Your job contains 1 sequence.
>psy4579
MFLKKPFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNE
DAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQF
DASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAV
VEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIH
RLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHE
GEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKEGLIEG
TYNCYLQR
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy4579
(368 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|F2Z4M0 - symbol:RBBP4 "Histone-binding protein ... 632 3.3e-65 2
UNIPROTKB|Q9W7I5 - symbol:RBBP4 "Histone-binding protein ... 632 3.3e-65 2
UNIPROTKB|Q3MHL3 - symbol:RBBP4 "Histone-binding protein ... 632 3.3e-65 2
UNIPROTKB|E2QXR8 - symbol:RBBP4 "Uncharacterized protein"... 632 3.3e-65 2
UNIPROTKB|Q09028 - symbol:RBBP4 "Histone-binding protein ... 632 3.3e-65 2
MGI|MGI:1194912 - symbol:Rbbp4 "retinoblastoma binding pr... 632 3.3e-65 2
RGD|1593768 - symbol:Rbbp4 "retinoblastoma binding protei... 632 3.3e-65 2
UNIPROTKB|Q5RF92 - symbol:RBBP4 "Histone-binding protein ... 627 1.1e-64 2
UNIPROTKB|Q6INH0 - symbol:rbbp4-b "Histone-binding protei... 625 1.8e-64 2
UNIPROTKB|O93377 - symbol:rbbp4-a "Histone-binding protei... 621 4.8e-64 2
UNIPROTKB|Q5M7K4 - symbol:rbbp4 "Histone-binding protein ... 639 1.4e-62 1
ZFIN|ZDB-GENE-030131-848 - symbol:rbb4l "retinoblastoma b... 600 1.3e-61 2
RGD|1563620 - symbol:RGD1563620 "similar to retinoblastom... 597 1.6e-61 2
ZFIN|ZDB-GENE-030131-445 - symbol:rbb4 "retinoblastoma bi... 628 2.1e-61 1
UNIPROTKB|I3LKT8 - symbol:RBBP4 "Uncharacterized protein"... 614 6.4e-60 1
UNIPROTKB|Q5R654 - symbol:RBBP7 "Histone-binding protein ... 572 2.9e-58 2
FB|FBgn0263979 - symbol:Caf1 "Chromatin assembly factor 1... 597 4.0e-58 1
UNIPROTKB|E9PC52 - symbol:RBBP7 "Histone-binding protein ... 594 8.4e-58 1
UNIPROTKB|K7GRD3 - symbol:LOC100519001 "Uncharacterized p... 590 2.2e-57 1
UNIPROTKB|Q8AVH1 - symbol:rbbp7 "Histone-binding protein ... 586 5.9e-57 1
UNIPROTKB|Q6P315 - symbol:rbbp7 "Histone-binding protein ... 585 7.5e-57 1
UNIPROTKB|Q16576 - symbol:RBBP7 "Histone-binding protein ... 578 4.2e-56 1
UNIPROTKB|Q4R304 - symbol:RBBP7 "Histone-binding protein ... 578 4.2e-56 1
MGI|MGI:1194910 - symbol:Rbbp7 "retinoblastoma binding pr... 578 4.2e-56 1
RGD|620125 - symbol:Rbbp7 "retinoblastoma binding protein... 578 4.2e-56 1
UNIPROTKB|Q3SWX8 - symbol:RBBP7 "Histone-binding protein ... 574 1.1e-55 1
UNIPROTKB|E2RM49 - symbol:RBBP7 "Uncharacterized protein"... 574 1.1e-55 1
UNIPROTKB|F1SQR0 - symbol:LOC100519001 "Uncharacterized p... 574 1.1e-55 1
UNIPROTKB|E2RM67 - symbol:RBBP7 "Uncharacterized protein"... 572 1.8e-55 1
UNIPROTKB|I3LV46 - symbol:LOC100519001 "Uncharacterized p... 572 1.8e-55 1
UNIPROTKB|K7GKX8 - symbol:LOC100519001 "Uncharacterized p... 560 3.4e-54 1
UNIPROTKB|Q9I8G9 - symbol:RBBP7 "Histone-binding protein ... 557 7.0e-54 1
WB|WBGene00003036 - symbol:lin-53 species:6239 "Caenorhab... 501 6.0e-48 1
UNIPROTKB|P90916 - symbol:lin-53 "Probable histone-bindin... 501 6.0e-48 1
UNIPROTKB|Q61Y48 - symbol:lin-53 "Probable histone-bindin... 494 3.3e-47 1
TAIR|locus:2161253 - symbol:MSI1 "MULTICOPY SUPRESSOR OF ... 438 1.2e-45 2
DICTYBASE|DDB_G0282529 - symbol:rbbD "putative Retinoblas... 441 1.4e-41 1
POMBASE|SPCC1672.10 - symbol:mis16 "kinetochore protein M... 333 2.4e-33 2
WB|WBGene00004312 - symbol:rba-1 species:6239 "Caenorhabd... 331 6.2e-30 1
TAIR|locus:2059856 - symbol:MSI2 "AT2G16780" species:3702... 319 1.2e-28 1
TAIR|locus:2131551 - symbol:MSI3 "MULTICOPY SUPPRESSOR OF... 309 1.3e-27 1
UNIPROTKB|C9JPP3 - symbol:RBBP4 "Histone-binding protein ... 300 1.2e-26 1
UNIPROTKB|E9PND5 - symbol:RBBP4 "Histone-binding protein ... 251 1.9e-21 1
ASPGD|ASPL0000017699 - symbol:AN8187 species:162425 "Emer... 258 1.1e-20 1
UNIPROTKB|C9J7L0 - symbol:RBBP7 "Histone-binding protein ... 217 1.6e-17 1
POMBASE|SPAC29A4.18 - symbol:prw1 "Clr6 histone deacetyla... 217 2.4e-16 2
POMBASE|SPAC25H1.06 - symbol:pcf3 "CAF assembly factor (C... 217 1.8e-15 1
SGD|S000000782 - symbol:HAT2 "Subunit of the Hat1p-Hat2p ... 211 8.9e-15 1
GENEDB_PFALCIPARUM|PF13_0149 - symbol:PF13_0149 "chromati... 205 1.1e-13 1
UNIPROTKB|Q8IE52 - symbol:PF13_0149 "Chromatin assembly f... 205 1.1e-13 1
GENEDB_PFALCIPARUM|PF14_0314 - symbol:PF14_0314 "chromati... 199 2.8e-13 1
UNIPROTKB|Q8ILD0 - symbol:PF14_0314 "Chromatin assembly f... 199 2.8e-13 1
CGD|CAL0003130 - symbol:orf19.7185 species:5476 "Candida ... 158 1.3e-10 3
UNIPROTKB|Q5A0B0 - symbol:CaO19.7185 "Putative uncharacte... 158 1.3e-10 3
TAIR|locus:2134408 - symbol:NFC5 "AT4G29730" species:3702... 118 9.6e-10 2
GENEDB_PFALCIPARUM|PFA0520c - symbol:PFA0520c "chromatin ... 157 1.8e-08 1
UNIPROTKB|Q8I238 - symbol:PFA_0520c "Chromatin assembly f... 157 1.8e-08 1
CGD|CAL0005992 - symbol:orf19.3581 species:5476 "Candida ... 156 2.3e-08 1
CGD|CAL0005349 - symbol:HAT2 species:5476 "Candida albica... 154 2.9e-08 1
UNIPROTKB|Q59RH5 - symbol:HAT2 "Histone acetyltransferase... 154 2.9e-08 1
SGD|S000000399 - symbol:MSI1 "Subunit of chromatin assemb... 153 4.6e-08 1
TAIR|locus:2050372 - symbol:FVE species:3702 "Arabidopsis... 134 3.8e-06 2
UNIPROTKB|Q9BQ67 - symbol:GRWD1 "Glutamate-rich WD repeat... 135 5.3e-06 1
FB|FBgn0022288 - symbol:l(2)09851 "lethal (2) 09851" spec... 133 9.2e-06 1
UNIPROTKB|Q1JQD2 - symbol:GRWD1 "Glutamate-rich WD repeat... 130 1.9e-05 1
MGI|MGI:2141989 - symbol:Grwd1 "glutamate-rich WD repeat ... 128 3.2e-05 1
WB|WBGene00021899 - symbol:Y54H5A.1 species:6239 "Caenorh... 127 4.2e-05 1
DICTYBASE|DDB_G0291566 - symbol:grwd1 "glutamate-rich WD ... 127 4.6e-05 1
UNIPROTKB|E2RBY0 - symbol:GRWD1 "Uncharacterized protein"... 126 5.2e-05 1
UNIPROTKB|E1BWN6 - symbol:CORO2A "Coronin" species:9031 "... 127 5.2e-05 1
UNIPROTKB|F1RL85 - symbol:GRWD1 "Uncharacterized protein"... 126 5.3e-05 1
MGI|MGI:2183448 - symbol:Coro6 "coronin 6" species:10090 ... 126 5.8e-05 1
UNIPROTKB|Q6QEF8 - symbol:CORO6 "Coronin-6" species:9606 ... 126 5.8e-05 1
RGD|708560 - symbol:Coro6 "coronin 6" species:10116 "Ratt... 126 5.8e-05 1
GENEDB_PFALCIPARUM|PFL2460w - symbol:PFL2460w "coronin" s... 125 0.00011 1
UNIPROTKB|Q8I4S2 - symbol:PFL2460w "Coronin" species:3632... 125 0.00011 1
UNIPROTKB|F1LMV9 - symbol:Coro2b "Coronin" species:10116 ... 123 0.00013 1
MGI|MGI:2444283 - symbol:Coro2b "coronin, actin binding p... 122 0.00017 1
UNIPROTKB|E1C2B6 - symbol:E1C2B6 "Coronin" species:9031 "... 122 0.00017 1
FB|FBgn0022786 - symbol:Hira "Hira" species:7227 "Drosoph... 126 0.00017 1
UNIPROTKB|G5E5F8 - symbol:CORO2B "Coronin" species:9913 "... 121 0.00019 1
RGD|1310649 - symbol:Grwd1 "glutamate-rich WD repeat cont... 121 0.00019 1
UNIPROTKB|E2REL6 - symbol:CORO2B "Coronin" species:9615 "... 121 0.00021 1
UNIPROTKB|F1SJH0 - symbol:CORO2B "Coronin" species:9823 "... 121 0.00022 1
UNIPROTKB|A6QLZ8 - symbol:CORO6 "Coronin" species:9913 "B... 120 0.00023 1
ASPGD|ASPL0000003994 - symbol:AN6160 species:162425 "Emer... 121 0.00027 1
UNIPROTKB|Q9UQ03 - symbol:CORO2B "Coronin-2B" species:960... 120 0.00028 1
UNIPROTKB|F8VSA4 - symbol:CORO1C "Coronin" species:9606 "... 105 0.00071 1
ASPGD|ASPL0000069856 - symbol:AN7205 species:162425 "Emer... 102 0.00073 2
UNIPROTKB|F8VRE9 - symbol:CORO1C "Coronin" species:9606 "... 105 0.00074 1
UNIPROTKB|F1NIQ7 - symbol:CORO1C "Coronin" species:9031 "... 108 0.00093 1
UNIPROTKB|F1NIQ6 - symbol:CORO1C "Coronin" species:9031 "... 108 0.00095 1
UNIPROTKB|F8VTT6 - symbol:CORO1C "Coronin" species:9606 "... 105 0.00097 1
>UNIPROTKB|F2Z4M0 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9031
"Gallus gallus" [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0016589 "NURF complex"
evidence=IEA] [GO:0031497 "chromatin assembly" evidence=IEA]
[GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0035098 "ESC/E(Z)
complex" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 IPI:IPI00592914
EMBL:AADN02043764 ProteinModelPortal:F2Z4M0 SMR:F2Z4M0 PRIDE:F2Z4M0
Ensembl:ENSGALT00000005575 Uniprot:F2Z4M0
Length = 425
Score = 632 (227.5 bits), Expect = 3.3e-65, Sum P(2) = 3.3e-65
Identities = 140/257 (54%), Positives = 174/257 (67%)
Query: 7 FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDA 66
FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVT P E F
Sbjct: 8 FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTR---P-EGKDF-- 61
Query: 67 SNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKG--GNVQLPNEDAQFDAS- 123
S + GTHTSDEQNHL+IASVQLPN+DAQFDAS+YD++KG G + + +
Sbjct: 62 SIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKI 121
Query: 124 NYD--TDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKE---NRVIDAKTIFTGHT 178
N++ ++ Y + NP + +SD + ++D P + + + GH
Sbjct: 122 NHEGEVNRARY-MPQNPCIIATKTPSSD---VLVFDYTKHPSKPDPSGECNPDLRLRGHQ 177
Query: 179 AVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYS 238
+ YGLSWNP+L+G+LLSASDDHTICLWDI+A PKE +V+DAKTIFTGHTAVVED S
Sbjct: 178 ---KEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVS 234
Query: 239 ---IHRLILGTHTSDEQ 252
+H + G+ D++
Sbjct: 235 WHLLHESLFGSVADDQK 251
Score = 614 (221.2 bits), Expect = 6.4e-60, P = 6.4e-60
Identities = 110/122 (90%), Positives = 122/122 (100%)
Query: 235 EDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIE 294
+D+SIHRL+LGTHTSDEQNHL+IASVQLPN+DAQFDAS+YD++KG+FGGFGSVSGKIEIE
Sbjct: 59 KDFSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIE 118
Query: 295 IKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQK 354
IKINHEGEVNRARYMPQNPC+IATKTPSSDVLVFDYTKHPSKPDP+GEC+PDLRLRGHQK
Sbjct: 119 IKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQK 178
Query: 355 EG 356
EG
Sbjct: 179 EG 180
Score = 50 (22.7 bits), Expect = 3.3e-65, Sum P(2) = 3.3e-65
Identities = 10/50 (20%), Positives = 26/50 (52%)
Query: 290 KIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDP 339
K+++ +H+ E+ + ++ P N ++A+ + V+D +K + P
Sbjct: 307 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSP 356
Score = 44 (20.5 bits), Expect = 1.4e-64, Sum P(2) = 1.4e-64
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 299 HEGEVNRARYMPQNPCVIATKTPSSDVLVFD 329
H EVN + P + ++AT + V ++D
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWD 302
>UNIPROTKB|Q9W7I5 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9031
"Gallus gallus" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0033186
"CAF-1 complex" evidence=ISS] [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006338
"chromatin remodeling" evidence=ISS] [GO:0008094 "DNA-dependent
ATPase activity" evidence=ISS] [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338
GO:GO:0007049 GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330 CTD:5928
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:AF097750 IPI:IPI00592914
RefSeq:NP_990183.1 UniGene:Gga.1029 ProteinModelPortal:Q9W7I5
SMR:Q9W7I5 STRING:Q9W7I5 PRIDE:Q9W7I5 GeneID:395658 KEGG:gga:395658
InParanoid:Q9W7I5 NextBio:20815730 Uniprot:Q9W7I5
Length = 425
Score = 632 (227.5 bits), Expect = 3.3e-65, Sum P(2) = 3.3e-65
Identities = 140/257 (54%), Positives = 174/257 (67%)
Query: 7 FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDA 66
FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVT P E F
Sbjct: 8 FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTR---P-EGKDF-- 61
Query: 67 SNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKG--GNVQLPNEDAQFDAS- 123
S + GTHTSDEQNHL+IASVQLPN+DAQFDAS+YD++KG G + + +
Sbjct: 62 SIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKI 121
Query: 124 NYD--TDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKE---NRVIDAKTIFTGHT 178
N++ ++ Y + NP + +SD + ++D P + + + GH
Sbjct: 122 NHEGEVNRARY-MPQNPCIIATKTPSSD---VLVFDYTKHPSKPDPSGECNPDLRLRGHQ 177
Query: 179 AVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYS 238
+ YGLSWNP+L+G+LLSASDDHTICLWDI+A PKE +V+DAKTIFTGHTAVVED S
Sbjct: 178 ---KEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVS 234
Query: 239 ---IHRLILGTHTSDEQ 252
+H + G+ D++
Sbjct: 235 WHLLHESLFGSVADDQK 251
Score = 614 (221.2 bits), Expect = 6.4e-60, P = 6.4e-60
Identities = 110/122 (90%), Positives = 122/122 (100%)
Query: 235 EDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIE 294
+D+SIHRL+LGTHTSDEQNHL+IASVQLPN+DAQFDAS+YD++KG+FGGFGSVSGKIEIE
Sbjct: 59 KDFSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIE 118
Query: 295 IKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQK 354
IKINHEGEVNRARYMPQNPC+IATKTPSSDVLVFDYTKHPSKPDP+GEC+PDLRLRGHQK
Sbjct: 119 IKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQK 178
Query: 355 EG 356
EG
Sbjct: 179 EG 180
Score = 50 (22.7 bits), Expect = 3.3e-65, Sum P(2) = 3.3e-65
Identities = 10/50 (20%), Positives = 26/50 (52%)
Query: 290 KIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDP 339
K+++ +H+ E+ + ++ P N ++A+ + V+D +K + P
Sbjct: 307 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSP 356
Score = 44 (20.5 bits), Expect = 1.4e-64, Sum P(2) = 1.4e-64
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 299 HEGEVNRARYMPQNPCVIATKTPSSDVLVFD 329
H EVN + P + ++AT + V ++D
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWD 302
>UNIPROTKB|Q3MHL3 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9913
"Bos taurus" [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0016581
"NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0006338 GO:GO:0007049 GO:GO:0035098 GO:GO:0031497
GO:GO:0016589 GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752
OMA:CQPDLRL GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265
GO:GO:0008094 HOGENOM:HOG000160330 EMBL:BT030530 EMBL:BC105195
IPI:IPI00717704 RefSeq:NP_001070481.1 UniGene:Bt.101874
ProteinModelPortal:Q3MHL3 SMR:Q3MHL3 STRING:Q3MHL3 PRIDE:Q3MHL3
Ensembl:ENSBTAT00000007758 GeneID:767940 KEGG:bta:767940 CTD:5928
HOVERGEN:HBG053236 InParanoid:Q3MHL3 OrthoDB:EOG4DBTDH
NextBio:20918297 Uniprot:Q3MHL3
Length = 425
Score = 632 (227.5 bits), Expect = 3.3e-65, Sum P(2) = 3.3e-65
Identities = 140/257 (54%), Positives = 174/257 (67%)
Query: 7 FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDA 66
FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVT P E F
Sbjct: 8 FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTR---P-EGKDF-- 61
Query: 67 SNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKG--GNVQLPNEDAQFDAS- 123
S + GTHTSDEQNHL+IASVQLPN+DAQFDAS+YD++KG G + + +
Sbjct: 62 SIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKI 121
Query: 124 NYD--TDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKE---NRVIDAKTIFTGHT 178
N++ ++ Y + NP + +SD + ++D P + + + GH
Sbjct: 122 NHEGEVNRARY-MPQNPCIIATKTPSSD---VLVFDYTKHPSKPDPSGECNPDLRLRGHQ 177
Query: 179 AVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYS 238
+ YGLSWNP+L+G+LLSASDDHTICLWDI+A PKE +V+DAKTIFTGHTAVVED S
Sbjct: 178 ---KEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVS 234
Query: 239 ---IHRLILGTHTSDEQ 252
+H + G+ D++
Sbjct: 235 WHLLHESLFGSVADDQK 251
Score = 614 (221.2 bits), Expect = 6.4e-60, P = 6.4e-60
Identities = 110/122 (90%), Positives = 122/122 (100%)
Query: 235 EDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIE 294
+D+SIHRL+LGTHTSDEQNHL+IASVQLPN+DAQFDAS+YD++KG+FGGFGSVSGKIEIE
Sbjct: 59 KDFSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIE 118
Query: 295 IKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQK 354
IKINHEGEVNRARYMPQNPC+IATKTPSSDVLVFDYTKHPSKPDP+GEC+PDLRLRGHQK
Sbjct: 119 IKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQK 178
Query: 355 EG 356
EG
Sbjct: 179 EG 180
Score = 50 (22.7 bits), Expect = 3.3e-65, Sum P(2) = 3.3e-65
Identities = 10/50 (20%), Positives = 26/50 (52%)
Query: 290 KIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDP 339
K+++ +H+ E+ + ++ P N ++A+ + V+D +K + P
Sbjct: 307 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSP 356
Score = 44 (20.5 bits), Expect = 1.4e-64, Sum P(2) = 1.4e-64
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 299 HEGEVNRARYMPQNPCVIATKTPSSDVLVFD 329
H EVN + P + ++AT + V ++D
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWD 302
>UNIPROTKB|E2QXR8 [details] [associations]
symbol:RBBP4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0035098 "ESC/E(Z) complex" evidence=IEA]
[GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0031497 "chromatin
assembly" evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 KO:K10752 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 CTD:5928
EMBL:AAEX03001654 RefSeq:XP_864445.1 ProteinModelPortal:E2QXR8
SMR:E2QXR8 PRIDE:E2QXR8 Ensembl:ENSCAFT00000016755 GeneID:478149
KEGG:cfa:478149 NextBio:20853518 Uniprot:E2QXR8
Length = 425
Score = 632 (227.5 bits), Expect = 3.3e-65, Sum P(2) = 3.3e-65
Identities = 140/257 (54%), Positives = 174/257 (67%)
Query: 7 FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDA 66
FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVT P E F
Sbjct: 8 FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTR---P-EGKDF-- 61
Query: 67 SNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKG--GNVQLPNEDAQFDAS- 123
S + GTHTSDEQNHL+IASVQLPN+DAQFDAS+YD++KG G + + +
Sbjct: 62 SIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKI 121
Query: 124 NYD--TDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKE---NRVIDAKTIFTGHT 178
N++ ++ Y + NP + +SD + ++D P + + + GH
Sbjct: 122 NHEGEVNRARY-MPQNPCIIATKTPSSD---VLVFDYTKHPSKPDPSGECNPDLRLRGHQ 177
Query: 179 AVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYS 238
+ YGLSWNP+L+G+LLSASDDHTICLWDI+A PKE +V+DAKTIFTGHTAVVED S
Sbjct: 178 ---KEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVS 234
Query: 239 ---IHRLILGTHTSDEQ 252
+H + G+ D++
Sbjct: 235 WHLLHESLFGSVADDQK 251
Score = 614 (221.2 bits), Expect = 6.4e-60, P = 6.4e-60
Identities = 110/122 (90%), Positives = 122/122 (100%)
Query: 235 EDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIE 294
+D+SIHRL+LGTHTSDEQNHL+IASVQLPN+DAQFDAS+YD++KG+FGGFGSVSGKIEIE
Sbjct: 59 KDFSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIE 118
Query: 295 IKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQK 354
IKINHEGEVNRARYMPQNPC+IATKTPSSDVLVFDYTKHPSKPDP+GEC+PDLRLRGHQK
Sbjct: 119 IKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQK 178
Query: 355 EG 356
EG
Sbjct: 179 EG 180
Score = 50 (22.7 bits), Expect = 3.3e-65, Sum P(2) = 3.3e-65
Identities = 10/50 (20%), Positives = 26/50 (52%)
Query: 290 KIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDP 339
K+++ +H+ E+ + ++ P N ++A+ + V+D +K + P
Sbjct: 307 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSP 356
Score = 44 (20.5 bits), Expect = 1.4e-64, Sum P(2) = 1.4e-64
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 299 HEGEVNRARYMPQNPCVIATKTPSSDVLVFD 329
H EVN + P + ++AT + V ++D
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWD 302
>UNIPROTKB|Q09028 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016581 "NuRD complex" evidence=NAS;IDA] [GO:0016589 "NURF
complex" evidence=IDA] [GO:0035098 "ESC/E(Z) complex" evidence=IDA]
[GO:0033186 "CAF-1 complex" evidence=IDA] [GO:0031497 "chromatin
assembly" evidence=IDA] [GO:0008285 "negative regulation of cell
proliferation" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=IDA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IDA] [GO:0000278 "mitotic
cell cycle" evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006334 "nucleosome assembly" evidence=TAS] [GO:0034080 "CENP-A
containing nucleosome assembly at centromere" evidence=TAS]
[GO:0016580 "Sin3 complex" evidence=NAS] [GO:0042393 "histone
binding" evidence=NAS] [GO:0042826 "histone deacetylase binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Pathway_Interaction_DB:telomerasepathway
Reactome:REACT_115566 GO:GO:0008285 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CH471059 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035098
GO:GO:0042393 Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0034080
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0000278
GO:GO:0016589 GO:GO:0033186 KO:K10752 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0016580 PDB:2XU7 PDBsum:2XU7
CTD:5928 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:X74262
EMBL:X71810 EMBL:BT007309 EMBL:AK299251 EMBL:AK312571 EMBL:AK222779
EMBL:AC114489 EMBL:BC003092 EMBL:BC015123 EMBL:BC053904
EMBL:BC075836 IPI:IPI00328319 IPI:IPI00645329 IPI:IPI00877802
IPI:IPI00877934 PIR:S36112 RefSeq:NP_001128727.1
RefSeq:NP_001128728.1 RefSeq:NP_005601.1 UniGene:Hs.16003 PDB:3GFC
PDBsum:3GFC ProteinModelPortal:Q09028 SMR:Q09028 DIP:DIP-33495N
IntAct:Q09028 MINT:MINT-90543 STRING:Q09028 PhosphoSite:Q09028
DMDM:1172846 PaxDb:Q09028 PRIDE:Q09028 DNASU:5928
Ensembl:ENST00000373485 Ensembl:ENST00000373493
Ensembl:ENST00000414241 Ensembl:ENST00000458695 GeneID:5928
KEGG:hsa:5928 UCSC:uc001bvr.3 UCSC:uc001bvs.3 GeneCards:GC01P033116
HGNC:HGNC:9887 HPA:CAB006264 MIM:602923 neXtProt:NX_Q09028
PharmGKB:PA34251 InParanoid:Q09028 PhylomeDB:Q09028 ChiTaRS:RBBP4
EvolutionaryTrace:Q09028 GenomeRNAi:5928 NextBio:23094
ArrayExpress:Q09028 Bgee:Q09028 CleanEx:HS_RBBP4
Genevestigator:Q09028 GermOnline:ENSG00000162521 Uniprot:Q09028
Length = 425
Score = 632 (227.5 bits), Expect = 3.3e-65, Sum P(2) = 3.3e-65
Identities = 140/257 (54%), Positives = 174/257 (67%)
Query: 7 FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDA 66
FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVT P E F
Sbjct: 8 FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTR---P-EGKDF-- 61
Query: 67 SNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKG--GNVQLPNEDAQFDAS- 123
S + GTHTSDEQNHL+IASVQLPN+DAQFDAS+YD++KG G + + +
Sbjct: 62 SIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKI 121
Query: 124 NYD--TDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKE---NRVIDAKTIFTGHT 178
N++ ++ Y + NP + +SD + ++D P + + + GH
Sbjct: 122 NHEGEVNRARY-MPQNPCIIATKTPSSD---VLVFDYTKHPSKPDPSGECNPDLRLRGHQ 177
Query: 179 AVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYS 238
+ YGLSWNP+L+G+LLSASDDHTICLWDI+A PKE +V+DAKTIFTGHTAVVED S
Sbjct: 178 ---KEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVS 234
Query: 239 ---IHRLILGTHTSDEQ 252
+H + G+ D++
Sbjct: 235 WHLLHESLFGSVADDQK 251
Score = 614 (221.2 bits), Expect = 6.4e-60, P = 6.4e-60
Identities = 110/122 (90%), Positives = 122/122 (100%)
Query: 235 EDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIE 294
+D+SIHRL+LGTHTSDEQNHL+IASVQLPN+DAQFDAS+YD++KG+FGGFGSVSGKIEIE
Sbjct: 59 KDFSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIE 118
Query: 295 IKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQK 354
IKINHEGEVNRARYMPQNPC+IATKTPSSDVLVFDYTKHPSKPDP+GEC+PDLRLRGHQK
Sbjct: 119 IKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQK 178
Query: 355 EG 356
EG
Sbjct: 179 EG 180
Score = 50 (22.7 bits), Expect = 3.3e-65, Sum P(2) = 3.3e-65
Identities = 10/50 (20%), Positives = 26/50 (52%)
Query: 290 KIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDP 339
K+++ +H+ E+ + ++ P N ++A+ + V+D +K + P
Sbjct: 307 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSP 356
Score = 44 (20.5 bits), Expect = 1.4e-64, Sum P(2) = 1.4e-64
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 299 HEGEVNRARYMPQNPCVIATKTPSSDVLVFD 329
H EVN + P + ++AT + V ++D
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWD 302
>MGI|MGI:1194912 [details] [associations]
symbol:Rbbp4 "retinoblastoma binding protein 4"
species:10090 "Mus musculus" [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=ISO;TAS] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=ISO;IDA] [GO:0016589 "NURF complex" evidence=ISO]
[GO:0031497 "chromatin assembly" evidence=ISO] [GO:0033186 "CAF-1
complex" evidence=ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO;IDA] [GO:0042826 "histone deacetylase binding"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1194912 EMBL:CH466552 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338 GO:GO:0007049
GO:GO:0035098 GO:GO:0031497 EMBL:AL607123 GO:GO:0016589
GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752 OMA:CQPDLRL
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094
HOGENOM:HOG000160330 CTD:5928 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH
EMBL:U35141 EMBL:CU234133 EMBL:BC138568 EMBL:BC138570
IPI:IPI00828412 PIR:I49366 RefSeq:NP_033056.2 UniGene:Mm.12145
ProteinModelPortal:Q60972 SMR:Q60972 DIP:DIP-32855N IntAct:Q60972
STRING:Q60972 PhosphoSite:Q60972 REPRODUCTION-2DPAGE:Q60972
PaxDb:Q60972 PRIDE:Q60972 Ensembl:ENSMUST00000102598 GeneID:19646
KEGG:mmu:19646 InParanoid:A2A875 NextBio:296894 Bgee:Q60972
CleanEx:MM_RBBP4 Genevestigator:Q60972
GermOnline:ENSMUSG00000057236 Uniprot:Q60972
Length = 425
Score = 632 (227.5 bits), Expect = 3.3e-65, Sum P(2) = 3.3e-65
Identities = 140/257 (54%), Positives = 174/257 (67%)
Query: 7 FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDA 66
FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVT P E F
Sbjct: 8 FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTR---P-EGKDF-- 61
Query: 67 SNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKG--GNVQLPNEDAQFDAS- 123
S + GTHTSDEQNHL+IASVQLPN+DAQFDAS+YD++KG G + + +
Sbjct: 62 SIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKI 121
Query: 124 NYD--TDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKE---NRVIDAKTIFTGHT 178
N++ ++ Y + NP + +SD + ++D P + + + GH
Sbjct: 122 NHEGEVNRARY-MPQNPCIIATKTPSSD---VLVFDYTKHPSKPDPSGECNPDLRLRGHQ 177
Query: 179 AVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYS 238
+ YGLSWNP+L+G+LLSASDDHTICLWDI+A PKE +V+DAKTIFTGHTAVVED S
Sbjct: 178 ---KEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVS 234
Query: 239 ---IHRLILGTHTSDEQ 252
+H + G+ D++
Sbjct: 235 WHLLHESLFGSVADDQK 251
Score = 614 (221.2 bits), Expect = 6.4e-60, P = 6.4e-60
Identities = 110/122 (90%), Positives = 122/122 (100%)
Query: 235 EDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIE 294
+D+SIHRL+LGTHTSDEQNHL+IASVQLPN+DAQFDAS+YD++KG+FGGFGSVSGKIEIE
Sbjct: 59 KDFSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIE 118
Query: 295 IKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQK 354
IKINHEGEVNRARYMPQNPC+IATKTPSSDVLVFDYTKHPSKPDP+GEC+PDLRLRGHQK
Sbjct: 119 IKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQK 178
Query: 355 EG 356
EG
Sbjct: 179 EG 180
Score = 50 (22.7 bits), Expect = 3.3e-65, Sum P(2) = 3.3e-65
Identities = 10/50 (20%), Positives = 26/50 (52%)
Query: 290 KIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDP 339
K+++ +H+ E+ + ++ P N ++A+ + V+D +K + P
Sbjct: 307 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSP 356
