RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy4577
(384 letters)
>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor
acetylhydrolase IB subunit alpha {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 317
Score = 52.1 bits (123), Expect = 4e-08
Identities = 34/328 (10%), Positives = 87/328 (26%), Gaps = 35/328 (10%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
V + P +++ S+ D + VWD + GHT + D S+
Sbjct: 23 VIFHP-VFSVMVSASEDATIKVWDYET--------------GDFERTLKGHTDSVQDISF 67
Query: 61 NPNEPWVICSVSEDNIMQILSVVCVEPFDDAVEERVINEEYKIWKKNTPFLYDLVMTHAL 120
+ + + ++ I + ++ + + T +
Sbjct: 68 DHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKM 127
Query: 121 EWPSLTAQWLPDVTRVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD 180
++ + + + + R
Sbjct: 128 WEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHV 187
Query: 181 YSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIK 240
+ S + + + + D + +G + +
Sbjct: 188 VECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRD---KTIKMWDVSTGMCLMTLV 244
Query: 241 INHEGEVNRARYMPQNPCVIATKTPSSD--VLVFDYTKHPSKPDPNGECHPDLRLRGHQK 298
H+ V + +++ + D + V+DY N C L H+
Sbjct: 245 -GHDNWVRGVLFHSGGKFILSC---ADDKTLRVWDY--------KNKRCM--KTLNAHEH 290
Query: 299 EGYGLSWNPSLNGYLLSASDDHTICLWD 326
L ++ + Y+++ S D T+ +W+
Sbjct: 291 FVTSLDFHKT-APYVVTGSVDQTVKVWE 317
Score = 42.4 bits (98), Expect = 5e-05
Identities = 46/316 (14%), Positives = 91/316 (28%), Gaps = 53/316 (16%)
Query: 50 GHTAKISDFSWNPNEPWVICSVSEDNIMQILSVVCVEPFDDAVEERVINEEYKIWKKNTP 109
GH + ++ ++P ++ S SED + K+W T
Sbjct: 15 GHRSPVTRVIFHPVFSVMV-SASEDATI------------------------KVWDYETG 49
Query: 110 FLYDLVMTHALEWPSLTAQWLPDVTRVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQW 169
+ H ++ + + + I + + H + +
Sbjct: 50 DFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSI 109
Query: 170 LPD----VTRPEGKDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDF 225
+P+ V+ K + + G H + PN+D AS +
Sbjct: 110 MPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRV 169
Query: 226 GGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSK----- 280
+ K E+ H V + P++ ++ S+
Sbjct: 170 WVVATKECKAELR---EHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRD 226
Query: 281 ------PDPNGECHPDLRLRGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDINATPKEN 334
G C + L GH G+ ++ ++LS +DD T+ +WD K
Sbjct: 227 KTIKMWDVSTGMCL--MTLVGHDNWVRGVLFHSG-GKFILSCADDKTLRVWDY----KNK 279
Query: 335 RVIDAKTIFTGHTAVV 350
R + H V
Sbjct: 280 RCMK---TLNAHEHFV 292
Score = 40.5 bits (93), Expect = 2e-04
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 8/58 (13%)
Query: 293 LRGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVV 350
L GH+ + ++P ++SAS+D TI +WD D + GHT V
Sbjct: 13 LSGHRSPVTRVIFHPV-FSVMVSASEDATIKVWDYETG-------DFERTLKGHTDSV 62
>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 325
Score = 51.8 bits (122), Expect = 5e-08
Identities = 36/328 (10%), Positives = 79/328 (24%), Gaps = 26/328 (7%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
+ + P I G + D D + P ++ G ++ ++ +
Sbjct: 23 LSYDPTTNAIAYPCGKSAFVRCLD-----------DGDSKVPPVVQFTGHGSSVVTTVKF 71
Query: 61 NPNEPW-VICSVSEDNIMQILSVVCVEPFDDAVEERVINEEYKIWKKNTPFLYDLVMTHA 119
+P + +CS E V+ D V ++ + D+
Sbjct: 72 SPIKGSQYLCSGDESG-----KVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISW-DF 125
Query: 120 LEWPSLTAQWLPDVTRVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGK 179
D V + + S + +
Sbjct: 126 EGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVV 185
Query: 180 DYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEI 239
Y + D+ +D+ G ++
Sbjct: 186 FYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIE 245
Query: 240 KINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKE 299
+ + AT + + V+D T +C L Q
Sbjct: 246 DDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVT--------TSKCVQKWTLDKQQLG 297
Query: 300 GYGLSWNPSLNGYLLSASDDHTICLWDI 327
+ + NG ++S S D T+ +++
Sbjct: 298 NQQVGVVATGNGRIISLSLDGTLNFYEL 325
Score = 29.5 bits (64), Expect = 0.60
Identities = 9/49 (18%), Positives = 19/49 (38%), Gaps = 2/49 (4%)
Query: 282 DPNGECHPDLRLRGHQKEG-YGLSWNPSLNG-YLLSASDDHTICLWDIN 328
D + + P ++ GH + ++P YL S + + +W
Sbjct: 47 DGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWT 95
Score = 28.7 bits (62), Expect = 1.2
Identities = 5/19 (26%), Positives = 9/19 (47%)
Query: 310 NGYLLSASDDHTICLWDIN 328
+ + D TI +WD+
Sbjct: 263 SQKFATVGADATIRVWDVT 281
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 388
Score = 49.0 bits (115), Expect = 4e-07
Identities = 41/339 (12%), Positives = 90/339 (26%), Gaps = 33/339 (9%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTED----AEDGPPELLFIHGGHTAKIS 56
V++S E + ++G ++ V+ +S D +D I
Sbjct: 68 VKFSNDGEYL--ATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIR 125
