Your job contains 1 sequence.
>psy4577
VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW
NPNEPWVICSVSEDNIMQILSVVCVEPFDDAVEERVINEEYKIWKKNTPFLYDLVMTHAL
EWPSLTAQWLPDVTRVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD
YSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIK
INHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEG
YGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVELELIERLTK
KADPVCTLEKAKKKKEVVVTMFAL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy4577
(384 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|F2Z4M0 - symbol:RBBP4 "Histone-binding protein ... 1108 2.9e-112 1
UNIPROTKB|Q9W7I5 - symbol:RBBP4 "Histone-binding protein ... 1108 2.9e-112 1
UNIPROTKB|Q3MHL3 - symbol:RBBP4 "Histone-binding protein ... 1108 2.9e-112 1
UNIPROTKB|E2QXR8 - symbol:RBBP4 "Uncharacterized protein"... 1108 2.9e-112 1
UNIPROTKB|Q09028 - symbol:RBBP4 "Histone-binding protein ... 1108 2.9e-112 1
MGI|MGI:1194912 - symbol:Rbbp4 "retinoblastoma binding pr... 1108 2.9e-112 1
RGD|1593768 - symbol:Rbbp4 "retinoblastoma binding protei... 1108 2.9e-112 1
UNIPROTKB|Q5RF92 - symbol:RBBP4 "Histone-binding protein ... 1103 9.7e-112 1
UNIPROTKB|Q5M7K4 - symbol:rbbp4 "Histone-binding protein ... 1101 1.6e-111 1
FB|FBgn0263979 - symbol:Caf1 "Chromatin assembly factor 1... 1097 4.2e-111 1
UNIPROTKB|Q6INH0 - symbol:rbbp4-b "Histone-binding protei... 1096 5.3e-111 1
ZFIN|ZDB-GENE-030131-445 - symbol:rbb4 "retinoblastoma bi... 1092 1.4e-110 1
UNIPROTKB|O93377 - symbol:rbbp4-a "Histone-binding protei... 1076 7.0e-109 1
ZFIN|ZDB-GENE-030131-848 - symbol:rbb4l "retinoblastoma b... 1060 3.5e-107 1
UNIPROTKB|Q8AVH1 - symbol:rbbp7 "Histone-binding protein ... 1055 1.2e-106 1
RGD|1563620 - symbol:RGD1563620 "similar to retinoblastom... 1054 1.5e-106 1
UNIPROTKB|Q6P315 - symbol:rbbp7 "Histone-binding protein ... 1054 1.5e-106 1
UNIPROTKB|Q16576 - symbol:RBBP7 "Histone-binding protein ... 1028 8.6e-104 1
UNIPROTKB|Q4R304 - symbol:RBBP7 "Histone-binding protein ... 1028 8.6e-104 1
MGI|MGI:1194910 - symbol:Rbbp7 "retinoblastoma binding pr... 1028 8.6e-104 1
RGD|620125 - symbol:Rbbp7 "retinoblastoma binding protein... 1028 8.6e-104 1
UNIPROTKB|Q3SWX8 - symbol:RBBP7 "Histone-binding protein ... 1024 2.3e-103 1
UNIPROTKB|E2RM49 - symbol:RBBP7 "Uncharacterized protein"... 1024 2.3e-103 1
UNIPROTKB|F1SQR0 - symbol:LOC100519001 "Uncharacterized p... 1024 2.3e-103 1
UNIPROTKB|E2RM67 - symbol:RBBP7 "Uncharacterized protein"... 1024 2.3e-103 1
UNIPROTKB|I3LV46 - symbol:LOC100519001 "Uncharacterized p... 1024 2.3e-103 1
UNIPROTKB|Q5R654 - symbol:RBBP7 "Histone-binding protein ... 1020 6.0e-103 1
UNIPROTKB|Q9I8G9 - symbol:RBBP7 "Histone-binding protein ... 1016 1.6e-102 1
UNIPROTKB|I3LKT8 - symbol:RBBP4 "Uncharacterized protein"... 993 4.4e-100 1
UNIPROTKB|E9PC52 - symbol:RBBP7 "Histone-binding protein ... 962 8.4e-97 1
UNIPROTKB|K7GRD3 - symbol:LOC100519001 "Uncharacterized p... 958 2.2e-96 1
UNIPROTKB|K7GKX8 - symbol:LOC100519001 "Uncharacterized p... 944 6.8e-95 1
UNIPROTKB|Q61Y48 - symbol:lin-53 "Probable histone-bindin... 812 6.6e-81 1
TAIR|locus:2161253 - symbol:MSI1 "MULTICOPY SUPRESSOR OF ... 798 2.0e-79 1
WB|WBGene00003036 - symbol:lin-53 species:6239 "Caenorhab... 785 4.8e-78 1
UNIPROTKB|P90916 - symbol:lin-53 "Probable histone-bindin... 785 4.8e-78 1
DICTYBASE|DDB_G0282529 - symbol:rbbD "putative Retinoblas... 753 1.2e-74 1
WB|WBGene00004312 - symbol:rba-1 species:6239 "Caenorhabd... 599 2.5e-58 1
POMBASE|SPCC1672.10 - symbol:mis16 "kinetochore protein M... 536 1.2e-51 1
TAIR|locus:2131551 - symbol:MSI3 "MULTICOPY SUPPRESSOR OF... 533 2.4e-51 1
TAIR|locus:2059856 - symbol:MSI2 "AT2G16780" species:3702... 530 5.1e-51 1
ASPGD|ASPL0000017699 - symbol:AN8187 species:162425 "Emer... 439 2.2e-41 1
UNIPROTKB|C9JPP3 - symbol:RBBP4 "Histone-binding protein ... 435 5.9e-41 1
UNIPROTKB|B4DRT0 - symbol:RBBP4 "Histone-binding protein ... 420 2.3e-39 1
UNIPROTKB|H0YCT5 - symbol:RBBP4 "Histone-binding protein ... 420 2.3e-39 1
GENEDB_PFALCIPARUM|PF13_0149 - symbol:PF13_0149 "chromati... 338 7.6e-37 2
UNIPROTKB|Q8IE52 - symbol:PF13_0149 "Chromatin assembly f... 338 7.6e-37 2
POMBASE|SPAC25H1.06 - symbol:pcf3 "CAF assembly factor (C... 387 7.2e-36 1
UNIPROTKB|E9PND5 - symbol:RBBP4 "Histone-binding protein ... 343 3.3e-31 1
GENEDB_PFALCIPARUM|PF14_0314 - symbol:PF14_0314 "chromati... 323 4.4e-29 1
UNIPROTKB|Q8ILD0 - symbol:PF14_0314 "Chromatin assembly f... 323 4.4e-29 1
SGD|S000000782 - symbol:HAT2 "Subunit of the Hat1p-Hat2p ... 321 7.1e-29 1
UNIPROTKB|Q5JNZ6 - symbol:RBBP7 "Histone-binding protein ... 320 9.1e-29 1
UNIPROTKB|C9J7L0 - symbol:RBBP7 "Histone-binding protein ... 302 7.3e-27 1
POMBASE|SPAC29A4.18 - symbol:prw1 "Clr6 histone deacetyla... 295 4.0e-26 1
CGD|CAL0005992 - symbol:orf19.3581 species:5476 "Candida ... 232 8.0e-21 2
CGD|CAL0005349 - symbol:HAT2 species:5476 "Candida albica... 249 1.8e-20 2
UNIPROTKB|Q59RH5 - symbol:HAT2 "Histone acetyltransferase... 249 1.8e-20 2
GENEDB_PFALCIPARUM|PFA0520c - symbol:PFA0520c "chromatin ... 249 3.4e-19 1
UNIPROTKB|Q8I238 - symbol:PFA_0520c "Chromatin assembly f... 249 3.4e-19 1
SGD|S000000399 - symbol:MSI1 "Subunit of chromatin assemb... 221 3.7e-19 2
TAIR|locus:2050372 - symbol:FVE species:3702 "Arabidopsis... 234 3.7e-17 1
CGD|CAL0003130 - symbol:orf19.7185 species:5476 "Candida ... 163 2.5e-11 2
UNIPROTKB|Q5A0B0 - symbol:CaO19.7185 "Putative uncharacte... 163 2.5e-11 2
DICTYBASE|DDB_G0291566 - symbol:grwd1 "glutamate-rich WD ... 168 7.5e-10 2
TAIR|locus:2134408 - symbol:NFC5 "AT4G29730" species:3702... 163 4.8e-09 1
TAIR|locus:2050388 - symbol:AT2G19540 "AT2G19540" species... 149 1.6e-07 1
ZFIN|ZDB-GENE-030131-9844 - symbol:grwd1 "glutamate-rich ... 141 1.2e-06 1
FB|FBgn0022288 - symbol:l(2)09851 "lethal (2) 09851" spec... 141 1.2e-06 1
ASPGD|ASPL0000069856 - symbol:AN7205 species:162425 "Emer... 129 3.4e-05 2
POMBASE|SPBC1711.07 - symbol:SPBC1711.07 "WD repeat prote... 126 6.1e-05 1
UNIPROTKB|Q292E8 - symbol:Ciao1 "Probable cytosolic iron-... 96 7.0e-05 2
UNIPROTKB|B4GDM7 - symbol:Ciao1 "Probable cytosolic iron-... 95 9.1e-05 2
UNIPROTKB|E2RBY0 - symbol:GRWD1 "Uncharacterized protein"... 123 0.00012 1
UNIPROTKB|Q1JQD2 - symbol:GRWD1 "Glutamate-rich WD repeat... 123 0.00012 1
UNIPROTKB|Q7PS24 - symbol:Ciao1 "Probable cytosolic iron-... 84 0.00012 2
UNIPROTKB|B4MY77 - symbol:Ciao1 "Probable cytosolic iron-... 89 0.00013 2
UNIPROTKB|Q9BQ67 - symbol:GRWD1 "Glutamate-rich WD repeat... 122 0.00015 1
TAIR|locus:2123752 - symbol:AT4G32990 "AT4G32990" species... 98 0.00016 2
DICTYBASE|DDB_G0295793 - symbol:DDB_G0295793 "WD40 repeat... 93 0.00018 2
RGD|1310649 - symbol:Grwd1 "glutamate-rich WD repeat cont... 121 0.00019 1
MGI|MGI:2141989 - symbol:Grwd1 "glutamate-rich WD repeat ... 121 0.00019 1
SGD|S000004738 - symbol:RRB1 "Nuclear protein involved in... 121 0.00024 1
UNIPROTKB|B4P7Q3 - symbol:Ciao1 "Probable cytosolic iron-... 93 0.00031 2
WB|WBGene00021899 - symbol:Y54H5A.1 species:6239 "Caenorh... 119 0.00033 1
DICTYBASE|DDB_G0275073 - symbol:pwp1 "periodic tryptophan... 84 0.00037 2
UNIPROTKB|B4QFZ8 - symbol:Ciao1 "Probable cytosolic iron-... 93 0.00039 2
ASPGD|ASPL0000075365 - symbol:sec13 species:162425 "Emeri... 87 0.00044 2
UNIPROTKB|B4E039 - symbol:DCAF7 "DDB1- and CUL4-associate... 94 0.00047 2
UNIPROTKB|B3NQR5 - symbol:Ciao1 "Probable cytosolic iron-... 92 0.00050 2
UNIPROTKB|E1BYP4 - symbol:PEX7 "Uncharacterized protein" ... 85 0.00065 2
UNIPROTKB|F1RL85 - symbol:GRWD1 "Uncharacterized protein"... 116 0.00070 1
UNIPROTKB|B4HRQ6 - symbol:Ciao1 "Probable cytosolic iron-... 93 0.00098 2
>UNIPROTKB|F2Z4M0 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9031
"Gallus gallus" [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0016589 "NURF complex"
evidence=IEA] [GO:0031497 "chromatin assembly" evidence=IEA]
[GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0035098 "ESC/E(Z)
complex" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 IPI:IPI00592914
EMBL:AADN02043764 ProteinModelPortal:F2Z4M0 SMR:F2Z4M0 PRIDE:F2Z4M0
Ensembl:ENSGALT00000005575 Uniprot:F2Z4M0
Length = 425
Score = 1108 (395.1 bits), Expect = 2.9e-112, P = 2.9e-112
Identities = 198/217 (91%), Positives = 215/217 (99%)
Query: 135 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDYSIHRLILGTHTSD 194
RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD+SIHRL+LGTHTSD
Sbjct: 15 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSD 74
Query: 195 EQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMP 254
EQNHL+IASVQLPN+DAQFDAS+YD++KG+FGGFGSVSGKIEIEIKINHEGEVNRARYMP
Sbjct: 75 EQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMP 134
Query: 255 QNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYGLSWNPSLNGYLL 314
QNPC+IATKTPSSDVLVFDYTKHPSKPDP+GEC+PDLRLRGHQKEGYGLSWNP+L+G+LL
Sbjct: 135 QNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLL 194
Query: 315 SASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVE 351
SASDDHTICLWDI+A PKE +V+DAKTIFTGHTAVVE
Sbjct: 195 SASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVE 231
Score = 420 (152.9 bits), Expect = 2.3e-39, P = 2.3e-39
Identities = 76/79 (96%), Positives = 78/79 (98%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
VQWSPHNETILASSGTDRRL+VWDLSKIGEEQS EDAEDGPPELLFIHGGHTAKISDFSW
Sbjct: 323 VQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSW 382
Query: 61 NPNEPWVICSVSEDNIMQI 79
NPNEPWVICSVSEDNIMQ+
Sbjct: 383 NPNEPWVICSVSEDNIMQV 401
Score = 269 (99.8 bits), Expect = 5.8e-29, Sum P(2) = 5.8e-29
Identities = 49/56 (87%), Positives = 52/56 (92%)
Query: 88 FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRVINEEYKI 143
FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTR +++ I
Sbjct: 8 FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSI 63
Score = 93 (37.8 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 23/79 (29%), Positives = 39/79 (49%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
+ W+P+ L S+ D + +WD+S + +E DA+ I GHTA + D SW
Sbjct: 183 LSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKT-------IFTGHTAVVEDVSW 235
Query: 61 NPNEPWVICSVSEDNIMQI 79
+ + SV++D + I
Sbjct: 236 HLLHESLFGSVADDQKLMI 254
Score = 90 (36.7 bits), Expect = 5.8e-29, Sum P(2) = 5.8e-29
Identities = 22/98 (22%), Positives = 48/98 (48%)
Query: 234 KIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK--HPSKPDPNGECHPDL 291
K+++ +H+ E+ + ++ P N ++A+ + V+D +K P+ + P+L
Sbjct: 307 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPEL 366
Query: 292 RL--RGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI 327
GH + SWNP+ + S S+D+ + +W +
Sbjct: 367 LFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQM 404
Score = 80 (33.2 bits), Expect = 6.4e-28, Sum P(2) = 6.4e-28
Identities = 28/115 (24%), Positives = 47/115 (40%)
Query: 243 HEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYG 302
H EVN + P + ++AT + V ++D K H H+ E +
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK------LHS---FESHKDEIFQ 322
Query: 303 LSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKT-------IFTGHTAVV 350
+ W+P L S+ D + +WD++ +E DA+ I GHTA +
Sbjct: 323 VQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKI 377
Score = 69 (29.3 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 22/96 (22%), Positives = 42/96 (43%)
Query: 2 QWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWN 61
++ P N I+A+ + V+D +K + + + P+L GH + SWN
Sbjct: 131 RYMPQNPCIIATKTPSSDVLVFDYTK--HPSKPDPSGECNPDLRL--RGHQKEGYGLSWN 186
Query: 62 PNEPWVICSVSEDNIMQILSVVCVEPFDDAVEERVI 97
PN + S S+D+ + + + V V+ + I
Sbjct: 187 PNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTI 222
Score = 64 (27.6 bits), Expect = 3.0e-26, Sum P(2) = 3.0e-26
Identities = 15/44 (34%), Positives = 20/44 (45%)
Query: 284 NGECHPDLRLRGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI 327
N P + H E LS+NP L + S D T+ LWD+
Sbjct: 260 NNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 303
Score = 60 (26.2 bits), Expect = 7.9e-26, Sum P(2) = 7.9e-26
Identities = 15/49 (30%), Positives = 22/49 (44%)
Query: 295 GHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI--NATPKENRVIDAKT 341
GH +SW+ S +DD + +WD N T K + +DA T
Sbjct: 225 GHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHT 273
>UNIPROTKB|Q9W7I5 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9031
"Gallus gallus" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0033186
"CAF-1 complex" evidence=ISS] [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006338
"chromatin remodeling" evidence=ISS] [GO:0008094 "DNA-dependent
ATPase activity" evidence=ISS] [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338
GO:GO:0007049 GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330 CTD:5928
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:AF097750 IPI:IPI00592914
RefSeq:NP_990183.1 UniGene:Gga.1029 ProteinModelPortal:Q9W7I5
SMR:Q9W7I5 STRING:Q9W7I5 PRIDE:Q9W7I5 GeneID:395658 KEGG:gga:395658
InParanoid:Q9W7I5 NextBio:20815730 Uniprot:Q9W7I5
Length = 425
Score = 1108 (395.1 bits), Expect = 2.9e-112, P = 2.9e-112
Identities = 198/217 (91%), Positives = 215/217 (99%)
Query: 135 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDYSIHRLILGTHTSD 194
RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD+SIHRL+LGTHTSD
Sbjct: 15 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSD 74
Query: 195 EQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMP 254
EQNHL+IASVQLPN+DAQFDAS+YD++KG+FGGFGSVSGKIEIEIKINHEGEVNRARYMP
Sbjct: 75 EQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMP 134
Query: 255 QNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYGLSWNPSLNGYLL 314
QNPC+IATKTPSSDVLVFDYTKHPSKPDP+GEC+PDLRLRGHQKEGYGLSWNP+L+G+LL
Sbjct: 135 QNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLL 194
Query: 315 SASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVE 351
SASDDHTICLWDI+A PKE +V+DAKTIFTGHTAVVE
Sbjct: 195 SASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVE 231
Score = 420 (152.9 bits), Expect = 2.3e-39, P = 2.3e-39
Identities = 76/79 (96%), Positives = 78/79 (98%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
VQWSPHNETILASSGTDRRL+VWDLSKIGEEQS EDAEDGPPELLFIHGGHTAKISDFSW
Sbjct: 323 VQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSW 382
Query: 61 NPNEPWVICSVSEDNIMQI 79
NPNEPWVICSVSEDNIMQ+
Sbjct: 383 NPNEPWVICSVSEDNIMQV 401
Score = 269 (99.8 bits), Expect = 5.8e-29, Sum P(2) = 5.8e-29
Identities = 49/56 (87%), Positives = 52/56 (92%)
Query: 88 FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRVINEEYKI 143
FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTR +++ I
Sbjct: 8 FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSI 63
Score = 93 (37.8 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 23/79 (29%), Positives = 39/79 (49%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
+ W+P+ L S+ D + +WD+S + +E DA+ I GHTA + D SW
Sbjct: 183 LSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKT-------IFTGHTAVVEDVSW 235
Query: 61 NPNEPWVICSVSEDNIMQI 79
+ + SV++D + I
Sbjct: 236 HLLHESLFGSVADDQKLMI 254
Score = 90 (36.7 bits), Expect = 5.8e-29, Sum P(2) = 5.8e-29
Identities = 22/98 (22%), Positives = 48/98 (48%)
Query: 234 KIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK--HPSKPDPNGECHPDL 291
K+++ +H+ E+ + ++ P N ++A+ + V+D +K P+ + P+L
Sbjct: 307 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPEL 366
Query: 292 RL--RGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI 327
GH + SWNP+ + S S+D+ + +W +
Sbjct: 367 LFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQM 404
Score = 80 (33.2 bits), Expect = 6.4e-28, Sum P(2) = 6.4e-28
Identities = 28/115 (24%), Positives = 47/115 (40%)
Query: 243 HEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYG 302
H EVN + P + ++AT + V ++D K H H+ E +
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK------LHS---FESHKDEIFQ 322
Query: 303 LSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKT-------IFTGHTAVV 350
+ W+P L S+ D + +WD++ +E DA+ I GHTA +
Sbjct: 323 VQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKI 377
Score = 69 (29.3 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 22/96 (22%), Positives = 42/96 (43%)
Query: 2 QWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWN 61
++ P N I+A+ + V+D +K + + + P+L GH + SWN
Sbjct: 131 RYMPQNPCIIATKTPSSDVLVFDYTK--HPSKPDPSGECNPDLRL--RGHQKEGYGLSWN 186
Query: 62 PNEPWVICSVSEDNIMQILSVVCVEPFDDAVEERVI 97
PN + S S+D+ + + + V V+ + I
Sbjct: 187 PNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTI 222
Score = 64 (27.6 bits), Expect = 3.0e-26, Sum P(2) = 3.0e-26
Identities = 15/44 (34%), Positives = 20/44 (45%)
Query: 284 NGECHPDLRLRGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI 327
N P + H E LS+NP L + S D T+ LWD+
Sbjct: 260 NNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 303
Score = 60 (26.2 bits), Expect = 7.9e-26, Sum P(2) = 7.9e-26
Identities = 15/49 (30%), Positives = 22/49 (44%)
Query: 295 GHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI--NATPKENRVIDAKT 341
GH +SW+ S +DD + +WD N T K + +DA T
Sbjct: 225 GHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHT 273
>UNIPROTKB|Q3MHL3 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9913
"Bos taurus" [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0016581
"NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0006338 GO:GO:0007049 GO:GO:0035098 GO:GO:0031497
GO:GO:0016589 GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752
OMA:CQPDLRL GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265
GO:GO:0008094 HOGENOM:HOG000160330 EMBL:BT030530 EMBL:BC105195
IPI:IPI00717704 RefSeq:NP_001070481.1 UniGene:Bt.101874
ProteinModelPortal:Q3MHL3 SMR:Q3MHL3 STRING:Q3MHL3 PRIDE:Q3MHL3
Ensembl:ENSBTAT00000007758 GeneID:767940 KEGG:bta:767940 CTD:5928
HOVERGEN:HBG053236 InParanoid:Q3MHL3 OrthoDB:EOG4DBTDH
NextBio:20918297 Uniprot:Q3MHL3
Length = 425
Score = 1108 (395.1 bits), Expect = 2.9e-112, P = 2.9e-112
Identities = 198/217 (91%), Positives = 215/217 (99%)
Query: 135 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDYSIHRLILGTHTSD 194
RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD+SIHRL+LGTHTSD
Sbjct: 15 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSD 74
Query: 195 EQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMP 254
EQNHL+IASVQLPN+DAQFDAS+YD++KG+FGGFGSVSGKIEIEIKINHEGEVNRARYMP
Sbjct: 75 EQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMP 134
Query: 255 QNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYGLSWNPSLNGYLL 314
QNPC+IATKTPSSDVLVFDYTKHPSKPDP+GEC+PDLRLRGHQKEGYGLSWNP+L+G+LL
Sbjct: 135 QNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLL 194
Query: 315 SASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVE 351
SASDDHTICLWDI+A PKE +V+DAKTIFTGHTAVVE
Sbjct: 195 SASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVE 231
Score = 420 (152.9 bits), Expect = 2.3e-39, P = 2.3e-39
Identities = 76/79 (96%), Positives = 78/79 (98%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
VQWSPHNETILASSGTDRRL+VWDLSKIGEEQS EDAEDGPPELLFIHGGHTAKISDFSW
Sbjct: 323 VQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSW 382
Query: 61 NPNEPWVICSVSEDNIMQI 79
NPNEPWVICSVSEDNIMQ+
Sbjct: 383 NPNEPWVICSVSEDNIMQV 401
Score = 269 (99.8 bits), Expect = 5.8e-29, Sum P(2) = 5.8e-29
Identities = 49/56 (87%), Positives = 52/56 (92%)
Query: 88 FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRVINEEYKI 143
FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTR +++ I
Sbjct: 8 FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSI 63
Score = 93 (37.8 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 23/79 (29%), Positives = 39/79 (49%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
+ W+P+ L S+ D + +WD+S + +E DA+ I GHTA + D SW
Sbjct: 183 LSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKT-------IFTGHTAVVEDVSW 235
Query: 61 NPNEPWVICSVSEDNIMQI 79
+ + SV++D + I
Sbjct: 236 HLLHESLFGSVADDQKLMI 254
Score = 90 (36.7 bits), Expect = 5.8e-29, Sum P(2) = 5.8e-29
Identities = 22/98 (22%), Positives = 48/98 (48%)
Query: 234 KIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK--HPSKPDPNGECHPDL 291
K+++ +H+ E+ + ++ P N ++A+ + V+D +K P+ + P+L
Sbjct: 307 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPEL 366
Query: 292 RL--RGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI 327
GH + SWNP+ + S S+D+ + +W +
Sbjct: 367 LFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQM 404
Score = 80 (33.2 bits), Expect = 6.4e-28, Sum P(2) = 6.4e-28
Identities = 28/115 (24%), Positives = 47/115 (40%)
Query: 243 HEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYG 302
H EVN + P + ++AT + V ++D K H H+ E +
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK------LHS---FESHKDEIFQ 322
Query: 303 LSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKT-------IFTGHTAVV 350
+ W+P L S+ D + +WD++ +E DA+ I GHTA +
Sbjct: 323 VQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKI 377
Score = 69 (29.3 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 22/96 (22%), Positives = 42/96 (43%)
Query: 2 QWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWN 61
++ P N I+A+ + V+D +K + + + P+L GH + SWN
Sbjct: 131 RYMPQNPCIIATKTPSSDVLVFDYTK--HPSKPDPSGECNPDLRL--RGHQKEGYGLSWN 186
Query: 62 PNEPWVICSVSEDNIMQILSVVCVEPFDDAVEERVI 97
PN + S S+D+ + + + V V+ + I
Sbjct: 187 PNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTI 222
Score = 64 (27.6 bits), Expect = 3.0e-26, Sum P(2) = 3.0e-26
Identities = 15/44 (34%), Positives = 20/44 (45%)
Query: 284 NGECHPDLRLRGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI 327
N P + H E LS+NP L + S D T+ LWD+
Sbjct: 260 NNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 303
Score = 60 (26.2 bits), Expect = 7.9e-26, Sum P(2) = 7.9e-26
Identities = 15/49 (30%), Positives = 22/49 (44%)
Query: 295 GHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI--NATPKENRVIDAKT 341
GH +SW+ S +DD + +WD N T K + +DA T
Sbjct: 225 GHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHT 273
>UNIPROTKB|E2QXR8 [details] [associations]
symbol:RBBP4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0035098 "ESC/E(Z) complex" evidence=IEA]
[GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0031497 "chromatin
assembly" evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 KO:K10752 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 CTD:5928
EMBL:AAEX03001654 RefSeq:XP_864445.1 ProteinModelPortal:E2QXR8
SMR:E2QXR8 PRIDE:E2QXR8 Ensembl:ENSCAFT00000016755 GeneID:478149
KEGG:cfa:478149 NextBio:20853518 Uniprot:E2QXR8
Length = 425
Score = 1108 (395.1 bits), Expect = 2.9e-112, P = 2.9e-112
Identities = 198/217 (91%), Positives = 215/217 (99%)
Query: 135 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDYSIHRLILGTHTSD 194
RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD+SIHRL+LGTHTSD
Sbjct: 15 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSD 74
Query: 195 EQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMP 254
EQNHL+IASVQLPN+DAQFDAS+YD++KG+FGGFGSVSGKIEIEIKINHEGEVNRARYMP
Sbjct: 75 EQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMP 134
Query: 255 QNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYGLSWNPSLNGYLL 314
QNPC+IATKTPSSDVLVFDYTKHPSKPDP+GEC+PDLRLRGHQKEGYGLSWNP+L+G+LL
Sbjct: 135 QNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLL 194
Query: 315 SASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVE 351
SASDDHTICLWDI+A PKE +V+DAKTIFTGHTAVVE
Sbjct: 195 SASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVE 231
Score = 420 (152.9 bits), Expect = 2.3e-39, P = 2.3e-39
Identities = 76/79 (96%), Positives = 78/79 (98%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
VQWSPHNETILASSGTDRRL+VWDLSKIGEEQS EDAEDGPPELLFIHGGHTAKISDFSW
Sbjct: 323 VQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSW 382
Query: 61 NPNEPWVICSVSEDNIMQI 79
NPNEPWVICSVSEDNIMQ+
Sbjct: 383 NPNEPWVICSVSEDNIMQV 401
Score = 269 (99.8 bits), Expect = 5.8e-29, Sum P(2) = 5.8e-29
Identities = 49/56 (87%), Positives = 52/56 (92%)
Query: 88 FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRVINEEYKI 143
FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTR +++ I
Sbjct: 8 FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSI 63
Score = 93 (37.8 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 23/79 (29%), Positives = 39/79 (49%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
+ W+P+ L S+ D + +WD+S + +E DA+ I GHTA + D SW
Sbjct: 183 LSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKT-------IFTGHTAVVEDVSW 235
Query: 61 NPNEPWVICSVSEDNIMQI 79
+ + SV++D + I
Sbjct: 236 HLLHESLFGSVADDQKLMI 254
Score = 90 (36.7 bits), Expect = 5.8e-29, Sum P(2) = 5.8e-29
Identities = 22/98 (22%), Positives = 48/98 (48%)
Query: 234 KIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK--HPSKPDPNGECHPDL 291
K+++ +H+ E+ + ++ P N ++A+ + V+D +K P+ + P+L
Sbjct: 307 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPEL 366
Query: 292 RL--RGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI 327
GH + SWNP+ + S S+D+ + +W +
Sbjct: 367 LFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQM 404
Score = 80 (33.2 bits), Expect = 6.4e-28, Sum P(2) = 6.4e-28
Identities = 28/115 (24%), Positives = 47/115 (40%)
Query: 243 HEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYG 302
H EVN + P + ++AT + V ++D K H H+ E +
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK------LHS---FESHKDEIFQ 322
Query: 303 LSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKT-------IFTGHTAVV 350
+ W+P L S+ D + +WD++ +E DA+ I GHTA +
Sbjct: 323 VQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKI 377
Score = 69 (29.3 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 22/96 (22%), Positives = 42/96 (43%)
Query: 2 QWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWN 61
++ P N I+A+ + V+D +K + + + P+L GH + SWN
Sbjct: 131 RYMPQNPCIIATKTPSSDVLVFDYTK--HPSKPDPSGECNPDLRL--RGHQKEGYGLSWN 186
Query: 62 PNEPWVICSVSEDNIMQILSVVCVEPFDDAVEERVI 97
PN + S S+D+ + + + V V+ + I
Sbjct: 187 PNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTI 222
Score = 64 (27.6 bits), Expect = 3.0e-26, Sum P(2) = 3.0e-26
Identities = 15/44 (34%), Positives = 20/44 (45%)
Query: 284 NGECHPDLRLRGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI 327
N P + H E LS+NP L + S D T+ LWD+
Sbjct: 260 NNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 303
Score = 60 (26.2 bits), Expect = 7.9e-26, Sum P(2) = 7.9e-26
Identities = 15/49 (30%), Positives = 22/49 (44%)
Query: 295 GHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI--NATPKENRVIDAKT 341
GH +SW+ S +DD + +WD N T K + +DA T
Sbjct: 225 GHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHT 273
>UNIPROTKB|Q09028 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016581 "NuRD complex" evidence=NAS;IDA] [GO:0016589 "NURF
complex" evidence=IDA] [GO:0035098 "ESC/E(Z) complex" evidence=IDA]
[GO:0033186 "CAF-1 complex" evidence=IDA] [GO:0031497 "chromatin
assembly" evidence=IDA] [GO:0008285 "negative regulation of cell
proliferation" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=IDA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IDA] [GO:0000278 "mitotic
cell cycle" evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006334 "nucleosome assembly" evidence=TAS] [GO:0034080 "CENP-A
containing nucleosome assembly at centromere" evidence=TAS]
[GO:0016580 "Sin3 complex" evidence=NAS] [GO:0042393 "histone
binding" evidence=NAS] [GO:0042826 "histone deacetylase binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Pathway_Interaction_DB:telomerasepathway
Reactome:REACT_115566 GO:GO:0008285 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CH471059 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035098
GO:GO:0042393 Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0034080
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0000278
GO:GO:0016589 GO:GO:0033186 KO:K10752 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0016580 PDB:2XU7 PDBsum:2XU7
CTD:5928 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:X74262
EMBL:X71810 EMBL:BT007309 EMBL:AK299251 EMBL:AK312571 EMBL:AK222779
EMBL:AC114489 EMBL:BC003092 EMBL:BC015123 EMBL:BC053904
EMBL:BC075836 IPI:IPI00328319 IPI:IPI00645329 IPI:IPI00877802
IPI:IPI00877934 PIR:S36112 RefSeq:NP_001128727.1
RefSeq:NP_001128728.1 RefSeq:NP_005601.1 UniGene:Hs.16003 PDB:3GFC
PDBsum:3GFC ProteinModelPortal:Q09028 SMR:Q09028 DIP:DIP-33495N
IntAct:Q09028 MINT:MINT-90543 STRING:Q09028 PhosphoSite:Q09028
DMDM:1172846 PaxDb:Q09028 PRIDE:Q09028 DNASU:5928
Ensembl:ENST00000373485 Ensembl:ENST00000373493
Ensembl:ENST00000414241 Ensembl:ENST00000458695 GeneID:5928
KEGG:hsa:5928 UCSC:uc001bvr.3 UCSC:uc001bvs.3 GeneCards:GC01P033116
HGNC:HGNC:9887 HPA:CAB006264 MIM:602923 neXtProt:NX_Q09028
PharmGKB:PA34251 InParanoid:Q09028 PhylomeDB:Q09028 ChiTaRS:RBBP4
EvolutionaryTrace:Q09028 GenomeRNAi:5928 NextBio:23094
ArrayExpress:Q09028 Bgee:Q09028 CleanEx:HS_RBBP4
Genevestigator:Q09028 GermOnline:ENSG00000162521 Uniprot:Q09028
Length = 425
Score = 1108 (395.1 bits), Expect = 2.9e-112, P = 2.9e-112
Identities = 198/217 (91%), Positives = 215/217 (99%)
Query: 135 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDYSIHRLILGTHTSD 194
RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD+SIHRL+LGTHTSD
Sbjct: 15 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSD 74
Query: 195 EQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMP 254
EQNHL+IASVQLPN+DAQFDAS+YD++KG+FGGFGSVSGKIEIEIKINHEGEVNRARYMP
Sbjct: 75 EQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMP 134
Query: 255 QNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYGLSWNPSLNGYLL 314
QNPC+IATKTPSSDVLVFDYTKHPSKPDP+GEC+PDLRLRGHQKEGYGLSWNP+L+G+LL
Sbjct: 135 QNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLL 194
Query: 315 SASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVE 351
SASDDHTICLWDI+A PKE +V+DAKTIFTGHTAVVE
Sbjct: 195 SASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVE 231
Score = 420 (152.9 bits), Expect = 2.3e-39, P = 2.3e-39
Identities = 76/79 (96%), Positives = 78/79 (98%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
VQWSPHNETILASSGTDRRL+VWDLSKIGEEQS EDAEDGPPELLFIHGGHTAKISDFSW
Sbjct: 323 VQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSW 382
Query: 61 NPNEPWVICSVSEDNIMQI 79
NPNEPWVICSVSEDNIMQ+
Sbjct: 383 NPNEPWVICSVSEDNIMQV 401
Score = 269 (99.8 bits), Expect = 5.8e-29, Sum P(2) = 5.8e-29
Identities = 49/56 (87%), Positives = 52/56 (92%)
Query: 88 FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRVINEEYKI 143
FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTR +++ I
Sbjct: 8 FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSI 63
Score = 93 (37.8 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 23/79 (29%), Positives = 39/79 (49%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
+ W+P+ L S+ D + +WD+S + +E DA+ I GHTA + D SW
Sbjct: 183 LSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKT-------IFTGHTAVVEDVSW 235
Query: 61 NPNEPWVICSVSEDNIMQI 79
+ + SV++D + I
Sbjct: 236 HLLHESLFGSVADDQKLMI 254
Score = 90 (36.7 bits), Expect = 5.8e-29, Sum P(2) = 5.8e-29
Identities = 22/98 (22%), Positives = 48/98 (48%)
Query: 234 KIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK--HPSKPDPNGECHPDL 291
K+++ +H+ E+ + ++ P N ++A+ + V+D +K P+ + P+L
Sbjct: 307 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPEL 366
Query: 292 RL--RGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI 327
GH + SWNP+ + S S+D+ + +W +
Sbjct: 367 LFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQM 404
Score = 80 (33.2 bits), Expect = 6.4e-28, Sum P(2) = 6.4e-28
Identities = 28/115 (24%), Positives = 47/115 (40%)
Query: 243 HEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYG 302
H EVN + P + ++AT + V ++D K H H+ E +
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK------LHS---FESHKDEIFQ 322
Query: 303 LSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKT-------IFTGHTAVV 350
+ W+P L S+ D + +WD++ +E DA+ I GHTA +
Sbjct: 323 VQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKI 377
Score = 69 (29.3 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 22/96 (22%), Positives = 42/96 (43%)
Query: 2 QWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWN 61
++ P N I+A+ + V+D +K + + + P+L GH + SWN
Sbjct: 131 RYMPQNPCIIATKTPSSDVLVFDYTK--HPSKPDPSGECNPDLRL--RGHQKEGYGLSWN 186
Query: 62 PNEPWVICSVSEDNIMQILSVVCVEPFDDAVEERVI 97
PN + S S+D+ + + + V V+ + I
Sbjct: 187 PNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTI 222
Score = 64 (27.6 bits), Expect = 3.0e-26, Sum P(2) = 3.0e-26
Identities = 15/44 (34%), Positives = 20/44 (45%)
Query: 284 NGECHPDLRLRGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI 327
N P + H E LS+NP L + S D T+ LWD+
Sbjct: 260 NNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 303
Score = 60 (26.2 bits), Expect = 7.9e-26, Sum P(2) = 7.9e-26
Identities = 15/49 (30%), Positives = 22/49 (44%)
Query: 295 GHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI--NATPKENRVIDAKT 341
GH +SW+ S +DD + +WD N T K + +DA T
Sbjct: 225 GHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHT 273
>MGI|MGI:1194912 [details] [associations]
symbol:Rbbp4 "retinoblastoma binding protein 4"
species:10090 "Mus musculus" [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=ISO;TAS] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=ISO;IDA] [GO:0016589 "NURF complex" evidence=ISO]
[GO:0031497 "chromatin assembly" evidence=ISO] [GO:0033186 "CAF-1
complex" evidence=ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO;IDA] [GO:0042826 "histone deacetylase binding"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1194912 EMBL:CH466552 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338 GO:GO:0007049
GO:GO:0035098 GO:GO:0031497 EMBL:AL607123 GO:GO:0016589
GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752 OMA:CQPDLRL
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094
HOGENOM:HOG000160330 CTD:5928 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH
EMBL:U35141 EMBL:CU234133 EMBL:BC138568 EMBL:BC138570
IPI:IPI00828412 PIR:I49366 RefSeq:NP_033056.2 UniGene:Mm.12145
ProteinModelPortal:Q60972 SMR:Q60972 DIP:DIP-32855N IntAct:Q60972
STRING:Q60972 PhosphoSite:Q60972 REPRODUCTION-2DPAGE:Q60972
PaxDb:Q60972 PRIDE:Q60972 Ensembl:ENSMUST00000102598 GeneID:19646
KEGG:mmu:19646 InParanoid:A2A875 NextBio:296894 Bgee:Q60972
CleanEx:MM_RBBP4 Genevestigator:Q60972
GermOnline:ENSMUSG00000057236 Uniprot:Q60972
Length = 425
Score = 1108 (395.1 bits), Expect = 2.9e-112, P = 2.9e-112
Identities = 198/217 (91%), Positives = 215/217 (99%)
Query: 135 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDYSIHRLILGTHTSD 194
RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD+SIHRL+LGTHTSD
Sbjct: 15 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSD 74
Query: 195 EQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMP 254
EQNHL+IASVQLPN+DAQFDAS+YD++KG+FGGFGSVSGKIEIEIKINHEGEVNRARYMP
Sbjct: 75 EQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMP 134
Query: 255 QNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYGLSWNPSLNGYLL 314
QNPC+IATKTPSSDVLVFDYTKHPSKPDP+GEC+PDLRLRGHQKEGYGLSWNP+L+G+LL
Sbjct: 135 QNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLL 194
Query: 315 SASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVE 351
SASDDHTICLWDI+A PKE +V+DAKTIFTGHTAVVE
Sbjct: 195 SASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVE 231
Score = 420 (152.9 bits), Expect = 2.3e-39, P = 2.3e-39
Identities = 76/79 (96%), Positives = 78/79 (98%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