Score = 44 (20.5 bits), Expect = 1.4e-64, Sum P(2) = 1.4e-64
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 299 HEGEVNRARYMPQNPCVIATKTPSSDVLVFD 329
H EVN + P + ++AT + V ++D
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWD 302
>RGD|1593768 [details] [associations]
symbol:Rbbp4 "retinoblastoma binding protein 4" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0006338
"chromatin remodeling" evidence=IEA;ISO] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA;ISO] [GO:0016581 "NuRD complex"
evidence=IEA;ISO] [GO:0016589 "NURF complex" evidence=IEA;ISO]
[GO:0031497 "chromatin assembly" evidence=IEA;ISO] [GO:0033186
"CAF-1 complex" evidence=IEA;ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=IEA;ISO] [GO:0042826 "histone deacetylase binding"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1593768 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338 GO:GO:0031497
GO:GO:0016589 GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094
EMBL:CH473968 HOGENOM:HOG000160330 CTD:5928 HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC168994 IPI:IPI00366789
RefSeq:NP_001101382.1 UniGene:Rn.224577 SMR:B5DFB2 STRING:B5DFB2
Ensembl:ENSRNOT00000029177 GeneID:313048 KEGG:rno:313048
NextBio:665530 Genevestigator:B5DFB2 Uniprot:B5DFB2
Length = 425
Score = 632 (227.5 bits), Expect = 3.3e-65, Sum P(2) = 3.3e-65
Identities = 140/257 (54%), Positives = 174/257 (67%)
Query: 7 FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDA 66
FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVT P E F
Sbjct: 8 FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTR---P-EGKDF-- 61
Query: 67 SNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKG--GNVQLPNEDAQFDAS- 123
S + GTHTSDEQNHL+IASVQLPN+DAQFDAS+YD++KG G + + +
Sbjct: 62 SIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKI 121
Query: 124 NYD--TDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKE---NRVIDAKTIFTGHT 178
N++ ++ Y + NP + +SD + ++D P + + + GH
Sbjct: 122 NHEGEVNRARY-MPQNPCIIATKTPSSD---VLVFDYTKHPSKPDPSGECNPDLRLRGHQ 177
Query: 179 AVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYS 238
+ YGLSWNP+L+G+LLSASDDHTICLWDI+A PKE +V+DAKTIFTGHTAVVED S
Sbjct: 178 ---KEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVS 234
Query: 239 ---IHRLILGTHTSDEQ 252
+H + G+ D++
Sbjct: 235 WHLLHESLFGSVADDQK 251
Score = 614 (221.2 bits), Expect = 6.4e-60, P = 6.4e-60
Identities = 110/122 (90%), Positives = 122/122 (100%)
Query: 235 EDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIE 294
+D+SIHRL+LGTHTSDEQNHL+IASVQLPN+DAQFDAS+YD++KG+FGGFGSVSGKIEIE
Sbjct: 59 KDFSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIE 118
Query: 295 IKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQK 354
IKINHEGEVNRARYMPQNPC+IATKTPSSDVLVFDYTKHPSKPDP+GEC+PDLRLRGHQK
Sbjct: 119 IKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQK 178
Query: 355 EG 356
EG
Sbjct: 179 EG 180
Score = 50 (22.7 bits), Expect = 3.3e-65, Sum P(2) = 3.3e-65
Identities = 10/50 (20%), Positives = 26/50 (52%)
Query: 290 KIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDP 339
K+++ +H+ E+ + ++ P N ++A+ + V+D +K + P
Sbjct: 307 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSP 356
Score = 44 (20.5 bits), Expect = 1.4e-64, Sum P(2) = 1.4e-64
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 299 HEGEVNRARYMPQNPCVIATKTPSSDVLVFD 329
H EVN + P + ++AT + V ++D
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWD 302
>UNIPROTKB|Q5RF92 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9601
"Pongo abelii" [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0007049
GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 CTD:5928 HOVERGEN:HBG053236
EMBL:CR857269 RefSeq:NP_001124686.1 UniGene:Pab.10290
UniGene:Pab.17706 ProteinModelPortal:Q5RF92 SMR:Q5RF92
GeneID:100461561 KEGG:pon:100461561 InParanoid:Q5RF92
Uniprot:Q5RF92
Length = 425
Score = 627 (225.8 bits), Expect = 1.1e-64, Sum P(2) = 1.1e-64
Identities = 139/257 (54%), Positives = 174/257 (67%)
Query: 7 FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDA 66
FDDAVEERVINEE+KIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVT P E F
Sbjct: 8 FDDAVEERVINEEHKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTR---P-EGKDF-- 61
Query: 67 SNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKG--GNVQLPNEDAQFDAS- 123
S + GTHTSDEQNHL+IASVQLPN+DAQFDAS+YD++KG G + + +
Sbjct: 62 SIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKI 121
Query: 124 NYD--TDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKE---NRVIDAKTIFTGHT 178
N++ ++ Y + NP + +SD + ++D P + + + GH
Sbjct: 122 NHEGEVNRARY-MPQNPCIIATKTPSSD---VLVFDYTKHPSKPDPSGECNPDLRLRGHQ 177
Query: 179 AVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYS 238
+ YGLSWNP+L+G+LLSASDDHTICLWDI+A PKE +V+DAKTIFTGHTAVVED S
Sbjct: 178 ---KEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVS 234
Query: 239 ---IHRLILGTHTSDEQ 252
+H + G+ D++
Sbjct: 235 WHLLHESLFGSVADDQK 251
Score = 614 (221.2 bits), Expect = 6.4e-60, P = 6.4e-60
Identities = 110/122 (90%), Positives = 122/122 (100%)
Query: 235 EDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIE 294
+D+SIHRL+LGTHTSDEQNHL+IASVQLPN+DAQFDAS+YD++KG+FGGFGSVSGKIEIE
Sbjct: 59 KDFSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIE 118
Query: 295 IKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQK 354
IKINHEGEVNRARYMPQNPC+IATKTPSSDVLVFDYTKHPSKPDP+GEC+PDLRLRGHQK
Sbjct: 119 IKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQK 178
Query: 355 EG 356
EG
Sbjct: 179 EG 180
Score = 50 (22.7 bits), Expect = 1.1e-64, Sum P(2) = 1.1e-64
Identities = 10/50 (20%), Positives = 26/50 (52%)
Query: 290 KIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDP 339
K+++ +H+ E+ + ++ P N ++A+ + V+D +K + P
Sbjct: 307 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSP 356
Score = 44 (20.5 bits), Expect = 4.8e-64, Sum P(2) = 4.8e-64
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 299 HEGEVNRARYMPQNPCVIATKTPSSDVLVFD 329
H EVN + P + ++AT + V ++D
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWD 302
>UNIPROTKB|Q6INH0 [details] [associations]
symbol:rbbp4-b "Histone-binding protein RBBP4-B"
species:8355 "Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0006338 "chromatin remodeling" evidence=ISS] [GO:0031497
"chromatin assembly" evidence=ISS] [GO:0033186 "CAF-1 complex"
evidence=ISS] [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0006338 GO:GO:0007049 GO:GO:0035098
GO:GO:0031497 GO:GO:0033186 KO:K10752 InterPro:IPR022052
Pfam:PF12265 HOVERGEN:HBG053236 EMBL:BC072311 RefSeq:NP_001085185.1
UniGene:Xl.86906 ProteinModelPortal:Q6INH0 SMR:Q6INH0 PRIDE:Q6INH0
DNASU:432269 GeneID:432269 KEGG:xla:432269 CTD:432269
Xenbase:XB-GENE-6255728 Uniprot:Q6INH0
Length = 425
Score = 625 (225.1 bits), Expect = 1.8e-64, Sum P(2) = 1.8e-64
Identities = 139/257 (54%), Positives = 173/257 (67%)
Query: 7 FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDA 66
FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVT P D + D
Sbjct: 8 FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTR---P--DGK-DF 61
Query: 67 SNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKG--GNVQLPNEDAQFDAS- 123
S + GTHTSDEQNHL+IASVQLPN+DAQFDAS+YD++KG G + + +
Sbjct: 62 SIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKI 121
Query: 124 NYD--TDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKE---NRVIDAKTIFTGHT 178
N++ ++ Y + NP + + D + ++D P + + + GH
Sbjct: 122 NHEGEVNRARY-MPQNPCIIATKTPSCD---VLVFDYTKHPSKPDPSGECNPDLRLRGHQ 177
Query: 179 AVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYS 238
+ YGLSWNP+L+G LLSASDDHTICLWDI+A PKE +V+DAKTIFTGHTAVVED S
Sbjct: 178 ---KEGYGLSWNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVS 234
Query: 239 ---IHRLILGTHTSDEQ 252
+H + G+ D++
Sbjct: 235 WHLLHESLFGSVADDQK 251
Score = 609 (219.4 bits), Expect = 2.2e-59, P = 2.2e-59
Identities = 109/122 (89%), Positives = 121/122 (99%)
Query: 235 EDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIE 294
+D+SIHRL+LGTHTSDEQNHL+IASVQLPN+DAQFDAS+YD++KG+FGGFGSVSGKIEIE
Sbjct: 59 KDFSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIE 118
Query: 295 IKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQK 354
IKINHEGEVNRARYMPQNPC+IATKTPS DVLVFDYTKHPSKPDP+GEC+PDLRLRGHQK
Sbjct: 119 IKINHEGEVNRARYMPQNPCIIATKTPSCDVLVFDYTKHPSKPDPSGECNPDLRLRGHQK 178
Query: 355 EG 356
EG
Sbjct: 179 EG 180
Score = 50 (22.7 bits), Expect = 1.8e-64, Sum P(2) = 1.8e-64
Identities = 10/50 (20%), Positives = 26/50 (52%)
Query: 290 KIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDP 339
K+++ +H+ E+ + ++ P N ++A+ + V+D +K + P
Sbjct: 307 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSP 356
Score = 44 (20.5 bits), Expect = 7.7e-64, Sum P(2) = 7.7e-64
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 299 HEGEVNRARYMPQNPCVIATKTPSSDVLVFD 329
H EVN + P + ++AT + V ++D
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWD 302
>UNIPROTKB|O93377 [details] [associations]
symbol:rbbp4-a "Histone-binding protein RBBP4-A"
species:8355 "Xenopus laevis" [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0007049 GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 HOVERGEN:HBG053236 EMBL:AF073787
EMBL:BC077257 RefSeq:NP_001083811.1 UniGene:Xl.537
ProteinModelPortal:O93377 SMR:O93377 PRIDE:O93377 GeneID:399131
KEGG:xla:399131 CTD:399131 Xenbase:XB-GENE-482006 Uniprot:O93377
Length = 425
Score = 621 (223.7 bits), Expect = 4.8e-64, Sum P(2) = 4.8e-64
Identities = 140/257 (54%), Positives = 171/257 (66%)
Query: 7 FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDA 66
FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWL DVT P D + D
Sbjct: 8 FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLSDVTR---P--DGK-DF 61
Query: 67 SNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKG-----GNVQLPNEDAQFD 121
S + GTHTSDEQNHL+IASVQLPN+DAQFDAS+YD++KG G+V E
Sbjct: 62 SIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKI 121
Query: 122 ASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKE---NRVIDAKTIFTGHT 178
+ + ++ Y + NP + SD + ++D P + + + GH
Sbjct: 122 THDGEVNRARY-MPQNPCIIATKTPTSD---VLVFDYTKHPSKPDPSGECNPNLRLRGHQ 177
Query: 179 AVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYS 238
+ YGLSWNP+L+G LLSASDDHTICLWDI+A PKE +V+DAKTIFTGHTAVVED S
Sbjct: 178 ---KEGYGLSWNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVS 234
Query: 239 ---IHRLILGTHTSDEQ 252
+H + G+ D++
Sbjct: 235 WHLLHESLFGSVADDQK 251
Score = 597 (215.2 bits), Expect = 4.0e-58, P = 4.0e-58
Identities = 106/122 (86%), Positives = 121/122 (99%)
Query: 235 EDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIE 294
+D+SIHRL+LGTHTSDEQNHL+IASVQLPN+DAQFDAS+YD++KG+FGGFGSVSGKIEIE
Sbjct: 59 KDFSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIE 118
Query: 295 IKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQK 354
IKI H+GEVNRARYMPQNPC+IATKTP+SDVLVFDYTKHPSKPDP+GEC+P+LRLRGHQK
Sbjct: 119 IKITHDGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECNPNLRLRGHQK 178
Query: 355 EG 356
EG
Sbjct: 179 EG 180
Score = 50 (22.7 bits), Expect = 4.8e-64, Sum P(2) = 4.8e-64
Identities = 10/50 (20%), Positives = 26/50 (52%)
Query: 290 KIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDP 339
K+++ +H+ E+ + ++ P N ++A+ + V+D +K + P
Sbjct: 307 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSP 356
Score = 44 (20.5 bits), Expect = 2.0e-63, Sum P(2) = 2.0e-63
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 299 HEGEVNRARYMPQNPCVIATKTPSSDVLVFD 329
H EVN + P + ++AT + V ++D
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWD 302
>UNIPROTKB|Q5M7K4 [details] [associations]
symbol:rbbp4 "Histone-binding protein RBBP4" species:8364
"Xenopus (Silurana) tropicalis" [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0016568 GO:GO:0007049 GO:GO:0035098 GO:GO:0031497
GO:GO:0033186 InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:BC088588 UniGene:Str.6093
ProteinModelPortal:Q5M7K4 SMR:Q5M7K4 STRING:Q5M7K4
Xenbase:XB-GENE-482002 InParanoid:Q5M7K4 Uniprot:Q5M7K4
Length = 425
Score = 639 (230.0 bits), Expect = 1.4e-62, P = 1.4e-62
Identities = 159/364 (43%), Positives = 216/364 (59%)
Query: 7 FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDA 66
FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVT P D + D
Sbjct: 8 FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTR---P--DGK-DF 61
Query: 67 SNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKG--GNVQLPNEDAQFDAS- 123
S + GTHTSDEQNHL+IASVQLPN+DAQFDAS+YD++KG G + + +
Sbjct: 62 SIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKI 121
Query: 124 NYD--TDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKE---NRVIDAKTIFTGHT 178
N++ ++ Y + NP + +SD + ++D P + + + GH
Sbjct: 122 NHEGEVNRARY-MPQNPCIIATKTPSSD---VLVFDYTKHPSKPDPSGECNPDLRLRGHQ 177
Query: 179 AVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYS 238
+ YGLSWNP+L+G LLSASDDHTICLWDI+A PKE +V+DAKTIFTGHTAVVED S
Sbjct: 178 ---KEGYGLSWNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVS 234
Query: 239 ---IHRLILGTHTSDEQNHLLIASVQLPNEDA---QFDASNYDTDKGDFGGF-------G 285
+H + G+ +D+Q L+I + N DA + + F + G
Sbjct: 235 WHLLHESLFGS-VADDQK-LMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATG 292
Query: 286 SVSGKI------EIEIKIN----HEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPS 335
S + +++K++ H+ E+ + ++ P N ++A+ + V+D +K
Sbjct: 293 SADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGE 352
Query: 336 KPDP 339
+ P
Sbjct: 353 EQSP 356
Score = 614 (221.2 bits), Expect = 6.4e-60, P = 6.4e-60
Identities = 110/122 (90%), Positives = 122/122 (100%)
Query: 235 EDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIE 294
+D+SIHRL+LGTHTSDEQNHL+IASVQLPN+DAQFDAS+YD++KG+FGGFGSVSGKIEIE
Sbjct: 59 KDFSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIE 118
Query: 295 IKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQK 354
IKINHEGEVNRARYMPQNPC+IATKTPSSDVLVFDYTKHPSKPDP+GEC+PDLRLRGHQK
Sbjct: 119 IKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQK 178
Query: 355 EG 356
EG
Sbjct: 179 EG 180
>ZFIN|ZDB-GENE-030131-848 [details] [associations]
symbol:rbb4l "retinoblastoma binding protein 4,
like" species:7955 "Danio rerio" [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-030131-848 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0035098
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 HOGENOM:HOG000160330 HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC052110 EMBL:BC067546 IPI:IPI00996854
RefSeq:NP_997775.1 UniGene:Dr.75908 ProteinModelPortal:Q7ZTY4
SMR:Q7ZTY4 STRING:Q7ZTY4 PRIDE:Q7ZTY4 Ensembl:ENSDART00000008144
GeneID:322129 KEGG:dre:322129 CTD:322129 NextBio:20807686
ArrayExpress:Q7ZTY4 Bgee:Q7ZTY4 Uniprot:Q7ZTY4
Length = 426
Score = 600 (216.3 bits), Expect = 1.3e-61, Sum P(2) = 1.3e-61
Identities = 134/261 (51%), Positives = 167/261 (63%)
Query: 4 KKPFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQ 63
K+ +DDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLT QWLPDV N
Sbjct: 4 KEVYDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDV------NRPEG 57
Query: 64 FDASNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKG---GNVQLPNEDAQF 120
D + GTHTSDEQNHL+IAS Q+PN+DAQFDAS+YD++KG G + +
Sbjct: 58 KDYVVHRLVLGTHTSDEQNHLVIASAQIPNDDAQFDASHYDSEKGAEFGGFGSVSGKIEI 117
Query: 121 DAS-NYD--TDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATP-KENRVIDAKTIFT- 175
+ N++ ++ Y + NP + SD + +D P K + D
Sbjct: 118 EIKINHEGEVNRARY-MPQNPCIIATKTPTSD---VLAFDYTKHPSKPDPSGDCSPDLRL 173
Query: 176 -GHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVV 234
GH + YGLSWNP+L+G LLSASDDHTICLWDI+ PKE +++DAKTIFTGHTAVV
Sbjct: 174 RGHQ---KEGYGLSWNPNLSGNLLSASDDHTICLWDISGAPKEGKIVDAKTIFTGHTAVV 230
Query: 235 EDYS---IHRLILGTHTSDEQ 252
ED S +H + G+ D++
Sbjct: 231 EDVSWHLLHESLFGSVADDQK 251
Score = 584 (210.6 bits), Expect = 9.6e-57, P = 9.6e-57
Identities = 104/123 (84%), Positives = 118/123 (95%)
Query: 235 EDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKG-DFGGFGSVSGKIEI 293
+DY +HRL+LGTHTSDEQNHL+IAS Q+PN+DAQFDAS+YD++KG +FGGFGSVSGKIEI
Sbjct: 58 KDYVVHRLVLGTHTSDEQNHLVIASAQIPNDDAQFDASHYDSEKGAEFGGFGSVSGKIEI 117
Query: 294 EIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQ 353
EIKINHEGEVNRARYMPQNPC+IATKTP+SDVL FDYTKHPSKPDP+G+C PDLRLRGHQ
Sbjct: 118 EIKINHEGEVNRARYMPQNPCIIATKTPTSDVLAFDYTKHPSKPDPSGDCSPDLRLRGHQ 177
Query: 354 KEG 356
KEG
Sbjct: 178 KEG 180
Score = 48 (22.0 bits), Expect = 1.3e-61, Sum P(2) = 1.3e-61
Identities = 9/43 (20%), Positives = 24/43 (55%)
Query: 290 KIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332
K+++ +H+ E+ + ++ P N ++A+ + V+D +K
Sbjct: 307 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSK 349
Score = 44 (20.5 bits), Expect = 3.3e-61, Sum P(2) = 3.3e-61
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 299 HEGEVNRARYMPQNPCVIATKTPSSDVLVFD 329
H EVN + P + ++AT + V ++D
Sbjct: 272 HTAEVNCLSFNPYSEFILATGSADKTVALWD 302
>RGD|1563620 [details] [associations]
symbol:RGD1563620 "similar to retinoblastoma binding protein 4"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1563620 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00570000079069
InterPro:IPR022052 Pfam:PF12265 OrthoDB:EOG4DBTDH IPI:IPI00368073
ProteinModelPortal:D4A250 Ensembl:ENSRNOT00000033132 Uniprot:D4A250
Length = 425
Score = 597 (215.2 bits), Expect = 1.6e-61, Sum P(2) = 1.6e-61
Identities = 137/258 (53%), Positives = 168/258 (65%)
Query: 7 FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDA 66
F+D VEERVINEEYKIWK NTPFLYDLVMTHALEWPSLTAQWLPDVT P E F
Sbjct: 8 FEDVVEERVINEEYKIWK-NTPFLYDLVMTHALEWPSLTAQWLPDVTR---P-EGKDFGI 62
Query: 67 SNYDTDKGTHTSDEQNH-LLIASVQLPNEDAQFDASNYDTDKG--GNVQLPNEDAQFDAS 123
GTHTSDEQNH L+IASVQLPN+DAQFDAS YD++KG G + + +
Sbjct: 63 HRLVL--GTHTSDEQNHHLVIASVQLPNDDAQFDASYYDSEKGEFGGFGSVSGKIEIEIK 120
Query: 124 -NYD--TDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKE---NRVIDAKTIFTGH 177
NY+ ++ Y + NP + +SD + ++D P + + ++ GH
Sbjct: 121 INYEGEVNRARY-MPQNPCIIATKTPSSD---VLVFDYTKHPSKPDPSGECNSDLHLRGH 176
Query: 178 TAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDY 237
+ YGLSWNP L+GYLLSASDDHTICLWDI+A PKE +V+ AKTIFTGHTAVVED
Sbjct: 177 Q---KEGYGLSWNPYLSGYLLSASDDHTICLWDISAVPKEGKVVGAKTIFTGHTAVVEDV 233
Query: 238 S---IHRLILGTHTSDEQ 252
S +H + G+ D++
Sbjct: 234 SWHLLHESLFGSVADDQK 251
Score = 581 (209.6 bits), Expect = 2.0e-56, P = 2.0e-56
Identities = 110/134 (82%), Positives = 124/134 (92%)
Query: 235 EDYSIHRLILGTHTSDEQNH-LLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEI 293
+D+ IHRL+LGTHTSDEQNH L+IASVQLPN+DAQFDAS YD++KG+FGGFGSVSGKIEI
Sbjct: 58 KDFGIHRLVLGTHTSDEQNHHLVIASVQLPNDDAQFDASYYDSEKGEFGGFGSVSGKIEI 117
Query: 294 EIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQ 353
EIKIN+EGEVNRARYMPQNPC+IATKTPSSDVLVFDYTKHPSKPDP+GEC+ DL LRGHQ
Sbjct: 118 EIKINYEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNSDLHLRGHQ 177
Query: 354 KEGLIEG-TYNCYL 366
KEG G ++N YL
Sbjct: 178 KEGY--GLSWNPYL 189
Score = 50 (22.7 bits), Expect = 1.6e-61, Sum P(2) = 1.6e-61
Identities = 10/50 (20%), Positives = 26/50 (52%)
Query: 290 KIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDP 339
K+++ +H+ E+ + ++ P N ++A+ + V+D +K + P
Sbjct: 307 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSP 356
Score = 43 (20.2 bits), Expect = 8.8e-61, Sum P(2) = 8.8e-61
Identities = 8/31 (25%), Positives = 17/31 (54%)
Query: 299 HEGEVNRARYMPQNPCVIATKTPSSDVLVFD 329
+ EVN + P + ++A+ +P V ++D
Sbjct: 272 YTAEVNCLSFNPNSEFILASGSPDKTVALWD 302
>ZFIN|ZDB-GENE-030131-445 [details] [associations]
symbol:rbb4 "retinoblastoma binding protein 4"
species:7955 "Danio rerio" [GO:0033186 "CAF-1 complex"
evidence=ISS] [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0006338 "chromatin
remodeling" evidence=ISS] [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-445
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BX465206
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
IPI:IPI00995625 Ensembl:ENSDART00000130326 ArrayExpress:E7FEX2
Bgee:E7FEX2 Uniprot:E7FEX2
Length = 444
Score = 628 (226.1 bits), Expect = 2.1e-61, P = 2.1e-61
Identities = 158/364 (43%), Positives = 212/364 (58%)
Query: 7 FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDA 66
FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVT P E F
Sbjct: 8 FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTR---P-EGKDF-- 61
Query: 67 SNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKG--GNVQLPNEDAQFDAS- 123
S + GTHTSDEQNHL+IASVQLPN+DAQFDAS+YD++KG G + + +
Sbjct: 62 SVHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKI 121
Query: 124 NYD--TDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTI---FTGHT 178
N++ ++ Y + NP + SD + ++D P + T GH
Sbjct: 122 NHEGEVNRARY-MPQNPCIIATKTPTSD---VLVFDYTKHPSKPDPSGECTPDLRLRGHQ 177
Query: 179 AVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYS 238
+ YGLSWNP+L+G LLSASDDHTICLWDI+ PKE +++DAKTIFTGHTAVVED S
Sbjct: 178 ---KEGYGLSWNPNLSGCLLSASDDHTICLWDISTVPKEGKIVDAKTIFTGHTAVVEDVS 234
Query: 239 ---IHRLILGTHTSDEQNHLLIASVQLPNEDAQ---FDASNYDTDKGDFGGF-------G 285
+H + G+ +D+Q L+I + N DA + + F + G
Sbjct: 235 WHLLHESLFGS-VADDQK-LMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFILATG 292
Query: 286 SVSGKI------EIEIKIN----HEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPS 335
S + +++K++ H+ E+ + ++ P N ++A+ + V+D +K
Sbjct: 293 SADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGE 352
Query: 336 KPDP 339
+ P
Sbjct: 353 EQSP 356
Score = 607 (218.7 bits), Expect = 3.5e-59, P = 3.5e-59
Identities = 108/122 (88%), Positives = 121/122 (99%)
Query: 235 EDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIE 294
+D+S+HRL+LGTHTSDEQNHL+IASVQLPN+DAQFDAS+YD++KG+FGGFGSVSGKIEIE
Sbjct: 59 KDFSVHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIE 118
Query: 295 IKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQK 354
IKINHEGEVNRARYMPQNPC+IATKTP+SDVLVFDYTKHPSKPDP+GEC PDLRLRGHQK
Sbjct: 119 IKINHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECTPDLRLRGHQK 178
Query: 355 EG 356
EG
Sbjct: 179 EG 180
>UNIPROTKB|I3LKT8 [details] [associations]
symbol:RBBP4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042826 "histone deacetylase binding" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0033186 "CAF-1
complex" evidence=IEA] [GO:0031497 "chromatin assembly"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0016581
"NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 EMBL:FP312679
EMBL:FP325261 ProteinModelPortal:I3LKT8 PRIDE:I3LKT8
Ensembl:ENSSSCT00000023350 Uniprot:I3LKT8
Length = 390
Score = 614 (221.2 bits), Expect = 6.4e-60, P = 6.4e-60
Identities = 110/122 (90%), Positives = 122/122 (100%)
Query: 235 EDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIE 294
+D+SIHRL+LGTHTSDEQNHL+IASVQLPN+DAQFDAS+YD++KG+FGGFGSVSGKIEIE
Sbjct: 24 KDFSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIE 83
Query: 295 IKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQK 354
IKINHEGEVNRARYMPQNPC+IATKTPSSDVLVFDYTKHPSKPDP+GEC+PDLRLRGHQK
Sbjct: 84 IKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQK 143
Query: 355 EG 356
EG
Sbjct: 144 EG 145
Score = 481 (174.4 bits), Expect = 2.6e-49, Sum P(2) = 2.6e-49
Identities = 112/229 (48%), Positives = 146/229 (63%)
Query: 35 MTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNE 94
MTHALEWPSLTAQWLPDVT P E F S + GTHTSDEQNHL+IASVQLPN+
Sbjct: 1 MTHALEWPSLTAQWLPDVTR---P-EGKDF--SIHRLVLGTHTSDEQNHLVIASVQLPND 54
Query: 95 DAQFDASNYDTDKG--GNVQLPNEDAQFDAS-NYD--TDKGGYGLSWNPSLNGYLLSASD 149
DAQFDAS+YD++KG G + + + N++ ++ Y + NP + +SD
Sbjct: 55 DAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARY-MPQNPCIIATKTPSSD 113
Query: 150 DHTICLWDINATPKE---NRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTI 206
+ ++D P + + + GH + YGLSWNP+L+G+LLSASDDHTI
Sbjct: 114 ---VLVFDYTKHPSKPDPSGECNPDLRLRGHQ---KEGYGLSWNPNLSGHLLSASDDHTI 167
Query: 207 CLWDINATPKENRVIDAKTIFTGHTAVVEDYS---IHRLILGTHTSDEQ 252
CLWDI+A PKE +V+DAKTIFTGHTAVVED S +H + G+ D++
Sbjct: 168 CLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQK 216
Score = 50 (22.7 bits), Expect = 2.6e-49, Sum P(2) = 2.6e-49
Identities = 10/50 (20%), Positives = 26/50 (52%)
Query: 290 KIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDP 339
K+++ +H+ E+ + ++ P N ++A+ + V+D +K + P
Sbjct: 272 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSP 321
Score = 44 (20.5 bits), Expect = 1.1e-48, Sum P(2) = 1.1e-48
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 299 HEGEVNRARYMPQNPCVIATKTPSSDVLVFD 329
H EVN + P + ++AT + V ++D
Sbjct: 237 HTAEVNCLSFNPYSEFILATGSADKTVALWD 267
>UNIPROTKB|Q5R654 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9601
"Pongo abelii" [GO:0016581 "NuRD complex" evidence=ISS] [GO:0030308
"negative regulation of cell growth" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] [GO:0070370 "cellular heat
acclimation" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0035098 GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 HOVERGEN:HBG053236 EMBL:CR860642 UniGene:Pab.19680
ProteinModelPortal:Q5R654 InParanoid:Q5R654 Uniprot:Q5R654
Length = 426
Score = 572 (206.4 bits), Expect = 2.9e-58, Sum P(2) = 2.9e-58
Identities = 121/259 (46%), Positives = 164/259 (63%)
Query: 1 MFLKKPFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNE 60
M K+ F+D VEERVINEEYKIWKKNTPFLYDLVMTHAL+WPSLT QWLP+VT P
Sbjct: 1 MASKEMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTK---PEG 57
Query: 61 DAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQF 120
D + + GTHTSDEQNHL++A V +PN+DAQFDAS+ D+DKG + +
Sbjct: 58 K---DYALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKI 114
Query: 121 DASNYDTDKGGYGLSWNPSLNGYLLSASDDHT-ICLWDIN---ATPKENRVIDAKTIFTG 176
+ +G + N ++++ + + ++D A P + + G
Sbjct: 115 ECEIKINHEGEVNRARYMPQNPHIIATKTPSSGVLVFDYTKHPAKPDPSGECNPDLRLRG 174
Query: 177 HTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVED 236
H + YGLSWN +L+G+LLSASDDHT+CLWDINA PKE +++DAK +FTGH+AVVED
Sbjct: 175 HQ---KEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAVFTGHSAVVED 231
Query: 237 YS---IHRLILGTHTSDEQ 252
+ +H + G+ D++
Sbjct: 232 VAWHLLHESLFGSVADDQK 250
Score = 557 (201.1 bits), Expect = 7.0e-54, P = 7.0e-54
Identities = 99/122 (81%), Positives = 115/122 (94%)
Query: 235 EDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIE 294
+DY++H L+LGTHTSDEQNHL++A V +PN+DAQFDAS+ D+DKG+FGGFGSV+GKIE E
Sbjct: 58 KDYALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECE 117
Query: 295 IKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQK 354
IKINHEGEVNRARYMPQNP +IATKTPSS VLVFDYTKHP+KPDP+GEC+PDLRLRGHQK
Sbjct: 118 IKINHEGEVNRARYMPQNPHIIATKTPSSGVLVFDYTKHPAKPDPSGECNPDLRLRGHQK 177
Query: 355 EG 356
