLK-LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQST 232
+WD R N K H ++H E+ + ++P++E ILA+ D+ + +WDL + + T
Sbjct: 296 MIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHT 355
Query: 233 EDAEDGPPELLFIHGG-HTAKISDFSWNPNE--PWVICSVSEDNIMQE 277
E E+ +H H I S W + + E+ ++
Sbjct: 356 --FESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAED 401
Score = 116 (45.9 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 28/131 (21%), Positives = 64/131 (48%)
Query: 116 ESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVA 175
E + + + D+ + +WD R N+ HT ++H E+ + ++P++E ILA+ D+ +
Sbjct: 329 EFILATGSADKTVALWDLR--NLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLN 386
Query: 176 LWDLRNLKLKLHSFES-------------HKDEIFQVQWSPHNETILASSGTDRRLHVWD 222
+WDL + + + ++ H +I W+P+ ++ S D + +W
Sbjct: 387 VWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQ 446
Query: 223 LSK--IGEEQS 231
+++ +E+S
Sbjct: 447 MAENIYNDEES 457
Score = 100 (40.3 bits), Expect = 5.8e-13, Sum P(2) = 5.8e-13
Identities = 35/138 (25%), Positives = 59/138 (42%)
Query: 141 PSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDL----RNLKL--KLHSFESHKD 194
P + H E LS+N L + S D TV LWD+ + K+ F H
Sbjct: 212 PDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSA 271
Query: 195 EIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKIS 254
+ V W +E++ S D++L +WD + + P L+ HTA+++
Sbjct: 272 VVEDVAWHLLHESLFGSVADDQKLMIWD--------TRSNTTSKPSHLV---DAHTAEVN 320
Query: 255 DFSWNPNEPWVICSVSED 272
S+NP +++ + S D
Sbjct: 321 CLSFNPYSEFILATGSAD 338
Score = 92 (37.4 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
Identities = 33/153 (21%), Positives = 65/153 (42%)
Query: 148 HTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHS---------FESHKDEIFQ 198
H EVN + P + +I+AT + V ++D K H+ E +
Sbjct: 166 HEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYG 225
Query: 199 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 258
+ W+ + L S+ D + +WD++ +E DA+ I GH+A + D +W
Sbjct: 226 LSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKA-------IFTGHSAVVEDVAW 278
Query: 259 NPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRL 291
+ + SV++D + + +++ +K L
Sbjct: 279 HLLHESLFGSVADDQKLMIWDTRSNTTSKPSHL 311
Score = 75 (31.5 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 17/82 (20%), Positives = 37/82 (45%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVD-----------AHTAEVNCLSF 157
V W +E++ S D++L +WD + + + HTA+++ S+
Sbjct: 366 VHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSW 425
Query: 158 NPYSEYILATGSADKTVALWDL 179
NP +++ + S D + +W +
Sbjct: 426 NPNEPWVICSVSEDNIMQIWQM 447
Score = 68 (29.0 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 20/83 (24%), Positives = 39/83 (46%)
Query: 191 SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHT 250
+H+ E+ + ++ P N I+A+ + V+D +K + + + P+L GH
Sbjct: 165 NHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTK--HPAKPDPSGECNPDLRL--RGHQ 220
Query: 251 AKISDFSWNPNEPWVICSVSEDN 273
+ SWN N + S S+D+
Sbjct: 221 KEGYGLSWNSNLSGHLLSASDDH 243
Score = 42 (19.8 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 11/45 (24%), Positives = 22/45 (48%)
Query: 108 DVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEV 152
D +W+ + SV++D + IW + N+ + D T+E+
Sbjct: 422 DFSWNPNEPWVICSVSEDNIMQIWQM-AENIYNDEES-DVTTSEL 464
>UNIPROTKB|I3LV46 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00570000079069
InterPro:IPR022052 Pfam:PF12265 OMA:DGFLLHV KO:K11659 EMBL:CU463287
GeneID:100519001 KEGG:ssc:100519001 RefSeq:XP_003360284.1
Ensembl:ENSSSCT00000024779 Uniprot:I3LV46
Length = 469
Score = 872 (312.0 bits), Expect = 1.6e-100, Sum P(2) = 1.6e-100
Identities = 160/170 (94%), Positives = 165/170 (97%)
Query: 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166
+DVAWHLLHESLFGSVADDQKLMIWDTRS+ SKPSH VDAHTAEVNCLSFNPYSE+ILA
Sbjct: 274 EDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILA 333
Query: 167 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
TGSADKTVALWDLRNLKLKLH+FESHKDEIFQV WSPHNETILASSGTDRRL+VWDLSKI
Sbjct: 334 TGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKI 393
Query: 227 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276
GEEQS EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ
Sbjct: 394 GEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 443
Score = 145 (56.1 bits), Expect = 1.6e-100, Sum P(2) = 1.6e-100
Identities = 26/31 (83%), Positives = 29/31 (93%)
Query: 46 FDDAVEERVINEEYKIWKKNTPFLYDLVVNN 76
F+D VEERVINEEYKIWKKNTPFLYDLV+ +
Sbjct: 51 FEDTVEERVINEEYKIWKKNTPFLYDLVMTH 81
Score = 122 (48.0 bits), Expect = 3.0e-15, Sum P(2) = 3.0e-15
Identities = 40/168 (23%), Positives = 76/168 (45%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDA------HTAEVNCLSFNPYSEYILATGSADKTV 174
S +DD + +WD + K VDA H+A V ++++ E + + + D+ +
Sbjct: 238 SASDDHTVCLWDINAG--PKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKL 295
Query: 175 ALWDLR-NLKLK-LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQST 232
+WD R N K H ++H E+ + ++P++E ILA+ D+ + +WDL + + T
Sbjct: 296 MIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHT 355
Query: 233 EDAEDGPPELLFIHGG-HTAKISDFSWNPNE--PWVICSVSEDNIMQE 277
E E+ +H H I S W + + E+ ++
Sbjct: 356 --FESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAED 401
Score = 116 (45.9 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 28/131 (21%), Positives = 64/131 (48%)
Query: 116 ESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVA 175
E + + + D+ + +WD R N+ HT ++H E+ + ++P++E ILA+ D+ +
Sbjct: 329 EFILATGSADKTVALWDLR--NLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLN 386
Query: 176 LWDLRNLKLKLHSFES-------------HKDEIFQVQWSPHNETILASSGTDRRLHVWD 222
+WDL + + + ++ H +I W+P+ ++ S D + +W
Sbjct: 387 VWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQ 446
Query: 223 LSK--IGEEQS 231
+++ +E+S
Sbjct: 447 MAENIYNDEES 457
Score = 100 (40.3 bits), Expect = 5.8e-13, Sum P(2) = 5.8e-13
Identities = 35/138 (25%), Positives = 59/138 (42%)
Query: 141 PSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDL----RNLKL--KLHSFESHKD 194
P + H E LS+N L + S D TV LWD+ + K+ F H
Sbjct: 212 PDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSA 271
Query: 195 EIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKIS 254
+ V W +E++ S D++L +WD + + P L+ HTA+++
Sbjct: 272 VVEDVAWHLLHESLFGSVADDQKLMIWD--------TRSNTTSKPSHLV---DAHTAEVN 320
Query: 255 DFSWNPNEPWVICSVSED 272
S+NP +++ + S D
Sbjct: 321 CLSFNPYSEFILATGSAD 338
Score = 92 (37.4 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
Identities = 33/153 (21%), Positives = 65/153 (42%)
Query: 148 HTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHS---------FESHKDEIFQ 198
H EVN + P + +I+AT + V ++D K H+ E +
Sbjct: 166 HEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYG 225
Query: 199 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 258
+ W+ + L S+ D + +WD++ +E DA+ I GH+A + D +W
Sbjct: 226 LSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKA-------IFTGHSAVVEDVAW 278
Query: 259 NPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRL 291
+ + SV++D + + +++ +K L
Sbjct: 279 HLLHESLFGSVADDQKLMIWDTRSNTTSKPSHL 311
Score = 75 (31.5 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 17/82 (20%), Positives = 37/82 (45%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVD-----------AHTAEVNCLSF 157
V W +E++ S D++L +WD + + + HTA+++ S+
Sbjct: 366 VHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSW 425
Query: 158 NPYSEYILATGSADKTVALWDL 179
NP +++ + S D + +W +
Sbjct: 426 NPNEPWVICSVSEDNIMQIWQM 447
Score = 68 (29.0 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 20/83 (24%), Positives = 39/83 (46%)
Query: 191 SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHT 250
+H+ E+ + ++ P N I+A+ + V+D +K + + + P+L GH
Sbjct: 165 NHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTK--HPAKPDPSGECNPDLRL--RGHQ 220
Query: 251 AKISDFSWNPNEPWVICSVSEDN 273
+ SWN N + S S+D+
Sbjct: 221 KEGYGLSWNSNLSGHLLSASDDH 243
Score = 42 (19.8 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 11/45 (24%), Positives = 22/45 (48%)
Query: 108 DVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEV 152
D +W+ + SV++D + IW + N+ + D T+E+
Sbjct: 422 DFSWNPNEPWVICSVSEDNIMQIWQM-AENIYNDEES-DVTTSEL 464
>UNIPROTKB|Q9I8G9 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9031
"Gallus gallus" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0030308
"negative regulation of cell growth" evidence=IEA] [GO:0070370
"cellular heat acclimation" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0016581 "NuRD complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 OMA:DGFLLHV HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:AF279275 IPI:IPI00594478
PIR:JC7558 RefSeq:NP_990001.1 UniGene:Gga.202
ProteinModelPortal:Q9I8G9 SMR:Q9I8G9 STRING:Q9I8G9 PRIDE:Q9I8G9
Ensembl:ENSGALT00000026698 GeneID:395390 KEGG:gga:395390
InParanoid:Q9I8G9 NextBio:20815474 Uniprot:Q9I8G9
Length = 424
Score = 877 (313.8 bits), Expect = 3.2e-100, Sum P(2) = 3.2e-100
Identities = 161/170 (94%), Positives = 166/170 (97%)
Query: 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166
+DVAWHLLHESLFGSVADDQKLMIWDTRS+ SKPSH+VDAHTAEVNCLSFNPYSE+ILA
Sbjct: 229 EDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILA 288
Query: 167 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
TGSADKTVALWDLRNLKLKLHSFESHKDEIFQV WSPHNETILASSGTDRRL+VWDLSKI
Sbjct: 289 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKI 348
Query: 227 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276
GEEQS EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ
Sbjct: 349 GEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 398
Score = 137 (53.3 bits), Expect = 3.2e-100, Sum P(2) = 3.2e-100
Identities = 25/33 (75%), Positives = 29/33 (87%)
Query: 44 EPFDDAVEERVINEEYKIWKKNTPFLYDLVVNN 76
E +D VEERVI+EEYKIWKKNTPFLYDLV+ +
Sbjct: 5 EVLEDTVEERVISEEYKIWKKNTPFLYDLVMTH 37
Score = 127 (49.8 bits), Expect = 5.3e-15, Sum P(2) = 5.3e-15
Identities = 42/169 (24%), Positives = 79/169 (46%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDA------HTAEVNCLSFNPYSEYILATGSADKTV 174
S +DD + +WD + K VDA H+A V ++++ E + + + D+ +
Sbjct: 193 SASDDHTVCLWDISAG--PKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKL 250
Query: 175 ALWDLR-NLKLK-LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEE-QS 231
+WD R N K HS ++H E+ + ++P++E ILA+ D+ + +WDL + + S
Sbjct: 251 MIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHS 310
Query: 232 TEDAEDGPPELLFIHGG-HTAKISDFSWNPNE--PWVICSVSEDNIMQE 277
E +D E+ +H H I S W + + E+ ++
Sbjct: 311 FESHKD---EIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAED 356
Score = 111 (44.1 bits), Expect = 2.4e-13, Sum P(2) = 2.4e-13
Identities = 25/123 (20%), Positives = 60/123 (48%)
Query: 116 ESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVA 175
E + + + D+ + +WD R N+ H+ ++H E+ + ++P++E ILA+ D+ +
Sbjct: 284 EFILATGSADKTVALWDLR--NLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLN 341
Query: 176 LWDLRNLKLKLHSFES-------------HKDEIFQVQWSPHNETILASSGTDRRLHVWD 222
+WDL + + + ++ H +I W+P+ ++ S D + +W
Sbjct: 342 VWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQ 401
Query: 223 LSK 225
+++
Sbjct: 402 MAE 404
Score = 97 (39.2 bits), Expect = 6.8e-12, Sum P(2) = 6.8e-12
Identities = 34/149 (22%), Positives = 65/149 (43%)
Query: 148 HTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHS---------FESHKDEIFQ 198
H EVN + P + YI+AT + V ++D K H+ E +
Sbjct: 121 HEGEVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYG 180
Query: 199 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 258
+ W+ + + L S+ D + +WD+S +E DA+ I GH+A + D +W
Sbjct: 181 LSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKA-------IFTGHSAVVEDVAW 233
Query: 259 NPNEPWVICSVSEDNIMQEYCDSTDSDTK 287
+ + SV++D + + +++ +K
Sbjct: 234 HLLHESLFGSVADDQKLMIWDTRSNTTSK 262
Score = 95 (38.5 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 33/138 (23%), Positives = 58/138 (42%)
Query: 141 PSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDL----RNLKL--KLHSFESHKD 194
P + H E LS+N + L + S D TV LWD+ + K+ F H
Sbjct: 167 PDLRLRGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSA 226
Query: 195 EIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKIS 254
+ V W +E++ S D++L +WD + + + HTA+++
Sbjct: 227 VVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVD-----------AHTAEVN 275
Query: 255 DFSWNPNEPWVICSVSED 272
S+NP +++ + S D
Sbjct: 276 CLSFNPYSEFILATGSAD 293
Score = 75 (31.5 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 17/82 (20%), Positives = 37/82 (45%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVD-----------AHTAEVNCLSF 157
V W +E++ S D++L +WD + + + HTA+++ S+
Sbjct: 321 VHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSW 380
Query: 158 NPYSEYILATGSADKTVALWDL 179
NP +++ + S D + +W +
Sbjct: 381 NPNEPWVICSVSEDNIMQIWQM 402
Score = 69 (29.3 bits), Expect = 5.3e-09, Sum P(2) = 5.3e-09
Identities = 20/83 (24%), Positives = 39/83 (46%)
Query: 191 SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHT 250
+H+ E+ + ++ P N I+A+ + V+D +K + + + P+L GH
Sbjct: 120 NHEGEVNRARYMPQNPYIIATKTPSADVLVFDYTK--HPSKPDPSGECNPDLRL--RGHQ 175
Query: 251 AKISDFSWNPNEPWVICSVSEDN 273
+ SWN N + S S+D+
Sbjct: 176 KEGYGLSWNSNLKGHLLSASDDH 198
Score = 37 (18.1 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 7/24 (29%), Positives = 13/24 (54%)
Query: 108 DVAWHLLHESLFGSVADDQKLMIW 131
D +W+ + SV++D + IW
Sbjct: 377 DFSWNPNEPWVICSVSEDNIMQIW 400
>UNIPROTKB|Q5R654 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9601
"Pongo abelii" [GO:0016581 "NuRD complex" evidence=ISS] [GO:0030308
"negative regulation of cell growth" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] [GO:0070370 "cellular heat
acclimation" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0035098 GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 HOVERGEN:HBG053236 EMBL:CR860642 UniGene:Pab.19680
ProteinModelPortal:Q5R654 InParanoid:Q5R654 Uniprot:Q5R654
Length = 426
Score = 860 (307.8 bits), Expect = 1.4e-99, Sum P(2) = 1.4e-99
Identities = 159/171 (92%), Positives = 165/171 (96%)
Query: 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166
+DVAWHLLHESLFGSVADDQKLM+WDTRS+ SKPSH VDAHTAEVNCLSFNPYSE+ILA
Sbjct: 230 EDVAWHLLHESLFGSVADDQKLMMWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILA 289
Query: 167 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQV-QWSPHNETILASSGTDRRLHVWDLSK 225
TGSADKTVALWDLRNLKLKLH+FESHKDEIFQV WSPHNETILASSGTDRRL+VWDLSK
Sbjct: 290 TGSADKTVALWDLRNLKLKLHTFESHKDEIFQVVHWSPHNETILASSGTDRRLNVWDLSK 349
Query: 226 IGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276
IGEEQS EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ
Sbjct: 350 IGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 400
Score = 148 (57.2 bits), Expect = 1.4e-99, Sum P(2) = 1.4e-99
Identities = 27/33 (81%), Positives = 30/33 (90%)
Query: 44 EPFDDAVEERVINEEYKIWKKNTPFLYDLVVNN 76
E F+D VEERVINEEYKIWKKNTPFLYDLV+ +
Sbjct: 5 EMFEDTVEERVINEEYKIWKKNTPFLYDLVMTH 37
Score = 120 (47.3 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 31/114 (27%), Positives = 59/114 (51%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDA------HTAEVNCLSFNPYSEYILATGSADKTV 174
S +DD + +WD + K VDA H+A V ++++ E + + + D+ +
Sbjct: 194 SASDDHTVCLWDINAG--PKEGKIVDAKAVFTGHSAVVEDVAWHLLHESLFGSVADDQKL 251
Query: 175 ALWDLR-NLKLK-LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
+WD R N K H ++H E+ + ++P++E ILA+ D+ + +WDL +
Sbjct: 252 MMWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL 305
Score = 112 (44.5 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 28/132 (21%), Positives = 64/132 (48%)
Query: 116 ESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEV-NCLSFNPYSEYILATGSADKTV 174
E + + + D+ + +WD R N+ HT ++H E+ + ++P++E ILA+ D+ +
Sbjct: 285 EFILATGSADKTVALWDLR--NLKLKLHTFESHKDEIFQVVHWSPHNETILASSGTDRRL 342
Query: 175 ALWDLRNLKLKLHSFES-------------HKDEIFQVQWSPHNETILASSGTDRRLHVW 221
+WDL + + + ++ H +I W+P+ ++ S D + +W
Sbjct: 343 NVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIW 402
Query: 222 DLSK--IGEEQS 231
+++ +E+S
Sbjct: 403 QMAENIYNDEES 414
Score = 98 (39.6 bits), Expect = 3.1e-13, Sum P(2) = 3.1e-13
Identities = 35/138 (25%), Positives = 59/138 (42%)
Query: 141 PSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDL----RNLKL--KLHSFESHKD 194
P + H E LS+N L + S D TV LWD+ + K+ F H
Sbjct: 168 PDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAVFTGHSA 227
Query: 195 EIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKIS 254
+ V W +E++ S D++L +WD + + P L+ HTA+++
Sbjct: 228 VVEDVAWHLLHESLFGSVADDQKLMMWD--------TRSNTTSKPSHLV---DAHTAEVN 276
Query: 255 DFSWNPNEPWVICSVSED 272
S+NP +++ + S D
Sbjct: 277 CLSFNPYSEFILATGSAD 294
Score = 91 (37.1 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 32/153 (20%), Positives = 65/153 (42%)
Query: 148 HTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHS---------FESHKDEIFQ 198
H EVN + P + +I+AT + V ++D K H+ E +
Sbjct: 122 HEGEVNRARYMPQNPHIIATKTPSSGVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYG 181
Query: 199 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 258
+ W+ + L S+ D + +WD++ +E DA+ + GH+A + D +W
Sbjct: 182 LSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKA-------VFTGHSAVVEDVAW 234
Query: 259 NPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRL 291
+ + SV++D + + +++ +K L
Sbjct: 235 HLLHESLFGSVADDQKLMMWDTRSNTTSKPSHL 267
Score = 77 (32.2 bits), Expect = 4.6e-11, Sum P(2) = 4.6e-11
Identities = 18/84 (21%), Positives = 38/84 (45%)
Query: 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVD-----------AHTAEVNCL 155
Q V W +E++ S D++L +WD + + + HTA+++
Sbjct: 321 QVVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDF 380
Query: 156 SFNPYSEYILATGSADKTVALWDL 179
S+NP +++ + S D + +W +
Sbjct: 381 SWNPNEPWVICSVSEDNIMQIWQM 404
Score = 68 (29.0 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 20/83 (24%), Positives = 39/83 (46%)
Query: 191 SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHT 250
+H+ E+ + ++ P N I+A+ + V+D +K + + + P+L GH
Sbjct: 121 NHEGEVNRARYMPQNPHIIATKTPSSGVLVFDYTK--HPAKPDPSGECNPDLRL--RGHQ 176
Query: 251 AKISDFSWNPNEPWVICSVSEDN 273
+ SWN N + S S+D+
Sbjct: 177 KEGYGLSWNSNLSGHLLSASDDH 199
>RGD|1563620 [details] [associations]
symbol:RGD1563620 "similar to retinoblastoma binding protein 4"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1563620 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00570000079069
InterPro:IPR022052 Pfam:PF12265 OrthoDB:EOG4DBTDH IPI:IPI00368073
ProteinModelPortal:D4A250 Ensembl:ENSRNOT00000033132 Uniprot:D4A250
Length = 425
Score = 860 (307.8 bits), Expect = 8.7e-98, Sum P(2) = 8.7e-98
Identities = 158/170 (92%), Positives = 166/170 (97%)
Query: 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166
+DV+WHLLHESLFGSVADDQKLMIWDTRS+N SKPSH+VDA+TAEVNCLSFNP SE+ILA
Sbjct: 231 EDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAYTAEVNCLSFNPNSEFILA 290
Query: 167 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
+GS DKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRL+VWDLSKI
Sbjct: 291 SGSPDKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKI 350
Query: 227 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276
GEEQS EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ
Sbjct: 351 GEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 400
Score = 132 (51.5 bits), Expect = 7.6e-15, Sum P(2) = 7.6e-15
Identities = 34/126 (26%), Positives = 63/126 (50%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDA------HTAEVNCLSFNPYSE 162
++W+ S +DD + +WD + V K V A HTA V +S++ E
Sbjct: 183 LSWNPYLSGYLLSASDDHTICLWDISA--VPKEGKVVGAKTIFTGHTAVVEDVSWHLLHE 240
Query: 163 YILATGSADKTVALWDLR--NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHV 220
+ + + D+ + +WD R N HS +++ E+ + ++P++E ILAS D+ + +
Sbjct: 241 SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAYTAEVNCLSFNPNSEFILASGSPDKTVAL 300
Query: 221 WDLSKI 226
WDL +
Sbjct: 301 WDLRNL 306
Score = 131 (51.2 bits), Expect = 8.7e-98, Sum P(2) = 8.7e-98
Identities = 25/31 (80%), Positives = 28/31 (90%)
Query: 46 FDDAVEERVINEEYKIWKKNTPFLYDLVVNN 76
F+D VEERVINEEYKIWK NTPFLYDLV+ +
Sbjct: 8 FEDVVEERVINEEYKIWK-NTPFLYDLVMTH 37
Score = 122 (48.0 bits), Expect = 8.4e-14, Sum P(2) = 8.4e-14
Identities = 33/140 (23%), Positives = 66/140 (47%)
Query: 116 ESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVA 175
E + S + D+ + +WD R N+ H+ ++H E+ + ++P++E ILA+ D+ +
Sbjct: 286 EFILASGSPDKTVALWDLR--NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLN 343
Query: 176 LWDLRNLKLK-------------LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWD 222
+WDL + + L H +I W+P+ ++ S D + VW
Sbjct: 344 VWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQ 403
Query: 223 LSK-IGEEQSTEDAEDGPPE 241
+++ I ++ E + D PE
Sbjct: 404 MAENIYNDEDPEGSVD--PE 421
Score = 117 (46.2 bits), Expect = 2.8e-13, Sum P(2) = 2.8e-13
Identities = 34/131 (25%), Positives = 58/131 (44%)
Query: 148 HTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKL--KLHS----FESHKDEIFQVQW 201
H E LS+NPY L + S D T+ LWD+ + K+ F H + V W
Sbjct: 176 HQKEGYGLSWNPYLSGYLLSASDDHTICLWDISAVPKEGKVVGAKTIFTGHTAVVEDVSW 235
Query: 202 SPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPN 261
+E++ S D++L +WD + + + +TA+++ S+NPN
Sbjct: 236 HLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVD-----------AYTAEVNCLSFNPN 284
Query: 262 EPWVICSVSED 272
+++ S S D
Sbjct: 285 SEFILASGSPD 295
Score = 110 (43.8 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 37/149 (24%), Positives = 66/149 (44%)
Query: 148 HTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLK----------LHSFESHKDEIF 197
+ EVN + P + I+AT + V ++D K LH H+ E +
Sbjct: 123 YEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNSDLH-LRGHQKEGY 181
Query: 198 QVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFS 257
+ W+P+ L S+ D + +WD+S + +E A+ I GHTA + D S
Sbjct: 182 GLSWNPYLSGYLLSASDDHTICLWDISAVPKEGKVVGAKT-------IFTGHTAVVEDVS 234
Query: 258 WNPNEPWVICSVSEDNIMQEYCDSTDSDT 286
W+ + SV++D + + D+ ++T
Sbjct: 235 WHLLHESLFGSVADDQKLMIW-DTRSNNT 262
Score = 80 (33.2 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 19/82 (23%), Positives = 38/82 (46%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWD-TRSHNVSKPSHTVDA----------HTAEVNCLSF 157
V W +E++ S D++L +WD ++ P D HTA+++ S+
Sbjct: 323 VQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSW 382
Query: 158 NPYSEYILATGSADKTVALWDL 179
NP +++ + S D + +W +
Sbjct: 383 NPNEPWVICSVSEDNIMQVWQM 404
Score = 63 (27.2 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 21/91 (23%), Positives = 41/91 (45%)
Query: 183 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPEL 242
K+++ +++ E+ + ++ P N I+A+ + V+D +K S D
Sbjct: 114 KIEIEIKINYEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTK---HPSKPDPSGECNSD 170
Query: 243 LFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
L + G H + SWNP + S S+D+
Sbjct: 171 LHLRG-HQKEGYGLSWNPYLSGYLLSASDDH 200
Score = 43 (20.2 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 10/41 (24%), Positives = 19/41 (46%)
Query: 108 DVAWHLLHESLFGSVADDQKLMIWDTRS--HNVSKPSHTVD 146
D +W+ + SV++D + +W +N P +VD
Sbjct: 379 DFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSVD 419
>UNIPROTKB|Q61Y48 [details] [associations]
symbol:lin-53 "Probable histone-binding protein lin-53"
species:6238 "Caenorhabditis briggsae" [GO:0005634 "nucleus"
evidence=ISS] [GO:0009790 "embryo development" evidence=ISS]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0040035 "hermaphrodite genitalia development"
evidence=ISS] [GO:0042826 "histone deacetylase binding"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0017053 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0040035 GO:GO:0042826
InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330 EMBL:HE600990
ProteinModelPortal:Q61Y48 SMR:Q61Y48 STRING:Q61Y48 PRIDE:Q61Y48
EnsemblMetazoa:CBG03710 WormBase:CBG03710 Uniprot:Q61Y48
Length = 416
Score = 805 (288.4 bits), Expect = 1.0e-90, Sum P(2) = 1.0e-90
Identities = 145/183 (79%), Positives = 167/183 (91%)
Query: 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166
+DVAWH+LH+ +FGSV DD+KL+IWD R+ NV P H +DAH+AEVNCL+FNPYSE+ILA
Sbjct: 226 EDVAWHVLHDGVFGSVGDDKKLLIWDLRT-NV--PGHAIDAHSAEVNCLAFNPYSEFILA 282
Query: 167 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
TGSADKTVALWDLRNL+LKLHSFESH+DEIFQVQWSPHNETILASSGTD+RLHVWDLSKI
Sbjct: 283 TGSADKTVALWDLRNLRLKLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWDLSKI 342
Query: 227 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ--EYCDSTDS 284
GE+Q+ EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWV+CSVSEDNI+Q + D+ +
Sbjct: 343 GEDQTAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVVCSVSEDNILQVWQMADNIYN 402
Query: 285 DTK 287
D +
Sbjct: 403 DVE 405
Score = 138 (53.6 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 38/174 (21%), Positives = 79/174 (45%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWDTR----SHNVSKPSHTVDAHTAEVNCLSFNPYSEYI 164
++W+ E L S +DDQ + WD ++ K H + V ++++ + +
Sbjct: 178 LSWNPNKEGLILSASDDQTVCHWDINGNAGANGELKAREIFKGHESVVEDVAWHVLHDGV 237
Query: 165 LATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLS 224
+ DK + +WDLR + H+ ++H E+ + ++P++E ILA+ D+ + +WDL
Sbjct: 238 FGSVGDDKKLLIWDLRT-NVPGHAIDAHSAEVNCLAFNPYSEFILATGSADKTVALWDLR 296
Query: 225 KIGEE-QSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQE 277
+ + S E D ++ + T S + W + + ED ++
Sbjct: 297 NLRLKLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWDLSKIGEDQTAED 350
Score = 127 (49.8 bits), Expect = 4.5e-13, Sum P(2) = 4.5e-13
Identities = 30/93 (32%), Positives = 47/93 (50%)
Query: 137 NVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR-----NLKLKLHS-FE 190
N P + HT E LS+NP E ++ + S D+TV WD+ N +LK F+
Sbjct: 160 NTFNPLLKLKGHTKEGYGLSWNPNKEGLILSASDDQTVCHWDINGNAGANGELKAREIFK 219
Query: 191 SHKDEIFQVQWSPHNETILASSGTDRRLHVWDL 223
H+ + V W ++ + S G D++L +WDL
Sbjct: 220 GHESVVEDVAWHVLHDGVFGSVGDDKKLLIWDL 252
Score = 119 (46.9 bits), Expect = 1.0e-90, Sum P(2) = 1.0e-90
Identities = 21/30 (70%), Positives = 25/30 (83%)
Query: 47 DDAVEERVINEEYKIWKKNTPFLYDLVVNN 76
D E+RV N+EYKIWKKNTPFLYDLV+ +
Sbjct: 6 DGTSEDRVANDEYKIWKKNTPFLYDLVMTH 35
Score = 98 (39.6 bits), Expect = 5.4e-10, Sum P(2) = 5.4e-10
Identities = 33/133 (24%), Positives = 57/133 (42%)
Query: 148 HTAEVNCLSFNPYSEYILATGSADKTVALWDLR--------NLKLKLHSFESHKDEIFQV 199
H EVN + P I+AT S V ++D N L + H E + +
Sbjct: 119 HEGEVNRARYMPQKPTIIATKSPSADVYIFDYTKYPSVPKDNTFNPLLKLKGHTKEGYGL 178
Query: 200 QWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWN 259
W+P+ E ++ S+ D+ + WD++ G + +G + I GH + + D +W+
Sbjct: 179 SWNPNKEGLILSASDDQTVCHWDIN--GNAGA-----NGELKAREIFKGHESVVEDVAWH 231
Query: 260 PNEPWVICSVSED 272
V SV +D
Sbjct: 232 VLHDGVFGSVGDD 244
Score = 95 (38.5 bits), Expect = 7.7e-10, Sum P(3) = 7.7e-10
Identities = 24/82 (29%), Positives = 43/82 (52%)
Query: 191 SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHT 250
+H+ E+ + ++ P TI+A+ ++++D +K +D P LL + G HT
Sbjct: 118 NHEGEVNRARYMPQKPTIIATKSPSADVYIFDYTKY--PSVPKDNTFNP--LLKLKG-HT 172
Query: 251 AKISDFSWNPNEPWVICSVSED 272
+ SWNPN+ +I S S+D
Sbjct: 173 KEGYGLSWNPNKEGLILSASDD 194
Score = 39 (18.8 bits), Expect = 7.7e-10, Sum P(3) = 7.7e-10
Identities = 10/33 (30%), Positives = 19/33 (57%)
Query: 389 HKSV-SDPSYHLISGQVARKFFENSKLPVTELR 420
H+SV D ++H++ V ++ KL + +LR
Sbjct: 221 HESVVEDVAWHVLHDGVFGSVGDDKKLLIWDLR 253
>UNIPROTKB|I3LKT8 [details] [associations]
symbol:RBBP4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042826 "histone deacetylase binding" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0033186 "CAF-1
complex" evidence=IEA] [GO:0031497 "chromatin assembly"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0016581
"NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 EMBL:FP312679
EMBL:FP325261 ProteinModelPortal:I3LKT8 PRIDE:I3LKT8
Ensembl:ENSSSCT00000023350 Uniprot:I3LKT8
Length = 390
Score = 884 (316.2 bits), Expect = 1.6e-88, P = 1.6e-88
Identities = 162/170 (95%), Positives = 168/170 (98%)
Query: 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166
+DV+WHLLHESLFGSVADDQKLMIWDTRS+N SKPSH+VDAHTAEVNCLSFNPYSE+ILA
Sbjct: 196 EDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILA 255
Query: 167 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRL+VWDLSKI
Sbjct: 256 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKI 315
Query: 227 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276
GEEQS EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ
Sbjct: 316 GEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 365
Score = 142 (55.0 bits), Expect = 8.7e-07, P = 8.7e-07
Identities = 34/114 (29%), Positives = 60/114 (52%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDA------HTAEVNCLSFNPYSEYILATGSADKTV 174
S +DD + +WD + V K VDA HTA V +S++ E + + + D+ +
Sbjct: 160 SASDDHTICLWDISA--VPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKL 217
Query: 175 ALWDLR--NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
+WD R N HS ++H E+ + ++P++E ILA+ D+ + +WDL +
Sbjct: 218 MIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL 271
Score = 118 (46.6 bits), Expect = 0.00041, P = 0.00041
Identities = 32/140 (22%), Positives = 66/140 (47%)
Query: 116 ESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVA 175
E + + + D+ + +WD R N+ H+ ++H E+ + ++P++E ILA+ D+ +
Sbjct: 251 EFILATGSADKTVALWDLR--NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLN 308
Query: 176 LWDLRNLKLK-------------LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWD 222
+WDL + + L H +I W+P+ ++ S D + VW
Sbjct: 309 VWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQ 368
Query: 223 LSK-IGEEQSTEDAEDGPPE 241
+++ I ++ E + D PE
Sbjct: 369 MAENIYNDEDPEGSVD--PE 386
>UNIPROTKB|K7GRD3 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GeneTree:ENSGT00570000079069 InterPro:IPR022052
Pfam:PF12265 EMBL:CU463287 Ensembl:ENSSSCT00000034836
Uniprot:K7GRD3
Length = 416
Score = 872 (312.0 bits), Expect = 2.9e-87, P = 2.9e-87
Identities = 160/170 (94%), Positives = 165/170 (97%)
Query: 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166
+DVAWHLLHESLFGSVADDQKLMIWDTRS+ SKPSH VDAHTAEVNCLSFNPYSE+ILA
Sbjct: 221 EDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILA 280
Query: 167 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
TGSADKTVALWDLRNLKLKLH+FESHKDEIFQV WSPHNETILASSGTDRRL+VWDLSKI
Sbjct: 281 TGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKI 340
Query: 227 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276
GEEQS EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ
Sbjct: 341 GEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 390
Score = 196 (74.1 bits), Expect = 8.5e-13, P = 8.5e-13
Identities = 73/264 (27%), Positives = 116/264 (43%)
Query: 44 EPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFP 103
E F+D VEERVINEEYKIWKKNTPFLYDLV+ + + S L + L E+ + +
Sbjct: 5 EMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPS--LTVQWLP-EVTKPEGKDYA 61
Query: 104 LSRQDVAWHLLHESLFGSVA------DDQKLMIWDTRSHNVSKPSHTVDA-HTAEVNCLS 156
L + H E VA DD + S K + H EVN
Sbjct: 62 LHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSEKGGKIECEIKINHEGEVNRAR 121
Query: 157 FNPYSEYILATGSADKTVALWDLRNLKLKLHS---------FESHKDEIFQVQWSPHNET 207
+ P + +I+AT + V ++D K H+ E + + W+ +
Sbjct: 122 YMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSG 181
Query: 208 ILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVIC 267
L S+ D + +WD++ +E DA+ I GH+A + D +W+ +
Sbjct: 182 HLLSASDDHTVCLWDINAGPKEGKIVDAKA-------IFTGHSAVVEDVAWHLLHESLFG 234
Query: 268 SVSEDNIMQEYCDSTDSDTKTMRL 291
SV++D + + +++ +K L
Sbjct: 235 SVADDQKLMIWDTRSNTTSKPSHL 258
Score = 116 (45.9 bits), Expect = 0.00075, P = 0.00075
Identities = 28/131 (21%), Positives = 64/131 (48%)
Query: 116 ESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVA 175
E + + + D+ + +WD R N+ HT ++H E+ + ++P++E ILA+ D+ +
Sbjct: 276 EFILATGSADKTVALWDLR--NLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLN 333
Query: 176 LWDLRNLKLKLHSFES-------------HKDEIFQVQWSPHNETILASSGTDRRLHVWD 222
+WDL + + + ++ H +I W+P+ ++ S D + +W
Sbjct: 334 VWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQ 393
Query: 223 LSK--IGEEQS 231
+++ +E+S
Sbjct: 394 MAENIYNDEES 404
>UNIPROTKB|E9PC52 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 EMBL:AL929302 HGNC:HGNC:9890
ChiTaRS:RBBP7 IPI:IPI00879702 ProteinModelPortal:E9PC52 SMR:E9PC52
PRIDE:E9PC52 Ensembl:ENST00000404022 ArrayExpress:E9PC52
Bgee:E9PC52 Uniprot:E9PC52
Length = 416
Score = 872 (312.0 bits), Expect = 2.9e-87, P = 2.9e-87
Identities = 160/170 (94%), Positives = 165/170 (97%)
Query: 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166
+DVAWHLLHESLFGSVADDQKLMIWDTRS+ SKPSH VDAHTAEVNCLSFNPYSE+ILA
Sbjct: 221 EDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILA 280
Query: 167 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
TGSADKTVALWDLRNLKLKLH+FESHKDEIFQV WSPHNETILASSGTDRRL+VWDLSKI
Sbjct: 281 TGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKI 340
Query: 227 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276
GEEQS EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ
Sbjct: 341 GEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 390
Score = 195 (73.7 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 73/264 (27%), Positives = 116/264 (43%)
Query: 44 EPFDDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFP 103
E F+D VEERVINEEYKIWKKNTPFLYDLV+ + + S L + L E+ + +
Sbjct: 5 EMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPS--LTVQWLP-EVTKPEGKDYA 61
Query: 104 LSRQDVAWHLLHESLFGSVA------DDQKLMIWDTRSHNVSKPSHTVDA-HTAEVNCLS 156
L + H E VA DD + S K + H EVN
Sbjct: 62 LHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGGKIECEIKINHEGEVNRAR 121
Query: 157 FNPYSEYILATGSADKTVALWDLRNLKLKLHS---------FESHKDEIFQVQWSPHNET 207
+ P + +I+AT + V ++D K H+ E + + W+ +
Sbjct: 122 YMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSG 181
Query: 208 ILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVIC 267
L S+ D + +WD++ +E DA+ I GH+A + D +W+ +
Sbjct: 182 HLLSASDDHTVCLWDINAGPKEGKIVDAKA-------IFTGHSAVVEDVAWHLLHESLFG 234
Query: 268 SVSEDNIMQEYCDSTDSDTKTMRL 291
SV++D + + +++ +K L
Sbjct: 235 SVADDQKLMIWDTRSNTTSKPSHL 258
Score = 116 (45.9 bits), Expect = 0.00075, P = 0.00075
Identities = 28/131 (21%), Positives = 64/131 (48%)
Query: 116 ESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVA 175
E + + + D+ + +WD R N+ HT ++H E+ + ++P++E ILA+ D+ +
Sbjct: 276 EFILATGSADKTVALWDLR--NLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLN 333
Query: 176 LWDLRNLKLKLHSFES-------------HKDEIFQVQWSPHNETILASSGTDRRLHVWD 222
+WDL + + + ++ H +I W+P+ ++ S D + +W
Sbjct: 334 VWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQ 393
Query: 223 LSK--IGEEQS 231
+++ +E+S
Sbjct: 394 MAENIYNDEES 404
>UNIPROTKB|H0YCT5 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016581 EMBL:AC114489 HGNC:HGNC:9887
ChiTaRS:RBBP4 PRIDE:H0YCT5 Ensembl:ENST00000460669 Bgee:H0YCT5
Uniprot:H0YCT5
Length = 180
Score = 807 (289.1 bits), Expect = 2.2e-80, P = 2.2e-80
Identities = 149/155 (96%), Positives = 153/155 (98%)
Query: 122 VADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRN 181
VADDQKLMIWDTRS+N SKPSH+VDAHTAEVNCLSFNPYSE+ILATGSADKTVALWDLRN
Sbjct: 1 VADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRN 60
Query: 182 LKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPE 241
LKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRL+VWDLSKIGEEQS EDAEDGPPE
Sbjct: 61 LKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPE 120
Query: 242 LLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276
LLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ
Sbjct: 121 LLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 155
Score = 118 (46.6 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 32/140 (22%), Positives = 66/140 (47%)
Query: 116 ESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVA 175
E + + + D+ + +WD R N+ H+ ++H E+ + ++P++E ILA+ D+ +
Sbjct: 41 EFILATGSADKTVALWDLR--NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLN 98
Query: 176 LWDLRNLKLK-------------LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWD 222
+WDL + + L H +I W+P+ ++ S D + VW
Sbjct: 99 VWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQ 158
Query: 223 LSK-IGEEQSTEDAEDGPPE 241
+++ I ++ E + D PE
Sbjct: 159 MAENIYNDEDPEGSVD--PE 176
>WB|WBGene00003036 [details] [associations]
symbol:lin-53 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040027
"negative regulation of vulval development" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0048557
"embryonic digestive tract morphogenesis" evidence=IGI] [GO:0005634
"nucleus" evidence=IDA] [GO:0045138 "tail tip morphogenesis"
evidence=IMP] [GO:0001708 "cell fate specification" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070176 "DRM
complex" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0001708 GO:GO:0009792 GO:GO:0006915
GO:GO:0045892 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0040035 GO:GO:0045138 GO:GO:0040027
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0048557 HOGENOM:HOG000160330 EMBL:AF116530
EMBL:Z81097 EMBL:AL023833 PIR:T23391 RefSeq:NP_492552.1
UniGene:Cel.19610 ProteinModelPortal:P90916 SMR:P90916
IntAct:P90916 MINT:MINT-114323 STRING:P90916 PaxDb:P90916
EnsemblMetazoa:K07A1.12.1 EnsemblMetazoa:K07A1.12.2 GeneID:172802
KEGG:cel:CELE_K07A1.12 UCSC:K07A1.12.1 CTD:172802 WormBase:K07A1.12
InParanoid:P90916 OMA:DGFLLHV NextBio:877063 GO:GO:0070176
Uniprot:P90916
Length = 417
Score = 805 (288.4 bits), Expect = 3.7e-80, P = 3.7e-80
Identities = 142/170 (83%), Positives = 160/170 (94%)
Query: 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166
+DVAWH+LH+ +FGSV DD+KL+IWD R+ S P H +DAH+AEVNCL+FNPYSE+ILA
Sbjct: 226 EDVAWHVLHDGVFGSVGDDKKLLIWDVRT---STPGHCIDAHSAEVNCLAFNPYSEFILA 282
Query: 167 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
TGSADKTVALWDLRNL++KLHSFESH+DEIFQVQWSPHNETILASSGTD+RLHVWDLSKI
Sbjct: 283 TGSADKTVALWDLRNLRMKLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWDLSKI 342
Query: 227 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276
GE+QS EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWV+CSVSEDNI+Q
Sbjct: 343 GEDQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVVCSVSEDNILQ 392
Score = 138 (53.6 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 39/174 (22%), Positives = 80/174 (45%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWDTRSH-NVSKPSHTVDA---HTAEVNCLSFNPYSEYI 164
++W+ E L S +DDQ + WD ++ NV+ D H + V ++++ + +
Sbjct: 178 LSWNPNKEGLILSASDDQTVCHWDINANQNVAGELQAKDVFKGHESVVEDVAWHVLHDGV 237
Query: 165 LATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLS 224
+ DK + +WD+R H ++H E+ + ++P++E ILA+ D+ + +WDL
Sbjct: 238 FGSVGDDKKLLIWDVRT-STPGHCIDAHSAEVNCLAFNPYSEFILATGSADKTVALWDLR 296
Query: 225 KIGEE-QSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQE 277
+ + S E D ++ + T S + W + + ED ++
Sbjct: 297 NLRMKLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWDLSKIGEDQSAED 350
Score = 127 (49.8 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 42/167 (25%), Positives = 78/167 (46%)
Query: 137 NVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDL---RNLKLKLHS---FE 190
N P + HT E LS+NP E ++ + S D+TV WD+ +N+ +L + F+
Sbjct: 160 NTFNPLIRLKGHTKEGYGLSWNPNKEGLILSASDDQTVCHWDINANQNVAGELQAKDVFK 219
Query: 191 SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHT 250
H+ + V W ++ + S G D++L +WD+ ST P + H+
Sbjct: 220 GHESVVEDVAWHVLHDGVFGSVGDDKKLLIWDV-----RTST------PGHCI---DAHS 265
Query: 251 AKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSN 297
A+++ ++NP +++ + S D + + D M+L S S+
Sbjct: 266 AEVNCLAFNPYSEFILATGSADKTVALW----DLRNLRMKLHSFESH 308
Score = 123 (48.4 bits), Expect = 0.00013, P = 0.00013
Identities = 46/149 (30%), Positives = 68/149 (45%)
Query: 47 DDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSR 106
D E+RV N+EYKIWKKNTPFLYDLV+ + + S +S+ + + N + R
Sbjct: 6 DGTSEDRVANDEYKIWKKNTPFLYDLVMTHALEWPS----LSVQWLPDVAKDNSDHTIHR 61
Query: 107 QDVAWHLLHES---LFGSVA---DDQKLMI--WDT-RS--------HNVSKPSHTVDAHT 149
+ H E L + DD + +DT RS + +P ++ H
Sbjct: 62 LILGTHTSDEQNHLLISKICMPTDDAQFDASRYDTERSEYGGFGAVNGKVEPDIRIN-HE 120
Query: 150 AEVNCLSFNPYSEYILATGSADKTVALWD 178
EVN + P I+AT S V ++D
Sbjct: 121 GEVNRARYMPQKSNIIATKSPHADVYIFD 149
Score = 120 (47.3 bits), Expect = 0.00027, P = 0.00027
Identities = 35/145 (24%), Positives = 66/145 (45%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATG 168
+A++ E + + + D+ + +WD R N+ H+ ++H E+ + ++P++E ILA+
Sbjct: 271 LAFNPYSEFILATGSADKTVALWDLR--NLRMKLHSFESHRDEIFQVQWSPHNETILASS 328
Query: 169 SADKTVALWDLRNLK---------------LKLHSFESHKDEIFQVQWSPHNETILASSG 213
DK + +WDL + L +H H +I W+P+ ++ S
Sbjct: 329 GTDKRLHVWDLSKIGEDQSAEDAEDGPPELLFIHG--GHTAKISDFSWNPNEPWVVCSVS 386
Query: 214 TDRRLHVWDLS-KIGEEQSTEDAED 237
D L VW ++ I E E D
Sbjct: 387 EDNILQVWQMADNIYNEVDEETPAD 411
>UNIPROTKB|P90916 [details] [associations]
symbol:lin-53 "Probable histone-binding protein lin-53"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0042826 "histone deacetylase binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0009790
"embryo development" evidence=IMP] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0070176
"DRM complex" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=NAS] [GO:0017053
"transcriptional repressor complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0001708 GO:GO:0009792 GO:GO:0006915 GO:GO:0045892
GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0040035 GO:GO:0045138
GO:GO:0040027 GeneTree:ENSGT00570000079069 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0048557 HOGENOM:HOG000160330
EMBL:AF116530 EMBL:Z81097 EMBL:AL023833 PIR:T23391
RefSeq:NP_492552.1 UniGene:Cel.19610 ProteinModelPortal:P90916
SMR:P90916 IntAct:P90916 MINT:MINT-114323 STRING:P90916
PaxDb:P90916 EnsemblMetazoa:K07A1.12.1 EnsemblMetazoa:K07A1.12.2
GeneID:172802 KEGG:cel:CELE_K07A1.12 UCSC:K07A1.12.1 CTD:172802
WormBase:K07A1.12 InParanoid:P90916 OMA:DGFLLHV NextBio:877063
GO:GO:0070176 Uniprot:P90916
Length = 417
Score = 805 (288.4 bits), Expect = 3.7e-80, P = 3.7e-80
Identities = 142/170 (83%), Positives = 160/170 (94%)
Query: 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166
+DVAWH+LH+ +FGSV DD+KL+IWD R+ S P H +DAH+AEVNCL+FNPYSE+ILA
Sbjct: 226 EDVAWHVLHDGVFGSVGDDKKLLIWDVRT---STPGHCIDAHSAEVNCLAFNPYSEFILA 282
Query: 167 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
TGSADKTVALWDLRNL++KLHSFESH+DEIFQVQWSPHNETILASSGTD+RLHVWDLSKI
Sbjct: 283 TGSADKTVALWDLRNLRMKLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWDLSKI 342
Query: 227 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276
GE+QS EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWV+CSVSEDNI+Q
Sbjct: 343 GEDQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVVCSVSEDNILQ 392
Score = 138 (53.6 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 39/174 (22%), Positives = 80/174 (45%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWDTRSH-NVSKPSHTVDA---HTAEVNCLSFNPYSEYI 164
++W+ E L S +DDQ + WD ++ NV+ D H + V ++++ + +
Sbjct: 178 LSWNPNKEGLILSASDDQTVCHWDINANQNVAGELQAKDVFKGHESVVEDVAWHVLHDGV 237
Query: 165 LATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLS 224
+ DK + +WD+R H ++H E+ + ++P++E ILA+ D+ + +WDL
Sbjct: 238 FGSVGDDKKLLIWDVRT-STPGHCIDAHSAEVNCLAFNPYSEFILATGSADKTVALWDLR 296
Query: 225 KIGEE-QSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQE 277
+ + S E D ++ + T S + W + + ED ++
Sbjct: 297 NLRMKLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWDLSKIGEDQSAED 350
Score = 127 (49.8 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 42/167 (25%), Positives = 78/167 (46%)
Query: 137 NVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDL---RNLKLKLHS---FE 190
N P + HT E LS+NP E ++ + S D+TV WD+ +N+ +L + F+
Sbjct: 160 NTFNPLIRLKGHTKEGYGLSWNPNKEGLILSASDDQTVCHWDINANQNVAGELQAKDVFK 219
Query: 191 SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHT 250
H+ + V W ++ + S G D++L +WD+ ST P + H+
Sbjct: 220 GHESVVEDVAWHVLHDGVFGSVGDDKKLLIWDV-----RTST------PGHCI---DAHS 265
Query: 251 AKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSN 297
A+++ ++NP +++ + S D + + D M+L S S+
Sbjct: 266 AEVNCLAFNPYSEFILATGSADKTVALW----DLRNLRMKLHSFESH 308
Score = 123 (48.4 bits), Expect = 0.00013, P = 0.00013
Identities = 46/149 (30%), Positives = 68/149 (45%)
Query: 47 DDAVEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQNFPFPLSR 106
D E+RV N+EYKIWKKNTPFLYDLV+ + + S +S+ + + N + R
Sbjct: 6 DGTSEDRVANDEYKIWKKNTPFLYDLVMTHALEWPS----LSVQWLPDVAKDNSDHTIHR 61
Query: 107 QDVAWHLLHES---LFGSVA---DDQKLMI--WDT-RS--------HNVSKPSHTVDAHT 149
+ H E L + DD + +DT RS + +P ++ H
Sbjct: 62 LILGTHTSDEQNHLLISKICMPTDDAQFDASRYDTERSEYGGFGAVNGKVEPDIRIN-HE 120
Query: 150 AEVNCLSFNPYSEYILATGSADKTVALWD 178
EVN + P I+AT S V ++D
Sbjct: 121 GEVNRARYMPQKSNIIATKSPHADVYIFD 149
Score = 120 (47.3 bits), Expect = 0.00027, P = 0.00027
Identities = 35/145 (24%), Positives = 66/145 (45%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATG 168
+A++ E + + + D+ + +WD R N+ H+ ++H E+ + ++P++E ILA+
Sbjct: 271 LAFNPYSEFILATGSADKTVALWDLR--NLRMKLHSFESHRDEIFQVQWSPHNETILASS 328
Query: 169 SADKTVALWDLRNLK---------------LKLHSFESHKDEIFQVQWSPHNETILASSG 213
DK + +WDL + L +H H +I W+P+ ++ S
Sbjct: 329 GTDKRLHVWDLSKIGEDQSAEDAEDGPPELLFIHG--GHTAKISDFSWNPNEPWVVCSVS 386
Query: 214 TDRRLHVWDLS-KIGEEQSTEDAED 237
D L VW ++ I E E D
Sbjct: 387 EDNILQVWQMADNIYNEVDEETPAD 411
>UNIPROTKB|B4DRT0 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016581 EMBL:AC114489 UniGene:Hs.16003
HGNC:HGNC:9887 ChiTaRS:RBBP4 EMBL:AK299410 IPI:IPI00983362
SMR:B4DRT0 STRING:B4DRT0 Ensembl:ENST00000544435 UCSC:uc010ohj.2
HOVERGEN:HBG103193 Uniprot:B4DRT0
Length = 173
Score = 773 (277.2 bits), Expect = 9.0e-77, P = 9.0e-77
Identities = 142/148 (95%), Positives = 146/148 (98%)
Query: 129 MIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHS 188
MIWDTRS+N SKPSH+VDAHTAEVNCLSFNPYSE+ILATGSADKTVALWDLRNLKLKLHS
Sbjct: 1 MIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHS 60
Query: 189 FESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGG 248
FESHKDEIFQVQWSPHNETILASSGTDRRL+VWDLSKIGEEQS EDAEDGPPELLFIHGG
Sbjct: 61 FESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGG 120
Query: 249 HTAKISDFSWNPNEPWVICSVSEDNIMQ 276
HTAKISDFSWNPNEPWVICSVSEDNIMQ
Sbjct: 121 HTAKISDFSWNPNEPWVICSVSEDNIMQ 148
Score = 118 (46.6 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 32/140 (22%), Positives = 66/140 (47%)
Query: 116 ESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVA 175
E + + + D+ + +WD R N+ H+ ++H E+ + ++P++E ILA+ D+ +
Sbjct: 34 EFILATGSADKTVALWDLR--NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLN 91
Query: 176 LWDLRNLKLK-------------LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWD 222
+WDL + + L H +I W+P+ ++ S D + VW
Sbjct: 92 VWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQ 151
Query: 223 LSK-IGEEQSTEDAEDGPPE 241
+++ I ++ E + D PE
Sbjct: 152 MAENIYNDEDPEGSVD--PE 169
>TAIR|locus:2161253 [details] [associations]
symbol:MSI1 "MULTICOPY SUPRESSOR OF IRA1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0007275 "multicellular organismal development" evidence=IMP]
[GO:0016568 "chromatin modification" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0043234 "protein complex"
evidence=IPI] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009793
"embryo development ending in seed dormancy" evidence=IMP]
[GO:0031507 "heterochromatin assembly" evidence=RCA;IMP]
[GO:0009909 "regulation of flower development" evidence=RCA;IMP]
[GO:0008283 "cell proliferation" evidence=IMP] [GO:0010026
"trichome differentiation" evidence=IMP] [GO:0048366 "leaf
development" evidence=IMP] [GO:0010214 "seed coat development"
evidence=IMP] [GO:0048316 "seed development" evidence=IMP]
[GO:0009555 "pollen development" evidence=IGI;IMP] [GO:0045787
"positive regulation of cell cycle" evidence=IGI;RCA] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=ISS] [GO:0006349
"regulation of gene expression by genetic imprinting" evidence=IPI]
[GO:0006275 "regulation of DNA replication" evidence=RCA]
[GO:0009965 "leaf morphogenesis" evidence=RCA] [GO:0010389
"regulation of G2/M transition of mitotic cell cycle" evidence=RCA]
[GO:0016570 "histone modification" evidence=RCA] [GO:0048449
"floral organ formation" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009507 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0009555 GO:GO:0010214 GO:GO:0008283
GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 EMBL:AB019228 GO:GO:0009793 GO:GO:0009908
GO:GO:0048366 GO:GO:0009909 GO:GO:0006349 GO:GO:0016585
GO:GO:0045787 GO:GO:0031507 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0080008 GO:GO:0010026 HOGENOM:HOG000160330
OMA:DGFLLHV EMBL:AF016846 EMBL:AY059874 EMBL:AY114646
IPI:IPI00535841 RefSeq:NP_200631.1 UniGene:At.49185
UniGene:At.66738 ProteinModelPortal:O22467 SMR:O22467
DIP:DIP-33481N IntAct:O22467 STRING:O22467 PaxDb:O22467
PRIDE:O22467 EnsemblPlants:AT5G58230.1 GeneID:835935
KEGG:ath:AT5G58230 GeneFarm:2813 TAIR:At5g58230 InParanoid:O22467
PhylomeDB:O22467 ProtClustDB:CLSN2683757 Genevestigator:O22467
GermOnline:AT5G58230 Uniprot:O22467
Length = 424
Score = 651 (234.2 bits), Expect = 1.6e-75, Sum P(2) = 1.6e-75
Identities = 119/170 (70%), Positives = 141/170 (82%)
Query: 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166
+DVAWHL HE LFGSV DDQ L+IWD RS + SKP +V AH+ EVNCL+FNP++E+++A
Sbjct: 231 EDVAWHLRHEYLFGSVGDDQYLLIWDLRSPSASKPVQSVVAHSMEVNCLAFNPFNEWVVA 290
Query: 167 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
TGS DKTV L+DLR L LH+F+SHK+E+FQV W+P NETILAS RRL VWDLS+I
Sbjct: 291 TGSTDKTVKLFDLRKLSTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRI 350
Query: 227 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276
EEQ+ EDAEDGPPELLFIHGGHT+KISDFSWNP E WVI SV+EDNI+Q
Sbjct: 351 DEEQTVEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQ 400
Score = 135 (52.6 bits), Expect = 5.6e-15, Sum P(2) = 5.6e-15
Identities = 37/165 (22%), Positives = 76/165 (46%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWDTRS--HNVSKPSHTV-DAHTAEVNCLSFNPYSEYIL 165
++W + S +DD ++ +WD + N S + + AH V ++++ EY+
Sbjct: 184 LSWSKFKQGHLLSGSDDAQICLWDINATPKNKSLDAQQIFKAHEGVVEDVAWHLRHEYLF 243
Query: 166 ATGSADKTVALWDLRNLKLK--LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDL 223
+ D+ + +WDLR+ + S +H E+ + ++P NE ++A+ TD+ + ++DL
Sbjct: 244 GSVGDDQYLLIWDLRSPSASKPVQSVVAHSMEVNCLAFNPFNEWVVATGSTDKTVKLFDL 303
Query: 224 SKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICS 268
K+ T D+ H ++ WNP ++ S
Sbjct: 304 RKLSTALHTFDS-------------HKEEVFQVGWNPKNETILAS 335
Score = 129 (50.5 bits), Expect = 1.6e-75, Sum P(2) = 1.6e-75
Identities = 22/27 (81%), Positives = 26/27 (96%)
Query: 50 VEERVINEEYKIWKKNTPFLYDLVVNN 76
+EER+INEEYKIWKKNTPFLYDLV+ +
Sbjct: 12 IEERLINEEYKIWKKNTPFLYDLVITH 38
Score = 124 (48.7 bits), Expect = 8.8e-14, Sum P(2) = 8.8e-14
Identities = 37/158 (23%), Positives = 69/158 (43%)
Query: 141 PSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDL----RNLKLKLHS-FESHKDE 195
P + H++E LS++ + + L +GS D + LWD+ +N L F++H+
Sbjct: 170 PDLKLRGHSSEGYGLSWSKFKQGHLLSGSDDAQICLWDINATPKNKSLDAQQIFKAHEGV 229
Query: 196 IFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISD 255
+ V W +E + S G D+ L +WDL + + H+ +++
Sbjct: 230 VEDVAWHLRHEYLFGSVGDDQYLLIWDLRSPSASKPVQSVV-----------AHSMEVNC 278
Query: 256 FSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDS 293
++NP WV+ + S D ++ + D T DS
Sbjct: 279 LAFNPFNEWVVATGSTDKTVKLF-DLRKLSTALHTFDS 315
Score = 117 (46.2 bits), Expect = 4.7e-13, Sum P(2) = 4.7e-13
Identities = 35/146 (23%), Positives = 67/146 (45%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATG 168
+A++ +E + + + D+ + ++D R +S HT D+H EV + +NP +E ILA+
Sbjct: 279 LAFNPFNEWVVATGSTDKTVKLFDLRK--LSTALHTFDSHKEEVFQVGWNPKNETILASC 336
Query: 169 SADKTVALWDLRNLKLK-------------LHSFESHKDEIFQVQWSPHNETILASSGTD 215
+ + +WDL + + L H +I W+P + +++S D
Sbjct: 337 CLGRRLMVWDLSRIDEEQTVEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAED 396
Query: 216 RRLHVWDLSKIGEEQSTEDAEDGPPE 241
L +W ++ E D +D P E
Sbjct: 397 NILQIWQMA----ENIYHDEDDAPGE 418
Score = 95 (38.5 bits), Expect = 8.8e-11, Sum P(2) = 8.8e-11
Identities = 33/140 (23%), Positives = 59/140 (42%)
Query: 148 HTAEVNCLSFNPYSEYILATGSADKTVALWDLR------------NLKLKLHSFESHKDE 195
H EVN + P + +I+AT + + V ++D N LKL H E
Sbjct: 124 HDGEVNRARYMPQNPFIIATKTVNAEVYVFDYSKHPSKPPLDGACNPDLKLRG---HSSE 180
Query: 196 IFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISD 255
+ + WS + L S D ++ +WD++ + +S DA+ I H + D
Sbjct: 181 GYGLSWSKFKQGHLLSGSDDAQICLWDINATPKNKSL-DAQQ-------IFKAHEGVVED 232
Query: 256 FSWNPNEPWVICSVSEDNIM 275
+W+ ++ SV +D +
Sbjct: 233 VAWHLRHEYLFGSVGDDQYL 252
Score = 69 (29.3 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 20/82 (24%), Positives = 42/82 (51%)
Query: 191 SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHT 250
+H E+ + ++ P N I+A+ + ++V+D SK + + A + P+L GH+
Sbjct: 123 NHDGEVNRARYMPQNPFIIATKTVNAEVYVFDYSKHPSKPPLDGACN--PDLKL--RGHS 178
Query: 251 AKISDFSWNPNEPWVICSVSED 272
++ SW+ + + S S+D
Sbjct: 179 SEGYGLSWSKFKQGHLLSGSDD 200
Score = 50 (22.7 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 108 DVAWHLLHESLFGSVADDQKLMIW 131
D +W+ + + SVA+D L IW
Sbjct: 379 DFSWNPCEDWVISSVAEDNILQIW 402
Score = 38 (18.4 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 379 YKTQFHNLQRHKSVSDPSYHLISGQV 404
Y Q L H S S+P+Y L+ QV
Sbjct: 61 YSVQKMILGTHTSESEPNY-LMLAQV 85
>DICTYBASE|DDB_G0282529 [details] [associations]
symbol:rbbD "putative Retinoblastoma (Rb) binding
protein" species:44689 "Dictyostelium discoideum" [GO:0016568
"chromatin modification" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0282529 GO:GO:0005634
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AAFI02000047 GenomeReviews:CM000152_GR
GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 KO:K10752 OMA:CQPDLRL
InterPro:IPR022052 Pfam:PF12265 RefSeq:XP_640105.1
ProteinModelPortal:Q54SD4 SMR:Q54SD4 STRING:Q54SD4 PRIDE:Q54SD4
EnsemblProtists:DDB0232003 GeneID:8623636 KEGG:ddi:DDB_G0282529
ProtClustDB:CLSZ2430461 Uniprot:Q54SD4
Length = 423
Score = 698 (250.8 bits), Expect = 8.0e-69, P = 8.0e-69
Identities = 122/170 (71%), Positives = 149/170 (87%)
Query: 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166
+DVAWH +H++ FGSV DD+KLMIWDTR+ +KP H V+AH +EVNCLSFNP+ E+++A
Sbjct: 228 EDVAWHYIHDTFFGSVGDDKKLMIWDTRTG--TKPIHVVEAHNSEVNCLSFNPFCEFLVA 285
Query: 167 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
TGS DKTVALWD+RNL +LHS SH DE+FQVQ+SPHNET+LAS G+DRR++VWDLS+I
Sbjct: 286 TGSTDKTVALWDMRNLGNRLHSLISHTDEVFQVQFSPHNETVLASCGSDRRVNVWDLSRI 345
Query: 227 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276
GEEQ+ EDA DGPPELLFIHGGHT+KISDFSWNPN+PW I SV+EDNI+Q
Sbjct: 346 GEEQNNEDAADGPPELLFIHGGHTSKISDFSWNPNDPWSIASVAEDNILQ 395
Score = 151 (58.2 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 42/179 (23%), Positives = 80/179 (44%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDA------HTAEVNCLSFNPYSE 162
++W+ E S +DDQ + +WD + SK T+DA HT+ V ++++ +
Sbjct: 180 ISWNPRKEGHLLSCSDDQSICMWDISA--ASKSDSTLDALNIYNGHTSIVEDVAWHYIHD 237
Query: 163 YILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWD 222
+ DK + +WD R +H E+H E+ + ++P E ++A+ TD+ + +WD
Sbjct: 238 TFFGSVGDDKKLMIWDTRTGTKPIHVVEAHNSEVNCLSFNPFCEFLVATGSTDKTVALWD 297
Query: 223 LSKIGEE-QSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCD 280
+ +G S D ++ F T S S W + + E+ ++ D
Sbjct: 298 MRNLGNRLHSLISHTDEVFQVQFSPHNETVLASCGSDRRVNVWDLSRIGEEQNNEDAAD 356
Score = 148 (57.2 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 68/267 (25%), Positives = 114/267 (42%)
Query: 50 VEERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNISILFFEIIFTQ-NFPFPLSRQD 108
VEE+VINEEYKIWK++TPFLYD+V+ + + S +++ + + +Q N P+ + +
Sbjct: 8 VEEKVINEEYKIWKRHTPFLYDMVITHALEWPS----LTVAWLPVKTSQPNKPYSIEKVI 63
Query: 109 VAWHLLHES----LFGSV------ADDQKLMIWDTRSH-----NVSKPSHTVDA--HTAE 151
+ H E + V A + L DT+ NVS+ + H E
Sbjct: 64 LGTHTSDEEQNYLMVAKVHLPVDEASIESLKYDDTKGEVGGIGNVSEKIEIIQKINHEGE 123
Query: 152 VNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQ--VQWSPHNETIL 209
VN P + I+AT + V ++D H E D ++ + H +
Sbjct: 124 VNRARVMPQNHSIIATKTVSSEVYIFDTTK-----HPLEPTPDGKCSPNLKLTGHKKEGY 178
Query: 210 ASSGTDRRL-HVW----DLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 264
S R+ H+ D S + S D + L I+ GHT+ + D +W+
Sbjct: 179 GISWNPRKEGHLLSCSDDQSICMWDISAASKSDSTLDALNIYNGHTSIVEDVAWHYIHDT 238
Query: 265 VICSVSEDNIMQEYCDSTDSDTKTMRL 291
SV +D + + T + TK + +
Sbjct: 239 FFGSVGDDKKLMIW--DTRTGTKPIHV 263
Score = 132 (51.5 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 33/135 (24%), Positives = 68/135 (50%)
Query: 116 ESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVA 175
E L + + D+ + +WD R N+ H++ +HT EV + F+P++E +LA+ +D+ V
Sbjct: 281 EFLVATGSTDKTVALWDMR--NLGNRLHSLISHTDEVFQVQFSPHNETVLASCGSDRRVN 338
Query: 176 LWDLRNLKLKLHSFES-------------HKDEIFQVQWSPHNETILASSGTDRRLHVWD 222
+WDL + + ++ ++ H +I W+P++ +AS D L +W
Sbjct: 339 VWDLSRIGEEQNNEDAADGPPELLFIHGGHTSKISDFSWNPNDPWSIASVAEDNILQIWQ 398
Query: 223 LSKIGEEQSTEDAED 237