VQWSPHNETILASSGTDRRL+VWDLSKIGEEQS EDAEDGPPELLFIHGGHTAKISDFSW
Sbjct: 323 VQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSW 382
Query: 61 NPNEPWVICSVSEDNIMQI 79
NPNEPWVICSVSEDNIMQ+
Sbjct: 383 NPNEPWVICSVSEDNIMQV 401
Score = 269 (99.8 bits), Expect = 5.8e-29, Sum P(2) = 5.8e-29
Identities = 49/56 (87%), Positives = 52/56 (92%)
Query: 88 FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRVINEEYKI 143
FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTR +++ I
Sbjct: 8 FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSI 63
Score = 93 (37.8 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 23/79 (29%), Positives = 39/79 (49%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
+ W+P+ L S+ D + +WD+S + +E DA+ I GHTA + D SW
Sbjct: 183 LSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKT-------IFTGHTAVVEDVSW 235
Query: 61 NPNEPWVICSVSEDNIMQI 79
+ + SV++D + I
Sbjct: 236 HLLHESLFGSVADDQKLMI 254
Score = 90 (36.7 bits), Expect = 5.8e-29, Sum P(2) = 5.8e-29
Identities = 22/98 (22%), Positives = 48/98 (48%)
Query: 234 KIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK--HPSKPDPNGECHPDL 291
K+++ +H+ E+ + ++ P N ++A+ + V+D +K P+ + P+L
Sbjct: 307 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPEL 366
Query: 292 RL--RGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI 327
GH + SWNP+ + S S+D+ + +W +
Sbjct: 367 LFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQM 404
Score = 80 (33.2 bits), Expect = 6.4e-28, Sum P(2) = 6.4e-28
Identities = 28/115 (24%), Positives = 47/115 (40%)
Query: 243 HEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYG 302
H EVN + P + ++AT + V ++D K H H+ E +
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK------LHS---FESHKDEIFQ 322
Query: 303 LSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKT-------IFTGHTAVV 350
+ W+P L S+ D + +WD++ +E DA+ I GHTA +
Sbjct: 323 VQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKI 377
Score = 69 (29.3 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 22/96 (22%), Positives = 42/96 (43%)
Query: 2 QWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWN 61
++ P N I+A+ + V+D +K + + + P+L GH + SWN
Sbjct: 131 RYMPQNPCIIATKTPSSDVLVFDYTK--HPSKPDPSGECNPDLRL--RGHQKEGYGLSWN 186
Query: 62 PNEPWVICSVSEDNIMQILSVVCVEPFDDAVEERVI 97
PN + S S+D+ + + + V V+ + I
Sbjct: 187 PNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTI 222
Score = 64 (27.6 bits), Expect = 3.0e-26, Sum P(2) = 3.0e-26
Identities = 15/44 (34%), Positives = 20/44 (45%)
Query: 284 NGECHPDLRLRGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI 327
N P + H E LS+NP L + S D T+ LWD+
Sbjct: 260 NNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 303
Score = 60 (26.2 bits), Expect = 7.9e-26, Sum P(2) = 7.9e-26
Identities = 15/49 (30%), Positives = 22/49 (44%)
Query: 295 GHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI--NATPKENRVIDAKT 341
GH +SW+ S +DD + +WD N T K + +DA T
Sbjct: 225 GHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHT 273
>RGD|1593768 [details] [associations]
symbol:Rbbp4 "retinoblastoma binding protein 4" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0006338
"chromatin remodeling" evidence=IEA;ISO] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA;ISO] [GO:0016581 "NuRD complex"
evidence=IEA;ISO] [GO:0016589 "NURF complex" evidence=IEA;ISO]
[GO:0031497 "chromatin assembly" evidence=IEA;ISO] [GO:0033186
"CAF-1 complex" evidence=IEA;ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=IEA;ISO] [GO:0042826 "histone deacetylase binding"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1593768 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338 GO:GO:0031497
GO:GO:0016589 GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094
EMBL:CH473968 HOGENOM:HOG000160330 CTD:5928 HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC168994 IPI:IPI00366789
RefSeq:NP_001101382.1 UniGene:Rn.224577 SMR:B5DFB2 STRING:B5DFB2
Ensembl:ENSRNOT00000029177 GeneID:313048 KEGG:rno:313048
NextBio:665530 Genevestigator:B5DFB2 Uniprot:B5DFB2
Length = 425
Score = 1108 (395.1 bits), Expect = 2.9e-112, P = 2.9e-112
Identities = 198/217 (91%), Positives = 215/217 (99%)
Query: 135 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDYSIHRLILGTHTSD 194
RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD+SIHRL+LGTHTSD
Sbjct: 15 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSD 74
Query: 195 EQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMP 254
EQNHL+IASVQLPN+DAQFDAS+YD++KG+FGGFGSVSGKIEIEIKINHEGEVNRARYMP
Sbjct: 75 EQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMP 134
Query: 255 QNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYGLSWNPSLNGYLL 314
QNPC+IATKTPSSDVLVFDYTKHPSKPDP+GEC+PDLRLRGHQKEGYGLSWNP+L+G+LL
Sbjct: 135 QNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLL 194
Query: 315 SASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVE 351
SASDDHTICLWDI+A PKE +V+DAKTIFTGHTAVVE
Sbjct: 195 SASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVE 231
Score = 420 (152.9 bits), Expect = 2.3e-39, P = 2.3e-39
Identities = 76/79 (96%), Positives = 78/79 (98%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
VQWSPHNETILASSGTDRRL+VWDLSKIGEEQS EDAEDGPPELLFIHGGHTAKISDFSW
Sbjct: 323 VQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSW 382
Query: 61 NPNEPWVICSVSEDNIMQI 79
NPNEPWVICSVSEDNIMQ+
Sbjct: 383 NPNEPWVICSVSEDNIMQV 401
Score = 269 (99.8 bits), Expect = 5.8e-29, Sum P(2) = 5.8e-29
Identities = 49/56 (87%), Positives = 52/56 (92%)
Query: 88 FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRVINEEYKI 143
FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTR +++ I
Sbjct: 8 FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSI 63
Score = 93 (37.8 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 23/79 (29%), Positives = 39/79 (49%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
+ W+P+ L S+ D + +WD+S + +E DA+ I GHTA + D SW
Sbjct: 183 LSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKT-------IFTGHTAVVEDVSW 235
Query: 61 NPNEPWVICSVSEDNIMQI 79
+ + SV++D + I
Sbjct: 236 HLLHESLFGSVADDQKLMI 254
Score = 90 (36.7 bits), Expect = 5.8e-29, Sum P(2) = 5.8e-29
Identities = 22/98 (22%), Positives = 48/98 (48%)
Query: 234 KIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK--HPSKPDPNGECHPDL 291
K+++ +H+ E+ + ++ P N ++A+ + V+D +K P+ + P+L
Sbjct: 307 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPEL 366
Query: 292 RL--RGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI 327
GH + SWNP+ + S S+D+ + +W +
Sbjct: 367 LFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQM 404
Score = 80 (33.2 bits), Expect = 6.4e-28, Sum P(2) = 6.4e-28
Identities = 28/115 (24%), Positives = 47/115 (40%)
Query: 243 HEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYG 302
H EVN + P + ++AT + V ++D K H H+ E +
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK------LHS---FESHKDEIFQ 322
Query: 303 LSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKT-------IFTGHTAVV 350
+ W+P L S+ D + +WD++ +E DA+ I GHTA +
Sbjct: 323 VQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKI 377
Score = 69 (29.3 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 22/96 (22%), Positives = 42/96 (43%)
Query: 2 QWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWN 61
++ P N I+A+ + V+D +K + + + P+L GH + SWN
Sbjct: 131 RYMPQNPCIIATKTPSSDVLVFDYTK--HPSKPDPSGECNPDLRL--RGHQKEGYGLSWN 186
Query: 62 PNEPWVICSVSEDNIMQILSVVCVEPFDDAVEERVI 97
PN + S S+D+ + + + V V+ + I
Sbjct: 187 PNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTI 222
Score = 64 (27.6 bits), Expect = 3.0e-26, Sum P(2) = 3.0e-26
Identities = 15/44 (34%), Positives = 20/44 (45%)
Query: 284 NGECHPDLRLRGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI 327
N P + H E LS+NP L + S D T+ LWD+
Sbjct: 260 NNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 303
Score = 60 (26.2 bits), Expect = 7.9e-26, Sum P(2) = 7.9e-26
Identities = 15/49 (30%), Positives = 22/49 (44%)
Query: 295 GHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI--NATPKENRVIDAKT 341
GH +SW+ S +DD + +WD N T K + +DA T
Sbjct: 225 GHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHT 273
>UNIPROTKB|Q5RF92 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9601
"Pongo abelii" [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0007049
GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 CTD:5928 HOVERGEN:HBG053236
EMBL:CR857269 RefSeq:NP_001124686.1 UniGene:Pab.10290
UniGene:Pab.17706 ProteinModelPortal:Q5RF92 SMR:Q5RF92
GeneID:100461561 KEGG:pon:100461561 InParanoid:Q5RF92
Uniprot:Q5RF92
Length = 425
Score = 1103 (393.3 bits), Expect = 9.7e-112, P = 9.7e-112
Identities = 197/217 (90%), Positives = 215/217 (99%)
Query: 135 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDYSIHRLILGTHTSD 194
RVINEE+KIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD+SIHRL+LGTHTSD
Sbjct: 15 RVINEEHKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSD 74
Query: 195 EQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMP 254
EQNHL+IASVQLPN+DAQFDAS+YD++KG+FGGFGSVSGKIEIEIKINHEGEVNRARYMP
Sbjct: 75 EQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMP 134
Query: 255 QNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYGLSWNPSLNGYLL 314
QNPC+IATKTPSSDVLVFDYTKHPSKPDP+GEC+PDLRLRGHQKEGYGLSWNP+L+G+LL
Sbjct: 135 QNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLL 194
Query: 315 SASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVE 351
SASDDHTICLWDI+A PKE +V+DAKTIFTGHTAVVE
Sbjct: 195 SASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVE 231
Score = 420 (152.9 bits), Expect = 2.3e-39, P = 2.3e-39
Identities = 76/79 (96%), Positives = 78/79 (98%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
VQWSPHNETILASSGTDRRL+VWDLSKIGEEQS EDAEDGPPELLFIHGGHTAKISDFSW
Sbjct: 323 VQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSW 382
Query: 61 NPNEPWVICSVSEDNIMQI 79
NPNEPWVICSVSEDNIMQ+
Sbjct: 383 NPNEPWVICSVSEDNIMQV 401
Score = 264 (98.0 bits), Expect = 8.3e-28, Sum P(2) = 8.3e-28
Identities = 48/56 (85%), Positives = 52/56 (92%)
Query: 88 FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRVINEEYKI 143
FDDAVEERVINEE+KIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTR +++ I
Sbjct: 8 FDDAVEERVINEEHKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSI 63
Score = 93 (37.8 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 23/79 (29%), Positives = 39/79 (49%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
+ W+P+ L S+ D + +WD+S + +E DA+ I GHTA + D SW
Sbjct: 183 LSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKT-------IFTGHTAVVEDVSW 235
Query: 61 NPNEPWVICSVSEDNIMQI 79
+ + SV++D + I
Sbjct: 236 HLLHESLFGSVADDQKLMI 254
Score = 90 (36.7 bits), Expect = 8.3e-28, Sum P(2) = 8.3e-28
Identities = 22/98 (22%), Positives = 48/98 (48%)
Query: 234 KIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK--HPSKPDPNGECHPDL 291
K+++ +H+ E+ + ++ P N ++A+ + V+D +K P+ + P+L
Sbjct: 307 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPEL 366
Query: 292 RL--RGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI 327
GH + SWNP+ + S S+D+ + +W +
Sbjct: 367 LFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQM 404
Score = 80 (33.2 bits), Expect = 9.2e-27, Sum P(2) = 9.2e-27
Identities = 28/115 (24%), Positives = 47/115 (40%)
Query: 243 HEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYG 302
H EVN + P + ++AT + V ++D K H H+ E +
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK------LHS---FESHKDEIFQ 322
Query: 303 LSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKT-------IFTGHTAVV 350
+ W+P L S+ D + +WD++ +E DA+ I GHTA +
Sbjct: 323 VQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKI 377
Score = 69 (29.3 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 22/96 (22%), Positives = 42/96 (43%)
Query: 2 QWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWN 61
++ P N I+A+ + V+D +K + + + P+L GH + SWN
Sbjct: 131 RYMPQNPCIIATKTPSSDVLVFDYTK--HPSKPDPSGECNPDLRL--RGHQKEGYGLSWN 186
Query: 62 PNEPWVICSVSEDNIMQILSVVCVEPFDDAVEERVI 97
PN + S S+D+ + + + V V+ + I
Sbjct: 187 PNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTI 222
Score = 64 (27.6 bits), Expect = 4.3e-25, Sum P(2) = 4.3e-25
Identities = 15/44 (34%), Positives = 20/44 (45%)
Query: 284 NGECHPDLRLRGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI 327
N P + H E LS+NP L + S D T+ LWD+
Sbjct: 260 NNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 303
Score = 60 (26.2 bits), Expect = 1.1e-24, Sum P(2) = 1.1e-24
Identities = 15/49 (30%), Positives = 22/49 (44%)
Query: 295 GHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI--NATPKENRVIDAKT 341
GH +SW+ S +DD + +WD N T K + +DA T
Sbjct: 225 GHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHT 273
>UNIPROTKB|Q5M7K4 [details] [associations]
symbol:rbbp4 "Histone-binding protein RBBP4" species:8364
"Xenopus (Silurana) tropicalis" [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0016568 GO:GO:0007049 GO:GO:0035098 GO:GO:0031497
GO:GO:0033186 InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:BC088588 UniGene:Str.6093
ProteinModelPortal:Q5M7K4 SMR:Q5M7K4 STRING:Q5M7K4
Xenbase:XB-GENE-482002 InParanoid:Q5M7K4 Uniprot:Q5M7K4
Length = 425
Score = 1101 (392.6 bits), Expect = 1.6e-111, P = 1.6e-111
Identities = 197/217 (90%), Positives = 214/217 (98%)
Query: 135 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDYSIHRLILGTHTSD 194
RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRP+GKD+SIHRL+LGTHTSD
Sbjct: 15 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPDGKDFSIHRLVLGTHTSD 74
Query: 195 EQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMP 254
EQNHL+IASVQLPN+DAQFDAS+YD++KG+FGGFGSVSGKIEIEIKINHEGEVNRARYMP
Sbjct: 75 EQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMP 134
Query: 255 QNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYGLSWNPSLNGYLL 314
QNPC+IATKTPSSDVLVFDYTKHPSKPDP+GEC+PDLRLRGHQKEGYGLSWNP+L+G LL
Sbjct: 135 QNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGNLL 194
Query: 315 SASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVE 351
SASDDHTICLWDI+A PKE +V+DAKTIFTGHTAVVE
Sbjct: 195 SASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVE 231
Score = 420 (152.9 bits), Expect = 2.3e-39, P = 2.3e-39
Identities = 76/79 (96%), Positives = 78/79 (98%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
VQWSPHNETILASSGTDRRL+VWDLSKIGEEQS EDAEDGPPELLFIHGGHTAKISDFSW
Sbjct: 323 VQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSW 382
Query: 61 NPNEPWVICSVSEDNIMQI 79
NPNEPWVICSVSEDNIMQ+
Sbjct: 383 NPNEPWVICSVSEDNIMQV 401
Score = 269 (99.8 bits), Expect = 5.8e-29, Sum P(2) = 5.8e-29
Identities = 49/56 (87%), Positives = 52/56 (92%)
Query: 88 FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRVINEEYKI 143
FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTR +++ I
Sbjct: 8 FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPDGKDFSI 63
Score = 93 (37.8 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 23/79 (29%), Positives = 39/79 (49%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
+ W+P+ L S+ D + +WD+S + +E DA+ I GHTA + D SW
Sbjct: 183 LSWNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKT-------IFTGHTAVVEDVSW 235
Query: 61 NPNEPWVICSVSEDNIMQI 79
+ + SV++D + I
Sbjct: 236 HLLHESLFGSVADDQKLMI 254
Score = 90 (36.7 bits), Expect = 5.8e-29, Sum P(2) = 5.8e-29
Identities = 22/98 (22%), Positives = 48/98 (48%)
Query: 234 KIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK--HPSKPDPNGECHPDL 291
K+++ +H+ E+ + ++ P N ++A+ + V+D +K P+ + P+L
Sbjct: 307 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPEL 366
Query: 292 RL--RGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI 327
GH + SWNP+ + S S+D+ + +W +
Sbjct: 367 LFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQM 404
Score = 80 (33.2 bits), Expect = 6.4e-28, Sum P(2) = 6.4e-28
Identities = 28/115 (24%), Positives = 47/115 (40%)
Query: 243 HEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYG 302
H EVN + P + ++AT + V ++D K H H+ E +
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK------LHS---FESHKDEIFQ 322
Query: 303 LSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKT-------IFTGHTAVV 350
+ W+P L S+ D + +WD++ +E DA+ I GHTA +
Sbjct: 323 VQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKI 377
Score = 69 (29.3 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 22/96 (22%), Positives = 42/96 (43%)
Query: 2 QWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWN 61
++ P N I+A+ + V+D +K + + + P+L GH + SWN
Sbjct: 131 RYMPQNPCIIATKTPSSDVLVFDYTK--HPSKPDPSGECNPDLRL--RGHQKEGYGLSWN 186
Query: 62 PNEPWVICSVSEDNIMQILSVVCVEPFDDAVEERVI 97
PN + S S+D+ + + + V V+ + I
Sbjct: 187 PNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTI 222
Score = 64 (27.6 bits), Expect = 3.0e-26, Sum P(2) = 3.0e-26
Identities = 15/44 (34%), Positives = 20/44 (45%)
Query: 284 NGECHPDLRLRGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI 327
N P + H E LS+NP L + S D T+ LWD+
Sbjct: 260 NNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 303
Score = 60 (26.2 bits), Expect = 7.9e-26, Sum P(2) = 7.9e-26
Identities = 15/49 (30%), Positives = 22/49 (44%)
Query: 295 GHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI--NATPKENRVIDAKT 341
GH +SW+ S +DD + +WD N T K + +DA T
Sbjct: 225 GHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHT 273
>FB|FBgn0263979 [details] [associations]
symbol:Caf1 "Chromatin assembly factor 1 subunit"
species:7227 "Drosophila melanogaster" [GO:0016584 "nucleosome
positioning" evidence=IDA] [GO:0042826 "histone deacetylase
binding" evidence=ISS;IDA] [GO:0031497 "chromatin assembly"
evidence=ISS;IDA] [GO:0033186 "CAF-1 complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0042393 "histone
binding" evidence=IDA;NAS;TAS] [GO:0016590 "ACF complex"
evidence=IDA] [GO:0006281 "DNA repair" evidence=TAS] [GO:0006334
"nucleosome assembly" evidence=NAS;IDA] [GO:0016573 "histone
acetylation" evidence=ISS;IDA] [GO:0016589 "NURF complex"
evidence=NAS;TAS;IPI] [GO:0035035 "histone acetyltransferase
binding" evidence=ISS;IPI] [GO:0005700 "polytene chromosome"
evidence=IDA] [GO:0042766 "nucleosome mobilization" evidence=IDA]
[GO:0006335 "DNA replication-dependent nucleosome assembly"
evidence=NAS] [GO:0003682 "chromatin binding" evidence=NAS]
[GO:0006342 "chromatin silencing" evidence=IPI] [GO:0006351
"transcription, DNA-dependent" evidence=IDA] [GO:0007346
"regulation of mitotic cell cycle" evidence=IMP] [GO:0046976
"histone methyltransferase activity (H3-K27 specific)" evidence=IC]
[GO:0046974 "histone methyltransferase activity (H3-K9 specific)"
evidence=IC] [GO:0016571 "histone methylation" evidence=IDA]
[GO:0035098 "ESC/E(Z) complex" evidence=IDA] [GO:0007307 "eggshell
chorion gene amplification" evidence=IC] [GO:0031523 "Myb complex"
evidence=IDA] [GO:0005667 "transcription factor complex"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016581 "NuRD complex" evidence=IDA] [GO:0042803 "protein
homodimerization activity" evidence=IPI] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0031491
"nucleosome binding" evidence=IDA] [GO:0042054 "histone
methyltransferase activity" evidence=IDA] [GO:0035097 "histone
methyltransferase complex" evidence=IDA] [GO:0007517 "muscle organ
development" evidence=IMP] [GO:0048813 "dendrite morphogenesis"
evidence=IMP] [GO:0048666 "neuron development" evidence=IMP]
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
[GO:0070822 "Sin3-type complex" evidence=IDA] [GO:0007379 "segment
specification" evidence=IMP] [GO:0008284 "positive regulation of
cell proliferation" evidence=IMP] [GO:0061085 "regulation of
histone H3-K27 methylation" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014297 GO:GO:0007346
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008284 GO:GO:0006281 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0006351
GO:GO:0005667 GO:GO:0000122 GO:GO:0000910 GO:GO:0048813
GO:GO:0007517 GO:GO:0035098 GO:GO:0007379 GO:GO:0006342
GO:GO:0051567 GO:GO:0042393 GO:GO:0005700 GO:GO:0042826
GO:GO:0035035 GO:GO:0042766 GO:GO:0016584 GO:GO:0006334
GO:GO:0016589 GO:GO:0033186 EMBL:U62388 EMBL:AM294392 EMBL:AM294393
EMBL:AM294394 EMBL:AM294395 EMBL:AM294396 EMBL:AM294397
EMBL:AM294398 EMBL:AM294399 EMBL:AM294400 EMBL:AM294401
EMBL:AM294402 EMBL:AM294403 EMBL:AY061408 RefSeq:NP_524354.1
UniGene:Dm.1657 PDB:2XYI PDB:2YB8 PDB:2YBA PDB:3C99 PDB:3C9C
PDBsum:2XYI PDBsum:2YB8 PDBsum:2YBA PDBsum:3C99 PDBsum:3C9C
ProteinModelPortal:Q24572 SMR:Q24572 DIP:DIP-23697N IntAct:Q24572
MINT:MINT-252601 STRING:Q24572 PaxDb:Q24572 PRIDE:Q24572
EnsemblMetazoa:FBtr0083052 GeneID:41836 KEGG:dme:Dmel_CG4236
CTD:41836 FlyBase:FBgn0263347 GeneTree:ENSGT00570000079069
InParanoid:Q24572 KO:K10752 OMA:CQPDLRL OrthoDB:EOG4ZCRKP
PhylomeDB:Q24572 EvolutionaryTrace:Q24572 GenomeRNAi:41836
NextBio:825799 Bgee:Q24572 GermOnline:CG4236 GO:GO:0031523
GO:GO:0016581 GO:GO:0070822 GO:GO:0007307 GO:GO:0070734
InterPro:IPR022052 Pfam:PF12265 Uniprot:Q24572
Length = 430
Score = 1097 (391.2 bits), Expect = 4.2e-111, P = 4.2e-111
Identities = 199/217 (91%), Positives = 210/217 (96%)
Query: 135 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDYSIHRLILGTHTSD 194
RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVT+ +GKDYS+HRLILGTHTSD
Sbjct: 19 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTKQDGKDYSVHRLILGTHTSD 78
Query: 195 EQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMP 254
EQNHLLIASVQLP+EDAQFD S+YD +KG+FGGFGSV GKIEIEIKINHEGEVNRARYMP
Sbjct: 79 EQNHLLIASVQLPSEDAQFDGSHYDNEKGEFGGFGSVCGKIEIEIKINHEGEVNRARYMP 138
Query: 255 QNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYGLSWNPSLNGYLL 314
QN CVIATKTPSSDVLVFDYTKHPSKP+P+GEC PDLRLRGHQKEGYGLSWNP+LNGYLL
Sbjct: 139 QNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLL 198
Query: 315 SASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVE 351
SASDDHTICLWDINATPKE+RVIDAK IFTGHTAVVE
Sbjct: 199 SASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVE 235
Score = 432 (157.1 bits), Expect = 1.2e-40, P = 1.2e-40
Identities = 77/79 (97%), Positives = 79/79 (100%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW
Sbjct: 327 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 386
Query: 61 NPNEPWVICSVSEDNIMQI 79
NPNEPW+ICSVSEDNIMQ+
Sbjct: 387 NPNEPWIICSVSEDNIMQV 405
Score = 273 (101.2 bits), Expect = 5.8e-30, Sum P(2) = 5.8e-30
Identities = 49/58 (84%), Positives = 53/58 (91%)
Query: 86 EPFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRVINEEYKI 143
E FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVT+ ++Y +
Sbjct: 10 ESFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTKQDGKDYSV 67
Score = 87 (35.7 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 21/79 (26%), Positives = 39/79 (49%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
+ W+P+ L S+ D + +WD++ +E DA++ I GHTA + D +W
Sbjct: 187 LSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKN-------IFTGHTAVVEDVAW 239
Query: 61 NPNEPWVICSVSEDNIMQI 79
+ + SV++D + I
Sbjct: 240 HLLHESLFGSVADDQKLMI 258
Score = 84 (34.6 bits), Expect = 5.8e-30, Sum P(2) = 5.8e-30
Identities = 28/121 (23%), Positives = 56/121 (46%)
Query: 234 KIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK--HPSKPDPNGECHPDL 291
K+++ +H+ E+ + ++ P N ++A+ + V+D +K + + P+L
Sbjct: 311 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPEL 370
Query: 292 RL--RGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI--NATPKENRVIDAKTIFTGHT 347
GH + SWNP+ + S S+D+ + +W + N E I A + T +T
Sbjct: 371 LFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAENVYNDEEPEIPASELET-NT 429
Query: 348 A 348
A
Sbjct: 430 A 430
Score = 82 (33.9 bits), Expect = 9.4e-30, Sum P(2) = 9.4e-30
Identities = 28/115 (24%), Positives = 47/115 (40%)
Query: 243 HEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYG 302
H EVN + P + ++AT + V ++D K H H+ E +
Sbjct: 276 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK------LHS---FESHKDEIFQ 326
Query: 303 LSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKT-------IFTGHTAVV 350
+ W+P L S+ D + +WD++ +E DA+ I GHTA +
Sbjct: 327 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKI 381
Score = 64 (27.6 bits), Expect = 7.2e-28, Sum P(2) = 7.2e-28
Identities = 15/44 (34%), Positives = 20/44 (45%)
Query: 284 NGECHPDLRLRGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI 327
N P + H E LS+NP L + S D T+ LWD+
Sbjct: 264 NNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 307
Score = 59 (25.8 bits), Expect = 2.4e-27, Sum P(2) = 2.4e-27
Identities = 14/49 (28%), Positives = 22/49 (44%)
Query: 295 GHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI--NATPKENRVIDAKT 341
GH ++W+ S +DD + +WD N T K + +DA T
Sbjct: 229 GHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHT 277
>UNIPROTKB|Q6INH0 [details] [associations]
symbol:rbbp4-b "Histone-binding protein RBBP4-B"
species:8355 "Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0006338 "chromatin remodeling" evidence=ISS] [GO:0031497
"chromatin assembly" evidence=ISS] [GO:0033186 "CAF-1 complex"
evidence=ISS] [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0006338 GO:GO:0007049 GO:GO:0035098
GO:GO:0031497 GO:GO:0033186 KO:K10752 InterPro:IPR022052
Pfam:PF12265 HOVERGEN:HBG053236 EMBL:BC072311 RefSeq:NP_001085185.1
UniGene:Xl.86906 ProteinModelPortal:Q6INH0 SMR:Q6INH0 PRIDE:Q6INH0
DNASU:432269 GeneID:432269 KEGG:xla:432269 CTD:432269
Xenbase:XB-GENE-6255728 Uniprot:Q6INH0
Length = 425
Score = 1096 (390.9 bits), Expect = 5.3e-111, P = 5.3e-111
Identities = 196/217 (90%), Positives = 213/217 (98%)
Query: 135 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDYSIHRLILGTHTSD 194
RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRP+GKD+SIHRL+LGTHTSD
Sbjct: 15 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPDGKDFSIHRLVLGTHTSD 74
Query: 195 EQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMP 254
EQNHL+IASVQLPN+DAQFDAS+YD++KG+FGGFGSVSGKIEIEIKINHEGEVNRARYMP
Sbjct: 75 EQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMP 134
Query: 255 QNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYGLSWNPSLNGYLL 314
QNPC+IATKTPS DVLVFDYTKHPSKPDP+GEC+PDLRLRGHQKEGYGLSWNP+L+G LL
Sbjct: 135 QNPCIIATKTPSCDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGNLL 194
Query: 315 SASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVE 351
SASDDHTICLWDI+A PKE +V+DAKTIFTGHTAVVE
Sbjct: 195 SASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVE 231
Score = 420 (152.9 bits), Expect = 2.3e-39, P = 2.3e-39
Identities = 76/79 (96%), Positives = 78/79 (98%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
VQWSPHNETILASSGTDRRL+VWDLSKIGEEQS EDAEDGPPELLFIHGGHTAKISDFSW
Sbjct: 323 VQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSW 382
Query: 61 NPNEPWVICSVSEDNIMQI 79
NPNEPWVICSVSEDNIMQ+
Sbjct: 383 NPNEPWVICSVSEDNIMQV 401
Score = 269 (99.8 bits), Expect = 5.8e-29, Sum P(2) = 5.8e-29
Identities = 49/56 (87%), Positives = 52/56 (92%)
Query: 88 FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRVINEEYKI 143
FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTR +++ I
Sbjct: 8 FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPDGKDFSI 63
Score = 93 (37.8 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 23/79 (29%), Positives = 39/79 (49%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
+ W+P+ L S+ D + +WD+S + +E DA+ I GHTA + D SW
Sbjct: 183 LSWNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKT-------IFTGHTAVVEDVSW 235
Query: 61 NPNEPWVICSVSEDNIMQI 79
+ + SV++D + I
Sbjct: 236 HLLHESLFGSVADDQKLMI 254
Score = 90 (36.7 bits), Expect = 5.8e-29, Sum P(2) = 5.8e-29
Identities = 22/98 (22%), Positives = 48/98 (48%)
Query: 234 KIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK--HPSKPDPNGECHPDL 291
K+++ +H+ E+ + ++ P N ++A+ + V+D +K P+ + P+L
Sbjct: 307 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPEL 366
Query: 292 RL--RGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI 327
GH + SWNP+ + S S+D+ + +W +
Sbjct: 367 LFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQM 404
Score = 80 (33.2 bits), Expect = 6.4e-28, Sum P(2) = 6.4e-28
Identities = 28/115 (24%), Positives = 47/115 (40%)
Query: 243 HEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYG 302
H EVN + P + ++AT + V ++D K H H+ E +
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK------LHS---FESHKDEIFQ 322
Query: 303 LSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKT-------IFTGHTAVV 350
+ W+P L S+ D + +WD++ +E DA+ I GHTA +
Sbjct: 323 VQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKI 377
Score = 64 (27.6 bits), Expect = 3.0e-26, Sum P(2) = 3.0e-26
Identities = 15/44 (34%), Positives = 20/44 (45%)
Query: 284 NGECHPDLRLRGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI 327
N P + H E LS+NP L + S D T+ LWD+
Sbjct: 260 NNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 303
Score = 60 (26.2 bits), Expect = 7.9e-26, Sum P(2) = 7.9e-26
Identities = 15/49 (30%), Positives = 22/49 (44%)
Query: 295 GHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI--NATPKENRVIDAKT 341
GH +SW+ S +DD + +WD N T K + +DA T
Sbjct: 225 GHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHT 273
>ZFIN|ZDB-GENE-030131-445 [details] [associations]
symbol:rbb4 "retinoblastoma binding protein 4"
species:7955 "Danio rerio" [GO:0033186 "CAF-1 complex"
evidence=ISS] [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0006338 "chromatin
remodeling" evidence=ISS] [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-445
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BX465206
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
IPI:IPI00995625 Ensembl:ENSDART00000130326 ArrayExpress:E7FEX2
Bgee:E7FEX2 Uniprot:E7FEX2
Length = 444
Score = 1092 (389.5 bits), Expect = 1.4e-110, P = 1.4e-110
Identities = 194/217 (89%), Positives = 212/217 (97%)
Query: 135 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDYSIHRLILGTHTSD 194
RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD+S+HRL+LGTHTSD
Sbjct: 15 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSVHRLVLGTHTSD 74
Query: 195 EQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMP 254
EQNHL+IASVQLPN+DAQFDAS+YD++KG+FGGFGSVSGKIEIEIKINHEGEVNRARYMP
Sbjct: 75 EQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMP 134
Query: 255 QNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYGLSWNPSLNGYLL 314
QNPC+IATKTP+SDVLVFDYTKHPSKPDP+GEC PDLRLRGHQKEGYGLSWNP+L+G LL
Sbjct: 135 QNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECTPDLRLRGHQKEGYGLSWNPNLSGCLL 194
Query: 315 SASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVE 351
SASDDHTICLWDI+ PKE +++DAKTIFTGHTAVVE
Sbjct: 195 SASDDHTICLWDISTVPKEGKIVDAKTIFTGHTAVVE 231
Score = 420 (152.9 bits), Expect = 2.3e-39, P = 2.3e-39
Identities = 76/79 (96%), Positives = 78/79 (98%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
VQWSPHNETILASSGTDRRL+VWDLSKIGEEQS EDAEDGPPELLFIHGGHTAKISDFSW
Sbjct: 323 VQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSW 382
Query: 61 NPNEPWVICSVSEDNIMQI 79
NPNEPWVICSVSEDNIMQ+
Sbjct: 383 NPNEPWVICSVSEDNIMQV 401
Score = 268 (99.4 bits), Expect = 1.6e-28, Sum P(2) = 1.6e-28
Identities = 48/56 (85%), Positives = 52/56 (92%)
Query: 88 FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRVINEEYKI 143
FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTR +++ +
Sbjct: 8 FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSV 63
Score = 94 (38.1 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 23/79 (29%), Positives = 39/79 (49%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
+ W+P+ L S+ D + +WD+S + +E DA+ I GHTA + D SW
Sbjct: 183 LSWNPNLSGCLLSASDDHTICLWDISTVPKEGKIVDAKT-------IFTGHTAVVEDVSW 235
Query: 61 NPNEPWVICSVSEDNIMQI 79
+ + SV++D + I
Sbjct: 236 HLLHESLFGSVADDQKLMI 254
Score = 90 (36.7 bits), Expect = 1.6e-28, Sum P(2) = 1.6e-28
Identities = 22/98 (22%), Positives = 48/98 (48%)
Query: 234 KIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK--HPSKPDPNGECHPDL 291
K+++ +H+ E+ + ++ P N ++A+ + V+D +K P+ + P+L
Sbjct: 307 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPEL 366
Query: 292 RL--RGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI 327
GH + SWNP+ + S S+D+ + +W +
Sbjct: 367 LFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQM 404
Score = 80 (33.2 bits), Expect = 1.8e-27, Sum P(2) = 1.8e-27
Identities = 28/115 (24%), Positives = 47/115 (40%)
Query: 243 HEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYG 302
H EVN + P + ++AT + V ++D K H H+ E +
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK------LHS---FESHKDEIFQ 322
Query: 303 LSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKT-------IFTGHTAVV 350
+ W+P L S+ D + +WD++ +E DA+ I GHTA +
Sbjct: 323 VQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKI 377
Score = 69 (29.3 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 22/96 (22%), Positives = 42/96 (43%)
Query: 2 QWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWN 61
++ P N I+A+ + V+D +K + + + P+L GH + SWN
Sbjct: 131 RYMPQNPCIIATKTPTSDVLVFDYTK--HPSKPDPSGECTPDLRL--RGHQKEGYGLSWN 186
Query: 62 PNEPWVICSVSEDNIMQILSVVCVEPFDDAVEERVI 97
PN + S S+D+ + + + V V+ + I
Sbjct: 187 PNLSGCLLSASDDHTICLWDISTVPKEGKIVDAKTI 222
Score = 64 (27.6 bits), Expect = 8.6e-26, Sum P(2) = 8.6e-26
Identities = 15/44 (34%), Positives = 20/44 (45%)
Query: 284 NGECHPDLRLRGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI 327
N P + H E LS+NP L + S D T+ LWD+
Sbjct: 260 NNTSKPSHAVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 303
Score = 63 (27.2 bits), Expect = 1.1e-25, Sum P(2) = 1.1e-25
Identities = 35/153 (22%), Positives = 67/153 (43%)
Query: 196 QNHLLIASVQLPNEDAQ-FDASNYDTDKGDFGGFGSVSGKIEIEIKIN-HEGEVNRARYM 253
QN +IA+ + P D FD + + + K D SG+ ++++ H+ E +
Sbjct: 135 QNPCIIAT-KTPTSDVLVFDYTKHPS-KPD------PSGECTPDLRLRGHQKEGYGLSWN 186
Query: 254 PQ-NPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLR--LRGHQKEGYGLSWNPSLN 310
P + C+++ + + ++D + P + G+ D + GH +SW+
Sbjct: 187 PNLSGCLLSASDDHT-ICLWDISTVPKE----GKI-VDAKTIFTGHTAVVEDVSWHLLHE 240
Query: 311 GYLLSASDDHTICLWDI--NATPKENRVIDAKT 341
S +DD + +WD N T K + +DA T
Sbjct: 241 SLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHT 273
>UNIPROTKB|O93377 [details] [associations]
symbol:rbbp4-a "Histone-binding protein RBBP4-A"
species:8355 "Xenopus laevis" [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0007049 GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 HOVERGEN:HBG053236 EMBL:AF073787
EMBL:BC077257 RefSeq:NP_001083811.1 UniGene:Xl.537
ProteinModelPortal:O93377 SMR:O93377 PRIDE:O93377 GeneID:399131
KEGG:xla:399131 CTD:399131 Xenbase:XB-GENE-482006 Uniprot:O93377
Length = 425
Score = 1076 (383.8 bits), Expect = 7.0e-109, P = 7.0e-109
Identities = 192/217 (88%), Positives = 212/217 (97%)
Query: 135 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDYSIHRLILGTHTSD 194
RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWL DVTRP+GKD+SIHRL+LGTHTSD
Sbjct: 15 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLSDVTRPDGKDFSIHRLVLGTHTSD 74
Query: 195 EQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMP 254
EQNHL+IASVQLPN+DAQFDAS+YD++KG+FGGFGSVSGKIEIEIKI H+GEVNRARYMP
Sbjct: 75 EQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKITHDGEVNRARYMP 134
Query: 255 QNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYGLSWNPSLNGYLL 314
QNPC+IATKTP+SDVLVFDYTKHPSKPDP+GEC+P+LRLRGHQKEGYGLSWNP+L+G LL
Sbjct: 135 QNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECNPNLRLRGHQKEGYGLSWNPNLSGNLL 194
Query: 315 SASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVE 351
SASDDHTICLWDI+A PKE +V+DAKTIFTGHTAVVE