EG
Sbjct: 178 EG 179
Score = 44 (20.5 bits), Expect = 2.9e-58, Sum P(2) = 2.9e-58
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 299 HEGEVNRARYMPQNPCVIATKTPSSDVLVFD 329
H EVN + P + ++AT + V ++D
Sbjct: 271 HTAEVNCLSFNPYSEFILATGSADKTVALWD 301
>FB|FBgn0263979 [details] [associations]
symbol:Caf1 "Chromatin assembly factor 1 subunit"
species:7227 "Drosophila melanogaster" [GO:0016584 "nucleosome
positioning" evidence=IDA] [GO:0042826 "histone deacetylase
binding" evidence=ISS;IDA] [GO:0031497 "chromatin assembly"
evidence=ISS;IDA] [GO:0033186 "CAF-1 complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0042393 "histone
binding" evidence=IDA;NAS;TAS] [GO:0016590 "ACF complex"
evidence=IDA] [GO:0006281 "DNA repair" evidence=TAS] [GO:0006334
"nucleosome assembly" evidence=NAS;IDA] [GO:0016573 "histone
acetylation" evidence=ISS;IDA] [GO:0016589 "NURF complex"
evidence=NAS;TAS;IPI] [GO:0035035 "histone acetyltransferase
binding" evidence=ISS;IPI] [GO:0005700 "polytene chromosome"
evidence=IDA] [GO:0042766 "nucleosome mobilization" evidence=IDA]
[GO:0006335 "DNA replication-dependent nucleosome assembly"
evidence=NAS] [GO:0003682 "chromatin binding" evidence=NAS]
[GO:0006342 "chromatin silencing" evidence=IPI] [GO:0006351
"transcription, DNA-dependent" evidence=IDA] [GO:0007346
"regulation of mitotic cell cycle" evidence=IMP] [GO:0046976
"histone methyltransferase activity (H3-K27 specific)" evidence=IC]
[GO:0046974 "histone methyltransferase activity (H3-K9 specific)"
evidence=IC] [GO:0016571 "histone methylation" evidence=IDA]
[GO:0035098 "ESC/E(Z) complex" evidence=IDA] [GO:0007307 "eggshell
chorion gene amplification" evidence=IC] [GO:0031523 "Myb complex"
evidence=IDA] [GO:0005667 "transcription factor complex"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016581 "NuRD complex" evidence=IDA] [GO:0042803 "protein
homodimerization activity" evidence=IPI] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0031491
"nucleosome binding" evidence=IDA] [GO:0042054 "histone
methyltransferase activity" evidence=IDA] [GO:0035097 "histone
methyltransferase complex" evidence=IDA] [GO:0007517 "muscle organ
development" evidence=IMP] [GO:0048813 "dendrite morphogenesis"
evidence=IMP] [GO:0048666 "neuron development" evidence=IMP]
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
[GO:0070822 "Sin3-type complex" evidence=IDA] [GO:0007379 "segment
specification" evidence=IMP] [GO:0008284 "positive regulation of
cell proliferation" evidence=IMP] [GO:0061085 "regulation of
histone H3-K27 methylation" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014297 GO:GO:0007346
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008284 GO:GO:0006281 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0006351
GO:GO:0005667 GO:GO:0000122 GO:GO:0000910 GO:GO:0048813
GO:GO:0007517 GO:GO:0035098 GO:GO:0007379 GO:GO:0006342
GO:GO:0051567 GO:GO:0042393 GO:GO:0005700 GO:GO:0042826
GO:GO:0035035 GO:GO:0042766 GO:GO:0016584 GO:GO:0006334
GO:GO:0016589 GO:GO:0033186 EMBL:U62388 EMBL:AM294392 EMBL:AM294393
EMBL:AM294394 EMBL:AM294395 EMBL:AM294396 EMBL:AM294397
EMBL:AM294398 EMBL:AM294399 EMBL:AM294400 EMBL:AM294401
EMBL:AM294402 EMBL:AM294403 EMBL:AY061408 RefSeq:NP_524354.1
UniGene:Dm.1657 PDB:2XYI PDB:2YB8 PDB:2YBA PDB:3C99 PDB:3C9C
PDBsum:2XYI PDBsum:2YB8 PDBsum:2YBA PDBsum:3C99 PDBsum:3C9C
ProteinModelPortal:Q24572 SMR:Q24572 DIP:DIP-23697N IntAct:Q24572
MINT:MINT-252601 STRING:Q24572 PaxDb:Q24572 PRIDE:Q24572
EnsemblMetazoa:FBtr0083052 GeneID:41836 KEGG:dme:Dmel_CG4236
CTD:41836 FlyBase:FBgn0263347 GeneTree:ENSGT00570000079069
InParanoid:Q24572 KO:K10752 OMA:CQPDLRL OrthoDB:EOG4ZCRKP
PhylomeDB:Q24572 EvolutionaryTrace:Q24572 GenomeRNAi:41836
NextBio:825799 Bgee:Q24572 GermOnline:CG4236 GO:GO:0031523
GO:GO:0016581 GO:GO:0070822 GO:GO:0007307 GO:GO:0070734
InterPro:IPR022052 Pfam:PF12265 Uniprot:Q24572
Length = 430
Score = 597 (215.2 bits), Expect = 4.0e-58, P = 4.0e-58
Identities = 109/122 (89%), Positives = 117/122 (95%)
Query: 235 EDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIE 294
+DYS+HRLILGTHTSDEQNHLLIASVQLP+EDAQFD S+YD +KG+FGGFGSV GKIEIE
Sbjct: 63 KDYSVHRLILGTHTSDEQNHLLIASVQLPSEDAQFDGSHYDNEKGEFGGFGSVCGKIEIE 122
Query: 295 IKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQK 354
IKINHEGEVNRARYMPQN CVIATKTPSSDVLVFDYTKHPSKP+P+GEC PDLRLRGHQK
Sbjct: 123 IKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQK 182
Query: 355 EG 356
EG
Sbjct: 183 EG 184
Score = 403 (146.9 bits), Expect = 2.4e-50, Sum P(3) = 2.4e-50
Identities = 80/102 (78%), Positives = 86/102 (84%)
Query: 7 FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDA 66
FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVT +D + D
Sbjct: 12 FDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTK-----QDGK-DY 65
Query: 67 SNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKG 108
S + GTHTSDEQNHLLIASVQLP+EDAQFD S+YD +KG
Sbjct: 66 SVHRLILGTHTSDEQNHLLIASVQLPSEDAQFDGSHYDNEKG 107
Score = 330 (121.2 bits), Expect = 3.0e-33, Sum P(2) = 3.0e-33
Identities = 81/176 (46%), Positives = 103/176 (58%)
Query: 81 QNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQFDASNYDTDKGGYGLSWNPSL 140
QN +IA+ + P+ D +D K + P+ + Q D K GYGLSWNP+L
Sbjct: 139 QNACVIAT-KTPSSDVLV----FDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNL 193
Query: 141 NGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSA 200
NGYLLSASDDHTICLWDINATPKE+RVIDAK IFTGHTAVVE ++W+ S
Sbjct: 194 NGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVE---DVAWHLLHESLFGSV 250
Query: 201 SDDHTICLWDI--NATPKENRVIDAKTIFTGHTAVVEDYSIH---RLILGTHTSDE 251
+DD + +WD N T K + +DA HTA V S + IL T ++D+
Sbjct: 251 ADDQKLMIWDTRNNNTSKPSHTVDA------HTAEVNCLSFNPYSEFILATGSADK 300
Score = 101 (40.6 bits), Expect = 2.4e-50, Sum P(3) = 2.4e-50
Identities = 32/102 (31%), Positives = 44/102 (43%)
Query: 114 PNEDAQFDASNYDTDKGGY--GLSWNPSLNGYLLSASDDHTICLWDI--NATPKENRVID 169
P E DA N T ++W+ S +DD + +WD N T K + +D
Sbjct: 215 PKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVD 274
Query: 170 AKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDI 211
A HTA V LS+NP L + S D T+ LWD+
Sbjct: 275 A------HTAEVNC---LSFNPYSEFILATGSADKTVALWDL 307
Score = 101 (40.6 bits), Expect = 1.8e-46, Sum P(2) = 1.8e-46
Identities = 31/112 (27%), Positives = 50/112 (44%)
Query: 134 LSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSL 193
LS+NP L + S D T+ LWD+ N + + F H + + + W+P
Sbjct: 283 LSFNPYSEFILATGSADKTVALWDLR-----NLKLKLHS-FESHKDEI---FQVQWSPHN 333
Query: 194 NGYLLSASDDHTICLWDINATPKENRVIDAKT-------IFTGHTAVVEDYS 238
L S+ D + +WD++ +E DA+ I GHTA + D+S
Sbjct: 334 ETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFS 385
Score = 48 (22.0 bits), Expect = 2.4e-50, Sum P(3) = 2.4e-50
Identities = 9/43 (20%), Positives = 24/43 (55%)
Query: 290 KIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332
K+++ +H+ E+ + ++ P N ++A+ + V+D +K
Sbjct: 311 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 353
Score = 44 (20.5 bits), Expect = 1.7e-40, Sum P(2) = 1.7e-40
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 299 HEGEVNRARYMPQNPCVIATKTPSSDVLVFD 329
H EVN + P + ++AT + V ++D
Sbjct: 276 HTAEVNCLSFNPYSEFILATGSADKTVALWD 306
>UNIPROTKB|E9PC52 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 EMBL:AL929302 HGNC:HGNC:9890
ChiTaRS:RBBP7 IPI:IPI00879702 ProteinModelPortal:E9PC52 SMR:E9PC52
PRIDE:E9PC52 Ensembl:ENST00000404022 ArrayExpress:E9PC52
Bgee:E9PC52 Uniprot:E9PC52
Length = 416
Score = 594 (214.2 bits), Expect = 8.4e-58, P = 8.4e-58
Identities = 141/359 (39%), Positives = 205/359 (57%)
Query: 1 MFLKKPFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNE 60
M K+ F+D VEERVINEEYKIWKKNTPFLYDLVMTHAL+WPSLT QWLP+VT P
Sbjct: 1 MASKEMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTK---PEG 57
Query: 61 DAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLP---NED 117
D + + GTHTSDEQNHL++A V +PN+DAQFDAS+ D+DKGG ++ N +
Sbjct: 58 K---DYALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGGKIECEIKINHE 114
Query: 118 AQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDIN---ATPKENRVIDAKTIF 174
+ + + Y + NP + +SD + ++D A P + +
Sbjct: 115 GEVNRARY--------MPQNPHIIATKTPSSD---VLVFDYTKHPAKPDPSGECNPDLRL 163
Query: 175 TGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVV 234
GH + YGLSWN +L+G+LLSASDDHT+CLWDINA PKE +++DAK IFTGH+AVV
Sbjct: 164 RGHQ---KEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVV 220
Query: 235 EDYS---IHRLILGTHTSDEQNHLLIASVQLPNEDAQF-DASNYDTDKGDFGGF------ 284
ED + +H + G+ D++ + ++ + DA + + F +
Sbjct: 221 EDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILA 280
Query: 285 -GSVSGKI------EIEIKIN----HEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332
GS + +++K++ H+ E+ + + P N ++A+ + V+D +K
Sbjct: 281 TGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSK 339
Score = 498 (180.4 bits), Expect = 1.2e-47, P = 1.2e-47
Identities = 93/122 (76%), Positives = 107/122 (87%)
Query: 235 EDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIE 294
+DY++H L+LGTHTSDEQNHL++A V +PN+DAQFDAS+ D+DKG GKIE E
Sbjct: 58 KDYALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKG---------GKIECE 108
Query: 295 IKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQK 354
IKINHEGEVNRARYMPQNP +IATKTPSSDVLVFDYTKHP+KPDP+GEC+PDLRLRGHQK
Sbjct: 109 IKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQK 168
Query: 355 EG 356
EG
Sbjct: 169 EG 170
>UNIPROTKB|K7GRD3 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GeneTree:ENSGT00570000079069 InterPro:IPR022052
Pfam:PF12265 EMBL:CU463287 Ensembl:ENSSSCT00000034836
Uniprot:K7GRD3
Length = 416
Score = 590 (212.7 bits), Expect = 2.2e-57, P = 2.2e-57
Identities = 140/359 (38%), Positives = 205/359 (57%)
Query: 1 MFLKKPFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNE 60
M K+ F+D VEERVINEEYKIWKKNTPFLYDLVMTHAL+WPSLT QWLP+VT P
Sbjct: 1 MASKEMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTK---PEG 57
Query: 61 DAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLP---NED 117
D + + GTHTSDEQNHL++A V +PN+DAQFDAS+ D++KGG ++ N +
Sbjct: 58 K---DYALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSEKGGKIECEIKINHE 114
Query: 118 AQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDIN---ATPKENRVIDAKTIF 174
+ + + Y + NP + +SD + ++D A P + +
Sbjct: 115 GEVNRARY--------MPQNPHIIATKTPSSD---VLVFDYTKHPAKPDPSGECNPDLRL 163
Query: 175 TGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVV 234
GH + YGLSWN +L+G+LLSASDDHT+CLWDINA PKE +++DAK IFTGH+AVV
Sbjct: 164 RGHQ---KEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVV 220
Query: 235 EDYS---IHRLILGTHTSDEQNHLLIASVQLPNEDAQF-DASNYDTDKGDFGGF------ 284
ED + +H + G+ D++ + ++ + DA + + F +
Sbjct: 221 EDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILA 280
Query: 285 -GSVSGKI------EIEIKIN----HEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332
GS + +++K++ H+ E+ + + P N ++A+ + V+D +K
Sbjct: 281 TGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSK 339
Score = 494 (179.0 bits), Expect = 3.3e-47, P = 3.3e-47
Identities = 92/122 (75%), Positives = 107/122 (87%)
Query: 235 EDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIE 294
+DY++H L+LGTHTSDEQNHL++A V +PN+DAQFDAS+ D++KG GKIE E
Sbjct: 58 KDYALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSEKG---------GKIECE 108
Query: 295 IKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQK 354
IKINHEGEVNRARYMPQNP +IATKTPSSDVLVFDYTKHP+KPDP+GEC+PDLRLRGHQK
Sbjct: 109 IKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQK 168
Query: 355 EG 356
EG
Sbjct: 169 EG 170
>UNIPROTKB|Q8AVH1 [details] [associations]
symbol:rbbp7 "Histone-binding protein RBBP7" species:8355
"Xenopus laevis" [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0035098 InterPro:IPR022052
Pfam:PF12265 HOVERGEN:HBG053236 CTD:5931 KO:K11659 EMBL:BC042283
RefSeq:NP_001080364.1 UniGene:Xl.55215 ProteinModelPortal:Q8AVH1
SMR:Q8AVH1 PRIDE:Q8AVH1 GeneID:380056 KEGG:xla:380056
Xenbase:XB-GENE-487913 Uniprot:Q8AVH1
Length = 425
Score = 586 (211.3 bits), Expect = 5.9e-57, P = 5.9e-57
Identities = 103/122 (84%), Positives = 118/122 (96%)
Query: 235 EDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIE 294
+DY++H L+LGTHTSDEQNHL++A VQ+PN+DAQFDAS+YD++KG+FGGFGSVSGKIE E
Sbjct: 58 KDYALHWLVLGTHTSDEQNHLVVARVQVPNDDAQFDASHYDSEKGEFGGFGSVSGKIETE 117
Query: 295 IKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQK 354
IKINHEGEVNRARYMPQNPC+IATKTPS+DVLVFDYTKHPSKPDP+GEC PDLRLRGHQK
Sbjct: 118 IKINHEGEVNRARYMPQNPCIIATKTPSADVLVFDYTKHPSKPDPSGECSPDLRLRGHQK 177
Query: 355 EG 356
EG
Sbjct: 178 EG 179
Score = 582 (209.9 bits), Expect = 1.6e-56, P = 1.6e-56
Identities = 141/359 (39%), Positives = 205/359 (57%)
Query: 4 KKPFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQ 63
K+ F+D VEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLT QWLPDVT P
Sbjct: 4 KEMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVTR---PEGK-- 58
Query: 64 FDASNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQFDAS 123
D + + GTHTSDEQNHL++A VQ+PN+DAQFDAS+YD++KG + + +
Sbjct: 59 -DYALHWLVLGTHTSDEQNHLVVARVQVPNDDAQFDASHYDSEKGEFGGFGSVSGKIETE 117
Query: 124 ---NYD--TDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKE---NRVIDAKTIFT 175
N++ ++ Y + NP + ++D + ++D P + +
Sbjct: 118 IKINHEGEVNRARY-MPQNPCIIATKTPSAD---VLVFDYTKHPSKPDPSGECSPDLRLR 173
Query: 176 GHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVE 235
GH + YGLSWN +L+G+LLSASDDHT+CLWDI+A PKE +V+DAK +FTGH+AVVE
Sbjct: 174 GHQ---KEGYGLSWNSNLSGHLLSASDDHTVCLWDISAGPKEGKVVDAKAVFTGHSAVVE 230
Query: 236 DYS---IHRLILGTHTSDEQNHLL--IASVQLPNEDAQFDASNYDTDKGDFGGF------ 284
D + +H + G+ +D+Q ++ S DA + + F +
Sbjct: 231 DVAWHLLHESLFGS-VADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILA 289
Query: 285 -GSVSGKI------EIEIKIN----HEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332
GS + +++K++ H+ E+ + + P N ++A+ + V+D +K
Sbjct: 290 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSK 348
>UNIPROTKB|Q6P315 [details] [associations]
symbol:rbbp7 "Histone-binding protein RBBP7" species:8364
"Xenopus (Silurana) tropicalis" [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
OMA:DGFLLHV HOVERGEN:HBG053236 CTD:5931 KO:K11659 EMBL:BC064219
RefSeq:NP_989285.1 UniGene:Str.17153 ProteinModelPortal:Q6P315
SMR:Q6P315 STRING:Q6P315 Ensembl:ENSXETT00000002157 GeneID:394900
KEGG:xtr:394900 Xenbase:XB-GENE-487909 InParanoid:Q6P315
Uniprot:Q6P315
Length = 425
Score = 585 (211.0 bits), Expect = 7.5e-57, P = 7.5e-57
Identities = 144/359 (40%), Positives = 206/359 (57%)
Query: 4 KKPFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQ 63
K+ F+D VEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLT QWLPDVT P
Sbjct: 4 KEMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVTR---PEGK-- 58
Query: 64 FDASNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQFDAS 123
D + + GTHTSDEQNHL++A VQ+PN+DAQFDAS+YD++KG + + +
Sbjct: 59 -DYALHWLVLGTHTSDEQNHLVVARVQIPNDDAQFDASHYDSEKGEFGGFGSVSGKIETE 117
Query: 124 ---NYD--TDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATP-KENRVIDAKTIFT-- 175
N++ ++ Y + NP + ++D + ++D P K + D
Sbjct: 118 IKINHEGEVNRARY-MPQNPCIIATKTPSAD---VLVFDYTKHPSKPDPSGDCSPDLRLR 173
Query: 176 GHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVE 235
GH + YGLSWN +L+G+LLSASDDHT+CLWDI+A PKE +V+DAK IFTGH+AVVE
Sbjct: 174 GHQ---KEGYGLSWNSNLSGHLLSASDDHTVCLWDISAGPKEGKVVDAKAIFTGHSAVVE 230
Query: 236 DYS---IHRLILGTHTSDEQNHLL--IASVQLPNEDAQFDASNYDTDKGDFGGF------ 284
D + +H + G+ +D+Q ++ S DA + + F +
Sbjct: 231 DVAWHLLHESLFGS-VADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILA 289
Query: 285 -GSVSGKI------EIEIKIN----HEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332
GS + +++K++ H+ E+ + + P N ++A+ + V+D +K
Sbjct: 290 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSK 348
Score = 584 (210.6 bits), Expect = 9.6e-57, P = 9.6e-57
Identities = 102/122 (83%), Positives = 118/122 (96%)
Query: 235 EDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIE 294
+DY++H L+LGTHTSDEQNHL++A VQ+PN+DAQFDAS+YD++KG+FGGFGSVSGKIE E
Sbjct: 58 KDYALHWLVLGTHTSDEQNHLVVARVQIPNDDAQFDASHYDSEKGEFGGFGSVSGKIETE 117
Query: 295 IKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQK 354
IKINHEGEVNRARYMPQNPC+IATKTPS+DVLVFDYTKHPSKPDP+G+C PDLRLRGHQK
Sbjct: 118 IKINHEGEVNRARYMPQNPCIIATKTPSADVLVFDYTKHPSKPDPSGDCSPDLRLRGHQK 177
Query: 355 EG 356
EG
Sbjct: 178 EG 179
>UNIPROTKB|Q16576 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9606
"Homo sapiens" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=IDA] [GO:0030308 "negative regulation of cell growth"
evidence=IDA] [GO:0035098 "ESC/E(Z) complex" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070370 "cellular
heat acclimation" evidence=IDA] [GO:0007275 "multicellular
organismal development" evidence=TAS] [GO:0008283 "cell
proliferation" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006334 "nucleosome assembly" evidence=TAS]
[GO:0034080 "CENP-A containing nucleosome assembly at centromere"
evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0007275
Pathway_Interaction_DB:telomerasepathway Reactome:REACT_115566
GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122
GO:GO:0035098 Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0034080
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 PDB:3CFS PDB:3CFV
PDBsum:3CFS PDBsum:3CFV HOGENOM:HOG000160330 OMA:DGFLLHV
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:U35143
EMBL:X72841 EMBL:AK091911 EMBL:AL929302 IPI:IPI00395865
IPI:IPI00646512 PIR:I39181 RefSeq:NP_001185648.1 RefSeq:NP_002884.1
UniGene:Hs.495755 ProteinModelPortal:Q16576 SMR:Q16576 DIP:DIP-436N
IntAct:Q16576 MINT:MINT-90512 STRING:Q16576 PhosphoSite:Q16576
DMDM:2494891 PaxDb:Q16576 PeptideAtlas:Q16576 PRIDE:Q16576
Ensembl:ENST00000380084 Ensembl:ENST00000380087 GeneID:5931
KEGG:hsa:5931 UCSC:uc004cxt.3 GeneCards:GC0XM016772 HGNC:HGNC:9890
HPA:CAB037084 MIM:300825 neXtProt:NX_Q16576 PharmGKB:PA34254
PhylomeDB:Q16576 ChiTaRS:RBBP7 EvolutionaryTrace:Q16576
GenomeRNAi:5931 NextBio:23110 PMAP-CutDB:Q16576 ArrayExpress:Q16576
Bgee:Q16576 CleanEx:HS_RBBP7 Genevestigator:Q16576
GermOnline:ENSG00000102054 Uniprot:Q16576
Length = 425
Score = 578 (208.5 bits), Expect = 4.2e-56, P = 4.2e-56
Identities = 140/361 (38%), Positives = 205/361 (56%)
Query: 1 MFLKKPFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNE 60
M K+ F+D VEERVINEEYKIWKKNTPFLYDLVMTHAL+WPSLT QWLP+VT P
Sbjct: 1 MASKEMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTK---PEG 57
Query: 61 DAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQF 120
D + + GTHTSDEQNHL++A V +PN+DAQFDAS+ D+DKG + +
Sbjct: 58 K---DYALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKI 114
Query: 121 DAS---NYD--TDKGGYGLSWNPSLNGYLLSASDDHTICLWDIN---ATPKENRVIDAKT 172
+ N++ ++ Y + NP + +SD + ++D A P + +
Sbjct: 115 ECEIKINHEGEVNRARY-MPQNPHIIATKTPSSD---VLVFDYTKHPAKPDPSGECNPDL 170
Query: 173 IFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTA 232
GH + YGLSWN +L+G+LLSASDDHT+CLWDINA PKE +++DAK IFTGH+A
Sbjct: 171 RLRGHQ---KEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSA 227
Query: 233 VVEDYS---IHRLILGTHTSDEQNHLLIASVQLPNEDAQF-DASNYDTDKGDFGGF---- 284
VVED + +H + G+ D++ + ++ + DA + + F +
Sbjct: 228 VVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFI 287
Query: 285 ---GSVSGKI------EIEIKIN----HEGEVNRARYMPQNPCVIATKTPSSDVLVFDYT 331
GS + +++K++ H+ E+ + + P N ++A+ + V+D +
Sbjct: 288 LATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS 347
Query: 332 K 332
K
Sbjct: 348 K 348
Score = 564 (203.6 bits), Expect = 1.3e-54, P = 1.3e-54
Identities = 100/122 (81%), Positives = 116/122 (95%)
Query: 235 EDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIE 294
+DY++H L+LGTHTSDEQNHL++A V +PN+DAQFDAS+ D+DKG+FGGFGSV+GKIE E
Sbjct: 58 KDYALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECE 117
Query: 295 IKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQK 354
IKINHEGEVNRARYMPQNP +IATKTPSSDVLVFDYTKHP+KPDP+GEC+PDLRLRGHQK
Sbjct: 118 IKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQK 177
Query: 355 EG 356
EG
Sbjct: 178 EG 179
>UNIPROTKB|Q4R304 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9541
"Macaca fascicularis" [GO:0016581 "NuRD complex" evidence=ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISS]
[GO:0035098 "ESC/E(Z) complex" evidence=ISS] [GO:0070370 "cellular
heat acclimation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0030308 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0035098 GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 HOVERGEN:HBG053236
EMBL:AB179464 ProteinModelPortal:Q4R304 SMR:Q4R304 PRIDE:Q4R304
Uniprot:Q4R304
Length = 425
Score = 578 (208.5 bits), Expect = 4.2e-56, P = 4.2e-56
Identities = 140/361 (38%), Positives = 205/361 (56%)
Query: 1 MFLKKPFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNE 60
M K+ F+D VEERVINEEYKIWKKNTPFLYDLVMTHAL+WPSLT QWLP+VT P
Sbjct: 1 MASKEMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTK---PEG 57
Query: 61 DAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQF 120
D + + GTHTSDEQNHL++A V +PN+DAQFDAS+ D+DKG + +
Sbjct: 58 K---DYALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKI 114
Query: 121 DAS---NYD--TDKGGYGLSWNPSLNGYLLSASDDHTICLWDIN---ATPKENRVIDAKT 172
+ N++ ++ Y + NP + +SD + ++D A P + +
Sbjct: 115 ECEIKINHEGEVNRARY-MPQNPHIIATKTPSSD---VLVFDYTKHPAKPDPSGECNPDL 170
Query: 173 IFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTA 232
GH + YGLSWN +L+G+LLSASDDHT+CLWDINA PKE +++DAK IFTGH+A
Sbjct: 171 RLRGHQ---KEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSA 227
Query: 233 VVEDYS---IHRLILGTHTSDEQNHLLIASVQLPNEDAQF-DASNYDTDKGDFGGF---- 284
VVED + +H + G+ D++ + ++ + DA + + F +
Sbjct: 228 VVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFI 287
Query: 285 ---GSVSGKI------EIEIKIN----HEGEVNRARYMPQNPCVIATKTPSSDVLVFDYT 331
GS + +++K++ H+ E+ + + P N ++A+ + V+D +
Sbjct: 288 LATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS 347
Query: 332 K 332
K
Sbjct: 348 K 348
Score = 564 (203.6 bits), Expect = 1.3e-54, P = 1.3e-54
Identities = 100/122 (81%), Positives = 116/122 (95%)
Query: 235 EDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIE 294
+DY++H L+LGTHTSDEQNHL++A V +PN+DAQFDAS+ D+DKG+FGGFGSV+GKIE E
Sbjct: 58 KDYALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECE 117
Query: 295 IKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQK 354
IKINHEGEVNRARYMPQNP +IATKTPSSDVLVFDYTKHP+KPDP+GEC+PDLRLRGHQK
Sbjct: 118 IKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQK 177
Query: 355 EG 356
EG
Sbjct: 178 EG 179
>MGI|MGI:1194910 [details] [associations]
symbol:Rbbp7 "retinoblastoma binding protein 7"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=TAS] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016581
"NuRD complex" evidence=ISO;IDA] [GO:0030308 "negative regulation
of cell growth" evidence=ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0070370 "cellular heat
acclimation" evidence=ISO;ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1194910 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338 GO:GO:0000122
GO:GO:0035098 GeneTree:ENSGT00570000079069 GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 HOGENOM:HOG000160330
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:U35142
EMBL:AK076016 EMBL:AK135779 EMBL:AK135956 EMBL:AK136110
EMBL:AK145531 EMBL:AK145651 EMBL:AK146014 EMBL:AK146904
EMBL:AK146967 EMBL:AK147062 EMBL:AK148852 EMBL:AK153913
EMBL:AK160023 EMBL:AL672123 EMBL:BC003785 IPI:IPI00122698
PIR:I49367 RefSeq:NP_033057.3 UniGene:Mm.270186 UniGene:Mm.486181
ProteinModelPortal:Q60973 SMR:Q60973 IntAct:Q60973 STRING:Q60973
PhosphoSite:Q60973 REPRODUCTION-2DPAGE:Q60973 PaxDb:Q60973
PRIDE:Q60973 Ensembl:ENSMUST00000033720 GeneID:245688
KEGG:mmu:245688 InParanoid:A2AFJ0 NextBio:386918 Bgee:Q60973
CleanEx:MM_RBBP7 Genevestigator:Q60973
GermOnline:ENSMUSG00000031353 Uniprot:Q60973
Length = 425
Score = 578 (208.5 bits), Expect = 4.2e-56, P = 4.2e-56
Identities = 140/361 (38%), Positives = 205/361 (56%)
Query: 1 MFLKKPFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNE 60
M K+ F+D VEERVINEEYKIWKKNTPFLYDLVMTHAL+WPSLT QWLP+VT P
Sbjct: 1 MASKEMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTK---PEG 57
Query: 61 DAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQF 120
D + + GTHTSDEQNHL++A V +PN+DAQFDAS+ D+DKG + +
Sbjct: 58 K---DYALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKI 114
Query: 121 DAS---NYD--TDKGGYGLSWNPSLNGYLLSASDDHTICLWDIN---ATPKENRVIDAKT 172
+ N++ ++ Y + NP + +SD + ++D A P + +
Sbjct: 115 ECEIKINHEGEVNRARY-MPQNPHIIATKTPSSD---VLVFDYTKHPAKPDPSGECNPDL 170
Query: 173 IFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTA 232
GH + YGLSWN +L+G+LLSASDDHT+CLWDINA PKE +++DAK IFTGH+A
Sbjct: 171 RLRGHQ---KEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSA 227
Query: 233 VVEDYS---IHRLILGTHTSDEQNHLLIASVQLPNEDAQF-DASNYDTDKGDFGGF---- 284
VVED + +H + G+ D++ + ++ + DA + + F +
Sbjct: 228 VVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFI 287
Query: 285 ---GSVSGKI------EIEIKIN----HEGEVNRARYMPQNPCVIATKTPSSDVLVFDYT 331
GS + +++K++ H+ E+ + + P N ++A+ + V+D +
Sbjct: 288 LATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS 347
Query: 332 K 332
K
Sbjct: 348 K 348
Score = 564 (203.6 bits), Expect = 1.3e-54, P = 1.3e-54
Identities = 100/122 (81%), Positives = 116/122 (95%)
Query: 235 EDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIE 294
+DY++H L+LGTHTSDEQNHL++A V +PN+DAQFDAS+ D+DKG+FGGFGSV+GKIE E
Sbjct: 58 KDYALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECE 117
Query: 295 IKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQK 354
IKINHEGEVNRARYMPQNP +IATKTPSSDVLVFDYTKHP+KPDP+GEC+PDLRLRGHQK
Sbjct: 118 IKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQK 177
Query: 355 EG 356
EG
Sbjct: 178 EG 179
>RGD|620125 [details] [associations]
symbol:Rbbp7 "retinoblastoma binding protein 7" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=ISO;ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISO;ISS]
[GO:0035098 "ESC/E(Z) complex" evidence=ISO;ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0070370 "cellular heat acclimation" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:620125 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931
KO:K11659 EMBL:AF090306 EMBL:BC062012 IPI:IPI00194285
RefSeq:NP_114004.1 UniGene:Rn.3600 ProteinModelPortal:Q71UF4
SMR:Q71UF4 STRING:Q71UF4 PRIDE:Q71UF4 Ensembl:ENSRNOT00000066676
GeneID:83712 KEGG:rno:83712 UCSC:RGD:620125 InParanoid:Q71UF4
NextBio:616281 ArrayExpress:Q71UF4 Genevestigator:Q71UF4