Query: 57 DFSWNPNEPWVICSVSEDNIMQILSVVCVEPFDDAVEERVINEEYKIWKKNTPFLYDLVM 116
++P+ ++ + I E+ I +
Sbjct: 126 SVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDR 185
Query: 117 THALEWPSLTAQWLPDVTRVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRP 176
T + L + + ++ + A+ +L +
Sbjct: 186 TVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDS 245
Query: 177 EGKDYSIHRL-ILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKI 235
E + + H+ + + + ++ S D N SG
Sbjct: 246 ENESGTGHKDSVYSVVFTRDGQSVVSGS-----LDRSVKLWNLQNANNKSDSKTPNSGTC 300
Query: 236 EIEIKINHEGEVNRARYMPQNPCVIATKTPSSD--VLVFDYTKHPSKPDPNGECHPDLRL 293
E+ I H+ V + ++ + S D VL +D +G L L
Sbjct: 301 EV-TYIGHKDFVLSVATTQNDEYIL---SGSKDRGVLFWDK--------KSGNPL--LML 346
Query: 294 RGHQKEGYGLSWNPSL-----NGYLLSASDDHTICLWDI 327
+GH+ ++ + S D +W
Sbjct: 347 QGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKY 385
Score = 36.3 bits (82), Expect = 0.005
Identities = 20/116 (17%), Positives = 37/116 (31%), Gaps = 9/116 (7%)
Query: 236 EIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRG 295
E E H+ V + + + + V +++ +K D +
Sbjct: 246 ENESGTGHKDSVYSVVFTRDGQS-VVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTY 304
Query: 296 HQKEGYGLSWNPSLNG-YLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVV 350
+ + LS + N Y+LS S D + WD + + GH V
Sbjct: 305 IGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKK-SGNPLLM------LQGHRNSV 353
Score = 31.3 bits (69), Expect = 0.21
Identities = 6/28 (21%), Positives = 10/28 (35%), Gaps = 1/28 (3%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKI 28
P + A+ D + +W KI
Sbjct: 362 SSLGP-EYNVFATGSGDCKARIWKYKKI 388
Score = 29.4 bits (64), Expect = 0.84
Identities = 11/46 (23%), Positives = 17/46 (36%)
Query: 305 WNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVV 350
+P Y+ + S D + +WD R+ TGH V
Sbjct: 212 VSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSV 257
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos
taurus) [TaxId: 9913]}
Length = 371
Score = 46.4 bits (108), Expect = 3e-06
Identities = 26/363 (7%), Positives = 79/363 (21%), Gaps = 49/363 (13%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
W+ + T +A + +H+++ + H +++ W
Sbjct: 13 HAWNK-DRTQIAICPNNHEVHIYEK------------SGNKWVQVHELKEHNGQVTGVDW 59
Query: 61 NPNEPWVICSVSEDNIMQILSVVCVEPFDDAVEERVINEEYKIWKKNTPFLYDLVMTHAL 120
P+ I + D + ++ V R+ + + + +
Sbjct: 60 APDSNR-IVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRV 118
Query: 121 EWPSLTAQWLPDVTRVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD 180
Q ++ + + + A + E ++
Sbjct: 119 ISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLA-AGSCDFKCRIFSAYIKEVEE 177
Query: 181 YSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFG--GFGSVSGKIEIE 238
E +S + + K+ +
Sbjct: 178 RPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVA 237
Query: 239 IKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFD-------YTKHPSKPDPNGEC---- 287
+ + ++ ++ V A + +D + P + +
Sbjct: 238 TLASETLPLLAVTFITESSLVAAGHDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTA 297
Query: 288 ------------------HPDLRLRGHQKEGYGLSWNPSLNG---YLLSASDDHTICLWD 326
H+ +S + D + +WD
Sbjct: 298 RERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWD 357
Query: 327 INA 329
+ +
Sbjct: 358 VRS 360
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 299
Score = 44.6 bits (103), Expect = 1e-05
Identities = 41/329 (12%), Positives = 81/329 (24%), Gaps = 51/329 (15%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
+ S + L S+ + ++ WD+S G H I+
Sbjct: 18 LSSSA-DGKTLFSADAEGHINSWDIST-GISNRV------------FPDVHATMITGIKT 63
Query: 61 NPNEPWVICSVSEDNIMQILSVVCVEPFDDAVEERVINEEYKIWKKNTPFLYDLVMTHAL 120
S + + K L + A+
Sbjct: 64 TSKGDLFTVSWDDHLKVV----------------PAGGSGVDSSKAVANKLSSQPLGLAV 107
Query: 121 EWPSLTAQWLPDVTRVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD 180
A I K+ + + V + V +
Sbjct: 108 SADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSG 167
Query: 181 YSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIK 240
S+ + H ++ + + A TD+ SV+ E+
Sbjct: 168 ASVSEVKTIVHPAEITSV----------AFSNNGAFLVATDQSRKVIPYSVANNFELAHT 217
Query: 241 INHEGEVNRARYMPQNPCVIATKTPSSD--VLVFDYTKHPSKPDPNGECHPDLRLRGHQK 298
+ + + +P + T S D V+V++ K HP + H
Sbjct: 218 NSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNK--------PSDHPIIIKGAHAM 269
Query: 299 EGYGLSWNPSLNGYLLSASDDHTICLWDI 327
+ ++SA D I W++
Sbjct: 270 SSVNSVIWLN-ETTIVSAGQDSNIKFWNV 297
Score = 40.7 bits (93), Expect = 2e-04
Identities = 16/58 (27%), Positives = 21/58 (36%), Gaps = 7/58 (12%)
Query: 293 LRGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVV 350
GH K LS + L SA + I WDI+ T NR H ++
Sbjct: 8 RYGHNKAITALSSSAD-GKTLFSADAEGHINSWDIS-TGISNR-----VFPDVHATMI 58
Score = 28.4 bits (61), Expect = 1.5