Sbjct: 195 SASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVE 231
Score = 420 (152.9 bits), Expect = 2.3e-39, P = 2.3e-39
Identities = 76/79 (96%), Positives = 78/79 (98%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
VQWSPHNETILASSGTDRRL+VWDLSKIGEEQS EDAEDGPPELLFIHGGHTAKISDFSW
Sbjct: 323 VQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSW 382
Query: 61 NPNEPWVICSVSEDNIMQI 79
NPNEPWVICSVSEDNIMQ+
Sbjct: 383 NPNEPWVICSVSEDNIMQV 401
Score = 261 (96.9 bits), Expect = 3.0e-27, Sum P(2) = 3.0e-27
Identities = 48/56 (85%), Positives = 51/56 (91%)
Query: 88 FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRVINEEYKI 143
FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWL DVTR +++ I
Sbjct: 8 FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLSDVTRPDGKDFSI 63
Score = 93 (37.8 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 23/79 (29%), Positives = 39/79 (49%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
+ W+P+ L S+ D + +WD+S + +E DA+ I GHTA + D SW
Sbjct: 183 LSWNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKT-------IFTGHTAVVEDVSW 235
Query: 61 NPNEPWVICSVSEDNIMQI 79
+ + SV++D + I
Sbjct: 236 HLLHESLFGSVADDQKLMI 254
Score = 90 (36.7 bits), Expect = 3.0e-27, Sum P(2) = 3.0e-27
Identities = 22/98 (22%), Positives = 48/98 (48%)
Query: 234 KIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK--HPSKPDPNGECHPDL 291
K+++ +H+ E+ + ++ P N ++A+ + V+D +K P+ + P+L
Sbjct: 307 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPEL 366
Query: 292 RL--RGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI 327
GH + SWNP+ + S S+D+ + +W +
Sbjct: 367 LFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQM 404
Score = 80 (33.2 bits), Expect = 3.4e-26, Sum P(2) = 3.4e-26
Identities = 28/115 (24%), Positives = 47/115 (40%)
Query: 243 HEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYG 302
H EVN + P + ++AT + V ++D K H H+ E +
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK------LHS---FESHKDEIFQ 322
Query: 303 LSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKT-------IFTGHTAVV 350
+ W+P L S+ D + +WD++ +E DA+ I GHTA +
Sbjct: 323 VQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKI 377
Score = 64 (27.6 bits), Expect = 1.6e-24, Sum P(2) = 1.6e-24
Identities = 15/44 (34%), Positives = 20/44 (45%)
Query: 284 NGECHPDLRLRGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI 327
N P + H E LS+NP L + S D T+ LWD+
Sbjct: 260 NNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 303
Score = 60 (26.2 bits), Expect = 4.2e-24, Sum P(2) = 4.2e-24
Identities = 15/49 (30%), Positives = 22/49 (44%)
Query: 295 GHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI--NATPKENRVIDAKT 341
GH +SW+ S +DD + +WD N T K + +DA T
Sbjct: 225 GHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHT 273
>ZFIN|ZDB-GENE-030131-848 [details] [associations]
symbol:rbb4l "retinoblastoma binding protein 4,
like" species:7955 "Danio rerio" [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-030131-848 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0035098
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 HOGENOM:HOG000160330 HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC052110 EMBL:BC067546 IPI:IPI00996854
RefSeq:NP_997775.1 UniGene:Dr.75908 ProteinModelPortal:Q7ZTY4
SMR:Q7ZTY4 STRING:Q7ZTY4 PRIDE:Q7ZTY4 Ensembl:ENSDART00000008144
GeneID:322129 KEGG:dre:322129 CTD:322129 NextBio:20807686
ArrayExpress:Q7ZTY4 Bgee:Q7ZTY4 Uniprot:Q7ZTY4
Length = 426
Score = 1060 (378.2 bits), Expect = 3.5e-107, P = 3.5e-107
Identities = 188/218 (86%), Positives = 207/218 (94%)
Query: 135 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDYSIHRLILGTHTSD 194
RVINEEYKIWKKNTPFLYDLVMTHALEWPSLT QWLPDV RPEGKDY +HRL+LGTHTSD
Sbjct: 14 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVNRPEGKDYVVHRLVLGTHTSD 73
Query: 195 EQNHLLIASVQLPNEDAQFDASNYDTDKG-DFGGFGSVSGKIEIEIKINHEGEVNRARYM 253
EQNHL+IAS Q+PN+DAQFDAS+YD++KG +FGGFGSVSGKIEIEIKINHEGEVNRARYM
Sbjct: 74 EQNHLVIASAQIPNDDAQFDASHYDSEKGAEFGGFGSVSGKIEIEIKINHEGEVNRARYM 133
Query: 254 PQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYGLSWNPSLNGYL 313
PQNPC+IATKTP+SDVL FDYTKHPSKPDP+G+C PDLRLRGHQKEGYGLSWNP+L+G L
Sbjct: 134 PQNPCIIATKTPTSDVLAFDYTKHPSKPDPSGDCSPDLRLRGHQKEGYGLSWNPNLSGNL 193
Query: 314 LSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVE 351
LSASDDHTICLWDI+ PKE +++DAKTIFTGHTAVVE
Sbjct: 194 LSASDDHTICLWDISGAPKEGKIVDAKTIFTGHTAVVE 231
Score = 421 (153.3 bits), Expect = 1.8e-39, P = 1.8e-39
Identities = 76/79 (96%), Positives = 78/79 (98%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
VQWSPHNETILASSGTDRRL+VWDLSKIGEEQS EDAEDGPPELLFIHGGHTAKISDFSW
Sbjct: 323 VQWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSW 382
Query: 61 NPNEPWVICSVSEDNIMQI 79
NPNEPWVICSVSEDNIMQ+
Sbjct: 383 NPNEPWVICSVSEDNIMQV 401
Score = 261 (96.9 bits), Expect = 2.1e-26, Sum P(2) = 2.1e-26
Identities = 47/58 (81%), Positives = 51/58 (87%)
Query: 86 EPFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRVINEEYKI 143
E +DDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLT QWLPDV R ++Y +
Sbjct: 5 EVYDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVNRPEGKDYVV 62
Score = 87 (35.7 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 23/79 (29%), Positives = 38/79 (48%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
+ W+P+ L S+ D + +WD+S +E DA+ I GHTA + D SW
Sbjct: 183 LSWNPNLSGNLLSASDDHTICLWDISGAPKEGKIVDAKT-------IFTGHTAVVEDVSW 235
Query: 61 NPNEPWVICSVSEDNIMQI 79
+ + SV++D + I
Sbjct: 236 HLLHESLFGSVADDQKLMI 254
Score = 82 (33.9 bits), Expect = 2.1e-26, Sum P(2) = 2.1e-26
Identities = 21/98 (21%), Positives = 47/98 (47%)
Query: 234 KIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK--HPSKPDPNGECHPDL 291
K+++ +H+ E+ + ++ P N ++A+ + V+D +K + + P+L
Sbjct: 307 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPEL 366
Query: 292 RL--RGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI 327
GH + SWNP+ + S S+D+ + +W +
Sbjct: 367 LFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQM 404
Score = 82 (33.9 bits), Expect = 2.1e-26, Sum P(2) = 2.1e-26
Identities = 28/115 (24%), Positives = 47/115 (40%)
Query: 243 HEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYG 302
H EVN + P + ++AT + V ++D K H H+ E +
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK------LHS---FESHKDEIFQ 322
Query: 303 LSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKT-------IFTGHTAVV 350
+ W+P L S+ D + +WD++ +E DA+ I GHTA +
Sbjct: 323 VQWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKI 377
Score = 64 (27.6 bits), Expect = 1.6e-24, Sum P(2) = 1.6e-24
Identities = 15/44 (34%), Positives = 20/44 (45%)
Query: 284 NGECHPDLRLRGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI 327
N P + H E LS+NP L + S D T+ LWD+
Sbjct: 260 NNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 303
Score = 60 (26.2 bits), Expect = 4.3e-24, Sum P(2) = 4.3e-24
Identities = 15/49 (30%), Positives = 22/49 (44%)
Query: 295 GHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI--NATPKENRVIDAKT 341
GH +SW+ S +DD + +WD N T K + +DA T
Sbjct: 225 GHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHT 273
>UNIPROTKB|Q8AVH1 [details] [associations]
symbol:rbbp7 "Histone-binding protein RBBP7" species:8355
"Xenopus laevis" [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0035098 InterPro:IPR022052
Pfam:PF12265 HOVERGEN:HBG053236 CTD:5931 KO:K11659 EMBL:BC042283
RefSeq:NP_001080364.1 UniGene:Xl.55215 ProteinModelPortal:Q8AVH1
SMR:Q8AVH1 PRIDE:Q8AVH1 GeneID:380056 KEGG:xla:380056
Xenbase:XB-GENE-487913 Uniprot:Q8AVH1
Length = 425
Score = 1055 (376.4 bits), Expect = 1.2e-106, P = 1.2e-106
Identities = 185/217 (85%), Positives = 208/217 (95%)
Query: 135 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDYSIHRLILGTHTSD 194
RVINEEYKIWKKNTPFLYDLVMTHALEWPSLT QWLPDVTRPEGKDY++H L+LGTHTSD
Sbjct: 14 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVTRPEGKDYALHWLVLGTHTSD 73
Query: 195 EQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMP 254
EQNHL++A VQ+PN+DAQFDAS+YD++KG+FGGFGSVSGKIE EIKINHEGEVNRARYMP
Sbjct: 74 EQNHLVVARVQVPNDDAQFDASHYDSEKGEFGGFGSVSGKIETEIKINHEGEVNRARYMP 133
Query: 255 QNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYGLSWNPSLNGYLL 314
QNPC+IATKTPS+DVLVFDYTKHPSKPDP+GEC PDLRLRGHQKEGYGLSWN +L+G+LL
Sbjct: 134 QNPCIIATKTPSADVLVFDYTKHPSKPDPSGECSPDLRLRGHQKEGYGLSWNSNLSGHLL 193
Query: 315 SASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVE 351
SASDDHT+CLWDI+A PKE +V+DAK +FTGH+AVVE
Sbjct: 194 SASDDHTVCLWDISAGPKEGKVVDAKAVFTGHSAVVE 230
Score = 417 (151.9 bits), Expect = 4.8e-39, P = 4.8e-39
Identities = 76/79 (96%), Positives = 77/79 (97%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
V WSPHNETILASSGTDRRL+VWDLSKIGEEQS EDAEDGPPELLFIHGGHTAKISDFSW
Sbjct: 322 VHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSW 381
Query: 61 NPNEPWVICSVSEDNIMQI 79
NPNEPWVICSVSEDNIMQI
Sbjct: 382 NPNEPWVICSVSEDNIMQI 400
Score = 263 (97.6 bits), Expect = 8.5e-27, Sum P(2) = 8.5e-27
Identities = 48/60 (80%), Positives = 52/60 (86%)
Query: 86 EPFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRVINEEYKI-W 144
E F+D VEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLT QWLPDVTR ++Y + W
Sbjct: 5 EMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVTRPEGKDYALHW 64
Score = 82 (33.9 bits), Expect = 8.5e-27, Sum P(2) = 8.5e-27
Identities = 21/98 (21%), Positives = 46/98 (46%)
Query: 234 KIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK--HPSKPDPNGECHPDL 291
K+++ +H+ E+ + + P N ++A+ + V+D +K + + P+L
Sbjct: 306 KLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPEL 365
Query: 292 RL--RGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI 327
GH + SWNP+ + S S+D+ + +W +
Sbjct: 366 LFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 403
Score = 81 (33.6 bits), Expect = 1.1e-26, Sum P(2) = 1.1e-26
Identities = 28/115 (24%), Positives = 47/115 (40%)
Query: 243 HEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYG 302
H EVN + P + ++AT + V ++D K H H+ E +
Sbjct: 271 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK------LHS---FESHKDEIFQ 321
Query: 303 LSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKT-------IFTGHTAVV 350
+ W+P L S+ D + +WD++ +E DA+ I GHTA +
Sbjct: 322 VHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKI 376
Score = 62 (26.9 bits), Expect = 1.0e-24, Sum P(2) = 1.0e-24
Identities = 15/44 (34%), Positives = 20/44 (45%)
Query: 284 NGECHPDLRLRGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI 327
N P + H E LS+NP L + S D T+ LWD+
Sbjct: 259 NTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 302
Score = 60 (26.2 bits), Expect = 1.7e-24, Sum P(2) = 1.7e-24
Identities = 14/49 (28%), Positives = 22/49 (44%)
Query: 295 GHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI--NATPKENRVIDAKT 341
GH ++W+ S +DD + +WD N T K + +DA T
Sbjct: 224 GHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHT 272
>RGD|1563620 [details] [associations]
symbol:RGD1563620 "similar to retinoblastoma binding protein 4"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1563620 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00570000079069
InterPro:IPR022052 Pfam:PF12265 OrthoDB:EOG4DBTDH IPI:IPI00368073
ProteinModelPortal:D4A250 Ensembl:ENSRNOT00000033132 Uniprot:D4A250
Length = 425
Score = 1054 (376.1 bits), Expect = 1.5e-106, P = 1.5e-106
Identities = 193/218 (88%), Positives = 208/218 (95%)
Query: 135 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDYSIHRLILGTHTSD 194
RVINEEYKIWK NTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD+ IHRL+LGTHTSD
Sbjct: 15 RVINEEYKIWK-NTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFGIHRLVLGTHTSD 73
Query: 195 EQNH-LLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYM 253
EQNH L+IASVQLPN+DAQFDAS YD++KG+FGGFGSVSGKIEIEIKIN+EGEVNRARYM
Sbjct: 74 EQNHHLVIASVQLPNDDAQFDASYYDSEKGEFGGFGSVSGKIEIEIKINYEGEVNRARYM 133
Query: 254 PQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYGLSWNPSLNGYL 313
PQNPC+IATKTPSSDVLVFDYTKHPSKPDP+GEC+ DL LRGHQKEGYGLSWNP L+GYL
Sbjct: 134 PQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNSDLHLRGHQKEGYGLSWNPYLSGYL 193
Query: 314 LSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVE 351
LSASDDHTICLWDI+A PKE +V+ AKTIFTGHTAVVE
Sbjct: 194 LSASDDHTICLWDISAVPKEGKVVGAKTIFTGHTAVVE 231
Score = 420 (152.9 bits), Expect = 2.3e-39, P = 2.3e-39
Identities = 76/79 (96%), Positives = 78/79 (98%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
VQWSPHNETILASSGTDRRL+VWDLSKIGEEQS EDAEDGPPELLFIHGGHTAKISDFSW
Sbjct: 323 VQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSW 382
Query: 61 NPNEPWVICSVSEDNIMQI 79
NPNEPWVICSVSEDNIMQ+
Sbjct: 383 NPNEPWVICSVSEDNIMQV 401
Score = 245 (91.3 bits), Expect = 1.0e-24, Sum P(2) = 1.0e-24
Identities = 46/56 (82%), Positives = 50/56 (89%)
Query: 88 FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRVINEEYKI 143
F+D VEERVINEEYKIWK NTPFLYDLVMTHALEWPSLTAQWLPDVTR +++ I
Sbjct: 8 FEDVVEERVINEEYKIWK-NTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFGI 62
Score = 90 (36.7 bits), Expect = 1.0e-24, Sum P(2) = 1.0e-24
Identities = 22/98 (22%), Positives = 48/98 (48%)
Query: 234 KIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK--HPSKPDPNGECHPDL 291
K+++ +H+ E+ + ++ P N ++A+ + V+D +K P+ + P+L
Sbjct: 307 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPEL 366
Query: 292 RL--RGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI 327
GH + SWNP+ + S S+D+ + +W +
Sbjct: 367 LFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQM 404
Score = 89 (36.4 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 22/79 (27%), Positives = 38/79 (48%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
+ W+P+ L S+ D + +WD+S + +E A+ I GHTA + D SW
Sbjct: 183 LSWNPYLSGYLLSASDDHTICLWDISAVPKEGKVVGAKT-------IFTGHTAVVEDVSW 235
Query: 61 NPNEPWVICSVSEDNIMQI 79
+ + SV++D + I
Sbjct: 236 HLLHESLFGSVADDQKLMI 254
Score = 79 (32.9 bits), Expect = 1.5e-23, Sum P(2) = 1.5e-23
Identities = 27/115 (23%), Positives = 48/115 (41%)
Query: 243 HEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYG 302
+ EVN + P + ++A+ +P V ++D K H H+ E +
Sbjct: 272 YTAEVNCLSFNPNSEFILASGSPDKTVALWDLRNLKLK------LHS---FESHKDEIFQ 322
Query: 303 LSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKT-------IFTGHTAVV 350
+ W+P L S+ D + +WD++ +E DA+ I GHTA +
Sbjct: 323 VQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKI 377
Score = 70 (29.7 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 17/79 (21%), Positives = 36/79 (45%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
V W +E++ S D++L +WD + + + +TA+++ S+
Sbjct: 233 VSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVD-----------AYTAEVNCLSF 281
Query: 61 NPNEPWVICSVSEDNIMQI 79
NPN +++ S S D + +
Sbjct: 282 NPNSEFILASGSPDKTVAL 300
Score = 65 (27.9 bits), Expect = 4.2e-22, Sum P(2) = 4.2e-22
Identities = 15/44 (34%), Positives = 21/44 (47%)
Query: 284 NGECHPDLRLRGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI 327
N P + + E LS+NP+ L S S D T+ LWD+
Sbjct: 260 NNTSKPSHSVDAYTAEVNCLSFNPNSEFILASGSPDKTVALWDL 303
Score = 61 (26.5 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 33/150 (22%), Positives = 61/150 (40%)
Query: 196 QNHLLIASVQLPNEDAQ-FDASNYDTDKGDFGGFGSVSGKIEIEIKIN-HEGEVNRARYM 253
QN +IA+ + P+ D FD + + + K D SG+ ++ + H+ E +
Sbjct: 135 QNPCIIAT-KTPSSDVLVFDYTKHPS-KPD------PSGECNSDLHLRGHQKEGYGLSWN 186
Query: 254 PQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYGLSWNPSLNGYL 313
P + + + + ++D + P + G GH +SW+
Sbjct: 187 PYLSGYLLSASDDHTICLWDISAVPKEGKVVGA---KTIFTGHTAVVEDVSWHLLHESLF 243
Query: 314 LSASDDHTICLWDI--NATPKENRVIDAKT 341
S +DD + +WD N T K + +DA T
Sbjct: 244 GSVADDQKLMIWDTRSNNTSKPSHSVDAYT 273
>UNIPROTKB|Q6P315 [details] [associations]
symbol:rbbp7 "Histone-binding protein RBBP7" species:8364
"Xenopus (Silurana) tropicalis" [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
OMA:DGFLLHV HOVERGEN:HBG053236 CTD:5931 KO:K11659 EMBL:BC064219
RefSeq:NP_989285.1 UniGene:Str.17153 ProteinModelPortal:Q6P315
SMR:Q6P315 STRING:Q6P315 Ensembl:ENSXETT00000002157 GeneID:394900
KEGG:xtr:394900 Xenbase:XB-GENE-487909 InParanoid:Q6P315
Uniprot:Q6P315
Length = 425
Score = 1054 (376.1 bits), Expect = 1.5e-106, P = 1.5e-106
Identities = 185/217 (85%), Positives = 208/217 (95%)
Query: 135 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDYSIHRLILGTHTSD 194
RVINEEYKIWKKNTPFLYDLVMTHALEWPSLT QWLPDVTRPEGKDY++H L+LGTHTSD
Sbjct: 14 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVTRPEGKDYALHWLVLGTHTSD 73
Query: 195 EQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMP 254
EQNHL++A VQ+PN+DAQFDAS+YD++KG+FGGFGSVSGKIE EIKINHEGEVNRARYMP
Sbjct: 74 EQNHLVVARVQIPNDDAQFDASHYDSEKGEFGGFGSVSGKIETEIKINHEGEVNRARYMP 133
Query: 255 QNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYGLSWNPSLNGYLL 314
QNPC+IATKTPS+DVLVFDYTKHPSKPDP+G+C PDLRLRGHQKEGYGLSWN +L+G+LL
Sbjct: 134 QNPCIIATKTPSADVLVFDYTKHPSKPDPSGDCSPDLRLRGHQKEGYGLSWNSNLSGHLL 193
Query: 315 SASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVE 351
SASDDHT+CLWDI+A PKE +V+DAK IFTGH+AVVE
Sbjct: 194 SASDDHTVCLWDISAGPKEGKVVDAKAIFTGHSAVVE 230
Score = 417 (151.9 bits), Expect = 4.8e-39, P = 4.8e-39
Identities = 76/79 (96%), Positives = 77/79 (97%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
V WSPHNETILASSGTDRRL+VWDLSKIGEEQS EDAEDGPPELLFIHGGHTAKISDFSW
Sbjct: 322 VHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSW 381
Query: 61 NPNEPWVICSVSEDNIMQI 79
NPNEPWVICSVSEDNIMQI
Sbjct: 382 NPNEPWVICSVSEDNIMQI 400
Score = 263 (97.6 bits), Expect = 8.5e-27, Sum P(2) = 8.5e-27
Identities = 48/60 (80%), Positives = 52/60 (86%)
Query: 86 EPFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRVINEEYKI-W 144
E F+D VEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLT QWLPDVTR ++Y + W
Sbjct: 5 EMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVTRPEGKDYALHW 64
Score = 82 (33.9 bits), Expect = 8.5e-27, Sum P(2) = 8.5e-27
Identities = 21/98 (21%), Positives = 46/98 (46%)
Query: 234 KIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK--HPSKPDPNGECHPDL 291
K+++ +H+ E+ + + P N ++A+ + V+D +K + + P+L
Sbjct: 306 KLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPEL 365
Query: 292 RL--RGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI 327
GH + SWNP+ + S S+D+ + +W +
Sbjct: 366 LFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 403
Score = 81 (33.6 bits), Expect = 1.1e-26, Sum P(2) = 1.1e-26
Identities = 28/115 (24%), Positives = 47/115 (40%)
Query: 243 HEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYG 302
H EVN + P + ++AT + V ++D K H H+ E +
Sbjct: 271 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK------LHS---FESHKDEIFQ 321
Query: 303 LSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKT-------IFTGHTAVV 350
+ W+P L S+ D + +WD++ +E DA+ I GHTA +
Sbjct: 322 VHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKI 376
Score = 62 (26.9 bits), Expect = 1.0e-24, Sum P(2) = 1.0e-24
Identities = 15/44 (34%), Positives = 20/44 (45%)
Query: 284 NGECHPDLRLRGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI 327
N P + H E LS+NP L + S D T+ LWD+
Sbjct: 259 NTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 302
Score = 60 (26.2 bits), Expect = 1.7e-24, Sum P(2) = 1.7e-24
Identities = 14/49 (28%), Positives = 22/49 (44%)
Query: 295 GHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI--NATPKENRVIDAKT 341
GH ++W+ S +DD + +WD N T K + +DA T
Sbjct: 224 GHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHT 272
>UNIPROTKB|Q16576 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9606
"Homo sapiens" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=IDA] [GO:0030308 "negative regulation of cell growth"
evidence=IDA] [GO:0035098 "ESC/E(Z) complex" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070370 "cellular
heat acclimation" evidence=IDA] [GO:0007275 "multicellular
organismal development" evidence=TAS] [GO:0008283 "cell
proliferation" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006334 "nucleosome assembly" evidence=TAS]
[GO:0034080 "CENP-A containing nucleosome assembly at centromere"
evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0007275
Pathway_Interaction_DB:telomerasepathway Reactome:REACT_115566
GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122
GO:GO:0035098 Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0034080
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 PDB:3CFS PDB:3CFV
PDBsum:3CFS PDBsum:3CFV HOGENOM:HOG000160330 OMA:DGFLLHV
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:U35143
EMBL:X72841 EMBL:AK091911 EMBL:AL929302 IPI:IPI00395865
IPI:IPI00646512 PIR:I39181 RefSeq:NP_001185648.1 RefSeq:NP_002884.1
UniGene:Hs.495755 ProteinModelPortal:Q16576 SMR:Q16576 DIP:DIP-436N
IntAct:Q16576 MINT:MINT-90512 STRING:Q16576 PhosphoSite:Q16576
DMDM:2494891 PaxDb:Q16576 PeptideAtlas:Q16576 PRIDE:Q16576
Ensembl:ENST00000380084 Ensembl:ENST00000380087 GeneID:5931
KEGG:hsa:5931 UCSC:uc004cxt.3 GeneCards:GC0XM016772 HGNC:HGNC:9890
HPA:CAB037084 MIM:300825 neXtProt:NX_Q16576 PharmGKB:PA34254
PhylomeDB:Q16576 ChiTaRS:RBBP7 EvolutionaryTrace:Q16576
GenomeRNAi:5931 NextBio:23110 PMAP-CutDB:Q16576 ArrayExpress:Q16576
Bgee:Q16576 CleanEx:HS_RBBP7 Genevestigator:Q16576
GermOnline:ENSG00000102054 Uniprot:Q16576
Length = 425
Score = 1028 (366.9 bits), Expect = 8.6e-104, P = 8.6e-104
Identities = 180/217 (82%), Positives = 206/217 (94%)
Query: 135 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDYSIHRLILGTHTSD 194
RVINEEYKIWKKNTPFLYDLVMTHAL+WPSLT QWLP+VT+PEGKDY++H L+LGTHTSD
Sbjct: 14 RVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSD 73
Query: 195 EQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMP 254
EQNHL++A V +PN+DAQFDAS+ D+DKG+FGGFGSV+GKIE EIKINHEGEVNRARYMP
Sbjct: 74 EQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRARYMP 133
Query: 255 QNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYGLSWNPSLNGYLL 314
QNP +IATKTPSSDVLVFDYTKHP+KPDP+GEC+PDLRLRGHQKEGYGLSWN +L+G+LL
Sbjct: 134 QNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLL 193
Query: 315 SASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVE 351
SASDDHT+CLWDINA PKE +++DAK IFTGH+AVVE
Sbjct: 194 SASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVE 230
Score = 417 (151.9 bits), Expect = 4.8e-39, P = 4.8e-39
Identities = 76/79 (96%), Positives = 77/79 (97%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
V WSPHNETILASSGTDRRL+VWDLSKIGEEQS EDAEDGPPELLFIHGGHTAKISDFSW
Sbjct: 322 VHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSW 381
Query: 61 NPNEPWVICSVSEDNIMQI 79
NPNEPWVICSVSEDNIMQI
Sbjct: 382 NPNEPWVICSVSEDNIMQI 400
Score = 253 (94.1 bits), Expect = 3.7e-25, Sum P(2) = 3.7e-25
Identities = 45/60 (75%), Positives = 52/60 (86%)
Query: 86 EPFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRVINEEYKI-W 144
E F+D VEERVINEEYKIWKKNTPFLYDLVMTHAL+WPSLT QWLP+VT+ ++Y + W
Sbjct: 5 EMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHW 64
Score = 83 (34.3 bits), Expect = 3.7e-25, Sum P(2) = 3.7e-25
Identities = 21/98 (21%), Positives = 46/98 (46%)
Query: 234 KIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK--HPSKPDPNGECHPDL 291
K+++ +H+ E+ + + P N ++A+ + V+D +K + + P+L
Sbjct: 306 KLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPEL 365
Query: 292 RL--RGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI 327
GH + SWNP+ + S S+D+ + +W +
Sbjct: 366 LFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 403
Score = 81 (33.6 bits), Expect = 6.0e-25, Sum P(2) = 6.0e-25
Identities = 28/115 (24%), Positives = 47/115 (40%)
Query: 243 HEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYG 302
H EVN + P + ++AT + V ++D K H H+ E +
Sbjct: 271 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK------LHT---FESHKDEIFQ 321
Query: 303 LSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKT-------IFTGHTAVV 350
+ W+P L S+ D + +WD++ +E DA+ I GHTA +
Sbjct: 322 VHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKI 376
Score = 63 (27.2 bits), Expect = 4.5e-23, Sum P(2) = 4.5e-23
Identities = 14/49 (28%), Positives = 23/49 (46%)
Query: 295 GHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI--NATPKENRVIDAKT 341
GH ++W+ S +DD + +WD N T K + ++DA T
Sbjct: 224 GHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHT 272
Score = 61 (26.5 bits), Expect = 7.3e-23, Sum P(2) = 7.3e-23
Identities = 15/44 (34%), Positives = 20/44 (45%)
Query: 284 NGECHPDLRLRGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI 327
N P + H E LS+NP L + S D T+ LWD+
Sbjct: 259 NTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 302
>UNIPROTKB|Q4R304 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9541
"Macaca fascicularis" [GO:0016581 "NuRD complex" evidence=ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISS]
[GO:0035098 "ESC/E(Z) complex" evidence=ISS] [GO:0070370 "cellular
heat acclimation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0030308 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0035098 GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 HOVERGEN:HBG053236
EMBL:AB179464 ProteinModelPortal:Q4R304 SMR:Q4R304 PRIDE:Q4R304
Uniprot:Q4R304
Length = 425
Score = 1028 (366.9 bits), Expect = 8.6e-104, P = 8.6e-104
Identities = 180/217 (82%), Positives = 206/217 (94%)
Query: 135 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDYSIHRLILGTHTSD 194
RVINEEYKIWKKNTPFLYDLVMTHAL+WPSLT QWLP+VT+PEGKDY++H L+LGTHTSD
Sbjct: 14 RVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSD 73
Query: 195 EQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMP 254
EQNHL++A V +PN+DAQFDAS+ D+DKG+FGGFGSV+GKIE EIKINHEGEVNRARYMP
Sbjct: 74 EQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRARYMP 133
Query: 255 QNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYGLSWNPSLNGYLL 314
QNP +IATKTPSSDVLVFDYTKHP+KPDP+GEC+PDLRLRGHQKEGYGLSWN +L+G+LL
Sbjct: 134 QNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLL 193
Query: 315 SASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVE 351
SASDDHT+CLWDINA PKE +++DAK IFTGH+AVVE
Sbjct: 194 SASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVE 230
Score = 417 (151.9 bits), Expect = 4.8e-39, P = 4.8e-39
Identities = 76/79 (96%), Positives = 77/79 (97%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
V WSPHNETILASSGTDRRL+VWDLSKIGEEQS EDAEDGPPELLFIHGGHTAKISDFSW
Sbjct: 322 VHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSW 381
Query: 61 NPNEPWVICSVSEDNIMQI 79
NPNEPWVICSVSEDNIMQI
Sbjct: 382 NPNEPWVICSVSEDNIMQI 400
Score = 253 (94.1 bits), Expect = 3.7e-25, Sum P(2) = 3.7e-25
Identities = 45/60 (75%), Positives = 52/60 (86%)
Query: 86 EPFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRVINEEYKI-W 144
E F+D VEERVINEEYKIWKKNTPFLYDLVMTHAL+WPSLT QWLP+VT+ ++Y + W
Sbjct: 5 EMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHW 64
Score = 83 (34.3 bits), Expect = 3.7e-25, Sum P(2) = 3.7e-25
Identities = 21/98 (21%), Positives = 46/98 (46%)
Query: 234 KIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK--HPSKPDPNGECHPDL 291
K+++ +H+ E+ + + P N ++A+ + V+D +K + + P+L
Sbjct: 306 KLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPEL 365
Query: 292 RL--RGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI 327
GH + SWNP+ + S S+D+ + +W +
Sbjct: 366 LFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 403
Score = 81 (33.6 bits), Expect = 6.0e-25, Sum P(2) = 6.0e-25
Identities = 28/115 (24%), Positives = 47/115 (40%)
Query: 243 HEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYG 302
H EVN + P + ++AT + V ++D K H H+ E +
Sbjct: 271 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK------LHT---FESHKDEIFQ 321
Query: 303 LSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKT-------IFTGHTAVV 350
+ W+P L S+ D + +WD++ +E DA+ I GHTA +
Sbjct: 322 VHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKI 376
Score = 63 (27.2 bits), Expect = 4.5e-23, Sum P(2) = 4.5e-23
Identities = 14/49 (28%), Positives = 23/49 (46%)
Query: 295 GHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI--NATPKENRVIDAKT 341
GH ++W+ S +DD + +WD N T K + ++DA T
Sbjct: 224 GHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHT 272
Score = 61 (26.5 bits), Expect = 7.3e-23, Sum P(2) = 7.3e-23
Identities = 15/44 (34%), Positives = 20/44 (45%)
Query: 284 NGECHPDLRLRGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI 327
N P + H E LS+NP L + S D T+ LWD+
Sbjct: 259 NTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 302
>MGI|MGI:1194910 [details] [associations]
symbol:Rbbp7 "retinoblastoma binding protein 7"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=TAS] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016581
"NuRD complex" evidence=ISO;IDA] [GO:0030308 "negative regulation
of cell growth" evidence=ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0070370 "cellular heat
acclimation" evidence=ISO;ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1194910 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338 GO:GO:0000122
GO:GO:0035098 GeneTree:ENSGT00570000079069 GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 HOGENOM:HOG000160330
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:U35142
EMBL:AK076016 EMBL:AK135779 EMBL:AK135956 EMBL:AK136110
EMBL:AK145531 EMBL:AK145651 EMBL:AK146014 EMBL:AK146904
EMBL:AK146967 EMBL:AK147062 EMBL:AK148852 EMBL:AK153913
EMBL:AK160023 EMBL:AL672123 EMBL:BC003785 IPI:IPI00122698
PIR:I49367 RefSeq:NP_033057.3 UniGene:Mm.270186 UniGene:Mm.486181
ProteinModelPortal:Q60973 SMR:Q60973 IntAct:Q60973 STRING:Q60973
PhosphoSite:Q60973 REPRODUCTION-2DPAGE:Q60973 PaxDb:Q60973
PRIDE:Q60973 Ensembl:ENSMUST00000033720 GeneID:245688
KEGG:mmu:245688 InParanoid:A2AFJ0 NextBio:386918 Bgee:Q60973
CleanEx:MM_RBBP7 Genevestigator:Q60973
GermOnline:ENSMUSG00000031353 Uniprot:Q60973
Length = 425
Score = 1028 (366.9 bits), Expect = 8.6e-104, P = 8.6e-104
Identities = 180/217 (82%), Positives = 206/217 (94%)
Query: 135 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDYSIHRLILGTHTSD 194
RVINEEYKIWKKNTPFLYDLVMTHAL+WPSLT QWLP+VT+PEGKDY++H L+LGTHTSD
Sbjct: 14 RVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSD 73
Query: 195 EQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMP 254
EQNHL++A V +PN+DAQFDAS+ D+DKG+FGGFGSV+GKIE EIKINHEGEVNRARYMP
Sbjct: 74 EQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRARYMP 133
Query: 255 QNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYGLSWNPSLNGYLL 314
QNP +IATKTPSSDVLVFDYTKHP+KPDP+GEC+PDLRLRGHQKEGYGLSWN +L+G+LL
Sbjct: 134 QNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLL 193
Query: 315 SASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVE 351
SASDDHT+CLWDINA PKE +++DAK IFTGH+AVVE
Sbjct: 194 SASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVE 230
Score = 417 (151.9 bits), Expect = 4.8e-39, P = 4.8e-39
Identities = 76/79 (96%), Positives = 77/79 (97%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
V WSPHNETILASSGTDRRL+VWDLSKIGEEQS EDAEDGPPELLFIHGGHTAKISDFSW
Sbjct: 322 VHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSW 381
Query: 61 NPNEPWVICSVSEDNIMQI 79
NPNEPWVICSVSEDNIMQI
Sbjct: 382 NPNEPWVICSVSEDNIMQI 400
Score = 253 (94.1 bits), Expect = 3.7e-25, Sum P(2) = 3.7e-25
Identities = 45/60 (75%), Positives = 52/60 (86%)
Query: 86 EPFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRVINEEYKI-W 144
E F+D VEERVINEEYKIWKKNTPFLYDLVMTHAL+WPSLT QWLP+VT+ ++Y + W
Sbjct: 5 EMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHW 64
Score = 83 (34.3 bits), Expect = 3.7e-25, Sum P(2) = 3.7e-25
Identities = 21/98 (21%), Positives = 46/98 (46%)
Query: 234 KIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK--HPSKPDPNGECHPDL 291
K+++ +H+ E+ + + P N ++A+ + V+D +K + + P+L
Sbjct: 306 KLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPEL 365
Query: 292 RL--RGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI 327
GH + SWNP+ + S S+D+ + +W +
Sbjct: 366 LFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 403
Score = 81 (33.6 bits), Expect = 6.0e-25, Sum P(2) = 6.0e-25
Identities = 28/115 (24%), Positives = 47/115 (40%)
Query: 243 HEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYG 302
H EVN + P + ++AT + V ++D K H H+ E +
Sbjct: 271 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK------LHT---FESHKDEIFQ 321
Query: 303 LSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKT-------IFTGHTAVV 350
+ W+P L S+ D + +WD++ +E DA+ I GHTA +
Sbjct: 322 VHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKI 376
Score = 63 (27.2 bits), Expect = 4.5e-23, Sum P(2) = 4.5e-23
Identities = 14/49 (28%), Positives = 23/49 (46%)
Query: 295 GHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI--NATPKENRVIDAKT 341
GH ++W+ S +DD + +WD N T K + ++DA T
Sbjct: 224 GHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHT 272
Score = 61 (26.5 bits), Expect = 7.3e-23, Sum P(2) = 7.3e-23
Identities = 15/44 (34%), Positives = 20/44 (45%)
Query: 284 NGECHPDLRLRGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI 327
N P + H E LS+NP L + S D T+ LWD+
Sbjct: 259 NTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 302
>RGD|620125 [details] [associations]
symbol:Rbbp7 "retinoblastoma binding protein 7" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=ISO;ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISO;ISS]
[GO:0035098 "ESC/E(Z) complex" evidence=ISO;ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0070370 "cellular heat acclimation" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:620125 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931
KO:K11659 EMBL:AF090306 EMBL:BC062012 IPI:IPI00194285
RefSeq:NP_114004.1 UniGene:Rn.3600 ProteinModelPortal:Q71UF4
SMR:Q71UF4 STRING:Q71UF4 PRIDE:Q71UF4 Ensembl:ENSRNOT00000066676
GeneID:83712 KEGG:rno:83712 UCSC:RGD:620125 InParanoid:Q71UF4
NextBio:616281 ArrayExpress:Q71UF4 Genevestigator:Q71UF4
GermOnline:ENSRNOG00000005157 Uniprot:Q71UF4
Length = 425
Score = 1028 (366.9 bits), Expect = 8.6e-104, P = 8.6e-104
Identities = 180/217 (82%), Positives = 206/217 (94%)
Query: 135 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDYSIHRLILGTHTSD 194
RVINEEYKIWKKNTPFLYDLVMTHAL+WPSLT QWLP+VT+PEGKDY++H L+LGTHTSD
Sbjct: 14 RVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSD 73
Query: 195 EQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMP 254
EQNHL++A V +PN+DAQFDAS+ D+DKG+FGGFGSV+GKIE EIKINHEGEVNRARYMP
Sbjct: 74 EQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRARYMP 133
Query: 255 QNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYGLSWNPSLNGYLL 314
QNP +IATKTPSSDVLVFDYTKHP+KPDP+GEC+PDLRLRGHQKEGYGLSWN +L+G+LL
Sbjct: 134 QNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLL 193
Query: 315 SASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVE 351
SASDDHT+CLWDINA PKE +++DAK IFTGH+AVVE
Sbjct: 194 SASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVE 230
Score = 417 (151.9 bits), Expect = 4.8e-39, P = 4.8e-39
Identities = 76/79 (96%), Positives = 77/79 (97%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
V WSPHNETILASSGTDRRL+VWDLSKIGEEQS EDAEDGPPELLFIHGGHTAKISDFSW
Sbjct: 322 VHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSW 381
Query: 61 NPNEPWVICSVSEDNIMQI 79
NPNEPWVICSVSEDNIMQI
Sbjct: 382 NPNEPWVICSVSEDNIMQI 400
Score = 253 (94.1 bits), Expect = 3.7e-25, Sum P(2) = 3.7e-25
Identities = 45/60 (75%), Positives = 52/60 (86%)
Query: 86 EPFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRVINEEYKI-W 144
E F+D VEERVINEEYKIWKKNTPFLYDLVMTHAL+WPSLT QWLP+VT+ ++Y + W
Sbjct: 5 EMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHW 64
Score = 83 (34.3 bits), Expect = 3.7e-25, Sum P(2) = 3.7e-25
Identities = 21/98 (21%), Positives = 46/98 (46%)
