RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy4578
(860 letters)
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G
protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}
Length = 340
Score = 99.4 bits (246), Expect = 4e-23
Identities = 32/173 (18%), Positives = 54/173 (31%), Gaps = 23/173 (13%)
Query: 629 WHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSA 688
LF S A D +WD R T H +++N + F P ATGS
Sbjct: 191 SLAPDTRLFVSGACDASAKLWDVRE---GMCRQTFTGHESDINAICFFPNGNA-FATGSD 246
Query: 689 DKTQFEVEEEEEENYDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGS 748
D T + +++ D + +SF+ L G
Sbjct: 247 DAT----------------CRLFDLRADQELMTYSHDNIICGITSVSFSKSGRL-LLAGY 289
Query: 749 ADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWD 801
D +WD H + + + + + +A+ D L +W+
Sbjct: 290 DDFNCNVWDALKADR-AGVLAGHDNRVSCLGVTD-DGMAVATGSWDSFLKIWN 340
Score = 81.3 bits (199), Expect = 4e-17
Identities = 33/152 (21%), Positives = 55/152 (36%), Gaps = 21/152 (13%)
Query: 702 NYDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVAL-WDLRN 760
D +WD R T H +++N + F P ATGS D T L +
Sbjct: 203 ACDASAKLWDVRE---GMCRQTFTGHESDINAICFFPNGNA-FATGSDDATCRLFDLRAD 258
Query: 761 LKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPE 820
+L +S ++ I V +S + +L + D +VWD K +
Sbjct: 259 QELMTYSHDNIICGITSVSFSK-SGRLLLAGYDDFNCNVWDALK--------------AD 303
Query: 821 LLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 852
+ GH ++S + V + S D+
Sbjct: 304 RAGVLAGHDNRVSCLGVTDDGMAVA-TGSWDS 334
Score = 53.2 bits (126), Expect = 6e-08
Identities = 16/104 (15%), Positives = 38/104 (36%), Gaps = 6/104 (5%)
Query: 688 ADKTQFEVEEEEEENYDQKLMIWDTRSHNVS----KPSHTVDAHTAEVNCLSFNPYSEYI 743
A++ + ++ + + D L V + T+ H A++ + + S
Sbjct: 11 AEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRL- 69
Query: 744 LATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETI 787
L + S D + +WD K+H+ + ++P +
Sbjct: 70 LVSASQDGKLIIWDSYTTN-KVHAIPLRSSWVMTCAYAPSGNYV 112
Score = 49.7 bits (117), Expect = 7e-07
Identities = 15/68 (22%), Positives = 25/68 (36%), Gaps = 5/68 (7%)
Query: 624 LIDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYIL 683
+ V++ L + DD +WD + + + H V+CL +
Sbjct: 273 ITSVSFSK-SGRLLLAGYDDFNCNVWDALK---ADRAGVLAGHDNRVSCLGVTDDGMA-V 327
Query: 684 ATGSADKT 691
ATGS D
Sbjct: 328 ATGSWDSF 335
Score = 43.6 bits (101), Expect = 6e-05
Identities = 19/222 (8%), Positives = 52/222 (23%), Gaps = 40/222 (18%)
Query: 658 KPSHTVDAHTAEVNCLSFNPYSEYILATGSADKT----QFEVEEEEEENYDQKLMIWDTR 713
+ T+ H A++ + + S L + S D + + +
Sbjct: 46 RTRRTLRGHLAKIYAMHWGTDSRL-LVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCA 104
Query: 714 -SHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHK 772
+ + + + + + L + + + ++ +
Sbjct: 105 YAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDT 164
Query: 773 DEIFQ-------------------VQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTED 813
+ + S D +WD+ +
Sbjct: 165 TCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVRE--------- 215
Query: 814 AEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 855
GH + I+ + PN + S+D +
Sbjct: 216 -----GMCRQTFTGHESDINAICFFPNGNA-FATGSDDATCR 251
Score = 33.2 bits (74), Expect = 0.14
Identities = 9/49 (18%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Query: 755 LWDLRNLKLKL-HSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDL 802
+ + ++++ + H +I+ + W + +L S+ D +L +WD
Sbjct: 37 IDPVGRIQMRTRRTLRGHLAKIYAMHWGT-DSRLLVSASQDGKLIIWDS 84
Score = 28.5 bits (62), Expect = 4.0
Identities = 9/32 (28%), Positives = 13/32 (40%), Gaps = 1/32 (3%)
Query: 827 GHTAKISDFSWNPNEPWVICSVSEDNIMQKPF 858
GH AKI W + + S S+D +
Sbjct: 53 GHLAKIYAMHWGTDSRL-LVSASQDGKLIIWD 83
>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor
acetylhydrolase IB subunit alpha {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 317
Score = 93.3 bits (230), Expect = 3e-21
Identities = 30/173 (17%), Positives = 71/173 (41%), Gaps = 13/173 (7%)
Query: 633 HESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTQ 692
+L S ++DQ + +W + + + H V C+S+ P S Y + +
Sbjct: 154 DGTLIASCSNDQTVRVWVVATK---ECKAELREHRHVVECISWAPESSYSSISEATGSET 210
Query: 693 FEVEEEEEENY----DQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGS 748
+ + D+ + +WD + T+ H V + F+ ++I + +
Sbjct: 211 KKSGKPGPFLLSGSRDKTIKMWDVST---GMCLMTLVGHDNWVRGVLFHSGGKFI-LSCA 266
Query: 749 ADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWD 801
DKT+ +WD +N + + + +H+ + + + + + D+ + VW+
Sbjct: 267 DDKTLRVWDYKNKRC-MKTLNAHEHFVTSLDFHK-TAPYVVTGSVDQTVKVWE 317
Score = 80.9 bits (198), Expect = 4e-17
Identities = 45/286 (15%), Positives = 92/286 (32%), Gaps = 58/286 (20%)
Query: 586 LNFFKQGYFKGTHHIEEVMYLENKTRAQICQLLDKLRLLIDVAWHLLHESLFGSVADDQK 645
++F G + + + L + + + + + + + S + D+
Sbjct: 65 ISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKT 124
Query: 646 LMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTQFEVEEEEEENYDQ 705
+ +W+ ++ T H V + N I A+ S D+T
Sbjct: 125 IKMWEVQTG---YCVKTFTGHREWVRMVRPNQDGTLI-ASCSNDQT-------------- 166
Query: 706 KLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEY-------------------ILAT 746
+ +W + + + H V C+S+ P S Y L +
Sbjct: 167 -VRVWVVATK---ECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLS 222
Query: 747 GSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIG 806
GS DKT+ +WD+ L + H + + V + + S D+ L VWD
Sbjct: 223 GSRDKTIKMWDVSTGMC-LMTLVGHDNWVRGVLFHS-GGKFILSCADDKTLRVWDYKN-- 278
Query: 807 EEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 852
+ H ++ ++ P+V+ + S D
Sbjct: 279 ------------KRCMKTLNAHEHFVTSLDFHKTAPYVV-TGSVDQ 311
Score = 79.0 bits (193), Expect = 2e-16
Identities = 29/133 (21%), Positives = 54/133 (40%), Gaps = 23/133 (17%)
Query: 625 IDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 684
+ S + D+ + +WD + T+ H V + F+ ++I
Sbjct: 208 SETKKSGKPGPFLLSGSRDKTIKMWDVST---GMCLMTLVGHDNWVRGVLFHSGGKFI-L 263
Query: 685 TGSADKTQFEVEEEEEENYDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYIL 744
+ + DKT L +WD ++ + T++AH V L F+ + Y +
Sbjct: 264 SCADDKT---------------LRVWDYKN---KRCMKTLNAHEHFVTSLDFHKTAPY-V 304
Query: 745 ATGSADKTVALWD 757
TGS D+TV +W+
Sbjct: 305 VTGSVDQTVKVWE 317
Score = 63.6 bits (153), Expect = 2e-11
Identities = 36/253 (14%), Positives = 83/253 (32%), Gaps = 71/253 (28%)
Query: 649 WDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTQFEVEEEEEENYDQKLM 708
W R + + H + V + F+P + + S D T +
Sbjct: 3 WIPRP----PEKYALSGHRSPVTRVIFHPVFSV-MVSASEDAT---------------IK 42
Query: 709 IWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEY-------------------------- 742
+WD + T+ HT V +SF+ +
Sbjct: 43 VWDYET---GDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHG 99
Query: 743 ---------------ILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETI 787
+ + S DKT+ +W+++ + +F H++ + V+ + + T+
Sbjct: 100 HDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGY-CVKTFTGHREWVRMVRPNQ-DGTL 157
Query: 788 LASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW---- 843
+AS D+ + VW ++ + + + + + IS+ + + +
Sbjct: 158 IASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPG 217
Query: 844 -VICSVSEDNIMQ 855
+ S S D ++
Sbjct: 218 PFLLSGSRDKTIK 230
Score = 60.9 bits (146), Expect = 2e-10
Identities = 41/269 (15%), Positives = 81/269 (30%), Gaps = 63/269 (23%)
Query: 626 DVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILAT 685
V +H S+ S ++D + +WD + T+ HT V +SF+ + + +
Sbjct: 22 RVIFHP-VFSVMVSASEDATIKVWDYET---GDFERTLKGHTDSVQDISFDHSGKLLASC 77
Query: 686 GSADKTQFEVEEEEEENYDQKLMIWDTRSHNVS-----------------------KPSH 722
+ + + E + S ++
Sbjct: 78 SADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVK 137
Query: 723 TVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQW-- 780
T H V + N I A+ S D+TV +W + + K H+ + + W
Sbjct: 138 TFTGHREWVRMVRPNQDGTLI-ASCSNDQTVRVWVVATKECK-AELREHRHVVECISWAP 195
Query: 781 -----------------SPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLF 823
S L S D+ + +WD+S L
Sbjct: 196 ESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVST--------------GMCLM 241
Query: 824 IHGGHTAKISDFSWNPNEPWVICSVSEDN 852
GH + ++ +++ S ++D
