RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy4572
(345 letters)
>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 39
Score = 41.9 bits (99), Expect = 2e-06
Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 46 PHKCEHCEKEFENRRALKRHEKN-HTQEKTFPCTV 79
P+ C+ C K F L H K HT E+ C V
Sbjct: 5 PYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39
Score = 28.8 bits (65), Expect = 0.088
Identities = 11/42 (26%), Positives = 19/42 (45%), Gaps = 12/42 (28%)
Query: 158 PYQCETCRKLFLSKYSLFTHNKKHLPIEERLH-----YQCEL 194
PY C++C K F L H K ++H ++C++
Sbjct: 5 PYICQSCGKGFSRPDHLNGHIK-------QVHTSERPHKCQV 39
Score = 25.3 bits (56), Expect = 1.6
Identities = 6/17 (35%), Positives = 9/17 (52%)
Query: 190 YQCELCGKSFNNKQTFS 206
Y C+ CGK F+ +
Sbjct: 6 YICQSCGKGFSRPDHLN 22
Score = 25.0 bits (55), Expect = 2.2
Identities = 6/23 (26%), Positives = 10/23 (43%)
Query: 103 FKCDQCPYVAKRIKYLRYHMKKH 125
+ C C R +L H+K+
Sbjct: 6 YICQSCGKGFSRPDHLNGHIKQV 28
Score = 24.6 bits (54), Expect = 2.5
Identities = 10/38 (26%), Positives = 14/38 (36%), Gaps = 1/38 (2%)
Query: 70 TQEKTFPCTVCLKMFKTKAQREEHIAS-HVTDSEFKCD 106
+ K + C C K F HI H ++ KC
Sbjct: 1 SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ 38
>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo
sapiens) [TaxId: 9606]}
Length = 53
Score = 40.1 bits (93), Expect = 1e-05
Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Query: 46 PHKCEHCEKEFENRRALKRHEKNHTQEKTFPCTVCLKMFKTKAQREEHIASH 97
+ C+ C K F ++ RH H + + C VC K FK K H+ H
Sbjct: 3 LYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53
Score = 38.9 bits (90), Expect = 3e-05
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 72 EKTFPCTVCLKMFKTKAQREEHIASHVTDSEFKCDQCPYVAKRIKYLRYHMKKH 125
+K +PC C K F K+QR+ H++ H+ + C C K +L HMK H
Sbjct: 1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53
Score = 34.7 bits (79), Expect = 0.001
Identities = 16/49 (32%), Positives = 19/49 (38%), Gaps = 4/49 (8%)
Query: 158 PYQCETCRKLFLSKYSLFTHNKKHLPIEERLHYQCELCGKSFNNKQTFS 206
Y C+ C K F K H HL + Y C +CGK F K
Sbjct: 3 LYPCQ-CGKSFTHKSQRDRHMSMHLGLR---PYGCGVCGKKFKMKHHLV 47
Score = 33.1 bits (75), Expect = 0.004
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Query: 133 CEPCQEGFFSRDKLETHNIAKHGAQPYQCETCRKLFLSKYSLFTHNKKH 181
C+ C + F + + + H G +PY C C K F K+ L H K H
Sbjct: 6 CQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53
Score = 32.3 bits (73), Expect = 0.007
Identities = 11/47 (23%), Positives = 14/47 (29%), Gaps = 1/47 (2%)
Query: 103 FKCDQCPYVAKRIKYLRYHMKKHRKEYSAYCEPCQEGFFSRDKLETH 149
+ C QC HM H C C + F + L H
Sbjct: 4 YPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGH 49
>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on
Saccharomyces cerevisiae sequence}
Length = 29
Score = 38.4 bits (90), Expect = 2e-05
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 46 PHKCEHCEKEFENRRALKRHEKNHTQEK 73
CE C + F + LKRH ++HT EK
Sbjct: 2 SFVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 28.0 bits (63), Expect = 0.15
Identities = 7/24 (29%), Positives = 11/24 (45%)
Query: 158 PYQCETCRKLFLSKYSLFTHNKKH 181
+ CE C + F + L H + H
Sbjct: 2 SFVCEVCTRAFARQEHLKRHYRSH 25
Score = 26.0 bits (58), Expect = 0.71
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 103 FKCDQCPYVAKRIKYLRYHMKKHRKE 128
F C+ C R ++L+ H + H E
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTNE 28
Score = 24.9 bits (55), Expect = 1.7
Identities = 4/13 (30%), Positives = 9/13 (69%)
Query: 190 YQCELCGKSFNNK 202
+ CE+C ++F +
Sbjct: 3 FVCEVCTRAFARQ 15
>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 33
Score = 37.6 bits (88), Expect = 5e-05
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 46 PHKCEHCEKEFENRRALKRHEKNHTQE 72
P+ C C K F L +H++ HT E
Sbjct: 7 PYGCVECGKAFSRSSILVQHQRVHTGE 33
