Your job contains 1 sequence.
>psy4580
MKSKLEERERDIKDLKILLRSKQEEIGEISVRKDLAESKLANAIRDKDYQEQKLKCVTNR
INQLEEVVDLKS
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy4580
(72 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
ZFIN|ZDB-GENE-050419-28 - symbol:dctn1b "dynactin 1b" spe... 113 2.3e-05 1
FB|FBgn0001108 - symbol:Gl "Glued" species:7227 "Drosophi... 111 4.3e-05 1
MGI|MGI:107745 - symbol:Dctn1 "dynactin 1" species:10090 ... 107 0.00012 1
ZFIN|ZDB-GENE-070117-2205 - symbol:dctn1a "dynactin 1a" s... 106 0.00014 1
UNIPROTKB|F1MIC9 - symbol:DCTN1 "Uncharacterized protein"... 106 0.00014 1
UNIPROTKB|D4A8U7 - symbol:Dctn1 "Dynactin subunit 1" spec... 106 0.00014 1
UNIPROTKB|Q14203 - symbol:DCTN1 "Dynactin subunit 1" spec... 106 0.00015 1
RGD|62038 - symbol:Dctn1 "dynactin 1" species:10116 "Ratt... 106 0.00015 1
UNIPROTKB|F1SNT8 - symbol:DCTN1 "Uncharacterized protein"... 106 0.00015 1
UNIPROTKB|P35458 - symbol:DCTN1 "Dynactin subunit 1" spec... 105 0.00018 1
>ZFIN|ZDB-GENE-050419-28 [details] [associations]
symbol:dctn1b "dynactin 1b" species:7955 "Danio
rerio" [GO:0060219 "camera-type eye photoreceptor cell
differentiation" evidence=IGI] ZFIN:ZDB-GENE-050419-28
InterPro:IPR022157 Pfam:PF12455 EMBL:CR556710 IPI:IPI00862401
ProteinModelPortal:F6PC33 Ensembl:ENSDART00000102411 OMA:CPKVVDI
Uniprot:F6PC33
Length = 1114
Score = 113 (44.8 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 25/61 (40%), Positives = 39/61 (63%)
Query: 4 KLEERERDIKDLKILLRSKQEEIGEISVRKDLAESKLANAIRDKDYQEQKLKCVTNRINQ 63
KLE+RE IK+LK L+ K EE+ E +VR L E KL +A +D D + +K++ + + +
Sbjct: 766 KLEDRETVIKELKKSLKIKGEELSEANVRLSLLEKKLDSASKDADERVEKIQAILDETDS 825
Query: 64 L 64
L
Sbjct: 826 L 826
>FB|FBgn0001108 [details] [associations]
symbol:Gl "Glued" species:7227 "Drosophila melanogaster"
[GO:0001709 "cell fate determination" evidence=IMP] [GO:0001751
"compound eye photoreceptor cell differentiation" evidence=IMP]
[GO:0016330 "second mitotic wave involved in compound eye
morphogenesis" evidence=IMP] [GO:0042051 "compound eye
photoreceptor development" evidence=IMP] [GO:0042052 "rhabdomere
development" evidence=IMP] [GO:0008090 "retrograde axon cargo
transport" evidence=IMP;NAS] [GO:0003777 "microtubule motor
activity" evidence=NAS] [GO:0005737 "cytoplasm" evidence=IDA;NAS]
[GO:0005869 "dynactin complex" evidence=ISS;NAS;TAS] [GO:0007018
"microtubule-based movement" evidence=ISS] [GO:0048477 "oogenesis"
evidence=NAS] [GO:0045502 "dynein binding" evidence=TAS]
[GO:0001754 "eye photoreceptor cell differentiation" evidence=IMP]
[GO:0051028 "mRNA transport" evidence=IMP] [GO:0034501 "protein
localization to kinetochore" evidence=IMP] [GO:0047497
"mitochondrion transport along microtubule" evidence=IMP]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0000776 "kinetochore"
evidence=IDA] [GO:0006886 "intracellular protein transport"
evidence=IMP] [GO:0051383 "kinetochore organization" evidence=IMP]
[GO:0051299 "centrosome separation" evidence=IMP] [GO:0051225
"spindle assembly" evidence=IMP] [GO:0031616 "spindle pole