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 6 HNETILASSGTDRRLHVWDLS 26
NET + S+G D + W++
Sbjct: 278 LNETTIVSAGQDSNIKFWNVP 298
>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 293
Score = 44.1 bits (102), Expect = 1e-05
Identities = 37/321 (11%), Positives = 71/321 (22%), Gaps = 50/321 (15%)
Query: 6 HNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEP 65
+++ + S D + +WD + E I GHT + ++
Sbjct: 23 YDDQKIVSGLRDNTIKIWDKNT--------------LECKRILTGHTGSVLCLQYDERVI 68
Query: 66 WVICSVSEDNIMQILSVVCVEPFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSL 125
S S + + + V+ +
Sbjct: 69 ITGSSDSTVRVWDV--------------------NTGEMLNTLIHHCEAVLHLRFNNGMM 108
Query: 126 TAQWLPDVTRVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDYSIHR 185
V + L + D +I
Sbjct: 109 VTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSA------SGDRTIKV 162
Query: 186 LILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEG 245
T + + + S G + EG
Sbjct: 163 WNTSTCEFVRTLNGHKRGIACLQYRDRLVVS------GSSDNTIRLWDIECGACLRVLEG 216
Query: 246 EVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYGLSW 305
R + + I + + V+D P G L H + L +
Sbjct: 217 HEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGT-LCLRTLVEHSGRVFRLQF 275
Query: 306 NPSLNGYLLSASDDHTICLWD 326
+ ++S+S D TI +WD
Sbjct: 276 DEF---QIVSSSHDDTILIWD 293
Score = 36.4 bits (82), Expect = 0.004
Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 10/56 (17%)
Query: 295 GHQKEGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVV 350
K Y L ++ ++S D+TI +WD N + K I TGHT V
Sbjct: 13 ETSKGVYCLQYDDQ---KIVSGLRDNTIKIWDKNTL-------ECKRILTGHTGSV 58
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 337
Score = 44.4 bits (103), Expect = 1e-05
Identities = 32/329 (9%), Positives = 69/329 (20%), Gaps = 52/329 (15%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
V S + +G + VWD+S G + P I
Sbjct: 57 VTISNPTRHVY--TGGKGCVKVWDISHPGNKS---------PVSQLDCLNRDNYIRSCKL 105
Query: 61 NPNEPWVICSVSEDNIMQILSVVCVEPFDDAVEERVINEEYKIWKKNTPFLYDLVMTHAL 120
P+ +I + A
Sbjct: 106 LPDGCTLIVGGEASTLSIW---------------------DLAAPTPRIKAELTSSAPAC 144
Query: 121 EWPSLTAQWLPDVTRVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD 180
+++ + + +W + L H + G D
Sbjct: 145 YALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLD 204
Query: 181 YSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIK 240
++ L +Q+ L K +
Sbjct: 205 NTVRSWDLREGRQLQQHDFTSQIFSL---GYCPTGEWLAVGMESSNVEVLHVNKPDKYQL 261
Query: 241 INHEGEVNRARYMPQNPCVIATKTPSSD--VLVFDYTKHPSKPDPNGECHPDLRLRGHQK 298
HE V ++ ++T D + + P G +
Sbjct: 262 HLHESCVLSLKFAYCGKWFVST---GKDNLLNAWRT--------PYGAS---IFQSKESS 307
Query: 299 EGYGLSWNPSLNGYLLSASDDHTICLWDI 327
+ + Y+++ S D ++++
Sbjct: 308 SVLSCDISVD-DKYIVTGSGDKKATVYEV 335
Score = 37.9 bits (86), Expect = 0.001
Identities = 9/83 (10%), Positives = 25/83 (30%), Gaps = 17/83 (20%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
++++ S+G D L+ W ++ +
Sbjct: 271 LKFAY-CGKWFVSTGKDNLLNAWRTPY---------------GASIFQSKESSSVLSCDI 314
Query: 61 NPNEPWVICSVSEDNIMQILSVV 83
+ ++ + I + S D + V+
Sbjct: 315 SVDDKY-IVTGSGDKKATVYEVI 336
Score = 32.5 bits (72), Expect = 0.078
Identities = 6/42 (14%), Positives = 13/42 (30%), Gaps = 1/42 (2%)
Query: 287 CHPDLRLRGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDIN 328
+L H+ L + + +S D+ + W
Sbjct: 255 KPDKYQLHLHESCVLSLKFAYC-GKWFVSTGKDNLLNAWRTP 295
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon
Thermoplasma acidophilum [TaxId: 2303]}
Length = 360
Score = 44.1 bits (102), Expect = 1e-05
Identities = 30/343 (8%), Positives = 80/343 (23%), Gaps = 42/343 (12%)
Query: 1 VQWSPHNETILASSGTD-RRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFS 59
V+ + + L ++D E+ + +
Sbjct: 48 VRRGGDTKVAFIHGTREGDFLGIYDYRTGKAEKFE---------------ENLGNVFAMG 92
Query: 60 WNPNEPWVICSVSEDNIMQILSVVCVEPFDDAVEERVINEEYKIWKKNTPFLYDLVMTHA 119
+ N + + + IM + + E +I + +
Sbjct: 93 VDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGE 152
Query: 120 LEWPSLTAQWLPDVTRVINEEYKIWKKNTPFLYDLVMTHALEWPSL-TAQWLPDVTRPEG 178
+ + A + D+ + + L + S + PD
Sbjct: 153 TDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNF 212
Query: 179 KDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIE 238
+ + + N +L +A YD + +
Sbjct: 213 SFEVVSKPFVIPLIPGSPN-----PTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYR 267
Query: 239 IKINHEGEVNRARYMPQNPCVIATKTPSSD--VLVFDYTKHPSKPDPNGECHPDLRLRGH 296
+ I E + + +L +D ++
Sbjct: 268 MIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTR--------------KVTEV 313
Query: 297 QKEGYGLSWNPSLNG-YLLSASDDHTICLWDINATPKENRVID 338
+ L + + ++ DD I + + P++ R ++
Sbjct: 314 KNNLTDLRLSA--DRKTVMVRKDDGKIYTFPLE-KPEDERTVE 353
Score = 33.7 bits (75), Expect = 0.038
Identities = 24/335 (7%), Positives = 65/335 (19%), Gaps = 43/335 (12%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