Sbjct: 242 TLVGHDNWVRGVLFHSGGKFIL-SCADDK 269
Score = 52.4 bits (124), Expect = 1e-07
Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 5/89 (5%)
Query: 603 VMYLENKTRAQICQLLDKLRLLIDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHT 662
+ + T + L+ + V +H S ADD+ L +WD ++ + T
Sbjct: 229 IKMWDVSTGMCLMTLVGHDNWVRGVLFHS-GGKFILSCADDKTLRVWDYKN---KRCMKT 284
Query: 663 VDAHTAEVNCLSFNPYSEYILATGSADKT 691
++AH V L F+ + Y + TGS D+T
Sbjct: 285 LNAHEHFVTSLDFHKTAPY-VVTGSVDQT 312
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 388
Score = 94.1 bits (232), Expect = 5e-21
Identities = 33/186 (17%), Positives = 67/186 (36%), Gaps = 18/186 (9%)
Query: 629 WHLLHESLFGSVADDQKLMIWDTRS----HNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 684
+ + D+ + +WD+ + + + + H V + F + +
Sbjct: 212 VSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQS-VV 270
Query: 685 TGSADKTQFEVEEEEEENYDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYIL 744
+GS D++ V+ +N + K S T H V ++ EYI
Sbjct: 271 SGSLDRS---VKLWNLQNANNKSDSKTPNSG---TCEVTYIGHKDFVLSVATTQNDEYI- 323
Query: 745 ATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPH-----NETILASSGTDRRLHV 799
+GS D+ V WD ++ L + H++ + V + + A+ D + +
Sbjct: 324 LSGSKDRGVLFWDKKSGNP-LLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARI 382
Query: 800 WDLSKI 805
W KI
Sbjct: 383 WKYKKI 388
Score = 65.6 bits (158), Expect = 8e-12
Identities = 37/270 (13%), Positives = 92/270 (34%), Gaps = 51/270 (18%)
Query: 627 VAWHLLHESLFGSVADDQKLMIWDTRSHNV---------------SKPSHTVDAHTAEVN 671
V + ++ + + ++ ++ ++ + + + + +
Sbjct: 68 VKFS--NDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIR 125
Query: 672 CLSFNPYSEYILATGSADKTQFEVEEEEEENYDQKLMIWDTRSHNVSKPSHTVDAHTAEV 731
+ F+P +++ ATG+ D+ + E + PS +
Sbjct: 126 SVCFSPDGKFL-ATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGD 184
Query: 732 NCL-----------------------SFNPYSEYILATGSADKTVALWDLRN------LK 762
+ + +P +A GS D+ V +WD L
Sbjct: 185 RTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLD 244
Query: 763 LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELL 822
+ S HKD ++ V ++ ++ + S DR + +W+L + ++ G E+
Sbjct: 245 SENESGTGHKDSVYSVVFTRDGQS-VVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVT 303
Query: 823 FIHGGHTAKISDFSWNPNEPWVICSVSEDN 852
+I H + + N+ +++ S S+D
Sbjct: 304 YIG--HKDFVLSVATTQNDEYIL-SGSKDR 330
Score = 64.0 bits (154), Expect = 3e-11
Identities = 29/150 (19%), Positives = 53/150 (35%), Gaps = 34/150 (22%)
Query: 626 DVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAE---------VNCLSFN 676
V + S + D+ + +W+ ++ N S T ++ T E V ++
Sbjct: 259 SVVFTR-DGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATT 317
Query: 677 PYSEYILATGSADKTQFEVEEEEEENYDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSF 736
EYI +GS D+ ++ WD +S P + H V ++
Sbjct: 318 QNDEYI-LSGSKDRG---------------VLFWDKKS---GNPLLMLQGHRNSVISVAV 358
Query: 737 NPYSEY-----ILATGSADKTVALWDLRNL 761
S + ATGS D +W + +
Sbjct: 359 ANGSSLGPEYNVFATGSGDCKARIWKYKKI 388
Score = 56.7 bits (135), Expect = 5e-09
Identities = 17/122 (13%), Positives = 40/122 (32%), Gaps = 9/122 (7%)
Query: 733 CLSFNPYSEYILATGSADKTVALWDL---RNLKLKLHSFESHKDEIFQVQWSPHNETILA 789
L + S + L++ R + ++LH H + V++S E +
Sbjct: 20 LLDLDSQSVPDALKKQTNDYYILYNPALPREIDVELHKSLDHTSVVCCVKFSNDGEYL-- 77
Query: 790 SSGTDRRLHVWDLSKIGEEQSTED----AEDGPPELLFIHGGHTAKISDFSWNPNEPWVI 845
++G ++ V+ +S D +D I ++P+ ++
Sbjct: 78 ATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLA 137
Query: 846 CS 847
Sbjct: 138 TG 139
Score = 51.0 bits (120), Expect = 4e-07
Identities = 40/256 (15%), Positives = 84/256 (32%), Gaps = 52/256 (20%)
Query: 641 ADDQKLMIWD-TRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTQFEVEEEE 699
+ ++++ + H HT+ V C+ F+ EY LATG +KT +
Sbjct: 35 QTNDYYILYNPALPREIDVELHKSLDHTSVVCCVKFSNDGEY-LATGC-NKTTQVYRVSD 92
Query: 700 EENYDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLR 759
+ + + + + + + F+P +++ ATG+ D+ + +WD+
Sbjct: 93 GSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFL-ATGAEDRLIRIWDIE 151
Query: 760 NLKLKLHSFESHK----------------------------------------DEIFQVQ 779
N K+ + + D + V
Sbjct: 152 NRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVA 211
Query: 780 WSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNP 839
SP + +A+ DR + VWD + + + GH + +
Sbjct: 212 VSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENE-------SGTGHKDSVYSVVFTR 264
Query: 840 NEPWVICSVSEDNIMQ 855
+ V+ S S D ++
Sbjct: 265 DGQSVV-SGSLDRSVK 279
>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 393
Score = 76.4 bits (186), Expect = 3e-15
Identities = 26/221 (11%), Positives = 64/221 (28%), Gaps = 46/221 (20%)
Query: 661 HTVDAHTAEVNCLSFNPYSEYILATGSADKTQFEVEEEEEENYDQKLMIWDTRSHNVSKP 720
+ AH A++ +S + S D L +WD + + P
Sbjct: 8 NAGKAHDADIFSVSACNS---FTVSCSGDGY---------------LKVWDNKLLDNENP 49
Query: 721 SHTVDA---------HTAEVNCLSFNPYSEYILATGSADKTVALWDLRN---------LK 762
+ H + + + + ++AT S + + + K
Sbjct: 50 KDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEK 109
Query: 763 LKLHSFESHKDEIFQVQWSPHNET----ILASSGTDRRLHVWDLSKIGEEQSTEDAEDGP 818
L L + K + ++W N+ L ++ ++W +E ++ P
Sbjct: 110 LDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSP 169
Query: 819 ----PELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 855
+ + + + +I + + +Q
Sbjct: 170 TLELQGTVESPMTPSQFATSVDISERG--LIATGFNNGTVQ 208
Score = 62.2 bits (149), Expect = 9e-11
Identities = 31/195 (15%), Positives = 62/195 (31%), Gaps = 12/195 (6%)
Query: 627 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATG 686
V L + ++ + I + + + + N + +S
Sbjct: 190 VDIS--ERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLA 247
Query: 687 SADKTQFEVEEEEEENYDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILAT 746
A + E + + + + S+ S AH++ V LSFN E + +
Sbjct: 248 IAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETL-CS 306
Query: 747 GSADKTVALWDLRNLKLKLHSFESHKDEI----FQVQWSPHNETILASSGTDRRLHVWDL 802
D + WD++ + + + H D+I + H ++ LA G V L
Sbjct: 307 AGWDGKLRFWDVKTKER-ITTLNMHCDDIEIEEDILAVDEHGDS-LAEPGVF---DVKFL 361
Query: 803 SKIGEEQSTEDAEDG 817
K D +
Sbjct: 362 KKGWRSGMGADLNES 376
>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 293
Score = 69.1 bits (167), Expect = 3e-13
Identities = 38/211 (18%), Positives = 76/211 (36%), Gaps = 36/211 (17%)
Query: 642 DDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTQFEVEEEEEE 701
D+ + +WD S + H A VN + F+ + S D+T
Sbjct: 113 KDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIV---SASGDRT---------- 159
Query: 702 NYDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNL 761
+ +W+T + + T++ H + CL + ++ +GS+D T+ LWD+
Sbjct: 160 -----IKVWNTSTC---EFVRTLNGHKRGIACLQYRDR---LVVSGSSDNTIRLWDIECG 208
Query: 762 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPEL 821
+ V+ + + S D ++ VWDL + ++
Sbjct: 209 ACLRV----LEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPA-----GTLC 259
Query: 822 LFIHGGHTAKISDFSWNPNEPWVICSVSEDN 852
L H+ ++ ++ I S S D+
Sbjct: 260 LRTLVEHSGRVFRLQFDEF---QIVSSSHDD 287
Score = 68.0 bits (164), Expect = 7e-13
Identities = 29/181 (16%), Positives = 63/181 (34%), Gaps = 38/181 (20%)
Query: 629 WHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSA 688
+ S + D+ + +W+T + + T++ H + CL + ++ +GS+
Sbjct: 143 VVDFDDKYIVSASGDRTIKVWNTSTC---EFVRTLNGHKRGIACLQYRDR---LVVSGSS 196
Query: 689 DKTQFEVEEEEEENYDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGS 748
D T + +WD + + + + +G+
Sbjct: 197 DNT---------------IRLWDIECGAC------LRVLEGHEELVRCIRFDNKRIVSGA 235
Query: 749 ADKTVALWDLRNLK--------LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVW 800
D + +WDL L L + H +F++Q+ + SS D + +W
Sbjct: 236 YDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEF---QIVSSSHDDTILIW 292
Query: 801 D 801
D
Sbjct: 293 D 293
Score = 58.7 bits (140), Expect = 7e-10
Identities = 20/137 (14%), Positives = 43/137 (31%), Gaps = 30/137 (21%)
Query: 627 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATG 686
+A + L S + D + +WD + + + + +G
Sbjct: 181 IACLQYRDRLVVSGSSDNTIRLWDIECGAC------LRVLEGHEELVRCIRFDNKRIVSG 234
Query: 687 SADKTQFEVEEEEEENYDQKLMIWDTRSHNV------SKPSHTVDAHTAEVNCLSFNPYS 740
+ D + +WD + + T+ H+ V L F+ +