centrosome" evidence=IDA] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0007052 "mitotic spindle organization"
evidence=IMP] [GO:0045198 "establishment of epithelial cell
apical/basal polarity" evidence=IDA] [GO:0007067 "mitosis"
evidence=IMP] [GO:0022008 "neurogenesis" evidence=IMP] [GO:0035011
"melanotic encapsulation of foreign target" evidence=IMP]
[GO:0035371 "microtubule plus end" evidence=IDA] InterPro:IPR000938
Pfam:PF01302 GO:GO:0005737 GO:GO:0006886 EMBL:AE014296
GO:GO:0000776 GO:GO:0007067 GO:GO:0007052 GO:GO:0051225
GO:GO:0048477 GO:GO:0005869 GO:GO:0008090 eggNOG:COG5244
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 GO:GO:0034501 GO:GO:0035371 GO:GO:0051028
GO:GO:0001709 GO:GO:0030286 GO:GO:0003774 GO:GO:0051383
GO:GO:0016330 GO:GO:0031616 GO:GO:0045502 GO:GO:0042052
GO:GO:0045198 GO:GO:0035011 GO:GO:0051299 GO:GO:0005828
GeneTree:ENSGT00700000104055 KO:K04648 InterPro:IPR022157
Pfam:PF12455 EMBL:J02932 EMBL:AY118377 EMBL:BT044559 PIR:A28313
RefSeq:NP_524061.1 UniGene:Dm.12980 ProteinModelPortal:P13496
SMR:P13496 DIP:DIP-21099N IntAct:P13496 MINT:MINT-342315
STRING:P13496 PaxDb:P13496 EnsemblMetazoa:FBtr0075756 GeneID:39536
KEGG:dme:Dmel_CG9206 UCSC:CG9206-RA CTD:39536 FlyBase:FBgn0001108
InParanoid:Q8MT52 OMA:HVYSRTP OrthoDB:EOG49P8DD PhylomeDB:P13496
ChiTaRS:OSTM1 GenomeRNAi:39536 NextBio:814157 Bgee:P13496
GermOnline:CG9206 GO:GO:0047497 Uniprot:P13496
Length = 1265
Score = 111 (44.1 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 22/55 (40%), Positives = 34/55 (61%)
Query: 1 MKSKLEERERDIKDLKILLRSKQEEIGEISVRKDLAESKLANAIRDKDYQEQKLK 55
+ + LE RE D+K LK+ + KQ E+ E+ +RKDLAE KL+ + ++ K K
Sbjct: 982 LAATLENREADVKQLKVAAKMKQNELSEMQIRKDLAEKKLSVLQNEYEHAVDKWK 1036
>MGI|MGI:107745 [details] [associations]
symbol:Dctn1 "dynactin 1" species:10090 "Mus musculus"
[GO:0000776 "kinetochore" evidence=ISO] [GO:0000922 "spindle pole"
evidence=ISO] [GO:0003774 "motor activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0005868 "cytoplasmic dynein
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=ISO]
[GO:0006810 "transport" evidence=IEA] [GO:0030286 "dynein complex"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IDA]
InterPro:IPR000938 MGI:MGI:107745 Pfam:PF01302 GO:GO:0005813
GO:GO:0031252 GO:GO:0000776 GO:GO:0006810 GO:GO:0000922
eggNOG:COG5244 GO:GO:0005874 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245 GO:GO:0003774
EMBL:AC160400 GeneTree:ENSGT00700000104055 GO:GO:0005868 CTD:1639
HOVERGEN:HBG004956 KO:K04648 InterPro:IPR022157 Pfam:PF12455
OMA:HVYSRTP HOGENOM:HOG000015352 ChiTaRS:DCTN1 EMBL:U60312
EMBL:AK157867 IPI:IPI00115663 IPI:IPI00857569 PIR:JC5368
RefSeq:NP_031861.2 UniGene:Mm.6919 ProteinModelPortal:O08788
SMR:O08788 IntAct:O08788 MINT:MINT-1847327 STRING:O08788
PhosphoSite:O08788 PaxDb:O08788 PRIDE:O08788
Ensembl:ENSMUST00000113918 Ensembl:ENSMUST00000113919 GeneID:13191
KEGG:mmu:13191 InParanoid:O08788 NextBio:283312 Bgee:O08788
CleanEx:MM_DCTN1 Genevestigator:O08788
GermOnline:ENSMUSG00000031865 Uniprot:O08788
Length = 1281
Score = 107 (42.7 bits), Expect = 0.00012, P = 0.00012
Identities = 26/68 (38%), Positives = 43/68 (63%)