+SP + ++A + + D+ + +I
Sbjct: 8 EDFSPLDGDLIAFVSRGQ-AFIQDV------------SGTYVLKV----PEPLRIRYVRR 50
Query: 61 NPNEPWVICSVSEDNIMQIL-------SVVCVEPFDDAVEERVINEEYKIWKKNTPFLYD 113
+ + E V ++ K
Sbjct: 51 GGDTKVAF-IHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEI 109
Query: 114 LVMTHALEWPSLTAQWLPDVTRVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDV 173
+ + P++ + + Y + H +
Sbjct: 110 MTVDLETGKPTVIERSREAMITDFTISDNSRF----IAYGFPLKHGETDGYVMQAIHVYD 165
Query: 174 TRPEGKDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSG 233
+ + + + + + + D D + +
Sbjct: 166 MEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPL 225
Query: 234 KIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRL 293
G N + +P++ T L Y + G+ + L
Sbjct: 226 ---------IPGSPNPTKLVPRS----MTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPL 272
Query: 294 RGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDIN 328
Y A + + +D+
Sbjct: 273 ESSILIYSVPVHGEFAA-YYQGAPEKGVLLKYDVK 306
>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 287
Score = 42.6 bits (98), Expect = 4e-05
Identities = 34/299 (11%), Positives = 71/299 (23%), Gaps = 24/299 (8%)
Query: 40 GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQI-----------LSVVCVEPF 88
G E+L GH I+ + NP + S S D + +V ++
Sbjct: 1 GHDEVLKTISGHNKGITALTVNP-----LISGSYDGRIMEWSSSSMHQDHSNLIVSLDNS 55
Query: 89 DDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRVINEEYKIWKKNT 148
+ ++ T + A L + ++ +
Sbjct: 56 KAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIK 115
Query: 149 PFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDYSIHRLILGTHTSDEQNHLLIASVQLPN 208
+ + + A L + + S + L A +
Sbjct: 116 SVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLK------TPLRAKPSYIS 169
Query: 209 EDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSD 268
G + S +++ ++N + P +
Sbjct: 170 ISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDL 229
Query: 269 VLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDI 327
V + L H+ L W L+S+ D I W++
Sbjct: 230 VATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWET--PSTLVSSGADACIKRWNV 286
Score = 39.9 bits (91), Expect = 3e-04
Identities = 14/66 (21%), Positives = 23/66 (34%), Gaps = 17/66 (25%)
Query: 285 GECHPDLRLRGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFT 344
G + GH K L+ NP L+S S D I W + ++
Sbjct: 1 GHDEVLKTISGHNKGITALTVNP-----LISGSYDGRIMEWSSS------------SMHQ 43
Query: 345 GHTAVV 350
H+ ++
Sbjct: 44 DHSNLI 49
Score = 35.7 bits (80), Expect = 0.007
Identities = 10/81 (12%), Positives = 28/81 (34%), Gaps = 15/81 (18%)
Query: 3 WSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNP 62
E ++A+ D + ++ + + P +++ H +++ W
Sbjct: 222 EEEIEEDLVATGSLDTNIFIYSVKR-------------PMKIIKALNAHKDGVNNLLWET 268
Query: 63 NEPWVICSVSEDNIMQILSVV 83
+ S D ++ +VV
Sbjct: 269 PS--TLVSSGADACIKRWNVV 287
Score = 26.8 bits (57), Expect = 4.3
Identities = 7/24 (29%), Positives = 11/24 (45%), Gaps = 2/24 (8%)
Query: 1 VQWSPHNETILASSGTDRRLHVWD 24
+ W + L SSG D + W+
Sbjct: 264 LLWETPS--TLVSSGADACIKRWN 285
Score = 25.7 bits (54), Expect = 9.9
Identities = 7/64 (10%), Positives = 16/64 (25%), Gaps = 6/64 (9%)
Query: 287 CHPDLRLRGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGH 346
+ + G + + + S D I ++ + K + H
Sbjct: 204 RTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIK------ALNAH 257
Query: 347 TAVV 350
V
Sbjct: 258 KDGV 261
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G
protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}
Length = 340
Score = 42.0 bits (97), Expect = 6e-05
Identities = 15/79 (18%), Positives = 29/79 (36%), Gaps = 16/79 (20%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
V +S + +L + D +VWD K + + GH ++S
Sbjct: 276 VSFSK-SGRLLLAGYDDFNCNVWDALK--------------ADRAGVLAGHDNRVSCLGV 320
Query: 61 NPNEPWVICSVSEDNIMQI 79
+ V + S D+ ++I
Sbjct: 321 TDDGMAVA-TGSWDSFLKI 338
Score = 40.5 bits (93), Expect = 2e-04
Identities = 34/290 (11%), Positives = 61/290 (21%), Gaps = 15/290 (5%)
Query: 50 GHTAKISDFSWNPNEPWVICSVSEDNIMQILS------VVCVEPFDDAVEERVINEEYKI 103
GH AKI W + + S S+D + I V + V
Sbjct: 53 GHLAKIYAMHWGTDSRL-LVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNY 111
Query: 104 WKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRVINEEYKIWKKNTPFLYDLVMTHALEWP 163
+ ++ + N T AL
Sbjct: 112 VACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDI 171
Query: 164 SLTAQWLPDVTRPEGKDYSIHRLILGTHTSDEQNHLL-IASVQLPNEDAQFDASNYD--- 219
Q S + + V+ F D
Sbjct: 172 ETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINA 231
Query: 220 ---TDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 276
G+ GS + + + + + + S +L+ Y
Sbjct: 232 ICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDD 291
Query: 277 HPSKPDPNGECHPDLRLRGHQKEGYGLSWNPSLNGYLLSASDDHTICLWD 326
+ L GH L + + S D + +W+