Score = 31.1 bits (71), Expect = 0.012
Identities = 10/27 (37%), Positives = 12/27 (44%)
Query: 155 GAQPYQCETCRKLFLSKYSLFTHNKKH 181
G +PY C C K F L H + H
Sbjct: 4 GEKPYGCVECGKAFSRSSILVQHQRVH 30
Score = 30.3 bits (69), Expect = 0.023
Identities = 9/29 (31%), Positives = 13/29 (44%)
Query: 69 HTQEKTFPCTVCLKMFKTKAQREEHIASH 97
H+ EK + C C K F + +H H
Sbjct: 2 HSGEKPYGCVECGKAFSRSSILVQHQRVH 30
Score = 28.0 bits (63), Expect = 0.14
Identities = 7/26 (26%), Positives = 10/26 (38%)
Query: 103 FKCDQCPYVAKRIKYLRYHMKKHRKE 128
+ C +C R L H + H E
Sbjct: 8 YGCVECGKAFSRSSILVQHQRVHTGE 33
Score = 25.7 bits (57), Expect = 1.0
Identities = 6/17 (35%), Positives = 8/17 (47%)
Query: 190 YQCELCGKSFNNKQTFS 206
Y C CGK+F+
Sbjct: 8 YGCVECGKAFSRSSILV 24
>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 29
Score = 36.9 bits (86), Expect = 9e-05
Identities = 9/28 (32%), Positives = 11/28 (39%)
Query: 46 PHKCEHCEKEFENRRALKRHEKNHTQEK 73
C C K F L +H K H +K
Sbjct: 2 KFACPECPKRFMRSDHLSKHIKTHQNKK 29
Score = 27.7 bits (62), Expect = 0.19
Identities = 8/24 (33%), Positives = 10/24 (41%)
Query: 158 PYQCETCRKLFLSKYSLFTHNKKH 181
+ C C K F+ L H K H
Sbjct: 2 KFACPECPKRFMRSDHLSKHIKTH 25
Score = 27.3 bits (61), Expect = 0.26
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 103 FKCDQCPYVAKRIKYLRYHMKKHRKE 128
F C +CP R +L H+K H+ +
Sbjct: 3 FACPECPKRFMRSDHLSKHIKTHQNK 28
Score = 23.5 bits (51), Expect = 5.9
Identities = 5/17 (29%), Positives = 6/17 (35%)
Query: 190 YQCELCGKSFNNKQTFS 206
+ C C K F S
Sbjct: 3 FACPECPKRFMRSDHLS 19
>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 35.8 bits (83), Expect = 2e-04
Identities = 9/28 (32%), Positives = 14/28 (50%)
Query: 46 PHKCEHCEKEFENRRALKRHEKNHTQEK 73
P+ C HC+K F ++ L H K +
Sbjct: 8 PYACSHCDKTFRQKQLLDMHFKRYHDPN 35
Score = 30.8 bits (70), Expect = 0.015
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 155 GAQPYQCETCRKLFLSKYSLFTHNKKH 181
G +PY C C K F K L H K++
Sbjct: 5 GEKPYACSHCDKTFRQKQLLDMHFKRY 31
Score = 30.4 bits (69), Expect = 0.018
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 69 HTQEKTFPCTVCLKMFKTKAQREEHIASHVTDSEF 103
HT EK + C+ C K F+ K + H + D F
Sbjct: 3 HTGEKPYACSHCDKTFRQKQLLDMHFKRY-HDPNF 36
Score = 28.1 bits (63), Expect = 0.14
Identities = 5/26 (19%), Positives = 11/26 (42%)
Query: 103 FKCDQCPYVAKRIKYLRYHMKKHRKE 128
+ C C ++ + L H K++
Sbjct: 9 YACSHCDKTFRQKQLLDMHFKRYHDP 34
Score = 24.6 bits (54), Expect = 2.6
Identities = 7/18 (38%), Positives = 8/18 (44%)
Query: 189 HYQCELCGKSFNNKQTFS 206
Y C C K+F KQ
Sbjct: 8 PYACSHCDKTFRQKQLLD 25
>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 67
Score = 35.4 bits (82), Expect = 7e-04
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 45 GPHKCEHCEKEFENRRALKRHEK 67
G H+C C + F + LK H +
Sbjct: 14 GLHRCLACARYFIDSTNLKTHFR 36
Score = 27.4 bits (61), Expect = 0.46
Identities = 5/22 (22%), Positives = 7/22 (31%)
Query: 75 FPCTVCLKMFKTKAQREEHIAS 96
C C + F + H S
Sbjct: 16 HRCLACARYFIDSTNLKTHFRS 37
Score = 25.0 bits (55), Expect = 3.8
Identities = 8/25 (32%), Positives = 13/25 (52%), Gaps = 2/25 (8%)
Query: 159 YQCETCRKLFLSKYSLFTHN--KKH 181
++C C + F+ +L TH K H
Sbjct: 16 HRCLACARYFIDSTNLKTHFRSKDH 40
>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 28
Score = 34.1 bits (79), Expect = 7e-04
Identities = 8/25 (32%), Positives = 11/25 (44%)
Query: 46 PHKCEHCEKEFENRRALKRHEKNHT 70
P +C C + F L H + HT
Sbjct: 3 PFQCRICMRNFSRSDHLTTHIRTHT 27
Score = 28.7 bits (65), Expect = 0.071
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 158 PYQCETCRKLFLSKYSLFTHNKKH 181
P+QC C + F L TH + H
Sbjct: 3 PFQCRICMRNFSRSDHLTTHIRTH 26
Score = 25.3 bits (56), Expect = 1.3
Identities = 4/17 (23%), Positives = 10/17 (58%)
Query: 190 YQCELCGKSFNNKQTFS 206
+QC +C ++F+ +
Sbjct: 4 FQCRICMRNFSRSDHLT 20
Score = 24.5 bits (54), Expect = 2.2