+++ +D E+
Sbjct: 399 MAENIYNDREDDLEN 413
>TAIR|locus:2059856 [details] [associations]
symbol:MSI2 "AT2G16780" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0000911
"cytokinesis by cell plate formation" evidence=RCA] [GO:0006260
"DNA replication" evidence=RCA] [GO:0006306 "DNA methylation"
evidence=RCA] [GO:0007067 "mitosis" evidence=RCA] [GO:0007129
"synapsis" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0008283 "cell proliferation"
evidence=RCA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] [GO:0010564 "regulation of cell cycle process"
evidence=RCA] [GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 EMBL:AC005825 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000160330
ProtClustDB:CLSN2683757 EMBL:AF016847 EMBL:AY056814 IPI:IPI00526379
PIR:B84544 RefSeq:NP_179269.1 UniGene:At.25135
ProteinModelPortal:O22468 SMR:O22468 STRING:O22468 PaxDb:O22468
PRIDE:O22468 EnsemblPlants:AT2G16780.1 GeneID:816179
KEGG:ath:AT2G16780 GeneFarm:2815 TAIR:At2g16780 InParanoid:O22468
OMA:EVNYLSF PhylomeDB:O22468 Genevestigator:O22468
GermOnline:AT2G16780 Uniprot:O22468
Length = 415
Score = 576 (207.8 bits), Expect = 2.6e-63, Sum P(2) = 2.6e-63
Identities = 106/171 (61%), Positives = 134/171 (78%)
Query: 108 DVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILAT 167
DV+WH+ +E+LFGS +D +L+IWDTR++ + H V H EVN LSFNP++E++LAT
Sbjct: 222 DVSWHMKNENLFGSAGEDGRLVIWDTRTNQMQ---HQVKVHEREVNYLSFNPFNEWVLAT 278
Query: 168 GSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIG 227
S+D TVAL+DLR L LH SH+ E+FQV+W P++ET+LASSG DRRL VWDL+++G
Sbjct: 279 ASSDSTVALFDLRKLNAPLHVMSSHEGEVFQVEWDPNHETVLASSGEDRRLMVWDLNRVG 338
Query: 228 EEQ-STE-DAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276
EEQ E DAEDGPPELLF HGGH AKISDF+WN NEPWVI SV+EDN +Q
Sbjct: 339 EEQLEIELDAEDGPPELLFSHGGHKAKISDFAWNKNEPWVIASVAEDNSLQ 389
Score = 159 (61.0 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 39/167 (23%), Positives = 78/167 (46%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWD---TRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYIL 165
++W E S + DQK+ +WD T V + H + + +S++ +E +
Sbjct: 174 LSWSPFKEGYLLSGSQDQKICLWDVSATPQDKVLNAMFVYEGHESAIADVSWHMKNENLF 233
Query: 166 ATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 225
+ D + +WD R +++ H + H+ E+ + ++P NE +LA++ +D + ++DL K
Sbjct: 234 GSAGEDGRLVIWDTRTNQMQ-HQVKVHEREVNYLSFNPFNEWVLATASSDSTVALFDLRK 292
Query: 226 IGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED 272
+ + P L + H ++ W+PN V+ S ED
Sbjct: 293 L----------NAP---LHVMSSHEGEVFQVEWDPNHETVLASSGED 326
Score = 141 (54.7 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 42/168 (25%), Positives = 74/168 (44%)
Query: 117 SLFGSVADDQKLMIWDTRSHNVSKPSHTVD------AHTAEVNCLSFNPYSEYILATGSA 170
+L G+ ++ ++D H + D H E LS++P+ E L +GS
Sbjct: 130 TLVGAKTSGCEVFLFDYAKHAAKSQTSECDPDLRLVGHDKEGYGLSWSPFKEGYLLSGSQ 189
Query: 171 DKTVALWDL----RNLKLK-LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 225
D+ + LWD+ ++ L + +E H+ I V W NE + S+G D RL +WD ++
Sbjct: 190 DQKICLWDVSATPQDKVLNAMFVYEGHESAIADVSWHMKNENLFGSAGEDGRLVIWD-TR 248
Query: 226 IGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
+ Q H +++ S+NP WV+ + S D+
Sbjct: 249 TNQMQHQVKV-------------HEREVNYLSFNPFNEWVLATASSDS 283
Score = 131 (51.2 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 36/144 (25%), Positives = 69/144 (47%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATG 168
++++ +E + + + D + ++D R N P H + +H EV + ++P E +LA+
Sbjct: 266 LSFNPFNEWVLATASSDSTVALFDLRKLNA--PLHVMSSHEGEVFQVEWDPNHETVLASS 323
Query: 169 SADKTVALWDLRN-----LKLKLH----------SFESHKDEIFQVQWSPHNETILASSG 213
D+ + +WDL L+++L S HK +I W+ + ++AS
Sbjct: 324 GEDRRLMVWDLNRVGEEQLEIELDAEDGPPELLFSHGGHKAKISDFAWNKNEPWVIASVA 383
Query: 214 TDRRLHVWDLSKIGEEQSTEDAED 237
D L VW +++ + EDAED
Sbjct: 384 EDNSLQVWQMAE-SIYRDEEDAED 406
Score = 88 (36.0 bits), Expect = 2.6e-63, Sum P(2) = 2.6e-63
Identities = 12/22 (54%), Positives = 20/22 (90%)
Query: 55 INEEYKIWKKNTPFLYDLVVNN 76
+ E++ +WKKNTPFLYDL++++
Sbjct: 14 VEEDFSVWKKNTPFLYDLLISH 35
>ASPGD|ASPL0000017699 [details] [associations]
symbol:AN8187 species:162425 "Emericella nidulans"
[GO:0000778 "condensed nuclear chromosome kinetochore"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0000070 "mitotic sister chromatid segregation"
evidence=IEA] [GO:0006995 "cellular response to nitrogen
starvation" evidence=IEA] [GO:0034501 "protein localization to
kinetochore" evidence=IEA] [GO:0031055 "chromatin remodeling at
centromere" evidence=IEA] [GO:0070317 "negative regulation of G0 to
G1 transition" evidence=IEA] [GO:0016575 "histone deacetylation"
evidence=IEA] [GO:0031066 "regulation of histone deacetylation at
centromere" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001302 OMA:CQPDLRL InterPro:IPR022052
Pfam:PF12265 EnsemblFungi:CADANIAT00004230 Uniprot:C8V748
Length = 411
Score = 540 (195.1 bits), Expect = 2.9e-62, Sum P(2) = 2.9e-62
Identities = 95/170 (55%), Positives = 125/170 (73%)
Query: 108 DVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDA-HTAEVNCLSFNPYSEYILA 166
DV H LH SL G+V+DD L I DTR ++ + T + H +N ++FNP +E +LA
Sbjct: 219 DVQHHPLHSSLIGTVSDDITLQILDTRVAETTRAAATAEGQHRDAINAIAFNPAAETVLA 278
Query: 167 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
TGSADKT+ LWDLRNLK KLH+ E+H D + + W P E +LAS+ DR++ WDLS+
Sbjct: 279 TGSADKTIGLWDLRNLKTKLHTLENHTDSVTSISWHPFEEAVLASASYDRKIMFWDLSRA 338
Query: 227 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276
GEEQ+ EDA+DGPPELLF+HGGHT +ISDFSWN N+PWV+CS +EDN++Q
Sbjct: 339 GEEQTPEDAQDGPPELLFMHGGHTNRISDFSWNLNDPWVLCSAAEDNLLQ 388
Score = 146 (56.5 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 39/148 (26%), Positives = 70/148 (47%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATG 168
+A++ E++ + + D+ + +WD R N+ HT++ HT V +S++P+ E +LA+
Sbjct: 267 IAFNPAAETVLATGSADKTIGLWDLR--NLKTKLHTLENHTDSVTSISWHPFEEAVLASA 324
Query: 169 SADKTVALWDLRNLKLK-------------LHSFESHKDEIFQVQWSPHNETILASSGTD 215
S D+ + WDL + L H + I W+ ++ +L S+ D
Sbjct: 325 SYDRKIMFWDLSRAGEEQTPEDAQDGPPELLFMHGGHTNRISDFSWNLNDPWVLCSAAED 384
Query: 216 RRLHVWDLSKIGEEQSTEDAEDGPPELL 243
L VW K+ + +D ED P E L
Sbjct: 385 NLLQVW---KVADAIVGKDMEDVPTEEL 409
Score = 114 (45.2 bits), Expect = 2.9e-62, Sum P(2) = 2.9e-62
Identities = 18/32 (56%), Positives = 26/32 (81%)
Query: 44 EPFDDAVEERVINEEYKIWKKNTPFLYDLVVN 75
E ++ EE++INEEYK WKKN PFLYD++++
Sbjct: 14 EQEEERTEEKIINEEYKTWKKNAPFLYDMILS 45
Score = 89 (36.4 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 44/173 (25%), Positives = 79/173 (45%)
Query: 127 KLMIWDTRSHNVSKPSHTVD------AHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
++MIWD RS + S P+ TV+ H E LS++P+ LATG D T + +
Sbjct: 145 RVMIWD-RSKHQSVPTGTVNPQMELLGHKQEGFGLSWSPHVAGHLATGR-DLTTYTKNNK 202
Query: 181 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPP 240
L+ + ++ H + VQ P + +++ + D L + D +++ E +T A
Sbjct: 203 ALQ-PVRTYTHHSSIVNDVQHHPLHSSLIGTVSDDITLQILD-TRVAE--TTRAAATA-- 256
Query: 241 ELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDS 293
G H I+ ++NP V+ + S D + + D + TK L++
Sbjct: 257 -----EGQHRDAINAIAFNPAAETVLATGSADKTIGLW-DLRNLKTKLHTLEN 303
Score = 49 (22.3 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 12/44 (27%), Positives = 17/44 (38%)
Query: 108 DVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAE 151
D +W+L + S A+D L +W V K V E
Sbjct: 367 DFSWNLNDPWVLCSAAEDNLLQVWKVADAIVGKDMEDVPTEELE 410
>TAIR|locus:2131551 [details] [associations]
symbol:MSI3 "MULTICOPY SUPPRESSOR OF IRA1 3" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0005515 "protein binding" evidence=IPI] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=IPI] [GO:0000278 "mitotic cell
cycle" evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0006406 "mRNA export from nucleus" evidence=RCA] [GO:0006606
"protein import into nucleus" evidence=RCA] [GO:0009560 "embryo sac
egg cell differentiation" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010074 "maintenance of meristem
identity" evidence=RCA] [GO:0010162 "seed dormancy process"
evidence=RCA] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0016567 "protein
ubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0050826 "response to freezing" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 EMBL:AL022023 EMBL:AL161586 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000160330
OMA:VLYDLVI ProtClustDB:CLSN2683757 EMBL:AF016848 IPI:IPI00525720
PIR:T05775 RefSeq:NP_195231.1 UniGene:At.2099
ProteinModelPortal:O22469 SMR:O22469 IntAct:O22469 STRING:O22469
PaxDb:O22469 PRIDE:O22469 EnsemblPlants:AT4G35050.1 GeneID:829657
KEGG:ath:AT4G35050 GeneFarm:2817 TAIR:At4g35050 InParanoid:O22469
PhylomeDB:O22469 Genevestigator:O22469 GermOnline:AT4G35050
Uniprot:O22469
Length = 424
Score = 558 (201.5 bits), Expect = 9.9e-62, Sum P(2) = 9.9e-62
Identities = 101/172 (58%), Positives = 133/172 (77%)
Query: 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166
+DVAWH+ +E++FGS DD +L+IWD R++ + H V H E+N LSFNP++E++LA
Sbjct: 222 EDVAWHMKNENIFGSAGDDCQLVIWDLRTNQMQ---HQVKVHEREINYLSFNPFNEWVLA 278
Query: 167 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
T S+D TVAL+DLR L LH H+ E+FQV+W P++ET+LASSG DRRL VWD++++
Sbjct: 279 TASSDSTVALFDLRKLTAPLHVLSKHEGEVFQVEWDPNHETVLASSGEDRRLMVWDINRV 338
Query: 227 GEEQ-STE-DAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276
G+EQ E DAEDGPPELLF HGGH AKISDF+WN +EPWVI SV+EDN +Q
Sbjct: 339 GDEQLEIELDAEDGPPELLFSHGGHKAKISDFAWNKDEPWVISSVAEDNSLQ 390
Score = 179 (68.1 bits), Expect = 4.2e-16, Sum P(2) = 4.2e-16
Identities = 44/167 (26%), Positives = 82/167 (49%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWD---TRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYIL 165
+AW E S + DQ++ +WD T + V P H + H + + ++++ +E I
Sbjct: 175 LAWSSFKEGYLLSGSQDQRICLWDVSATATDKVLNPMHVYEGHQSIIEDVAWHMKNENIF 234
Query: 166 ATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 225
+ D + +WDLR +++ H + H+ EI + ++P NE +LA++ +D + ++DL K
Sbjct: 235 GSAGDDCQLVIWDLRTNQMQ-HQVKVHEREINYLSFNPFNEWVLATASSDSTVALFDLRK 293
Query: 226 IGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED 272
+ P +L H G ++ W+PN V+ S ED
Sbjct: 294 L----------TAPLHVLSKHEGEVFQVE---WDPNHETVLASSGED 327
Score = 133 (51.9 bits), Expect = 8.0e-11, Sum P(2) = 8.0e-11
Identities = 39/138 (28%), Positives = 63/138 (45%)
Query: 141 PSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNL---KL--KLHSFESHKDE 195
P + H E L+++ + E L +GS D+ + LWD+ K+ +H +E H+
Sbjct: 161 PDLRLMGHEQEGYGLAWSSFKEGYLLSGSQDQRICLWDVSATATDKVLNPMHVYEGHQSI 220
Query: 196 IFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISD 255
I V W NE I S+G D +L +WDL + + Q H +I+
Sbjct: 221 IEDVAWHMKNENIFGSAGDDCQLVIWDL-RTNQMQHQVKV-------------HEREINY 266
Query: 256 FSWNPNEPWVICSVSEDN 273
S+NP WV+ + S D+
Sbjct: 267 LSFNPFNEWVLATASSDS 284
Score = 119 (46.9 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 31/144 (21%), Positives = 67/144 (46%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATG 168
++++ +E + + + D + ++D R ++ P H + H EV + ++P E +LA+
Sbjct: 267 LSFNPFNEWVLATASSDSTVALFDLRK--LTAPLHVLSKHEGEVFQVEWDPNHETVLASS 324
Query: 169 SADKTVALWDLRN-----LKLKLH----------SFESHKDEIFQVQWSPHNETILASSG 213
D+ + +WD+ L+++L S HK +I W+ +++S
Sbjct: 325 GEDRRLMVWDINRVGDEQLEIELDAEDGPPELLFSHGGHKAKISDFAWNKDEPWVISSVA 384
Query: 214 TDRRLHVWDLSKIGEEQSTEDAED 237
D L VW +++ + ED +D
Sbjct: 385 EDNSLQVWQMAESIYREDDEDEDD 408
Score = 91 (37.1 bits), Expect = 9.9e-62, Sum P(2) = 9.9e-62
Identities = 17/37 (45%), Positives = 27/37 (72%)
Query: 40 LCVAEPFDDAVEERVINEEYKIWKKNTPFLYDLVVNN 76
+ E D+A ++V EE+ IWK+NTPFLYDL++++
Sbjct: 1 MAAEEGKDEAGLDQV-EEEFSIWKRNTPFLYDLMISH 36
>WB|WBGene00004312 [details] [associations]
symbol:rba-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0001703 "gastrulation with
mouth forming first" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0016246 "RNA interference" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0045138 "tail tip
morphogenesis" evidence=IMP] [GO:0001708 "cell fate specification"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0001708 GO:GO:0009792 GO:GO:0006915
GO:GO:0016246 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0006351
GO:GO:0016568 GO:GO:0040035 GO:GO:0045138
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0001703 HOGENOM:HOG000160330 EMBL:Z81097
OMA:MPDVTKT PIR:T23385 RefSeq:NP_492551.1 ProteinModelPortal:P90917
SMR:P90917 STRING:P90917 PaxDb:P90917 EnsemblMetazoa:K07A1.11.1
EnsemblMetazoa:K07A1.11.2 GeneID:172801 KEGG:cel:CELE_K07A1.11
UCSC:K07A1.11 CTD:172801 WormBase:K07A1.11 InParanoid:P90917
NextBio:877059 Uniprot:P90917
Length = 412
Score = 567 (204.7 bits), Expect = 2.6e-61, Sum P(2) = 2.6e-61
Identities = 106/185 (57%), Positives = 135/185 (72%)
Query: 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166
+DV++H LH +FGSV DD+KL +WD R SKP T HTAEVNC++FNP+SEYILA
Sbjct: 225 EDVSFHALHNFVFGSVGDDRKLNLWDLRQ---SKPQLTAVGHTAEVNCITFNPFSEYILA 281
Query: 167 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
TGS DKTVALWD+RN++ K+++ + H DEIFQV +SPH ET+LASSG+D R+ VWD+SKI
Sbjct: 282 TGSVDKTVALWDMRNMRKKMYTLKHHNDEIFQVSFSPHYETVLASSGSDDRVIVWDISKI 341
Query: 227 GEEQSTEDAEDG--PPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ--EYCDST 282
+ S+ A PPE++FIH GHT K++DFSWNPN PW ICS E N +Q E +S
Sbjct: 342 QDPSSSSAASSDSVPPEVIFIHAGHTGKVADFSWNPNRPWTICSSDEFNALQVWEVSNSL 401
Query: 283 DSDTK 287
S K
Sbjct: 402 VSSEK 406
Score = 129 (50.5 bits), Expect = 2.1e-10, Sum P(3) = 2.1e-10
Identities = 29/128 (22%), Positives = 59/128 (46%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSK----PSHTVDAHTAEVNCLSFNPYSEYI 164
++W E + DD + WD ++ P H++ +SF+ ++
Sbjct: 177 MSWSNTREGHLLTAGDDGMICHWDINANQTISGQIVPQSKFKGHSSNAEDVSFHALHNFV 236
Query: 165 LATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLS 224
+ D+ + LWDLR K +L + H E+ + ++P +E ILA+ D+ + +WD+
Sbjct: 237 FGSVGDDRKLNLWDLRQSKPQLTAV-GHTAEVNCITFNPFSEYILATGSVDKTVALWDMR 295
Query: 225 KIGEEQST 232
+ ++ T
Sbjct: 296 NMRKKMYT 303
Score = 80 (33.2 bits), Expect = 6.7e-05, Sum P(3) = 6.7e-05
Identities = 25/108 (23%), Positives = 50/108 (46%)
Query: 168 GSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIG 227
G + + A WD ++K++ H E+ + ++ PHN I+AS G ++++D +K
Sbjct: 101 GYGEGSAAKWDT---EIKIN----HPGEVHRARYMPHNPFIIASRGPSDDVYIFDYTKHP 153
Query: 228 EEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIM 275
E +D + P L GH + SW+ + + +D ++
Sbjct: 154 SEP--KDTKFRPQLRL---KGHEGEGYGMSWSNTREGHLLTAGDDGMI 196
Score = 80 (33.2 bits), Expect = 6.7e-05, Sum P(3) = 6.7e-05
Identities = 39/173 (22%), Positives = 71/173 (41%)
Query: 108 DVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILAT 167
D W E FG + WDT K +H + H A + P++ +I+A+
Sbjct: 89 DAKWDSEREE-FGGYGEGSAAK-WDTEI----KINHPGEVHRAR-----YMPHNPFIIAS 137
Query: 168 GSADKTVALWDL-------RNLKLKLH-SFESHKDEIFQVQWSPHNETILASSGTDRRLH 219
V ++D ++ K + + H+ E + + WS E L ++G D +
Sbjct: 138 RGPSDDVYIFDYTKHPSEPKDTKFRPQLRLKGHEGEGYGMSWSNTREGHLLTAGDDGMIC 197
Query: 220 VWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED 272
WD++ + S + P+ F GH++ D S++ +V SV +D
Sbjct: 198 HWDINA-NQTISGQIV----PQSKF--KGHSSNAEDVSFHALHNFVFGSVGDD 243
Score = 78 (32.5 bits), Expect = 2.6e-61, Sum P(2) = 2.6e-61
Identities = 13/23 (56%), Positives = 18/23 (78%)
Query: 56 NEEYKIWKKNTPFLYDLVVNNYV 78
++E++IWKKN P+LYD VV V
Sbjct: 11 SKEHRIWKKNVPYLYDTVVTKEV 33
Score = 50 (22.7 bits), Expect = 2.1e-10, Sum P(3) = 2.1e-10
Identities = 14/70 (20%), Positives = 32/70 (45%)
Query: 367 SIWSMTDEQREYYKTQFHNLQRHKSVSDPSYHLISGQVARKFFENSKLPVTELRKIWYPD 426
++W M + +++ Y + HN + + P Y + + ++ V ++ KI P
Sbjct: 290 ALWDMRNMRKKMYTLKHHNDEIFQVSFSPHYETVLASSG----SDDRVIVWDISKIQDPS 345
Query: 427 SNKILSTWNV 436
S+ S+ +V
Sbjct: 346 SSSAASSDSV 355
>POMBASE|SPCC1672.10 [details] [associations]
symbol:mis16 "kinetochore protein Mis16" species:4896
"Schizosaccharomyces pombe" [GO:0000070 "mitotic sister chromatid
segregation" evidence=IMP] [GO:0000778 "condensed nuclear
chromosome kinetochore" evidence=IDA] [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006995 "cellular response to nitrogen starvation"
evidence=IMP] [GO:0016575 "histone deacetylation" evidence=IMP]
[GO:0031055 "chromatin remodeling at centromere" evidence=IMP]
[GO:0031066 "regulation of histone deacetylation at centromere"
evidence=IMP] [GO:0031511 "Mis6-Sim4 complex" evidence=TAS]
[GO:0034501 "protein localization to kinetochore" evidence=IMP]
[GO:0051382 "kinetochore assembly" evidence=TAS] [GO:0070317
"negative regulation of G0 to G1 transition" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPCC1672.10 GO:GO:0005829 GO:GO:0070317 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0006281 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000790 GO:GO:0000070
GO:GO:0000778 GO:GO:0034501 GO:GO:0006995 GO:GO:0051382
GO:GO:0016575 KO:K10752 InterPro:IPR022052 Pfam:PF12265 PIR:T41054
RefSeq:NP_587881.1 ProteinModelPortal:O94244 SMR:O94244
IntAct:O94244 STRING:O94244 PRIDE:O94244 EnsemblFungi:SPCC1672.10.1
GeneID:2539214 KEGG:spo:SPCC1672.10 HOGENOM:HOG000160330
OMA:NSCIIAT OrthoDB:EOG412QFD NextBio:20800384 GO:GO:0031511
GO:GO:0031055 GO:GO:0031066 Uniprot:O94244
Length = 430
Score = 547 (197.6 bits), Expect = 3.3e-61, Sum P(2) = 3.3e-61
Identities = 98/174 (56%), Positives = 132/174 (75%)
Query: 108 DVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILAT 167
DV +H HE+L SV+DD L I DTR + + + AH+ +N ++ NP+++Y+LAT
Sbjct: 240 DVQFHPQHEALLASVSDDCTLQIHDTRLNPEEEAPKVIQAHSKAINAVAINPFNDYLLAT 299
Query: 168 GSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIG 227
SADKTVALWDLRN +LH+ E H+DE++ ++WSPH+E ILASS TDRR+ +WDL KIG
Sbjct: 300 ASADKTVALWDLRNPYQRLHTLEGHEDEVYGLEWSPHDEPILASSSTDRRVCIWDLEKIG 359
Query: 228 EEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDS 281
EEQ+ EDAEDG PELLF+HGGHT +IS+FSW PNE WV+ S+++DNI+Q + S
Sbjct: 360 EEQTPEDAEDGSPELLFMHGGHTNRISEFSWCPNERWVVGSLADDNILQIWSPS 413
Score = 141 (54.7 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 35/131 (26%), Positives = 62/131 (47%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATG 168
VA + ++ L + + D+ + +WD R N + HT++ H EV L ++P+ E ILA+
Sbjct: 287 VAINPFNDYLLATASADKTVALWDLR--NPYQRLHTLEGHEDEVYGLEWSPHDEPILASS 344
Query: 169 SADKTVALWDLRNLKLK-------------LHSFESHKDEIFQVQWSPHNETILASSGTD 215
S D+ V +WDL + + L H + I + W P+ ++ S D
Sbjct: 345 STDRRVCIWDLEKIGEEQTPEDAEDGSPELLFMHGGHTNRISEFSWCPNERWVVGSLADD 404
Query: 216 RRLHVWDLSKI 226
L +W S++
Sbjct: 405 NILQIWSPSRV 415
Score = 124 (48.7 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 44/169 (26%), Positives = 81/169 (47%)
Query: 118 LFGSVADDQKLMIWDTRSHNV-----SKPSHTVDAHTAEVNCLSFNPYSEYILATGSADK 172
+ ++ + I+DT H+ + P + HTAE L +NP LATG+ D+
Sbjct: 146 IIATMGEGGNAYIFDTTCHDALTTGEALPQAVLKGHTAEGFGLCWNPNLPGNLATGAEDQ 205
Query: 173 TVALWDLR-----NLKLKLHS----FESHKDEIFQVQWSPHNETILASSGTDRRLHVWDL 223
+ LWD++ + + K+ S + H D + VQ+ P +E +LAS D L + D
Sbjct: 206 VICLWDVQTQSFTSSETKVISPIAKYHRHTDIVNDVQFHPQHEALLASVSDDCTLQIHD- 264
Query: 224 SKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED 272
+++ E E+A P+++ H+ I+ + NP +++ + S D
Sbjct: 265 TRLNPE---EEA----PKVI---QAHSKAINAVAINPFNDYLLATASAD 303
Score = 97 (39.2 bits), Expect = 3.3e-61, Sum P(2) = 3.3e-61
Identities = 15/25 (60%), Positives = 21/25 (84%)
Query: 52 ERVINEEYKIWKKNTPFLYDLVVNN 76
++ I EEYK+WK+N PFLYDLV+ +
Sbjct: 23 QKTIQEEYKLWKQNVPFLYDLVITH 47
Score = 83 (34.3 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 31/136 (22%), Positives = 57/136 (41%)
Query: 148 HTAEVNCLSFNPYSEYILATGSADKTVALWDLR-------NLKLKLHSFESHKDEIFQVQ 200
H +VN + P I+AT ++D L + H E F +
Sbjct: 130 HDGDVNRARYMPQKPEIIATMGEGGNAYIFDTTCHDALTTGEALPQAVLKGHTAEGFGLC 189
Query: 201 WSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNP 260
W+P+ LA+ D+ + +WD+ + QS +E + + HT ++D ++P
Sbjct: 190 WNPNLPGNLATGAEDQVICLWDV----QTQSFTSSETKVISPIAKYHRHTDIVNDVQFHP 245
Query: 261 NEPWVICSVSEDNIMQ 276
++ SVS+D +Q
Sbjct: 246 QHEALLASVSDDCTLQ 261
Score = 80 (33.2 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 24/97 (24%), Positives = 47/97 (48%)
Query: 192 HKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTA 251
H ++ + ++ P I+A+ G +++D + + +T +A P +L GHTA
Sbjct: 130 HDGDVNRARYMPQKPEIIATMGEGGNAYIFDTT-CHDALTTGEAL--PQAVL---KGHTA 183
Query: 252 KISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKT 288
+ WNPN P + + +ED ++ + T S T +
Sbjct: 184 EGFGLCWNPNLPGNLATGAEDQVICLWDVQTQSFTSS 220
>POMBASE|SPAC29A4.18 [details] [associations]
symbol:prw1 "Clr6 histone deacetylase complex subunit
Prw1" species:4896 "Schizosaccharomyces pombe" [GO:0000070 "mitotic
sister chromatid segregation" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006338 "chromatin
remodeling" evidence=IC] [GO:0006342 "chromatin silencing"
evidence=ISO] [GO:0016575 "histone deacetylation" evidence=IMP]
[GO:0030261 "chromosome condensation" evidence=IMP] [GO:0032221
"Rpd3S complex" evidence=IDA] [GO:0033698 "Rpd3L complex"
evidence=IDA] [GO:0070210 "Rpd3L-Expanded complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPAC29A4.18 GO:GO:0005829 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338
GO:GO:0000070 GO:GO:0006342 GO:GO:0030261 GO:GO:0033698
GO:GO:0070210 GO:GO:0016575 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0032221 HOGENOM:HOG000160330 PIR:T38471
RefSeq:NP_594864.1 ProteinModelPortal:O14021 DIP:DIP-29342N
IntAct:O14021 STRING:O14021 EnsemblFungi:SPAC29A4.18.1
GeneID:2541804 KEGG:spo:SPAC29A4.18 OMA:HISSHEK OrthoDB:EOG4MWCH4
NextBio:20802892 Uniprot:O14021
Length = 431
Score = 485 (175.8 bits), Expect = 3.0e-46, P = 3.0e-46
Identities = 88/175 (50%), Positives = 124/175 (70%)
Query: 108 DVAWHLLHESLFGSVADDQKLMIWDTRSHNVS-KPSHTVDAHTAEVNCLSFNPYSEYILA 166
DV +H H+ L SV+ DQ L + D R + S KP+ +V AH+ ++ ++FNP++++ILA
Sbjct: 239 DVRFHYKHQDLLASVSYDQYLHVHDIRRPDASTKPARSVHAHSGPIHSVAFNPHNDFILA 298
Query: 167 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
T S DKT+ALWDLRNL +LH+ E H+D + ++ +SPH E ILAS+ DRR VWDLS+I
Sbjct: 299 TCSTDKTIALWDLRNLNQRLHTLEGHEDIVTKISFSPHEEPILASTSADRRTLVWDLSRI 358
Query: 227 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDS 281
GE+Q E+A+DGPPELLF+HGGHT+ D W PN W + + +EDNI+Q + S
Sbjct: 359 GEDQPAEEAQDGPPELLFMHGGHTSCTIDMDWCPNYNWTMATAAEDNILQIWTPS 413
Score = 144 (55.7 bits), Expect = 6.3e-07, P = 6.3e-07
Identities = 39/142 (27%), Positives = 70/142 (49%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATG 168
VA++ ++ + + + D+ + +WD R N+++ HT++ H V +SF+P+ E ILA+
Sbjct: 287 VAFNPHNDFILATCSTDKTIALWDLR--NLNQRLHTLEGHEDIVTKISFSPHEEPILAST 344
Query: 169 SADKTVALWDLRNLKLKLHSFES-------------HKDEIFQVQWSPHNETILASSGTD 215
SAD+ +WDL + + E+ H + W P+ +A++ D
Sbjct: 345 SADRRTLVWDLSRIGEDQPAEEAQDGPPELLFMHGGHTSCTIDMDWCPNYNWTMATAAED 404
Query: 216 RRLHVWDLSKI--GEEQSTEDA 235
L +W S+ G EQ EDA
Sbjct: 405 NILQIWTPSRSIWGNEQLEEDA 426
Score = 121 (47.7 bits), Expect = 0.00022, P = 0.00022
Identities = 71/281 (25%), Positives = 114/281 (40%)
Query: 43 AEPFDDAV-EERVINEEYKIWKKNTPFLYDLVVNNYVANISCILNI---SILFFEIIFTQ 98
A+ ++ + +E+ INEEYKIWKKN+PFLYDL++ + L +F E +T+
Sbjct: 13 AQASEEGINQEKCINEEYKIWKKNSPFLYDLIITRALEWPCMSLQWYPEQQIFAEHGYTE 72
Query: 99 NFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFN 158
F R DV +LL +VA Q + T + + D + VN +
Sbjct: 73 QKMFLGVRADVGKYLL------AVASIQLPYLNQTVPPTTMEGASAGDESSLRVNISNLY 126
Query: 159 PYSEYILATG---SADKTVA-LWDLRN--LKLKLHSFESHKDEIFQVQWSPHNETILASS 212
+ E + + D VA + + N L SFES+ SP +
Sbjct: 127 SHPESVCSAKLMPQDDSCVATVGNYHNDVLVFDKESFESYSS----ASESPLKPKYRLTK 182
Query: 213 GTDRRLHV-WD-LSKIGEEQSTEDA-----------EDGPPELLFIH-GGHTAKISDFSW 258
T V W+ LSK ++DA E +L +H H ++SD +
Sbjct: 183 HTQPCTSVCWNFLSKGTLVSGSQDATLSCWDLNAYNESDSASVLKVHISSHEKQVSDVRF 242
Query: 259 NPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGG 299
+ ++ SVS D + + D D T S+ ++ G
Sbjct: 243 HYKHQDLLASVSYDQYLHVH-DIRRPDASTKPARSVHAHSG 282
>SGD|S000000782 [details] [associations]
symbol:HAT2 "Subunit of the Hat1p-Hat2p histone
acetyltransferase complex" species:4932 "Saccharomyces cerevisiae"
[GO:0042393 "histone binding" evidence=IDA] [GO:0000123 "histone
acetyltransferase complex" evidence=IDA;IPI] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0006333 "chromatin assembly or disassembly"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0004402
"histone acetyltransferase activity" evidence=IDA;IMP;IPI]
[GO:0016573 "histone acetylation" evidence=IDA;IMP] [GO:0006348
"chromatin silencing at telomere" evidence=IGI] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000000782 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006281
eggNOG:COG2319 GO:GO:0016573 EMBL:BK006939 GO:GO:0006333
GO:GO:0006348 EMBL:U18795 GO:GO:0042393
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0000123 HOGENOM:HOG000160330 OrthoDB:EOG412QFD
PIR:S50533 RefSeq:NP_010858.3 RefSeq:NP_010861.3
ProteinModelPortal:P39984 SMR:P39984 DIP:DIP-2363N IntAct:P39984
MINT:MINT-654148 STRING:P39984 PaxDb:P39984 PeptideAtlas:P39984
EnsemblFungi:YEL056W GeneID:856654 GeneID:856657 KEGG:sce:YEL053C
KEGG:sce:YEL056W CYGD:YEL056w OMA:VLYDLVI NextBio:982637
Genevestigator:P39984 GermOnline:YEL056W Uniprot:P39984
Length = 401
Score = 371 (135.7 bits), Expect = 7.4e-40, Sum P(2) = 7.4e-40
Identities = 70/169 (41%), Positives = 106/169 (62%)
Query: 108 DVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILAT 167
D WH ++ LFG+V++D L I D R++N + TV N L+F+ +S +LA
Sbjct: 213 DNKWHNFNKDLFGTVSEDSLLKINDVRANNTT--IDTVKC-PQPFNTLAFSHHSSNLLAA 269
Query: 168 GSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIG 227
D V L+DLRN+K LH H+D + +++S H + ++ SSG+D RL +WDL +IG
Sbjct: 270 AGMDSYVYLYDLRNMKEPLHHMSGHEDAVNNLEFSTHVDGVVVSSGSDNRLMMWDLKQIG 329
Query: 228 EEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276
EQ+ +DAEDG PEL+ +H GH + ++DF NP PW++ S E+NI+Q
Sbjct: 330 AEQTPDDAEDGVPELIMVHAGHRSSVNDFDLNPQIPWLVASAEEENILQ 378
Score = 90 (36.7 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 29/143 (20%), Positives = 59/143 (41%)
Query: 95 IFTQNFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNC 154
I T P P + + H +L + D + ++D R N+ +P H + H VN
Sbjct: 245 IDTVKCPQPFNTLAFSHH--SSNLLAAAGMDSYVYLYDLR--NMKEPLHHMSGHEDAVNN 300
Query: 155 LSFNPYSEYILATGSADKTVALWDLRNLKLK-------------LHSFESHKDEIFQVQW 201
L F+ + + ++ + +D + +WDL+ + + + H+ +
Sbjct: 301 LEFSTHVDGVVVSSGSDNRLMMWDLKQIGAEQTPDDAEDGVPELIMVHAGHRSSVNDFDL 360
Query: 202 SPHNETILASSGTDRRLHVWDLS 224
+P ++AS+ + L VW S
Sbjct: 361 NPQIPWLVASAEEENILQVWKCS 383
Score = 88 (36.0 bits), Expect = 0.00098, Sum P(2) = 0.00098
Identities = 25/110 (22%), Positives = 57/110 (51%)
Query: 121 SVADDQKLMIWDTRSH-NVSKPSHTV-DAHTAEVNCLSFNPYSEYILATGSADKTVALWD 178
S +DD + +W+ S + +KP T D H+ +N ++ +++ + T S D + + D
Sbjct: 178 SGSDDHTVALWEVGSGGDPTKPVRTWNDLHSDIINDNKWHNFNKDLFGTVSEDSLLKIND 237
Query: 179 LRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGE 228
+R + + + + + +S H+ +LA++G D ++++DL + E
Sbjct: 238 VRANNTTIDTVKCPQP-FNTLAFSHHSSNLLAAAGMDSYVYLYDLRNMKE 286
Score = 70 (29.7 bits), Expect = 7.4e-40, Sum P(2) = 7.4e-40
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 55 INEEYKIWKKNTPFLYDLV 73
++EEY +WK N P +YD V
Sbjct: 10 VDEEYDLWKSNVPLMYDFV 28
>CGD|CAL0005349 [details] [associations]
symbol:HAT2 species:5476 "Candida albicans" [GO:0000123
"histone acetyltransferase complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA;IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA;IDA] [GO:0016573 "histone acetylation"
evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:2000221
"negative regulation of pseudohyphal growth" evidence=IMP]
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
[GO:0034614 "cellular response to reactive oxygen species"
evidence=IMP] [GO:0006333 "chromatin assembly or disassembly"
evidence=IEA] [GO:0006348 "chromatin silencing at telomere"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005349 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006281 eggNOG:COG2319 GO:GO:0016568
KO:K10752 InterPro:IPR022052 Pfam:PF12265 EMBL:AACQ01000162
EMBL:AACQ01000158 RefSeq:XP_712278.1 RefSeq:XP_712421.1
ProteinModelPortal:Q59RH5 STRING:Q59RH5 GeneID:3645973
GeneID:3646093 KEGG:cal:CaO19.2146 KEGG:cal:CaO19.9693
Uniprot:Q59RH5
Length = 382
Score = 370 (135.3 bits), Expect = 4.0e-39, Sum P(2) = 4.0e-39
Identities = 71/171 (41%), Positives = 109/171 (63%)
Query: 108 DVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILAT 167
DV WH + +LF SV++D + ++D R + V + ++ +N L+F+P++E ++A
Sbjct: 191 DVKWHQFNGNLFASVSEDSHVYLFDARDNKVVSQYYAESSNG--INSLAFSPFAENLVAI 248
Query: 168 GSADKTVALWDLRNLKLK---LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLS 224
G+ + L DLR L LH+ H + I +++SPH++ ILA+ DRR+ +WDL
Sbjct: 249 GNTSSNINLLDLRKLGENSGLLHTMMGHSEGITCMEFSPHHDGILATGSQDRRIIIWDLF 308
Query: 225 KIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIM 275
K+GEEQ EDAEDG PEL +H GHTA +SD SW P + W+I SV++DNI+
Sbjct: 309 KVGEEQQQEDAEDGCPELFMMHAGHTAGVSDLSWCPFKDWMIGSVADDNIV 359
Score = 129 (50.5 bits), Expect = 9.7e-08, Sum P(2) = 9.7e-08
Identities = 30/107 (28%), Positives = 54/107 (50%)
Query: 143 HTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNL--KLKLHSFESHKDEIFQVQ 200
HT+ H+ + C+ F+P+ + ILATGS D+ + +WDL + + + E E+F +
Sbjct: 271 HTMMGHSEGITCMEFSPHHDGILATGSQDRRIIIWDLFKVGEEQQQEDAEDGCPELFMMH 330
Query: 201 -----------WSPHNETILASSGTDRRLHVWDLSK--IGEEQSTED 234
W P + ++ S D +H+W++SK I E++ D
Sbjct: 331 AGHTAGVSDLSWCPFKDWMIGSVADDNIVHLWEISKKLITNEEAEVD 377
Score = 126 (49.4 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 45/199 (22%), Positives = 91/199 (45%)
Query: 76 NYVANISCILNISI--LFFEIIFTQNFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDT 133
N VA I+ + + + L E ++ P + ++W+ + L + ADD + + DT
Sbjct: 114 NIVATINGLGEVDLYNLDTETRYSHFAPHTKNGYGLSWNPKQKGLLVTGADDNFVCVTDT 173
Query: 134 RSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHK 193
++ + S D VN + ++ ++ + A+ S D V L+D R+ K+ +
Sbjct: 174 TTNKTTFKS---DIQKDIVNDVKWHQFNGNLFASVSEDSHVYLFDARDNKVVSQYYAESS 230
Query: 194 DEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKI 253
+ I + +SP E ++A T +++ DL K+GE LL GH+ I
Sbjct: 231 NGINSLAFSPFAENLVAIGNTSSNINLLDLRKLGENSG----------LLHTMMGHSEGI 280
Query: 254 SDFSWNPNEPWVICSVSED 272
+ ++P+ ++ + S+D
Sbjct: 281 TCMEFSPHHDGILATGSQD 299
Score = 64 (27.6 bits), Expect = 4.0e-39, Sum P(2) = 4.0e-39
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 47 DDAVEERVINEEYKIWKKNTPFLYDLV 73
+ E I EEY++W+KN ++Y+ V
Sbjct: 3 EQPTEPLSIKEEYQLWRKNCRYMYEFV 29
>UNIPROTKB|Q59RH5 [details] [associations]
symbol:HAT2 "Histone acetyltransferase type B subunit 2"
species:237561 "Candida albicans SC5314" [GO:0005634 "nucleus"
evidence=IDA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0034614 "cellular response to reactive oxygen species"
evidence=IMP] [GO:2000221 "negative regulation of pseudohyphal
growth" evidence=IMP] [GO:0004402 "histone acetyltransferase
activity" evidence=IDA] [GO:0042393 "histone binding" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0005349 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006281
eggNOG:COG2319 GO:GO:0016568 KO:K10752 InterPro:IPR022052
Pfam:PF12265 EMBL:AACQ01000162 EMBL:AACQ01000158 RefSeq:XP_712278.1
RefSeq:XP_712421.1 ProteinModelPortal:Q59RH5 STRING:Q59RH5
GeneID:3645973 GeneID:3646093 KEGG:cal:CaO19.2146
KEGG:cal:CaO19.9693 Uniprot:Q59RH5
Length = 382
Score = 370 (135.3 bits), Expect = 4.0e-39, Sum P(2) = 4.0e-39
Identities = 71/171 (41%), Positives = 109/171 (63%)
Query: 108 DVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILAT 167
DV WH + +LF SV++D + ++D R + V + ++ +N L+F+P++E ++A
Sbjct: 191 DVKWHQFNGNLFASVSEDSHVYLFDARDNKVVSQYYAESSNG--INSLAFSPFAENLVAI 248
Query: 168 GSADKTVALWDLRNLKLK---LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLS 224
G+ + L DLR L LH+ H + I +++SPH++ ILA+ DRR+ +WDL
Sbjct: 249 GNTSSNINLLDLRKLGENSGLLHTMMGHSEGITCMEFSPHHDGILATGSQDRRIIIWDLF 308
Query: 225 KIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIM 275
K+GEEQ EDAEDG PEL +H GHTA +SD SW P + W+I SV++DNI+
Sbjct: 309 KVGEEQQQEDAEDGCPELFMMHAGHTAGVSDLSWCPFKDWMIGSVADDNIV 359
Score = 129 (50.5 bits), Expect = 9.7e-08, Sum P(2) = 9.7e-08
Identities = 30/107 (28%), Positives = 54/107 (50%)
Query: 143 HTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNL--KLKLHSFESHKDEIFQVQ 200
HT+ H+ + C+ F+P+ + ILATGS D+ + +WDL + + + E E+F +
Sbjct: 271 HTMMGHSEGITCMEFSPHHDGILATGSQDRRIIIWDLFKVGEEQQQEDAEDGCPELFMMH 330
Query: 201 -----------WSPHNETILASSGTDRRLHVWDLSK--IGEEQSTED 234
W P + ++ S D +H+W++SK I E++ D
Sbjct: 331 AGHTAGVSDLSWCPFKDWMIGSVADDNIVHLWEISKKLITNEEAEVD 377
Score = 126 (49.4 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 45/199 (22%), Positives = 91/199 (45%)
Query: 76 NYVANISCILNISI--LFFEIIFTQNFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDT 133
N VA I+ + + + L E ++ P + ++W+ + L + ADD + + DT
Sbjct: 114 NIVATINGLGEVDLYNLDTETRYSHFAPHTKNGYGLSWNPKQKGLLVTGADDNFVCVTDT 173
Query: 134 RSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHK 193
++ + S D VN + ++ ++ + A+ S D V L+D R+ K+ +
Sbjct: 174 TTNKTTFKS---DIQKDIVNDVKWHQFNGNLFASVSEDSHVYLFDARDNKVVSQYYAESS 230
Query: 194 DEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKI 253
+ I + +SP E ++A T +++ DL K+GE LL GH+ I
Sbjct: 231 NGINSLAFSPFAENLVAIGNTSSNINLLDLRKLGENSG----------LLHTMMGHSEGI 280
Query: 254 SDFSWNPNEPWVICSVSED 272
+ ++P+ ++ + S+D
Sbjct: 281 TCMEFSPHHDGILATGSQD 299
Score = 64 (27.6 bits), Expect = 4.0e-39, Sum P(2) = 4.0e-39
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 47 DDAVEERVINEEYKIWKKNTPFLYDLV 73
+ E I EEY++W+KN ++Y+ V
Sbjct: 3 EQPTEPLSIKEEYQLWRKNCRYMYEFV 29
>GENEDB_PFALCIPARUM|PF14_0314 [details] [associations]
symbol:PF14_0314 "chromatin assembly factor 1
p55 subunit, putative" species:5833 "Plasmodium falciparum"
[GO:0051082 "unfolded protein binding" evidence=ISS] [GO:0042393
"histone binding" evidence=ISS] [GO:0006334 "nucleosome assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0051082 EMBL:AE014187 GO:GO:0042393
GO:GO:0006334 GO:GO:0005678 KO:K10752 InterPro:IPR022052
Pfam:PF12265 RefSeq:XP_001348488.2 ProteinModelPortal:Q8ILD0
EnsemblProtists:PF14_0314:mRNA GeneID:811896 KEGG:pfa:PF14_0314
EuPathDB:PlasmoDB:PF3D7_1433300 HOGENOM:HOG000281237 Uniprot:Q8ILD0
Length = 428
Score = 316 (116.3 bits), Expect = 8.8e-32, Sum P(2) = 8.8e-32
Identities = 79/230 (34%), Positives = 131/230 (56%)
Query: 75 NNYVANIS-----CI--LNISI-LFFEIIFTQNFPFPLSRQDVAWHLLHESLFGSVADDQ 126
NNY+++ CI +N S + I+ N PL QD W+ ++ SV+++
Sbjct: 205 NNYISSCGDDSYLCIWDMNTSDKIMHPIVKYFNHNIPL--QDCCWN---DNNVLSVSENG 259
Query: 127 KLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKL 186
+ I+D R+ V +++ A +N + NP+++ I AT +K + LWD+R L
Sbjct: 260 HINIYDIRNKTVV---NSICATNCTLNSIDVNPHNKNIFATAGTNKEIDLWDMRFTNKSL 316
Query: 187 HSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIH 246
H S K+ I +++W IL+SS +D+ ++ +D +KIG EQ+ ED++DGPPEL+FIH
Sbjct: 317 HRIISQKETIIKLKWDKFQPGILSSSTSDKFIYFFDTNKIGIEQTYEDSQDGPPELIFIH 376
Query: 247 GGHTAKISDFSWNPNEPWVICSVSEDNIM-------QEYCDSTDS--DTK 287
GGH++ I D+S N + +I S+SEDN + Q Y D++D+ DT+
Sbjct: 377 GGHSSNILDYSLNNSYSMMISSISEDNTLHIWQPSKQAYEDASDTYDDTE 426
Score = 48 (22.0 bits), Expect = 8.8e-32, Sum P(2) = 8.8e-32
Identities = 7/18 (38%), Positives = 13/18 (72%)
Query: 57 EEYKIWKKNTPFLYDLVV 74
+ YK W+ NT LY++++
Sbjct: 30 DNYKYWQYNTILLYNVIM 47
>UNIPROTKB|Q8ILD0 [details] [associations]
symbol:PF14_0314 "Chromatin assembly factor 1 P55 subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0006334
"nucleosome assembly" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0051082 "unfolded protein binding" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0051082 EMBL:AE014187 GO:GO:0042393
GO:GO:0006334 GO:GO:0005678 KO:K10752 InterPro:IPR022052
Pfam:PF12265 RefSeq:XP_001348488.2 ProteinModelPortal:Q8ILD0
EnsemblProtists:PF14_0314:mRNA GeneID:811896 KEGG:pfa:PF14_0314
EuPathDB:PlasmoDB:PF3D7_1433300 HOGENOM:HOG000281237 Uniprot:Q8ILD0
Length = 428
Score = 316 (116.3 bits), Expect = 8.8e-32, Sum P(2) = 8.8e-32
Identities = 79/230 (34%), Positives = 131/230 (56%)
Query: 75 NNYVANIS-----CI--LNISI-LFFEIIFTQNFPFPLSRQDVAWHLLHESLFGSVADDQ 126
NNY+++ CI +N S + I+ N PL QD W+ ++ SV+++
Sbjct: 205 NNYISSCGDDSYLCIWDMNTSDKIMHPIVKYFNHNIPL--QDCCWN---DNNVLSVSENG 259
Query: 127 KLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKL 186
+ I+D R+ V +++ A +N + NP+++ I AT +K + LWD+R L
Sbjct: 260 HINIYDIRNKTVV---NSICATNCTLNSIDVNPHNKNIFATAGTNKEIDLWDMRFTNKSL 316
Query: 187 HSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIH 246
H S K+ I +++W IL+SS +D+ ++ +D +KIG EQ+ ED++DGPPEL+FIH
Sbjct: 317 HRIISQKETIIKLKWDKFQPGILSSSTSDKFIYFFDTNKIGIEQTYEDSQDGPPELIFIH 376
Query: 247 GGHTAKISDFSWNPNEPWVICSVSEDNIM-------QEYCDSTDS--DTK 287
GGH++ I D+S N + +I S+SEDN + Q Y D++D+ DT+
Sbjct: 377 GGHSSNILDYSLNNSYSMMISSISEDNTLHIWQPSKQAYEDASDTYDDTE 426
Score = 48 (22.0 bits), Expect = 8.8e-32, Sum P(2) = 8.8e-32
Identities = 7/18 (38%), Positives = 13/18 (72%)
Query: 57 EEYKIWKKNTPFLYDLVV 74
+ YK W+ NT LY++++
Sbjct: 30 DNYKYWQYNTILLYNVIM 47
>TAIR|locus:2050372 [details] [associations]
symbol:FVE species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0009826 "unidimensional
cell growth" evidence=IMP] [GO:0009908 "flower development"
evidence=IMP] [GO:0009965 "leaf morphogenesis" evidence=IMP]
[GO:0010090 "trichome morphogenesis" evidence=IMP] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=ISS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006281 "DNA repair"
evidence=IMP] [GO:0010224 "response to UV-B" evidence=IEP]
[GO:0046872 "metal ion binding" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 GO:GO:0030154
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005730 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0046872
GO:GO:0006281 eggNOG:COG2319 GO:GO:0006351 GO:GO:0016568
EMBL:AC005917 GO:GO:0009908 GO:GO:0010224 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000160330
EMBL:AF498101 EMBL:AF498102 EMBL:AY849994 EMBL:AY059799
EMBL:AY057655 EMBL:AY081447 EMBL:AF028711 EMBL:Z37286 EMBL:Z37287
IPI:IPI00539247 PIR:G84577 RefSeq:NP_565456.2 UniGene:At.20032
ProteinModelPortal:O22607 SMR:O22607 DIP:DIP-59614N STRING:O22607
PaxDb:O22607 PRIDE:O22607 EnsemblPlants:AT2G19520.1 GeneID:816471
KEGG:ath:AT2G19520 GeneFarm:2818 TAIR:At2g19520 InParanoid:O22607
OMA:CIRELEQ PhylomeDB:O22607 ProtClustDB:CLSN2918036
Genevestigator:O22607 GermOnline:AT2G19520 Uniprot:O22607
Length = 507
Score = 322 (118.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 65/172 (37%), Positives = 99/172 (57%)
Query: 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVD-AHTAEVNCLSFNPYSEYIL 165
+DVA+ F SV DD L++WD R+ + P V+ AH A+++C+ +NP+ + ++
Sbjct: 296 EDVAFSPTSAQEFCSVGDDSCLILWDARTG--TNPVTKVEKAHDADLHCVDWNPHDDNLI 353
Query: 166 ATGSADKTVALWDLRNLKLK-----LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHV 220
TGSAD TV L+D R L ++ FE HK + VQWSP ++ SS D L++
Sbjct: 354 LTGSADNTVRLFDRRKLTANGVGSPIYKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLNI 413
Query: 221 WDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED 272
WD ++ ++ ++ A P L F H GH K+ DF WN ++PW I SVS+D
Sbjct: 414 WDYDRVSKK--SDRAAKSPAGLFFQHAGHRDKVVDFHWNASDPWTIVSVSDD 463
Score = 121 (47.7 bits), Expect = 0.00029, P = 0.00029
Identities = 44/196 (22%), Positives = 80/196 (40%)
Query: 92 FEIIFTQNFPFPLS----RQDVAWHLL-HESLFGSVADDQKLMIWDTRSHNVSKPSHTVD 146
F + PF LS + V W + H + G+ + +I T S TV
Sbjct: 224 FALAMCPTEPFVLSGGKDKSVVLWSIQDHITTIGTDSKSSGSIIKQTGEGTDKNESPTVG 283
Query: 147 ------AHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFE-SHKDEIFQV 199
H V ++F+P S + D + LWD R + E +H ++ V
Sbjct: 284 PRGVYHGHEDTVEDVAFSPTSAQEFCSVGDDSCLILWDARTGTNPVTKVEKAHDADLHCV 343
Query: 200 QWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWN 259
W+PH++ ++ + D + ++D K+ T + P ++ GH A + W+
Sbjct: 344 DWNPHDDNLILTGSADNTVRLFDRRKL-----TANGVGSP---IYKFEGHKAAVLCVQWS 395
Query: 260 PNEPWVICSVSEDNIM 275
P++ V S +ED ++
Sbjct: 396 PDKSSVFGSSAEDGLL 411
>UNIPROTKB|Q5JNZ6 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9606
"Homo sapiens" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0000122 HOGENOM:HOG000160330 EMBL:AL929302 UniGene:Hs.495755
HGNC:HGNC:9890 ChiTaRS:RBBP7 SMR:Q5JNZ6 Ensembl:ENST00000425696
Uniprot:Q5JNZ6
Length = 85
Score = 316 (116.3 bits), Expect = 2.4e-28, P = 2.4e-28
Identities = 57/59 (96%), Positives = 58/59 (98%)
Query: 218 LHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276
L+VWDLSKIGEEQS EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ
Sbjct: 1 LNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 59
>TAIR|locus:2134408 [details] [associations]
symbol:NFC5 "AT4G29730" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006351 GO:GO:0016568
EMBL:AL161575 EMBL:AL079344 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000160330
ProtClustDB:CLSN2918036 EMBL:BT010610 EMBL:AK176425 IPI:IPI00548369
PIR:T09936 RefSeq:NP_194702.2 UniGene:At.31893
ProteinModelPortal:Q9SU78 SMR:Q9SU78 STRING:Q9SU78 PaxDb:Q9SU78
PRIDE:Q9SU78 EnsemblPlants:AT4G29730.1 GeneID:829094
KEGG:ath:AT4G29730 GeneFarm:2946 TAIR:At4g29730 InParanoid:Q9SU78
OMA:VGKKSER PhylomeDB:Q9SU78 Genevestigator:Q9SU78
GermOnline:AT4G29730 Uniprot:Q9SU78
Length = 487
Score = 311 (114.5 bits), Expect = 1.6e-27, P = 1.6e-27
Identities = 65/172 (37%), Positives = 99/172 (57%)
Query: 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVD-AHTAEVNCLSFNPYSEYIL 165
+DVA+ F SV DD LM+WD R+ + P+ V+ AH A+++C+ +NP+ ++
Sbjct: 276 EDVAFCPSSAQEFCSVGDDSCLMLWDARTG--TSPAMKVEKAHDADLHCVDWNPHDNNLI 333
Query: 166 ATGSADKTVALWDLRNLKLK-----LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHV 220
TGSAD TV ++D RNL ++ FE H+ + VQWSP ++ SS D L++
Sbjct: 334 LTGSADNTVRVFDRRNLTSNGVGSPVYKFEGHRAAVLCVQWSPDKSSVFGSSAEDGLLNI 393
Query: 221 WDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED 272
WD ++G++ +E A P L F H GH K+ DF W+ PW I SVS++
Sbjct: 394 WDCDRVGKK--SERATKTPDGLFFQHAGHRDKVVDFHWSLLNPWTIVSVSDN 443
Score = 117 (46.2 bits), Expect = 0.00075, P = 0.00075
Identities = 33/142 (23%), Positives = 60/142 (42%)
Query: 141 PSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFE-SHKDEIFQV 199
P + H V ++F P S + D + LWD R E +H ++ V
Sbjct: 264 PRGIYNGHKDTVEDVAFCPSSAQEFCSVGDDSCLMLWDARTGTSPAMKVEKAHDADLHCV 323
Query: 200 QWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWN 259
W+PH+ ++ + D + V+D + T + P ++ GH A + W+
Sbjct: 324 DWNPHDNNLILTGSADNTVRVFDRRNL-----TSNGVGSP---VYKFEGHRAAVLCVQWS 375
Query: 260 PNEPWVICSVSEDNIMQEY-CD 280
P++ V S +ED ++ + CD
Sbjct: 376 PDKSSVFGSSAEDGLLNIWDCD 397
>GENEDB_PFALCIPARUM|PFA0520c [details] [associations]
symbol:PFA0520c "chromatin assembly factor 1
protein WD40 domain, putative" species:5833 "Plasmodium falciparum"
[GO:0051082 "unfolded protein binding" evidence=ISS] [GO:0042393
"histone binding" evidence=ISS] [GO:0006334 "nucleosome assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0051082
GO:GO:0042393 GO:GO:0006334 GO:GO:0005678 KO:K10752
InterPro:IPR022052 Pfam:PF12265 EMBL:AL844501 OMA:VLYDLVI
RefSeq:XP_001351036.1 ProteinModelPortal:Q8I238 PRIDE:Q8I238
EnsemblProtists:PFA0520c:mRNA GeneID:813241 KEGG:pfa:PFA_0520c
HOGENOM:HOG000283790 ProtClustDB:CLSZ2433094 Uniprot:Q8I238
Length = 446
Score = 281 (104.0 bits), Expect = 4.0e-25, Sum P(2) = 4.0e-25
Identities = 58/162 (35%), Positives = 99/162 (61%)
Query: 117 SLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVAL 176
+L + AD+ ++I+D R + ++P+ VN ++ N ++ + A+GS + + +
Sbjct: 264 NLILACADNGYILIFDFRIKS-NEPAQQTLGQQVPVNTVALNTFTG-LFASGSDNGKIKV 321
Query: 177 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAE 236
WDL+ H +HK+ I ++ +SP++ +ILAS+ +R ++V+DL+KIGEE D
Sbjct: 322 WDLKKFHEPQHIINAHKEAIIRLNFSPNDASILASASNNRFINVYDLNKIGEELDAIDLS 381
Query: 237 DGPPELLFIHGGHTAKISDFSWNPNEP--WVICSVSEDNIMQ 276
DGP EL+F HGGHT ++DF+WN ++ I S SEDN +Q
Sbjct: 382 DGPSELIFSHGGHTQPVTDFNWNHHKKLKMFIGSTSEDNTLQ 423
Score = 54 (24.1 bits), Expect = 4.0e-25, Sum P(2) = 4.0e-25
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 48 DAVEERVINEEYKIWKKNTPFLYDLV 73
D EE + ++ WK N+ LYD V
Sbjct: 36 DEDEEEDVETQFNNWKTNSGLLYDFV 61
>UNIPROTKB|Q8I238 [details] [associations]
symbol:PFA_0520c "Chromatin assembly factor 1 protein WD40
domain, putative" species:36329 "Plasmodium falciparum 3D7"
[GO:0006334 "nucleosome assembly" evidence=ISS] [GO:0042393
"histone binding" evidence=ISS] [GO:0051082 "unfolded protein
binding" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0051082
GO:GO:0042393 GO:GO:0006334 GO:GO:0005678 KO:K10752
InterPro:IPR022052 Pfam:PF12265 EMBL:AL844501 OMA:VLYDLVI
RefSeq:XP_001351036.1 ProteinModelPortal:Q8I238 PRIDE:Q8I238
EnsemblProtists:PFA0520c:mRNA GeneID:813241 KEGG:pfa:PFA_0520c
HOGENOM:HOG000283790 ProtClustDB:CLSZ2433094 Uniprot:Q8I238
Length = 446
Score = 281 (104.0 bits), Expect = 4.0e-25, Sum P(2) = 4.0e-25
Identities = 58/162 (35%), Positives = 99/162 (61%)
Query: 117 SLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVAL 176
+L + AD+ ++I+D R + ++P+ VN ++ N ++ + A+GS + + +
Sbjct: 264 NLILACADNGYILIFDFRIKS-NEPAQQTLGQQVPVNTVALNTFTG-LFASGSDNGKIKV 321
Query: 177 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAE 236
WDL+ H +HK+ I ++ +SP++ +ILAS+ +R ++V+DL+KIGEE D
Sbjct: 322 WDLKKFHEPQHIINAHKEAIIRLNFSPNDASILASASNNRFINVYDLNKIGEELDAIDLS 381
Query: 237 DGPPELLFIHGGHTAKISDFSWNPNEP--WVICSVSEDNIMQ 276
DGP EL+F HGGHT ++DF+WN ++ I S SEDN +Q
Sbjct: 382 DGPSELIFSHGGHTQPVTDFNWNHHKKLKMFIGSTSEDNTLQ 423
Score = 54 (24.1 bits), Expect = 4.0e-25, Sum P(2) = 4.0e-25
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 48 DAVEERVINEEYKIWKKNTPFLYDLV 73
D EE + ++ WK N+ LYD V
Sbjct: 36 DEDEEEDVETQFNNWKTNSGLLYDFV 61
>CGD|CAL0003130 [details] [associations]
symbol:orf19.7185 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0003130 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR022052 Pfam:PF12265 EMBL:AACQ01000089
RefSeq:XP_715234.1 RefSeq:XP_889000.1 ProteinModelPortal:Q5A0B0
GeneID:3643101 GeneID:3704066 KEGG:cal:CaO19.7185
KEGG:cal:CaO19_7185 HOGENOM:HOG000137539 Uniprot:Q5A0B0
Length = 485
Score = 254 (94.5 bits), Expect = 4.1e-25, Sum P(2) = 4.1e-25
Identities = 59/174 (33%), Positives = 89/174 (51%)
Query: 118 LFGSVADDQKLMIWDTRSHNVS-KPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVAL 176
LFGSV+DD DTR + P TV+ + NC+ F+P + + ATG D V+L
Sbjct: 269 LFGSVSDDSTTQFHDTRVNATDINPVITVENSHIQ-NCIQFHPDIQTLYATGGKDNVVSL 327
Query: 177 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDA- 235
+D+RN F H D + Q+QW +N IL S G D+R+ WDL + E+ + DA
Sbjct: 328 YDIRNYSTPFRKFYGHNDSVRQLQWDWNNPDILVSCGLDKRIIFWDLKNLDEDFTYPDAT 387
Query: 236 EDGP-------------PELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276
+G P L ++HGGHT + +DF +P + SV +D +++
Sbjct: 388 SNGKDTNSKRKQAVKTDPCLKYVHGGHTRRTNDFDIHPKVKNIFGSVGDDKLLE 441
Score = 93 (37.8 bits), Expect = 4.1e-25, Sum P(2) = 4.1e-25
Identities = 13/27 (48%), Positives = 21/27 (77%)
Query: 47 DDAVEERVINEEYKIWKKNTPFLYDLV 73
+ ++E+++NEE+KIWKK P LYD +
Sbjct: 64 EQQLQEKIVNEEFKIWKKTVPLLYDFI 90
>UNIPROTKB|Q5A0B0 [details] [associations]
symbol:CaO19.7185 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0003130 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR022052 Pfam:PF12265 EMBL:AACQ01000089
RefSeq:XP_715234.1 RefSeq:XP_889000.1 ProteinModelPortal:Q5A0B0
GeneID:3643101 GeneID:3704066 KEGG:cal:CaO19.7185
KEGG:cal:CaO19_7185 HOGENOM:HOG000137539 Uniprot:Q5A0B0
Length = 485
Score = 254 (94.5 bits), Expect = 4.1e-25, Sum P(2) = 4.1e-25
Identities = 59/174 (33%), Positives = 89/174 (51%)
Query: 118 LFGSVADDQKLMIWDTRSHNVS-KPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVAL 176
LFGSV+DD DTR + P TV+ + NC+ F+P + + ATG D V+L
Sbjct: 269 LFGSVSDDSTTQFHDTRVNATDINPVITVENSHIQ-NCIQFHPDIQTLYATGGKDNVVSL 327
Query: 177 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDA- 235
+D+RN F H D + Q+QW +N IL S G D+R+ WDL + E+ + DA
Sbjct: 328 YDIRNYSTPFRKFYGHNDSVRQLQWDWNNPDILVSCGLDKRIIFWDLKNLDEDFTYPDAT 387
Query: 236 EDGP-------------PELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276
+G P L ++HGGHT + +DF +P + SV +D +++
Sbjct: 388 SNGKDTNSKRKQAVKTDPCLKYVHGGHTRRTNDFDIHPKVKNIFGSVGDDKLLE 441
Score = 93 (37.8 bits), Expect = 4.1e-25, Sum P(2) = 4.1e-25
Identities = 13/27 (48%), Positives = 21/27 (77%)
Query: 47 DDAVEERVINEEYKIWKKNTPFLYDLV 73
+ ++E+++NEE+KIWKK P LYD +
Sbjct: 64 EQQLQEKIVNEEFKIWKKTVPLLYDFI 90
>SGD|S000000399 [details] [associations]
symbol:MSI1 "Subunit of chromatin assembly factor I (CAF-1)"
species:4932 "Saccharomyces cerevisiae" [GO:0033186 "CAF-1 complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005737
"cytoplasm" evidence=IEA;IDA] [GO:0006335 "DNA
replication-dependent nucleosome assembly" evidence=IDA]
[GO:0042393 "histone binding" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000000399 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 EMBL:BK006936 EMBL:Z21487
GO:GO:0006335 GO:GO:0033186 InterPro:IPR022052 Pfam:PF12265
HOGENOM:HOG000160330 EMBL:M27300 EMBL:Z36064 EMBL:AY692834
PIR:S07865 RefSeq:NP_009754.1 ProteinModelPortal:P13712 SMR:P13712
DIP:DIP-338N IntAct:P13712 MINT:MINT-386252 STRING:P13712
PaxDb:P13712 PeptideAtlas:P13712 EnsemblFungi:YBR195C GeneID:852494
KEGG:sce:YBR195C CYGD:YBR195c OMA:MPDVTKT OrthoDB:EOG44TSHP
NextBio:971486 Genevestigator:P13712 GermOnline:YBR195C
Uniprot:P13712
Length = 422
Score = 239 (89.2 bits), Expect = 2.2e-20, Sum P(2) = 2.2e-20
Identities = 54/168 (32%), Positives = 90/168 (53%)
Query: 108 DVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILAT 167
DV W H+SLF + + + + D R+ S+ + H VN FN + ILA+
Sbjct: 256 DVTWMPTHDSLFAACTEGNAVSLLDLRTKKEKLQSNR-EKHDGGVNSCRFNYKNSLILAS 314
Query: 168 GSADKTVALWDLRNL-KLKLHSFESHKDEIFQVQWSPHNETILASSGT-DRRLHVWDLSK 225
++ + LWD+RN+ K + + E H + ++WSP+ +T+LA++G D + +WD S
Sbjct: 315 ADSNGRLNLWDIRNMNKSPIATME-HGTSVSTLEWSPNFDTVLATAGQEDGLVKLWDTS- 372
Query: 226 IGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
E E +F HGGH ++D SW+ ++PW++CSV+ DN
Sbjct: 373 ---------CE----ETIFTHGGHMLGVNDISWDAHDPWLMCSVANDN 407
Score = 152 (58.6 bits), Expect = 5.4e-10, Sum P(2) = 5.4e-10
Identities = 45/184 (24%), Positives = 89/184 (48%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWDTR--SHN---VSKPSHTVDAHTAEVNCLSFNPYSEY 163
+AW+L E+L S + ++ +WD + SH + P ++++ VN +++ P +
Sbjct: 206 LAWNLQQEALLLSSHSNGQVQVWDIKQYSHENPIIDLPLVSINSDGTAVNDVTWMPTHDS 265
Query: 164 ILATGSADKTVALWDLRNLKLKLHSF-ESHKDEIFQVQWSPHNETILASSGTDRRLHVWD 222
+ A + V+L DLR K KL S E H + +++ N ILAS+ ++ RL++WD
Sbjct: 266 LFAACTEGNAVSLLDLRTKKEKLQSNREKHDGGVNSCRFNYKNSLILASADSNGRLNLWD 325
Query: 223 LSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDST 282
+ + + P HG +S W+PN V+ + +++ + + D++
Sbjct: 326 IRNMNKS----------PIATMEHG---TSVSTLEWSPNFDTVLATAGQEDGLVKLWDTS 372
Query: 283 DSDT 286
+T
Sbjct: 373 CEET 376
Score = 129 (50.5 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 32/107 (29%), Positives = 54/107 (50%)
Query: 117 SLFGSVADDQ-KLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILAT-GSADKTV 174
SL + AD +L +WD R+ N S P T++ H V+ L ++P + +LAT G D V
Sbjct: 309 SLILASADSNGRLNLWDIRNMNKS-PIATME-HGTSVSTLEWSPNFDTVLATAGQEDGLV 366
Query: 175 ALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVW 221
LWD + + + + H + + W H+ ++ S D +H+W
Sbjct: 367 KLWDT-SCEETIFTHGGHMLGVNDISWDAHDPWLMCSVANDNSVHIW 412
Score = 62 (26.9 bits), Expect = 2.2e-20, Sum P(2) = 2.2e-20
Identities = 11/22 (50%), Positives = 13/22 (59%)
Query: 55 INEEYKIWKKNTPFLYDLVVNN 76
+ E Y WKKNT LYD + N
Sbjct: 19 LQERYSHWKKNTKLLYDYLNTN 40
>DICTYBASE|DDB_G0291566 [details] [associations]
symbol:grwd1 "glutamate-rich WD repeat-containing
protein 1" species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0291566 EMBL:AAFI02000177 GenomeReviews:CM000155_GR
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052
Pfam:PF12265 KO:K14848 OMA:NRLMMLR RefSeq:XP_635306.1
ProteinModelPortal:Q54ED4 STRING:Q54ED4 EnsemblProtists:DDB0267050
GeneID:8628250 KEGG:ddi:DDB_G0291566 ProtClustDB:CLSZ2732316
Uniprot:Q54ED4
Length = 482
Score = 263 (97.6 bits), Expect = 2.2e-20, P = 2.2e-20
Identities = 63/177 (35%), Positives = 96/177 (54%)
Query: 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYI 164
S +D+ W E +F S + DQ + IWD R KP+ TV AHTA+VN +S++ EY+
Sbjct: 298 SVEDIQWSPSEEKVFASCSIDQTVRIWDIRK---PKPAITVKAHTADVNVISWSRNVEYL 354
Query: 165 LATGSADKTVALWDLRNLK--LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWD 222
L +G D + +WDLR K + F+ H I ++W+P+ E+ + S +D ++ +WD
Sbjct: 355 LVSGCDDGSFRVWDLRAFKDNSPVSDFKYHTGPITSIEWNPYEESQVIVSSSDDQVTIWD 414
Query: 223 LS--KIGEEQSTEDA--EDG---PPELLFIHGGHTAKISDFSWNPNEPWVICSVSED 272
S + EE + +A +D PP+L FIH G I + W+P P V S S D
Sbjct: 415 FSLEEDTEEFTNANANPDDDFQYPPQLFFIHQGQH-DIKEVHWHPQIPHVAISTSID 470
Score = 154 (59.3 bits), Expect = 6.0e-08, P = 6.0e-08
Identities = 42/142 (29%), Positives = 69/142 (48%)
Query: 148 HTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNET 207
HT V + ++P E + A+ S D+TV +WD+R K + + ++H ++ + WS + E
Sbjct: 295 HTESVEDIQWSPSEEKVFASCSIDQTVRIWDIRKPKPAI-TVKAHTADVNVISWSRNVEY 353
Query: 208 ILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNP-NEPWVI 266
+L S D VWDL + D F + HT I+ WNP E VI
Sbjct: 354 LLVSGCDDGSFRVWDLRAFKDNSPVSD---------FKY--HTGPITSIEWNPYEESQVI 402
Query: 267 CSVSEDNI-MQEYCDSTDSDTK 287
S S+D + + ++ S + DT+
Sbjct: 403 VSSSDDQVTIWDF--SLEEDTE 422
Score = 146 (56.5 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 37/154 (24%), Positives = 72/154 (46%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
++A+ K + +T + + P HT+ H+ E L ++P LATG + ++ + +
Sbjct: 222 NIANHLKALDNETVAPKQTAPLHTISNHSIEGYALDWSPKIAGRLATGDCNNSIFVTNAS 281
Query: 181 NL--KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDG 238
K +F+ H + + +QWSP E + AS D+ + +WD+ K
Sbjct: 282 ESTWKTDTQAFKGHTESVEDIQWSPSEEKVFASCSIDQTVRIWDIRK------------- 328
Query: 239 PPELLFIHGGHTAKISDFSWNPNEPWVICSVSED 272
P + + HTA ++ SW+ N +++ S +D
Sbjct: 329 PKPAITVKA-HTADVNVISWSRNVEYLLVSGCDD 361
>ZFIN|ZDB-GENE-030131-9844 [details] [associations]
symbol:grwd1 "glutamate-rich WD repeat containing
1" species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-9844
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 GeneTree:ENSGT00550000075124
EMBL:CU459065 IPI:IPI00490298 Ensembl:ENSDART00000121998
ArrayExpress:F1QGP3 Bgee:F1QGP3 Uniprot:F1QGP3
Length = 452
Score = 255 (94.8 bits), Expect = 4.9e-20, Sum P(2) = 4.9e-20
Identities = 57/170 (33%), Positives = 93/170 (54%)
Query: 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYI 164
S +D+ W ++F S + DQ + IWD R+ S S +AH+++VN +S+N +I
Sbjct: 274 SVEDLQWSPTEATVFASCSVDQSIRIWDIRAPPNSMLSAN-EAHSSDVNVISWNRTEPFI 332
Query: 165 LATGSADKTVALWDLRNLKL--KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWD 222
L+ G D + +WDLR + + SF+ H + VQWSP + ++ A+SG D + WD
Sbjct: 333 LSGGD-DGLLKVWDLRQFQSGRPVASFKQHSAPVTSVQWSPVDSSVFAASGADDVISQWD 391
Query: 223 LSKIGEEQS--TEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVS 270
LS + ED + PP+LLF+H G ++ + W+P P V+ S +
Sbjct: 392 LSVESCDMGGQAEDVKQLPPQLLFLHQGQK-EVKELHWHPQIPGVLISTA 440
Score = 140 (54.3 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 36/161 (22%), Positives = 73/161 (45%)
Query: 126 QKLMIWDTRSHNVSK-PSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNL-K 183
+ + +W+ + K +H+ V L ++P + A+ S D+++ +WD+R
Sbjct: 248 KNIHVWEPQEGGTWKIDQRPFSSHSKSVEDLQWSPTEATVFASCSVDQSIRIWDIRAPPN 307
Query: 184 LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELL 243
L + E+H ++ + W+ E + S G D L VWDL + + G P
Sbjct: 308 SMLSANEAHSSDVNVISWN-RTEPFILSGGDDGLLKVWDLRQF---------QSGRPVAS 357
Query: 244 FIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDS 284
F H+A ++ W+P + V + D+++ ++ S +S
Sbjct: 358 FKQ--HSAPVTSVQWSPVDSSVFAASGADDVISQWDLSVES 396
Score = 135 (52.6 bits), Expect = 8.3e-06, Sum P(2) = 8.3e-06
Identities = 32/140 (22%), Positives = 64/140 (45%)
Query: 141 PSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRN---LKLKLHSFESHKDEIF 197
P + H +E + ++P + +G K + +W+ + K+ F SH +
Sbjct: 217 PLFSFAGHMSEGFAIDWSPKVPGRMVSGDCKKNIHVWEPQEGGTWKIDQRPFSSHSKSVE 276
Query: 198 QVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPE-LLFIHGGHTAKISDF 256
+QWSP T+ AS D+ + +WD+ PP +L + H++ ++
Sbjct: 277 DLQWSPTEATVFASCSVDQSIRIWDIR-------------APPNSMLSANEAHSSDVNVI 323
Query: 257 SWNPNEPWVICSVSEDNIMQ 276
SWN EP+++ S +D +++
Sbjct: 324 SWNRTEPFIL-SGGDDGLLK 342
Score = 41 (19.5 bits), Expect = 4.9e-20, Sum P(2) = 4.9e-20
Identities = 7/14 (50%), Positives = 8/14 (57%)
Query: 28 LPLSHSIYRFYRLC 41
L + HS YR Y C
Sbjct: 57 LEMDHSAYRMYHEC 70
>FB|FBgn0022288 [details] [associations]
symbol:l(2)09851 "lethal (2) 09851" species:7227 "Drosophila
melanogaster" [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE013599 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 GeneTree:ENSGT00550000075124
KO:K14848 OMA:NRLMMLR EMBL:AY071477 EMBL:AY128462
RefSeq:NP_610182.3 UniGene:Dm.1493 UniGene:Dm.36762 SMR:Q8SYL1
IntAct:Q8SYL1 STRING:Q8SYL1 EnsemblMetazoa:FBtr0086043 GeneID:46662
KEGG:dme:Dmel_CG12792 UCSC:CG12792-RA FlyBase:FBgn0022288
InParanoid:Q8SYL1 OrthoDB:EOG441NSN GenomeRNAi:46662 NextBio:838859
Uniprot:Q8SYL1
Length = 456
Score = 254 (94.5 bits), Expect = 2.1e-19, P = 2.1e-19
Identities = 60/176 (34%), Positives = 98/176 (55%)