Sbjct: 292 FNCNVWDALKADRAGVLAGHDNRVSCLGVTDD-GMAVATGSWDSFLKIWN 340
Score = 33.2 bits (74), Expect = 0.043
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 293 LRGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDIN 328
LRGH + Y + W + L+SAS D + +WD
Sbjct: 51 LRGHLAKIYAMHWGTD-SRLLVSASQDGKLIIWDSY 85
Score = 28.9 bits (63), Expect = 1.0
Identities = 4/24 (16%), Positives = 11/24 (45%), Gaps = 1/24 (4%)
Query: 1 VQWSPHNETILASSGTDRRLHVWD 24
+ + + +A+ D L +W+
Sbjct: 318 LGVTD-DGMAVATGSWDSFLKIWN 340
Score = 28.9 bits (63), Expect = 1.0
Identities = 11/78 (14%), Positives = 23/78 (29%), Gaps = 15/78 (19%)
Query: 2 QWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWN 61
+ + S D +WD+ + GH + I+ +
Sbjct: 190 LSLAPDTRLFVSGACDASAKLWDVRE--------------GMCRQTFTGHESDINAICFF 235
Query: 62 PNEPWVICSVSEDNIMQI 79
PN + S+D ++
Sbjct: 236 PNGNA-FATGSDDATCRL 252
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Pseudomonas putida [TaxId: 303]}
Length = 346
Score = 41.6 bits (96), Expect = 9e-05
Identities = 32/357 (8%), Positives = 81/357 (22%), Gaps = 55/357 (15%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
+P N T + ++ DL + G + F+
Sbjct: 45 AMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSV--------PGEVGRSMYSFAI 96
Query: 61 NPNEPWVICSVSEDNIMQILSVVCVEPFDDAVEERVINEEYKIWKKNTPFLYDLVMTHAL 120
+P+ V +V+ + VV + +
Sbjct: 97 SPDGKEVYATVNPTQRLNDHYVVK------------PPRLEVFSTADGLEAKPVRTFPMP 144
Query: 121 EWPSLTAQWLPDVTRVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD 180
L V + T +
Sbjct: 145 RQVYLMRAADDGSLYVAGPDIYKMDVKTGKYTVALPLR---------------NWNRKGY 189
Query: 181 YSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIK 240
+ L H S ++ ++ +D Q A+ + +GK +
Sbjct: 190 SAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATA--DLLYGYLSVDLKTGKTHTQEF 247
Query: 241 INHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEG 300
+ P++P I + + +D + ++
Sbjct: 248 ADLTELYFTGLRSPKDPNQIY--GVLNRLAKYDLK--------QRKL---IKAANLDHTY 294
Query: 301 YGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVELELIER 357
Y ++++ L + + +++ P + + G + ++ R
Sbjct: 295 YCVAFDKK-GDKLYLGGTFNDLAVFN----PDTLEKVKNIKLPGGDMSTTTPQVFIR 346
Score = 27.0 bits (58), Expect = 4.0
Identities = 4/44 (9%), Positives = 15/44 (34%), Gaps = 5/44 (11%)
Query: 302 GLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTG 345
G + + Y++ + + + + D + V + +
Sbjct: 1 GPALKAG-HEYMIVTNYPNNLHVVD----VASDTVYKSCVMPDK 39
>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 393
Score = 40.2 bits (92), Expect = 3e-04
Identities = 13/76 (17%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Query: 293 LRGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEL 352
+ H + + +S S + +S S D + +WD EN + + F + + +
Sbjct: 10 GKAHDADIFSVSACNS---FTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHV 66
Query: 353 ELIERLTKKADPVCTL 368
++++ + + A +C +
Sbjct: 67 DVLQAIERDAFELCLV 82
Score = 35.2 bits (79), Expect = 0.011
Identities = 12/82 (14%), Positives = 24/82 (29%), Gaps = 5/82 (6%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
V + S D L VWD + E + + +H H +
Sbjct: 20 VSACN---SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLH--HVDVLQAIER 74
Query: 61 NPNEPWVICSVSEDNIMQILSV 82
+ E ++ + S + +
Sbjct: 75 DAFELCLVATTSFSGDLLFYRI 96
Score = 32.9 bits (73), Expect = 0.067
Identities = 6/82 (7%), Positives = 22/82 (26%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
++ ++A++ L + +++ E + + + A S
Sbjct: 72 IERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASN 131
Query: 61 NPNEPWVICSVSEDNIMQILSV 82
+ + + I
Sbjct: 132 DRLLSHRLVATDVKGTTYIWKF 153
Score = 31.0 bits (68), Expect = 0.27
Identities = 6/46 (13%), Positives = 14/46 (30%)
Query: 296 HQKEGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKT 341
H + + + + S + + I + +VI K
Sbjct: 65 HVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKL 110
>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 342
Score = 39.1 bits (89), Expect = 6e-04
Identities = 8/79 (10%), Positives = 23/79 (29%), Gaps = 12/79 (15%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
++ P ++++L + D L V+ + L + + ++
Sbjct: 17 IKIIP-SKSLLLITSWDGSLTVYKFDIQAKNVD-----------LLQSLRYKHPLLCCNF 64
Query: 61 NPNEPWVICSVSEDNIMQI 79
N I + +
Sbjct: 65 IDNTDLQIYVGTVQGEILK 83
Score = 36.8 bits (83), Expect = 0.003
Identities = 7/58 (12%), Positives = 19/58 (32%), Gaps = 5/58 (8%)
Query: 293 LRGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVV 350
+ + + PS LL S D ++ ++ + K ++ + +
Sbjct: 7 EQAPKDYISDIKIIPS-KSLLLITSWDGSLTVYKFDIQAKNVDLL----QSLRYKHPL 59
Score = 27.9 bits (60), Expect = 2.2
Identities = 10/94 (10%), Positives = 34/94 (36%), Gaps = 12/94 (12%)
Query: 237 IEIKINHEGEVNRARYMPQNPCVIATKTPSSD--VLVFDYTKHPSKPDPNGECHPDLRLR 294
++I+ + ++ + +P ++ T S D + V+ + D + L+
