RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy4573
(306 letters)
>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 33
Score = 50.3 bits (121), Expect = 2e-09
Identities = 17/33 (51%), Positives = 23/33 (69%)
Query: 227 IHTGQRPYVCEICGKGFTQKQALNTHKRGHTGE 259
IH+G++PY C CGK F++ L H+R HTGE
Sbjct: 1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE 33
Score = 41.8 bits (99), Expect = 2e-06
Identities = 15/31 (48%), Positives = 19/31 (61%)
Query: 200 HTNERPAVCSYCGKGFRRGDALTEHIRIHTG 230
H+ E+P C CGK F R L +H R+HTG
Sbjct: 2 HSGEKPYGCVECGKAFSRSSILVQHQRVHTG 32
Score = 33.0 bits (76), Expect = 0.002
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 256 HTGEIPYHCEFCSERFSTKALVRHHVRSH 284
H+GE PY C C + FS +++ H R H
Sbjct: 2 HSGEKPYGCVECGKAFSRSSILVQHQRVH 30
Score = 31.8 bits (73), Expect = 0.005
Identities = 12/32 (37%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Query: 173 HLGIK-FECEVCHRKLSTKNHLRLHMRTHTNE 203
H G K + C C + S + L H R HT E
Sbjct: 2 HSGEKPYGCVECGKAFSRSSILVQHQRVHTGE 33
Score = 28.0 bits (63), Expect = 0.12
Identities = 8/22 (36%), Positives = 9/22 (40%)
Query: 46 CNVCSKRCGSKSGLKIHMKSHT 67
C C K S L H + HT
Sbjct: 10 CVECGKAFSRSSILVQHQRVHT 31
Score = 25.3 bits (56), Expect = 1.2
Identities = 9/32 (28%), Positives = 13/32 (40%)
Query: 94 HVVEGEYKCNQCDHVAKKLAYLQAHMKKHRNE 125
H E Y C +C + + L H + H E
Sbjct: 2 HSGEKPYGCVECGKAFSRSSILVQHQRVHTGE 33
>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 46.6 bits (111), Expect = 3e-08
Identities = 15/34 (44%), Positives = 20/34 (58%)
Query: 226 RIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGE 259
R HTG++PY C C K F QKQ L+ H + +
Sbjct: 1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP 34
Score = 40.4 bits (95), Expect = 5e-06
Identities = 14/33 (42%), Positives = 19/33 (57%)
Query: 198 RTHTNERPAVCSYCGKGFRRGDALTEHIRIHTG 230
RTHT E+P CS+C K FR+ L H + +
Sbjct: 1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHD 33
Score = 35.4 bits (82), Expect = 3e-04
Identities = 14/32 (43%), Positives = 18/32 (56%)
Query: 254 RGHTGEIPYHCEFCSERFSTKALVRHHVRSHH 285
R HTGE PY C C + F K L+ H + +H
Sbjct: 1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYH 32
Score = 32.3 bits (74), Expect = 0.004
Identities = 9/33 (27%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Query: 172 THLGIK-FECEVCHRKLSTKNHLRLHMRTHTNE 203
TH G K + C C + K L +H + + +
Sbjct: 2 THTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP 34
Score = 26.9 bits (60), Expect = 0.29
Identities = 9/32 (28%), Positives = 15/32 (46%)
Query: 94 HVVEGEYKCNQCDHVAKKLAYLQAHMKKHRNE 125
H E Y C+ CD ++ L H K++ +
Sbjct: 3 HTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP 34
Score = 25.8 bits (57), Expect = 0.92
Identities = 7/22 (31%), Positives = 10/22 (45%)
Query: 46 CNVCSKRCGSKSGLKIHMKSHT 67
C+ C K K L +H K +
Sbjct: 11 CSHCDKTFRQKQLLDMHFKRYH 32
>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 45.4 bits (108), Expect = 9e-08
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 226 RIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGE 259
R H+G++PY C IC FTQ + H E
Sbjct: 1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTE 34
Score = 37.7 bits (88), Expect = 5e-05
Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 198 RTHTNERPAVCSYCGKGFRRGDALTEHI-RIHTG 230
RTH+ E+P C C F + + HI + HT
Sbjct: 1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTE 34
Score = 35.3 bits (82), Expect = 3e-04
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 254 RGHTGEIPYHCEFCSERFSTKALVRHHVRSHHS 286
R H+GE PY C C RF+ ++ H+ H+
Sbjct: 1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHT 33
Score = 27.6 bits (62), Expect = 0.15
Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Query: 172 THLGIK-FECEVCHRKLSTKNHLRLH-MRTHTNE 203
TH G K +EC +CH + + +++H ++ HT
Sbjct: 2 THSGEKPYECYICHARFTQSGTMKMHILQKHTEN 35
Score = 23.8 bits (52), Expect = 4.8
Identities = 7/32 (21%), Positives = 13/32 (40%)
Query: 94 HVVEGEYKCNQCDHVAKKLAYLQAHMKKHRNE 125
H E Y+C C + ++ H+ + E
Sbjct: 3 HSGEKPYECYICHARFTQSGTMKMHILQKHTE 34
Score = 23.0 bits (50), Expect = 7.2
Identities = 5/22 (22%), Positives = 9/22 (40%)