Query: 4 KLEERERDIKDLKILLRSKQEEIGEISVRKDLAESKLANAIRDKDYQEQKLKCVTNRINQ 63
KLE+RE IK+LK L+ K EE+ E +VR L E KL +A +D D ++++ V R+++
Sbjct: 944 KLEDRETVIKELKKSLKIKGEELSEANVRLSLLEKKLDSAAKDAD---ERIEKVQTRLDE 1000
Query: 64 LEEVVDLK 71
+ ++ K
Sbjct: 1001 TQTLLRKK 1008
>ZFIN|ZDB-GENE-070117-2205 [details] [associations]
symbol:dctn1a "dynactin 1a" species:7955 "Danio
rerio" [GO:0045176 "apical protein localization" evidence=IMP]
[GO:0040023 "establishment of nucleus localization" evidence=IMP]
[GO:0060042 "retina morphogenesis in camera-type eye" evidence=IMP]
[GO:0048663 "neuron fate commitment" evidence=IMP] [GO:0010842
"retina layer formation" evidence=IGI;IMP] [GO:0060219 "camera-type
eye photoreceptor cell differentiation" evidence=IGI]
InterPro:IPR000938 Pfam:PF01302 ZFIN:ZDB-GENE-070117-2205
GO:GO:0010842 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 GO:GO:0040023 GO:GO:0048663
GO:GO:0045176 GeneTree:ENSGT00700000104055 InterPro:IPR022157
Pfam:PF12455 GO:GO:0060219 EMBL:CR926130 EMBL:CT030017
IPI:IPI00960481 Ensembl:ENSDART00000015410 Uniprot:E7F1E0
Length = 1226
Score = 106 (42.4 bits), Expect = 0.00014, P = 0.00014
Identities = 25/65 (38%), Positives = 41/65 (63%)
Query: 3 SKLEERERDIKDLKILLRSKQEEIGEISVRKDLAESKLANAIRDKDYQEQKLKC-VTNRI 61
+KLE+RE IK+LK L+ K EE+ E +VR L E KL + +D D + +K++ + +
Sbjct: 898 NKLEDRETVIKELKKSLKIKGEELSEANVRLSLLEKKLDTSTKDADERVEKIQTKLDEAL 957
Query: 62 NQLEE 66
N L++
Sbjct: 958 NTLKK 962
>UNIPROTKB|F1MIC9 [details] [associations]
symbol:DCTN1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031252 "cell leading edge" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] InterPro:IPR000938 Pfam:PF01302 GO:GO:0005813
GO:GO:0031252 GO:GO:0000776 GO:GO:0000922 GO:GO:0005874
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 GeneTree:ENSGT00700000104055 InterPro:IPR022157
Pfam:PF12455 OMA:HVYSRTP EMBL:DAAA02030327 IPI:IPI00718205
UniGene:Bt.4468 Ensembl:ENSBTAT00000006430 ArrayExpress:F1MIC9
Uniprot:F1MIC9
Length = 1239
Score = 106 (42.4 bits), Expect = 0.00014, P = 0.00014
Identities = 26/68 (38%), Positives = 42/68 (61%)
Query: 4 KLEERERDIKDLKILLRSKQEEIGEISVRKDLAESKLANAIRDKDYQEQKLKCVTNRINQ 63
KLE+RE IK+LK L+ K EE+ E +VR L E KL +A +D D ++++ V R+ +
Sbjct: 907 KLEDRETVIKELKKSLKIKGEELSEANVRLSLLEKKLDSAAKDAD---ERIEKVQTRLEE 963
Query: 64 LEEVVDLK 71
+ ++ K
Sbjct: 964 TQTLLRKK 971
>UNIPROTKB|D4A8U7 [details] [associations]
symbol:Dctn1 "Dynactin subunit 1" species:10116 "Rattus
norvegicus" [GO:0000776 "kinetochore" evidence=IEA] [GO:0000922
"spindle pole" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] InterPro:IPR000938 Pfam:PF01302 RGD:62038
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 GeneTree:ENSGT00700000104055 InterPro:IPR022157
Pfam:PF12455 IPI:IPI00951875 Ensembl:ENSRNOT00000068102
ArrayExpress:D4A8U7 Uniprot:D4A8U7
Length = 1239
Score = 106 (42.4 bits), Expect = 0.00014, P = 0.00014
Identities = 26/68 (38%), Positives = 42/68 (61%)
Query: 4 KLEERERDIKDLKILLRSKQEEIGEISVRKDLAESKLANAIRDKDYQEQKLKCVTNRINQ 63
KLE+RE IK+LK L+ K EE+ E +VR L E KL +A +D D ++++ V R+ +
Sbjct: 907 KLEDRETVIKELKKSLKIKGEELSEANVRLSLLEKKLDSAAKDAD---ERIEKVQTRLEE 963