Query: 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTV-DAHTAEVNCLSFNPYSEY 163
S +D+ W S+ S + D+ + IWD R+ T DAH ++VN +S+N +E
Sbjct: 271 SVEDLQWSPNERSVLASCSVDKTIRIWDCRASPQKACMLTCEDAHQSDVNVISWNR-NEP 329
Query: 164 ILATGSADKTVALWDLRNLKLK--LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVW 221
+A+G D + +WDLR + K + +F+ H D I V+WSP T+LAS G D ++ +W
Sbjct: 330 FIASGGDDGYLHIWDLRQFQSKKPIATFKHHTDHITTVEWSPAEATVLASGGDDDQIALW 389
Query: 222 DLSKIGE-EQSTEDAEDG------PPELLFIHGGHTAKISDFSWNPNEPWVICSVS 270
DL+ + +Q+ + A++ PP+LLFIH G +I + W+P P V+ S +
Sbjct: 390 DLAVEKDIDQAVDPAQNEDVLNKLPPQLLFIHQGQK-EIKELHWHPQLPGVLLSTA 444
Score = 163 (62.4 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 42/129 (32%), Positives = 65/129 (50%)
Query: 148 HTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLK---LHSFESHKDEIFQVQWSPH 204
H+ V L ++P +LA+ S DKT+ +WD R K L ++H+ ++ + W+
Sbjct: 268 HSQSVEDLQWSPNERSVLASCSVDKTIRIWDCRASPQKACMLTCEDAHQSDVNVISWN-R 326
Query: 205 NETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 264
NE +AS G D LH+WDL + QS + P F H HT I+ W+P E
Sbjct: 327 NEPFIASGGDDGYLHIWDLRQF---QSKK------PIATFKH--HTDHITTVEWSPAEAT 375
Query: 265 VICSVSEDN 273
V+ S +D+
Sbjct: 376 VLASGGDDD 384
Score = 145 (56.1 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 34/140 (24%), Positives = 63/140 (45%)
Query: 139 SKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALW---DLRNLKLKLHSFESHKDE 195
++P T H E + ++P ++ +LATG + + +W + K+ H
Sbjct: 212 ARPVFTFGGHQQEGFAIDWSPSADGVLATGDCRRDIHVWTPVEDGTWKVDQRPLAGHSQS 271
Query: 196 IFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISD 255
+ +QWSP+ ++LAS D+ + +WD ++ ED H + ++
Sbjct: 272 VEDLQWSPNERSVLASCSVDKTIRIWDCRASPQKACMLTCEDA----------HQSDVNV 321
Query: 256 FSWNPNEPWVICSVSEDNIM 275
SWN NEP+ I S +D +
Sbjct: 322 ISWNRNEPF-IASGGDDGYL 340
Score = 117 (46.2 bits), Expect = 0.00068, P = 0.00067
Identities = 31/104 (29%), Positives = 48/104 (46%)
Query: 188 SFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHG 247
+F H+ E F + WSP + +LA+ R +HVW + + E T + P
Sbjct: 217 TFGGHQQEGFAIDWSPSADGVLATGDCRRDIHVW--TPV--EDGTWKVDQRPL------A 266
Query: 248 GHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRL 291
GH+ + D W+PNE V+ S S D ++ + D S K L
Sbjct: 267 GHSQSVEDLQWSPNERSVLASCSVDKTIRIW-DCRASPQKACML 309
>POMBASE|SPBC1711.07 [details] [associations]
symbol:SPBC1711.07 "WD repeat protein Rrb1 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0005829
"cytosol" evidence=IDA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=ISS] [GO:0043234
"protein complex" evidence=NAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC1711.07 GO:GO:0005829
GO:GO:0043234 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319
GenomeReviews:CU329671_GR GO:GO:0042254 GO:GO:0006364
InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000036730 KO:K14848
OMA:NRLMMLR RefSeq:NP_595880.1 ProteinModelPortal:Q9P783
STRING:Q9P783 EnsemblFungi:SPBC1711.07.1 GeneID:2539693
KEGG:spo:SPBC1711.07 OrthoDB:EOG4XWK6B NextBio:20800846
Uniprot:Q9P783
Length = 480
Score = 252 (93.8 bits), Expect = 4.5e-19, P = 4.5e-19
Identities = 65/195 (33%), Positives = 106/195 (54%)
Query: 97 TQNFPFPLSR----QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSH-TVDAHTA- 150
T + PF LS +D+ W +++F S + D IWD R N K S TV+AH
Sbjct: 282 TDSSPF-LSHTAAVEDLQWSPSEKNVFSSCSCDGTFRIWDVR--NKQKTSALTVNAHPGV 338
Query: 151 EVNCLSFNPYSEYILATGSADKTVALWDLRNLKLK------LHSFESHKDEIFQVQWSPH 204
+VN LS+N +LATG+ + ++WDLR+LK + SF+ H+ I+ ++W P+
Sbjct: 339 DVNVLSWNTRVPNLLATGADNGVWSVWDLRSLKSSSSVATPVASFKWHRAPIYSIEWHPN 398
Query: 205 NETILASSGTDRRLHVWDLS-KIGEEQ----STEDAEDGPPELLFIHGGHTAKISDFSWN 259
++++ G D ++ +WDLS ++ EE+ + E +D PP+L+FIH G +I + W+
Sbjct: 399 EDSVIGVVGADNQISLWDLSVELDEEEQDSRAAEGLQDVPPQLMFIHMGQQ-EIKEMHWH 457
Query: 260 PNEPWVICSVSEDNI 274
P I S + I
Sbjct: 458 RQIPGTIVSTAMTGI 472
Score = 118 (46.6 bits), Expect = 0.00057, P = 0.00057
Identities = 43/174 (24%), Positives = 73/174 (41%)
Query: 116 ESLFGSVADDQKLMIWDTRSH---------NVSK----PSHTVDAHTAEVNCLSFNPYSE 162
ESL S + K+ IWD H VS+ P +TV+ H E L ++P+ E
Sbjct: 200 ESLLASFHETGKVHIWDIAPHLRSLDSPGVMVSRKENSPLYTVNRHKTEGYALDWSPF-E 258
Query: 163 YILATGSADKTVALWDLRNLKLKLHS--FESHKDEIFQVQWSPHNETILASSGTDRRLHV 220
Y L +G + L N + S F SH + +QWSP + + +S D +
Sbjct: 259 YSLLSGDNANEIFLTKYSNGGWQTDSSPFLSHTAAVEDLQWSPSEKNVFSSCSCDGTFRI 318
Query: 221 WDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 274
WD + +Q T L ++ ++ SWN P ++ + +++ +
Sbjct: 319 WD---VRNKQKTS--------ALTVNAHPGVDVNVLSWNTRVPNLLATGADNGV 361
>TAIR|locus:2050388 [details] [associations]
symbol:AT2G19540 "AT2G19540" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319 EMBL:AC005917
InterPro:IPR022052 Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000036730
KO:K14848 OMA:NRLMMLR UniGene:At.24966 EMBL:AF370506 EMBL:AY128814
IPI:IPI00526267 PIR:A84578 RefSeq:NP_179544.1
ProteinModelPortal:Q9ZUN8 SMR:Q9ZUN8 STRING:Q9ZUN8 PaxDb:Q9ZUN8
PRIDE:Q9ZUN8 EnsemblPlants:AT2G19540.1 GeneID:816473
KEGG:ath:AT2G19540 TAIR:At2g19540 InParanoid:Q9ZUN8
PhylomeDB:Q9ZUN8 ProtClustDB:CLSN2683177 ArrayExpress:Q9ZUN8
Genevestigator:Q9ZUN8 Uniprot:Q9ZUN8
Length = 469
Score = 250 (93.1 bits), Expect = 7.1e-19, P = 7.1e-19
Identities = 65/191 (34%), Positives = 102/191 (53%)
Query: 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYI 164
S +D+ W E++F S + D + +WD R P+ + AH A+VN +S+N + +
Sbjct: 271 SVEDLQWSPAEENVFASCSVDGSVAVWDIRLGK--SPALSFKAHNADVNVISWNRLASCM 328
Query: 165 LATGSADKTVALWDLRNLK----LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHV 220
LA+GS D T ++ DLR +K + H FE HK I ++WS H + LA + D +L +
Sbjct: 329 LASGSDDGTFSIRDLRLIKGGDAVVAH-FEYHKHPITSIEWSAHEASTLAVTSGDNQLTI 387
Query: 221 WDLS--KIGEEQSTEDAE---------DGPPELLFIHGGHTAKISDFSWNPNEPWVICSV 269
WDLS K EE++ +A+ D PP+LLF+H G + + W+ P +I S
Sbjct: 388 WDLSLEKDEEEEAEFNAQTKELVNTPQDLPPQLLFVHQGQK-DLKELHWHNQIPGMIIST 446
Query: 270 SED--NIMQEY 278
+ D NI+ Y
Sbjct: 447 AGDGFNILMPY 457
Score = 128 (50.1 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 43/166 (25%), Positives = 72/166 (43%)
Query: 122 VADDQKLMI--WDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDL 179
++ D K MI W+ S + + HTA V L ++P E + A+ S D +VA+WD+
Sbjct: 240 LSGDCKSMIHLWEPASGSWAVDPIPFAGHTASVEDLQWSPAEENVFASCSVDGSVAVWDI 299
Query: 180 RNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGP 239
R K SF++H ++ + W+ +LAS D + DL I G
Sbjct: 300 RLGKSPALSFKAHNADVNVISWNRLASCMLASGSDDGTFSIRDLRLI----------KGG 349
Query: 240 PELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSD 285
++ H I+ W+ +E + S DN + + S + D
Sbjct: 350 DAVVAHFEYHKHPITSIEWSAHEASTLAVTSGDNQLTIWDLSLEKD 395
>CGD|CAL0005992 [details] [associations]
symbol:orf19.3581 species:5476 "Candida albicans" [GO:0042393
"histone binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0006335
"DNA replication-dependent nucleosome assembly" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0005992 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 EMBL:AACQ01000094
EMBL:AACQ01000093 InterPro:IPR022052 Pfam:PF12265
HOGENOM:HOG000160330 RefSeq:XP_714940.1 RefSeq:XP_715003.1
ProteinModelPortal:Q59ZD9 STRING:Q59ZD9 GeneID:3643390
GeneID:3643420 KEGG:cal:CaO19.11065 KEGG:cal:CaO19.3581
Uniprot:Q59ZD9
Length = 435
Score = 235 (87.8 bits), Expect = 3.1e-17, P = 3.1e-17
Identities = 51/166 (30%), Positives = 86/166 (51%)
Query: 108 DVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILAT 167
D+ W H+SLF + D+ L ++DTR+ + + + + VN ++ NP LAT
Sbjct: 271 DIEWFPTHDSLFCTADDNGWLKLYDTRNQSAAVQNANIGN---SVNSVACNPGYATGLAT 327
Query: 168 GSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIG 227
G ++ + +WD+RN L H D + Q++W+P IL SS +D + + D+S
Sbjct: 328 GDSNGVIKMWDIRNFDNSLSELHGHSDSVTQLKWNPKCHNILGSSSSDHSVKLHDMSN-- 385
Query: 228 EEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
ST +F H GH ++DF W+ +PW++ SV++DN
Sbjct: 386 --DST----------IFTHLGHMLGVNDFDWSYADPWMVASVADDN 419
Score = 102 (41.0 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 42/142 (29%), Positives = 65/142 (45%)
Query: 47 DDAVEERVINEE----YKIWKKNTPFLYDLVVNNYVANISCILNISILFF-EIIFTQNFP 101
D VEE I+E+ Y++WKKN P LYD +V N + S +S+ FF +I +
Sbjct: 27 DTPVEESAIDEKTQQNYRVWKKNAPLLYDYLVTNSLLWPS----LSVQFFPDITHINDLG 82
Query: 102 FPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPY- 160
+ + + + L G+ Q + D S + PS ++N L FNP
Sbjct: 83 ENKNEEQI---IAQRILLGTFTLGQAI---DHISI-LQIPSFKNLNQNIKINKLDFNPER 135
Query: 161 SEYILATGSADKTVALWDLRNL 182
E+ L T S +KT L + +L
Sbjct: 136 EEFELTTPSLNKTKTLQKINHL 157
Score = 67 (28.6 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 18/102 (17%), Positives = 49/102 (48%)
Query: 178 DLRNLKLKL-HSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAE 236
DL ++++L + +IF + W+ ++E +L S+ + ++++DL K E ++ +++
Sbjct: 202 DLSKVQVRLVNKHIPSTTDIFAIDWNRNSEGLLLSADMNGLVNLYDLKKY-ESETLNESQ 260
Query: 237 DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEY 278
+ ++D W P + C+ ++ ++ Y
Sbjct: 261 --------YWENNAIGVNDIEWFPTHDSLFCTADDNGWLKLY 294
>FB|FBgn0032341 [details] [associations]
symbol:Reps species:7227 "Drosophila melanogaster"
[GO:0005515 "protein binding" evidence=IPI] [GO:0006898
"receptor-mediated endocytosis" evidence=IEA] [GO:0005509 "calcium
ion binding" evidence=IEA] InterPro:IPR000261 InterPro:IPR002048
InterPro:IPR011992 InterPro:IPR026814 PROSITE:PS50031
PROSITE:PS50222 SMART:SM00027 GO:GO:0006898 EMBL:AE014134
GO:GO:0005509 Gene3D:1.10.238.10 HSSP:O54916 eggNOG:NOG313227
PANTHER:PTHR11216:SF33 GeneTree:ENSGT00530000063792 EMBL:AY128416
RefSeq:NP_609487.2 UniGene:Dm.7219 SMR:Q8MQS4 MINT:MINT-951593
STRING:Q8MQS4 EnsemblMetazoa:FBtr0080230 GeneID:34542
KEGG:dme:Dmel_CG6192 UCSC:CG6192-RA CTD:34542 FlyBase:FBgn0032341
InParanoid:Q8MQS4 OMA:NSVAERP OrthoDB:EOG4M0CJF GenomeRNAi:34542
NextBio:788979 Uniprot:Q8MQS4
Length = 907
Score = 244 (91.0 bits), Expect = 4.5e-17, Sum P(2) = 4.5e-17
Identities = 54/98 (55%), Positives = 67/98 (68%)
Query: 328 WQGLVLFDILVCEEQRQLLGTEEESSDRHSSDNDTED--LNSIWSMTDEQREYYKTQFHN 385
W L+ L+ +E RQLLGTEEESSDRHSSD+D + L +I+ +T EQREYY QF
Sbjct: 217 WAQDTLWQGLLGDEHRQLLGTEEESSDRHSSDDDDNESELVTIYQITPEQREYYNKQFRT 276
Query: 386 LQRHKSVSDPSYHLISGQVARKFFENSKLPVTELRKIW 423
+QR DP + L+SGQ AR FFE S++PV ELR IW
Sbjct: 277 VQR-----DP-HGLLSGQAARNFFEKSRIPVEELRHIW 308
Score = 39 (18.8 bits), Expect = 4.5e-17, Sum P(2) = 4.5e-17
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 3 ISIQALTS-PKLLLHLSQNAFFTWSALPLSH 32
I I L P LH+S+ F++ L +H
Sbjct: 48 IEITGLAGIPSTALHISRTQFYSCLKLIAAH 78
>GENEDB_PFALCIPARUM|PF13_0149 [details] [associations]
symbol:PF13_0149 "chromatin assembly factor 1
subunit, putative" species:5833 "Plasmodium falciparum" [GO:0006333
"chromatin assembly or disassembly" evidence=ISS] [GO:0051082
"unfolded protein binding" evidence=ISS] [GO:0042393 "histone
binding" evidence=ISS] [GO:0003682 "chromatin binding"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0051082 GO:GO:0003682 GO:GO:0006333
GO:GO:0042393 GO:GO:0005678 EMBL:AL844509 KO:K10752
InterPro:IPR022052 Pfam:PF12265 OMA:EVNYLSF RefSeq:XP_001350006.1
ProteinModelPortal:Q8IE52 EnsemblProtists:PF13_0149:mRNA
GeneID:814119 KEGG:pfa:PF13_0149 EuPathDB:PlasmoDB:PF3D7_1329300
HOGENOM:HOG000283238 ProtClustDB:CLSZ2500737 Uniprot:Q8IE52
Length = 582
Score = 207 (77.9 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 54/178 (30%), Positives = 85/178 (47%)
Query: 108 DVAWHLLHESLFGSVADDQKLM-IWDTRSHNV-SKPSHTVDAHTAEVNCLSFNPYSEYIL 165
D+ +H + G V DD M I+D R N +K + + +N SF+ +SEYI
Sbjct: 392 DIFFHPKFSNALG-VCDDNGYMSIYDIRKKNFFTKAEICFNDYNEPMNTFSFDNFSEYIF 450
Query: 166 ATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 225
+ G +D +++WD+R K L + H I ++++ + I AS D +WD+S+
Sbjct: 451 SCGYSDGLISVWDMRYNKESLLKLKYHTQGINRIKFGMISSGIFASCSDDGTACIWDISR 510
Query: 226 IGEEQ-----STED-----AEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
Q TED P +LLF+HGGH I D +W + + I +V DN
Sbjct: 511 NNNTQILPLQKTEDDIYNNPNPVPKQLLFVHGGHIGSIYDLAWANSNTFTIATVGVDN 568
Score = 70 (29.7 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 45 PFDDAVEER----VINEEYKIWKKNTPFLYDLVVNN 76
P ++ V E + NE + IW+KNTPFLY ++ +
Sbjct: 23 PIENEVTENNYVDIQNERHIIWRKNTPFLYSSLLKH 58
>UNIPROTKB|Q8IE52 [details] [associations]
symbol:PF13_0149 "Chromatin assembly factor 1 subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0003682
"chromatin binding" evidence=ISS] [GO:0006333 "chromatin assembly
or disassembly" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0051082 "unfolded protein binding" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0051082 GO:GO:0003682 GO:GO:0006333
GO:GO:0042393 GO:GO:0005678 EMBL:AL844509 KO:K10752
InterPro:IPR022052 Pfam:PF12265 OMA:EVNYLSF RefSeq:XP_001350006.1
ProteinModelPortal:Q8IE52 EnsemblProtists:PF13_0149:mRNA
GeneID:814119 KEGG:pfa:PF13_0149 EuPathDB:PlasmoDB:PF3D7_1329300
HOGENOM:HOG000283238 ProtClustDB:CLSZ2500737 Uniprot:Q8IE52
Length = 582
Score = 207 (77.9 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 54/178 (30%), Positives = 85/178 (47%)
Query: 108 DVAWHLLHESLFGSVADDQKLM-IWDTRSHNV-SKPSHTVDAHTAEVNCLSFNPYSEYIL 165
D+ +H + G V DD M I+D R N +K + + +N SF+ +SEYI
Sbjct: 392 DIFFHPKFSNALG-VCDDNGYMSIYDIRKKNFFTKAEICFNDYNEPMNTFSFDNFSEYIF 450
Query: 166 ATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 225
+ G +D +++WD+R K L + H I ++++ + I AS D +WD+S+
Sbjct: 451 SCGYSDGLISVWDMRYNKESLLKLKYHTQGINRIKFGMISSGIFASCSDDGTACIWDISR 510
Query: 226 IGEEQ-----STED-----AEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
Q TED P +LLF+HGGH I D +W + + I +V DN
Sbjct: 511 NNNTQILPLQKTEDDIYNNPNPVPKQLLFVHGGHIGSIYDLAWANSNTFTIATVGVDN 568
Score = 70 (29.7 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 45 PFDDAVEER----VINEEYKIWKKNTPFLYDLVVNN 76
P ++ V E + NE + IW+KNTPFLY ++ +
Sbjct: 23 PIENEVTENNYVDIQNERHIIWRKNTPFLYSSLLKH 58
>UNIPROTKB|E2RBY0 [details] [associations]
symbol:GRWD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
CTD:83743 GeneTree:ENSGT00550000075124 KO:K14848 OMA:NRLMMLR
EMBL:AAEX03000823 RefSeq:XP_854878.1 ProteinModelPortal:E2RBY0
Ensembl:ENSCAFT00000006420 GeneID:612058 KEGG:cfa:612058
NextBio:20897592 Uniprot:E2RBY0
Length = 440
Score = 229 (85.7 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 52/175 (29%), Positives = 91/175 (52%)
Query: 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSH--TVDAHTAEVNCLSFNPYSE 162
S +D+ W +++F S + D + IWD R+ SK T AH +VN ++++
Sbjct: 257 SVEDLQWSPTEDTVFASCSADASIRIWDIRAAP-SKACMLTTTSAHDGDVNVINWSRREP 315
Query: 163 YILATGSADKTVALWDLRNLKL--KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHV 220
++L+ G D + +WDLR K + +F+ H I V+W P + + A+SG D ++
Sbjct: 316 FLLSGGD-DGALKIWDLRQFKSGSPVATFKQHVAPITSVEWHPQDSGVFAASGADNQITQ 374
Query: 221 WDLS-----KIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVS 270
WDL+ + G+ ++ D P +LLF+H G T + + W+P P V+ S +
Sbjct: 375 WDLAVERDPEAGDTETDPGLADLPQQLLFVHQGET-DLKELHWHPQCPGVLVSTA 428
Score = 145 (56.1 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 38/141 (26%), Positives = 64/141 (45%)
Query: 148 HTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLK---LHSFESHKDEIFQVQWSPH 204
HT V L ++P + + A+ SAD ++ +WD+R K L + +H ++ + WS
Sbjct: 254 HTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPSKACMLTTTSAHDGDVNVINWS-R 312
Query: 205 NETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 264
E L S G D L +WDL + + G P F H A I+ W+P +
Sbjct: 313 REPFLLSGGDDGALKIWDLRQF---------KSGSPVATFKQ--HVAPITSVEWHPQDSG 361
Query: 265 VICSVSEDNIMQEYCDSTDSD 285
V + DN + ++ + + D
Sbjct: 362 VFAASGADNQITQWDLAVERD 382
Score = 127 (49.8 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 38/159 (23%), Positives = 63/159 (39%)
Query: 122 VADDQKLMIWDTRSHNVS-KPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALW--- 177
V DD + + R KP T H E L ++P L TG K + LW
Sbjct: 180 VVDDPQALATFLRDEQARVKPIFTFAGHMGEGFALDWSPRVSGRLLTGDCQKNIHLWTPT 239
Query: 178 DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAED 237
D + + F H + +QWSP +T+ AS D + +WD+ A
Sbjct: 240 DGGSWHVDQRPFMGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIR----------AAP 289
Query: 238 GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276
+L H ++ +W+ EP+++ S +D ++
Sbjct: 290 SKACMLTTTSAHDGDVNVINWSRREPFLL-SGGDDGALK 327
>RGD|1310649 [details] [associations]
symbol:Grwd1 "glutamate-rich WD repeat containing 1"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310649 GO:GO:0005737
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 CTD:83743 HOGENOM:HOG000036730
HOVERGEN:HBG051847 KO:K14848 OrthoDB:EOG4CG084 EMBL:BC083883
IPI:IPI00367307 RefSeq:NP_001012067.1 UniGene:Rn.33523
ProteinModelPortal:Q5XI13 STRING:Q5XI13 PRIDE:Q5XI13 GeneID:308592
KEGG:rno:308592 UCSC:RGD:1310649 NextBio:659230 ArrayExpress:Q5XI13
Genevestigator:Q5XI13 GermOnline:ENSRNOG00000021058 Uniprot:Q5XI13
Length = 445
Score = 229 (85.7 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 53/174 (30%), Positives = 91/174 (52%)
Query: 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTRSH-NVSKPSHTVDAHTAEVNCLSFNPYSEY 163
S +D+ W +++F S + D + IWD R+ + T AH +VN +S++ +
Sbjct: 262 SVEDLQWSPTEDTVFASCSADASIRIWDIRAAPGKACMLTTAAAHDGDVNVISWSRREPF 321
Query: 164 ILATGSADKTVALWDLRNLKL--KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVW 221
+L+ G D T+ +WDLR K + +F+ H + V+W P + + A+SG D ++ W
Sbjct: 322 LLSGGD-DGTLKVWDLRQFKSGSPVATFKQHVAPVTSVEWHPQDSGVFAASGADNQITQW 380
Query: 222 DLSKIGEEQSTEDAED-G----PPELLFIHGGHTAKISDFSWNPNEPWVICSVS 270
DL+ + +S E D G P +LLF+H G T + + W+P P V+ S +
Sbjct: 381 DLAVERDPESGETETDPGLAALPQQLLFVHQGET-DLKELHWHPQCPGVLISTA 433
Score = 147 (56.8 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 46/172 (26%), Positives = 77/172 (44%)
Query: 124 DDQK-LMIW---DTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDL 179
D QK + +W D S NV + HT V L ++P + + A+ SAD ++ +WD+
Sbjct: 233 DCQKNIHLWTPTDGGSWNVDQRPFV--GHTRSVEDLQWSPTEDTVFASCSADASIRIWDI 290
Query: 180 RNLKLK---LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAE 236
R K L + +H ++ + WS E L S G D L VWDL + +
Sbjct: 291 RAAPGKACMLTTAAAHDGDVNVISWS-RREPFLLSGGDDGTLKVWDLRQF---------K 340
Query: 237 DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKT 288
G P F H A ++ W+P + V + DN + ++ + + D ++
Sbjct: 341 SGSPVATFKQ--HVAPVTSVEWHPQDSGVFAASGADNQITQWDLAVERDPES 390
Score = 132 (51.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 40/158 (25%), Positives = 64/158 (40%)
Query: 122 VADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALW---D 178
V D Q L I+ KP + H E L ++P L TG K + LW D
Sbjct: 186 VDDPQALAIFLRDEQARVKPIFSFAGHMGEGFALDWSPRVPGRLLTGDCQKNIHLWTPTD 245
Query: 179 LRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDG 238
+ + F H + +QWSP +T+ AS D + +WD+ A G
Sbjct: 246 GGSWNVDQRPFVGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIR----------AAPG 295
Query: 239 PPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276
+L H ++ SW+ EP+++ S +D ++
Sbjct: 296 KACMLTTAAAHDGDVNVISWSRREPFLL-SGGDDGTLK 332
>UNIPROTKB|Q1JQD2 [details] [associations]
symbol:GRWD1 "Glutamate-rich WD repeat-containing protein
1" species:9913 "Bos taurus" [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 EMBL:BC116037 IPI:IPI00715008
RefSeq:NP_001069707.1 UniGene:Bt.3201 ProteinModelPortal:Q1JQD2
STRING:Q1JQD2 Ensembl:ENSBTAT00000000088 GeneID:540739
KEGG:bta:540739 CTD:83743 GeneTree:ENSGT00550000075124
HOGENOM:HOG000036730 HOVERGEN:HBG051847 InParanoid:Q1JQD2 KO:K14848
OMA:NRLMMLR OrthoDB:EOG4CG084 NextBio:20878807 Uniprot:Q1JQD2
Length = 446
Score = 228 (85.3 bits), Expect = 2.2e-16, P = 2.2e-16
Identities = 52/175 (29%), Positives = 91/175 (52%)
Query: 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSH--TVDAHTAEVNCLSFNPYSE 162
S +D+ W +++F S + D + IWD R+ SK T AH +VN ++++ + E
Sbjct: 263 SVEDLQWSPTEDTVFASCSADASIRIWDIRAAP-SKACMLTTATAHDGDVNVINWS-HRE 320
Query: 163 YILATGSADKTVALWDLRNLKL--KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHV 220
L +G D + +WDLR K + +F+ H + V+W P + + A+SG D ++
Sbjct: 321 PFLLSGGDDGALKVWDLRQFKSGSPVATFKQHVAPVTSVEWHPQDSGVFAASGADNQITQ 380
Query: 221 WDLS-----KIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVS 270
WDL+ + G+ ++ D P +LLF+H G T + + W+P P V+ S +
Sbjct: 381 WDLAVERDPEAGDAETDPGLADLPQQLLFVHQGET-DLKELHWHPQCPGVLVSTA 434
Score = 152 (58.6 bits), Expect = 8.6e-08, P = 8.6e-08
Identities = 39/141 (27%), Positives = 65/141 (46%)
Query: 148 HTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLK---LHSFESHKDEIFQVQWSPH 204
HT V L ++P + + A+ SAD ++ +WD+R K L + +H ++ + WS H
Sbjct: 260 HTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPSKACMLTTATAHDGDVNVINWS-H 318
Query: 205 NETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 264
E L S G D L VWDL + + G P F H A ++ W+P +
Sbjct: 319 REPFLLSGGDDGALKVWDLRQF---------KSGSPVATFKQ--HVAPVTSVEWHPQDSG 367
Query: 265 VICSVSEDNIMQEYCDSTDSD 285
V + DN + ++ + + D
Sbjct: 368 VFAASGADNQITQWDLAVERD 388
Score = 121 (47.7 bits), Expect = 0.00024, P = 0.00024
Identities = 37/159 (23%), Positives = 62/159 (38%)
Query: 122 VADDQKLMIWDTRSHNVS-KPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALW--- 177
V DD + + R KP H E L ++P L TG K + LW
Sbjct: 186 VVDDPQALATFLRDEQTRMKPIFAFSGHMGEGFALDWSPRVPGRLLTGDCQKNIHLWTPT 245
Query: 178 DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAED 237
D + + F H + +QWSP +T+ AS D + +WD+ A
Sbjct: 246 DGGSWHVDQRPFVGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIR----------AAP 295
Query: 238 GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276
+L H ++ +W+ EP+++ S +D ++
Sbjct: 296 SKACMLTTATAHDGDVNVINWSHREPFLL-SGGDDGALK 333
>MGI|MGI:2141989 [details] [associations]
symbol:Grwd1 "glutamate-rich WD repeat containing 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:2141989 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 EMBL:AC149053 CTD:83743
GeneTree:ENSGT00550000075124 HOGENOM:HOG000036730
HOVERGEN:HBG051847 KO:K14848 OMA:NRLMMLR EMBL:AB001539
EMBL:CH466603 EMBL:BC008121 IPI:IPI00123005 RefSeq:NP_700468.2
UniGene:Mm.274847 ProteinModelPortal:Q810D6 STRING:Q810D6
PhosphoSite:Q810D6 PaxDb:Q810D6 PRIDE:Q810D6
Ensembl:ENSMUST00000107723 Ensembl:ENSMUST00000131384 GeneID:101612
KEGG:mmu:101612 InParanoid:Q810D6 NextBio:355042 CleanEx:MM_GRWD1
Genevestigator:Q810D6 GermOnline:ENSMUSG00000053801 Uniprot:Q810D6
Length = 446
Score = 226 (84.6 bits), Expect = 3.8e-16, P = 3.8e-16
Identities = 52/174 (29%), Positives = 90/174 (51%)
Query: 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTRSH-NVSKPSHTVDAHTAEVNCLSFNPYSEY 163
S +D+ W +++F S + D + IWD R+ + T AH +VN +S++ +
Sbjct: 263 SVEDLQWSPTEDTVFASCSADASIRIWDIRAAPGKACMLTTATAHDGDVNVISWSRREPF 322
Query: 164 ILATGSADKTVALWDLRNLKL--KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVW 221
+L+ G D + +WDLR K + +F+ H + V+W P + + A+SG D ++ W
Sbjct: 323 LLSGGD-DGALKVWDLRQFKSGSPVATFKQHMAPVTSVEWHPQDSGVFAASGADNQITQW 381
Query: 222 DLSKIGEEQSTEDAED-G----PPELLFIHGGHTAKISDFSWNPNEPWVICSVS 270
DL+ + +S E D G P +LLF+H G T + + W+P P V+ S +
Sbjct: 382 DLAVERDPESGETETDPGLAALPQQLLFVHQGET-DLKELHWHPQCPGVLISTA 434
Score = 142 (55.0 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 38/144 (26%), Positives = 66/144 (45%)
Query: 148 HTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLK---LHSFESHKDEIFQVQWSPH 204
HT V L ++P + + A+ SAD ++ +WD+R K L + +H ++ + WS
Sbjct: 260 HTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPGKACMLTTATAHDGDVNVISWS-R 318
Query: 205 NETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 264
E L S G D L VWDL + + G P F H A ++ W+P +
Sbjct: 319 REPFLLSGGDDGALKVWDLRQF---------KSGSPVATFKQ--HMAPVTSVEWHPQDSG 367
Query: 265 VICSVSEDNIMQEYCDSTDSDTKT 288
V + DN + ++ + + D ++
Sbjct: 368 VFAASGADNQITQWDLAVERDPES 391
Score = 127 (49.8 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 40/158 (25%), Positives = 64/158 (40%)
Query: 122 VADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALW---D 178
V D Q L I+ KP + H E L ++P L TG K V LW +
Sbjct: 187 VDDPQALAIFLRDEQARIKPIFSFAGHMGEGFALDWSPRVPGRLLTGDCQKNVHLWTPTE 246
Query: 179 LRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDG 238
+ + F H + +QWSP +T+ AS D + +WD+ A G
Sbjct: 247 GGSWNVDQRPFVGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIR----------AAPG 296
Query: 239 PPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276
+L H ++ SW+ EP+++ S +D ++
Sbjct: 297 KACMLTTATAHDGDVNVISWSRREPFLL-SGGDDGALK 333
>UNIPROTKB|Q9BQ67 [details] [associations]
symbol:GRWD1 "Glutamate-rich WD repeat-containing protein
1" species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
CTD:83743 HOGENOM:HOG000036730 HOVERGEN:HBG051847 KO:K14848
OMA:NRLMMLR OrthoDB:EOG4CG084 EMBL:AF337808 EMBL:BC002440
EMBL:AB075822 IPI:IPI00027831 RefSeq:NP_113673.3 UniGene:Hs.400625
ProteinModelPortal:Q9BQ67 SMR:Q9BQ67 IntAct:Q9BQ67
MINT:MINT-1148872 STRING:Q9BQ67 PhosphoSite:Q9BQ67 DMDM:18202731
SWISS-2DPAGE:Q9BQ67 PaxDb:Q9BQ67 PeptideAtlas:Q9BQ67 PRIDE:Q9BQ67
DNASU:83743 Ensembl:ENST00000253237 GeneID:83743 KEGG:hsa:83743
UCSC:uc002pjd.2 GeneCards:GC19P048949 H-InvDB:HIX0080107
HGNC:HGNC:21270 HPA:HPA042643 MIM:610597 neXtProt:NX_Q9BQ67
PharmGKB:PA134897548 InParanoid:Q9BQ67 PhylomeDB:Q9BQ67
GenomeRNAi:83743 NextBio:72761 ArrayExpress:Q9BQ67 Bgee:Q9BQ67
CleanEx:HS_GRWD1 Genevestigator:Q9BQ67 GermOnline:ENSG00000105447
Uniprot:Q9BQ67
Length = 446
Score = 226 (84.6 bits), Expect = 3.8e-16, P = 3.8e-16
Identities = 51/175 (29%), Positives = 91/175 (52%)
Query: 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSH--TVDAHTAEVNCLSFNPYSE 162
S +D+ W ++F S + D + IWD R+ SK T AH +VN +S++
Sbjct: 263 SVEDLQWSPTENTVFASCSADASIRIWDIRAAP-SKACMLTTATAHDGDVNVISWSRREP 321
Query: 163 YILATGSADKTVALWDLRNLKL--KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHV 220
++L+ G D + +WDLR K + +F+ H + V+W P + + A+SG D ++
Sbjct: 322 FLLSGGD-DGALKIWDLRQFKSGSPVATFKQHVAPVTSVEWHPQDSGVFAASGADHQITQ 380
Query: 221 WDLS-----KIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVS 270
WDL+ + G+ ++ D P +LLF+H G T ++ + W+P P ++ S +
Sbjct: 381 WDLAVERDPEAGDVEADPGLADLPQQLLFVHQGET-ELKELHWHPQCPGLLVSTA 434
Score = 136 (52.9 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 36/141 (25%), Positives = 63/141 (44%)
Query: 148 HTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLK---LHSFESHKDEIFQVQWSPH 204
HT V L ++P + A+ SAD ++ +WD+R K L + +H ++ + WS
Sbjct: 260 HTRSVEDLQWSPTENTVFASCSADASIRIWDIRAAPSKACMLTTATAHDGDVNVISWS-R 318
Query: 205 NETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 264
E L S G D L +WDL + + G P F H A ++ W+P +
Sbjct: 319 REPFLLSGGDDGALKIWDLRQF---------KSGSPVATFKQ--HVAPVTSVEWHPQDSG 367
Query: 265 VICSVSEDNIMQEYCDSTDSD 285
V + D+ + ++ + + D
Sbjct: 368 VFAASGADHQITQWDLAVERD 388
Score = 116 (45.9 bits), Expect = 0.00084, P = 0.00084
Identities = 34/140 (24%), Positives = 56/140 (40%)
Query: 140 KPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALW---DLRNLKLKLHSFESHKDEI 196
KP + H E L ++P L TG K + LW D + + F H +
Sbjct: 205 KPIFSFAGHMGEGFALDWSPRVTGRLLTGDCQKNIHLWTPTDGGSWHVDQRPFVGHTRSV 264
Query: 197 FQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDF 256
+QWSP T+ AS D + +WD+ A +L H ++
Sbjct: 265 EDLQWSPTENTVFASCSADASIRIWDIR----------AAPSKACMLTTATAHDGDVNVI 314
Query: 257 SWNPNEPWVICSVSEDNIMQ 276
SW+ EP+++ S +D ++
Sbjct: 315 SWSRREPFLL-SGGDDGALK 333
>WB|WBGene00021899 [details] [associations]
symbol:Y54H5A.1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0009792 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
GeneTree:ENSGT00550000075124 HOGENOM:HOG000036730 KO:K14848
OMA:NRLMMLR EMBL:FO081201 RefSeq:NP_498091.1
ProteinModelPortal:Q9N393 SMR:Q9N393 DIP:DIP-26654N
MINT:MINT-1128766 STRING:Q9N393 PaxDb:Q9N393
EnsemblMetazoa:Y54H5A.1.1 EnsemblMetazoa:Y54H5A.1.2
EnsemblMetazoa:Y54H5A.1.3 GeneID:175701 KEGG:cel:CELE_Y54H5A.1
UCSC:Y54H5A.1.1 CTD:175701 WormBase:Y54H5A.1 InParanoid:Q9N393
NextBio:889274 Uniprot:Q9N393
Length = 453
Score = 226 (84.6 bits), Expect = 4.0e-16, P = 4.0e-16
Identities = 50/171 (29%), Positives = 87/171 (50%)
Query: 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVD-AHTAEVNCLSFNPYSEY 163
S +D+AW L S + D + +WDTRS TV AH ++VN +S+N + E
Sbjct: 277 SVEDLAWSPTETGLLASCSADGSIKLWDTRSAPKDACVCTVQKAHESDVNVISWNRH-EN 335
Query: 164 ILATGSADKTVALWDLRNLKL--KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVW 221
++ +G D + +W L+ ++ + F+ H I V W PH T +SG D + +W
Sbjct: 336 LIVSGGDDGELKIWSLKTIQFGQPVALFKYHNSPITSVDWHPHETTTFMASGEDDQTTIW 395
Query: 222 DLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED 272
D++ + Q+ + E PP+L+F+H G ++ + W+ P + + S D
Sbjct: 396 DIATEADGQT--NIEGVPPQLMFVHMGQN-EVKEVHWHQQIPGLAINTSID 443
Score = 146 (56.5 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 43/184 (23%), Positives = 84/184 (45%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNV-SKPSHTVDAHTAEVNCLSFNPYSEYILAT 167
+AW L + +K+ +W + + ++ + H V L+++P +LA+
Sbjct: 234 LAWSSLKTGDLATGDIIKKIYLWQMKEGGQWAVGANPLTGHKKSVEDLAWSPTETGLLAS 293
Query: 168 GSADKTVALWDLRNLKLKLHSF---ESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLS 224
SAD ++ LWD R+ ++H+ ++ + W+ H E ++ S G D L +W L
Sbjct: 294 CSADGSIKLWDTRSAPKDACVCTVQKAHESDVNVISWNRH-ENLIVSGGDDGELKIWSLK 352
Query: 225 KIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDS 284
I + G P LF + H + I+ W+P+E + ED+ + +T++
Sbjct: 353 TI---------QFGQPVALFKY--HNSPITSVDWHPHETTTFMASGEDDQTTIWDIATEA 401
Query: 285 DTKT 288
D +T
Sbjct: 402 DGQT 405
>ASPGD|ASPL0000069856 [details] [associations]
symbol:AN7205 species:162425 "Emericella nidulans"
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0042254 "ribosome biogenesis" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001304 InterPro:IPR022052
Pfam:PF12265 HOGENOM:HOG000036730 OMA:NRLMMLR
EnsemblFungi:CADANIAT00000249 Uniprot:C8VD17
Length = 492
Score = 226 (84.6 bits), Expect = 5.0e-16, P = 5.0e-16
Identities = 50/172 (29%), Positives = 92/172 (53%)
Query: 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYI 164
S +++ W +++F S + D + +WD RS + S P+ V +VN ++++ + ++
Sbjct: 305 SVEELQWSPNEKNVFASASSDGTVKVWDVRSKSRS-PAVNVKISNTDVNVMTWSKQTSHL 363
Query: 165 LATGSADKTVALWDLRNLKLK-----------LHSFESHKDEIFQVQWSPHNETILASSG 213
LATG+ D A+WDLR+ K + SF HK+ I ++W P +++++A
Sbjct: 364 LATGADDGQWAVWDLRHWKPNPSSSAPITASPVASFNFHKEPITSIEWHPTDDSVIAVGS 423
Query: 214 TDRRLHVWDLS-KIGEEQSTEDA-EDGPPELLFIHGGHTAKISDFSWNPNEP 263
D + +WDL+ ++ EE+S E D PP+LLF+H + + + W P
Sbjct: 424 ADNTVTLWDLAVELDEEESREAGLADVPPQLLFVH--YMESVKEVHWQAQMP 473
Score = 128 (50.1 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 43/183 (23%), Positives = 75/183 (40%)
Query: 111 WHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHT--VDAHTAEVNCLSFNPYSEYILATG 168
W LH D+ L+ TR+ + T H + V L ++P + + A+
Sbjct: 263 WSPLHPLGKLLTGDNDGLIYVTTRTEGGGWVTDTRAFRGHASSVEELQWSPNEKNVFASA 322
Query: 169 SADKTVALWDLRNL-KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIG 227
S+D TV +WD+R+ + + + ++ + WS +LA+ D + VWDL
Sbjct: 323 SSDGTVKVWDVRSKSRSPAVNVKISNTDVNVMTWSKQTSHLLATGADDGQWAVWDLRHWK 382
Query: 228 EEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTK 287
S+ P F H I+ W+P + VI S DN + + + + D +
Sbjct: 383 PNPSSSAPITASPVASF--NFHKEPITSIEWHPTDDSVIAVGSADNTVTLWDLAVELDEE 440
Query: 288 TMR 290
R
Sbjct: 441 ESR 443
>CGD|CAL0001341 [details] [associations]
symbol:orf19.6355 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0001341 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AACQ01000192 EMBL:AACQ01000189
InterPro:IPR022052 Pfam:PF12265 KO:K14848 RefSeq:XP_711573.1
RefSeq:XP_711642.1 ProteinModelPortal:Q59PD8 STRING:Q59PD8
GeneID:3646750 GeneID:3646833 KEGG:cal:CaO19.13712
KEGG:cal:CaO19.6355 eggNOG:NOG254774 Uniprot:Q59PD8
Length = 517
Score = 226 (84.6 bits), Expect = 5.7e-16, P = 5.7e-16
Identities = 58/195 (29%), Positives = 99/195 (50%)
Query: 97 TQNFPFPLSR---QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVN 153
T PF S+ +D+ W ++F + D + IWDTRS KP+ +V A ++VN
Sbjct: 318 TDKTPFFASQSSIEDIQWSTGETTVFATGGCDGYIRIWDTRSKK-HKPALSVIASKSDVN 376
Query: 154 CLSFNPYSEYILATGSADKTVALWDLRNLKLKLHS-------FESHKDEIFQVQWSPHNE 206
+S++ ++LA+G D + +WDLRN S ++ HK I + ++P +E
Sbjct: 377 VISWSSKINHLLASGHDDGSWGVWDLRNFTNNTTSNPSPVANYDFHKSPITSISFNPLDE 436
Query: 207 TILASSGTDRRLHVWDLS------KIGEEQS-TEDAEDGPPELLFIHGGHTAKISDFSWN 259
+I+A S D + +WDL+ +I +++ ++ D PP+LLF+H K D W+
Sbjct: 437 SIIAVSSEDNTVTLWDLAVEADDEEISQQRKEAQELHDIPPQLLFVHWQRDVK--DVRWH 494
Query: 260 PNEPWVICSVSEDNI 274
P P + S D +
Sbjct: 495 PQIPGCLVSTGGDGL 509
Score = 117 (46.2 bits), Expect = 0.00081, P = 0.00081
Identities = 34/123 (27%), Positives = 56/123 (45%)
Query: 164 ILATGSADKTVALWDLRNLKLK-LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWD 222
+ ATG D + +WD R+ K K S + K ++ + WS +LAS D VWD
Sbjct: 342 VFATGGCDGYIRIWDTRSKKHKPALSVIASKSDVNVISWSSKINHLLASGHDDGSWGVWD 401
Query: 223 LSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDST 282
L T + P + + H + I+ S+NP + +I SEDN + + +
Sbjct: 402 LRNF-----TNNTTSNPSPVAN-YDFHKSPITSISFNPLDESIIAVSSEDNTVTLWDLAV 455
Query: 283 DSD 285
++D
Sbjct: 456 EAD 458
>UNIPROTKB|Q59PD8 [details] [associations]
symbol:RRB1 "Likely nucleolar ribosome biogenesis factor
Rrb1p" species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0001341 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AACQ01000192 EMBL:AACQ01000189
InterPro:IPR022052 Pfam:PF12265 KO:K14848 RefSeq:XP_711573.1
RefSeq:XP_711642.1 ProteinModelPortal:Q59PD8 STRING:Q59PD8
GeneID:3646750 GeneID:3646833 KEGG:cal:CaO19.13712
KEGG:cal:CaO19.6355 eggNOG:NOG254774 Uniprot:Q59PD8
Length = 517
Score = 226 (84.6 bits), Expect = 5.7e-16, P = 5.7e-16
Identities = 58/195 (29%), Positives = 99/195 (50%)
Query: 97 TQNFPFPLSR---QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVN 153
T PF S+ +D+ W ++F + D + IWDTRS KP+ +V A ++VN
Sbjct: 318 TDKTPFFASQSSIEDIQWSTGETTVFATGGCDGYIRIWDTRSKK-HKPALSVIASKSDVN 376
Query: 154 CLSFNPYSEYILATGSADKTVALWDLRNLKLKLHS-------FESHKDEIFQVQWSPHNE 206
+S++ ++LA+G D + +WDLRN S ++ HK I + ++P +E
Sbjct: 377 VISWSSKINHLLASGHDDGSWGVWDLRNFTNNTTSNPSPVANYDFHKSPITSISFNPLDE 436
Query: 207 TILASSGTDRRLHVWDLS------KIGEEQS-TEDAEDGPPELLFIHGGHTAKISDFSWN 259
+I+A S D + +WDL+ +I +++ ++ D PP+LLF+H K D W+
Sbjct: 437 SIIAVSSEDNTVTLWDLAVEADDEEISQQRKEAQELHDIPPQLLFVHWQRDVK--DVRWH 494
Query: 260 PNEPWVICSVSEDNI 274
P P + S D +
Sbjct: 495 PQIPGCLVSTGGDGL 509
Score = 117 (46.2 bits), Expect = 0.00081, P = 0.00081
Identities = 34/123 (27%), Positives = 56/123 (45%)
Query: 164 ILATGSADKTVALWDLRNLKLK-LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWD 222
+ ATG D + +WD R+ K K S + K ++ + WS +LAS D VWD
Sbjct: 342 VFATGGCDGYIRIWDTRSKKHKPALSVIASKSDVNVISWSSKINHLLASGHDDGSWGVWD 401
Query: 223 LSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDST 282
L T + P + + H + I+ S+NP + +I SEDN + + +
Sbjct: 402 LRNF-----TNNTTSNPSPVAN-YDFHKSPITSISFNPLDESIIAVSSEDNTVTLWDLAV 455
Query: 283 DSD 285
++D
Sbjct: 456 EAD 458
>UNIPROTKB|F1RL85 [details] [associations]
symbol:GRWD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
GeneTree:ENSGT00550000075124 KO:K14848 OMA:NRLMMLR EMBL:FP102301
RefSeq:XP_003127319.1 UniGene:Ssc.24214 Ensembl:ENSSSCT00000003475
GeneID:100521273 KEGG:ssc:100521273 Uniprot:F1RL85
Length = 445
Score = 221 (82.9 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 52/175 (29%), Positives = 90/175 (51%)
Query: 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSH--TVDAHTAEVNCLSFNPYSE 162
S +D+ W +++F S + D + IWD R+ SK T AH +VN +S++
Sbjct: 262 SVEDLQWSPTEDTVFASCSADASIRIWDIRAAP-SKACMLTTPAAHNGDVNVISWSRQEP 320
Query: 163 YILATGSADKTVALWDLRNLKL--KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHV 220
++L+ G D + +WDLR K + +F+ H + V+W P + + A+SG D ++
Sbjct: 321 FLLSGGD-DGALKVWDLRQFKSGSPVATFKQHVAPVTSVEWHPQDSGVFAASGADNQITQ 379
Query: 221 WDLS-KIGEEQSTEDAEDG----PPELLFIHGGHTAKISDFSWNPNEPWVICSVS 270
WDL+ + E + + G P +LLF+H G T + + W+P P V+ S +
Sbjct: 380 WDLAVERDPEAGDTETDPGLVGLPQQLLFVHQGET-DLKELHWHPQCPGVLVSTA 433
Score = 145 (56.1 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 45/169 (26%), Positives = 76/169 (44%)
Query: 124 DDQK-LMIW---DTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDL 179
D QK + +W D+ S +V + HT V L ++P + + A+ SAD ++ +WD+
Sbjct: 233 DCQKNIHLWTPTDSGSWHVDQRPFV--GHTRSVEDLQWSPTEDTVFASCSADASIRIWDI 290
Query: 180 RNLKLK---LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAE 236
R K L + +H ++ + WS E L S G D L VWDL + +
Sbjct: 291 RAAPSKACMLTTPAAHNGDVNVISWS-RQEPFLLSGGDDGALKVWDLRQF---------K 340
Query: 237 DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSD 285
G P F H A ++ W+P + V + DN + ++ + + D
Sbjct: 341 SGSPVATFKQ--HVAPVTSVEWHPQDSGVFAASGADNQITQWDLAVERD 387
Score = 129 (50.5 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 38/159 (23%), Positives = 62/159 (38%)
Query: 122 VADDQKLMIWDTRSHNVS-KPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALW--- 177
V DD + + R KP H E L ++P L TG K + LW
Sbjct: 185 VVDDPQALATFLRDEQARVKPIFAFSGHMGEGFALDWSPRVPGRLLTGDCQKNIHLWTPT 244
Query: 178 DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAED 237
D + + F H + +QWSP +T+ AS D + +WD+ A
Sbjct: 245 DSGSWHVDQRPFVGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIR----------AAP 294
Query: 238 GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276
+L H ++ SW+ EP+++ S +D ++
Sbjct: 295 SKACMLTTPAAHNGDVNVISWSRQEPFLL-SGGDDGALK 332
>SGD|S000004738 [details] [associations]
symbol:RRB1 "Nuclear protein involved in early steps of
ribosome biogenesis" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0042254
"ribosome biogenesis" evidence=IEA;IMP;IPI] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000004738 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0042254 EMBL:BK006946
GO:GO:0006364 InterPro:IPR022052 Pfam:PF12265 EMBL:Z48622
GeneTree:ENSGT00550000075124 HOGENOM:HOG000036730 KO:K14848
OMA:NRLMMLR OrthoDB:EOG4XWK6B PIR:S53061 RefSeq:NP_013850.1
ProteinModelPortal:Q04225 SMR:Q04225 DIP:DIP-6263N IntAct:Q04225
MINT:MINT-1168783 STRING:Q04225 PaxDb:Q04225 PeptideAtlas:Q04225
EnsemblFungi:YMR131C GeneID:855161 KEGG:sce:YMR131C CYGD:YMR131c
NextBio:978584 Genevestigator:Q04225 GermOnline:YMR131C
Uniprot:Q04225
Length = 511
Score = 220 (82.5 bits), Expect = 2.7e-15, P = 2.7e-15
Identities = 54/196 (27%), Positives = 96/196 (48%)
Query: 97 TQNFPFPLSR----QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEV 152
T PF +S +D+ W ++F + D + IWDTRS KP+ +V A +V
Sbjct: 311 TDKQPFTVSNNKSIEDIQWSRTESTVFATAGCDGYIRIWDTRSKK-HKPAISVKASNTDV 369
Query: 153 NCLSFNPYSEYILATGSADKTVALWDLRNLKLK-------LHSFESHKDEIFQVQWSPHN 205
N +S++ Y+LA+G + T +WDLR + ++ HK I + ++P +
Sbjct: 370 NVISWSDKIGYLLASGDDNGTWGVWDLRQFTPSNADAVQPVAQYDFHKGAITSIAFNPLD 429
Query: 206 ETILASSGTDRRLHVWDLSKIGEEQS-------TEDAEDGPPELLFIHGGHTAKISDFSW 258
E+I+A D + +WDLS +++ T++ ++ PP+LLF+H ++ D W
Sbjct: 430 ESIVAVGSEDNTVTLWDLSVEADDEEIKQQAAETKELQEIPPQLLFVHW--QKEVKDVKW 487
Query: 259 NPNEPWVICSVSEDNI 274
+ P + S D +
Sbjct: 488 HKQIPGCLVSTGTDGL 503
>UNIPROTKB|F1N575 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:DAAA02061261
EMBL:DAAA02061262 IPI:IPI00905134 Ensembl:ENSBTAT00000048510
ArrayExpress:F1N575 Uniprot:F1N575
Length = 585
Score = 208 (78.3 bits), Expect = 8.2e-14, P = 8.2e-14
Identities = 79/277 (28%), Positives = 130/277 (46%)
Query: 29 PLSHSIYRFYRLC-VAEPFDDAVEERVINEEYKIWKKNTPFLYDL-VVNNYVANISCILN 86
P + R + C E DD E+ + E K+ + + +Y + + +SC +
Sbjct: 302 PHQVDVSRIHLACDFLEEEDD--EDDNLGTEMKVLRGHCGPVYSTRFLADSSGLLSCSED 359
Query: 87 ISILFFEI-IFT-----QNFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSK 140
+SI ++++ FT Q +P+ D++ H L+ F S + D+ +W S + +
Sbjct: 360 MSIRYWDLGSFTNTVLYQGHAYPVWDLDISPHSLY---FASASHDRTARLW---SFDRTY 413
Query: 141 PSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQ 200
P H A+V+C+ F+P S Y LATGS DKTV LW + + F H+ + +
Sbjct: 414 PLRIYAGHLADVDCVKFHPNSNY-LATGSTDKTVRLWSTQQGN-SVRLFTGHRGPVLSLA 471
Query: 201 WSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNP 260
+SP N LAS+G D+RL +WDL+ G EL GHT I+ +++P
Sbjct: 472 FSP-NGKYLASAGEDQRLKLWDLAS-GTLYK---------ELR----GHTDNITSLTFSP 516
Query: 261 NEPWVICSVSEDN------IMQEYCDSTDSDTKTMRL 291
+ ++ S S DN I +C ST +D + L
Sbjct: 517 DSS-LVASASMDNSVRVWDIRSSHC-STPADGSSSEL 551
>UNIPROTKB|E2RR78 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043966 "histone H3 acetylation"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:AAEX03002720
Ensembl:ENSCAFT00000019257 NextBio:20862231 Uniprot:E2RR78
Length = 607
Score = 204 (76.9 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 80/271 (29%), Positives = 128/271 (47%)
Query: 29 PLSHSIYRFYRLC-VAEPFDDAVEERVINEEYKIWKKNTPFLYDL-VVNNYVANISCILN 86
P + R + C + E DD E+ E KI + + +Y + + +SC +
Sbjct: 324 PHQVDVSRIHLACDILEEEDD--EDDNAGTEMKILRGHCGPVYSTRFLADSSGLLSCSED 381
Query: 87 ISILFFEI-IFT-----QNFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSK 140
+SI ++++ FT Q +P+ D++ + L+ F S + D+ +W S + +
Sbjct: 382 MSIRYWDLGSFTNTVLYQGHAYPVWDLDISPYSLY---FASGSHDRTARLW---SFDRTY 435
Query: 141 PSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQ 200
P H A+V+C+ F+P S Y LATGS DKTV LW + + F H+ + +
Sbjct: 436 PLRIYAGHLADVDCVKFHPNSNY-LATGSTDKTVRLWSAQQGN-SVRLFTGHRGPVLSLA 493
Query: 201 WSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNP 260
+SP N LAS+G D+RL +WDL+ G EL GHT I+ +++P
Sbjct: 494 FSP-NGKYLASAGEDQRLKLWDLAS-GTLYK---------ELR----GHTDNITSLTFSP 538
Query: 261 NEPWVICSVSEDN------IMQEYCDSTDSD 285
+ +I S S DN I YC ST +D
Sbjct: 539 DSS-LIASASMDNSVRVWDIRNTYC-STPAD 567
>UNIPROTKB|O75529 [details] [associations]
symbol:TAF5L "TAF5-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa subunit 5L"
species:9606 "Homo sapiens" [GO:0004402 "histone acetyltransferase
activity" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0030914 "STAGA complex" evidence=IDA]
[GO:0043966 "histone H3 acetylation" evidence=IDA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AJ009770
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 EMBL:AL121990 EMBL:CH471098 GO:GO:0003713
GO:GO:0006366 GO:GO:0043966 GO:GO:0030914 GO:GO:0033276
EMBL:AF069736 EMBL:BC041094 IPI:IPI00004325 IPI:IPI00410088
RefSeq:NP_001020418.1 RefSeq:NP_055224.1 UniGene:Hs.270621
ProteinModelPortal:O75529 SMR:O75529 DIP:DIP-28147N IntAct:O75529
STRING:O75529 PhosphoSite:O75529 PaxDb:O75529 PRIDE:O75529
DNASU:27097 Ensembl:ENST00000258281 Ensembl:ENST00000366675
Ensembl:ENST00000366676 GeneID:27097 KEGG:hsa:27097 UCSC:uc001htq.3
UCSC:uc001htr.3 CTD:27097 GeneCards:GC01M229728 HGNC:HGNC:17304
neXtProt:NX_O75529 PharmGKB:PA38223 HOGENOM:HOG000212423
HOVERGEN:HBG050226 InParanoid:O75529 KO:K03130 OMA:YVDSEGP
OrthoDB:EOG4NCMCF PhylomeDB:O75529 ChiTaRS:TAF5L GenomeRNAi:27097
NextBio:49741 ArrayExpress:O75529 Bgee:O75529 CleanEx:HS_TAF5L
Genevestigator:O75529 GermOnline:ENSG00000135801 Uniprot:O75529
Length = 589
Score = 200 (75.5 bits), Expect = 6.5e-13, P = 6.5e-13
Identities = 80/277 (28%), Positives = 129/277 (46%)
Query: 29 PLSHSIYRFYRLC-VAEPFDDAVEERVINEEYKIWKKNTPFLYDL-VVNNYVANISCILN 86
P + R + C + E DD E+ E KI + + +Y + + +SC +
Sbjct: 306 PHQVDVSRIHLACDILEEEDD--EDDNAGTEMKILRGHCGPVYSTRFLADSSGLLSCSED 363
Query: 87 ISILFFEI-IFT-----QNFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSK 140
+SI ++++ FT Q +P+ D++ + L+ F S + D+ +W S + +
Sbjct: 364 MSIRYWDLGSFTNTVLYQGHAYPVWDLDISPYSLY---FASGSHDRTARLW---SFDRTY 417
Query: 141 PSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQ 200
P H A+V+C+ F+P S Y LATGS DKTV LW + + F H+ + +
Sbjct: 418 PLRIYAGHLADVDCVKFHPNSNY-LATGSTDKTVRLWSAQQGN-SVRLFTGHRGPVLSLA 475
Query: 201 WSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNP 260
+SP N LAS+G D+RL +WDL+ G EL GHT I+ +++P
Sbjct: 476 FSP-NGKYLASAGEDQRLKLWDLAS-GTLYK---------ELR----GHTDNITSLTFSP 520
Query: 261 NEPWVICSVSEDN------IMQEYCDSTDSDTKTMRL 291
+ +I S S DN I YC S +D + L
Sbjct: 521 DSG-LIASASMDNSVRVWDIRNTYC-SAPADGSSSEL 555
>UNIPROTKB|F1RG42 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 KO:K03130 OMA:YVDSEGP
EMBL:CU468504 RefSeq:XP_001927989.1 ProteinModelPortal:F1RG42
Ensembl:ENSSSCT00000011153 GeneID:100155476 KEGG:ssc:100155476
Uniprot:F1RG42
Length = 589
Score = 199 (75.1 bits), Expect = 8.4e-13, P = 8.4e-13
Identities = 72/248 (29%), Positives = 121/248 (48%)
Query: 34 IYRFYRLC-VAEPFDDAVEERVINEEYKIWKKNTPFLYDL-VVNNYVANISCILNISILF 91
+ R + C + E DD E+ + E K+ + + +Y + + +SC ++SI +
Sbjct: 311 VSRIHLACDILEEEDD--EDDDVGTEMKVLRGHCGPVYSTRFLADSSGLLSCSEDMSIRY 368
Query: 92 FEI-IFT-----QNFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTV 145
+++ FT Q +P+ D++ + L+ F S + D+ +W S + + P
Sbjct: 369 WDLGSFTNTVLYQGHAYPVWDVDISPYSLY---FASGSHDRTARLW---SFDRTYPLRIY 422
Query: 146 DAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHN 205
H A+V+C+ F+P S Y LATGS DKTV LW + + F H+ + + +SP N
Sbjct: 423 AGHLADVDCVKFHPNSNY-LATGSTDKTVRLWSAQQGN-SVRLFTGHRGPVLSLAFSP-N 479
Query: 206 ETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWV 265
LAS+G D+RL +WDL+ G EL GHT I+ +++P+ +
Sbjct: 480 GKYLASAGEDQRLKLWDLAS-GTLFK---------ELR----GHTDNITSLTFSPDSS-L 524
Query: 266 ICSVSEDN 273
I S S DN
Sbjct: 525 IASASMDN 532
Score = 125 (49.1 bits), Expect = 0.00013, P = 0.00013
Identities = 34/154 (22%), Positives = 71/154 (46%)
Query: 125 DQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKL 184
D+ + +W + N + H V L+F+P +Y+ + G D+ + LWDL + L
Sbjct: 447 DKTVRLWSAQQGNSVR---LFTGHRGPVLSLAFSPNGKYLASAGE-DQRLKLWDLASGTL 502
Query: 185 KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLF 244
H D I + +SP + +++AS+ D + VWD+ T+ + EL+
Sbjct: 503 -FKELRGHTDNITSLTFSP-DSSLIASASMDNSVRVWDIRNTHCSAPTDGSSS---ELVG 557
Query: 245 IHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEY 278
++ G + + + ++ ++++N QE+
Sbjct: 558 VYTGQMSNVLSVQFMACNLLLVTGITQEN--QEH 589
>TAIR|locus:2029939 [details] [associations]
symbol:PEX7 "AT1G29260" species:3702 "Arabidopsis
thaliana" [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006625 "protein
targeting to peroxisome" evidence=IMP] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0016558 "protein import into
peroxisome matrix" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005778 EMBL:AC021043
HSSP:P16649 GO:GO:0080008 GO:GO:0006625 TCDB:3.A.20.1.2
EMBL:AF130973 EMBL:BT024863 IPI:IPI00548845 PIR:B86415
RefSeq:NP_174220.1 UniGene:At.11271 ProteinModelPortal:Q9XF57
SMR:Q9XF57 STRING:Q9XF57 PaxDb:Q9XF57 PRIDE:Q9XF57
EnsemblPlants:AT1G29260.1 GeneID:839800 KEGG:ath:AT1G29260
GeneFarm:3660 TAIR:At1g29260 HOGENOM:HOG000204332 InParanoid:Q9LP54
KO:K13341 OMA:GHEYAVR PhylomeDB:Q9XF57 ProtClustDB:CLSN2679693
Genevestigator:Q9XF57 Uniprot:Q9XF57
Length = 317
Score = 190 (71.9 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 40/114 (35%), Positives = 62/114 (54%)
Query: 111 WHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHT--VDAHTAEVNCLSFNPYSEYILATG 168
W+ H +F S + D L IWD R +P T + AH E+ +N Y + ILAT
Sbjct: 157 WNPKHGDVFASASGDCTLRIWDVR-----EPGSTMIIPAHDFEILSCDWNKYDDCILATS 211
Query: 169 SADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWD 222
S DKTV +WD+R+ ++ L H + +V++SPH +++AS D + +WD
Sbjct: 212 SVDKTVKVWDVRSYRVPLAVLNGHGYAVRKVKFSPHRRSLIASCSYDMSVCLWD 265
Score = 164 (62.8 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 35/120 (29%), Positives = 57/120 (47%)
Query: 108 DVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILAT 167
DV W H+S+ + D + I+DT S P + H EV + +NP T
Sbjct: 65 DVCWSESHDSVLIAAIGDGSVKIYDTALPPPSNPIRSFQEHAREVQSVDYNPTRRDSFLT 124
Query: 168 GSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIG 227
S D TV LW + + + +F+ H ++Q W+P + + AS+ D L +WD+ + G
Sbjct: 125 SSWDDTVKLWAM-DRPASVRTFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWDVREPG 183
Score = 132 (51.5 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 28/111 (25%), Positives = 56/111 (50%)
Query: 111 WHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSA 170
W+ + + + + D+ + +WD RS+ V P ++ H V + F+P+ ++A+ S
Sbjct: 200 WNKYDDCILATSSVDKTVKVWDVRSYRV--PLAVLNGHGYAVRKVKFSPHRRSLIASCSY 257
Query: 171 DKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVW 221
D +V LWD + ++ H + + S E ++AS+G D ++VW
Sbjct: 258 DMSVCLWDYMVEDALVGRYDHHTEFAVGIDMSVLVEGLMASTGWDELVYVW 308
>UNIPROTKB|Q7PS24 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7165 "Anopheles gambiae"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT OrthoDB:EOG45DV4X
EMBL:AAAB01008846 RefSeq:XP_310648.3 HSSP:P63005
ProteinModelPortal:Q7PS24 STRING:Q7PS24
EnsemblMetazoa:AGAP000444-RA GeneID:1271794
KEGG:aga:AgaP_AGAP000444 VectorBase:AGAP000444 CTD:1271794
PhylomeDB:Q7PS24 Uniprot:Q7PS24
Length = 341
Score = 191 (72.3 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 55/189 (29%), Positives = 96/189 (50%)
Query: 110 AWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTV--DAHTAEVNCLSFNPYSEYILAT 167
AWH LF S +D+ + +W+ +S + TV D HT + L+++ Y LA+
Sbjct: 21 AWHP-GGKLFASCGEDKTIRVWN-KSDTDRWVAQTVLTDGHTRTIRELAWSCCGHY-LAS 77
Query: 168 GSADKTVALWDLRNLKLKLHS-FESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
S D TVA+WD ++ + + ++ E H +E+ V WS + +LA+ D+ + +W++
Sbjct: 78 ASFDTTVAVWDKKSGEFECNATLEGHDNEVKSVTWS-RSGNLLATCSRDKSVWIWEI--- 133
Query: 227 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYC-DSTDSD 285
D ED E + + GHT + W+P E ++ S S DN ++ Y D DS+
Sbjct: 134 ---HHAPDQED-EYECVAVLNGHTQDVKKVCWHPQED-LLASASYDNTIRMYRQDLADSE 188
Query: 286 TKTMR-LDS 293
+ + L+S
Sbjct: 189 WEMLEPLES 197
>DICTYBASE|DDB_G0279801 [details] [associations]
symbol:pex7 "peroxisomal biogenesis factor 7"
species:44689 "Dictyostelium discoideum" [GO:0016558 "protein
import into peroxisome matrix" evidence=IEA] [GO:0005777
"peroxisome" evidence=IEA;ISS] [GO:0005053 "peroxisome matrix
targeting signal-2 binding" evidence=IEA;ISS] [GO:0007031
"peroxisome organization" evidence=ISS] [GO:0015031 "protein
transport" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0279801 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GenomeReviews:CM000152_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007031 GO:GO:0016558 EMBL:AAFI02000033
HSSP:P46680 KO:K13341 OMA:GHEYAVR GO:GO:0005053 RefSeq:XP_641489.1
ProteinModelPortal:Q54WA3 STRING:Q54WA3 EnsemblProtists:DDB0233068
GeneID:8622229 KEGG:ddi:DDB_G0279801 InParanoid:Q54WA3
ProtClustDB:CLSZ2729075 PANTHER:PTHR22850:SF4 Uniprot:Q54WA3
Length = 316
Score = 188 (71.2 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 38/115 (33%), Positives = 64/115 (55%)
Query: 111 WHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSA 170
W + LF SV+ D+ L IWD+R + + +T+ AH E+ +N Y++ + TGS
Sbjct: 155 WSPRNAHLFASVSGDRTLKIWDSRDN---RSLNTIKAHDHEILTCDWNKYNDKEVVTGSV 211
Query: 171 DKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 225
DKT+ +WD+R H + +++ SPH+E++LAS D + VWD ++
Sbjct: 212 DKTIRIWDIRYPDRPTTILRGHTYAVRRIKCSPHSESMLASCSYDMSVIVWDRAR 266
Score = 180 (68.4 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 40/130 (30%), Positives = 66/130 (50%)
Query: 108 DVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILAT 167
D W +E S + D + IWDT++ + +P + + HT EV + +N ++ T
Sbjct: 63 DCTWSEENECHVASSSGDGSIKIWDTQAPSGGRPIKSFEEHTKEVYSVDWNLVTKDTFIT 122
Query: 168 GSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIG 227
GS D+++ +W+ R + L +F H+ I+ WSP N + AS DR L +WD S+
Sbjct: 123 GSWDQSIKIWNPR-MDRSLKTFREHRYCIYSAIWSPRNAHLFASVSGDRTLKIWD-SRDN 180
Query: 228 EEQSTEDAED 237
+T A D
Sbjct: 181 RSLNTIKAHD 190
Score = 128 (50.1 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 33/114 (28%), Positives = 60/114 (52%)
Query: 116 ESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVA 175
E + GSV D+ + IWD R + +P+ + HT V + +P+SE +LA+ S D +V
Sbjct: 205 EVVTGSV--DKTIRIWDIRYPD--RPTTILRGHTYAVRRIKCSPHSESMLASCSYDMSVI 260
Query: 176 LWD-LRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGE 228
+WD R + + H + + + W+ + +AS D ++ VW+L + G+
Sbjct: 261 VWDRAREQDPIIARMDHHTEFVVGLDWNMFIDGQMASCSWDEQVCVWNLGRPGQ 314
Score = 120 (47.3 bits), Expect = 0.00016, P = 0.00016
Identities = 30/136 (22%), Positives = 65/136 (47%)
Query: 157 FNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDR 216
++P + ++ A+ S D+T+ +WD R+ + L++ ++H EI W+ +N+ + + D+
Sbjct: 155 WSPRNAHLFASVSGDRTLKIWDSRDNR-SLNTIKAHDHEILTCDWNKYNDKEVVTGSVDK 213
Query: 217 RLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276
+ +WD+ D P +L GHT + +P+ ++ S S D +
Sbjct: 214 TIRIWDIRY----------PDRPTTIL---RGHTYAVRRIKCSPHSESMLASCSYDMSVI 260
Query: 277 EYCDSTDSDTKTMRLD 292
+ + + D R+D
Sbjct: 261 VWDRAREQDPIIARMD 276
>FB|FBgn0035922 [details] [associations]
symbol:Pex7 "Peroxin 7" species:7227 "Drosophila
melanogaster" [GO:0007031 "peroxisome organization" evidence=ISS]
[GO:0005053 "peroxisome matrix targeting signal-2 binding"
evidence=ISS] [GO:0005777 "peroxisome" evidence=ISS] [GO:0016558
"protein import into peroxisome matrix" evidence=IEA] [GO:0006911
"phagocytosis, engulfment" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006911 EMBL:AE014296 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016558 KO:K13341
OMA:GHEYAVR GO:GO:0005053 PANTHER:PTHR22850:SF4
GeneTree:ENSGT00700000104578 RefSeq:NP_001137914.1
RefSeq:NP_648251.1 UniGene:Dm.15472 SMR:Q9VSN7 DIP:DIP-21383N
IntAct:Q9VSN7 MINT:MINT-790667 STRING:Q9VSN7
EnsemblMetazoa:FBtr0076568 EnsemblMetazoa:FBtr0273328 GeneID:38994
KEGG:dme:Dmel_CG6486 UCSC:CG6486-RA FlyBase:FBgn0035922
InParanoid:Q9VSN7 OrthoDB:EOG431ZDN ChiTaRS:CG6486 GenomeRNAi:38994
NextBio:811365 Uniprot:Q9VSN7
Length = 339
Score = 187 (70.9 bits), Expect = 4.7e-12, P = 4.7e-12
Identities = 45/164 (27%), Positives = 81/164 (49%)
Query: 117 SLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVAL 176
+LF SV+ D L +W++ KP +++AH +E C ++ + +L TG +D +
Sbjct: 181 NLFASVSTDGHLNLWNSLDF-AGKPLMSIEAHASEALCCDWSHFDRNVLVTGGSDGLIRG 239
Query: 177 WDLRNLKLKLHSFESHKDE--IFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTED 234
WDLR K++ H FE + E + ++ SPH+ +LAS+ D +W+L + GE
Sbjct: 240 WDLR--KMRTHVFELYSGEFAVRRLACSPHSAAVLASANYDFTTRIWNLER-GES----- 291
Query: 235 AEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEY 278
A++ ++ HT + WNP+ + D++ Y
Sbjct: 292 AQE-------VNARHTEFVCGLDWNPHRTHQLADCGWDSLANVY 328
Score = 124 (48.7 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 35/123 (28%), Positives = 61/123 (49%)
Query: 108 DVAWHLLHESLFGSVADDQKLMIW-----DTRSHNVS--KPSHTVDAHTAEVNCLSFNP- 159
DVAW + + + D L IW ++ S+ ++ +P + H EV L +
Sbjct: 75 DVAWCPYAADIAATASGDGSLQIWCGLDGESASNQLTPKQPLICLQEHKNEVYSLDWGEK 134
Query: 160 YSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLH 219
++ + L +GS D T+ LWD N + + +F H D I+ ++SP + AS TD L+
Sbjct: 135 WNYHTLLSGSWDCTLKLWDC-NRQNSITTFVGHNDLIYGAKFSPLIANLFASVSTDGHLN 193
Query: 220 VWD 222
+W+
Sbjct: 194 LWN 196
>MGI|MGI:1919039 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:10090
"Mus musculus" [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1919039 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0003713
GO:GO:0043966 GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OMA:YVDSEGP OrthoDB:EOG4NCMCF
EMBL:AK033477 EMBL:AK089463 EMBL:BC013550 IPI:IPI00128308
RefSeq:NP_598727.1 UniGene:Mm.291777 ProteinModelPortal:Q91WQ5
SMR:Q91WQ5 IntAct:Q91WQ5 STRING:Q91WQ5 PhosphoSite:Q91WQ5
PRIDE:Q91WQ5 Ensembl:ENSMUST00000093039 Ensembl:ENSMUST00000165628
GeneID:102162 KEGG:mmu:102162 UCSC:uc009nww.1 InParanoid:Q91WQ5
NextBio:355322 Bgee:Q91WQ5 Genevestigator:Q91WQ5
GermOnline:ENSMUSG00000038697 Uniprot:Q91WQ5
Length = 589
Score = 190 (71.9 bits), Expect = 8.5e-12, P = 8.5e-12
Identities = 66/216 (30%), Positives = 108/216 (50%)
Query: 81 ISCILNISILFFEI-IFT-----QNFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTR 134
+SC ++SI ++++ FT Q +P+ D++ L+ F S + D+ +W
Sbjct: 358 LSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDISPFSLY---FASGSHDRTARLW--- 411
Query: 135 SHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKD 194
S + + P H A+V+C+ F+P S Y LATGS DKTV LW + + F H+
Sbjct: 412 SFDRTYPLRIYAGHLADVDCVKFHPNSNY-LATGSTDKTVRLWSAQQGN-SVRLFTGHRG 469
Query: 195 EIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKIS 254
+ + +SP N LAS+G D+RL +WDL+ G EL GHT I+
Sbjct: 470 PVLSLSFSP-NGKYLASAGEDQRLKLWDLAS-GTLFK---------ELR----GHTDSIT 514
Query: 255 DFSWNPNEPWVICSVSEDNIMQEY-----CDSTDSD 285
+++P+ +I S S DN ++ + C +T +D
Sbjct: 515 SLAFSPDSG-LIASASMDNSVRVWDIRSTCCNTPAD 549
>UNIPROTKB|E1C8E9 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0033276
"transcription factor TFTC complex" evidence=IEA] [GO:0043966
"histone H3 acetylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966 GO:GO:0004402
GO:GO:0030914 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:YVDSEGP EMBL:AADN02035649 EMBL:AADN02035650 IPI:IPI00584483
ProteinModelPortal:E1C8E9 Ensembl:ENSGALT00000018081 Uniprot:E1C8E9
Length = 560
Score = 187 (70.9 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 65/213 (30%), Positives = 104/213 (48%)
Query: 81 ISCILNISILFFEI-IFT-----QNFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTR 134
+SC ++SI ++++ FT Q +P+ D++ L+ F S + D+ +W
Sbjct: 358 LSCSEDMSIRYWDLRSFTNTVLYQGHAYPVWDLDISPCSLY---FASASHDRTARLW--- 411
Query: 135 SHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKD 194
S + + P H +V+C+ F+P S Y LATGS DKTV LW + + F H+
Sbjct: 412 SFDRTYPLRIYAGHLLDVDCVKFHPNSNY-LATGSTDKTVRLWSTQQGN-SVRLFTGHRG 469
Query: 195 EIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKIS 254
+ + +SP N LAS+G D+RL +WDL+ G EL GHT I+
Sbjct: 470 PVLALAFSP-NGKYLASAGEDQRLKLWDLAS-GTLYK---------ELR----GHTDNIT 514
Query: 255 DFSWNPNEPWVICSVSEDN------IMQEYCDS 281