Sbjct: 4 VQIEQAPKDYISDIKIIPSKSLLLIT---SWDGSLTVYKF-------DIQAKNVDLLQSL 53
Query: 295 GHQKEGYGLSWNPSLNGYLLSASDDHTICLWDIN 328
++ ++ + + + + I D+
Sbjct: 54 RYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLI 87
Score = 26.7 bits (57), Expect = 4.5
Identities = 11/78 (14%), Positives = 24/78 (30%), Gaps = 2/78 (2%)
Query: 3 WSPHNETILASSGTDRRLHVWDL-SKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWN 61
P + A S D R+ V + + S++ L ++ ++
Sbjct: 201 LLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFS 260
Query: 62 PNEPWVICSVSEDNIMQI 79
P + + D I+
Sbjct: 261 PRH-KFLYTAGSDGIISC 277
Score = 26.7 bits (57), Expect = 5.0
Identities = 37/306 (12%), Positives = 81/306 (26%), Gaps = 46/306 (15%)
Query: 43 ELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQILSVVCVEPFDDAVEERVINEEYK 102
+++ I ISD P++ + S D +
Sbjct: 2 QIVQIEQAPKDYISDIKIIPSKSL-LLITSWDGSL------------------------T 36
Query: 103 IWKKNTPFL-YDLVMTHALEWPSLTAQWLPDVTRVI------NEEYKIWKKNTPFLYDLV 155
++K + DL+ + + P L ++ + I E K+ +P L
Sbjct: 37 VYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALT 96
Query: 156 MTHALEWPSLTAQWLPDVTRPEGKDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDA 215
A ++ D D I + + + S ++ F
Sbjct: 97 NNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTM 156
Query: 216 SNYDTDKGDFGGFGSV--------SGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSS 267
+ V + + ++ +P+ A +
Sbjct: 157 DTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDG 216
Query: 268 DVLVFDYTKHP-----SKPDPNGECHPDLRLRGHQKEGYGLSWNPSLNGYLLSASDDHTI 322
V V + SK +L+ + ++P + +L +A D I
Sbjct: 217 RVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPR-HKFLYTAGSDGII 275
Query: 323 CLWDIN 328
W++
Sbjct: 276 SCWNLQ 281
Score = 26.4 bits (56), Expect = 7.5
Identities = 10/75 (13%), Positives = 28/75 (37%), Gaps = 17/75 (22%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 60
+++SP L ++G+D + W+L ++ + + +
Sbjct: 257 IEFSP-RHKFLYTAGSDGIISCWNL-------------QTRKKIKNFAKFNEDSVVKIAC 302
Query: 61 NPNEPWVICSVSEDN 75
+ N ++C + D+
Sbjct: 303 SDN---ILCLATSDD 314
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 311
Score = 39.1 bits (89), Expect = 6e-04
Identities = 21/325 (6%), Positives = 68/325 (20%), Gaps = 39/325 (12%)
Query: 3 WSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNP 62
+P + I ++ + I+ H+ + + +P
Sbjct: 25 NTPAGDKIQ--YCNGTSVYTVPVGS--------------LTDTEIYTEHSHQTTVAKTSP 68
Query: 63 NEPWVICSVSEDNIMQILSVVCVEPFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEW 122
+ + S ++I I + V +
Sbjct: 69 SGYY-CASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERF 127
Query: 123 PSLTAQWLPDVTRVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDYS 182
+ + + + + + A + + +
Sbjct: 128 GHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGE 187
Query: 183 IHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKIN 242
+ + + + + D + +
Sbjct: 188 HTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWS 247
Query: 243 HEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYG 302
+G IA+ + + +++ + + + G + E
Sbjct: 248 PDGTK------------IASASADKTIKIWNVA--------TLKVEKTIPV-GTRIEDQQ 286
Query: 303 LSWNPSLNGYLLSASDDHTICLWDI 327
L + L+S S + I +
Sbjct: 287 LGIIWT-KQALVSISANGFINFVNP 310
Score = 34.5 bits (77), Expect = 0.018
Identities = 9/78 (11%), Positives = 27/78 (34%), Gaps = 14/78 (17%)
Query: 2 QWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWN 61
+ T +AS+ D+ + +W+++ + + T + + + W
Sbjct: 244 LTWSPDGTKIASASADKTIKIWNVAT-LKVEKT----------IPVGTRIEDQQLGIIWT 292
Query: 62 PNEPWVICSVSEDNIMQI 79
+ S+S + +
Sbjct: 293 KQ---ALVSISANGFINF 307
Score = 28.3 bits (61), Expect = 1.4
Identities = 9/57 (15%), Positives = 14/57 (24%)
Query: 272 FDYTKHPSKPDPNGECHPDLRLRGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDIN 328
+ G D + SAS D TI +W++
Sbjct: 212 TIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVA 268
Score = 26.4 bits (56), Expect = 6.1
Identities = 7/36 (19%), Positives = 11/36 (30%), Gaps = 1/36 (2%)
Query: 293 LRGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDIN 328
H + +PS Y S + +WD
Sbjct: 54 YTEHSHQTTVAKTSPS-GYYCASGDVHGNVRIWDTT 88
>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 337
Score = 38.2 bits (87), Expect = 0.001
Identities = 27/358 (7%), Positives = 82/358 (22%), Gaps = 37/358 (10%)
Query: 11 LASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICS 70
+ + +L V D K P +
Sbjct: 4 ILAPARPDKLVVIDTEK-MAVDKV-----------ITIADAGPTPMVPMVAPGGRIAYAT 51
Query: 71 VSEDNIMQILSVVCVEPFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWL 130
V++ + D E + + ++ L+ ++ + ++ +
Sbjct: 52 VNKSE--------SLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPV 103
Query: 131 PDVTRVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTR-----------PEGK 179
+ W D ++
Sbjct: 104 RLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPEA 163