GermOnline:ENSRNOG00000005157 Uniprot:Q71UF4
Length = 425
Score = 578 (208.5 bits), Expect = 4.2e-56, P = 4.2e-56
Identities = 140/361 (38%), Positives = 205/361 (56%)
Query: 1 MFLKKPFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNE 60
M K+ F+D VEERVINEEYKIWKKNTPFLYDLVMTHAL+WPSLT QWLP+VT P
Sbjct: 1 MASKEMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTK---PEG 57
Query: 61 DAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQF 120
D + + GTHTSDEQNHL++A V +PN+DAQFDAS+ D+DKG + +
Sbjct: 58 K---DYALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKI 114
Query: 121 DAS---NYD--TDKGGYGLSWNPSLNGYLLSASDDHTICLWDIN---ATPKENRVIDAKT 172
+ N++ ++ Y + NP + +SD + ++D A P + +
Sbjct: 115 ECEIKINHEGEVNRARY-MPQNPHIIATKTPSSD---VLVFDYTKHPAKPDPSGECNPDL 170
Query: 173 IFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTA 232
GH + YGLSWN +L+G+LLSASDDHT+CLWDINA PKE +++DAK IFTGH+A
Sbjct: 171 RLRGHQ---KEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSA 227
Query: 233 VVEDYS---IHRLILGTHTSDEQNHLLIASVQLPNEDAQF-DASNYDTDKGDFGGF---- 284
VVED + +H + G+ D++ + ++ + DA + + F +
Sbjct: 228 VVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFI 287
Query: 285 ---GSVSGKI------EIEIKIN----HEGEVNRARYMPQNPCVIATKTPSSDVLVFDYT 331
GS + +++K++ H+ E+ + + P N ++A+ + V+D +
Sbjct: 288 LATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS 347
Query: 332 K 332
K
Sbjct: 348 K 348
Score = 564 (203.6 bits), Expect = 1.3e-54, P = 1.3e-54
Identities = 100/122 (81%), Positives = 116/122 (95%)
Query: 235 EDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIE 294
+DY++H L+LGTHTSDEQNHL++A V +PN+DAQFDAS+ D+DKG+FGGFGSV+GKIE E
Sbjct: 58 KDYALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECE 117
Query: 295 IKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQK 354
IKINHEGEVNRARYMPQNP +IATKTPSSDVLVFDYTKHP+KPDP+GEC+PDLRLRGHQK
Sbjct: 118 IKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQK 177
Query: 355 EG 356
EG
Sbjct: 178 EG 179
>UNIPROTKB|Q3SWX8 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9913
"Bos taurus" [GO:0016581 "NuRD complex" evidence=ISS] [GO:0030308
"negative regulation of cell growth" evidence=ISS] [GO:0070370
"cellular heat acclimation" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 OMA:DGFLLHV HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC104613 IPI:IPI00709403
RefSeq:NP_001029810.1 UniGene:Bt.4908 ProteinModelPortal:Q3SWX8
SMR:Q3SWX8 STRING:Q3SWX8 PRIDE:Q3SWX8 Ensembl:ENSBTAT00000029923
GeneID:537402 KEGG:bta:537402 CTD:5931 InParanoid:Q3SWX8 KO:K11659
NextBio:20877129 Uniprot:Q3SWX8
Length = 425
Score = 574 (207.1 bits), Expect = 1.1e-55, P = 1.1e-55
Identities = 139/361 (38%), Positives = 205/361 (56%)
Query: 1 MFLKKPFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNE 60
M K+ F+D VEERVINEEYKIWKKNTPFLYDLVMTHAL+WPSLT QWLP+VT P
Sbjct: 1 MASKEMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTK---PEG 57
Query: 61 DAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQF 120
D + + GTHTSDEQNHL++A V +PN+DAQFDAS+ D++KG + +
Sbjct: 58 K---DYALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSEKGEFGGFGSVTGKI 114
Query: 121 DAS---NYD--TDKGGYGLSWNPSLNGYLLSASDDHTICLWDIN---ATPKENRVIDAKT 172
+ N++ ++ Y + NP + +SD + ++D A P + +
Sbjct: 115 ECEIKINHEGEVNRARY-MPQNPHIIATKTPSSD---VLVFDYTKHPAKPDPSGECNPDL 170
Query: 173 IFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTA 232
GH + YGLSWN +L+G+LLSASDDHT+CLWDINA PKE +++DAK IFTGH+A
Sbjct: 171 RLRGHQ---KEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSA 227
Query: 233 VVEDYS---IHRLILGTHTSDEQNHLLIASVQLPNEDAQF-DASNYDTDKGDFGGF---- 284
VVED + +H + G+ D++ + ++ + DA + + F +
Sbjct: 228 VVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFI 287
Query: 285 ---GSVSGKI------EIEIKIN----HEGEVNRARYMPQNPCVIATKTPSSDVLVFDYT 331
GS + +++K++ H+ E+ + + P N ++A+ + V+D +
Sbjct: 288 LATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS 347
Query: 332 K 332
K
Sbjct: 348 K 348
Score = 560 (202.2 bits), Expect = 3.4e-54, P = 3.4e-54
Identities = 99/122 (81%), Positives = 116/122 (95%)
Query: 235 EDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIE 294
+DY++H L+LGTHTSDEQNHL++A V +PN+DAQFDAS+ D++KG+FGGFGSV+GKIE E
Sbjct: 58 KDYALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSEKGEFGGFGSVTGKIECE 117
Query: 295 IKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQK 354
IKINHEGEVNRARYMPQNP +IATKTPSSDVLVFDYTKHP+KPDP+GEC+PDLRLRGHQK
Sbjct: 118 IKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQK 177
Query: 355 EG 356
EG
Sbjct: 178 EG 179
>UNIPROTKB|E2RM49 [details] [associations]
symbol:RBBP7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
CTD:5931 KO:K11659 EMBL:AAEX03026166 RefSeq:XP_857851.1
ProteinModelPortal:E2RM49 Ensembl:ENSCAFT00000020249 GeneID:480854
KEGG:cfa:480854 NextBio:20855780 Uniprot:E2RM49
Length = 425
Score = 574 (207.1 bits), Expect = 1.1e-55, P = 1.1e-55
Identities = 139/361 (38%), Positives = 205/361 (56%)
Query: 1 MFLKKPFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNE 60
M K+ F+D VEERVINEEYKIWKKNTPFLYDLVMTHAL+WPSLT QWLP+VT P
Sbjct: 1 MASKEMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTK---PEG 57
Query: 61 DAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQF 120
D + + GTHTSDEQNHL++A V +PN+DAQFDAS+ D++KG + +
Sbjct: 58 K---DYALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSEKGEFGGFGSVTGKI 114
Query: 121 DAS---NYD--TDKGGYGLSWNPSLNGYLLSASDDHTICLWDIN---ATPKENRVIDAKT 172
+ N++ ++ Y + NP + +SD + ++D A P + +
Sbjct: 115 ECEIKINHEGEVNRARY-MPQNPHIIATKTPSSD---VLVFDYTKHPAKPDPSGECNPDL 170
Query: 173 IFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTA 232
GH + YGLSWN +L+G+LLSASDDHT+CLWDINA PKE +++DAK IFTGH+A
Sbjct: 171 RLRGHQ---KEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSA 227
Query: 233 VVEDYS---IHRLILGTHTSDEQNHLLIASVQLPNEDAQF-DASNYDTDKGDFGGF---- 284
VVED + +H + G+ D++ + ++ + DA + + F +
Sbjct: 228 VVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFI 287
Query: 285 ---GSVSGKI------EIEIKIN----HEGEVNRARYMPQNPCVIATKTPSSDVLVFDYT 331
GS + +++K++ H+ E+ + + P N ++A+ + V+D +
Sbjct: 288 LATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS 347
Query: 332 K 332
K
Sbjct: 348 K 348
Score = 560 (202.2 bits), Expect = 3.4e-54, P = 3.4e-54
Identities = 99/122 (81%), Positives = 116/122 (95%)
Query: 235 EDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIE 294
+DY++H L+LGTHTSDEQNHL++A V +PN+DAQFDAS+ D++KG+FGGFGSV+GKIE E
Sbjct: 58 KDYALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSEKGEFGGFGSVTGKIECE 117
Query: 295 IKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQK 354
IKINHEGEVNRARYMPQNP +IATKTPSSDVLVFDYTKHP+KPDP+GEC+PDLRLRGHQK
Sbjct: 118 IKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQK 177
Query: 355 EG 356
EG
Sbjct: 178 EG 179
>UNIPROTKB|F1SQR0 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0070370 "cellular heat acclimation" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000122 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 KO:K11659 EMBL:CU463287 RefSeq:XP_003135004.1
ProteinModelPortal:F1SQR0 Ensembl:ENSSSCT00000013288
GeneID:100519001 KEGG:ssc:100519001 Uniprot:F1SQR0
Length = 425
Score = 574 (207.1 bits), Expect = 1.1e-55, P = 1.1e-55
Identities = 139/361 (38%), Positives = 205/361 (56%)
Query: 1 MFLKKPFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNE 60
M K+ F+D VEERVINEEYKIWKKNTPFLYDLVMTHAL+WPSLT QWLP+VT P
Sbjct: 1 MASKEMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTK---PEG 57
Query: 61 DAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQF 120
D + + GTHTSDEQNHL++A V +PN+DAQFDAS+ D++KG + +
Sbjct: 58 K---DYALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSEKGEFGGFGSVTGKI 114
Query: 121 DAS---NYD--TDKGGYGLSWNPSLNGYLLSASDDHTICLWDIN---ATPKENRVIDAKT 172
+ N++ ++ Y + NP + +SD + ++D A P + +
Sbjct: 115 ECEIKINHEGEVNRARY-MPQNPHIIATKTPSSD---VLVFDYTKHPAKPDPSGECNPDL 170
Query: 173 IFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTA 232
GH + YGLSWN +L+G+LLSASDDHT+CLWDINA PKE +++DAK IFTGH+A
Sbjct: 171 RLRGHQ---KEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSA 227
Query: 233 VVEDYS---IHRLILGTHTSDEQNHLLIASVQLPNEDAQF-DASNYDTDKGDFGGF---- 284
VVED + +H + G+ D++ + ++ + DA + + F +
Sbjct: 228 VVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFI 287
Query: 285 ---GSVSGKI------EIEIKIN----HEGEVNRARYMPQNPCVIATKTPSSDVLVFDYT 331
GS + +++K++ H+ E+ + + P N ++A+ + V+D +
Sbjct: 288 LATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS 347
Query: 332 K 332
K
Sbjct: 348 K 348
Score = 560 (202.2 bits), Expect = 3.4e-54, P = 3.4e-54
Identities = 99/122 (81%), Positives = 116/122 (95%)
Query: 235 EDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIE 294
+DY++H L+LGTHTSDEQNHL++A V +PN+DAQFDAS+ D++KG+FGGFGSV+GKIE E
Sbjct: 58 KDYALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSEKGEFGGFGSVTGKIECE 117
Query: 295 IKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQK 354
IKINHEGEVNRARYMPQNP +IATKTPSSDVLVFDYTKHP+KPDP+GEC+PDLRLRGHQK
Sbjct: 118 IKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQK 177
Query: 355 EG 356
EG
Sbjct: 178 EG 179
>UNIPROTKB|E2RM67 [details] [associations]
symbol:RBBP7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070370 "cellular heat acclimation"
evidence=IEA] [GO:0035098 "ESC/E(Z) complex" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000122 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 OMA:DGFLLHV CTD:5931 KO:K11659 EMBL:AAEX03026166
GeneID:480854 KEGG:cfa:480854 NextBio:20855780 RefSeq:XP_849201.1
ProteinModelPortal:E2RM67 Ensembl:ENSCAFT00000020227 Uniprot:E2RM67
Length = 469
Score = 572 (206.4 bits), Expect = 1.8e-55, P = 1.8e-55
Identities = 138/359 (38%), Positives = 204/359 (56%)
Query: 3 LKKPFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDA 62
L+ F+D VEERVINEEYKIWKKNTPFLYDLVMTHAL+WPSLT QWLP+VT P
Sbjct: 47 LRTVFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTK---PEGK- 102
Query: 63 QFDASNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQFDA 122
D + + GTHTSDEQNHL++A V +PN+DAQFDAS+ D++KG + + +
Sbjct: 103 --DYALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSEKGEFGGFGSVTGKIEC 160
Query: 123 S---NYD--TDKGGYGLSWNPSLNGYLLSASDDHTICLWDIN---ATPKENRVIDAKTIF 174
N++ ++ Y + NP + +SD + ++D A P + +
Sbjct: 161 EIKINHEGEVNRARY-MPQNPHIIATKTPSSD---VLVFDYTKHPAKPDPSGECNPDLRL 216
Query: 175 TGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVV 234
GH + YGLSWN +L+G+LLSASDDHT+CLWDINA PKE +++DAK IFTGH+AVV
Sbjct: 217 RGHQ---KEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVV 273
Query: 235 EDYS---IHRLILGTHTSDEQNHLLIASVQLPNEDAQF-DASNYDTDKGDFGGF------ 284
ED + +H + G+ D++ + ++ + DA + + F +
Sbjct: 274 EDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILA 333
Query: 285 -GSVSGKI------EIEIKIN----HEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332
GS + +++K++ H+ E+ + + P N ++A+ + V+D +K
Sbjct: 334 TGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSK 392
Score = 560 (202.2 bits), Expect = 3.4e-54, P = 3.4e-54
Identities = 99/122 (81%), Positives = 116/122 (95%)
Query: 235 EDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIE 294
+DY++H L+LGTHTSDEQNHL++A V +PN+DAQFDAS+ D++KG+FGGFGSV+GKIE E
Sbjct: 102 KDYALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSEKGEFGGFGSVTGKIECE 161
Query: 295 IKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQK 354
IKINHEGEVNRARYMPQNP +IATKTPSSDVLVFDYTKHP+KPDP+GEC+PDLRLRGHQK
Sbjct: 162 IKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQK 221
Query: 355 EG 356
EG
Sbjct: 222 EG 223
>UNIPROTKB|I3LV46 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00570000079069
InterPro:IPR022052 Pfam:PF12265 OMA:DGFLLHV KO:K11659 EMBL:CU463287
GeneID:100519001 KEGG:ssc:100519001 RefSeq:XP_003360284.1
Ensembl:ENSSSCT00000024779 Uniprot:I3LV46
Length = 469
Score = 572 (206.4 bits), Expect = 1.8e-55, P = 1.8e-55
Identities = 138/359 (38%), Positives = 204/359 (56%)
Query: 3 LKKPFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDA 62
L+ F+D VEERVINEEYKIWKKNTPFLYDLVMTHAL+WPSLT QWLP+VT P
Sbjct: 47 LRTVFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTK---PEGK- 102
Query: 63 QFDASNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQFDA 122
D + + GTHTSDEQNHL++A V +PN+DAQFDAS+ D++KG + + +
Sbjct: 103 --DYALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSEKGEFGGFGSVTGKIEC 160
Query: 123 S---NYD--TDKGGYGLSWNPSLNGYLLSASDDHTICLWDIN---ATPKENRVIDAKTIF 174
N++ ++ Y + NP + +SD + ++D A P + +
Sbjct: 161 EIKINHEGEVNRARY-MPQNPHIIATKTPSSD---VLVFDYTKHPAKPDPSGECNPDLRL 216
Query: 175 TGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVV 234
GH + YGLSWN +L+G+LLSASDDHT+CLWDINA PKE +++DAK IFTGH+AVV
Sbjct: 217 RGHQ---KEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVV 273
Query: 235 EDYS---IHRLILGTHTSDEQNHLLIASVQLPNEDAQF-DASNYDTDKGDFGGF------ 284
ED + +H + G+ D++ + ++ + DA + + F +
Sbjct: 274 EDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILA 333
Query: 285 -GSVSGKI------EIEIKIN----HEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332
GS + +++K++ H+ E+ + + P N ++A+ + V+D +K
Sbjct: 334 TGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSK 392
Score = 560 (202.2 bits), Expect = 3.4e-54, P = 3.4e-54
Identities = 99/122 (81%), Positives = 116/122 (95%)
Query: 235 EDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIE 294
+DY++H L+LGTHTSDEQNHL++A V +PN+DAQFDAS+ D++KG+FGGFGSV+GKIE E
Sbjct: 102 KDYALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSEKGEFGGFGSVTGKIECE 161
Query: 295 IKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQK 354
IKINHEGEVNRARYMPQNP +IATKTPSSDVLVFDYTKHP+KPDP+GEC+PDLRLRGHQK
Sbjct: 162 IKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQK 221
Query: 355 EG 356
EG
Sbjct: 222 EG 223
>UNIPROTKB|K7GKX8 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GeneTree:ENSGT00570000079069
InterPro:IPR022052 Pfam:PF12265 EMBL:CU463287
Ensembl:ENSSSCT00000032853 Uniprot:K7GKX8
Length = 254
Score = 560 (202.2 bits), Expect = 3.4e-54, P = 3.4e-54
Identities = 99/122 (81%), Positives = 116/122 (95%)
Query: 235 EDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIE 294
+DY++H L+LGTHTSDEQNHL++A V +PN+DAQFDAS+ D++KG+FGGFGSV+GKIE E
Sbjct: 102 KDYALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSEKGEFGGFGSVTGKIECE 161
Query: 295 IKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQK 354
IKINHEGEVNRARYMPQNP +IATKTPSSDVLVFDYTKHP+KPDP+GEC+PDLRLRGHQK
Sbjct: 162 IKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQK 221
Query: 355 EG 356
EG
Sbjct: 222 EG 223
Score = 474 (171.9 bits), Expect = 4.4e-45, P = 4.4e-45
Identities = 106/221 (47%), Positives = 139/221 (62%)
Query: 3 LKKPFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDA 62
L+ F+D VEERVINEEYKIWKKNTPFLYDLVMTHAL+WPSLT QWLP+VT P
Sbjct: 47 LRTVFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTK---PEGK- 102
Query: 63 QFDASNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQFDA 122
D + + GTHTSDEQNHL++A V +PN+DAQFDAS+ D++KG + + +
Sbjct: 103 --DYALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSEKGEFGGFGSVTGKIEC 160
Query: 123 S---NYD--TDKGGYGLSWNPSLNGYLLSASDDHTICLWDIN---ATPKENRVIDAKTIF 174
N++ ++ Y + NP + +SD + ++D A P + +
Sbjct: 161 EIKINHEGEVNRARY-MPQNPHIIATKTPSSD---VLVFDYTKHPAKPDPSGECNPDLRL 216
Query: 175 TGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATP 215
GH + YGLSWN +L+G+LLSASDDHT+CLWDINA P
Sbjct: 217 RGHQ---KEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGP 254
>UNIPROTKB|Q9I8G9 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9031
"Gallus gallus" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0030308
"negative regulation of cell growth" evidence=IEA] [GO:0070370
"cellular heat acclimation" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0016581 "NuRD complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 OMA:DGFLLHV HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:AF279275 IPI:IPI00594478
PIR:JC7558 RefSeq:NP_990001.1 UniGene:Gga.202
ProteinModelPortal:Q9I8G9 SMR:Q9I8G9 STRING:Q9I8G9 PRIDE:Q9I8G9
Ensembl:ENSGALT00000026698 GeneID:395390 KEGG:gga:395390
InParanoid:Q9I8G9 NextBio:20815474 Uniprot:Q9I8G9
Length = 424
Score = 557 (201.1 bits), Expect = 7.0e-54, P = 7.0e-54
Identities = 99/122 (81%), Positives = 115/122 (94%)
Query: 235 EDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIE 294
+DY++H L+LGTHTSDEQNHL++A VQ+PN+D QFD S YD++KG+FGGFGSV+GKIE E
Sbjct: 58 KDYALHWLVLGTHTSDEQNHLVVARVQIPNDD-QFDTSQYDSEKGEFGGFGSVTGKIETE 116
Query: 295 IKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQK 354
IKINHEGEVNRARYMPQNP +IATKTPS+DVLVFDYTKHPSKPDP+GEC+PDLRLRGHQK
Sbjct: 117 IKINHEGEVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRGHQK 176
Query: 355 EG 356
EG
Sbjct: 177 EG 178
Score = 554 (200.1 bits), Expect = 1.5e-53, P = 1.5e-53
Identities = 135/358 (37%), Positives = 197/358 (55%)
Query: 1 MFLKKPFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNE 60
M K+ +D VEERVI+EEYKIWKKNTPFLYDLVMTHALEWPSLT QWLPDV+ P
Sbjct: 1 MASKEVLEDTVEERVISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSR---PEG 57
Query: 61 DAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQF 120
D + + GTHTSDEQNHL++A VQ+PN+D QFD S YD++KG + +
Sbjct: 58 K---DYALHWLVLGTHTSDEQNHLVVARVQIPNDD-QFDTSQYDSEKGEFGGFGSVTGKI 113
Query: 121 DASNYDTDKGGYGLSWNPSLNGYLLSASDDHT-ICLWDINATPKE---NRVIDAKTIFTG 176
+ +G + N Y+++ + ++D P + + + G
Sbjct: 114 ETEIKINHEGEVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRG 173
Query: 177 HTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVED 236
H + YGLSWN +L G+LLSASDDHT+CLWDI+A PKE +++DAK IFTGH+AVVED
Sbjct: 174 HQ---KEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVED 230
Query: 237 YS---IHRLILGTHTSDEQNHLL--IASVQLPNEDAQFDASNYDTDKGDFGGF------- 284
+ +H + G+ +D+Q ++ S DA + + F +
Sbjct: 231 VAWHLLHESLFGS-VADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILAT 289
Query: 285 GSVSGKI------EIEIKIN----HEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332
GS + +++K++ H+ E+ + + P N ++A+ + V+D +K
Sbjct: 290 GSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSK 347
>WB|WBGene00003036 [details] [associations]
symbol:lin-53 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040027
"negative regulation of vulval development" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0048557
"embryonic digestive tract morphogenesis" evidence=IGI] [GO:0005634
"nucleus" evidence=IDA] [GO:0045138 "tail tip morphogenesis"
evidence=IMP] [GO:0001708 "cell fate specification" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070176 "DRM
complex" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0001708 GO:GO:0009792 GO:GO:0006915
GO:GO:0045892 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0040035 GO:GO:0045138 GO:GO:0040027
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0048557 HOGENOM:HOG000160330 EMBL:AF116530
EMBL:Z81097 EMBL:AL023833 PIR:T23391 RefSeq:NP_492552.1
UniGene:Cel.19610 ProteinModelPortal:P90916 SMR:P90916
IntAct:P90916 MINT:MINT-114323 STRING:P90916 PaxDb:P90916
EnsemblMetazoa:K07A1.12.1 EnsemblMetazoa:K07A1.12.2 GeneID:172802
KEGG:cel:CELE_K07A1.12 UCSC:K07A1.12.1 CTD:172802 WormBase:K07A1.12
InParanoid:P90916 OMA:DGFLLHV NextBio:877063 GO:GO:0070176
Uniprot:P90916
Length = 417
Score = 501 (181.4 bits), Expect = 6.0e-48, P = 6.0e-48
Identities = 128/349 (36%), Positives = 182/349 (52%)
Query: 8 DDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDAS 67
D E+RV N+EYKIWKKNTPFLYDLVMTHALEWPSL+ QWLPDV N D
Sbjct: 6 DGTSEDRVANDEYKIWKKNTPFLYDLVMTHALEWPSLSVQWLPDVAK---DNSDHTI--- 59
Query: 68 NYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKG--GNVQLPNEDAQFDAS-N 124
+ GTHTSDEQNHLLI+ + +P +DAQFDAS YDT++ G N + D N
Sbjct: 60 -HRLILGTHTSDEQNHLLISKICMPTDDAQFDASRYDTERSEYGGFGAVNGKVEPDIRIN 118
Query: 125 YDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDI---NATPKENRVIDAKTIFTGHTAVV 181
++ + + P + + + S + ++D +A P++N + GHT
Sbjct: 119 HEGEVNR--ARYMPQKSNIIATKSPHADVYIFDYLKHSAVPRDN-TFNPLIRLKGHT--- 172
Query: 182 EVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR 241
+ YGLSWNP+ G +LSASDD T+C WDINA + AK +F GH +VVED + H
Sbjct: 173 KEGYGLSWNPNKEGLILSASDDQTVCHWDINANQNVAGELQAKDVFKGHESVVEDVAWHV 232
Query: 242 LILGTHTS-DEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGF-------GSVSGKI-- 291
L G S + LLI V+ DA + + + F + GS +
Sbjct: 233 LHDGVFGSVGDDKKLLIWDVRTSTPGHCIDAHSAEVNCLAFNPYSEFILATGSADKTVAL 292
Query: 292 ----EIEIKIN----HEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332
+ +K++ H E+ + ++ P N ++A+ + V+D +K
Sbjct: 293 WDLRNLRMKLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWDLSK 341
Score = 428 (155.7 bits), Expect = 3.3e-40, P = 3.3e-40
Identities = 77/121 (63%), Positives = 100/121 (82%)
Query: 236 DYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEI 295
D++IHRLILGTHTSDEQNHLLI+ + +P +DAQFDAS YDT++ ++GGFG+V+GK+E +I
Sbjct: 56 DHTIHRLILGTHTSDEQNHLLISKICMPTDDAQFDASRYDTERSEYGGFGAVNGKVEPDI 115
Query: 296 KINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKE 355
+INHEGEVNRARYMPQ +IATK+P +DV +FDY KH + P N +P +RL+GH KE
Sbjct: 116 RINHEGEVNRARYMPQKSNIIATKSPHADVYIFDYLKHSAVPRDN-TFNPLIRLKGHTKE 174
Query: 356 G 356
G
Sbjct: 175 G 175
>UNIPROTKB|P90916 [details] [associations]
symbol:lin-53 "Probable histone-binding protein lin-53"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0042826 "histone deacetylase binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0009790
"embryo development" evidence=IMP] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0070176
"DRM complex" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=NAS] [GO:0017053
"transcriptional repressor complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0001708 GO:GO:0009792 GO:GO:0006915 GO:GO:0045892
GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0040035 GO:GO:0045138
GO:GO:0040027 GeneTree:ENSGT00570000079069 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0048557 HOGENOM:HOG000160330
EMBL:AF116530 EMBL:Z81097 EMBL:AL023833 PIR:T23391
RefSeq:NP_492552.1 UniGene:Cel.19610 ProteinModelPortal:P90916
SMR:P90916 IntAct:P90916 MINT:MINT-114323 STRING:P90916
PaxDb:P90916 EnsemblMetazoa:K07A1.12.1 EnsemblMetazoa:K07A1.12.2
GeneID:172802 KEGG:cel:CELE_K07A1.12 UCSC:K07A1.12.1 CTD:172802
WormBase:K07A1.12 InParanoid:P90916 OMA:DGFLLHV NextBio:877063
GO:GO:0070176 Uniprot:P90916
Length = 417
Score = 501 (181.4 bits), Expect = 6.0e-48, P = 6.0e-48
Identities = 128/349 (36%), Positives = 182/349 (52%)
Query: 8 DDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDAS 67
D E+RV N+EYKIWKKNTPFLYDLVMTHALEWPSL+ QWLPDV N D
Sbjct: 6 DGTSEDRVANDEYKIWKKNTPFLYDLVMTHALEWPSLSVQWLPDVAK---DNSDHTI--- 59
Query: 68 NYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKG--GNVQLPNEDAQFDAS-N 124
+ GTHTSDEQNHLLI+ + +P +DAQFDAS YDT++ G N + D N
Sbjct: 60 -HRLILGTHTSDEQNHLLISKICMPTDDAQFDASRYDTERSEYGGFGAVNGKVEPDIRIN 118
Query: 125 YDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDI---NATPKENRVIDAKTIFTGHTAVV 181
++ + + P + + + S + ++D +A P++N + GHT
Sbjct: 119 HEGEVNR--ARYMPQKSNIIATKSPHADVYIFDYLKHSAVPRDN-TFNPLIRLKGHT--- 172
Query: 182 EVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR 241
+ YGLSWNP+ G +LSASDD T+C WDINA + AK +F GH +VVED + H
Sbjct: 173 KEGYGLSWNPNKEGLILSASDDQTVCHWDINANQNVAGELQAKDVFKGHESVVEDVAWHV 232
Query: 242 LILGTHTS-DEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGF-------GSVSGKI-- 291
L G S + LLI V+ DA + + + F + GS +
Sbjct: 233 LHDGVFGSVGDDKKLLIWDVRTSTPGHCIDAHSAEVNCLAFNPYSEFILATGSADKTVAL 292
Query: 292 ----EIEIKIN----HEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332
+ +K++ H E+ + ++ P N ++A+ + V+D +K
Sbjct: 293 WDLRNLRMKLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWDLSK 341
Score = 428 (155.7 bits), Expect = 3.3e-40, P = 3.3e-40
Identities = 77/121 (63%), Positives = 100/121 (82%)
Query: 236 DYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEI 295
D++IHRLILGTHTSDEQNHLLI+ + +P +DAQFDAS YDT++ ++GGFG+V+GK+E +I
Sbjct: 56 DHTIHRLILGTHTSDEQNHLLISKICMPTDDAQFDASRYDTERSEYGGFGAVNGKVEPDI 115
Query: 296 KINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKE 355
+INHEGEVNRARYMPQ +IATK+P +DV +FDY KH + P N +P +RL+GH KE
Sbjct: 116 RINHEGEVNRARYMPQKSNIIATKSPHADVYIFDYLKHSAVPRDN-TFNPLIRLKGHTKE 174
Query: 356 G 356
G
Sbjct: 175 G 175
>UNIPROTKB|Q61Y48 [details] [associations]
symbol:lin-53 "Probable histone-binding protein lin-53"
species:6238 "Caenorhabditis briggsae" [GO:0005634 "nucleus"
evidence=ISS] [GO:0009790 "embryo development" evidence=ISS]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0040035 "hermaphrodite genitalia development"
evidence=ISS] [GO:0042826 "histone deacetylase binding"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0017053 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0040035 GO:GO:0042826
InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330 EMBL:HE600990
ProteinModelPortal:Q61Y48 SMR:Q61Y48 STRING:Q61Y48 PRIDE:Q61Y48
EnsemblMetazoa:CBG03710 WormBase:CBG03710 Uniprot:Q61Y48
Length = 416
Score = 494 (179.0 bits), Expect = 3.3e-47, P = 3.3e-47
Identities = 125/348 (35%), Positives = 183/348 (52%)
Query: 8 DDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDAS 67
D E+RV N+EYKIWKKNTPFLYDLVMTHALEWPSL+ QWLP++ E D +
Sbjct: 6 DGTSEDRVANDEYKIWKKNTPFLYDLVMTHALEWPSLSVQWLPEI-------EKESSDHT 58
Query: 68 NYDTDKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKG--GNVQLPNEDAQFDAS-N 124
+ GTHTSDEQNHLLI+ + +P ++AQFDAS YDT++G G N + D N
Sbjct: 59 VHRLILGTHTSDEQNHLLISKICMPTDEAQFDASRYDTERGEFGGFGAVNGKVEPDIRIN 118
Query: 125 YD--TDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVE 182
++ ++ Y + P++ ++D + + PK+N + GHT +
Sbjct: 119 HEGEVNRARY-MPQKPTIIATKSPSADVYIFDYTKYPSVPKDN-TFNPLLKLKGHT---K 173
Query: 183 VRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRL 242
YGLSWNP+ G +LSASDD T+C WDIN N + A+ IF GH +VVED + H L
Sbjct: 174 EGYGLSWNPNKEGLILSASDDQTVCHWDINGNAGANGELKAREIFKGHESVVEDVAWHVL 233
Query: 243 ILGTHTS-DEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGF-------GSVSGKI--- 291
G S + LLI ++ DA + + + F + GS +
Sbjct: 234 HDGVFGSVGDDKKLLIWDLRTNVPGHAIDAHSAEVNCLAFNPYSEFILATGSADKTVALW 293
Query: 292 ---EIEIKIN----HEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332
+ +K++ H E+ + ++ P N ++A+ + V+D +K
Sbjct: 294 DLRNLRLKLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWDLSK 341
Score = 458 (166.3 bits), Expect = 2.2e-43, P = 2.2e-43
Identities = 81/121 (66%), Positives = 105/121 (86%)
Query: 236 DYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEI 295
D+++HRLILGTHTSDEQNHLLI+ + +P ++AQFDAS YDT++G+FGGFG+V+GK+E +I
Sbjct: 56 DHTVHRLILGTHTSDEQNHLLISKICMPTDEAQFDASRYDTERGEFGGFGAVNGKVEPDI 115