+++P+ +I S S DN I YC++
Sbjct: 515 SLTFSPDSS-LIASASMDNSVRVWDIRNTYCNA 546
>UNIPROTKB|B0XAF3 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7176 "Culex quinquefasciatus"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT OrthoDB:EOG45DV4X
EMBL:DS232580 RefSeq:XP_001866625.1 UniGene:Cpi.8879
ProteinModelPortal:B0XAF3 STRING:B0XAF3
EnsemblMetazoa:CPIJ016096-RA GeneID:6049938
KEGG:cqu:CpipJ_CPIJ016096 VectorBase:CPIJ016096 PhylomeDB:B0XAF3
Uniprot:B0XAF3
Length = 338
Score = 181 (68.8 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 51/190 (26%), Positives = 92/190 (48%)
Query: 111 WHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTV-DAHTAEVNCLSFNPYSEYILATGS 169
WH + + + +D+ + IW P + D HT + ++++P + LA+ S
Sbjct: 22 WHP-RDPVLATCGEDKTIRIWADDGTGRWVPKTVLSDGHTRTIRDVAWSPCGRF-LASAS 79
Query: 170 ADKTVALWDLRNLKLKLHS-FESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGE 228
D TVA+WD R+ + + ++ E H++E+ V WS +LA+ D+ + +W+ + +
Sbjct: 80 FDATVAIWDRRSGEFECNATLEGHENEVKSVSWSKSG-ALLATCSRDKSVWIWE---VAQ 135
Query: 229 EQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYC-DSTDSDTK 287
E E A + H+ + W+PNE V+ S S DN +Q Y D DSD
Sbjct: 136 EDEYECAA--------VLNTHSQDVKKVEWHPNED-VLASASYDNTIQLYREDLADSDWS 186
Query: 288 TMRLDSIRSN 297
+ D++ S+
Sbjct: 187 SF--DTLASH 194
Score = 115 (45.5 bits), Expect = 0.00068, P = 0.00068
Identities = 35/174 (20%), Positives = 76/174 (43%)
Query: 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166
+ V+W +L + + D+ + IW+ + + + ++ H+ +V + ++P +E +LA
Sbjct: 108 KSVSWSK-SGALLATCSRDKSVWIWEVAQEDEYECAAVLNTHSQDVKKVEWHP-NEDVLA 165
Query: 167 TGSADKTVALW--DLRNLKLK-LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDL 223
+ S D T+ L+ DL + + SH ++ + + LAS D+ + +W
Sbjct: 166 SASYDNTIQLYREDLADSDWSSFDTLASHDSTVWSIAFDASGSR-LASCSDDQTVRIWQE 224
Query: 224 SKIGEEQSTEDAEDGPPE---LLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 274
K G E + P + + G H+ + D SW + + +D +
Sbjct: 225 YKPGNEFGVACPDGKTPVWKCVCTLSGFHSRAVYDISWCKKTGLIATACGDDMV 278
>UNIPROTKB|K7GKX8 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GeneTree:ENSGT00570000079069
InterPro:IPR022052 Pfam:PF12265 EMBL:CU463287
Ensembl:ENSSSCT00000032853 Uniprot:K7GKX8
Length = 254
Score = 145 (56.1 bits), Expect = 5.7e-11, Sum P(2) = 5.7e-11
Identities = 26/31 (83%), Positives = 29/31 (93%)
Query: 46 FDDAVEERVINEEYKIWKKNTPFLYDLVVNN 76
F+D VEERVINEEYKIWKKNTPFLYDLV+ +
Sbjct: 51 FEDTVEERVINEEYKIWKKNTPFLYDLVMTH 81
Score = 68 (29.0 bits), Expect = 5.7e-11, Sum P(2) = 5.7e-11
Identities = 20/83 (24%), Positives = 39/83 (46%)
Query: 191 SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHT 250
+H+ E+ + ++ P N I+A+ + V+D +K + + + P+L GH
Sbjct: 165 NHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTK--HPAKPDPSGECNPDLRL--RGHQ 220
Query: 251 AKISDFSWNPNEPWVICSVSEDN 273
+ SWN N + S S+D+
Sbjct: 221 KEGYGLSWNSNLSGHLLSASDDH 243
Score = 63 (27.2 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 19/86 (22%), Positives = 36/86 (41%)
Query: 148 HTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHS---------FESHKDEIFQ 198
H EVN + P + +I+AT + V ++D K H+ E +
Sbjct: 166 HEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYG 225
Query: 199 VQWSPHNETILASSGTDRRLHVWDLS 224
+ W+ + L S+ D + +WD++
Sbjct: 226 LSWNSNLSGHLLSASDDHTVCLWDIN 251
Score = 52 (23.4 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 14/39 (35%), Positives = 18/39 (46%)
Query: 141 PSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDL 179
P + H E LS+N L + S D TV LWD+
Sbjct: 212 PDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDI 250
>DICTYBASE|DDB_G0267382 [details] [associations]
symbol:corA "coronin" species:44689 "Dictyostelium
discoideum" [GO:0001891 "phagocytic cup" evidence=IBA;IDA]
[GO:0006909 "phagocytosis" evidence=IEP] [GO:0030863 "cortical
cytoskeleton" evidence=IDA] [GO:0031982 "vesicle" evidence=IDA]
[GO:0045335 "phagocytic vesicle" evidence=IDA] [GO:0009617
"response to bacterium" evidence=IEP] [GO:0006972 "hyperosmotic
response" evidence=IEP] [GO:0005885 "Arp2/3 protein complex"
evidence=ISS] [GO:0051126 "negative regulation of actin nucleation"
evidence=ISS] [GO:0007015 "actin filament organization"
evidence=ISS] [GO:0006897 "endocytosis" evidence=TAS] [GO:0051707
"response to other organism" evidence=TAS] [GO:0015629 "actin
cytoskeleton" evidence=IDA] [GO:0051015 "actin filament binding"
evidence=IDA] [GO:0042995 "cell projection" evidence=IDA]
[GO:0051286 "cell tip" evidence=IDA] [GO:0043327 "chemotaxis to
cAMP" evidence=IMP] [GO:0006928 "cellular component movement"
evidence=IMP] [GO:0005938 "cell cortex" evidence=IDA] [GO:0000910
"cytokinesis" evidence=IMP] [GO:0030864 "cortical actin
cytoskeleton" evidence=IBA] [GO:0030835 "negative regulation of
actin filament depolymerization" evidence=IBA] [GO:0003779 "actin
binding" evidence=IEA] [GO:0009986 "cell surface" evidence=IEA]
[GO:0060187 "cell pole" evidence=IDA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0267382 GO:GO:0009986
GenomeReviews:CM000150_GR GO:GO:0045335 GO:GO:0009617 GO:GO:0007015
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006909 GO:GO:0051015
EMBL:AAFI02000003 GO:GO:0006928 GO:GO:0006972 GO:GO:0000910
GO:GO:0042995 GO:GO:0001891 GO:GO:0030864 GO:GO:0051126
GO:GO:0030835 InterPro:IPR015505 InterPro:IPR015048
InterPro:IPR015049 PANTHER:PTHR10856 Pfam:PF08953 Pfam:PF08954
EMBL:X61480 PIR:S18663 RefSeq:XP_647343.1 ProteinModelPortal:P27133
STRING:P27133 EnsemblProtists:DDB0191115 GeneID:8616153
KEGG:ddi:DDB_G0267382 OMA:PVLDIKW ProtClustDB:CLSZ2431531
Uniprot:P27133
Length = 445
Score = 179 (68.1 bits), Expect = 8.3e-11, P = 8.3e-11
Identities = 38/119 (31%), Positives = 65/119 (54%)
Query: 108 DVAWHLLHESLFGSVADDQKLMIWDTR----SHNVSKPSHTVDAHTAEVNCLSFNPYSEY 163
D+A+H +E+L GSV++D + IW + ++S P T+ H +V +SFNP ++
Sbjct: 84 DIAFHPFNENLVGSVSEDCNICIWGIPEGGLTDSISTPLQTLSGHKRKVGTISFNPVADN 143
Query: 164 ILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWD 222
+ T S D V WD+ K L + E H D I +W+ HN + + ++ D++ V+D
Sbjct: 144 VAVTSSGDFLVKTWDVEQGK-NLTTVEGHSDMITSCEWN-HNGSQIVTTCKDKKARVFD 200
>UNIPROTKB|Q17GR9 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7159 "Aedes aegypti" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 EMBL:CH477256
RefSeq:XP_001662680.1 UniGene:Aae.8569 ProteinModelPortal:Q17GR9
STRING:Q17GR9 EnsemblMetazoa:AAEL002912-RA GeneID:5576487
KEGG:aag:AaeL_AAEL002912 VectorBase:AAEL002912 HOGENOM:HOG000208901
OMA:SWKCVCT OrthoDB:EOG45DV4X PhylomeDB:Q17GR9 Uniprot:Q17GR9
Length = 337
Score = 176 (67.0 bits), Expect = 8.6e-11, P = 8.6e-11
Identities = 49/179 (27%), Positives = 91/179 (50%)
Query: 111 WHLLHESLFGSVADDQKLMIW--DTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATG 168
WH ++ + +D+ + IW D V+K + D H+ + ++++P +Y LA+
Sbjct: 22 WHP-KGNVLATCGEDKTIRIWAEDASQRWVAKTVLS-DGHSRTIRDVAWSPCGQY-LASA 78
Query: 169 SADKTVALWDLRNLKLKLHS-FESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIG 227
S D TVA+WD ++ + + ++ E H++E+ V WS ++LA+ D+ + VW+ +
Sbjct: 79 SFDATVAIWDKKSGEFECNATLEGHENEVKSVSWSKSG-SLLATCSRDKSVWVWE---VA 134
Query: 228 EEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYC-DSTDSD 285
+E E A + HT + W+P+E ++ S S DN ++ Y D DSD
Sbjct: 135 QEDEYECAA--------VLNTHTQDVKKVEWHPHED-ILASASYDNTIKLYKEDLADSD 184
Score = 125 (49.1 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 35/157 (22%), Positives = 73/157 (46%)
Query: 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166
+ V+W SL + + D+ + +W+ + + + ++ HT +V + ++P+ + ILA
Sbjct: 108 KSVSWSK-SGSLLATCSRDKSVWVWEVAQEDEYECAAVLNTHTQDVKKVEWHPHED-ILA 165
Query: 167 TGSADKTVALW--DLRNLKLK-LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDL 223
+ S D T+ L+ DL + + SH+ ++ + + LAS D+ + +W
Sbjct: 166 SASYDNTIKLYKEDLADSDWSSFDTLVSHESTVWSISFDGSGNR-LASCSDDQTVKIWQE 224
Query: 224 SKIGEEQSTEDAEDGPPE--LLFIHGGHTAKISDFSW 258
K G E ++ P + + G H+ + D SW
Sbjct: 225 YKPGNEFGVSCPDNTPVWKCVCTLAGYHSRSVYDISW 261
>UNIPROTKB|B3NQR5 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7220 "Drosophila erecta"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH954179 OrthoDB:EOG45DV4X RefSeq:XP_001975575.1
ProteinModelPortal:B3NQR5 EnsemblMetazoa:FBtr0142445 GeneID:6549053
KEGG:der:Dere_GG22391 FlyBase:FBgn0114563 Uniprot:B3NQR5
Length = 335
Score = 175 (66.7 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 46/179 (25%), Positives = 87/179 (48%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATG 168
VAWH ++F S +D+ + IW S + D H + + ++P +Y LA+
Sbjct: 20 VAWHP-KGNVFASCGEDKAIRIWSLTGSTWSTKTILSDGHKRTIREIRWSPCGQY-LASA 77
Query: 169 SADKTVALWDLRNLKLKLHS-FESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIG 227
S D T A+W + + + ++ E H++E+ V WS + +LA+ D+ + +W+++ G
Sbjct: 78 SFDATTAIWSKSSGEFECNATLEGHENEVKSVSWS-RSGGLLATCSRDKSVWIWEVA--G 134
Query: 228 EEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYC-DSTDSD 285
+++ E + HT + W+P + V+ S S DN ++ Y D D+D
Sbjct: 135 DDEF---------ECAAVLNSHTQDVKRVVWHPTKE-VLASASYDNTIKMYAEDPVDND 183
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 173 (66.0 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 45/137 (32%), Positives = 71/137 (51%)
Query: 104 LSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEY 163
L DVAW +L S +DD+ L IWD S K T+ H+ V C +FNP S
Sbjct: 62 LGISDVAWSS-DSNLLVSASDDKTLKIWDVSSGKCLK---TLKGHSNYVFCCNFNPQSNL 117
Query: 164 ILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDL 223
I++ GS D++V +WD++ K L + +H D + V ++ + +++ SS D +WD
Sbjct: 118 IVS-GSFDESVRIWDVKTGKC-LKTLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDT 174
Query: 224 SKIGEEQSTEDAEDGPP 240
+ G+ T +D PP
Sbjct: 175 AS-GQCLKTLIDDDNPP 190
Score = 125 (49.1 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 28/81 (34%), Positives = 45/81 (55%)
Query: 144 TVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSP 203
T+ HT V+ + F+P E+ LA+ SADK + +W + K + + HK I V WS
Sbjct: 14 TLAGHTKAVSSVKFSPNGEW-LASSSADKLIKIWGAYDGKFE-KTISGHKLGISDVAWSS 71
Query: 204 HNETILASSGTDRRLHVWDLS 224
+ +L S+ D+ L +WD+S
Sbjct: 72 -DSNLLVSASDDKTLKIWDVS 91
>UNIPROTKB|B4GDM7 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7234 "Drosophila persimilis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH479181 OrthoDB:EOG45DV4X RefSeq:XP_002015794.1
ProteinModelPortal:B4GDM7 GeneID:6591258 KEGG:dpe:Dper_GL10827
FlyBase:FBgn0148437 Uniprot:B4GDM7
Length = 335
Score = 174 (66.3 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 44/179 (24%), Positives = 89/179 (49%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATG 168
VAWH ++F S +D+ + +W + S + D H + + ++P +Y LA+
Sbjct: 20 VAWHP-KGNVFASCGEDKAIRVWSLSGNTWSTKTILSDGHKRTIREIRWSPCGQY-LASA 77
Query: 169 SADKTVALWDLRNLKLKLHS-FESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIG 227
S D T A+W + + + ++ E H++E+ V WS + +LA+ D+ + +W+++ G
Sbjct: 78 SFDATTAIWSKSSGEFECNATLEGHENEVKSVSWS-RSGGLLATCSRDKSVWIWEVA--G 134
Query: 228 EEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDST-DSD 285
+++ E + HT + W+P + ++ S S DN ++ + +S DSD
Sbjct: 135 DDEF---------ECAAVLNAHTQDVKRVVWHPTKD-ILASASYDNTIKMFAESQLDSD 183
>UNIPROTKB|Q292E8 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:46245 "Drosophila pseudoobscura
pseudoobscura" [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CM000071 GenomeReviews:CM000071_GR OMA:SWKCVCT
OrthoDB:EOG45DV4X HSSP:P63005 RefSeq:XP_001360339.1
ProteinModelPortal:Q292E8 GeneID:4803656 KEGG:dpo:Dpse_GA11817
FlyBase:FBgn0071866 InParanoid:Q292E8 Uniprot:Q292E8
Length = 335
Score = 174 (66.3 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 44/179 (24%), Positives = 89/179 (49%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATG 168
VAWH ++F S +D+ + +W + S + D H + + ++P +Y LA+
Sbjct: 20 VAWHP-KGNVFASCGEDKAIRVWSLSGNTWSTKTILSDGHKRTIREIRWSPCGQY-LASA 77
Query: 169 SADKTVALWDLRNLKLKLHS-FESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIG 227
S D T A+W + + + ++ E H++E+ V WS + +LA+ D+ + +W+++ G
Sbjct: 78 SFDATTAIWSKSSGEFECNATLEGHENEVKSVSWS-RSGGLLATCSRDKSVWIWEVA--G 134
Query: 228 EEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDST-DSD 285
+++ E + HT + W+P + ++ S S DN ++ + +S DSD
Sbjct: 135 DDEF---------ECAAVLNAHTQDVKRVVWHPTKD-ILASASYDNTIKMFAESQLDSD 183
>ZFIN|ZDB-GENE-030131-5987 [details] [associations]
symbol:taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:7955
"Danio rerio" [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-5987
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OrthoDB:EOG4NCMCF EMBL:BC056820
IPI:IPI00498551 RefSeq:NP_956146.1 UniGene:Dr.80603
ProteinModelPortal:Q6PGV3 STRING:Q6PGV3 GeneID:334055
KEGG:dre:334055 InParanoid:Q6PGV3 NextBio:20810247
ArrayExpress:Q6PGV3 Uniprot:Q6PGV3
Length = 601
Score = 179 (68.1 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 56/187 (29%), Positives = 90/187 (48%)
Query: 91 FFEIIFTQNFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWD-TRSHNVSKPSHTVDAHT 149
F + + +P+ DV+ L+ F + + D+ +W R++ P H
Sbjct: 386 FTNTVLYRGHAYPVWDVDVSPCSLY---FSTASHDRTARLWSFARTY----PLRLYAGHL 438
Query: 150 AEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETIL 209
++V+C+ F+P S YI ATGS DKTV LW R + F H+ + + +SP N L
Sbjct: 439 SDVDCVKFHPNSNYI-ATGSTDKTVRLWSTRQ-GASVRLFTGHRGPVLTLAFSP-NGKYL 495
Query: 210 ASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSV 269
AS+G D+RL +WDL+ G +D GHT IS S++ + ++ S
Sbjct: 496 ASAGEDQRLKLWDLASGG---LFKDLR-----------GHTDTISSLSFSQDSS-LVASA 540
Query: 270 SEDNIMQ 276
S DN ++
Sbjct: 541 SMDNTVR 547
Score = 118 (46.6 bits), Expect = 0.00078, P = 0.00078
Identities = 35/129 (27%), Positives = 59/129 (45%)
Query: 125 DQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKL 184
D+ + +W TR S T H V L+F+P +Y+ + G D+ + LWDL + L
Sbjct: 459 DKTVRLWSTRQ-GASVRLFT--GHRGPVLTLAFSPNGKYLASAGE-DQRLKLWDLASGGL 514
Query: 185 KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLF 244
H D I + +S + +++AS+ D + VWD+ T+ EL+
Sbjct: 515 -FKDLRGHTDTISSLSFS-QDSSLVASASMDNTVRVWDIRNAHGSAPTDGCSS---ELIG 569
Query: 245 IHGGHTAKI 253
+ G T+ I
Sbjct: 570 QYTGSTSNI 578
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 173 (66.0 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 45/137 (32%), Positives = 71/137 (51%)
Query: 104 LSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEY 163
L DVAW +L S +DD+ L IWD S K T+ H+ V C +FNP S
Sbjct: 88 LGISDVAWSS-DSNLLVSASDDKTLKIWDVSSGKCLK---TLKGHSNYVFCCNFNPQSNL 143
Query: 164 ILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDL 223
I++ GS D++V +WD++ K L + +H D + V ++ + +++ SS D +WD
Sbjct: 144 IVS-GSFDESVRIWDVKTGKC-LKTLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDT 200
Query: 224 SKIGEEQSTEDAEDGPP 240
+ G+ T +D PP
Sbjct: 201 AS-GQCLKTLIDDDNPP 216
Score = 126 (49.4 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 30/89 (33%), Positives = 49/89 (55%)
Query: 140 KPSHTVD----AHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDE 195
KP++T+ HT V+ + F+P E+ LA+ SADK + +W + K + + HK
Sbjct: 32 KPNYTLKFTLAGHTKAVSSVKFSPNGEW-LASSSADKLIKIWGAYDGKFE-KTISGHKLG 89
Query: 196 IFQVQWSPHNETILASSGTDRRLHVWDLS 224
I V WS + +L S+ D+ L +WD+S
Sbjct: 90 ISDVAWSS-DSNLLVSASDDKTLKIWDVS 117
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 173 (66.0 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 45/137 (32%), Positives = 71/137 (51%)
Query: 104 LSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEY 163
L DVAW +L S +DD+ L IWD S K T+ H+ V C +FNP S
Sbjct: 88 LGISDVAWSS-DSNLLVSASDDKTLKIWDVSSGKCLK---TLKGHSNYVFCCNFNPQSNL 143
Query: 164 ILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDL 223
I++ GS D++V +WD++ K L + +H D + V ++ + +++ SS D +WD
Sbjct: 144 IVS-GSFDESVRIWDVKTGKC-LKTLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDT 200
Query: 224 SKIGEEQSTEDAEDGPP 240
+ G+ T +D PP
Sbjct: 201 AS-GQCLKTLIDDDNPP 216
Score = 125 (49.1 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 28/81 (34%), Positives = 45/81 (55%)
Query: 144 TVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSP 203
T+ HT V+ + F+P E+ LA+ SADK + +W + K + + HK I V WS
Sbjct: 40 TLAGHTKAVSSVKFSPNGEW-LASSSADKLIKIWGAYDGKFE-KTISGHKLGISDVAWSS 97
Query: 204 HNETILASSGTDRRLHVWDLS 224
+ +L S+ D+ L +WD+S
Sbjct: 98 -DSNLLVSASDDKTLKIWDVS 117
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 173 (66.0 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 45/137 (32%), Positives = 71/137 (51%)
Query: 104 LSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEY 163
L DVAW +L S +DD+ L IWD S K T+ H+ V C +FNP S
Sbjct: 88 LGISDVAWSS-DSNLLVSASDDKTLKIWDVSSGKCLK---TLKGHSNYVFCCNFNPQSNL 143
Query: 164 ILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDL 223
I++ GS D++V +WD++ K L + +H D + V ++ + +++ SS D +WD
Sbjct: 144 IVS-GSFDESVRIWDVKTGKC-LKTLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDT 200
Query: 224 SKIGEEQSTEDAEDGPP 240
+ G+ T +D PP
Sbjct: 201 AS-GQCLKTLIDDDNPP 216
Score = 125 (49.1 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 28/81 (34%), Positives = 45/81 (55%)
Query: 144 TVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSP 203
T+ HT V+ + F+P E+ LA+ SADK + +W + K + + HK I V WS
Sbjct: 40 TLAGHTKAVSSVKFSPNGEW-LASSSADKLIKIWGAYDGKFE-KTISGHKLGISDVAWSS 97
Query: 204 HNETILASSGTDRRLHVWDLS 224
+ +L S+ D+ L +WD+S
Sbjct: 98 -DSNLLVSASDDKTLKIWDVS 117
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 173 (66.0 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 45/137 (32%), Positives = 71/137 (51%)
Query: 104 LSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEY 163
L DVAW +L S +DD+ L IWD S K T+ H+ V C +FNP S
Sbjct: 88 LGISDVAWSS-DSNLLVSASDDKTLKIWDVSSGKCLK---TLKGHSNYVFCCNFNPQSNL 143
Query: 164 ILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDL 223
I++ GS D++V +WD++ K L + +H D + V ++ + +++ SS D +WD
Sbjct: 144 IVS-GSFDESVRIWDVKTGKC-LKTLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDT 200
Query: 224 SKIGEEQSTEDAEDGPP 240
+ G+ T +D PP
Sbjct: 201 AS-GQCLKTLIDDDNPP 216
Score = 125 (49.1 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 28/81 (34%), Positives = 45/81 (55%)
Query: 144 TVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSP 203
T+ HT V+ + F+P E+ LA+ SADK + +W + K + + HK I V WS
Sbjct: 40 TLAGHTKAVSSVKFSPNGEW-LASSSADKLIKIWGAYDGKFE-KTISGHKLGISDVAWSS 97
Query: 204 HNETILASSGTDRRLHVWDLS 224
+ +L S+ D+ L +WD+S
Sbjct: 98 -DSNLLVSASDDKTLKIWDVS 117
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 173 (66.0 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 45/137 (32%), Positives = 71/137 (51%)
Query: 104 LSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEY 163
L DVAW +L S +DD+ L IWD S K T+ H+ V C +FNP S
Sbjct: 88 LGISDVAWSS-DSNLLVSASDDKTLKIWDVSSGKCLK---TLKGHSNYVFCCNFNPQSNL 143
Query: 164 ILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDL 223
I++ GS D++V +WD++ K L + +H D + V ++ + +++ SS D +WD
Sbjct: 144 IVS-GSFDESVRIWDVKTGKC-LKTLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDT 200
Query: 224 SKIGEEQSTEDAEDGPP 240
+ G+ T +D PP
Sbjct: 201 AS-GQCLKTLIDDDNPP 216
Score = 125 (49.1 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 28/81 (34%), Positives = 45/81 (55%)
Query: 144 TVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSP 203
T+ HT V+ + F+P E+ LA+ SADK + +W + K + + HK I V WS
Sbjct: 40 TLAGHTKAVSSVKFSPNGEW-LASSSADKLIKIWGAYDGKFE-KTISGHKLGISDVAWSS 97
Query: 204 HNETILASSGTDRRLHVWDLS 224
+ +L S+ D+ L +WD+S
Sbjct: 98 -DSNLLVSASDDKTLKIWDVS 117
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 173 (66.0 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 45/137 (32%), Positives = 71/137 (51%)
Query: 104 LSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEY 163
L DVAW +L S +DD+ L IWD S K T+ H+ V C +FNP S
Sbjct: 88 LGISDVAWSS-DSNLLVSASDDKTLKIWDVSSGKCLK---TLKGHSNYVFCCNFNPQSNL 143
Query: 164 ILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDL 223
I++ GS D++V +WD++ K L + +H D + V ++ + +++ SS D +WD
Sbjct: 144 IVS-GSFDESVRIWDVKTGKC-LKTLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDT 200
Query: 224 SKIGEEQSTEDAEDGPP 240
+ G+ T +D PP
Sbjct: 201 AS-GQCLKTLIDDDNPP 216
Score = 125 (49.1 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 28/81 (34%), Positives = 45/81 (55%)
Query: 144 TVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSP 203
T+ HT V+ + F+P E+ LA+ SADK + +W + K + + HK I V WS
Sbjct: 40 TLAGHTKAVSSVKFSPNGEW-LASSSADKLIKIWGAYDGKFE-KTISGHKLGISDVAWSS 97
Query: 204 HNETILASSGTDRRLHVWDLS 224
+ +L S+ D+ L +WD+S
Sbjct: 98 -DSNLLVSASDDKTLKIWDVS 117
>UNIPROTKB|B4P7Q3 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7245 "Drosophila yakuba"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CM000158 OrthoDB:EOG45DV4X RefSeq:XP_002091367.1
ProteinModelPortal:B4P7Q3 STRING:B4P7Q3 EnsemblMetazoa:FBtr0258798
GeneID:6530451 KEGG:dya:Dyak_GE12280 FlyBase:FBgn0230036
Uniprot:B4P7Q3
Length = 335
Score = 173 (66.0 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 44/179 (24%), Positives = 88/179 (49%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATG 168
VAWH ++F S +D+ + IW + S + D H + + ++P +Y LA+
Sbjct: 20 VAWHP-KGNVFASCGEDKAIRIWSLTGNTWSTKTILSDGHKRTIREIQWSPCGQY-LASA 77
Query: 169 SADKTVALWDLRNLKLKLHS-FESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIG 227
S D T A+W + + + ++ E H++E+ V WS + +LA+ D+ + +W+++ G
Sbjct: 78 SFDATTAIWSKSSGEFECNATLEGHENEVKSVSWS-RSGGLLATCSRDKSVWIWEVA--G 134
Query: 228 EEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDST-DSD 285
+++ E + HT + W+P + ++ S S DN ++ Y + D+D
Sbjct: 135 DDEF---------ECAAVLNSHTQDVKRVVWHPTKE-ILASASYDNTIKMYAEEPIDND 183
>FB|FBgn0039601 [details] [associations]
symbol:CG1523 species:7227 "Drosophila melanogaster"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GeneTree:ENSGT00390000012666 KO:K11802 EMBL:AY051986
RefSeq:NP_651635.2 ProteinModelPortal:Q9VAT2 SMR:Q9VAT2
IntAct:Q9VAT2 MINT:MINT-1763791 PaxDb:Q9VAT2 PRIDE:Q9VAT2
EnsemblMetazoa:FBtr0085355 GeneID:43400 KEGG:dme:Dmel_CG1523
UCSC:CG1523-RA FlyBase:FBgn0039601 InParanoid:Q9VAT2 OMA:DGSIFTW
OrthoDB:EOG4H9W1P GenomeRNAi:43400 NextBio:833737 Bgee:Q9VAT2
Uniprot:Q9VAT2
Length = 621
Score = 178 (67.7 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 36/84 (42%), Positives = 52/84 (61%)
Query: 146 DAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHN 205
DAHT VNC+ F + E + ATGS D TVALWDLRN+K KL H + + +++S +
Sbjct: 88 DAHTDSVNCIKF--FDERLFATGSDDFTVALWDLRNMKQKLRVLHGHSNWVKNIEYSSKD 145
Query: 206 ETILASSGTDRRLHVWDLSKIGEE 229
+ +L SSG D + WD++ E+
Sbjct: 146 K-LLVSSGFDGSIFTWDINSQTEQ 168
>UNIPROTKB|B4MY77 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7260 "Drosophila willistoni"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 OMA:SWKCVCT OrthoDB:EOG45DV4X EMBL:CH963894
RefSeq:XP_002066080.1 ProteinModelPortal:B4MY77 STRING:B4MY77
EnsemblMetazoa:FBtr0252775 GeneID:6643305 KEGG:dwi:Dwil_GK22124
FlyBase:FBgn0224109 InParanoid:B4MY77 Uniprot:B4MY77
Length = 335
Score = 172 (65.6 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 45/179 (25%), Positives = 88/179 (49%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATG 168
VAWH + F S +D+ + IW ++ S + D H + + ++P +Y LA+
Sbjct: 20 VAWHPKGNT-FASCGEDKAIRIWSLSGNSWSTKTILSDGHKRTIREIRWSPCGQY-LASA 77
Query: 169 SADKTVALWDLRNLKLKLHS-FESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIG 227
S D T A+W + + + ++ E H++E+ V WS +LA+ D+ + +W+++ G
Sbjct: 78 SFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSKSGG-LLATCSRDKSVWIWEVA--G 134
Query: 228 EEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDST-DSD 285
+++ E + HT + W+P + ++ S S DN ++ + +S DSD
Sbjct: 135 DDEF---------ECAAVLNPHTQDVKRVVWHPTKE-ILASASYDNTIKMFAESALDSD 183
>ZFIN|ZDB-GENE-070410-134 [details] [associations]
symbol:rfwd2 "ring finger and WD repeat domain 2"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089
PROSITE:PS50294 SMART:SM00184 SMART:SM00320 Prosite:PS00518
ZFIN:ZDB-GENE-070410-134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270
eggNOG:COG2319 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOGENOM:HOG000006123 KO:K10143 CTD:64326
HOVERGEN:HBG054995 OrthoDB:EOG4M0F18 EMBL:BC139708 IPI:IPI00851801
RefSeq:NP_001083011.1 UniGene:Dr.159867 ProteinModelPortal:A4QP94
STRING:A4QP94 GeneID:100037391 KEGG:dre:100037391 NextBio:20788550
Uniprot:A4QP94
Length = 694
Score = 161 (61.7 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 39/117 (33%), Positives = 64/117 (54%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATG 168
V ++L+ L S +DD K+ +W T N+ +++A A V C+ F+P S Y LA G
Sbjct: 482 VDFNLMDPKLLASGSDDAKVKLWST---NLDNSVASIEAK-ANVCCVKFSPTSRYHLAFG 537
Query: 169 SADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 225
AD V +DLRN K + F+ H+ + ++ E + AS TD +L +W+++K
Sbjct: 538 CADHCVHYYDLRNAKQPIMVFKGHRKAVSYAKFVNGGEIVSAS--TDSQLKLWNVNK 592
Score = 62 (26.9 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 21/88 (23%), Positives = 37/88 (42%)
Query: 209 LASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICS 268
+ S+ TD +L +W+++K P L GH + + N +V C
Sbjct: 576 IVSASTDSQLKLWNVNK--------------PHCLRSFKGHINEKNFVGLASNGDYVACG 621
Query: 269 VSEDNIMQEYCDSTDSDTKTMRLDSIRS 296
SE+N + YC T + D+++S
Sbjct: 622 -SENNSLYLYCKGLSKTLLTFKFDTVKS 648
>UNIPROTKB|Q08DL6 [details] [associations]
symbol:PEX7 "Peroxisomal biogenesis factor 7" species:9913
"Bos taurus" [GO:0008611 "ether lipid biosynthetic process"
evidence=ISS] [GO:0016558 "protein import into peroxisome matrix"
evidence=ISS] [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005782 "peroxisomal matrix"
evidence=IEA] [GO:0001958 "endochondral ossification" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 GO:GO:0001764
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006635 GO:GO:0005782 GO:GO:0008611 GO:GO:0016558
GO:GO:0001958 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 GeneTree:ENSGT00700000104578
OrthoDB:EOG483D4V EMBL:DAAA02026741 EMBL:BC123679 IPI:IPI00715205
RefSeq:NP_001070358.1 UniGene:Bt.17803 STRING:Q08DL6
Ensembl:ENSBTAT00000022338 GeneID:533077 KEGG:bta:533077
InParanoid:Q08DL6 NextBio:20875902 Uniprot:Q08DL6
Length = 323
Score = 171 (65.3 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 39/121 (32%), Positives = 59/121 (48%)
Query: 108 DVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPY-SEYILA 166
DV W +E + + + D L +WDT + P HT EV + ++ E ++
Sbjct: 72 DVTWSENNEHVLVTCSGDGSLQLWDTA--RATGPLQVFKEHTQEVYSVDWSQTRGEQLVV 129
Query: 167 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
+GS D+TV LWD + L +F H+ I+ WSPH ASS D+ L +WD+
Sbjct: 130 SGSWDQTVKLWD-PTVGKSLCTFRGHESVIYSTIWSPHIPGCFASSSGDQTLRIWDVKTT 188
Query: 227 G 227
G
Sbjct: 189 G 189
Score = 159 (61.0 bits), Expect = 6.7e-09, P = 6.7e-09
Identities = 36/107 (33%), Positives = 58/107 (54%)
Query: 119 FGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWD 178
F S + DQ L IWD ++ V V AH AE+ + Y+E ++ TG+ D ++ WD
Sbjct: 171 FASSSGDQTLRIWDVKTTGVRI---VVPAHQAEILSCDWCKYNENLVVTGAVDCSLRGWD 227
Query: 179 LRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 225
LRN++ + H I +V++SP + ++LAS D + W+ SK
Sbjct: 228 LRNVQQPVFELLGHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSK 274
Score = 134 (52.2 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 42/157 (26%), Positives = 70/157 (44%)
Query: 116 ESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVA 175
E L S + DQ + +WD V K T H + + ++P+ A+ S D+T+
Sbjct: 125 EQLVVSGSWDQTVKLWDP---TVGKSLCTFRGHESVIYSTIWSPHIPGCFASSSGDQTLR 181
Query: 176 LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDA 235
+WD++ +++ +H+ EI W +NE ++ + D L WDL + +Q
Sbjct: 182 IWDVKTTGVRI-VVPAHQAEILSCDWCKYNENLVVTGAVDCSLRGWDLRNV--QQPVF-- 236
Query: 236 EDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED 272
ELL GHT I ++P V+ S S D
Sbjct: 237 -----ELL----GHTYAIRRVKFSPFHASVLASCSYD 264
Score = 116 (45.9 bits), Expect = 0.00048, P = 0.00048
Identities = 32/123 (26%), Positives = 57/123 (46%)
Query: 155 LSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSP-HNETILASSG 213
++++ +E++L T S D ++ LWD L F+ H E++ V WS E ++ S
Sbjct: 73 VTWSENNEHVLVTCSGDGSLQLWDTARATGPLQVFKEHTQEVYSVDWSQTRGEQLVVSGS 132
Query: 214 TDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
D+ + +WD + +G+ T F GH + I W+P+ P S S D
Sbjct: 133 WDQTVKLWDPT-VGKSLCT-----------F--RGHESVIYSTIWSPHIPGCFASSSGDQ 178
Query: 274 IMQ 276
++
Sbjct: 179 TLR 181
>UNIPROTKB|E2QYX6 [details] [associations]
symbol:PEX7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0008611 "ether lipid biosynthetic process" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005782 "peroxisomal matrix"
evidence=IEA] [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=IEA] [GO:0001958 "endochondral ossification"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0001764 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782 GO:GO:0008611
GO:GO:0016558 GO:GO:0001958 KO:K13341 OMA:GHEYAVR CTD:5191
GO:GO:0005053 GeneTree:ENSGT00700000104578 EMBL:AAEX03000193
RefSeq:XP_541117.2 Ensembl:ENSCAFT00000000399 GeneID:484000
KEGG:cfa:484000 NextBio:20858274 Uniprot:E2QYX6
Length = 323
Score = 170 (64.9 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 38/121 (31%), Positives = 59/121 (48%)
Query: 108 DVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPY-SEYILA 166
DV W +E + + + D L +WDT + P HT EV + ++ E ++
Sbjct: 72 DVTWSENNEHILVTCSGDGSLQLWDTAK--ATGPLQVYKEHTQEVYSVDWSQTRGEQLVV 129
Query: 167 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
+GS D+TV LWD + L +F H+ I+ WSPH AS+ D+ L +WD+
Sbjct: 130 SGSWDQTVKLWD-PTVGKSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLRIWDVKST 188
Query: 227 G 227
G
Sbjct: 189 G 189
Score = 168 (64.2 bits), Expect = 6.2e-10, P = 6.2e-10
Identities = 38/107 (35%), Positives = 58/107 (54%)
Query: 119 FGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWD 178
F S + DQ L IWD +S V V AH AE+ + Y+E +L TG+ D ++ WD
Sbjct: 171 FASASGDQTLRIWDVKSTGVRI---VVPAHQAEILSCDWCKYNENLLVTGAVDCSLRGWD 227
Query: 179 LRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 225
LRN++ + H I +V++SP + ++LAS D + W+ SK
Sbjct: 228 LRNVRQPVFELLGHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSK 274
Score = 137 (53.3 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 42/157 (26%), Positives = 70/157 (44%)
Query: 116 ESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVA 175
E L S + DQ + +WD V K T H + + ++P+ A+ S D+T+
Sbjct: 125 EQLVVSGSWDQTVKLWDP---TVGKSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLR 181
Query: 176 LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDA 235
+WD+++ +++ +H+ EI W +NE +L + D L WDL + +
Sbjct: 182 IWDVKSTGVRI-VVPAHQAEILSCDWCKYNENLLVTGAVDCSLRGWDLRNVRQPVF---- 236
Query: 236 EDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED 272
ELL GHT I ++P V+ S S D
Sbjct: 237 -----ELL----GHTYAIRRVKFSPFHASVLASCSYD 264
Score = 116 (45.9 bits), Expect = 0.00048, P = 0.00048
Identities = 32/123 (26%), Positives = 57/123 (46%)
Query: 155 LSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSP-HNETILASSG 213
++++ +E+IL T S D ++ LWD L ++ H E++ V WS E ++ S
Sbjct: 73 VTWSENNEHILVTCSGDGSLQLWDTAKATGPLQVYKEHTQEVYSVDWSQTRGEQLVVSGS 132
Query: 214 TDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
D+ + +WD + +G+ T F GH + I W+P+ P S S D
Sbjct: 133 WDQTVKLWDPT-VGKSLCT-----------F--RGHESVIYSTIWSPHIPGCFASASGDQ 178
Query: 274 IMQ 276
++
Sbjct: 179 TLR 181
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 175 (66.7 bits), Expect = 3.8e-10, P = 3.8e-10
Identities = 43/133 (32%), Positives = 70/133 (52%)
Query: 115 HES-LFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKT 173
H+S L S +DD + IWDT + ++ HT++ H V + F+ S+ +LA+ S D T
Sbjct: 389 HDSQLLASASDDSTVKIWDTGTGSLQ---HTLEGHRDWVRSVIFSHDSQ-LLASASDDST 444
Query: 174 VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTE 233
V +WD L+ H+ E H+D + V +S H+ +LAS+ DR + +WD K + + E
Sbjct: 445 VKIWDTGTGSLQ-HTLEGHRDWVRSVIFS-HDSRLLASASDDRTVRIWDTEKGSHKHTLE 502
Query: 234 DAEDGPPELLFIH 246
+ F H
Sbjct: 503 GHSSLVTSVSFSH 515
Score = 171 (65.3 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 45/145 (31%), Positives = 75/145 (51%)
Query: 115 HES-LFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKT 173
H+S L S +DD+ + IWDT + ++ HT++ H+ V + F+ + +LA+ S D T
Sbjct: 306 HDSRLLASASDDRTVKIWDTETGSLQ---HTLEGHSDLVRSVIFS-HDSRLLASAS-DST 360
Query: 174 VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTE 233
V +WD L+ H+ E H+D + V +S H+ +LAS+ D + +WD + + E
Sbjct: 361 VKIWDTGTGSLQ-HTLEGHRDWVRSVIFS-HDSQLLASASDDSTVKIWDTGTGSLQHTLE 418
Query: 234 DAEDGPPELLFIHGGHT-AKISDFS 257
D ++F H A SD S
Sbjct: 419 GHRDWVRSVIFSHDSQLLASASDDS 443
Score = 163 (62.4 bits), Expect = 8.2e-09, P = 8.2e-09
Identities = 36/110 (32%), Positives = 61/110 (55%)
Query: 115 HES-LFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKT 173
H+S L S +DD + IWDT + ++ HT++ H V + F+ + +LA+ S D+T
Sbjct: 431 HDSQLLASASDDSTVKIWDTGTGSLQ---HTLEGHRDWVRSVIFS-HDSRLLASASDDRT 486
Query: 174 VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDL 223
V +WD K H+ E H + V +S H+ +LAS+ D+ + +WD+
Sbjct: 487 VRIWDTEKGSHK-HTLEGHSSLVTSVSFS-HDSRLLASASNDQTVRIWDI 534
Score = 126 (49.4 bits), Expect = 9.8e-05, P = 9.8e-05
Identities = 34/114 (29%), Positives = 58/114 (50%)
Query: 145 VDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPH 204
++ H A V +S++ + +LA+ S D+TV +WD L+ H+ E H D + V +S H
Sbjct: 292 LEGHEAAVLSVSYS-HDSRLLASASDDRTVKIWDTETGSLQ-HTLEGHSDLVRSVIFS-H 348
Query: 205 NETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHT-AKISDFS 257
+ +LAS+ +D + +WD + + E D ++F H A SD S
Sbjct: 349 DSRLLASA-SDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDS 401
Score = 124 (48.7 bits), Expect = 0.00016, P = 0.00016
Identities = 27/77 (35%), Positives = 46/77 (59%)
Query: 115 HES-LFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKT 173
H+S L S +DD+ + IWDT HT++ H++ V +SF+ + +LA+ S D+T
Sbjct: 473 HDSRLLASASDDRTVRIWDTEK---GSHKHTLEGHSSLVTSVSFS-HDSRLLASASNDQT 528
Query: 174 VALWDLRNLKLKLHSFE 190
V +WD+ L+ H+F+
Sbjct: 529 VRIWDIEARSLQ-HTFD 544
>UNIPROTKB|F1S845 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:ERQNNQI ProteinModelPortal:F1S845 Ensembl:ENSSSCT00000011591
Uniprot:F1S845
Length = 542
Score = 174 (66.3 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 44/119 (36%), Positives = 62/119 (52%)
Query: 119 FGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWD 178
F S D+ +W T + +P H A+VNC F+P S Y+ ATGSAD+TV LWD
Sbjct: 360 FVSGGHDRVARLWATDHY---QPLRIFAGHLADVNCTRFHPNSNYV-ATGSADRTVRLWD 415
Query: 179 LRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK---IGEEQSTED 234
+ N + F HK I + +SP N LA+ TD R+ +WD+ +GE + D
Sbjct: 416 VLNGNC-VRIFTGHKGPIHSLTFSP-NGRFLATGATDGRVLLWDIGHGLMVGELKGHTD 472
Score = 139 (54.0 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 32/113 (28%), Positives = 59/113 (52%)
Query: 125 DQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKL 184
D+ + +WD + N + H ++ L+F+P + LATG+ D V LWD+ + L
Sbjct: 408 DRTVRLWDVLNGNCVR---IFTGHKGPIHSLTFSPNGRF-LATGATDGRVLLWDIGH-GL 462
Query: 185 KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAED 237
+ + H D + +++S E ILAS D + +WD K E+ T+++++
Sbjct: 463 MVGELKGHTDTVCSLRFSRDGE-ILASGSMDNTVRLWDAVKAFEDLETDNSQE 514
>UNIPROTKB|E1BYP4 [details] [associations]
symbol:PEX7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001764 "neuron migration" evidence=IEA] [GO:0001958
"endochondral ossification" evidence=IEA] [GO:0005053 "peroxisome
matrix targeting signal-2 binding" evidence=IEA] [GO:0005782
"peroxisomal matrix" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006635 "fatty acid beta-oxidation" evidence=IEA]
[GO:0008611 "ether lipid biosynthetic process" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782
GO:GO:0008611 GO:GO:0016558 KO:K13341 OMA:GHEYAVR CTD:5191
GO:GO:0005053 GeneTree:ENSGT00700000104578 EMBL:AADN02025502
EMBL:AADN02025503 IPI:IPI00583820 RefSeq:XP_419724.3
UniGene:Gga.10547 ProteinModelPortal:E1BYP4
Ensembl:ENSGALT00000022499 GeneID:421687 KEGG:gga:421687
Uniprot:E1BYP4
Length = 321
Score = 169 (64.5 bits), Expect = 4.6e-10, P = 4.6e-10
Identities = 37/107 (34%), Positives = 57/107 (53%)
Query: 119 FGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWD 178
F S + DQ L IWD ++ V + AH AE+ + Y E +L TG+ D ++ WD
Sbjct: 169 FASASGDQTLRIWDVKAPGVRL---VIPAHQAEILSCDWCKYDENLLVTGAVDCSLKGWD 225
Query: 179 LRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 225
LRN++ + H + +V++SP + T+LAS D + WD SK
Sbjct: 226 LRNVRQPVFILLGHTYAVRRVKFSPFHATLLASCSYDFTVRFWDFSK 272
Score = 154 (59.3 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 39/135 (28%), Positives = 62/135 (45%)
Query: 94 IIFTQNFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVN 153
I+ ++F + DV W +E + + + D L IWD P HT E
Sbjct: 56 IVLLRSFDWNDGLFDVTWSENNEHVLITSSGDGSLQIWDIAKPK--GPLQVYKEHTQEAY 113
Query: 154 CLSFNPY-SEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASS 212
+ ++ E ++ +GS D+T LWD K L +F+ H+ I+ WSPH AS+
Sbjct: 114 SVDWSQTRGEQLVVSGSWDQTAKLWDPAVGK-SLRTFKGHEGVIYSTIWSPHIPGCFASA 172
Query: 213 GTDRRLHVWDLSKIG 227
D+ L +WD+ G
Sbjct: 173 SGDQTLRIWDVKAPG 187
Score = 129 (50.5 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 40/157 (25%), Positives = 68/157 (43%)
Query: 116 ESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVA 175
E L S + DQ +WD V K T H + ++P+ A+ S D+T+
Sbjct: 123 EQLVVSGSWDQTAKLWDPA---VGKSLRTFKGHEGVIYSTIWSPHIPGCFASASGDQTLR 179
Query: 176 LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDA 235
+WD++ ++L +H+ EI W ++E +L + D L WDL + +
Sbjct: 180 IWDVKAPGVRL-VIPAHQAEILSCDWCKYDENLLVTGAVDCSLKGWDLRNVRQ------- 231
Query: 236 EDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED 272
P +FI GHT + ++P ++ S S D
Sbjct: 232 ---P---VFILLGHTYAVRRVKFSPFHATLLASCSYD 262
Score = 115 (45.5 bits), Expect = 0.00062, P = 0.00062
Identities = 31/123 (25%), Positives = 56/123 (45%)
Query: 155 LSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSP-HNETILASSG 213
++++ +E++L T S D ++ +WD+ K L ++ H E + V WS E ++ S
Sbjct: 71 VTWSENNEHVLITSSGDGSLQIWDIAKPKGPLQVYKEHTQEAYSVDWSQTRGEQLVVSGS 130
Query: 214 TDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
D+ +WD + +G+ T F GH I W+P+ P S S D
Sbjct: 131 WDQTAKLWDPA-VGKSLRT-----------F--KGHEGVIYSTIWSPHIPGCFASASGDQ 176
Query: 274 IMQ 276
++
Sbjct: 177 TLR 179
>UNIPROTKB|B3MC74 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7217 "Drosophila ananassae"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CH902619 OrthoDB:EOG45DV4X RefSeq:XP_001959352.1
ProteinModelPortal:B3MC74 STRING:B3MC74 EnsemblMetazoa:FBtr0116785
GeneID:6494943 KEGG:dan:Dana_GF12085 FlyBase:FBgn0089124
InParanoid:B3MC74 Uniprot:B3MC74
Length = 335
Score = 169 (64.5 bits), Expect = 5.3e-10, P = 5.3e-10
Identities = 44/179 (24%), Positives = 89/179 (49%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATG 168
VAWH ++F S +D+ + IW + + + D H + + ++P +Y LA+
Sbjct: 20 VAWHP-KGNVFASCGEDKAIRIWSLNGNTWTTKTILSDGHKRTIREIRWSPCGQY-LASA 77
Query: 169 SADKTVALWDLRNLKLKLHS-FESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIG 227
S D T A+W + + + ++ E H++E+ V WS + +LA+ D+ + +W+++ G
Sbjct: 78 SFDGTTAIWSKSSGEFECNATLEGHENEVKSVSWS-RSGGLLATCSRDKSVWIWEVA--G 134
Query: 228 EEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYC-DSTDSD 285
+++ E + HT + W+P + ++ S S DN ++ + D+ DSD
Sbjct: 135 DDEF---------ECAAVLNPHTQDVKRVVWHPTKE-LLASASYDNTIKMFAEDALDSD 183
>UNIPROTKB|F1S687 [details] [associations]
symbol:PEX7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0008611 "ether lipid biosynthetic process" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005782 "peroxisomal matrix"
evidence=IEA] [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=IEA] [GO:0001958 "endochondral ossification"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0001764 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782 GO:GO:0008611
GO:GO:0016558 GO:GO:0001958 OMA:GHEYAVR GO:GO:0005053
GeneTree:ENSGT00700000104578 EMBL:CU407212
ProteinModelPortal:F1S687 Ensembl:ENSSSCT00000004599 Uniprot:F1S687
Length = 315
Score = 168 (64.2 bits), Expect = 5.7e-10, P = 5.7e-10
Identities = 38/121 (31%), Positives = 60/121 (49%)
Query: 108 DVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPY-SEYILA 166
DV W +E + + + D L +WDT + P HT EV + ++ E ++
Sbjct: 72 DVTWSENNEHVLVTCSGDGSLQLWDTAG--AAGPLQVYKEHTQEVYSVDWSQTRGEQLVV 129
Query: 167 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
+GS D+TV LWD + L +F+ H+ I+ WSPH AS+ D+ L +WD+
Sbjct: 130 SGSWDQTVKLWD-PTVGRSLCTFKGHESIIYSTIWSPHIPGCFASASGDQTLRIWDVKTT 188
Query: 227 G 227
G
Sbjct: 189 G 189
Score = 162 (62.1 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 37/107 (34%), Positives = 57/107 (53%)
Query: 119 FGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWD 178
F S + DQ L IWD ++ V V AH AE+ + Y+E +L TG+ D ++ WD
Sbjct: 171 FASASGDQTLRIWDVKTTGVRI---VVPAHQAEILSCDWCKYNENLLVTGAVDCSLRGWD 227
Query: 179 LRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 225
LRN++ + H I +V++SP ++LAS D + W+ SK
Sbjct: 228 LRNVRQPVFELLGHTYAIRRVKFSPFYASVLASCSYDFTVRFWNFSK 274
Score = 131 (51.2 bits), Expect = 9.5e-06, P = 9.5e-06
Identities = 41/157 (26%), Positives = 69/157 (43%)
Query: 116 ESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVA 175
E L S + DQ + +WD V + T H + + ++P+ A+ S D+T+
Sbjct: 125 EQLVVSGSWDQTVKLWDP---TVGRSLCTFKGHESIIYSTIWSPHIPGCFASASGDQTLR 181
Query: 176 LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDA 235
+WD++ +++ +H+ EI W +NE +L + D L WDL + +
Sbjct: 182 IWDVKTTGVRI-VVPAHQAEILSCDWCKYNENLLVTGAVDCSLRGWDLRNVRQPVF---- 236
Query: 236 EDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED 272
ELL GHT I ++P V+ S S D
Sbjct: 237 -----ELL----GHTYAIRRVKFSPFYASVLASCSYD 264
Score = 113 (44.8 bits), Expect = 0.00099, P = 0.00099
Identities = 31/123 (25%), Positives = 56/123 (45%)
Query: 155 LSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSP-HNETILASSG 213
++++ +E++L T S D ++ LWD L ++ H E++ V WS E ++ S
Sbjct: 73 VTWSENNEHVLVTCSGDGSLQLWDTAGAAGPLQVYKEHTQEVYSVDWSQTRGEQLVVSGS 132
Query: 214 TDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
D+ + +WD + +G T F GH + I W+P+ P S S D
Sbjct: 133 WDQTVKLWDPT-VGRSLCT-----------F--KGHESIIYSTIWSPHIPGCFASASGDQ 178
Query: 274 IMQ 276
++
Sbjct: 179 TLR 181
>TAIR|locus:2150788 [details] [associations]
symbol:AT5G08390 "AT5G08390" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0010090
"trichome morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0042546 "cell
wall biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0080008
GO:GO:0008352 PANTHER:PTHR19845 OMA:YWERNDI IPI:IPI00533677
RefSeq:NP_568194.2 UniGene:At.10141 UniGene:At.72630
ProteinModelPortal:F4KB17 SMR:F4KB17 PRIDE:F4KB17
EnsemblPlants:AT5G08390.1 GeneID:830737 KEGG:ath:AT5G08390
Uniprot:F4KB17
Length = 839
Score = 175 (66.7 bits), Expect = 6.8e-10, P = 6.8e-10
Identities = 52/158 (32%), Positives = 71/158 (44%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATG 168
V +H E F S + D L IWD R HT HT VN L F P +I++ G
Sbjct: 107 VNFHPFGE-FFASGSLDTNLKIWDIRKKGCI---HTYKGHTRGVNVLRFTPDGRWIVS-G 161
Query: 169 SADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI-- 226
D V +WDL KL LH F+SH+ +I + + PH E +LA+ D+ + WDL
Sbjct: 162 GEDNVVKVWDLTAGKL-LHEFKSHEGKIQSLDFHPH-EFLLATGSADKTVKFWDLETFEL 219
Query: 227 ----GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNP 260
G E + P+ + G + FSW P
Sbjct: 220 IGSGGTETTGVRCLTFNPDGKSVLCGLQESLKIFSWEP 257
Score = 130 (50.8 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 35/145 (24%), Positives = 67/145 (46%)
Query: 124 DDQKLMIWDTRSHNVSKPSHTVD--AHTAEVNCLSFNPYSEYILATGSADKTVALWDLRN 181
+D K+ +W + KP+ + H++ ++ ++F+ SE ++A G+A T+ LWDL
Sbjct: 37 EDHKVNLWA-----IGKPNAILSLYGHSSGIDSVTFDA-SEGLVAAGAASGTIKLWDLEE 90
Query: 182 LKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPE 241
K+ + + H+ V + P E AS D L +WD+ K G
Sbjct: 91 AKV-VRTLTGHRSNCVSVNFHPFGE-FFASGSLDTNLKIWDIRKKG-------------- 134
Query: 242 LLFIHGGHTAKISDFSWNPNEPWVI 266
+ + GHT ++ + P+ W++
Sbjct: 135 CIHTYKGHTRGVNVLRFTPDGRWIV 159
>TAIR|locus:2014629 [details] [associations]
symbol:DWA2 "AT1G76260" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0009788 "negative regulation of abscisic acid
mediated signaling pathway" evidence=IMP] [GO:0016567 "protein
ubiquitination" evidence=IMP] [GO:0006281 "DNA repair"
evidence=RCA] [GO:0009744 "response to sucrose stimulus"
evidence=RCA] [GO:0009749 "response to glucose stimulus"
evidence=RCA] [GO:0009750 "response to fructose stimulus"
evidence=RCA] [GO:0010100 "negative regulation of
photomorphogenesis" evidence=RCA] [GO:0042732 "D-xylose metabolic
process" evidence=RCA] [GO:0048608 "reproductive structure
development" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009738
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0016567
GO:GO:0009788 EMBL:AC009978 EMBL:AC012394 GO:GO:0080008
EMBL:BT010880 EMBL:AK176410 EMBL:AK175439 EMBL:AK176650
IPI:IPI00524532 RefSeq:NP_177753.1 UniGene:At.24286
UniGene:At.48378 ProteinModelPortal:Q6NPN9 SMR:Q6NPN9 STRING:Q6NPN9
PaxDb:Q6NPN9 PRIDE:Q6NPN9 DNASU:843959 EnsemblPlants:AT1G76260.1
GeneID:843959 KEGG:ath:AT1G76260 GeneFarm:3013 TAIR:At1g76260
eggNOG:NOG314403 HOGENOM:HOG000264967 InParanoid:Q6NPN9 OMA:ACVAWEP
PhylomeDB:Q6NPN9 ProtClustDB:CLSN2682746 Genevestigator:Q6NPN9
Uniprot:Q6NPN9
Length = 350
Score = 168 (64.2 bits), Expect = 8.0e-10, P = 8.0e-10
Identities = 40/167 (23%), Positives = 78/167 (46%)
Query: 110 AWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGS 169
AW+ H+ + + + WD R+ K +++++ A V + +N E+IL +
Sbjct: 175 AWNP-HDVNSVAATSESSIQFWDLRT---MKKNNSIER--AHVRNVDYNLKREHILVSAD 228
Query: 170 ADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEE 229
+ + LWDLR K + H + V+ +P E ++ S GTD +++W S E
Sbjct: 229 DESGIHLWDLRKTKFPVQELPGHTHWTWAVRCNPEYEELILSVGTDSAVNLWFASASSEH 288
Query: 230 QSTEDAEDGPPE----LLFIHGGHTAKISDFSWNPNEPWVICSVSED 272
+++E + + LL + + + +W+ EPW+ S+S D
Sbjct: 289 KTSESPVEASRQRVNPLLNSYTDYEDSVYGLAWSSREPWIFASLSYD 335
>RGD|1311332 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding protein
(TBP)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0004402
"histone acetyltransferase activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA;ISO] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=ISO] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0015629 "actin cytoskeleton"
evidence=IEA;ISO] [GO:0016573 "histone acetylation" evidence=ISO]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA;ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0046983 "protein dimerization
activity" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 RGD:1311332 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212 GO:GO:0006367
GO:GO:0004402 GO:GO:0005669 EMBL:CH473986 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
OrthoDB:EOG469QW7 IPI:IPI00361559 RefSeq:NP_001099835.1
UniGene:Rn.144813 Ensembl:ENSRNOT00000027482 GeneID:294018
KEGG:rno:294018 UCSC:RGD:1311332 NextBio:637428 Uniprot:D3ZH66
Length = 798
Score = 174 (66.3 bits), Expect = 8.2e-10, P = 8.2e-10
Identities = 44/119 (36%), Positives = 62/119 (52%)
Query: 119 FGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWD 178
F S D+ +W T + +P H A+VNC F+P S Y+ ATGSAD+TV LWD
Sbjct: 598 FVSGGHDRVARLWATDHY---QPLRIFAGHLADVNCTRFHPNSNYV-ATGSADRTVRLWD 653
Query: 179 LRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK---IGEEQSTED 234
+ N + F HK I + +SP N LA+ TD R+ +WD+ +GE + D
Sbjct: 654 VLNGNC-VRIFTGHKGPIHSLTFSP-NGRFLATGATDGRVLLWDIGHGLMVGELKGHTD 710
Score = 139 (54.0 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 33/110 (30%), Positives = 56/110 (50%)
Query: 125 DQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKL 184
D+ + +WD + N + H ++ L+F+P + LATG+ D V LWD+ + L
Sbjct: 646 DRTVRLWDVLNGNCVR---IFTGHKGPIHSLTFSPNGRF-LATGATDGRVLLWDIGH-GL 700
Query: 185 KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTED 234
+ + H D + +++S E ILAS D + +WD K E+ T+D
Sbjct: 701 MVGELKGHTDTVCSLRFSRDGE-ILASGSMDNTVRLWDAIKAFEDLETDD 749
>UNIPROTKB|E1BEN8 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377 KO:K03130
CTD:6877 OMA:ERQNNQI EMBL:DAAA02059036 IPI:IPI00698152
RefSeq:NP_001178407.1 UniGene:Bt.59287 ProteinModelPortal:E1BEN8
Ensembl:ENSBTAT00000012808 GeneID:516001 KEGG:bta:516001
NextBio:20872090 Uniprot:E1BEN8
Length = 800
Score = 174 (66.3 bits), Expect = 8.2e-10, P = 8.2e-10
Identities = 44/119 (36%), Positives = 62/119 (52%)
Query: 119 FGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWD 178
F S D+ +W T + +P H A+VNC F+P S Y+ ATGSAD+TV LWD
Sbjct: 600 FVSGGHDRVARLWATDHY---QPLRIFAGHLADVNCTRFHPNSNYV-ATGSADRTVRLWD 655
Query: 179 LRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK---IGEEQSTED 234
+ N + F HK I + +SP N LA+ TD R+ +WD+ +GE + D
Sbjct: 656 VLNGNC-VRIFTGHKGPIHSLTFSP-NGRFLATGATDGRVLLWDIGHGLMVGELKGHTD 712
Score = 139 (54.0 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 33/110 (30%), Positives = 56/110 (50%)
Query: 125 DQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKL 184
D+ + +WD + N + H ++ L+F+P + LATG+ D V LWD+ + L
Sbjct: 648 DRTVRLWDVLNGNCVR---IFTGHKGPIHSLTFSPNGRF-LATGATDGRVLLWDIGH-GL 702
Query: 185 KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTED 234
+ + H D + +++S E ILAS D + +WD K E+ T+D
Sbjct: 703 MVGELKGHTDTVCSLRFSRDGE-ILASGSMDNTVRLWDAVKAFEDVETDD 751
>UNIPROTKB|Q15542 [details] [associations]
symbol:TAF5 "Transcription initiation factor TFIID subunit
5" species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IDA;TAS] [GO:0005669
"transcription factor TFIID complex" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA;IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IDA] [GO:0016568 "chromatin modification"
evidence=IC] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0015629 "actin
cytoskeleton" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0016573 "histone
acetylation" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_116125 GO:GO:0019048 GO:GO:0016032
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003700
GO:GO:0046983 GO:GO:0044212 GO:GO:0006368 EMBL:AL591408
GO:GO:0006367 Reactome:REACT_1788 GO:GO:0005669 GO:GO:0033276
HOVERGEN:HBG050226 KO:K03130 CTD:6877 OMA:ERQNNQI EMBL:X95525
EMBL:U75309 EMBL:U80191 EMBL:AK223615 EMBL:AK291229 EMBL:BC052268
EMBL:BC136340 EMBL:BC136348 IPI:IPI00298925 IPI:IPI00298926
RefSeq:NP_008882.2 UniGene:Hs.96103 PDB:2NXP PDBsum:2NXP
ProteinModelPortal:Q15542 SMR:Q15542 DIP:DIP-28150N IntAct:Q15542
STRING:Q15542 PhosphoSite:Q15542 DMDM:78103206 PaxDb:Q15542
PRIDE:Q15542 Ensembl:ENST00000351396 Ensembl:ENST00000369839
GeneID:6877 KEGG:hsa:6877 UCSC:uc001kwv.3 UCSC:uc010qqq.2
GeneCards:GC10P105117 HGNC:HGNC:11539 HPA:HPA006195 HPA:HPA006474
MIM:601787 neXtProt:NX_Q15542 PharmGKB:PA36314 InParanoid:Q15542
OrthoDB:EOG469QW7 PhylomeDB:Q15542 EvolutionaryTrace:Q15542
GenomeRNAi:6877 NextBio:26855 Bgee:Q15542 CleanEx:HS_TAF5
Genevestigator:Q15542 GermOnline:ENSG00000148835 Uniprot:Q15542
Length = 800
Score = 174 (66.3 bits), Expect = 8.2e-10, P = 8.2e-10
Identities = 44/119 (36%), Positives = 62/119 (52%)
Query: 119 FGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWD 178
F S D+ +W T + +P H A+VNC F+P S Y+ ATGSAD+TV LWD
Sbjct: 600 FVSGGHDRVARLWATDHY---QPLRIFAGHLADVNCTRFHPNSNYV-ATGSADRTVRLWD 655
Query: 179 LRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK---IGEEQSTED 234
+ N + F HK I + +SP N LA+ TD R+ +WD+ +GE + D
Sbjct: 656 VLNGNC-VRIFTGHKGPIHSLTFSP-NGRFLATGATDGRVLLWDIGHGLMVGELKGHTD 712
Score = 139 (54.0 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 33/110 (30%), Positives = 56/110 (50%)
Query: 125 DQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKL 184
D+ + +WD + N + H ++ L+F+P + LATG+ D V LWD+ + L
Sbjct: 648 DRTVRLWDVLNGNCVR---IFTGHKGPIHSLTFSPNGRF-LATGATDGRVLLWDIGH-GL 702
Query: 185 KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTED 234
+ + H D + +++S E ILAS D + +WD K E+ T+D
Sbjct: 703 MVGELKGHTDTVCSLRFSRDGE-ILASGSMDNTVRLWDAIKAFEDLETDD 751
>UNIPROTKB|E2RE41 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0033276 "transcription factor TFTC
complex" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005669 "transcription
factor TFIID complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
EMBL:AAEX03015497 RefSeq:XP_003433663.1 Ensembl:ENSCAFT00000016513
GeneID:100688981 KEGG:cfa:100688981 Uniprot:E2RE41
Length = 801
Score = 174 (66.3 bits), Expect = 8.2e-10, P = 8.2e-10
Identities = 44/119 (36%), Positives = 62/119 (52%)
Query: 119 FGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWD 178
F S D+ +W T + +P H A+VNC F+P S Y+ ATGSAD+TV LWD
Sbjct: 601 FVSGGHDRVARLWATDHY---QPLRIFAGHLADVNCTRFHPNSNYV-ATGSADRTVRLWD 656
Query: 179 LRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK---IGEEQSTED 234
+ N + F HK I + +SP N LA+ TD R+ +WD+ +GE + D
Sbjct: 657 VLNGNC-VRIFTGHKGPIHSLTFSP-NGRFLATGATDGRVLLWDIGHGLMVGELKGHTD 713
Score = 139 (54.0 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 33/110 (30%), Positives = 56/110 (50%)
Query: 125 DQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKL 184
D+ + +WD + N + H ++ L+F+P + LATG+ D V LWD+ + L
Sbjct: 649 DRTVRLWDVLNGNCVR---IFTGHKGPIHSLTFSPNGRF-LATGATDGRVLLWDIGH-GL 703
Query: 185 KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTED 234
+ + H D + +++S E ILAS D + +WD K E+ T+D
Sbjct: 704 MVGELKGHTDTVCSLRFSRDGE-ILASGSMDNTVRLWDAVKAFEDLETDD 752
>UNIPROTKB|B4QFZ8 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7240 "Drosophila simulans"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CM000362 OrthoDB:EOG45DV4X RefSeq:XP_002081558.1
UniGene:Dsi.12266 ProteinModelPortal:B4QFZ8
EnsemblMetazoa:FBtr0225561 GeneID:6734549 KEGG:dsi:Dsim_GD25651
FlyBase:FBgn0196936 Uniprot:B4QFZ8
Length = 335
Score = 167 (63.8 bits), Expect = 9.1e-10, P = 9.1e-10
Identities = 44/179 (24%), Positives = 88/179 (49%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATG 168
VAWH ++F S +D+ + IW + S + D H + + ++P +Y LA+
Sbjct: 20 VAWHP-KGNVFASCGEDKAIRIWSLTGNTWSTKTILSDGHKRTIREIRWSPCGQY-LASA 77
Query: 169 SADKTVALWDLRNLKLKLHS-FESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIG 227
S D T A+W + + + ++ E H++E+ V WS + +LA+ D+ + +W+++ G
Sbjct: 78 SFDATTAIWSKSSGEFECNATLEGHENEVKSVSWS-RSGGLLATCSRDKSVWIWEVA--G 134
Query: 228 EEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDST-DSD 285
+++ E + HT + W+P + V+ S S DN ++ + + D+D
Sbjct: 135 DDEF---------ECAAVLNPHTQDVKRVVWHPTKD-VLASASYDNTIKMFAEEPIDND 183
>FB|FBgn0033972 [details] [associations]
symbol:Ciao1 "Ciao1" species:7227 "Drosophila melanogaster"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE013599 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 OMA:SWKCVCT
OrthoDB:EOG45DV4X CTD:9391 GeneTree:ENSGT00700000104486
EMBL:AY061388 RefSeq:NP_610996.1 UniGene:Dm.630
ProteinModelPortal:Q7K1Y4 SMR:Q7K1Y4 IntAct:Q7K1Y4 STRING:Q7K1Y4
PaxDb:Q7K1Y4 PRIDE:Q7K1Y4 EnsemblMetazoa:FBtr0087460 GeneID:36655
KEGG:dme:Dmel_CG12797 UCSC:CG12797-RA FlyBase:FBgn0033972
InParanoid:Q7K1Y4 PhylomeDB:Q7K1Y4 GenomeRNAi:36655 NextBio:799718
Bgee:Q7K1Y4 Uniprot:Q7K1Y4
Length = 335
Score = 166 (63.5 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 43/179 (24%), Positives = 88/179 (49%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATG 168
VAWH ++F S +D+ + IW + S + D H + + ++P +Y LA+
Sbjct: 20 VAWHP-KGNVFASCGEDKAIRIWSLTGNTWSTKTILSDGHKRTIREIRWSPCGQY-LASA 77
Query: 169 SADKTVALWDLRNLKLKLHS-FESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIG 227
S D T A+W + + + ++ E H++E+ V WS + +LA+ D+ + +W+++ G
Sbjct: 78 SFDATTAIWSKSSGEFECNATLEGHENEVKSVSWS-RSGGLLATCSRDKSVWIWEVA--G 134
Query: 228 EEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDST-DSD 285
+++ E + HT + W+P + ++ S S DN ++ + + D+D
Sbjct: 135 DDEF---------ECAAVLNPHTQDVKRVVWHPTKD-ILASASYDNTIKMFAEEPIDND 183
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 176 (67.0 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 52/158 (32%), Positives = 75/158 (47%)
Query: 111 WHLLHESLF-GSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGS 169
+H + E L GSV D + +WD R HT V CL+F+P ++ LA+ S
Sbjct: 113 FHPMGEYLASGSV--DSNIKLWDVRRKGCV---FRYKGHTQAVRCLAFSPDGKW-LASAS 166
Query: 170 ADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEE 229
D TV LWDL K+ + F SH + VQ+ P NE +LAS DR + +WDL K
Sbjct: 167 DDSTVKLWDLIAGKM-ITEFTSHTSAVNVVQFHP-NEYLLASGSADRTVKLWDLEKFNMI 224
Query: 230 QSTEDAEDGPPELLF------IHGGHTAKISDFSWNPN 261
S+E +LF ++ G + + W P+
Sbjct: 225 GSSEGETGVVRSVLFNPDGSCLYSGSENTLRVYGWEPD 262
Score = 138 (53.6 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 36/112 (32%), Positives = 57/112 (50%)
Query: 118 LFGSVADDQKLMIWDTRSHNVSKPS--HTVDAHTAEVNCLSFNPYSEYILATGSADKTVA 175
L + +D ++ IW VSKP+ ++ HT+ V C+ FN E ++A GS ++
Sbjct: 35 LLATGGEDCRVNIWA-----VSKPNCIMSLTGHTSAVGCIQFNSSEERVVA-GSLSGSLR 88
Query: 176 LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIG 227
LWDL K+ L + HK I + + P E LAS D + +WD+ + G
Sbjct: 89 LWDLEAAKI-LRTLMGHKASISSLDFHPMGE-YLASGSVDSNIKLWDVRRKG 138
Score = 39 (18.8 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 340 EEQRQLLGTEEESSDRHSSDNDT--EDLNSIW 369
E +R+ +E+E D+ SS T ED I+
Sbjct: 360 EGERRSPSSEDEKEDKESSAEITNPEDYKEIF 391
>TAIR|locus:2030387 [details] [associations]
symbol:AT1G20540 "AT1G20540" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0080008 eggNOG:NOG314403 ProtClustDB:CLSN2682746
EMBL:AY093157 EMBL:BT000290 IPI:IPI00532337 RefSeq:NP_173478.2