Sbjct: 235 AYDGK---------------IKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEF- 278
Query: 741 EYILATGSADKTVALWD 757
+ + S D T+ +WD
Sbjct: 279 --QIVSSSHDDTILIWD 293
Score = 54.9 bits (130), Expect = 1e-08
Identities = 13/69 (18%), Positives = 27/69 (39%), Gaps = 5/69 (7%)
Query: 715 HNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDE 774
H++ + H + V CL ++ + +G D T+ +WD L+ H
Sbjct: 3 HSLQR-IHCRSETSKGVYCLQYDDQ---KIVSGLRDNTIKIWDKNTLEC-KRILTGHTGS 57
Query: 775 IFQVQWSPH 783
+ +Q+
Sbjct: 58 VLCLQYDER 66
Score = 44.1 bits (102), Expect = 4e-05
Identities = 16/86 (18%), Positives = 30/86 (34%), Gaps = 22/86 (25%)
Query: 654 HNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTQFEVEEEEEENYDQKLMIWDTR 713
H++ + H + V CL ++ + +G D T + IWD
Sbjct: 3 HSLQR-IHCRSETSKGVYCLQYDD---QKIVSGLRDNT---------------IKIWDKN 43
Query: 714 SHNVSKPSHTVDAHTAEVNCLSFNPY 739
+ + + HT V CL ++
Sbjct: 44 TL---ECKRILTGHTGSVLCLQYDER 66
Score = 38.7 bits (88), Expect = 0.002
Identities = 11/83 (13%), Positives = 26/83 (31%), Gaps = 17/83 (20%)
Query: 764 KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLF 823
++H ++ +Q+ ++ + S D + +WD + E
Sbjct: 7 RIHCRSETSKGVYCLQY---DDQKIVSGLRDNTIKIWDKNT--------------LECKR 49
Query: 824 IHGGHTAKISDFSWNPNEPWVIC 846
I GHT + ++
Sbjct: 50 ILTGHTGSVLCLQYDERVIITGS 72
>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein
7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}
Length = 342
Score = 67.9 bits (164), Expect = 1e-12
Identities = 43/227 (18%), Positives = 76/227 (33%), Gaps = 38/227 (16%)
Query: 626 DVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILAT 685
V S A D + +WD + HT+ HT V L F+ + +
Sbjct: 139 AVRCVQYDGRRVVSGAYDFMVKVWDPETE---TCLHTLQGHTNRVYSLQFDGI---HVVS 192
Query: 686 GSADKTQFEVEEEEEENYDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 745
GS D + + +WD + HT+ H + + + IL
Sbjct: 193 GSLDTS---------------IRVWDVETG---NCIHTLTGHQSLTSGMELKDN---ILV 231
Query: 746 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 805
+G+AD TV +WD++ + +K + + ++ SS D + +WDL
Sbjct: 232 SGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSD-DGTVKLWDLKT- 289
Query: 806 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 852
GE + GG + + + V S +
Sbjct: 290 GEFIRNLVTLE--------SGGSGGVVWRIRASNTKL-VCAVGSRNG 327
Score = 58.3 bits (139), Expect = 2e-09
Identities = 16/75 (21%), Positives = 25/75 (33%), Gaps = 8/75 (10%)
Query: 710 WDTRSHNVSKPSHTVDAHTAEVN-CLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSF 768
W K + H V CL F + +GS D T+ +W K L +
Sbjct: 1 WRRGEL---KSPKVLKGHDDHVITCLQFCGN---RIVSGSDDNTLKVWSAVTGKC-LRTL 53
Query: 769 ESHKDEIFQVQWSPH 783
H ++ Q +
Sbjct: 54 VGHTGGVWSSQMRDN 68
Score = 53.7 bits (127), Expect = 5e-08
Identities = 40/250 (16%), Positives = 69/250 (27%), Gaps = 42/250 (16%)
Query: 635 SLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNP----------------- 677
+ S +DD L +W + K T+ HT V
Sbjct: 28 NRIVSGSDDNTLKVWSAVTG---KCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNA 84
Query: 678 -----YSEYILATGSADKTQFEVEEEEEENYDQKLMIWDTRSHNVSKPSHTVDAHTAEVN 732
T + + + D L +WD + H + H A V
Sbjct: 85 ETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWD---IETGQCLHVLMGHVAAVR 141
Query: 733 CLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSG 792
C Y + +G+ D V +WD LH+ + H +V + + S
Sbjct: 142 C---VQYDGRRVVSGAYDFMVKVWDPETETC-LHTLQGHT---NRVYSLQFDGIHVVSGS 194
Query: 793 TDRRLHVWDLSKIGEEQSTEDAEDG-------PPELLFIHGGHTAKISDFSWNPNEPWVI 845
D + VWD+ + + L+ + T KI D +
Sbjct: 195 LDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQ 254
Query: 846 CSVSEDNIMQ 855
+ +
Sbjct: 255 GPNKHQSAVT 264
Score = 46.3 bits (108), Expect = 1e-05
Identities = 18/91 (19%), Positives = 24/91 (26%), Gaps = 25/91 (27%)
Query: 649 WDTRSHNVSKPSHTVDAHTAEVN-CLSFNPYSEYILATGSADKTQFEVEEEEEENYDQKL 707
W K + H V CL F + +GS D T L
Sbjct: 1 WRRGEL---KSPKVLKGHDDHVITCLQFCGN---RIVSGSDDNT---------------L 39
Query: 708 MIWDTRSHNVSKPSHTVDAHTAEVNCLSFNP 738
+W + K T+ HT V
Sbjct: 40 KVWSAVTG---KCLRTLVGHTGGVWSSQMRD 67
Score = 40.2 bits (92), Expect = 8e-04
Identities = 15/91 (16%), Positives = 20/91 (21%), Gaps = 17/91 (18%)
Query: 756 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAE 815
W LK + H D + + S D L VW
Sbjct: 1 WRRGELKSP-KVLKGHDDHVITC-LQF-CGNRIVSGSDDNTLKVWSAVT----------- 46
Query: 816 DGPPELLFIHGGHTAKISDFSWNPNEPWVIC 846
+ L GHT + N
Sbjct: 47 ---GKCLRTLVGHTGGVWSSQMRDNIIISGS 74
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos
taurus) [TaxId: 9913]}
Length = 371
Score = 68.0 bits (164), Expect = 1e-12
Identities = 18/133 (13%), Positives = 40/133 (30%), Gaps = 18/133 (13%)
Query: 670 VNCLSFNPYSEYILATGSADKTQFEVEEEEEENYDQKLMIWDTRSHNVSKPSHTVDAHTA 729
++C ++N +A + + I++ + H + H
Sbjct: 10 ISCHAWNKDRTQ-IAICPNNHE---------------VHIYEKSGNKW-VQVHELKEHNG 52
Query: 730 EVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILA 789
+V + + P S + T D+ +W L+ K + + NE A
Sbjct: 53 QVTGVDWAPDSNR-IVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFA 111
Query: 790 SSGTDRRLHVWDL 802
R + +
Sbjct: 112 VGSGSRVISICYF 124
Score = 49.5 bits (116), Expect = 1e-06
Identities = 27/235 (11%), Positives = 64/235 (27%), Gaps = 26/235 (11%)
Query: 626 DVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILAT 685
AW+ + ++ ++ I++ + H + H +V + + P S + T
Sbjct: 12 CHAWNK-DRTQIAICPNNHEVHIYEKSGNKW-VQVHELKEHNGQVTGVDWAPDSNR-IVT 68
Query: 686 GSADKTQFEVEEEEEENYDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 745
D+ +W + + + A ++
Sbjct: 69 CGTDRN---------------AYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFA-- 111
Query: 746 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQV--QWSPHNETILASSGTDRRLHVWDLS 803
GS + +++ K V N +LA+ D + ++
Sbjct: 112 VGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAY 171
Query: 804 KIGEEQSTEDAEDGP----PELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIM 854
E+ G EL+F + ++ N V + +
Sbjct: 172 IKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVC 226
Score = 46.4 bits (108), Expect = 9e-06
Identities = 21/141 (14%), Positives = 44/141 (31%), Gaps = 29/141 (20%)
Query: 629 WHLLHESLFGSVADDQ-KLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGS 687
+ SL + D L +D+ + +S + + +
Sbjct: 250 TFITESSLVAAGHDCFPVLFTYDSAAGKLSFGGRL-------------DVPKQSSQRGLT 296
Query: 688 ADKTQFEVEEEEEENYDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEY---IL 744
A + +N D+K + + S H V+ +S +
Sbjct: 297 ARERF--------QNLDKKASSEGSAAAGAGLDS----LHKNSVSQISVLSGGKAKCSQF 344
Query: 745 ATGSADKTVALWDLRNLKLKL 765
T D +++WD+R+L+ L
Sbjct: 345 CTTGMDGGMSIWDVRSLESAL 365
Score = 46.0 bits (107), Expect = 1e-05
Identities = 24/209 (11%), Positives = 55/209 (26%), Gaps = 29/209 (13%)
Query: 598 HHIEEVMYLENKTRAQICQLLDKLRLLIDVAWHLLHESLFGSVADDQKLMIWDTRSHNVS 657
+ ++ + + S V+ D + + D
Sbjct: 177 ERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAV 236
Query: 658 KPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTQFEVEEEEEENYDQKLMIWDTRSHNV 717
+ T + ++F S ++A G L +D+ + +
Sbjct: 237 ATLAS---ETLPLLAVTFITESS-LVAAGHDCFP--------------VLFTYDSAAGKL 278
Query: 718 SKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQ 777
S + L+ + DK + L S HK+ + Q
Sbjct: 279 SFGGRLDVPKQSSQRGLT------ARERFQNLDKKASSEGSAAAGAGLDSL--HKNSVSQ 330
Query: 778 VQWSP---HNETILASSGTDRRLHVWDLS 803
+ + ++G D + +WD+
Sbjct: 331 ISVLSGGKAKCSQFCTTGMDGGMSIWDVR 359
Score = 39.8 bits (91), Expect = 0.001
Identities = 31/224 (13%), Positives = 58/224 (25%), Gaps = 20/224 (8%)
Query: 629 WHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSA 688
+ L + + D K I+ V + + S
Sbjct: 148 DWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGV 207
Query: 689 DKTQFEVEEEEEENYDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGS 748
+ ++D + + D + T + ++F S ++A G
Sbjct: 208 CFSANG-SRVAWVSHDSTVCLADADKKMAVATLAS---ETLPLLAVTFITESS-LVAAGH 262
Query: 749 ADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEE 808
V L+ + KL SF D ++ R D E
Sbjct: 263 DCFPV-LFTYDSAAGKL-SFGGRLD--------VPKQSSQRGLTARERFQNLDKKASSEG 312
Query: 809 QSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 852
+ A L +H ++IS S + C+ D