Query: 296 KINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKE 355
+INHEGEVNRARYMPQ P +IATK+PS+DV +FDYTK+PS P N +P L+L+GH KE
Sbjct: 116 RINHEGEVNRARYMPQKPTIIATKSPSADVYIFDYTKYPSVPKDN-TFNPLLKLKGHTKE 174
Query: 356 G 356
G
Sbjct: 175 G 175
>TAIR|locus:2161253 [details] [associations]
symbol:MSI1 "MULTICOPY SUPRESSOR OF IRA1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0007275 "multicellular organismal development" evidence=IMP]
[GO:0016568 "chromatin modification" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0043234 "protein complex"
evidence=IPI] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009793
"embryo development ending in seed dormancy" evidence=IMP]
[GO:0031507 "heterochromatin assembly" evidence=RCA;IMP]
[GO:0009909 "regulation of flower development" evidence=RCA;IMP]
[GO:0008283 "cell proliferation" evidence=IMP] [GO:0010026
"trichome differentiation" evidence=IMP] [GO:0048366 "leaf
development" evidence=IMP] [GO:0010214 "seed coat development"
evidence=IMP] [GO:0048316 "seed development" evidence=IMP]
[GO:0009555 "pollen development" evidence=IGI;IMP] [GO:0045787
"positive regulation of cell cycle" evidence=IGI;RCA] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=ISS] [GO:0006349
"regulation of gene expression by genetic imprinting" evidence=IPI]
[GO:0006275 "regulation of DNA replication" evidence=RCA]
[GO:0009965 "leaf morphogenesis" evidence=RCA] [GO:0010389
"regulation of G2/M transition of mitotic cell cycle" evidence=RCA]
[GO:0016570 "histone modification" evidence=RCA] [GO:0048449
"floral organ formation" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009507 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0009555 GO:GO:0010214 GO:GO:0008283
GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 EMBL:AB019228 GO:GO:0009793 GO:GO:0009908
GO:GO:0048366 GO:GO:0009909 GO:GO:0006349 GO:GO:0016585
GO:GO:0045787 GO:GO:0031507 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0080008 GO:GO:0010026 HOGENOM:HOG000160330
OMA:DGFLLHV EMBL:AF016846 EMBL:AY059874 EMBL:AY114646
IPI:IPI00535841 RefSeq:NP_200631.1 UniGene:At.49185
UniGene:At.66738 ProteinModelPortal:O22467 SMR:O22467
DIP:DIP-33481N IntAct:O22467 STRING:O22467 PaxDb:O22467
PRIDE:O22467 EnsemblPlants:AT5G58230.1 GeneID:835935
KEGG:ath:AT5G58230 GeneFarm:2813 TAIR:At5g58230 InParanoid:O22467
PhylomeDB:O22467 ProtClustDB:CLSN2683757 Genevestigator:O22467
GermOnline:AT5G58230 Uniprot:O22467
Length = 424
Score = 438 (159.2 bits), Expect = 1.2e-45, Sum P(2) = 1.2e-45
Identities = 109/266 (40%), Positives = 153/266 (57%)
Query: 11 VEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYD 70
+EER+INEEYKIWKKNTPFLYDLV+THALEWPSLT +WLPD E + D S
Sbjct: 12 IEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPD------REEPSGKDYSVQK 65
Query: 71 TDKGTHTSD-EQNHLLIASVQLPNEDAQFDASNYDTDKG--GNVQLPNEDAQF-DASNYD 126
GTHTS+ E N+L++A VQLP +D + +A YD D+ G Q N+D
Sbjct: 66 MILGTHTSESEPNYLMLAQVQLPLDDTESEARQYDDDRSEFGGFGCATGKVQIIQQINHD 125
Query: 127 --TDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKE---NRVIDAKTIFTGHTAVV 181
++ Y + NP + + + + + + ++D + P + + + GH++
Sbjct: 126 GEVNRARY-MPQNPFI---IATKTVNAEVYVFDYSKHPSKPPLDGACNPDLKLRGHSSE- 180
Query: 182 EVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIH- 240
YGLSW+ G+LLS SDD ICLWDINATPK N+ +DA+ IF H VVED + H
Sbjct: 181 --GYGLSWSKFKQGHLLSGSDDAQICLWDINATPK-NKSLDAQQIFKAHEGVVEDVAWHL 237
Query: 241 --RLILGTHTSDEQNHLLIASVQLPN 264
+ G+ D+Q +LLI ++ P+
Sbjct: 238 RHEYLFGS-VGDDQ-YLLIWDLRSPS 261
Score = 421 (153.3 bits), Expect = 1.8e-39, P = 1.8e-39
Identities = 74/123 (60%), Positives = 100/123 (81%)
Query: 235 EDYSIHRLILGTHTSD-EQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEI 293
+DYS+ ++ILGTHTS+ E N+L++A VQLP +D + +A YD D+ +FGGFG +GK++I
Sbjct: 59 KDYSVQKMILGTHTSESEPNYLMLAQVQLPLDDTESEARQYDDDRSEFGGFGCATGKVQI 118
Query: 294 EIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQ 353
+INH+GEVNRARYMPQNP +IATKT +++V VFDY+KHPSKP +G C+PDL+LRGH
Sbjct: 119 IQQINHDGEVNRARYMPQNPFIIATKTVNAEVYVFDYSKHPSKPPLDGACNPDLKLRGHS 178
Query: 354 KEG 356
EG
Sbjct: 179 SEG 181
Score = 58 (25.5 bits), Expect = 1.2e-45, Sum P(2) = 1.2e-45
Identities = 15/47 (31%), Positives = 22/47 (46%)
Query: 286 SVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332
S S ++ + H EVN + P N V+AT + V +FD K
Sbjct: 259 SPSASKPVQSVVAHSMEVNCLAFNPFNEWVVATGSTDKTVKLFDLRK 305
Score = 41 (19.5 bits), Expect = 7.6e-44, Sum P(2) = 7.6e-44
Identities = 8/35 (22%), Positives = 21/35 (60%)
Query: 298 NHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332
+H+ EV + + P+N ++A+ ++V+D ++
Sbjct: 315 SHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSR 349
>DICTYBASE|DDB_G0282529 [details] [associations]
symbol:rbbD "putative Retinoblastoma (Rb) binding
protein" species:44689 "Dictyostelium discoideum" [GO:0016568
"chromatin modification" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0282529 GO:GO:0005634
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AAFI02000047 GenomeReviews:CM000152_GR
GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 KO:K10752 OMA:CQPDLRL
InterPro:IPR022052 Pfam:PF12265 RefSeq:XP_640105.1
ProteinModelPortal:Q54SD4 SMR:Q54SD4 STRING:Q54SD4 PRIDE:Q54SD4
EnsemblProtists:DDB0232003 GeneID:8623636 KEGG:ddi:DDB_G0282529
ProtClustDB:CLSZ2430461 Uniprot:Q54SD4
Length = 423
Score = 441 (160.3 bits), Expect = 1.4e-41, P = 1.4e-41
Identities = 119/349 (34%), Positives = 180/349 (51%)
Query: 11 VEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYD 70
VEE+VINEEYKIWK++TPFLYD+V+THALEWPSLT WLP TS PN+ +
Sbjct: 8 VEEKVINEEYKIWKRHTPFLYDMVITHALEWPSLTVAWLPVKTSQ--PNKPYSIEK---- 61
Query: 71 TDKGTHTSDE-QNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQFDASNYDTDK 129
GTHTSDE QN+L++A V LP ++A ++ YD KG + N + + +
Sbjct: 62 VILGTHTSDEEQNYLMVAKVHLPVDEASIESLKYDDTKGEVGGIGNVSEKIEIIQKINHE 121
Query: 130 GGYGLSW-NPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTI----FTGHTAVVEVR 184
G + P + + + + + ++D P E D K TGH +
Sbjct: 122 GEVNRARVMPQNHSIIATKTVSSEVYIFDTTKHPLEPTP-DGKCSPNLKLTGHK---KEG 177
Query: 185 YGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYS---IHR 241
YG+SWNP G+LLS SDD +IC+WDI+A K + +DA I+ GHT++VED + IH
Sbjct: 178 YGISWNPRKEGHLLSCSDDQSICMWDISAASKSDSTLDALNIYNGHTSIVEDVAWHYIHD 237
Query: 242 LILGTHTSDEQNHLLIASVQLPNEDAQF-DASNYDTDKGDFGGF-------GSVSGKIEI 293
G+ D++ L+I + + +A N + + F F GS + +
Sbjct: 238 TFFGSVGDDKK--LMIWDTRTGTKPIHVVEAHNSEVNCLSFNPFCEFLVATGSTDKTVAL 295
Query: 294 -EIK---------INHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332
+++ I+H EV + ++ P N V+A+ V V+D ++
Sbjct: 296 WDMRNLGNRLHSLISHTDEVFQVQFSPHNETVLASCGSDRRVNVWDLSR 344
Score = 396 (144.5 bits), Expect = 8.0e-37, P = 8.0e-37
Identities = 75/121 (61%), Positives = 95/121 (78%)
Query: 237 YSIHRLILGTHTSDE-QNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEI 295
YSI ++ILGTHTSDE QN+L++A V LP ++A ++ YD KG+ GG G+VS KIEI
Sbjct: 57 YSIEKVILGTHTSDEEQNYLMVAKVHLPVDEASIESLKYDDTKGEVGGIGNVSEKIEIIQ 116
Query: 296 KINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKE 355
KINHEGEVNRAR MPQN +IATKT SS+V +FD TKHP +P P+G+C P+L+L GH+KE
Sbjct: 117 KINHEGEVNRARVMPQNHSIIATKTVSSEVYIFDTTKHPLEPTPDGKCSPNLKLTGHKKE 176
Query: 356 G 356
G
Sbjct: 177 G 177
>POMBASE|SPCC1672.10 [details] [associations]
symbol:mis16 "kinetochore protein Mis16" species:4896
"Schizosaccharomyces pombe" [GO:0000070 "mitotic sister chromatid
segregation" evidence=IMP] [GO:0000778 "condensed nuclear
chromosome kinetochore" evidence=IDA] [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006995 "cellular response to nitrogen starvation"
evidence=IMP] [GO:0016575 "histone deacetylation" evidence=IMP]
[GO:0031055 "chromatin remodeling at centromere" evidence=IMP]
[GO:0031066 "regulation of histone deacetylation at centromere"
evidence=IMP] [GO:0031511 "Mis6-Sim4 complex" evidence=TAS]
[GO:0034501 "protein localization to kinetochore" evidence=IMP]
[GO:0051382 "kinetochore assembly" evidence=TAS] [GO:0070317
"negative regulation of G0 to G1 transition" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPCC1672.10 GO:GO:0005829 GO:GO:0070317 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0006281 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000790 GO:GO:0000070
GO:GO:0000778 GO:GO:0034501 GO:GO:0006995 GO:GO:0051382
GO:GO:0016575 KO:K10752 InterPro:IPR022052 Pfam:PF12265 PIR:T41054
RefSeq:NP_587881.1 ProteinModelPortal:O94244 SMR:O94244
IntAct:O94244 STRING:O94244 PRIDE:O94244 EnsemblFungi:SPCC1672.10.1
GeneID:2539214 KEGG:spo:SPCC1672.10 HOGENOM:HOG000160330
OMA:NSCIIAT OrthoDB:EOG412QFD NextBio:20800384 GO:GO:0031511
GO:GO:0031055 GO:GO:0031066 Uniprot:O94244
Length = 430
Score = 333 (122.3 bits), Expect = 2.4e-33, Sum P(2) = 2.4e-33
Identities = 96/266 (36%), Positives = 134/266 (50%)
Query: 13 ERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTD 72
++ I EEYK+WK+N PFLYDLV+THALEWPSLT QWLPD ++ P D
Sbjct: 23 QKTIQEEYKLWKQNVPFLYDLVITHALEWPSLTIQWLPDKKTI--PGTDYSIQRLIL--- 77
Query: 73 KGTHTS-DEQNHLLIASVQLPN--EDA-QFDASNYDTDKG-GNVQLPNEDAQFDASNYDT 127
GTHTS ++QN+L IASVQLPN ED +F S + G+ + E +Q + D
Sbjct: 78 -GTHTSGNDQNYLQIASVQLPNFDEDTTEFTPSTIRRAQATGSYTI--EISQKIPHDGDV 134
Query: 128 DKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGL 187
++ Y + P + + + + +A + A + GHTA +GL
Sbjct: 135 NRARY-MPQKPEIIATMGEGGNAYIFDTTCHDALTTGEALPQA--VLKGHTAE---GFGL 188
Query: 188 SWNPSLNGYLLSASDDHTICLWDINA---TPKENRVIDAKTIFTGHTAVVEDYSIH--RL 242
WNP+L G L + ++D ICLWD+ T E +VI + HT +V D H
Sbjct: 189 CWNPNLPGNLATGAEDQVICLWDVQTQSFTSSETKVISPIAKYHRHTDIVNDVQFHPQHE 248
Query: 243 ILGTHTSDEQNHLLIASVQL-PNEDA 267
L SD+ L I +L P E+A
Sbjct: 249 ALLASVSDDCT-LQIHDTRLNPEEEA 273
Score = 241 (89.9 bits), Expect = 2.7e-18, P = 2.7e-18
Identities = 60/122 (49%), Positives = 73/122 (59%)
Query: 236 DYSIHRLILGTHTS-DEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIE 294
DYSI RLILGTHTS ++QN+L IASVQLPN D D + + T + S IEI
Sbjct: 69 DYSIQRLILGTHTSGNDQNYLQIASVQLPNFDE--DTTEF-TPSTIRRAQATGSYTIEIS 125
Query: 295 IKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQK 354
KI H+G+VNRARYMPQ P +IAT + +FD T H + GE P L+GH
Sbjct: 126 QKIPHDGDVNRARYMPQKPEIIATMGEGGNAYIFDTTCHDALT--TGEALPQAVLKGHTA 183
Query: 355 EG 356
EG
Sbjct: 184 EG 185
Score = 125 (49.1 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 41/125 (32%), Positives = 60/125 (48%)
Query: 137 NPSLNGYLLS-ASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNG 195
NP N YLL+ AS D T+ LWD+ P + T+ GH V YGL W+P
Sbjct: 290 NP-FNDYLLATASADKTVALWDLR-NPYQR----LHTL-EGHEDEV---YGLEWSPHDEP 339
Query: 196 YLLSASDDHTICLWDINATPKENRVIDAKT-----IFT--GHTAVVEDYSI---HRLILG 245
L S+S D +C+WD+ +E DA+ +F GHT + ++S R ++G
Sbjct: 340 ILASSSTDRRVCIWDLEKIGEEQTPEDAEDGSPELLFMHGGHTNRISEFSWCPNERWVVG 399
Query: 246 THTSD 250
+ D
Sbjct: 400 SLADD 404
Score = 46 (21.3 bits), Expect = 2.4e-33, Sum P(2) = 2.4e-33
Identities = 12/51 (23%), Positives = 23/51 (45%)
Query: 299 HEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK--HPSKPDPNGECHPDL 347
HE EV + P + ++A+ + V ++D K P+ + P+L
Sbjct: 324 HEDEVYGLEWSPHDEPILASSSTDRRVCIWDLEKIGEEQTPEDAEDGSPEL 374
Score = 39 (18.8 bits), Expect = 1.3e-32, Sum P(2) = 1.3e-32
Identities = 12/48 (25%), Positives = 21/48 (43%)
Query: 299 HEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPD 346
H +N P N ++AT + V ++D ++P + E H D
Sbjct: 280 HSKAINAVAINPFNDYLLATASADKTVALWDL-RNPYQRLHTLEGHED 326
>WB|WBGene00004312 [details] [associations]
symbol:rba-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0001703 "gastrulation with
mouth forming first" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0016246 "RNA interference" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0045138 "tail tip
morphogenesis" evidence=IMP] [GO:0001708 "cell fate specification"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0001708 GO:GO:0009792 GO:GO:0006915
GO:GO:0016246 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0006351
GO:GO:0016568 GO:GO:0040035 GO:GO:0045138
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0001703 HOGENOM:HOG000160330 EMBL:Z81097
OMA:MPDVTKT PIR:T23385 RefSeq:NP_492551.1 ProteinModelPortal:P90917
SMR:P90917 STRING:P90917 PaxDb:P90917 EnsemblMetazoa:K07A1.11.1
EnsemblMetazoa:K07A1.11.2 GeneID:172801 KEGG:cel:CELE_K07A1.11
UCSC:K07A1.11 CTD:172801 WormBase:K07A1.11 InParanoid:P90917
NextBio:877059 Uniprot:P90917
Length = 412
Score = 331 (121.6 bits), Expect = 6.2e-30, P = 6.2e-30
Identities = 63/123 (51%), Positives = 87/123 (70%)
Query: 236 DYSIHRLILGTHT-SDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSG-KIEI 293
D S+HR+I GTHT QNHL+I+ + + +FD + +D+++ +FGG+G S K +
Sbjct: 53 DSSMHRMIHGTHTCGGVQNHLMISKFTITTDTPEFDDAKWDSEREEFGGYGEGSAAKWDT 112
Query: 294 EIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQ 353
EIKINH GEV+RARYMP NP +IA++ PS DV +FDYTKHPS+P + P LRL+GH+
Sbjct: 113 EIKINHPGEVHRARYMPHNPFIIASRGPSDDVYIFDYTKHPSEPKDT-KFRPQLRLKGHE 171
Query: 354 KEG 356
EG
Sbjct: 172 GEG 174
Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
Identities = 99/346 (28%), Positives = 165/346 (47%)
Query: 17 NEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTH 76
++E++IWKKN P+LYD V+T +EWPSL+ QW+PDVT + N D+ S + GTH
Sbjct: 11 SKEHRIWKKNVPYLYDTVVTKEVEWPSLSVQWMPDVTKTE--NSDS----SMHRMIHGTH 64
Query: 77 T-SDEQNHLLIASVQLPNEDAQFDASNYDTDK---GGNVQLPNEDAQFDASNYDTDKGG- 131
T QNHL+I+ + + +FD + +D+++ GG + A++D G
Sbjct: 65 TCGGVQNHLMISKFTITTDTPEFDDAKWDSEREEFGGYGE--GSAAKWDTEIKINHPGEV 122
Query: 132 YGLSWNPSLNGYLLSA---SDDHTICLWDINATPKENRVIDAK----TIFTGHTAVVEVR 184
+ + P N +++++ SDD + ++D P E + D K GH
Sbjct: 123 HRARYMPH-NPFIIASRGPSDD--VYIFDYTKHPSEPK--DTKFRPQLRLKGHEGE---G 174
Query: 185 YGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRL-- 242
YG+SW+ + G+LL+A DD IC WDINA + I ++ F GH++ ED S H L
Sbjct: 175 YGMSWSNTREGHLLTAGDDGMICHWDINANQTISGQIVPQSKFKGHSSNAEDVSFHALHN 234
Query: 243 -ILGTHTSDEQNHLLIASVQLPN-----EDAQFDASNYDTDKGDFGGFGSVSGKIEI--- 293
+ G+ D + +L P A+ + ++ GSV + +
Sbjct: 235 FVFGSVGDDRKLNLWDLRQSKPQLTAVGHTAEVNCITFNPFSEYILATGSVDKTVALWDM 294
Query: 294 ---EIKI----NHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332
K+ +H E+ + + P V+A+ V+V+D +K
Sbjct: 295 RNMRKKMYTLKHHNDEIFQVSFSPHYETVLASSGSDDRVIVWDISK 340
>TAIR|locus:2059856 [details] [associations]
symbol:MSI2 "AT2G16780" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0000911
"cytokinesis by cell plate formation" evidence=RCA] [GO:0006260
"DNA replication" evidence=RCA] [GO:0006306 "DNA methylation"
evidence=RCA] [GO:0007067 "mitosis" evidence=RCA] [GO:0007129
"synapsis" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0008283 "cell proliferation"
evidence=RCA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] [GO:0010564 "regulation of cell cycle process"
evidence=RCA] [GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 EMBL:AC005825 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000160330
ProtClustDB:CLSN2683757 EMBL:AF016847 EMBL:AY056814 IPI:IPI00526379
PIR:B84544 RefSeq:NP_179269.1 UniGene:At.25135
ProteinModelPortal:O22468 SMR:O22468 STRING:O22468 PaxDb:O22468
PRIDE:O22468 EnsemblPlants:AT2G16780.1 GeneID:816179
KEGG:ath:AT2G16780 GeneFarm:2815 TAIR:At2g16780 InParanoid:O22468
OMA:EVNYLSF PhylomeDB:O22468 Genevestigator:O22468
GermOnline:AT2G16780 Uniprot:O22468
Length = 415
Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 97/341 (28%), Positives = 160/341 (46%)
Query: 16 INEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGT 75
+ E++ +WKKNTPFLYDL+++H LEWPSLT W+P + + D+ F + GT
Sbjct: 14 VEEDFSVWKKNTPFLYDLLISHPLEWPSLTVHWVPSTPNPYVA--DSYFGV--HKLILGT 69
Query: 76 HTSDE-QNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPN-EDAQFDASNYDTDKGGYG 133
HTS Q+ L++A V P +A+ + D +P E Q + + ++
Sbjct: 70 HTSGSAQDFLMVADVVTPTPNAEPGIGGANQDPF----IPKVEIRQRIRVDGEVNRARC- 124
Query: 134 LSWNPSLNGYLLSASDDHTICLWDI--NATPKENRVIDAKTIFTGHTAVVEVRYGLSWNP 191
+ P+L G S + + L+D +A + D GH + YGLSW+P
Sbjct: 125 MPQKPTLVGAKTSGCE---VFLFDYAKHAAKSQTSECDPDLRLVGHD---KEGYGLSWSP 178
Query: 192 SLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRL---ILGTHT 248
GYLLS S D ICLWD++ATP++ +V++A ++ GH + + D S H + G+
Sbjct: 179 FKEGYLLSGSQDQKICLWDVSATPQD-KVLNAMFVYEGHESAIADVSWHMKNENLFGS-- 235
Query: 249 SDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFG-----SVSGKIEIEI----KIN- 298
+ E L+I + Q + + F F + S + + K+N
Sbjct: 236 AGEDGRLVIWDTRTNQMQHQVKVHEREVNYLSFNPFNEWVLATASSDSTVALFDLRKLNA 295
Query: 299 -------HEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332
HEGEV + + P + V+A+ ++V+D +
Sbjct: 296 PLHVMSSHEGEVFQVEWDPNHETVLASSGEDRRLMVWDLNR 336
Score = 236 (88.1 bits), Expect = 9.9e-18, P = 9.9e-18
Identities = 55/131 (41%), Positives = 74/131 (56%)
Query: 228 TGHTAVVEDY-SIHRLILGTHTSDE-QNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFG 285
T + V + Y +H+LILGTHTS Q+ L++A V P +A+ + D
Sbjct: 50 TPNPYVADSYFGVHKLILGTHTSGSAQDFLMVADVVTPTPNAEPGIGGANQDP------- 102
Query: 286 SVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHP 345
K+EI +I +GEVNRAR MPQ P ++ KT +V +FDY KH +K + EC P
Sbjct: 103 -FIPKVEIRQRIRVDGEVNRARCMPQKPTLVGAKTSGCEVFLFDYAKHAAKSQTS-ECDP 160
Query: 346 DLRLRGHQKEG 356
DLRL GH KEG
Sbjct: 161 DLRLVGHDKEG 171
>TAIR|locus:2131551 [details] [associations]
symbol:MSI3 "MULTICOPY SUPPRESSOR OF IRA1 3" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0005515 "protein binding" evidence=IPI] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=IPI] [GO:0000278 "mitotic cell
cycle" evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0006406 "mRNA export from nucleus" evidence=RCA] [GO:0006606
"protein import into nucleus" evidence=RCA] [GO:0009560 "embryo sac
egg cell differentiation" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010074 "maintenance of meristem
identity" evidence=RCA] [GO:0010162 "seed dormancy process"
evidence=RCA] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0016567 "protein
ubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0050826 "response to freezing" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 EMBL:AL022023 EMBL:AL161586 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000160330
OMA:VLYDLVI ProtClustDB:CLSN2683757 EMBL:AF016848 IPI:IPI00525720
PIR:T05775 RefSeq:NP_195231.1 UniGene:At.2099
ProteinModelPortal:O22469 SMR:O22469 IntAct:O22469 STRING:O22469
PaxDb:O22469 PRIDE:O22469 EnsemblPlants:AT4G35050.1 GeneID:829657
KEGG:ath:AT4G35050 GeneFarm:2817 TAIR:At4g35050 InParanoid:O22469
PhylomeDB:O22469 Genevestigator:O22469 GermOnline:AT4G35050
Uniprot:O22469
Length = 424
Score = 309 (113.8 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 99/348 (28%), Positives = 166/348 (47%)
Query: 8 DDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLP-NEDAQFDA 66
D+A ++V EE+ IWK+NTPFLYDL+++H LEWPSLT W+P S +P ++D F
Sbjct: 8 DEAGLDQV-EEEFSIWKRNTPFLYDLMISHPLEWPSLTLHWVP---STPIPYSKDPYFAV 63
Query: 67 SNYDTDKGTHTSD-EQNHLLIASVQLPNEDAQFDASNYDTDK-GGNVQLPNEDAQFDASN 124
+ GTHTS Q+ L++A V +P DA+ D + V++ + + D
Sbjct: 64 --HKLILGTHTSGGAQDFLMVADVVIPTPDAEPGLGGRDQEPIVPKVEI-KQKIRVDG-- 118
Query: 125 YDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVR 184
+ ++ + P+L G S S+ ++ P+ + D GH +
Sbjct: 119 -EVNRARC-MPQKPTLVGAKTSGSEVFLFDYARLSGKPQTSEC-DPDLRLMGHE---QEG 172
Query: 185 YGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRL-- 242
YGL+W+ GYLLS S D ICLWD++AT + +V++ ++ GH +++ED + H
Sbjct: 173 YGLAWSSFKEGYLLSGSQDQRICLWDVSATATD-KVLNPMHVYEGHQSIIEDVAWHMKNE 231
Query: 243 -ILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFG-----SVSG------- 289
I G+ D Q L+I ++ Q + + F F + S
Sbjct: 232 NIFGSAGDDCQ--LVIWDLRTNQMQHQVKVHEREINYLSFNPFNEWVLATASSDSTVALF 289
Query: 290 ---KIEIEIKI--NHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332
K+ + + HEGEV + + P + V+A+ ++V+D +
Sbjct: 290 DLRKLTAPLHVLSKHEGEVFQVEWDPNHETVLASSGEDRRLMVWDINR 337
Score = 249 (92.7 bits), Expect = 2.3e-19, P = 2.3e-19
Identities = 53/121 (43%), Positives = 75/121 (61%)
Query: 237 YSIHRLILGTHTSD-EQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEI 295
+++H+LILGTHTS Q+ L++A V +P DA+ D + + K+EI+
Sbjct: 61 FAVHKLILGTHTSGGAQDFLMVADVVIPTPDAEPGLGGRDQEP--------IVPKVEIKQ 112
Query: 296 KINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKE 355
KI +GEVNRAR MPQ P ++ KT S+V +FDY + KP + EC PDLRL GH++E
Sbjct: 113 KIRVDGEVNRARCMPQKPTLVGAKTSGSEVFLFDYARLSGKPQTS-ECDPDLRLMGHEQE 171
Query: 356 G 356
G
Sbjct: 172 G 172
>UNIPROTKB|C9JPP3 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] GO:GO:0016581 InterPro:IPR022052
Pfam:PF12265 HOGENOM:HOG000160330 EMBL:AC114489 HGNC:HGNC:9887
ChiTaRS:RBBP4 IPI:IPI00974561 ProteinModelPortal:C9JPP3 SMR:C9JPP3
STRING:C9JPP3 Ensembl:ENST00000445722 ArrayExpress:C9JPP3
Bgee:C9JPP3 Uniprot:C9JPP3
Length = 87
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 55/64 (85%), Positives = 64/64 (100%)
Query: 235 EDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIE 294
+D+SIHRL+LGTHTSDEQNHL+IASVQLPN+DAQFDAS+YD++KG+FGGFGSVSGKIEIE
Sbjct: 24 KDFSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIE 83
Query: 295 IKIN 298
IKIN
Sbjct: 84 IKIN 87
Score = 251 (93.4 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 53/74 (71%), Positives = 59/74 (79%)
Query: 35 MTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNE 94
MTHALEWPSLTAQWLPDVT P E F S + GTHTSDEQNHL+IASVQLPN+
Sbjct: 1 MTHALEWPSLTAQWLPDVTR---P-EGKDF--SIHRLVLGTHTSDEQNHLVIASVQLPND 54
Query: 95 DAQFDASNYDTDKG 108
DAQFDAS+YD++KG
Sbjct: 55 DAQFDASHYDSEKG 68
Score = 99 (39.9 bits), Expect = 0.00017, P = 0.00017
Identities = 17/24 (70%), Positives = 23/24 (95%)
Query: 110 NVQLPNEDAQFDASNYDTDKGGYG 133
+VQLPN+DAQFDAS+YD++KG +G
Sbjct: 48 SVQLPNDDAQFDASHYDSEKGEFG 71
>UNIPROTKB|E9PND5 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] GO:GO:0016581 InterPro:IPR022052
Pfam:PF12265 EMBL:AC114489 HGNC:HGNC:9887 ChiTaRS:RBBP4
IPI:IPI00979287 ProteinModelPortal:E9PND5 SMR:E9PND5
Ensembl:ENST00000490500 ArrayExpress:E9PND5 Bgee:E9PND5
Uniprot:E9PND5
Length = 68
Score = 251 (93.4 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 53/74 (71%), Positives = 59/74 (79%)
Query: 35 MTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNE 94
MTHALEWPSLTAQWLPDVT P E F S + GTHTSDEQNHL+IASVQLPN+
Sbjct: 1 MTHALEWPSLTAQWLPDVTR---P-EGKDF--SIHRLVLGTHTSDEQNHLVIASVQLPND 54
Query: 95 DAQFDASNYDTDKG 108
DAQFDAS+YD++KG
Sbjct: 55 DAQFDASHYDSEKG 68
Score = 208 (78.3 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 37/45 (82%), Positives = 45/45 (100%)
Query: 235 EDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKG 279
+D+SIHRL+LGTHTSDEQNHL+IASVQLPN+DAQFDAS+YD++KG
Sbjct: 24 KDFSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKG 68
Score = 92 (37.4 bits), Expect = 0.00096, P = 0.00096
Identities = 16/21 (76%), Positives = 21/21 (100%)
Query: 110 NVQLPNEDAQFDASNYDTDKG 130
+VQLPN+DAQFDAS+YD++KG
Sbjct: 48 SVQLPNDDAQFDASHYDSEKG 68
>ASPGD|ASPL0000017699 [details] [associations]
symbol:AN8187 species:162425 "Emericella nidulans"
[GO:0000778 "condensed nuclear chromosome kinetochore"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0000070 "mitotic sister chromatid segregation"
evidence=IEA] [GO:0006995 "cellular response to nitrogen
starvation" evidence=IEA] [GO:0034501 "protein localization to
kinetochore" evidence=IEA] [GO:0031055 "chromatin remodeling at
centromere" evidence=IEA] [GO:0070317 "negative regulation of G0 to
G1 transition" evidence=IEA] [GO:0016575 "histone deacetylation"
evidence=IEA] [GO:0031066 "regulation of histone deacetylation at
centromere" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001302 OMA:CQPDLRL InterPro:IPR022052
Pfam:PF12265 EnsemblFungi:CADANIAT00004230 Uniprot:C8V748
Length = 411
Score = 258 (95.9 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 95/357 (26%), Positives = 159/357 (44%)
Query: 8 DDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDAS 67
++ EE++INEEYK WKKN PFLYD++++ ALEWP+LT QWLPD +DA D
Sbjct: 17 EERTEEKIINEEYKTWKKNAPFLYDMILSTALEWPTLTTQWLPD-------KQDAS-DKP 68
Query: 68 NYDTDK---GTHTS-DEQNHLLIASVQLPNEDAQFDASNYDTDKG--GNVQLPNEDAQFD 121
Y T + GTHTS D QN+L IA VQLPN +A + +YD ++G G ++ A +
Sbjct: 69 -YSTHRLLLGTHTSSDAQNYLQIAQVQLPNPNAP-NPDDYDEERGEIGGYGGSSKKAPME 126
Query: 122 ASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPK-ENRVIDAKTIFTGHTAV 180
+ K + G + A + +WD + ++ + GH
Sbjct: 127 INFKIVQKIDH--------KGEVNKAR----VMIWDRSKHQSVPTGTVNPQMELLGHK-- 172
Query: 181 VEVRYGLSWNPSLNGYLLSASD------------------DHTICLWDINATPKENRVID 222
+ +GLSW+P + G+L + D H+ + D+ P + +I
Sbjct: 173 -QEGFGLSWSPHVAGHLATGRDLTTYTKNNKALQPVRTYTHHSSIVNDVQHHPLHSSLIG 231
Query: 223 AKTIFTGHTAVVEDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFG 282
T+ T + D + T++ Q+ I ++ N A+ + DK G
Sbjct: 232 --TVSDDITLQILDTRVAETTRAAATAEGQHRDAINAIAF-NPAAETVLATGSADK-TIG 287
Query: 283 GFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDP 339
+ + K ++ NH V + P V+A+ + ++ +D ++ + P
Sbjct: 288 LWDLRNLKTKLHTLENHTDSVTSISWHPFEEAVLASASYDRKIMFWDLSRAGEEQTP 344
Score = 218 (81.8 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 55/127 (43%), Positives = 76/127 (59%)
Query: 237 YSIHRLILGTHTS-DEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEI 295
YS HRL+LGTHTS D QN+L IA VQLPN +A + +YD ++G+ GG+G S K +EI
Sbjct: 69 YSTHRLLLGTHTSSDAQNYLQIAQVQLPNPNAP-NPDDYDEERGEIGGYGGSSKKAPMEI 127
Query: 296 ------KINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRL 349
KI+H+GEVN+AR V+++D +KH S P G +P + L
Sbjct: 128 NFKIVQKIDHKGEVNKAR-----------------VMIWDRSKHQSVP--TGTVNPQMEL 168
Query: 350 RGHQKEG 356
GH++EG
Sbjct: 169 LGHKQEG 175
>UNIPROTKB|C9J7L0 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9606
"Homo sapiens" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] GO:GO:0005634 GO:GO:0000122
InterPro:IPR022052 Pfam:PF12265 EMBL:AL929302 HGNC:HGNC:9890
ChiTaRS:RBBP7 IPI:IPI00947544 ProteinModelPortal:C9J7L0 SMR:C9J7L0
STRING:C9J7L0 Ensembl:ENST00000468092 ArrayExpress:C9J7L0
Bgee:C9J7L0 Uniprot:C9J7L0
Length = 68
Score = 217 (81.4 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 44/74 (59%), Positives = 54/74 (72%)
Query: 35 MTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSDEQNHLLIASVQLPNE 94
MTHAL+WPSLT QWLP+VT P D + + GTHTSDEQNHL++A V +PN+
Sbjct: 1 MTHALQWPSLTVQWLPEVTK---PEGK---DYALHWLVLGTHTSDEQNHLVVARVHIPND 54
Query: 95 DAQFDASNYDTDKG 108
DAQFDAS+ D+DKG
Sbjct: 55 DAQFDASHCDSDKG 68
Score = 181 (68.8 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 31/45 (68%), Positives = 41/45 (91%)
Query: 235 EDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKG 279
+DY++H L+LGTHTSDEQNHL++A V +PN+DAQFDAS+ D+DKG