UniGene:At.25733 UniGene:At.70424 ProteinModelPortal:Q8RWD8
SMR:Q8RWD8 STRING:Q8RWD8 PaxDb:Q8RWD8 PRIDE:Q8RWD8
EnsemblPlants:AT1G20540.1 GeneID:838642 KEGG:ath:AT1G20540
TAIR:At1g20540 InParanoid:Q8RWD8 OMA:GMDCEAR PhylomeDB:Q8RWD8
ArrayExpress:Q8RWD8 Genevestigator:Q8RWD8 Uniprot:Q8RWD8
Length = 351
Score = 166 (63.5 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 42/168 (25%), Positives = 76/168 (45%)
Query: 110 AWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGS 169
AW H+ + + + WD R+ K ++++ H A V + +NP E+IL T
Sbjct: 175 AWDP-HDVNAVAATGESSVQFWDLRT---MKKVNSIE-H-AHVRGVDYNPKREHILVTAE 228
Query: 170 ADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEE 229
+ + +WDLR K+ + H + V+ +P + ++ S+GTD +++W S +
Sbjct: 229 DESGIHVWDLRKAKVPVQELPGHTHWTWAVRCNPEYDGLILSAGTDSVVNLWYASATSSD 288
Query: 230 QST-----EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED 272
T E LL + + + +W+ EPWV S+S D
Sbjct: 289 DKTSESPVESTRQRVNPLLNSYTDYEDSVYGLAWSSREPWVFASLSYD 336
>MGI|MGI:1306796 [details] [associations]
symbol:Apaf1 "apoptotic peptidase activating factor 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA;TAS]
[GO:0006309 "apoptotic DNA fragmentation" evidence=IGI] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006917 "induction of
apoptosis" evidence=ISO] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process"
evidence=ISO;IGI;IMP] [GO:0006952 "defense response" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IMP]
[GO:0007420 "brain development" evidence=IMP] [GO:0008635
"activation of cysteine-type endopeptidase activity involved in
apoptotic process by cytochrome c" evidence=ISO] [GO:0010659
"cardiac muscle cell apoptotic process" evidence=ISO] [GO:0010952
"positive regulation of peptidase activity" evidence=IPI]
[GO:0016505 "apoptotic protease activator activity" evidence=IPI]
[GO:0030900 "forebrain development" evidence=IMP] [GO:0031072 "heat
shock protein binding" evidence=ISO] [GO:0042802 "identical protein
binding" evidence=ISO;IPI] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0043293 "apoptosome" evidence=ISO]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0051402 "neuron apoptotic
process" evidence=IGI] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR000767 InterPro:IPR001315
InterPro:IPR001680 InterPro:IPR002182 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00619 Pfam:PF00931 PRINTS:PR00364
PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294 SMART:SM00320
EMBL:AF064071 MGI:MGI:1306796 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005794 GO:GO:0006952 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030900 GO:GO:0051402
GO:GO:0043531 GO:GO:0006919 GO:GO:0001843 GO:GO:0006309
GO:GO:0008635 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
OrthoDB:EOG43TZTP GO:GO:0043293 GO:GO:0016505 CTD:317
HOVERGEN:HBG018730 KO:K02084 OMA:KVCKNSA InterPro:IPR017251
PIRSF:PIRSF037646 EMBL:BC131683 EMBL:BC131684 IPI:IPI00135366
IPI:IPI00654978 RefSeq:NP_001036023.1 RefSeq:NP_033814.2
UniGene:Mm.220289 PDB:3SFZ PDB:3SHF PDBsum:3SFZ PDBsum:3SHF
ProteinModelPortal:O88879 SMR:O88879 IntAct:O88879 STRING:O88879
PhosphoSite:O88879 PaxDb:O88879 PRIDE:O88879
Ensembl:ENSMUST00000020157 Ensembl:ENSMUST00000159110 GeneID:11783
KEGG:mmu:11783 GeneTree:ENSGT00700000104017 InParanoid:A2RRK8
ChiTaRS:APAF1 NextBio:279591 Bgee:O88879 CleanEx:MM_APAF1
Genevestigator:O88879 GermOnline:ENSMUSG00000019979 Uniprot:O88879
Length = 1249
Score = 174 (66.3 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 45/133 (33%), Positives = 69/133 (51%)
Query: 116 ESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSF-NPYSEYILATGSADKTV 174
+S + + D+K+ IWD+ + K HT D H+ +VNC F N + +LATGS D +
Sbjct: 669 DSYIATCSADKKVKIWDSAT---GKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFL 725
Query: 175 ALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTE- 233
LWDL + + F H + + ++SP +E +LAS D L +WD+ E +S
Sbjct: 726 KLWDLNQKECRNTMF-GHTNSVNHCRFSPDDE-LLASCSADGTLRLWDVRSANERKSINV 783
Query: 234 -----DAEDGPPE 241
+ED PPE
Sbjct: 784 KRFFLSSED-PPE 795
Score = 129 (50.5 bits), Expect = 0.00012, P = 0.00012
Identities = 40/148 (27%), Positives = 78/148 (52%)
Query: 145 VDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWS-P 203
+ AH EV C +F+ YI AT SADK V +WD KL +H+++ H +++ ++
Sbjct: 653 IKAHEDEVLCCAFSSDDSYI-ATCSADKKVKIWDSATGKL-VHTYDEHSEQVNCCHFTNK 710
Query: 204 HNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEP 263
N +LA+ D L +WDL++ E ++T +F GHT ++ ++P++
Sbjct: 711 SNHLLLATGSNDFFLKLWDLNQ-KECRNT----------MF---GHTNSVNHCRFSPDDE 756
Query: 264 WVICSVSEDNIMQEYCDSTDSDTKTMRL 291
++ S S D ++ + + ++ K++ +
Sbjct: 757 -LLASCSADGTLRLWDVRSANERKSINV 783
>RGD|1308483 [details] [associations]
symbol:Pex7 "peroxisomal biogenesis factor 7" species:10116
"Rattus norvegicus" [GO:0001764 "neuron migration"
evidence=IEA;ISO] [GO:0001958 "endochondral ossification"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005053 "peroxisome matrix targeting signal-2 binding"
evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005777 "peroxisome" evidence=ISO] [GO:0005782 "peroxisomal
matrix" evidence=IEA;ISO] [GO:0005829 "cytosol" evidence=IEA;ISO]
[GO:0006625 "protein targeting to peroxisome" evidence=ISO]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA;ISO]
[GO:0007031 "peroxisome organization" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0008611 "ether lipid
biosynthetic process" evidence=IEA;ISO] [GO:0016558 "protein import
into peroxisome matrix" evidence=IEA;ISO] [GO:0019899 "enzyme
binding" evidence=IEA;ISO] [GO:0042803 "protein homodimerization
activity" evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1308483 GO:GO:0005829 GO:GO:0001764
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006635 GO:GO:0005782 GO:GO:0008611 GO:GO:0016558
GO:GO:0001958 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 GeneTree:ENSGT00700000104578
OrthoDB:EOG483D4V EMBL:BC100091 IPI:IPI00367874
RefSeq:NP_001029319.1 UniGene:Rn.162402 STRING:Q498S5
Ensembl:ENSRNOT00000016728 GeneID:308718 KEGG:rno:308718
UCSC:RGD:1308483 InParanoid:Q498S5 NextBio:659419
Genevestigator:Q498S5 Uniprot:Q498S5
Length = 318
Score = 164 (62.8 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 36/107 (33%), Positives = 58/107 (54%)
Query: 119 FGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWD 178
F S + DQ L IWD ++ V + AH AE+ + Y+E +L TG+ D ++ WD
Sbjct: 166 FASASGDQTLRIWDVKTTGVRI---VIPAHQAEILSCDWCKYNENLLVTGAVDCSLRGWD 222
Query: 179 LRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 225
LRN++ + H I +V++SP + ++LAS D + W+ SK
Sbjct: 223 LRNVRQPVFELLGHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSK 269
Score = 164 (62.8 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 37/121 (30%), Positives = 59/121 (48%)
Query: 108 DVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPY-SEYILA 166
DV W +E + + + D L +WDT + P HT EV + ++ E ++
Sbjct: 67 DVTWSENNEHVLVTCSGDGSLQLWDTAK--ATGPLQVYKEHTQEVYSVDWSQTRDEQLVV 124
Query: 167 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
+GS D+TV +WD + L +F H+ I+ WSPH AS+ D+ L +WD+
Sbjct: 125 SGSWDQTVKVWD-PTVGNSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLRIWDVKTT 183
Query: 227 G 227
G
Sbjct: 184 G 184
Score = 133 (51.9 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 41/157 (26%), Positives = 68/157 (43%)
Query: 116 ESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVA 175
E L S + DQ + +WD V T H + + ++P+ A+ S D+T+
Sbjct: 120 EQLVVSGSWDQTVKVWDP---TVGNSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLR 176
Query: 176 LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDA 235
+WD++ +++ +H+ EI W +NE +L + D L WDL + +
Sbjct: 177 IWDVKTTGVRI-VIPAHQAEILSCDWCKYNENLLVTGAVDCSLRGWDLRNVRQPVF---- 231
Query: 236 EDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED 272
ELL GHT I ++P V+ S S D
Sbjct: 232 -----ELL----GHTYAIRRVKFSPFHASVLASCSYD 259
Score = 118 (46.6 bits), Expect = 0.00028, P = 0.00028
Identities = 32/123 (26%), Positives = 57/123 (46%)
Query: 155 LSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSP-HNETILASSG 213
++++ +E++L T S D ++ LWD L ++ H E++ V WS +E ++ S
Sbjct: 68 VTWSENNEHVLVTCSGDGSLQLWDTAKATGPLQVYKEHTQEVYSVDWSQTRDEQLVVSGS 127
Query: 214 TDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
D+ + VWD + +G T F GH + I W+P+ P S S D
Sbjct: 128 WDQTVKVWDPT-VGNSLCT-----------F--RGHESVIYSTIWSPHIPGCFASASGDQ 173
Query: 274 IMQ 276
++
Sbjct: 174 TLR 176
>MGI|MGI:1321392 [details] [associations]
symbol:Pex7 "peroxisomal biogenesis factor 7" species:10090
"Mus musculus" [GO:0001764 "neuron migration" evidence=IMP]
[GO:0001958 "endochondral ossification" evidence=IMP] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005777 "peroxisome"
evidence=ISO] [GO:0005782 "peroxisomal matrix" evidence=ISO]
[GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006625 "protein
targeting to peroxisome" evidence=IMP] [GO:0006635 "fatty acid
beta-oxidation" evidence=IMP] [GO:0006810 "transport" evidence=IEA]
[GO:0007031 "peroxisome organization" evidence=ISO] [GO:0008611
"ether lipid biosynthetic process" evidence=ISO] [GO:0015031
"protein transport" evidence=IEA] [GO:0016558 "protein import into
peroxisome matrix" evidence=ISO;IMP] [GO:0019899 "enzyme binding"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1321392 GO:GO:0005829 GO:GO:0001764
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006635 GO:GO:0005782 GO:GO:0008611 GO:GO:0016558
GO:GO:0001958 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 EMBL:U69171 EMBL:BC132213
EMBL:BC132503 IPI:IPI00130134 RefSeq:NP_032848.1 UniGene:Mm.338363
ProteinModelPortal:P97865 SMR:P97865 STRING:P97865
PhosphoSite:P97865 PaxDb:P97865 PRIDE:P97865
Ensembl:ENSMUST00000020182 GeneID:18634 KEGG:mmu:18634
UCSC:uc007enl.2 GeneTree:ENSGT00700000104578 InParanoid:A2RSR2
OrthoDB:EOG483D4V NextBio:294604 Bgee:P97865 CleanEx:MM_PEX7
Genevestigator:P97865 GermOnline:ENSMUSG00000020003 Uniprot:P97865
Length = 318
Score = 164 (62.8 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 37/121 (30%), Positives = 59/121 (48%)
Query: 108 DVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPY-SEYILA 166
DV W +E + + + D L +WDT + P HT EV + ++ E ++
Sbjct: 67 DVTWSENNEHVLVTCSGDGSLQLWDTAK--ATGPLQVYKEHTQEVYSVDWSQTRGEQLVV 124
Query: 167 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
+GS D+TV +WD + L +F H+ I+ WSPH AS+ D+ L +WD+
Sbjct: 125 SGSWDQTVKVWD-PTVGNSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLRIWDVKTT 183
Query: 227 G 227
G
Sbjct: 184 G 184
Score = 157 (60.3 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 34/107 (31%), Positives = 57/107 (53%)
Query: 119 FGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWD 178
F S + DQ L IWD ++ V + AH E+ + Y+E ++ TG+ D ++ WD
Sbjct: 166 FASASGDQTLRIWDVKTTGVRI---VIPAHQTEILSCDWCKYNENLVVTGAVDCSLRGWD 222
Query: 179 LRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 225
LRN++ + H I +V++SP + ++LAS D + W+ SK
Sbjct: 223 LRNVRQPVFELLGHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSK 269
Score = 131 (51.2 bits), Expect = 9.7e-06, P = 9.7e-06
Identities = 40/157 (25%), Positives = 68/157 (43%)
Query: 116 ESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVA 175
E L S + DQ + +WD V T H + + ++P+ A+ S D+T+
Sbjct: 120 EQLVVSGSWDQTVKVWDP---TVGNSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLR 176
Query: 176 LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDA 235
+WD++ +++ +H+ EI W +NE ++ + D L WDL + +
Sbjct: 177 IWDVKTTGVRI-VIPAHQTEILSCDWCKYNENLVVTGAVDCSLRGWDLRNVRQPVF---- 231
Query: 236 EDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED 272
ELL GHT I ++P V+ S S D
Sbjct: 232 -----ELL----GHTYAIRRVKFSPFHASVLASCSYD 259
Score = 117 (46.2 bits), Expect = 0.00036, P = 0.00036
Identities = 32/123 (26%), Positives = 56/123 (45%)
Query: 155 LSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSP-HNETILASSG 213
++++ +E++L T S D ++ LWD L ++ H E++ V WS E ++ S
Sbjct: 68 VTWSENNEHVLVTCSGDGSLQLWDTAKATGPLQVYKEHTQEVYSVDWSQTRGEQLVVSGS 127
Query: 214 TDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
D+ + VWD + +G T F GH + I W+P+ P S S D
Sbjct: 128 WDQTVKVWDPT-VGNSLCT-----------F--RGHESVIYSTIWSPHIPGCFASASGDQ 173
Query: 274 IMQ 276
++
Sbjct: 174 TLR 176
>MGI|MGI:2442144 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding
protein (TBP)-associated factor" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005669
"transcription factor TFIID complex" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=ISO] [GO:0016573 "histone acetylation"
evidence=ISO] [GO:0033276 "transcription factor TFTC complex"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0046983 "protein dimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:2442144
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003677 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0005669 HOVERGEN:HBG050226
KO:K03130 CTD:6877 OrthoDB:EOG469QW7 EMBL:AK031985 EMBL:AK088953
IPI:IPI00223695 RefSeq:NP_796316.2 UniGene:Mm.301522
ProteinModelPortal:Q8C092 SMR:Q8C092 STRING:Q8C092
PhosphoSite:Q8C092 PaxDb:Q8C092 PRIDE:Q8C092 DNASU:226182
GeneID:226182 KEGG:mmu:226182 UCSC:uc008hun.1 HOGENOM:HOG000212424
InParanoid:Q8C092 NextBio:378056 Genevestigator:Q8C092
GermOnline:ENSMUSG00000025049 Uniprot:Q8C092
Length = 801
Score = 171 (65.3 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 43/119 (36%), Positives = 62/119 (52%)
Query: 119 FGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWD 178
F S D+ +W T + +P H A+VNC ++P S Y+ ATGSAD+TV LWD
Sbjct: 601 FVSGGHDRVARLWATDHY---QPLRIFAGHLADVNCTRYHPNSNYV-ATGSADRTVRLWD 656
Query: 179 LRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK---IGEEQSTED 234
+ N + F HK I + +SP N LA+ TD R+ +WD+ +GE + D
Sbjct: 657 VLNGNC-VRIFTGHKGPIHSLTFSP-NGRFLATGATDGRVLLWDIGHGLMVGELKGHTD 713
Score = 139 (54.0 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 33/110 (30%), Positives = 56/110 (50%)
Query: 125 DQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKL 184
D+ + +WD + N + H ++ L+F+P + LATG+ D V LWD+ + L
Sbjct: 649 DRTVRLWDVLNGNCVR---IFTGHKGPIHSLTFSPNGRF-LATGATDGRVLLWDIGH-GL 703
Query: 185 KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTED 234
+ + H D + +++S E ILAS D + +WD K E+ T+D
Sbjct: 704 MVGELKGHTDTVCSLRFSRDGE-ILASGSMDNTVRLWDAVKAFEDLETDD 752
>UNIPROTKB|O00628 [details] [associations]
symbol:PEX7 "Peroxisomal targeting signal 2 receptor"
species:9606 "Homo sapiens" [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001958 "endochondral ossification" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0008611
"ether lipid biosynthetic process" evidence=IMP] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=IDA]
[GO:0016558 "protein import into peroxisome matrix"
evidence=IDA;IMP] [GO:0007031 "peroxisome organization"
evidence=IMP] [GO:0005777 "peroxisome" evidence=IDA] [GO:0019899
"enzyme binding" evidence=IPI] [GO:0042803 "protein
homodimerization activity" evidence=IDA] [GO:0005782 "peroxisomal
matrix" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0001764 GO:GO:0042803 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782
GO:GO:0008611 Orphanet:177 GO:GO:0016558 GO:GO:0001958 Orphanet:773
TCDB:3.A.20.1.1 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 EMBL:U88871 EMBL:U76560
EMBL:AF180814 EMBL:AF180806 EMBL:AF180807 EMBL:AF180808
EMBL:AF180809 EMBL:AF180810 EMBL:AF180811 EMBL:AF180812
EMBL:AF180813 EMBL:BC006268 IPI:IPI00012577 RefSeq:NP_000279.1
UniGene:Hs.280932 ProteinModelPortal:O00628 SMR:O00628
IntAct:O00628 STRING:O00628 PhosphoSite:O00628 PRIDE:O00628
DNASU:5191 Ensembl:ENST00000318471 GeneID:5191 KEGG:hsa:5191
UCSC:uc003qhd.3 GeneCards:GC06P137185 HGNC:HGNC:8860 HPA:HPA049202
MIM:215100 MIM:601757 MIM:614879 neXtProt:NX_O00628
PharmGKB:PA33202 InParanoid:O00628 PhylomeDB:O00628 GenomeRNAi:5191
NextBio:20076 ArrayExpress:O00628 Bgee:O00628 CleanEx:HS_PEX7
Genevestigator:O00628 GermOnline:ENSG00000112357 Uniprot:O00628
Length = 323
Score = 164 (62.8 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 36/107 (33%), Positives = 58/107 (54%)
Query: 119 FGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWD 178
F S + DQ L IWD ++ V + AH AE+ + Y+E +L TG+ D ++ WD
Sbjct: 171 FASASGDQTLRIWDVKAAGVRI---VIPAHQAEILSCDWCKYNENLLVTGAVDCSLRGWD 227
Query: 179 LRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 225
LRN++ + H I +V++SP + ++LAS D + W+ SK
Sbjct: 228 LRNVRQPVFELLGHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSK 274
Score = 161 (61.7 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 37/121 (30%), Positives = 58/121 (47%)
Query: 108 DVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPY-SEYILA 166
DV W +E + + + D L +WDT + P H EV + ++ E ++
Sbjct: 72 DVTWSENNEHVLITCSGDGSLQLWDTAK--AAGPLQVYKEHAQEVYSVDWSQTRGEQLVV 129
Query: 167 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
+GS D+TV LWD + L +F H+ I+ WSPH AS+ D+ L +WD+
Sbjct: 130 SGSWDQTVKLWD-PTVGKSLCTFRGHESIIYSTIWSPHIPGCFASASGDQTLRIWDVKAA 188
Query: 227 G 227
G
Sbjct: 189 G 189
Score = 134 (52.2 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 42/157 (26%), Positives = 69/157 (43%)
Query: 116 ESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVA 175
E L S + DQ + +WD V K T H + + ++P+ A+ S D+T+
Sbjct: 125 EQLVVSGSWDQTVKLWDP---TVGKSLCTFRGHESIIYSTIWSPHIPGCFASASGDQTLR 181
Query: 176 LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDA 235
+WD++ +++ +H+ EI W +NE +L + D L WDL + +
Sbjct: 182 IWDVKAAGVRI-VIPAHQAEILSCDWCKYNENLLVTGAVDCSLRGWDLRNVRQPVF---- 236
Query: 236 EDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED 272
ELL GHT I ++P V+ S S D
Sbjct: 237 -----ELL----GHTYAIRRVKFSPFHASVLASCSYD 264
Score = 116 (45.9 bits), Expect = 0.00048, P = 0.00048
Identities = 31/112 (27%), Positives = 52/112 (46%)
Query: 111 WHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSA 170
W +E+L + A D L WD R NV +P + HT + + F+P+ +LA+ S
Sbjct: 206 WCKYNENLLVTGAVDCSLRGWDLR--NVRQPVFELLGHTYAIRRVKFSPFHASVLASCSY 263
Query: 171 DKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWD 222
D TV W+ L + E H + + +S + T +A D + ++D
Sbjct: 264 DFTVRFWNFSKPDSLLETVEHHTEFTCGLDFSLQSPTQVADCSWDETIKIYD 315
>RGD|620575 [details] [associations]
symbol:Apaf1 "apoptotic peptidase activating factor 1"
species:10116 "Rattus norvegicus" [GO:0001666 "response to hypoxia"
evidence=IEP] [GO:0001843 "neural tube closure" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0005829 "cytosol" evidence=ISO]
[GO:0006309 "apoptotic DNA fragmentation" evidence=ISO] [GO:0006917
"induction of apoptosis" evidence=IDA] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0006952 "defense response" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISO]
[GO:0007420 "brain development" evidence=ISO;IEP] [GO:0007568
"aging" evidence=IEP] [GO:0007584 "response to nutrient"
evidence=IEP] [GO:0008635 "activation of cysteine-type
endopeptidase activity involved in apoptotic process by cytochrome
c" evidence=ISO] [GO:0010659 "cardiac muscle cell apoptotic
process" evidence=IMP] [GO:0010952 "positive regulation of
peptidase activity" evidence=ISO] [GO:0016505 "apoptotic protease
activator activity" evidence=ISO] [GO:0030154 "cell
differentiation" evidence=IEP] [GO:0030900 "forebrain development"
evidence=ISO] [GO:0031072 "heat shock protein binding"
evidence=IPI] [GO:0034349 "glial cell apoptotic process"
evidence=IEP] [GO:0042802 "identical protein binding"
evidence=ISO;IDA] [GO:0043293 "apoptosome" evidence=ISO;IDA]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=IDA] [GO:0051402 "neuron apoptotic
process" evidence=ISO] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=IDA] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00320 RGD:620575 GO:GO:0005524 GO:GO:0007420 GO:GO:0030154
GO:GO:0006952 GO:GO:0006917 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0071560 GO:GO:0007568
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051260
GO:GO:0001666 GO:GO:0007584 GO:GO:0043531 GO:GO:0042802
Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0043293
CTD:317 HOVERGEN:HBG018730 KO:K02084 InterPro:IPR017251
PIRSF:PIRSF037646 EMBL:AF320222 IPI:IPI00324110 RefSeq:NP_076469.1
UniGene:Rn.64522 ProteinModelPortal:Q9EPV5 SMR:Q9EPV5
MINT:MINT-3370020 STRING:Q9EPV5 PRIDE:Q9EPV5 GeneID:78963
KEGG:rno:78963 UCSC:RGD:620575 InParanoid:Q9EPV5 NextBio:614396
Genevestigator:Q9EPV5 GermOnline:ENSRNOG00000008022 GO:GO:0010659
GO:GO:0034349 Uniprot:Q9EPV5
Length = 1249
Score = 173 (66.0 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 44/133 (33%), Positives = 69/133 (51%)
Query: 116 ESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSF-NPYSEYILATGSADKTV 174
+S + + D+K+ IWD+ K HT + H+ +VNC F N + +LATGS D +
Sbjct: 669 DSYIATCSVDKKVKIWDS---GTGKLVHTYEEHSEQVNCCHFTNKSNHLLLATGSNDSFL 725
Query: 175 ALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTE- 233
LWDL + + F H + + ++SP +E +LAS D L +WD+ E++S
Sbjct: 726 KLWDLNQKECRNTMF-GHTNSVTHCRFSPDDE-LLASCSADGTLKLWDVRSANEKKSINV 783
Query: 234 -----DAEDGPPE 241
+ED PPE
Sbjct: 784 KRFFLSSED-PPE 795
Score = 129 (50.5 bits), Expect = 0.00012, P = 0.00012
Identities = 40/148 (27%), Positives = 77/148 (52%)
Query: 145 VDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWS-P 203
+ AH EV C +F+ YI AT S DK V +WD KL +H++E H +++ ++
Sbjct: 653 IKAHEDEVLCCAFSSDDSYI-ATCSVDKKVKIWDSGTGKL-VHTYEEHSEQVNCCHFTNK 710
Query: 204 HNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEP 263
N +LA+ D L +WDL++ E ++T +F GHT ++ ++P++
Sbjct: 711 SNHLLLATGSNDSFLKLWDLNQ-KECRNT----------MF---GHTNSVTHCRFSPDDE 756
Query: 264 WVICSVSEDNIMQEYCDSTDSDTKTMRL 291
++ S S D ++ + + ++ K++ +
Sbjct: 757 -LLASCSADGTLKLWDVRSANEKKSINV 783
>RGD|1304773 [details] [associations]
symbol:Rfwd2 "ring finger and WD repeat domain 2" species:10116
"Rattus norvegicus" [GO:0000139 "Golgi membrane" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1304773 GO:GO:0000139 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 KO:K10143 CTD:64326 HOVERGEN:HBG054995 EMBL:BC091284
IPI:IPI00363852 RefSeq:NP_001020297.1 UniGene:Rn.8617
ProteinModelPortal:Q5BJY0 PhosphoSite:Q5BJY0 GeneID:360860
KEGG:rno:360860 NextBio:674404 Genevestigator:Q5BJY0 Uniprot:Q5BJY0
Length = 433
Score = 161 (61.7 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 39/117 (33%), Positives = 63/117 (53%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATG 168
V ++L+ L S +DD K+ +W T N+ +++A A V C+ F+P S Y LA G
Sbjct: 221 VDFNLMDPKLLASGSDDAKVKLWST---NLDNSVASIEAK-ANVCCVKFSPSSRYHLAFG 276
Query: 169 SADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 225
AD V +DLRN K + F+ H+ + ++ E + AS TD +L +W++ K
Sbjct: 277 CADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFVSGEEIVSAS--TDSQLKLWNVGK 331
Score = 47 (21.6 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 14/59 (23%), Positives = 24/59 (40%)
Query: 238 GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRS 296
G P L GH + + N ++ C SE+N + Y T + D+++S
Sbjct: 330 GKPYCLRSFKGHINEKNFVGLASNGDYIACG-SENNSLYLYYKGLSKTLLTFKFDTVKS 387
>UNIPROTKB|E1C4U3 [details] [associations]
symbol:E1C4U3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:ERQNNQI EMBL:AADN02030830
EMBL:AADN02030831 IPI:IPI00579493 ProteinModelPortal:E1C4U3
Ensembl:ENSGALT00000013413 Uniprot:E1C4U3
Length = 780
Score = 170 (64.9 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 66/225 (29%), Positives = 101/225 (44%)
Query: 25 WSALPLS-HSIYRFYRLCVAEPFDDAVEERVINE----EYKIWKKNTPFLYDLVVN---N 76
WS P S+ L + + D V ER+++E E KI ++ +Y + N
Sbjct: 477 WSVTPKKLRSVKAAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGTSFSPDRN 536
Query: 77 YVANISCILNISILFFEI-IFTQNFPFPLSRQDVAWHLLHESL---FGSVADDQKLMIWD 132
Y+ +SC + ++ + + FT + V W F S D+ +W
Sbjct: 537 YL--LSCSEDGTVRLWSLQTFTCLVGYKGHNYPV-WDTQFSPYGYYFVSGGHDRVARLWA 593
Query: 133 TRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESH 192
T + +P H A+V C F+P S YI ATGSAD+TV LWD+ N + F H
Sbjct: 594 TDHY---QPLRIFAGHLADVTCTRFHPNSNYI-ATGSADRTVRLWDVLNGNC-VRIFTGH 648
Query: 193 KDEIFQVQWSPHNETILASSGTDRRLHVWDLSK---IGEEQSTED 234
K I + +SP N LA+ TD R+ +WD+ +GE + D
Sbjct: 649 KGPIHSLAFSP-NGRFLATGATDGRVLLWDIGHGLMVGELKGHTD 692
Score = 144 (55.7 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 34/110 (30%), Positives = 57/110 (51%)
Query: 125 DQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKL 184
D+ + +WD + N + H ++ L+F+P + LATG+ D V LWD+ + L
Sbjct: 628 DRTVRLWDVLNGNCVR---IFTGHKGPIHSLAFSPNGRF-LATGATDGRVLLWDIGH-GL 682
Query: 185 KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTED 234
+ + H D I+ +++S E ILAS D + +WD K E+ T+D
Sbjct: 683 MVGELKGHTDTIYALRFSRDGE-ILASGSMDNTVRLWDAVKAFEDLETDD 731
>TAIR|locus:2090792 [details] [associations]
symbol:LWD2 "AT3G26640" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0043153 "entrainment of
circadian clock by photoperiod" evidence=IEP] [GO:0048573
"photoperiodism, flowering" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0048511 GO:GO:0048573
GO:GO:0043153 eggNOG:NOG314410 HOGENOM:HOG000260968 EMBL:X98130
EMBL:AB026648 ProtClustDB:CLSN2682478 EMBL:X97488 EMBL:BT004214
EMBL:AY086141 EMBL:BT020361 IPI:IPI00540911 RefSeq:NP_189298.1
UniGene:At.19781 ProteinModelPortal:Q38960 SMR:Q38960 STRING:Q38960
PaxDb:Q38960 PRIDE:Q38960 EnsemblPlants:AT3G26640.1 GeneID:822276
KEGG:ath:AT3G26640 GeneFarm:2845 TAIR:At3g26640 InParanoid:Q38960
OMA:HSSSHIC PhylomeDB:Q38960 Genevestigator:Q38960 Uniprot:Q38960
Length = 346
Score = 164 (62.8 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 50/182 (27%), Positives = 87/182 (47%)
Query: 93 EIIFTQNFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEV 152
E++ TQ D+AW + +F SV++D + ++D R S + + +
Sbjct: 168 EVVDTQLIAHDKEVYDIAWGGV--GVFASVSEDGSVRVFDLRDKEHSTIIYESGEPSTPL 225
Query: 153 NCLSFNPYSEYILAT---GSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETIL 209
LS+N +AT GSA K V L D+R L + + H+ + + W+PH+ + +
Sbjct: 226 VRLSWNKQDPRYMATVIMGSA-KIVVL-DIRFPALPVVELQRHQASVNAIAWAPHSSSHI 283
Query: 210 ASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEP-WVICS 268
S+G D + +WD+S +G Q E D P L + G A++ W+ ++P WV +
Sbjct: 284 CSAGDDSQALIWDISSMG--QHVEGGLD--PILAYTAG---AEVEQLQWSSSQPDWVAIA 336
Query: 269 VS 270
S
Sbjct: 337 FS 338
>UNIPROTKB|Q8R537 [details] [associations]
symbol:PEX7 "Peroxisomal targeting signal 2 receptor"
species:10029 "Cricetulus griseus" [GO:0005053 "peroxisome matrix
targeting signal-2 binding" evidence=ISS] [GO:0008611 "ether lipid
biosynthetic process" evidence=ISS] [GO:0016558 "protein import
into peroxisome matrix" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008611 GO:GO:0016558
EMBL:AB042621 RefSeq:NP_001231782.1 ProteinModelPortal:Q8R537
GeneID:100736556 CTD:5191 HOVERGEN:HBG003354 GO:GO:0005053
Uniprot:Q8R537
Length = 318
Score = 163 (62.4 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 37/121 (30%), Positives = 59/121 (48%)
Query: 108 DVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPY-SEYILA 166
DV W +E + + + D L +WDT + P HT EV + ++ E ++
Sbjct: 67 DVTWSEDNEHVLVTCSGDGSLQLWDTAK--ATGPLQVYKEHTQEVYSVDWSQTRGEQLVV 124
Query: 167 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
+GS D+TV +WD + L +F H+ I+ WSPH AS+ D+ L +WD+
Sbjct: 125 SGSWDQTVKVWD-PTVGNSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLRIWDVKTA 183
Query: 227 G 227
G
Sbjct: 184 G 184
Score = 157 (60.3 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 34/107 (31%), Positives = 57/107 (53%)
Query: 119 FGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWD 178
F S + DQ L IWD ++ V + AH E+ + Y+E ++ TG+ D ++ WD
Sbjct: 166 FASASGDQTLRIWDVKTAGVRI---VIPAHQTEILSCDWCKYNENLVVTGAVDCSLRGWD 222
Query: 179 LRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 225
LRN++ + H I +V++SP + ++LAS D + W+ SK
Sbjct: 223 LRNVRQPVFELLGHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSK 269
Score = 131 (51.2 bits), Expect = 9.7e-06, P = 9.7e-06
Identities = 40/157 (25%), Positives = 68/157 (43%)
Query: 116 ESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVA 175
E L S + DQ + +WD V T H + + ++P+ A+ S D+T+
Sbjct: 120 EQLVVSGSWDQTVKVWDP---TVGNSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLR 176
Query: 176 LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDA 235
+WD++ +++ +H+ EI W +NE ++ + D L WDL + +
Sbjct: 177 IWDVKTAGVRI-VIPAHQTEILSCDWCKYNENLVVTGAVDCSLRGWDLRNVRQPVF---- 231
Query: 236 EDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED 272
ELL GHT I ++P V+ S S D
Sbjct: 232 -----ELL----GHTYAIRRVKFSPFHASVLASCSYD 259
Score = 116 (45.9 bits), Expect = 0.00047, P = 0.00047
Identities = 32/117 (27%), Positives = 52/117 (44%)
Query: 161 SEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSP-HNETILASSGTDRRLH 219
+E++L T S D ++ LWD L ++ H E++ V WS E ++ S D+ +
Sbjct: 74 NEHVLVTCSGDGSLQLWDTAKATGPLQVYKEHTQEVYSVDWSQTRGEQLVVSGSWDQTVK 133
Query: 220 VWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276
VWD + +G T F GH + I W+P+ P S S D ++
Sbjct: 134 VWDPT-VGNSLCT-----------F--RGHESVIYSTIWSPHIPGCFASASGDQTLR 176
>UNIPROTKB|H3BPD8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
EMBL:AC018552 EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845
HGNC:HGNC:6217 Ensembl:ENST00000566726 Bgee:H3BPD8 Uniprot:H3BPD8
Length = 208
Score = 150 (57.9 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 36/131 (27%), Positives = 65/131 (49%)
Query: 116 ESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVA 175
E L + + + +WD + + + T+ H A + L F+PY E++ A+GS D +
Sbjct: 79 EELIVAGSQSGSIRVWDLEAAKILR---TLMGHKANICSLDFHPYGEFV-ASGSQDTNIK 134
Query: 176 LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDA 235
LWD+R K + + H + +++SP + LAS+ D + +WDL+ G+ S
Sbjct: 135 LWDIRR-KGCVFRYRGHSQAVRCLRFSPDGKW-LASAADDHTVKLWDLTA-GKMMSEFPG 191
Query: 236 EDGPPELLFIH 246
GP ++ H
Sbjct: 192 HTGPVNVVEFH 202
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 164 (62.8 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 43/137 (31%), Positives = 70/137 (51%)
Query: 104 LSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEY 163
L DVAW L S +DD+ L +W+ + K T+ H+ V C +FNP S
Sbjct: 115 LGISDVAWSS-DSRLLVSGSDDKTLKVWEL---STGKSLKTLKGHSNYVFCCNFNPQSNL 170
Query: 164 ILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDL 223
I++ GS D++V +WD+R K L + +H D + V ++ + +++ SS D +WD
Sbjct: 171 IVS-GSFDESVRIWDVRTGKC-LKTLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDT 227
Query: 224 SKIGEEQSTEDAEDGPP 240
+ G+ T +D PP
Sbjct: 228 AS-GQCLKTLIDDDNPP 243
Score = 125 (49.1 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 31/89 (34%), Positives = 48/89 (53%)
Query: 140 KPSHTVD----AHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDE 195
KP++T+ HT V+ + F+P E+ LA+ SADK + +W + K + + HK
Sbjct: 59 KPNYTLKFTLAGHTKAVSAVKFSPNGEW-LASSSADKLIKIWGAYDGKFE-KTISGHKLG 116
Query: 196 IFQVQWSPHNETILASSGTDRRLHVWDLS 224
I V WS + +L S D+ L VW+LS
Sbjct: 117 ISDVAWSSDSR-LLVSGSDDKTLKVWELS 144
>UNIPROTKB|B4HRQ6 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7238 "Drosophila sechellia"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH480816 OrthoDB:EOG45DV4X RefSeq:XP_002033907.1
ProteinModelPortal:B4HRQ6 EnsemblMetazoa:FBtr0203159 GeneID:6609216
KEGG:dse:Dsec_GM20174 FlyBase:FBgn0175057 Uniprot:B4HRQ6
Length = 335
Score = 163 (62.4 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 43/179 (24%), Positives = 87/179 (48%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATG 168
VAWH ++F S +D+ + IW + + D H + + ++P +Y LA+
Sbjct: 20 VAWHP-KGNVFASCGEDKAIRIWSLTGNTWGTKTILSDGHKRTIREIRWSPCGQY-LASA 77
Query: 169 SADKTVALWDLRNLKLKLHS-FESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIG 227
S D T A+W + + + ++ E H++E+ V WS + +LA+ D+ + +W+++ G
Sbjct: 78 SFDATTAIWSKSSGEFECNATLEGHENEVKSVSWS-RSGGLLATCSRDKSVWIWEVA--G 134
Query: 228 EEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDST-DSD 285
+++ E + HT + W+P + V+ S S DN ++ + + D+D
Sbjct: 135 DDEF---------ECAAVLNPHTQDVKRVVWHPTKD-VLASASYDNTIKMFAEEPIDND 183
>UNIPROTKB|F1SHE8 [details] [associations]
symbol:WDR12 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070545 "PeBoW complex" evidence=IEA] [GO:0030687
"preribosome, large subunit precursor" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 KO:K14863 OMA:LQTRFFT
GeneTree:ENSGT00640000091456 EMBL:CU469263 RefSeq:XP_003133640.3
Ensembl:ENSSSCT00000017547 GeneID:100512929 KEGG:ssc:100512929
Uniprot:F1SHE8
Length = 423
Score = 165 (63.1 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 34/104 (32%), Positives = 58/104 (55%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
S + D+ + +WD R+ + S S ++ +HT V + ++P E L +GS D V LWD R
Sbjct: 314 SGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNIVKLWDTR 373
Query: 181 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLS 224
+ K L+ +H+D++ V W+ N +L S G D +L+ + S
Sbjct: 374 SCKAPLYDLAAHEDKVLSVDWT--NTGLLLSGGADNKLYSYRYS 415
>UNIPROTKB|H3BPK1 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000562592 Bgee:H3BPK1 Uniprot:H3BPK1
Length = 210
Score = 150 (57.9 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 36/131 (27%), Positives = 65/131 (49%)
Query: 116 ESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVA 175
E L + + + +WD + + + T+ H A + L F+PY E++ A+GS D +
Sbjct: 75 EELIVAGSQSGSIRVWDLEAAKILR---TLMGHKANICSLDFHPYGEFV-ASGSQDTNIK 130
Query: 176 LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDA 235
LWD+R K + + H + +++SP + LAS+ D + +WDL+ G+ S
Sbjct: 131 LWDIRR-KGCVFRYRGHSQAVRCLRFSPDGKW-LASAADDHTVKLWDLTA-GKMMSEFPG 187
Query: 236 EDGPPELLFIH 246
GP ++ H
Sbjct: 188 HTGPVNVVEFH 198
>TAIR|locus:2059359 [details] [associations]
symbol:COP1 "CONSTITUTIVE PHOTOMORPHOGENIC 1"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA;IMP] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0009640 "photomorphogenesis" evidence=IGI;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0000152 "nuclear ubiquitin
ligase complex" evidence=TAS] [GO:0009647 "skotomorphogenesis"
evidence=TAS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0010119 "regulation of stomatal movement"
evidence=IGI;IMP] [GO:0046283 "anthocyanin-containing compound
metabolic process" evidence=IMP] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0048573 "photoperiodism,
flowering" evidence=IMP] [GO:0006281 "DNA repair" evidence=RCA;IMP]
[GO:0009649 "entrainment of circadian clock" evidence=IMP]
[GO:0010100 "negative regulation of photomorphogenesis"
evidence=RCA] [GO:0048608 "reproductive structure development"
evidence=RCA] [GO:0009641 "shade avoidance" evidence=IMP]
InterPro:IPR001841 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089
PROSITE:PS50294 SMART:SM00184 SMART:SM00320 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0005737 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0010119 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0009649 GO:GO:0008270 GO:GO:0006281 eggNOG:COG2319
GO:GO:0009640 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0009585
GO:GO:0048573 EMBL:AC003033 GO:GO:0004842 InterPro:IPR017907
GO:GO:0009641 GO:GO:0000152 GO:GO:0009647 GO:GO:0046283 EMBL:L24437
EMBL:BT025337 EMBL:AJ000535 EMBL:AJ000536 IPI:IPI00521947
PIR:T01112 RefSeq:NP_180854.1 UniGene:At.298
ProteinModelPortal:P43254 SMR:P43254 DIP:DIP-32850N IntAct:P43254
MINT:MINT-189205 STRING:P43254 PaxDb:P43254 PRIDE:P43254
EnsemblPlants:AT2G32950.1 GeneID:817857 KEGG:ath:AT2G32950
GeneFarm:2849 TAIR:At2g32950 HOGENOM:HOG000006123 InParanoid:P43254
KO:K10143 OMA:PICFEMI PhylomeDB:P43254 ProtClustDB:CLSN2683411
Genevestigator:P43254 GermOnline:AT2G32950 GO:GO:0080008
Uniprot:P43254
Length = 675
Score = 167 (63.8 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 40/107 (37%), Positives = 60/107 (56%)
Query: 117 SLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVAL 176
S+ S +DD K+ +W TR S + +D A + C+ +NP S +A GSAD +
Sbjct: 477 SMLVSGSDDCKVKVWCTRQE-ASVIN--IDMK-ANICCVKYNPGSSNYIAVGSADHHIHY 532
Query: 177 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDL 223
+DLRN+ LH F HK + V++ +NE LAS+ TD L +WD+
Sbjct: 533 YDLRNISQPLHVFSGHKKAVSYVKFLSNNE--LASASTDSTLRLWDV 577
>UNIPROTKB|E1BHK9 [details] [associations]
symbol:E1BHK9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 EMBL:DAAA02074871 IPI:IPI00726849
ProteinModelPortal:E1BHK9 Ensembl:ENSBTAT00000028149 OMA:RTATERK
Uniprot:E1BHK9
Length = 586
Score = 166 (63.5 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 49/152 (32%), Positives = 77/152 (50%)
Query: 79 ANISCILNISILFFEI-IFT-----QNFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWD 132
A +SC + SI ++++ FT Q +P+ D++ H L F S + D +W
Sbjct: 353 ALLSCSEDTSIRYWDLESFTNTVLYQGHAYPVWDLDISPHSL---FFASASYDHTARLW- 408
Query: 133 TRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESH 192
S + + P H A V+C+ F+P S Y LATGS DKTV LW + + F H
Sbjct: 409 --SFDRTYPLRIYAGHLAGVDCVKFHPNSNY-LATGSTDKTVRLWSAQQGN-SVRLFTGH 464
Query: 193 KDEIFQVQWSPHNETILASSGTDRRLHVWDLS 224
+ + +SP+ + L S+G D+ L +WDL+
Sbjct: 465 CGPVRCLAFSPNGQ-YLVSAGEDQLLKLWDLA 495
Score = 151 (58.2 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 38/154 (24%), Positives = 75/154 (48%)
Query: 125 DQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKL 184
D+ + +W + N + H V CL+F+P +Y+++ G D+ + LWDL + L
Sbjct: 444 DKTVRLWSAQQGNSVR---LFTGHCGPVRCLAFSPNGQYLVSAGE-DQLLKLWDLASGTL 499
Query: 185 KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLF 244
H D+I V +S + +++AS+ D + +WD+ + ST A+ ELL
Sbjct: 500 -YKDLHGHTDDITSVTFSL-DSSVIASASMDNSVRIWDIKS--KHNSTP-ADGSSSELLG 554
Query: 245 IHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEY 278
++ G + + + + ++ + E+N QE+
Sbjct: 555 VYTGQMSTVLNVQFMAGSRLLVTGIREEN--QEH 586
>TAIR|locus:2154438 [details] [associations]
symbol:AT5G23430 "AT5G23430" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0005874
GO:GO:0080008 EMBL:AB018110 EMBL:BT002053 IPI:IPI00519668
IPI:IPI00532083 RefSeq:NP_197734.2 RefSeq:NP_851064.1
UniGene:At.45963 ProteinModelPortal:Q8H0T9 SMR:Q8H0T9 IntAct:Q8H0T9
PaxDb:Q8H0T9 PRIDE:Q8H0T9 EnsemblPlants:AT5G23430.1 GeneID:832409
KEGG:ath:AT5G23430 GeneFarm:2999 TAIR:At5g23430
HOGENOM:HOG000008039 InParanoid:Q8H0T9 OMA:DFKCHEG PhylomeDB:Q8H0T9
ProtClustDB:CLSN2717628 Genevestigator:Q8H0T9 GermOnline:AT5G23430
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 Uniprot:Q8H0T9
Length = 837
Score = 168 (64.2 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 53/158 (33%), Positives = 69/158 (43%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATG 168
V +H E F S + D L IWD R HT HT VN L F P ++++ G
Sbjct: 107 VDFHPFGE-FFASGSLDTNLKIWDIRKKGCI---HTYKGHTRGVNVLRFTPDGRWVVS-G 161
Query: 169 SADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGE 228
D V +WDL KL L F+SH+ +I + + PH E +LA+ DR + WDL
Sbjct: 162 GEDNIVKVWDLTAGKL-LTEFKSHEGQIQSLDFHPH-EFLLATGSADRTVKFWDLETFEL 219
Query: 229 EQSTEDAEDGPPELLFIHGGHTA------KISDFSWNP 260
S G L F G T + FSW P
Sbjct: 220 IGSGGPETAGVRCLSFNPDGKTVLCGLQESLKIFSWEP 257
Score = 135 (52.6 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 36/145 (24%), Positives = 67/145 (46%)
Query: 124 DDQKLMIWDTRSHNVSKPSHTVD--AHTAEVNCLSFNPYSEYILATGSADKTVALWDLRN 181
+D K+ +W + KP+ + H++ ++ ++F+ SE ++A G+A T+ LWDL
Sbjct: 37 EDHKVNLWA-----IGKPNAILSLYGHSSGIDSVTFDA-SEVLVAAGAASGTIKLWDLEE 90
Query: 182 LKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPE 241
K+ + + H+ V + P E AS D L +WD+ K G
Sbjct: 91 AKI-VRTLTGHRSNCISVDFHPFGE-FFASGSLDTNLKIWDIRKKG-------------- 134
Query: 242 LLFIHGGHTAKISDFSWNPNEPWVI 266
+ + GHT ++ + P+ WV+
Sbjct: 135 CIHTYKGHTRGVNVLRFTPDGRWVV 159
Score = 119 (46.9 bits), Expect = 0.00093, P = 0.00093
Identities = 35/107 (32%), Positives = 53/107 (49%)
Query: 165 LATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLS 224
+ +G D V +WDL KL L F+SH+ +I + + PH E +LA+ DR + WDL
Sbjct: 158 VVSGGEDNIVKVWDLTAGKL-LTEFKSHEGQIQSLDFHPH-EFLLATGSADRTVKFWDL- 214
Query: 225 KIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSE 271
++ E G PE TA + S+NP+ V+C + E
Sbjct: 215 -----ETFELIGSGGPE--------TAGVRCLSFNPDGKTVLCGLQE 248
>ZFIN|ZDB-GENE-051120-180 [details] [associations]
symbol:taf5 "TAF5 RNA polymerase II, TATA box
binding protein (TBP)-associated factor" species:7955 "Danio rerio"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 ZFIN:ZDB-GENE-051120-180 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 HOVERGEN:HBG050226 OMA:ERQNNQI
OrthoDB:EOG469QW7 HOGENOM:HOG000212424 EMBL:CR812943
IPI:IPI00656497 UniGene:Dr.78627 ProteinModelPortal:B8JIQ0
Ensembl:ENSDART00000015007 ArrayExpress:B8JIQ0 Bgee:B8JIQ0
Uniprot:B8JIQ0
Length = 756
Score = 167 (63.8 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 40/105 (38%), Positives = 56/105 (53%)
Query: 119 FGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWD 178
F S D+ +W T + +P H A+V C F+P S Y+ ATGS+D+TV LWD
Sbjct: 556 FVSGGHDRVARLWATDHY---QPLRIFAGHLADVTCTRFHPNSNYV-ATGSSDRTVRLWD 611
Query: 179 LRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDL 223
+ N + F HK I + +SP N LAS TD R+ +WD+
Sbjct: 612 VLNGNC-VRIFTGHKGPIHSLAFSP-NGKFLASGSTDGRVLLWDI 654
Score = 133 (51.9 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 30/112 (26%), Positives = 59/112 (52%)
Query: 123 ADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNL 182
+ D+ + +WD + N + H ++ L+F+P ++ LA+GS D V LWD+ +
Sbjct: 602 SSDRTVRLWDVLNGNCVR---IFTGHKGPIHSLAFSPNGKF-LASGSTDGRVLLWDIGH- 656
Query: 183 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTED 234
L + + H I+ +++S E I+AS D + +WD+ + ++ T+D
Sbjct: 657 GLMIAELKGHTGTIYALKFSRDGE-IIASGSIDNTVRLWDVMRAIDDVETDD 707
>UNIPROTKB|E2RNA4 [details] [associations]
symbol:WDR12 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070545 "PeBoW complex" evidence=IEA]
[GO:0030687 "preribosome, large subunit precursor" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0005654 "nucleoplasm"
evidence=IEA] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 KO:K14863 OMA:LQTRFFT
CTD:55759 GeneTree:ENSGT00640000091456 EMBL:AAEX03018031
RefSeq:XP_536036.3 Ensembl:ENSCAFT00000019894 GeneID:478876
KEGG:cfa:478876 Uniprot:E2RNA4
Length = 423
Score = 163 (62.4 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 34/104 (32%), Positives = 58/104 (55%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
S + D+ + +WD R+ + S S ++ +HT V L ++P E L +GS D V LWD R
Sbjct: 314 SGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSLKWSPTHEQQLISGSLDNIVKLWDTR 373
Query: 181 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLS 224
+ K L+ +H+D++ V W+ + +L S G D +L+ + S
Sbjct: 374 SCKAPLYDLAAHEDKVLSVDWT--DTGLLLSGGADNKLYSYRYS 415
>UNIPROTKB|Q7RXM4 [details] [associations]
symbol:NCU00202 "Coronin" species:367110 "Neurospora crassa
OR74A" [GO:0005826 "actomyosin contractile ring" evidence=ISS]
[GO:0005885 "Arp2/3 protein complex" evidence=ISS] [GO:0030479
"actin cortical patch" evidence=ISS] [GO:0034316 "negative
regulation of Arp2/3 complex-mediated actin nucleation"
evidence=ISS] [GO:0051015 "actin filament binding" evidence=ISS]
[GO:0051666 "actin cortical patch localization" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051015 GO:GO:0030479 GO:GO:0005826 GO:GO:0051666
GO:GO:0034316 GO:GO:0005885 HOGENOM:HOG000166356 InterPro:IPR015505
InterPro:IPR015048 InterPro:IPR015049 PANTHER:PTHR10856
Pfam:PF08953 Pfam:PF08954 OrthoDB:EOG4TJ02B EMBL:AABX02000001
RefSeq:XP_956587.1 UniGene:Ncr.4234 ProteinModelPortal:Q7RXM4
STRING:Q7RXM4 EnsemblFungi:EFNCRT00000000015 GeneID:3872734
KEGG:ncr:NCU00202 Uniprot:Q7RXM4
Length = 683
Score = 166 (63.5 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 42/143 (29%), Positives = 71/143 (49%)
Query: 108 DVAWHLLHESLFGSVADDQKLMIWDTRSH-----NVSKPSHT-----VDAHTAEVNCLSF 157
D W+ ++ L S +DD K+ +W + + +P+ + HT +V + F
Sbjct: 163 DTDWNPFNDRLIASASDDGKVFVWQVPENFTLYTDAEEPADVSPLSKLSGHTRKVGHVLF 222
Query: 158 NPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRR 217
NP +E ILA+ S D TV WD+ + + H D + + WS N T+L ++ D++
Sbjct: 223 NPAAENILASSSGDLTVKFWDVETGQAPIAI--KHPDIVQSLSWSA-NGTMLVTTSRDKK 279
Query: 218 LHVWDL---SKIGEEQSTEDAED 237
L VWD+ S + E Q E A++
Sbjct: 280 LRVWDVRQQSAVHEYQGHEGAKN 302
>UNIPROTKB|H0Y339 [details] [associations]
symbol:RFWD2 "E3 ubiquitin-protein ligase RFWD2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005813 "centrosome" evidence=IDA] [GO:0005925 "focal adhesion"
evidence=IDA] InterPro:IPR001841 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50294 SMART:SM00184 SMART:SM00320
Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 GO:GO:0005813
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270 GO:GO:0005925
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
EMBL:AL359265 EMBL:AL162736 EMBL:AL513329 EMBL:AL590723
HGNC:HGNC:17440 ChiTaRS:RFWD2 Ensembl:ENST00000367666 Bgee:H0Y339
Uniprot:H0Y339
Length = 566
Score = 161 (61.7 bits), Expect = 5.1e-09, Sum P(2) = 5.1e-09
Identities = 39/117 (33%), Positives = 63/117 (53%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATG 168
V ++L+ L S +DD K+ +W T N+ +++A A V C+ F+P S Y LA G
Sbjct: 354 VDFNLMDPKLLASGSDDAKVKLWST---NLDNSVASIEAK-ANVCCVKFSPSSRYHLAFG 409
Query: 169 SADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 225
AD V +DLRN K + F+ H+ + ++ E + AS TD +L +W++ K
Sbjct: 410 CADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFVSGEEIVSAS--TDSQLKLWNVGK 464
Score = 47 (21.6 bits), Expect = 5.1e-09, Sum P(2) = 5.1e-09
Identities = 14/59 (23%), Positives = 24/59 (40%)
Query: 238 GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRS 296
G P L GH + + N ++ C SE+N + Y T + D+++S
Sbjct: 463 GKPYCLRSFKGHINEKNFVGLASNGDYIACG-SENNSLYLYYKGLSKTLLTFKFDTVKS 520
>UNIPROTKB|Q5BJ90 [details] [associations]
symbol:wdr12 "Ribosome biogenesis protein wdr12"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000463
"maturation of LSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS] [GO:0000466
"maturation of 5.8S rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS] [GO:0005654
"nucleoplasm" evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS]
[GO:0008283 "cell proliferation" evidence=ISS] [GO:0030687
"preribosome, large subunit precursor" evidence=ISS] [GO:0070545
"PeBoW complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030687 GO:GO:0070545
GO:GO:0000463 GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154
KO:K14863 HOGENOM:HOG000264464 HAMAP:MF_03029 CTD:55759
GeneTree:ENSGT00640000091456 HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM
EMBL:BC091577 RefSeq:NP_001025628.1 UniGene:Str.36786 HSSP:Q02793
ProteinModelPortal:Q5BJ90 STRING:Q5BJ90 Ensembl:ENSXETT00000047773
GeneID:595016 KEGG:xtr:595016 Xenbase:XB-GENE-945426 OMA:DNSIGFW
Bgee:Q5BJ90 Uniprot:Q5BJ90
Length = 423
Score = 162 (62.1 bits), Expect = 6.0e-09, P = 6.0e-09
Identities = 37/123 (30%), Positives = 67/123 (54%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATG 168
+++ L + L S + D+ + +WD RS + S ++ +HT V + ++P E L +G
Sbjct: 303 ISYSPLSQRL-ASGSTDRHIRLWDPRSKDGSLVLCSLTSHTGWVTSVKWSPSHEQQLVSG 361
Query: 169 SADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVW----DLS 224
S DK V LWD R+ K L+ +H D++ V W+ + ++ S G+D +L+ + LS
Sbjct: 362 SLDKLVKLWDTRSCKAPLYDLAAHSDKVLSVDWT--DAGLILSGGSDNKLYSYRYTASLS 419
Query: 225 KIG 227
+G
Sbjct: 420 DVG 422
>MGI|MGI:1927241 [details] [associations]
symbol:Wdr12 "WD repeat domain 12" species:10090 "Mus
musculus" [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IPI]
[GO:0008283 "cell proliferation" evidence=ISO] [GO:0030687
"preribosome, large subunit precursor" evidence=ISO] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0070545 "PeBoW complex"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1927241 GO:GO:0005654 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 GO:GO:0000466
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464
OMA:LQTRFFT HAMAP:MF_03029 CTD:55759 GeneTree:ENSGT00640000091456
HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM EMBL:AY059431 EMBL:AY059432
EMBL:AF239765 EMBL:AB041608 EMBL:AK007500 EMBL:AK012022
EMBL:AK016611 EMBL:AK031436 EMBL:BC004748 EMBL:BC052386
IPI:IPI00121562 RefSeq:NP_001185989.1 RefSeq:NP_001185990.1
RefSeq:NP_067287.1 UniGene:Mm.281079 ProteinModelPortal:Q9JJA4
SMR:Q9JJA4 STRING:Q9JJA4 PhosphoSite:Q9JJA4 PaxDb:Q9JJA4
PRIDE:Q9JJA4 Ensembl:ENSMUST00000027173 Ensembl:ENSMUST00000117438
Ensembl:ENSMUST00000122038 GeneID:57750 KEGG:mmu:57750
InParanoid:Q9JJA4 NextBio:313896 Bgee:Q9JJA4 CleanEx:MM_WDR12
Genevestigator:Q9JJA4 GermOnline:ENSMUSG00000026019 Uniprot:Q9JJA4
Length = 423
Score = 162 (62.1 bits), Expect = 6.0e-09, P = 6.0e-09
Identities = 33/104 (31%), Positives = 58/104 (55%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
S + D+ + +WD R+ + S S ++ +HT V + ++P E L +GS D V LWD R
Sbjct: 314 SGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNIVKLWDTR 373
Query: 181 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLS 224
+ K L+ +H+D++ V W+ + +L S G D +L+ + S
Sbjct: 374 SCKAPLYDLAAHEDKVLSVDWT--DTGLLLSGGADNKLYSYSYS 415
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 162 (62.1 bits), Expect = 6.3e-09, P = 6.3e-09
Identities = 32/105 (30%), Positives = 61/105 (58%)
Query: 118 LFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALW 177
L S ++D + +WD S ++ HT++ H+ ++ L+F+P + +LA+GS+D T+ LW
Sbjct: 211 LLASGSNDATIKLWDPPSGSLK---HTLEGHSNKIESLAFSPNGQ-LLASGSSDATIKLW 266
Query: 178 DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWD 222
D + H+ + H D + V +SP ++ + + SG D + +WD
Sbjct: 267 DTATGSFR-HTLKGHSDMVLSVVFSPDSQLLESGSG-DNTIKLWD 309
Score = 142 (55.0 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 36/120 (30%), Positives = 59/120 (49%)
Query: 105 SRQDVAWHLL--HESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSE 162
S D H + H SVA +W+ + HT++ H+ V ++F+P +
Sbjct: 112 SASDSLKHTMEGHSDRVESVAFSPNGQLWNPA---IGSLKHTIEGHSDWVLSVAFSPDGQ 168
Query: 163 YILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWD 222
+LA+GSA+KT+ LWD LK H+ H + + + +SP +LAS D + +WD
Sbjct: 169 -LLASGSAEKTIKLWDSATCGLK-HTLGGHSNWVLPLVFSPDGR-LLASGSNDATIKLWD 225
Score = 138 (53.6 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 28/89 (31%), Positives = 53/89 (59%)
Query: 118 LFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALW 177
L S ++D + +WD S + + T++ H++ V ++F+P + +LA+GS+D T+ LW
Sbjct: 55 LLASGSNDTTIKLWDPASGGLKQ---TLEGHSSSVQSVAFSPNGQ-LLASGSSDTTIKLW 110
Query: 178 DLRNLKLKLHSFESHKDEIFQVQWSPHNE 206
+ + LK H+ E H D + V +SP+ +
Sbjct: 111 NSASDSLK-HTMEGHSDRVESVAFSPNGQ 138
Score = 124 (48.7 bits), Expect = 0.00010, P = 0.00010
Identities = 32/117 (27%), Positives = 57/117 (48%)
Query: 144 TVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSP 203
T++ H+ + ++F+P +LA+GS D T+ LWD + LK + E H + V +SP
Sbjct: 36 TLEGHSDWIETVTFSPDGR-LLASGSNDTTIKLWDPASGGLK-QTLEGHSSSVQSVAFSP 93
Query: 204 HNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNP 260
+ + +LAS +D + +W+ + + + E D + F G WNP
Sbjct: 94 NGQ-LLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNGQL-------WNP 142
>UNIPROTKB|F1NQ64 [details] [associations]
symbol:RFWD2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005925 "focal adhesion"
evidence=IEA] InterPro:IPR001841 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50294 SMART:SM00184 SMART:SM00320
Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 GO:GO:0005813
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270 GO:GO:0005925
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907 OMA:PICFEMI
GeneTree:ENSGT00700000104377 EMBL:AADN02034166 IPI:IPI00602963
Ensembl:ENSGALT00000007170 Uniprot:F1NQ64
Length = 717
Score = 161 (61.7 bits), Expect = 6.4e-09, Sum P(2) = 6.4e-09
Identities = 39/117 (33%), Positives = 63/117 (53%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATG 168
V ++L+ L S +DD K+ +W T N+ +++A A V C+ F+P S Y LA G
Sbjct: 505 VDFNLMDPKLLASGSDDAKVKLWST---NLDNSVASIEAK-ANVCCVKFSPSSRYHLAFG 560
Query: 169 SADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 225
AD V +DLRN K + F+ H+ + ++ E + AS TD +L +W++ K
Sbjct: 561 CADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFVSGEEIVSAS--TDSQLKLWNVGK 615
Score = 49 (22.3 bits), Expect = 6.4e-09, Sum P(2) = 6.4e-09
Identities = 14/59 (23%), Positives = 24/59 (40%)
Query: 238 GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRS 296
G P L GH + + N ++ C SE+N + Y T + D+++S
Sbjct: 614 GKPHCLRSFKGHINEKNFVGLASNGDYIACG-SENNSLYLYYKGLSKTLLTFKFDTVKS 671
>UNIPROTKB|Q0VC24 [details] [associations]
symbol:WDR12 "Ribosome biogenesis protein WDR12"
species:9913 "Bos taurus" [GO:0000463 "maturation of LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0030687 "preribosome, large subunit precursor"
evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS] [GO:0008283
"cell proliferation" evidence=ISS] [GO:0000466 "maturation of 5.8S
rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS]
[GO:0005730 "nucleolus" evidence=ISS] [GO:0007219 "Notch signaling
pathway" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 GO:GO:0030687
GO:GO:0070545 GO:GO:0000463 GO:GO:0000466 InterPro:IPR012972
Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464 OMA:LQTRFFT
HAMAP:MF_03029 EMBL:BT029892 EMBL:BC120386 EMBL:BC142121
IPI:IPI00725024 RefSeq:NP_001069375.1 UniGene:Bt.42368
ProteinModelPortal:Q0VC24 STRING:Q0VC24 Ensembl:ENSBTAT00000020499
GeneID:528209 KEGG:bta:528209 CTD:55759
GeneTree:ENSGT00640000091456 HOVERGEN:HBG054155 InParanoid:Q0VC24
OrthoDB:EOG4V6ZGM NextBio:20874770 Uniprot:Q0VC24
Length = 423
Score = 161 (61.7 bits), Expect = 7.7e-09, P = 7.7e-09
Identities = 33/104 (31%), Positives = 58/104 (55%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
S + D+ + +WD R+ + S S ++ +HT V + ++P E L +GS D V LWD R
Sbjct: 314 SGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNMVKLWDTR 373
Query: 181 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLS 224
+ K L+ +H+D++ V W+ + +L S G D +L+ + S
Sbjct: 374 SCKAPLYDLAAHEDKVLSVDWT--DSGLLLSGGADNKLYSYRYS 415
>UNIPROTKB|Q8IU52 [details] [associations]
symbol:TUWD12 "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 HOVERGEN:HBG057502
UniGene:Hs.604487 HGNC:HGNC:30836 HSSP:Q02793 EMBL:AB053266
EMBL:AB053276 IPI:IPI00796655 SMR:Q8IU52 STRING:Q8IU52
Ensembl:ENST00000393179 Uniprot:Q8IU52
Length = 348
Score = 159 (61.0 bits), Expect = 8.3e-09, P = 8.3e-09
Identities = 52/179 (29%), Positives = 84/179 (46%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
S DQ + +WD R V+K H+ VNC+SF+P Y++ T S+D T+ + DL
Sbjct: 73 SAGSDQTVKVWDVR---VNKLLQHYQVHSGGVNCISFHPSGNYLI-TASSDGTLKILDLL 128
Query: 181 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVW-----DLSKIG-EEQSTED 234
+L +++ + H +F V +S E + AS G D ++ +W +L G +++ +
Sbjct: 129 EGRL-IYTLQGHTGPVFTVSFSKGGE-LFASGGADTQVLLWRTNFDELHCKGLTKRNLKR 186
Query: 235 AE-DGPPELLFIHGG----HTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKT 288
D PP LL I+ H K+ NP + +S +M S DS T T
Sbjct: 187 LHFDSPPHLLDIYPRTPHPHEEKVETVEINPKLEVIDLQISTPPVMDIL--SFDSTTTT 243
Score = 118 (46.6 bits), Expect = 0.00033, P = 0.00033
Identities = 47/172 (27%), Positives = 78/172 (45%)
Query: 118 LFGSVADDQKLMIWDTRSHN-VSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVAL 176
L S ++D+ + IWDT + V+ S +V N + FNP I + GS D+TV +
Sbjct: 28 LIVSCSEDKTIKIWDTTNKQCVNNFSDSVGF----ANFVDFNPSGTCIASAGS-DQTVKV 82
Query: 177 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAE 236
WD+R KL H ++ H + + + P ++ +S +D L + DL + G T
Sbjct: 83 WDVRVNKLLQH-YQVHSGGVNCISFHPSGNYLITAS-SDGTLKILDLLE-GRLIYTLQGH 139
Query: 237 DGPP-ELLFIHGGHT-----AKISDFSWNPNEPWVICS-VSEDNIMQEYCDS 281
GP + F GG A W N + C +++ N+ + + DS
Sbjct: 140 TGPVFTVSFSKGGELFASGGADTQVLLWRTNFDELHCKGLTKRNLKRLHFDS 191
>DICTYBASE|DDB_G0287817 [details] [associations]
symbol:wdr24 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0016558 "protein
import into peroxisome matrix" evidence=IEA] [GO:0005777
"peroxisome" evidence=IEA] [GO:0005053 "peroxisome matrix targeting
signal-2 binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0287817 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GenomeReviews:CM000154_GR
EMBL:AAFI02000104 GO:GO:0016558 GO:GO:0005053 PANTHER:PTHR22850:SF4
RefSeq:XP_637077.1 ProteinModelPortal:Q54JS5
EnsemblProtists:DDB0304352 GeneID:8626332 KEGG:ddi:DDB_G0287817
OMA:NEPCKGL Uniprot:Q54JS5
Length = 1023
Score = 169 (64.5 bits), Expect = 8.8e-09, Sum P(2) = 8.8e-09
Identities = 49/168 (29%), Positives = 73/168 (43%)
Query: 109 VAWH--LLHESLFGSVADDQKLMIWDTR-SHNVSKPSHTVDAHTAEVNCLSFNPYSEYIL 165
+AWH L L GS D L +WD R S N SK T + + + FNP
Sbjct: 122 LAWHPEKLDCILTGS--QDNTLRMWDIRDSANASKI--TFSPKSESIRDVQFNPSQANQF 177
Query: 166 ATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 225
A + T+ LWD+R + + SH+ + + W P + I+AS G DR + VWD S
Sbjct: 178 AAAFDNGTIQLWDIRKPTIAVEKITSHQGLVLTIDWHPEEKNIIASGGRDRAIRVWDFSN 237
Query: 226 IGEEQSTEDAEDGPPELLFIHGG--HTAKIS---DFS---WNPNEPWV 265
G+ + + + G H A S DF W+ +P++
Sbjct: 238 -GKSLNNVSTISSVSRIKWRPGNKWHIASCSSIVDFQIHIWDVKKPYI 284
Score = 141 (54.7 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 32/123 (26%), Positives = 65/123 (52%)
Query: 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYI 164
S +DV ++ + F + D+ + +WD R ++ T +H V + ++P + I
Sbjct: 163 SIRDVQFNPSQANQFAAAFDNGTIQLWDIRKPTIAVEKIT--SHQGLVLTIDWHPEEKNI 220