Identities = 7/23 (30%), Positives = 11/23 (47%)
Query: 103 FKCDQCPYVAKRIKYLRYHMKKH 125
F+C C R +L H++ H
Sbjct: 4 FQCRICMRNFSRSDHLTTHIRTH 26
Score = 23.3 bits (51), Expect = 5.9
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 72 EKTFPCTVCLKMFKTKAQREEHIASH 97
+K F C +C++ F HI +H
Sbjct: 1 QKPFQCRICMRNFSRSDHLTTHIRTH 26
>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing
protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId:
9606]}
Length = 38
Score = 34.4 bits (79), Expect = 0.001
Identities = 8/34 (23%), Positives = 14/34 (41%)
Query: 64 RHEKNHTQEKTFPCTVCLKMFKTKAQREEHIASH 97
R E + + + C C K F + +H +H
Sbjct: 2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTH 35
Score = 32.8 bits (75), Expect = 0.003
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 46 PHKCEHCEKEFENRRALKRHEKNHTQE 72
+KC+ C K F + L +H + HT E
Sbjct: 12 RYKCDECGKSFSHSSDLSKHRRTHTGE 38
Score = 27.4 bits (61), Expect = 0.29
Identities = 8/35 (22%), Positives = 13/35 (37%), Gaps = 5/35 (14%)
Query: 152 AKH-----GAQPYQCETCRKLFLSKYSLFTHNKKH 181
+ + Y+C+ C K F L H + H
Sbjct: 1 GRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTH 35
Score = 23.2 bits (50), Expect = 9.4
Identities = 6/29 (20%), Positives = 10/29 (34%)
Query: 121 HMKKHRKEYSAYCEPCQEGFFSRDKLETH 149
+ R+ C+ C + F L H
Sbjct: 3 SEWQQRERRRYKCDECGKSFSHSSDLSKH 31
>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 35
Score = 34.0 bits (78), Expect = 0.001
Identities = 9/27 (33%), Positives = 10/27 (37%)
Query: 46 PHKCEHCEKEFENRRALKRHEKNHTQE 72
P C C F + RH K HT
Sbjct: 7 PFVCRICLSAFTTKANCARHLKVHTDT 33
Score = 28.2 bits (63), Expect = 0.15
Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 69 HTQEKTFPCTVCLKMFKTKAQREEHIASHVTDS 101
+ ++ F C +CL F TKA H+ H TD+
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVH-TDT 33
Score = 27.4 bits (61), Expect = 0.24
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 155 GAQPYQCETCRKLFLSKYSLFTHNKKH 181
G +P+ C C F +K + H K H
Sbjct: 4 GKRPFVCRICLSAFTTKANCARHLKVH 30
Score = 24.7 bits (54), Expect = 1.9
Identities = 7/28 (25%), Positives = 8/28 (28%)
Query: 103 FKCDQCPYVAKRIKYLRYHMKKHRKEYS 130
F C C H+K H S
Sbjct: 8 FVCRICLSAFTTKANCARHLKVHTDTLS 35
>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 33.9 bits (78), Expect = 0.001
Identities = 10/33 (30%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Query: 47 HKCEH--CEKEFENRRALKRHEKNHTQEKTFPC 77
C C K F ++ LK H K H+ + + C
Sbjct: 2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYIC 34
>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 31
Score = 33.4 bits (77), Expect = 0.002
Identities = 12/30 (40%), Positives = 15/30 (50%), Gaps = 2/30 (6%)
Query: 46 PHKCEH--CEKEFENRRALKRHEKNHTQEK 73
P C C K F L+RH++ HT EK
Sbjct: 2 PFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 23.8 bits (52), Expect = 4.3
Identities = 8/26 (30%), Positives = 10/26 (38%), Gaps = 2/26 (7%)
Query: 158 PYQC--ETCRKLFLSKYSLFTHNKKH 181
P+ C C K F L H + H
Sbjct: 2 PFMCTWSYCGKRFTRSDELQRHKRTH 27
>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 32.6 bits (75), Expect = 0.004
Identities = 8/28 (28%), Positives = 13/28 (46%), Gaps = 1/28 (3%)
Query: 46 PHKCEHCEKEFENRRALKRHE-KNHTQE 72
P++C C F +K H + HT+
Sbjct: 8 PYECYICHARFTQSGTMKMHILQKHTEN 35
Score = 31.1 bits (71), Expect = 0.011
Identities = 9/32 (28%), Positives = 14/32 (43%)
Query: 69 HTQEKTFPCTVCLKMFKTKAQREEHIASHVTD 100
H+ EK + C +C F + HI T+
Sbjct: 3 HSGEKPYECYICHARFTQSGTMKMHILQKHTE 34
Score = 29.6 bits (67), Expect = 0.037
Identities = 7/27 (25%), Positives = 12/27 (44%)
Query: 155 GAQPYQCETCRKLFLSKYSLFTHNKKH 181
G +PY+C C F ++ H +
Sbjct: 5 GEKPYECYICHARFTQSGTMKMHILQK 31
Score = 26.5 bits (59), Expect = 0.48
Identities = 4/26 (15%), Positives = 11/26 (42%)
Query: 103 FKCDQCPYVAKRIKYLRYHMKKHRKE 128