Query: 46 CNVCSKRCGSKSGLKIHMKSHT 67
C +C R +K+H+
Sbjct: 11 CYICHARFTQSGTMKMHILQKH 32
>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 39
Score = 44.6 bits (106), Expect = 2e-07
Identities = 17/38 (44%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Query: 229 TGQRPYVCEICGKGFTQKQALNTH-KRGHTGEIPYHCE 265
+ +PY+C+ CGKGF++ LN H K+ HT E P+ C+
Sbjct: 1 SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ 38
Score = 43.4 bits (103), Expect = 5e-07
Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 203 ERPAVCSYCGKGFRRGDALTEHIR-IHTGQRPYVCEI 238
+P +C CGKGF R D L HI+ +HT +RP+ C++
Sbjct: 3 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39
Score = 30.0 bits (68), Expect = 0.026
Identities = 9/32 (28%), Positives = 13/32 (40%), Gaps = 1/32 (3%)
Query: 46 CNVCSKRCGSKSGLKIHMKS-HTLSKRYACSI 76
C C K L H+K HT + + C +
Sbjct: 8 CQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39
Score = 27.7 bits (62), Expect = 0.21
Identities = 8/30 (26%), Positives = 15/30 (50%)
Query: 257 TGEIPYHCEFCSERFSTKALVRHHVRSHHS 286
+ PY C+ C + FS + H++ H+
Sbjct: 1 SVGKPYICQSCGKGFSRPDHLNGHIKQVHT 30
>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing
protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}
Length = 38
Score = 44.4 bits (105), Expect = 2e-07
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTGE 259
+R Y C+ CGK F+ L+ H+R HTGE
Sbjct: 3 SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE 38
Score = 40.5 bits (95), Expect = 5e-06
Identities = 12/35 (34%), Positives = 14/35 (40%)
Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTG 230
R C CGK F L++H R HTG
Sbjct: 3 SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG 37
Score = 33.2 bits (76), Expect = 0.002
Identities = 8/33 (24%), Positives = 14/33 (42%)
Query: 252 HKRGHTGEIPYHCEFCSERFSTKALVRHHVRSH 284
+ Y C+ C + FS + + H R+H
Sbjct: 3 SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTH 35
Score = 28.6 bits (64), Expect = 0.076
Identities = 10/33 (30%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Query: 172 THLGIK-FECEVCHRKLSTKNHLRLHMRTHTNE 203
+ ++C+ C + S + L H RTHT E
Sbjct: 6 QQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE 38
Score = 26.7 bits (59), Expect = 0.44
Identities = 9/37 (24%), Positives = 13/37 (35%)
Query: 89 RHTLSHVVEGEYKCNQCDHVAKKLAYLQAHMKKHRNE 125
R YKC++C + L H + H E
Sbjct: 2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE 38
Score = 22.8 bits (49), Expect = 8.9
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 46 CNVCSKRCGSKSGLKIHMKSHT 67
C+ C K S L H ++HT
Sbjct: 15 CDECGKSFSHSSDLSKHRRTHT 36
>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 37
Score = 43.2 bits (102), Expect = 6e-07
Identities = 10/35 (28%), Positives = 17/35 (48%)
Query: 224 HIRIHTGQRPYVCEICGKGFTQKQALNTHKRGHTG 258
R TG +P+ C C + F++ L H++ H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML 36
Score = 40.5 bits (95), Expect = 5e-06
Identities = 11/35 (31%), Positives = 14/35 (40%)
Query: 196 HMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTG 230
R T +P C C + F R D L H + H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML 36
Score = 34.3 bits (79), Expect = 7e-04
Identities = 11/33 (33%), Positives = 14/33 (42%)
Query: 252 HKRGHTGEIPYHCEFCSERFSTKALVRHHVRSH 284
RG TG P+ C C FS + H + H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 27.8 bits (62), Expect = 0.16
Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Query: 172 THLGIK-FECEVCHRKLSTKNHLRLHMRTHTN 202
GIK F+C C R S +HL LH + H
Sbjct: 5 GSTGIKPFQCPDCDRSFSRSDHLALHRKRHML 36
Score = 25.5 bits (56), Expect = 1.1
Identities = 8/33 (24%), Positives = 13/33 (39%)
Query: 90 HTLSHVVEGEYKCNQCDHVAKKLAYLQAHMKKH 122
T ++C CD + +L H K+H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 23.5 bits (51), Expect = 4.8
Identities = 7/23 (30%), Positives = 9/23 (39%)
Query: 46 CNVCSKRCGSKSGLKIHMKSHTL 68
C C + L +H K H L
Sbjct: 14 CPDCDRSFSRSDHLALHRKRHML 36
>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 35
Score = 42.1 bits (99), Expect = 2e-06
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 228 HTGQRPYVCEICGKGFTQKQALNTHKRGHTGEI 260
+G+RP+VC IC FT K H + HT +