Sbjct: 313 SAAAGAG-----LDSLHKNSVSQISVLSGGKAKCSQFCTTGMDG 351
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon
Thermoplasma acidophilum [TaxId: 2303]}
Length = 360
Score = 65.7 bits (158), Expect = 7e-12
Identities = 17/186 (9%), Positives = 45/186 (24%), Gaps = 23/186 (12%)
Query: 629 WHLLHESLFGSVADDQKLMIWDTRSHNVSKPS----HTVDAHTAEVNCLSFNPYSEYILA 684
++ D N S + N P S
Sbjct: 185 AFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMT-SE 243
Query: 685 TGSADKTQFEVEEEEEENYDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYIL 744
G D + +++ + ++ Y
Sbjct: 244 AGEYDLNDMYKR-----------SSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAY-Y 291
Query: 745 ATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 804
+ +D++ K+ K+ + ++ S + + D +++ + L K
Sbjct: 292 QGAPEKGVLLKYDVKTRKV-----TEVKNNLTDLRLSA-DRKTVMVRKDDGKIYTFPLEK 345
Query: 805 IGEEQS 810
+E++
Sbjct: 346 PEDERT 351
Score = 30.2 bits (66), Expect = 1.2
Identities = 6/79 (7%), Positives = 16/79 (20%), Gaps = 18/79 (22%)
Query: 774 EIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKIS 833
F +SP + ++A + + D+ + +I
Sbjct: 4 SKFAEDFSPLDGDLIAFVSRGQ-AFIQDV------------SGTYVLKV----PEPLRIR 46
Query: 834 DFSWNPNEPWVICSVSEDN 852
+
Sbjct: 47 YVRRGGDTKVAF-IHGTRE 64
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 337
Score = 65.2 bits (157), Expect = 9e-12
Identities = 10/76 (13%), Positives = 25/76 (32%), Gaps = 4/76 (5%)
Query: 727 HTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNET 786
H + V L F ++ + D + W S + S ++
Sbjct: 264 HESCVLSLKFAYCGKW-FVSTGKDNLLNAWRTPYGASIFQS--KESSSVLSCDISV-DDK 319
Query: 787 ILASSGTDRRLHVWDL 802
+ + D++ V+++
Sbjct: 320 YIVTGSGDKKATVYEV 335
Score = 58.7 bits (140), Expect = 1e-09
Identities = 20/130 (15%), Positives = 34/130 (26%), Gaps = 21/130 (16%)
Query: 629 WHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSA 688
L G H + + H + V L F ++ +
Sbjct: 227 IFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKW-FVSTGK 285
Query: 689 DKTQFEVEEEEEENYDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGS 748
D L W T S ++ V + +YI TGS
Sbjct: 286 DNL---------------LNAWRTPYGASIFQSK----ESSSVLSCDISVDDKYI-VTGS 325
Query: 749 ADKTVALWDL 758
DK ++++
Sbjct: 326 GDKKATVYEV 335
Score = 46.7 bits (109), Expect = 6e-06
Identities = 16/129 (12%), Positives = 38/129 (29%), Gaps = 21/129 (16%)
Query: 658 KPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTQFEVEEEEEENYDQKLMIWDTRSHNV 717
+ +T++ H V ++ + + + + TG + +WD
Sbjct: 43 RQINTLN-HGEVVCAVTISNPTRH-VYTGG----------------KGCVKVWDISHPGN 84
Query: 718 SKPSHTVD--AHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEI 775
P +D + P L G T+++WDL ++ + +
Sbjct: 85 KSPVSQLDCLNRDNYIRSCKLLPDGCT-LIVGGEASTLSIWDLAAPTPRIKAELTSSAPA 143
Query: 776 FQVQWSPHN 784
+
Sbjct: 144 CYALAISPD 152
Score = 46.3 bits (108), Expect = 1e-05
Identities = 16/143 (11%), Positives = 41/143 (28%), Gaps = 20/143 (13%)
Query: 710 WDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFE 769
T+++ L + P E++ + L + K +
Sbjct: 206 TVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDK---YQLH 262
Query: 770 SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHT 829
H+ + ++++ S+G D L+ W G +
Sbjct: 263 LHESCVLSLKFAY-CGKWFVSTGKDNLLNAWRTPY-GA--------------SIFQSKES 306
Query: 830 AKISDFSWNPNEPWVICSVSEDN 852
+ + + ++ + I + S D
Sbjct: 307 SSVLSCDISVDDKY-IVTGSGDK 328
Score = 46.0 bits (107), Expect = 1e-05
Identities = 15/100 (15%), Positives = 32/100 (32%), Gaps = 13/100 (13%)
Query: 748 SADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGE 807
D + R+ + ++++ +H + + V S + +G + VWD+S G
Sbjct: 29 PPDALIGPGIPRHAR-QINTL-NHGEVVCAVTISNPTRHVY--TGGKGCVKVWDISHPGN 84
Query: 808 EQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICS 847
+ P I P+ +I
Sbjct: 85 KS---------PVSQLDCLNRDNYIRSCKLLPDGCTLIVG 115
>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 355
Score = 64.5 bits (155), Expect = 2e-11
Identities = 21/98 (21%), Positives = 44/98 (44%), Gaps = 5/98 (5%)
Query: 708 MIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHS 767
R + + S H ++ ++ S+ IL +GS + +++LR+ KL +
Sbjct: 261 ADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVHAN 319
Query: 768 FESHKDEIFQVQWSPHNETILASSGTDRR--LHVWDLS 803
D+I+ V + +T++A+ D + L + D S
Sbjct: 320 ILKDADQIWSVNFKG--KTLVAAVEKDGQSFLEILDFS 355
Score = 61.1 bits (146), Expect = 2e-10
Identities = 32/145 (22%), Positives = 50/145 (34%), Gaps = 24/145 (16%)
Query: 661 HTVDAHTAEV-NCLSFNPYSEYILATGSADKTQFEVEEEEEENYDQKLMIWDTRSHNVSK 719
T+ H V CL F + TG+ DK + ++D+ + K
Sbjct: 6 TTLRGHMTSVITCLQFEDN---YVITGADDKM---------------IRVYDSINK---K 44
Query: 720 PSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQ 779
+ H V L + IL +GS D+TV +WD++ +
Sbjct: 45 FLLQLSGHDGGVWALKYAHGG--ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDI 102
Query: 780 WSPHNETILASSGTDRRLHVWDLSK 804
N + + D LHVW L K
Sbjct: 103 VEYKNIKYIVTGSRDNTLHVWKLPK 127
Score = 49.1 bits (115), Expect = 1e-06
Identities = 24/214 (11%), Positives = 53/214 (24%), Gaps = 22/214 (10%)
Query: 633 HESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTQ 692
++ + ADD+ + ++D+ + K + H V L + IL +GS D+
Sbjct: 22 EDNYVITGADDKMIRVYDSINK---KFLLQLSGHDGGVWALKYAHGG--ILVSGSTDR-- 74
Query: 693 FEVEEEEEENYDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKT 752
+ ++ + + TGS D T
Sbjct: 75 ---------------TVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNT 119
Query: 753 VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTE 812
+ +W L E H + + + G + +
Sbjct: 120 LHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSY 179
Query: 813 DAEDGPPELLFIHGGHTAKISDFSWNPNEPWVIC 846
D ++ + +
Sbjct: 180 DNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHER 213
Score = 41.0 bits (94), Expect = 4e-04
Identities = 10/87 (11%), Positives = 29/87 (33%), Gaps = 16/87 (18%)
Query: 766 HSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIH 825
F H + + ++ IL S G++ + ++++L +
Sbjct: 275 RKFSYHHTNLSAITTFYVSDNILVS-GSENQFNIYNLRSGKLVHANIL------------ 321
Query: 826 GGHTAKISDFSWNPNEPWVICSVSEDN 852
+I ++ ++ +V +D
Sbjct: 322 -KDADQIWSVNFKGK--TLVAAVEKDG 345
Score = 40.6 bits (93), Expect = 5e-04
Identities = 7/69 (10%), Positives = 25/69 (36%), Gaps = 5/69 (7%)
Query: 625 IDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 684
+ + +++ + + I++ RS + + ++ ++F + ++A
Sbjct: 285 SAITTFYVSDNIL-VSGSENQFNIYNLRSGKLVH--ANILKDADQIWSVNFKG--KTLVA 339
Query: 685 TGSADKTQF 693
D F
Sbjct: 340 AVEKDGQSF 348
Score = 37.2 bits (84), Expect = 0.007
Identities = 10/96 (10%), Positives = 23/96 (23%), Gaps = 16/96 (16%)
Query: 764 KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLF 823
+ + H + + + + D+ + V+D + L
Sbjct: 4 QRTTLRGHMTSVITC-LQF-EDNYVITGADDKMIRVYDSIN--------------KKFLL 47
Query: 824 IHGGHTAKISDFSWNPNEPWVICSVSEDNIMQKPFK 859
GH + + V S + K
Sbjct: 48 QLSGHDGGVWALKYAHGGILVSGSTDRTVRVWDIKK 83
>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 342
Score = 64.5 bits (155), Expect = 2e-11
Identities = 16/136 (11%), Positives = 36/136 (26%), Gaps = 3/136 (2%)
Query: 725 DAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRN--LKLKLHSFESHKDEIFQVQWSP 782
A ++ + P L S D ++ ++ + L +K + +
Sbjct: 8 QAPKDYISDIKIIPSKSL-LLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFID 66
Query: 783 HNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEP 842
+ + + + DL Q+ + E G I+ E
Sbjct: 67 NTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEV 126
Query: 843 WVICSVSEDNIMQKPF 858
+ + I K
Sbjct: 127 IDPRNYGDGVIAVKNL 142
Score = 56.4 bits (134), Expect = 5e-09
Identities = 11/121 (9%), Positives = 29/121 (23%), Gaps = 16/121 (13%)
Query: 664 DAHTAEVNCLSFNPYSEYILATGSADKTQFEVEEEEEENYDQKLMIWDTRSHNVSKPSHT 723
A ++ + P L S D + L ++ +
Sbjct: 8 QAPKDYISDIKIIPSKSL-LLITSWDGS---------------LTVYKFDIQAKNVDLLQ 51
Query: 724 VDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPH 783
+ + C +F ++ + G+ + DL + +
Sbjct: 52 SLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYG 111
Query: 784 N 784
+
Sbjct: 112 D 112
Score = 54.9 bits (130), Expect = 2e-08
Identities = 27/260 (10%), Positives = 65/260 (25%), Gaps = 35/260 (13%)
Query: 626 DVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILAT 685