++C C + ++ H+ + E
Sbjct: 9 YECYICHARFTQSGTMKMHILQKHTE 34
Score = 24.6 bits (54), Expect = 2.2
Identities = 4/13 (30%), Positives = 6/13 (46%)
Query: 190 YQCELCGKSFNNK 202
Y+C +C F
Sbjct: 9 YECYICHARFTQS 21
>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 26
Score = 32.2 bits (74), Expect = 0.004
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 46 PHKCEHCEKEFENRRALKRHEKNHT 70
P+KC C K F L H++ HT
Sbjct: 2 PYKCLECGKAFSQNSGLINHQRIHT 26
Score = 27.2 bits (61), Expect = 0.22
Identities = 9/24 (37%), Positives = 11/24 (45%)
Query: 158 PYQCETCRKLFLSKYSLFTHNKKH 181
PY+C C K F L H + H
Sbjct: 2 PYKCLECGKAFSQNSGLINHQRIH 25
Score = 24.5 bits (54), Expect = 2.3
Identities = 6/13 (46%), Positives = 9/13 (69%)
Query: 190 YQCELCGKSFNNK 202
Y+C CGK+F+
Sbjct: 3 YKCLECGKAFSQN 15
>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 37
Score = 32.4 bits (74), Expect = 0.005
Identities = 8/34 (23%), Positives = 11/34 (32%)
Query: 65 HEKNHTQEKTFPCTVCLKMFKTKAQREEHIASHV 98
+ T K F C C + F H H+
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM 35
Score = 30.1 bits (68), Expect = 0.026
Identities = 12/36 (33%), Positives = 16/36 (44%), Gaps = 3/36 (8%)
Query: 35 SRKSTPQKLDGPHKCEHCEKEFENRRALKRHEKNHT 70
+R ST K P +C C++ F L H K H
Sbjct: 3 TRGSTGIK---PFQCPDCDRSFSRSDHLALHRKRHM 35
Score = 29.7 bits (67), Expect = 0.044
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 155 GAQPYQCETCRKLFLSKYSLFTHNKKHL 182
G +P+QC C + F L H K+H+
Sbjct: 8 GIKPFQCPDCDRSFSRSDHLALHRKRHM 35
Score = 26.2 bits (58), Expect = 0.58
Identities = 8/33 (24%), Positives = 11/33 (33%)
Query: 93 HIASHVTDSEFKCDQCPYVAKRIKYLRYHMKKH 125
F+C C R +L H K+H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 32
Score = 31.9 bits (73), Expect = 0.005
Identities = 11/29 (37%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Query: 46 PHKCEH--CEKEFENRRALKRHEKNHTQE 72
P+ C+H C+K F L RH+K+H ++
Sbjct: 3 PYSCDHPGCDKAFVRNHDLIRHKKSHQEK 31
Score = 23.4 bits (51), Expect = 6.8
Identities = 10/26 (38%), Positives = 12/26 (46%), Gaps = 2/26 (7%)
Query: 158 PYQC--ETCRKLFLSKYSLFTHNKKH 181
PY C C K F+ + L H K H
Sbjct: 3 PYSCDHPGCDKAFVRNHDLIRHKKSH 28
>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 27
Score = 32.0 bits (72), Expect = 0.005
Identities = 14/22 (63%), Positives = 16/22 (72%)
Query: 160 QCETCRKLFLSKYSLFTHNKKH 181
+C TC K FLSKY L HN+KH
Sbjct: 2 ECPTCHKKFLSKYYLKVHNRKH 23
Score = 25.0 bits (54), Expect = 1.6
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 48 KCEHCEKEFENRRALKRHEKNHTQEK 73
+C C K+F ++ LK H + HT EK
Sbjct: 2 ECPTCHKKFLSKYYLKVHNRKHTGEK 27
>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 30
Score = 31.5 bits (72), Expect = 0.006
Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
Query: 46 PHKCEH--CEKEFENRRALKRHEKNHTQE 72
PHKC C K + LK H ++HT E
Sbjct: 2 PHKCTFEGCRKSYSRLENLKTHLRSHTGE 30
Score = 23.8 bits (52), Expect = 4.7
Identities = 10/26 (38%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
Query: 158 PYQC--ETCRKLFLSKYSLFTHNKKH 181
P++C E CRK + +L TH + H
Sbjct: 2 PHKCTFEGCRKSYSRLENLKTHLRSH 27
>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger
domain) {Human (Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 31.2 bits (71), Expect = 0.010
Identities = 9/27 (33%), Positives = 11/27 (40%), Gaps = 2/27 (7%)
Query: 46 PHKCEH--CEKEFENRRALKRHEKNHT 70
P+ C C K+F LK H H
Sbjct: 2 PYVCPFDGCNKKFAQSTNLKSHILTHA 28
Score = 23.5 bits (51), Expect = 5.9
Identities = 9/26 (34%), Positives = 12/26 (46%), Gaps = 2/26 (7%)
Query: 158 PYQC--ETCRKLFLSKYSLFTHNKKH 181
PY C + C K F +L +H H
Sbjct: 2 PYVCPFDGCNKKFAQSTNLKSHILTH 27
>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 47
Score = 31.4 bits (71), Expect = 0.012
Identities = 9/43 (20%), Positives = 18/43 (41%), Gaps = 5/43 (11%)