Query: 180 DYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEI 239
+ + + ++ + +V +E + A+ + T + D + + +
Sbjct: 164 GTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLT 223
Query: 240 KINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKE 299
GE+ + +T + F D E + ++
Sbjct: 224 MDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGAYNVLESFDL--EKNASIKRVPLPHS 281
Query: 300 GYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVELELIER 357
Y ++ + + + +D T ++ + ++ + L R
Sbjct: 282 YYSVNVSTD-GSTVWLGGALGDLAAYDA-ETLEKKGQV--DLPGNASMSLASVRLFTR 335
>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 355
Score = 38.3 bits (87), Expect = 0.001
Identities = 33/336 (9%), Positives = 77/336 (22%), Gaps = 16/336 (4%)
Query: 6 HNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEP 65
+ + + D+ + V+D + G L + HGG S
Sbjct: 21 FEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGILVSGSTDRTVRVWD 80
Query: 66 WVICSVSEDNIMQILSVVCVEPF-------------DDAVEERVINEEYKIWKKNTPFLY 112
+ +V C++ D+ + + +E + Y
Sbjct: 81 IKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDY 140
Query: 113 DLVMTHALEWPSLTAQWLPDVTRVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPD 172
LV E P + V + + ++ +
Sbjct: 141 PLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGH 200
Query: 173 VTRPEGKDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVS 232
R Y R + + D + + F +
Sbjct: 201 TDRIYSTIYDHERKRCISASMDTTIRIWDLENG-ELMYTLQGHTALVGLLRLSDKFLVSA 259
Query: 233 GKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLR 292
+ + Y N I T S ++LV + +
Sbjct: 260 AADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGSENQFNIYNLRSGKLVHAN 319
Query: 293 LRGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDIN 328
+ + + +++ + + D L ++
Sbjct: 320 ILKDADQIWSVNFKG--KTLVAAVEKDGQSFLEILD 353
Score = 34.1 bits (76), Expect = 0.022
Identities = 13/59 (22%), Positives = 22/59 (37%), Gaps = 11/59 (18%)
Query: 293 LRGHQKEGYG-LSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVV 350
LRGH L + + Y+++ +DD I ++D +GH V
Sbjct: 8 LRGHMTSVITCLQFEDN---YVITGADDKMIRVYDSINK-------KFLLQLSGHDGGV 56
>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein
7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}
Length = 342
Score = 35.6 bits (80), Expect = 0.009
Identities = 39/345 (11%), Positives = 78/345 (22%), Gaps = 61/345 (17%)
Query: 6 HNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEP 65
+ S D L VW + L GHT + N
Sbjct: 25 FCGNRIVSGSDDNTLKVWSAVT--------------GKCLRTLVGHTGGVWSSQMRDNII 70
Query: 66 WVICSVSEDNIMQILSVVCVEPFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSL 125
+ + +T + + +
Sbjct: 71 ISGSTDRTLKVWNA---------------------ETGECIHTLYGHTSTVRCMHLHEKR 109
Query: 126 TAQWLPDVTRVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDYSIHR 185
D T + + + + + D
Sbjct: 110 VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFM----------- 158
Query: 186 LILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEG 245
+ + + F G VSG ++ I++
Sbjct: 159 -------------VKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVE 205
Query: 246 EVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYGLSW 305
N + + + + ++LV K L+G K ++
Sbjct: 206 TGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTC 265
Query: 306 NPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVV 350
+++++SDD T+ LWD+ T + R + G VV
Sbjct: 266 LQFNKNFVITSSDDGTVKLWDLK-TGEFIRNLVTLE-SGGSGGVV 308
>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli
[TaxId: 562]}
Length = 333
Score = 35.2 bits (79), Expect = 0.010
Identities = 28/343 (8%), Positives = 72/343 (20%), Gaps = 20/343 (5%)
Query: 7 NETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 66
+T+ +S +++HVW+L+ G T+ ++ +P++ +
Sbjct: 3 KQTVYIASPESQQIHVWNLNHEGALTLTQ------------VVDVPGQVQPMVVSPDKRY 50
Query: 67 VICSVSEDNIMQILSVVCVEPFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLT 126
+ V + + + E + T D
Sbjct: 51 LYVGVRPEFRVLAYRI------APDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNA 104
Query: 127 AQWLPDVTRVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDYSIHRL 186
+ D H +
Sbjct: 105 GNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLV 164
Query: 187 ILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEGE 246
+ + N D G IE ++ E
Sbjct: 165 AQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPE 224
Query: 247 VNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGYGLSWN 306
+ + +G + + + G + +
Sbjct: 225 NFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVD 284
Query: 307 PSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAV 349
S + + H I +++I ++ + + G +
Sbjct: 285 HSGKYLIAAGQKSHHISVYEIV--GEQGLLHEKGRYAVGQGPM 325
Score = 27.9 bits (60), Expect = 2.0
Identities = 13/176 (7%), Positives = 35/176 (19%), Gaps = 7/176 (3%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSK---IGEEQSTEDAEDGPPELLFIHGGHTAKISD 57