Sbjct: 24 KDYALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKG 68
>POMBASE|SPAC29A4.18 [details] [associations]
symbol:prw1 "Clr6 histone deacetylase complex subunit
Prw1" species:4896 "Schizosaccharomyces pombe" [GO:0000070 "mitotic
sister chromatid segregation" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006338 "chromatin
remodeling" evidence=IC] [GO:0006342 "chromatin silencing"
evidence=ISO] [GO:0016575 "histone deacetylation" evidence=IMP]
[GO:0030261 "chromosome condensation" evidence=IMP] [GO:0032221
"Rpd3S complex" evidence=IDA] [GO:0033698 "Rpd3L complex"
evidence=IDA] [GO:0070210 "Rpd3L-Expanded complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPAC29A4.18 GO:GO:0005829 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338
GO:GO:0000070 GO:GO:0006342 GO:GO:0030261 GO:GO:0033698
GO:GO:0070210 GO:GO:0016575 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0032221 HOGENOM:HOG000160330 PIR:T38471
RefSeq:NP_594864.1 ProteinModelPortal:O14021 DIP:DIP-29342N
IntAct:O14021 STRING:O14021 EnsemblFungi:SPAC29A4.18.1
GeneID:2541804 KEGG:spo:SPAC29A4.18 OMA:HISSHEK OrthoDB:EOG4MWCH4
NextBio:20802892 Uniprot:O14021
Length = 431
Score = 217 (81.4 bits), Expect = 2.4e-16, Sum P(2) = 2.4e-16
Identities = 66/236 (27%), Positives = 106/236 (44%)
Query: 12 EERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDT 71
+E+ INEEYKIWKKN+PFLYDL++T ALEWP ++ QW P+ Q+ E + +
Sbjct: 22 QEKCINEEYKIWKKNSPFLYDLIITRALEWPCMSLQWYPEQ---QIFAEHGYTEQKMF-- 76
Query: 72 DKGTHTSDEQNHLL-IASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQFDASN-YDTDK 129
G +D +LL +AS+QLP + + + G+ + + SN Y +
Sbjct: 77 -LGVR-ADVGKYLLAVASIQLPYLNQTVPPTTMEGASAGD----ESSLRVNISNLYSHPE 130
Query: 130 GGYGLSWNPSLNGYLLSASDDHT-ICLWDINATPKENRVIDA----KTIFTGHTAVVEVR 184
P + + + + H + ++D + + ++ K T HT
Sbjct: 131 SVCSAKLMPQDDSCVATVGNYHNDVLVFDKESFESYSSASESPLKPKYRLTKHTQPCT-- 188
Query: 185 YGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIH 240
+ WN G L+S S D T+ WD+NA + + K + H V D H
Sbjct: 189 -SVCWNFLSKGTLVSGSQDATLSCWDLNAYNESDSASVLKVHISSHEKQVSDVRFH 243
Score = 46 (21.3 bits), Expect = 2.4e-16, Sum P(2) = 2.4e-16
Identities = 7/31 (22%), Positives = 16/31 (51%)
Query: 299 HEGEVNRARYMPQNPCVIATKTPSSDVLVFD 329
H G ++ + P N ++AT + + ++D
Sbjct: 280 HSGPIHSVAFNPHNDFILATCSTDKTIALWD 310
Score = 41 (19.5 bits), Expect = 7.8e-16, Sum P(2) = 7.8e-16
Identities = 8/34 (23%), Positives = 17/34 (50%)
Query: 299 HEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTK 332
HE V + + P ++A+ + LV+D ++
Sbjct: 324 HEDIVTKISFSPHEEPILASTSADRRTLVWDLSR 357
>POMBASE|SPAC25H1.06 [details] [associations]
symbol:pcf3 "CAF assembly factor (CAF-1) complex subunit
C, Pcf3" species:4896 "Schizosaccharomyces pombe" [GO:0000790
"nuclear chromatin" evidence=IC] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006335 "DNA replication-dependent nucleosome assembly"
evidence=IC] [GO:0033186 "CAF-1 complex" evidence=IDA] [GO:0035067
"negative regulation of histone acetylation" evidence=IMP]
[GO:0043596 "nuclear replication fork" evidence=IDA] [GO:0051574
"positive regulation of histone H3-K9 methylation" evidence=IMP]
[GO:0070829 "heterochromatin maintenance" evidence=IMP] [GO:0090053
"positive regulation of chromatin silencing at centromere"
evidence=IMP] [GO:0090055 "positive regulation of chromatin
silencing at silent mating-type cassette" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPAC25H1.06 GO:GO:0005829 EMBL:CU329670 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 GO:GO:0000790
GO:GO:0043596 GO:GO:0006335 GO:GO:0035067 GO:GO:0051574
GO:GO:0033186 KO:K10752 InterPro:IPR022052 Pfam:PF12265
GO:GO:0090055 HOGENOM:HOG000160330 OrthoDB:EOG44TSHP GO:GO:0070829
GO:GO:0090053 PIR:T38386 RefSeq:NP_593810.1
ProteinModelPortal:Q9Y825 STRING:Q9Y825 EnsemblFungi:SPAC25H1.06.1
GeneID:2541656 KEGG:spo:SPAC25H1.06 OMA:MESITEK NextBio:20802749
Uniprot:Q9Y825
Length = 408
Score = 217 (81.4 bits), Expect = 1.8e-15, P = 1.8e-15
Identities = 49/121 (40%), Positives = 72/121 (59%)
Query: 240 HRLILGTHTSDEQ-NHLLIASVQLP--NEDAQFDASNYDTDKGDFGGFGSV-SGKIEIEI 295
+RL+LGTH ++ N L +A + LP N+ +Y+ D G+ GG+ S K +I
Sbjct: 67 NRLLLGTHAAEGMPNFLQLADLDLPDFNQTILDPVKHYNEDTGELGGYSMQHSCKFQISQ 126
Query: 296 KINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKE 355
+I H G+VNR R+MPQNP +IAT + + +FD TK+ S P E P++ L GH+KE
Sbjct: 127 RILHNGDVNRVRHMPQNPNIIATMSSCGNAYIFDRTKYTSMPAE--EFLPNISLIGHKKE 184
Query: 356 G 356
G
Sbjct: 185 G 185
Score = 190 (71.9 bits), Expect = 2.7e-12, P = 2.7e-12
Identities = 65/238 (27%), Positives = 108/238 (45%)
Query: 13 ERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTD 72
E I+E++ WKKN+ LY+L++T L WPSL+ QWL + S+ E A
Sbjct: 17 ENQISEDHFRWKKNSKHLYNLLITRTLTWPSLSIQWLSAMESI---TEKAVLKNRLL--- 70
Query: 73 KGTHTSDEQ-NHLLIASVQLP--NEDAQFDASNYDTDKG--GNVQLPNEDAQFDAS---- 123
GTH ++ N L +A + LP N+ +Y+ D G G + + +F S
Sbjct: 71 LGTHAAEGMPNFLQLADLDLPDFNQTILDPVKHYNEDTGELGGYSMQHS-CKFQISQRIL 129
Query: 124 -NYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVE 182
N D ++ + + NP++ + S + + + P E + + I GH +
Sbjct: 130 HNGDVNRVRH-MPQNPNIIATMSSCGNAYIFDRTKYTSMPAEEFLPNISLI--GHK---K 183
Query: 183 VRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIH 240
+GLSWN N L++A++D I WD+N ++ R + F + V D H
Sbjct: 184 EGFGLSWNRQQNCRLVTAANDSKILEWDLNNFSRDTRCLTPVKDFHYDDSPVNDVEYH 241
>SGD|S000000782 [details] [associations]
symbol:HAT2 "Subunit of the Hat1p-Hat2p histone
acetyltransferase complex" species:4932 "Saccharomyces cerevisiae"
[GO:0042393 "histone binding" evidence=IDA] [GO:0000123 "histone
acetyltransferase complex" evidence=IDA;IPI] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0006333 "chromatin assembly or disassembly"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0004402
"histone acetyltransferase activity" evidence=IDA;IMP;IPI]
[GO:0016573 "histone acetylation" evidence=IDA;IMP] [GO:0006348
"chromatin silencing at telomere" evidence=IGI] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000000782 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006281
eggNOG:COG2319 GO:GO:0016573 EMBL:BK006939 GO:GO:0006333
GO:GO:0006348 EMBL:U18795 GO:GO:0042393
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0000123 HOGENOM:HOG000160330 OrthoDB:EOG412QFD
PIR:S50533 RefSeq:NP_010858.3 RefSeq:NP_010861.3
ProteinModelPortal:P39984 SMR:P39984 DIP:DIP-2363N IntAct:P39984
MINT:MINT-654148 STRING:P39984 PaxDb:P39984 PeptideAtlas:P39984
EnsemblFungi:YEL056W GeneID:856654 GeneID:856657 KEGG:sce:YEL053C
KEGG:sce:YEL056W CYGD:YEL056w OMA:VLYDLVI NextBio:982637
Genevestigator:P39984 GermOnline:YEL056W Uniprot:P39984
Length = 401
Score = 211 (79.3 bits), Expect = 8.9e-15, P = 8.9e-15
Identities = 63/204 (30%), Positives = 98/204 (48%)
Query: 16 INEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGT 75
++EEY +WK N P +YD V L WPSLT QWLP T VQ D F + GT
Sbjct: 10 VDEEYDLWKSNVPLMYDFVSETRLTWPSLTVQWLP--TPVQ--ELDGGF--IKQELIIGT 63
Query: 76 HTS-DEQNHLLIASVQLP-----NEDAQFDASNYDTDKGGNVQLPNEDAQFDASNYDTDK 129
HTS +E+N+L A + LP NED Q +A + ++ P + + A Y+ ++
Sbjct: 64 HTSGEEENYLKFAEINLPKEILSNEDPQEEAGE---EYQSSLPAPRSNIRITAK-YEHEE 119
Query: 130 GGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSW 189
+ P + + + T+ L+ +R ++ H + Y LS+
Sbjct: 120 EITRARYMPQDPNIVATINGQGTVFLY--------SRSEGLQSTLKFHK---DNGYALSF 168
Query: 190 NPSLNGYLLSASDDHTICLWDINA 213
+ + G LLS SDDHT+ LW++ +
Sbjct: 169 STLVKGRLLSGSDDHTVALWEVGS 192
Score = 140 (54.3 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 31/88 (35%), Positives = 46/88 (52%)
Query: 242 LILGTHTS-DEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHE 300
LI+GTHTS +E+N+L A + LP E + + + + I I K HE
Sbjct: 59 LIIGTHTSGEEENYLKFAEINLPKEILSNEDPQEEAGEEYQSSLPAPRSNIRITAKYEHE 118
Query: 301 GEVNRARYMPQNPCVIATKTPSSDVLVF 328
E+ RARYMPQ+P ++AT V ++
Sbjct: 119 EEITRARYMPQDPNIVATINGQGTVFLY 146
>GENEDB_PFALCIPARUM|PF13_0149 [details] [associations]
symbol:PF13_0149 "chromatin assembly factor 1
subunit, putative" species:5833 "Plasmodium falciparum" [GO:0006333
"chromatin assembly or disassembly" evidence=ISS] [GO:0051082
"unfolded protein binding" evidence=ISS] [GO:0042393 "histone
binding" evidence=ISS] [GO:0003682 "chromatin binding"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0051082 GO:GO:0003682 GO:GO:0006333
GO:GO:0042393 GO:GO:0005678 EMBL:AL844509 KO:K10752
InterPro:IPR022052 Pfam:PF12265 OMA:EVNYLSF RefSeq:XP_001350006.1
ProteinModelPortal:Q8IE52 EnsemblProtists:PF13_0149:mRNA
GeneID:814119 KEGG:pfa:PF13_0149 EuPathDB:PlasmoDB:PF3D7_1329300
HOGENOM:HOG000283238 ProtClustDB:CLSZ2500737 Uniprot:Q8IE52
Length = 582
Score = 205 (77.2 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 43/126 (34%), Positives = 67/126 (53%)
Query: 236 DYSIHRLILGTHTSDEQ-NHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSG----K 290
+Y ++++LGTHTS++ ++ I ++ P + D Y+ G G
Sbjct: 81 NYFTNKVLLGTHTSNQDLEYVYIGEIKCPIFSIKEDVLQYENYSGFISNKKKKKGHPLPS 140
Query: 291 IEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLR 350
E++ K+ H GEV RA +P N I T+T + + L+FDYTKHPS P C+P + L+
Sbjct: 141 FEVKAKLLHPGEVIRATNLPSNSFFIVTQTSNGNALLFDYTKHPSFPSDMSTCYPQMILK 200
Query: 351 GHQKEG 356
GH EG
Sbjct: 201 GHTNEG 206
Score = 152 (58.6 bits), Expect = 5.6e-11, Sum P(2) = 5.6e-11
Identities = 56/205 (27%), Positives = 90/205 (43%)
Query: 3 LKKPFDDAVEER----VINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLP 58
L P ++ V E + NE + IW+KNTPFLY ++ H L+WPSLT ++L
Sbjct: 20 LNTPIENEVTENNYVDIQNERHIIWRKNTPFLYSSLLKHKLDWPSLTVEFL--------- 70
Query: 59 NEDAQFDAS-NYDTDK---GTHTSDEQ-NHLLIASVQLPNEDAQFDASNYDTDKG--GNV 111
D F + NY T+K GTHTS++ ++ I ++ P + D Y+ G N
Sbjct: 71 GGDNSFKSKLNYFTNKVLLGTHTSNQDLEYVYIGEIKCPIFSIKEDVLQYENYSGFISNK 130
Query: 112 QLPNEDA--QFDASNYDTDKGGYGLSWN-PSLNGYLLSASDDHTICLWDIN---ATPKEN 165
+ F+ G + N PS + ++++ + + L+D + P +
Sbjct: 131 KKKKGHPLPSFEVKAKLLHPGEVIRATNLPSNSFFIVTQTSNGNALLFDYTKHPSFPSDM 190
Query: 166 RVIDAKTIFTGHTAVVEVRYGLSWN 190
+ I GHT GL WN
Sbjct: 191 STCYPQMILKGHT---NEGSGLCWN 212
Score = 74 (31.1 bits), Expect = 5.6e-11, Sum P(2) = 5.6e-11
Identities = 21/55 (38%), Positives = 27/55 (49%)
Query: 185 YGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSI 239
+G N + N L S S D +ICLWDIN K N V +T + DY+I
Sbjct: 315 FGTEVNTT-NLLLASCSVDGSICLWDINKGTKSNDV--PRTYGLNKSGKTADYNI 366
>UNIPROTKB|Q8IE52 [details] [associations]
symbol:PF13_0149 "Chromatin assembly factor 1 subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0003682
"chromatin binding" evidence=ISS] [GO:0006333 "chromatin assembly
or disassembly" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0051082 "unfolded protein binding" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0051082 GO:GO:0003682 GO:GO:0006333
GO:GO:0042393 GO:GO:0005678 EMBL:AL844509 KO:K10752
InterPro:IPR022052 Pfam:PF12265 OMA:EVNYLSF RefSeq:XP_001350006.1
ProteinModelPortal:Q8IE52 EnsemblProtists:PF13_0149:mRNA
GeneID:814119 KEGG:pfa:PF13_0149 EuPathDB:PlasmoDB:PF3D7_1329300
HOGENOM:HOG000283238 ProtClustDB:CLSZ2500737 Uniprot:Q8IE52
Length = 582
Score = 205 (77.2 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 43/126 (34%), Positives = 67/126 (53%)
Query: 236 DYSIHRLILGTHTSDEQ-NHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSG----K 290
+Y ++++LGTHTS++ ++ I ++ P + D Y+ G G
Sbjct: 81 NYFTNKVLLGTHTSNQDLEYVYIGEIKCPIFSIKEDVLQYENYSGFISNKKKKKGHPLPS 140
Query: 291 IEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLR 350
E++ K+ H GEV RA +P N I T+T + + L+FDYTKHPS P C+P + L+
Sbjct: 141 FEVKAKLLHPGEVIRATNLPSNSFFIVTQTSNGNALLFDYTKHPSFPSDMSTCYPQMILK 200
Query: 351 GHQKEG 356
GH EG
Sbjct: 201 GHTNEG 206
Score = 152 (58.6 bits), Expect = 5.6e-11, Sum P(2) = 5.6e-11
Identities = 56/205 (27%), Positives = 90/205 (43%)
Query: 3 LKKPFDDAVEER----VINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLP 58
L P ++ V E + NE + IW+KNTPFLY ++ H L+WPSLT ++L
Sbjct: 20 LNTPIENEVTENNYVDIQNERHIIWRKNTPFLYSSLLKHKLDWPSLTVEFL--------- 70
Query: 59 NEDAQFDAS-NYDTDK---GTHTSDEQ-NHLLIASVQLPNEDAQFDASNYDTDKG--GNV 111
D F + NY T+K GTHTS++ ++ I ++ P + D Y+ G N
Sbjct: 71 GGDNSFKSKLNYFTNKVLLGTHTSNQDLEYVYIGEIKCPIFSIKEDVLQYENYSGFISNK 130
Query: 112 QLPNEDA--QFDASNYDTDKGGYGLSWN-PSLNGYLLSASDDHTICLWDIN---ATPKEN 165
+ F+ G + N PS + ++++ + + L+D + P +
Sbjct: 131 KKKKGHPLPSFEVKAKLLHPGEVIRATNLPSNSFFIVTQTSNGNALLFDYTKHPSFPSDM 190
Query: 166 RVIDAKTIFTGHTAVVEVRYGLSWN 190
+ I GHT GL WN
Sbjct: 191 STCYPQMILKGHT---NEGSGLCWN 212
Score = 74 (31.1 bits), Expect = 5.6e-11, Sum P(2) = 5.6e-11
Identities = 21/55 (38%), Positives = 27/55 (49%)
Query: 185 YGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSI 239
+G N + N L S S D +ICLWDIN K N V +T + DY+I
Sbjct: 315 FGTEVNTT-NLLLASCSVDGSICLWDINKGTKSNDV--PRTYGLNKSGKTADYNI 366
>GENEDB_PFALCIPARUM|PF14_0314 [details] [associations]
symbol:PF14_0314 "chromatin assembly factor 1
p55 subunit, putative" species:5833 "Plasmodium falciparum"
[GO:0051082 "unfolded protein binding" evidence=ISS] [GO:0042393
"histone binding" evidence=ISS] [GO:0006334 "nucleosome assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0051082 EMBL:AE014187 GO:GO:0042393
GO:GO:0006334 GO:GO:0005678 KO:K10752 InterPro:IPR022052
Pfam:PF12265 RefSeq:XP_001348488.2 ProteinModelPortal:Q8ILD0
EnsemblProtists:PF14_0314:mRNA GeneID:811896 KEGG:pfa:PF14_0314
EuPathDB:PlasmoDB:PF3D7_1433300 HOGENOM:HOG000281237 Uniprot:Q8ILD0
Length = 428
Score = 199 (75.1 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 56/206 (27%), Positives = 96/206 (46%)
Query: 18 EEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHT 77
+ YK W+ NT LY+++M + EWPSL +WLP V D ++ + D GT+T
Sbjct: 30 DNYKYWQYNTILLYNVIMIYTCEWPSLFIEWLPKVYK-----NDEEY--AYQDLILGTYT 82
Query: 78 SDEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQ-FDASNYDTDKGGYG-LS 135
+++ N++LI V LP+E+ + + Y+ N+ ++ F N + +S
Sbjct: 83 TEKNNYILILEVTLPSEEFSYSSFYYEKINDYRHNFCNDTSKNFRIKNKIYHESEINKIS 142
Query: 136 WNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKT--IFTGHTAVVEVRY---GLSWN 190
P + D I +++IN ++ + K I T + Y GL W+
Sbjct: 143 CYPENADIVACFCSDGNINIFNINDYYNKDDEDEIKNDNILTFDKTLKGHLYQGWGLEWD 202
Query: 191 PSLNGYLLSASDDHTICLWDINATPK 216
N Y+ S DD +C+WD+N + K
Sbjct: 203 DK-NNYISSCGDDSYLCIWDMNTSDK 227
Score = 147 (56.8 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 36/128 (28%), Positives = 65/128 (50%)
Query: 235 EDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGF-GSVSGKIEI 293
E+Y+ LILGT+T+++ N++LI V LP+E+ + + Y+ F S I
Sbjct: 69 EEYAYQDLILGTYTTEKNNYILILEVTLPSEEFSYSSFYYEKINDYRHNFCNDTSKNFRI 128
Query: 294 EIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHP-----DLR 348
+ KI HE E+N+ P+N ++A ++ +F+ + +K D + + D
Sbjct: 129 KNKIYHESEINKISCYPENADIVACFCSDGNINIFNINDYYNKDDEDEIKNDNILTFDKT 188
Query: 349 LRGHQKEG 356
L+GH +G
Sbjct: 189 LKGHLYQG 196
>UNIPROTKB|Q8ILD0 [details] [associations]
symbol:PF14_0314 "Chromatin assembly factor 1 P55 subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0006334
"nucleosome assembly" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0051082 "unfolded protein binding" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0051082 EMBL:AE014187 GO:GO:0042393
GO:GO:0006334 GO:GO:0005678 KO:K10752 InterPro:IPR022052
Pfam:PF12265 RefSeq:XP_001348488.2 ProteinModelPortal:Q8ILD0
EnsemblProtists:PF14_0314:mRNA GeneID:811896 KEGG:pfa:PF14_0314
EuPathDB:PlasmoDB:PF3D7_1433300 HOGENOM:HOG000281237 Uniprot:Q8ILD0
Length = 428
Score = 199 (75.1 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 56/206 (27%), Positives = 96/206 (46%)
Query: 18 EEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHT 77
+ YK W+ NT LY+++M + EWPSL +WLP V D ++ + D GT+T
Sbjct: 30 DNYKYWQYNTILLYNVIMIYTCEWPSLFIEWLPKVYK-----NDEEY--AYQDLILGTYT 82
Query: 78 SDEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQ-FDASNYDTDKGGYG-LS 135
+++ N++LI V LP+E+ + + Y+ N+ ++ F N + +S
Sbjct: 83 TEKNNYILILEVTLPSEEFSYSSFYYEKINDYRHNFCNDTSKNFRIKNKIYHESEINKIS 142
Query: 136 WNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKT--IFTGHTAVVEVRY---GLSWN 190
P + D I +++IN ++ + K I T + Y GL W+
Sbjct: 143 CYPENADIVACFCSDGNINIFNINDYYNKDDEDEIKNDNILTFDKTLKGHLYQGWGLEWD 202
Query: 191 PSLNGYLLSASDDHTICLWDINATPK 216
N Y+ S DD +C+WD+N + K
Sbjct: 203 DK-NNYISSCGDDSYLCIWDMNTSDK 227
Score = 147 (56.8 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 36/128 (28%), Positives = 65/128 (50%)
Query: 235 EDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGF-GSVSGKIEI 293
E+Y+ LILGT+T+++ N++LI V LP+E+ + + Y+ F S I
Sbjct: 69 EEYAYQDLILGTYTTEKNNYILILEVTLPSEEFSYSSFYYEKINDYRHNFCNDTSKNFRI 128
Query: 294 EIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHP-----DLR 348
+ KI HE E+N+ P+N ++A ++ +F+ + +K D + + D
Sbjct: 129 KNKIYHESEINKISCYPENADIVACFCSDGNINIFNINDYYNKDDEDEIKNDNILTFDKT 188
Query: 349 LRGHQKEG 356
L+GH +G
Sbjct: 189 LKGHLYQG 196
>CGD|CAL0003130 [details] [associations]
symbol:orf19.7185 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0003130 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR022052 Pfam:PF12265 EMBL:AACQ01000089
RefSeq:XP_715234.1 RefSeq:XP_889000.1 ProteinModelPortal:Q5A0B0
GeneID:3643101 GeneID:3704066 KEGG:cal:CaO19.7185
KEGG:cal:CaO19_7185 HOGENOM:HOG000137539 Uniprot:Q5A0B0
Length = 485
Score = 158 (60.7 bits), Expect = 1.3e-10, Sum P(3) = 1.3e-10
Identities = 33/86 (38%), Positives = 51/86 (59%)
Query: 8 DDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDAS 67
+ ++E+++NEE+KIWKK P LYD + T AL+ PSL QWLP TSV + + +F
Sbjct: 64 EQQLQEKIVNEEFKIWKKTVPLLYDFIHTFALDNPSLVFQWLP-TTSVSQSDLELKFLIG 122
Query: 68 NYDTDKGTHTSDEQNHLLIASVQLPN 93
+K +N+L + S+ LP+
Sbjct: 123 TNAINKS------ENYLKLTSISLPS 142
Score = 58 (25.5 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
Identities = 17/52 (32%), Positives = 26/52 (50%)
Query: 187 LSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYS 238
L W + NG+L S S+D I LW ++ K + + +F GH + D S
Sbjct: 219 LDWVDN-NGFL-SGSNDAQIALWQVD---KSSTPLQ---LFKGHHGAINDIS 262
Score = 51 (23.0 bits), Expect = 1.3e-10, Sum P(3) = 1.3e-10
Identities = 22/92 (23%), Positives = 37/92 (40%)
Query: 134 LSWNPSLNGYLLSASDDHTICLWDIN--ATPKENRVIDAKTIFTGHTAVVEVRYGLSWNP 191
+ ++P + + D+ + L+DI +TP F GH VR L W+
Sbjct: 306 IQFHPDIQTLYATGGKDNVVSLYDIRNYSTPFRK--------FYGHND--SVRQ-LQWDW 354
Query: 192 SLNGYLLSASDDHTICLWDINATPKENRVIDA 223
+ L+S D I WD+ ++ DA
Sbjct: 355 NNPDILVSCGLDKRIIFWDLKNLDEDFTYPDA 386
Score = 46 (21.3 bits), Expect = 1.3e-10, Sum P(3) = 1.3e-10
Identities = 17/74 (22%), Positives = 33/74 (44%)
Query: 210 DINATPKENRVIDA--KTIFTGHTAVVEDYSIH---RLILGTHTSDEQNHLLIASVQLPN 264
D N+ K+ D K + GHT D+ IH + I G+ D++ + LP
Sbjct: 392 DTNSKRKQAVKTDPCLKYVHGGHTRRTNDFDIHPKVKNIFGS-VGDDKLLEIWKPKSLPG 450
Query: 265 EDAQFDASNYDTDK 278
++ + +++ D+
Sbjct: 451 DEPEQESTEVQEDE 464
>UNIPROTKB|Q5A0B0 [details] [associations]
symbol:CaO19.7185 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0003130 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR022052 Pfam:PF12265 EMBL:AACQ01000089
RefSeq:XP_715234.1 RefSeq:XP_889000.1 ProteinModelPortal:Q5A0B0
GeneID:3643101 GeneID:3704066 KEGG:cal:CaO19.7185
KEGG:cal:CaO19_7185 HOGENOM:HOG000137539 Uniprot:Q5A0B0
Length = 485
Score = 158 (60.7 bits), Expect = 1.3e-10, Sum P(3) = 1.3e-10
Identities = 33/86 (38%), Positives = 51/86 (59%)
Query: 8 DDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDAS 67
+ ++E+++NEE+KIWKK P LYD + T AL+ PSL QWLP TSV + + +F
Sbjct: 64 EQQLQEKIVNEEFKIWKKTVPLLYDFIHTFALDNPSLVFQWLP-TTSVSQSDLELKFLIG 122
Query: 68 NYDTDKGTHTSDEQNHLLIASVQLPN 93
+K +N+L + S+ LP+
Sbjct: 123 TNAINKS------ENYLKLTSISLPS 142
Score = 58 (25.5 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
Identities = 17/52 (32%), Positives = 26/52 (50%)
Query: 187 LSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYS 238
L W + NG+L S S+D I LW ++ K + + +F GH + D S
Sbjct: 219 LDWVDN-NGFL-SGSNDAQIALWQVD---KSSTPLQ---LFKGHHGAINDIS 262
Score = 51 (23.0 bits), Expect = 1.3e-10, Sum P(3) = 1.3e-10
Identities = 22/92 (23%), Positives = 37/92 (40%)
Query: 134 LSWNPSLNGYLLSASDDHTICLWDIN--ATPKENRVIDAKTIFTGHTAVVEVRYGLSWNP 191
+ ++P + + D+ + L+DI +TP F GH VR L W+
Sbjct: 306 IQFHPDIQTLYATGGKDNVVSLYDIRNYSTPFRK--------FYGHND--SVRQ-LQWDW 354
Query: 192 SLNGYLLSASDDHTICLWDINATPKENRVIDA 223
+ L+S D I WD+ ++ DA
Sbjct: 355 NNPDILVSCGLDKRIIFWDLKNLDEDFTYPDA 386
Score = 46 (21.3 bits), Expect = 1.3e-10, Sum P(3) = 1.3e-10
Identities = 17/74 (22%), Positives = 33/74 (44%)
Query: 210 DINATPKENRVIDA--KTIFTGHTAVVEDYSIH---RLILGTHTSDEQNHLLIASVQLPN 264
D N+ K+ D K + GHT D+ IH + I G+ D++ + LP
Sbjct: 392 DTNSKRKQAVKTDPCLKYVHGGHTRRTNDFDIHPKVKNIFGS-VGDDKLLEIWKPKSLPG 450
Query: 265 EDAQFDASNYDTDK 278
++ + +++ D+
Sbjct: 451 DEPEQESTEVQEDE 464
>TAIR|locus:2134408 [details] [associations]
symbol:NFC5 "AT4G29730" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006351 GO:GO:0016568
EMBL:AL161575 EMBL:AL079344 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000160330
ProtClustDB:CLSN2918036 EMBL:BT010610 EMBL:AK176425 IPI:IPI00548369
PIR:T09936 RefSeq:NP_194702.2 UniGene:At.31893
ProteinModelPortal:Q9SU78 SMR:Q9SU78 STRING:Q9SU78 PaxDb:Q9SU78
PRIDE:Q9SU78 EnsemblPlants:AT4G29730.1 GeneID:829094
KEGG:ath:AT4G29730 GeneFarm:2946 TAIR:At4g29730 InParanoid:Q9SU78
OMA:VGKKSER PhylomeDB:Q9SU78 Genevestigator:Q9SU78
GermOnline:AT4G29730 Uniprot:Q9SU78
Length = 487
Score = 118 (46.6 bits), Expect = 9.6e-10, Sum P(2) = 9.6e-10
Identities = 26/61 (42%), Positives = 36/61 (59%)
Query: 297 INHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNG--ECHPDLRLRGHQK 354
I H GEVNR R +PQN ++AT T S D+L+++ P + G + PDL L GHQ
Sbjct: 141 IIHPGEVNRIRELPQNSKIVATHTDSPDILIWNTETQPDRYAVLGAPDSRPDLLLIGHQD 200
Query: 355 E 355
+
Sbjct: 201 D 201
Score = 97 (39.2 bits), Expect = 9.6e-10, Sum P(2) = 9.6e-10
Identities = 15/41 (36%), Positives = 24/41 (58%)
Query: 12 EERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDV 52
++ +++ Y WK P LYD + H L WPSL+ +W P +
Sbjct: 50 QKATVDDTYSQWKTLLPILYDSFVNHTLVWPSLSCRWGPQL 90
Score = 93 (37.8 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 25/86 (29%), Positives = 43/86 (50%)
Query: 134 LSWNPSLNGYLLSASDDHTICLWDI-NATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPS 192
+ WNP N +L+ S D+T+ ++D N T N V F GH A V + W+P
Sbjct: 323 VDWNPHDNNLILTGSADNTVRVFDRRNLT--SNGVGSPVYKFEGHRAAVLC---VQWSPD 377
Query: 193 LNGYLLSASDDHTICLWDINATPKEN 218
+ S+++D + +WD + K++
Sbjct: 378 KSSVFGSSAEDGLLNIWDCDRVGKKS 403
Score = 83 (34.3 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 40/164 (24%), Positives = 64/164 (39%)
Query: 72 DKGTHTSDEQNHLLIASVQLPNEDAQFDASNYDTDKGGNVQLPNEDAQFDASNYDTDKGG 131
DK + Q+H+ +A + + F + +DK G + + DT +
Sbjct: 221 DKSVILWNIQDHITMAGSDSKSPGSSFKQTGEGSDKTGGPSVGPRGIY--NGHKDTVED- 277
Query: 132 YGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNP 191
+++ PS S DD + LWD A + H A + + WNP
Sbjct: 278 --VAFCPSSAQEFCSVGDDSCLMLWDARTGTSP-----AMKVEKAHDADLHC---VDWNP 327
Query: 192 SLNGYLLSASDDHTICLWDI-NATPKENRVIDAKTIFTGHTAVV 234
N +L+ S D+T+ ++D N T N V F GH A V
Sbjct: 328 HDNNLILTGSADNTVRVFDRRNLT--SNGVGSPVYKFEGHRAAV 369
Score = 56 (24.8 bits), Expect = 0.00038, Sum P(3) = 0.00038
Identities = 18/79 (22%), Positives = 34/79 (43%)
Query: 138 PSLNGYLLSASDDHTICLWDINATPKENRVIDAKT-----IFTGHTAVVEVRYGLSWNPS 192
P + + + +D I +W+ P V+ A + GH E + L+ P+
Sbjct: 154 PQNSKIVATHTDSPDILIWNTETQPDRYAVLGAPDSRPDLLLIGHQDDAE--FALAMCPT 211
Query: 193 LNGYLLSASDDHTICLWDI 211
++LS D ++ LW+I
Sbjct: 212 -EPFVLSGGKDKSVILWNI 229
Score = 46 (21.3 bits), Expect = 0.00038, Sum P(3) = 0.00038
Identities = 14/61 (22%), Positives = 29/61 (47%)
Query: 293 IEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGH 352
++++ H+ +++ + P + +I T + + V VFD S NG P + GH
Sbjct: 310 MKVEKAHDADLHCVDWNPHDNNLILTGSADNTVRVFDRRNLTS----NGVGSPVYKFEGH 365
Query: 353 Q 353
+
Sbjct: 366 R 366
>GENEDB_PFALCIPARUM|PFA0520c [details] [associations]
symbol:PFA0520c "chromatin assembly factor 1
protein WD40 domain, putative" species:5833 "Plasmodium falciparum"
[GO:0051082 "unfolded protein binding" evidence=ISS] [GO:0042393
"histone binding" evidence=ISS] [GO:0006334 "nucleosome assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0051082
GO:GO:0042393 GO:GO:0006334 GO:GO:0005678 KO:K10752
InterPro:IPR022052 Pfam:PF12265 EMBL:AL844501 OMA:VLYDLVI
RefSeq:XP_001351036.1 ProteinModelPortal:Q8I238 PRIDE:Q8I238
EnsemblProtists:PFA0520c:mRNA GeneID:813241 KEGG:pfa:PFA_0520c
HOGENOM:HOG000283790 ProtClustDB:CLSZ2433094 Uniprot:Q8I238
Length = 446
Score = 157 (60.3 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 81/349 (23%), Positives = 148/349 (42%)
Query: 9 DAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASN 68
D EE + ++ WK N+ LYD V LEWPSL+ + D L N + N
Sbjct: 36 DEDEEEDVETQFNNWKTNSGLLYDFVCRKELEWPSLSVDF-GDFHHENLEN-----NVLN 89
Query: 69 YDTDKGTHTSD-EQNHLLIASVQLPNEDAQFDASNYDTDKG-GNVQLPNEDAQFDASNYD 126
GTHTS+ E N L + V P E + Y +++ +E +F +
Sbjct: 90 QIVCVGTHTSNKEPNFLYVCDVLFPLEQVPQEKCIYKSNENYEGFDFCSEKKKFTIKSKI 149
Query: 127 TDKGGYG-LSWNP-SLNGYLLSASDDHTICLWDINATPKE--NRVIDAKTIFTGHTAVVE 182
G + + P ++++ + D + L+DIN E + ++ + F G+ +
Sbjct: 150 AHTGEVNRIKFVPLEKKNFVVTKAVDGNVHLFDINKHKIETVDDKMNPEVSFVGNQSD-- 207
Query: 183 VRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRL 242
+GL + P + Y+L+ ++D I ++D N + K + + + L
Sbjct: 208 -GFGLDFQP-IKKYILTCANDGLINVYDYNTLNTKTVQPFYKVQYKSPVNDISPTNDPNL 265
Query: 243 ILGTHTSDEQNHLLIASVQLP-NEDAQ--------FDASNYDTDKGDFGGFGSVSGKIEI 293
IL + ++LI ++ NE AQ + +T G F GS +GKI++
Sbjct: 266 ILACA---DNGYILIFDFRIKSNEPAQQTLGQQVPVNTVALNTFTGLFAS-GSDNGKIKV 321
Query: 294 -EIKINHEGE--VN-------RARYMPQNPCVIATKTPSSDVLVFDYTK 332
++K HE + +N R + P + ++A+ + + + V+D K
Sbjct: 322 WDLKKFHEPQHIINAHKEAIIRLNFSPNDASILASASNNRFINVYDLNK 370
Score = 145 (56.1 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 39/131 (29%), Positives = 69/131 (52%)
Query: 230 HTAVVEDYSIHRLI-LGTHTSD-EQNHLLIASVQLPNEDAQFDASNYDTDKGDFG-GFGS 286
H +E+ +++++ +GTHTS+ E N L + V P E + Y +++ G F S
Sbjct: 79 HHENLENNVLNQIVCVGTHTSNKEPNFLYVCDVLFPLEQVPQEKCIYKSNENYEGFDFCS 138
Query: 287 VSGKIEIEIKINHEGEVNRARYMP-QNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHP 345
K I+ KI H GEVNR +++P + + TK +V +FD KH + + + +P
Sbjct: 139 EKKKFTIKSKIAHTGEVNRIKFVPLEKKNFVVTKAVDGNVHLFDINKHKIET-VDDKMNP 197
Query: 346 DLRLRGHQKEG 356
++ G+Q +G
Sbjct: 198 EVSFVGNQSDG 208
>UNIPROTKB|Q8I238 [details] [associations]
symbol:PFA_0520c "Chromatin assembly factor 1 protein WD40
domain, putative" species:36329 "Plasmodium falciparum 3D7"
[GO:0006334 "nucleosome assembly" evidence=ISS] [GO:0042393
"histone binding" evidence=ISS] [GO:0051082 "unfolded protein
binding" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0051082
GO:GO:0042393 GO:GO:0006334 GO:GO:0005678 KO:K10752