D+ +SL + D L ++ + + + C +F ++ +
Sbjct: 16 DIKIIP-SKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYV 74
Query: 686 GSADKTQFEVEEEEEENYDQKLM------------------------------IWDTRSH 715
G+ +V+ ++
Sbjct: 75 GTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGD 134
Query: 716 NVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEI 775
V + +T N + + L G + V + L + + E +
Sbjct: 135 GVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKY 194
Query: 776 FQVQW--SPHNETILASSGTDRRLHVWDL-SKIGEEQSTEDAEDGPPELLFIHGGHTAKI 832
P + A S D R+ V + + S++ L +
Sbjct: 195 QIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPV 254
Query: 833 SDFSWNPNEPWVICSVSEDN 852
+ ++P + + D
Sbjct: 255 NSIEFSPR-HKFLYTAGSDG 273
Score = 54.5 bits (129), Expect = 2e-08
Identities = 25/183 (13%), Positives = 59/183 (32%), Gaps = 7/183 (3%)
Query: 629 WHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSA 688
+ S ++ ++ + + ++ ++ P + A S
Sbjct: 155 TMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSI 214
Query: 689 DKTQFEVEEEEEENYDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGS 748
D V E ++ + + + VN + F+P L T
Sbjct: 215 DGR---VAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSP-RHKFLYTAG 270
Query: 749 ADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEE 808
+D ++ W+L+ K K+ +F +E V+ + ++ IL + +D E
Sbjct: 271 SDGIISCWNLQTRK-KIKNFAKF-NEDSVVKIAC-SDNILCLATSDDTFKTNAAIDQTIE 327
Query: 809 QST 811
+
Sbjct: 328 LNA 330
Score = 51.8 bits (122), Expect = 2e-07
Identities = 11/88 (12%), Positives = 28/88 (31%), Gaps = 12/88 (13%)
Query: 768 FESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGG 827
++ KD I ++ P ++++L + D L V+ + L
Sbjct: 7 EQAPKDYISDIKIIP-SKSLLLITSWDGSLTVYKFDIQAKNVD-----------LLQSLR 54
Query: 828 HTAKISDFSWNPNEPWVICSVSEDNIMQ 855
+ + ++ N I + +
Sbjct: 55 YKHPLLCCNFIDNTDLQIYVGTVQGEIL 82
Score = 44.1 bits (102), Expect = 5e-05
Identities = 16/165 (9%), Positives = 48/165 (29%), Gaps = 31/165 (18%)
Query: 702 NYDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNL 761
+ ++ + + ++ ++ P + A S D VA+ +
Sbjct: 167 MNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQ 226
Query: 762 KLK--------------LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGE 807
+ + +++SP L ++G+D + W+L +
Sbjct: 227 GDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSP-RHKFLYTAGSDGIISCWNLQT-RK 284
Query: 808 EQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 852
+ + + + + N ++C + D+
Sbjct: 285 KIKN------------FAKFNEDSVVKIACSDN---ILCLATSDD 314
>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 287
Score = 61.1 bits (146), Expect = 1e-10
Identities = 17/94 (18%), Positives = 34/94 (36%), Gaps = 2/94 (2%)
Query: 708 MIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHS 767
T + + E ++ATGS D + ++ ++ + +
Sbjct: 194 REVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKA 253
Query: 768 FESHKDEIFQVQWSPHNETILASSGTDRRLHVWD 801
+HKD + + W + L SSG D + W+
Sbjct: 254 LNAHKDGVNNLLWETPS--TLVSSGADACIKRWN 285
Score = 57.7 bits (137), Expect = 1e-09
Identities = 14/67 (20%), Positives = 24/67 (35%), Gaps = 11/67 (16%)
Query: 719 KPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQV 778
+ T+ H + L+ NP L +GS D + W + + H + I +
Sbjct: 4 EVLKTISGHNKGITALTVNP-----LISGSYDGRIMEWSSSS------MHQDHSNLIVSL 52
Query: 779 QWSPHNE 785
S E
Sbjct: 53 DNSKAQE 59
Score = 48.4 bits (113), Expect = 2e-06
Identities = 16/86 (18%), Positives = 26/86 (30%), Gaps = 28/86 (32%)
Query: 658 KPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTQFEVEEEEEENYDQKLMIWDTRSHNV 717
+ T+ H + L+ NP L +GS D +M W + S
Sbjct: 4 EVLKTISGHNKGITALTVNP-----LISGSYDGR---------------IMEWSSSS--- 40
Query: 718 SKPSHTVDAHTAEVNCLSFNPYSEYI 743
H+ + L + EY
Sbjct: 41 -----MHQDHSNLIVSLDNSKAQEYS 61
Score = 44.2 bits (102), Expect = 3e-05
Identities = 11/53 (20%), Positives = 20/53 (37%), Gaps = 4/53 (7%)
Query: 639 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKT 691
+ + D + I+ + K ++AH VN L + L + AD
Sbjct: 232 TGSLDTNIFIYSVKRP--MKIIKALNAHKDGVNNLLWET--PSTLVSSGADAC 280
Score = 43.8 bits (101), Expect = 5e-05
Identities = 12/82 (14%), Positives = 22/82 (26%), Gaps = 24/82 (29%)
Query: 765 LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFI 824
L + H I + +P L S D R+ W S + +
Sbjct: 6 LKTISGHNKGITALTVNP-----LISGSYDGRIMEWSSSSMHQ----------------- 43
Query: 825 HGGHTAKISDFSWNPNEPWVIC 846
H+ I + + +
Sbjct: 44 --DHSNLIVSLDNSKAQEYSSI 63
Score = 38.0 bits (86), Expect = 0.004
Identities = 10/87 (11%), Positives = 26/87 (29%), Gaps = 15/87 (17%)
Query: 766 HSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIH 825
+ S K E ++A+ D + ++ + + P +++
Sbjct: 208 INAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKR-------------PMKIIKAL 254
Query: 826 GGHTAKISDFSWNPNEPWVICSVSEDN 852
H +++ W + S D
Sbjct: 255 NAHKDGVNNLLWETPS--TLVSSGADA 279
Score = 33.4 bits (74), Expect = 0.11
Identities = 16/176 (9%), Positives = 48/176 (27%), Gaps = 14/176 (7%)
Query: 626 DVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILAT 685
+ + L S + D ++M W + S H+ + L + EY +
Sbjct: 18 ALTVNPLI-----SGSYDGRIMEWSSSS--------MHQDHSNLIVSLDNSKAQEYSSIS 64
Query: 686 GSADKTQFEVEEEEEENYDQKLMIWDTRSHNVS-KPSHTVDAHTAEVNCLSFNPYSEYIL 744
+ + E + + + V + + + + +
Sbjct: 65 WDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGS 124
Query: 745 ATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVW 800
A + VA+ +++ + + ++ S ++ +
Sbjct: 125 AVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAG 180
Score = 27.2 bits (58), Expect = 8.9
Identities = 11/36 (30%), Positives = 15/36 (41%), Gaps = 5/36 (13%)
Query: 817 GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 852
G E+L GH I+ + NP + S S D
Sbjct: 1 GHDEVLKTISGHNKGITALTVNP-----LISGSYDG 31
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 299
Score = 60.0 bits (143), Expect = 3e-10
Identities = 13/125 (10%), Positives = 35/125 (28%), Gaps = 1/125 (0%)
Query: 722 HTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWS 781
H + LS + + L + A+ + WD+ + H I ++ +
Sbjct: 6 QVRYGHNKAITALSSSADGKT-LFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTT 64
Query: 782 PHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNE 841
+ S ++ S + ++ + P L + ++ +
Sbjct: 65 SKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAI 124
Query: 842 PWVIC 846
Sbjct: 125 YSHGK 129
Score = 51.1 bits (120), Expect = 2e-07
Identities = 18/97 (18%), Positives = 33/97 (34%), Gaps = 2/97 (2%)
Query: 708 MIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLK-LH 766
+I + ++N LATGS D +V +W++ +
Sbjct: 203 VIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPII 262
Query: 767 SFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLS 803
+H NET + S+G D + W++
Sbjct: 263 IKGAHAMSSVNSVIWL-NETTIVSAGQDSNIKFWNVP 298
Score = 48.8 bits (114), Expect = 1e-06
Identities = 15/141 (10%), Positives = 39/141 (27%), Gaps = 22/141 (15%)
Query: 661 HTVDAHTAEVNCLSFNPYSEYILATGSADKTQFEVEEEEEENYDQKLMIWDTRSHNVSKP 720
H + LS + + L + A+ + WD +
Sbjct: 6 QVRYGHNKAITALSSSADGKT-LFSADAEGH---------------INSWDIST---GIS 46
Query: 721 SHTV-DAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQ 779
+ D H + + L T S D + + + ++K +
Sbjct: 47 NRVFPDVHATMITGIKTTSK--GDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLG 104
Query: 780 WSPHNETILASSGTDRRLHVW 800
+ + +A + + + ++
Sbjct: 105 LAVSADGDIAVAACYKHIAIY 125
Score = 45.7 bits (106), Expect = 1e-05
Identities = 7/56 (12%), Positives = 20/56 (35%), Gaps = 2/56 (3%)
Query: 703 YDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDL 758
D +++W+ + + VN + + E + + D + W++
Sbjct: 244 LDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLN--ETTIVSAGQDSNIKFWNV 297
Score = 45.7 bits (106), Expect = 1e-05
Identities = 12/83 (14%), Positives = 20/83 (24%), Gaps = 14/83 (16%)
Query: 765 LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFI 824
H I + S + L S+ + ++ WD+S G
Sbjct: 5 DQVRYGHNKAITALSSSA-DGKTLFSADAEGHINSWDIST-GISNRV------------F 50
Query: 825 HGGHTAKISDFSWNPNEPWVICS 847
H I+ S
Sbjct: 51 PDVHATMITGIKTTSKGDLFTVS 73
Score = 36.9 bits (83), Expect = 0.007
Identities = 8/105 (7%), Positives = 22/105 (20%), Gaps = 2/105 (1%)