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTL 34
Score = 36.3 bits (84), Expect = 2e-04
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 200 HTNERPAVCSYCGKGFRRGDALTEHIRIHTG 230
+ +RP VC C F H+++HT
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVHTD 32
Score = 33.6 bits (77), Expect = 0.001
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 255 GHTGEIPYHCEFCSERFSTKALVRHHVRSHHSS 287
G +G+ P+ C C F+TKA H++ H +
Sbjct: 1 GSSGKRPFVCRICLSAFTTKANCARHLKVHTDT 33
Score = 29.7 bits (67), Expect = 0.031
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 178 FECEVCHRKLSTKNHLRLHMRTHTNE 203
F C +C +TK + H++ HT+
Sbjct: 8 FVCRICLSAFTTKANCARHLKVHTDT 33
Score = 23.6 bits (51), Expect = 4.7
Identities = 7/22 (31%), Positives = 11/22 (50%)
Query: 46 CNVCSKRCGSKSGLKIHMKSHT 67
C +C +K+ H+K HT
Sbjct: 10 CRICLSAFTTKANCARHLKVHT 31
>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 41.2 bits (97), Expect = 3e-06
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Query: 234 YVCE--ICGKGFTQKQALNTHKRGHTGEIPYHCEF 266
+ C CGK F K+ L H + H+ Y CEF
Sbjct: 2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF 36
Score = 40.5 bits (95), Expect = 5e-06
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 208 CSYCGKGFRRGDALTEHIRIHTGQRPYVCE 237
CGK F L EH+++H+ R Y+CE
Sbjct: 6 EPACGKSFNFKKHLKEHMKLHSDTRDYICE 35
Score = 33.5 bits (77), Expect = 0.001
Identities = 9/32 (28%), Positives = 17/32 (53%)
Query: 179 ECEVCHRKLSTKNHLRLHMRTHTNERPAVCSY 210
C + + K HL+ HM+ H++ R +C +
Sbjct: 5 PEPACGKSFNFKKHLKEHMKLHSDTRDYICEF 36
Score = 27.0 bits (60), Expect = 0.29
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 46 CNVCSKRCGSKSGLKIHMKSHTLSKRYAC 74
C K K LK HMK H+ ++ Y C
Sbjct: 6 EPACGKSFNFKKHLKEHMKLHSDTRDYIC 34
>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo
sapiens) [TaxId: 9606]}
Length = 53
Score = 41.2 bits (96), Expect = 4e-06
Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Query: 203 ERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEICGKGFTQKQALNTHKRGH 256
++ C CGK F H+ +H G RPY C +CGK F K L H + H
Sbjct: 1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53
Score = 40.4 bits (94), Expect = 8e-06
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 232 RPYVCEICGKGFTQKQALNTHKRGHTGEIPYHCEFCSERFSTKALVRHHVRSH 284
+ Y C+ CGK FT K + H H G PY C C ++F K + H++ H
Sbjct: 2 KLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53
Score = 38.5 bits (89), Expect = 3e-05
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 178 FECEVCHRKLSTKNHLRLHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIH 228
+ C+ C + + K+ HM H RP C CGK F+ L H++IH
Sbjct: 4 YPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53
Score = 30.4 bits (68), Expect = 0.029
Identities = 13/51 (25%), Positives = 21/51 (41%), Gaps = 5/51 (9%)
Query: 155 PFECE-----SCKKIFTYHKNTTHLGIKFECEVCHRKLSTKNHLRLHMRTH 200
+ C+ + K H + + C VC +K K+HL HM+ H
Sbjct: 3 LYPCQCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53
Score = 25.4 bits (55), Expect = 2.0
Identities = 12/47 (25%), Positives = 15/47 (31%), Gaps = 1/47 (2%)
Query: 100 YKCNQCDHVAKKLAYLQAHMKKHRNEYTAYCDLCQEGFFRKAKYETH 146
Y C QC + HM H C +C + F K H
Sbjct: 4 YPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGH 49
Score = 24.6 bits (53), Expect = 2.8
Identities = 13/46 (28%), Positives = 16/46 (34%)
Query: 49 CSKRCGSKSGLKIHMKSHTLSKRYACSICLAEFHTLTEKDRHTLSH 94
C K KS HM H + Y C +C +F H H
Sbjct: 8 CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53
Score = 24.6 bits (53), Expect = 3.1
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Query: 70 KRYACSICLAEFHTLTEKDRHTLSHVVEGEYKCNQCDHVAKKLAYLQAHMKKH 122
K Y C C F +++DRH H+ Y C C K +L HMK H
Sbjct: 2 KLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53
Score = 23.5 bits (50), Expect = 9.6
Identities = 10/21 (47%), Positives = 11/21 (52%)
Query: 46 CNVCSKRCGSKSGLKIHMKSH 66
C VC K+ K L HMK H
Sbjct: 33 CGVCGKKFKMKHHLVGHMKIH 53
>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on
Saccharomyces cerevisiae sequence}
Length = 29
Score = 40.3 bits (95), Expect = 4e-06
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 232 RPYVCEICGKGFTQKQALNTHKRGHTGE 259