Query: 64 LEEVVDLK 71
+ ++ K
Sbjct: 964 TQTLLRKK 971
>UNIPROTKB|Q14203 [details] [associations]
symbol:DCTN1 "Dynactin subunit 1" species:9606 "Homo
sapiens" [GO:0003774 "motor activity" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0008219 "cell death" evidence=IEA]
[GO:0030286 "dynein complex" evidence=IEA] [GO:0031252 "cell
leading edge" evidence=IEA] [GO:0007399 "nervous system
development" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000922 "spindle pole" evidence=IDA] [GO:0000776
"kinetochore" evidence=IDA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005874 "microtubule" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=TAS] [GO:0007067 "mitosis" evidence=NAS] [GO:0000086 "G2/M
transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006987 "activation of signaling protein activity
involved in unfolded protein response" evidence=TAS] [GO:0019886
"antigen processing and presentation of exogenous peptide antigen
via MHC class II" evidence=TAS] [GO:0030968 "endoplasmic reticulum
unfolded protein response" evidence=TAS] InterPro:IPR000938
Pfam:PF01302 GO:GO:0005829 GO:GO:0005813 Reactome:REACT_116125
Reactome:REACT_6900 Reactome:REACT_115566 GO:GO:0000086
GO:GO:0007399 GO:GO:0031252 GO:GO:0006987 GO:GO:0000776
GO:GO:0007067 GO:GO:0019886 GO:GO:0008219 GO:GO:0006810
GO:GO:0000922 eggNOG:COG5244 GO:GO:0005874 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
Orphanet:803 GO:GO:0003774 PDB:2HQH PDB:3E2U PDBsum:2HQH
PDBsum:3E2U GO:GO:0005868 CTD:1639 HOVERGEN:HBG004956 KO:K04648
OrthoDB:EOG43TZTR InterPro:IPR022157 Pfam:PF12455 OMA:HVYSRTP
EMBL:AF064205 EMBL:AF064203 EMBL:AF064204 EMBL:AK297286
EMBL:AC005041 EMBL:X98801 EMBL:AF086947 EMBL:AF086927 EMBL:AF086928
EMBL:AF086929 EMBL:AF086930 EMBL:AF086931 EMBL:AF086932
EMBL:AF086933 EMBL:AF086934 EMBL:AF086935 EMBL:AF086936
EMBL:AF086937 EMBL:AF086938 EMBL:AF086939 EMBL:AF086940
EMBL:AF086941 EMBL:AF086942 EMBL:AF086943 EMBL:AF086944
EMBL:AF086945 EMBL:AF086946 EMBL:BT006758 IPI:IPI00219114
IPI:IPI00872359 IPI:IPI00916757 RefSeq:NP_001177766.1
RefSeq:NP_004073.2 RefSeq:NP_075408.1 UniGene:Hs.516111 PDB:1TXQ
PDB:2COY PDB:2HKN PDB:2HKQ PDB:2HL3 PDB:2HL5 PDB:3TQ7 PDBsum:1TXQ
PDBsum:2COY PDBsum:2HKN PDBsum:2HKQ PDBsum:2HL3 PDBsum:2HL5
PDBsum:3TQ7 ProteinModelPortal:Q14203 SMR:Q14203 DIP:DIP-31365N
IntAct:Q14203 MINT:MINT-5004548 STRING:Q14203 PhosphoSite:Q14203
DMDM:17375490 OGP:Q14203 PaxDb:Q14203 PRIDE:Q14203 DNASU:1639
Ensembl:ENST00000361874 Ensembl:ENST00000407639
Ensembl:ENST00000409240 GeneID:1639 KEGG:hsa:1639 UCSC:uc002skv.3
UCSC:uc002skx.3 GeneCards:GC02M074588 H-InvDB:HIX0204314
HGNC:HGNC:2711 HPA:CAB009108 MIM:105400 MIM:168605 MIM:601143
MIM:607641 neXtProt:NX_Q14203 Orphanet:139589 Orphanet:178509
PharmGKB:PA27180 HOGENOM:HOG000015352 PhylomeDB:Q14203
ChiTaRS:DCTN1 EvolutionaryTrace:Q14203 GenomeRNAi:1639 NextBio:6734
PMAP-CutDB:Q14203 ArrayExpress:Q14203 Bgee:Q14203 CleanEx:HS_DCTN1
Genevestigator:Q14203 GermOnline:ENSG00000204843 Uniprot:Q14203
Length = 1278
Score = 106 (42.4 bits), Expect = 0.00015, P = 0.00015