Query: 587 NFFKQGYFKGTHHIEEVMYLENKTRAQICQLLDKLRLLIDVAWHLLHESLFGSVADDQKL 646
N + N + + + D +
Sbjct: 189 NNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSV 248
Query: 647 MIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKT 691
++W+ + + VN + + E + + D
Sbjct: 249 IVWNMNKPSDHPIIIKGAHAMSSVNSVIWLN--ETTIVSAGQDSN 291
>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 325
Score = 58.8 bits (140), Expect = 1e-09
Identities = 20/102 (19%), Positives = 37/102 (36%), Gaps = 2/102 (1%)
Query: 702 NYDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNL 761
D+K+ +D +S K S+ AT AD T+ +WD+
Sbjct: 225 GSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQK-FATVGADATIRVWDVTTS 283
Query: 762 K-LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDL 802
K ++ + + + QV + S D L+ ++L
Sbjct: 284 KCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYEL 325
Score = 54.2 bits (128), Expect = 3e-08
Identities = 22/133 (16%), Positives = 40/133 (30%), Gaps = 17/133 (12%)
Query: 626 DVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILAT 685
DV + +V D+K+ +D +S K S+ AT
Sbjct: 210 DVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQK-FAT 268
Query: 686 GSADKTQFEVEEEEEENYDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 745
AD T + +WD + + T+D + +
Sbjct: 269 VGADAT---------------IRVWDVTTSKCVQ-KWTLDKQQLGNQQVGVVATGNGRII 312
Query: 746 TGSADKTVALWDL 758
+ S D T+ ++L
Sbjct: 313 SLSLDGTLNFYEL 325
Score = 53.0 bits (125), Expect = 7e-08
Identities = 24/123 (19%), Positives = 38/123 (30%), Gaps = 9/123 (7%)
Query: 727 HTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLK-LHSFESH-KDEIFQVQWSP-H 783
LS++P + I V D + K+ + F H + V++SP
Sbjct: 16 QRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIK 75
Query: 784 NETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 843
L S ++ VW + E S E ISD SW+
Sbjct: 76 GSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKS------EFQVLAGPISDISWDFEGRR 129
Query: 844 VIC 846
+
Sbjct: 130 LCV 132
Score = 46.8 bits (109), Expect = 6e-06
Identities = 14/177 (7%), Positives = 41/177 (23%), Gaps = 11/177 (6%)
Query: 627 VAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSE-YILAT 685
+++ ++ + D V ++ V + F+P L +
Sbjct: 23 LSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCS 82
Query: 686 GSADKTQFEVEEEEEENYDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILA 745
G ++ + + ++ +S++ +
Sbjct: 83 GDESGKVIVWGWTFDKESNSVEVNVK----------SEFQVLAGPISDISWDFEGRRLCV 132
Query: 746 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDL 802
G ++ + L H I + G D + +
Sbjct: 133 VGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQG 189
Score = 39.1 bits (89), Expect = 0.002
Identities = 21/152 (13%), Positives = 46/152 (30%), Gaps = 13/152 (8%)
Query: 702 NYDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNL 761
D ++ + S T + V + F+P S + T +D+ ++ +D ++
Sbjct: 179 GDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSG 238
Query: 762 KLKLHSFESHKDEIFQVQW-SPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPE 820
+ + + + + S + A+ G D + VWD+
Sbjct: 239 EFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDV------------TTSKCV 286
Query: 821 LLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 852
+ I S+S D
Sbjct: 287 QKWTLDKQQLGNQQVGVVATGNGRIISLSLDG 318
Score = 34.9 bits (78), Expect = 0.032
Identities = 11/92 (11%), Positives = 29/92 (31%), Gaps = 12/92 (13%)
Query: 770 SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHT 829
+ ++ + + P I G + D D + P ++ G +
Sbjct: 15 TQRNFTTHLSYDPTTNAIAYPCGKSAFVRCLD-----------DGDSKVPPVVQFTGHGS 63
Query: 830 AKISDFSWNPNEPW-VICSVSEDNIMQKPFKK 860
+ ++ ++P + +CS E +
Sbjct: 64 SVVTTVKFSPIKGSQYLCSGDESGKVIVWGWT 95
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 311
Score = 55.7 bits (132), Expect = 8e-09
Identities = 15/97 (15%), Positives = 34/97 (35%), Gaps = 5/97 (5%)
Query: 708 MIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKL--KL 765
D V + + + +A+ SADKT+ +W++ LK+ +
Sbjct: 217 NGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTI 276
Query: 766 HSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDL 802
+D+ + W+ L S + ++ +
Sbjct: 277 PVGTRIEDQQLGIIWTKQ---ALVSISANGFINFVNP 310
Score = 46.8 bits (109), Expect = 6e-06
Identities = 16/118 (13%), Positives = 30/118 (25%), Gaps = 16/118 (13%)
Query: 729 AEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETIL 788
L P + I +V + +L + H + + SP +
Sbjct: 18 GTAVVLGNTPAGDKIQYC--NGTSVYTVPVGSLTD-TEIYTEHSHQTTVAKTSP-SGYYC 73
Query: 789 ASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVIC 846
AS + +W D L + + D SW+ +
Sbjct: 74 ASGDVHGNVRIW------------DTTQTTHILKTTIPVFSGPVKDISWDSESKRIAA 119
Score = 42.6 bits (98), Expect = 1e-04
Identities = 13/119 (10%), Positives = 27/119 (22%), Gaps = 22/119 (18%)
Query: 668 AEVNCLSFNPYSEYILATGSADKTQFEVEEEEEENYDQKLMIWDTRSHNVSKPSHTVDAH 727
L P + I + S + H
Sbjct: 18 GTAVVLGNTPAGDKIQYCN-----------------GTSVYTVPVGS---LTDTEIYTEH 57
Query: 728 TAEVNCLSFNPYSEYILATGSADKTVALWDLR-NLKLKLHSFESHKDEIFQVQWSPHNE 785
+ + +P Y A+G V +WD + + + + W ++
Sbjct: 58 SHQTTVAKTSPSGYY-CASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESK 115
Score = 39.9 bits (91), Expect = 9e-04
Identities = 6/77 (7%), Positives = 19/77 (24%), Gaps = 4/77 (5%)
Query: 640 VADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTQFEVEEEE 699
+ + S + H+ + +P Y A+G + +
Sbjct: 34 YCNGTSVYTVPVGS---LTDTEIYTEHSHQTTVAKTSPSGYY-CASGDVHGNVRIWDTTQ 89
Query: 700 EENYDQKLMIWDTRSHN 716
+ + + +
Sbjct: 90 TTHILKTTIPVFSGPVK 106
Score = 39.5 bits (90), Expect = 0.001
Identities = 9/87 (10%), Positives = 26/87 (29%), Gaps = 14/87 (16%)
Query: 766 HSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIH 825
+ T +AS+ D+ + +W+++ + + T + +
Sbjct: 231 SLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVAT-LKVEKT----------IPVG 279
Query: 826 GGHTAKISDFSWNPNEPWVICSVSEDN 852
+ W + S+S +
Sbjct: 280 TRIEDQQLGIIWTKQ---ALVSISANG 303
Score = 38.0 bits (86), Expect = 0.004
Identities = 12/64 (18%), Positives = 22/64 (34%), Gaps = 5/64 (7%)
Query: 629 WHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTVDAHT-AEVNCLSFNPYSEYILATGS 687
+ S + D+ + IW+ + K T+ T E L + L + S
Sbjct: 245 TWSPDGTKIASASADKTIKIWNVAT---LKVEKTIPVGTRIEDQQLGIIWTKQA-LVSIS 300
Query: 688 ADKT 691
A+
Sbjct: 301 ANGF 304
Score = 33.7 bits (75), Expect = 0.084
Identities = 6/75 (8%), Positives = 19/75 (25%), Gaps = 17/75 (22%)
Query: 780 WSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNP 839
+P + I ++ + I+ H+ + + +P
Sbjct: 25 NTPAGDKIQ--YCNGTSVYTVPVGS--------------LTDTEIYTEHSHQTTVAKTSP 68
Query: 840 NEPWVICSVSEDNIM 854
+ + S +
Sbjct: 69 SGYY-CASGDVHGNV 82
>gi|206564140|ref|YP_002234903.1|(51-382:385) putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|198040180|emb|CAR56163.1| putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|194561004|ref|YP_002096029.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|124876520|gb|EAY66510.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|170737581|ref|YP_001778841.1| amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|169819769|gb|ACA94351.1| Amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|78061451|ref|YP_371359.1| amine dehydrogenase
[Burkholderia sp. 383] gi|77969336|gb|ABB10715.1|
Amine dehydrogenase [Burkholderia sp. 383]
gi|107025662|ref|YP_623173.1| amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116693156|ref|YP_838689.1| amine dehydrogenase
[Burkholderia cenocepacia HI2424]
gi|105895036|gb|ABF78200.1| Amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116651156|gb|ABK11796.1| Amine dehydrogenase
[Burkholderia cenocepacia HI2424] E=8e-14 s/c=0.25
id=29% cov=82%
Length = 321
Score = 53.8 bits (128), Expect = 4e-08
Identities = 18/201 (8%), Positives = 36/201 (17%), Gaps = 25/201 (12%)
Query: 636 LFGSVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTQFEV 695
+ + + S C+ P +
Sbjct: 88 RLYVANITPAASVTVIDAVSKKMLSEI-----DTAACVLAYPAGDDRFTALCES------ 136
Query: 696 EEEEEENYDQKLMIWDTRSHNVSK-PSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVA 754
+ L + + +K + + + V