R +VCE+C + F +++ L H R HT E
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNE 28
Score = 37.2 bits (87), Expect = 6e-05
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 204 RPAVCSYCGKGFRRGDALTEHIRIHTGQR 232
R VC C + F R + L H R HT ++
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 33.0 bits (76), Expect = 0.002
Identities = 14/27 (51%), Positives = 19/27 (70%)
Query: 178 FECEVCHRKLSTKNHLRLHMRTHTNER 204
F CEVC R + + HL+ H R+HTNE+
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 27.6 bits (62), Expect = 0.14
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 46 CNVCSKRCGSKSGLKIHMKSHT 67
C VC++ + LK H +SHT
Sbjct: 5 CEVCTRAFARQEHLKRHYRSHT 26
Score = 25.3 bits (56), Expect = 1.2
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 261 PYHCEFCSERFSTKALVRHHVRSH 284
+ CE C+ F+ + ++ H RSH
Sbjct: 2 SFVCEVCTRAFARQEHLKRHYRSH 25
Score = 23.4 bits (51), Expect = 4.5
Identities = 7/26 (26%), Positives = 12/26 (46%)
Query: 100 YKCNQCDHVAKKLAYLQAHMKKHRNE 125
+ C C + +L+ H + H NE
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTNE 28
>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 28
Score = 38.7 bits (91), Expect = 2e-05
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 231 QRPYVCEICGKGFTQKQALNTHKRGHTG 258
Q+P+ C IC + F++ L TH R HTG
Sbjct: 1 QKPFQCRICMRNFSRSDHLTTHIRTHTG 28
Score = 38.0 bits (89), Expect = 4e-05
Identities = 14/28 (50%), Positives = 17/28 (60%)
Query: 203 ERPAVCSYCGKGFRRGDALTEHIRIHTG 230
++P C C + F R D LT HIR HTG
Sbjct: 1 QKPFQCRICMRNFSRSDHLTTHIRTHTG 28
Score = 29.5 bits (67), Expect = 0.028
Identities = 12/24 (50%), Positives = 16/24 (66%)
Query: 178 FECEVCHRKLSTKNHLRLHMRTHT 201
F+C +C R S +HL H+RTHT
Sbjct: 4 FQCRICMRNFSRSDHLTTHIRTHT 27
Score = 27.2 bits (61), Expect = 0.22
Identities = 6/22 (27%), Positives = 11/22 (50%)
Query: 46 CNVCSKRCGSKSGLKIHMKSHT 67
C +C + L H+++HT
Sbjct: 6 CRICMRNFSRSDHLTTHIRTHT 27
Score = 24.9 bits (55), Expect = 1.6
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 259 EIPYHCEFCSERFSTKALVRHHVRSH 284
+ P+ C C FS + H+R+H
Sbjct: 1 QKPFQCRICMRNFSRSDHLTTHIRTH 26
Score = 23.0 bits (50), Expect = 7.4
Identities = 5/23 (21%), Positives = 11/23 (47%)
Query: 100 YKCNQCDHVAKKLAYLQAHMKKH 122
++C C + +L H++ H
Sbjct: 4 FQCRICMRNFSRSDHLTTHIRTH 26
>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 29
Score = 37.3 bits (87), Expect = 6e-05
Identities = 7/28 (25%), Positives = 13/28 (46%)
Query: 232 RPYVCEICGKGFTQKQALNTHKRGHTGE 259
+ + C C K F + L+ H + H +
Sbjct: 1 KKFACPECPKRFMRSDHLSKHIKTHQNK 28
Score = 33.5 bits (77), Expect = 0.001
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 204 RPAVCSYCGKGFRRGDALTEHIRIHTGQR 232
+ C C K F R D L++HI+ H ++
Sbjct: 1 KKFACPECPKRFMRSDHLSKHIKTHQNKK 29
Score = 32.3 bits (74), Expect = 0.003
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 178 FECEVCHRKLSTKNHLRLHMRTHTNER 204
F C C ++ +HL H++TH N++
Sbjct: 3 FACPECPKRFMRSDHLSKHIKTHQNKK 29
Score = 27.3 bits (61), Expect = 0.18
Identities = 8/22 (36%), Positives = 10/22 (45%)
Query: 46 CNVCSKRCGSKSGLKIHMKSHT 67
C C KR L H+K+H
Sbjct: 5 CPECPKRFMRSDHLSKHIKTHQ 26
Score = 24.2 bits (53), Expect = 2.3
Identities = 6/24 (25%), Positives = 12/24 (50%)
Query: 261 PYHCEFCSERFSTKALVRHHVRSH 284
+ C C +RF + H+++H
Sbjct: 2 KFACPECPKRFMRSDHLSKHIKTH 25
Score = 23.8 bits (52), Expect = 3.5
Identities = 7/26 (26%), Positives = 14/26 (53%)
Query: 100 YKCNQCDHVAKKLAYLQAHMKKHRNE 125
+ C +C + +L H+K H+N+
Sbjct: 3 FACPECPKRFMRSDHLSKHIKTHQNK 28
>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 30
Score = 36.5 bits (85), Expect = 1e-04
Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Query: 232 RPYVC--EICGKGFTQKQALNTHKRGHTGE 259
+P+ C E C K +++ + L TH R HTGE
Sbjct: 1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE 30
Score = 32.7 bits (75), Expect = 0.002
Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Query: 204 RPAVCSY--CGKGFRRGDALTEHIRIHTGQ 231
+P C++ C K + R + L H+R HTG+
Sbjct: 1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE 30
Score = 26.1 bits (58), Expect = 0.52
Identities = 10/28 (35%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Query: 178 FEC--EVCHRKLSTKNHLRLHMRTHTNE 203