Query: 33 KRSRKSTPQKLDGPHKCEHCE--KEFENRRALKRHEKNHTQEK 73
+ K P K +C K F+ R ++ H + H +++
Sbjct: 8 DKYVKEMPDK---TFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47
Score = 26.4 bits (58), Expect = 0.79
Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 3/41 (7%)
Query: 59 RRALKRHEKNHTQEKTFPCTVCL--KMFKTKAQREEHIASH 97
R ++ ++ K +KTF C K FK + HI +H
Sbjct: 4 RGSIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTH 43
>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 26
Score = 30.8 bits (69), Expect = 0.014
Identities = 13/25 (52%), Positives = 15/25 (60%)
Query: 46 PHKCEHCEKEFENRRALKRHEKNHT 70
PHKCE C K F + LK H + HT
Sbjct: 1 PHKCEVCGKCFSRKDKLKTHMRCHT 25
Score = 25.0 bits (54), Expect = 1.4
Identities = 11/24 (45%), Positives = 14/24 (58%)
Query: 158 PYQCETCRKLFLSKYSLFTHNKKH 181
P++CE C K F K L TH + H
Sbjct: 1 PHKCEVCGKCFSRKDKLKTHMRCH 24
>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 29
Score = 30.4 bits (69), Expect = 0.022
Identities = 9/27 (33%), Positives = 13/27 (48%), Gaps = 2/27 (7%)
Query: 46 PHKCEH--CEKEFENRRALKRHEKNHT 70
P+ C C++ F L RH + HT
Sbjct: 2 PYACPVESCDRRFSRSADLTRHIRIHT 28
>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger
domain) {Human (Homo sapiens) [TaxId: 9606]}
Length = 30
Score = 30.0 bits (68), Expect = 0.022
Identities = 9/29 (31%), Positives = 13/29 (44%), Gaps = 2/29 (6%)
Query: 46 PHKCEH--CEKEFENRRALKRHEKNHTQE 72
P +C C K F L+ H + HT +
Sbjct: 2 PFQCTFEGCGKRFSLDFNLRTHVRIHTGD 30
>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 37
Score = 29.7 bits (67), Expect = 0.036
Identities = 8/27 (29%), Positives = 16/27 (59%)
Query: 47 HKCEHCEKEFENRRALKRHEKNHTQEK 73
+ C C++EF + +AL H H +++
Sbjct: 6 YTCSFCKREFRSAQALGGHMNVHRRDR 32
Score = 24.3 bits (53), Expect = 3.3
Identities = 10/30 (33%), Positives = 13/30 (43%)
Query: 159 YQCETCRKLFLSKYSLFTHNKKHLPIEERL 188
Y C C++ F S +L H H RL
Sbjct: 6 YTCSFCKREFRSAQALGGHMNVHRRDRARL 35
>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 35
Score = 28.9 bits (64), Expect = 0.073
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 47 HKCEHCEKEFENRRALKRHEKNHTQEKTF 75
CE C K F + L RH+ +H+ EK +
Sbjct: 6 VACEICGKIFRDVYHLNRHKLSHSGEKPY 34
>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA
{Xenopus laevis [TaxId: 8355]}
Length = 29
Score = 28.1 bits (62), Expect = 0.11
Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
Query: 46 PHKCEH--CEKEFENRRALKRHEKNH 69
P++C H C+K F LKRHEK H
Sbjct: 3 PYECPHEGCDKRFSLPSRLKRHEKVH 28
>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 53
Score = 28.0 bits (62), Expect = 0.21
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 75 FPCTVCLKMFKTKAQREEHIASHVTDS 101
PC +C K+F + +H A H S
Sbjct: 7 LPCGLCGKVFTDANRLRQHEAQHGVTS 33
>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 75
Score = 28.5 bits (63), Expect = 0.29
Identities = 12/55 (21%), Positives = 25/55 (45%), Gaps = 12/55 (21%)
Query: 39 TPQKLDGP-HKCEHCEKEFENRRALKRHEKNHTQEKTFPCTVCLKMFKTKAQREE 92
+L ++C+HC+ + ++ L H H +E F+ +A+R+E
Sbjct: 10 NGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEE-----------FQKRAKRQE 53
>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 32
Score = 26.9 bits (59), Expect = 0.31
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 72 EKTFPCTVCLKMFKTKAQREEHIASH 97
EK + C VC FK K + H+ SH
Sbjct: 1 EKPYSCPVCGLRFKRKDRMSYHVRSH 26
>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger
domain) {Human (Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 26.9 bits (59), Expect = 0.35
Identities = 12/26 (46%), Positives = 13/26 (50%)
Query: 47 HKCEHCEKEFENRRALKRHEKNHTQE 72
H C C K F LKRH+ HT E
Sbjct: 3 HVCAECGKAFVESSKLKRHQLVHTGE 28
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Length = 305
Score = 30.0 bits (66), Expect = 0.37