InterPro:IPR022052 Pfam:PF12265 EMBL:AL844501 OMA:VLYDLVI
RefSeq:XP_001351036.1 ProteinModelPortal:Q8I238 PRIDE:Q8I238
EnsemblProtists:PFA0520c:mRNA GeneID:813241 KEGG:pfa:PFA_0520c
HOGENOM:HOG000283790 ProtClustDB:CLSZ2433094 Uniprot:Q8I238
Length = 446
Score = 157 (60.3 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 81/349 (23%), Positives = 148/349 (42%)
Query: 9 DAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASN 68
D EE + ++ WK N+ LYD V LEWPSL+ + D L N + N
Sbjct: 36 DEDEEEDVETQFNNWKTNSGLLYDFVCRKELEWPSLSVDF-GDFHHENLEN-----NVLN 89
Query: 69 YDTDKGTHTSD-EQNHLLIASVQLPNEDAQFDASNYDTDKG-GNVQLPNEDAQFDASNYD 126
GTHTS+ E N L + V P E + Y +++ +E +F +
Sbjct: 90 QIVCVGTHTSNKEPNFLYVCDVLFPLEQVPQEKCIYKSNENYEGFDFCSEKKKFTIKSKI 149
Query: 127 TDKGGYG-LSWNP-SLNGYLLSASDDHTICLWDINATPKE--NRVIDAKTIFTGHTAVVE 182
G + + P ++++ + D + L+DIN E + ++ + F G+ +
Sbjct: 150 AHTGEVNRIKFVPLEKKNFVVTKAVDGNVHLFDINKHKIETVDDKMNPEVSFVGNQSD-- 207
Query: 183 VRYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRL 242
+GL + P + Y+L+ ++D I ++D N + K + + + L
Sbjct: 208 -GFGLDFQP-IKKYILTCANDGLINVYDYNTLNTKTVQPFYKVQYKSPVNDISPTNDPNL 265
Query: 243 ILGTHTSDEQNHLLIASVQLP-NEDAQ--------FDASNYDTDKGDFGGFGSVSGKIEI 293
IL + ++LI ++ NE AQ + +T G F GS +GKI++
Sbjct: 266 ILACA---DNGYILIFDFRIKSNEPAQQTLGQQVPVNTVALNTFTGLFAS-GSDNGKIKV 321
Query: 294 -EIKINHEGE--VN-------RARYMPQNPCVIATKTPSSDVLVFDYTK 332
++K HE + +N R + P + ++A+ + + + V+D K
Sbjct: 322 WDLKKFHEPQHIINAHKEAIIRLNFSPNDASILASASNNRFINVYDLNK 370
Score = 145 (56.1 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 39/131 (29%), Positives = 69/131 (52%)
Query: 230 HTAVVEDYSIHRLI-LGTHTSD-EQNHLLIASVQLPNEDAQFDASNYDTDKGDFG-GFGS 286
H +E+ +++++ +GTHTS+ E N L + V P E + Y +++ G F S
Sbjct: 79 HHENLENNVLNQIVCVGTHTSNKEPNFLYVCDVLFPLEQVPQEKCIYKSNENYEGFDFCS 138
Query: 287 VSGKIEIEIKINHEGEVNRARYMP-QNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHP 345
K I+ KI H GEVNR +++P + + TK +V +FD KH + + + +P
Sbjct: 139 EKKKFTIKSKIAHTGEVNRIKFVPLEKKNFVVTKAVDGNVHLFDINKHKIET-VDDKMNP 197
Query: 346 DLRLRGHQKEG 356
++ G+Q +G
Sbjct: 198 EVSFVGNQSDG 208
>CGD|CAL0005992 [details] [associations]
symbol:orf19.3581 species:5476 "Candida albicans" [GO:0042393
"histone binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0006335
"DNA replication-dependent nucleosome assembly" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0005992 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 EMBL:AACQ01000094
EMBL:AACQ01000093 InterPro:IPR022052 Pfam:PF12265
HOGENOM:HOG000160330 RefSeq:XP_714940.1 RefSeq:XP_715003.1
ProteinModelPortal:Q59ZD9 STRING:Q59ZD9 GeneID:3643390
GeneID:3643420 KEGG:cal:CaO19.11065 KEGG:cal:CaO19.3581
Uniprot:Q59ZD9
Length = 435
Score = 156 (60.0 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 61/237 (25%), Positives = 114/237 (48%)
Query: 8 DDAVEERVINEE----YKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSV----QLPN 59
D VEE I+E+ Y++WKKN P LYD ++T++L WPSL+ Q+ PD+T + + N
Sbjct: 27 DTPVEESAIDEKTQQNYRVWKKNAPLLYDYLVTNSLLWPSLSVQFFPDITHINDLGENKN 86
Query: 60 EDAQFDASNYDTDKGTHTSDEQ-NHLLIASVQLP-----NEDAQFDASNYDTDKGG-NVQ 112
E+ Q A GT T + +H+ I +Q+P N++ + + +++ ++ +
Sbjct: 87 EE-QIIAQRILL--GTFTLGQAIDHISI--LQIPSFKNLNQNIKINKLDFNPEREEFELT 141
Query: 113 LP--NEDAQFDASNY--DTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPK-ENRV 167
P N+ N+ D +K Y + P++ L SA++ + +++ +N +
Sbjct: 142 TPSLNKTKTLQKINHLGDVNKVRY-MPQKPNI---LASANNLGNLVIYERTRHKSFKNTI 197
Query: 168 ID----AKT---IFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKE 217
+D +K + H + + WN + G LLSA + + L+D+ E
Sbjct: 198 LDDTDLSKVQVRLVNKHIPSTTDIFAIDWNRNSEGLLLSADMNGLVNLYDLKKYESE 254
Score = 127 (49.8 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 30/107 (28%), Positives = 60/107 (56%)
Query: 235 EDYSIHRLILGTHTSDEQ-NHLLIASVQLP-----NEDAQFDASNYDTDKGDFGGFGSVS 288
E R++LGT T + +H+ I +Q+P N++ + + +++ ++ +F
Sbjct: 88 EQIIAQRILLGTFTLGQAIDHISI--LQIPSFKNLNQNIKINKLDFNPEREEFELTTPSL 145
Query: 289 GKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPS 335
K + KINH G+VN+ RYMPQ P ++A+ ++++++ T+H S
Sbjct: 146 NKTKTLQKINHLGDVNKVRYMPQKPNILASANNLGNLVIYERTRHKS 192
>CGD|CAL0005349 [details] [associations]
symbol:HAT2 species:5476 "Candida albicans" [GO:0000123
"histone acetyltransferase complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA;IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA;IDA] [GO:0016573 "histone acetylation"
evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:2000221
"negative regulation of pseudohyphal growth" evidence=IMP]
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
[GO:0034614 "cellular response to reactive oxygen species"
evidence=IMP] [GO:0006333 "chromatin assembly or disassembly"
evidence=IEA] [GO:0006348 "chromatin silencing at telomere"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005349 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006281 eggNOG:COG2319 GO:GO:0016568
KO:K10752 InterPro:IPR022052 Pfam:PF12265 EMBL:AACQ01000162
EMBL:AACQ01000158 RefSeq:XP_712278.1 RefSeq:XP_712421.1
ProteinModelPortal:Q59RH5 STRING:Q59RH5 GeneID:3645973
GeneID:3646093 KEGG:cal:CaO19.2146 KEGG:cal:CaO19.9693
Uniprot:Q59RH5
Length = 382
Score = 154 (59.3 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 68/235 (28%), Positives = 101/235 (42%)
Query: 8 DDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDAS 67
+ E I EEY++W+KN ++Y+ V AL WPSLT QWLP+ T+ + DA
Sbjct: 3 EQPTEPLSIKEEYQLWRKNCRYMYEFVSETALMWPSLTIQWLPNYTTT-----NGLIDAK 57
Query: 68 NYDTDKGTHTSDEQ-NHLLIASVQL---PN--------------EDAQFDASNYDTDKGG 109
GTHTS++ N L +AS QL PN +A+ + Y
Sbjct: 58 LL---LGTHTSNQSANQLKVASTQLSADPNVKANSKIKTVQKLENNAEICRARYMPQDAN 114
Query: 110 NVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVID 169
V N + D N DT+ Y + NGY LS + L A V D
Sbjct: 115 IVATINGLGEVDLYNLDTETR-YSHFAPHTKNGYGLSWNPKQKGLLVT-GADDNFVCVTD 172
Query: 170 AKTIFTGHTAVVE--VRYGLSWNPSLNGYLL-SASDDHTICLWDINATPKENRVI 221
T T + ++ + + W+ NG L S S+D + L+D ++N+V+
Sbjct: 173 TTTNKTTFKSDIQKDIVNDVKWH-QFNGNLFASVSEDSHVYLFDA----RDNKVV 222
>UNIPROTKB|Q59RH5 [details] [associations]
symbol:HAT2 "Histone acetyltransferase type B subunit 2"
species:237561 "Candida albicans SC5314" [GO:0005634 "nucleus"
evidence=IDA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0034614 "cellular response to reactive oxygen species"
evidence=IMP] [GO:2000221 "negative regulation of pseudohyphal
growth" evidence=IMP] [GO:0004402 "histone acetyltransferase
activity" evidence=IDA] [GO:0042393 "histone binding" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0005349 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006281
eggNOG:COG2319 GO:GO:0016568 KO:K10752 InterPro:IPR022052
Pfam:PF12265 EMBL:AACQ01000162 EMBL:AACQ01000158 RefSeq:XP_712278.1
RefSeq:XP_712421.1 ProteinModelPortal:Q59RH5 STRING:Q59RH5
GeneID:3645973 GeneID:3646093 KEGG:cal:CaO19.2146
KEGG:cal:CaO19.9693 Uniprot:Q59RH5
Length = 382
Score = 154 (59.3 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 68/235 (28%), Positives = 101/235 (42%)
Query: 8 DDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDAS 67
+ E I EEY++W+KN ++Y+ V AL WPSLT QWLP+ T+ + DA
Sbjct: 3 EQPTEPLSIKEEYQLWRKNCRYMYEFVSETALMWPSLTIQWLPNYTTT-----NGLIDAK 57
Query: 68 NYDTDKGTHTSDEQ-NHLLIASVQL---PN--------------EDAQFDASNYDTDKGG 109
GTHTS++ N L +AS QL PN +A+ + Y
Sbjct: 58 LL---LGTHTSNQSANQLKVASTQLSADPNVKANSKIKTVQKLENNAEICRARYMPQDAN 114
Query: 110 NVQLPNEDAQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVID 169
V N + D N DT+ Y + NGY LS + L A V D
Sbjct: 115 IVATINGLGEVDLYNLDTETR-YSHFAPHTKNGYGLSWNPKQKGLLVT-GADDNFVCVTD 172
Query: 170 AKTIFTGHTAVVE--VRYGLSWNPSLNGYLL-SASDDHTICLWDINATPKENRVI 221
T T + ++ + + W+ NG L S S+D + L+D ++N+V+
Sbjct: 173 TTTNKTTFKSDIQKDIVNDVKWH-QFNGNLFASVSEDSHVYLFDA----RDNKVV 222
>SGD|S000000399 [details] [associations]
symbol:MSI1 "Subunit of chromatin assembly factor I (CAF-1)"
species:4932 "Saccharomyces cerevisiae" [GO:0033186 "CAF-1 complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005737
"cytoplasm" evidence=IEA;IDA] [GO:0006335 "DNA
replication-dependent nucleosome assembly" evidence=IDA]
[GO:0042393 "histone binding" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000000399 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 EMBL:BK006936 EMBL:Z21487
GO:GO:0006335 GO:GO:0033186 InterPro:IPR022052 Pfam:PF12265
HOGENOM:HOG000160330 EMBL:M27300 EMBL:Z36064 EMBL:AY692834
PIR:S07865 RefSeq:NP_009754.1 ProteinModelPortal:P13712 SMR:P13712
DIP:DIP-338N IntAct:P13712 MINT:MINT-386252 STRING:P13712
PaxDb:P13712 PeptideAtlas:P13712 EnsemblFungi:YBR195C GeneID:852494
KEGG:sce:YBR195C CYGD:YBR195c OMA:MPDVTKT OrthoDB:EOG44TSHP
NextBio:971486 Genevestigator:P13712 GermOnline:YBR195C
Uniprot:P13712
Length = 422
Score = 153 (58.9 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 58/231 (25%), Positives = 100/231 (43%)
Query: 16 INEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNED--AQFDASNYDTDK 73
+ E Y WKKNT LYD + T++ +WPSLT Q+ PD+ + + + F +S D+
Sbjct: 19 LQERYSHWKKNTKLLYDYLNTNSTKWPSLTCQFFPDLDTTSDEHRILLSSFTSSQKPEDE 78
Query: 74 GTHTS--DEQNHLLIASVQ-LPNEDAQFDASNYDTDKGGNVQLPNEDAQFDASNYDTDKG 130
+ S H+ +S+ ++ +F N + + + L N+ + F N + ++
Sbjct: 79 TIYISKISTLGHIKWSSLNNFDMDEMEFKPEN--STRFPSKHLVNDISIF-FPNGECNRA 135
Query: 131 GYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKT-------IFTGHTAVVEV 183
Y L NP + + AS D I ++D R+ +K +F H + +V
Sbjct: 136 RY-LPQNPDI---IAGASSDGAIYIFD-RTKHGSTRIRQSKISHPFETKLFGSHGVIQDV 190
Query: 184 RY------------GLSWNPSLNGYLLSASDDHTICLWDINATPKENRVID 222
L+WN LLS+ + + +WDI EN +ID
Sbjct: 191 EAMDTSSADINEATSLAWNLQQEALLLSSHSNGQVQVWDIKQYSHENPIID 241
Score = 125 (49.1 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 40/129 (31%), Positives = 62/129 (48%)
Query: 240 HRLILGTHTSD---EQNHLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSV---SGKIEI 293
HR++L + TS E + I+ + +N+D D+ +F S S +
Sbjct: 62 HRILLSSFTSSQKPEDETIYISKISTLGHIKWSSLNNFDMDEMEFKPENSTRFPSKHLVN 121
Query: 294 EIKINH-EGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGEC-HP-DLRLR 350
+I I GE NRARY+PQNP +IA + + +FD TKH S + HP + +L
Sbjct: 122 DISIFFPNGECNRARYLPQNPDIIAGASSDGAIYIFDRTKHGSTRIRQSKISHPFETKLF 181
Query: 351 GHQKEGLIE 359
G G+I+
Sbjct: 182 G--SHGVIQ 188
>TAIR|locus:2050372 [details] [associations]
symbol:FVE species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0009826 "unidimensional
cell growth" evidence=IMP] [GO:0009908 "flower development"
evidence=IMP] [GO:0009965 "leaf morphogenesis" evidence=IMP]
[GO:0010090 "trichome morphogenesis" evidence=IMP] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=ISS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006281 "DNA repair"
evidence=IMP] [GO:0010224 "response to UV-B" evidence=IEP]
[GO:0046872 "metal ion binding" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 GO:GO:0030154
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005730 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0046872
GO:GO:0006281 eggNOG:COG2319 GO:GO:0006351 GO:GO:0016568
EMBL:AC005917 GO:GO:0009908 GO:GO:0010224 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000160330
EMBL:AF498101 EMBL:AF498102 EMBL:AY849994 EMBL:AY059799
EMBL:AY057655 EMBL:AY081447 EMBL:AF028711 EMBL:Z37286 EMBL:Z37287
IPI:IPI00539247 PIR:G84577 RefSeq:NP_565456.2 UniGene:At.20032
ProteinModelPortal:O22607 SMR:O22607 DIP:DIP-59614N STRING:O22607
PaxDb:O22607 PRIDE:O22607 EnsemblPlants:AT2G19520.1 GeneID:816471
KEGG:ath:AT2G19520 GeneFarm:2818 TAIR:At2g19520 InParanoid:O22607
OMA:CIRELEQ PhylomeDB:O22607 ProtClustDB:CLSN2918036
Genevestigator:O22607 GermOnline:AT2G19520 Uniprot:O22607
Length = 507
Score = 134 (52.2 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 51/207 (24%), Positives = 84/207 (40%)
Query: 16 INEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGT 75
++E+Y WK P LYD + H L WPSL+ +W P + N + + D
Sbjct: 64 VDEKYSQWKGLVPILYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTD----- 118
Query: 76 HTSDEQNHLLIASVQL--PNEDAQFDASNYDTDKGGNVQLPNEDAQFD-ASNYDT--DKG 130
N L+IA+ ++ P A S + NE+A+ Y T G
Sbjct: 119 --GSVPNTLVIANCEVVKPRVAAAEHISQF-----------NEEARSPFVKKYKTIIHPG 165
Query: 131 GYG-LSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKT-----IFTGHTAVVEVR 184
+ P + + + +D + +WD+ P + V+ A I TGH E
Sbjct: 166 EVNRIRELPQNSKIVATHTDSPDVLIWDVETQPNRHAVLGAANSRPDLILTGHQDNAE-- 223
Query: 185 YGLSWNPSLNGYLLSASDDHTICLWDI 211
+ L+ P+ ++LS D ++ LW I
Sbjct: 224 FALAMCPT-EPFVLSGGKDKSVVLWSI 249
Score = 126 (49.4 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 28/59 (47%), Positives = 36/59 (61%)
Query: 297 INHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECH--PDLRLRGHQ 353
I H GEVNR R +PQN ++AT T S DVL++D P++ G + PDL L GHQ
Sbjct: 161 IIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVETQPNRHAVLGAANSRPDLILTGHQ 219
Score = 45 (20.9 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 13/55 (23%), Positives = 26/55 (47%)
Query: 299 HEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQ 353
H+ +++ + P + +I T + + V +FD K + NG P + GH+
Sbjct: 336 HDADLHCVDWNPHDDNLILTGSADNTVRLFDRRKLTA----NGVGSPIYKFEGHK 386
Score = 40 (19.1 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 15/65 (23%), Positives = 24/65 (36%)
Query: 274 YDTDKGDFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKH 333
+D K G GS K E H+ V ++ P V + + ++DY +
Sbjct: 365 FDRRKLTANGVGSPIYKFE-----GHKAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYDRV 419
Query: 334 PSKPD 338
K D
Sbjct: 420 SKKSD 424
>UNIPROTKB|Q9BQ67 [details] [associations]
symbol:GRWD1 "Glutamate-rich WD repeat-containing protein
1" species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
CTD:83743 HOGENOM:HOG000036730 HOVERGEN:HBG051847 KO:K14848
OMA:NRLMMLR OrthoDB:EOG4CG084 EMBL:AF337808 EMBL:BC002440
EMBL:AB075822 IPI:IPI00027831 RefSeq:NP_113673.3 UniGene:Hs.400625
ProteinModelPortal:Q9BQ67 SMR:Q9BQ67 IntAct:Q9BQ67
MINT:MINT-1148872 STRING:Q9BQ67 PhosphoSite:Q9BQ67 DMDM:18202731
SWISS-2DPAGE:Q9BQ67 PaxDb:Q9BQ67 PeptideAtlas:Q9BQ67 PRIDE:Q9BQ67
DNASU:83743 Ensembl:ENST00000253237 GeneID:83743 KEGG:hsa:83743
UCSC:uc002pjd.2 GeneCards:GC19P048949 H-InvDB:HIX0080107
HGNC:HGNC:21270 HPA:HPA042643 MIM:610597 neXtProt:NX_Q9BQ67
PharmGKB:PA134897548 InParanoid:Q9BQ67 PhylomeDB:Q9BQ67
GenomeRNAi:83743 NextBio:72761 ArrayExpress:Q9BQ67 Bgee:Q9BQ67
CleanEx:HS_GRWD1 Genevestigator:Q9BQ67 GermOnline:ENSG00000105447
Uniprot:Q9BQ67
Length = 446
Score = 135 (52.6 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 35/106 (33%), Positives = 50/106 (47%)
Query: 131 GYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRV--IDAKTIFTGHTAVVEVRYGLS 188
G+ L W+P + G LL+ I LW TP + +D + F GHT VE L
Sbjct: 217 GFALDWSPRVTGRLLTGDCQKNIHLW----TPTDGGSWHVDQRP-FVGHTRSVE---DLQ 268
Query: 189 WNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVV 234
W+P+ N S S D +I +WDI A P + ++ T G V+
Sbjct: 269 WSPTENTVFASCSADASIRIWDIRAAPSKACMLTTATAHDGDVNVI 314
>FB|FBgn0022288 [details] [associations]
symbol:l(2)09851 "lethal (2) 09851" species:7227 "Drosophila
melanogaster" [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE013599 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 GeneTree:ENSGT00550000075124
KO:K14848 OMA:NRLMMLR EMBL:AY071477 EMBL:AY128462
RefSeq:NP_610182.3 UniGene:Dm.1493 UniGene:Dm.36762 SMR:Q8SYL1
IntAct:Q8SYL1 STRING:Q8SYL1 EnsemblMetazoa:FBtr0086043 GeneID:46662
KEGG:dme:Dmel_CG12792 UCSC:CG12792-RA FlyBase:FBgn0022288
InParanoid:Q8SYL1 OrthoDB:EOG441NSN GenomeRNAi:46662 NextBio:838859
Uniprot:Q8SYL1
Length = 456
Score = 133 (51.9 bits), Expect = 9.2e-06, P = 9.2e-06
Identities = 51/197 (25%), Positives = 84/197 (42%)
Query: 134 LSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSL 193
L W+P+ L S S D TI +WD A+P++ ++ T H + V V +SWN +
Sbjct: 275 LQWSPNERSVLASCSVDKTIRIWDCRASPQKACML---TCEDAHQSDVNV---ISWNRN- 327
Query: 194 NGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHRLILGTHTSDEQN 253
++ S DD + +WD+ + + K T H VE +L + D+Q
Sbjct: 328 EPFIASGGDDGYLHIWDLRQFQSKKPIATFKH-HTDHITTVEWSPAEATVLASGGDDDQI 386
Query: 254 HLLIASVQLPNEDAQFDASNYDTDKGDFGGFGSVSGKIEIEIKINHEG--EVNRARYMPQ 311
L +V+ + A A N D V K+ ++ H+G E+ + PQ
Sbjct: 387 ALWDLAVEKDIDQAVDPAQNED-----------VLNKLPPQLLFIHQGQKEIKELHWHPQ 435
Query: 312 NPCVIATKTPSSDVLVF 328
P V+ + T S +F
Sbjct: 436 LPGVLLS-TAHSGFNIF 451
Score = 123 (48.4 bits), Expect = 0.00012, P = 0.00012
Identities = 36/114 (31%), Positives = 55/114 (48%)
Query: 110 NVQLPNEDAQFDASNYDTDKG----GYGLSWNPSLNGYLLSASDDHTICLWDINATPKEN 165
N QL + Q +A T G G+ + W+PS +G L + I +W TP E+
Sbjct: 200 NAQLAKQYEQSEARPVFTFGGHQQEGFAIDWSPSADGVLATGDCRRDIHVW----TPVED 255
Query: 166 RV--IDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATPKE 217
+D + + GH+ VE L W+P+ L S S D TI +WD A+P++
Sbjct: 256 GTWKVDQRPL-AGHSQSVE---DLQWSPNERSVLASCSVDKTIRIWDCRASPQK 305
>UNIPROTKB|Q1JQD2 [details] [associations]
symbol:GRWD1 "Glutamate-rich WD repeat-containing protein
1" species:9913 "Bos taurus" [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 EMBL:BC116037 IPI:IPI00715008
RefSeq:NP_001069707.1 UniGene:Bt.3201 ProteinModelPortal:Q1JQD2
STRING:Q1JQD2 Ensembl:ENSBTAT00000000088 GeneID:540739
KEGG:bta:540739 CTD:83743 GeneTree:ENSGT00550000075124
HOGENOM:HOG000036730 HOVERGEN:HBG051847 InParanoid:Q1JQD2 KO:K14848
OMA:NRLMMLR OrthoDB:EOG4CG084 NextBio:20878807 Uniprot:Q1JQD2
Length = 446
Score = 130 (50.8 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 37/113 (32%), Positives = 55/113 (48%)
Query: 131 GYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRV--IDAKTIFTGHTAVVEVRYGLS 188
G+ L W+P + G LL+ I LW TP + +D + F GHT VE L
Sbjct: 217 GFALDWSPRVPGRLLTGDCQKNIHLW----TPTDGGSWHVDQRP-FVGHTRSVE---DLQ 268
Query: 189 WNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR 241
W+P+ + S S D +I +WDI A P + ++ T G V+ ++S HR
Sbjct: 269 WSPTEDTVFASCSADASIRIWDIRAAPSKACMLTTATAHDGDVNVI-NWS-HR 319
>MGI|MGI:2141989 [details] [associations]
symbol:Grwd1 "glutamate-rich WD repeat containing 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:2141989 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 EMBL:AC149053 CTD:83743
GeneTree:ENSGT00550000075124 HOGENOM:HOG000036730
HOVERGEN:HBG051847 KO:K14848 OMA:NRLMMLR EMBL:AB001539
EMBL:CH466603 EMBL:BC008121 IPI:IPI00123005 RefSeq:NP_700468.2
UniGene:Mm.274847 ProteinModelPortal:Q810D6 STRING:Q810D6
PhosphoSite:Q810D6 PaxDb:Q810D6 PRIDE:Q810D6
Ensembl:ENSMUST00000107723 Ensembl:ENSMUST00000131384 GeneID:101612
KEGG:mmu:101612 InParanoid:Q810D6 NextBio:355042 CleanEx:MM_GRWD1
Genevestigator:Q810D6 GermOnline:ENSMUSG00000053801 Uniprot:Q810D6
Length = 446
Score = 128 (50.1 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 34/106 (32%), Positives = 50/106 (47%)
Query: 131 GYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRV--IDAKTIFTGHTAVVEVRYGLS 188
G+ L W+P + G LL+ + LW TP E +D + F GHT VE L
Sbjct: 217 GFALDWSPRVPGRLLTGDCQKNVHLW----TPTEGGSWNVDQRP-FVGHTRSVE---DLQ 268
Query: 189 WNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVV 234
W+P+ + S S D +I +WDI A P + ++ T G V+
Sbjct: 269 WSPTEDTVFASCSADASIRIWDIRAAPGKACMLTTATAHDGDVNVI 314
>WB|WBGene00021899 [details] [associations]
symbol:Y54H5A.1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0009792 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
GeneTree:ENSGT00550000075124 HOGENOM:HOG000036730 KO:K14848
OMA:NRLMMLR EMBL:FO081201 RefSeq:NP_498091.1
ProteinModelPortal:Q9N393 SMR:Q9N393 DIP:DIP-26654N
MINT:MINT-1128766 STRING:Q9N393 PaxDb:Q9N393
EnsemblMetazoa:Y54H5A.1.1 EnsemblMetazoa:Y54H5A.1.2
EnsemblMetazoa:Y54H5A.1.3 GeneID:175701 KEGG:cel:CELE_Y54H5A.1
UCSC:Y54H5A.1.1 CTD:175701 WormBase:Y54H5A.1 InParanoid:Q9N393
NextBio:889274 Uniprot:Q9N393
Length = 453
Score = 127 (49.8 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 45/146 (30%), Positives = 65/146 (44%)
Query: 99 DASNYDTDKGGNVQLPNEDAQFDA---SNYDTDKGGYGLSWNPSLNGYLLSASDDHTICL 155
DA NY G + E + D +N + K GYGL+W+ G L + I L
Sbjct: 198 DALNYTHGMSGESK--TEVQKIDRPLFTNNGSGKEGYGLAWSSLKTGDLATGDIIKKIYL 255
Query: 156 WDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINATP 215
W + + + A + TGH VE L+W+P+ G L S S D +I LWD + P
Sbjct: 256 WQMKEGGQW--AVGANPL-TGHKKSVE---DLAWSPTETGLLASCSADGSIKLWDTRSAP 309
Query: 216 KENRVIDAKTIFTGHTAVVEDYSIHR 241
K+ V T+ H + V S +R
Sbjct: 310 KDACVC---TVQKAHESDVNVISWNR 332
>DICTYBASE|DDB_G0291566 [details] [associations]
symbol:grwd1 "glutamate-rich WD repeat-containing
protein 1" species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0291566 EMBL:AAFI02000177 GenomeReviews:CM000155_GR
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052
Pfam:PF12265 KO:K14848 OMA:NRLMMLR RefSeq:XP_635306.1
ProteinModelPortal:Q54ED4 STRING:Q54ED4 EnsemblProtists:DDB0267050
GeneID:8628250 KEGG:ddi:DDB_G0291566 ProtClustDB:CLSZ2732316
Uniprot:Q54ED4
Length = 482
Score = 127 (49.8 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 45/150 (30%), Positives = 70/150 (46%)
Query: 134 LSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSL 193
+ W+PS S S D T+ +WDI PK + A HTA V V +SW+ ++
Sbjct: 302 IQWSPSEEKVFASCSIDQTVRIWDIRK-PKPAITVKA------HTADVNV---ISWSRNV 351
Query: 194 NGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVE--DYSIHRLILGTHTSDE 251
L+S DD + +WD+ A + V D K TG +E Y ++I+ + SD+
Sbjct: 352 EYLLVSGCDDGSFRVWDLRAFKDNSPVSDFK-YHTGPITSIEWNPYEESQVIVSS--SDD 408
Query: 252 QNHLLIASVQLPNEDAQFDASNYDTDKGDF 281
Q + I L + +F +N + D DF
Sbjct: 409 Q--VTIWDFSLEEDTEEFTNANANPDD-DF 435
>UNIPROTKB|E2RBY0 [details] [associations]
symbol:GRWD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
CTD:83743 GeneTree:ENSGT00550000075124 KO:K14848 OMA:NRLMMLR
EMBL:AAEX03000823 RefSeq:XP_854878.1 ProteinModelPortal:E2RBY0
Ensembl:ENSCAFT00000006420 GeneID:612058 KEGG:cfa:612058
NextBio:20897592 Uniprot:E2RBY0
Length = 440
Score = 126 (49.4 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 33/106 (31%), Positives = 51/106 (48%)
Query: 131 GYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRV--IDAKTIFTGHTAVVEVRYGLS 188
G+ L W+P ++G LL+ I LW TP + +D + F GHT VE L
Sbjct: 211 GFALDWSPRVSGRLLTGDCQKNIHLW----TPTDGGSWHVDQRP-FMGHTRSVE---DLQ 262
Query: 189 WNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVV 234
W+P+ + S S D +I +WDI A P + ++ + G V+
Sbjct: 263 WSPTEDTVFASCSADASIRIWDIRAAPSKACMLTTTSAHDGDVNVI 308
>UNIPROTKB|E1BWN6 [details] [associations]
symbol:CORO2A "Coronin" species:9031 "Gallus gallus"
[GO:0051015 "actin filament binding" evidence=IEA] [GO:0017053
"transcriptional repressor complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0017053 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00550000074317 InterPro:IPR015505
InterPro:IPR015048 InterPro:IPR015049 PANTHER:PTHR10856
Pfam:PF08953 Pfam:PF08954 CTD:7464 OMA:LLQMFYR EMBL:AADN02060086
EMBL:AADN02060087 IPI:IPI00680995 RefSeq:XP_424946.3
UniGene:Gga.52392 Ensembl:ENSGALT00000002987 GeneID:427373
KEGG:gga:427373 Uniprot:E1BWN6
Length = 522
Score = 127 (49.8 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 36/141 (25%), Positives = 64/141 (45%)
Query: 134 LSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGL-SWNPS 192
+ WNP + + S S+D T+ +WDI + K GH R GL W+P+
Sbjct: 88 IKWNPFNDFVIASCSEDATVKIWDIPKHLLTKNITTPKKELLGHAR----RVGLIEWHPT 143
Query: 193 LNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDYSIHR--LILGTHTSD 250
N L S+ D+ I +W+++ +E+ + + I H VV S + +L T D
Sbjct: 144 ANNILFSSGHDYKIMIWNLDT--REDVLSNPVKILDAHKDVVLSMSFNTDGSLLATACRD 201
Query: 251 EQNHLLIASVQLPNEDAQFDA 271
++ L+ + ++A + A
Sbjct: 202 KKIRLIDPRARTVLQEASYKA 222
>UNIPROTKB|F1RL85 [details] [associations]
symbol:GRWD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
GeneTree:ENSGT00550000075124 KO:K14848 OMA:NRLMMLR EMBL:FP102301
RefSeq:XP_003127319.1 UniGene:Ssc.24214 Ensembl:ENSSSCT00000003475
GeneID:100521273 KEGG:ssc:100521273 Uniprot:F1RL85
Length = 445
Score = 126 (49.4 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 32/104 (30%), Positives = 48/104 (46%)
Query: 131 GYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWN 190
G+ L W+P + G LL+ I LW T + +D + F GHT VE L W+
Sbjct: 216 GFALDWSPRVPGRLLTGDCQKNIHLW--TPTDSGSWHVDQRP-FVGHTRSVE---DLQWS 269
Query: 191 PSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVV 234
P+ + S S D +I +WDI A P + ++ G V+
Sbjct: 270 PTEDTVFASCSADASIRIWDIRAAPSKACMLTTPAAHNGDVNVI 313
>MGI|MGI:2183448 [details] [associations]
symbol:Coro6 "coronin 6" species:10090 "Mus musculus"
[GO:0015629 "actin cytoskeleton" evidence=IBA] [GO:0030036 "actin
cytoskeleton organization" evidence=IBA] [GO:0051015 "actin
filament binding" evidence=IBA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:2183448 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0015629 eggNOG:COG2319 GO:GO:0051015 EMBL:AL607072
GeneTree:ENSGT00550000074317 HOVERGEN:HBG059978 InterPro:IPR015505
InterPro:IPR015048 InterPro:IPR015049 PANTHER:PTHR10856
Pfam:PF08953 Pfam:PF08954 CTD:84940 ChiTaRS:CORO6 EMBL:AB070894
EMBL:AB070895 EMBL:AB070896 EMBL:AK158179 IPI:IPI00120764
IPI:IPI00263646 IPI:IPI00648746 IPI:IPI00974745 RefSeq:NP_624354.1
RefSeq:NP_624355.1 RefSeq:NP_624356.1 UniGene:Mm.33477
ProteinModelPortal:Q920M5 SMR:Q920M5 PhosphoSite:Q920M5
PaxDb:Q920M5 PRIDE:Q920M5 Ensembl:ENSMUST00000021190
Ensembl:ENSMUST00000079770 Ensembl:ENSMUST00000102493
Ensembl:ENSMUST00000108390 Ensembl:ENSMUST00000108391 GeneID:216961
KEGG:mmu:216961 UCSC:uc007kgq.1 UCSC:uc007kgr.1 UCSC:uc007kgs.1
OMA:PFYDADS NextBio:375460 Bgee:Q920M5 CleanEx:MM_CORO6
Genevestigator:Q920M5 GermOnline:ENSMUSG00000020836 Uniprot:Q920M5
Length = 471
Score = 126 (49.4 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 35/110 (31%), Positives = 54/110 (49%)
Query: 108 GGNVQLP-NEDAQFDASNYDTDKGGYG----LSWNPSLNGYLLSASDDHTICLWDI-NAT 161
G + LP + + D NY G G + W P + + SASDD T+ +W I + T
Sbjct: 57 GAFIVLPLAKTGRVD-KNYPLVTGHTGPVLDIDWCPHNDNVIASASDDTTVMVWQIPDYT 115
Query: 162 PKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDI 211
P N + + GH+ V + LSW+P+ LLSA D+ I +W++
Sbjct: 116 PVRN-ITEPVITLEGHSKRVGI---LSWHPTARNVLLSAGGDNVIIIWNV 161
>UNIPROTKB|Q6QEF8 [details] [associations]
symbol:CORO6 "Coronin-6" species:9606 "Homo sapiens"
[GO:0015629 "actin cytoskeleton" evidence=IBA] [GO:0030036 "actin
cytoskeleton organization" evidence=IBA] [GO:0051015 "actin
filament binding" evidence=IBA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0015629 eggNOG:COG2319
GO:GO:0051015 EMBL:AC104564 HOGENOM:HOG000166356 HOVERGEN:HBG059978
InterPro:IPR015505 InterPro:IPR015048 InterPro:IPR015049
PANTHER:PTHR10856 Pfam:PF08953 Pfam:PF08954 HSSP:O89053
EMBL:AF193039 EMBL:AF447884 EMBL:AF447885 EMBL:AY545070