Sbjct: 137 --------GKALTVTLDANGKEAKRTMSDAFIDVDKDPAFVNASRYKGDYLFTTYGGNVR 188
Query: 755 LWDLRNLKLK-LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTED 813
D K + D W P A R +V G + S +D
Sbjct: 189 SADFSGDKPAFGKPWSLLTDAERAEGWRPGGMQQTAVQAKQNRYYVL--MHKGTDGSHKD 246
Query: 814 AEDGPPELLFIHGGHTAKISD 834
G ++
Sbjct: 247 P--GTQVWVYDLKSKQRVARW 265
Score = 45.4 bits (106), Expect = 2e-05
Identities = 10/130 (7%), Positives = 26/130 (20%), Gaps = 7/130 (5%)
Query: 639 SVADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTQFEVEEE 698
+ D + T + P A + + + +
Sbjct: 180 FTTYGGNVRSADFSGDKPA-FGKPWSLLTDAERAEGWRPGGMQQTAVQAKQNRYYVLMHK 238
Query: 699 EEENYDQKLMIWDTRSHNVSKPSHTVDAHT----AEVNCLSFNPYSEYIL-ATGSADKTV 753
+ + SK + + + + + + V
Sbjct: 239 GTDGSHKDPGTQVWVYDLKSKQRVARWDLAQQKVEPLVSIQVSEDDKPLFYGLTATSDLV 298
Query: 754 ALWDLRNLKL 763
+ D R L
Sbjct: 299 -VMDARTGAL 307
Score = 43.4 bits (101), Expect = 7e-05
Identities = 14/203 (6%), Positives = 33/203 (16%), Gaps = 27/203 (13%)
Query: 636 LFGSVADDQKLMIWDTRSHNVSK-PSHTVDAHTAEVNCLSFNPYSEYILATGSADKTQFE 694
+ L + + +K + + +
Sbjct: 130 FTALCESGKALTVTLDANGKEAKRTMSDAFIDVDKDPAFVNASRYKGDYLFTTYGGNVRS 189
Query: 695 VEEEEEENYDQKLMIWDTRSHNVSKPS------HTVDAHTAEVNCLSFNPYSE------- 741
+ + W + +
Sbjct: 190 ADFSG--DKPAFGKPWSLLTDAERAEGWRPGGMQQTAVQAKQNRYYVLMHKGTDGSHKDP 247
Query: 742 --YILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHV 799
+ K + + + +Q S ++ + L V
Sbjct: 248 GTQVWVYDLKSKQRVARWDLAQQKV--------EPLVSIQVSEDDKPLFYGLTATSDLVV 299
Query: 800 WDLSKIGEEQSTEDAEDGPPELL 822
D G Q E LL
Sbjct: 300 MDART-GALQHVEKQIGNTSSLL 321
>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 337
Score = 52.5 bits (124), Expect = 1e-07
Identities = 23/158 (14%), Positives = 45/158 (28%), Gaps = 9/158 (5%)
Query: 702 NYDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNL 761
KL++ DT V K T+ P AT + +++ DL
Sbjct: 8 ARPDKLVVIDTEKMAVDK-VITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTG 66
Query: 762 KL----KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDG 817
+ L + E +F SP +T+ R + + D
Sbjct: 67 ETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEV----QPTRVALYDA 122
Query: 818 PPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQ 855
+I+ +W + + + ++M
Sbjct: 123 ETLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMD 160
Score = 45.6 bits (106), Expect = 2e-05
Identities = 17/142 (11%), Positives = 33/142 (23%), Gaps = 14/142 (9%)
Query: 625 IDVAWHLLHESLFGSVADDQKLMIWDTRSHNVSKPSHTV---DAHTAEVNCLSFNPYSEY 681
DV G +A D + + + D T E+ +
Sbjct: 183 PDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVF 242
Query: 682 ILATGSADKTQFEVEEEEEENYDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSE 741
+T L +D + V ++ +
Sbjct: 243 YFSTAVNPAKTRAF------GAYNVLESFDLEKN---ASIKRVP-LPHSYYSVNVSTDGS 292
Query: 742 YILATGSADKTVALWDLRNLKL 763
+ G A +A +D L+
Sbjct: 293 T-VWLGGALGDLAAYDAETLEK 313
Score = 44.8 bits (104), Expect = 3e-05
Identities = 13/115 (11%), Positives = 30/115 (26%), Gaps = 10/115 (8%)
Query: 741 EYILATGSADKTVALWDLRNLKL-KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHV 799
+ + + + D + + K+ + +P A+ L
Sbjct: 1 RDYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVK 60
Query: 800 WDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIM 854
DL GE D + + G + +P+ + S +
Sbjct: 61 IDLVT-GETLGRIDLSTPEERVKSLFG--------AALSPDGKTLAIYESPVRLE 106
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Pseudomonas putida [TaxId: 303]}
Length = 346
Score = 50.5 bits (119), Expect = 4e-07
Identities = 14/120 (11%), Positives = 33/120 (27%), Gaps = 9/120 (7%)
Query: 734 LSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGT 793
+ EY + + + + D+ + + K +P N T +
Sbjct: 2 PALKAGHEY-MIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNH 60
Query: 794 DRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 853
++ DL + G + F+ +P+ V +V+
Sbjct: 61 YGDIYGIDLDTCKNTFHANLSSV--------PGEVGRSMYSFAISPDGKEVYATVNPTQR 112
Score = 48.6 bits (114), Expect = 2e-06
Identities = 19/110 (17%), Positives = 32/110 (29%), Gaps = 7/110 (6%)
Query: 702 NYDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNL 761
NY L + D S V K S + P + + + DL
Sbjct: 15 NYPNNLHVVDVASDTVYK-SCVMP-DKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTC 72
Query: 762 KLKLH-----SFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIG 806
K H ++ SP + + A+ +RL+ + K
Sbjct: 73 KNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPP 122
>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 355
Score = 50.2 bits (118), Expect = 6e-07
Identities = 18/150 (12%), Positives = 51/150 (34%), Gaps = 13/150 (8%)
Query: 640 VADDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTQFEVEEEE 699
K+ D S + V+A T + P +A + + ++
Sbjct: 212 PTYTGKIHQIDLSSGDAK-FLPAVEALTEAERADGWRPGGWQQVA-YHRALDRIYLLVDQ 269
Query: 700 EENY-----DQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYIL-ATGSADKTV 753
+ + + +++ D ++ + + E++ ++ + + +L A + DKT+
Sbjct: 270 RDEWRHKTASRFVVVLDAKTG---ERLAKFE-MGHEIDSINVSQDEKPLLYALSTGDKTL 325
Query: 754 ALWDLRNLKLKLHSFESHKDEIFQVQWSPH 783
+ D + + L S + +
Sbjct: 326 YIHDAESGEE-LRSVNQLGHGPQVITTADM 354
Score = 45.6 bits (106), Expect = 2e-05
Identities = 23/191 (12%), Positives = 58/191 (30%), Gaps = 10/191 (5%)
Query: 641 ADDQKLMIWDTRSHNVS--KPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTQFEVEEE 698
D + +N +++ + L + +++
Sbjct: 166 RDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGR-LVWPTYTGKIHQIDLS 224
Query: 699 EEENY---DQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVAL 755
+ + + R+ A+ ++ + +A + V +
Sbjct: 225 SGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVV 284
Query: 756 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETIL-ASSGTDRRLHVWDLSKIGEEQSTEDA 814
D + + L FE + I + S + +L A S D+ L++ D GEE + +
Sbjct: 285 LDAKTGER-LAKFEMGHE-IDSINVSQDEKPLLYALSTGDKTLYIHDAES-GEELRSVNQ 341
Query: 815 EDGPPELLFIH 825
P+++
Sbjct: 342 LGHGPQVITTA 352
>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon
Methanosarcina mazei [TaxId: 2209]}
Length = 301
Score = 49.1 bits (115), Expect = 9e-07
Identities = 7/65 (10%), Positives = 21/65 (32%), Gaps = 2/65 (3%)
Query: 740 SEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHV 799
S + S +++ D+ + K+ + SP + ++ + +
Sbjct: 1 STFAYIANSESDNISVIDVTSNKV-TATIPVG-SNPMGAVISPDGTKVYVANAHSNDVSI 58
Query: 800 WDLSK 804
D +
Sbjct: 59 IDTAT 63
Score = 44.1 bits (102), Expect = 4e-05
Identities = 8/76 (10%), Positives = 21/76 (27%), Gaps = 10/76 (13%)
Query: 708 MIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHS 767
+K + + + ++ P + + S TV++ D +
Sbjct: 224 NTVSMIDTGTNKITARIPVGP-DPAGIAVTPDGKKVYVALSFCNTVSVIDTATNTIT--- 279
Query: 768 FESHKDEIFQVQWSPH 783
V +P+
Sbjct: 280 ------ATMAVGKNPY 289
Score = 43.3 bits (100), Expect = 7e-05
Identities = 10/106 (9%), Positives = 24/106 (22%), Gaps = 19/106 (17%)
Query: 679 SEYILATGSADKTQFEVEEEEEENYDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNP 738
S + S + + D S+ V+ T+ + +P
Sbjct: 1 STFAYIANSESDN---------------ISVIDVTSNKVTA---TIPVG-SNPMGAVISP 41
Query: 739 YSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHN 784
+ + V++ D + + V
Sbjct: 42 DGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAVSPDGKQ 87
Score = 34.5 bits (77), Expect = 0.051
Identities = 6/54 (11%), Positives = 14/54 (25%), Gaps = 2/54 (3%)
Query: 765 LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGP 818
D + +P + + + + V D + +T P
Sbjct: 237 TARIPVGPD-PAGIAVTPDGKKVYVALSFCNTVSVIDTAT-NTITATMAVGKNP 288
Score = 31.0 bits (68), Expect = 0.59
Identities = 6/73 (8%), Positives = 20/73 (27%), Gaps = 16/73 (21%)
Query: 647 MIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTQFEVEEEEEENYDQK 706
+K + + + ++ P + + S T
Sbjct: 224 NTVSMIDTGTNKITARIPVGP-DPAGIAVTPDGKKVYVALSFCNT--------------- 267
Query: 707 LMIWDTRSHNVSK 719
+ + DT ++ ++
Sbjct: 268 VSVIDTATNTITA 280
>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli
[TaxId: 562]}
Length = 333
Score = 47.5 bits (111), Expect = 3e-06
Identities = 9/122 (7%), Positives = 32/122 (26%), Gaps = 4/122 (3%)
Query: 741 EYILATGSADKTVALWDL-RNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHV 799
+ + + + +W+L L L ++ + SP + + R+