Identities = 25/140 (17%), Positives = 47/140 (33%), Gaps = 6/140 (4%)
Query: 206 SLSNMYVLSLSNMYVLSSSNMYVLSLSNMYVLSLSKVRLNS-----SSNMYVLSLSNMYV 260
+L N++ L L N + S L + L LSK +L + L + +
Sbjct: 53 NLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKELPEKMPKTLQELRVHENEI 112
Query: 261 LSLSNMYVLSLSNMYVLSLSNMYVLSLSNMYVLSLSNMYVLSLSNMYVLSLSNMYVLSLS 320
+ L+ M V+ L L S + + M LS + +++ +
Sbjct: 113 TKVRKSVFNGLNQMIVVELGTNP-LKSSGIENGAFQGMKKLSYIRIADTNITTIPQGLPP 171
Query: 321 NMYVLSLSNMLSSDPLPELL 340
++ L L + L
Sbjct: 172 SLTELHLDGNKITKVDAASL 191
Score = 27.3 bits (59), Expect = 2.4
Identities = 18/78 (23%), Positives = 31/78 (39%)
Query: 237 LSLSKVRLNSSSNMYVLSLSNMYVLSLSNMYVLSLSNMYVLSLSNMYVLSLSNMYVLSLS 296
L L KV + + +L L N + + + +L N++ L L N + +S L
Sbjct: 20 LGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLV 79
Query: 297 NMYVLSLSNMYVLSLSNM 314
+ L LS + L
Sbjct: 80 KLERLYLSKNQLKELPEK 97
Score = 26.2 bits (56), Expect = 7.4
Identities = 23/128 (17%), Positives = 44/128 (34%), Gaps = 6/128 (4%)
Query: 208 SNMYVLSLSNMYVLSSSNMYVLSLSNMYVLSLSKVRLNSSSNMYVLSLSNMYVLSLSNMY 267
+ +L L N + + +L N++ L L +++ S L + L LS
Sbjct: 31 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQ 90
Query: 268 VLSLSN-----MYVLSLSNMYVLSLSNMYVLSLSNMYVLSLSNMYVLSLSNMYVLSLSNM 322
+ L + L + + + L+ M V+ L L S + + M
Sbjct: 91 LKELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNP-LKSSGIENGAFQGM 149
Query: 323 YVLSLSNM 330
LS +
Sbjct: 150 KKLSYIRI 157
>d2dj7a2 g.39.1.3 (A:8-43) Actin-binding LIM protein 3, abLIM-3
{Human (Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 26.8 bits (59), Expect = 0.41
Identities = 8/23 (34%), Positives = 15/23 (65%)
Query: 40 PQKLDGPHKCEHCEKEFENRRAL 62
P K+ GP C C++E ++ ++L
Sbjct: 2 PIKIRGPSHCAGCKEEIKHGQSL 24
>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 30
Score = 26.2 bits (57), Expect = 0.57
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 72 EKTFPCTVCLKMFKTKAQREEHIASH 97
E+ F C+VC + F+ + + H+ SH
Sbjct: 2 EQVFTCSVCQETFRRRMELRLHMVSH 27
Score = 23.5 bits (50), Expect = 5.0
Identities = 10/30 (33%), Positives = 13/30 (43%)
Query: 99 TDSEFKCDQCPYVAKRIKYLRYHMKKHRKE 128
++ F C C +R LR HM H E
Sbjct: 1 SEQVFTCSVCQETFRRRMELRLHMVSHTGE 30
>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 28
Score = 25.9 bits (57), Expect = 0.65
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 46 PHKCEHCEKEFENRRALKRHEKNH 69
P C+ C ++F KRH K H
Sbjct: 3 PFACDICGRKFARSDERKRHTKIH 26
Score = 25.2 bits (55), Expect = 1.6
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 72 EKTFPCTVCLKMFKTKAQREEHIASH 97
EK F C +C + F +R+ H H
Sbjct: 1 EKPFACDICGRKFARSDERKRHTKIH 26
>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId:
8355]}
Length = 26
Score = 25.5 bits (55), Expect = 0.92
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 47 HKCEHCEKEFENRRALKRHEKNH 69
+KC CE+ F + AL RH++ H
Sbjct: 1 YKCGLCERSFVEKSALSRHQRVH 23
>d2gfoa1 d.3.1.9 (A:762-1109) Ubiquitin carboxyl-terminal hydrolase
8 {Human (Homo sapiens) [TaxId: 9606]}
Length = 348
Score = 28.1 bits (61), Expect = 1.4
Identities = 27/179 (15%), Positives = 49/179 (27%), Gaps = 10/179 (5%)
Query: 47 HKCEHCEKEFENRRALKRHEKNHTQEKTFPCTVCLKMFKTKAQREEHIASHVTDSEFKCD 106
+ +NR+ K +H + K + + S +C
Sbjct: 117 DGLHEDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTVQCL 176
Query: 107 QCPYVAKRIKYLRYHMKKHRKEYSAYCEPCQEGFFSRDKLETHNIAKHGAQPYQCETCRK 166
C ++ + Y + C F +KL +N + C CR
Sbjct: 177 TCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNN-------RFYCSHCRA 229
Query: 167 LFLSKYSLFTHNKKHLPIEERLHYQCELCGKSFNNKQTFSLSNMYVLSLSNMYVLSSSN 225
+ SL LP +H + + K S+ + YV+ N
Sbjct: 230 ---RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKN 285
>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 25.1 bits (54), Expect = 1.6