Query: 234 KIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK--HPSKPDPNGECHPDL 291
K+++ +H+ E+ + + P N ++A+ + V+D +K + + P+L
Sbjct: 306 KLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPEL 365
Query: 292 RL--RGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI 327
GH + SWNP+ + S S+D+ + +W +
Sbjct: 366 LFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 403
Score = 81 (33.6 bits), Expect = 6.0e-25, Sum P(2) = 6.0e-25
Identities = 28/115 (24%), Positives = 47/115 (40%)
Query: 243 HEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYG 302
H EVN + P + ++AT + V ++D K H H+ E +
Sbjct: 271 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK------LHT---FESHKDEIFQ 321
Query: 303 LSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKT-------IFTGHTAVV 350
+ W+P L S+ D + +WD++ +E DA+ I GHTA +
Sbjct: 322 VHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKI 376
Score = 63 (27.2 bits), Expect = 4.5e-23, Sum P(2) = 4.5e-23
Identities = 14/49 (28%), Positives = 23/49 (46%)
Query: 295 GHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI--NATPKENRVIDAKT 341
GH ++W+ S +DD + +WD N T K + ++DA T
Sbjct: 224 GHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHT 272
Score = 61 (26.5 bits), Expect = 7.3e-23, Sum P(2) = 7.3e-23
Identities = 15/44 (34%), Positives = 20/44 (45%)
Query: 284 NGECHPDLRLRGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI 327
N P + H E LS+NP L + S D T+ LWD+
Sbjct: 259 NTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 302
>UNIPROTKB|Q3SWX8 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9913
"Bos taurus" [GO:0016581 "NuRD complex" evidence=ISS] [GO:0030308
"negative regulation of cell growth" evidence=ISS] [GO:0070370
"cellular heat acclimation" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 OMA:DGFLLHV HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC104613 IPI:IPI00709403
RefSeq:NP_001029810.1 UniGene:Bt.4908 ProteinModelPortal:Q3SWX8
SMR:Q3SWX8 STRING:Q3SWX8 PRIDE:Q3SWX8 Ensembl:ENSBTAT00000029923
GeneID:537402 KEGG:bta:537402 CTD:5931 InParanoid:Q3SWX8 KO:K11659
NextBio:20877129 Uniprot:Q3SWX8
Length = 425
Score = 1024 (365.5 bits), Expect = 2.3e-103, P = 2.3e-103
Identities = 179/217 (82%), Positives = 206/217 (94%)
Query: 135 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDYSIHRLILGTHTSD 194
RVINEEYKIWKKNTPFLYDLVMTHAL+WPSLT QWLP+VT+PEGKDY++H L+LGTHTSD
Sbjct: 14 RVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSD 73
Query: 195 EQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMP 254
EQNHL++A V +PN+DAQFDAS+ D++KG+FGGFGSV+GKIE EIKINHEGEVNRARYMP
Sbjct: 74 EQNHLVVARVHIPNDDAQFDASHCDSEKGEFGGFGSVTGKIECEIKINHEGEVNRARYMP 133
Query: 255 QNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYGLSWNPSLNGYLL 314
QNP +IATKTPSSDVLVFDYTKHP+KPDP+GEC+PDLRLRGHQKEGYGLSWN +L+G+LL
Sbjct: 134 QNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLL 193
Query: 315 SASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVE 351
SASDDHT+CLWDINA PKE +++DAK IFTGH+AVVE
Sbjct: 194 SASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVE 230
Score = 417 (151.9 bits), Expect = 4.8e-39, P = 4.8e-39
Identities = 76/79 (96%), Positives = 77/79 (97%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
V WSPHNETILASSGTDRRL+VWDLSKIGEEQS EDAEDGPPELLFIHGGHTAKISDFSW
Sbjct: 322 VHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSW 381
Query: 61 NPNEPWVICSVSEDNIMQI 79
NPNEPWVICSVSEDNIMQI
Sbjct: 382 NPNEPWVICSVSEDNIMQI 400
Score = 253 (94.1 bits), Expect = 3.7e-25, Sum P(2) = 3.7e-25
Identities = 45/60 (75%), Positives = 52/60 (86%)
Query: 86 EPFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRVINEEYKI-W 144
E F+D VEERVINEEYKIWKKNTPFLYDLVMTHAL+WPSLT QWLP+VT+ ++Y + W
Sbjct: 5 EMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHW 64
Score = 83 (34.3 bits), Expect = 3.7e-25, Sum P(2) = 3.7e-25
Identities = 21/98 (21%), Positives = 46/98 (46%)
Query: 234 KIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK--HPSKPDPNGECHPDL 291
K+++ +H+ E+ + + P N ++A+ + V+D +K + + P+L
Sbjct: 306 KLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPEL 365
Query: 292 RL--RGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI 327
GH + SWNP+ + S S+D+ + +W +
Sbjct: 366 LFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 403
Score = 81 (33.6 bits), Expect = 6.0e-25, Sum P(2) = 6.0e-25
Identities = 28/115 (24%), Positives = 47/115 (40%)
Query: 243 HEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYG 302
H EVN + P + ++AT + V ++D K H H+ E +
Sbjct: 271 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK------LHT---FESHKDEIFQ 321
Query: 303 LSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKT-------IFTGHTAVV 350
+ W+P L S+ D + +WD++ +E DA+ I GHTA +
Sbjct: 322 VHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKI 376
Score = 63 (27.2 bits), Expect = 4.5e-23, Sum P(2) = 4.5e-23
Identities = 14/49 (28%), Positives = 23/49 (46%)
Query: 295 GHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI--NATPKENRVIDAKT 341
GH ++W+ S +DD + +WD N T K + ++DA T
Sbjct: 224 GHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHT 272
Score = 61 (26.5 bits), Expect = 7.3e-23, Sum P(2) = 7.3e-23
Identities = 15/44 (34%), Positives = 20/44 (45%)
Query: 284 NGECHPDLRLRGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI 327
N P + H E LS+NP L + S D T+ LWD+
Sbjct: 259 NTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 302
>UNIPROTKB|E2RM49 [details] [associations]
symbol:RBBP7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
CTD:5931 KO:K11659 EMBL:AAEX03026166 RefSeq:XP_857851.1
ProteinModelPortal:E2RM49 Ensembl:ENSCAFT00000020249 GeneID:480854
KEGG:cfa:480854 NextBio:20855780 Uniprot:E2RM49
Length = 425
Score = 1024 (365.5 bits), Expect = 2.3e-103, P = 2.3e-103
Identities = 179/217 (82%), Positives = 206/217 (94%)
Query: 135 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDYSIHRLILGTHTSD 194
RVINEEYKIWKKNTPFLYDLVMTHAL+WPSLT QWLP+VT+PEGKDY++H L+LGTHTSD
Sbjct: 14 RVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSD 73
Query: 195 EQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMP 254
EQNHL++A V +PN+DAQFDAS+ D++KG+FGGFGSV+GKIE EIKINHEGEVNRARYMP
Sbjct: 74 EQNHLVVARVHIPNDDAQFDASHCDSEKGEFGGFGSVTGKIECEIKINHEGEVNRARYMP 133
Query: 255 QNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYGLSWNPSLNGYLL 314
QNP +IATKTPSSDVLVFDYTKHP+KPDP+GEC+PDLRLRGHQKEGYGLSWN +L+G+LL
Sbjct: 134 QNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLL 193
Query: 315 SASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVE 351
SASDDHT+CLWDINA PKE +++DAK IFTGH+AVVE
Sbjct: 194 SASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVE 230
Score = 417 (151.9 bits), Expect = 4.8e-39, P = 4.8e-39
Identities = 76/79 (96%), Positives = 77/79 (97%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
V WSPHNETILASSGTDRRL+VWDLSKIGEEQS EDAEDGPPELLFIHGGHTAKISDFSW
Sbjct: 322 VHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSW 381
Query: 61 NPNEPWVICSVSEDNIMQI 79
NPNEPWVICSVSEDNIMQI
Sbjct: 382 NPNEPWVICSVSEDNIMQI 400
Score = 253 (94.1 bits), Expect = 3.7e-25, Sum P(2) = 3.7e-25
Identities = 45/60 (75%), Positives = 52/60 (86%)
Query: 86 EPFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRVINEEYKI-W 144
E F+D VEERVINEEYKIWKKNTPFLYDLVMTHAL+WPSLT QWLP+VT+ ++Y + W
Sbjct: 5 EMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHW 64
Score = 83 (34.3 bits), Expect = 3.7e-25, Sum P(2) = 3.7e-25
Identities = 21/98 (21%), Positives = 46/98 (46%)
Query: 234 KIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK--HPSKPDPNGECHPDL 291
K+++ +H+ E+ + + P N ++A+ + V+D +K + + P+L
Sbjct: 306 KLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPEL 365
Query: 292 RL--RGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI 327
GH + SWNP+ + S S+D+ + +W +
Sbjct: 366 LFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 403
Score = 81 (33.6 bits), Expect = 6.0e-25, Sum P(2) = 6.0e-25
Identities = 28/115 (24%), Positives = 47/115 (40%)
Query: 243 HEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYG 302
H EVN + P + ++AT + V ++D K H H+ E +
Sbjct: 271 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK------LHT---FESHKDEIFQ 321
Query: 303 LSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKT-------IFTGHTAVV 350
+ W+P L S+ D + +WD++ +E DA+ I GHTA +
Sbjct: 322 VHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKI 376
Score = 63 (27.2 bits), Expect = 4.5e-23, Sum P(2) = 4.5e-23
Identities = 14/49 (28%), Positives = 23/49 (46%)
Query: 295 GHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI--NATPKENRVIDAKT 341
GH ++W+ S +DD + +WD N T K + ++DA T
Sbjct: 224 GHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHT 272
Score = 61 (26.5 bits), Expect = 7.3e-23, Sum P(2) = 7.3e-23
Identities = 15/44 (34%), Positives = 20/44 (45%)
Query: 284 NGECHPDLRLRGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI 327
N P + H E LS+NP L + S D T+ LWD+
Sbjct: 259 NTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 302
>UNIPROTKB|F1SQR0 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0070370 "cellular heat acclimation" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000122 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 KO:K11659 EMBL:CU463287 RefSeq:XP_003135004.1
ProteinModelPortal:F1SQR0 Ensembl:ENSSSCT00000013288
GeneID:100519001 KEGG:ssc:100519001 Uniprot:F1SQR0
Length = 425
Score = 1024 (365.5 bits), Expect = 2.3e-103, P = 2.3e-103
Identities = 179/217 (82%), Positives = 206/217 (94%)
Query: 135 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDYSIHRLILGTHTSD 194
RVINEEYKIWKKNTPFLYDLVMTHAL+WPSLT QWLP+VT+PEGKDY++H L+LGTHTSD
Sbjct: 14 RVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSD 73
Query: 195 EQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMP 254
EQNHL++A V +PN+DAQFDAS+ D++KG+FGGFGSV+GKIE EIKINHEGEVNRARYMP
Sbjct: 74 EQNHLVVARVHIPNDDAQFDASHCDSEKGEFGGFGSVTGKIECEIKINHEGEVNRARYMP 133
Query: 255 QNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYGLSWNPSLNGYLL 314
QNP +IATKTPSSDVLVFDYTKHP+KPDP+GEC+PDLRLRGHQKEGYGLSWN +L+G+LL
Sbjct: 134 QNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLL 193
Query: 315 SASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVE 351
SASDDHT+CLWDINA PKE +++DAK IFTGH+AVVE
Sbjct: 194 SASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVE 230
Score = 417 (151.9 bits), Expect = 4.8e-39, P = 4.8e-39
Identities = 76/79 (96%), Positives = 77/79 (97%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
V WSPHNETILASSGTDRRL+VWDLSKIGEEQS EDAEDGPPELLFIHGGHTAKISDFSW
Sbjct: 322 VHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSW 381
Query: 61 NPNEPWVICSVSEDNIMQI 79
NPNEPWVICSVSEDNIMQI
Sbjct: 382 NPNEPWVICSVSEDNIMQI 400
Score = 253 (94.1 bits), Expect = 3.7e-25, Sum P(2) = 3.7e-25
Identities = 45/60 (75%), Positives = 52/60 (86%)
Query: 86 EPFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRVINEEYKI-W 144
E F+D VEERVINEEYKIWKKNTPFLYDLVMTHAL+WPSLT QWLP+VT+ ++Y + W
Sbjct: 5 EMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHW 64
Score = 83 (34.3 bits), Expect = 3.7e-25, Sum P(2) = 3.7e-25
Identities = 21/98 (21%), Positives = 46/98 (46%)
Query: 234 KIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK--HPSKPDPNGECHPDL 291
K+++ +H+ E+ + + P N ++A+ + V+D +K + + P+L
Sbjct: 306 KLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPEL 365
Query: 292 RL--RGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI 327
GH + SWNP+ + S S+D+ + +W +
Sbjct: 366 LFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 403
Score = 81 (33.6 bits), Expect = 6.0e-25, Sum P(2) = 6.0e-25
Identities = 28/115 (24%), Positives = 47/115 (40%)
Query: 243 HEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYG 302
H EVN + P + ++AT + V ++D K H H+ E +
Sbjct: 271 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK------LHT---FESHKDEIFQ 321
Query: 303 LSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKT-------IFTGHTAVV 350
+ W+P L S+ D + +WD++ +E DA+ I GHTA +
Sbjct: 322 VHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKI 376
Score = 63 (27.2 bits), Expect = 4.5e-23, Sum P(2) = 4.5e-23
Identities = 14/49 (28%), Positives = 23/49 (46%)
Query: 295 GHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI--NATPKENRVIDAKT 341
GH ++W+ S +DD + +WD N T K + ++DA T
Sbjct: 224 GHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHT 272
Score = 61 (26.5 bits), Expect = 7.3e-23, Sum P(2) = 7.3e-23
Identities = 15/44 (34%), Positives = 20/44 (45%)
Query: 284 NGECHPDLRLRGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI 327
N P + H E LS+NP L + S D T+ LWD+
Sbjct: 259 NTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 302
>UNIPROTKB|E2RM67 [details] [associations]
symbol:RBBP7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070370 "cellular heat acclimation"
evidence=IEA] [GO:0035098 "ESC/E(Z) complex" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000122 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 OMA:DGFLLHV CTD:5931 KO:K11659 EMBL:AAEX03026166
GeneID:480854 KEGG:cfa:480854 NextBio:20855780 RefSeq:XP_849201.1
ProteinModelPortal:E2RM67 Ensembl:ENSCAFT00000020227 Uniprot:E2RM67
Length = 469
Score = 1024 (365.5 bits), Expect = 2.3e-103, P = 2.3e-103
Identities = 179/217 (82%), Positives = 206/217 (94%)
Query: 135 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDYSIHRLILGTHTSD 194
RVINEEYKIWKKNTPFLYDLVMTHAL+WPSLT QWLP+VT+PEGKDY++H L+LGTHTSD
Sbjct: 58 RVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSD 117
Query: 195 EQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMP 254
EQNHL++A V +PN+DAQFDAS+ D++KG+FGGFGSV+GKIE EIKINHEGEVNRARYMP
Sbjct: 118 EQNHLVVARVHIPNDDAQFDASHCDSEKGEFGGFGSVTGKIECEIKINHEGEVNRARYMP 177
Query: 255 QNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYGLSWNPSLNGYLL 314
QNP +IATKTPSSDVLVFDYTKHP+KPDP+GEC+PDLRLRGHQKEGYGLSWN +L+G+LL
Sbjct: 178 QNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLL 237
Query: 315 SASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVE 351
SASDDHT+CLWDINA PKE +++DAK IFTGH+AVVE
Sbjct: 238 SASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVE 274
Score = 417 (151.9 bits), Expect = 4.8e-39, P = 4.8e-39
Identities = 76/79 (96%), Positives = 77/79 (97%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
V WSPHNETILASSGTDRRL+VWDLSKIGEEQS EDAEDGPPELLFIHGGHTAKISDFSW
Sbjct: 366 VHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSW 425
Query: 61 NPNEPWVICSVSEDNIMQI 79
NPNEPWVICSVSEDNIMQI
Sbjct: 426 NPNEPWVICSVSEDNIMQI 444
Score = 250 (93.1 bits), Expect = 2.4e-24, Sum P(2) = 2.4e-24
Identities = 44/58 (75%), Positives = 51/58 (87%)
Query: 88 FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRVINEEYKI-W 144
F+D VEERVINEEYKIWKKNTPFLYDLVMTHAL+WPSLT QWLP+VT+ ++Y + W
Sbjct: 51 FEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHW 108
Score = 83 (34.3 bits), Expect = 2.4e-24, Sum P(2) = 2.4e-24
Identities = 21/98 (21%), Positives = 46/98 (46%)
Query: 234 KIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK--HPSKPDPNGECHPDL 291
K+++ +H+ E+ + + P N ++A+ + V+D +K + + P+L
Sbjct: 350 KLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPEL 409
Query: 292 RL--RGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI 327
GH + SWNP+ + S S+D+ + +W +
Sbjct: 410 LFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 447
Score = 81 (33.6 bits), Expect = 3.9e-24, Sum P(2) = 3.9e-24
Identities = 28/115 (24%), Positives = 47/115 (40%)
Query: 243 HEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYG 302
H EVN + P + ++AT + V ++D K H H+ E +
Sbjct: 315 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK------LHT---FESHKDEIFQ 365
Query: 303 LSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKT-------IFTGHTAVV 350
+ W+P L S+ D + +WD++ +E DA+ I GHTA +
Sbjct: 366 VHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKI 420
Score = 63 (27.2 bits), Expect = 3.0e-22, Sum P(2) = 3.0e-22
Identities = 14/49 (28%), Positives = 23/49 (46%)
Query: 295 GHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI--NATPKENRVIDAKT 341
GH ++W+ S +DD + +WD N T K + ++DA T
Sbjct: 268 GHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHT 316
Score = 61 (26.5 bits), Expect = 4.8e-22, Sum P(2) = 4.8e-22
Identities = 15/44 (34%), Positives = 20/44 (45%)
Query: 284 NGECHPDLRLRGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI 327
N P + H E LS+NP L + S D T+ LWD+
Sbjct: 303 NTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 346
>UNIPROTKB|I3LV46 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00570000079069
InterPro:IPR022052 Pfam:PF12265 OMA:DGFLLHV KO:K11659 EMBL:CU463287
GeneID:100519001 KEGG:ssc:100519001 RefSeq:XP_003360284.1
Ensembl:ENSSSCT00000024779 Uniprot:I3LV46
Length = 469
Score = 1024 (365.5 bits), Expect = 2.3e-103, P = 2.3e-103
Identities = 179/217 (82%), Positives = 206/217 (94%)
Query: 135 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDYSIHRLILGTHTSD 194
RVINEEYKIWKKNTPFLYDLVMTHAL+WPSLT QWLP+VT+PEGKDY++H L+LGTHTSD
Sbjct: 58 RVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSD 117
Query: 195 EQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMP 254
EQNHL++A V +PN+DAQFDAS+ D++KG+FGGFGSV+GKIE EIKINHEGEVNRARYMP
Sbjct: 118 EQNHLVVARVHIPNDDAQFDASHCDSEKGEFGGFGSVTGKIECEIKINHEGEVNRARYMP 177
Query: 255 QNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYGLSWNPSLNGYLL 314
QNP +IATKTPSSDVLVFDYTKHP+KPDP+GEC+PDLRLRGHQKEGYGLSWN +L+G+LL
Sbjct: 178 QNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLL 237
Query: 315 SASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVE 351
SASDDHT+CLWDINA PKE +++DAK IFTGH+AVVE
Sbjct: 238 SASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVE 274
Score = 417 (151.9 bits), Expect = 4.8e-39, P = 4.8e-39
Identities = 76/79 (96%), Positives = 77/79 (97%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
V WSPHNETILASSGTDRRL+VWDLSKIGEEQS EDAEDGPPELLFIHGGHTAKISDFSW
Sbjct: 366 VHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSW 425
Query: 61 NPNEPWVICSVSEDNIMQI 79
NPNEPWVICSVSEDNIMQI
Sbjct: 426 NPNEPWVICSVSEDNIMQI 444
Score = 250 (93.1 bits), Expect = 2.4e-24, Sum P(2) = 2.4e-24
Identities = 44/58 (75%), Positives = 51/58 (87%)
Query: 88 FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRVINEEYKI-W 144
F+D VEERVINEEYKIWKKNTPFLYDLVMTHAL+WPSLT QWLP+VT+ ++Y + W
Sbjct: 51 FEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHW 108
Score = 83 (34.3 bits), Expect = 2.4e-24, Sum P(2) = 2.4e-24
Identities = 21/98 (21%), Positives = 46/98 (46%)
Query: 234 KIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK--HPSKPDPNGECHPDL 291
K+++ +H+ E+ + + P N ++A+ + V+D +K + + P+L
Sbjct: 350 KLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPEL 409
Query: 292 RL--RGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI 327
GH + SWNP+ + S S+D+ + +W +
Sbjct: 410 LFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 447
Score = 81 (33.6 bits), Expect = 3.9e-24, Sum P(2) = 3.9e-24
Identities = 28/115 (24%), Positives = 47/115 (40%)
Query: 243 HEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYG 302
H EVN + P + ++AT + V ++D K H H+ E +
Sbjct: 315 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK------LHT---FESHKDEIFQ 365
Query: 303 LSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKT-------IFTGHTAVV 350
+ W+P L S+ D + +WD++ +E DA+ I GHTA +
Sbjct: 366 VHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKI 420
Score = 63 (27.2 bits), Expect = 3.0e-22, Sum P(2) = 3.0e-22
Identities = 14/49 (28%), Positives = 23/49 (46%)
Query: 295 GHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI--NATPKENRVIDAKT 341
GH ++W+ S +DD + +WD N T K + ++DA T
Sbjct: 268 GHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHT 316
Score = 61 (26.5 bits), Expect = 4.8e-22, Sum P(2) = 4.8e-22
Identities = 15/44 (34%), Positives = 20/44 (45%)
Query: 284 NGECHPDLRLRGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI 327
N P + H E LS+NP L + S D T+ LWD+
Sbjct: 303 NTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 346
>UNIPROTKB|Q5R654 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9601
"Pongo abelii" [GO:0016581 "NuRD complex" evidence=ISS] [GO:0030308
"negative regulation of cell growth" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] [GO:0070370 "cellular heat
acclimation" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0035098 GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 HOVERGEN:HBG053236 EMBL:CR860642 UniGene:Pab.19680
ProteinModelPortal:Q5R654 InParanoid:Q5R654 Uniprot:Q5R654
Length = 426
Score = 1020 (364.1 bits), Expect = 6.0e-103, P = 6.0e-103
Identities = 178/217 (82%), Positives = 205/217 (94%)
Query: 135 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDYSIHRLILGTHTSD 194
RVINEEYKIWKKNTPFLYDLVMTHAL+WPSLT QWLP+VT+PEGKDY++H L+LGTHTSD
Sbjct: 14 RVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSD 73
Query: 195 EQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMP 254
EQNHL++A V +PN+DAQFDAS+ D+DKG+FGGFGSV+GKIE EIKINHEGEVNRARYMP
Sbjct: 74 EQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRARYMP 133
Query: 255 QNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYGLSWNPSLNGYLL 314
QNP +IATKTPSS VLVFDYTKHP+KPDP+GEC+PDLRLRGHQKEGYGLSWN +L+G+LL
Sbjct: 134 QNPHIIATKTPSSGVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLL 193
Query: 315 SASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVE 351
SASDDHT+CLWDINA PKE +++DAK +FTGH+AVVE
Sbjct: 194 SASDDHTVCLWDINAGPKEGKIVDAKAVFTGHSAVVE 230
Score = 417 (151.9 bits), Expect = 4.8e-39, P = 4.8e-39
Identities = 76/79 (96%), Positives = 77/79 (97%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
V WSPHNETILASSGTDRRL+VWDLSKIGEEQS EDAEDGPPELLFIHGGHTAKISDFSW
Sbjct: 323 VHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSW 382
Query: 61 NPNEPWVICSVSEDNIMQI 79
NPNEPWVICSVSEDNIMQI
Sbjct: 383 NPNEPWVICSVSEDNIMQI 401
Score = 253 (94.1 bits), Expect = 3.3e-24, Sum P(2) = 3.3e-24
Identities = 45/60 (75%), Positives = 52/60 (86%)
Query: 86 EPFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRVINEEYKI-W 144
E F+D VEERVINEEYKIWKKNTPFLYDLVMTHAL+WPSLT QWLP+VT+ ++Y + W
Sbjct: 5 EMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHW 64
Score = 74 (31.1 bits), Expect = 3.3e-24, Sum P(2) = 3.3e-24
Identities = 21/99 (21%), Positives = 46/99 (46%)
Query: 234 KIEIEIKINHEGEVNRA-RYMPQNPCVIATKTPSSDVLVFDYTK--HPSKPDPNGECHPD 290
K+++ +H+ E+ + + P N ++A+ + V+D +K + + P+
Sbjct: 306 KLKLHTFESHKDEIFQVVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPE 365
Query: 291 LRL--RGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI 327
L GH + SWNP+ + S S+D+ + +W +
Sbjct: 366 LLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 404
Score = 72 (30.4 bits), Expect = 5.3e-24, Sum P(2) = 5.3e-24
Identities = 28/116 (24%), Positives = 47/116 (40%)
Query: 243 HEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYG 302
H EVN + P + ++AT + V ++D K H H+ E +
Sbjct: 271 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK------LHT---FESHKDEIFQ 321
Query: 303 L-SWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKT-------IFTGHTAVV 350
+ W+P L S+ D + +WD++ +E DA+ I GHTA +
Sbjct: 322 VVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKI 377
Score = 63 (27.2 bits), Expect = 4.6e-23, Sum P(2) = 4.6e-23
Identities = 14/49 (28%), Positives = 23/49 (46%)
Query: 295 GHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI--NATPKENRVIDAKT 341
GH ++W+ S +DD + +WD N T K + ++DA T
Sbjct: 224 GHSAVVEDVAWHLLHESLFGSVADDQKLMMWDTRSNTTSKPSHLVDAHT 272
Score = 61 (26.5 bits), Expect = 7.5e-23, Sum P(2) = 7.5e-23
Identities = 15/44 (34%), Positives = 20/44 (45%)
Query: 284 NGECHPDLRLRGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI 327
N P + H E LS+NP L + S D T+ LWD+
Sbjct: 259 NTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 302
>UNIPROTKB|Q9I8G9 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9031
"Gallus gallus" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0030308
"negative regulation of cell growth" evidence=IEA] [GO:0070370
"cellular heat acclimation" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0016581 "NuRD complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 OMA:DGFLLHV HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:AF279275 IPI:IPI00594478
PIR:JC7558 RefSeq:NP_990001.1 UniGene:Gga.202
ProteinModelPortal:Q9I8G9 SMR:Q9I8G9 STRING:Q9I8G9 PRIDE:Q9I8G9
Ensembl:ENSGALT00000026698 GeneID:395390 KEGG:gga:395390
InParanoid:Q9I8G9 NextBio:20815474 Uniprot:Q9I8G9
Length = 424
Score = 1016 (362.7 bits), Expect = 1.6e-102, P = 1.6e-102
Identities = 179/217 (82%), Positives = 204/217 (94%)
Query: 135 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDYSIHRLILGTHTSD 194
RVI+EEYKIWKKNTPFLYDLVMTHALEWPSLT QWLPDV+RPEGKDY++H L+LGTHTSD
Sbjct: 14 RVISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKDYALHWLVLGTHTSD 73
Query: 195 EQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMP 254
EQNHL++A VQ+PN+D QFD S YD++KG+FGGFGSV+GKIE EIKINHEGEVNRARYMP
Sbjct: 74 EQNHLVVARVQIPNDD-QFDTSQYDSEKGEFGGFGSVTGKIETEIKINHEGEVNRARYMP 132
Query: 255 QNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYGLSWNPSLNGYLL 314
QNP +IATKTPS+DVLVFDYTKHPSKPDP+GEC+PDLRLRGHQKEGYGLSWN +L G+LL
Sbjct: 133 QNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNSNLKGHLL 192
Query: 315 SASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVE 351
SASDDHT+CLWDI+A PKE +++DAK IFTGH+AVVE
Sbjct: 193 SASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVE 229
Score = 417 (151.9 bits), Expect = 4.8e-39, P = 4.8e-39
Identities = 76/79 (96%), Positives = 77/79 (97%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
V WSPHNETILASSGTDRRL+VWDLSKIGEEQS EDAEDGPPELLFIHGGHTAKISDFSW
Sbjct: 321 VHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSW 380
Query: 61 NPNEPWVICSVSEDNIMQI 79
NPNEPWVICSVSEDNIMQI
Sbjct: 381 NPNEPWVICSVSEDNIMQI 399
Score = 248 (92.4 bits), Expect = 2.5e-24, Sum P(2) = 2.5e-24
Identities = 45/60 (75%), Positives = 51/60 (85%)
Query: 86 EPFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRVINEEYKI-W 144
E +D VEERVI+EEYKIWKKNTPFLYDLVMTHALEWPSLT QWLPDV+R ++Y + W
Sbjct: 5 EVLEDTVEERVISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKDYALHW 64
Score = 82 (33.9 bits), Expect = 2.5e-24, Sum P(2) = 2.5e-24
Identities = 21/98 (21%), Positives = 46/98 (46%)
Query: 234 KIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK--HPSKPDPNGECHPDL 291
K+++ +H+ E+ + + P N ++A+ + V+D +K + + P+L
Sbjct: 305 KLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPEL 364
Query: 292 RL--RGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI 327
GH + SWNP+ + S S+D+ + +W +
Sbjct: 365 LFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 402
Score = 81 (33.6 bits), Expect = 3.2e-24, Sum P(2) = 3.2e-24
Identities = 28/115 (24%), Positives = 47/115 (40%)
Query: 243 HEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYG 302
H EVN + P + ++AT + V ++D K H H+ E +
Sbjct: 270 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK------LHS---FESHKDEIFQ 320
Query: 303 LSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKT-------IFTGHTAVV 350
+ W+P L S+ D + +WD++ +E DA+ I GHTA +
Sbjct: 321 VHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKI 375
Score = 62 (26.9 bits), Expect = 3.1e-22, Sum P(2) = 3.1e-22
Identities = 15/44 (34%), Positives = 20/44 (45%)
Query: 284 NGECHPDLRLRGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI 327
N P + H E LS+NP L + S D T+ LWD+
Sbjct: 258 NTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 301
Score = 60 (26.2 bits), Expect = 5.0e-22, Sum P(2) = 5.0e-22
Identities = 14/49 (28%), Positives = 22/49 (44%)
Query: 295 GHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI--NATPKENRVIDAKT 341
GH ++W+ S +DD + +WD N T K + +DA T
Sbjct: 223 GHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHT 271
>UNIPROTKB|I3LKT8 [details] [associations]
symbol:RBBP4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042826 "histone deacetylase binding" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0033186 "CAF-1
complex" evidence=IEA] [GO:0031497 "chromatin assembly"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0016581
"NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 EMBL:FP312679
EMBL:FP325261 ProteinModelPortal:I3LKT8 PRIDE:I3LKT8
Ensembl:ENSSSCT00000023350 Uniprot:I3LKT8
Length = 390
Score = 993 (354.6 bits), Expect = 4.4e-100, P = 4.4e-100
Identities = 177/196 (90%), Positives = 194/196 (98%)
Query: 156 MTHALEWPSLTAQWLPDVTRPEGKDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDA 215
MTHALEWPSLTAQWLPDVTRPEGKD+SIHRL+LGTHTSDEQNHL+IASVQLPN+DAQFDA
Sbjct: 1 MTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDA 60
Query: 216 SNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYT 275
S+YD++KG+FGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPC+IATKTPSSDVLVFDYT
Sbjct: 61 SHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYT 120
Query: 276 KHPSKPDPNGECHPDLRLRGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENR 335
KHPSKPDP+GEC+PDLRLRGHQKEGYGLSWNP+L+G+LLSASDDHTICLWDI+A PKE +
Sbjct: 121 KHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGK 180
Query: 336 VIDAKTIFTGHTAVVE 351
V+DAKTIFTGHTAVVE
Sbjct: 181 VVDAKTIFTGHTAVVE 196
Score = 420 (152.9 bits), Expect = 2.3e-39, P = 2.3e-39
Identities = 76/79 (96%), Positives = 78/79 (98%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
VQWSPHNETILASSGTDRRL+VWDLSKIGEEQS EDAEDGPPELLFIHGGHTAKISDFSW
Sbjct: 288 VQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSW 347
Query: 61 NPNEPWVICSVSEDNIMQI 79
NPNEPWVICSVSEDNIMQ+
Sbjct: 348 NPNEPWVICSVSEDNIMQV 366
Score = 118 (46.6 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 21/28 (75%), Positives = 24/28 (85%)
Query: 116 MTHALEWPSLTAQWLPDVTRVINEEYKI 143
MTHALEWPSLTAQWLPDVTR +++ I
Sbjct: 1 MTHALEWPSLTAQWLPDVTRPEGKDFSI 28
Score = 93 (37.8 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 23/79 (29%), Positives = 39/79 (49%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
+ W+P+ L S+ D + +WD+S + +E DA+ I GHTA + D SW
Sbjct: 148 LSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKT-------IFTGHTAVVEDVSW 200
Query: 61 NPNEPWVICSVSEDNIMQI 79
+ + SV++D + I
Sbjct: 201 HLLHESLFGSVADDQKLMI 219
Score = 90 (36.7 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 22/98 (22%), Positives = 48/98 (48%)
Query: 234 KIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK--HPSKPDPNGECHPDL 291
K+++ +H+ E+ + ++ P N ++A+ + V+D +K P+ + P+L
Sbjct: 272 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPEL 331
Query: 292 RL--RGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI 327
GH + SWNP+ + S S+D+ + +W +
Sbjct: 332 LFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQM 369
Score = 80 (33.2 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 28/115 (24%), Positives = 47/115 (40%)
Query: 243 HEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYG 302
H EVN + P + ++AT + V ++D K H H+ E +
Sbjct: 237 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK------LHS---FESHKDEIFQ 287
Query: 303 LSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKT-------IFTGHTAVV 350
+ W+P L S+ D + +WD++ +E DA+ I GHTA +
Sbjct: 288 VQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKI 342
Score = 69 (29.3 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 22/96 (22%), Positives = 42/96 (43%)
Query: 2 QWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWN 61
++ P N I+A+ + V+D +K + + + P+L GH + SWN
Sbjct: 96 RYMPQNPCIIATKTPSSDVLVFDYTK--HPSKPDPSGECNPDLRL--RGHQKEGYGLSWN 151
Query: 62 PNEPWVICSVSEDNIMQILSVVCVEPFDDAVEERVI 97
PN + S S+D+ + + + V V+ + I
Sbjct: 152 PNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTI 187
Score = 64 (27.6 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 15/44 (34%), Positives = 20/44 (45%)
Query: 284 NGECHPDLRLRGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI 327
N P + H E LS+NP L + S D T+ LWD+
Sbjct: 225 NNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 268
Score = 60 (26.2 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 15/49 (30%), Positives = 22/49 (44%)
Query: 295 GHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI--NATPKENRVIDAKT 341
GH +SW+ S +DD + +WD N T K + +DA T
Sbjct: 190 GHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHT 238
>UNIPROTKB|E9PC52 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 EMBL:AL929302 HGNC:HGNC:9890
ChiTaRS:RBBP7 IPI:IPI00879702 ProteinModelPortal:E9PC52 SMR:E9PC52
PRIDE:E9PC52 Ensembl:ENST00000404022 ArrayExpress:E9PC52
Bgee:E9PC52 Uniprot:E9PC52
Length = 416
Score = 962 (343.7 bits), Expect = 8.4e-97, P = 8.4e-97
Identities = 173/217 (79%), Positives = 197/217 (90%)
Query: 135 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDYSIHRLILGTHTSD 194
RVINEEYKIWKKNTPFLYDLVMTHAL+WPSLT QWLP+VT+PEGKDY++H L+LGTHTSD
Sbjct: 14 RVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSD 73
Query: 195 EQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMP 254
EQNHL++A V +PN+DAQFDAS+ D+DKG GKIE EIKINHEGEVNRARYMP
Sbjct: 74 EQNHLVVARVHIPNDDAQFDASHCDSDKG---------GKIECEIKINHEGEVNRARYMP 124
Query: 255 QNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYGLSWNPSLNGYLL 314
QNP +IATKTPSSDVLVFDYTKHP+KPDP+GEC+PDLRLRGHQKEGYGLSWN +L+G+LL
Sbjct: 125 QNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLL 184
Query: 315 SASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVE 351
SASDDHT+CLWDINA PKE +++DAK IFTGH+AVVE
Sbjct: 185 SASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVE 221
Score = 417 (151.9 bits), Expect = 4.8e-39, P = 4.8e-39
Identities = 76/79 (96%), Positives = 77/79 (97%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
V WSPHNETILASSGTDRRL+VWDLSKIGEEQS EDAEDGPPELLFIHGGHTAKISDFSW
Sbjct: 313 VHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSW 372
Query: 61 NPNEPWVICSVSEDNIMQI 79
NPNEPWVICSVSEDNIMQI
Sbjct: 373 NPNEPWVICSVSEDNIMQI 391
Score = 253 (94.1 bits), Expect = 2.9e-25, Sum P(2) = 2.9e-25
Identities = 45/60 (75%), Positives = 52/60 (86%)
Query: 86 EPFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRVINEEYKI-W 144
E F+D VEERVINEEYKIWKKNTPFLYDLVMTHAL+WPSLT QWLP+VT+ ++Y + W
Sbjct: 5 EMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHW 64
Score = 83 (34.3 bits), Expect = 2.9e-25, Sum P(2) = 2.9e-25
Identities = 21/98 (21%), Positives = 46/98 (46%)
Query: 234 KIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK--HPSKPDPNGECHPDL 291
K+++ +H+ E+ + + P N ++A+ + V+D +K + + P+L
Sbjct: 297 KLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPEL 356
Query: 292 RL--RGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI 327
GH + SWNP+ + S S+D+ + +W +
Sbjct: 357 LFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 394
Score = 81 (33.6 bits), Expect = 4.8e-25, Sum P(2) = 4.8e-25
Identities = 28/115 (24%), Positives = 47/115 (40%)
Query: 243 HEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYG 302
H EVN + P + ++AT + V ++D K H H+ E +
Sbjct: 262 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK------LHT---FESHKDEIFQ 312
Query: 303 LSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKT-------IFTGHTAVV 350
+ W+P L S+ D + +WD++ +E DA+ I GHTA +
Sbjct: 313 VHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKI 367
Score = 63 (27.2 bits), Expect = 3.6e-23, Sum P(2) = 3.6e-23
Identities = 14/49 (28%), Positives = 23/49 (46%)
Query: 295 GHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI--NATPKENRVIDAKT 341
GH ++W+ S +DD + +WD N T K + ++DA T
Sbjct: 215 GHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHT 263
Score = 61 (26.5 bits), Expect = 5.8e-23, Sum P(2) = 5.8e-23
Identities = 15/44 (34%), Positives = 20/44 (45%)