Query: 165 LATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGT--DRRLHVWD 222
+A+G D+ + +WD N K L++ S + +++W P N+ +AS + D ++H+WD
Sbjct: 221 IASGGRDRAIRVWDFSNGK-SLNNV-STISSVSRIKWRPGNKWHIASCSSIVDFQIHIWD 278
Query: 223 LSK 225
+ K
Sbjct: 279 VKK 281
Score = 132 (51.5 bits), Expect = 9.9e-05, Sum P(2) = 9.9e-05
Identities = 42/176 (23%), Positives = 73/176 (41%)
Query: 108 DVAWH--LL--HESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEY 163
D WH LL + L + A + ++IW+T H+ VN L+++P
Sbjct: 71 DCCWHPSLLENYRFLIATAATNGAVVIWNTVREGSKSVERVFTDHSRAVNKLAWHPEKLD 130
Query: 164 ILATGSADKTVALWDLRN-LKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWD 222
+ TGS D T+ +WD+R+ +F + I VQ++P A++ + + +WD
Sbjct: 131 CILTGSQDNTLRMWDIRDSANASKITFSPKSESIRDVQFNPSQANQFAAAFDNGTIQLWD 190
Query: 223 LSK--IGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276
+ K I E+ T H + W+P E +I S D ++
Sbjct: 191 IRKPTIAVEKITS---------------HQGLVLTIDWHPEEKNIIASGGRDRAIR 231
Score = 43 (20.2 bits), Expect = 8.8e-09, Sum P(2) = 8.8e-09
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 340 EEQRQLLGTEEESSDRHSSDNDTEDLN 366
++ +Q +E D + DND +D N
Sbjct: 717 DQNKQKRNDNKEKIDNNEIDNDNKDNN 743
Score = 42 (19.8 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 7/35 (20%), Positives = 21/35 (60%)
Query: 340 EEQRQLLGTEEESSDRHSSDNDTEDLNSIWSMTDE 374
+ + ++ E ++ ++ ++D+D D+++I DE
Sbjct: 725 DNKEKIDNNEIDNDNKDNNDDDDNDVDNIGEDNDE 759
>RGD|708560 [details] [associations]
symbol:Coro6 "coronin 6" species:10116 "Rattus norvegicus"
[GO:0015629 "actin cytoskeleton" evidence=IBA] [GO:0030036 "actin
cytoskeleton organization" evidence=IBA] [GO:0051015 "actin
filament binding" evidence=IBA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:708560 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0015629 eggNOG:COG2319 GO:GO:0051015
GeneTree:ENSGT00550000074317 HOGENOM:HOG000166356
HOVERGEN:HBG059978 OrthoDB:EOG4RNB8C InterPro:IPR015505
InterPro:IPR015048 InterPro:IPR015049 PANTHER:PTHR10856
Pfam:PF08953 Pfam:PF08954 CTD:84940 OMA:PFYDADS EMBL:AF140359
EMBL:BC098656 IPI:IPI00200600 RefSeq:NP_620815.2 UniGene:Rn.28432
ProteinModelPortal:Q920J3 SMR:Q920J3 PhosphoSite:Q920J3
PRIDE:Q920J3 Ensembl:ENSRNOT00000019759 GeneID:245982
KEGG:rno:245982 InParanoid:Q920J3 NextBio:623280
ArrayExpress:Q920J3 Genevestigator:Q920J3
GermOnline:ENSRNOG00000014496 Uniprot:Q920J3
Length = 472
Score = 161 (61.7 bits), Expect = 9.6e-09, P = 9.6e-09
Identities = 48/195 (24%), Positives = 90/195 (46%)
Query: 108 DVAWHLLHESLFGSVADDQKLMIWD----TRSHNVSKPSHTVDAHTAEVNCLSFNPYSEY 163
D+ W ++++ S +DD +M+W T N+++P T++ H+ V LS++P +
Sbjct: 86 DIDWCPHNDNVIASASDDTTVMVWQIPDYTPVRNITEPVITLEGHSKRVGILSWHPTARN 145
Query: 164 ILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDL 223
+L + D + +W++ ++ L + H D I V W+ N ++LA++ D+ L + D
Sbjct: 146 VLLSAGGDNVIIIWNVGTGEVLLSLDDIHPDVIHSVCWNS-NGSLLATTCKDKTLRIIDP 204
Query: 224 SKIGEEQSTEDAEDG--PPELLFIHGGH--TAKISDFS------WNPN---EPWVICSVS 270
K A +G P +F GH T + S W+PN EP + +
Sbjct: 205 RKSQVVAERFAAHEGMRPMRAVFTRLGHIFTTGFTRMSQRELGLWDPNNFEEPVALQEMD 264
Query: 271 EDN-IMQEYCDSTDS 284
N ++ + D S
Sbjct: 265 TSNGVLLPFYDPDSS 279
>UNIPROTKB|Q9GZL7 [details] [associations]
symbol:WDR12 "Ribosome biogenesis protein WDR12"
species:9606 "Homo sapiens" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005654
"nucleoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IC] [GO:0008283 "cell proliferation" evidence=IMP]
[GO:0070545 "PeBoW complex" evidence=IDA] [GO:0000463 "maturation
of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0030687 "preribosome, large subunit
precursor" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 GO:GO:0030687
GO:GO:0070545 GO:GO:0000463 GO:GO:0000466 InterPro:IPR012972
Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464 OMA:LQTRFFT
HAMAP:MF_03029 CTD:55759 HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM
EMBL:AF242546 EMBL:AK001743 EMBL:AK022781 EMBL:AK022782
EMBL:AK056092 EMBL:BC008082 IPI:IPI00304232 RefSeq:NP_060726.3
UniGene:Hs.73291 ProteinModelPortal:Q9GZL7 SMR:Q9GZL7 IntAct:Q9GZL7
STRING:Q9GZL7 PhosphoSite:Q9GZL7 DMDM:20140802 SWISS-2DPAGE:Q9GZL7
PaxDb:Q9GZL7 PeptideAtlas:Q9GZL7 PRIDE:Q9GZL7 DNASU:55759
Ensembl:ENST00000261015 GeneID:55759 KEGG:hsa:55759 UCSC:uc002uzl.3
GeneCards:GC02M203709 HGNC:HGNC:14098 HPA:HPA036389
neXtProt:NX_Q9GZL7 PharmGKB:PA37841 InParanoid:Q9GZL7
PhylomeDB:Q9GZL7 GenomeRNAi:55759 NextBio:60775 ArrayExpress:Q9GZL7
Bgee:Q9GZL7 CleanEx:HS_WDR12 Genevestigator:Q9GZL7
GermOnline:ENSG00000138442 Uniprot:Q9GZL7
Length = 423
Score = 160 (61.4 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 33/104 (31%), Positives = 58/104 (55%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
S + D+ + +WD R+ + S S ++ +HT V + ++P E L +GS D V LWD R
Sbjct: 314 SGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNIVKLWDTR 373
Query: 181 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLS 224
+ K L+ +H+D++ V W+ + +L S G D +L+ + S
Sbjct: 374 SCKAPLYDLAAHEDKVLSVDWT--DTGLLLSGGADNKLYSYRYS 415
>UNIPROTKB|Q5REE6 [details] [associations]
symbol:WDR12 "Ribosome biogenesis protein WDR12"
species:9601 "Pongo abelii" [GO:0000463 "maturation of LSU-rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS] [GO:0005730
"nucleolus" evidence=ISS] [GO:0008283 "cell proliferation"
evidence=ISS] [GO:0030687 "preribosome, large subunit precursor"
evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 HSSP:P16649
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 KO:K14863
HOGENOM:HOG000264464 OMA:LQTRFFT HAMAP:MF_03029 CTD:55759
GeneTree:ENSGT00640000091456 HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM
EMBL:CR857583 RefSeq:NP_001124867.1 UniGene:Pab.3253
ProteinModelPortal:Q5REE6 Ensembl:ENSPPYT00000015218
GeneID:100171729 KEGG:pon:100171729 InParanoid:Q5REE6
Uniprot:Q5REE6
Length = 423
Score = 160 (61.4 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 33/104 (31%), Positives = 58/104 (55%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
S + D+ + +WD R+ + S S ++ +HT V + ++P E L +GS D V LWD R
Sbjct: 314 SGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNIVKLWDTR 373
Query: 181 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLS 224
+ K L+ +H+D++ V W+ + +L S G D +L+ + S
Sbjct: 374 SCKAPLYDLAAHEDKVLSVDWT--DTGLLLSGGADNKLYSYRYS 415
>UNIPROTKB|Q8NHY2 [details] [associations]
symbol:RFWD2 "E3 ubiquitin-protein ligase RFWD2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0000075 "cell cycle checkpoint"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0006977 "DNA damage response, signal
transduction by p53 class mediator resulting in cell cycle arrest"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=IDA] [GO:0005925 "focal adhesion"
evidence=IDA] InterPro:IPR001841 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50294 SMART:SM00184 SMART:SM00320
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005829 GO:GO:0005813
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0006977
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0016874 GO:GO:0016607
GO:GO:0008270 eggNOG:COG2319 EMBL:CH471067 GO:GO:0005925
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOGENOM:HOG000006123 KO:K10143 OMA:PICFEMI
EMBL:AF508940 EMBL:BK000438 EMBL:AF527539 EMBL:AY509921
EMBL:AK025789 EMBL:AK314750 EMBL:AL359265 EMBL:AL162736
EMBL:AL513329 EMBL:AL590723 EMBL:BC094728 IPI:IPI00171771
IPI:IPI00184865 IPI:IPI00431955 RefSeq:NP_001001740.1
RefSeq:NP_071902.2 UniGene:Hs.523744 ProteinModelPortal:Q8NHY2
SMR:Q8NHY2 IntAct:Q8NHY2 MINT:MINT-260162 STRING:Q8NHY2
PhosphoSite:Q8NHY2 DMDM:55976539 PaxDb:Q8NHY2 PRIDE:Q8NHY2
DNASU:64326 Ensembl:ENST00000308769 Ensembl:ENST00000367669
GeneID:64326 KEGG:hsa:64326 UCSC:uc001gku.1 UCSC:uc001gkv.1
UCSC:uc009wwv.2 CTD:64326 GeneCards:GC01M175913 HGNC:HGNC:17440
HPA:HPA028197 MIM:608067 neXtProt:NX_Q8NHY2 PharmGKB:PA134952161
HOVERGEN:HBG054995 InParanoid:Q8NHY2 OrthoDB:EOG4M0F18
ChiTaRS:RFWD2 GenomeRNAi:64326 NextBio:66247 ArrayExpress:Q8NHY2
Bgee:Q8NHY2 CleanEx:HS_RFWD2 Genevestigator:Q8NHY2
GermOnline:ENSG00000143207 Uniprot:Q8NHY2
Length = 731
Score = 161 (61.7 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 39/117 (33%), Positives = 63/117 (53%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATG 168
V ++L+ L S +DD K+ +W T N+ +++A A V C+ F+P S Y LA G
Sbjct: 519 VDFNLMDPKLLASGSDDAKVKLWST---NLDNSVASIEAK-ANVCCVKFSPSSRYHLAFG 574
Query: 169 SADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 225
AD V +DLRN K + F+ H+ + ++ E + AS TD +L +W++ K
Sbjct: 575 CADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFVSGEEIVSAS--TDSQLKLWNVGK 629
Score = 47 (21.6 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 14/59 (23%), Positives = 24/59 (40%)
Query: 238 GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRS 296
G P L GH + + N ++ C SE+N + Y T + D+++S
Sbjct: 628 GKPYCLRSFKGHINEKNFVGLASNGDYIACG-SENNSLYLYYKGLSKTLLTFKFDTVKS 685
>UNIPROTKB|E2RRJ5 [details] [associations]
symbol:RFWD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089
PROSITE:PS50294 SMART:SM00184 SMART:SM00320 Prosite:PS00518
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 KO:K10143 OMA:PICFEMI
CTD:64326 GeneTree:ENSGT00700000104377 EMBL:AAEX03005193
EMBL:AAEX03005194 RefSeq:XP_537181.2 ProteinModelPortal:E2RRJ5
Ensembl:ENSCAFT00000022674 GeneID:480060 KEGG:cfa:480060
Uniprot:E2RRJ5
Length = 733
Score = 161 (61.7 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 39/117 (33%), Positives = 63/117 (53%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATG 168
V ++L+ L S +DD K+ +W T N+ +++A A V C+ F+P S Y LA G
Sbjct: 521 VDFNLMDPKLLASGSDDAKVKLWST---NLDNSVASIEAK-ANVCCVKFSPSSRYHLAFG 576
Query: 169 SADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 225
AD V +DLRN K + F+ H+ + ++ E + AS TD +L +W++ K
Sbjct: 577 CADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFVSGEEIVSAS--TDSQLKLWNVGK 631
Score = 47 (21.6 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 14/59 (23%), Positives = 24/59 (40%)
Query: 238 GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRS 296
G P L GH + + N ++ C SE+N + Y T + D+++S
Sbjct: 630 GKPYCLRSFKGHINEKNFVGLASNGDYIACG-SENNSLYLYYKGLSKTLLTFKFDTVKS 687
>MGI|MGI:1347046 [details] [associations]
symbol:Rfwd2 "ring finger and WD repeat domain 2"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089 PROSITE:PS50294
SMART:SM00184 SMART:SM00320 UniPathway:UPA00143 MGI:MGI:1347046
Prosite:PS00518 GO:GO:0005737 GO:GO:0005813 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0016874 GO:GO:0016607 GO:GO:0008270 eggNOG:COG2319
GO:GO:0005925 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOGENOM:HOG000006123 KO:K10143 OMA:PICFEMI
CTD:64326 HOVERGEN:HBG054995 OrthoDB:EOG4M0F18 ChiTaRS:RFWD2
EMBL:AF151110 EMBL:BC082804 IPI:IPI00621828 RefSeq:NP_036061.1
UniGene:Mm.328135 ProteinModelPortal:Q9R1A8 SMR:Q9R1A8
STRING:Q9R1A8 PhosphoSite:Q9R1A8 PaxDb:Q9R1A8 PRIDE:Q9R1A8
Ensembl:ENSMUST00000076894 GeneID:26374 KEGG:mmu:26374
UCSC:uc007ddz.1 GeneTree:ENSGT00700000104377 InParanoid:Q9R1A8
NextBio:304277 Bgee:Q9R1A8 CleanEx:MM_RFWD2 Genevestigator:Q9R1A8
GermOnline:ENSMUSG00000048949 Uniprot:Q9R1A8
Length = 733
Score = 161 (61.7 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 39/117 (33%), Positives = 63/117 (53%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATG 168
V ++L+ L S +DD K+ +W T N+ +++A A V C+ F+P S Y LA G
Sbjct: 521 VDFNLMDPKLLASGSDDAKVKLWST---NLDNSVASIEAK-ANVCCVKFSPSSRYHLAFG 576
Query: 169 SADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 225
AD V +DLRN K + F+ H+ + ++ E + AS TD +L +W++ K
Sbjct: 577 CADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFVSGEEIVSAS--TDSQLKLWNVGK 631
Score = 47 (21.6 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 14/59 (23%), Positives = 24/59 (40%)
Query: 238 GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRS 296
G P L GH + + N ++ C SE+N + Y T + D+++S
Sbjct: 630 GKPYCLRSFKGHINEKNFVGLASNGDYIACG-SENNSLYLYYKGLSKTLLTFKFDTVKS 687
>UNIPROTKB|F1MHX1 [details] [associations]
symbol:RFWD2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005925 "focal adhesion" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50294 SMART:SM00184 SMART:SM00320
Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 GO:GO:0005813
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270 GO:GO:0005925
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907 OMA:PICFEMI
GeneTree:ENSGT00700000104377 EMBL:DAAA02043390 EMBL:DAAA02043391
EMBL:DAAA02043392 IPI:IPI00841834 UniGene:Bt.7449
Ensembl:ENSBTAT00000044452 ArrayExpress:F1MHX1 Uniprot:F1MHX1
Length = 735
Score = 161 (61.7 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 39/117 (33%), Positives = 63/117 (53%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATG 168
V ++L+ L S +DD K+ +W T N+ +++A A V C+ F+P S Y LA G
Sbjct: 523 VDFNLMDPKLLASGSDDAKVKLWST---NLDNSVASIEAK-ANVCCVKFSPSSRYHLAFG 578
Query: 169 SADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 225
AD V +DLRN K + F+ H+ + ++ E + AS TD +L +W++ K
Sbjct: 579 CADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFVSGEEIVSAS--TDSQLKLWNVGK 633
Score = 47 (21.6 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 14/59 (23%), Positives = 24/59 (40%)
Query: 238 GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRS 296
G P L GH + + N ++ C SE+N + Y T + D+++S
Sbjct: 632 GKPYCLRSFKGHINEKNFVGLASNGDYIACG-SENNSLYLYYKGLSKTLLTFKFDTVKS 689
>ZFIN|ZDB-GENE-070410-57 [details] [associations]
symbol:wdr85 "WD repeat domain 85" species:7955
"Danio rerio" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-070410-57
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:NOG317327 OMA:DTEYSAD CTD:92715
HOGENOM:HOG000240907 HOVERGEN:HBG080322 OrthoDB:EOG4F7NJV
GeneTree:ENSGT00390000018644 EMBL:BX855605 EMBL:BC133930
IPI:IPI00482001 RefSeq:NP_001076308.1 UniGene:Dr.82410
Ensembl:ENSDART00000089339 GeneID:564032 KEGG:dre:564032
InParanoid:A3KNN6 NextBio:20885191 Uniprot:A3KNN6
Length = 443
Score = 160 (61.4 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 41/112 (36%), Positives = 57/112 (50%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
S DD KL WD R S P+ T HT V + NP+ E+ILATGS D+ V LWD R
Sbjct: 207 SGGDDSKLKGWDLRM-GCSSPTFTSKRHTMGVCSIHSNPHREHILATGSYDENVLLWDGR 265
Query: 181 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQST 232
N+K L S + +++++W P E +L ++ + K E Q T
Sbjct: 266 NMKQPL-SETAVGGGVWRLKWHPSQEHLLLAACMHNDFQILYCQKALEGQET 316
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 159 (61.0 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 41/117 (35%), Positives = 62/117 (52%)
Query: 117 SLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFN-PYSEYILATGSADKTVA 175
S F + + D+ +WDT S + HT++ H V ++FN PY + I ATGS DKT
Sbjct: 105 SCFITGSYDRTCKLWDTAS---GEELHTLEGHRNVVYAIAFNNPYGDKI-ATGSFDKTCK 160
Query: 176 LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQST 232
LW + K H+F H EI + ++P + T++A+ D +WD+ GEE T
Sbjct: 161 LWSVETGKC-YHTFRGHTAEIVCLSFNPQS-TLVATGSMDTTAKLWDIQS-GEEVFT 214
Score = 145 (56.1 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 33/98 (33%), Positives = 52/98 (53%)
Query: 125 DQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKL 184
D+ +W + K HT HTAE+ CLSFNP S ++ATGS D T LWD+++ +
Sbjct: 156 DKTCKLWSVET---GKCYHTFRGHTAEIVCLSFNPQST-LVATGSMDTTAKLWDIQSGE- 210
Query: 185 KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWD 222
++ + H EI + ++ I+ S D + VW+
Sbjct: 211 EVFTLTGHSAEIISLSFNTSGNRIITGS-FDHTVTVWE 247
Score = 129 (50.5 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 37/117 (31%), Positives = 57/117 (48%)
Query: 143 HTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWS 202
HT++ H V ++FN +ATGS DKT LW + K H+F H EI + ++
Sbjct: 128 HTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKC-YHTFRGHTAEIVCLSFN 186
Query: 203 PHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWN 259
P + T++A+ D +WD+ GEE +F GH+A+I S+N
Sbjct: 187 PQS-TLVATGSMDTTAKLWDIQS-GEE-------------VFTLTGHSAEIISLSFN 228
Score = 122 (48.0 bits), Expect = 0.00016, P = 0.00016
Identities = 26/77 (33%), Positives = 41/77 (53%)
Query: 145 VDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPH 204
++ H E++ +SFNP +L TGS+DKT +WD + + L E H DEIF ++
Sbjct: 341 LEGHEGEISKISFNPQGNRLL-TGSSDKTARIWDAQTGQC-LQVLEGHTDEIFSCAFNYK 398
Query: 205 NETILASSGTDRRLHVW 221
+ I+ S D +W
Sbjct: 399 GDIIITGS-KDNTCRIW 414
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 159 (61.0 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 41/117 (35%), Positives = 61/117 (52%)
Query: 117 SLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFN-PYSEYILATGSADKTVA 175
S F + + D+ +WDT S + HT++ H V ++FN PY + I ATGS DKT
Sbjct: 105 SCFITGSYDRTCKVWDTAS---GEELHTLEGHRNVVYAIAFNNPYGDKI-ATGSFDKTCK 160
Query: 176 LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQST 232
LW K H+F H EI + ++P + T++A+ D +WD+ GEE T
Sbjct: 161 LWSAETGKC-YHTFRGHTAEIVCLSFNPQS-TVVATGSMDTTAKLWDIQS-GEEVVT 214
Score = 150 (57.9 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 36/100 (36%), Positives = 53/100 (53%)
Query: 125 DQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKL 184
D+ +W S K HT HTAE+ CLSFNP S ++ATGS D T LWD+++ +
Sbjct: 156 DKTCKLW---SAETGKCYHTFRGHTAEIVCLSFNPQST-VVATGSMDTTAKLWDIQSGE- 210
Query: 185 KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLS 224
++ + H EI + + + I+ S D + VWD S
Sbjct: 211 EVVTLTGHLAEIISLSFDTSGDRIITGS-FDHTVVVWDAS 249
Score = 122 (48.0 bits), Expect = 0.00016, P = 0.00016
Identities = 25/77 (32%), Positives = 42/77 (54%)
Query: 145 VDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPH 204
++ H E++ +SFNP +L TGS+DKT +WD++ + L E H DEIF ++ +
Sbjct: 341 LEGHEGEISKISFNPQGNRLL-TGSSDKTARIWDVQTGQC-LQVLEGHTDEIFSCAFN-Y 397
Query: 205 NETILASSGTDRRLHVW 221
I+ + D +W
Sbjct: 398 KGNIVITGSKDNSCRIW 414
Score = 115 (45.5 bits), Expect = 0.00097, P = 0.00097
Identities = 31/106 (29%), Positives = 54/106 (50%)
Query: 118 LFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALW 177
L GS+ D+ M+WD S K T+ H E+ F+ Y+ ++AT SAD T ++
Sbjct: 277 LTGSM--DKTCMLWDATS---GKCVATLTGHDDEILDSCFD-YTGKLIATASADGTARVY 330
Query: 178 DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDL 223
+ K + E H+ EI ++ ++P +L S +D+ +WD+
Sbjct: 331 NATTRKC-ITKLEGHEGEISKISFNPQGNRLLTGS-SDKTARIWDV 374
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 159 (61.0 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 35/98 (35%), Positives = 54/98 (55%)
Query: 125 DQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKL 184
D+ +W + K HT HTAE+ CLSFNP S ++ATGS D T LWD++N +
Sbjct: 156 DKTCKLWSVET---GKCYHTFRGHTAEIVCLSFNPQST-LVATGSMDTTAKLWDIQNGE- 210
Query: 185 KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWD 222
++++ H EI + ++ + I+ S D + VWD
Sbjct: 211 EVYTLRGHSAEIISLSFNTSGDRIITGS-FDHTVVVWD 247
Score = 152 (58.6 bits), Expect = 7.5e-08, P = 7.5e-08
Identities = 40/117 (34%), Positives = 62/117 (52%)
Query: 117 SLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFN-PYSEYILATGSADKTVA 175
S F + + D+ +WDT S + +T++ H V ++FN PY + I ATGS DKT
Sbjct: 105 SCFITGSYDRTCKLWDTAS---GEELNTLEGHRNVVYAIAFNNPYGDKI-ATGSFDKTCK 160
Query: 176 LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQST 232
LW + K H+F H EI + ++P + T++A+ D +WD+ GEE T
Sbjct: 161 LWSVETGKC-YHTFRGHTAEIVCLSFNPQS-TLVATGSMDTTAKLWDIQN-GEEVYT 214
Score = 124 (48.7 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 25/77 (32%), Positives = 42/77 (54%)
Query: 145 VDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPH 204
++ H E++ +SFNP ++L TGS+DKT +WD + + L E H DEIF ++ +
Sbjct: 341 LEGHEGEISKISFNPQGNHLL-TGSSDKTARIWDAQTGQC-LQVLEGHTDEIFSCAFN-Y 397
Query: 205 NETILASSGTDRRLHVW 221
I+ + D +W
Sbjct: 398 KGNIVITGSKDNTCRIW 414
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 162 (62.1 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 47/157 (29%), Positives = 73/157 (46%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
S + D + +WD R H+ V CL F+P ++ LA+ + D TV LWDL
Sbjct: 122 SGSQDTNIKLWDIRRKGCV---FRYRGHSQAVRCLRFSPDGKW-LASAADDHTVKLWDLT 177
Query: 181 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPP 240
K+ + F H + V++ P NE +LAS +DR + WDL K + S + E GP
Sbjct: 178 AGKM-MSEFPGHTGPVNVVEFHP-NEYLLASGSSDRTIRFWDLEKF-QVVSCIEGEPGPV 234
Query: 241 E-LLF------IHGGHTAKISDFSWNPNEPWVICSVS 270
+LF ++ G + + W P + + VS
Sbjct: 235 RSVLFNPDGCCLYSGCQDSLRVYGWEPERCFDVVLVS 271
Score = 150 (57.9 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 36/131 (27%), Positives = 65/131 (49%)
Query: 116 ESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVA 175
E L + + + +WD + + + T+ H A + L F+PY E++ A+GS D +
Sbjct: 75 EELIVAGSQSGSIRVWDLEAAKILR---TLMGHKANICSLDFHPYGEFV-ASGSQDTNIK 130
Query: 176 LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDA 235
LWD+R K + + H + +++SP + LAS+ D + +WDL+ G+ S
Sbjct: 131 LWDIRR-KGCVFRYRGHSQAVRCLRFSPDGKW-LASAADDHTVKLWDLTA-GKMMSEFPG 187
Query: 236 EDGPPELLFIH 246
GP ++ H
Sbjct: 188 HTGPVNVVEFH 198
>UNIPROTKB|G3V1X0 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 KO:K16482 CTD:282809
UniGene:Hs.604487 GeneID:282809 KEGG:hsa:282809 HGNC:HGNC:30836
ChiTaRS:POC1B GenomeRNAi:282809 NextBio:93521 RefSeq:NP_001186706.1
ProteinModelPortal:G3V1X0 SMR:G3V1X0 Ensembl:ENST00000549035
ArrayExpress:G3V1X0 Bgee:G3V1X0 Uniprot:G3V1X0
Length = 436
Score = 159 (61.0 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 52/179 (29%), Positives = 84/179 (46%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
S DQ + +WD R V+K H+ VNC+SF+P Y++ T S+D T+ + DL
Sbjct: 161 SAGSDQTVKVWDVR---VNKLLQHYQVHSGGVNCISFHPSGNYLI-TASSDGTLKILDLL 216
Query: 181 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVW-----DLSKIG-EEQSTED 234
+L +++ + H +F V +S E + AS G D ++ +W +L G +++ +
Sbjct: 217 EGRL-IYTLQGHTGPVFTVSFSKGGE-LFASGGADTQVLLWRTNFDELHCKGLTKRNLKR 274
Query: 235 AE-DGPPELLFIHGG----HTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKT 288
D PP LL I+ H K+ NP + +S +M S DS T T
Sbjct: 275 LHFDSPPHLLDIYPRTPHPHEEKVETVEINPKLEVIDLQISTPPVMDIL--SFDSTTTT 331
Score = 118 (46.6 bits), Expect = 0.00049, P = 0.00049
Identities = 47/172 (27%), Positives = 78/172 (45%)
Query: 118 LFGSVADDQKLMIWDTRSHN-VSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVAL 176
L S ++D+ + IWDT + V+ S +V N + FNP I + GS D+TV +
Sbjct: 116 LIVSCSEDKTIKIWDTTNKQCVNNFSDSVGF----ANFVDFNPSGTCIASAGS-DQTVKV 170
Query: 177 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAE 236
WD+R KL H ++ H + + + P ++ +S +D L + DL + G T
Sbjct: 171 WDVRVNKLLQH-YQVHSGGVNCISFHPSGNYLITAS-SDGTLKILDLLE-GRLIYTLQGH 227
Query: 237 DGPP-ELLFIHGGHT-----AKISDFSWNPNEPWVICS-VSEDNIMQEYCDS 281
GP + F GG A W N + C +++ N+ + + DS
Sbjct: 228 TGPVFTVSFSKGGELFASGGADTQVLLWRTNFDELHCKGLTKRNLKRLHFDS 279
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 156 (60.0 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 43/138 (31%), Positives = 69/138 (50%)
Query: 108 DVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILAT 167
D+AW L S +DD+ + IWD S + K T+ H V +SFNP S I++
Sbjct: 93 DIAWSQ-DSKLICSASDDKTIKIWDVESGKMVK---TLKGHKEYVFGVSFNPQSNLIVS- 147
Query: 168 GSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIG 227
GS D+ V +WD+ N +H D + V ++ + T++ S D + +WD + G
Sbjct: 148 GSFDENVRIWDV-NTGECTKMISAHSDPVTGVHFN-RDGTLVVSGSYDGTVRIWDTTT-G 204
Query: 228 EEQSTEDAEDGPPELLFI 245
+ +T EDG E+ F+
Sbjct: 205 QLLNTISTEDGK-EVSFV 221
Score = 127 (49.8 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 31/132 (23%), Positives = 66/132 (50%)
Query: 143 HTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWS 202
+T+ H ++ + F+P ++ LA+ SADKT+ +W + K + + E HK+ I + WS
Sbjct: 40 YTLKGHLKSISSVKFSPDGKW-LASASADKTIKIWGAYDGKFE-RTLEGHKEGISDIAWS 97
Query: 203 PHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNE 262
++ ++ S+ D+ + +WD+ E G +++ GH + S+NP
Sbjct: 98 QDSK-LICSASDDKTIKIWDV------------ESG--KMVKTLKGHKEYVFGVSFNPQS 142
Query: 263 PWVICSVSEDNI 274
++ ++N+
Sbjct: 143 NLIVSGSFDENV 154
Score = 125 (49.1 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 29/119 (24%), Positives = 63/119 (52%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
S + D+ + IW K T++ H ++ ++++ S+ ++ + S DKT+ +WD+
Sbjct: 63 SASADKTIKIWGAYD---GKFERTLEGHKEGISDIAWSQDSK-LICSASDDKTIKIWDVE 118
Query: 181 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGP 239
+ K+ + + + HK+ +F V ++P + I++ S D + +WD++ GE A P
Sbjct: 119 SGKM-VKTLKGHKEYVFGVSFNPQSNLIVSGS-FDENVRIWDVNT-GECTKMISAHSDP 174
>UNIPROTKB|Q8TC44 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
UniGene:Hs.25130 HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743
CTD:282809 OrthoDB:EOG41VK2R EMBL:BC026080 EMBL:AK074772
IPI:IPI00152269 RefSeq:NP_758440.1 UniGene:Hs.604487
ProteinModelPortal:Q8TC44 SMR:Q8TC44 IntAct:Q8TC44 STRING:Q8TC44
PhosphoSite:Q8TC44 DMDM:74762610 PRIDE:Q8TC44 DNASU:282809
Ensembl:ENST00000313546 GeneID:282809 KEGG:hsa:282809
UCSC:uc001tba.3 GeneCards:GC12M089814 HGNC:HGNC:30836 HPA:HPA038841
MIM:614784 neXtProt:NX_Q8TC44 PharmGKB:PA165513299
InParanoid:Q8TC44 OMA:TASWDTF PhylomeDB:Q8TC44 ChiTaRS:POC1B
GenomeRNAi:282809 NextBio:93521 ArrayExpress:Q8TC44 Bgee:Q8TC44
CleanEx:HS_WDR51B Genevestigator:Q8TC44 GermOnline:ENSG00000139323
Uniprot:Q8TC44
Length = 478
Score = 159 (61.0 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 52/179 (29%), Positives = 84/179 (46%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
S DQ + +WD R V+K H+ VNC+SF+P Y++ T S+D T+ + DL
Sbjct: 203 SAGSDQTVKVWDVR---VNKLLQHYQVHSGGVNCISFHPSGNYLI-TASSDGTLKILDLL 258
Query: 181 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVW-----DLSKIG-EEQSTED 234
+L +++ + H +F V +S E + AS G D ++ +W +L G +++ +
Sbjct: 259 EGRL-IYTLQGHTGPVFTVSFSKGGE-LFASGGADTQVLLWRTNFDELHCKGLTKRNLKR 316
Query: 235 AE-DGPPELLFIHGG----HTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKT 288
D PP LL I+ H K+ NP + +S +M S DS T T
Sbjct: 317 LHFDSPPHLLDIYPRTPHPHEEKVETVEINPKLEVIDLQISTPPVMDIL--SFDSTTTT 373
Score = 118 (46.6 bits), Expect = 0.00056, P = 0.00056
Identities = 47/172 (27%), Positives = 78/172 (45%)
Query: 118 LFGSVADDQKLMIWDTRSHN-VSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVAL 176
L S ++D+ + IWDT + V+ S +V N + FNP I + GS D+TV +
Sbjct: 158 LIVSCSEDKTIKIWDTTNKQCVNNFSDSVGF----ANFVDFNPSGTCIASAGS-DQTVKV 212
Query: 177 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAE 236
WD+R KL H ++ H + + + P ++ +S +D L + DL + G T
Sbjct: 213 WDVRVNKLLQH-YQVHSGGVNCISFHPSGNYLITAS-SDGTLKILDLLE-GRLIYTLQGH 269
Query: 237 DGPP-ELLFIHGGHT-----AKISDFSWNPNEPWVICS-VSEDNIMQEYCDS 281
GP + F GG A W N + C +++ N+ + + DS
Sbjct: 270 TGPVFTVSFSKGGELFASGGADTQVLLWRTNFDELHCKGLTKRNLKRLHFDS 321
Score = 116 (45.9 bits), Expect = 0.00093, P = 0.00093
Identities = 27/81 (33%), Positives = 43/81 (53%)
Query: 148 HTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNET 207
H A + L +P + LAT S D + LW+ + + + + HKD + VQ+SPH
Sbjct: 17 HKAAITSLDLSPNGKQ-LATASWDTFLMLWNFKP-HARAYRYVGHKDVVTSVQFSPHGN- 73
Query: 208 ILASSGTDRRLHVWDLSKIGE 228
+LAS+ DR + +W K G+
Sbjct: 74 LLASASRDRTVRLWIPDKRGK 94
>TAIR|locus:2202129 [details] [associations]
symbol:AT1G11160 "AT1G11160" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002684 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0080008 GO:GO:0008352 PANTHER:PTHR19845 IPI:IPI00528177
RefSeq:NP_172582.2 UniGene:At.43445 ProteinModelPortal:F4I7E1
SMR:F4I7E1 PRIDE:F4I7E1 EnsemblPlants:AT1G11160.1 GeneID:837657
KEGG:ath:AT1G11160 OMA:DETHATQ Uniprot:F4I7E1
Length = 1021
Score = 163 (62.4 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 52/180 (28%), Positives = 80/180 (44%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATG 168
V +H E L S + D L +WDTR + T HT ++ + F+P ++++ G
Sbjct: 106 VEFHPFGEFL-ASGSSDTNLRVWDTRKKGCIQ---TYKGHTRGISTIEFSPDGRWVVS-G 160
Query: 169 SADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGE 228
D V +WDL KL LH F+ H+ I + + P E +LA+ DR + WDL
Sbjct: 161 GLDNVVKVWDLTAGKL-LHEFKCHEGPIRSLDFHPL-EFLLATGSADRTVKFWDLETFEL 218
Query: 229 EQSTEDAEDGPPELLFIHGGHT--AKISD----FSWNPNEPWVICSVSED---NIMQEYC 279
+T G + F G T + D +SW P VIC D + + ++C
Sbjct: 219 IGTTRPEATGVRAIAFHPDGQTLFCGLDDGLKVYSWEP----VICRDGVDMGWSTLGDFC 274
Score = 148 (57.2 bits), Expect = 8.1e-07, P = 8.1e-07
Identities = 42/143 (29%), Positives = 68/143 (47%)
Query: 124 DDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLK 183
DD K+ +W + P ++ HT+ V+ ++FN +LA G++ + LWDL K
Sbjct: 36 DDYKVNLWSIGK--TTSPM-SLCGHTSPVDSVAFNSEEVLVLA-GASSGVIKLWDLEESK 91
Query: 184 LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELL 243
+ + +F H+ V++ P E LAS +D L VWD K G Q+
Sbjct: 92 M-VRAFTGHRSNCSAVEFHPFGE-FLASGSSDTNLRVWDTRKKGCIQT------------ 137
Query: 244 FIHGGHTAKISDFSWNPNEPWVI 266
+ GHT IS ++P+ WV+
Sbjct: 138 --YKGHTRGISTIEFSPDGRWVV 158
>UNIPROTKB|Q6QEF8 [details] [associations]
symbol:CORO6 "Coronin-6" species:9606 "Homo sapiens"
[GO:0015629 "actin cytoskeleton" evidence=IBA] [GO:0030036 "actin
cytoskeleton organization" evidence=IBA] [GO:0051015 "actin
filament binding" evidence=IBA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0015629 eggNOG:COG2319
GO:GO:0051015 EMBL:AC104564 HOGENOM:HOG000166356 HOVERGEN:HBG059978
InterPro:IPR015505 InterPro:IPR015048 InterPro:IPR015049
PANTHER:PTHR10856 Pfam:PF08953 Pfam:PF08954 HSSP:O89053
EMBL:AF193039 EMBL:AF447884 EMBL:AF447885 EMBL:AY545070
EMBL:AK027777 EMBL:AK096431 EMBL:BC064514 IPI:IPI00034860
IPI:IPI00783124 IPI:IPI00789933 IPI:IPI00791485 IPI:IPI00903139
RefSeq:NP_116243.2 UniGene:Hs.143046 ProteinModelPortal:Q6QEF8
SMR:Q6QEF8 STRING:Q6QEF8 PhosphoSite:Q6QEF8 DMDM:119369490
PaxDb:Q6QEF8 PRIDE:Q6QEF8 DNASU:84940 Ensembl:ENST00000345068
Ensembl:ENST00000388767 Ensembl:ENST00000445145
Ensembl:ENST00000456796 GeneID:84940 KEGG:hsa:84940 UCSC:uc002hel.2
UCSC:uc002hem.3 CTD:84940 GeneCards:GC17M027941 H-InvDB:HIX0013675
HGNC:HGNC:21356 HPA:HPA021556 neXtProt:NX_Q6QEF8
PharmGKB:PA134869901 ChiTaRS:CORO6 GenomeRNAi:84940 NextBio:75402
ArrayExpress:Q6QEF8 Bgee:Q6QEF8 CleanEx:HS_CORO6
Genevestigator:Q6QEF8 GermOnline:ENSG00000167549 Uniprot:Q6QEF8
Length = 472
Score = 158 (60.7 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 46/195 (23%), Positives = 92/195 (47%)
Query: 108 DVAWHLLHESLFGSVADDQKLMIWD----TRSHNVSKPSHTVDAHTAEVNCLSFNPYSEY 163
D+ W ++++ S +DD +M+W T N+++P T++ H+ V LS++P +
Sbjct: 86 DIDWCPHNDNVIASASDDTTIMVWQIPDYTPMRNITEPIITLEGHSKRVGILSWHPTARN 145
Query: 164 ILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDL 223
+L + D + +W++ ++ L + H D I V W+ N ++LA++ D+ L + D
Sbjct: 146 VLLSAGGDNVIIIWNVGTGEVLLSLDDMHPDVIHSVCWNS-NGSLLATTCKDKTLRIIDP 204
Query: 224 SK--IGEEQSTEDAEDGPPELLFIHGGHT-----AKISDFS---WNPN---EPWVICSVS 270
K + EQ+ P +F G +++S+ W+PN EP + +
Sbjct: 205 RKGQVVAEQARPHEGARPLRAVFTADGKLLSTGFSRMSERQLALWDPNNFEEPVALQEMD 264
Query: 271 EDN-IMQEYCDSTDS 284
N ++ + D S
Sbjct: 265 TSNGVLLPFYDPDSS 279
>UNIPROTKB|Q28DW0 [details] [associations]
symbol:ciao1 "Probable cytosolic iron-sulfur protein
assembly protein ciao1" species:8364 "Xenopus (Silurana)
tropicalis" [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] [GO:0097361 "CIA complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226
HOGENOM:HOG000208901 HSSP:P63005 CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:CR848572 EMBL:BC127279 RefSeq:NP_001016887.1
UniGene:Str.66175 ProteinModelPortal:Q28DW0 STRING:Q28DW0
Ensembl:ENSXETT00000009442 GeneID:549641 KEGG:xtr:549641
Xenbase:XB-GENE-1010751 OMA:EEEYECV Bgee:Q28DW0 Uniprot:Q28DW0
Length = 333
Score = 155 (59.6 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 44/176 (25%), Positives = 84/176 (47%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATG 168
+AW+ +L S D+ + IW N S + H V +S++P Y LA+
Sbjct: 22 LAWNP-SGTLLASCGGDRTIRIWGKDGDNWVCKSVLGEGHQRTVRKVSWSPCGNY-LASA 79
Query: 169 SADKTVALWDLRNLKLK-LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIG 227
S D T +W + + + + + E H++E+ V W+P ++LA+ D+ + VW++ +
Sbjct: 80 SFDATTCIWMKKKEEFECITTLEGHENEVKSVAWAPSG-SLLATCSRDKSVWVWEVDE-- 136
Query: 228 EEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTD 283
EE+ E + + HT + W+PN+ ++ S S D+ ++ Y + D
Sbjct: 137 EEEY---------ECVSVLNSHTQDVKHVVWHPNQE-LLASASYDDSVKLYREEED 182
Score = 116 (45.9 bits), Expect = 0.00051, P = 0.00051
Identities = 39/180 (21%), Positives = 82/180 (45%)
Query: 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166
+ VAW SL + + D+ + +W+ + +++HT +V + ++P E +LA
Sbjct: 109 KSVAW-APSGSLLATCSRDKSVWVWEVDEEEEYECVSVLNSHTQDVKHVVWHPNQE-LLA 166
Query: 167 TGSADKTVALW-DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 225
+ S D +V L+ + + + + E H ++ + + E LA+ D+ + +W
Sbjct: 167 SASYDDSVKLYREEEDDWVCCATLEGHTSTVWSLAFDQTGEQ-LATCSDDKTVRIWRQLG 225
Query: 226 IGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSD 285
GE+ S D + + G HT + D +WN + I + D+ ++ + + SD
Sbjct: 226 TGEQGSKSDPNWKC--VCTLTGYHTRTVYDVNWN-HLTGAIATACGDDAVRIFEEDPGSD 282
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 157 (60.3 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 41/117 (35%), Positives = 62/117 (52%)
Query: 117 SLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFN-PYSEYILATGSADKTVA 175
S F + + D+ IWDT S + HT++ H V ++FN PY + + ATGS DKT
Sbjct: 105 SCFITGSYDRTCKIWDTAS---GEELHTLEGHRNVVYAIAFNNPYGDKV-ATGSFDKTCK 160
Query: 176 LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQST 232
LW K ++F H EI + ++P + T++A+ D +WD+ GEE ST
Sbjct: 161 LWSAETGKC-FYTFRGHTAEIVCLAFNPQS-TLVATGSMDTTAKLWDVES-GEEVST 214
Score = 124 (48.7 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 32/98 (32%), Positives = 51/98 (52%)
Query: 125 DQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKL 184
D +WD S + T+ H AE+ L FN + L TGS D T LWD+ + +
Sbjct: 198 DTTAKLWDVES---GEEVSTLAGHFAEIISLCFNTTGDR-LVTGSFDHTAILWDVPSGR- 252
Query: 185 KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWD 222
K+H H+ EI VQ++ + +++A++ D+ VWD
Sbjct: 253 KVHVLSGHRGEISCVQFN-WDCSLIATASLDKSCKVWD 289
>RGD|735072 [details] [associations]
symbol:Wdr12 "WD repeat domain 12" species:10116 "Rattus
norvegicus" [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO;ISS]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO;ISS]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005654 "nucleoplasm"
evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO;ISS]
[GO:0007219 "Notch signaling pathway" evidence=IEA;ISO] [GO:0008283
"cell proliferation" evidence=ISO;ISS] [GO:0030687 "preribosome,
large subunit precursor" evidence=ISO;ISS] [GO:0070545 "PeBoW
complex" evidence=ISO;ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:735072 GO:GO:0005654 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 GO:GO:0000466
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464
OMA:LQTRFFT HAMAP:MF_03029 CTD:55759 GeneTree:ENSGT00640000091456
HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM EMBL:BC063180 IPI:IPI00400751
RefSeq:NP_955442.1 UniGene:Rn.106890 ProteinModelPortal:P61480
STRING:P61480 PRIDE:P61480 Ensembl:ENSRNOT00000023463 GeneID:363237
KEGG:rno:363237 UCSC:RGD:735072 InParanoid:P61480 NextBio:682950
Genevestigator:P61480 GermOnline:ENSRNOG00000017340 Uniprot:P61480
Length = 423
Score = 157 (60.3 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 32/104 (30%), Positives = 58/104 (55%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
S + D+ + +WD R+ + S S ++ +HT V + ++P + L +GS D V LWD R
Sbjct: 314 SGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHDQQLISGSLDNMVKLWDTR 373
Query: 181 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLS 224
+ K L+ +H+D++ V W+ + +L S G D +L+ + S
Sbjct: 374 SCKAPLYDLAAHEDKVLSVDWT--DTGLLLSGGADNKLYSYRYS 415
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 160 (61.4 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 45/147 (30%), Positives = 69/147 (46%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
S + D + +WD R H+ V CL F+P ++ LA+ + D TV LWDL
Sbjct: 122 SGSQDTNIKLWDIRRKGCV---FRYRGHSQAVRCLRFSPDGKW-LASAADDHTVKLWDLT 177
Query: 181 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPP 240
K+ + F H + V++ P NE +LAS +DR + WDL K + S + E GP
Sbjct: 178 AGKM-MSEFPGHTGPVNVVEFHP-NEYLLASGSSDRTIRFWDLEKF-QVVSCIEGEPGPV 234
Query: 241 E-LLF------IHGGHTAKISDFSWNP 260
+LF ++ G + + W P
Sbjct: 235 RSILFNPDGCCLYSGCQDSLRVYGWEP 261
Score = 150 (57.9 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 36/131 (27%), Positives = 65/131 (49%)
Query: 116 ESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVA 175
E L + + + +WD + + + T+ H A + L F+PY E++ A+GS D +
Sbjct: 75 EELIVAGSQSGSIRVWDLEAAKILR---TLMGHKANICSLDFHPYGEFV-ASGSQDTNIK 130
Query: 176 LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDA 235
LWD+R K + + H + +++SP + LAS+ D + +WDL+ G+ S
Sbjct: 131 LWDIRR-KGCVFRYRGHSQAVRCLRFSPDGKW-LASAADDHTVKLWDLTA-GKMMSEFPG 187
Query: 236 EDGPPELLFIH 246
GP ++ H
Sbjct: 188 HTGPVNVVEFH 198
>UNIPROTKB|E1C100 [details] [associations]
symbol:ERCC8 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000109 "nucleotide-excision repair complex"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=IEA] [GO:0006979 "response to
oxidative stress" evidence=IEA] [GO:0009411 "response to UV"
evidence=IEA] [GO:0010165 "response to X-ray" evidence=IEA]
[GO:0016363 "nuclear matrix" evidence=IEA] [GO:0031464 "Cul4A-RING
ubiquitin ligase complex" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=IEA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045739 "positive regulation of DNA repair" evidence=IEA]
[GO:0051865 "protein autoubiquitination" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0009411 GO:GO:0006979 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004842 GO:GO:0016363
GO:GO:0000209 GO:GO:0010165 GO:GO:0045739 GO:GO:0051865
GO:GO:0006283 KO:K10570 GO:GO:0031464 GO:GO:0000109 CTD:1161
GeneTree:ENSGT00390000009065 OMA:TMLRGHY EMBL:AADN02045784
EMBL:AADN02045777 EMBL:AADN02045778 EMBL:AADN02045779
EMBL:AADN02045780 EMBL:AADN02045781 EMBL:AADN02045782
EMBL:AADN02045783 IPI:IPI00574117 RefSeq:XP_424742.1
UniGene:Gga.11058 ProteinModelPortal:E1C100
Ensembl:ENSGALT00000023755 GeneID:427153 KEGG:gga:427153
NextBio:20828454 Uniprot:E1C100
Length = 399
Score = 156 (60.0 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 44/186 (23%), Positives = 86/186 (46%)
Query: 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAH-TAEVNCLSFNPYSEY 163
S + V W+ +F S + D+ L IWDT N +P+ T + +S
Sbjct: 101 SVETVQWYPHDTGMFTSSSFDKTLKIWDT---NTLQPADVFQFEGTVYSHHMSPVATKHC 157
Query: 164 ILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDL 223
++A G+ V L DL++ H + H+ E+ V WSP +E +LA++ D ++ +WD+
Sbjct: 158 LIAVGTKSPKVQLCDLKSGSCS-HILQGHRQEVLAVSWSPRHEYVLATASADSKVKLWDV 216
Query: 224 SKIGEEQSTEDAEDGPPELLF---IHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCD 280
+ +T D +G ++ H +++ + ++ + +V D+ M+ +
Sbjct: 217 RRASGCLTTLDQHNGEKSKASSEAVNTAHNGRVNGLCYT-SDGLHLLTVGTDDRMRLWNS 275
Query: 281 STDSDT 286
ST +T
Sbjct: 276 STGENT 281
>UNIPROTKB|F1P2Y8 [details] [associations]
symbol:WDR12 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0005654 "nucleoplasm" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0030687 "preribosome, large subunit precursor"
evidence=IEA] [GO:0070545 "PeBoW complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 OMA:LQTRFFT
GeneTree:ENSGT00640000091456 EMBL:AADN02019869 IPI:IPI00587836
Ensembl:ENSGALT00000013803 Uniprot:F1P2Y8
Length = 411
Score = 156 (60.0 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 32/101 (31%), Positives = 56/101 (55%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
S + D+ + +WD RS + S ++ +HT V + ++P E+ L +GS D V LWD R
Sbjct: 302 SGSTDRHIRLWDPRSKDGSLVLLSLTSHTGWVTSVKWSPTHEHQLISGSLDNIVKLWDTR 361
Query: 181 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVW 221
+ K L+ +H+D++ V W+ +L S G D +L+ +
Sbjct: 362 SCKAPLYDLAAHEDKVLCVDWTEAG--LLLSGGADNKLYCY 400
Score = 121 (47.7 bits), Expect = 0.00021, P = 0.00021
Identities = 32/104 (30%), Positives = 51/104 (49%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
S + D + +WD + + T+ + N +S++P LA+GS D+ + LWD R
Sbjct: 261 SASWDHTIKLWDAETGGLKS---TLTGNKV-FNSVSYSPLCRR-LASGSTDRHIRLWDPR 315
Query: 181 NL--KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWD 222
+ L L S SH + V+WSP +E L S D + +WD
Sbjct: 316 SKDGSLVLLSLTSHTGWVTSVKWSPTHEHQLISGSLDNIVKLWD 359
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 159 (61.0 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 45/147 (30%), Positives = 69/147 (46%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
S + D + +WD R H+ V CL F+P ++ LA+ + D TV LWDL
Sbjct: 122 SGSQDTNIKLWDIRRKGCV---FRYRGHSQAVRCLRFSPDGKW-LASAADDHTVKLWDLT 177
Query: 181 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPP 240
K+ + F H + V++ P NE +LAS +DR + WDL K + S + E GP
Sbjct: 178 AGKM-MSEFPGHTGPVNVVEFHP-NEYLLASGSSDRTIRFWDLEKF-QVVSCIEGEPGPV 234
Query: 241 E-LLF------IHGGHTAKISDFSWNP 260
+LF ++ G + + W P
Sbjct: 235 RSVLFNPDGCCLYSGCQDSLRVYGWEP 261
Score = 150 (57.9 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 36/131 (27%), Positives = 65/131 (49%)
Query: 116 ESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVA 175
E L + + + +WD + + + T+ H A + L F+PY E++ A+GS D +
Sbjct: 75 EELIVAGSQSGSIRVWDLEAAKILR---TLMGHKANICSLDFHPYGEFV-ASGSQDTNIK 130
Query: 176 LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDA 235
LWD+R K + + H + +++SP + LAS+ D + +WDL+ G+ S
Sbjct: 131 LWDIRR-KGCVFRYRGHSQAVRCLRFSPDGKW-LASAADDHTVKLWDLTA-GKMMSEFPG 187
Query: 236 EDGPPELLFIH 246
GP ++ H
Sbjct: 188 HTGPVNVVEFH 198
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 159 (61.0 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 45/147 (30%), Positives = 69/147 (46%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
S + D + +WD R H+ V CL F+P ++ LA+ + D TV LWDL
Sbjct: 122 SGSQDTNIKLWDIRRKGCV---FRYRGHSQAVRCLRFSPDGKW-LASAADDHTVKLWDLT 177
Query: 181 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPP 240
K+ + F H + V++ P NE +LAS +DR + WDL K + S + E GP
Sbjct: 178 AGKM-MSEFPGHTGPVNVVEFHP-NEYLLASGSSDRTIRFWDLEKF-QVVSCIEGEPGPV 234
Query: 241 E-LLF------IHGGHTAKISDFSWNP 260
+LF ++ G + + W P
Sbjct: 235 RSVLFNPDGCCLYSGCQDSLRVYGWEP 261
Score = 150 (57.9 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 36/131 (27%), Positives = 65/131 (49%)
Query: 116 ESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVA 175
E L + + + +WD + + + T+ H A + L F+PY E++ A+GS D +
Sbjct: 75 EELIVAGSQSGSIRVWDLEAAKILR---TLMGHKANICSLDFHPYGEFV-ASGSQDTNIK 130
Query: 176 LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDA 235
LWD+R K + + H + +++SP + LAS+ D + +WDL+ G+ S
Sbjct: 131 LWDIRR-KGCVFRYRGHSQAVRCLRFSPDGKW-LASAADDHTVKLWDLTA-GKMMSEFPG 187
Query: 236 EDGPPELLFIH 246
GP ++ H
Sbjct: 188 HTGPVNVVEFH 198
>UNIPROTKB|Q5ZIU8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 HOGENOM:HOG000008039
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 EMBL:DQ410670
EMBL:AJ720686 IPI:IPI00822740 RefSeq:NP_001025730.1
UniGene:Gga.7972 ProteinModelPortal:Q5ZIU8 GeneID:415631
KEGG:gga:415631 CTD:10300 HOVERGEN:HBG052294 NextBio:20819203
Uniprot:Q5ZIU8
Length = 657
Score = 159 (61.0 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 48/148 (32%), Positives = 70/148 (47%)
Query: 120 GSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDL 179
GS+ D KL WD R +HT V CL F+P ++ LA+ + D TV LWDL
Sbjct: 123 GSLDTDIKL--WDVRRKGCI---FKYKSHTQAVRCLRFSPDGKW-LASAADDHTVKLWDL 176
Query: 180 RNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGP 239
K+ + F H + V++ P +E +LAS +DR + WDL K E+ E P
Sbjct: 177 TAGKV-MFEFTGHSGPVNVVEFHP-SEYLLASGSSDRTIRFWDLEKFHVVSCIEE-EATP 233
Query: 240 PE-LLF------IHGGHTAKISDFSWNP 260
+LF ++GG + + W P
Sbjct: 234 VRCILFNPDGCCLYGGFQDSLRVYGWEP 261
Score = 143 (55.4 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 35/131 (26%), Positives = 65/131 (49%)
Query: 116 ESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVA 175
E L + + + +WD + + + T+ H A + L F+PY ++ A+GS D +
Sbjct: 75 EELIVAGSQSGSIRVWDLEAAKILR---TLLGHKANICSLDFHPYGSFV-ASGSLDTDIK 130
Query: 176 LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDA 235
LWD+R K + ++SH + +++SP + LAS+ D + +WDL+ G+
Sbjct: 131 LWDVRR-KGCIFKYKSHTQAVRCLRFSPDGKW-LASAADDHTVKLWDLTA-GKVMFEFTG 187
Query: 236 EDGPPELLFIH 246
GP ++ H
Sbjct: 188 HSGPVNVVEFH 198
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 159 (61.0 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 45/147 (30%), Positives = 69/147 (46%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
S + D + +WD R H+ V CL F+P ++ LA+ + D TV LWDL
Sbjct: 122 SGSQDTNIKLWDIRRKGCV---FRYRGHSQAVRCLRFSPDGKW-LASAADDHTVKLWDLT 177
Query: 181 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPP 240
K+ + F H + V++ P NE +LAS +DR + WDL K + S + E GP
Sbjct: 178 AGKM-MSEFPGHTGPVNVVEFHP-NEYLLASGSSDRTIRFWDLEKF-QVVSCIEGEPGPV 234
Query: 241 E-LLF------IHGGHTAKISDFSWNP 260
+LF ++ G + + W P
Sbjct: 235 RSVLFNPDGCCLYSGCQDSLRVYGWEP 261
Score = 150 (57.9 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 36/131 (27%), Positives = 65/131 (49%)
Query: 116 ESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVA 175
E L + + + +WD + + + T+ H A + L F+PY E++ A+GS D +
Sbjct: 75 EELIVAGSQSGSIRVWDLEAAKILR---TLMGHKANICSLDFHPYGEFV-ASGSQDTNIK 130
Query: 176 LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDA 235
LWD+R K + + H + +++SP + LAS+ D + +WDL+ G+ S
Sbjct: 131 LWDIRR-KGCVFRYRGHSQAVRCLRFSPDGKW-LASAADDHTVKLWDLTA-GKMMSEFPG 187
Query: 236 EDGPPELLFIH 246
GP ++ H
Sbjct: 188 HTGPVNVVEFH 198
>FB|FBgn0046222 [details] [associations]
symbol:CG1109 species:7227 "Drosophila melanogaster"
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:Q04724
GeneTree:ENSGT00540000070914 KO:K15542 EMBL:AY051695
RefSeq:NP_730982.1 RefSeq:NP_730983.1 UniGene:Dm.4508 SMR:Q9VNG2
STRING:Q9VNG2 EnsemblMetazoa:FBtr0078713 EnsemblMetazoa:FBtr0078714
GeneID:40698 KEGG:dme:Dmel_CG1109 UCSC:CG1109-RA
FlyBase:FBgn0046222 InParanoid:Q9VNG2 OMA:TLRIWDF OrthoDB:EOG49ZW47
GenomeRNAi:40698 NextBio:820117 Uniprot:Q9VNG2
Length = 807
Score = 160 (61.4 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 49/162 (30%), Positives = 74/162 (45%)
Query: 109 VAWHLLHESLF-GSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILAT 167
V WH + GS + Q + IWD +S ++ T+ AH + V L +N + L T
Sbjct: 277 VHWHPQKGMIVSGSKDNQQPIKIWDPKS-GIALA--TLHAHKSTVMDLKWNDNGNW-LVT 332
Query: 168 GSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIG 227
S D + L+D+RNL+ ++ F HK E V W P +E + S G+D + W++
Sbjct: 333 ASRDHLLKLFDIRNLREEVQVFRGHKKEASSVSWHPIHEGLFCSGGSDGSILFWNVGTDK 392
Query: 228 EEQSTEDAEDGPPELLFIHG-GHT--AKISDFS---WNPNEP 263
E E A D L H GH + +D + W N P
Sbjct: 393 EIGCVETAHDSIVWTLAWHPLGHILCSGSNDHTIKFWTRNRP 434
Score = 120 (47.3 bits), Expect = 0.00069, P = 0.00069
Identities = 30/116 (25%), Positives = 60/116 (51%)
Query: 116 ESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSAD--KT 173
+S F S +DD L IWD + + H A+V C+ ++P I++ GS D +
Sbjct: 241 DSKFVSGSDDGTLRIWDFMR---CQEERVLRGHGADVKCVHWHPQKGMIVS-GSKDNQQP 296
Query: 174 VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEE 229
+ +WD ++ + L + +HK + ++W+ + ++ +S D L ++D+ + EE
Sbjct: 297 IKIWDPKS-GIALATLHAHKSTVMDLKWNDNGNWLVTAS-RDHLLKLFDIRNLREE 350
>UNIPROTKB|F1MFD6 [details] [associations]
symbol:CORO7 "Coronin" species:9913 "Bos taurus"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005794 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00550000074317 InterPro:IPR015505
InterPro:IPR015049 PANTHER:PTHR10856 Pfam:PF08954 IPI:IPI00685445
UniGene:Bt.24770 OMA:EVEFARC EMBL:DAAA02057333
Ensembl:ENSBTAT00000012121 Uniprot:F1MFD6
Length = 915
Score = 160 (61.4 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 44/160 (27%), Positives = 77/160 (48%)
Query: 108 DVAWHLLHESLFGSVADDQKLMIW----DTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEY 163
D+AW +D ++ +W D ++ P + HT ++ L F+P +
Sbjct: 540 DLAWDPFDPHRLAVAGEDARIRLWRVPPDGLQEVLTMPEAVLTGHTEKIYSLRFHPLAAD 599
Query: 164 ILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDL 223
+LA+ S D TV +WDL+ +L + H+D+IF + WSP + LA+ D RL +++
Sbjct: 600 VLASSSYDLTVRIWDLKVGAEQLR-LQGHRDQIFGLAWSPDGQQ-LATVCKDGRLRIYE- 656
Query: 224 SKIGEEQSTEDAEDGP-PE------LLFIHGGHTAKISDF 256
S E ++GP PE ++++ GH +S F
Sbjct: 657 ----PRGSPEPLQEGPGPEGARGARVVWVCDGHYLLVSGF 692
>UNIPROTKB|Q0V8F1 [details] [associations]
symbol:CORO7 "Coronin-7" species:9913 "Bos taurus"
[GO:0051015 "actin filament binding" evidence=IRD] [GO:0030036
"actin cytoskeleton organization" evidence=IRD] [GO:0015629 "actin
cytoskeleton" evidence=IRD] [GO:0005794 "Golgi apparatus"
evidence=ISS] [GO:0016023 "cytoplasmic membrane-bounded vesicle"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0000139
"Golgi membrane" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 GO:GO:0005794
GO:GO:0000139 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 GO:GO:0016023 InterPro:IPR015505 InterPro:IPR015049
PANTHER:PTHR10856 Pfam:PF08954 EMBL:BT026268 IPI:IPI00685445
RefSeq:NP_001069371.1 UniGene:Bt.24770 ProteinModelPortal:Q0V8F1
PRIDE:Q0V8F1 GeneID:527934 KEGG:bta:527934 CTD:79585
HOGENOM:HOG000006535 HOVERGEN:HBG051080 InParanoid:Q0V8F1
OrthoDB:EOG49S65R NextBio:20874698 Uniprot:Q0V8F1
Length = 915
Score = 160 (61.4 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 44/160 (27%), Positives = 77/160 (48%)
Query: 108 DVAWHLLHESLFGSVADDQKLMIW----DTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEY 163
D+AW +D ++ +W D ++ P + HT ++ L F+P +
Sbjct: 540 DLAWDPFDPHRLAVAGEDARIRLWRVPPDGLQEVLTMPEAVLTGHTEKIYSLRFHPLAAD 599
Query: 164 ILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDL 223
+LA+ S D TV +WDL+ +L + H+D+IF + WSP + LA+ D RL +++
Sbjct: 600 VLASSSYDLTVRIWDLKVGAEQLR-LQGHRDQIFGLAWSPDGQQ-LATVCKDGRLRIYE- 656
Query: 224 SKIGEEQSTEDAEDGP-PE------LLFIHGGHTAKISDF 256
S E ++GP PE ++++ GH +S F
Sbjct: 657 ----PRGSPEPLQEGPGPEGARGARVVWVCDGHYLLVSGF 692
>UNIPROTKB|F1RK53 [details] [associations]
symbol:LOC100513346 "Coronin" species:9823 "Sus scrofa"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005794 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00550000074317 InterPro:IPR015505
InterPro:IPR015049 PANTHER:PTHR10856 Pfam:PF08954 OMA:EVEFARC
EMBL:FP475964 Ensembl:ENSSSCT00000008707 ArrayExpress:F1RK53
Uniprot:F1RK53
Length = 923
Score = 160 (61.4 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 43/160 (26%), Positives = 77/160 (48%)
Query: 108 DVAWHLLHESLFGSVADDQKLMIWDTRSHNVSK----PSHTVDAHTAEVNCLSFNPYSEY 163
D+AW +D ++ +W + + P + HT ++ L F+P +
Sbjct: 547 DLAWDPFDLHRLAVAGEDARIRLWRVPPEGLEEVLTTPEAVLTGHTEKIYSLRFHPLAAD 606
Query: 164 ILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDL 223
+LA+ S D T+ +WDL+ +L + H+D+IF + WSP+ + LA+ D RL V++
Sbjct: 607 VLASSSYDLTIRIWDLQAGVERLR-LQGHRDQIFGLAWSPNGQQ-LATVCKDGRLRVYE- 663
Query: 224 SKIGEEQSTEDAEDGP-PE------LLFIHGGHTAKISDF 256
S E ++GP PE ++++ GH +S F
Sbjct: 664 ----PRSSPEPLQEGPGPEGARGARVVWVCDGHCLLVSGF 699
>UNIPROTKB|B4JW81 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7222 "Drosophila grimshawi"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CH916375 OMA:SWKCVCT OrthoDB:EOG45DV4X
RefSeq:XP_001995147.1 ProteinModelPortal:B4JW81 STRING:B4JW81
EnsemblMetazoa:FBtr0158402 GeneID:6569131 KEGG:dgr:Dgri_GH22988
FlyBase:FBgn0130445 InParanoid:B4JW81 Uniprot:B4JW81
Length = 331
Score = 153 (58.9 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 43/177 (24%), Positives = 80/177 (45%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATG 168
VAWH S F S +D+ + IW + + + D H + + ++P EY LA+
Sbjct: 20 VAWHPKGNS-FASCGEDKAIRIWSQSGNTWTTKTILSDGHKRTIREVRWSPCGEY-LASA 77
Query: 169 SADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGE 228
S D T A+W L E H++E+ V WS + +LA+ D+ + +W+++ G+
Sbjct: 78 SFDATTAIWSKHECNATL---EGHENEVKSVSWS-QSGGLLATCSRDKSVWIWEVA--GD 131
Query: 229 EQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSD 285
++ E + HT + W+P++ + + ++ I + DSD
Sbjct: 132 DEF---------ECAAVLNAHTQDVKRVVWHPSKEILASASYDNTIKMYAESALDSD 179
>MGI|MGI:1346998 [details] [associations]
symbol:Ciao1 "cytosolic iron-sulfur protein assembly 1"
species:10090 "Mus musculus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0007059 "chromosome segregation" evidence=IEA]
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISO]
[GO:0071817 "MMXD complex" evidence=ISO] [GO:0097361 "CIA complex"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1346998 GO:GO:0007059 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0003700 GO:GO:0006357 GO:GO:0016226 GO:GO:0071817 HSSP:P16649
HOGENOM:HOG000208901 OMA:SWKCVCT CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 ChiTaRS:CIAO1 EMBL:AK002314 EMBL:AK028376
EMBL:AL845368 EMBL:BC004089 IPI:IPI00320161 RefSeq:NP_079572.2
UniGene:Mm.45179 ProteinModelPortal:Q99KN2 SMR:Q99KN2 IntAct:Q99KN2
STRING:Q99KN2 PhosphoSite:Q99KN2 PaxDb:Q99KN2 PRIDE:Q99KN2
Ensembl:ENSMUST00000003759 GeneID:26371 KEGG:mmu:26371
UCSC:uc008mfb.2 InParanoid:Q99KN2 NextBio:304265 Bgee:Q99KN2
Genevestigator:Q99KN2 Uniprot:Q99KN2
Length = 339
Score = 153 (58.9 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 44/176 (25%), Positives = 82/176 (46%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATG 168
+AW+ +L S D+K+ IW T + S + H V ++++P Y LA+
Sbjct: 22 LAWNP-SGTLLASCGGDRKIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNY-LASA 79
Query: 169 SADKTVALWDLRNLKLK-LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIG 227
S D T +W + + + E H++E+ V W+P +LA+ D+ + VW++
Sbjct: 80 SFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGN-LLATCSRDKSVWVWEV---- 134
Query: 228 EEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTD 283
D ED E + + HT + W+P++ ++ S S D+ ++ Y + D
Sbjct: 135 ------DEED-EYECVSVLSSHTQDVKHVVWHPSQE-LLASASYDDTVKLYQEEGD 182
Score = 129 (50.5 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 37/155 (23%), Positives = 71/155 (45%)
Query: 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166
+ VAW +L + + D+ + +W+ + + + +HT +V + ++P S+ +LA
Sbjct: 109 KSVAW-APSGNLLATCSRDKSVWVWEVDEEDEYECVSVLSSHTQDVKHVVWHP-SQELLA 166
Query: 167 TGSADKTVALWDLRNLK-LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 225
+ S D TV L+ + + E H+ ++ + + P + LAS DR + +W
Sbjct: 167 SASYDDTVKLYQEEGDDWVCCATLEGHESTVWSIAFDPSGQR-LASCSDDRTVRIWRQYL 225
Query: 226 IGEEQSTEDAEDGPPE--LLFIHGGHTAKISDFSW 258
G EQ + P + + G HT I D +W
Sbjct: 226 PGNEQGVACSGSDPSWKCICTLSGFHTRTIYDVAW 260
>RGD|1307285 [details] [associations]
symbol:Ciao1 "cytosolic iron-sulfur protein assembly 1"
species:10116 "Rattus norvegicus" [GO:0007059 "chromosome
segregation" evidence=IEA] [GO:0016226 "iron-sulfur cluster
assembly" evidence=ISO;ISS] [GO:0071817 "MMXD complex"
evidence=ISO;ISS] [GO:0097361 "CIA complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1307285 GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226
GO:GO:0071817 HSSP:P16649 HOGENOM:HOG000208901 OMA:SWKCVCT CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:BC088474 IPI:IPI00194647 RefSeq:NP_001008766.1
UniGene:Rn.108832 ProteinModelPortal:Q5M7T1 STRING:Q5M7T1
PRIDE:Q5M7T1 Ensembl:ENSRNOT00000017603 GeneID:29231 KEGG:rno:29231
UCSC:RGD:1307285 InParanoid:Q5M7T1 NextBio:608478
Genevestigator:Q5M7T1 Uniprot:Q5M7T1
Length = 339
Score = 153 (58.9 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 44/176 (25%), Positives = 82/176 (46%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATG 168
+AW+ +L S D+K+ IW T + S + H V ++++P Y LA+
Sbjct: 22 LAWNPTG-TLLASCGGDRKIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNY-LASA 79
Query: 169 SADKTVALWDLRNLKLK-LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIG 227
S D T +W + + + E H++E+ V W+P +LA+ D+ + VW++
Sbjct: 80 SFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGN-LLATCSRDKSVWVWEV---- 134
Query: 228 EEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTD 283
D ED E + + HT + W+P++ ++ S S D+ ++ Y + D
Sbjct: 135 ------DEED-EYECVSVLNSHTQDVKHVVWHPSQE-LLASASYDDTVKLYQEEGD 182
Score = 129 (50.5 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 37/155 (23%), Positives = 72/155 (46%)
Query: 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166
+ VAW +L + + D+ + +W+ + + +++HT +V + ++P S+ +LA
Sbjct: 109 KSVAW-APSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHP-SQELLA 166
Query: 167 TGSADKTVALWDLRNLK-LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 225
+ S D TV L+ + + E H+ ++ + + P + LAS DR + +W
Sbjct: 167 SASYDDTVKLYQEEGDDWVCCATLEGHESTVWSIAFDPSGQR-LASCSDDRTVRIWRQYL 225
Query: 226 IGEEQSTEDAEDGPPE--LLFIHGGHTAKISDFSW 258
G EQ + P + + G HT I D +W
Sbjct: 226 PGNEQGVACSGSDPSWKCVCTLSGFHTRTIYDVAW 260
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 163 (62.4 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 46/172 (26%), Positives = 86/172 (50%)
Query: 115 HESL-FGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKT 173
H+S S +D + IWDTR+ ++ + ++ H VN +SF+P S +LA+ S D+T
Sbjct: 399 HDSRRLASASDGGNVKIWDTRTGSLQ---NVLEGHDDCVNSVSFSPDSR-LLASASDDRT 454
Query: 174 VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTE 233
V +W L+ + E H D + V +S H+ ++AS+ D + +WD + + + + E
Sbjct: 455 VKIWHAATGSLQ-RTLEGHNDWVRSVVFS-HDSRLIASASDDMTVKIWDTATVPLQNNLE 512
Query: 234 DAEDGPPELLFIHGGHT-AKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDS 284
++ ++F H A SD + W + S +N ++ + D +S
Sbjct: 513 SHDNWVRSVVFSHDSRLLASASDDM--TVKIWDTATGSLENTLEGHDDRVNS 562