Identities = 7/25 (28%), Positives = 15/25 (60%)
Query: 46 PHKCEHCEKEFENRRALKRHEKNHT 70
P+KC+ C+ + +L +H + H+
Sbjct: 3 PYKCKTCDYAAADSSSLNKHLRIHS 27
>d1up9a_ a.138.1.1 (A:) Cytochrome c3 {Desulfovibrio desulfuricans,
different strains [TaxId: 876]}
Length = 107
Score = 26.7 bits (58), Expect = 1.7
Identities = 12/85 (14%), Positives = 21/85 (24%), Gaps = 7/85 (8%)
Query: 68 NHTQEKTFPCTVCLKMFKTKAQREEHIASHVTDSEFKCDQCPYVAKRIKYLRYHMKKHRK 127
H + C C + K + +S C K K L Y + +
Sbjct: 21 PHAPHEKVECVTCHHLVDGKESYAKCGSSG-------CHDDLTAKKGEKSLYYVVHARGE 73
Query: 128 EYSAYCEPCQEGFFSRDKLETHNIA 152
C C + ++
Sbjct: 74 LKHTSCLACHSKVVAEKPELKKDLT 98
>d1s5pa_ c.31.1.5 (A:) NAD-dependent deacetylase CobB {Escherichia
coli [TaxId: 562]}
Length = 235
Score = 27.8 bits (61), Expect = 1.7
Identities = 13/78 (16%), Positives = 25/78 (32%), Gaps = 1/78 (1%)
Query: 59 RRALKRHEKNHTQEKTFPCTVCLKMFKTKAQREEHIASHVTDSEFKCDQCPYVAKRIKYL 118
AL + + + ++ T + +A I H + +C Q V +
Sbjct: 71 HLALAKLQ-DALGDRFLLVTQNIDNLHERAGNTNVIHMHGELLKVRCSQSGQVLDWTGDV 129
Query: 119 RYHMKKHRKEYSAYCEPC 136
K H ++ A P
Sbjct: 130 TPEDKCHCCQFPAPLRPH 147
>d1sg1x3 g.24.1.1 (X:96-137) Low affinity neurotrophin receptor
p75NTR {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 42
Score = 25.2 bits (55), Expect = 2.0
Identities = 6/10 (60%), Positives = 7/10 (70%)
Query: 133 CEPCQEGFFS 142
CE C EG +S
Sbjct: 23 CEECPEGTYS 32
>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 29
Score = 24.6 bits (53), Expect = 2.4
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 100 DSEFKCDQCPYVAKRIKYLRYHMKKH 125
+ FKC CPY ++ L H++ H
Sbjct: 1 ERPFKCQICPYASRNSSQLTVHLRSH 26
>d1atia2 d.104.1.1 (A:1-394) Glycyl-tRNA synthetase (GlyRS) {Thermus
thermophilus [TaxId: 274]}
Length = 394
Score = 27.7 bits (61), Expect = 2.5
Identities = 18/141 (12%), Positives = 40/141 (28%), Gaps = 19/141 (13%)
Query: 77 CTVCLKMFKT----KAQREEHIASHVTDSEFKCDQCPYVAKRIKYLRYHMKKHRKEYSAY 132
+ K ++ K Q EE + E + + + + +
Sbjct: 90 NRITKKRYRLDHLLKEQPEEVLKRLYRAMEVEEENLHALVQAMMQAPERAGGAMTAAGVL 149
Query: 133 CEPCQEGFFSRDKLETHNIAKHGAQP---------YQCETCRKLFLSKYSLFTHNKKHLP 183
E + + + P + ET + +F++ ++ + L
Sbjct: 150 DPASGEPGDWTPPRYFNMMFQDLRGPRGGRGLLAYLRPETAQGIFVNFKNVLDATSRKLG 209
Query: 184 IEERLHYQCELCGKSFNNKQT 204
Q GK+F N+ T
Sbjct: 210 FGI---AQ---IGKAFRNEIT 224
>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA
{Xenopus laevis [TaxId: 8355]}
Length = 30
Score = 24.2 bits (52), Expect = 2.7
Identities = 13/27 (48%), Positives = 14/27 (51%)
Query: 46 PHKCEHCEKEFENRRALKRHEKNHTQE 72
P K E CEK F + L RH HT E
Sbjct: 4 PCKEEGCEKGFTSLHHLTRHSLTHTGE 30
>d1vs5o1 a.16.1.2 (O:1-88) Ribosomal protein S15 {Escherichia coli
[TaxId: 562]}
Length = 88
Score = 25.8 bits (57), Expect = 3.0
Identities = 6/24 (25%), Positives = 14/24 (58%)
Query: 107 QCPYVAKRIKYLRYHMKKHRKEYS 130
Q + +I +L+ H +H+K++
Sbjct: 27 QVALLTAQINHLQGHFAEHKKDHH 50
Score = 24.7 bits (54), Expect = 7.1
Identities = 12/43 (27%), Positives = 17/43 (39%)
Query: 92 EHIASHVTDSEFKCDQCPYVAKRIKYLRYHMKKHRKEYSAYCE 134
H A H D + V++R K L Y +K Y+ E
Sbjct: 40 GHFAEHKKDHHSRRGLLRMVSQRRKLLDYLKRKDVARYTRLIE 82
>d1kuqa_ a.16.1.2 (A:) Ribosomal protein S15 {Thermus thermophilus
[TaxId: 274]}
Length = 84
Score = 25.0 bits (55), Expect = 4.5
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 107 QCPYVAKRIKYLRYHMKKHRKEYS 130
Q + RI L H+K H+K++
Sbjct: 25 QVALLTLRINRLSEHLKVHKKDHH 48
Score = 24.3 bits (53), Expect = 9.0
Identities = 12/43 (27%), Positives = 18/43 (41%)
Query: 92 EHIASHVTDSEFKCDQCPYVAKRIKYLRYHMKKHRKEYSAYCE 134
EH+ H D V +R + LRY ++ + Y A E
Sbjct: 38 EHLKVHKKDHHSHRGLLMMVGQRRRLLRYLQREDPERYRALIE 80
>d1a32a_ a.16.1.2 (A:) Ribosomal protein S15 {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 85
Score = 25.1 bits (55), Expect = 4.6