+C E C + S +L+ H+R+HT E
Sbjct: 3 HKCTFEGCRKSYSRLENLKTHLRSHTGE 30
Score = 23.1 bits (50), Expect = 6.9
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 49 CSKRCGSKSGLKIHMKSHT 67
C K LK H++SHT
Sbjct: 10 CRKSYSRLENLKTHLRSHT 28
>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 31
Score = 35.8 bits (83), Expect = 2e-04
Identities = 16/30 (53%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Query: 232 RPYVC--EICGKGFTQKQALNTHKRGHTGE 259
RP++C CGK FT+ L HKR HTGE
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGE 30
Score = 33.1 bits (76), Expect = 0.002
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Query: 204 RPAVCSY--CGKGFRRGDALTEHIRIHTGQR 232
RP +C++ CGK F R D L H R HTG++
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 27.3 bits (61), Expect = 0.22
Identities = 10/29 (34%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Query: 178 FECEV--CHRKLSTKNHLRLHMRTHTNER 204
F C C ++ + + L+ H RTHT E+
Sbjct: 3 FMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 23.0 bits (50), Expect = 6.1
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 49 CSKRCGSKSGLKIHMKSHT 67
C KR L+ H ++HT
Sbjct: 10 CGKRFTRSDELQRHKRTHT 28
>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 26
Score = 35.3 bits (82), Expect = 3e-04
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 232 RPYVCEICGKGFTQKQALNTHKRGHT 257
+PY C CGK F+Q L H+R HT
Sbjct: 1 KPYKCLECGKAFSQNSGLINHQRIHT 26
Score = 32.2 bits (74), Expect = 0.003
Identities = 12/26 (46%), Positives = 14/26 (53%)
Query: 204 RPAVCSYCGKGFRRGDALTEHIRIHT 229
+P C CGK F + L H RIHT
Sbjct: 1 KPYKCLECGKAFSQNSGLINHQRIHT 26
Score = 25.6 bits (57), Expect = 0.75
Identities = 8/24 (33%), Positives = 12/24 (50%)
Query: 178 FECEVCHRKLSTKNHLRLHMRTHT 201
++C C + S + L H R HT
Sbjct: 3 YKCLECGKAFSQNSGLINHQRIHT 26
Score = 23.3 bits (51), Expect = 4.4
Identities = 9/22 (40%), Positives = 10/22 (45%)
Query: 46 CNVCSKRCGSKSGLKIHMKSHT 67
C C K SGL H + HT
Sbjct: 5 CLECGKAFSQNSGLINHQRIHT 26
>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 30
Score = 34.7 bits (80), Expect = 5e-04
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Query: 232 RPYVCEI--CGKGFTQKQALNTHKRGHTGE 259
+P+ C CGK F+ L TH R HTG+
Sbjct: 1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 30
Score = 30.8 bits (70), Expect = 0.011
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Query: 204 RPAVCSY--CGKGFRRGDALTEHIRIHTGQ 231
+P C++ CGK F L H+RIHTG
Sbjct: 1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 30
Score = 23.5 bits (51), Expect = 5.3
Identities = 10/28 (35%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Query: 178 FECEV--CHRKLSTKNHLRLHMRTHTNE 203
F+C C ++ S +LR H+R HT +
Sbjct: 3 FQCTFEGCGKRFSLDFNLRTHVRIHTGD 30
>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 32
Score = 33.5 bits (77), Expect = 0.001
Identities = 10/31 (32%), Positives = 14/31 (45%), Gaps = 2/31 (6%)
Query: 203 ERPAVCSY--CGKGFRRGDALTEHIRIHTGQ 231
+RP C + C K F R L H + H +
Sbjct: 1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK 31
Score = 32.7 bits (75), Expect = 0.003
Identities = 11/30 (36%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
Query: 232 RPYVC--EICGKGFTQKQALNTHKRGHTGE 259
RPY C C K F + L HK+ H +
Sbjct: 2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK 31
Score = 25.0 bits (55), Expect = 1.5
Identities = 5/28 (17%), Positives = 12/28 (42%), Gaps = 2/28 (7%)
Query: 178 FECEV--CHRKLSTKNHLRLHMRTHTNE 203
+ C+ C + + L H ++H +
Sbjct: 4 YSCDHPGCDKAFVRNHDLIRHKKSHQEK 31
>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 29
Score = 33.4 bits (77), Expect = 0.002
Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Query: 232 RPYVC--EICGKGFTQKQALNTHKRGHTG 258
RPY C E C + F++ L H R HTG
Sbjct: 1 RPYACPVESCDRRFSRSADLTRHIRIHTG 29
Score = 33.1 bits (76), Expect = 0.002
Identities = 15/29 (51%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Query: 204 RPAVCSY--CGKGFRRGDALTEHIRIHTG 230
RP C C + F R LT HIRIHTG
Sbjct: 1 RPYACPVESCDRRFSRSADLTRHIRIHTG 29
Score = 23.8 bits (52), Expect = 3.1
Identities = 10/26 (38%), Positives = 13/26 (50%), Gaps = 2/26 (7%)