Score = 153 (58.9 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 48/172 (27%), Positives = 81/172 (47%)
Query: 115 HES-LFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKT 173
H+S L S + D + IWDT + S +T++ H V + F+ + +LA+ S D T
Sbjct: 273 HDSRLLASASGDGTVKIWDTAT---SFLQNTLEGHNEWVKSVVFS-HDSRLLASASDDGT 328
Query: 174 VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTE 233
V +WD L+ + H D + V +S H+ ++AS DR + +W+ + + E
Sbjct: 329 VKIWDTATGTLQ-RMLKGHNDSVRSVVFS-HDSRLIASGSNDRTVRIWETTTGLLRHTFE 386
Query: 234 DAEDGPPELLFIHGGHT-AKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDS 284
D ED + F H A SD N + W + S N+++ + D +S
Sbjct: 387 DHEDSVMAVSFAHDSRRLASASD-GGNV-KIWDTRTGSLQNVLEGHDDCVNS 436
Score = 142 (55.0 bits), Expect = 7.5e-06, P = 7.5e-06
Identities = 35/110 (31%), Positives = 60/110 (54%)
Query: 115 HES-LFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKT 173
H+S L S +DD + IWDT + ++ +T++ H VN +SF+P S +LA+ S D T
Sbjct: 525 HDSRLLASASDDMTVKIWDTATGSLE---NTLEGHDDRVNSVSFSPDSR-LLASASDDGT 580
Query: 174 VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDL 223
V +W ++ H+F+ + +S H +LAS+ D + +WD+
Sbjct: 581 VKIWYAATGTVQ-HTFDGSGRVAISLAFS-HTSNLLASAMDDGTVKIWDM 628
>UNIPROTKB|E2RFS7 [details] [associations]
symbol:ERCC8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0045739 "positive regulation of DNA repair"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0032403 "protein complex
binding" evidence=IEA] [GO:0031464 "Cul4A-RING ubiquitin ligase
complex" evidence=IEA] [GO:0016363 "nuclear matrix" evidence=IEA]
[GO:0010165 "response to X-ray" evidence=IEA] [GO:0009411 "response
to UV" evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IEA] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0000209
"protein polyubiquitination" evidence=IEA] [GO:0000109
"nucleotide-excision repair complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0009411 GO:GO:0006979 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004842 GO:GO:0016363
GO:GO:0000209 GO:GO:0010165 GO:GO:0045739 GO:GO:0051865
GO:GO:0006283 KO:K10570 GO:GO:0031464 GO:GO:0000109 CTD:1161
GeneTree:ENSGT00390000009065 OMA:TMLRGHY EMBL:AAEX03001458
RefSeq:XP_544353.1 ProteinModelPortal:E2RFS7
Ensembl:ENSCAFT00000011467 GeneID:487225 KEGG:cfa:487225
NextBio:20860845 Uniprot:E2RFS7
Length = 396
Score = 154 (59.3 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 48/188 (25%), Positives = 83/188 (44%)
Query: 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLS--FNPYS- 161
S + V W+ +F S + D+ L +WDT + T D E S +P +
Sbjct: 101 SVETVQWYPHDTGMFTSSSFDKTLKVWDTNT------LQTADVFNFEETVYSHHMSPVAT 154
Query: 162 -EYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHV 220
++A G+ V L DL++ H + H+ EI V WSP E +LA++ D R+ +
Sbjct: 155 KHCLVAVGTRGPKVQLCDLKSGSCS-HILQGHRQEILAVSWSPRCEYVLATASADSRVKL 213
Query: 221 WDLSKIGEEQSTEDAEDGPPELLF--IHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEY 278
WD+ + T D +G + H K++ + N+ + +V DN M+ +
Sbjct: 214 WDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFT-NDGLHLLTVGTDNRMRLW 272
Query: 279 CDSTDSDT 286
S+ +T
Sbjct: 273 NSSSGENT 280
>GENEDB_PFALCIPARUM|PFL1975c [details] [associations]
symbol:PFL1975c "hypothetical protein,
conserved" species:5833 "Plasmodium falciparum" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AE014188 HSSP:P46680 OMA:TALCTQW
RefSeq:XP_001350799.1 ProteinModelPortal:Q8I518 IntAct:Q8I518
MINT:MINT-1581047 EnsemblProtists:PFL1975c:mRNA GeneID:811447
KEGG:pfa:PFL1975c EuPathDB:PlasmoDB:PF3D7_1241100
HOGENOM:HOG000283504 ProtClustDB:CLSZ2432595 Uniprot:Q8I518
Length = 468
Score = 155 (59.6 bits), Expect = 5.3e-08, Sum P(2) = 5.3e-08
Identities = 40/140 (28%), Positives = 73/140 (52%)
Query: 87 ISILFFEIIFTQNFPFP-LSRQ--DVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSH 143
I IL + N+ F L++ D++ + L G AD +IWD ++ V K
Sbjct: 153 IVILSSALNLLDNYAFEGLTKNVLDISLSCCNTKLAGC-ADTCNPIIWDIKTRKVIKDLK 211
Query: 144 TVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSP 203
+ T ++CL++NP ++ I+A+G+ T++ WD+R K + S SHK + +++W+
Sbjct: 212 CKNIDTNNISCLAWNPIND-IVASGNRTHTISFWDIRMNK-PIISLNSHKANVNKIKWN- 268
Query: 204 HNETILASSGTDRRLHVWDL 223
+N L S D + +WD+
Sbjct: 269 NNGIYLLSCSKDSLIKLWDI 288
Score = 128 (50.1 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 47/191 (24%), Positives = 96/191 (50%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATG 168
+AW+ +++ + S + WD R ++KP ++++H A VN + +N Y+L+
Sbjct: 223 LAWNPIND-IVASGNRTHTISFWDIR---MNKPIISLNSHKANVNKIKWNNNGIYLLSC- 277
Query: 169 SADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNE-TILASSGTDRRLHVWDLS-KI 226
S D + LWD+RN KL L+S+++ D+I +++ + E T +A + H++ +
Sbjct: 278 SKDSLIKLWDIRNFKL-LYSYKN--DQIQNNKFTSNYEPTYIAWNPIQN--HIFSSADNK 332
Query: 227 GEEQ--STEDAEDGPPELLFIHG--GHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDST 282
G + ST D + ++ HG + IS WNP ++ S +D +++ + S+
Sbjct: 333 GNIKFYSTNDNKC-IQTIVSAHGIDNKISSISLLDWNPLGH-ILTSFGDDKLLKFWSTSS 390
Query: 283 DSDTKTMRLDS 293
+ +D+
Sbjct: 391 SGSIYSKEIDA 401
Score = 41 (19.5 bits), Expect = 5.3e-08, Sum P(2) = 5.3e-08
Identities = 11/40 (27%), Positives = 19/40 (47%)
Query: 353 SDRHSSDNDTEDLNSIWSMTDEQREYYKTQFHNLQRHKSV 392
+ R+ +D D+NS S++D Y+ N +K V
Sbjct: 415 NSRYINDEYMLDVNSNQSISDSDENDYQQNILNNNYYKVV 454
>UNIPROTKB|Q8I518 [details] [associations]
symbol:PFL1975c "Conserved Plasmodium protein"
species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AE014188 HSSP:P46680 OMA:TALCTQW
RefSeq:XP_001350799.1 ProteinModelPortal:Q8I518 IntAct:Q8I518
MINT:MINT-1581047 EnsemblProtists:PFL1975c:mRNA GeneID:811447
KEGG:pfa:PFL1975c EuPathDB:PlasmoDB:PF3D7_1241100
HOGENOM:HOG000283504 ProtClustDB:CLSZ2432595 Uniprot:Q8I518
Length = 468
Score = 155 (59.6 bits), Expect = 5.3e-08, Sum P(2) = 5.3e-08
Identities = 40/140 (28%), Positives = 73/140 (52%)
Query: 87 ISILFFEIIFTQNFPFP-LSRQ--DVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSH 143
I IL + N+ F L++ D++ + L G AD +IWD ++ V K
Sbjct: 153 IVILSSALNLLDNYAFEGLTKNVLDISLSCCNTKLAGC-ADTCNPIIWDIKTRKVIKDLK 211
Query: 144 TVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSP 203
+ T ++CL++NP ++ I+A+G+ T++ WD+R K + S SHK + +++W+
Sbjct: 212 CKNIDTNNISCLAWNPIND-IVASGNRTHTISFWDIRMNK-PIISLNSHKANVNKIKWN- 268
Query: 204 HNETILASSGTDRRLHVWDL 223
+N L S D + +WD+
Sbjct: 269 NNGIYLLSCSKDSLIKLWDI 288
Score = 128 (50.1 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 47/191 (24%), Positives = 96/191 (50%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATG 168
+AW+ +++ + S + WD R ++KP ++++H A VN + +N Y+L+
Sbjct: 223 LAWNPIND-IVASGNRTHTISFWDIR---MNKPIISLNSHKANVNKIKWNNNGIYLLSC- 277
Query: 169 SADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNE-TILASSGTDRRLHVWDLS-KI 226
S D + LWD+RN KL L+S+++ D+I +++ + E T +A + H++ +
Sbjct: 278 SKDSLIKLWDIRNFKL-LYSYKN--DQIQNNKFTSNYEPTYIAWNPIQN--HIFSSADNK 332
Query: 227 GEEQ--STEDAEDGPPELLFIHG--GHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDST 282
G + ST D + ++ HG + IS WNP ++ S +D +++ + S+
Sbjct: 333 GNIKFYSTNDNKC-IQTIVSAHGIDNKISSISLLDWNPLGH-ILTSFGDDKLLKFWSTSS 390
Query: 283 DSDTKTMRLDS 293
+ +D+
Sbjct: 391 SGSIYSKEIDA 401
Score = 41 (19.5 bits), Expect = 5.3e-08, Sum P(2) = 5.3e-08
Identities = 11/40 (27%), Positives = 19/40 (47%)
Query: 353 SDRHSSDNDTEDLNSIWSMTDEQREYYKTQFHNLQRHKSV 392
+ R+ +D D+NS S++D Y+ N +K V
Sbjct: 415 NSRYINDEYMLDVNSNQSISDSDENDYQQNILNNNYYKVV 454
>UNIPROTKB|O76071 [details] [associations]
symbol:CIAO1 "Probable cytosolic iron-sulfur protein
assembly protein CIAO1" species:9606 "Homo sapiens" [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0016226 "iron-sulfur
cluster assembly" evidence=IGI] [GO:0071817 "MMXD complex"
evidence=IDA] [GO:0097361 "CIA complex" evidence=IDA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0008284 "positive regulation of cell
proliferation" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008284 eggNOG:COG2319
GO:GO:0006357 GO:GO:0016226 GO:GO:0071817 HOGENOM:HOG000208901
OMA:SWKCVCT CTD:9391 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:U63810 EMBL:EF011618 EMBL:AC004020 EMBL:CR456802
EMBL:AK223257 EMBL:BC001395 EMBL:BC032812 IPI:IPI00008791
RefSeq:NP_004795.1 UniGene:Hs.12109 PDB:3FM0 PDBsum:3FM0
ProteinModelPortal:O76071 SMR:O76071 IntAct:O76071
MINT:MINT-1416717 STRING:O76071 PhosphoSite:O76071 PaxDb:O76071
PeptideAtlas:O76071 PRIDE:O76071 DNASU:9391 Ensembl:ENST00000488633
GeneID:9391 KEGG:hsa:9391 UCSC:uc002svs.3 GeneCards:GC02P096931
HGNC:HGNC:14280 HPA:HPA017882 MIM:604333 neXtProt:NX_O76071
PharmGKB:PA162382269 InParanoid:O76071 PhylomeDB:O76071
ChiTaRS:CIAO1 EvolutionaryTrace:O76071 GenomeRNAi:9391
NextBio:35187 Bgee:O76071 CleanEx:HS_CIAO1 Genevestigator:O76071
GermOnline:ENSG00000144021 Uniprot:O76071
Length = 339
Score = 151 (58.2 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 43/176 (24%), Positives = 82/176 (46%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATG 168
+AW+ +L S D+++ IW T + S + H V ++++P Y LA+
Sbjct: 22 LAWNPAG-TLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNY-LASA 79
Query: 169 SADKTVALWDLRNLKLK-LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIG 227
S D T +W + + + E H++E+ V W+P +LA+ D+ + VW++
Sbjct: 80 SFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGN-LLATCSRDKSVWVWEV---- 134
Query: 228 EEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTD 283
D ED E + + HT + W+P++ ++ S S D+ ++ Y + D
Sbjct: 135 ------DEED-EYECVSVLNSHTQDVKHVVWHPSQE-LLASASYDDTVKLYREEED 182
Score = 126 (49.4 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 36/155 (23%), Positives = 74/155 (47%)
Query: 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166
+ VAW +L + + D+ + +W+ + + +++HT +V + ++P S+ +LA
Sbjct: 109 KSVAW-APSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHP-SQELLA 166
Query: 167 TGSADKTVALW-DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 225
+ S D TV L+ + + + + E H+ ++ + + P + LAS DR + +W
Sbjct: 167 SASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQR-LASCSDDRTVRIWRQYL 225
Query: 226 IGEEQSTEDAEDGPPE--LLFIHGGHTAKISDFSW 258
G EQ + P + + G H+ I D +W
Sbjct: 226 PGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAW 260
>ZFIN|ZDB-GENE-040426-2044 [details] [associations]
symbol:cdc20 "cell division cycle 20 homolog"
species:7955 "Danio rerio" [GO:0051301 "cell division"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-2044 GO:GO:0051301
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 HSSP:P16649 KO:K03363 CTD:991 HOVERGEN:HBG001024
EMBL:BC054907 IPI:IPI00611755 RefSeq:NP_998245.1 UniGene:Dr.105018
ProteinModelPortal:Q7SYD7 STRING:Q7SYD7 GeneID:406353
KEGG:dre:406353 InParanoid:Q7SYD7 NextBio:20817971
ArrayExpress:Q7SYD7 Uniprot:Q7SYD7
Length = 496
Score = 154 (59.3 bits), Expect = 6.3e-08, P = 6.3e-08
Identities = 39/139 (28%), Positives = 65/139 (46%)
Query: 125 DQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKL 184
D K+ +WD + K ++D H+A V CLS+N ++IL++GS + D+R
Sbjct: 248 DCKVELWDVQ---YQKRLRSMDGHSARVGCLSWN---DHILSSGSRSGLIHQHDVRVADH 301
Query: 185 KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLF 244
+ +F H E+ + WSP LAS G D +++W ++ E Q+ +
Sbjct: 302 HIFTFGGHTQEVCGLTWSPDGR-YLASGGNDNMMYIWPMTTGSENQAIHALSE------- 353
Query: 245 IHGGHTAKISDFSWNPNEP 263
H G ++ W PN P
Sbjct: 354 -HQGAVKALAWCPWQPNIP 371
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 155 (59.6 bits), Expect = 6.3e-08, P = 6.3e-08
Identities = 40/119 (33%), Positives = 59/119 (49%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
S + D + +WD R H+ V CL F+P ++ LA+ + D TV LWDL
Sbjct: 122 SGSQDTNIKLWDIRRKGCV---FRYRGHSQAVRCLRFSPDGKW-LASAADDHTVKLWDLT 177
Query: 181 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGP 239
K+ + F H + V++ P NE +LAS +DR + WDL K + S + E GP
Sbjct: 178 AGKM-MSEFPGHTGPVNVVEFHP-NEYLLASGSSDRTIRFWDLEKF-QVVSCIEGEPGP 233
Score = 150 (57.9 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 36/131 (27%), Positives = 65/131 (49%)
Query: 116 ESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVA 175
E L + + + +WD + + + T+ H A + L F+PY E++ A+GS D +
Sbjct: 75 EELIVAGSQSGSIRVWDLEAAKILR---TLMGHKANICSLDFHPYGEFV-ASGSQDTNIK 130
Query: 176 LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDA 235
LWD+R K + + H + +++SP + LAS+ D + +WDL+ G+ S
Sbjct: 131 LWDIRR-KGCVFRYRGHSQAVRCLRFSPDGKW-LASAADDHTVKLWDLTA-GKMMSEFPG 187
Query: 236 EDGPPELLFIH 246
GP ++ H
Sbjct: 188 HTGPVNVVEFH 198
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 150 (57.9 bits), Expect = 6.7e-08, P = 6.7e-08
Identities = 38/120 (31%), Positives = 63/120 (52%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
S +DD+ L +WD + ++ K T+ HT C++FNP S I++ GS D+TV +WD+
Sbjct: 88 SASDDKTLKLWDVETGSLIK---TLIGHTNYAFCVNFNPQSNMIVS-GSFDETVRIWDVT 143
Query: 181 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPP 240
K L +H D + V ++ + +++ SS D +WD S G T ++ PP
Sbjct: 144 TGKC-LKVLPAHSDPVTAVDFN-RDGSLIVSSSYDGLCRIWD-SGTGHCVKTLIDDENPP 200
>UNIPROTKB|A7RWD2 [details] [associations]
symbol:v1g226592 "Probable cytosolic iron-sulfur protein
assembly protein" species:45351 "Nematostella vectensis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:DS469546
RefSeq:XP_001636358.1 UniGene:Nve.10750 ProteinModelPortal:A7RWD2
STRING:A7RWD2 EnsemblMetazoa:NEMVEDRAFT_v1g226592-RA GeneID:5516269
KEGG:nve:NEMVE_v1g226592 Uniprot:A7RWD2
Length = 327
Score = 150 (57.9 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 43/176 (24%), Positives = 81/176 (46%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATG 168
VAW + + S D+ + IW + D H + L ++P + LA+
Sbjct: 11 VAWSP-NGFVLASCGGDKTIRIWGKEGDKWICKTILEDGHQRTIRSLGWSPCGTF-LASA 68
Query: 169 SADKTVALWDLRNLKLKLHS-FESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIG 227
S D T +WD ++ + + ++ E H++E+ V WS ++LA+ G D+ + +W++
Sbjct: 69 SFDATTCIWDQKSGEFECNATLEGHENEVKSVDWSVSG-SLLATCGRDKSVWIWEVQ--- 124
Query: 228 EEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTD 283
E+ E A IH HT + W+P + ++ S S D+ ++ Y + D
Sbjct: 125 EDDEYECAS-------VIHS-HTQDVKKVVWHPTKE-ILASCSYDDTIKLYKEDED 171
Score = 114 (45.2 bits), Expect = 0.00083, P = 0.00083
Identities = 38/183 (20%), Positives = 84/183 (45%)
Query: 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166
+ V W + SL + D+ + IW+ + + + + + +HT +V + ++P E ILA
Sbjct: 98 KSVDWSV-SGSLLATCGRDKSVWIWEVQEDDEYECASVIHSHTQDVKKVVWHPTKE-ILA 155
Query: 167 TGSADKTVALW--DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLS 224
+ S D T+ L+ D + + E H+ ++ + + + I++ S D+ + +W
Sbjct: 156 SCSYDDTIKLYKEDEDDWSC-CDTLEGHESTVWSISFDGSGDRIVSCSD-DKTVRIWKSY 213
Query: 225 KIGEEQSTEDAEDGPPE--LLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDST 282
G ++ + + + G H I D W+ +I + S D+ ++ + + T
Sbjct: 214 PPGNQEGVVVSGKHTKWKCVCVLSGYHDRTIYDVHWS-KVSGLIATASGDDCIRIFKEDT 272
Query: 283 DSD 285
+SD
Sbjct: 273 NSD 275
>MGI|MGI:2183448 [details] [associations]
symbol:Coro6 "coronin 6" species:10090 "Mus musculus"
[GO:0015629 "actin cytoskeleton" evidence=IBA] [GO:0030036 "actin
cytoskeleton organization" evidence=IBA] [GO:0051015 "actin
filament binding" evidence=IBA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:2183448 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0015629 eggNOG:COG2319 GO:GO:0051015 EMBL:AL607072
GeneTree:ENSGT00550000074317 HOVERGEN:HBG059978 InterPro:IPR015505
InterPro:IPR015048 InterPro:IPR015049 PANTHER:PTHR10856
Pfam:PF08953 Pfam:PF08954 CTD:84940 ChiTaRS:CORO6 EMBL:AB070894
EMBL:AB070895 EMBL:AB070896 EMBL:AK158179 IPI:IPI00120764
IPI:IPI00263646 IPI:IPI00648746 IPI:IPI00974745 RefSeq:NP_624354.1
RefSeq:NP_624355.1 RefSeq:NP_624356.1 UniGene:Mm.33477
ProteinModelPortal:Q920M5 SMR:Q920M5 PhosphoSite:Q920M5
PaxDb:Q920M5 PRIDE:Q920M5 Ensembl:ENSMUST00000021190
Ensembl:ENSMUST00000079770 Ensembl:ENSMUST00000102493
Ensembl:ENSMUST00000108390 Ensembl:ENSMUST00000108391 GeneID:216961
KEGG:mmu:216961 UCSC:uc007kgq.1 UCSC:uc007kgr.1 UCSC:uc007kgs.1
OMA:PFYDADS NextBio:375460 Bgee:Q920M5 CleanEx:MM_CORO6
Genevestigator:Q920M5 GermOnline:ENSMUSG00000020836 Uniprot:Q920M5
Length = 471
Score = 153 (58.9 bits), Expect = 7.4e-08, P = 7.4e-08
Identities = 45/195 (23%), Positives = 93/195 (47%)
Query: 108 DVAWHLLHESLFGSVADDQKLMIWD----TRSHNVSKPSHTVDAHTAEVNCLSFNPYSEY 163
D+ W ++++ S +DD +M+W T N+++P T++ H+ V LS++P +
Sbjct: 86 DIDWCPHNDNVIASASDDTTVMVWQIPDYTPVRNITEPVITLEGHSKRVGILSWHPTARN 145
Query: 164 ILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWD- 222
+L + D + +W++ ++ L + H D I V W+ N ++LA++ D+ L + D
Sbjct: 146 VLLSAGGDNVIIIWNVGTGEVLLSLDDIHPDVIHSVCWNS-NGSLLATTCKDKTLRIIDP 204
Query: 223 -LSKIGEEQSTEDAEDGPPELLFIHGGHT-----AKISDFS---WNPN---EPWVICSVS 270
S++ E++ P +F G +++S+ W+PN EP + +
Sbjct: 205 RKSQVVAERARPHEGARPLRAVFTADGKLLSTGFSRMSERQLALWDPNNFEEPVALQEMD 264
Query: 271 EDN-IMQEYCDSTDS 284
N ++ + D S
Sbjct: 265 TSNGVLLPFYDPDSS 279
>UNIPROTKB|C9JLV4 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9606 "Homo sapiens" [GO:0006952 "defense response"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0043531 "ADP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005794 GO:GO:0006952
GO:GO:0042981 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
InterPro:IPR011047 SUPFAM:SSF50998 Gene3D:1.10.533.10
InterPro:IPR011029 SUPFAM:SSF47986 EMBL:AC011248
HOGENOM:HOG000290173 HGNC:HGNC:576 EMBL:AC013283 IPI:IPI00953387
SMR:C9JLV4 STRING:C9JLV4 Ensembl:ENST00000339433
Ensembl:ENST00000549007 Uniprot:C9JLV4
Length = 1163
Score = 158 (60.7 bits), Expect = 7.6e-08, P = 7.6e-08
Identities = 36/108 (33%), Positives = 60/108 (55%)
Query: 125 DQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYIL-ATGSADKTVALWDLRNLK 183
D+K+ IW++ + + HT D H+ +VNC F S ++L ATGS+D + LWDL +
Sbjct: 678 DKKVKIWNSMTGELV---HTYDEHSEQVNCCHFTNSSHHLLLATGSSDCFLKLWDLNQKE 734
Query: 184 LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQS 231
+ F H + + ++SP ++ +LAS D L +WD + E +S
Sbjct: 735 CRNTMF-GHTNSVNHCRFSP-DDKLLASCSADGTLKLWDATSANERKS 780
>DICTYBASE|DDB_G0269728 [details] [associations]
symbol:ciao1 "putative cytosolic iron-sulfur assembly
protein" species:44689 "Dictyostelium discoideum" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0269728 EMBL:AAFI02000005
GenomeReviews:CM000150_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 OMA:SWKCVCT
HSSP:P63005 RefSeq:XP_646229.1 ProteinModelPortal:Q55DA2
STRING:Q55DA2 EnsemblProtists:DDB0266672 GeneID:8617183
KEGG:ddi:DDB_G0269728 ProtClustDB:CLSZ2497289 Uniprot:Q55DA2
Length = 333
Score = 150 (57.9 bits), Expect = 7.7e-08, P = 7.7e-08
Identities = 48/181 (26%), Positives = 83/181 (45%)
Query: 108 DVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILAT 167
++AWH E L + A+D+ + IW ++ +++ H V ++++P + LA
Sbjct: 29 NLAWHPNGEIL-ATCANDKYIQIWSKDTNGKWGLVQSLEGHEKTVRRVAWSPCGRF-LAG 86
Query: 168 GSADKTVALWDLRNLKLKL-H--SFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLS 224
S D + ++W+ +L+ H S E H E+ V W T+LA+ D+ + +W +
Sbjct: 87 ASFDASTSIWEKSKDELEFTHVSSLEGHTYEVKSVAWDSTG-TLLATCSRDKSIWIWQM- 144
Query: 225 KIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDS 284
ED D E L I+ GH I W+PNE + S +D I ++ D
Sbjct: 145 --------EDDNDF--ECLSINSGHGQDIKCVLWHPNEELLASSSYDDTI--KFWKDIDG 192
Query: 285 D 285
D
Sbjct: 193 D 193
Score = 127 (49.8 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 42/172 (24%), Positives = 74/172 (43%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATG 168
V WH +E L S + D + W + + +T+ H + + L+FN + +++ G
Sbjct: 166 VLWHP-NEELLASSSYDDTIKFWKDIDGDW-ECINTLTGHESSIWDLAFNKDGDKLVSCG 223
Query: 169 SADKTVALW--DLRNLK-LKLHSFESHKDE-IFQVQWSPHNETILASSGTDRRLHVWDLS 224
DK V W D N K + + F++ I+ + WS TI+ S D S
Sbjct: 224 E-DKLVLFWKFDKENEKWINIFKFKNENSRPIYSIDWSSLTNTIVTGSADD--------S 274
Query: 225 KIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276
I EQ ++D D +L H + ++ WNP ++ S +D ++
Sbjct: 275 IIFYEQESDDTPDKYKIILKKKNAHDSDVNCTKWNPKFKNILASCGDDGFIK 326
>UNIPROTKB|B5DG67 [details] [associations]
symbol:wdr12 "Ribosome biogenesis protein wdr12"
species:8030 "Salmo salar" [GO:0000463 "maturation of LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS] [GO:0005730
"nucleolus" evidence=ISS] [GO:0008283 "cell proliferation"
evidence=ISS] [GO:0030687 "preribosome, large subunit precursor"
evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 GO:GO:0000466
InterPro:IPR012972 Pfam:PF08154 HAMAP:MF_03029 EMBL:BT043626
ProteinModelPortal:B5DG67 Uniprot:B5DG67
Length = 423
Score = 152 (58.6 bits), Expect = 7.8e-08, P = 7.8e-08
Identities = 30/101 (29%), Positives = 56/101 (55%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
S + D+ + +WD RS + S ++ +H+ V + + P E+ L +GS D V LWD R
Sbjct: 314 SGSTDRHVRLWDPRSKDGSLVLLSLTSHSGWVTAVKWAPSHEHQLVSGSLDNLVKLWDTR 373
Query: 181 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVW 221
+ K L+ +H+D++ V W+ + ++ S G D +L+ +
Sbjct: 374 SCKAPLYDVSAHEDKVLCVDWT--DSRLMLSGGADNKLYTY 412
Score = 126 (49.4 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 35/104 (33%), Positives = 53/104 (50%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
S + D + +WD + +V K S T + N +S++P LA+GS D+ V LWD R
Sbjct: 273 SASWDHTIRLWDAETGSV-KTSLT---GSKVFNHISYSPLCRR-LASGSTDRHVRLWDPR 327
Query: 181 NL--KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWD 222
+ L L S SH + V+W+P +E L S D + +WD
Sbjct: 328 SKDGSLVLLSLTSHSGWVTAVKWAPSHEHQLVSGSLDNLVKLWD 371
>UNIPROTKB|B3KPW7 [details] [associations]
symbol:ERCC8 "DNA excision repair protein ERCC-8"
species:9606 "Homo sapiens" [GO:0009411 "response to UV"
evidence=IEA] [GO:0010165 "response to X-ray" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0009411 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010165
HOVERGEN:HBG005409 UniGene:Hs.435237 HGNC:HGNC:3439 EMBL:AC022445
EMBL:AC104113 EMBL:AK056931 IPI:IPI01015409 SMR:B3KPW7
STRING:B3KPW7 Ensembl:ENST00000426742 Uniprot:B3KPW7
Length = 338
Score = 150 (57.9 bits), Expect = 8.0e-08, P = 8.0e-08
Identities = 48/188 (25%), Positives = 82/188 (43%)
Query: 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLS--FNPYS- 161
S + V W+ +F S + D+ L +WDT + T D E S +P S
Sbjct: 43 SVETVQWYPHDTGMFTSSSFDKTLKVWDTNT------LQTADVFNFEETVYSHHMSPVST 96
Query: 162 -EYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHV 220
++A G+ V L DL++ H + H+ EI V WSP + ILA++ D R+ +
Sbjct: 97 KHCLVAVGTRGPKVQLCDLKSGSCS-HILQGHRQEILAVSWSPRYDYILATASADSRVKL 155
Query: 221 WDLSKIGEEQSTEDAEDGPPELLF--IHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEY 278
WD+ + T D +G + H K++ + ++ + +V DN M+ +
Sbjct: 156 WDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFT-SDGLHLLTVGTDNRMRLW 214
Query: 279 CDSTDSDT 286
S +T
Sbjct: 215 NSSNGENT 222
>UNIPROTKB|O60907 [details] [associations]
symbol:TBL1X "F-box-like/WD repeat-containing protein
TBL1X" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=IMP] [GO:0003714 "transcription
corepressor activity" evidence=IGI;IDA] [GO:0042393 "histone
binding" evidence=IDA] [GO:0017053 "transcriptional repressor
complex" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0008022 "protein
C-terminus binding" evidence=IPI] [GO:0005876 "spindle microtubule"
evidence=IDA] [GO:0000118 "histone deacetylase complex"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0007605 "sensory
perception of sound" evidence=IMP] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0008013 "beta-catenin binding"
evidence=IPI] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0007219 "Notch signaling pathway" evidence=TAS] [GO:0044255
"cellular lipid metabolic process" evidence=TAS] [GO:0044281 "small
molecule metabolic process" evidence=TAS] Reactome:REACT_111217
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Reactome:REACT_111102
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0044281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0007219 GO:GO:0044255 GO:GO:0006351 GO:GO:0000122
GO:GO:0044212 GO:GO:0007605 InterPro:IPR013720 Pfam:PF08513
GO:GO:0042393 GO:GO:0060070 GO:GO:0005876 KO:K04508 EMBL:AC003036
HOGENOM:HOG000220902 HOVERGEN:HBG050240 OrthoDB:EOG412M5M
EMBL:Y12781 EMBL:AK289409 EMBL:AK290962 EMBL:BC032708 EMBL:BC052304
IPI:IPI00218132 IPI:IPI00640917 RefSeq:NP_001132938.1
RefSeq:NP_001132939.1 RefSeq:NP_001132940.1 RefSeq:NP_005638.1
UniGene:Hs.495656 PDB:2XTC PDB:2XTD PDB:2XTE PDBsum:2XTC
PDBsum:2XTD PDBsum:2XTE ProteinModelPortal:O60907 SMR:O60907
IntAct:O60907 STRING:O60907 PhosphoSite:O60907 PaxDb:O60907
PRIDE:O60907 Ensembl:ENST00000217964 Ensembl:ENST00000380961
Ensembl:ENST00000407597 Ensembl:ENST00000424279
Ensembl:ENST00000536365 GeneID:6907 KEGG:hsa:6907 UCSC:uc004csq.4
CTD:6907 GeneCards:GC0XP009431 HGNC:HGNC:11585 HPA:CAB005363
MIM:300196 neXtProt:NX_O60907 PharmGKB:PA36349 InParanoid:O60907
OMA:RAHSVNN PhylomeDB:O60907 ChiTaRS:TBL1X EvolutionaryTrace:O60907
GenomeRNAi:6907 NextBio:27011 ArrayExpress:O60907 Bgee:O60907
CleanEx:HS_TBL1X Genevestigator:O60907 GermOnline:ENSG00000101849
Uniprot:O60907
Length = 577
Score = 154 (59.3 bits), Expect = 8.1e-08, P = 8.1e-08
Identities = 38/137 (27%), Positives = 70/137 (51%)
Query: 98 QNFPFPLSRQ-DVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLS 156
Q FPF + DV W + + F S + D + + +P T HT EVN +
Sbjct: 365 QQFPFHSAPALDVDWQ--NNTTFASCSTDMCIHVCRL---GCDRPVKTFQGHTNEVNAIK 419
Query: 157 FNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSP--------HNETI 208
++P S +LA+ S D T+ +W ++ ++ +H ++H EI+ ++WSP ++ +
Sbjct: 420 WDP-SGMLLASCSDDMTLKIWSMKQ-EVCIHDLQAHNKEIYTIKWSPTGPATSNPNSNIM 477
Query: 209 LASSGTDRRLHVWDLSK 225
LAS+ D + +WD+ +
Sbjct: 478 LASASFDSTVRLWDIER 494
Score = 140 (54.3 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 34/113 (30%), Positives = 55/113 (48%)
Query: 118 LFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSF--------NPYSEYILATGS 169
L S +DD L IW + H + AH E+ + + NP S +LA+ S
Sbjct: 426 LLASCSDDMTLKIWSMKQEVCI---HDLQAHNKEIYTIKWSPTGPATSNPNSNIMLASAS 482
Query: 170 ADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWD 222
D TV LWD+ + H+ H++ ++ V +SP + LAS D+ +H+W+
Sbjct: 483 FDSTVRLWDIER-GVCTHTLTKHQEPVYSVAFSPDGK-YLASGSFDKCVHIWN 533
Score = 121 (47.7 bits), Expect = 0.00034, P = 0.00034
Identities = 34/108 (31%), Positives = 58/108 (53%)
Query: 118 LFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALW 177
+ S + D + +WD V +HT+ H V ++F+P +Y LA+GS DK V +W
Sbjct: 477 MLASASFDSTVRLWDIE-RGVC--THTLTKHQEPVYSVAFSPDGKY-LASGSFDKCVHIW 532
Query: 178 DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 225
+ ++ L +HS+ IF+V W+ + + AS+ +D + V DL K
Sbjct: 533 NTQSGNL-VHSYRG-TGGIFEVCWNARGDKVGASA-SDGSVCVLDLRK 577
>UNIPROTKB|O14727 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9606 "Homo sapiens" [GO:0006952 "defense response"
evidence=IEA] [GO:0043531 "ADP binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=IEA] [GO:0051402 "neuron apoptotic process" evidence=IEA]
[GO:0001843 "neural tube closure" evidence=IEA] [GO:0006309
"apoptotic DNA fragmentation" evidence=IEA] [GO:0030900 "forebrain
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000166 "nucleotide binding" evidence=TAS]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=NAS] [GO:0008635
"activation of cysteine-type endopeptidase activity involved in
apoptotic process by cytochrome c" evidence=IDA;TAS] [GO:0042981
"regulation of apoptotic process" evidence=TAS] [GO:0043293
"apoptosome" evidence=IDA;TAS] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IDA] [GO:0097193 "intrinsic apoptotic signaling pathway"
evidence=TAS] [GO:0007399 "nervous system development"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006915
"apoptotic process" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] Reactome:REACT_578 InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 Pathway_Interaction_DB:p75ntrpathway GO:GO:0007399
GO:GO:0006952 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0000166 DrugBank:DB00171 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030900 GO:GO:0051402
Pathway_Interaction_DB:caspase_pathway EMBL:CH471054 GO:GO:0043531
GO:GO:0001843 GO:GO:0097193 GO:GO:0006309 GO:GO:0008656
GO:GO:0008635 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
OrthoDB:EOG43TZTP GO:GO:0043293 EMBL:AF013263 EMBL:AJ243003
EMBL:AJ243004 EMBL:AJ243005 EMBL:AJ243006 EMBL:AJ243007
EMBL:AJ243008 EMBL:AJ243009 EMBL:AJ243010 EMBL:AJ243011
EMBL:AJ243048 EMBL:AJ243107 EMBL:AF134397 EMBL:AF149794
EMBL:AB007873 EMBL:AB103079 EMBL:BC136531 EMBL:BC136532
EMBL:AJ133643 EMBL:AJ133644 EMBL:AJ133645 EMBL:AF248734
IPI:IPI00023630 IPI:IPI00217460 IPI:IPI00217461 IPI:IPI00217462
IPI:IPI00217463 IPI:IPI00375875 PIR:T03818 RefSeq:NP_001151.1
RefSeq:NP_037361.1 RefSeq:NP_863651.1 RefSeq:NP_863658.1
RefSeq:NP_863659.1 UniGene:Hs.552567 PDB:1C15 PDB:1CWW PDB:1CY5
PDB:1Z6T PDB:2P1H PDB:2YGS PDB:3IZA PDB:3YGS PDBsum:1C15
PDBsum:1CWW PDBsum:1CY5 PDBsum:1Z6T PDBsum:2P1H PDBsum:2YGS
PDBsum:3IZA PDBsum:3YGS ProteinModelPortal:O14727 SMR:O14727
DIP:DIP-27624N IntAct:O14727 MINT:MINT-96751 STRING:O14727
PhosphoSite:O14727 PaxDb:O14727 PRIDE:O14727
Ensembl:ENST00000333991 Ensembl:ENST00000357310
Ensembl:ENST00000359972 Ensembl:ENST00000547045
Ensembl:ENST00000550527 Ensembl:ENST00000551964
Ensembl:ENST00000552268 GeneID:317 KEGG:hsa:317 UCSC:uc001tfy.3
UCSC:uc001tfz.3 UCSC:uc001tga.3 UCSC:uc001tgb.3 UCSC:uc001tgc.3
CTD:317 GeneCards:GC12P099039 HGNC:HGNC:576 HPA:HPA031373
MIM:602233 neXtProt:NX_O14727 PharmGKB:PA24868 HOVERGEN:HBG018730
InParanoid:O14727 KO:K02084 OMA:KVCKNSA PhylomeDB:O14727
Pathway_Interaction_DB:hivnefpathway BindingDB:O14727
ChEMBL:CHEMBL1795093 EvolutionaryTrace:O14727 GenomeRNAi:317
NextBio:1287 PMAP-CutDB:O14727 ArrayExpress:O14727 Bgee:O14727
Genevestigator:O14727 GermOnline:ENSG00000120868 InterPro:IPR017251
PIRSF:PIRSF037646 Uniprot:O14727
Length = 1248
Score = 158 (60.7 bits), Expect = 8.3e-08, P = 8.3e-08
Identities = 36/108 (33%), Positives = 60/108 (55%)
Query: 125 DQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYIL-ATGSADKTVALWDLRNLK 183
D+K+ IW++ + + HT D H+ +VNC F S ++L ATGS+D + LWDL +
Sbjct: 678 DKKVKIWNSMTGELV---HTYDEHSEQVNCCHFTNSSHHLLLATGSSDCFLKLWDLNQKE 734
Query: 184 LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQS 231
+ F H + + ++SP ++ +LAS D L +WD + E +S
Sbjct: 735 CRNTMF-GHTNSVNHCRFSP-DDKLLASCSADGTLKLWDATSANERKS 780
>TAIR|locus:2117169 [details] [associations]
symbol:AT4G18900 "AT4G18900" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002687 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 KO:K14791 IPI:IPI00537780
RefSeq:NP_567565.1 UniGene:At.50695 ProteinModelPortal:F4JSB9
SMR:F4JSB9 PRIDE:F4JSB9 EnsemblPlants:AT4G18900.1 GeneID:827624
KEGG:ath:AT4G18900 OMA:GFDVRQA PhylomeDB:F4JSB9 Uniprot:F4JSB9
Length = 461
Score = 152 (58.6 bits), Expect = 9.2e-08, P = 9.2e-08
Identities = 45/170 (26%), Positives = 83/170 (48%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATG 168
+AW+ ++ S + D+K+ +WD + T++ HT EV +++N Y+ +L +G
Sbjct: 239 LAWNKEFRNILASASADKKVKVWDVATGTCKI---TMEHHTKEVQAVAWNHYAPEVLLSG 295
Query: 169 SADKTVALWDLRNLKLKLHS-FE-SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 226
S D+TV L D R HS F+ S ++ + W PH+E S D + +D+
Sbjct: 296 SFDQTVVLKDGRQPS---HSGFKWSVMSDVESLAWDPHSEHSFVVSLEDGTVKGFDV--- 349
Query: 227 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 276
Q++ A + P F GH + S+N + P ++ + S+D ++
Sbjct: 350 --RQASISASESNPS--FTINGHDEAATSVSYNISAPNLLATGSKDRTVK 395
Score = 148 (57.2 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 37/121 (30%), Positives = 60/121 (49%)
Query: 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVS----KPSHTVDAHTAEVNCLSFNPYSE 162
+ +AW E F +D + +D R ++S PS T++ H +S+N +
Sbjct: 323 ESLAWDPHSEHSFVVSLEDGTVKGFDVRQASISASESNPSFTINGHDEAATSVSYNISAP 382
Query: 163 YILATGSADKTVALWDLRNLKLK-LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVW 221
+LATGS D+TV LWDL N + + + + +F + +SP N +LA G L +W
Sbjct: 383 NLLATGSKDRTVKLWDLSNNEPSCIATHNPNAGGLFFIAFSPDNPFLLAMGGVMGELKLW 442
Query: 222 D 222
D
Sbjct: 443 D 443
>ASPGD|ASPL0000032475 [details] [associations]
symbol:AN5235 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] [GO:0070912 "Ddb1-Ckn1 complex" evidence=IEA]
[GO:0006283 "transcription-coupled nucleotide-excision repair"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 EMBL:BN001305 EMBL:AACD01000089
KO:K10570 OrthoDB:EOG4BS0W2 RefSeq:XP_662839.1
ProteinModelPortal:Q5B2J5 EnsemblFungi:CADANIAT00003235
GeneID:2871522 KEGG:ani:AN5235.2 HOGENOM:HOG000190060 OMA:HTHAITS
Uniprot:Q5B2J5
Length = 469
Score = 152 (58.6 bits), Expect = 9.5e-08, P = 9.5e-08
Identities = 35/100 (35%), Positives = 53/100 (53%)
Query: 141 PSHTVDAH-TAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQV 199
P HT T + LS +P S ++A G+++K V L DLR+ L H H + V
Sbjct: 152 PVHTFKLDCTPYAHSLSAHPSSPLLVAVGTSEKPVRLLDLRS-GLSTHGLPGHSSAVLSV 210
Query: 200 QWSPHNETILASSGTDRRLHVWDLSKIGEEQS--TEDAED 237
W+PH ILAS+ TD R+ ++D+ + G + T D +D
Sbjct: 211 SWAPHRPHILASASTDNRVILFDIRRAGHNSAIATLDMDD 250
>UNIPROTKB|Q9NVX2 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9606
"Homo sapiens" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602
OrthoDB:EOG4BCDMS EMBL:AK001320 EMBL:AB209111 EMBL:AC022916
EMBL:BC002884 EMBL:BC012075 EMBL:AJ005257 IPI:IPI00018196
IPI:IPI00556116 RefSeq:NP_001014445.1 RefSeq:NP_060566.2
UniGene:Hs.85570 ProteinModelPortal:Q9NVX2 SMR:Q9NVX2 IntAct:Q9NVX2
MINT:MINT-1474299 STRING:Q9NVX2 PhosphoSite:Q9NVX2 DMDM:296439488
SWISS-2DPAGE:Q9NVX2 PaxDb:Q9NVX2 PRIDE:Q9NVX2
Ensembl:ENST00000360831 Ensembl:ENST00000442241 GeneID:54475
KEGG:hsa:54475 UCSC:uc002hiy.1 UCSC:uc002hiz.1
GeneCards:GC17M033458 HGNC:HGNC:19889 HPA:HPA018807
neXtProt:NX_Q9NVX2 PharmGKB:PA142671263 GenomeRNAi:54475
NextBio:56780 ArrayExpress:Q9NVX2 Bgee:Q9NVX2 CleanEx:HS_NLE1
Genevestigator:Q9NVX2 GermOnline:ENSG00000073536 Uniprot:Q9NVX2
Length = 485
Score = 152 (58.6 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 38/126 (30%), Positives = 67/126 (53%)
Query: 103 PLSRQDVAWHLLHESLFG-------SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCL 155
PL+R L+++ LF S + D+ + +WD R+ K ++ H A V +
Sbjct: 364 PLTRMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRT---GKYLASLRGHVAAVYQI 420
Query: 156 SFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTD 215
+++ S +L +GS+D T+ +WD++ KL + H DE++ V WSP + + AS G D
Sbjct: 421 AWSADSR-LLVSGSSDSTLKVWDVKAQKLAM-DLPGHADEVYAVDWSPDGQRV-ASGGKD 477
Query: 216 RRLHVW 221
+ L +W
Sbjct: 478 KCLRIW 483
Score = 145 (56.1 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 36/103 (34%), Positives = 53/103 (51%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
S +DD L +W KP + H A +N + F+P S I+A+ S DK++ LWD R
Sbjct: 346 SGSDDFTLFLWSPAEDK--KPLTRMTGHQALINQVLFSPDSR-IVASASFDKSIKLWDGR 402
Query: 181 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDL 223
K L S H ++Q+ WS + +L S +D L VWD+
Sbjct: 403 TGKY-LASLRGHVAAVYQIAWSADSR-LLVSGSSDSTLKVWDV 443
Score = 118 (46.6 bits), Expect = 0.00058, P = 0.00058
Identities = 35/127 (27%), Positives = 62/127 (48%)
Query: 134 RSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHK 193
R V++ + +++ H+ V ++F+P +Y LA+GS D TV WDL + + + + H+
Sbjct: 99 RVRAVTRCTSSLEGHSEAVISVAFSPTGKY-LASGSGDTTVRFWDL-STETPHFTCKGHR 156
Query: 194 DEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKI 253
+ + WSP LAS + ++ +WD S G++ A GH+ I
Sbjct: 157 HWVLSISWSPDGRK-LASGCKNGQILLWDPST-GKQVGRTLA------------GHSKWI 202
Query: 254 SDFSWNP 260
+ SW P
Sbjct: 203 TGLSWEP 209
>UNIPROTKB|O59894 [details] [associations]
symbol:PEX7 "Peroxisomal targeting signal 2 receptor"
species:4922 "Komagataella pastoris" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005777 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015031 EMBL:AF021797
ProteinModelPortal:O59894 Uniprot:O59894
Length = 376
Score = 150 (57.9 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 44/168 (26%), Positives = 70/168 (41%)
Query: 115 HE-SLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKT 173
H+ ++ S D L +WDTR N ++C FN Y +++A+ DK
Sbjct: 195 HDPNIIMSCNSDSHLQLWDTRLPNPLFMDFVAHNGLEALSC-DFNRYRPFVVASAGVDKL 253
Query: 174 VALWDLRNLKLKLHS--------FESHKDEIFQVQWSPHNETILASSGTDRRLHVWD--- 222
+WD R ++ +HS F H+ I ++ WSPH T L + D + VW+
Sbjct: 254 AKVWDTRMIQPNVHSRPPRALNKFMGHEFAIRKLAWSPHGPTQLLTCSYDMTVRVWNDSP 313
Query: 223 --LSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNP-NEP-WVI 266
S++G P +F HT + W+ EP WV+
Sbjct: 314 SPTSRVGLLDGASQPHAPPCSKIF--SAHTEFVMGCDWSLWGEPGWVV 359
>UNIPROTKB|B8YE10 [details] [associations]
symbol:TBL1Y "Transducin (Beta)-like 1Y-linked"
species:9544 "Macaca mulatta" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] [GO:0007605 "sensory perception of
sound" evidence=ISS] [GO:0008013 "beta-catenin binding"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006508 GO:GO:0000122 GO:GO:0007605
InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393 GO:GO:0008013
GO:GO:0060070 GO:GO:0005876 KO:K04508 HOGENOM:HOG000220902
HOVERGEN:HBG050240 OrthoDB:EOG412M5M CTD:90665 EMBL:FJ527023
RefSeq:NP_001138540.1 UniGene:Mmu.17760 ProteinModelPortal:B8YE10
STRING:B8YE10 GeneID:100270702 KEGG:mcc:100270702 NextBio:19970520
Uniprot:B8YE10
Length = 520
Score = 152 (58.6 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 39/137 (28%), Positives = 69/137 (50%)
Query: 98 QNFPFPLSRQ-DVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLS 156
Q FPF + DV W + + F S + D + + +P T HT EVN +
Sbjct: 308 QQFPFHSAPALDVDWQ--NNTTFASCSTDMCIHVCRL---GCDRPVKTFQGHTNEVNAIK 362
Query: 157 FNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNET--------I 208
++P S +LA+ S D T+ +W ++ +H+ ++H+ EI+ ++WSP T +
Sbjct: 363 WDP-SGMLLASCSDDMTLKIWSMKQ-DACVHNLQAHRKEIYTIKWSPTGPTTSNPNSSIM 420
Query: 209 LASSGTDRRLHVWDLSK 225
LAS+ D + +WD+ +
Sbjct: 421 LASASFDSTVRLWDMEQ 437
Score = 141 (54.7 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 34/113 (30%), Positives = 55/113 (48%)
Query: 118 LFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSF--------NPYSEYILATGS 169
L S +DD L IW + H + AH E+ + + NP S +LA+ S
Sbjct: 369 LLASCSDDMTLKIWSMKQDACV---HNLQAHRKEIYTIKWSPTGPTTSNPNSSIMLASAS 425
Query: 170 ADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWD 222
D TV LWD+ + H+ H++ ++ V +SP + LAS D+ +H+W+
Sbjct: 426 FDSTVRLWDMEQ-GVCTHTLRKHQEPVYSVAFSPDGK-YLASGSFDKCVHIWN 476
Score = 122 (48.0 bits), Expect = 0.00023, P = 0.00023
Identities = 34/108 (31%), Positives = 59/108 (54%)
Query: 118 LFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALW 177
+ S + D + +WD V +HT+ H V ++F+P +Y LA+GS DK V +W
Sbjct: 420 MLASASFDSTVRLWDMEQ-GVC--THTLRKHQEPVYSVAFSPDGKY-LASGSFDKCVHIW 475
Query: 178 DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 225
+ ++ L +HS++ IF+V W+ + + AS+ +D + V DL K
Sbjct: 476 NTQSGSL-VHSYQG-TGGIFEVCWNAQGDKVGASA-SDGSVCVLDLRK 520
>UNIPROTKB|Q13216 [details] [associations]
symbol:ERCC8 "DNA excision repair protein ERCC-8"
species:9606 "Homo sapiens" [GO:0010165 "response to X-ray"
evidence=IEA] [GO:0006289 "nucleotide-excision repair"
evidence=IMP;TAS] [GO:0006979 "response to oxidative stress"
evidence=IDA;IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IDA]
[GO:0043234 "protein complex" evidence=IDA] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] [GO:0009411 "response to UV"
evidence=IMP;IDA] [GO:0045739 "positive regulation of DNA repair"
evidence=IMP] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=IDA;IMP;TAS] [GO:0003678 "DNA
helicase activity" evidence=IDA] [GO:0032403 "protein complex
binding" evidence=IDA] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IDA] [GO:0031464 "Cul4A-RING ubiquitin
ligase complex" evidence=IDA] [GO:0000109 "nucleotide-excision
repair complex" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0016363 "nuclear matrix" evidence=IDA] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0006281 "DNA repair" evidence=TAS]
Reactome:REACT_216 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 GO:GO:0009411 GO:GO:0005654
GO:GO:0006979 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0032403 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471123 GO:GO:0016363
GO:GO:0000209 GO:GO:0010165 GO:GO:0045739 GO:GO:0051865
GO:GO:0006283 HOGENOM:HOG000248233 KO:K10570 GO:GO:0031464 PDB:4A11
PDBsum:4A11 GO:GO:0000109 Orphanet:90321 Orphanet:90322
Orphanet:90324 Orphanet:178338 CTD:1161 HOVERGEN:HBG005409
OMA:TMLRGHY EMBL:U28413 EMBL:CR536563 EMBL:BT020021 EMBL:AY213194
EMBL:AK314511 EMBL:BC009793 IPI:IPI00012284 IPI:IPI00386696
PIR:A57090 RefSeq:NP_000073.1 UniGene:Hs.435237
ProteinModelPortal:Q13216 SMR:Q13216 DIP:DIP-291N IntAct:Q13216
MINT:MINT-1417899 STRING:Q13216 PhosphoSite:Q13216 DMDM:3121917
PRIDE:Q13216 DNASU:1161 Ensembl:ENST00000265038 GeneID:1161
KEGG:hsa:1161 UCSC:uc003jsl.3 UCSC:uc003jsn.3 GeneCards:GC05M060169
H-InvDB:HIX0004887 HGNC:HGNC:3439 MIM:216400 MIM:609412 MIM:614621
neXtProt:NX_Q13216 PharmGKB:PA27853 InParanoid:Q13216
OrthoDB:EOG4SN1NR PhylomeDB:Q13216 GenomeRNAi:1161 NextBio:4822
ArrayExpress:Q13216 Bgee:Q13216 CleanEx:HS_ERCC8
Genevestigator:Q13216 GermOnline:ENSG00000049167 Uniprot:Q13216
Length = 396
Score = 150 (57.9 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 48/188 (25%), Positives = 82/188 (43%)
Query: 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLS--FNPYS- 161
S + V W+ +F S + D+ L +WDT + T D E S +P S
Sbjct: 101 SVETVQWYPHDTGMFTSSSFDKTLKVWDTNT------LQTADVFNFEETVYSHHMSPVST 154
Query: 162 -EYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHV 220
++A G+ V L DL++ H + H+ EI V WSP + ILA++ D R+ +
Sbjct: 155 KHCLVAVGTRGPKVQLCDLKSGSCS-HILQGHRQEILAVSWSPRYDYILATASADSRVKL 213
Query: 221 WDLSKIGEEQSTEDAEDGPPELLF--IHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEY 278
WD+ + T D +G + H K++ + ++ + +V DN M+ +
Sbjct: 214 WDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFT-SDGLHLLTVGTDNRMRLW 272
Query: 279 CDSTDSDT 286
S +T
Sbjct: 273 NSSNGENT 280
>UNIPROTKB|B5X212 [details] [associations]
symbol:ciao1b "Probable cytosolic iron-sulfur protein
assembly protein ciao1-B" species:8030 "Salmo salar" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] [GO:0097361 "CIA
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016226 GO:GO:0097361 EMBL:BT045081
ProteinModelPortal:B5X212 Uniprot:B5X212
Length = 333
Score = 148 (57.2 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 43/176 (24%), Positives = 78/176 (44%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATG 168
VAW+ +L S D+ + IW + + D H V ++++P Y LA+
Sbjct: 22 VAWNP-KGTLLASCGGDRTIRIWGREGDSWECKTVLQDGHQRTVRKVAWSPCGNY-LASA 79
Query: 169 SADKTVALWDLRNLKLK-LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIG 227
S D T +W +N + L E H++E+ V W+P +LA+ D+ + +W++
Sbjct: 80 SFDATTCIWKKKNDDFECLTVLEGHENEVKCVAWAPSGN-LLATCSRDKSVWIWEVD--- 135
Query: 228 EEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTD 283
E+ E + + HT + W+P + ++ S S DN + Y + D
Sbjct: 136 --------EENEYECVSVVNSHTQDVKHVVWHPTQE-LLASCSYDNNVCVYKEEDD 182
>UNIPROTKB|Q4R8H1 [details] [associations]
symbol:TBL1X "F-box-like/WD repeat-containing protein
TBL1X" species:9541 "Macaca fascicularis" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0005876 "spindle microtubule" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0007605 "sensory
perception of sound" evidence=ISS] [GO:0008013 "beta-catenin
binding" evidence=ISS] [GO:0017053 "transcriptional repressor
complex" evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0006508 GO:GO:0006351 GO:GO:0000122 GO:GO:0007605
InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393 GO:GO:0008013
GO:GO:0060070 GO:GO:0005876 HSSP:P16649 EMBL:AB168481
ProteinModelPortal:Q4R8H1 Uniprot:Q4R8H1
Length = 569
Score = 152 (58.6 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 38/137 (27%), Positives = 69/137 (50%)
Query: 98 QNFPFPLSRQ-DVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLS 156
Q FPF + DV W + F S + D + + +P T HT EVN +
Sbjct: 357 QQFPFHSAPALDVDWQ--NNMTFASCSTDMCIHVCRL---GCDRPVKTFQGHTNEVNAIK 411
Query: 157 FNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSP--------HNETI 208
++P S +LA+ S D T+ +W ++ ++ +H ++H EI+ ++WSP ++ +
Sbjct: 412 WDP-SGMLLASCSDDMTLKIWSMKQ-EVCIHDLQAHNKEIYTIKWSPTGPATSNPNSNIM 469
Query: 209 LASSGTDRRLHVWDLSK 225
LAS+ D + +WD+ +
Sbjct: 470 LASASFDSTVRLWDIER 486
Score = 139 (54.0 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 34/113 (30%), Positives = 54/113 (47%)
Query: 118 LFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSF--------NPYSEYILATGS 169
L S +DD L IW + H + AH E+ + + NP S +LA+ S
Sbjct: 418 LLASCSDDMTLKIWSMKQEVCI---HDLQAHNKEIYTIKWSPTGPATSNPNSNIMLASAS 474
Query: 170 ADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWD 222
D TV LWD+ + H+ H++ ++ V +SP LAS D+ +H+W+
Sbjct: 475 FDSTVRLWDIER-GVCTHTLTKHQEPVYSVAFSPDGR-YLASGSFDKCVHIWN 525
Score = 120 (47.3 bits), Expect = 0.00044, P = 0.00044
Identities = 34/108 (31%), Positives = 57/108 (52%)
Query: 118 LFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALW 177
+ S + D + +WD V +HT+ H V ++F+P Y LA+GS DK V +W
Sbjct: 469 MLASASFDSTVRLWDIE-RGVC--THTLTKHQEPVYSVAFSPDGRY-LASGSFDKCVHIW 524
Query: 178 DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 225
+ ++ L +HS+ IF+V W+ + + AS+ +D + V DL K
Sbjct: 525 NTQSGNL-VHSYRG-TGGIFEVCWNARGDKVGASA-SDGSVCVLDLRK 569
>CGD|CAL0005179 [details] [associations]
symbol:orf19.5410 species:5476 "Candida albicans" [GO:0051010
"microtubule plus-end binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
[GO:0030473 "nuclear migration along microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0005179 GO:GO:0005737 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000922 GO:GO:0005874 EMBL:AACQ01000051
EMBL:AACQ01000050 KO:K01062 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 RefSeq:XP_717688.1
RefSeq:XP_717782.1 ProteinModelPortal:Q5A7Q6 STRING:Q5A7Q6
GeneID:3640588 GeneID:3640622 KEGG:cal:CaO19.12865
KEGG:cal:CaO19.5410 Uniprot:Q5A7Q6
Length = 486
Score = 151 (58.2 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 30/100 (30%), Positives = 54/100 (54%)
Query: 124 DDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLK 183
+D L IW+ + + + P + AHT +N + F Y LAT S+D T+ +WD +
Sbjct: 141 NDGNLYIWNISNDDNTIPEKMIKAHTRAINKICFTYKKPYYLATCSSDLTIKIWDEKFNH 200
Query: 184 LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDL 223
++ + H+ + +Q+SP + +IL S D+ + VWD+
Sbjct: 201 IR--TLNGHEHTVSSIQFSPVDNSILYSVSRDKNIRVWDI 238
>TAIR|locus:2122133 [details] [associations]
symbol:AT4G35370 "AT4G35370" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002687 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 KO:K14791 IPI:IPI00522472
RefSeq:NP_195263.4 UniGene:At.54614 ProteinModelPortal:F4JN04
SMR:F4JN04 PRIDE:F4JN04 EnsemblPlants:AT4G35370.1 GeneID:829690
KEGG:ath:AT4G35370 OMA:FRNIVAS Uniprot:F4JN04
Length = 433
Score = 150 (57.9 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 37/110 (33%), Positives = 64/110 (58%)
Query: 107 QDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 166
+ +AW E F D + +DTR+ ++S PS + AH +EV+ +S+N ++ +LA
Sbjct: 306 EKLAWDPHSEHSFVVSLKDGTVKGFDTRASDLS-PSFIIHAHDSEVSSISYNIHAPNLLA 364
Query: 167 TGSADKTVALWDLRNLKLK-LHSFESHKDEIFQVQWSPHNETILASSGTD 215
TGSAD++V LWDL N + + + + + E+F V +S +LA G++
Sbjct: 365 TGSADESVKLWDLSNNQPSWIATNKPNAGEVFSVSFSADCPFLLAVGGSE 414
Score = 145 (56.1 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 47/168 (27%), Positives = 85/168 (50%)
Query: 108 DVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILAT 167
D+AW+ ++ S ++D+K+ +WD + K T++ H +V+ +++N Y+ +L +
Sbjct: 221 DLAWNKEFRNIVASGSEDKKVKVWDVAT---GKCKVTMEHHEKKVHAVAWNNYTPEVLLS 277
Query: 168 GSADKTVALWDLR---NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLS 224
GS D+TV L D R N LK S E+ ++ ++ W PH+E S D + +D
Sbjct: 278 GSRDRTVVLKDGRDPSNSGLKW-STEA---KVEKLAWDPHSEHSFVVSLKDGTVKGFDTR 333
Query: 225 KIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED 272
A D P + IH H +++S S+N + P ++ + S D
Sbjct: 334 ----------ASDLSPSFI-IHA-HDSEVSSISYNIHAPNLLATGSAD 369
Score = 117 (46.2 bits), Expect = 0.00062, P = 0.00062
Identities = 31/93 (33%), Positives = 50/93 (53%)
Query: 144 TVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSP 203
T ++HT V L++N I+A+GS DK V +WD+ K K+ + E H+ ++ V W+
Sbjct: 211 TDNSHTGPVIDLAWNKEFRNIVASGSEDKKVKVWDVATGKCKV-TMEHHEKKVHAVAWNN 269
Query: 204 HNETILASSGTDRRLHVWD---LSKIGEEQSTE 233
+ +L S DR + + D S G + STE
Sbjct: 270 YTPEVLLSGSRDRTVVLKDGRDPSNSGLKWSTE 302
>CGD|CAL0000686 [details] [associations]
symbol:PEX7 species:5476 "Candida albicans" [GO:0006631
"fatty acid metabolic process" evidence=ISO] [GO:0006625 "protein
targeting to peroxisome" evidence=ISO] [GO:0005053 "peroxisome
matrix targeting signal-2 binding" evidence=IEA;ISO] [GO:0016560
"protein import into peroxisome matrix, docking" evidence=IEA;ISO]
[GO:0005829 "cytosol" evidence=IEA;ISO] [GO:0005777 "peroxisome"
evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0016558
"protein import into peroxisome matrix" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR025651 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0000686 GO:GO:0005829 GO:GO:0005777
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
EMBL:AACQ01000106 EMBL:AACQ01000112 GO:GO:0016560 KO:K13341
GO:GO:0005053 PANTHER:PTHR22850:SF4 eggNOG:NOG320380
RefSeq:XP_714022.1 RefSeq:XP_714298.1 ProteinModelPortal:Q59WW3
STRING:Q59WW3 GeneID:3644027 GeneID:3644322 KEGG:cal:CaO19.7735
KEGG:cal:CaO19.89 Uniprot:Q59WW3
Length = 380
Score = 149 (57.5 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 43/161 (26%), Positives = 74/161 (45%)
Query: 135 SHNVS-KPSHTVDAHTAEVNCL---SFNPYSEYILATGSADKTVALWDLRNLK-LKLHSF 189
SH + +P NC+ F+P+S ++ + + V +WD+R+ L+L F
Sbjct: 166 SHQPAHQPQQQQQQQVNTANCIYSAQFSPHSPSMVVSCNGGSQVQVWDVRSPNPLQL-KF 224
Query: 190 ESHKD-EIFQVQWSPHNETILASSGTDRRLHVWDL---SKIGEEQSTEDAEDGP---PEL 242
+H E V W+ + T++AS GTD+ + +WDL +KI + + G P
Sbjct: 225 TAHGGLEALSVDWNKYKSTVIASGGTDKSVRIWDLRSITKIDQPIAQSPMASGHIRGPTP 284
Query: 243 LFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTD 283
L GH + W+P+ P + S S D + + D +D
Sbjct: 285 LNELIGHEFAVRRVQWSPHNPKELMSTSYDMTARIWNDESD 325
>UNIPROTKB|Q59WW3 [details] [associations]
symbol:PEX7 "Potential intraperoxisomal protein receptor
Pex7" species:237561 "Candida albicans SC5314" [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=ISO]
[GO:0005777 "peroxisome" evidence=ISO] [GO:0005829 "cytosol"
evidence=ISO] [GO:0016560 "protein import into peroxisome matrix,
docking" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR025651 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0000686 GO:GO:0005829
GO:GO:0005777 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
EMBL:AACQ01000106 EMBL:AACQ01000112 GO:GO:0016560 KO:K13341
GO:GO:0005053 PANTHER:PTHR22850:SF4 eggNOG:NOG320380
RefSeq:XP_714022.1 RefSeq:XP_714298.1 ProteinModelPortal:Q59WW3
STRING:Q59WW3 GeneID:3644027 GeneID:3644322 KEGG:cal:CaO19.7735
KEGG:cal:CaO19.89 Uniprot:Q59WW3
Length = 380
Score = 149 (57.5 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 43/161 (26%), Positives = 74/161 (45%)
Query: 135 SHNVS-KPSHTVDAHTAEVNCL---SFNPYSEYILATGSADKTVALWDLRNLK-LKLHSF 189
SH + +P NC+ F+P+S ++ + + V +WD+R+ L+L F
Sbjct: 166 SHQPAHQPQQQQQQQVNTANCIYSAQFSPHSPSMVVSCNGGSQVQVWDVRSPNPLQL-KF 224
Query: 190 ESHKD-EIFQVQWSPHNETILASSGTDRRLHVWDL---SKIGEEQSTEDAEDGP---PEL 242
+H E V W+ + T++AS GTD+ + +WDL +KI + + G P
Sbjct: 225 TAHGGLEALSVDWNKYKSTVIASGGTDKSVRIWDLRSITKIDQPIAQSPMASGHIRGPTP 284
Query: 243 LFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTD 283
L GH + W+P+ P + S S D + + D +D
Sbjct: 285 LNELIGHEFAVRRVQWSPHNPKELMSTSYDMTARIWNDESD 325
>FB|FBgn0263933 [details] [associations]
symbol:ebi "ebi" species:7227 "Drosophila melanogaster"
[GO:0042058 "regulation of epidermal growth factor receptor
signaling pathway" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005525 "GTP binding" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0051726 "regulation of cell
cycle" evidence=IMP] [GO:0007173 "epidermal growth factor receptor
signaling pathway" evidence=TAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0042676 "compound eye cone cell fate
commitment" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0017053 "transcriptional repressor complex"
evidence=IGI;IPI] [GO:0042461 "photoreceptor cell development"
evidence=IMP] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0031065 "positive regulation of histone deacetylation"
evidence=IDA] [GO:0070491 "repressing transcription factor binding"
evidence=IPI] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=IPI] [GO:0035220 "wing disc
development" evidence=IGI;IMP] [GO:0045747 "positive regulation of
Notch signaling pathway" evidence=IGI;IDA] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0045572 "positive regulation of
imaginal disc growth" evidence=IGI;IMP] [GO:0022416 "chaeta
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005525 GO:GO:0017053 GO:GO:0007173 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0007601 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030162 GO:GO:0007219 GO:GO:0045747
GO:GO:0003682 GO:GO:0000122 GO:GO:0022416 GO:GO:0035220
GO:GO:0007049 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045572
GO:GO:0005700 GO:GO:0042461 GO:GO:0042058 GO:GO:0031065
GO:GO:0042676 EMBL:AF146345 EMBL:AY061326 RefSeq:NP_477329.1
UniGene:Dm.3639 ProteinModelPortal:Q95RJ9 SMR:Q95RJ9 IntAct:Q95RJ9
MINT:MINT-6540401 STRING:Q95RJ9 PaxDb:Q95RJ9
EnsemblMetazoa:FBtr0078055 GeneID:33212 KEGG:dme:Dmel_CG4063
CTD:33212 FlyBase:FBgn0263933 GeneTree:ENSGT00690000102024
InParanoid:Q95RJ9 KO:K04508 OMA:NRDRCCH OrthoDB:EOG4SF7NC
PhylomeDB:Q95RJ9 GenomeRNAi:33212 NextBio:782461 Bgee:Q95RJ9
GermOnline:CG4063 Uniprot:Q95RJ9
Length = 700
Score = 153 (58.9 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 41/138 (29%), Positives = 67/138 (48%)
Query: 97 TQNFPFPLSRQ-DVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCL 155
TQ F F + DV W F S + DQ++ + V++P T HT EVN +
Sbjct: 486 TQQFAFHSAPALDVDWQT--NQAFASCSTDQRIHVCRL---GVNEPIKTFKGHTNEVNAI 540
Query: 156 SFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSP--------HNET 207
+ P + +LA+ S D T+ +W + N H ++H EI+ ++WSP +
Sbjct: 541 KWCPQGQ-LLASCSDDMTLKIWSM-NRDRCCHDLQAHSKEIYTIKWSPTGPGTNNPNTNL 598
Query: 208 ILASSGTDRRLHVWDLSK 225
ILAS+ D + +WD+ +
Sbjct: 599 ILASASFDSTVRLWDVER 616
Score = 146 (56.5 bits), Expect = 8.2e-07, P = 8.2e-07
Identities = 36/112 (32%), Positives = 56/112 (50%)
Query: 118 LFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSF--------NPYSEYILATGS 169
L S +DD L IW S N + H + AH+ E+ + + NP + ILA+ S
Sbjct: 548 LLASCSDDMTLKIW---SMNRDRCCHDLQAHSKEIYTIKWSPTGPGTNNPNTNLILASAS 604
Query: 170 ADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVW 221
D TV LWD+ +H+ H + ++ V +SP + LAS D+ +H+W
Sbjct: 605 FDSTVRLWDVERGSC-IHTLTKHTEPVYSVAFSPDGKH-LASGSFDKCVHIW 654
Score = 121 (47.7 bits), Expect = 0.00045, P = 0.00045
Identities = 33/108 (30%), Positives = 57/108 (52%)
Query: 118 LFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALW 177
+ S + D + +WD + HT+ HT V ++F+P ++ LA+GS DK V +W
Sbjct: 599 ILASASFDSTVRLWDVERGSCI---HTLTKHTEPVYSVAFSPDGKH-LASGSFDKCVHIW 654
Query: 178 DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 225
+ +L +HS++ IF+V W+ T + +S +D + V DL K
Sbjct: 655 STQTGQL-VHSYKG-TGGIFEVCWNSKG-TKVGASASDGSVFVLDLRK 699
>UNIPROTKB|F1RF38 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0031117 "positive regulation of microtubule depolymerization"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA] [GO:0007026
"negative regulation of microtubule depolymerization" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0008352
"katanin complex" evidence=IEA] [GO:0008017 "microtubule binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005886 GO:GO:0005813
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
GO:GO:0008352 PANTHER:PTHR19845 OMA:NAISRTP GO:GO:0031117
EMBL:CU467555 Ensembl:ENSSSCT00000003113 Uniprot:F1RF38
Length = 521
Score = 151 (58.2 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 40/120 (33%), Positives = 61/120 (50%)
Query: 148 HTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNET 207
H+ V CL F+P ++ LA+ + D TV LWDL K+ + F H + V++ P NE
Sbjct: 3 HSQAVRCLRFSPDGKW-LASAADDHTVKLWDLTAGKM-MSEFPGHTGPVNVVEFHP-NEY 59
Query: 208 ILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPE-LLF------IHGGHTAKISDFSWNP 260
+LAS +DR + WDL K + S + E GP +LF ++ G + + W P
Sbjct: 60 LLASGSSDRTIRFWDLEKF-QVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWEP 118
Score = 133 (51.9 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 29/102 (28%), Positives = 51/102 (50%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
S ADD + +WD + K HT VN + F+P +EY+LA+GS+D+T+ WDL
Sbjct: 21 SAADDHTVKLWDLTA---GKMMSEFPGHTGPVNVVEFHP-NEYLLASGSSDRTIRFWDLE 76
Query: 181 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWD 222
++ + E + V ++P + + R++ W+
Sbjct: 77 KFQV-VSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWE 117
>FB|FBgn0020618 [details] [associations]
symbol:Rack1 "Receptor of activated protein kinase C 1"
species:7227 "Drosophila melanogaster" [GO:0005080 "protein kinase
C binding" evidence=NAS] [GO:0048477 "oogenesis" evidence=IMP]
[GO:0035220 "wing disc development" evidence=IMP] [GO:0042335