Query: 284 NGECHPDLRLRGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI 327
N P + H E LS+NP L + S D T+ LWD+
Sbjct: 250 NTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 293
>UNIPROTKB|K7GRD3 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GeneTree:ENSGT00570000079069 InterPro:IPR022052
Pfam:PF12265 EMBL:CU463287 Ensembl:ENSSSCT00000034836
Uniprot:K7GRD3
Length = 416
Score = 958 (342.3 bits), Expect = 2.2e-96, P = 2.2e-96
Identities = 172/217 (79%), Positives = 197/217 (90%)
Query: 135 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDYSIHRLILGTHTSD 194
RVINEEYKIWKKNTPFLYDLVMTHAL+WPSLT QWLP+VT+PEGKDY++H L+LGTHTSD
Sbjct: 14 RVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSD 73
Query: 195 EQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMP 254
EQNHL++A V +PN+DAQFDAS+ D++KG GKIE EIKINHEGEVNRARYMP
Sbjct: 74 EQNHLVVARVHIPNDDAQFDASHCDSEKG---------GKIECEIKINHEGEVNRARYMP 124
Query: 255 QNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYGLSWNPSLNGYLL 314
QNP +IATKTPSSDVLVFDYTKHP+KPDP+GEC+PDLRLRGHQKEGYGLSWN +L+G+LL
Sbjct: 125 QNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLL 184
Query: 315 SASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVE 351
SASDDHT+CLWDINA PKE +++DAK IFTGH+AVVE
Sbjct: 185 SASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVE 221
Score = 417 (151.9 bits), Expect = 4.8e-39, P = 4.8e-39
Identities = 76/79 (96%), Positives = 77/79 (97%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
V WSPHNETILASSGTDRRL+VWDLSKIGEEQS EDAEDGPPELLFIHGGHTAKISDFSW
Sbjct: 313 VHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSW 372
Query: 61 NPNEPWVICSVSEDNIMQI 79
NPNEPWVICSVSEDNIMQI
Sbjct: 373 NPNEPWVICSVSEDNIMQI 391
Score = 253 (94.1 bits), Expect = 2.9e-25, Sum P(2) = 2.9e-25
Identities = 45/60 (75%), Positives = 52/60 (86%)
Query: 86 EPFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRVINEEYKI-W 144
E F+D VEERVINEEYKIWKKNTPFLYDLVMTHAL+WPSLT QWLP+VT+ ++Y + W
Sbjct: 5 EMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHW 64
Score = 83 (34.3 bits), Expect = 2.9e-25, Sum P(2) = 2.9e-25
Identities = 21/98 (21%), Positives = 46/98 (46%)
Query: 234 KIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK--HPSKPDPNGECHPDL 291
K+++ +H+ E+ + + P N ++A+ + V+D +K + + P+L
Sbjct: 297 KLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPEL 356
Query: 292 RL--RGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI 327
GH + SWNP+ + S S+D+ + +W +
Sbjct: 357 LFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 394
Score = 81 (33.6 bits), Expect = 4.8e-25, Sum P(2) = 4.8e-25
Identities = 28/115 (24%), Positives = 47/115 (40%)
Query: 243 HEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYG 302
H EVN + P + ++AT + V ++D K H H+ E +
Sbjct: 262 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK------LHT---FESHKDEIFQ 312
Query: 303 LSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKT-------IFTGHTAVV 350
+ W+P L S+ D + +WD++ +E DA+ I GHTA +
Sbjct: 313 VHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKI 367
Score = 63 (27.2 bits), Expect = 3.6e-23, Sum P(2) = 3.6e-23
Identities = 14/49 (28%), Positives = 23/49 (46%)
Query: 295 GHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI--NATPKENRVIDAKT 341
GH ++W+ S +DD + +WD N T K + ++DA T
Sbjct: 215 GHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHT 263
Score = 61 (26.5 bits), Expect = 5.8e-23, Sum P(2) = 5.8e-23
Identities = 15/44 (34%), Positives = 20/44 (45%)
Query: 284 NGECHPDLRLRGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI 327
N P + H E LS+NP L + S D T+ LWD+
Sbjct: 250 NTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 293
>UNIPROTKB|K7GKX8 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GeneTree:ENSGT00570000079069
InterPro:IPR022052 Pfam:PF12265 EMBL:CU463287
Ensembl:ENSSSCT00000032853 Uniprot:K7GKX8
Length = 254
Score = 944 (337.4 bits), Expect = 6.8e-95, P = 6.8e-95
Identities = 165/197 (83%), Positives = 188/197 (95%)
Query: 135 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDYSIHRLILGTHTSD 194
RVINEEYKIWKKNTPFLYDLVMTHAL+WPSLT QWLP+VT+PEGKDY++H L+LGTHTSD
Sbjct: 58 RVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSD 117
Query: 195 EQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMP 254
EQNHL++A V +PN+DAQFDAS+ D++KG+FGGFGSV+GKIE EIKINHEGEVNRARYMP
Sbjct: 118 EQNHLVVARVHIPNDDAQFDASHCDSEKGEFGGFGSVTGKIECEIKINHEGEVNRARYMP 177
Query: 255 QNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYGLSWNPSLNGYLL 314
QNP +IATKTPSSDVLVFDYTKHP+KPDP+GEC+PDLRLRGHQKEGYGLSWN +L+G+LL
Sbjct: 178 QNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLL 237
Query: 315 SASDDHTICLWDINATP 331
SASDDHT+CLWDINA P
Sbjct: 238 SASDDHTVCLWDINAGP 254
Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 44/58 (75%), Positives = 51/58 (87%)
Query: 88 FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRVINEEYKI-W 144
F+D VEERVINEEYKIWKKNTPFLYDLVMTHAL+WPSLT QWLP+VT+ ++Y + W
Sbjct: 51 FEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHW 108
>UNIPROTKB|Q61Y48 [details] [associations]
symbol:lin-53 "Probable histone-binding protein lin-53"
species:6238 "Caenorhabditis briggsae" [GO:0005634 "nucleus"
evidence=ISS] [GO:0009790 "embryo development" evidence=ISS]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0040035 "hermaphrodite genitalia development"
evidence=ISS] [GO:0042826 "histone deacetylase binding"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0017053 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0040035 GO:GO:0042826
InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330 EMBL:HE600990
ProteinModelPortal:Q61Y48 SMR:Q61Y48 STRING:Q61Y48 PRIDE:Q61Y48
EnsemblMetazoa:CBG03710 WormBase:CBG03710 Uniprot:Q61Y48
Length = 416
Score = 812 (290.9 bits), Expect = 6.6e-81, P = 6.6e-81
Identities = 144/217 (66%), Positives = 179/217 (82%)
Query: 135 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDYSIHRLILGTHTSD 194
RV N+EYKIWKKNTPFLYDLVMTHALEWPSL+ QWLP++ + E D+++HRLILGTHTSD
Sbjct: 12 RVANDEYKIWKKNTPFLYDLVMTHALEWPSLSVQWLPEIEK-ESSDHTVHRLILGTHTSD 70
Query: 195 EQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMP 254
EQNHLLI+ + +P ++AQFDAS YDT++G+FGGFG+V+GK+E +I+INHEGEVNRARYMP
Sbjct: 71 EQNHLLISKICMPTDEAQFDASRYDTERGEFGGFGAVNGKVEPDIRINHEGEVNRARYMP 130
Query: 255 QNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYGLSWNPSLNGYLL 314
Q P +IATK+PS+DV +FDYTK+PS P N +P L+L+GH KEGYGLSWNP+ G +L
Sbjct: 131 QKPTIIATKSPSADVYIFDYTKYPSVPKDN-TFNPLLKLKGHTKEGYGLSWNPNKEGLIL 189
Query: 315 SASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVE 351
SASDD T+C WDIN N + A+ IF GH +VVE
Sbjct: 190 SASDDQTVCHWDINGNAGANGELKAREIFKGHESVVE 226
Score = 415 (151.1 bits), Expect = 7.8e-39, P = 7.8e-39
Identities = 72/79 (91%), Positives = 78/79 (98%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
VQWSPHNETILASSGTD+RLHVWDLSKIGE+Q+ EDAEDGPPELLFIHGGHTAKISDFSW
Sbjct: 315 VQWSPHNETILASSGTDKRLHVWDLSKIGEDQTAEDAEDGPPELLFIHGGHTAKISDFSW 374
Query: 61 NPNEPWVICSVSEDNIMQI 79
NPNEPWV+CSVSEDNI+Q+
Sbjct: 375 NPNEPWVVCSVSEDNILQV 393
Score = 208 (78.3 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 35/47 (74%), Positives = 41/47 (87%)
Query: 89 DDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTR 135
D E+RV N+EYKIWKKNTPFLYDLVMTHALEWPSL+ QWLP++ +
Sbjct: 6 DGTSEDRVANDEYKIWKKNTPFLYDLVMTHALEWPSLSVQWLPEIEK 52
Score = 80 (33.2 bits), Expect = 0.00074, Sum P(2) = 0.00074
Identities = 22/73 (30%), Positives = 37/73 (50%)
Query: 2 QWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWN 61
++ P TI+A+ ++++D +K +D P LL + G HT + SWN
Sbjct: 127 RYMPQKPTIIATKSPSADVYIFDYTKY--PSVPKDNTFNP--LLKLKG-HTKEGYGLSWN 181
Query: 62 PNEPWVICSVSED 74
PN+ +I S S+D
Sbjct: 182 PNKEGLILSASDD 194
Score = 79 (32.9 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 20/90 (22%), Positives = 42/90 (46%)
Query: 242 NHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK--HPSKPDPNGECHPDLRL--RGHQ 297
+H E+ + ++ P N ++A+ + V+D +K + + P+L GH
Sbjct: 307 SHRDEIFQVQWSPHNETILASSGTDKRLHVWDLSKIGEDQTAEDAEDGPPELLFIHGGHT 366
Query: 298 KEGYGLSWNPSLNGYLLSASDDHTICLWDI 327
+ SWNP+ + S S+D+ + +W +
Sbjct: 367 AKISDFSWNPNEPWVVCSVSEDNILQVWQM 396
Score = 78 (32.5 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
Identities = 27/115 (23%), Positives = 47/115 (40%)
Query: 243 HEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYG 302
H EVN + P + ++AT + V ++D K H H+ E +
Sbjct: 264 HSAEVNCLAFNPYSEFILATGSADKTVALWDLRNLRLK------LHS---FESHRDEIFQ 314
Query: 303 LSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKT-------IFTGHTAVV 350
+ W+P L S+ D + +WD++ ++ DA+ I GHTA +
Sbjct: 315 VQWSPHNETILASSGTDKRLHVWDLSKIGEDQTAEDAEDGPPELLFIHGGHTAKI 369
Score = 66 (28.3 bits), Expect = 2.5e-17, Sum P(2) = 2.5e-17
Identities = 16/56 (28%), Positives = 25/56 (44%)
Query: 284 NGECHPDLRLRGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDA 339
NGE +GH+ ++W+ +G S DD + +WD+ T IDA
Sbjct: 209 NGELKAREIFKGHESVVEDVAWHVLHDGVFGSVGDDKKLLIWDLR-TNVPGHAIDA 263
Score = 61 (26.5 bits), Expect = 8.4e-17, Sum P(2) = 8.4e-17
Identities = 29/124 (23%), Positives = 49/124 (39%)
Query: 207 PNEDAQF-DASNYDTD-KGDFGGFGSVSGKIEI-EIKINHEGEVNRARYMPQNPCVIATK 263
PN++ AS+ T D G +G+++ EI HE V + + V +
Sbjct: 182 PNKEGLILSASDDQTVCHWDINGNAGANGELKAREIFKGHESVVEDVAWHVLHDGVFGSV 241
Query: 264 TPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYGLSWNPSLNGYLLSASDDHTIC 323
+L++D + P + H E L++NP L + S D T+
Sbjct: 242 GDDKKLLIWDLRTNV----------PGHAIDAHSAEVNCLAFNPYSEFILATGSADKTVA 291
Query: 324 LWDI 327
LWD+
Sbjct: 292 LWDL 295
>TAIR|locus:2161253 [details] [associations]
symbol:MSI1 "MULTICOPY SUPRESSOR OF IRA1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0007275 "multicellular organismal development" evidence=IMP]
[GO:0016568 "chromatin modification" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0043234 "protein complex"
evidence=IPI] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009793
"embryo development ending in seed dormancy" evidence=IMP]
[GO:0031507 "heterochromatin assembly" evidence=RCA;IMP]
[GO:0009909 "regulation of flower development" evidence=RCA;IMP]
[GO:0008283 "cell proliferation" evidence=IMP] [GO:0010026
"trichome differentiation" evidence=IMP] [GO:0048366 "leaf
development" evidence=IMP] [GO:0010214 "seed coat development"
evidence=IMP] [GO:0048316 "seed development" evidence=IMP]
[GO:0009555 "pollen development" evidence=IGI;IMP] [GO:0045787
"positive regulation of cell cycle" evidence=IGI;RCA] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=ISS] [GO:0006349
"regulation of gene expression by genetic imprinting" evidence=IPI]
[GO:0006275 "regulation of DNA replication" evidence=RCA]
[GO:0009965 "leaf morphogenesis" evidence=RCA] [GO:0010389
"regulation of G2/M transition of mitotic cell cycle" evidence=RCA]
[GO:0016570 "histone modification" evidence=RCA] [GO:0048449
"floral organ formation" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009507 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0009555 GO:GO:0010214 GO:GO:0008283
GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 EMBL:AB019228 GO:GO:0009793 GO:GO:0009908
GO:GO:0048366 GO:GO:0009909 GO:GO:0006349 GO:GO:0016585
GO:GO:0045787 GO:GO:0031507 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0080008 GO:GO:0010026 HOGENOM:HOG000160330
OMA:DGFLLHV EMBL:AF016846 EMBL:AY059874 EMBL:AY114646
IPI:IPI00535841 RefSeq:NP_200631.1 UniGene:At.49185
UniGene:At.66738 ProteinModelPortal:O22467 SMR:O22467
DIP:DIP-33481N IntAct:O22467 STRING:O22467 PaxDb:O22467
PRIDE:O22467 EnsemblPlants:AT5G58230.1 GeneID:835935
KEGG:ath:AT5G58230 GeneFarm:2813 TAIR:At5g58230 InParanoid:O22467
PhylomeDB:O22467 ProtClustDB:CLSN2683757 Genevestigator:O22467
GermOnline:AT5G58230 Uniprot:O22467
Length = 424
Score = 798 (286.0 bits), Expect = 2.0e-79, P = 2.0e-79
Identities = 143/218 (65%), Positives = 176/218 (80%)
Query: 135 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDYSIHRLILGTHTSD 194
R+INEEYKIWKKNTPFLYDLV+THALEWPSLT +WLPD P GKDYS+ ++ILGTHTS+
Sbjct: 15 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPSGKDYSVQKMILGTHTSE 74
Query: 195 -EQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYM 253
E N+L++A VQLP +D + +A YD D+ +FGGFG +GK++I +INH+GEVNRARYM
Sbjct: 75 SEPNYLMLAQVQLPLDDTESEARQYDDDRSEFGGFGCATGKVQIIQQINHDGEVNRARYM 134
Query: 254 PQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYGLSWNPSLNGYL 313
PQNP +IATKT +++V VFDY+KHPSKP +G C+PDL+LRGH EGYGLSW+ G+L
Sbjct: 135 PQNPFIIATKTVNAEVYVFDYSKHPSKPPLDGACNPDLKLRGHSSEGYGLSWSKFKQGHL 194
Query: 314 LSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVE 351
LS SDD ICLWDINATPK N+ +DA+ IF H VVE
Sbjct: 195 LSGSDDAQICLWDINATPK-NKSLDAQQIFKAHEGVVE 231
Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
Identities = 61/79 (77%), Positives = 67/79 (84%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
V W+P NETILAS RRL VWDLS+I EEQ+ EDAEDGPPELLFIHGGHT+KISDFSW
Sbjct: 323 VGWNPKNETILASCCLGRRLMVWDLSRIDEEQTVEDAEDGPPELLFIHGGHTSKISDFSW 382
Query: 61 NPNEPWVICSVSEDNIMQI 79
NP E WVI SV+EDNI+QI
Sbjct: 383 NPCEDWVISSVAEDNILQI 401
Score = 224 (83.9 bits), Expect = 3.1e-22, Sum P(2) = 3.1e-22
Identities = 52/103 (50%), Positives = 64/103 (62%)
Query: 92 VEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRVINEEYKIWKKNTPFL 151
+EER+INEEYKIWKKNTPFLYDLV+THALEWPSLT +WLPD ++Y + K
Sbjct: 12 IEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPSGKDYSVQKM----- 66
Query: 152 YDLVMTHALEW-PS--LTAQ-WLP-DVTRPEGKDYSIHRLILG 189
++ TH E P+ + AQ LP D T E + Y R G
Sbjct: 67 --ILGTHTSESEPNYLMLAQVQLPLDDTESEARQYDDDRSEFG 107
Score = 94 (38.1 bits), Expect = 3.1e-22, Sum P(2) = 3.1e-22
Identities = 29/111 (26%), Positives = 47/111 (42%)
Query: 230 SVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHP 289
S S ++ + H EVN + P N V+AT + V +FD K + H
Sbjct: 259 SPSASKPVQSVVAHSMEVNCLAFNPFNEWVVATGSTDKTVKLFDLRKLSTA------LHT 312
Query: 290 DLRLRGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAK 340
H++E + + WNP L S + +WD++ +E V DA+
Sbjct: 313 ---FDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTVEDAE 360
Score = 73 (30.8 bits), Expect = 4.8e-20, Sum P(2) = 4.8e-20
Identities = 19/90 (21%), Positives = 45/90 (50%)
Query: 242 NHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKP--DPNGECHPDLRL--RGHQ 297
+H+ EV + + P+N ++A+ ++V+D ++ + + + P+L GH
Sbjct: 315 SHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTVEDAEDGPPELLFIHGGHT 374
Query: 298 KEGYGLSWNPSLNGYLLSASDDHTICLWDI 327
+ SWNP + + S ++D+ + +W +
Sbjct: 375 SKISDFSWNPCEDWVISSVAEDNILQIWQM 404
Score = 68 (29.0 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 18/79 (22%), Positives = 35/79 (44%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
+ WS + L S D ++ +WD++ + +S DA+ I H + D +W
Sbjct: 184 LSWSKFKQGHLLSGSDDAQICLWDINATPKNKSL-DAQQ-------IFKAHEGVVEDVAW 235
Query: 61 NPNEPWVICSVSEDNIMQI 79
+ ++ SV +D + I
Sbjct: 236 HLRHEYLFGSVGDDQYLLI 254
Score = 43 (20.2 bits), Expect = 6.3e-17, Sum P(2) = 6.3e-17
Identities = 10/47 (21%), Positives = 24/47 (51%)
Query: 294 RGHQKEGYGLSWNPSLNGYLL-SASDDHTICLWDINATPKENRVIDA 339
+ H+ ++W+ + YL S DD + +WD+ + P ++ + +
Sbjct: 224 KAHEGVVEDVAWHLR-HEYLFGSVGDDQYLLIWDLRS-PSASKPVQS 268
>WB|WBGene00003036 [details] [associations]
symbol:lin-53 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040027
"negative regulation of vulval development" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0048557
"embryonic digestive tract morphogenesis" evidence=IGI] [GO:0005634
"nucleus" evidence=IDA] [GO:0045138 "tail tip morphogenesis"
evidence=IMP] [GO:0001708 "cell fate specification" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070176 "DRM
complex" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0001708 GO:GO:0009792 GO:GO:0006915
GO:GO:0045892 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0040035 GO:GO:0045138 GO:GO:0040027
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0048557 HOGENOM:HOG000160330 EMBL:AF116530
EMBL:Z81097 EMBL:AL023833 PIR:T23391 RefSeq:NP_492552.1
UniGene:Cel.19610 ProteinModelPortal:P90916 SMR:P90916
IntAct:P90916 MINT:MINT-114323 STRING:P90916 PaxDb:P90916
EnsemblMetazoa:K07A1.12.1 EnsemblMetazoa:K07A1.12.2 GeneID:172802
KEGG:cel:CELE_K07A1.12 UCSC:K07A1.12.1 CTD:172802 WormBase:K07A1.12
InParanoid:P90916 OMA:DGFLLHV NextBio:877063 GO:GO:0070176
Uniprot:P90916
Length = 417
Score = 785 (281.4 bits), Expect = 4.8e-78, P = 4.8e-78
Identities = 141/217 (64%), Positives = 174/217 (80%)
Query: 135 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDYSIHRLILGTHTSD 194
RV N+EYKIWKKNTPFLYDLVMTHALEWPSL+ QWLPDV + + D++IHRLILGTHTSD
Sbjct: 12 RVANDEYKIWKKNTPFLYDLVMTHALEWPSLSVQWLPDVAK-DNSDHTIHRLILGTHTSD 70
Query: 195 EQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMP 254
EQNHLLI+ + +P +DAQFDAS YDT++ ++GGFG+V+GK+E +I+INHEGEVNRARYMP
Sbjct: 71 EQNHLLISKICMPTDDAQFDASRYDTERSEYGGFGAVNGKVEPDIRINHEGEVNRARYMP 130
Query: 255 QNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYGLSWNPSLNGYLL 314
Q +IATK+P +DV +FDY KH + P N +P +RL+GH KEGYGLSWNP+ G +L
Sbjct: 131 QKSNIIATKSPHADVYIFDYLKHSAVPRDN-TFNPLIRLKGHTKEGYGLSWNPNKEGLIL 189
Query: 315 SASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVE 351
SASDD T+C WDINA + AK +F GH +VVE
Sbjct: 190 SASDDQTVCHWDINANQNVAGELQAKDVFKGHESVVE 226
Score = 418 (152.2 bits), Expect = 3.7e-39, P = 3.7e-39
Identities = 73/79 (92%), Positives = 78/79 (98%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
VQWSPHNETILASSGTD+RLHVWDLSKIGE+QS EDAEDGPPELLFIHGGHTAKISDFSW
Sbjct: 315 VQWSPHNETILASSGTDKRLHVWDLSKIGEDQSAEDAEDGPPELLFIHGGHTAKISDFSW 374
Query: 61 NPNEPWVICSVSEDNIMQI 79
NPNEPWV+CSVSEDNI+Q+
Sbjct: 375 NPNEPWVVCSVSEDNILQV 393
Score = 215 (80.7 bits), Expect = 1.1e-19, Sum P(2) = 1.1e-19
Identities = 39/55 (70%), Positives = 45/55 (81%)
Query: 89 DDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRVINEEYKI 143
D E+RV N+EYKIWKKNTPFLYDLVMTHALEWPSL+ QWLPDV + N ++ I
Sbjct: 6 DGTSEDRVANDEYKIWKKNTPFLYDLVMTHALEWPSLSVQWLPDVAKD-NSDHTI 59
Score = 80 (33.2 bits), Expect = 1.1e-19, Sum P(2) = 1.1e-19
Identities = 20/90 (22%), Positives = 42/90 (46%)
Query: 242 NHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK--HPSKPDPNGECHPDLRL--RGHQ 297
+H E+ + ++ P N ++A+ + V+D +K + + P+L GH
Sbjct: 307 SHRDEIFQVQWSPHNETILASSGTDKRLHVWDLSKIGEDQSAEDAEDGPPELLFIHGGHT 366
Query: 298 KEGYGLSWNPSLNGYLLSASDDHTICLWDI 327
+ SWNP+ + S S+D+ + +W +
Sbjct: 367 AKISDFSWNPNEPWVVCSVSEDNILQVWQM 396
Score = 79 (32.9 bits), Expect = 1.5e-19, Sum P(2) = 1.5e-19
Identities = 27/115 (23%), Positives = 47/115 (40%)
Query: 243 HEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYG 302
H EVN + P + ++AT + V ++D K H H+ E +
Sbjct: 264 HSAEVNCLAFNPYSEFILATGSADKTVALWDLRNLRMK------LHS---FESHRDEIFQ 314
Query: 303 LSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKT-------IFTGHTAVV 350
+ W+P L S+ D + +WD++ ++ DA+ I GHTA +
Sbjct: 315 VQWSPHNETILASSGTDKRLHVWDLSKIGEDQSAEDAEDGPPELLFIHGGHTAKI 369
Score = 63 (27.2 bits), Expect = 6.7e-18, Sum P(2) = 6.7e-18
Identities = 15/55 (27%), Positives = 24/55 (43%)
Query: 285 GECHPDLRLRGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDA 339
GE +GH+ ++W+ +G S DD + +WD+ T IDA
Sbjct: 210 GELQAKDVFKGHESVVEDVAWHVLHDGVFGSVGDDKKLLIWDVR-TSTPGHCIDA 263
>UNIPROTKB|P90916 [details] [associations]
symbol:lin-53 "Probable histone-binding protein lin-53"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0042826 "histone deacetylase binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0009790
"embryo development" evidence=IMP] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0070176
"DRM complex" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=NAS] [GO:0017053
"transcriptional repressor complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0001708 GO:GO:0009792 GO:GO:0006915 GO:GO:0045892
GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0040035 GO:GO:0045138
GO:GO:0040027 GeneTree:ENSGT00570000079069 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0048557 HOGENOM:HOG000160330
EMBL:AF116530 EMBL:Z81097 EMBL:AL023833 PIR:T23391
RefSeq:NP_492552.1 UniGene:Cel.19610 ProteinModelPortal:P90916
SMR:P90916 IntAct:P90916 MINT:MINT-114323 STRING:P90916
PaxDb:P90916 EnsemblMetazoa:K07A1.12.1 EnsemblMetazoa:K07A1.12.2
GeneID:172802 KEGG:cel:CELE_K07A1.12 UCSC:K07A1.12.1 CTD:172802
WormBase:K07A1.12 InParanoid:P90916 OMA:DGFLLHV NextBio:877063
GO:GO:0070176 Uniprot:P90916
Length = 417
Score = 785 (281.4 bits), Expect = 4.8e-78, P = 4.8e-78
Identities = 141/217 (64%), Positives = 174/217 (80%)
Query: 135 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDYSIHRLILGTHTSD 194
RV N+EYKIWKKNTPFLYDLVMTHALEWPSL+ QWLPDV + + D++IHRLILGTHTSD
Sbjct: 12 RVANDEYKIWKKNTPFLYDLVMTHALEWPSLSVQWLPDVAK-DNSDHTIHRLILGTHTSD 70
Query: 195 EQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMP 254
EQNHLLI+ + +P +DAQFDAS YDT++ ++GGFG+V+GK+E +I+INHEGEVNRARYMP
Sbjct: 71 EQNHLLISKICMPTDDAQFDASRYDTERSEYGGFGAVNGKVEPDIRINHEGEVNRARYMP 130
Query: 255 QNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYGLSWNPSLNGYLL 314
Q +IATK+P +DV +FDY KH + P N +P +RL+GH KEGYGLSWNP+ G +L
Sbjct: 131 QKSNIIATKSPHADVYIFDYLKHSAVPRDN-TFNPLIRLKGHTKEGYGLSWNPNKEGLIL 189
Query: 315 SASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVE 351
SASDD T+C WDINA + AK +F GH +VVE
Sbjct: 190 SASDDQTVCHWDINANQNVAGELQAKDVFKGHESVVE 226
Score = 418 (152.2 bits), Expect = 3.7e-39, P = 3.7e-39
Identities = 73/79 (92%), Positives = 78/79 (98%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
VQWSPHNETILASSGTD+RLHVWDLSKIGE+QS EDAEDGPPELLFIHGGHTAKISDFSW
Sbjct: 315 VQWSPHNETILASSGTDKRLHVWDLSKIGEDQSAEDAEDGPPELLFIHGGHTAKISDFSW 374
Query: 61 NPNEPWVICSVSEDNIMQI 79
NPNEPWV+CSVSEDNI+Q+
Sbjct: 375 NPNEPWVVCSVSEDNILQV 393
Score = 215 (80.7 bits), Expect = 1.1e-19, Sum P(2) = 1.1e-19
Identities = 39/55 (70%), Positives = 45/55 (81%)
Query: 89 DDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRVINEEYKI 143
D E+RV N+EYKIWKKNTPFLYDLVMTHALEWPSL+ QWLPDV + N ++ I
Sbjct: 6 DGTSEDRVANDEYKIWKKNTPFLYDLVMTHALEWPSLSVQWLPDVAKD-NSDHTI 59
Score = 80 (33.2 bits), Expect = 1.1e-19, Sum P(2) = 1.1e-19
Identities = 20/90 (22%), Positives = 42/90 (46%)
Query: 242 NHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK--HPSKPDPNGECHPDLRL--RGHQ 297
+H E+ + ++ P N ++A+ + V+D +K + + P+L GH
Sbjct: 307 SHRDEIFQVQWSPHNETILASSGTDKRLHVWDLSKIGEDQSAEDAEDGPPELLFIHGGHT 366
Query: 298 KEGYGLSWNPSLNGYLLSASDDHTICLWDI 327
+ SWNP+ + S S+D+ + +W +
Sbjct: 367 AKISDFSWNPNEPWVVCSVSEDNILQVWQM 396
Score = 79 (32.9 bits), Expect = 1.5e-19, Sum P(2) = 1.5e-19
Identities = 27/115 (23%), Positives = 47/115 (40%)
Query: 243 HEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYG 302
H EVN + P + ++AT + V ++D K H H+ E +
Sbjct: 264 HSAEVNCLAFNPYSEFILATGSADKTVALWDLRNLRMK------LHS---FESHRDEIFQ 314
Query: 303 LSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKT-------IFTGHTAVV 350
+ W+P L S+ D + +WD++ ++ DA+ I GHTA +
Sbjct: 315 VQWSPHNETILASSGTDKRLHVWDLSKIGEDQSAEDAEDGPPELLFIHGGHTAKI 369
Score = 63 (27.2 bits), Expect = 6.7e-18, Sum P(2) = 6.7e-18
Identities = 15/55 (27%), Positives = 24/55 (43%)
Query: 285 GECHPDLRLRGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDA 339
GE +GH+ ++W+ +G S DD + +WD+ T IDA
Sbjct: 210 GELQAKDVFKGHESVVEDVAWHVLHDGVFGSVGDDKKLLIWDVR-TSTPGHCIDA 263
>DICTYBASE|DDB_G0282529 [details] [associations]
symbol:rbbD "putative Retinoblastoma (Rb) binding
protein" species:44689 "Dictyostelium discoideum" [GO:0016568
"chromatin modification" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0282529 GO:GO:0005634
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AAFI02000047 GenomeReviews:CM000152_GR
GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 KO:K10752 OMA:CQPDLRL
InterPro:IPR022052 Pfam:PF12265 RefSeq:XP_640105.1
ProteinModelPortal:Q54SD4 SMR:Q54SD4 STRING:Q54SD4 PRIDE:Q54SD4
EnsemblProtists:DDB0232003 GeneID:8623636 KEGG:ddi:DDB_G0282529
ProtClustDB:CLSZ2430461 Uniprot:Q54SD4
Length = 423
Score = 753 (270.1 bits), Expect = 1.2e-74, P = 1.2e-74
Identities = 139/229 (60%), Positives = 176/229 (76%)
Query: 125 LTAQWLPDVT-RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDYSI 183
+T Q + DV +VINEEYKIWK++TPFLYD+V+THALEWPSLT WLP T K YSI
Sbjct: 1 MTTQ-MEDVEEKVINEEYKIWKRHTPFLYDMVITHALEWPSLTVAWLPVKTSQPNKPYSI 59
Query: 184 HRLILGTHTSDE-QNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKIN 242
++ILGTHTSDE QN+L++A V LP ++A ++ YD KG+ GG G+VS KIEI KIN
Sbjct: 60 EKVILGTHTSDEEQNYLMVAKVHLPVDEASIESLKYDDTKGEVGGIGNVSEKIEIIQKIN 119
Query: 243 HEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYG 302
HEGEVNRAR MPQN +IATKT SS+V +FD TKHP +P P+G+C P+L+L GH+KEGYG
Sbjct: 120 HEGEVNRARVMPQNHSIIATKTVSSEVYIFDTTKHPLEPTPDGKCSPNLKLTGHKKEGYG 179
Query: 303 LSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVE 351
+SWNP G+LLS SDD +IC+WDI+A K + +DA I+ GHT++VE
Sbjct: 180 ISWNPRKEGHLLSCSDDQSICMWDISAASKSDSTLDALNIYNGHTSIVE 228
Score = 362 (132.5 bits), Expect = 3.2e-33, P = 3.2e-33
Identities = 67/103 (65%), Positives = 83/103 (80%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
VQ+SPHNET+LAS G+DRR++VWDLS+IGEEQ+ EDA DGPPELLFIHGGHT+KISDFSW
Sbjct: 318 VQFSPHNETVLASCGSDRRVNVWDLSRIGEEQNNEDAADGPPELLFIHGGHTSKISDFSW 377
Query: 61 NPNEPWVICSVSEDNIMQILSV---VCVEPFDDAVEERVINEE 100
NPN+PW I SV+EDNI+QI + + + DD +V N +
Sbjct: 378 NPNDPWSIASVAEDNILQIWQMAENIYNDREDDLENSKVTNAQ 420
Score = 208 (78.3 bits), Expect = 7.7e-19, Sum P(2) = 7.7e-19
Identities = 38/54 (70%), Positives = 44/54 (81%)
Query: 92 VEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRVINEEYKIWK 145
VEE+VINEEYKIWK++TPFLYD+V+THALEWPSLT WLP T N+ Y I K
Sbjct: 8 VEEKVINEEYKIWKRHTPFLYDMVITHALEWPSLTVAWLPVKTSQPNKPYSIEK 61
Score = 103 (41.3 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 37/130 (28%), Positives = 54/130 (41%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
+ W+P E L S D+ + +WD+S + ST DA L I+ GHT+ + D +W
Sbjct: 180 ISWNPRKEGHLLSCSDDQSICMWDISAASKSDSTLDA-------LNIYNGHTSIVEDVAW 232
Query: 61 NPNEPWVICSVSEDNIMQILSV-VCVEPFDDAVEERVINEEYKIWKKNTPFLYDLVMTHA 119
+ SV +D + I +P VE N E N PF LV T +
Sbjct: 233 HYIHDTFFGSVGDDKKLMIWDTRTGTKPIH-VVEAH--NSEVNCLSFN-PFCEFLVATGS 288
Query: 120 LEWPSLTAQW 129
+ A W
Sbjct: 289 TD--KTVALW 296
Score = 81 (33.6 bits), Expect = 7.7e-19, Sum P(2) = 7.7e-19
Identities = 22/91 (24%), Positives = 43/91 (47%)
Query: 241 INHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK--HPSKPDPNGECHPDLRL--RGH 296
I+H EV + ++ P N V+A+ V V+D ++ + + P+L GH
Sbjct: 309 ISHTDEVFQVQFSPHNETVLASCGSDRRVNVWDLSRIGEEQNNEDAADGPPELLFIHGGH 368
Query: 297 QKEGYGLSWNPSLNGYLLSASDDHTICLWDI 327
+ SWNP+ + S ++D+ + +W +
Sbjct: 369 TSKISDFSWNPNDPWSIASVAEDNILQIWQM 399
Score = 71 (30.1 bits), Expect = 8.5e-18, Sum P(2) = 8.5e-18
Identities = 30/146 (20%), Positives = 61/146 (41%)
Query: 196 QNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKIN-HEGEVNRARYMP 254
QNH +IA+ + +E FD + + + + GK +K+ H+ E + P
Sbjct: 132 QNHSIIATKTVSSEVYIFDTTKHPLEP-------TPDGKCSPNLKLTGHKKEGYGISWNP 184
Query: 255 QNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRL-RGHQKEGYGLSWNPSLNGYL 313
+ + + + + ++D + SK D + L + GH ++W+ + +
Sbjct: 185 RKEGHLLSCSDDQSICMWDISA-ASKSDSTLDA---LNIYNGHTSIVEDVAWHYIHDTFF 240
Query: 314 LSASDDHTICLWDINATPKENRVIDA 339
S DD + +WD K V++A
Sbjct: 241 GSVGDDKKLMIWDTRTGTKPIHVVEA 266
Score = 62 (26.9 bits), Expect = 7.3e-17, Sum P(2) = 7.3e-17
Identities = 24/108 (22%), Positives = 43/108 (39%)
Query: 232 SGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDL 291
+G I + H EVN + P ++AT + V ++D ++ H
Sbjct: 256 TGTKPIHVVEAHNSEVNCLSFNPFCEFLVATGSTDKTVALWDMRNLGNR------LHS-- 307
Query: 292 RLRGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDA 339
L H E + + ++P L S D + +WD++ +E DA
Sbjct: 308 -LISHTDEVFQVQFSPHNETVLASCGSDRRVNVWDLSRIGEEQNNEDA 354
>WB|WBGene00004312 [details] [associations]
symbol:rba-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0001703 "gastrulation with
mouth forming first" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0016246 "RNA interference" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0045138 "tail tip
morphogenesis" evidence=IMP] [GO:0001708 "cell fate specification"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0001708 GO:GO:0009792 GO:GO:0006915
GO:GO:0016246 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0006351
GO:GO:0016568 GO:GO:0040035 GO:GO:0045138
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0001703 HOGENOM:HOG000160330 EMBL:Z81097
OMA:MPDVTKT PIR:T23385 RefSeq:NP_492551.1 ProteinModelPortal:P90917
SMR:P90917 STRING:P90917 PaxDb:P90917 EnsemblMetazoa:K07A1.11.1
EnsemblMetazoa:K07A1.11.2 GeneID:172801 KEGG:cel:CELE_K07A1.11
UCSC:K07A1.11 CTD:172801 WormBase:K07A1.11 InParanoid:P90917
NextBio:877059 Uniprot:P90917
Length = 412
Score = 599 (215.9 bits), Expect = 2.5e-58, P = 2.5e-58
Identities = 109/216 (50%), Positives = 153/216 (70%)
Query: 138 NEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDYSIHRLILGTHT-SDEQ 196
++E++IWKKN P+LYD V+T +EWPSL+ QW+PDVT+ E D S+HR+I GTHT Q
Sbjct: 11 SKEHRIWKKNVPYLYDTVVTKEVEWPSLSVQWMPDVTKTENSDSSMHRMIHGTHTCGGVQ 70
Query: 197 NHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSG-KIEIEIKINHEGEVNRARYMPQ 255
NHL+I+ + + +FD + +D+++ +FGG+G S K + EIKINH GEV+RARYMP
Sbjct: 71 NHLMISKFTITTDTPEFDDAKWDSEREEFGGYGEGSAAKWDTEIKINHPGEVHRARYMPH 130
Query: 256 NPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYGLSWNPSLNGYLLS 315
NP +IA++ PS DV +FDYTKHPS+P + P LRL+GH+ EGYG+SW+ + G+LL+
Sbjct: 131 NPFIIASRGPSDDVYIFDYTKHPSEPKDT-KFRPQLRLKGHEGEGYGMSWSNTREGHLLT 189
Query: 316 ASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVE 351
A DD IC WDINA + I ++ F GH++ E
Sbjct: 190 AGDDGMICHWDINANQTISGQIVPQSKFKGHSSNAE 225
Score = 261 (96.9 bits), Expect = 5.4e-21, P = 5.4e-21
Identities = 47/84 (55%), Positives = 60/84 (71%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDG--PPELLFIHGGHTAKISDF 58
V +SPH ET+LASSG+D R+ VWD+SKI + S+ A PPE++FIH GHT K++DF
Sbjct: 314 VSFSPHYETVLASSGSDDRVIVWDISKIQDPSSSSAASSDSVPPEVIFIHAGHTGKVADF 373
Query: 59 SWNPNEPWVICSVSEDNIMQILSV 82
SWNPN PW ICS E N +Q+ V
Sbjct: 374 SWNPNRPWTICSSDEFNALQVWEV 397
Score = 156 (60.0 bits), Expect = 6.3e-12, Sum P(2) = 6.3e-12
Identities = 24/43 (55%), Positives = 35/43 (81%)
Query: 98 NEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRVINEE 140
++E++IWKKN P+LYD V+T +EWPSL+ QW+PDVT+ N +
Sbjct: 11 SKEHRIWKKNVPYLYDTVVTKEVEWPSLSVQWMPDVTKTENSD 53
Score = 74 (31.1 bits), Expect = 6.3e-12, Sum P(2) = 6.3e-12
Identities = 20/93 (21%), Positives = 43/93 (46%)
Query: 242 NHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK--HPSKPDP--NGECHPDLRL--RG 295
+H E+ + + P V+A+ V+V+D +K PS + P++ G
Sbjct: 306 HHNDEIFQVSFSPHYETVLASSGSDDRVIVWDISKIQDPSSSSAASSDSVPPEVIFIHAG 365
Query: 296 HQKEGYGLSWNPSLNGYLLSASDDHTICLWDIN 328
H + SWNP+ + S+ + + + +W+++
Sbjct: 366 HTGKVADFSWNPNRPWTICSSDEFNALQVWEVS 398
Score = 73 (30.8 bits), Expect = 8.0e-12, Sum P(2) = 8.0e-12
Identities = 21/88 (23%), Positives = 38/88 (43%)
Query: 241 INHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEG 300
+ H EVN + P + ++AT + V ++D K L+ H E
Sbjct: 261 VGHTAEVNCITFNPFSEYILATGSVDKTVALWDMRNMRKKM---------YTLKHHNDEI 311
Query: 301 YGLSWNPSLNGYLLSASDDHTICLWDIN 328
+ +S++P L S+ D + +WDI+
Sbjct: 312 FQVSFSPHYETVLASSGSDDRVIVWDIS 339
Score = 67 (28.6 bits), Expect = 3.3e-11, Sum P(2) = 3.3e-11
Identities = 33/155 (21%), Positives = 63/155 (40%)
Query: 197 NHLLIASVQLPNEDAQ-FDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQ 255
N +IAS + P++D FD + + ++ D + ++ +K HEGE +
Sbjct: 131 NPFIIAS-RGPSDDVYIFDYTKHPSEPKD------TKFRPQLRLK-GHEGEGYGMSWSNT 182
Query: 256 NPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYGLSWNPSLNGYLLS 315
+ T + +D + + +G+ P + +GH +S++ N S
Sbjct: 183 REGHLLTAGDDGMICHWDINANQTI---SGQIVPQSKFKGHSSNAEDVSFHALHNFVFGS 239
Query: 316 ASDDHTICLWDINATPKENRVIDAKTIFTGHTAVV 350
DD + LWD+ + + + GHTA V
Sbjct: 240 VGDDRKLNLWDLRQSKPQLTAV-------GHTAEV 267
Score = 65 (27.9 bits), Expect = 5.4e-11, Sum P(2) = 5.4e-11
Identities = 15/45 (33%), Positives = 22/45 (48%)
Query: 289 PDLRLRGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDINATPKE 333
P L GH E +++NP L + S D T+ LWD+ K+
Sbjct: 256 PQLTAVGHTAEVNCITFNPFSEYILATGSVDKTVALWDMRNMRKK 300
>POMBASE|SPCC1672.10 [details] [associations]
symbol:mis16 "kinetochore protein Mis16" species:4896
"Schizosaccharomyces pombe" [GO:0000070 "mitotic sister chromatid
segregation" evidence=IMP] [GO:0000778 "condensed nuclear
chromosome kinetochore" evidence=IDA] [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006995 "cellular response to nitrogen starvation"
evidence=IMP] [GO:0016575 "histone deacetylation" evidence=IMP]
[GO:0031055 "chromatin remodeling at centromere" evidence=IMP]
[GO:0031066 "regulation of histone deacetylation at centromere"
evidence=IMP] [GO:0031511 "Mis6-Sim4 complex" evidence=TAS]
[GO:0034501 "protein localization to kinetochore" evidence=IMP]
[GO:0051382 "kinetochore assembly" evidence=TAS] [GO:0070317
"negative regulation of G0 to G1 transition" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPCC1672.10 GO:GO:0005829 GO:GO:0070317 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0006281 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000790 GO:GO:0000070
GO:GO:0000778 GO:GO:0034501 GO:GO:0006995 GO:GO:0051382
GO:GO:0016575 KO:K10752 InterPro:IPR022052 Pfam:PF12265 PIR:T41054
RefSeq:NP_587881.1 ProteinModelPortal:O94244 SMR:O94244
IntAct:O94244 STRING:O94244 PRIDE:O94244 EnsemblFungi:SPCC1672.10.1
GeneID:2539214 KEGG:spo:SPCC1672.10 HOGENOM:HOG000160330
OMA:NSCIIAT OrthoDB:EOG412QFD NextBio:20800384 GO:GO:0031511
GO:GO:0031055 GO:GO:0031066 Uniprot:O94244
Length = 430
Score = 536 (193.7 bits), Expect = 1.2e-51, P = 1.2e-51
Identities = 118/242 (48%), Positives = 148/242 (61%)
Query: 113 DLVMTHALEWPSLTAQWLPDVTRVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPD 172
++V LE L A+ D+ + I EEYK+WK+N PFLYDLV+THALEWPSLT QWLPD
Sbjct: 4 EVVQDAPLENNELNAEI--DLQKTIQEEYKLWKQNVPFLYDLVITHALEWPSLTIQWLPD 61
Query: 173 VTRPEGKDYSIHRLILGTHTS-DEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSV 231
G DYSI RLILGTHTS ++QN+L IASVQLPN D D + + T +
Sbjct: 62 KKTIPGTDYSIQRLILGTHTSGNDQNYLQIASVQLPNFDE--DTTEF-TPSTIRRAQATG 118
Query: 232 SGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDL 291
S IEI KI H+G+VNRARYMPQ P +IAT + +FD T H + GE P
Sbjct: 119 SYTIEISQKIPHDGDVNRARYMPQKPEIIATMGEGGNAYIFDTTCHDALT--TGEALPQA 176
Query: 292 RLRGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDINA---TPKENRVIDAKTIFTGHTA 348
L+GH EG+GL WNP+L G L + ++D ICLWD+ T E +VI + HT
Sbjct: 177 VLKGHTAEGFGLCWNPNLPGNLATGAEDQVICLWDVQTQSFTSSETKVISPIAKYHRHTD 236
Query: 349 VV 350
+V
Sbjct: 237 IV 238
Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 56/81 (69%), Positives = 70/81 (86%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
++WSPH+E ILASS TDRR+ +WDL KIGEEQ+ EDAEDG PELLF+HGGHT +IS+FSW
Sbjct: 331 LEWSPHDEPILASSSTDRRVCIWDLEKIGEEQTPEDAEDGSPELLFMHGGHTNRISEFSW 390
Query: 61 NPNEPWVICSVSEDNIMQILS 81
PNE WV+ S+++DNI+QI S
Sbjct: 391 CPNERWVVGSLADDNILQIWS 411
Score = 191 (72.3 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
Identities = 32/50 (64%), Positives = 39/50 (78%)
Query: 94 ERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRVINEEYKI 143
++ I EEYK+WK+N PFLYDLV+THALEWPSLT QWLPD + +Y I
Sbjct: 23 QKTIQEEYKLWKQNVPFLYDLVITHALEWPSLTIQWLPDKKTIPGTDYSI 72
Score = 118 (46.6 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
Identities = 29/98 (29%), Positives = 44/98 (44%)
Query: 243 HEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYG 302
H +N P N ++AT + V ++D +P H L GH+ E YG
Sbjct: 280 HSKAINAVAINPFNDYLLATASADKTVALWDLR------NPYQRLHT---LEGHEDEVYG 330