Identities = 12/43 (27%), Positives = 15/43 (34%)
Query: 92 EHIASHVTDSEFKCDQCPYVAKRIKYLRYHMKKHRKEYSAYCE 134
EH+ H D + V KR + L Y K Y E
Sbjct: 39 EHLRVHKKDHHSRRGLLKMVGKRRRLLAYLRNKDVARYREIVE 81
Score = 25.1 bits (55), Expect = 5.4
Identities = 6/24 (25%), Positives = 14/24 (58%)
Query: 107 QCPYVAKRIKYLRYHMKKHRKEYS 130
Q + ++I L H++ H+K++
Sbjct: 26 QIAILTEQINNLNEHLRVHKKDHH 49
>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo
sapiens) [TaxId: 9606]}
Length = 44
Score = 23.9 bits (51), Expect = 5.2
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 155 GAQPYQCETCRKLFLSKYSLFTH 177
G +PY+C C K F+ + S H
Sbjct: 2 GIKPYECNICAKRFMWRDSFHRH 24
>d1wiia_ g.41.3.4 (A:) Hypothetical UPF0222 protein MGC4549 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 85
Score = 24.7 bits (54), Expect = 6.0
Identities = 17/66 (25%), Positives = 23/66 (34%), Gaps = 13/66 (19%)
Query: 29 GEVKKRSRKSTP-----QKLDGPHKCEHC--EKEFENRRALKRHEKNHTQEKTFPCTVCL 81
G RK P L+ C C EK + + + R CTVCL
Sbjct: 1 GSSGSSGRKPPPKKKMTGTLETQFTCPFCNHEKSCDVK--MDRARNTGVIS----CTVCL 54
Query: 82 KMFKTK 87
+ F+T
Sbjct: 55 EEFQTP 60
>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA
{Xenopus laevis [TaxId: 8355]}
Length = 28
Score = 23.5 bits (50), Expect = 6.0
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 50 EHCEKEFENRRALKRHEKNHTQ 71
E+C K F+ LK H+ +HTQ
Sbjct: 7 ENCGKAFKKHNQLKVHQFSHTQ 28
>d1pzta_ c.68.1.2 (A:) beta 1,4 galactosyltransferase (b4GalT1) {Cow
(Bos taurus) [TaxId: 9913]}
Length = 271
Score = 26.1 bits (57), Expect = 7.0
Identities = 15/79 (18%), Positives = 28/79 (35%), Gaps = 12/79 (15%)
Query: 115 IKYLRYHMKKHRKEYSAY-CEPCQEGFFSRDKLETHNIAKHGAQPYQCETCRKLFLSKYS 173
+ YL +++ + +Y Y E F+R KL N+ A C
Sbjct: 68 LYYLHPILQRQQLDYGIYVINQAGESMFNRAKLL--NVGFKEALKDYDYNC--------- 116
Query: 174 LFTHNKKHLPIEERLHYQC 192
+ +P+ + Y+C
Sbjct: 117 FVFSDVDLIPMNDHNTYRC 135
>d1z60a1 g.49.1.2 (A:328-386) TFIIH p44 subunit cysteine-rich domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 59
Score = 24.0 bits (52), Expect = 7.9
Identities = 11/57 (19%), Positives = 18/57 (31%), Gaps = 13/57 (22%)
Query: 125 HRKEYSAYCEPCQEGFFSRDKLETHNIAKHGAQPYQCETCRKLFLSKYSLFTHNKKH 181
+C CQ +D+ Y C C+ +F +F H+ H
Sbjct: 10 EEYNGERFCYGCQGEL--KDQH-----------VYVCAVCQNVFCVDCDVFVHDSLH 53
>d1wewa_ g.50.1.2 (A:) Sumoylation ligase E3, SIZ1 {Thale cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 78
Score = 24.3 bits (52), Expect = 8.0
Identities = 4/37 (10%), Positives = 8/37 (21%)
Query: 159 YQCETCRKLFLSKYSLFTHNKKHLPIEERLHYQCELC 195
+ C + + CE+C
Sbjct: 33 CEDPRCHVWQHVGCVILPDKPMDGNPPLPESFYCEIC 69
>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 23.2 bits (49), Expect = 8.2
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 46 PHKCEHCEKEFENRRALKRHEKNHTQE 72
P KC C ++ AL+ HE+ H +
Sbjct: 2 PEKCSECSYSCSSKAALRIHERIHCTD 28
>d1jmab1 g.24.1.1 (B:4-59) Cellular receptor HveA {Human (Homo
sapiens) [TaxId: 9606]}
Length = 56
Score = 23.7 bits (51), Expect = 9.8
Identities = 10/39 (25%), Positives = 15/39 (38%), Gaps = 9/39 (23%)
Query: 105 CDQCPYVAKRIKYLRYHMKKHRKEYS-AYCEPCQEGFFS 142
C +C Y +K+ E + CEPC G +
Sbjct: 13 CPKCS--------PGYRVKEACGELTGTVCEPCPPGTYI 43
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.319 0.130 0.376
Gapped
Lambda K H
0.267 0.0636 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,132,278
Number of extensions: 50463
Number of successful extensions: 419
Number of sequences better than 10.0: 1
Number of HSP's gapped: 405
Number of HSP's successfully gapped: 149
Length of query: 345
Length of database: 2,407,596
Length adjustment: 86
Effective length of query: 259
Effective length of database: 1,226,816
Effective search space: 317745344
Effective search space used: 317745344
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (24.4 bits)