Sbjct: 4 QTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLA 63
Query: 800 WDLSK---IGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQK 856
+ ++ + + H G + ++ + ++
Sbjct: 64 YRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDV 123
Query: 857 PF 858
Sbjct: 124 VE 125
Score = 39.0 bits (89), Expect = 0.002
Identities = 9/83 (10%), Positives = 26/83 (31%), Gaps = 3/83 (3%)
Query: 704 DQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDL--RNL 761
Q++ +W+ + VD +V + +P Y+ + V + + +
Sbjct: 13 SQQIHVWNLNHEGALTLTQVVD-VPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDG 71
Query: 762 KLKLHSFESHKDEIFQVQWSPHN 784
L + + + +
Sbjct: 72 ALTFAAESALPGSLTHISTDHQG 94
Score = 31.0 bits (68), Expect = 0.56
Identities = 8/102 (7%), Positives = 30/102 (29%), Gaps = 2/102 (1%)
Query: 703 YDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDL--RN 760
++ K + + T + P ++ A + ++ +
Sbjct: 204 WELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDG 263
Query: 761 LKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDL 802
L F+ + + + ++A+ + V+++
Sbjct: 264 SVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEI 305
Score = 28.6 bits (62), Expect = 2.9
Identities = 3/57 (5%), Positives = 18/57 (31%)
Query: 702 NYDQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDL 758
+ ++ + + + +Y++A G ++++++
Sbjct: 249 RTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEI 305
>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Paracoccus
denitrificans [TaxId: 266]}
Length = 432
Score = 47.1 bits (111), Expect = 7e-06
Identities = 19/153 (12%), Positives = 44/153 (28%), Gaps = 12/153 (7%)
Query: 704 DQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKL 763
++ + D ++ + +D A V+ + Y L D V + DL +
Sbjct: 41 AGQIALIDGSTY---EIKTVLDTGYA-VHISRLSASGRY-LFVIGRDGKVNMIDLWMKEP 95
Query: 764 K----LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPP 819
+ + ++ +A + + + D + ++
Sbjct: 96 TTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYD 155
Query: 820 ELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 852
E + A I + P I +V E
Sbjct: 156 EQEYHPEPRVAAILA---SHYRPEFIVNVKETG 185
Score = 33.2 bits (75), Expect = 0.14
Identities = 21/199 (10%), Positives = 46/199 (23%), Gaps = 25/199 (12%)
Query: 642 DDQKLMIWD--TRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTQFEVEEEE 699
D K+ + D + + +Y +A
Sbjct: 81 RDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWP---------- 130
Query: 700 EENYDQKLMIWDTRSHNV----SKPSHTVDA----HTAEVNCLSFNPYSEYILATGSADK 751
+ +I D + S T D V + + Y +
Sbjct: 131 -----PQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETG 185
Query: 752 TVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQST 811
+ L D +L + S + + + + ++ +L V D +
Sbjct: 186 KILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIE 245
Query: 812 EDAEDGPPELLFIHGGHTA 830
+ P + H
Sbjct: 246 DTGGQTPHPGRGANFVHPT 264
Score = 31.7 bits (71), Expect = 0.35
Identities = 14/109 (12%), Positives = 36/109 (33%), Gaps = 10/109 (9%)
Query: 742 YILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWD 801
T +AL D ++ ++ + + S + L G D ++++ D
Sbjct: 33 LFSVTLRDAGQIALIDGSTYEI-KTVLDTGYA-VHISRLSA-SGRYLFVIGRDGKVNMID 89
Query: 802 L-----SKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVI 845
L + + E + +A + A ++ P + ++
Sbjct: 90 LWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAG--AYWPPQYVIM 136
>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa
[TaxId: 287]}
Length = 426
Score = 46.5 bits (109), Expect = 1e-05
Identities = 20/153 (13%), Positives = 41/153 (26%), Gaps = 12/153 (7%)
Query: 704 DQKLMIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKL 763
++ + D S K +D A V+ + Y L D + + DL +
Sbjct: 41 AGQIALVDGDSK---KIVKVIDTGYA-VHISRMSASGRY-LLVIGRDARIDMIDLWAKEP 95
Query: 764 K----LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPP 819
+ + + +A + + + D + +Q
Sbjct: 96 TKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVD 155
Query: 820 ELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 852
+ A I + P I +V E
Sbjct: 156 TQTYHPEPRVAAI---IASHEHPEFIVNVKETG 185
Score = 35.7 bits (81), Expect = 0.023
Identities = 27/225 (12%), Positives = 58/225 (25%), Gaps = 30/225 (13%)
Query: 595 KGTHHIEEVMYLENKTRAQICQLLDKLRLLIDVAWHLLHESLFGSVADDQKLMIWDTRSH 654
K T + V Y + L D W H + + K+ + D++
Sbjct: 182 KETGKVLLVNY--KDIDNLTVTSIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDR 239
Query: 655 NVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTQFEVEEEEEENYDQKLMIWDTRS 714
+S +P + +T + +
Sbjct: 240 RLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLG----------DGSISLIGTDPKNHP 289
Query: 715 HNVSKPSHTVDAHTAEVNCLSFNPYSEYILA------TGSADKTVALWDLRNLKL----- 763
K + + +P S ++ ++VA++DL+NL
Sbjct: 290 QYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVL 349
Query: 764 ---KLHSFESHKDEIFQVQWSPHNETILASSGT----DRRLHVWD 801
+ + Q +++ + + S L V D
Sbjct: 350 PIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVD 394
Score = 28.4 bits (62), Expect = 4.3
Identities = 12/129 (9%), Positives = 37/129 (28%), Gaps = 21/129 (16%)
Query: 647 MIWDTRSHNVSKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTQFEVEEEEEENYDQK 706
K + + +P S ++ + + + Q
Sbjct: 283 TDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFN---------PDARISQS 333
Query: 707 LMIWDTRSH-------NVSKPSHTVDAHTAEVNCLSFNPYSEYIL----ATGSADKTVAL 755
+ ++D ++ +++ + + V +N + + + + +
Sbjct: 334 VAVFDLKNLDAKYQVLPIAEWA-DLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVV 392
Query: 756 WDLRNLKLK 764
D + LKLK
Sbjct: 393 VDDKTLKLK 401
>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal
domain {Pseudomonas nautica [TaxId: 2743]}
Length = 441
Score = 33.7 bits (77), Expect = 0.095
Identities = 16/131 (12%), Positives = 36/131 (27%), Gaps = 9/131 (6%)
Query: 723 TVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSP 782
D H ++ +Y+ A+ VA L +K + + I ++
Sbjct: 66 NGDCHHPHISMTDGRYDGKYLFINDKANTRVARIRLDIMKTDKITHIPNVQAIHGLRLQK 125
Query: 783 HNETILASSGTDRRLH------VWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFS 836
+T + + + L + DAE I G + +
Sbjct: 126 VPKTNYVFCNAEFVIPQPNDGTDFSLDNSYTMFTAIDAETMDVAWQVIVDG---NLDNTD 182
Query: 837 WNPNEPWVICS 847
+ + +
Sbjct: 183 ADYTGKYATST 193
Score = 27.6 bits (61), Expect = 8.2
Identities = 13/106 (12%), Positives = 35/106 (33%), Gaps = 10/106 (9%)
Query: 718 SKPSHTVDAHTAEVNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIF- 776
S+ + + + +P +Y +A G TV++ + L +D I
Sbjct: 248 SEFTRYIPVPKNPHGL-NTSPDGKYFIANGKLSPTVSVIAIDKLDDLFEDKIELRDTIVA 306
Query: 777 --QVQWSP------HNETILASSGTDRRLHVWDLSKIGEEQSTEDA 814
++ P + D ++ W+++ + + +
Sbjct: 307 EPELGLGPLHTTFDGRGNAYTTLFIDSQVCKWNIADAIKHYNGDRV 352
>d1b6ga_ c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacter
autotrophicus [TaxId: 280]}
Length = 310
Score = 29.1 bits (63), Expect = 2.3
Identities = 13/80 (16%), Positives = 18/80 (22%), Gaps = 18/80 (22%)
Query: 768 FESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGG 827
F + F + R H D E D L +HG
Sbjct: 12 FSNLDQYPFSPNY-----LDDLPGYPGLRAHYLD----------EGNSDAEDVFLCLHGE 56
Query: 828 HTAKISDFSWNPNEPWVICS 847
T + + P S
Sbjct: 57 PT---WSYLYRKMIPVFAES 73
>d1j1ia_ c.69.1.10 (A:) Meta cleavage compound hydrolase CarC
{Janthinobacterium sp. J3 [TaxId: 213804]}
Length = 268
Score = 27.5 bits (59), Expect = 6.3
Identities = 10/31 (32%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Query: 812 EDAEDGPPELLFIHGGHTAKISDFSWNPNEP 842
+A G P ++ IHGG S+ +W P
Sbjct: 17 LEAGKGQP-VILIHGGGAGAESEGNWRNVIP 46
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.316 0.132 0.385
Gapped
Lambda K H
0.267 0.0373 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 3,072,879
Number of extensions: 141868
Number of successful extensions: 614
Number of sequences better than 10.0: 1
Number of HSP's gapped: 481
Number of HSP's successfully gapped: 122
Length of query: 860
Length of database: 2,407,596
Length adjustment: 93
Effective length of query: 767
Effective length of database: 1,130,706
Effective search space: 867251502
Effective search space used: 867251502
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 57 (26.7 bits)