EMBL:AK027777 EMBL:AK096431 EMBL:BC064514 IPI:IPI00034860
IPI:IPI00783124 IPI:IPI00789933 IPI:IPI00791485 IPI:IPI00903139
RefSeq:NP_116243.2 UniGene:Hs.143046 ProteinModelPortal:Q6QEF8
SMR:Q6QEF8 STRING:Q6QEF8 PhosphoSite:Q6QEF8 DMDM:119369490
PaxDb:Q6QEF8 PRIDE:Q6QEF8 DNASU:84940 Ensembl:ENST00000345068
Ensembl:ENST00000388767 Ensembl:ENST00000445145
Ensembl:ENST00000456796 GeneID:84940 KEGG:hsa:84940 UCSC:uc002hel.2
UCSC:uc002hem.3 CTD:84940 GeneCards:GC17M027941 H-InvDB:HIX0013675
HGNC:HGNC:21356 HPA:HPA021556 neXtProt:NX_Q6QEF8
PharmGKB:PA134869901 ChiTaRS:CORO6 GenomeRNAi:84940 NextBio:75402
ArrayExpress:Q6QEF8 Bgee:Q6QEF8 CleanEx:HS_CORO6
Genevestigator:Q6QEF8 GermOnline:ENSG00000167549 Uniprot:Q6QEF8
Length = 472
Score = 126 (49.4 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 28/79 (35%), Positives = 43/79 (54%)
Query: 134 LSWNPSLNGYLLSASDDHTICLWDI-NATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPS 192
+ W P + + SASDD TI +W I + TP N + + GH+ V + LSW+P+
Sbjct: 87 IDWCPHNDNVIASASDDTTIMVWQIPDYTPMRN-ITEPIITLEGHSKRVGI---LSWHPT 142
Query: 193 LNGYLLSASDDHTICLWDI 211
LLSA D+ I +W++
Sbjct: 143 ARNVLLSAGGDNVIIIWNV 161
>RGD|708560 [details] [associations]
symbol:Coro6 "coronin 6" species:10116 "Rattus norvegicus"
[GO:0015629 "actin cytoskeleton" evidence=IBA] [GO:0030036 "actin
cytoskeleton organization" evidence=IBA] [GO:0051015 "actin
filament binding" evidence=IBA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:708560 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0015629 eggNOG:COG2319 GO:GO:0051015
GeneTree:ENSGT00550000074317 HOGENOM:HOG000166356
HOVERGEN:HBG059978 OrthoDB:EOG4RNB8C InterPro:IPR015505
InterPro:IPR015048 InterPro:IPR015049 PANTHER:PTHR10856
Pfam:PF08953 Pfam:PF08954 CTD:84940 OMA:PFYDADS EMBL:AF140359
EMBL:BC098656 IPI:IPI00200600 RefSeq:NP_620815.2 UniGene:Rn.28432
ProteinModelPortal:Q920J3 SMR:Q920J3 PhosphoSite:Q920J3
PRIDE:Q920J3 Ensembl:ENSRNOT00000019759 GeneID:245982
KEGG:rno:245982 InParanoid:Q920J3 NextBio:623280
ArrayExpress:Q920J3 Genevestigator:Q920J3
GermOnline:ENSRNOG00000014496 Uniprot:Q920J3
Length = 472
Score = 126 (49.4 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 35/110 (31%), Positives = 54/110 (49%)
Query: 108 GGNVQLP-NEDAQFDASNYDTDKGGYG----LSWNPSLNGYLLSASDDHTICLWDI-NAT 161
G + LP + + D NY G G + W P + + SASDD T+ +W I + T
Sbjct: 57 GAFIVLPLAKTGRVD-KNYPLVTGHTGPVLDIDWCPHNDNVIASASDDTTVMVWQIPDYT 115
Query: 162 PKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDI 211
P N + + GH+ V + LSW+P+ LLSA D+ I +W++
Sbjct: 116 PVRN-ITEPVITLEGHSKRVGI---LSWHPTARNVLLSAGGDNVIIIWNV 161
>GENEDB_PFALCIPARUM|PFL2460w [details] [associations]
symbol:PFL2460w "coronin" species:5833
"Plasmodium falciparum" [GO:0006928 "cellular component movement"
evidence=ISS] [GO:0000910 "cytokinesis" evidence=ISS] [GO:0007017
"microtubule-based process" evidence=ISS] [GO:0003779 "actin
binding" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0003779 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006928 GO:GO:0000910
EMBL:AE014188 GO:GO:0007017 InterPro:IPR015505 InterPro:IPR015048
InterPro:IPR015049 PANTHER:PTHR10856 Pfam:PF08953 Pfam:PF08954
RefSeq:XP_001350896.1 ProteinModelPortal:Q8I4S2 PRIDE:Q8I4S2
EnsemblProtists:PFL2460w:mRNA GeneID:811544 KEGG:pfa:PFL2460w
EuPathDB:PlasmoDB:PF3D7_1251200 OMA:CEDVEIC ProtClustDB:PTZ00420
Uniprot:Q8I4S2
Length = 602
Score = 125 (49.1 bits), Expect = 0.00011, P = 0.00011
Identities = 31/85 (36%), Positives = 47/85 (55%)
Query: 134 LSWNPSLNGYLLSASDDHTICLWDINATPKE-NRVIDAKTIFTGHTAVVEVRYGLSWNPS 192
LS+NP + L S S+D +I +W+I + N V D I GH V + LSWNP
Sbjct: 80 LSFNPCYSEILASCSEDMSIRIWEIRHEDENVNEVKDPLCILNGHKKKVNI---LSWNP- 135
Query: 193 LNGYLLSASD-DHTICLWDINATPK 216
+N ++LS++ D ++ +WDI K
Sbjct: 136 MNYFILSSTSFDSSVNIWDIENEKK 160
>UNIPROTKB|Q8I4S2 [details] [associations]
symbol:PFL2460w "Coronin" species:36329 "Plasmodium
falciparum 3D7" [GO:0000910 "cytokinesis" evidence=ISS] [GO:0003779
"actin binding" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0006928 "cellular component movement"
evidence=ISS] [GO:0007017 "microtubule-based process" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0003779 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006928 GO:GO:0000910 EMBL:AE014188
GO:GO:0007017 InterPro:IPR015505 InterPro:IPR015048
InterPro:IPR015049 PANTHER:PTHR10856 Pfam:PF08953 Pfam:PF08954
RefSeq:XP_001350896.1 ProteinModelPortal:Q8I4S2 PRIDE:Q8I4S2
EnsemblProtists:PFL2460w:mRNA GeneID:811544 KEGG:pfa:PFL2460w
EuPathDB:PlasmoDB:PF3D7_1251200 OMA:CEDVEIC ProtClustDB:PTZ00420
Uniprot:Q8I4S2
Length = 602
Score = 125 (49.1 bits), Expect = 0.00011, P = 0.00011
Identities = 31/85 (36%), Positives = 47/85 (55%)
Query: 134 LSWNPSLNGYLLSASDDHTICLWDINATPKE-NRVIDAKTIFTGHTAVVEVRYGLSWNPS 192
LS+NP + L S S+D +I +W+I + N V D I GH V + LSWNP
Sbjct: 80 LSFNPCYSEILASCSEDMSIRIWEIRHEDENVNEVKDPLCILNGHKKKVNI---LSWNP- 135
Query: 193 LNGYLLSASD-DHTICLWDINATPK 216
+N ++LS++ D ++ +WDI K
Sbjct: 136 MNYFILSSTSFDSSVNIWDIENEKK 160
>UNIPROTKB|F1LMV9 [details] [associations]
symbol:Coro2b "Coronin" species:10116 "Rattus norvegicus"
[GO:0016020 "membrane" evidence=IEA] [GO:0030036 "actin
cytoskeleton organization" evidence=IEA] [GO:0051015 "actin
filament binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GeneTree:ENSGT00550000074317
InterPro:IPR015505 InterPro:IPR015048 InterPro:IPR015049
PANTHER:PTHR10856 Pfam:PF08953 Pfam:PF08954 IPI:IPI00373332
Ensembl:ENSRNOT00000020951 RGD:1561953 ArrayExpress:F1LMV9
Uniprot:F1LMV9
Length = 480
Score = 123 (48.4 bits), Expect = 0.00013, P = 0.00013
Identities = 36/137 (26%), Positives = 67/137 (48%)
Query: 95 DAQFDASNYDTDKGGN-VQLPNEDAQFDASNYDTDKGGYG----LSWNPSLNGYLLSASD 149
+A+F A ++ GG+ + +P E NY G G + WNP ++ + S S+
Sbjct: 49 NARFLAIVTESAGGGSFLVIPLEQTGRIEPNYPKVCGHQGNVLDIKWNPFIDNIIASCSE 108
Query: 150 DHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGL-SWNPSLNGYLLSASDDHTICL 208
D ++ +W+I + + +A GH+ R GL W+P+ N L SA D+ + +
Sbjct: 109 DTSVRIWEIPEGGLKRNMTEALLELHGHSR----RVGLVEWHPTTNNILFSAGYDYKVLI 164
Query: 209 WDINATPKENRVIDAKT 225
W+++ + ++ID T
Sbjct: 165 WNLDIG-EPVKMIDCHT 180
>MGI|MGI:2444283 [details] [associations]
symbol:Coro2b "coronin, actin binding protein, 2B"
species:10090 "Mus musculus" [GO:0003779 "actin binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IBA] [GO:0030036 "actin cytoskeleton organization"
evidence=IBA] [GO:0051015 "actin filament binding" evidence=IBA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2444283 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036 GO:GO:0015629
eggNOG:COG2319 GO:GO:0051015 GeneTree:ENSGT00550000074317
HOGENOM:HOG000166356 HOVERGEN:HBG059978 InterPro:IPR015505
InterPro:IPR015048 InterPro:IPR015049 PANTHER:PTHR10856
Pfam:PF08953 Pfam:PF08954 CTD:10391 OMA:REHCFDG OrthoDB:EOG45QHD0
EMBL:AK047527 EMBL:AK087414 EMBL:BC062649 IPI:IPI00221725
RefSeq:NP_780693.2 UniGene:Mm.335229 ProteinModelPortal:Q8BH44
SMR:Q8BH44 PhosphoSite:Q8BH44 PaxDb:Q8BH44 PRIDE:Q8BH44
Ensembl:ENSMUST00000048043 GeneID:235431 KEGG:mmu:235431
UCSC:uc009qaj.1 InParanoid:Q8BH44 NextBio:382660 Bgee:Q8BH44
CleanEx:MM_CORO2B Genevestigator:Q8BH44
GermOnline:ENSMUSG00000041729 Uniprot:Q8BH44
Length = 480
Score = 122 (48.0 bits), Expect = 0.00017, P = 0.00017
Identities = 36/137 (26%), Positives = 67/137 (48%)
Query: 95 DAQFDASNYDTDKGGN-VQLPNEDAQFDASNYDTDKGGYG----LSWNPSLNGYLLSASD 149
+A+F A ++ GG+ + +P E NY G G + WNP ++ + S S+
Sbjct: 49 NARFLAIVTESAGGGSFLVIPLEQTGRIEPNYPKVCGHQGNVLDIKWNPFIDNIIASCSE 108
Query: 150 DHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGL-SWNPSLNGYLLSASDDHTICL 208
D ++ +W+I + + +A GH+ R GL W+P+ N L SA D+ + +
Sbjct: 109 DTSVRIWEIPDGGLKRNMTEALLELHGHSR----RVGLVEWHPTTNNILFSAGYDYKVLI 164
Query: 209 WDINATPKENRVIDAKT 225
W+++ + ++ID T
Sbjct: 165 WNLDIG-EPVKMIDCHT 180
>UNIPROTKB|E1C2B6 [details] [associations]
symbol:E1C2B6 "Coronin" species:9031 "Gallus gallus"
[GO:0016020 "membrane" evidence=IEA] [GO:0030036 "actin
cytoskeleton organization" evidence=IEA] [GO:0051015 "actin
filament binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00550000074317 InterPro:IPR015505
InterPro:IPR015048 InterPro:IPR015049 PANTHER:PTHR10856
Pfam:PF08953 Pfam:PF08954 OMA:REHCFDG EMBL:AADN02038892
EMBL:AADN02038893 IPI:IPI00583868 Ensembl:ENSGALT00000013051
Uniprot:E1C2B6
Length = 481
Score = 122 (48.0 bits), Expect = 0.00017, P = 0.00017
Identities = 36/137 (26%), Positives = 66/137 (48%)
Query: 95 DAQFDASNYDTDKGGN-VQLPNEDAQFDASNYDTDKGGYG----LSWNPSLNGYLLSASD 149
+A+F A ++ GG+ + +P E NY G G + WNP + + S S+
Sbjct: 44 NARFLAIVTESAGGGSFLVIPLEQTGRIEPNYPKVCGHQGNVLDIKWNPFIENIIASCSE 103
Query: 150 DHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGL-SWNPSLNGYLLSASDDHTICL 208
D ++ +W+I + + +A GH+ R GL W+P+ N L SA D+ + +
Sbjct: 104 DTSVRIWEIPEGGLKRNMTEAVLELYGHSR----RVGLVEWHPTTNNILFSAGYDYKVLI 159
Query: 209 WDINATPKENRVIDAKT 225
W+++ + ++ID T
Sbjct: 160 WNLDIG-EPVKMIDCHT 175
>FB|FBgn0022786 [details] [associations]
symbol:Hira "Hira" species:7227 "Drosophila melanogaster"
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=IMP] [GO:0035041 "sperm chromatin decondensation"
evidence=IMP] [GO:0001673 "male germ cell nucleus" evidence=IDA]
[GO:0035042 "fertilization, exchange of chromosomal proteins"
evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006336 "DNA
replication-independent nucleosome assembly" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR011494
InterPro:IPR015943 InterPro:IPR019015 Pfam:PF00400 Pfam:PF07569
Pfam:PF09453 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AE014298 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0003682 GO:GO:0001673
InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0006336 GO:GO:0035042
KO:K11293 GeneTree:ENSGT00550000074919 CTD:7290 EMBL:AF031081
EMBL:AJ222709 EMBL:AF071881 EMBL:AY069414 EMBL:BT016167 PIR:A59246
RefSeq:NP_572401.2 UniGene:Dm.2141 ProteinModelPortal:O17468
SMR:O17468 IntAct:O17468 STRING:O17468 PaxDb:O17468
EnsemblMetazoa:FBtr0071070 GeneID:31680 KEGG:dme:Dmel_CG12153
FlyBase:FBgn0022786 InParanoid:O17468 OMA:KECKSER OrthoDB:EOG40VT4J
PhylomeDB:O17468 ChiTaRS:HIRA GenomeRNAi:31680 NextBio:774799
Bgee:O17468 GermOnline:CG12153 Uniprot:O17468
Length = 1047
Score = 126 (49.4 bits), Expect = 0.00017, P = 0.00017
Identities = 31/77 (40%), Positives = 47/77 (61%)
Query: 134 LSWNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSL 193
L+W+P+ + YL S S D+T+ +WD A P + V K GHT +V+ G+SW+P L
Sbjct: 135 LAWSPN-DVYLASCSIDNTVIIWDAQAFP--HSVATLK----GHTGLVK---GVSWDP-L 183
Query: 194 NGYLLSASDDHTICLWD 210
+L S SDD +I +W+
Sbjct: 184 GRFLASQSDDRSIKIWN 200
>UNIPROTKB|G5E5F8 [details] [associations]
symbol:CORO2B "Coronin" species:9913 "Bos taurus"
[GO:0051015 "actin filament binding" evidence=IEA] [GO:0030036
"actin cytoskeleton organization" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00550000074317 InterPro:IPR015505
InterPro:IPR015048 InterPro:IPR015049 PANTHER:PTHR10856
Pfam:PF08953 Pfam:PF08954 OMA:REHCFDG EMBL:DAAA02027932
EMBL:DAAA02027933 EMBL:DAAA02027934 EMBL:DAAA02027935
EMBL:DAAA02027936 Ensembl:ENSBTAT00000016845 Uniprot:G5E5F8
Length = 443
Score = 121 (47.7 bits), Expect = 0.00019, P = 0.00019
Identities = 33/124 (26%), Positives = 61/124 (49%)
Query: 95 DAQFDASNYDTDKGGN-VQLPNEDAQFDASNYDTDKGGYG----LSWNPSLNGYLLSASD 149
+A+F A ++ GG+ + +P E NY G G + WNP ++ + S S+
Sbjct: 49 NARFLAIVTESAGGGSFLVIPLEQTGRIEPNYPKVCGHQGNVLDIKWNPFIDNIIASCSE 108
Query: 150 DHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGL-SWNPSLNGYLLSASDDHTICL 208
D ++ +W+I + + +A GH+ R GL W+P+ N L SA D+ + +
Sbjct: 109 DTSVRIWEIPEGGLKRNMTEALLELHGHSR----RVGLVEWHPTTNNILFSAGYDYKVLI 164
Query: 209 WDIN 212
W+++
Sbjct: 165 WNLD 168
>RGD|1310649 [details] [associations]
symbol:Grwd1 "glutamate-rich WD repeat containing 1"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310649 GO:GO:0005737
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 CTD:83743 HOGENOM:HOG000036730
HOVERGEN:HBG051847 KO:K14848 OrthoDB:EOG4CG084 EMBL:BC083883
IPI:IPI00367307 RefSeq:NP_001012067.1 UniGene:Rn.33523
ProteinModelPortal:Q5XI13 STRING:Q5XI13 PRIDE:Q5XI13 GeneID:308592
KEGG:rno:308592 UCSC:RGD:1310649 NextBio:659230 ArrayExpress:Q5XI13
Genevestigator:Q5XI13 GermOnline:ENSRNOG00000021058 Uniprot:Q5XI13
Length = 445
Score = 121 (47.7 bits), Expect = 0.00019, P = 0.00019
Identities = 33/106 (31%), Positives = 49/106 (46%)
Query: 131 GYGLSWNPSLNGYLLSASDDHTICLWDINATPKENRV--IDAKTIFTGHTAVVEVRYGLS 188
G+ L W+P + G LL+ I LW TP + +D + F GHT VE L
Sbjct: 216 GFALDWSPRVPGRLLTGDCQKNIHLW----TPTDGGSWNVDQRP-FVGHTRSVE---DLQ 267
Query: 189 WNPSLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVV 234
W+P+ + S S D +I +WDI A P + ++ G V+
Sbjct: 268 WSPTEDTVFASCSADASIRIWDIRAAPGKACMLTTAAAHDGDVNVI 313
>UNIPROTKB|E2REL6 [details] [associations]
symbol:CORO2B "Coronin" species:9615 "Canis lupus
familiaris" [GO:0051015 "actin filament binding" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GeneTree:ENSGT00550000074317
InterPro:IPR015505 InterPro:IPR015048 InterPro:IPR015049
PANTHER:PTHR10856 Pfam:PF08953 Pfam:PF08954 CTD:10391 OMA:REHCFDG
EMBL:AAEX03016248 RefSeq:XP_544743.3 Ensembl:ENSCAFT00000027724
GeneID:487618 KEGG:cfa:487618 Uniprot:E2REL6
Length = 475
Score = 121 (47.7 bits), Expect = 0.00021, P = 0.00021
Identities = 33/124 (26%), Positives = 61/124 (49%)
Query: 95 DAQFDASNYDTDKGGN-VQLPNEDAQFDASNYDTDKGGYG----LSWNPSLNGYLLSASD 149
+A+F A ++ GG+ + +P E NY G G + WNP ++ + S S+
Sbjct: 44 NARFLAIVTESAGGGSFLVIPLEQTGRIEPNYPKVCGHQGNVLDIKWNPFIDNIIASCSE 103
Query: 150 DHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGL-SWNPSLNGYLLSASDDHTICL 208
D ++ +W+I + + +A GH+ R GL W+P+ N L SA D+ + +
Sbjct: 104 DTSVRIWEIPEGGLKRNMTEALLELHGHSR----RVGLVEWHPTTNNILFSAGYDYKVLI 159
Query: 209 WDIN 212
W+++
Sbjct: 160 WNLD 163
>UNIPROTKB|F1SJH0 [details] [associations]
symbol:CORO2B "Coronin" species:9823 "Sus scrofa"
[GO:0051015 "actin filament binding" evidence=IEA] [GO:0030036
"actin cytoskeleton organization" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00550000074317 InterPro:IPR015505
InterPro:IPR015048 InterPro:IPR015049 PANTHER:PTHR10856
Pfam:PF08953 Pfam:PF08954 OMA:REHCFDG EMBL:CU638841
Ensembl:ENSSSCT00000005474 Uniprot:F1SJH0
Length = 497
Score = 121 (47.7 bits), Expect = 0.00022, P = 0.00022
Identities = 33/124 (26%), Positives = 61/124 (49%)
Query: 95 DAQFDASNYDTDKGGN-VQLPNEDAQFDASNYDTDKGGYG----LSWNPSLNGYLLSASD 149
+A+F A ++ GG+ + +P E NY G G + WNP ++ + S S+
Sbjct: 44 NARFLAIVTESAGGGSFLVIPLEQTGRIEPNYPKVCGHQGNVLDIKWNPFIDNIIASCSE 103
Query: 150 DHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGL-SWNPSLNGYLLSASDDHTICL 208
D ++ +W+I + + +A GH+ R GL W+P+ N L SA D+ + +
Sbjct: 104 DTSVRIWEIPEGGLKRNMTEALLELHGHSR----RVGLVEWHPTTNNILFSAGYDYKVLI 159
Query: 209 WDIN 212
W+++
Sbjct: 160 WNLD 163
>UNIPROTKB|A6QLZ8 [details] [associations]
symbol:CORO6 "Coronin" species:9913 "Bos taurus"
[GO:0051015 "actin filament binding" evidence=ISS] [GO:0030036
"actin cytoskeleton organization" evidence=ISS] [GO:0015629 "actin
cytoskeleton" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0015629 eggNOG:COG2319
GO:GO:0051015 GeneTree:ENSGT00550000074317 HOGENOM:HOG000166356
HOVERGEN:HBG059978 InterPro:IPR015505 InterPro:IPR015048
InterPro:IPR015049 PANTHER:PTHR10856 Pfam:PF08953 Pfam:PF08954
CTD:84940 OMA:PFYDADS EMBL:DAAA02048621 EMBL:BC148144
IPI:IPI00685662 RefSeq:NP_001095752.1 UniGene:Bt.6619 SMR:A6QLZ8
Ensembl:ENSBTAT00000001490 GeneID:614661 KEGG:bta:614661
NextBio:20899219 Uniprot:A6QLZ8
Length = 431
Score = 120 (47.3 bits), Expect = 0.00023, P = 0.00023
Identities = 27/79 (34%), Positives = 43/79 (54%)
Query: 134 LSWNPSLNGYLLSASDDHTICLWDI-NATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPS 192
+ W P + + SASDD TI +W I + TP + + + GH+ V + LSW+P+
Sbjct: 87 IDWCPHNDNVIASASDDTTIMVWQIPDYTPVRS-ITEPIITLEGHSKRVGI---LSWHPT 142
Query: 193 LNGYLLSASDDHTICLWDI 211
LLSA D+ I +W++
Sbjct: 143 ARNVLLSAGGDNVIIIWNV 161
>ASPGD|ASPL0000003994 [details] [associations]
symbol:AN6160 species:162425 "Emericella nidulans"
[GO:0005847 "mRNA cleavage and polyadenylation specificity factor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:2000045
"regulation of G1/S transition of mitotic cell cycle" evidence=IEA]
[GO:0000070 "mitotic sister chromatid segregation" evidence=IEA]
[GO:0031124 "mRNA 3'-end processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0007059 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319
GO:GO:0006397 EMBL:BN001301 EMBL:AACD01000105 KO:K15542
RefSeq:XP_663764.1 ProteinModelPortal:Q5AZX0 STRING:Q5AZX0
EnsemblFungi:CADANIAT00006850 GeneID:2870757 KEGG:ani:AN6160.2
HOGENOM:HOG000213918 OMA:RDICILR OrthoDB:EOG4QVGMD Uniprot:Q5AZX0
Length = 567
Score = 121 (47.7 bits), Expect = 0.00027, P = 0.00027
Identities = 49/160 (30%), Positives = 76/160 (47%)
Query: 100 ASNYDT--DKGG-NVQLPNED--AQFDASNYDTDKGGYGLSWNPSLNGYLLSASDDHTIC 154
A N++T DKG PN + D +++D + L+W+PS +L SASDD T+
Sbjct: 125 AFNFETVMDKGDVKYWRPNFNNVETIDDAHHDAVRD---LAWSPSDTKFL-SASDDTTLK 180
Query: 155 LWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDINAT 214
++D A R D T+ TGH V+ W+P+ G L+S S DH + WD
Sbjct: 181 IYDFTA-----RTCD--TVLTGHNWDVK---SCDWHPT-KGLLVSGSKDHQVKFWD---- 225
Query: 215 PKENRVIDAKTIFTGH--TAVVEDYS-IHRLILGTHTSDE 251
P+ R + T H T +S ++ +L T + D+
Sbjct: 226 PRTARCL---TTLHSHKNTVTATKFSRVNNNLLATSSRDQ 262
>UNIPROTKB|Q9UQ03 [details] [associations]
symbol:CORO2B "Coronin-2B" species:9606 "Homo sapiens"
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0003779 "actin binding"
evidence=NAS] [GO:0015629 "actin cytoskeleton" evidence=IBA;NAS]
[GO:0030036 "actin cytoskeleton organization" evidence=NAS;IBA]
[GO:0051015 "actin filament binding" evidence=IBA] [GO:0016020
"membrane" evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0016020 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0015629 eggNOG:COG2319 GO:GO:0051015 HOGENOM:HOG000166356
HOVERGEN:HBG059978 InterPro:IPR015505 InterPro:IPR015048
InterPro:IPR015049 PANTHER:PTHR10856 Pfam:PF08953 Pfam:PF08954
EMBL:AB010098 EMBL:AK289678 EMBL:AC090734 EMBL:AC105014
EMBL:BC026335 EMBL:AB023142 IPI:IPI00298912 IPI:IPI00940363
RefSeq:NP_001177385.1 RefSeq:NP_001177386.1 RefSeq:NP_006082.3
UniGene:Hs.551213 ProteinModelPortal:Q9UQ03 SMR:Q9UQ03
IntAct:Q9UQ03 MINT:MINT-1394971 STRING:Q9UQ03 PhosphoSite:Q9UQ03
DMDM:254763439 PaxDb:Q9UQ03 PRIDE:Q9UQ03 DNASU:10391
Ensembl:ENST00000261861 Ensembl:ENST00000540068
Ensembl:ENST00000543950 Ensembl:ENST00000566799 GeneID:10391
KEGG:hsa:10391 UCSC:uc002arj.4 CTD:10391 GeneCards:GC15P068871
HGNC:HGNC:2256 HPA:HPA017960 MIM:605002 neXtProt:NX_Q9UQ03
PharmGKB:PA26772 InParanoid:Q9UQ03 OMA:REHCFDG OrthoDB:EOG45QHD0
ChiTaRS:CORO2B GenomeRNAi:10391 NextBio:39366 ArrayExpress:Q9UQ03
Bgee:Q9UQ03 CleanEx:HS_CORO2B Genevestigator:Q9UQ03
GermOnline:ENSG00000103647 Uniprot:Q9UQ03
Length = 480
Score = 120 (47.3 bits), Expect = 0.00028, P = 0.00028
Identities = 33/124 (26%), Positives = 60/124 (48%)
Query: 108 GGN-VQLPNEDAQFDASNYDTDKGGYG----LSWNPSLNGYLLSASDDHTICLWDINATP 162
GG+ + +P E NY G G + WNP ++ + S S+D ++ +W+I
Sbjct: 62 GGSFLVIPLEQTGRIEPNYPKVCGHQGNVLDIKWNPFIDNIIASCSEDTSVRIWEIPEGG 121
Query: 163 KENRVIDAKTIFTGHTAVVEVRYGL-SWNPSLNGYLLSASDDHTICLWDINATPKENRVI 221
+ + +A GH+ R GL W+P+ N L SA D+ + +W+++ + ++I
Sbjct: 122 LKRNMTEALLELHGHSR----RVGLVEWHPTTNNILFSAGYDYKVLIWNLDVG-EPVKMI 176
Query: 222 DAKT 225
D T
Sbjct: 177 DCHT 180
>UNIPROTKB|F8VSA4 [details] [associations]
symbol:CORO1C "Coronin" species:9606 "Homo sapiens"
[GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0030036 "actin
cytoskeleton organization" evidence=IEA] [GO:0051015 "actin
filament binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR015505 InterPro:IPR015048
PANTHER:PTHR10856 Pfam:PF08953 HGNC:HGNC:2254 ChiTaRS:CORO1C
EMBL:AC007569 IPI:IPI01021090 ProteinModelPortal:F8VSA4 SMR:F8VSA4
Ensembl:ENST00000546571 ArrayExpress:F8VSA4 Bgee:F8VSA4
Uniprot:F8VSA4
Length = 162
Score = 105 (42.0 bits), Expect = 0.00071, P = 0.00071
Identities = 30/109 (27%), Positives = 52/109 (47%)
Query: 108 GGNVQLP-NEDAQFDASNYDTDKGGYG----LSWNPSLNGYLLSASDDHTICLWDINATP 162
G + LP ++ + D S Y T G G + W P + + S S+D T+ +W I
Sbjct: 56 GAFLVLPLHKTGRIDKS-YPTVCGHTGPVLDIDWCPHNDQVIASGSEDCTVMVWQIPENG 114
Query: 163 KENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDI 211
+ + I GH+ V + ++W+P+ LLSA D+ I +W++
Sbjct: 115 LTLSLTEPVVILEGHSKRVGI---VAWHPTARNVLLSAGCDNAIIIWNV 160
>ASPGD|ASPL0000069856 [details] [associations]
symbol:AN7205 species:162425 "Emericella nidulans"
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0042254 "ribosome biogenesis" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001304 InterPro:IPR022052
Pfam:PF12265 HOGENOM:HOG000036730 OMA:NRLMMLR
EnsemblFungi:CADANIAT00000249 Uniprot:C8VD17
Length = 492
Score = 102 (41.0 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 30/92 (32%), Positives = 44/92 (47%)
Query: 131 GYGLSWNPSLN--GYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLS 188
GY L W+P L+ G LL+ +D I + T V D + F GH + VE L
Sbjct: 258 GYALDWSP-LHPLGKLLTGDNDGLIYV--TTRTEGGGWVTDTRA-FRGHASSVEE---LQ 310
Query: 189 WNPSLNGYLLSASDDHTICLWDINATPKENRV 220
W+P+ SAS D T+ +WD+ + + V
Sbjct: 311 WSPNEKNVFASASSDGTVKVWDVRSKSRSPAV 342
Score = 57 (25.1 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 22/96 (22%), Positives = 42/96 (43%)
Query: 28 PFLYDLVMTHALEWPSLTAQWLPDVTSVQLPNEDAQFDASNYDTDKGTHTSD---EQNHL 84
P YD++ T + WP L+ D+ L + + A+ Y GT ++N L
Sbjct: 93 PSTYDMLHTLSTPWPCLSF----DIVRDTLGDNRKTYPATVYAVT-GTQAEGRRAKENEL 147
Query: 85 LIASV----QLPNEDAQFDASNYDTDKGGNVQLPNE 116
++ + ++ E+ S+ D D+GG L ++
Sbjct: 148 MVLKLSGLGKMERENETDSESDSDDDEGGEAILEHK 183
>UNIPROTKB|F8VRE9 [details] [associations]
symbol:CORO1C "Coronin" species:9606 "Homo sapiens"
[GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0030036 "actin
cytoskeleton organization" evidence=IEA] [GO:0051015 "actin
filament binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR015505 InterPro:IPR015048
PANTHER:PTHR10856 Pfam:PF08953 HGNC:HGNC:2254 ChiTaRS:CORO1C
EMBL:AC007569 IPI:IPI01020922 ProteinModelPortal:F8VRE9 SMR:F8VRE9
Ensembl:ENST00000551550 ArrayExpress:F8VRE9 Bgee:F8VRE9
Uniprot:F8VRE9
Length = 163
Score = 105 (42.0 bits), Expect = 0.00074, P = 0.00074
Identities = 30/109 (27%), Positives = 52/109 (47%)
Query: 108 GGNVQLP-NEDAQFDASNYDTDKGGYG----LSWNPSLNGYLLSASDDHTICLWDINATP 162
G + LP ++ + D S Y T G G + W P + + S S+D T+ +W I
Sbjct: 56 GAFLVLPLHKTGRIDKS-YPTVCGHTGPVLDIDWCPHNDQVIASGSEDCTVMVWQIPENG 114
Query: 163 KENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDI 211
+ + I GH+ V + ++W+P+ LLSA D+ I +W++
Sbjct: 115 LTLSLTEPVVILEGHSKRVGI---VAWHPTARNVLLSAGCDNAIIIWNV 160
>UNIPROTKB|F1NIQ7 [details] [associations]
symbol:CORO1C "Coronin" species:9031 "Gallus gallus"
[GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0030036 "actin
cytoskeleton organization" evidence=IEA] [GO:0051015 "actin
filament binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00550000074317 InterPro:IPR015505
InterPro:IPR015048 PANTHER:PTHR10856 Pfam:PF08953 EMBL:AADN02034974
EMBL:AADN02034968 EMBL:AADN02034969 EMBL:AADN02034970
EMBL:AADN02034971 EMBL:AADN02034972 EMBL:AADN02034973
IPI:IPI01017070 Ensembl:ENSGALT00000007836 ArrayExpress:F1NIQ7
Uniprot:F1NIQ7
Length = 200
Score = 108 (43.1 bits), Expect = 0.00093, P = 0.00093
Identities = 33/121 (27%), Positives = 57/121 (47%)
Query: 97 QFDASNYDTDKGGN-VQLP-NEDAQFDASNYDTDKGGYG----LSWNPSLNGYLLSASDD 150
+F A D GG + LP ++ + D S Y T G G + W P + + S S+D
Sbjct: 44 RFVAIIVDASGGGAFLVLPLHKTGRIDKS-YPTVCGHTGPVLDIDWCPHNDQVIASGSED 102
Query: 151 HTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWD 210
T+ +W I + + + GH+ V + ++W+P+ LLSA D+ I +W+
Sbjct: 103 CTVMVWQIPENGLTLSLTEPVVVLEGHSKRVGI---VAWHPTARNVLLSAGCDNAIIIWN 159
Query: 211 I 211
+
Sbjct: 160 V 160
>UNIPROTKB|F1NIQ6 [details] [associations]
symbol:CORO1C "Coronin" species:9031 "Gallus gallus"
[GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0030036 "actin
cytoskeleton organization" evidence=IEA] [GO:0051015 "actin
filament binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00550000074317 InterPro:IPR015505
InterPro:IPR015048 PANTHER:PTHR10856 Pfam:PF08953 EMBL:AADN02034974
EMBL:AADN02034968 EMBL:AADN02034969 EMBL:AADN02034970
EMBL:AADN02034971 EMBL:AADN02034972 EMBL:AADN02034973
IPI:IPI00587350 Ensembl:ENSGALT00000007837 ArrayExpress:F1NIQ6
Uniprot:F1NIQ6
Length = 201
Score = 108 (43.1 bits), Expect = 0.00095, P = 0.00095
Identities = 33/121 (27%), Positives = 57/121 (47%)
Query: 97 QFDASNYDTDKGGN-VQLP-NEDAQFDASNYDTDKGGYG----LSWNPSLNGYLLSASDD 150
+F A D GG + LP ++ + D S Y T G G + W P + + S S+D
Sbjct: 44 RFVAIIVDASGGGAFLVLPLHKTGRIDKS-YPTVCGHTGPVLDIDWCPHNDQVIASGSED 102
Query: 151 HTICLWDINATPKENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWD 210
T+ +W I + + + GH+ V + ++W+P+ LLSA D+ I +W+
Sbjct: 103 CTVMVWQIPENGLTLSLTEPVVVLEGHSKRVGI---VAWHPTARNVLLSAGCDNAIIIWN 159
Query: 211 I 211
+
Sbjct: 160 V 160
>UNIPROTKB|F8VTT6 [details] [associations]
symbol:CORO1C "Coronin" species:9606 "Homo sapiens"
[GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0030036 "actin
cytoskeleton organization" evidence=IEA] [GO:0051015 "actin
filament binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR015505 InterPro:IPR015048
PANTHER:PTHR10856 Pfam:PF08953 HGNC:HGNC:2254 ChiTaRS:CORO1C
EMBL:AC007569 IPI:IPI01021235 ProteinModelPortal:F8VTT6 SMR:F8VTT6
Ensembl:ENST00000550032 ArrayExpress:F8VTT6 Bgee:F8VTT6
Uniprot:F8VTT6
Length = 169
Score = 105 (42.0 bits), Expect = 0.00097, P = 0.00097
Identities = 30/109 (27%), Positives = 52/109 (47%)
Query: 108 GGNVQLP-NEDAQFDASNYDTDKGGYG----LSWNPSLNGYLLSASDDHTICLWDINATP 162
G + LP ++ + D S Y T G G + W P + + S S+D T+ +W I
Sbjct: 56 GAFLVLPLHKTGRIDKS-YPTVCGHTGPVLDIDWCPHNDQVIASGSEDCTVMVWQIPENG 114
Query: 163 KENRVIDAKTIFTGHTAVVEVRYGLSWNPSLNGYLLSASDDHTICLWDI 211
+ + I GH+ V + ++W+P+ LLSA D+ I +W++
Sbjct: 115 LTLSLTEPVVILEGHSKRVGI---VAWHPTARNVLLSAGCDNAIIIWNV 160
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.133 0.408 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 368 368 0.00085 117 3 11 23 0.46 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 93
No. of states in DFA: 617 (66 KB)
Total size of DFA: 270 KB (2138 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 34.00u 0.09s 34.09t Elapsed: 00:00:05
Total cpu time: 34.03u 0.09s 34.12t Elapsed: 00:00:05
Start: Thu Aug 15 17:26:53 2013 End: Thu Aug 15 17:26:58 2013