"cuticle development" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007626 "locomotory behavior" evidence=IMP]
[GO:0018991 "oviposition" evidence=IMP] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0046716 "muscle cell homeostasis"
evidence=IGI] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0016243 "regulation of autophagic vacuole size"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0018991 GO:GO:0005875
EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048477 GO:GO:0007626 GO:GO:0042335 GO:GO:0035220
GO:GO:0046716 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013 KO:K14753
OMA:IRVWQVM GeneTree:ENSGT00700000104461 EMBL:U96491 EMBL:AY071661
RefSeq:NP_477269.1 UniGene:Dm.6830 ProteinModelPortal:O18640
SMR:O18640 DIP:DIP-17169N IntAct:O18640 MINT:MINT-795417
STRING:O18640 PaxDb:O18640 PRIDE:O18640 EnsemblMetazoa:FBtr0079565
EnsemblMetazoa:FBtr0331238 GeneID:34070 KEGG:dme:Dmel_CG7111
CTD:34070 FlyBase:FBgn0020618 InParanoid:O18640 OrthoDB:EOG4X3FGX
PhylomeDB:O18640 ChiTaRS:GNB2L1 GenomeRNAi:34070 NextBio:786727
Bgee:O18640 GermOnline:CG7111 Uniprot:O18640
Length = 318
Score = 147 (56.8 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 46/166 (27%), Positives = 79/166 (47%)
Query: 125 DQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWD-LRNLK 183
DQ L +WD + K + + HT +V ++F+ + I++ GS DKT+ LW+ L K
Sbjct: 85 DQTLRLWDLAA---GKTTRRFEGHTKDVLSVAFSADNRQIVS-GSRDKTIKLWNTLAECK 140
Query: 184 LKLHSFESHKDEIFQVQWSP-HNETILASSGTDRRLHVWDLS--KI-----GEEQSTEDA 235
+ + H D + V++SP H+ I+ S G DR + VW+L+ K+ G
Sbjct: 141 FTIQE-DGHTDWVSCVRFSPNHSNPIIVSCGWDRTVKVWNLANCKLKNNHHGHNGYLNTV 199
Query: 236 EDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDS 281
P L GG +K W+ N+ + ++ ++I+ C S
Sbjct: 200 TVSPDGSLCTSGGKDSKA--LLWDLNDGKNLYTLEHNDIINALCFS 243
>MGI|MGI:1919241 [details] [associations]
symbol:Ercc8 "excision repaiross-complementing rodent repair
deficiency, complementation group 8" species:10090 "Mus musculus"
[GO:0000109 "nucleotide-excision repair complex" evidence=ISO]
[GO:0000209 "protein polyubiquitination" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006283 "transcription-coupled nucleotide-excision repair"
evidence=ISO] [GO:0006289 "nucleotide-excision repair"
evidence=ISO] [GO:0006974 "response to DNA damage stimulus"
evidence=ISO] [GO:0006979 "response to oxidative stress"
evidence=ISO] [GO:0009411 "response to UV" evidence=ISO;IMP]
[GO:0010165 "response to X-ray" evidence=IMP] [GO:0016363 "nuclear
matrix" evidence=ISO] [GO:0031464 "Cul4A-RING ubiquitin ligase
complex" evidence=ISO] [GO:0032403 "protein complex binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0043234 "protein complex"
evidence=ISO] [GO:0045739 "positive regulation of DNA repair"
evidence=ISO] [GO:0051865 "protein autoubiquitination"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 MGI:MGI:1919241 GO:GO:0009411
GO:GO:0006979 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004842 GO:GO:0016363
GO:GO:0000209 GO:GO:0010165 GO:GO:0045739 GO:GO:0051865
GO:GO:0006283 HOGENOM:HOG000248233 KO:K10570 GO:GO:0031464
GO:GO:0000109 CTD:1161 GeneTree:ENSGT00390000009065
HOVERGEN:HBG005409 OMA:TMLRGHY OrthoDB:EOG4SN1NR EMBL:AJ427222
EMBL:AK010576 EMBL:AK157175 EMBL:BC037200 IPI:IPI00311474
RefSeq:NP_082318.2 UniGene:Mm.212208 ProteinModelPortal:Q8CFD5
SMR:Q8CFD5 STRING:Q8CFD5 PhosphoSite:Q8CFD5 PRIDE:Q8CFD5
Ensembl:ENSMUST00000054835 GeneID:71991 KEGG:mmu:71991
UCSC:uc007rux.1 InParanoid:Q8CFD5 NextBio:335154 Bgee:Q8CFD5
Genevestigator:Q8CFD5 GermOnline:ENSMUSG00000021694 Uniprot:Q8CFD5
Length = 397
Score = 149 (57.5 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 46/187 (24%), Positives = 86/187 (45%)
Query: 105 SRQDVAWHLLHESLFGSVADDQKLMIWDT---RSHNVSKPSHTVDAHTAEVNCLSFNPYS 161
S + V W+ +F S + D+ L +WDT ++ +V TV +H +S
Sbjct: 101 SVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQAADVFNFEETVYSHH-----MSPAATK 155
Query: 162 EYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVW 221
++A G+ V L DL++ H + H+ EI V WSP ++ ILA++ D R+ +W
Sbjct: 156 HCLVAVGTRGPKVQLCDLKSGSCS-HILQGHRQEILAVSWSPRHDYILATASADSRVKLW 214
Query: 222 DLSKIGEEQSTEDAEDGPPELLF--IHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYC 279
D+ + T D +G + H K++ + ++ + ++ DN M+ +
Sbjct: 215 DVRRASGCLLTLDQHNGKKSQAAESANTAHNGKVNGLCFT-SDGLHLLTIGTDNRMRLWN 273
Query: 280 DSTDSDT 286
S+ +T
Sbjct: 274 SSSGDNT 280
>POMBASE|SPCC5E4.03c [details] [associations]
symbol:taf5 "SAGA complex subunit/TATA-binding protein
associated factor/transcription factor TFIID complex subunit Taf5"
species:4896 "Schizosaccharomyces pombe" [GO:0000124 "SAGA complex"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005669 "transcription
factor TFIID complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IC] [GO:0016573 "histone
acetylation" evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 PomBase:SPCC5E4.03c
GO:GO:0005829 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329672
GenomeReviews:CU329672_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016573 GO:GO:0006338 GO:GO:0000124
InterPro:IPR013720 Pfam:PF08513 GO:GO:0006367 GO:GO:0005669
KO:K03130 OMA:ERQNNQI HOGENOM:HOG000212424 EMBL:AB001372 PIR:T41454
RefSeq:NP_587902.1 ProteinModelPortal:O13282 IntAct:O13282
STRING:O13282 PRIDE:O13282 EnsemblFungi:SPCC5E4.03c.1
GeneID:2539353 KEGG:spo:SPCC5E4.03c OrthoDB:EOG4S1XG9
NextBio:20800518 Uniprot:O13282
Length = 643
Score = 152 (58.6 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 34/106 (32%), Positives = 58/106 (54%)
Query: 119 FGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWD 178
F + + DQ +W H P H ++V+C++F+P S Y+L TGS+DKT LWD
Sbjct: 436 FATASHDQTAQLWSC-DHIY--PLRVFAGHLSDVDCVTFHPNSAYVL-TGSSDKTCRLWD 491
Query: 179 L-RNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDL 223
+ R +++ F H + V +P T +AS+ ++ +H+WD+
Sbjct: 492 VHRGHSVRV--FNGHTQPVTAVAIAPDGHT-MASADSEGLIHLWDI 534
>UNIPROTKB|B5X9P2 [details] [associations]
symbol:ciao1a "Probable cytosolic iron-sulfur protein
assembly protein ciao1-A" species:8030 "Salmo salar" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] [GO:0097361 "CIA
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016226 GO:GO:0097361 EMBL:BT047761
ProteinModelPortal:B5X9P2 Uniprot:B5X9P2
Length = 330
Score = 147 (56.8 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 45/176 (25%), Positives = 78/176 (44%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATG 168
VAW+ +L S D+ + IW + + D H V ++++P Y LA+
Sbjct: 22 VAWNP-KGTLLASCGGDRAIRIWGREGDSWECKTVLQDGHQRAVRKVAWSPCGNY-LASA 79
Query: 169 SADKTVALWDLRNLKLK-LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIG 227
S D T +W +N + L E H++E+ V W+P LA+ D+ + +W++
Sbjct: 80 SFDATTCIWKKKNDDFECLTVLEGHENEVKCVAWAPSGNQ-LATCSRDKSVWIWEV---- 134
Query: 228 EEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTD 283
D ED E + + HT + W+P + ++ S S DN + Y + D
Sbjct: 135 ------DEED-EYECVSVVNSHTQDVKHVVWHPTQE-LLASCSYDNNVCVYKEEDD 182
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 148 (57.2 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 43/157 (27%), Positives = 81/157 (51%)
Query: 84 ILNISILFFEIIFTQNFPFPLSRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSH 143
I N+S L E T + L D AW +S+ + +DD+ L I++ + ++K
Sbjct: 105 IWNMSDLSCERTLTGH---KLGVNDFAWSADSKSIV-TASDDKTLKIYEVPTVKMAK--- 157
Query: 144 TVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSP 203
T+ HT V C +FNP S +++ GS D++V +WD+R + + + +H D + V ++
Sbjct: 158 TLKGHTNYVFCCNFNPQSSLVVS-GSFDESVRIWDVRT-GMCVKTLPAHSDPVSAVSFN- 214
Query: 204 HNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPP 240
+ +++ S D + +WD + G+ T ++ PP
Sbjct: 215 RDGSLITSGSYDGLVRIWDTAN-GQCVKTLVDDENPP 250
Score = 127 (49.8 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 35/109 (32%), Positives = 55/109 (50%)
Query: 117 SLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVAL 176
SL S + D+ + IWD R+ K T+ AH+ V+ +SFN ++ +GS D V +
Sbjct: 176 SLVVSGSFDESVRIWDVRTGMCVK---TLPAHSDPVSAVSFNRDGS-LITSGSYDGLVRI 231
Query: 177 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 225
WD N + + + V++SP+ + IL SS D L +WD K
Sbjct: 232 WDTANGQCVKTLVDDENPPVAFVKFSPNGKYIL-SSNLDNTLKLWDFGK 279
Score = 121 (47.7 bits), Expect = 0.00017, P = 0.00017
Identities = 23/83 (27%), Positives = 49/83 (59%)
Query: 144 TVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSP 203
T++ HT ++ + F+P ++ L T SADKTV +W++ +L + + HK + WS
Sbjct: 74 TIEGHTKSISAVKFSPCGKF-LGTSSADKTVKIWNMSDLSCE-RTLTGHKLGVNDFAWSA 131
Query: 204 HNETILASSGTDRRLHVWDLSKI 226
+++I+ +S D+ L ++++ +
Sbjct: 132 DSKSIVTASD-DKTLKIYEVPTV 153
>UNIPROTKB|B4KTK4 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7230 "Drosophila mojavensis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH933808 OrthoDB:EOG45DV4X RefSeq:XP_002005652.1
ProteinModelPortal:B4KTK4 EnsemblMetazoa:FBtr0169681 GeneID:6579773
KEGG:dmo:Dmoj_GI18956 FlyBase:FBgn0141695 InParanoid:B4KTK4
Uniprot:B4KTK4
Length = 331
Score = 147 (56.8 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 42/177 (23%), Positives = 79/177 (44%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATG 168
VAWH S F S +D+ + IW + + + D H + + ++P EY LA+
Sbjct: 20 VAWHPKGNS-FASCGEDKAIRIWSLSGNTWTTKTILSDGHKRTIREVRWSPCGEY-LASA 77
Query: 169 SADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGE 228
S D T A+W L E H++E+ V WS + +LA+ D+ + +W+++ G+
Sbjct: 78 SFDATTAIWSKHECTATL---EGHENEVKSVSWS-RSGGLLATCSRDKSVWIWEVA--GD 131
Query: 229 EQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSD 285
++ E + H+ + W+P + + + ++ I + DSD
Sbjct: 132 DEF---------ECAAVLNAHSQDVKRVVWHPTKEILASASYDNTIKMYAESALDSD 179
>TAIR|locus:2057381 [details] [associations]
symbol:emb1345 "AT2G26060" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0009793 "embryo development
ending in seed dormancy" evidence=NAS] [GO:0000394 "RNA splicing,
via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0009086 "methionine biosynthetic process" evidence=RCA]
[GO:0010048 "vernalization response" evidence=RCA] [GO:0048573
"photoperiodism, flowering" evidence=RCA] [GO:0051604 "protein
maturation" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AC004747 HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:AY093154
EMBL:AY085277 EMBL:BT003394 IPI:IPI00536484 PIR:T02617
RefSeq:NP_565615.1 UniGene:At.38940 ProteinModelPortal:O80990
SMR:O80990 PaxDb:O80990 PRIDE:O80990 EnsemblPlants:AT2G26060.1
GeneID:817147 KEGG:ath:AT2G26060 TAIR:At2g26060 InParanoid:O80990
PhylomeDB:O80990 ProtClustDB:CLSN2917143 ArrayExpress:O80990
Genevestigator:O80990 Uniprot:O80990
Length = 352
Score = 141 (54.7 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 47/186 (25%), Positives = 86/186 (46%)
Query: 118 LFGSVADDQKLMIWDTRSHNVSKPSHTV--DAHTAEVNCLSFNPYSEYILATGSADKTVA 175
+ S + D + IW+ S + S TV + HT V +++P S +LAT S D T
Sbjct: 41 ILASCSGDNTVRIWEQSSLSRSWTCKTVLEETHTRTVRSCAWSP-SGQLLATASFDGTTG 99
Query: 176 LWDLRNLKLK-LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTED 234
+W + + + + E H++E+ V W+ + LA+ D+ + +W++ + G E
Sbjct: 100 IWKNYGSEFECISTLEGHENEVKSVSWNASG-SCLATCSRDKSVWIWEVLE-GNEY---- 153
Query: 235 AEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSI 294
+ + GHT + W+P V+ S S DN ++ + S D D + + ++
Sbjct: 154 ------DCAAVLTGHTQDVKMVQWHPTMD-VLFSCSYDNTIKVWW-SEDDDGEYQCVQTL 205
Query: 295 -RSNGG 299
SN G
Sbjct: 206 GESNNG 211
Score = 47 (21.6 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 15/47 (31%), Positives = 26/47 (55%)
Query: 388 RHKSVSDPSYHLISGQVARKFFENSKLPVTELRKIWYP-DSNKILST 433
+H SV PSY+L+ + K EN V ++ W P + N++L++
Sbjct: 297 KHDSVDGPSYNLLLKK--NKAHEND---VNSVQ--WSPGEGNRLLAS 336
>UNIPROTKB|F1PUU2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001826
"inner cell mass cell differentiation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007219 GeneTree:ENSGT00690000102167
PRINTS:PR00319 GO:GO:0001826 EMBL:AAEX03006625
Ensembl:ENSCAFT00000029052 Uniprot:F1PUU2
Length = 436
Score = 149 (57.5 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 38/126 (30%), Positives = 66/126 (52%)
Query: 103 PLSRQDVAWHLLHESLFG-------SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCL 155
PL+R L+++ LF S + D+ + +WD R+ K ++ H A V +
Sbjct: 315 PLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRT---GKYLASLRGHVAAVYQI 371
Query: 156 SFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTD 215
+++ S +L +GS+D T+ +WD++ KL H DE++ V WSP + + AS G D
Sbjct: 372 AWSADSR-LLVSGSSDSTLKVWDVKAQKLAA-DLPGHADEVYAVDWSPDGQRV-ASGGKD 428
Query: 216 RRLHVW 221
+ L +W
Sbjct: 429 KCLRIW 434
Score = 145 (56.1 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 36/103 (34%), Positives = 53/103 (51%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
S +DD L +W KP + H A +N + F+P S I+A+ S DK++ LWD R
Sbjct: 297 SGSDDFTLFMWSPAEDK--KPLARMTGHQALINQVLFSPDSR-IIASASFDKSIKLWDGR 353
Query: 181 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDL 223
K L S H ++Q+ WS + +L S +D L VWD+
Sbjct: 354 TGKY-LASLRGHVAAVYQIAWSADSR-LLVSGSSDSTLKVWDV 394
Score = 127 (49.8 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 35/127 (27%), Positives = 64/127 (50%)
Query: 134 RSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHK 193
R V++ + +++ H+ V ++F+P +Y LA+GS D TV WDL + + + + H+
Sbjct: 50 RVRAVTRCTSSLEGHSEAVISVAFSPTGKY-LASGSGDTTVRFWDL-STETPHFTCQGHR 107
Query: 194 DEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKI 253
+ + WSP +T LAS + ++ +WD S G++ + GH+ I
Sbjct: 108 HWVLSISWSPDGKT-LASGCKNGQILLWDPST-GKQVGR------------VLAGHSKWI 153
Query: 254 SDFSWNP 260
+ SW P
Sbjct: 154 TGLSWEP 160
>TAIR|locus:2136133 [details] [associations]
symbol:SPA2 "SPA1-related 2" species:3702 "Arabidopsis
thaliana" [GO:0004672 "protein kinase activity" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=ISS]
[GO:0006281 "DNA repair" evidence=RCA] [GO:0010100 "negative
regulation of photomorphogenesis" evidence=RCA] [GO:0048608
"reproductive structure development" evidence=RCA]
InterPro:IPR017986 InterPro:IPR000719 InterPro:IPR001680
InterPro:IPR011009 InterPro:IPR015943 Pfam:PF00069 Pfam:PF00400
PROSITE:PS50011 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005524 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
EMBL:AL161531 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 SUPFAM:SSF56112 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004672 GO:GO:0009585
GO:GO:0080008 EMBL:AF080120 EMBL:AL049876 HOGENOM:HOG000029775
EMBL:AK229182 IPI:IPI00538672 PIR:T01922 PIR:T01923 PIR:T08190
RefSeq:NP_192849.4 UniGene:At.46392 ProteinModelPortal:Q9T014
SMR:Q9T014 IntAct:Q9T014 STRING:Q9T014 PRIDE:Q9T014
EnsemblPlants:AT4G11110.1 GeneID:826712 KEGG:ath:AT4G11110
GeneFarm:3132 TAIR:At4g11110 InParanoid:Q0WP97 OMA:FGGHTNE
PhylomeDB:Q9T014 ProtClustDB:CLSN2920287 Genevestigator:Q9T014
Uniprot:Q9T014
Length = 1036
Score = 154 (59.3 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 56/226 (24%), Positives = 97/226 (42%)
Query: 75 NNYVANISCILNIS--ILFFEIIFTQNFPFPLSRQDVAWHL-LHESL---FGSVADDQKL 128
NNY+ N + + +++ Q + + AW + E+ S +DD +
Sbjct: 781 NNYIRNYLASSDYDGIVKLWDVTTGQAISHFIEHEKRAWSVDFSEACPTKLASGSDDCSV 840
Query: 129 MIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHS 188
+W+ N + A V C+ F+P S ++LA GS+D +DLRNL+
Sbjct: 841 KLWNINERNCLGTIRNI----ANVCCVQFSPQSSHLLAFGSSDFRTYCYDLRNLRTPWCI 896
Query: 189 FESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGG 248
H + ++ NET++ +S TD L +WDL K + +A L F GG
Sbjct: 897 LSGHNKAVSYAKFLD-NETLVTAS-TDNTLKLWDLKKTTHGGLSTNA----CSLTF--GG 948
Query: 249 HTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSI 294
HT + + + ++ ++ C SE N + Y S + + SI
Sbjct: 949 HTNEKNFVGLSTSDGYIACG-SETNEVYAYHRSLPMPITSYKFGSI 993
>RGD|621591 [details] [associations]
symbol:Coro7 "coronin 7" species:10116 "Rattus norvegicus"
[GO:0000139 "Golgi membrane" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA;ISO;ISS;IBA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IRD]
[GO:0016021 "integral to membrane" evidence=ISO;ISS] [GO:0016023
"cytoplasmic membrane-bounded vesicle" evidence=IEA] [GO:0030036
"actin cytoskeleton organization" evidence=IRD] [GO:0051015 "actin
filament binding" evidence=IRD] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:621591 GO:GO:0016021
GO:GO:0005829 GO:GO:0005794 GO:GO:0000139 Gene3D:2.130.10.10
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016023
InterPro:IPR015505 InterPro:IPR015049 PANTHER:PTHR10856
Pfam:PF08954 HOGENOM:HOG000006535 HOVERGEN:HBG051080 EMBL:Y15054
IPI:IPI00213071 UniGene:Rn.13808 ProteinModelPortal:O35828
PRIDE:O35828 UCSC:RGD:621591 ArrayExpress:O35828
Genevestigator:O35828 GermOnline:ENSRNOG00000004146 Uniprot:O35828
Length = 443
Score = 149 (57.5 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 39/139 (28%), Positives = 66/139 (47%)
Query: 108 DVAWHLLHESLFGSVADDQKLMIWDTRS---HNV-SKPSHTVDAHTAEVNCLSFNPYSEY 163
D+ W +D ++ +W N+ + P + HT ++ L F+P +
Sbjct: 68 DLVWDPFDPHRLAVAGEDARIRLWRVPPGGLKNILTTPETVLTGHTEKIYSLRFHPLAAD 127
Query: 164 ILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDL 223
+LA+ S D T+ +WDL+ +L + H+D+IF + WSP + LA+ D R+ V+D
Sbjct: 128 VLASSSYDLTIRIWDLQARTEQLR-LQGHQDQIFSLAWSPDGKQ-LATVCKDGRVRVYD- 184
Query: 224 SKIGEEQSTEDAEDGP-PE 241
S +DGP PE
Sbjct: 185 ----PRSSPLPLQDGPGPE 199
>UNIPROTKB|H3BU76 [details] [associations]
symbol:CORO1A "Coronin" species:9606 "Homo sapiens"
[GO:0005884 "actin filament" evidence=IEA] [GO:0001772
"immunological synapse" evidence=IEA] [GO:0006816 "calcium ion
transport" evidence=IEA] [GO:0007015 "actin filament organization"
evidence=IEA] [GO:0008360 "regulation of cell shape" evidence=IEA]
[GO:0030335 "positive regulation of cell migration" evidence=IEA]
[GO:0030595 "leukocyte chemotaxis" evidence=IEA] [GO:0030833
"regulation of actin filament polymerization" evidence=IEA]
[GO:0031252 "cell leading edge" evidence=IEA] [GO:0032796 "uropod
organization" evidence=IEA] [GO:0034097 "response to cytokine
stimulus" evidence=IEA] [GO:0042102 "positive regulation of T cell
proliferation" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0043029 "T cell homeostasis"
evidence=IEA] [GO:0048873 "homeostasis of number of cells within a
tissue" evidence=IEA] [GO:0051015 "actin filament binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0031252 GO:GO:0007015 Gene3D:2.130.10.10
PROSITE:PS00678 GO:GO:0008360 InterPro:IPR019775 GO:GO:0015629
GO:GO:0034097 GO:GO:0006816 GO:GO:0030335 GO:GO:0048873
GO:GO:0042102 GO:GO:0043029 GO:GO:0030833 GO:GO:0001772
GO:GO:0030595 GO:GO:0032796 InterPro:IPR015505 InterPro:IPR015048
PANTHER:PTHR10856 Pfam:PF08953 HGNC:HGNC:2252 EMBL:AC012645
Ensembl:ENST00000569970 Bgee:H3BU76 Uniprot:H3BU76
Length = 165
Score = 127 (49.8 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 30/96 (31%), Positives = 53/96 (55%)
Query: 134 RSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRN--LKLKLH---- 187
++ V K + TV HTA V +++ P+++ ++A+GS D TV +W++ + L L L
Sbjct: 66 KTGRVDKNAPTVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLMLPLREPVV 125
Query: 188 SFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDL 223
+ E H + V W + +L S+G D + VWD+
Sbjct: 126 TLEGHTKRVGIVAWHTTAQNVLLSAGCDNVIMVWDV 161
>UNIPROTKB|E1BT84 [details] [associations]
symbol:WDR33 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00540000070914 OMA:TVMEVKL EMBL:AADN02024425
IPI:IPI00586005 ProteinModelPortal:E1BT84
Ensembl:ENSGALT00000003177 Uniprot:E1BT84
Length = 1323
Score = 155 (59.6 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 51/166 (30%), Positives = 74/166 (44%)
Query: 109 VAWHLLHESLF-GSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILAT 167
V WH + GS Q + WD ++ + T+ AH V + N ++L T
Sbjct: 250 VDWHPTKGLVVSGSKDSQQPIKFWDPKT---GQSLATLHAHKNTVMEVKLNLNGNWLL-T 305
Query: 168 GSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIG 227
S D L+D+RNLK +L F HK E V W P +E + AS G+D L W +G
Sbjct: 306 ASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWH---VG 362
Query: 228 EEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
E+ E G E+ H I +W+P ++CS S D+
Sbjct: 363 VEK-----EVGGMEM-----AHEGMIWSLAWHPLGH-ILCSGSNDH 397
>TAIR|locus:2158232 [details] [associations]
symbol:HOS15 "high expression of osmotically responsive
genes 15" species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0009409 "response to cold" evidence=IMP]
[GO:0016575 "histone deacetylation" evidence=IMP] [GO:0000956
"nuclear-transcribed mRNA catabolic process" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0016571 "histone methylation" evidence=RCA]
[GO:0016572 "histone phosphorylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005634
EMBL:CP002688 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0009409 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 EMBL:AB007645 GO:GO:0016575
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000220902 OMA:LANNHAD
EMBL:AY057698 EMBL:AY143932 IPI:IPI00531489 RefSeq:NP_201533.1
UniGene:At.6493 ProteinModelPortal:Q9FN19 SMR:Q9FN19 STRING:Q9FN19
PRIDE:Q9FN19 EnsemblPlants:AT5G67320.1 GeneID:836867
KEGG:ath:AT5G67320 TAIR:At5g67320 InParanoid:Q9FN19
PhylomeDB:Q9FN19 ProtClustDB:CLSN2687044 Genevestigator:Q9FN19
Uniprot:Q9FN19
Length = 613
Score = 151 (58.2 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 41/130 (31%), Positives = 63/130 (48%)
Query: 117 SLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSF--------NPYSEYILATG 168
SL S +DD IW+ + S H + HT E+ + + NP + LA+
Sbjct: 461 SLLASCSDDSTAKIWNIKQ---STFVHDLREHTKEIYTIRWSPTGPGTNNPNKQLTLASA 517
Query: 169 SADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGE 228
S D TV LWD K+ L SF H++ ++ + +SP+ E I AS D+ +H+W + K G+
Sbjct: 518 SFDSTVKLWDAELGKM-LCSFNGHREPVYSLAFSPNGEYI-ASGSLDKSIHIWSI-KEGK 574
Query: 229 EQSTEDAEDG 238
T G
Sbjct: 575 IVKTYTGNGG 584
Score = 137 (53.3 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 43/162 (26%), Positives = 74/162 (45%)
Query: 139 SKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQ 198
++P+ T H EVNC+ ++P +LA+ S D T +W+++ +H H EI+
Sbjct: 438 TRPAKTFTGHQGEVNCVKWDPTGS-LLASCSDDSTAKIWNIKQSTF-VHDLREHTKEIYT 495
Query: 199 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 258
++WSP T ++ +++L + S DAE G ++L GH + ++
Sbjct: 496 IRWSP---TGPGTNNPNKQLTLASAS-FDSTVKLWDAELG--KMLCSFNGHREPVYSLAF 549
Query: 259 NPNEPWVICSVSEDNIMQEYCDSTDSDTKTMRLDSIRSNGGI 300
+PN + I S S D + + KT NGGI
Sbjct: 550 SPNGEY-IASGSLDKSIHIWSIKEGKIVKTYT-----GNGGI 585
Score = 123 (48.4 bits), Expect = 0.00023, P = 0.00023
Identities = 34/112 (30%), Positives = 52/112 (46%)
Query: 117 SLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVAL 176
+L + + D + IW +S T+ H + L +N +Y+L TGS D+T +
Sbjct: 337 TLLATGSCDGQARIWTLNGELIS----TLSKHKGPIFSLKWNKKGDYLL-TGSVDRTAVV 391
Query: 177 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGE 228
WD++ + K FE H V W N A+S TD ++ L KIGE
Sbjct: 392 WDVKAEEWK-QQFEFHSGPTLDVDW--RNNVSFATSSTDSMIY---LCKIGE 437
>UNIPROTKB|F1LT09 [details] [associations]
symbol:Wdr33 "Protein Wdr33" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1309230 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00540000070914 IPI:IPI00189285 PRIDE:F1LT09
Ensembl:ENSRNOT00000017075 ArrayExpress:F1LT09 Uniprot:F1LT09
Length = 1327
Score = 155 (59.6 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 51/166 (30%), Positives = 74/166 (44%)
Query: 109 VAWHLLHESLF-GSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILAT 167
V WH + GS Q + WD ++ + T+ AH V + N ++L T
Sbjct: 246 VDWHPTKGLVVSGSKDSQQPIKFWDPKT---GQSLATLHAHKNTVMEVKLNLNGNWLL-T 301
Query: 168 GSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIG 227
S D L+D+RNLK +L F HK E V W P +E + AS G+D L W +G
Sbjct: 302 ASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWH---VG 358
Query: 228 EEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
E+ E G E+ H I +W+P ++CS S D+
Sbjct: 359 VEK-----EVGGMEM-----AHEGMIWSLAWHPLGH-ILCSGSNDH 393
>MGI|MGI:1921570 [details] [associations]
symbol:Wdr33 "WD repeat domain 33" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005581
"collagen" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1921570 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0006397
GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391 HSSP:P16649
GeneTree:ENSGT00540000070914 KO:K15542 CTD:55339 OMA:TVMEVKL
ChiTaRS:WDR33 EMBL:AB086191 EMBL:AK031786 EMBL:AK050653
EMBL:AC124393 EMBL:AC131761 EMBL:AC161511 IPI:IPI00170242
RefSeq:NP_083142.2 UniGene:Mm.277705 ProteinModelPortal:Q8K4P0
SMR:Q8K4P0 PhosphoSite:Q8K4P0 PRIDE:Q8K4P0
Ensembl:ENSMUST00000025264 GeneID:74320 KEGG:mmu:74320
UCSC:uc008eis.2 HOGENOM:HOG000148601 HOVERGEN:HBG054623
InParanoid:Q8C7C6 NextBio:340445 Bgee:Q8K4P0 Genevestigator:Q8K4P0
Uniprot:Q8K4P0
Length = 1330
Score = 155 (59.6 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 51/166 (30%), Positives = 74/166 (44%)
Query: 109 VAWHLLHESLF-GSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILAT 167
V WH + GS Q + WD ++ + T+ AH V + N ++L T
Sbjct: 250 VDWHPTKGLVVSGSKDSQQPIKFWDPKT---GQSLATLHAHKNTVMEVKLNLNGNWLL-T 305
Query: 168 GSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIG 227
S D L+D+RNLK +L F HK E V W P +E + AS G+D L W +G
Sbjct: 306 ASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWH---VG 362
Query: 228 EEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
E+ E G E+ H I +W+P ++CS S D+
Sbjct: 363 VEK-----EVGGMEM-----AHEGMIWSLAWHPLGH-ILCSGSNDH 397
>UNIPROTKB|Q5RD06 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9601 "Pongo abelii" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0042384
"cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
HOVERGEN:HBG057502 KO:K16482 CTD:282809 EMBL:CR858112
RefSeq:NP_001125169.1 UniGene:Pab.14153 ProteinModelPortal:Q5RD06
GeneID:100172056 KEGG:pon:100172056 Uniprot:Q5RD06
Length = 451
Score = 149 (57.5 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 42/133 (31%), Positives = 68/133 (51%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
S DQ + +WD R V+K H+ VNC+SF+P Y L T S+D T+ + DL
Sbjct: 203 SAGSDQTVKVWDVR---VNKLLQHYQVHSGGVNCISFHPSDNY-LVTASSDGTLKILDLL 258
Query: 181 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVW-----DLSKIG-EEQSTED 234
+L +++ + H +F V +S E + AS G D ++ +W +L G +++ +
Sbjct: 259 EGRL-IYTLQGHTGPVFTVSFSKGGE-LFASGGADTQVLLWRTNFDELHCKGLNKRNLKR 316
Query: 235 AE-DGPPELLFIH 246
D PP LL I+
Sbjct: 317 LHFDSPPHLLDIY 329
Score = 120 (47.3 bits), Expect = 0.00031, P = 0.00031
Identities = 47/172 (27%), Positives = 79/172 (45%)
Query: 118 LFGSVADDQKLMIWDTRSHN-VSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVAL 176
L S ++D+ + IWDT + V+ S +V N + FNP I + GS D+TV +
Sbjct: 158 LIVSCSEDKTIKIWDTTNKQCVNNFSDSVGF----ANFVDFNPSGTCIASAGS-DQTVKV 212
Query: 177 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAE 236
WD+R KL H ++ H + + + P ++ L ++ +D L + DL + G T
Sbjct: 213 WDVRVNKLLQH-YQVHSGGVNCISFHP-SDNYLVTASSDGTLKILDLLE-GRLIYTLQGH 269
Query: 237 DGPP-ELLFIHGGHT-----AKISDFSWNPNEPWVICS-VSEDNIMQEYCDS 281
GP + F GG A W N + C +++ N+ + + DS
Sbjct: 270 TGPVFTVSFSKGGELFASGGADTQVLLWRTNFDELHCKGLNKRNLKRLHFDS 321
Score = 116 (45.9 bits), Expect = 0.00085, P = 0.00085
Identities = 27/81 (33%), Positives = 43/81 (53%)
Query: 148 HTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNET 207
H A + L +P + LAT S D + LW+ + + + + HKD + VQ+SPH
Sbjct: 17 HKAAITSLDLSPNGKQ-LATASWDTFLMLWNFKP-HARAYRYVGHKDVVTSVQFSPHGN- 73
Query: 208 ILASSGTDRRLHVWDLSKIGE 228
+LAS+ DR + +W K G+
Sbjct: 74 LLASASRDRTVRLWIPDKRGK 94
>UNIPROTKB|E1BCT7 [details] [associations]
symbol:WDR33 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00540000070914 KO:K15542 CTD:55339 OMA:TVMEVKL
EMBL:DAAA02003882 EMBL:DAAA02003883 EMBL:DAAA02003884
IPI:IPI00689135 RefSeq:NP_001193007.1 UniGene:Bt.32571
ProteinModelPortal:E1BCT7 Ensembl:ENSBTAT00000007859 GeneID:541270
KEGG:bta:541270 NextBio:20879105 Uniprot:E1BCT7
Length = 1336
Score = 155 (59.6 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 51/166 (30%), Positives = 74/166 (44%)
Query: 109 VAWHLLHESLF-GSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILAT 167
V WH + GS Q + WD ++ + T+ AH V + N ++L T
Sbjct: 250 VDWHPTKGLVVSGSKDSQQPIKFWDPKT---GQSLATLHAHKNTVMEVKLNLNGNWLL-T 305
Query: 168 GSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIG 227
S D L+D+RNLK +L F HK E V W P +E + AS G+D L W +G
Sbjct: 306 ASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWH---VG 362
Query: 228 EEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
E+ E G E+ H I +W+P ++CS S D+
Sbjct: 363 VEK-----EVGGMEM-----AHEGMIWSLAWHPLGH-ILCSGSNDH 397
>UNIPROTKB|F1PV59 [details] [associations]
symbol:WDR33 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR008160
Pfam:PF01391 GeneTree:ENSGT00540000070914 KO:K15542 OMA:TVMEVKL
EMBL:AAEX03011835 RefSeq:XP_003639747.1 ProteinModelPortal:F1PV59
Ensembl:ENSCAFT00000006945 GeneID:100856093 KEGG:cfa:100856093
Uniprot:F1PV59
Length = 1336
Score = 155 (59.6 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 51/166 (30%), Positives = 74/166 (44%)
Query: 109 VAWHLLHESLF-GSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILAT 167
V WH + GS Q + WD ++ + T+ AH V + N ++L T
Sbjct: 250 VDWHPTKGLVVSGSKDSQQPIKFWDPKT---GQSLATLHAHKNTVMEVKLNLNGNWLL-T 305
Query: 168 GSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIG 227
S D L+D+RNLK +L F HK E V W P +E + AS G+D L W +G
Sbjct: 306 ASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWH---VG 362
Query: 228 EEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
E+ E G E+ H I +W+P ++CS S D+
Sbjct: 363 VEK-----EVGGMEM-----AHEGMIWSLAWHPLGH-ILCSGSNDH 397
>UNIPROTKB|Q9C0J8 [details] [associations]
symbol:WDR33 "pre-mRNA 3' end processing protein WDR33"
species:9606 "Homo sapiens" [GO:0005581 "collagen" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006301 "postreplication repair" evidence=NAS]
[GO:0007283 "spermatogenesis" evidence=NAS] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 GO:GO:0006397 GO:GO:0007283
EMBL:CH471103 GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391
GO:GO:0006301 KO:K15542 EMBL:AC006011 EMBL:AB044749 EMBL:AK002156
EMBL:AK223319 EMBL:BC005401 EMBL:BC013990 EMBL:BC068484
EMBL:AL834365 IPI:IPI00106567 IPI:IPI00385811 IPI:IPI00432450
RefSeq:NP_001006623.1 RefSeq:NP_001006624.1 RefSeq:NP_060853.3
UniGene:Hs.554831 ProteinModelPortal:Q9C0J8 SMR:Q9C0J8
IntAct:Q9C0J8 PhosphoSite:Q9C0J8 DMDM:209572695 PaxDb:Q9C0J8
PRIDE:Q9C0J8 Ensembl:ENST00000322313 Ensembl:ENST00000393006
Ensembl:ENST00000409658 GeneID:55339 KEGG:hsa:55339 UCSC:uc002tpg.2
UCSC:uc002tpi.2 CTD:55339 GeneCards:GC02M128458 HGNC:HGNC:25651
HPA:HPA026897 neXtProt:NX_Q9C0J8 PharmGKB:PA134943440
HOGENOM:HOG000126810 HOVERGEN:HBG062379 InParanoid:Q9C0J8
OMA:TVMEVKL OrthoDB:EOG4V6ZG7 PhylomeDB:Q9C0J8 ChiTaRS:WDR33
GenomeRNAi:55339 NextBio:59651 ArrayExpress:Q9C0J8 Bgee:Q9C0J8
CleanEx:HS_WDR33 Genevestigator:Q9C0J8 GermOnline:ENSG00000136709
Uniprot:Q9C0J8
Length = 1336
Score = 155 (59.6 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 51/166 (30%), Positives = 74/166 (44%)
Query: 109 VAWHLLHESLF-GSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILAT 167
V WH + GS Q + WD ++ + T+ AH V + N ++L T
Sbjct: 250 VDWHPTKGLVVSGSKDSQQPIKFWDPKT---GQSLATLHAHKNTVMEVKLNLNGNWLL-T 305
Query: 168 GSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIG 227
S D L+D+RNLK +L F HK E V W P +E + AS G+D L W +G
Sbjct: 306 ASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWH---VG 362
Query: 228 EEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
E+ E G E+ H I +W+P ++CS S D+
Sbjct: 363 VEK-----EVGGMEM-----AHEGMIWSLAWHPLGH-ILCSGSNDH 397
>UNIPROTKB|Q5BIM8 [details] [associations]
symbol:ERCC8 "DNA excision repair protein ERCC-8"
species:9913 "Bos taurus" [GO:0009411 "response to UV"
evidence=ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0043234 "protein complex" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0051865 "protein autoubiquitination" evidence=ISS] [GO:0045739
"positive regulation of DNA repair" evidence=ISS] [GO:0032403
"protein complex binding" evidence=ISS] [GO:0006979 "response to
oxidative stress" evidence=ISS] [GO:0006289 "nucleotide-excision
repair" evidence=ISS] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=ISS] [GO:0000209 "protein
polyubiquitination" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0031464 "Cul4A-RING ubiquitin ligase complex" evidence=IEA]
[GO:0016363 "nuclear matrix" evidence=IEA] [GO:0010165 "response to
X-ray" evidence=IEA] [GO:0000109 "nucleotide-excision repair
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 GO:GO:0009411 GO:GO:0043234
GO:GO:0006979 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0032403 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004842 GO:GO:0016363
GO:GO:0000209 GO:GO:0010165 GO:GO:0045739 GO:GO:0051865
GO:GO:0006283 HOGENOM:HOG000248233 KO:K10570 GO:GO:0031464
GO:GO:0000109 EMBL:BT021196 IPI:IPI00699947 RefSeq:NP_001103651.1
UniGene:Bt.33395 ProteinModelPortal:Q5BIM8 STRING:Q5BIM8
Ensembl:ENSBTAT00000028792 GeneID:518857 KEGG:bta:518857 CTD:1161
GeneTree:ENSGT00390000009065 HOVERGEN:HBG005409 OMA:TMLRGHY
NextBio:20872751 Uniprot:Q5BIM8
Length = 397
Score = 148 (57.2 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 45/184 (24%), Positives = 82/184 (44%)
Query: 105 SRQDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYI 164
S + V W+ +F S + D+ L +WDT + ++ + + T + +S +
Sbjct: 101 SVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQIADVFNFEE--TVYSHHMSPVATKHCL 158
Query: 165 LATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLS 224
+A G+ V L DL++ H + H+ EI V WSP E ILA++ D R +WD+
Sbjct: 159 VAVGTRGPKVQLCDLKSGSCS-HILQGHRQEILAVSWSPRYEYILATASADSRAKLWDVR 217
Query: 225 KIGEEQSTEDAEDGPPELLF--IHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDST 282
+ T D +G + H K++ + ++ + +V DN M+ + S
Sbjct: 218 RASGCLITLDQHNGKKSQAAESANTAHNGKVNGLCFT-SDGLHLLTVGTDNRMRLWNSSN 276
Query: 283 DSDT 286
+T
Sbjct: 277 GENT 280
>RGD|1311570 [details] [associations]
symbol:Ercc8 "excision repair cross-complementing rodent repair
deficiency, complementation group 8" species:10116 "Rattus
norvegicus" [GO:0000109 "nucleotide-excision repair complex"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0006283
"transcription-coupled nucleotide-excision repair" evidence=IEA]
[GO:0006979 "response to oxidative stress" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0009411 "response
to UV" evidence=IEA] [GO:0010165 "response to X-ray" evidence=IEA]
[GO:0016363 "nuclear matrix" evidence=IEA] [GO:0031464 "Cul4A-RING
ubiquitin ligase complex" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=IEA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045739 "positive regulation of DNA repair" evidence=IEA]
[GO:0051865 "protein autoubiquitination" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311570 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 KO:K10570
EMBL:CH473955 CTD:1161 GeneTree:ENSGT00390000009065 OMA:TMLRGHY
RefSeq:NP_001101120.2 UniGene:Rn.107979 ProteinModelPortal:G3V7B8
Ensembl:ENSRNOT00000013598 GeneID:310071 KEGG:rno:310071
Uniprot:G3V7B8
Length = 397
Score = 148 (57.2 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 47/187 (25%), Positives = 85/187 (45%)
Query: 105 SRQDVAWHLLHESLFGSVADDQKLMIWDT---RSHNVSKPSHTVDAHTAEVNCLSFNPYS 161
S + V W+ +F S + D+ L +WDT ++ +V TV +H +S
Sbjct: 101 SVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQAADVFNFEETVYSHH-----MSPAATK 155
Query: 162 EYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVW 221
++A G+ V L DL++ H + H+ EI V WSP + ILA++ D R+ +W
Sbjct: 156 HCLVAVGTRGPKVQLCDLKSGSCS-HILQGHRQEILAVSWSPRYDYILATASADSRVKLW 214
Query: 222 DLSKIGEEQSTEDAEDGPPELLF--IHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYC 279
D+ + T D +G + H K++ + ++ + +V DN M+ +
Sbjct: 215 DVRRASGCLLTLDQHNGKKSQAVESANTAHNGKVNGLCFT-SDGLHLLTVGTDNRMRLWN 273
Query: 280 DSTDSDT 286
S+ +T
Sbjct: 274 SSSGDNT 280
>FB|FBgn0030011 [details] [associations]
symbol:Gbeta5 "Gbeta5" species:7227 "Drosophila melanogaster"
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS;NAS]
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0007186 "G-protein
coupled receptor signaling pathway" evidence=NAS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 PRINTS:PR00319
GeneTree:ENSGT00550000074331 InterPro:IPR016346 PIRSF:PIRSF002394
KO:K04539 OMA:ATDGLHE EMBL:BT004841 RefSeq:NP_572452.1
UniGene:Dm.11050 SMR:Q9W3J1 IntAct:Q9W3J1 STRING:Q9W3J1
EnsemblMetazoa:FBtr0071189 GeneID:31744 KEGG:dme:Dmel_CG10763
UCSC:CG10763-RA CTD:31744 FlyBase:FBgn0030011 InParanoid:Q9W3J1
OrthoDB:EOG4TTF0F GenomeRNAi:31744 NextBio:775120 Uniprot:Q9W3J1
Length = 358
Score = 147 (56.8 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 36/112 (32%), Positives = 56/112 (50%)
Query: 125 DQKLMIWD-TRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLK 183
D K+ ++ T ++ TV HT+ ++C + P S+ + TGS D T ALWD+ + +
Sbjct: 133 DNKVTVYPITSDEEMAAKKRTVGTHTSYMSCCIY-PNSDQQILTGSGDSTCALWDVESGQ 191
Query: 184 LKLHSFESHKDEIFQVQWSPHNET--ILASSGTDRRLHVWDLSKIGEEQSTE 233
L L SF H ++ + +P NET S DR +WD+ QS E
Sbjct: 192 L-LQSFHGHSGDVMAIDLAP-NETGNTFVSGSCDRMAFIWDMRSGHVVQSFE 241
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 165 (63.1 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 40/111 (36%), Positives = 63/111 (56%)
Query: 125 DQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKL 184
D + IWD + + + T+D H+ V L+F+P + +LA+GS D T+ LWD +L
Sbjct: 771 DDTVKIWDPATGELLQ---TLDGHSGTVESLAFSPDGK-LLASGSYDNTIDLWDSATGEL 826
Query: 185 KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDA 235
L +FE H I+ V ++P + LAS+ D + +WDL+ GE Q T D+
Sbjct: 827 -LQTFEGHPHSIWSVAFAPDGKE-LASASDDSTIKIWDLAT-GELQQTLDS 874
Score = 148 (57.2 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 42/146 (28%), Positives = 69/146 (47%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
S + D + +W++ + + + T H + ++F+P ++ L +GS D T+ LWDL
Sbjct: 977 SSSSDTTIKLWNSTTGELQQ---TFKGHDLWIRAVAFSPDGKH-LVSGSDDNTIKLWDLA 1032
Query: 181 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQST-EDAEDGP 239
+L+ S E H + V +SP ++ LASS D + +WD S GE Q T E G
Sbjct: 1033 TSELQ-QSLEDHSRSVHAVAFSPDDKQ-LASSSLDSTIKLWD-SATGELQRTLEGHSQGV 1089
Query: 240 PELLFIHGGHTAKISDFS-----WNP 260
+ F G + + WNP
Sbjct: 1090 RSVTFSPDGKLLASNSYDGTIKLWNP 1115
Score = 137 (53.3 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 40/141 (28%), Positives = 69/141 (48%)
Query: 125 DQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKL 184
D + +WD+ + + + T++ H+ + + F+P + +LA+GS D+T LWD +L
Sbjct: 1149 DSTIKLWDSATGELLQ---TLEGHSDRIQSVVFSPDGK-LLASGSYDQTAKLWDPATGEL 1204
Query: 185 KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEE-QSTEDAEDGPPELL 243
L FE H + V +SP + +LASS + +WD GE Q+ D ++ +
Sbjct: 1205 -LQIFEGHSKWVESVAFSPDGK-LLASSSYGETIKLWD-PVTGELLQTLNDPDESAGSVA 1261
Query: 244 FI-HGGHTAKISDFS---WNP 260
F G A + F W+P
Sbjct: 1262 FSPDGNRLASVDIFDTKIWDP 1282
Score = 37 (18.1 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 418 ELRKIWYPDSNKILSTWN 435
E K+W P + ++L T N
Sbjct: 1234 ETIKLWDPVTGELLQTLN 1251
>UNIPROTKB|I3LTD5 [details] [associations]
symbol:WDR33 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00540000070914 OMA:TVMEVKL EMBL:CU855997
EMBL:CU914448 Ensembl:ENSSSCT00000026043 Uniprot:I3LTD5
Length = 1471
Score = 155 (59.6 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 51/166 (30%), Positives = 74/166 (44%)
Query: 109 VAWHLLHESLF-GSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILAT 167
V WH + GS Q + WD ++ + T+ AH V + N ++L T
Sbjct: 251 VDWHPTKGLVVSGSKDSQQPIKFWDPKT---GQSLATLHAHKNTVMEVKLNLNGNWLL-T 306
Query: 168 GSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIG 227
S D L+D+RNLK +L F HK E V W P +E + AS G+D L W +G
Sbjct: 307 ASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWH---VG 363
Query: 228 EEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 273
E+ E G E+ H I +W+P ++CS S D+
Sbjct: 364 VEK-----EVGGMEM-----AHEGMIWSLAWHPLGH-ILCSGSNDH 398
>UNIPROTKB|B4LJT7 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7244 "Drosophila virilis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CH940648 OMA:SWKCVCT OrthoDB:EOG45DV4X
RefSeq:XP_002049403.1 ProteinModelPortal:B4LJT7 STRING:B4LJT7
EnsemblMetazoa:FBtr0237487 GeneID:6626094 KEGG:dvi:Dvir_GJ21562
FlyBase:FBgn0208682 InParanoid:B4LJT7 Uniprot:B4LJT7
Length = 331
Score = 146 (56.5 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 42/177 (23%), Positives = 79/177 (44%)
Query: 109 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATG 168
VAWH S F S +D+ + IW + + + D H + + ++P EY LA+
Sbjct: 20 VAWHPKGNS-FASCGEDKAIRIWSLSGNTWTTKTILSDGHKRTIREVRWSPCGEY-LASA 77
Query: 169 SADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGE 228
S D T A+W L E H++E+ V WS + +LA+ D+ + +W+++ G+
Sbjct: 78 SFDATTAIWSKHECTATL---EGHENEVKSVSWS-RSGGLLATCSRDKSVWIWEVA--GD 131
Query: 229 EQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQEYCDSTDSD 285
++ E + H+ + W+P + + + ++ I + DSD
Sbjct: 132 DEF---------ECAAVLNAHSQDVKRVVWHPTKEVLASASYDNTIKMFAESALDSD 179
>UNIPROTKB|I3LTI2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001826 "inner cell mass
cell differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 InterPro:IPR011047 SUPFAM:SSF50998
PRINTS:PR00319 GO:GO:0001826 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 EMBL:FP565655
RefSeq:XP_003358201.1 Ensembl:ENSSSCT00000026878 GeneID:100626208
KEGG:ssc:100626208 Uniprot:I3LTI2
Length = 485
Score = 149 (57.5 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 38/126 (30%), Positives = 66/126 (52%)
Query: 103 PLSRQDVAWHLLHESLFG-------SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCL 155
PL+R L+++ LF S + D+ + +WD R+ K ++ H A V +
Sbjct: 364 PLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRT---GKYLASLRGHVAAVYQI 420
Query: 156 SFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTD 215
+++ S +L +GS+D T+ +WD++ KL H DE++ V WSP + + AS G D
Sbjct: 421 AWSADSR-LLVSGSSDSTLKVWDVKAQKLAA-DLPGHADEVYAVDWSPDGQRV-ASGGKD 477
Query: 216 RRLHVW 221
+ L +W
Sbjct: 478 KCLRIW 483
Score = 146 (56.5 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 36/103 (34%), Positives = 53/103 (51%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
S +DD L +W KP + H A +N + F+P S I+A+ S DK++ LWD R
Sbjct: 346 SGSDDFTLFLWSPAEDK--KPLARMTGHQALINQVLFSPDSR-IIASASFDKSIKLWDGR 402
Query: 181 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDL 223
K L S H ++Q+ WS + +L S +D L VWD+
Sbjct: 403 TGKY-LASLRGHVAAVYQIAWSADSR-LLVSGSSDSTLKVWDV 443
Score = 120 (47.3 bits), Expect = 0.00035, P = 0.00035
Identities = 42/153 (27%), Positives = 76/153 (49%)
Query: 134 RSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHK 193
R V++ + +++ H+ V ++F+P +Y LA+GS D TV WDL + + + + H+
Sbjct: 99 RVRAVTRCTSSLEGHSEAVISVAFSPTGKY-LASGSGDTTVRFWDL-STETPHFTCQGHR 156
Query: 194 DEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKI 253
+ + WSP + LAS + ++ +WD S G++ A GH+ I
Sbjct: 157 HWVLSISWSPDGKK-LASGCKNGQILLWDPST-GKQVGRALA------------GHSKWI 202
Query: 254 SDFSWNP---N-EPWVICSVSEDNIMQEYCDST 282
+ SW P N E + S S+D ++ + D+T
Sbjct: 203 TALSWEPLHANPECRYVASSSKDGSVRVW-DTT 234
>MGI|MGI:2429770 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:2429770 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
EMBL:AL603745 GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855
OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154 CTD:54475
HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS EMBL:BC018399 IPI:IPI00124677
RefSeq:NP_663406.2 UniGene:Mm.29176 ProteinModelPortal:Q8VEJ4
SMR:Q8VEJ4 STRING:Q8VEJ4 PhosphoSite:Q8VEJ4 PaxDb:Q8VEJ4
PRIDE:Q8VEJ4 Ensembl:ENSMUST00000103213 GeneID:217011
KEGG:mmu:217011 InParanoid:B1ARD5 NextBio:375506 Bgee:Q8VEJ4
CleanEx:MM_NLE1 Genevestigator:Q8VEJ4 GermOnline:ENSMUSG00000020692
Uniprot:Q8VEJ4
Length = 485
Score = 149 (57.5 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 38/126 (30%), Positives = 66/126 (52%)
Query: 103 PLSRQDVAWHLLHESLFG-------SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCL 155
PL+R L+++ LF S + D+ + +WD R+ K ++ H A V +
Sbjct: 364 PLARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRT---GKYLASLRGHVAAVYQI 420
Query: 156 SFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTD 215
+++ S +L +GS+D T+ +WD++ KL H DE++ V WSP + + AS G D
Sbjct: 421 AWSADSR-LLVSGSSDSTLKVWDVKAQKLAT-DLPGHADEVYAVDWSPDGQRV-ASGGKD 477
Query: 216 RRLHVW 221
+ L +W
Sbjct: 478 KCLRIW 483
Score = 145 (56.1 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 36/103 (34%), Positives = 53/103 (51%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
S +DD L +W KP + H A +N + F+P S I+A+ S DK++ LWD R
Sbjct: 346 SGSDDFTLFLWSPAEDK--KPLARMTGHQALINQVLFSPDSR-IVASASFDKSIKLWDGR 402
Query: 181 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDL 223
K L S H ++Q+ WS + +L S +D L VWD+
Sbjct: 403 TGKY-LASLRGHVAAVYQIAWSADSR-LLVSGSSDSTLKVWDV 443
Score = 117 (46.2 bits), Expect = 0.00074, P = 0.00074
Identities = 27/91 (29%), Positives = 51/91 (56%)
Query: 134 RSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHK 193
R V++ + +++ H+ V ++F+P +Y LA+GS D TV WDL + + + + H+
Sbjct: 99 RVRAVTRCTSSLEGHSEAVISVAFSPTGKY-LASGSGDTTVRFWDL-STETPHFTCKGHR 156
Query: 194 DEIFQVQWSPHNETILASSGTDRRLHVWDLS 224
+ + WSP + LAS + ++ +WD S
Sbjct: 157 HWVLSISWSPDGKK-LASGCKNGQVLLWDPS 186
>ZFIN|ZDB-GENE-030131-371 [details] [associations]
symbol:wdr12 "WD repeat domain 12" species:7955
"Danio rerio" [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS]
[GO:0005654 "nucleoplasm" evidence=ISS] [GO:0005730 "nucleolus"
evidence=ISS] [GO:0008283 "cell proliferation" evidence=ISS]
[GO:0030687 "preribosome, large subunit precursor" evidence=ISS]
[GO:0070545 "PeBoW complex" evidence=ISS] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-030131-371 GO:GO:0005654 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030687
GO:GO:0070545 GO:GO:0000463 HSSP:P16649 GO:GO:0000466
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464
OMA:LQTRFFT HAMAP:MF_03029 CTD:55759 GeneTree:ENSGT00640000091456
HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM EMBL:BC044198 EMBL:BC067331
EMBL:BC155268 IPI:IPI00501657 RefSeq:NP_955851.1 UniGene:Dr.76721
ProteinModelPortal:Q6NX08 STRING:Q6NX08 PRIDE:Q6NX08 DNASU:321652
Ensembl:ENSDART00000012903 GeneID:321652 KEGG:dre:321652
InParanoid:Q6NX08 NextBio:20807472 Bgee:Q6NX08 Uniprot:Q6NX08
Length = 422
Score = 148 (57.2 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 32/101 (31%), Positives = 54/101 (53%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
S + D+ + +WD RS + S ++ +H V + + P E+ L +GS D V LWD R
Sbjct: 313 SGSTDRHVRLWDPRSKDGSLVLLSLTSHNGWVTAVRWAPSHEHQLVSGSLDNVVKLWDTR 372
Query: 181 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVW 221
+ K L+ +H+D++ W+ N IL S G D +L+ +
Sbjct: 373 SCKAPLYDLAAHEDKVLCADWT-ENGLIL-SGGADNKLYTY 411
Score = 128 (50.1 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 33/104 (31%), Positives = 50/104 (48%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
S + D + +WD + T+ NC+S++P LA+GS D+ V LWD R
Sbjct: 272 SASWDHTIRLWDAETGGQKS---TLSGSKV-FNCISYSPLCRR-LASGSTDRHVRLWDPR 326
Query: 181 NL--KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWD 222
+ L L S SH + V+W+P +E L S D + +WD
Sbjct: 327 SKDGSLVLLSLTSHNGWVTAVRWAPSHEHQLVSGSLDNVVKLWD 370
>RGD|1308301 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007219
"Notch signaling pathway" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:1308301
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972
Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS
EMBL:BC166567 IPI:IPI00896225 RefSeq:NP_001121006.1
UniGene:Rn.19087 STRING:B2GV82 Ensembl:ENSRNOT00000011320
GeneID:303372 KEGG:rno:303372 NextBio:651216 Genevestigator:B2GV82
Uniprot:B2GV82
Length = 487
Score = 149 (57.5 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 38/126 (30%), Positives = 66/126 (52%)
Query: 103 PLSRQDVAWHLLHESLFG-------SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCL 155
PL+R L+++ LF S + D+ + +WD R+ K ++ H A V +
Sbjct: 366 PLARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRT---GKYLASLRGHVAAVYQI 422
Query: 156 SFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTD 215
+++ S +L +GS+D T+ +WD++ KL H DE++ V WSP + + AS G D
Sbjct: 423 AWSADSR-LLVSGSSDSTLKVWDVKAQKLTT-DLPGHADEVYAVDWSPDGQRV-ASGGKD 479
Query: 216 RRLHVW 221
+ L +W
Sbjct: 480 KCLRIW 485
Score = 145 (56.1 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 36/103 (34%), Positives = 53/103 (51%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 180
S +DD L +W KP + H A +N + F+P S I+A+ S DK++ LWD R
Sbjct: 348 SGSDDFTLFLWSPAEDK--KPLARMTGHQALINQVLFSPDSR-IVASASFDKSIKLWDGR 404
Query: 181 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDL 223
K L S H ++Q+ WS + +L S +D L VWD+
Sbjct: 405 TGKY-LASLRGHVAAVYQIAWSADSR-LLVSGSSDSTLKVWDV 445
Score = 118 (46.6 bits), Expect = 0.00058, P = 0.00058
Identities = 27/91 (29%), Positives = 51/91 (56%)
Query: 134 RSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHK 193
R V++ + +++ H+ V ++F+P +Y LA+GS D TV WDL + + + + H+
Sbjct: 101 RVRAVTRCTSSLEGHSEAVISVAFSPTGKY-LASGSGDTTVRFWDL-STETPHFTCKGHR 158
Query: 194 DEIFQVQWSPHNETILASSGTDRRLHVWDLS 224
+ + WSP + LAS + ++ +WD S
Sbjct: 159 HWVLSISWSPDGKK-LASGCKNGQILLWDPS 188
>UNIPROTKB|A6QLZ8 [details] [associations]
symbol:CORO6 "Coronin" species:9913 "Bos taurus"
[GO:0051015 "actin filament binding" evidence=ISS] [GO:0030036
"actin cytoskeleton organization" evidence=ISS] [GO:0015629 "actin
cytoskeleton" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0015629 eggNOG:COG2319
GO:GO:0051015 GeneTree:ENSGT00550000074317 HOGENOM:HOG000166356
HOVERGEN:HBG059978 InterPro:IPR015505 InterPro:IPR015048
InterPro:IPR015049 PANTHER:PTHR10856 Pfam:PF08953 Pfam:PF08954
CTD:84940 OMA:PFYDADS EMBL:DAAA02048621 EMBL:BC148144
IPI:IPI00685662 RefSeq:NP_001095752.1 UniGene:Bt.6619 SMR:A6QLZ8
Ensembl:ENSBTAT00000001490 GeneID:614661 KEGG:bta:614661
NextBio:20899219 Uniprot:A6QLZ8
Length = 431
Score = 148 (57.2 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 31/122 (25%), Positives = 65/122 (53%)
Query: 108 DVAWHLLHESLFGSVADDQKLMIWD----TRSHNVSKPSHTVDAHTAEVNCLSFNPYSEY 163
D+ W ++++ S +DD +M+W T ++++P T++ H+ V LS++P +
Sbjct: 86 DIDWCPHNDNVIASASDDTTIMVWQIPDYTPVRSITEPIITLEGHSKRVGILSWHPTARN 145
Query: 164 ILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDL 223
+L + D + +W++ ++ L + H D I V W+ N ++LA++ D+ L + D
Sbjct: 146 VLLSAGGDNVIIIWNVGTGEVLLSLDDMHPDVIHSVCWNT-NGSLLATTCKDKTLRIIDP 204
Query: 224 SK 225
K
Sbjct: 205 RK 206
>DICTYBASE|DDB_G0285601 [details] [associations]
symbol:cdc20 "cdc20/fizzy domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 UniPathway:UPA00143
dictyBase:DDB_G0285601 GO:GO:0005634 GO:GO:0045335 GO:GO:0051301
GO:GO:0007067 GenomeReviews:CM000153_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
EMBL:AAFI02000079 eggNOG:COG2319 GO:GO:0016567 RefSeq:XP_638150.1
ProteinModelPortal:Q54MZ3 STRING:Q54MZ3 EnsemblProtists:DDB0237885
GeneID:8625198 KEGG:ddi:DDB_G0285601 KO:K03363 OMA:DAGTYSI
ProtClustDB:CLSZ2430186 Uniprot:Q54MZ3
Length = 499
Score = 149 (57.5 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 33/104 (31%), Positives = 58/104 (55%)
Query: 121 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATG--SADKTVALWD 178
S +D + IWD S N P+HT + HTA V L++ P+ +LATG +AD+T+ W+
Sbjct: 323 SGGNDNIINIWDINSENFETPAHTFEQHTAAVRALAWCPFQPNLLATGGGAADRTIRFWN 382
Query: 179 LRNLKLKLHSFESHKDEIFQVQWSPHNETILASSG-TDRRLHVW 221
+ L++ ++ ++ +QWS +++S G + +L VW
Sbjct: 383 TIT-GVCLNTVDT-MSQVCSIQWSTTYRELVSSHGYSQNQLCVW 424
Score = 135 (52.6 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 38/136 (27%), Positives = 67/136 (49%)
Query: 128 LMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLH 187
+ +WD +H +K + H V L++N +YIL++GS+D + D+R +
Sbjct: 247 IQLWDV-AH--TKKVRELRGHAGRVGALAWN---DYILSSGSSDTNIFNHDVRVQNHHVS 300
Query: 188 SFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHG 247
+ H E+ ++WS H+ LAS G D +++WD++ +E+ E P F
Sbjct: 301 TLSGHSQEVCGLKWS-HDGGQLASGGNDNIINIWDIN-------SENFET--PAHTFEQ- 349
Query: 248 GHTAKISDFSWNPNEP 263
HTA + +W P +P
Sbjct: 350 -HTAAVRALAWCPFQP 364
>ZFIN|ZDB-GENE-040426-1202 [details] [associations]
symbol:coro6 "coronin 6" species:7955 "Danio
rerio" [GO:0015629 "actin cytoskeleton" evidence=IBA] [GO:0030036
"actin cytoskeleton organization" evidence=IBA] [GO:0051015 "actin
filament binding" evidence=IBA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-040426-1202
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0015629 eggNOG:COG2319 GO:GO:0051015 HOGENOM:HOG000166356
HOVERGEN:HBG059978 OrthoDB:EOG4RNB8C InterPro:IPR015505
InterPro:IPR015048 InterPro:IPR015049 PANTHER:PTHR10856
Pfam:PF08953 Pfam:PF08954 CTD:84940 EMBL:BC054129 IPI:IPI00504691
RefSeq:NP_956690.1 UniGene:Dr.12674 ProteinModelPortal:Q7SZ58
SMR:Q7SZ58 GeneID:393367 KEGG:dre:393367 NextBio:20814416
ArrayExpress:Q7SZ58 Uniprot:Q7SZ58
Length = 436
Score = 148 (57.2 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 33/136 (24%), Positives = 68/136 (50%)
Query: 98 QNFPFPLSRQ----DVAWHLLHESLFGSVADDQKLMIWDTRSHN----VSKPSHTVDAHT 149
+N+P + D+ W ++++ S ++D M+W H +S+P ++ H+
Sbjct: 72 KNYPLVVGHSGPVLDIDWCPHNDNILASCSEDTTAMVWQIPDHTPSRPISEPIVVLEGHS 131
Query: 150 AEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETIL 209
V + ++P + IL T +D + +W++ + L + + H D I+ V W+ +N ++
Sbjct: 132 KRVGIIKWHPTARNILLTAGSDNLIIIWNVGTGEA-LITMDDHPDLIYSVGWN-YNGSLF 189
Query: 210 ASSGTDRRLHVWDLSK 225
++ DRRL V D K
Sbjct: 190 CTTCKDRRLRVCDPRK 205
>TAIR|locus:2043929 [details] [associations]
symbol:AT2G43770 "AT2G43770" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE EMBL:AC002333 UniGene:At.66405 EMBL:AY093182
EMBL:BT008828 IPI:IPI00529336 PIR:C84870 RefSeq:NP_181905.1
ProteinModelPortal:O22826 SMR:O22826 IntAct:O22826 STRING:O22826
PaxDb:O22826 PRIDE:O22826 EnsemblPlants:AT2G43770.1 GeneID:818980
KEGG:ath:AT2G43770 TAIR:At2g43770 InParanoid:O22826
PhylomeDB:O22826 ProtClustDB:CLSN2683090 ArrayExpress:O22826
Genevestigator:O22826 Uniprot:O22826
Length = 343
Score = 146 (56.5 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 50/186 (26%), Positives = 85/186 (45%)
Query: 98 QNFPFPLSRQDVAWHLLHESLF-GSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLS 156
Q FP V++ + +F G V +D K +WD R + + T++ H + +S
Sbjct: 175 QTFPDKYQITAVSFSDAADKIFTGGVDNDVK--VWDLRK---GEATMTLEGHQDTITGMS 229
Query: 157 FNPYSEYILATGSADKTVALWDLR-----NLKLKLHSFESHKDE--IFQVQWSPHNETIL 209
+P Y+L G D + +WD+R N +K+ H E + + WSP +
Sbjct: 230 LSPDGSYLLTNGM-DNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKVT 288
Query: 210 ASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSV 269
A S +DR +H+WD + + T ++ GHT +++ ++P EP +I S
Sbjct: 289 AGS-SDRMVHIWDTTS----RRT----------IYKLPGHTGSVNECVFHPTEP-IIGSC 332
Query: 270 SED-NI 274
S D NI
Sbjct: 333 SSDKNI 338
Score = 114 (45.2 bits), Expect = 0.00090, P = 0.00090
Identities = 32/132 (24%), Positives = 60/132 (45%)
Query: 134 RSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHK 193
R+ ++ P + H + V + FNP ++A+GS D+ + LW + + HK
Sbjct: 38 RTSSLEAPIMLLSGHPSAVYTMKFNPAGT-LIASGSHDREIFLWRVHGDCKNFMVLKGHK 96
Query: 194 DEIFQVQWSPHNETILASSGTDRRLHVWD------LSKIGEEQSTEDA----EDGPPELL 243
+ I + W+ I+++S D+ + WD + K+ E S ++ GPP ++
Sbjct: 97 NAILDLHWTSDGSQIVSAS-PDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLII 155
Query: 244 FIHGGHTAKISD 255
TAK+ D
Sbjct: 156 SGSDDGTAKLWD 167
>UNIPROTKB|G4NFU5 [details] [associations]
symbol:MGG_08708 "WD repeat-containing protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001236 PRINTS:PR00319
KO:K14855 RefSeq:XP_003719269.1 ProteinModelPortal:G4NFU5
EnsemblFungi:MGG_08708T0 GeneID:2678953 KEGG:mgr:MGG_08708
Uniprot:G4NFU5
Length = 526
Score = 149 (57.5 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 32/96 (33%), Positives = 49/96 (51%)
Query: 138 VSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIF 197
VS+ +H + H + C F+P S LATGS D T +WD K H+ + H +
Sbjct: 141 VSRLAHRIPGHGEPILCAQFSPASSARLATGSGDNTARIWDAETGTPK-HTLKGHAGWVL 199
Query: 198 QVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTE 233
V WSP T LA+ D+ + +WD + G++ +E
Sbjct: 200 GVSWSPDG-TRLATCSMDKTVRIWD-PETGKQVGSE 233
Score = 139 (54.0 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 33/105 (31%), Positives = 52/105 (49%)
Query: 117 SLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVAL 176
S+ S D +W+ R K +T+ H A V SF+ S +L T S D T+ +
Sbjct: 426 SMIASAGWDNATKLWNARD---GKFINTLRGHVAPVYQCSFSADSR-LLVTASKDTTLKV 481
Query: 177 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVW 221
W++R KL H+DE++ V WSP + + S G D+ + +W
Sbjct: 482 WNVRTGKLAT-DLPGHEDEVYGVDWSPDGQRV-GSGGRDKAVRLW 524
WARNING: HSPs involving 662 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.132 0.409 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 437 416 0.00081 118 3 11 22 0.40 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 912
No. of states in DFA: 626 (67 KB)
Total size of DFA: 322 KB (2161 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 38.61u 0.15s 38.76t Elapsed: 00:00:03
Total cpu time: 38.67u 0.15s 38.82t Elapsed: 00:00:03
Start: Thu Aug 15 17:01:50 2013 End: Thu Aug 15 17:01:53 2013
WARNINGS ISSUED: 2