Query: 178 FEC--EVCHRKLSTKNHLRLHMRTHT 201
+ C E C R+ S L H+R HT
Sbjct: 3 YACPVESCDRRFSRSADLTRHIRIHT 28
>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 47
Score = 33.0 bits (75), Expect = 0.003
Identities = 5/39 (12%), Positives = 14/39 (35%), Gaps = 2/39 (5%)
Query: 223 EHIRIHTGQRPYVCEICGKG--FTQKQALNTHKRGHTGE 259
+ + + C G F ++ + +H + H +
Sbjct: 8 DKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED 46
Score = 32.6 bits (74), Expect = 0.004
Identities = 8/45 (17%), Positives = 19/45 (42%), Gaps = 3/45 (6%)
Query: 190 KNHLRLHMRTHTNERPAVCSYCGKG--FRRGDALTEHIRIHTGQR 232
+ + +++ ++ C + G F+R + HI+ H R
Sbjct: 4 RGSIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47
Score = 24.9 bits (54), Expect = 2.3
Identities = 6/28 (21%), Positives = 14/28 (50%)
Query: 177 KFECEVCHRKLSTKNHLRLHMRTHTNER 204
+ C + + ++R H++TH +R
Sbjct: 20 ECLFPGCTKTFKRRYNIRSHIQTHLEDR 47
Score = 24.1 bits (52), Expect = 4.2
Identities = 6/35 (17%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Query: 252 HKRGHTGEIPYHCEFC--SERFSTKALVRHHVRSH 284
+ + C F ++ F + +R H+++H
Sbjct: 9 KYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTH 43
>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 37
Score = 30.5 bits (69), Expect = 0.019
Identities = 10/29 (34%), Positives = 12/29 (41%)
Query: 231 QRPYVCEICGKGFTQKQALNTHKRGHTGE 259
R Y C C + F QAL H H +
Sbjct: 3 PRSYTCSFCKREFRSAQALGGHMNVHRRD 31
Score = 27.8 bits (62), Expect = 0.16
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 207 VCSYCGKGFRRGDALTEHIRIHTGQR 232
CS+C + FR AL H+ +H R
Sbjct: 7 TCSFCKREFRSAQALGGHMNVHRRDR 32
Score = 27.0 bits (60), Expect = 0.31
Identities = 8/28 (28%), Positives = 12/28 (42%)
Query: 177 KFECEVCHRKLSTKNHLRLHMRTHTNER 204
+ C C R+ + L HM H +R
Sbjct: 5 SYTCSFCKREFRSAQALGGHMNVHRRDR 32
>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 35
Score = 30.0 bits (67), Expect = 0.028
Identities = 16/32 (50%), Positives = 19/32 (59%)
Query: 231 QRPYVCEICGKGFTQKQALNTHKRGHTGEIPY 262
++ CEICGK F LN HK H+GE PY
Sbjct: 3 RKQVACEICGKIFRDVYHLNRHKLSHSGEKPY 34
Score = 23.9 bits (51), Expect = 3.6
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 208 CSYCGKGFRRGDALTEHIRIHTGQRPY 234
C CGK FR L H H+G++PY
Sbjct: 8 CEICGKIFRDVYHLNRHKLSHSGEKPY 34
>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 29.2 bits (66), Expect = 0.039
Identities = 12/28 (42%), Positives = 13/28 (46%), Gaps = 2/28 (7%)
Query: 232 RPYVCEI--CGKGFTQKQALNTHKRGHT 257
RPYVC C K F Q L +H H
Sbjct: 1 RPYVCPFDGCNKKFAQSTNLKSHILTHA 28
Score = 29.2 bits (66), Expect = 0.046
Identities = 11/28 (39%), Positives = 13/28 (46%), Gaps = 2/28 (7%)
Query: 204 RPAVCSY--CGKGFRRGDALTEHIRIHT 229
RP VC + C K F + L HI H
Sbjct: 1 RPYVCPFDGCNKKFAQSTNLKSHILTHA 28
Score = 24.6 bits (54), Expect = 2.1
Identities = 7/26 (26%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
Query: 178 FECEV--CHRKLSTKNHLRLHMRTHT 201
+ C C++K + +L+ H+ TH
Sbjct: 3 YVCPFDGCNKKFAQSTNLKSHILTHA 28
>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 26
Score = 28.5 bits (63), Expect = 0.079
Identities = 15/26 (57%), Positives = 19/26 (73%)
Query: 233 PYVCEICGKGFTQKQALNTHKRGHTG 258
P+ CE+CGK F++K L TH R HTG
Sbjct: 1 PHKCEVCGKCFSRKDKLKTHMRCHTG 26
Score = 26.2 bits (57), Expect = 0.44
Identities = 14/26 (53%), Positives = 15/26 (57%)
Query: 205 PAVCSYCGKGFRRGDALTEHIRIHTG 230
P C CGK F R D L H+R HTG
Sbjct: 1 PHKCEVCGKCFSRKDKLKTHMRCHTG 26
Score = 24.6 bits (53), Expect = 1.7
Identities = 12/23 (52%), Positives = 16/23 (69%)
Query: 179 ECEVCHRKLSTKNHLRLHMRTHT 201
+CEVC + S K+ L+ HMR HT
Sbjct: 3 KCEVCGKCFSRKDKLKTHMRCHT 25
Score = 23.1 bits (49), Expect = 6.4
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 261 PYHCEFCSERFSTKALVRHHVRSH 284
P+ CE C + FS K ++ H+R H
Sbjct: 1 PHKCEVCGKCFSRKDKLKTHMRCH 24
>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 32
Score = 28.1 bits (62), Expect = 0.11
Identities = 14/29 (48%), Positives = 16/29 (55%)
Query: 259 EIPYHCEFCSERFSTKALVRHHVRSHHSS 287
E PY C C RF K + +HVRSH S
Sbjct: 1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS 29
Score = 26.5 bits (58), Expect = 0.39