Query: 303 LSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAK 340
L W+P L S+S D +C+WD+ +E DA+
Sbjct: 331 LEWSPHDEPILASSSTDRRVCIWDLEKIGEEQTPEDAE 368
Score = 87 (35.7 bits), Expect = 2.4e-17, Sum P(2) = 2.4e-17
Identities = 25/86 (29%), Positives = 45/86 (52%)
Query: 243 HEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYG 302
H VN ++ PQ+ ++A+ + + + H ++ +P E P + ++ H K
Sbjct: 234 HTDIVNDVQFHPQHEALLASVSDDCTLQI-----HDTRLNPEEEA-PKV-IQAHSKAINA 286
Query: 303 LSWNPSLNGYLLS-ASDDHTICLWDI 327
++ NP N YLL+ AS D T+ LWD+
Sbjct: 287 VAINP-FNDYLLATASADKTVALWDL 311
Score = 80 (33.2 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 35/138 (25%), Positives = 66/138 (47%)
Query: 2 QWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWN 61
++ P I+A+ G +++D + + +T +A P +L GHTA+ WN
Sbjct: 138 RYMPQKPEIIATMGEGGNAYIFDTT-CHDALTTGEAL--PQAVL---KGHTAEGFGLCWN 191
Query: 62 PNEPWVICSVSEDNIMQILSVVCVEPFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALE 121
PN P + + +ED ++ + V + F + E +VI+ K + ++T + D V H +
Sbjct: 192 PNLPGNLATGAEDQVICLWDVQ-TQSFTSS-ETKVISPIAK-YHRHTDIVND-VQFHP-Q 246
Query: 122 WPSLTAQWLPDVTRVINE 139
+L A D T I++
Sbjct: 247 HEALLASVSDDCTLQIHD 264
Score = 76 (31.8 bits), Expect = 3.4e-16, Sum P(2) = 3.4e-16
Identities = 21/87 (24%), Positives = 38/87 (43%)
Query: 243 HEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK--HPSKPDPNGECHPDLRLR--GHQK 298
HE EV + P + ++A+ + V ++D K P+ + P+L GH
Sbjct: 324 HEDEVYGLEWSPHDEPILASSSTDRRVCIWDLEKIGEEQTPEDAEDGSPELLFMHGGHTN 383
Query: 299 EGYGLSWNPSLNGYLLSASDDHTICLW 325
SW P+ + S +DD+ + +W
Sbjct: 384 RISEFSWCPNERWVVGSLADDNILQIW 410
Score = 54 (24.1 bits), Expect = 6.6e-14, Sum P(2) = 6.6e-14
Identities = 20/88 (22%), Positives = 32/88 (36%)
Query: 254 PQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYGLSWNPSLNGYL 313
P P +AT + ++D P + H + ++P L
Sbjct: 192 PNLPGNLATGAEDQVICLWDVQTQSFTSSETKVISPIAKYHRHTDIVNDVQFHPQHEALL 251
Query: 314 LSASDDHTICLWDINATPKEN--RVIDA 339
S SDD T+ + D P+E +VI A
Sbjct: 252 ASVSDDCTLQIHDTRLNPEEEAPKVIQA 279
>TAIR|locus:2131551 [details] [associations]
symbol:MSI3 "MULTICOPY SUPPRESSOR OF IRA1 3" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0005515 "protein binding" evidence=IPI] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=IPI] [GO:0000278 "mitotic cell
cycle" evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0006406 "mRNA export from nucleus" evidence=RCA] [GO:0006606
"protein import into nucleus" evidence=RCA] [GO:0009560 "embryo sac
egg cell differentiation" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010074 "maintenance of meristem
identity" evidence=RCA] [GO:0010162 "seed dormancy process"
evidence=RCA] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0016567 "protein
ubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0050826 "response to freezing" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 EMBL:AL022023 EMBL:AL161586 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000160330
OMA:VLYDLVI ProtClustDB:CLSN2683757 EMBL:AF016848 IPI:IPI00525720
PIR:T05775 RefSeq:NP_195231.1 UniGene:At.2099
ProteinModelPortal:O22469 SMR:O22469 IntAct:O22469 STRING:O22469
PaxDb:O22469 PRIDE:O22469 EnsemblPlants:AT4G35050.1 GeneID:829657
KEGG:ath:AT4G35050 GeneFarm:2817 TAIR:At4g35050 InParanoid:O22469
PhylomeDB:O22469 Genevestigator:O22469 GermOnline:AT4G35050
Uniprot:O22469
Length = 424
Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
Identities = 101/218 (46%), Positives = 143/218 (65%)
Query: 137 INEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD--YSIHRLILGTHTSD 194
+ EE+ IWK+NTPFLYDL+++H LEWPSLT W+P P KD +++H+LILGTHTS
Sbjct: 15 VEEEFSIWKRNTPFLYDLMISHPLEWPSLTLHWVPSTPIPYSKDPYFAVHKLILGTHTSG 74
Query: 195 -EQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYM 253
Q+ L++A V +P DA+ D + + K+EI+ KI +GEVNRAR M
Sbjct: 75 GAQDFLMVADVVIPTPDAEPGLGGRDQEP--------IVPKVEIKQKIRVDGEVNRARCM 126
Query: 254 PQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYGLSWNPSLNGYL 313
PQ P ++ KT S+V +FDY + KP + EC PDLRL GH++EGYGL+W+ GYL
Sbjct: 127 PQKPTLVGAKTSGSEVFLFDYARLSGKPQTS-ECDPDLRLMGHEQEGYGLAWSSFKEGYL 185
Query: 314 LSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVE 351
LS S D ICLWD++AT + +V++ ++ GH +++E
Sbjct: 186 LSGSQDQRICLWDVSATATD-KVLNPMHVYEGHQSIIE 222
Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
Identities = 55/81 (67%), Positives = 69/81 (85%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQ-STE-DAEDGPPELLFIHGGHTAKISDF 58
V+W P++ET+LASSG DRRL VWD++++G+EQ E DAEDGPPELLF HGGH AKISDF
Sbjct: 311 VEWDPNHETVLASSGEDRRLMVWDINRVGDEQLEIELDAEDGPPELLFSHGGHKAKISDF 370
Query: 59 SWNPNEPWVICSVSEDNIMQI 79
+WN +EPWVI SV+EDN +Q+
Sbjct: 371 AWNKDEPWVISSVAEDNSLQV 391
Score = 152 (58.6 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 26/43 (60%), Positives = 35/43 (81%)
Query: 89 DDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLP 131
D+A ++V EE+ IWK+NTPFLYDL+++H LEWPSLT W+P
Sbjct: 8 DEAGLDQV-EEEFSIWKRNTPFLYDLMISHPLEWPSLTLHWVP 49
Score = 115 (45.5 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 31/107 (28%), Positives = 54/107 (50%)
Query: 232 SGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDL 291
+ +++ ++K+ HE E+N + P N V+AT + S V +FD K + P H
Sbjct: 250 TNQMQHQVKV-HEREINYLSFNPFNEWVLATASSDSTVALFDLRKLTA---P---LHV-- 300
Query: 292 RLRGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVID 338
L H+ E + + W+P+ L S+ +D + +WDIN E I+
Sbjct: 301 -LSKHEGEVFQVEWDPNHETVLASSGEDRRLMVWDINRVGDEQLEIE 346
Score = 72 (30.4 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 19/72 (26%), Positives = 32/72 (44%)
Query: 3 WSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNP 62
WS E L S D+R+ +WD+S + D P + ++ GH + I D +W+
Sbjct: 177 WSSFKEGYLLSGSQDQRICLWDVSA-----TATDKVLNP---MHVYEGHQSIIEDVAWHM 228
Query: 63 NEPWVICSVSED 74
+ S +D
Sbjct: 229 KNENIFGSAGDD 240
Score = 68 (29.0 bits), Expect = 8.5e-11, Sum P(2) = 8.5e-11
Identities = 20/97 (20%), Positives = 45/97 (46%)
Query: 237 IEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKP---DPNGECHPDLRL 293
+ + HEGEV + + P + V+A+ ++V+D + + + + E P L
Sbjct: 298 LHVLSKHEGEVFQVEWDPNHETVLASSGEDRRLMVWDINRVGDEQLEIELDAEDGPPELL 357
Query: 294 ---RGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI 327
GH+ + +WN + S ++D+++ +W +
Sbjct: 358 FSHGGHKAKISDFAWNKDEPWVISSVAEDNSLQVWQM 394
Score = 57 (25.1 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 11/42 (26%), Positives = 20/42 (47%)
Query: 295 GHQKEGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRV 336
GHQ ++W+ SA DD + +WD+ +++V
Sbjct: 216 GHQSIIEDVAWHMKNENIFGSAGDDCQLVIWDLRTNQMQHQV 257
>TAIR|locus:2059856 [details] [associations]
symbol:MSI2 "AT2G16780" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0000911
"cytokinesis by cell plate formation" evidence=RCA] [GO:0006260
"DNA replication" evidence=RCA] [GO:0006306 "DNA methylation"
evidence=RCA] [GO:0007067 "mitosis" evidence=RCA] [GO:0007129
"synapsis" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0008283 "cell proliferation"
evidence=RCA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] [GO:0010564 "regulation of cell cycle process"
evidence=RCA] [GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 EMBL:AC005825 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000160330
ProtClustDB:CLSN2683757 EMBL:AF016847 EMBL:AY056814 IPI:IPI00526379
PIR:B84544 RefSeq:NP_179269.1 UniGene:At.25135
ProteinModelPortal:O22468 SMR:O22468 STRING:O22468 PaxDb:O22468
PRIDE:O22468 EnsemblPlants:AT2G16780.1 GeneID:816179
KEGG:ath:AT2G16780 GeneFarm:2815 TAIR:At2g16780 InParanoid:O22468
OMA:EVNYLSF PhylomeDB:O22468 Genevestigator:O22468
GermOnline:AT2G16780 Uniprot:O22468
Length = 415
Score = 530 (191.6 bits), Expect = 5.1e-51, P = 5.1e-51
Identities = 102/217 (47%), Positives = 140/217 (64%)
Query: 137 INEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD--YSIHRLILGTHTSD 194
+ E++ +WKKNTPFLYDL+++H LEWPSLT W+P P D + +H+LILGTHTS
Sbjct: 14 VEEDFSVWKKNTPFLYDLLISHPLEWPSLTVHWVPSTPNPYVADSYFGVHKLILGTHTSG 73
Query: 195 E-QNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYM 253
Q+ L++A V P +A+ + D F K+EI +I +GEVNRAR M
Sbjct: 74 SAQDFLMVADVVTPTPNAEPGIGGANQDP--F------IPKVEIRQRIRVDGEVNRARCM 125
Query: 254 PQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYGLSWNPSLNGYL 313
PQ P ++ KT +V +FDY KH +K + EC PDLRL GH KEGYGLSW+P GYL
Sbjct: 126 PQKPTLVGAKTSGCEVFLFDYAKHAAKSQTS-ECDPDLRLVGHDKEGYGLSWSPFKEGYL 184
Query: 314 LSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVV 350
LS S D ICLWD++ATP++ +V++A ++ GH + +
Sbjct: 185 LSGSQDQKICLWDVSATPQD-KVLNAMFVYEGHESAI 220
Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 58/81 (71%), Positives = 69/81 (85%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQ-STE-DAEDGPPELLFIHGGHTAKISDF 58
V+W P++ET+LASSG DRRL VWDL+++GEEQ E DAEDGPPELLF HGGH AKISDF
Sbjct: 310 VEWDPNHETVLASSGEDRRLMVWDLNRVGEEQLEIELDAEDGPPELLFSHGGHKAKISDF 369
Query: 59 SWNPNEPWVICSVSEDNIMQI 79
+WN NEPWVI SV+EDN +Q+
Sbjct: 370 AWNKNEPWVIASVAEDNSLQV 390
Score = 151 (58.2 bits), Expect = 3.3e-16, Sum P(2) = 3.3e-16
Identities = 22/35 (62%), Positives = 30/35 (85%)
Query: 97 INEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLP 131
+ E++ +WKKNTPFLYDL+++H LEWPSLT W+P
Sbjct: 14 VEEDFSVWKKNTPFLYDLLISHPLEWPSLTVHWVP 48
Score = 121 (47.7 bits), Expect = 3.3e-16, Sum P(2) = 3.3e-16
Identities = 30/107 (28%), Positives = 54/107 (50%)
Query: 232 SGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDL 291
+ +++ ++K+ HE EVN + P N V+AT + S V +FD K N H
Sbjct: 249 TNQMQHQVKV-HEREVNYLSFNPFNEWVLATASSDSTVALFDLRKL------NAPLHV-- 299
Query: 292 RLRGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVID 338
+ H+ E + + W+P+ L S+ +D + +WD+N +E I+
Sbjct: 300 -MSSHEGEVFQVEWDPNHETVLASSGEDRRLMVWDLNRVGEEQLEIE 345
Score = 93 (37.8 bits), Expect = 7.2e-10, Sum P(2) = 7.2e-10
Identities = 23/79 (29%), Positives = 39/79 (49%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
+ WSP E L S D+++ +WD+S +T +D +F++ GH + I+D SW
Sbjct: 174 LSWSPFKEGYLLSGSQDQKICLWDVS------ATP--QDKVLNAMFVYEGHESAIADVSW 225
Query: 61 NPNEPWVICSVSEDNIMQI 79
+ + S ED + I
Sbjct: 226 HMKNENLFGSAGEDGRLVI 244
Score = 72 (30.4 bits), Expect = 4.0e-11, Sum P(2) = 4.0e-11
Identities = 20/97 (20%), Positives = 47/97 (48%)
Query: 237 IEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKP---DPNGECHPDLRL 293
+ + +HEGEV + + P + V+A+ ++V+D + + + + E P L
Sbjct: 297 LHVMSSHEGEVFQVEWDPNHETVLASSGEDRRLMVWDLNRVGEEQLEIELDAEDGPPELL 356
Query: 294 ---RGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI 327
GH+ + +WN + + S ++D+++ +W +
Sbjct: 357 FSHGGHKAKISDFAWNKNEPWVIASVAEDNSLQVWQM 393
Score = 58 (25.5 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 19/98 (19%), Positives = 43/98 (43%)
Query: 5 PHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNE 64
P T++ + + + ++D +K + T + + P+L + GH + SW+P +
Sbjct: 126 PQKPTLVGAKTSGCEVFLFDYAKHAAKSQTSECD---PDLRLV--GHDKEGYGLSWSPFK 180
Query: 65 PWVICSVSEDNIMQILSVVCVEPFDDAVEERVINEEYK 102
+ S S+D + + V P D + + E ++
Sbjct: 181 EGYLLSGSQDQKICLWDVSAT-PQDKVLNAMFVYEGHE 217
Score = 53 (23.7 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 10/42 (23%), Positives = 19/42 (45%)
Query: 295 GHQKEGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRV 336
GH+ +SW+ SA +D + +WD +++V
Sbjct: 215 GHESAIADVSWHMKNENLFGSAGEDGRLVIWDTRTNQMQHQV 256
>ASPGD|ASPL0000017699 [details] [associations]
symbol:AN8187 species:162425 "Emericella nidulans"
[GO:0000778 "condensed nuclear chromosome kinetochore"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0000070 "mitotic sister chromatid segregation"
evidence=IEA] [GO:0006995 "cellular response to nitrogen
starvation" evidence=IEA] [GO:0034501 "protein localization to
kinetochore" evidence=IEA] [GO:0031055 "chromatin remodeling at
centromere" evidence=IEA] [GO:0070317 "negative regulation of G0 to
G1 transition" evidence=IEA] [GO:0016575 "histone deacetylation"
evidence=IEA] [GO:0031066 "regulation of histone deacetylation at
centromere" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001302 OMA:CQPDLRL InterPro:IPR022052
Pfam:PF12265 EnsemblFungi:CADANIAT00004230 Uniprot:C8V748
Length = 411
Score = 439 (159.6 bits), Expect = 2.2e-41, P = 2.2e-41
Identities = 91/191 (47%), Positives = 124/191 (64%)
Query: 135 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDYSIHRLILGTHTS- 193
++INEEYK WKKN PFLYD++++ ALEWP+LT QWLPD K YS HRL+LGTHTS
Sbjct: 23 KIINEEYKTWKKNAPFLYDMILSTALEWPTLTTQWLPDKQDASDKPYSTHRLLLGTHTSS 82
Query: 194 DEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEI------KINHEGEV 247
D QN+L IA VQLPN +A + +YD ++G+ GG+G S K +EI KI+H+GEV
Sbjct: 83 DAQNYLQIAQVQLPNPNAP-NPDDYDEERGEIGGYGGSSKKAPMEINFKIVQKIDHKGEV 141
Query: 248 NRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYGLSWNP 307
N+AR V+++D +KH S P G +P + L GH++EG+GLSW+P
Sbjct: 142 NKAR-----------------VMIWDRSKHQSVP--TGTVNPQMELLGHKQEGFGLSWSP 182
Query: 308 SLNGYLLSASD 318
+ G+L + D
Sbjct: 183 HVAGHLATGRD 193
Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
Identities = 50/82 (60%), Positives = 66/82 (80%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
+ W P E +LAS+ DR++ WDLS+ GEEQ+ EDA+DGPPELLF+HGGHT +ISDFSW
Sbjct: 311 ISWHPFEEAVLASASYDRKIMFWDLSRAGEEQTPEDAQDGPPELLFMHGGHTNRISDFSW 370
Query: 61 NPNEPWVICSVSEDNIMQILSV 82
N N+PWV+CS +EDN++Q+ V
Sbjct: 371 NLNDPWVLCSAAEDNLLQVWKV 392
Score = 128 (50.1 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 26/82 (31%), Positives = 46/82 (56%)
Query: 269 VLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDIN 328
V+++D +KH S P G +P + L GH++EG+GLSW+P + G+L + D +
Sbjct: 146 VMIWDRSKHQSVP--TGTVNPQMELLGHKQEGFGLSWSPHVAGHLATGRD--------LT 195
Query: 329 ATPKENRVIDAKTIFTGHTAVV 350
K N+ + +T H+++V
Sbjct: 196 TYTKNNKALQPVRTYTHHSSIV 217
>UNIPROTKB|C9JPP3 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] GO:GO:0016581 InterPro:IPR022052
Pfam:PF12265 HOGENOM:HOG000160330 EMBL:AC114489 HGNC:HGNC:9887
ChiTaRS:RBBP4 IPI:IPI00974561 ProteinModelPortal:C9JPP3 SMR:C9JPP3
STRING:C9JPP3 Ensembl:ENST00000445722 ArrayExpress:C9JPP3
Bgee:C9JPP3 Uniprot:C9JPP3
Length = 87
Score = 435 (158.2 bits), Expect = 5.9e-41, P = 5.9e-41
Identities = 79/87 (90%), Positives = 87/87 (100%)
Query: 156 MTHALEWPSLTAQWLPDVTRPEGKDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDA 215
MTHALEWPSLTAQWLPDVTRPEGKD+SIHRL+LGTHTSDEQNHL+IASVQLPN+DAQFDA
Sbjct: 1 MTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDA 60
Query: 216 SNYDTDKGDFGGFGSVSGKIEIEIKIN 242
S+YD++KG+FGGFGSVSGKIEIEIKIN
Sbjct: 61 SHYDSEKGEFGGFGSVSGKIEIEIKIN 87
Score = 118 (46.6 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 21/28 (75%), Positives = 24/28 (85%)
Query: 116 MTHALEWPSLTAQWLPDVTRVINEEYKI 143
MTHALEWPSLTAQWLPDVTR +++ I
Sbjct: 1 MTHALEWPSLTAQWLPDVTRPEGKDFSI 28
>UNIPROTKB|B4DRT0 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016581 EMBL:AC114489 UniGene:Hs.16003
HGNC:HGNC:9887 ChiTaRS:RBBP4 EMBL:AK299410 IPI:IPI00983362
SMR:B4DRT0 STRING:B4DRT0 Ensembl:ENST00000544435 UCSC:uc010ohj.2
HOVERGEN:HBG103193 Uniprot:B4DRT0
Length = 173
Score = 420 (152.9 bits), Expect = 2.3e-39, P = 2.3e-39
Identities = 76/79 (96%), Positives = 78/79 (98%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
VQWSPHNETILASSGTDRRL+VWDLSKIGEEQS EDAEDGPPELLFIHGGHTAKISDFSW
Sbjct: 71 VQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSW 130
Query: 61 NPNEPWVICSVSEDNIMQI 79
NPNEPWVICSVSEDNIMQ+
Sbjct: 131 NPNEPWVICSVSEDNIMQV 149
Score = 90 (36.7 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 22/98 (22%), Positives = 48/98 (48%)
Query: 234 KIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK--HPSKPDPNGECHPDL 291
K+++ +H+ E+ + ++ P N ++A+ + V+D +K P+ + P+L
Sbjct: 55 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPEL 114
Query: 292 RL--RGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI 327
GH + SWNP+ + S S+D+ + +W +
Sbjct: 115 LFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQM 152
Score = 58 (25.5 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 9/28 (32%), Positives = 19/28 (67%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKI 28
+ ++P++E ILA+ D+ + +WDL +
Sbjct: 27 LSFNPYSEFILATGSADKTVALWDLRNL 54
>UNIPROTKB|H0YCT5 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016581 EMBL:AC114489 HGNC:HGNC:9887
ChiTaRS:RBBP4 PRIDE:H0YCT5 Ensembl:ENST00000460669 Bgee:H0YCT5
Uniprot:H0YCT5
Length = 180
Score = 420 (152.9 bits), Expect = 2.3e-39, P = 2.3e-39
Identities = 76/79 (96%), Positives = 78/79 (98%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
VQWSPHNETILASSGTDRRL+VWDLSKIGEEQS EDAEDGPPELLFIHGGHTAKISDFSW
Sbjct: 78 VQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSW 137
Query: 61 NPNEPWVICSVSEDNIMQI 79
NPNEPWVICSVSEDNIMQ+
Sbjct: 138 NPNEPWVICSVSEDNIMQV 156
Score = 90 (36.7 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 22/98 (22%), Positives = 48/98 (48%)
Query: 234 KIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK--HPSKPDPNGECHPDL 291
K+++ +H+ E+ + ++ P N ++A+ + V+D +K P+ + P+L
Sbjct: 62 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPEL 121
Query: 292 RL--RGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI 327
GH + SWNP+ + S S+D+ + +W +
Sbjct: 122 LFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQM 159
Score = 58 (25.5 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 9/28 (32%), Positives = 19/28 (67%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKI 28
+ ++P++E ILA+ D+ + +WDL +
Sbjct: 34 LSFNPYSEFILATGSADKTVALWDLRNL 61
>GENEDB_PFALCIPARUM|PF13_0149 [details] [associations]
symbol:PF13_0149 "chromatin assembly factor 1
subunit, putative" species:5833 "Plasmodium falciparum" [GO:0006333
"chromatin assembly or disassembly" evidence=ISS] [GO:0051082
"unfolded protein binding" evidence=ISS] [GO:0042393 "histone
binding" evidence=ISS] [GO:0003682 "chromatin binding"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0051082 GO:GO:0003682 GO:GO:0006333
GO:GO:0042393 GO:GO:0005678 EMBL:AL844509 KO:K10752
InterPro:IPR022052 Pfam:PF12265 OMA:EVNYLSF RefSeq:XP_001350006.1
ProteinModelPortal:Q8IE52 EnsemblProtists:PF13_0149:mRNA
GeneID:814119 KEGG:pfa:PF13_0149 EuPathDB:PlasmoDB:PF3D7_1329300
HOGENOM:HOG000283238 ProtClustDB:CLSZ2500737 Uniprot:Q8IE52
Length = 582
Score = 338 (124.0 bits), Expect = 7.6e-37, Sum P(2) = 7.6e-37
Identities = 71/202 (35%), Positives = 108/202 (53%)
Query: 111 LYDLVMTHALEWPSLTAQWLPDVTRVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWL 170
+YD ++ L P + + NE + IW+KNTPFLY ++ H L+WPSLT ++L
Sbjct: 11 IYDFKESYELNTPIENEVTENNYVDIQNERHIIWRKNTPFLYSSLLKHKLDWPSLTVEFL 70
Query: 171 PDVTRPEGK-DYSIHRLILGTHTSDEQ-NHLLIASVQLPNEDAQFDASNYDTDKGDFGGF 228
+ K +Y ++++LGTHTS++ ++ I ++ P + D Y+ G
Sbjct: 71 GGDNSFKSKLNYFTNKVLLGTHTSNQDLEYVYIGEIKCPIFSIKEDVLQYENYSGFISNK 130
Query: 229 GSVSG----KIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPN 284
G E++ K+ H GEV RA +P N I T+T + + L+FDYTKHPS P
Sbjct: 131 KKKKGHPLPSFEVKAKLLHPGEVIRATNLPSNSFFIVTQTSNGNALLFDYTKHPSFPSDM 190
Query: 285 GECHPDLRLRGHQKEGYGLSWN 306
C+P + L+GH EG GL WN
Sbjct: 191 STCYPQMILKGHTNEGSGLCWN 212
Score = 120 (47.3 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 87 PFDDAVEER----VINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWL 130
P ++ V E + NE + IW+KNTPFLY ++ H L+WPSLT ++L
Sbjct: 23 PIENEVTENNYVDIQNERHIIWRKNTPFLYSSLLKHKLDWPSLTVEFL 70
Score = 85 (35.0 bits), Expect = 7.6e-37, Sum P(2) = 7.6e-37
Identities = 25/68 (36%), Positives = 34/68 (50%)
Query: 301 YGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIF-TGHTAVVELELIERLT 359
+G N + N L S S D +ICLWDIN K N V + +G TA +++ E T
Sbjct: 315 FGTEVNTT-NLLLASCSVDGSICLWDINKGTKSNDVPRTYGLNKSGKTADYNIKIYEN-T 372
Query: 360 KKADPVCT 367
P+CT
Sbjct: 373 PTLSPLCT 380
Score = 64 (27.6 bits), Expect = 1.2e-34, Sum P(2) = 1.2e-34
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 291 LRLRGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDIN 328
L+L+ H + + + +G S SDD T C+WDI+
Sbjct: 472 LKLKYHTQGINRIKFGMISSGIFASCSDDGTACIWDIS 509
Score = 46 (21.3 bits), Expect = 9.4e-33, Sum P(2) = 9.4e-33
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 295 GHQKEGYGLSWNPSLNGYLLSASDDHTICLWDIN 328
GH Y L+W S + + D++I +W +N
Sbjct: 543 GHIGSIYDLAWANSNTFTIATVGVDNSIHVWHLN 576
>UNIPROTKB|Q8IE52 [details] [associations]
symbol:PF13_0149 "Chromatin assembly factor 1 subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0003682
"chromatin binding" evidence=ISS] [GO:0006333 "chromatin assembly
or disassembly" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0051082 "unfolded protein binding" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0051082 GO:GO:0003682 GO:GO:0006333
GO:GO:0042393 GO:GO:0005678 EMBL:AL844509 KO:K10752
InterPro:IPR022052 Pfam:PF12265 OMA:EVNYLSF RefSeq:XP_001350006.1
ProteinModelPortal:Q8IE52 EnsemblProtists:PF13_0149:mRNA
GeneID:814119 KEGG:pfa:PF13_0149 EuPathDB:PlasmoDB:PF3D7_1329300
HOGENOM:HOG000283238 ProtClustDB:CLSZ2500737 Uniprot:Q8IE52
Length = 582
Score = 338 (124.0 bits), Expect = 7.6e-37, Sum P(2) = 7.6e-37
Identities = 71/202 (35%), Positives = 108/202 (53%)
Query: 111 LYDLVMTHALEWPSLTAQWLPDVTRVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWL 170
+YD ++ L P + + NE + IW+KNTPFLY ++ H L+WPSLT ++L
Sbjct: 11 IYDFKESYELNTPIENEVTENNYVDIQNERHIIWRKNTPFLYSSLLKHKLDWPSLTVEFL 70
Query: 171 PDVTRPEGK-DYSIHRLILGTHTSDEQ-NHLLIASVQLPNEDAQFDASNYDTDKGDFGGF 228
+ K +Y ++++LGTHTS++ ++ I ++ P + D Y+ G
Sbjct: 71 GGDNSFKSKLNYFTNKVLLGTHTSNQDLEYVYIGEIKCPIFSIKEDVLQYENYSGFISNK 130
Query: 229 GSVSG----KIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPN 284
G E++ K+ H GEV RA +P N I T+T + + L+FDYTKHPS P
Sbjct: 131 KKKKGHPLPSFEVKAKLLHPGEVIRATNLPSNSFFIVTQTSNGNALLFDYTKHPSFPSDM 190
Query: 285 GECHPDLRLRGHQKEGYGLSWN 306
C+P + L+GH EG GL WN
Sbjct: 191 STCYPQMILKGHTNEGSGLCWN 212
Score = 120 (47.3 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 87 PFDDAVEER----VINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWL 130
P ++ V E + NE + IW+KNTPFLY ++ H L+WPSLT ++L
Sbjct: 23 PIENEVTENNYVDIQNERHIIWRKNTPFLYSSLLKHKLDWPSLTVEFL 70
Score = 85 (35.0 bits), Expect = 7.6e-37, Sum P(2) = 7.6e-37
Identities = 25/68 (36%), Positives = 34/68 (50%)
Query: 301 YGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIF-TGHTAVVELELIERLT 359
+G N + N L S S D +ICLWDIN K N V + +G TA +++ E T
Sbjct: 315 FGTEVNTT-NLLLASCSVDGSICLWDINKGTKSNDVPRTYGLNKSGKTADYNIKIYEN-T 372
Query: 360 KKADPVCT 367
P+CT
Sbjct: 373 PTLSPLCT 380
Score = 64 (27.6 bits), Expect = 1.2e-34, Sum P(2) = 1.2e-34
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 291 LRLRGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDIN 328
L+L+ H + + + +G S SDD T C+WDI+
Sbjct: 472 LKLKYHTQGINRIKFGMISSGIFASCSDDGTACIWDIS 509
Score = 46 (21.3 bits), Expect = 9.4e-33, Sum P(2) = 9.4e-33
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 295 GHQKEGYGLSWNPSLNGYLLSASDDHTICLWDIN 328
GH Y L+W S + + D++I +W +N
Sbjct: 543 GHIGSIYDLAWANSNTFTIATVGVDNSIHVWHLN 576
>POMBASE|SPAC25H1.06 [details] [associations]
symbol:pcf3 "CAF assembly factor (CAF-1) complex subunit
C, Pcf3" species:4896 "Schizosaccharomyces pombe" [GO:0000790
"nuclear chromatin" evidence=IC] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006335 "DNA replication-dependent nucleosome assembly"
evidence=IC] [GO:0033186 "CAF-1 complex" evidence=IDA] [GO:0035067
"negative regulation of histone acetylation" evidence=IMP]
[GO:0043596 "nuclear replication fork" evidence=IDA] [GO:0051574
"positive regulation of histone H3-K9 methylation" evidence=IMP]
[GO:0070829 "heterochromatin maintenance" evidence=IMP] [GO:0090053
"positive regulation of chromatin silencing at centromere"
evidence=IMP] [GO:0090055 "positive regulation of chromatin
silencing at silent mating-type cassette" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPAC25H1.06 GO:GO:0005829 EMBL:CU329670 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 GO:GO:0000790
GO:GO:0043596 GO:GO:0006335 GO:GO:0035067 GO:GO:0051574
GO:GO:0033186 KO:K10752 InterPro:IPR022052 Pfam:PF12265
GO:GO:0090055 HOGENOM:HOG000160330 OrthoDB:EOG44TSHP GO:GO:0070829
GO:GO:0090053 PIR:T38386 RefSeq:NP_593810.1
ProteinModelPortal:Q9Y825 STRING:Q9Y825 EnsemblFungi:SPAC25H1.06.1
GeneID:2541656 KEGG:spo:SPAC25H1.06 OMA:MESITEK NextBio:20802749
Uniprot:Q9Y825
Length = 408
Score = 387 (141.3 bits), Expect = 7.2e-36, P = 7.2e-36
Identities = 82/205 (40%), Positives = 123/205 (60%)
Query: 137 INEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDYSIHRLILGTHTSDEQ 196
I+E++ WKKN+ LY+L++T L WPSL+ QWL + K +RL+LGTH ++
Sbjct: 20 ISEDHFRWKKNSKHLYNLLITRTLTWPSLSIQWLSAMESITEKAVLKNRLLLGTHAAEGM 79
Query: 197 -NHLLIASVQLP--NEDAQFDASNYDTDKGDFGGFGSV-SGKIEIEIKINHEGEVNRARY 252
N L +A + LP N+ +Y+ D G+ GG+ S K +I +I H G+VNR R+
Sbjct: 80 PNFLQLADLDLPDFNQTILDPVKHYNEDTGELGGYSMQHSCKFQISQRILHNGDVNRVRH 139
Query: 253 MPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYGLSWNPSLNGY 312
MPQNP +IAT + + +FD TK+ S P E P++ L GH+KEG+GLSWN N
Sbjct: 140 MPQNPNIIATMSSCGNAYIFDRTKYTSMPAE--EFLPNISLIGHKKEGFGLSWNRQQNCR 197
Query: 313 LLSASDDHTICLWDINATPKENRVI 337
L++A++D I WD+N ++ R +
Sbjct: 198 LVTAANDSKILEWDLNNFSRDTRCL 222
Score = 110 (43.8 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 30/84 (35%), Positives = 44/84 (52%)
Query: 94 ERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRVINEEYKIWKKNTPFLYD 153
E I+E++ WKKN+ LY+L++T L WPSL+ QWL + + E + K
Sbjct: 17 ENQISEDHFRWKKNSKHLYNLLITRTLTWPSLSIQWLSAMESIT--EKAVLKNRL----- 69
Query: 154 LVMTHALEWPSLTAQWLPDVTRPE 177
L+ THA E Q L D+ P+
Sbjct: 70 LLGTHAAEGMPNFLQ-LADLDLPD 92
Score = 48 (22.0 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 300 GYGLSWNPSLNGYLLSASDDHTICLWDIN-ATPKE 333
G LSW+ +G ++SA ++ +W+ N A P E
Sbjct: 333 GTSLSWSWRHSGRIVSACQEYCY-VWNFNKANPLE 366
>UNIPROTKB|E9PND5 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] GO:GO:0016581 InterPro:IPR022052
Pfam:PF12265 EMBL:AC114489 HGNC:HGNC:9887 ChiTaRS:RBBP4
IPI:IPI00979287 ProteinModelPortal:E9PND5 SMR:E9PND5
Ensembl:ENST00000490500 ArrayExpress:E9PND5 Bgee:E9PND5
Uniprot:E9PND5
Length = 68
Score = 343 (125.8 bits), Expect = 3.3e-31, P = 3.3e-31
Identities = 61/68 (89%), Positives = 68/68 (100%)
Query: 156 MTHALEWPSLTAQWLPDVTRPEGKDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDA 215
MTHALEWPSLTAQWLPDVTRPEGKD+SIHRL+LGTHTSDEQNHL+IASVQLPN+DAQFDA
Sbjct: 1 MTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDA 60
Query: 216 SNYDTDKG 223
S+YD++KG
Sbjct: 61 SHYDSEKG 68
Score = 118 (46.6 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 21/28 (75%), Positives = 24/28 (85%)
Query: 116 MTHALEWPSLTAQWLPDVTRVINEEYKI 143
MTHALEWPSLTAQWLPDVTR +++ I
Sbjct: 1 MTHALEWPSLTAQWLPDVTRPEGKDFSI 28
>GENEDB_PFALCIPARUM|PF14_0314 [details] [associations]
symbol:PF14_0314 "chromatin assembly factor 1
p55 subunit, putative" species:5833 "Plasmodium falciparum"
[GO:0051082 "unfolded protein binding" evidence=ISS] [GO:0042393
"histone binding" evidence=ISS] [GO:0006334 "nucleosome assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0051082 EMBL:AE014187 GO:GO:0042393
GO:GO:0006334 GO:GO:0005678 KO:K10752 InterPro:IPR022052
Pfam:PF12265 RefSeq:XP_001348488.2 ProteinModelPortal:Q8ILD0
EnsemblProtists:PF14_0314:mRNA GeneID:811896 KEGG:pfa:PF14_0314
EuPathDB:PlasmoDB:PF3D7_1433300 HOGENOM:HOG000281237 Uniprot:Q8ILD0
Length = 428
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 65/200 (32%), Positives = 111/200 (55%)
Query: 139 EEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDYSIHRLILGTHTSDEQNH 198
+ YK W+ NT LY+++M + EWPSL +WLP V + + ++Y+ LILGT+T+++ N+
Sbjct: 30 DNYKYWQYNTILLYNVIMIYTCEWPSLFIEWLPKVYKND-EEYAYQDLILGTYTTEKNNY 88
Query: 199 LLIASVQLPNEDAQFDASNYDTDKGDFGGF-GSVSGKIEIEIKINHEGEVNRARYMPQNP 257
+LI V LP+E+ + + Y+ F S I+ KI HE E+N+ P+N
Sbjct: 89 ILILEVTLPSEEFSYSSFYYEKINDYRHNFCNDTSKNFRIKNKIYHESEINKISCYPENA 148
Query: 258 CVIATKTPSSDVLVFDYTKHPSKPDPNGECHP-----DLRLRGHQKEGYGLSWNPSLNGY 312
++A ++ +F+ + +K D + + D L+GH +G+GL W+ N Y
Sbjct: 149 DIVACFCSDGNINIFNINDYYNKDDEDEIKNDNILTFDKTLKGHLYQGWGLEWDDK-NNY 207
Query: 313 LLSASDDHTICLWDINATPK 332
+ S DD +C+WD+N + K
Sbjct: 208 ISSCGDDSYLCIWDMNTSDK 227
Score = 202 (76.2 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 37/79 (46%), Positives = 57/79 (72%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
++W IL+SS +D+ ++ +D +KIG EQ+ ED++DGPPEL+FIHGGH++ I D+S
Sbjct: 329 LKWDKFQPGILSSSTSDKFIYFFDTNKIGIEQTYEDSQDGPPELIFIHGGHSSNILDYSL 388
Query: 61 NPNEPWVICSVSEDNIMQI 79
N + +I S+SEDN + I
Sbjct: 389 NNSYSMMISSISEDNTLHI 407
Score = 113 (44.8 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 20/43 (46%), Positives = 29/43 (67%)
Query: 99 EEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRVINEEY 141
+ YK W+ NT LY+++M + EWPSL +WLP V + +EEY
Sbjct: 30 DNYKYWQYNTILLYNVIMIYTCEWPSLFIEWLPKVYKN-DEEY 71
Score = 51 (23.0 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 18/89 (20%), Positives = 40/89 (44%)
Query: 241 INHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKP--DPNGECHPDLRL--RGH 296
I+ + + + ++ P ++++ T + FD K + + + + P+L GH
Sbjct: 320 ISQKETIIKLKWDKFQPGILSSSTSDKFIYFFDTNKIGIEQTYEDSQDGPPELIFIHGGH 379
Query: 297 QKEGYGLSWNPSLNGYLLSASDDHTICLW 325
S N S + + S S+D+T+ +W
Sbjct: 380 SSNILDYSLNNSYSMMISSISEDNTLHIW 408
Score = 47 (21.6 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 306 NPSLNGYLLSASDDHTICLWDINATPKE-NRVIDAK 340
NP +A + I LWD+ T K +R+I K
Sbjct: 288 NPHNKNIFATAGTNKEIDLWDMRFTNKSLHRIISQK 323
>UNIPROTKB|Q8ILD0 [details] [associations]
symbol:PF14_0314 "Chromatin assembly factor 1 P55 subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0006334
"nucleosome assembly" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0051082 "unfolded protein binding" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0051082 EMBL:AE014187 GO:GO:0042393
GO:GO:0006334 GO:GO:0005678 KO:K10752 InterPro:IPR022052
Pfam:PF12265 RefSeq:XP_001348488.2 ProteinModelPortal:Q8ILD0
EnsemblProtists:PF14_0314:mRNA GeneID:811896 KEGG:pfa:PF14_0314
EuPathDB:PlasmoDB:PF3D7_1433300 HOGENOM:HOG000281237 Uniprot:Q8ILD0
Length = 428
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 65/200 (32%), Positives = 111/200 (55%)
Query: 139 EEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDYSIHRLILGTHTSDEQNH 198
+ YK W+ NT LY+++M + EWPSL +WLP V + + ++Y+ LILGT+T+++ N+
Sbjct: 30 DNYKYWQYNTILLYNVIMIYTCEWPSLFIEWLPKVYKND-EEYAYQDLILGTYTTEKNNY 88
Query: 199 LLIASVQLPNEDAQFDASNYDTDKGDFGGF-GSVSGKIEIEIKINHEGEVNRARYMPQNP 257
+LI V LP+E+ + + Y+ F S I+ KI HE E+N+ P+N
Sbjct: 89 ILILEVTLPSEEFSYSSFYYEKINDYRHNFCNDTSKNFRIKNKIYHESEINKISCYPENA 148
Query: 258 CVIATKTPSSDVLVFDYTKHPSKPDPNGECHP-----DLRLRGHQKEGYGLSWNPSLNGY 312
++A ++ +F+ + +K D + + D L+GH +G+GL W+ N Y
Sbjct: 149 DIVACFCSDGNINIFNINDYYNKDDEDEIKNDNILTFDKTLKGHLYQGWGLEWDDK-NNY 207
Query: 313 LLSASDDHTICLWDINATPK 332
+ S DD +C+WD+N + K
Sbjct: 208 ISSCGDDSYLCIWDMNTSDK 227
Score = 202 (76.2 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 37/79 (46%), Positives = 57/79 (72%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
++W IL+SS +D+ ++ +D +KIG EQ+ ED++DGPPEL+FIHGGH++ I D+S
Sbjct: 329 LKWDKFQPGILSSSTSDKFIYFFDTNKIGIEQTYEDSQDGPPELIFIHGGHSSNILDYSL 388
Query: 61 NPNEPWVICSVSEDNIMQI 79
N + +I S+SEDN + I
Sbjct: 389 NNSYSMMISSISEDNTLHI 407
Score = 113 (44.8 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 20/43 (46%), Positives = 29/43 (67%)
Query: 99 EEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRVINEEY 141
+ YK W+ NT LY+++M + EWPSL +WLP V + +EEY
Sbjct: 30 DNYKYWQYNTILLYNVIMIYTCEWPSLFIEWLPKVYKN-DEEY 71
Score = 51 (23.0 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 18/89 (20%), Positives = 40/89 (44%)
Query: 241 INHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKP--DPNGECHPDLRL--RGH 296
I+ + + + ++ P ++++ T + FD K + + + + P+L GH
Sbjct: 320 ISQKETIIKLKWDKFQPGILSSSTSDKFIYFFDTNKIGIEQTYEDSQDGPPELIFIHGGH 379
Query: 297 QKEGYGLSWNPSLNGYLLSASDDHTICLW 325
S N S + + S S+D+T+ +W
Sbjct: 380 SSNILDYSLNNSYSMMISSISEDNTLHIW 408
Score = 47 (21.6 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 306 NPSLNGYLLSASDDHTICLWDINATPKE-NRVIDAK 340
NP +A + I LWD+ T K +R+I K
Sbjct: 288 NPHNKNIFATAGTNKEIDLWDMRFTNKSLHRIISQK 323
>SGD|S000000782 [details] [associations]
symbol:HAT2 "Subunit of the Hat1p-Hat2p histone
acetyltransferase complex" species:4932 "Saccharomyces cerevisiae"
[GO:0042393 "histone binding" evidence=IDA] [GO:0000123 "histone
acetyltransferase complex" evidence=IDA;IPI] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0006333 "chromatin assembly or disassembly"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0004402
"histone acetyltransferase activity" evidence=IDA;IMP;IPI]
[GO:0016573 "histone acetylation" evidence=IDA;IMP] [GO:0006348
"chromatin silencing at telomere" evidence=IGI] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000000782 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006281
eggNOG:COG2319 GO:GO:0016573 EMBL:BK006939 GO:GO:0006333
GO:GO:0006348 EMBL:U18795 GO:GO:0042393
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0000123 HOGENOM:HOG000160330 OrthoDB:EOG412QFD
PIR:S50533 RefSeq:NP_010858.3 RefSeq:NP_010861.3
ProteinModelPortal:P39984 SMR:P39984 DIP:DIP-2363N IntAct:P39984
MINT:MINT-654148 STRING:P39984 PaxDb:P39984 PeptideAtlas:P39984
EnsemblFungi:YEL056W GeneID:856654 GeneID:856657 KEGG:sce:YEL053C
KEGG:sce:YEL056W CYGD:YEL056w OMA:VLYDLVI NextBio:982637
Genevestigator:P39984 GermOnline:YEL056W Uniprot:P39984
Length = 401
Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
Identities = 70/194 (36%), Positives = 100/194 (51%)
Query: 137 INEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDYSIHRLILGTHTS-DE 195
++EEY +WK N P +YD V L WPSLT QWLP + + LI+GTHTS +E
Sbjct: 10 VDEEYDLWKSNVPLMYDFVSETRLTWPSLTVQWLPTPVQELDGGFIKQELIIGTHTSGEE 69
Query: 196 QNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQ 255
+N+L A + LP E + + + + I I K HE E+ RARYMPQ
Sbjct: 70 ENYLKFAEINLPKEILSNEDPQEEAGEEYQSSLPAPRSNIRITAKYEHEEEITRARYMPQ 129
Query: 256 NPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYGLSWNPSLNGYLLS 315
+P ++AT V F Y++ L+ H+ GY LS++ + G LLS
Sbjct: 130 DPNIVATINGQGTV--FLYSRSEGLQST---------LKFHKDNGYALSFSTLVKGRLLS 178
Query: 316 ASDDHTICLWDINA 329
SDDHT+ LW++ +
Sbjct: 179 GSDDHTVALWEVGS 192
Score = 233 (87.1 bits), Expect = 2.2e-17, P = 2.2e-17
Identities = 37/79 (46%), Positives = 58/79 (73%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
+++S H + ++ SSG+D RL +WDL +IG EQ+ +DAEDG PEL+ +H GH + ++DF
Sbjct: 301 LEFSTHVDGVVVSSGSDNRLMMWDLKQIGAEQTPDDAEDGVPELIMVHAGHRSSVNDFDL 360
Query: 61 NPNEPWVICSVSEDNIMQI 79
NP PW++ S E+NI+Q+
Sbjct: 361 NPQIPWLVASAEEENILQV 379
Score = 126 (49.4 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 20/35 (57%), Positives = 24/35 (68%)
Query: 97 INEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLP 131
++EEY +WK N P +YD V L WPSLT QWLP
Sbjct: 10 VDEEYDLWKSNVPLMYDFVSETRLTWPSLTVQWLP 44
Score = 61 (26.5 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 11/48 (22%), Positives = 25/48 (52%)
Query: 293 LRGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAK 340
+ GH+ L ++ ++G ++S+ D+ + +WD+ E DA+
Sbjct: 291 MSGHEDAVNNLEFSTHVDGVVVSSGSDNRLMMWDLKQIGAEQTPDDAE 338
Score = 58 (25.5 bits), Expect = 7.1e-07, Sum P(2) = 7.1e-07
Identities = 17/87 (19%), Positives = 39/87 (44%)
Query: 243 HEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSK--PDPNGECHPDLRL--RGHQK 298
HE VN + V+ + + ++++D + ++ PD + P+L + GH+
Sbjct: 294 HEDAVNNLEFSTHVDGVVVSSGSDNRLMMWDLKQIGAEQTPDDAEDGVPELIMVHAGHRS 353
Query: 299 EGYGLSWNPSLNGYLLSASDDHTICLW 325
NP + + SA +++ + +W
Sbjct: 354 SVNDFDLNPQIPWLVASAEEENILQVW 380
>UNIPROTKB|Q5JNZ6 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9606