+ SP + + R+ + ++ + + H G +
Sbjct: 42 MVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGS 101
Query: 58 FSWN----PNEPWVICSVSEDNIMQILSVVCVEPFDDAVEERVINEEYKIWKKNTPFLYD 113
++ + D + + D V + T
Sbjct: 102 YNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDG 161
Query: 114 LVMTHALEWPSLTAQWLPDVTRVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQW 169
++ + P E + N V ++
Sbjct: 162 HLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQ 217
>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon
Methanosarcina mazei [TaxId: 2209]}
Length = 301
Score = 29.1 bits (63), Expect = 0.81
Identities = 5/41 (12%), Positives = 13/41 (31%), Gaps = 1/41 (2%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGP 41
+ +P + + + + V D + +T P
Sbjct: 249 IAVTPDGKKVYVALSFCNTVSVIDTAT-NTITATMAVGKNP 288
Score = 27.1 bits (58), Expect = 4.0
Identities = 3/27 (11%), Positives = 9/27 (33%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSK 27
SP + ++ + + D +
Sbjct: 37 AVISPDGTKVYVANAHSNDVSIIDTAT 63
>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 355
Score = 28.6 bits (62), Expect = 1.4
Identities = 11/49 (22%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Query: 1 VQWSPHNETIL-ASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIH 48
+ S + +L A S D+ L++ D GEE + + P+++
Sbjct: 305 INVSQDEKPLLYALSTGDKTLYIHDAES-GEELRSVNQLGHGPQVITTA 352
Score = 28.2 bits (61), Expect = 1.6
Identities = 19/126 (15%), Positives = 40/126 (31%), Gaps = 13/126 (10%)
Query: 214 DASNYDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFD 273
DA + + + ++ + ++R + KT S V+V D
Sbjct: 227 DAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLD 286
Query: 274 YTKHPSKPDPNGECHPDLRLRGHQKEGYGLSWNPSLNGYLL-SASDDHTICLWDINATPK 332
GE L E ++ + L ++ D T+ + D + +
Sbjct: 287 A--------KTGER---LAKFEMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDA-ESGE 334
Query: 333 ENRVID 338
E R ++
Sbjct: 335 ELRSVN 340
>d1z3ix2 c.37.1.19 (X:92-389) Rad54-like, Rad54L {Zebra fish (Danio
rerio) [TaxId: 7955]}
Length = 298
Score = 27.8 bits (60), Expect = 2.5
Identities = 13/80 (16%), Positives = 23/80 (28%), Gaps = 4/80 (5%)
Query: 249 RARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDL--RLRGHQKEGYGLSWN 306
+A + P + P + K + P L LR HQ+E G+ +
Sbjct: 10 KALHDPFEDGALVLYEPPAISAHDLIKADKEKLPVHVVVDPVLSKVLRPHQRE--GVKFL 67
Query: 307 PSLNGYLLSASDDHTICLWD 326
+ I +
Sbjct: 68 WDCVTGRRIENSYGCIMADE 87
>d1eu1a2 c.81.1.1 (A:4-625) Dimethylsulfoxide reductase (DMSO
reductase) {Rhodobacter sphaeroides [TaxId: 1063]}
Length = 622
Score = 26.6 bits (57), Expect = 7.0
Identities = 12/36 (33%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Query: 203 SVQLP-NEDAQFDASNYDTDKGDFGGFGSVSGKIEI 237
V+ P E A F + F G+ SG IEI
Sbjct: 564 IVEFPITEGANFVRYADFREDPLFNPLGTPSGLIEI 599
>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 279
Score = 26.1 bits (56), Expect = 8.1
Identities = 6/47 (12%), Positives = 20/47 (42%), Gaps = 2/47 (4%)
Query: 282 DPNGECHPDLRLRGHQKEGYGLSWNPSLNGYLLSASDDHTICLWDIN 328
+G+ L + + + ++ +G ++ AS D+ + ++
Sbjct: 228 TQDGQLISALESKVKHAQCFDVALMD--DGSVVLASKDYRLYIYRYV 272
>d1rqga1 a.27.1.1 (A:397-606) Methionyl-tRNA synthetase (MetRS)
{Pyrococcus abyssi [TaxId: 29292]}
Length = 210
Score = 25.6 bits (55), Expect = 9.2
Identities = 13/78 (16%), Positives = 30/78 (38%), Gaps = 3/78 (3%)
Query: 304 SWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVELELIERLTKKAD 363
+ P + + + + W+ P ++V + +F T + I K +
Sbjct: 110 PFLPDASEKIWHLLNLDEVKRWEFRELPAGHKVRKPEILFKKVTDDQIIYFILNYMAKGN 169
Query: 364 P---VCTLEKAKKKKEVV 378
P L+K K+++V+
Sbjct: 170 PEGARILLDKYYKREDVI 187
>d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit
(Oryctolagus cuniculus) [TaxId: 9986]}
Length = 340
Score = 25.8 bits (56), Expect = 10.0
Identities = 9/75 (12%), Positives = 24/75 (32%), Gaps = 9/75 (12%)
Query: 1 VQWSPHNETILASSGTDRRLHVWDLSK-IGEEQSTEDAEDGPPELLFIH--------GGH 51
+ SP + + + ++HV++ + D + + + G H
Sbjct: 211 INISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDLWVGCH 270
Query: 52 TAKISDFSWNPNEPW 66
+ F ++ P
Sbjct: 271 PNGMRIFFYDAENPP 285
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.316 0.134 0.418
Gapped
Lambda K H
0.267 0.0373 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,523,925
Number of extensions: 72020
Number of successful extensions: 389
Number of sequences better than 10.0: 1
Number of HSP's gapped: 337
Number of HSP's successfully gapped: 91
Length of query: 384
Length of database: 2,407,596
Length adjustment: 87
Effective length of query: 297
Effective length of database: 1,213,086
Effective search space: 360286542
Effective search space used: 360286542
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 54 (25.5 bits)