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 203 ERPAVCSYCGKGFRRGDALTEHIRIHTG 230
E+P C CG F+R D ++ H+R H G
Sbjct: 1 EKPYSCPVCGLRFKRKDRMSYHVRSHDG 28
Score = 25.8 bits (56), Expect = 0.90
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 231 QRPYVCEICGKGFTQKQALNTHKRGHTGEI 260
++PY C +CG F +K ++ H R H G +
Sbjct: 1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGSV 30
Score = 23.1 bits (49), Expect = 7.3
Identities = 7/23 (30%), Positives = 13/23 (56%)
Query: 178 FECEVCHRKLSTKNHLRLHMRTH 200
+ C VC + K+ + H+R+H
Sbjct: 4 YSCPVCGLRFKRKDRMSYHVRSH 26
>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 28
Score = 27.1 bits (60), Expect = 0.23
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 203 ERPAVCSYCGKGFRRGDALTEHIRIH 228
E+P C CG+ F R D H +IH
Sbjct: 1 EKPFACDICGRKFARSDERKRHTKIH 26
Score = 24.4 bits (53), Expect = 2.3
Identities = 8/26 (30%), Positives = 15/26 (57%)
Query: 231 QRPYVCEICGKGFTQKQALNTHKRGH 256
++P+ C+ICG+ F + H + H
Sbjct: 1 EKPFACDICGRKFARSDERKRHTKIH 26
>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo
sapiens) [TaxId: 9606]}
Length = 28
Score = 26.4 bits (58), Expect = 0.43
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 207 VCSYCGKGFRRGDALTEHIRIHTGQR 232
+C CG ++ L +HIR HT R
Sbjct: 3 ICEECGIRAKKPSMLKKHIRTHTDVR 28
Score = 24.8 bits (54), Expect = 1.6
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 177 KFECEVCHRKLSTKNHLRLHMRTHTNER 204
K+ CE C + + L+ H+RTHT+ R
Sbjct: 1 KYICEECGIRAKKPSMLKKHIRTHTDVR 28
Score = 23.3 bits (50), Expect = 5.6
Identities = 10/26 (38%), Positives = 12/26 (46%)
Query: 234 YVCEICGKGFTQKQALNTHKRGHTGE 259
Y+CE CG + L H R HT
Sbjct: 2 YICEECGIRAKKPSMLKKHIRTHTDV 27
Score = 22.9 bits (49), Expect = 9.0
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 46 CNVCSKRCGSKSGLKIHMKSHT 67
C C R S LK H+++HT
Sbjct: 4 CEECGIRAKKPSMLKKHIRTHT 25
>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 25.7 bits (56), Expect = 0.66
Identities = 13/28 (46%), Positives = 16/28 (57%)
Query: 232 RPYVCEICGKGFTQKQALNTHKRGHTGE 259
R +VC CGK F + L H+ HTGE
Sbjct: 1 RVHVCAECGKAFVESSKLKRHQLVHTGE 28
Score = 25.0 bits (54), Expect = 1.7
Identities = 12/28 (42%), Positives = 15/28 (53%)
Query: 204 RPAVCSYCGKGFRRGDALTEHIRIHTGQ 231
R VC+ CGK F L H +HTG+
Sbjct: 1 RVHVCAECGKAFVESSKLKRHQLVHTGE 28
>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 27
Score = 25.8 bits (56), Expect = 0.75
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 179 ECEVCHRKLSTKNHLRLHMRTHTNER 204
EC CH+K +K +L++H R HT E+
Sbjct: 2 ECPTCHKKFLSKYYLKVHNRKHTGEK 27
Score = 23.1 bits (49), Expect = 6.0
Identities = 12/24 (50%), Positives = 12/24 (50%)
Query: 236 CEICGKGFTQKQALNTHKRGHTGE 259
C C K F K L H R HTGE
Sbjct: 3 CPTCHKKFLSKYYLKVHNRKHTGE 26
>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 30
Score = 25.5 bits (55), Expect = 1.1
Identities = 12/26 (46%), Positives = 14/26 (53%)
Query: 178 FECEVCHRKLSTKNHLRLHMRTHTNE 203
F C VC + LRLHM +HT E
Sbjct: 5 FTCSVCQETFRRRMELRLHMVSHTGE 30
>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on
Saccharomyces cerevisiae sequence}
Length = 31
Score = 25.2 bits (55), Expect = 1.2
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 261 PYHCEFCSERFSTKALVRHHVRSHHS 286
PY C C+ F+ + L+ H + HS
Sbjct: 1 PYPCGLCNRAFTRRDLLIRHAQKIHS 26
>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 29
Score = 25.0 bits (54), Expect = 1.2
Identities = 13/28 (46%), Positives = 14/28 (50%)
Query: 203 ERPAVCSYCGKGFRRGDALTEHIRIHTG 230
ERP C C R LT H+R HTG
Sbjct: 1 ERPFKCQICPYASRNSSQLTVHLRSHTG 28
Score = 24.6 bits (53), Expect = 2.1
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 231 QRPYVCEICGKGFTQKQALNTHKRGHTGE 259
+RP+ C+IC L H R HTG+
Sbjct: 1 ERPFKCQICPYASRNSSQLTVHLRSHTGD 29
>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo
sapiens) [TaxId: 9606]}
Length = 44
Score = 25.1 bits (54), Expect = 1.6
Identities = 11/36 (30%), Positives = 16/36 (44%), Gaps = 5/36 (13%)
Query: 229 TGQRPYVCEICGKGFTQKQALNTH-----KRGHTGE 259
TG +PY C IC K F + + + H K +
Sbjct: 1 TGIKPYECNICAKRFMWRDSFHRHVTSCTKSYEAAK 36
>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 53
Score = 24.6 bits (53), Expect = 3.0