"Homo sapiens" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0000122 HOGENOM:HOG000160330 EMBL:AL929302 UniGene:Hs.495755
HGNC:HGNC:9890 ChiTaRS:RBBP7 SMR:Q5JNZ6 Ensembl:ENST00000425696
Uniprot:Q5JNZ6
Length = 85
Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
Identities = 58/60 (96%), Positives = 59/60 (98%)
Query: 20 LHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQI 79
L+VWDLSKIGEEQS EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQI
Sbjct: 1 LNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQI 60
>UNIPROTKB|C9J7L0 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9606
"Homo sapiens" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] GO:GO:0005634 GO:GO:0000122
InterPro:IPR022052 Pfam:PF12265 EMBL:AL929302 HGNC:HGNC:9890
ChiTaRS:RBBP7 IPI:IPI00947544 ProteinModelPortal:C9J7L0 SMR:C9J7L0
STRING:C9J7L0 Ensembl:ENST00000468092 ArrayExpress:C9J7L0
Bgee:C9J7L0 Uniprot:C9J7L0
Length = 68
Score = 302 (111.4 bits), Expect = 7.3e-27, P = 7.3e-27
Identities = 51/68 (75%), Positives = 63/68 (92%)
Query: 156 MTHALEWPSLTAQWLPDVTRPEGKDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDA 215
MTHAL+WPSLT QWLP+VT+PEGKDY++H L+LGTHTSDEQNHL++A V +PN+DAQFDA
Sbjct: 1 MTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDA 60
Query: 216 SNYDTDKG 223
S+ D+DKG
Sbjct: 61 SHCDSDKG 68
Score = 107 (42.7 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 116 MTHALEWPSLTAQWLPDVTRVINEEYKI-W 144
MTHAL+WPSLT QWLP+VT+ ++Y + W
Sbjct: 1 MTHALQWPSLTVQWLPEVTKPEGKDYALHW 30
>POMBASE|SPAC29A4.18 [details] [associations]
symbol:prw1 "Clr6 histone deacetylase complex subunit
Prw1" species:4896 "Schizosaccharomyces pombe" [GO:0000070 "mitotic
sister chromatid segregation" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006338 "chromatin
remodeling" evidence=IC] [GO:0006342 "chromatin silencing"
evidence=ISO] [GO:0016575 "histone deacetylation" evidence=IMP]
[GO:0030261 "chromosome condensation" evidence=IMP] [GO:0032221
"Rpd3S complex" evidence=IDA] [GO:0033698 "Rpd3L complex"
evidence=IDA] [GO:0070210 "Rpd3L-Expanded complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPAC29A4.18 GO:GO:0005829 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338
GO:GO:0000070 GO:GO:0006342 GO:GO:0030261 GO:GO:0033698
GO:GO:0070210 GO:GO:0016575 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0032221 HOGENOM:HOG000160330 PIR:T38471
RefSeq:NP_594864.1 ProteinModelPortal:O14021 DIP:DIP-29342N
IntAct:O14021 STRING:O14021 EnsemblFungi:SPAC29A4.18.1
GeneID:2541804 KEGG:spo:SPAC29A4.18 OMA:HISSHEK OrthoDB:EOG4MWCH4
NextBio:20802892 Uniprot:O14021
Length = 431
Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
Identities = 76/215 (35%), Positives = 108/215 (50%)
Query: 135 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDYSIHRLILGTHTSD 194
+ INEEYKIWKKN+PFLYDL++T ALEWP ++ QW P+ Y+ ++ LG +D
Sbjct: 24 KCINEEYKIWKKNSPFLYDLIITRALEWPCMSLQWYPEQQIFAEHGYTEQKMFLGVR-AD 82
Query: 195 EQNHLL-IASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYM 253
+LL +AS+QLP + + T +G G S S ++ I +H V A+ M
Sbjct: 83 VGKYLLAVASIQLPYLNQTVPPT---TMEGASAGDES-SLRVNISNLYSHPESVCSAKLM 138
Query: 254 PQNP-CVIATKTPSSDVLVFDYTKHPSKPDPN-GECHPDLRLRGHQKEGYGLSWNPSLNG 311
PQ+ CV +DVLVFD S + P RL H + + WN G
Sbjct: 139 PQDDSCVATVGNYHNDVLVFDKESFESYSSASESPLKPKYRLTKHTQPCTSVCWNFLSKG 198
Query: 312 YLLSASDDHTICLWDINATPKENRVIDAKTIFTGH 346
L+S S D T+ WD+NA + + K + H
Sbjct: 199 TLVSGSQDATLSCWDLNAYNESDSASVLKVHISSH 233
Score = 264 (98.0 bits), Expect = 2.6e-21, P = 2.6e-21
Identities = 46/79 (58%), Positives = 59/79 (74%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
+ +SPH E ILAS+ DRR VWDLS+IGE+Q E+A+DGPPELLF+HGGHT+ D W
Sbjct: 331 ISFSPHEEPILASTSADRRTLVWDLSRIGEDQPAEEAQDGPPELLFMHGGHTSCTIDMDW 390
Query: 61 NPNEPWVICSVSEDNIMQI 79
PN W + + +EDNI+QI
Sbjct: 391 CPNYNWTMATAAEDNILQI 409
Score = 173 (66.0 bits), Expect = 4.8e-14, Sum P(2) = 4.8e-14
Identities = 54/157 (34%), Positives = 75/157 (47%)
Query: 93 EERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRVINEEYKIWKKNTPFLY 152
+E+ INEEYKIWKKN+PFLYDL++T ALEWP ++ QW P+ Y K
Sbjct: 22 QEKCINEEYKIWKKNSPFLYDLIITRALEWPCMSLQWYPEQQIFAEHGYTEQKMFLGVRA 81
Query: 153 D----LVMTHALEWPSLTAQWLPDVTRPEGKDYSIHRLILGTHTSDEQNHL-LIASVQL- 206
D L+ +++ P L Q +P T EG L + S+ +H + S +L
Sbjct: 82 DVGKYLLAVASIQLPYLN-QTVPPTTM-EGASAG-DESSLRVNISNLYSHPESVCSAKLM 138
Query: 207 PNEDAQF-DASNYDTDKGDFG--GFGSVSGKIEIEIK 240
P +D+ NY D F F S S E +K
Sbjct: 139 PQDDSCVATVGNYHNDVLVFDKESFESYSSASESPLK 175
Score = 76 (31.8 bits), Expect = 4.8e-14, Sum P(2) = 4.8e-14
Identities = 20/89 (22%), Positives = 42/89 (47%)
Query: 243 HEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK----HPSKPDPNGECHPDLRLR--GH 296
HE V + + P ++A+ + LV+D ++ P++ +G P+L GH
Sbjct: 324 HEDIVTKISFSPHEEPILASTSADRRTLVWDLSRIGEDQPAEEAQDGP--PELLFMHGGH 381
Query: 297 QKEGYGLSWNPSLNGYLLSASDDHTICLW 325
+ W P+ N + +A++D+ + +W
Sbjct: 382 TSCTIDMDWCPNYNWTMATAAEDNILQIW 410
Score = 74 (31.1 bits), Expect = 7.7e-14, Sum P(2) = 7.7e-14
Identities = 22/105 (20%), Positives = 47/105 (44%)
Query: 224 DFGGFGSVSGKIEIEIKIN-HEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPD 282
D + +++ I+ HE +V+ R+ ++ ++A+ + + V D +
Sbjct: 213 DLNAYNESDSASVLKVHISSHEKQVSDVRFHYKHQDLLASVSYDQYLHVHDIRR------ 266
Query: 283 PNGECHPDLRLRGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI 327
P+ P + H + +++NP + L + S D TI LWD+
Sbjct: 267 PDASTKPARSVHAHSGPIHSVAFNPHNDFILATCSTDKTIALWDL 311
Score = 71 (30.1 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 21/98 (21%), Positives = 42/98 (42%)
Query: 243 HEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYG 302
H G ++ + P N ++AT + + ++D + N H L GH+
Sbjct: 280 HSGPIHSVAFNPHNDFILATCSTDKTIALWDLR------NLNQRLHT---LEGHEDIVTK 330
Query: 303 LSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAK 340
+S++P L S S D +WD++ ++ +A+
Sbjct: 331 ISFSPHEEPILASTSADRRTLVWDLSRIGEDQPAEEAQ 368
>CGD|CAL0005992 [details] [associations]
symbol:orf19.3581 species:5476 "Candida albicans" [GO:0042393
"histone binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0006335
"DNA replication-dependent nucleosome assembly" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0005992 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 EMBL:AACQ01000094
EMBL:AACQ01000093 InterPro:IPR022052 Pfam:PF12265
HOGENOM:HOG000160330 RefSeq:XP_714940.1 RefSeq:XP_715003.1
ProteinModelPortal:Q59ZD9 STRING:Q59ZD9 GeneID:3643390
GeneID:3643420 KEGG:cal:CaO19.11065 KEGG:cal:CaO19.3581
Uniprot:Q59ZD9
Length = 435
Score = 232 (86.7 bits), Expect = 8.0e-21, Sum P(2) = 8.0e-21
Identities = 50/154 (32%), Positives = 91/154 (59%)
Query: 139 EEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTR----PEGKDYS---IHRLILGTH 191
+ Y++WKKN P LYD ++T++L WPSL+ Q+ PD+T E K+ R++LGT
Sbjct: 41 QNYRVWKKNAPLLYDYLVTNSLLWPSLSVQFFPDITHINDLGENKNEEQIIAQRILLGTF 100
Query: 192 TSDEQ-NHLLIASVQLP-----NEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEG 245
T + +H+ I +Q+P N++ + + +++ ++ +F K + KINH G
Sbjct: 101 TLGQAIDHISI--LQIPSFKNLNQNIKINKLDFNPEREEFELTTPSLNKTKTLQKINHLG 158
Query: 246 EVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPS 279
+VN+ RYMPQ P ++A+ ++++++ T+H S
Sbjct: 159 DVNKVRYMPQKPNILASANNLGNLVIYERTRHKS 192
Score = 145 (56.1 bits), Expect = 1.3e-17, Sum P(2) = 1.3e-17
Identities = 47/187 (25%), Positives = 93/187 (49%)
Query: 162 WPSLTAQWLPDVTRPEGKDYSI-HRLILGTHTSDEQ-NHLLIASVQLP-----NEDAQFD 214
+P +T + D+ + ++ I R++LGT T + +H+ I +Q+P N++ + +
Sbjct: 72 FPDITH--INDLGENKNEEQIIAQRILLGTFTLGQAIDHISI--LQIPSFKNLNQNIKIN 127
Query: 215 ASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDY 274
+++ ++ +F K + KINH G+VN+ RYMPQ P ++A+ ++++++
Sbjct: 128 KLDFNPEREEFELTTPSLNKTKTLQKINHLGDVNKVRYMPQKPNILASANNLGNLVIYER 187
Query: 275 TKHPSKP----DPNGECHPDLRL-RGH---QKEGYGLSWNPSLNGYLLSASDDHTICLWD 326
T+H S D +RL H + + + WN + G LLSA + + L+D
Sbjct: 188 TRHKSFKNTILDDTDLSKVQVRLVNKHIPSTTDIFAIDWNRNSEGLLLSADMNGLVNLYD 247
Query: 327 INATPKE 333
+ E
Sbjct: 248 LKKYESE 254
Score = 142 (55.0 bits), Expect = 1.3e-17, Sum P(2) = 1.3e-17
Identities = 25/52 (48%), Positives = 37/52 (71%)
Query: 89 DDAVEERVINEE----YKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRV 136
D VEE I+E+ Y++WKKN P LYD ++T++L WPSL+ Q+ PD+T +
Sbjct: 27 DTPVEESAIDEKTQQNYRVWKKNAPLLYDYLVTNSLLWPSLSVQFFPDITHI 78
Score = 71 (30.1 bits), Expect = 8.0e-21, Sum P(2) = 8.0e-21
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 293 LRGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDIN 328
L GH L WNP + L S+S DH++ L D++
Sbjct: 349 LHGHSDSVTQLKWNPKCHNILGSSSSDHSVKLHDMS 384
>CGD|CAL0005349 [details] [associations]
symbol:HAT2 species:5476 "Candida albicans" [GO:0000123
"histone acetyltransferase complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA;IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA;IDA] [GO:0016573 "histone acetylation"
evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:2000221
"negative regulation of pseudohyphal growth" evidence=IMP]
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
[GO:0034614 "cellular response to reactive oxygen species"
evidence=IMP] [GO:0006333 "chromatin assembly or disassembly"
evidence=IEA] [GO:0006348 "chromatin silencing at telomere"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005349 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006281 eggNOG:COG2319 GO:GO:0016568
KO:K10752 InterPro:IPR022052 Pfam:PF12265 EMBL:AACQ01000162
EMBL:AACQ01000158 RefSeq:XP_712278.1 RefSeq:XP_712421.1
ProteinModelPortal:Q59RH5 STRING:Q59RH5 GeneID:3645973
GeneID:3646093 KEGG:cal:CaO19.2146 KEGG:cal:CaO19.9693
Uniprot:Q59RH5
Length = 382
Score = 249 (92.7 bits), Expect = 1.4e-19, P = 1.4e-19
Identities = 43/82 (52%), Positives = 61/82 (74%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
+++SPH++ ILA+ DRR+ +WDL K+GEEQ EDAEDG PEL +H GHTA +SD SW
Sbjct: 283 MEFSPHHDGILATGSQDRRIIIWDLFKVGEEQQQEDAEDGCPELFMMHAGHTAGVSDLSW 342
Query: 61 NPNEPWVICSVSEDNIMQILSV 82
P + W+I SV++DNI+ + +
Sbjct: 343 CPFKDWMIGSVADDNIVHLWEI 364
Score = 176 (67.0 bits), Expect = 1.8e-20, Sum P(2) = 1.8e-20
Identities = 38/79 (48%), Positives = 51/79 (64%)
Query: 137 INEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDYSIHRLILGTHTSDEQ 196
I EEY++W+KN ++Y+ V AL WPSLT QWLP+ T G + +L+LGTHTS++
Sbjct: 11 IKEEYQLWRKNCRYMYEFVSETALMWPSLTIQWLPNYTTTNGLIDA--KLLLGTHTSNQS 68
Query: 197 -NHLLIASVQL---PNEDA 211
N L +AS QL PN A
Sbjct: 69 ANQLKVASTQLSADPNVKA 87
Score = 132 (51.5 bits), Expect = 1.8e-20, Sum P(2) = 1.8e-20
Identities = 31/95 (32%), Positives = 49/95 (51%)
Query: 232 SGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDL 291
+ KI+ K+ + E+ RARYMPQ+ ++AT +V +++ H
Sbjct: 88 NSKIKTVQKLENNAEICRARYMPQDANIVATINGLGEVDLYNLDTETRYS------H--- 138
Query: 292 RLRGHQKEGYGLSWNPSLNGYLLSASDDHTICLWD 326
H K GYGLSWNP G L++ +DD+ +C+ D
Sbjct: 139 -FAPHTKNGYGLSWNPKQKGLLVTGADDNFVCVTD 172
Score = 128 (50.1 bits), Expect = 7.2e-15, Sum P(2) = 7.2e-15
Identities = 22/46 (47%), Positives = 30/46 (65%)
Query: 89 DDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVT 134
+ E I EEY++W+KN ++Y+ V AL WPSLT QWLP+ T
Sbjct: 3 EQPTEPLSIKEEYQLWRKNCRYMYEFVSETALMWPSLTIQWLPNYT 48
Score = 84 (34.6 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 26/110 (23%), Positives = 48/110 (43%)
Query: 224 DFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK---HPSK 280
D G SG + + H + + P + ++AT + ++++D K +
Sbjct: 259 DLRKLGENSGLLHT--MMGHSEGITCMEFSPHHDGILATGSQDRRIIIWDLFKVGEEQQQ 316
Query: 281 PDPNGECHPDLRLR--GHQKEGYGLSWNPSLNGYLLSASDDHTICLWDIN 328
D C P+L + GH LSW P + + S +DD+ + LW+I+
Sbjct: 317 EDAEDGC-PELFMMHAGHTAGVSDLSWCPFKDWMIGSVADDNIVHLWEIS 365
Score = 76 (31.8 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 30/130 (23%), Positives = 55/130 (42%)
Query: 228 FGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGEC 287
F + K+ + +N + P ++A SS++ + D K + +G
Sbjct: 214 FDARDNKVVSQYYAESSNGINSLAFSPFAENLVAIGNTSSNINLLDLRK---LGENSGLL 270
Query: 288 HPDLRLRGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKT----IF 343
H + GH + + ++P +G L + S D I +WD+ +E + DA+ +F
Sbjct: 271 HT---MMGHSEGITCMEFSPHHDGILATGSQDRRIIIWDLFKVGEEQQQEDAEDGCPELF 327
Query: 344 ---TGHTAVV 350
GHTA V
Sbjct: 328 MMHAGHTAGV 337
>UNIPROTKB|Q59RH5 [details] [associations]
symbol:HAT2 "Histone acetyltransferase type B subunit 2"
species:237561 "Candida albicans SC5314" [GO:0005634 "nucleus"
evidence=IDA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0034614 "cellular response to reactive oxygen species"
evidence=IMP] [GO:2000221 "negative regulation of pseudohyphal
growth" evidence=IMP] [GO:0004402 "histone acetyltransferase
activity" evidence=IDA] [GO:0042393 "histone binding" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0005349 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006281
eggNOG:COG2319 GO:GO:0016568 KO:K10752 InterPro:IPR022052
Pfam:PF12265 EMBL:AACQ01000162 EMBL:AACQ01000158 RefSeq:XP_712278.1
RefSeq:XP_712421.1 ProteinModelPortal:Q59RH5 STRING:Q59RH5
GeneID:3645973 GeneID:3646093 KEGG:cal:CaO19.2146
KEGG:cal:CaO19.9693 Uniprot:Q59RH5
Length = 382
Score = 249 (92.7 bits), Expect = 1.4e-19, P = 1.4e-19
Identities = 43/82 (52%), Positives = 61/82 (74%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
+++SPH++ ILA+ DRR+ +WDL K+GEEQ EDAEDG PEL +H GHTA +SD SW
Sbjct: 283 MEFSPHHDGILATGSQDRRIIIWDLFKVGEEQQQEDAEDGCPELFMMHAGHTAGVSDLSW 342
Query: 61 NPNEPWVICSVSEDNIMQILSV 82
P + W+I SV++DNI+ + +
Sbjct: 343 CPFKDWMIGSVADDNIVHLWEI 364
Score = 176 (67.0 bits), Expect = 1.8e-20, Sum P(2) = 1.8e-20
Identities = 38/79 (48%), Positives = 51/79 (64%)
Query: 137 INEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDYSIHRLILGTHTSDEQ 196
I EEY++W+KN ++Y+ V AL WPSLT QWLP+ T G + +L+LGTHTS++
Sbjct: 11 IKEEYQLWRKNCRYMYEFVSETALMWPSLTIQWLPNYTTTNGLIDA--KLLLGTHTSNQS 68
Query: 197 -NHLLIASVQL---PNEDA 211
N L +AS QL PN A
Sbjct: 69 ANQLKVASTQLSADPNVKA 87
Score = 132 (51.5 bits), Expect = 1.8e-20, Sum P(2) = 1.8e-20
Identities = 31/95 (32%), Positives = 49/95 (51%)
Query: 232 SGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDL 291
+ KI+ K+ + E+ RARYMPQ+ ++AT +V +++ H
Sbjct: 88 NSKIKTVQKLENNAEICRARYMPQDANIVATINGLGEVDLYNLDTETRYS------H--- 138
Query: 292 RLRGHQKEGYGLSWNPSLNGYLLSASDDHTICLWD 326
H K GYGLSWNP G L++ +DD+ +C+ D
Sbjct: 139 -FAPHTKNGYGLSWNPKQKGLLVTGADDNFVCVTD 172
Score = 128 (50.1 bits), Expect = 7.2e-15, Sum P(2) = 7.2e-15
Identities = 22/46 (47%), Positives = 30/46 (65%)
Query: 89 DDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVT 134
+ E I EEY++W+KN ++Y+ V AL WPSLT QWLP+ T
Sbjct: 3 EQPTEPLSIKEEYQLWRKNCRYMYEFVSETALMWPSLTIQWLPNYT 48
Score = 84 (34.6 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 26/110 (23%), Positives = 48/110 (43%)
Query: 224 DFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK---HPSK 280
D G SG + + H + + P + ++AT + ++++D K +
Sbjct: 259 DLRKLGENSGLLHT--MMGHSEGITCMEFSPHHDGILATGSQDRRIIIWDLFKVGEEQQQ 316
Query: 281 PDPNGECHPDLRLR--GHQKEGYGLSWNPSLNGYLLSASDDHTICLWDIN 328
D C P+L + GH LSW P + + S +DD+ + LW+I+
Sbjct: 317 EDAEDGC-PELFMMHAGHTAGVSDLSWCPFKDWMIGSVADDNIVHLWEIS 365
Score = 76 (31.8 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 30/130 (23%), Positives = 55/130 (42%)
Query: 228 FGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGEC 287
F + K+ + +N + P ++A SS++ + D K + +G
Sbjct: 214 FDARDNKVVSQYYAESSNGINSLAFSPFAENLVAIGNTSSNINLLDLRK---LGENSGLL 270
Query: 288 HPDLRLRGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKT----IF 343
H + GH + + ++P +G L + S D I +WD+ +E + DA+ +F
Sbjct: 271 HT---MMGHSEGITCMEFSPHHDGILATGSQDRRIIIWDLFKVGEEQQQEDAEDGCPELF 327
Query: 344 ---TGHTAVV 350
GHTA V
Sbjct: 328 MMHAGHTAGV 337
>GENEDB_PFALCIPARUM|PFA0520c [details] [associations]
symbol:PFA0520c "chromatin assembly factor 1
protein WD40 domain, putative" species:5833 "Plasmodium falciparum"
[GO:0051082 "unfolded protein binding" evidence=ISS] [GO:0042393
"histone binding" evidence=ISS] [GO:0006334 "nucleosome assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0051082
GO:GO:0042393 GO:GO:0006334 GO:GO:0005678 KO:K10752
InterPro:IPR022052 Pfam:PF12265 EMBL:AL844501 OMA:VLYDLVI
RefSeq:XP_001351036.1 ProteinModelPortal:Q8I238 PRIDE:Q8I238
EnsemblProtists:PFA0520c:mRNA GeneID:813241 KEGG:pfa:PFA_0520c
HOGENOM:HOG000283790 ProtClustDB:CLSZ2433094 Uniprot:Q8I238
Length = 446
Score = 249 (92.7 bits), Expect = 3.4e-19, P = 3.4e-19
Identities = 60/196 (30%), Positives = 105/196 (53%)
Query: 137 INEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDYSIHRLI-LGTHTSD- 194
+ ++ WK N+ LYD V LEWPSL+ + D ++ +++++ +GTHTS+
Sbjct: 43 VETQFNNWKTNSGLLYDFVCRKELEWPSLSVDF-GDFHHENLENNVLNQIVCVGTHTSNK 101
Query: 195 EQNHLLIASVQLPNEDAQFDASNYDTDKGDFG-GFGSVSGKIEIEIKINHEGEVNRARYM 253
E N L + V P E + Y +++ G F S K I+ KI H GEVNR +++
Sbjct: 102 EPNFLYVCDVLFPLEQVPQEKCIYKSNENYEGFDFCSEKKKFTIKSKIAHTGEVNRIKFV 161
Query: 254 P-QNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYGLSWNPSLNGY 312
P + + TK +V +FD KH + + + +P++ G+Q +G+GL + P + Y
Sbjct: 162 PLEKKNFVVTKAVDGNVHLFDINKHKIET-VDDKMNPEVSFVGNQSDGFGLDFQP-IKKY 219
Query: 313 LLSASDDHTICLWDIN 328
+L+ ++D I ++D N
Sbjct: 220 ILTCANDGLINVYDYN 235
Score = 196 (74.1 bits), Expect = 7.2e-13, P = 7.2e-13
Identities = 38/80 (47%), Positives = 56/80 (70%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
+ +SP++ +ILAS+ +R ++V+DL+KIGEE D DGP EL+F HGGHT ++DF+W
Sbjct: 344 LNFSPNDASILASASNNRFINVYDLNKIGEELDAIDLSDGPSELIFSHGGHTQPVTDFNW 403
Query: 61 NPNEP--WVICSVSEDNIMQ 78
N ++ I S SEDN +Q
Sbjct: 404 NHHKKLKMFIGSTSEDNTLQ 423
Score = 87 (35.7 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 16/40 (40%), Positives = 22/40 (55%)
Query: 90 DAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQW 129
D EE + ++ WK N+ LYD V LEWPSL+ +
Sbjct: 36 DEDEEEDVETQFNNWKTNSGLLYDFVCRKELEWPSLSVDF 75
Score = 77 (32.2 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 36/147 (24%), Positives = 66/147 (44%)
Query: 219 DTDKGDFGGFGSVSGKIEI-EIKINHEGE--VN-------RARYMPQNPCVIATKTPSSD 268
+T G F GS +GKI++ ++K HE + +N R + P + ++A+ + +
Sbjct: 304 NTFTGLFAS-GSDNGKIKVWDLKKFHEPQHIINAHKEAIIRLNFSPNDASILASASNNRF 362
Query: 269 VLVFDYTKHPSKPDP----NGECHPDLRLRGHQKEGYGLSWN--PSLNGYLLSASDDHTI 322
+ V+D K + D +G GH + +WN L ++ S S+D+T+
Sbjct: 363 INVYDLNKIGEELDAIDLSDGPSELIFSHGGHTQPVTDFNWNHHKKLKMFIGSTSEDNTL 422
Query: 323 CLWDINATPKENRVIDAKTIFTGHTAV 349
W + K + + TI T +T V
Sbjct: 423 QFWQL----KSELLDETNTIPTSNTDV 445
>UNIPROTKB|Q8I238 [details] [associations]
symbol:PFA_0520c "Chromatin assembly factor 1 protein WD40
domain, putative" species:36329 "Plasmodium falciparum 3D7"
[GO:0006334 "nucleosome assembly" evidence=ISS] [GO:0042393
"histone binding" evidence=ISS] [GO:0051082 "unfolded protein
binding" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0051082
GO:GO:0042393 GO:GO:0006334 GO:GO:0005678 KO:K10752
InterPro:IPR022052 Pfam:PF12265 EMBL:AL844501 OMA:VLYDLVI
RefSeq:XP_001351036.1 ProteinModelPortal:Q8I238 PRIDE:Q8I238
EnsemblProtists:PFA0520c:mRNA GeneID:813241 KEGG:pfa:PFA_0520c
HOGENOM:HOG000283790 ProtClustDB:CLSZ2433094 Uniprot:Q8I238
Length = 446
Score = 249 (92.7 bits), Expect = 3.4e-19, P = 3.4e-19
Identities = 60/196 (30%), Positives = 105/196 (53%)
Query: 137 INEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDYSIHRLI-LGTHTSD- 194
+ ++ WK N+ LYD V LEWPSL+ + D ++ +++++ +GTHTS+
Sbjct: 43 VETQFNNWKTNSGLLYDFVCRKELEWPSLSVDF-GDFHHENLENNVLNQIVCVGTHTSNK 101
Query: 195 EQNHLLIASVQLPNEDAQFDASNYDTDKGDFG-GFGSVSGKIEIEIKINHEGEVNRARYM 253
E N L + V P E + Y +++ G F S K I+ KI H GEVNR +++
Sbjct: 102 EPNFLYVCDVLFPLEQVPQEKCIYKSNENYEGFDFCSEKKKFTIKSKIAHTGEVNRIKFV 161
Query: 254 P-QNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYGLSWNPSLNGY 312
P + + TK +V +FD KH + + + +P++ G+Q +G+GL + P + Y
Sbjct: 162 PLEKKNFVVTKAVDGNVHLFDINKHKIET-VDDKMNPEVSFVGNQSDGFGLDFQP-IKKY 219
Query: 313 LLSASDDHTICLWDIN 328
+L+ ++D I ++D N
Sbjct: 220 ILTCANDGLINVYDYN 235
Score = 196 (74.1 bits), Expect = 7.2e-13, P = 7.2e-13
Identities = 38/80 (47%), Positives = 56/80 (70%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
+ +SP++ +ILAS+ +R ++V+DL+KIGEE D DGP EL+F HGGHT ++DF+W
Sbjct: 344 LNFSPNDASILASASNNRFINVYDLNKIGEELDAIDLSDGPSELIFSHGGHTQPVTDFNW 403
Query: 61 NPNEP--WVICSVSEDNIMQ 78
N ++ I S SEDN +Q
Sbjct: 404 NHHKKLKMFIGSTSEDNTLQ 423
Score = 87 (35.7 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 16/40 (40%), Positives = 22/40 (55%)
Query: 90 DAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQW 129
D EE + ++ WK N+ LYD V LEWPSL+ +
Sbjct: 36 DEDEEEDVETQFNNWKTNSGLLYDFVCRKELEWPSLSVDF 75
Score = 77 (32.2 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 36/147 (24%), Positives = 66/147 (44%)
Query: 219 DTDKGDFGGFGSVSGKIEI-EIKINHEGE--VN-------RARYMPQNPCVIATKTPSSD 268
+T G F GS +GKI++ ++K HE + +N R + P + ++A+ + +
Sbjct: 304 NTFTGLFAS-GSDNGKIKVWDLKKFHEPQHIINAHKEAIIRLNFSPNDASILASASNNRF 362
Query: 269 VLVFDYTKHPSKPDP----NGECHPDLRLRGHQKEGYGLSWN--PSLNGYLLSASDDHTI 322
+ V+D K + D +G GH + +WN L ++ S S+D+T+
Sbjct: 363 INVYDLNKIGEELDAIDLSDGPSELIFSHGGHTQPVTDFNWNHHKKLKMFIGSTSEDNTL 422
Query: 323 CLWDINATPKENRVIDAKTIFTGHTAV 349
W + K + + TI T +T V
Sbjct: 423 QFWQL----KSELLDETNTIPTSNTDV 445
>SGD|S000000399 [details] [associations]
symbol:MSI1 "Subunit of chromatin assembly factor I (CAF-1)"
species:4932 "Saccharomyces cerevisiae" [GO:0033186 "CAF-1 complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005737
"cytoplasm" evidence=IEA;IDA] [GO:0006335 "DNA
replication-dependent nucleosome assembly" evidence=IDA]
[GO:0042393 "histone binding" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000000399 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 EMBL:BK006936 EMBL:Z21487
GO:GO:0006335 GO:GO:0033186 InterPro:IPR022052 Pfam:PF12265
HOGENOM:HOG000160330 EMBL:M27300 EMBL:Z36064 EMBL:AY692834
PIR:S07865 RefSeq:NP_009754.1 ProteinModelPortal:P13712 SMR:P13712
DIP:DIP-338N IntAct:P13712 MINT:MINT-386252 STRING:P13712
PaxDb:P13712 PeptideAtlas:P13712 EnsemblFungi:YBR195C GeneID:852494
KEGG:sce:YBR195C CYGD:YBR195c OMA:MPDVTKT OrthoDB:EOG44TSHP
NextBio:971486 Genevestigator:P13712 GermOnline:YBR195C
Uniprot:P13712
Length = 422
Score = 221 (82.9 bits), Expect = 3.7e-19, Sum P(2) = 3.7e-19
Identities = 53/150 (35%), Positives = 78/150 (52%)
Query: 137 INEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDYSIHRLILGTHTSD-- 194
+ E Y WKKNT LYD + T++ +WPSLT Q+ PD+ + HR++L + TS
Sbjct: 19 LQERYSHWKKNTKLLYDYLNTNSTKWPSLTCQFFPDLDTTSDE----HRILLSSFTSSQK 74
Query: 195 -EQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSV---SGKIEIEIKINH-EGEVNR 249
E + I+ + +N+D D+ +F S S + +I I GE NR
Sbjct: 75 PEDETIYISKISTLGHIKWSSLNNFDMDEMEFKPENSTRFPSKHLVNDISIFFPNGECNR 134
Query: 250 ARYMPQNPCVIATKTPSSDVLVFDYTKHPS 279
ARY+PQNP +IA + + +FD TKH S
Sbjct: 135 ARYLPQNPDIIAGASSDGAIYIFDRTKHGS 164
Score = 141 (54.7 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 29/80 (36%), Positives = 48/80 (60%)
Query: 1 VQWSPHNETILASSGT-DRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFS 59
++WSP+ +T+LA++G D + +WD S E E +F HGGH ++D S
Sbjct: 346 LEWSPNFDTVLATAGQEDGLVKLWDTS----------CE----ETIFTHGGHMLGVNDIS 391
Query: 60 WNPNEPWVICSVSEDNIMQI 79
W+ ++PW++CSV+ DN + I
Sbjct: 392 WDAHDPWLMCSVANDNSVHI 411
Score = 120 (47.3 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 21/47 (44%), Positives = 32/47 (68%)
Query: 97 INEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRVINEEYKI 143
+ E Y WKKNT LYD + T++ +WPSLT Q+ PD+ ++E++I
Sbjct: 19 LQERYSHWKKNTKLLYDYLNTNSTKWPSLTCQFFPDLDTT-SDEHRI 64
Score = 68 (29.0 bits), Expect = 3.7e-19, Sum P(2) = 3.7e-19
Identities = 14/40 (35%), Positives = 20/40 (50%)
Query: 299 EGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVID 338
E L+WN LLS+ + + +WDI EN +ID
Sbjct: 202 EATSLAWNLQQEALLLSSHSNGQVQVWDIKQYSHENPIID 241
Score = 62 (26.9 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 20/85 (23%), Positives = 36/85 (42%)
Query: 243 HEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYG 302
H+G VN R+ +N ++A+ + + ++D P E H
Sbjct: 295 HDGGVNSCRFNYKNSLILASADSNGRLNLWDIRNMNKSPIATME---------HGTSVST 345
Query: 303 LSWNPSLNGYLLSAS-DDHTICLWD 326
L W+P+ + L +A +D + LWD
Sbjct: 346 LEWSPNFDTVLATAGQEDGLVKLWD 370
Score = 56 (24.8 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 25/90 (27%), Positives = 38/90 (42%)
Query: 239 IKINHEGE-VNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQ 297
+ IN +G VN +MP + + A T + V + D K N E H D + +
Sbjct: 245 VSINSDGTAVNDVTWMPTHDSLFAACTEGNAVSLLDLRTKKEKLQSNREKH-DGGVNSCR 303
Query: 298 KEGYGLSWNPSLNGYLLSASDDHTICLWDI 327
++ SL L SA + + LWDI
Sbjct: 304 -----FNYKNSL--ILASADSNGRLNLWDI 326
Score = 40 (19.1 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 29/125 (23%), Positives = 51/125 (40%)
Query: 246 EVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYGLSW 305
+++ + P+N +K +D+ +F PNGEC+ R R Y L
Sbjct: 100 DMDEMEFKPENSTRFPSKHLVNDISIFF---------PNGECN---RAR------Y-LPQ 140
Query: 306 NPSLNGYLLSASDDHTICLWDINATPKENRVIDAKT-------IFTGHTAVVELELIERL 358
NP + + AS D I ++D R+ +K +F H + ++E ++
Sbjct: 141 NPDI---IAGASSDGAIYIFD-RTKHGSTRIRQSKISHPFETKLFGSHGVIQDVEAMD-- 194
Query: 359 TKKAD 363
T AD
Sbjct: 195 TSSAD 199
Score = 39 (18.8 bits), Expect = 3.9e-16, Sum P(2) = 3.9e-16
Identities = 7/31 (22%), Positives = 16/31 (51%)
Query: 295 GHQKEGYGLSWNPSLNGYLLSASDDHTICLW 325
GH +SW+ + S ++D+++ +W
Sbjct: 382 GHMLGVNDISWDAHDPWLMCSVANDNSVHIW 412
>TAIR|locus:2050372 [details] [associations]
symbol:FVE species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0009826 "unidimensional
cell growth" evidence=IMP] [GO:0009908 "flower development"
evidence=IMP] [GO:0009965 "leaf morphogenesis" evidence=IMP]
[GO:0010090 "trichome morphogenesis" evidence=IMP] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=ISS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006281 "DNA repair"
evidence=IMP] [GO:0010224 "response to UV-B" evidence=IEP]
[GO:0046872 "metal ion binding" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 GO:GO:0030154
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005730 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0046872
GO:GO:0006281 eggNOG:COG2319 GO:GO:0006351 GO:GO:0016568
EMBL:AC005917 GO:GO:0009908 GO:GO:0010224 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000160330
EMBL:AF498101 EMBL:AF498102 EMBL:AY849994 EMBL:AY059799
EMBL:AY057655 EMBL:AY081447 EMBL:AF028711 EMBL:Z37286 EMBL:Z37287
IPI:IPI00539247 PIR:G84577 RefSeq:NP_565456.2 UniGene:At.20032
ProteinModelPortal:O22607 SMR:O22607 DIP:DIP-59614N STRING:O22607
PaxDb:O22607 PRIDE:O22607 EnsemblPlants:AT2G19520.1 GeneID:816471
KEGG:ath:AT2G19520 GeneFarm:2818 TAIR:At2g19520 InParanoid:O22607
OMA:CIRELEQ PhylomeDB:O22607 ProtClustDB:CLSN2918036
Genevestigator:O22607 GermOnline:AT2G19520 Uniprot:O22607
Length = 507
Score = 234 (87.4 bits), Expect = 3.7e-17, P = 3.7e-17
Identities = 65/197 (32%), Positives = 99/197 (50%)
Query: 137 INEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDYSIHRLILGTHTSDE- 195
++E+Y WK P LYD + H L WPSL+ +W P + + K+ RL L T
Sbjct: 64 VDEKYSQWKGLVPILYDWLANHNLVWPSLSCRWGPQLEQATYKNRQ--RLYLSEQTDGSV 121
Query: 196 QNHLLIASVQL--PNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYM 253
N L+IA+ ++ P A S ++ + + S ++ I H GEVNR R +
Sbjct: 122 PNTLVIANCEVVKPRVAAAEHISQFNEE--------ARSPFVKKYKTIIHPGEVNRIREL 173
Query: 254 PQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECH--PDLRLRGHQKEG-YGLSWNPSLN 310
PQN ++AT T S DVL++D P++ G + PDL L GHQ + L+ P+
Sbjct: 174 PQNSKIVATHTDSPDVLIWDVETQPNRHAVLGAANSRPDLILTGHQDNAEFALAMCPT-E 232
Query: 311 GYLLSASDDHTICLWDI 327
++LS D ++ LW I
Sbjct: 233 PFVLSGGKDKSVVLWSI 249
Score = 173 (66.0 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
VQWSP ++ SS D L++WD ++ ++ ++ A P L F H GH K+ DF W
Sbjct: 392 VQWSPDKSSVFGSSAEDGLLNIWDYDRVSKK--SDRAAKSPAGLFFQHAGHRDKVVDFHW 449
Query: 61 NPNEPWVICSVSED 74
N ++PW I SVS+D
Sbjct: 450 NASDPWTIVSVSDD 463
Score = 98 (39.6 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 16/37 (43%), Positives = 23/37 (62%)
Query: 97 INEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDV 133
++E+Y WK P LYD + H L WPSL+ +W P +
Sbjct: 64 VDEKYSQWKGLVPILYDWLANHNLVWPSLSCRWGPQL 100
Score = 84 (34.6 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 20/92 (21%), Positives = 44/92 (47%)
Query: 243 HEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYG 302
H+ +++ + P + +I T + + V +FD K + NG P + GH+
Sbjct: 336 HDADLHCVDWNPHDDNLILTGSADNTVRLFDRRKLTA----NGVGSPIYKFEGHKAAVLC 391
Query: 303 LSWNPSLNGYLLSASDDHTICLWDINATPKEN 334
+ W+P + S+++D + +WD + K++
Sbjct: 392 VQWSPDKSSVFGSSAEDGLLNIWDYDRVSKKS 423
Score = 66 (28.3 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 33/141 (23%), Positives = 54/141 (38%)
Query: 218 YDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKH 277
+D K G GS K E H+ V ++ P V + + ++DY +
Sbjct: 365 FDRRKLTANGVGSPIYKFE-----GHKAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYDRV 419
Query: 278 PSKPDPNGECHPDLRLR--GHQKEGYGLSWNPSLNGYLLSASDD-------HTICLW--- 325
K D + L + GH+ + WN S ++S SDD T+ +W
Sbjct: 420 SKKSDRAAKSPAGLFFQHAGHRDKVVDFHWNASDPWTIVSVSDDCETTGGGGTLQIWRMS 479
Query: 326 DINATPKENRVIDAKTIFTGH 346
D+ P+E V + + F H
Sbjct: 480 DLIYRPEEEVVAELEK-FKSH 499
Score = 63 (27.2 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 17/57 (29%), Positives = 27/57 (47%)
Query: 294 RGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVV 350
+ H + + + WNP + +L+ S D+T+ L+D N V F GH A V
Sbjct: 334 KAHDADLHCVDWNPHDDNLILTGSADNTVRLFDRRKLTA-NGVGSPIYKFEGHKAAV 389
>CGD|CAL0003130 [details] [associations]
symbol:orf19.7185 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0003130 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR022052 Pfam:PF12265 EMBL:AACQ01000089
RefSeq:XP_715234.1 RefSeq:XP_889000.1 ProteinModelPortal:Q5A0B0
GeneID:3643101 GeneID:3704066 KEGG:cal:CaO19.7185
KEGG:cal:CaO19_7185 HOGENOM:HOG000137539 Uniprot:Q5A0B0
Length = 485
Score = 163 (62.4 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 31/75 (41%), Positives = 49/75 (65%)
Query: 135 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDYSIHRLILGTHTSD 194
+++NEE+KIWKK P LYD + T AL+ PSL QWLP T D + + ++GT+ +
Sbjct: 70 KIVNEEFKIWKKTVPLLYDFIHTFALDNPSLVFQWLP-TTSVSQSDLEL-KFLIGTNAIN 127
Query: 195 E-QNHLLIASVQLPN 208
+ +N+L + S+ LP+
Sbjct: 128 KSENYLKLTSISLPS 142
Score = 142 (55.0 bits), Expect = 6.2e-09, Sum P(2) = 6.2e-09
Identities = 25/55 (45%), Positives = 37/55 (67%)
Query: 89 DDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRVINEEYKI 143
+ ++E+++NEE+KIWKK P LYD + T AL+ PSL QWLP T V + ++
Sbjct: 64 EQQLQEKIVNEEFKIWKKTVPLLYDFIHTFALDNPSLVFQWLP-TTSVSQSDLEL 117
Score = 126 (49.4 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 37/119 (31%), Positives = 60/119 (50%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDA-EDGP-------------PELLF 46
+QW +N IL S G D+R+ WDL + E+ + DA +G P L +
Sbjct: 350 LQWDWNNPDILVSCGLDKRIIFWDLKNLDEDFTYPDATSNGKDTNSKRKQAVKTDPCLKY 409
Query: 47 IHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIL---SVVCVEPFDDAVEERVINEEYK 102
+HGGHT + +DF +P + SV +D +++I S+ EP ++ E + +EE K
Sbjct: 410 VHGGHTRRTNDFDIHPKVKNIFGSVGDDKLLEIWKPKSLPGDEPEQESTEVQE-DEEMK 467
Score = 63 (27.2 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 15/38 (39%), Positives = 23/38 (60%)
Query: 296 HQKEGYGLSWNPSLNGYLLSASDDHTICLWDIN--ATP 331
H++ G L W + NG+L S S+D I LW ++ +TP
Sbjct: 212 HKQGGIALDWVDN-NGFL-SGSNDAQIALWQVDKSSTP 247
Score = 46 (21.3 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 13/51 (25%), Positives = 20/51 (39%)
Query: 289 PDLRLRGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDA 339
P + GH L W+ + L+S D I WD+ ++ DA
Sbjct: 336 PFRKFYGHNDSVRQLQWDWNNPDILVSCGLDKRIIFWDLKNLDEDFTYPDA 386
Score = 39 (18.8 bits), Expect = 7.5e-09, Sum P(2) = 7.5e-09
Identities = 8/37 (21%), Positives = 14/37 (37%)
Query: 295 GHQKEGYGLSWNPSLNGYLLSASDDHTICLWDINATP 331
GH + +P + S DD + +W + P
Sbjct: 413 GHTRRTNDFDIHPKVKNIFGSVGDDKLLEIWKPKSLP 449
>UNIPROTKB|Q5A0B0 [details] [associations]
symbol:CaO19.7185 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0003130 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR022052 Pfam:PF12265 EMBL:AACQ01000089
RefSeq:XP_715234.1 RefSeq:XP_889000.1 ProteinModelPortal:Q5A0B0
GeneID:3643101 GeneID:3704066 KEGG:cal:CaO19.7185
KEGG:cal:CaO19_7185 HOGENOM:HOG000137539 Uniprot:Q5A0B0
Length = 485
Score = 163 (62.4 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 31/75 (41%), Positives = 49/75 (65%)
Query: 135 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDYSIHRLILGTHTSD 194
+++NEE+KIWKK P LYD + T AL+ PSL QWLP T D + + ++GT+ +
Sbjct: 70 KIVNEEFKIWKKTVPLLYDFIHTFALDNPSLVFQWLP-TTSVSQSDLEL-KFLIGTNAIN 127
Query: 195 E-QNHLLIASVQLPN 208
+ +N+L + S+ LP+
Sbjct: 128 KSENYLKLTSISLPS 142
Score = 142 (55.0 bits), Expect = 6.2e-09, Sum P(2) = 6.2e-09
Identities = 25/55 (45%), Positives = 37/55 (67%)
Query: 89 DDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRVINEEYKI 143
+ ++E+++NEE+KIWKK P LYD + T AL+ PSL QWLP T V + ++
Sbjct: 64 EQQLQEKIVNEEFKIWKKTVPLLYDFIHTFALDNPSLVFQWLP-TTSVSQSDLEL 117
Score = 126 (49.4 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 37/119 (31%), Positives = 60/119 (50%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDA-EDGP-------------PELLF 46
+QW +N IL S G D+R+ WDL + E+ + DA +G P L +
Sbjct: 350 LQWDWNNPDILVSCGLDKRIIFWDLKNLDEDFTYPDATSNGKDTNSKRKQAVKTDPCLKY 409
Query: 47 IHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIL---SVVCVEPFDDAVEERVINEEYK 102
+HGGHT + +DF +P + SV +D +++I S+ EP ++ E + +EE K
Sbjct: 410 VHGGHTRRTNDFDIHPKVKNIFGSVGDDKLLEIWKPKSLPGDEPEQESTEVQE-DEEMK 467
Score = 63 (27.2 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 15/38 (39%), Positives = 23/38 (60%)
Query: 296 HQKEGYGLSWNPSLNGYLLSASDDHTICLWDIN--ATP 331
H++ G L W + NG+L S S+D I LW ++ +TP
Sbjct: 212 HKQGGIALDWVDN-NGFL-SGSNDAQIALWQVDKSSTP 247
Score = 46 (21.3 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 13/51 (25%), Positives = 20/51 (39%)
Query: 289 PDLRLRGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDA 339
P + GH L W+ + L+S D I WD+ ++ DA
Sbjct: 336 PFRKFYGHNDSVRQLQWDWNNPDILVSCGLDKRIIFWDLKNLDEDFTYPDA 386
Score = 39 (18.8 bits), Expect = 7.5e-09, Sum P(2) = 7.5e-09
Identities = 8/37 (21%), Positives = 14/37 (37%)
Query: 295 GHQKEGYGLSWNPSLNGYLLSASDDHTICLWDINATP 331
GH + +P + S DD + +W + P
Sbjct: 413 GHTRRTNDFDIHPKVKNIFGSVGDDKLLEIWKPKSLP 449
>DICTYBASE|DDB_G0291566 [details] [associations]
symbol:grwd1 "glutamate-rich WD repeat-containing
protein 1" species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0291566 EMBL:AAFI02000177 GenomeReviews:CM000155_GR
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052
Pfam:PF12265 KO:K14848 OMA:NRLMMLR RefSeq:XP_635306.1
ProteinModelPortal:Q54ED4 STRING:Q54ED4 EnsemblProtists:DDB0267050
GeneID:8628250 KEGG:ddi:DDB_G0291566 ProtClustDB:CLSZ2732316
Uniprot:Q54ED4
Length = 482
Score = 168 (64.2 bits), Expect = 7.5e-10, Sum P(2) = 7.5e-10
Identities = 56/214 (26%), Positives = 99/214 (46%)
Query: 152 YDLVMTHALEWPSLTAQWLPDVTRPEGKDYSIHR--LILGTHTSDEQNH--LLIASVQL- 206
YD++ + ++EWP L+ + D + Y H L+ GT + +N+ +++ + QL
Sbjct: 92 YDMMHSMSVEWPCLSFHPIKDELGAQRNKYP-HTMYLVAGTQADEAKNNKVIIMKAKQLH 150
Query: 207 ----PNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIK-INHEGEVNRARYMPQNPCVIA 261
+ED+ D + D ++ D E+++ INH G VNR R M Q ++A
Sbjct: 151 KTKHDDEDSDDDEDSDDDEESDDEDDEDKDVDPELQLAFINHNGAVNRIRSMDQQSNIVA 210
Query: 262 TKTPSSDVLVFDYTKHPSKPDPNG----ECHPDLRLRGHQKEGYGLSWNPSLNGYLLSAS 317
T + + V +++ H D + P + H EGY L W+P + G L +
Sbjct: 211 TWSDNRSVYIWNIANHLKALDNETVAPKQTAPLHTISNHSIEGYALDWSPKIAGRLATGD 270
Query: 318 DDHTICLWDINATPKENRVIDAKTIFTGHTAVVE 351
+++I + NA+ + D + F GHT VE
Sbjct: 271 CNNSIFV--TNASESTWKT-DTQA-FKGHTESVE 300
Score = 43 (20.2 bits), Expect = 7.5e-10, Sum P(2) = 7.5e-10
Identities = 7/21 (33%), Positives = 14/21 (66%)
Query: 112 YDLVMTHALEWPSLTAQWLPD 132
YD++ + ++EWP L+ + D
Sbjct: 92 YDMMHSMSVEWPCLSFHPIKD 112
>TAIR|locus:2134408 [details] [associations]
symbol:NFC5 "AT4G29730" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006351 GO:GO:0016568
EMBL:AL161575 EMBL:AL079344 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000160330
ProtClustDB:CLSN2918036 EMBL:BT010610 EMBL:AK176425 IPI:IPI00548369
PIR:T09936 RefSeq:NP_194702.2 UniGene:At.31893
ProteinModelPortal:Q9SU78 SMR:Q9SU78 STRING:Q9SU78 PaxDb:Q9SU78
PRIDE:Q9SU78 EnsemblPlants:AT4G29730.1 GeneID:829094
KEGG:ath:AT4G29730 GeneFarm:2946 TAIR:At4g29730 InParanoid:Q9SU78
OMA:VGKKSER PhylomeDB:Q9SU78 Genevestigator:Q9SU78
GermOnline:AT4G29730 Uniprot:Q9SU78
Length = 487
Score = 163 (62.4 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 33/79 (41%), Positives = 44/79 (55%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
VQWSP ++ SS D L++WD ++G++ +E A P L F H GH K+ DF W
Sbjct: 372 VQWSPDKSSVFGSSAEDGLLNIWDCDRVGKK--SERATKTPDGLFFQHAGHRDKVVDFHW 429
Query: 61 NPNEPWVICSVSEDNIMQI 79
+ PW I SVS DN I
Sbjct: 430 SLLNPWTIVSVS-DNCESI 447
Score = 149 (57.5 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 34/90 (37%), Positives = 52/90 (57%)
Query: 241 INHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNG--ECHPDLRLRGHQK 298
I H GEVNR R +PQN ++AT T S D+L+++ P + G + PDL L GHQ
Sbjct: 141 IIHPGEVNRIRELPQNSKIVATHTDSPDILIWNTETQPDRYAVLGAPDSRPDLLLIGHQD 200
Query: 299 EG-YGLSWNPSLNGYLLSASDDHTICLWDI 327
+ + L+ P+ ++LS D ++ LW+I
Sbjct: 201 DAEFALAMCPT-EPFVLSGGKDKSVILWNI 229
>TAIR|locus:2050388 [details] [associations]
symbol:AT2G19540 "AT2G19540" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319 EMBL:AC005917
InterPro:IPR022052 Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000036730
KO:K14848 OMA:NRLMMLR UniGene:At.24966 EMBL:AF370506 EMBL:AY128814
IPI:IPI00526267 PIR:A84578 RefSeq:NP_179544.1
ProteinModelPortal:Q9ZUN8 SMR:Q9ZUN8 STRING:Q9ZUN8 PaxDb:Q9ZUN8
PRIDE:Q9ZUN8 EnsemblPlants:AT2G19540.1 GeneID:816473
KEGG:ath:AT2G19540 TAIR:At2g19540 InParanoid:Q9ZUN8
PhylomeDB:Q9ZUN8 ProtClustDB:CLSN2683177 ArrayExpress:Q9ZUN8
Genevestigator:Q9ZUN8 Uniprot:Q9ZUN8
Length = 469
Score = 149 (57.5 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 50/155 (32%), Positives = 69/155 (44%)
Query: 208 NEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSS 267
+ED + D S+ D D GD S + I++ ++ H G VNR R MPQN + + S
Sbjct: 128 DEDDE-DDSDSDDDDGDEA---SKTPNIQVR-RVAHHGCVNRIRAMPQNSHICVSWADSG 182
Query: 268 DVLVFDYTKH-----PSKPDPNGECHPDLR------LRGHQKEGYGLSWNPSLNGYLLSA 316
V V+D + H S+ + P L GH+ EGY + W+P+ G LLS
Sbjct: 183 HVQVWDMSSHLNALAESETEGKDGTSPVLNQAPLVNFSGHKDEGYAIDWSPATAGRLLSG 242
Query: 317 SDDHTICLWDINATPKENRVIDAKTIFTGHTAVVE 351
I LW+ P F GHTA VE
Sbjct: 243 DCKSMIHLWE----PASGSWAVDPIPFAGHTASVE 273
>ZFIN|ZDB-GENE-030131-9844 [details] [associations]
symbol:grwd1 "glutamate-rich WD repeat containing
1" species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-9844
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 GeneTree:ENSGT00550000075124
EMBL:CU459065 IPI:IPI00490298 Ensembl:ENSDART00000121998
ArrayExpress:F1QGP3 Bgee:F1QGP3 Uniprot:F1QGP3
Length = 452
Score = 141 (54.7 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 32/86 (37%), Positives = 49/86 (56%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQS--TEDAEDGPPELLFIHGGHTAKISDF 58
VQWSP + ++ A+SG D + WDLS + ED + PP+LLF+H G ++ +
Sbjct: 368 VQWSPVDSSVFAASGADDVISQWDLSVESCDMGGQAEDVKQLPPQLLFLHQGQK-EVKEL 426
Query: 59 SWNPNEPWVICS--VSEDNIMQILSV 82
W+P P V+ S +S NI + +SV
Sbjct: 427 HWHPQIPGVLISTALSGFNIFRTISV 452
>FB|FBgn0022288 [details] [associations]
symbol:l(2)09851 "lethal (2) 09851" species:7227 "Drosophila
melanogaster" [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE013599 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 GeneTree:ENSGT00550000075124
KO:K14848 OMA:NRLMMLR EMBL:AY071477 EMBL:AY128462
RefSeq:NP_610182.3 UniGene:Dm.1493 UniGene:Dm.36762 SMR:Q8SYL1
IntAct:Q8SYL1 STRING:Q8SYL1 EnsemblMetazoa:FBtr0086043 GeneID:46662
KEGG:dme:Dmel_CG12792 UCSC:CG12792-RA FlyBase:FBgn0022288
InParanoid:Q8SYL1 OrthoDB:EOG441NSN GenomeRNAi:46662 NextBio:838859
Uniprot:Q8SYL1
Length = 456
Score = 141 (54.7 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 33/91 (36%), Positives = 53/91 (58%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGE-EQSTEDAEDG------PPELLFIHGGHTA 53
V+WSP T+LAS G D ++ +WDL+ + +Q+ + A++ PP+LLFIH G
Sbjct: 367 VEWSPAEATVLASGGDDDQIALWDLAVEKDIDQAVDPAQNEDVLNKLPPQLLFIHQGQK- 425
Query: 54 KISDFSWNPNEPWVICSVSED--NIMQILSV 82
+I + W+P P V+ S + NI + +SV
Sbjct: 426 EIKELHWHPQLPGVLLSTAHSGFNIFRTISV 456
Score = 109 (43.4 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 32/117 (27%), Positives = 51/117 (43%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
+ WSP + +LA+ R +HVW + + E T + P GH+ + D W
Sbjct: 228 IDWSPSADGVLATGDCRRDIHVW--TPV--EDGTWKVDQRPL------AGHSQSVEDLQW 277
Query: 61 NPNEPWVICSVSEDNIMQILSV------VCVEPFDDAVEERVINEEYKIWKKNTPFL 111
+PNE V+ S S D ++I C+ +DA + V W +N PF+
Sbjct: 278 SPNERSVLASCSVDKTIRIWDCRASPQKACMLTCEDAHQSDV---NVISWNRNEPFI 331
Score = 65 (27.9 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 22/96 (22%), Positives = 38/96 (39%)
Query: 243 HEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYG 302
H+ +VN + P IA+ + ++D + SK P + H
Sbjct: 315 HQSDVNVISWNRNEP-FIASGGDDGYLHIWDLRQFQSKK-------PIATFKHHTDHITT 366
Query: 303 LSWNPSLNGYLLSASDDHTICLWDINATPKENRVID 338
+ W+P+ L S DD I LWD+ ++ +D
Sbjct: 367 VEWSPAEATVLASGGDDDQIALWDLAVEKDIDQAVD 402
Score = 50 (22.7 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 27/120 (22%), Positives = 42/120 (35%)
Query: 208 NEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSS 267
N + F AS D K I +H + + P V+A+
Sbjct: 325 NRNEPFIASGGDDGYLHIWDLRQFQSKKPIATFKHHTDHITTVEWSPAEATVLASGGDDD 384
Query: 268 DVLVFDYTKH--------PSK-PDPNGECHPDLR-LRGHQKEGYGLSWNPSLNGYLLSAS 317
+ ++D P++ D + P L + QKE L W+P L G LLS +
Sbjct: 385 QIALWDLAVEKDIDQAVDPAQNEDVLNKLPPQLLFIHQGQKEIKELHWHPQLPGVLLSTA 444
>ASPGD|ASPL0000069856 [details] [associations]
symbol:AN7205 species:162425 "Emericella nidulans"
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0042254 "ribosome biogenesis" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001304 InterPro:IPR022052
Pfam:PF12265 HOGENOM:HOG000036730 OMA:NRLMMLR
EnsemblFungi:CADANIAT00000249 Uniprot:C8VD17
Length = 492
Score = 129 (50.5 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 58/223 (26%), Positives = 92/223 (41%)
Query: 149 PFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDY--SIHRLILGTHTSD---EQNHLLIAS 203
P YD++ T + WP L+ + D K Y +++ + GT ++N L++
Sbjct: 93 PSTYDMLHTLSTPWPCLSFDIVRDTLGDNRKTYPATVYA-VTGTQAEGRRAKENELMVLK 151
Query: 204 VQ-LPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQN----P- 257
+ L + + + + D GG + K I + RA PQ+ P
Sbjct: 152 LSGLGKMERENETDSESDSDDDEGGEAILEHK---SIPLGSTANRIRAHQTPQSDITKPP 208
Query: 258 -CVIATKTPSSDVLVFDYTKHPSKPD------PNGECHPDLRLRGHQKEGYGLSWNPSLN 310
+ AT +S V++ D T H + D P P LR H+ EGY L W+P L+
Sbjct: 209 QTITATMLENSQVVIHDVTPHLTSFDVPGTMLPPSASKPLSTLRMHKSEGYALDWSP-LH 267
Query: 311 --GYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVE 351
G LL+ +D I + T V D + F GH + VE
Sbjct: 268 PLGKLLTGDNDGLIYV--TTRTEGGGWVTDTRA-FRGHASSVE 307
Score = 41 (19.5 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 109 PFLYDLVMTHALEWPSLT 126
P YD++ T + WP L+
Sbjct: 93 PSTYDMLHTLSTPWPCLS 110
>POMBASE|SPBC1711.07 [details] [associations]
symbol:SPBC1711.07 "WD repeat protein Rrb1 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0005829
"cytosol" evidence=IDA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=ISS] [GO:0043234
"protein complex" evidence=NAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC1711.07 GO:GO:0005829
GO:GO:0043234 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319
GenomeReviews:CU329671_GR GO:GO:0042254 GO:GO:0006364
InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000036730 KO:K14848
OMA:NRLMMLR RefSeq:NP_595880.1 ProteinModelPortal:Q9P783
STRING:Q9P783 EnsemblFungi:SPBC1711.07.1 GeneID:2539693
KEGG:spo:SPBC1711.07 OrthoDB:EOG4XWK6B NextBio:20800846
Uniprot:Q9P783
Length = 480
Score = 126 (49.4 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 25/81 (30%), Positives = 46/81 (56%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLS-KIGEEQ----STEDAEDGPPELLFIHGGHTAKI 55
++W P+ ++++ G D ++ +WDLS ++ EE+ + E +D PP+L+FIH G +I
Sbjct: 393 IEWHPNEDSVIGVVGADNQISLWDLSVELDEEEQDSRAAEGLQDVPPQLMFIHMGQQ-EI 451
Query: 56 SDFSWNPNEPWVICSVSEDNI 76
+ W+ P I S + I
Sbjct: 452 KEMHWHRQIPGTIVSTAMTGI 472
>UNIPROTKB|Q292E8 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:46245 "Drosophila pseudoobscura
pseudoobscura" [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CM000071 GenomeReviews:CM000071_GR OMA:SWKCVCT
OrthoDB:EOG45DV4X HSSP:P63005 RefSeq:XP_001360339.1
ProteinModelPortal:Q292E8 GeneID:4803656 KEGG:dpo:Dpse_GA11817
FlyBase:FBgn0071866 InParanoid:Q292E8 Uniprot:Q292E8
Length = 335
Score = 96 (38.9 bits), Expect = 7.0e-05, Sum P(2) = 7.0e-05
Identities = 20/70 (28%), Positives = 35/70 (50%)
Query: 259 VIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYGLSWNPSLNGYLLSASD 318
+IAT + +F T + +P E H+++ + WNP++ G L+S SD
Sbjct: 266 LIATGCGDDGIRIFKETSDSKRDEPTFE-QLTAEETAHEQDVNAVEWNPAVAGQLISCSD 324
Query: 319 DHTICLWDIN 328
D TI +W ++
Sbjct: 325 DGTIKIWKVD 334
Score = 69 (29.3 bits), Expect = 7.0e-05, Sum P(2) = 7.0e-05
Identities = 30/108 (27%), Positives = 43/108 (39%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
V W P + AS G D+ + VW LS G ST+ + GH I + W
Sbjct: 20 VAWHPKGN-VFASCGEDKAIRVWSLS--GNTWSTKT---------ILSDGHKRTIREIRW 67
Query: 61 NPNEPWVICSVSEDNIMQILSVVCVEPFDDAVEERVINEEYKI-WKKN 107
+P + + S S D I S E +A E NE + W ++
Sbjct: 68 SPCGQY-LASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRS 114
Score = 60 (26.2 bits), Expect = 0.00058, Sum P(2) = 0.00058
Identities = 17/81 (20%), Positives = 39/81 (48%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
V WS + +LA+ D+ + +W+++ G+++ E + HT + W
Sbjct: 109 VSWS-RSGGLLATCSRDKSVWIWEVA--GDDEF---------ECAAVLNAHTQDVKRVVW 156
Query: 61 NPNEPWVICSVSEDNIMQILS 81
+P + ++ S S DN +++ +
Sbjct: 157 HPTKD-ILASASYDNTIKMFA 176
>UNIPROTKB|B4GDM7 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7234 "Drosophila persimilis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH479181 OrthoDB:EOG45DV4X RefSeq:XP_002015794.1
ProteinModelPortal:B4GDM7 GeneID:6591258 KEGG:dpe:Dper_GL10827
FlyBase:FBgn0148437 Uniprot:B4GDM7
Length = 335
Score = 95 (38.5 bits), Expect = 9.1e-05, Sum P(2) = 9.1e-05
Identities = 20/69 (28%), Positives = 34/69 (49%)
Query: 259 VIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYGLSWNPSLNGYLLSASD 318
+IAT + +F T + +P E H+++ + WNP++ G L+S SD
Sbjct: 266 LIATGCGDDGIRIFKETSDSKRDEPTFE-QLTAEETAHEQDVNAVEWNPAVAGQLISCSD 324
Query: 319 DHTICLWDI 327
D TI +W +
Sbjct: 325 DGTIKIWKV 333
Score = 69 (29.3 bits), Expect = 9.1e-05, Sum P(2) = 9.1e-05
Identities = 30/108 (27%), Positives = 43/108 (39%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
V W P + AS G D+ + VW LS G ST+ + GH I + W
Sbjct: 20 VAWHPKGN-VFASCGEDKAIRVWSLS--GNTWSTKT---------ILSDGHKRTIREIRW 67
Query: 61 NPNEPWVICSVSEDNIMQILSVVCVEPFDDAVEERVINEEYKI-WKKN 107
+P + + S S D I S E +A E NE + W ++
Sbjct: 68 SPCGQY-LASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRS 114
Score = 60 (26.2 bits), Expect = 0.00075, Sum P(2) = 0.00075
Identities = 17/81 (20%), Positives = 39/81 (48%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
V WS + +LA+ D+ + +W+++ G+++ E + HT + W
Sbjct: 109 VSWS-RSGGLLATCSRDKSVWIWEVA--GDDEF---------ECAAVLNAHTQDVKRVVW 156
Query: 61 NPNEPWVICSVSEDNIMQILS 81
+P + ++ S S DN +++ +
Sbjct: 157 HPTKD-ILASASYDNTIKMFA 176
>UNIPROTKB|E2RBY0 [details] [associations]
symbol:GRWD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
CTD:83743 GeneTree:ENSGT00550000075124 KO:K14848 OMA:NRLMMLR
EMBL:AAEX03000823 RefSeq:XP_854878.1 ProteinModelPortal:E2RBY0
Ensembl:ENSCAFT00000006420 GeneID:612058 KEGG:cfa:612058
NextBio:20897592 Uniprot:E2RBY0
Length = 440
Score = 123 (48.4 bits), Expect = 0.00012, P = 0.00012
Identities = 27/89 (30%), Positives = 48/89 (53%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLS-----KIGEEQSTEDAEDGPPELLFIHGGHTAKI 55
V+W P + + A+SG D ++ WDL+ + G+ ++ D P +LLF+H G T +
Sbjct: 353 VEWHPQDSGVFAASGADNQITQWDLAVERDPEAGDTETDPGLADLPQQLLFVHQGET-DL 411
Query: 56 SDFSWNPNEPWVICS--VSEDNIMQILSV 82
+ W+P P V+ S +S + + +SV
Sbjct: 412 KELHWHPQCPGVLVSTALSGFTVFRTISV 440
>UNIPROTKB|Q1JQD2 [details] [associations]
symbol:GRWD1 "Glutamate-rich WD repeat-containing protein
1" species:9913 "Bos taurus" [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 EMBL:BC116037 IPI:IPI00715008
RefSeq:NP_001069707.1 UniGene:Bt.3201 ProteinModelPortal:Q1JQD2
STRING:Q1JQD2 Ensembl:ENSBTAT00000000088 GeneID:540739
KEGG:bta:540739 CTD:83743 GeneTree:ENSGT00550000075124
HOGENOM:HOG000036730 HOVERGEN:HBG051847 InParanoid:Q1JQD2 KO:K14848
OMA:NRLMMLR OrthoDB:EOG4CG084 NextBio:20878807 Uniprot:Q1JQD2
Length = 446
Score = 123 (48.4 bits), Expect = 0.00012, P = 0.00012
Identities = 27/89 (30%), Positives = 48/89 (53%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLS-----KIGEEQSTEDAEDGPPELLFIHGGHTAKI 55
V+W P + + A+SG D ++ WDL+ + G+ ++ D P +LLF+H G T +
Sbjct: 359 VEWHPQDSGVFAASGADNQITQWDLAVERDPEAGDAETDPGLADLPQQLLFVHQGET-DL 417
Query: 56 SDFSWNPNEPWVICS--VSEDNIMQILSV 82
+ W+P P V+ S +S + + +SV
Sbjct: 418 KELHWHPQCPGVLVSTALSGFTVFRTISV 446
>UNIPROTKB|Q7PS24 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7165 "Anopheles gambiae"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT OrthoDB:EOG45DV4X
EMBL:AAAB01008846 RefSeq:XP_310648.3 HSSP:P63005
ProteinModelPortal:Q7PS24 STRING:Q7PS24
EnsemblMetazoa:AGAP000444-RA GeneID:1271794
KEGG:aga:AgaP_AGAP000444 VectorBase:AGAP000444 CTD:1271794
PhylomeDB:Q7PS24 Uniprot:Q7PS24
Length = 341
Score = 84 (34.6 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 19/67 (28%), Positives = 34/67 (50%)
Query: 259 VIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYGLSWNPSLNGYLLSASD 318
++AT V +F + +P E + + H ++ ++W+P++ G LL+ASD
Sbjct: 271 LLATACGDDTVRIFREASDSDRNEPTFELV--VTVEAHSQDANKVAWHPTVPGLLLTASD 328
Query: 319 DHTICLW 325
D I LW
Sbjct: 329 DGEIKLW 335
Score = 80 (33.2 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 21/79 (26%), Positives = 38/79 (48%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
V WS + +LA+ D+ + +W++ D ED E + + GHT + W
Sbjct: 110 VTWS-RSGNLLATCSRDKSVWIWEI------HHAPDQED-EYECVAVLNGHTQDVKKVCW 161
Query: 61 NPNEPWVICSVSEDNIMQI 79
+P E ++ S S DN +++
Sbjct: 162 HPQED-LLASASYDNTIRM 179
>UNIPROTKB|B4MY77 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7260 "Drosophila willistoni"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 OMA:SWKCVCT OrthoDB:EOG45DV4X EMBL:CH963894
RefSeq:XP_002066080.1 ProteinModelPortal:B4MY77 STRING:B4MY77
EnsemblMetazoa:FBtr0252775 GeneID:6643305 KEGG:dwi:Dwil_GK22124
FlyBase:FBgn0224109 InParanoid:B4MY77 Uniprot:B4MY77
Length = 335
Score = 89 (36.4 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 19/67 (28%), Positives = 32/67 (47%)
Query: 259 VIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYGLSWNPSLNGYLLSASD 318
+IAT + +F + + +P E H+++ + WNP + G L+S SD
Sbjct: 266 LIATACGDDGIRIFKESSDSKRDEPTFE-QVTAEESAHEQDVNSVEWNPVMAGQLISCSD 324
Query: 319 DHTICLW 325
D TI +W
Sbjct: 325 DGTIKIW 331
Score = 74 (31.1 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 31/108 (28%), Positives = 43/108 (39%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
V W P T AS G D+ + +W LS G ST+ + GH I + W
Sbjct: 20 VAWHPKGNTF-ASCGEDKAIRIWSLS--GNSWSTKT---------ILSDGHKRTIREIRW 67
Query: 61 NPNEPWVICSVSEDNIMQILSVVCVEPFDDAVEERVINEEYKI-WKKN 107
+P + + S S D I S E +A E NE + W K+
Sbjct: 68 SPCGQY-LASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSKS 114
>UNIPROTKB|Q9BQ67 [details] [associations]
symbol:GRWD1 "Glutamate-rich WD repeat-containing protein
1" species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
CTD:83743 HOGENOM:HOG000036730 HOVERGEN:HBG051847 KO:K14848
OMA:NRLMMLR OrthoDB:EOG4CG084 EMBL:AF337808 EMBL:BC002440
EMBL:AB075822 IPI:IPI00027831 RefSeq:NP_113673.3 UniGene:Hs.400625
ProteinModelPortal:Q9BQ67 SMR:Q9BQ67 IntAct:Q9BQ67
MINT:MINT-1148872 STRING:Q9BQ67 PhosphoSite:Q9BQ67 DMDM:18202731
SWISS-2DPAGE:Q9BQ67 PaxDb:Q9BQ67 PeptideAtlas:Q9BQ67 PRIDE:Q9BQ67
DNASU:83743 Ensembl:ENST00000253237 GeneID:83743 KEGG:hsa:83743
UCSC:uc002pjd.2 GeneCards:GC19P048949 H-InvDB:HIX0080107
HGNC:HGNC:21270 HPA:HPA042643 MIM:610597 neXtProt:NX_Q9BQ67
PharmGKB:PA134897548 InParanoid:Q9BQ67 PhylomeDB:Q9BQ67
GenomeRNAi:83743 NextBio:72761 ArrayExpress:Q9BQ67 Bgee:Q9BQ67
CleanEx:HS_GRWD1 Genevestigator:Q9BQ67 GermOnline:ENSG00000105447
Uniprot:Q9BQ67
Length = 446
Score = 122 (48.0 bits), Expect = 0.00015, P = 0.00015
Identities = 27/89 (30%), Positives = 49/89 (55%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLS-----KIGEEQSTEDAEDGPPELLFIHGGHTAKI 55
V+W P + + A+SG D ++ WDL+ + G+ ++ D P +LLF+H G T ++
Sbjct: 359 VEWHPQDSGVFAASGADHQITQWDLAVERDPEAGDVEADPGLADLPQQLLFVHQGET-EL 417
Query: 56 SDFSWNPNEPWVICS--VSEDNIMQILSV 82
+ W+P P ++ S +S I + +SV
Sbjct: 418 KELHWHPQCPGLLVSTALSGFTIFRTISV 446
>TAIR|locus:2123752 [details] [associations]
symbol:AT4G32990 "AT4G32990" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 IPI:IPI00532927 RefSeq:NP_195025.5 UniGene:At.54584
ProteinModelPortal:F4JVW1 SMR:F4JVW1 EnsemblPlants:AT4G32990.1
GeneID:829436 KEGG:ath:AT4G32990 OMA:WKLASEP Uniprot:F4JVW1
Length = 328
Score = 98 (39.6 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 21/62 (33%), Positives = 34/62 (54%)
Query: 293 LRGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEL 352
LRGH+ E +SWN S L + D ++ +W+I P+E+ D + TGH+ V++
Sbjct: 88 LRGHESEVKSVSWNAS-GSLLATCGRDKSVWIWEIQ--PEEDDEFDTIAVLTGHSEDVKM 144
Query: 353 EL 354
L
Sbjct: 145 VL 146
Score = 63 (27.2 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 50 GHTAKISDFSWNPNEPWVICSVSEDNIMQI 79
GHT ++ + +WNP VI S S D ++I
Sbjct: 18 GHTDRVWNVAWNPAADGVIASCSADKTVRI 47
>DICTYBASE|DDB_G0295793 [details] [associations]
symbol:DDB_G0295793 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0295793 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:AAFI02000207 KO:K15542 RefSeq:XP_002649088.2
ProteinModelPortal:C7G084 EnsemblProtists:DDB0252613 GeneID:8629212
KEGG:ddi:DDB_G0295793 OMA:APAQYPQ ProtClustDB:CLSZ2735765
Uniprot:C7G084
Length = 657
Score = 93 (37.8 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 21/82 (25%), Positives = 40/82 (48%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
V W P ++++ S G D + +WD +K + +T +HG H + +S W
Sbjct: 257 VSWHPQ-KSLIVSGGKDNNIKIWD-AKSSQNITT------------LHG-HKSTVSKVEW 301
Query: 61 NPNEPWVICSVSEDNIMQILSV 82
N N W++ S S D ++++ +
Sbjct: 302 NQNGNWIV-SASSDQLLKVFDI 322
Score = 76 (31.8 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 17/48 (35%), Positives = 23/48 (47%)
Query: 281 PDPNGECHPDLRLRGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDIN 328
P+P E H H + + LSW+P + L S S+DHT W N
Sbjct: 368 PEPQAEIHS-----AHDADVWSLSWHP-IGHILASGSNDHTTKFWSRN 409
>RGD|1310649 [details] [associations]
symbol:Grwd1 "glutamate-rich WD repeat containing 1"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310649 GO:GO:0005737
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 CTD:83743 HOGENOM:HOG000036730
HOVERGEN:HBG051847 KO:K14848 OrthoDB:EOG4CG084 EMBL:BC083883
IPI:IPI00367307 RefSeq:NP_001012067.1 UniGene:Rn.33523
ProteinModelPortal:Q5XI13 STRING:Q5XI13 PRIDE:Q5XI13 GeneID:308592
KEGG:rno:308592 UCSC:RGD:1310649 NextBio:659230 ArrayExpress:Q5XI13
Genevestigator:Q5XI13 GermOnline:ENSRNOG00000021058 Uniprot:Q5XI13
Length = 445
Score = 121 (47.7 bits), Expect = 0.00019, P = 0.00019
Identities = 29/89 (32%), Positives = 48/89 (53%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAED-G----PPELLFIHGGHTAKI 55
V+W P + + A+SG D ++ WDL+ + +S E D G P +LLF+H G T +
Sbjct: 358 VEWHPQDSGVFAASGADNQITQWDLAVERDPESGETETDPGLAALPQQLLFVHQGET-DL 416
Query: 56 SDFSWNPNEPWVICS--VSEDNIMQILSV 82
+ W+P P V+ S +S + + +SV
Sbjct: 417 KELHWHPQCPGVLISTALSGFTVFRTISV 445
>MGI|MGI:2141989 [details] [associations]
symbol:Grwd1 "glutamate-rich WD repeat containing 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:2141989 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 EMBL:AC149053 CTD:83743
GeneTree:ENSGT00550000075124 HOGENOM:HOG000036730
HOVERGEN:HBG051847 KO:K14848 OMA:NRLMMLR EMBL:AB001539
EMBL:CH466603 EMBL:BC008121 IPI:IPI00123005 RefSeq:NP_700468.2
UniGene:Mm.274847 ProteinModelPortal:Q810D6 STRING:Q810D6
PhosphoSite:Q810D6 PaxDb:Q810D6 PRIDE:Q810D6
Ensembl:ENSMUST00000107723 Ensembl:ENSMUST00000131384 GeneID:101612
KEGG:mmu:101612 InParanoid:Q810D6 NextBio:355042 CleanEx:MM_GRWD1
Genevestigator:Q810D6 GermOnline:ENSMUSG00000053801 Uniprot:Q810D6
Length = 446
Score = 121 (47.7 bits), Expect = 0.00019, P = 0.00019
Identities = 29/89 (32%), Positives = 48/89 (53%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAED-G----PPELLFIHGGHTAKI 55
V+W P + + A+SG D ++ WDL+ + +S E D G P +LLF+H G T +
Sbjct: 359 VEWHPQDSGVFAASGADNQITQWDLAVERDPESGETETDPGLAALPQQLLFVHQGET-DL 417
Query: 56 SDFSWNPNEPWVICS--VSEDNIMQILSV 82
+ W+P P V+ S +S + + +SV
Sbjct: 418 KELHWHPQCPGVLISTALSGFTVFRTISV 446
>SGD|S000004738 [details] [associations]
symbol:RRB1 "Nuclear protein involved in early steps of
ribosome biogenesis" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0042254
"ribosome biogenesis" evidence=IEA;IMP;IPI] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000004738 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0042254 EMBL:BK006946
GO:GO:0006364 InterPro:IPR022052 Pfam:PF12265 EMBL:Z48622
GeneTree:ENSGT00550000075124 HOGENOM:HOG000036730 KO:K14848
OMA:NRLMMLR OrthoDB:EOG4XWK6B PIR:S53061 RefSeq:NP_013850.1
ProteinModelPortal:Q04225 SMR:Q04225 DIP:DIP-6263N IntAct:Q04225
MINT:MINT-1168783 STRING:Q04225 PaxDb:Q04225 PeptideAtlas:Q04225
EnsemblFungi:YMR131C GeneID:855161 KEGG:sce:YMR131C CYGD:YMR131c
NextBio:978584 Genevestigator:Q04225 GermOnline:YMR131C
Uniprot:Q04225
Length = 511
Score = 121 (47.7 bits), Expect = 0.00024, P = 0.00024
Identities = 52/202 (25%), Positives = 91/202 (45%)
Query: 129 WLPDVTRVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDYSIHRLIL 188
+LP ++R + + + + P +Y+++ + WP LT +PD E ++Y ++L
Sbjct: 97 YLPHMSRPLGPDEVL--EADPTVYEMLHNVNMPWPCLTLDVIPDTLGSERRNYP-QSILL 153
Query: 189 GTHTSD---EQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEG 245
T T ++N L++ ++ + D + + D+ D V IE E I
Sbjct: 154 TTATQSSRKKENELMVLALSNLAKTLLKDDNEGEDDEED--DEDDVDPVIENE-NIPLRD 210
Query: 246 EVNRARYMP---QNPCVI-ATKTPSSDVLVFDY---TKHPSKPD---PNGECHPDLRLRG 295
NR + P N V+ AT + + DV +++ +K S P P P ++
Sbjct: 211 TTNRLKVSPFAISNQEVLTATMSENGDVYIYNLAPQSKAFSTPGYQIPKSAKRPIHTVKN 270
Query: 296 HQK-EGYGLSWNPSLN-GYLLS 315
H EGYGL W+P + G LLS
Sbjct: 271 HGNVEGYGLDWSPLIKTGALLS 292
>UNIPROTKB|B4P7Q3 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7245 "Drosophila yakuba"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CM000158 OrthoDB:EOG45DV4X RefSeq:XP_002091367.1
ProteinModelPortal:B4P7Q3 STRING:B4P7Q3 EnsemblMetazoa:FBtr0258798
GeneID:6530451 KEGG:dya:Dyak_GE12280 FlyBase:FBgn0230036
Uniprot:B4P7Q3
Length = 335
Score = 93 (37.8 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 24/70 (34%), Positives = 34/70 (48%)
Query: 259 VIATKTPSSDVLVFDYTKHPSKPD-PNGECHPDLRLRGHQKEGYGLSWNPSLNGYLLSAS 317
+IAT + +F T SKPD P E H ++ + WNP + G L+S S
Sbjct: 266 LIATACGDDGIRIFKETSD-SKPDEPTFE-QLTAEESAHDQDVNSVQWNPVVAGQLISCS 323
Query: 318 DDHTICLWDI 327
DD TI +W +
Sbjct: 324 DDGTIKIWKV 333
Score = 66 (28.3 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 28/108 (25%), Positives = 43/108 (39%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
V W P + AS G D+ + +W L+ G ST+ + GH I + W
Sbjct: 20 VAWHPKGN-VFASCGEDKAIRIWSLT--GNTWSTKT---------ILSDGHKRTIREIQW 67
Query: 61 NPNEPWVICSVSEDNIMQILSVVCVEPFDDAVEERVINEEYKI-WKKN 107
+P + + S S D I S E +A E NE + W ++
Sbjct: 68 SPCGQY-LASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRS 114
Score = 63 (27.2 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 20/90 (22%), Positives = 43/90 (47%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
V WS + +LA+ D+ + +W+++ G+++ E + HT + W
Sbjct: 109 VSWS-RSGGLLATCSRDKSVWIWEVA--GDDEF---------ECAAVLNSHTQDVKRVVW 156
Query: 61 NPNEPWVICSVSEDNIMQILSVVCVEPFDD 90
+P + ++ S S DN +++ + EP D+
Sbjct: 157 HPTKE-ILASASYDNTIKMYAE---EPIDN 182
>WB|WBGene00021899 [details] [associations]
symbol:Y54H5A.1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0009792 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
GeneTree:ENSGT00550000075124 HOGENOM:HOG000036730 KO:K14848
OMA:NRLMMLR EMBL:FO081201 RefSeq:NP_498091.1
ProteinModelPortal:Q9N393 SMR:Q9N393 DIP:DIP-26654N
MINT:MINT-1128766 STRING:Q9N393 PaxDb:Q9N393
EnsemblMetazoa:Y54H5A.1.1 EnsemblMetazoa:Y54H5A.1.2
EnsemblMetazoa:Y54H5A.1.3 GeneID:175701 KEGG:cel:CELE_Y54H5A.1
UCSC:Y54H5A.1.1 CTD:175701 WormBase:Y54H5A.1 InParanoid:Q9N393
NextBio:889274 Uniprot:Q9N393
Length = 453
Score = 119 (46.9 bits), Expect = 0.00033, P = 0.00033
Identities = 23/84 (27%), Positives = 45/84 (53%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
V W PH T +SG D + +WD++ + Q+ + E PP+L+F+H G ++ + W
Sbjct: 373 VDWHPHETTTFMASGEDDQTTIWDIATEADGQT--NIEGVPPQLMFVHMGQN-EVKEVHW 429
Query: 61 NPNEPWVICSVSED--NIMQILSV 82
+ P + + S D N+ + +++
Sbjct: 430 HQQIPGLAINTSIDGFNVFKTINI 453
>DICTYBASE|DDB_G0275073 [details] [associations]
symbol:pwp1 "periodic tryptophan protein"
species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0006364 "rRNA processing"
evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0005730
"nucleolus" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0275073 GO:GO:0005829 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR EMBL:AAFI02000013 GO:GO:0006364 KO:K14791
OMA:ICARNED RefSeq:XP_643788.1 ProteinModelPortal:Q869X0
STRING:Q869X0 EnsemblProtists:DDB0235359 GeneID:8619833
KEGG:ddi:DDB_G0275073 InParanoid:Q869X0 ProtClustDB:CLSZ2455247
Uniprot:Q869X0
Length = 569
Score = 84 (34.6 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 24/100 (24%), Positives = 43/100 (43%)
Query: 244 EGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYG- 302
+GEV + P NP T +L +D T + P ++ QK
Sbjct: 348 KGEVESLSWNPHNPKEFIVGTDDGRLLCYDATLGTAAA-------PVWSVQASQKGSVSC 400
Query: 303 LSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTI 342
S+ P G+ + S DHT+ LW++ + + +I++K +
Sbjct: 401 FSYCPGQVGFFATGSSDHTVKLWNLETSSNKPTLIESKNL 440
Score = 81 (33.6 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 23/82 (28%), Positives = 36/82 (43%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
+ W+ H +LAS +D + VWD++ T+ + F H H K+S W
Sbjct: 269 LSWNSHQRNVLASGSSDNTVKVWDIT-------TQQCLN-----TFTH--HKDKVSCLHW 314
Query: 61 NPNEPWVICSVSEDNIMQILSV 82
N +E + S D + IL V
Sbjct: 315 NSHEKTALLIGSHDKHVSILDV 336
>UNIPROTKB|B4QFZ8 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7240 "Drosophila simulans"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CM000362 OrthoDB:EOG45DV4X RefSeq:XP_002081558.1
UniGene:Dsi.12266 ProteinModelPortal:B4QFZ8
EnsemblMetazoa:FBtr0225561 GeneID:6734549 KEGG:dsi:Dsim_GD25651
FlyBase:FBgn0196936 Uniprot:B4QFZ8
Length = 335
Score = 93 (37.8 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 24/71 (33%), Positives = 35/71 (49%)
Query: 259 VIATKTPSSDVLVFDYTKHPSKPD-PNGECHPDLRLRGHQKEGYGLSWNPSLNGYLLSAS 317
+IAT + +F T SKPD P E H ++ + WNP + G L+S S
Sbjct: 266 LIATACGDDGIRIFKETSD-SKPDEPTFE-QITAEEGAHDQDVNSVQWNPVVAGQLISCS 323
Query: 318 DDHTICLWDIN 328
DD TI +W ++
Sbjct: 324 DDGTIKIWKVS 334
Score = 65 (27.9 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 28/108 (25%), Positives = 43/108 (39%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
V W P + AS G D+ + +W L+ G ST+ + GH I + W
Sbjct: 20 VAWHPKGN-VFASCGEDKAIRIWSLT--GNTWSTKT---------ILSDGHKRTIREIRW 67
Query: 61 NPNEPWVICSVSEDNIMQILSVVCVEPFDDAVEERVINEEYKI-WKKN 107
+P + + S S D I S E +A E NE + W ++
Sbjct: 68 SPCGQY-LASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRS 114
>ASPGD|ASPL0000075365 [details] [associations]
symbol:sec13 species:162425 "Emericella nidulans"
[GO:0005643 "nuclear pore" evidence=IDA] [GO:0031081 "nuclear pore
distribution" evidence=IEA] [GO:0030433 "ER-associated protein
catabolic process" evidence=IEA] [GO:0090114 "COPII-coated vesicle
budding" evidence=IEA] [GO:0043547 "positive regulation of GTPase
activity" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0030127 "COPII vesicle coat" evidence=IEA]
[GO:0031080 "nuclear pore outer ring" evidence=IEA] [GO:0035859
"Seh1-associated complex" evidence=IEA] [GO:0005198 "structural
molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0012507 GO:GO:0016192
Gene3D:2.130.10.10 PROSITE:PS00678 GO:GO:0005789 GO:GO:0015031
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005643
EMBL:BN001303 GO:GO:0051028 EMBL:AACD01000075 HOGENOM:HOG000216895
KO:K14004 OMA:IKLWKEE RefSeq:XP_661921.1 ProteinModelPortal:Q5B563
SMR:Q5B563 STRING:Q5B563 EnsemblFungi:CADANIAT00006147
GeneID:2872114 KEGG:ani:AN4317.2 OrthoDB:EOG4QNR53 Uniprot:Q5B563
Length = 309
Score = 87 (35.7 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 25/82 (30%), Positives = 40/82 (48%)
Query: 1 VQWS-PHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFS 59
V+W+ P TILASS D ++ +W + + ST G +F HTA ++ S
Sbjct: 63 VEWAHPKFGTILASSSYDGKVLIW---REQHQSSTAPIGSGAWTKVFDFSLHTASVNMIS 119
Query: 60 WNPNEPW-VICSVSEDNIMQIL 80
W P+E ++ S D + +L
Sbjct: 120 WAPHETGCLLACASSDGHVSVL 141
Score = 70 (29.7 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 14/40 (35%), Positives = 23/40 (57%)
Query: 293 LRGHQKEGYGLSWNPSL--NGYLLSASDDHTICLWDINAT 330
L GH ++W+PS+ Y+ SAS D T+ +W +A+
Sbjct: 214 LEGHSDWVRDVAWSPSILSKSYIASASQDKTVRVWTADAS 253
>UNIPROTKB|B4E039 [details] [associations]
symbol:DCAF7 "DDB1- and CUL4-associated factor 7"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AC113554
UniGene:Hs.410596 HGNC:HGNC:30915 EMBL:AK303212 IPI:IPI00908632
SMR:B4E039 STRING:B4E039 Ensembl:ENST00000415273 UCSC:uc010wpn.2
HOGENOM:HOG000200527 Uniprot:B4E039
Length = 142
Score = 94 (38.1 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 16/46 (34%), Positives = 26/46 (56%)
Query: 287 CHPDLRLRGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDINATPK 332
C P RL H+ G++W P + ++ +A+DDH +WDI P+
Sbjct: 56 CTPVARLNNHRACVNGIAWAPHSSCHICTAADDHQALIWDIQQMPR 101
Score = 41 (19.5 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 185 RLILGTHTSDEQNHLLIASVQLP 207
RL LG+ + N ++I V++P
Sbjct: 33 RLALGSFVEEYNNKVVILDVRVP 55
>UNIPROTKB|B3NQR5 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7220 "Drosophila erecta"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH954179 OrthoDB:EOG45DV4X RefSeq:XP_001975575.1
ProteinModelPortal:B3NQR5 EnsemblMetazoa:FBtr0142445 GeneID:6549053
KEGG:der:Dere_GG22391 FlyBase:FBgn0114563 Uniprot:B3NQR5
Length = 335
Score = 92 (37.4 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 24/70 (34%), Positives = 34/70 (48%)
Query: 259 VIATKTPSSDVLVFDYTKHPSKPD-PNGECHPDLRLRGHQKEGYGLSWNPSLNGYLLSAS 317
+IAT + +F T SKPD P E H ++ + WNP + G L+S S
Sbjct: 266 LIATACGDDGIRIFKETSD-SKPDEPTFE-QLTAEEGAHDQDVNSVQWNPVVAGQLISCS 323
Query: 318 DDHTICLWDI 327
DD TI +W +
Sbjct: 324 DDGTIKIWKV 333
Score = 65 (27.9 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 28/108 (25%), Positives = 43/108 (39%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
V W P + AS G D+ + +W L+ G ST+ + GH I + W
Sbjct: 20 VAWHPKGN-VFASCGEDKAIRIWSLT--GSTWSTKT---------ILSDGHKRTIREIRW 67
Query: 61 NPNEPWVICSVSEDNIMQILSVVCVEPFDDAVEERVINEEYKI-WKKN 107
+P + + S S D I S E +A E NE + W ++
Sbjct: 68 SPCGQY-LASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRS 114
>UNIPROTKB|E1BYP4 [details] [associations]
symbol:PEX7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001764 "neuron migration" evidence=IEA] [GO:0001958
"endochondral ossification" evidence=IEA] [GO:0005053 "peroxisome
matrix targeting signal-2 binding" evidence=IEA] [GO:0005782
"peroxisomal matrix" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006635 "fatty acid beta-oxidation" evidence=IEA]
[GO:0008611 "ether lipid biosynthetic process" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782
GO:GO:0008611 GO:GO:0016558 KO:K13341 OMA:GHEYAVR CTD:5191
GO:GO:0005053 GeneTree:ENSGT00700000104578 EMBL:AADN02025502
EMBL:AADN02025503 IPI:IPI00583820 RefSeq:XP_419724.3
UniGene:Gga.10547 ProteinModelPortal:E1BYP4
Ensembl:ENSGALT00000022499 GeneID:421687 KEGG:gga:421687
Uniprot:E1BYP4
Length = 321
Score = 85 (35.0 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 18/46 (39%), Positives = 25/46 (54%)
Query: 294 RGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDA 339
+GH+ Y W+P + G SAS D T+ +WD+ A P VI A
Sbjct: 150 KGHEGVIYSTIWSPHIPGCFASASGDQTLRIWDVKA-PGVRLVIPA 194
Score = 71 (30.1 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSK 27
V WS +NE +L +S D L +WD++K
Sbjct: 71 VTWSENNEHVLITSSGDGSLQIWDIAK 97
>UNIPROTKB|F1RL85 [details] [associations]
symbol:GRWD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
GeneTree:ENSGT00550000075124 KO:K14848 OMA:NRLMMLR EMBL:FP102301
RefSeq:XP_003127319.1 UniGene:Ssc.24214 Ensembl:ENSSSCT00000003475
GeneID:100521273 KEGG:ssc:100521273 Uniprot:F1RL85
Length = 445
Score = 116 (45.9 bits), Expect = 0.00070, P = 0.00070
Identities = 27/89 (30%), Positives = 47/89 (52%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLS-KIGEEQSTEDAEDG----PPELLFIHGGHTAKI 55
V+W P + + A+SG D ++ WDL+ + E + + G P +LLF+H G T +
Sbjct: 358 VEWHPQDSGVFAASGADNQITQWDLAVERDPEAGDTETDPGLVGLPQQLLFVHQGET-DL 416
Query: 56 SDFSWNPNEPWVICS--VSEDNIMQILSV 82
+ W+P P V+ S +S + + +SV
Sbjct: 417 KELHWHPQCPGVLVSTALSGFTVFRTISV 445
>UNIPROTKB|B4HRQ6 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7238 "Drosophila sechellia"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH480816 OrthoDB:EOG45DV4X RefSeq:XP_002033907.1
ProteinModelPortal:B4HRQ6 EnsemblMetazoa:FBtr0203159 GeneID:6609216
KEGG:dse:Dsec_GM20174 FlyBase:FBgn0175057 Uniprot:B4HRQ6
Length = 335
Score = 93 (37.8 bits), Expect = 0.00098, Sum P(2) = 0.00098
Identities = 24/71 (33%), Positives = 35/71 (49%)
Query: 259 VIATKTPSSDVLVFDYTKHPSKPD-PNGECHPDLRLRGHQKEGYGLSWNPSLNGYLLSAS 317
+IAT + +F T SKPD P E H ++ + WNP + G L+S S
Sbjct: 266 LIATACGDDGIRIFKETSD-SKPDEPTFE-QITAEEGAHDQDVNSVQWNPVVAGQLISCS 323
Query: 318 DDHTICLWDIN 328
DD TI +W ++
Sbjct: 324 DDGTIKIWKVS 334
Score = 61 (26.5 bits), Expect = 0.00098, Sum P(2) = 0.00098
Identities = 27/108 (25%), Positives = 42/108 (38%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
V W P + AS G D+ + +W L+ G T+ + GH I + W
Sbjct: 20 VAWHPKGN-VFASCGEDKAIRIWSLT--GNTWGTKT---------ILSDGHKRTIREIRW 67
Query: 61 NPNEPWVICSVSEDNIMQILSVVCVEPFDDAVEERVINEEYKI-WKKN 107
+P + + S S D I S E +A E NE + W ++
Sbjct: 68 SPCGQY-LASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRS 114
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.134 0.424 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 384 373 0.00087 117 3 11 22 0.43 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 93
No. of states in DFA: 623 (66 KB)
Total size of DFA: 298 KB (2151 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 33.94u 0.10s 34.04t Elapsed: 00:00:02
Total cpu time: 33.97u 0.10s 34.07t Elapsed: 00:00:02
Start: Thu Aug 15 17:21:42 2013 End: Thu Aug 15 17:21:44 2013