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 234 YVCEICGKGFTQKQALNTHKRGH 256
C +CGK FT L H+ H
Sbjct: 7 LPCGLCGKVFTDANRLRQHEAQH 29
>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA
{Xenopus laevis [TaxId: 8355]}
Length = 30
Score = 23.9 bits (51), Expect = 3.5
Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Query: 232 RPYVC--EICGKGFTQKQALNTHKRGHTGE 259
+P+ C E C KGFT L H HTGE
Sbjct: 1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE 30
>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 33
Score = 23.9 bits (52), Expect = 3.7
Identities = 9/24 (37%), Positives = 11/24 (45%)
Query: 236 CEICGKGFTQKQALNTHKRGHTGE 259
C + F + L H R HTGE
Sbjct: 10 CSRELRPFKAQYMLVVHMRRHTGE 33
Score = 23.5 bits (51), Expect = 5.3
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 208 CSYCGKGFRRGDALTEHIRIHTGQ 231
CS + F+ L H+R HTG+
Sbjct: 10 CSRELRPFKAQYMLVVHMRRHTGE 33
>d1feca1 c.3.1.5 (A:1-169,A:287-357) Trypanothione reductase
{Crithidia fasciculata [TaxId: 5656]}
Length = 240
Score = 26.5 bits (57), Expect = 3.8
Identities = 20/172 (11%), Positives = 40/172 (23%), Gaps = 22/172 (12%)
Query: 72 YACSICLAEFH----TLTEKDRHTLSHVVEGEYKCNQCDHVAKKLAYLQAHMKKHRNEYT 127
A H + + +H K + +
Sbjct: 16 LEAGWNAASLHKKRVAVIDLQKHHGPPHYAALGGTCVNVGCVPKKLMVTGANYMDTIRES 75
Query: 128 AYCDLCQEGFFRKAKYETHNIQKHNAPPFECESCKKIFTYHKNTTHLGIKFECEVCHRKL 187
A + + ++ K+ A +S + +F + T + H L
Sbjct: 76 AGFGWELDRESVRPNWKALIAAKNKAVSGINDSYEGMFADTEGLTFHQGFGALQDNHTVL 135
Query: 188 STKNHLRLHMRTHTNERPAVCSYCGKGFRRGDALTEHIRIHTGQRPYVCEIC 239
++ T + TE+I + TG P I
Sbjct: 136 VRESADPNSAVLETLD------------------TEYILLATGSWPQHLGIE 169
>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2
{Human (Homo sapiens) [TaxId: 9606]}
Length = 38
Score = 24.1 bits (52), Expect = 3.9
Identities = 10/29 (34%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
Query: 231 QRPYVCEI--CGKGFTQKQALNTHKRGHT 257
+P++C CG+ FT + L HK H
Sbjct: 4 DKPFLCTAPGCGQRFTNEDHLAVHKHKHE 32
>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 37
Score = 23.5 bits (50), Expect = 5.1
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 234 YVCEICGKGFTQKQALNTHKRGHTG 258
+VC CGK FT++ + H G
Sbjct: 5 FVCSKCGKTFTRRNTMARHADNCAG 29
>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 67
Score = 23.9 bits (52), Expect = 7.2
Identities = 7/22 (31%), Positives = 9/22 (40%)
Query: 234 YVCEICGKGFTQKQALNTHKRG 255
+ C C + F L TH R
Sbjct: 16 HRCLACARYFIDSTNLKTHFRS 37
>d1wira_ g.37.1.5 (A:) Protein arginine N-methyltransferase 3 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 121
Score = 24.8 bits (54), Expect = 7.5
Identities = 6/27 (22%), Positives = 9/27 (33%)
Query: 259 EIPYHCEFCSERFSTKALVRHHVRSHH 285
C FC F++ H + H
Sbjct: 13 RQHTPCLFCDRLFASAEETFSHCKLEH 39
>d2c1ha1 c.1.10.3 (A:10-328) 5-aminolaevulinate dehydratase, ALAD
(porphobilinogen synthase) {Prosthecochloris
vibrioformis [TaxId: 1098]}
Length = 319
Score = 25.7 bits (56), Expect = 8.8
Identities = 23/164 (14%), Positives = 42/164 (25%), Gaps = 16/164 (9%)
Query: 89 RHTLSHVVEGEYKCNQCDHVAKKLAYLQAHMKKHRNEYTAYCDLCQEGFFRKAKYETHNI 148
R T+ VE + D + + +K + AY D G ++A
Sbjct: 51 RFTIDRAVEECKEL--YDLGIQGIDLFGIPEQKTEDGSEAYND---NGILQQAIRAIK-- 103
Query: 149 QKHNAPPFECESCKKIFTYHKNTTHLGIKFECEVCHRKLSTKNHLRLHMRTHTNERPAVC 208
+ + FT + + + T L+ +H
Sbjct: 104 KAVPELCIMTDVALDPFTPFGHDGLV-----KDGIILNDETVEVLQKMAVSHAEAGADFV 158
Query: 209 SYCGKGFRR----GDALTEHIRIHTGQRPYVCEICGKGFTQKQA 248
S R +AL E G Y + + +
Sbjct: 159 SPSDMMDGRIGAIREALDETDHSDVGILSYAAKYASSFYGPFRD 202
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.323 0.134 0.431
Gapped
Lambda K H
0.267 0.0611 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,145,342
Number of extensions: 55051
Number of successful extensions: 687
Number of sequences better than 10.0: 1
Number of HSP's gapped: 669
Number of HSP's successfully gapped: 266
Length of query: 306
Length of database: 2,407,596
Length adjustment: 85
Effective length of query: 221
Effective length of database: 1,240,546
Effective search space: 274160666
Effective search space used: 274160666
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 53 (24.4 bits)