Identities = 26/68 (38%), Positives = 42/68 (61%)
Query: 4 KLEERERDIKDLKILLRSKQEEIGEISVRKDLAESKLANAIRDKDYQEQKLKCVTNRINQ 63
KLE+RE IK+LK L+ K EE+ E +VR L E KL +A +D D ++++ V R+ +
Sbjct: 944 KLEDRETVIKELKKSLKIKGEELSEANVRLSLLEKKLDSAAKDAD---ERIEKVQTRLEE 1000
Query: 64 LEEVVDLK 71
+ ++ K
Sbjct: 1001 TQALLRKK 1008
>RGD|62038 [details] [associations]
symbol:Dctn1 "dynactin 1" species:10116 "Rattus norvegicus"
[GO:0000776 "kinetochore" evidence=IEA;ISO] [GO:0000922 "spindle
pole" evidence=IEA;ISO] [GO:0003777 "microtubule motor activity"
evidence=TAS] [GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005868
"cytoplasmic dynein complex" evidence=IDA] [GO:0005874 "microtubule"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=TAS] [GO:0031252 "cell leading
edge" evidence=IEA;ISO] InterPro:IPR000938 Pfam:PF01302 RGD:62038
GO:GO:0005813 GO:GO:0031252 GO:GO:0000776 GO:GO:0006810
GO:GO:0008017 GO:GO:0000922 eggNOG:COG5244 GO:GO:0005874
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 GO:GO:0007017 GO:GO:0003777 GO:GO:0005868 CTD:1639
HOVERGEN:HBG004956 KO:K04648 OrthoDB:EOG43TZTR InterPro:IPR022157
Pfam:PF12455 HOGENOM:HOG000015352 EMBL:X62160 IPI:IPI00196703
PIR:S16129 RefSeq:NP_077044.1 UniGene:Rn.11284
ProteinModelPortal:P28023 SMR:P28023 STRING:P28023
PhosphoSite:P28023 PRIDE:P28023 GeneID:29167 KEGG:rno:29167
UCSC:RGD:62038 InParanoid:P28023 NextBio:608216 PMAP-CutDB:P28023
ArrayExpress:P28023 Genevestigator:P28023
GermOnline:ENSRNOG00000010048 Uniprot:P28023
Length = 1280
Score = 106 (42.4 bits), Expect = 0.00015, P = 0.00015
Identities = 26/68 (38%), Positives = 42/68 (61%)
Query: 4 KLEERERDIKDLKILLRSKQEEIGEISVRKDLAESKLANAIRDKDYQEQKLKCVTNRINQ 63
KLE+RE IK+LK L+ K EE+ E +VR L E KL +A +D D ++++ V R+ +
Sbjct: 943 KLEDRETVIKELKKSLKIKGEELSEANVRLSLLEKKLDSAAKDAD---ERIEKVQTRLEE 999
Query: 64 LEEVVDLK 71
+ ++ K
Sbjct: 1000 TQTLLRKK 1007
>UNIPROTKB|F1SNT8 [details] [associations]
symbol:DCTN1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031252 "cell leading edge" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] InterPro:IPR000938 Pfam:PF01302 GO:GO:0005813
GO:GO:0031252 GO:GO:0000776 GO:GO:0000922 GO:GO:0005874
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 GeneTree:ENSGT00700000104055 InterPro:IPR022157
Pfam:PF12455 OMA:HVYSRTP EMBL:CU468647 Ensembl:ENSSSCT00000009061
Uniprot:F1SNT8
Length = 1286
Score = 106 (42.4 bits), Expect = 0.00015, P = 0.00015
Identities = 26/68 (38%), Positives = 42/68 (61%)
Query: 4 KLEERERDIKDLKILLRSKQEEIGEISVRKDLAESKLANAIRDKDYQEQKLKCVTNRINQ 63
KLE+RE IK+LK L+ K EE+ E +VR L E KL +A +D D ++++ V R+ +
Sbjct: 949 KLEDRETVIKELKKSLKIKGEELSEANVRLSLLEKKLDSAAKDAD---ERIEKVQTRLEE 1005
Query: 64 LEEVVDLK 71
+ ++ K
Sbjct: 1006 TQALLRKK 1013
>UNIPROTKB|P35458 [details] [associations]
symbol:DCTN1 "Dynactin subunit 1" species:9031 "Gallus
gallus" [GO:0003774 "motor activity" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0030286 "dynein complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000938 Pfam:PF01302 GO:GO:0005737 GO:GO:0005874
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 GO:GO:0030286 GO:GO:0003774 EMBL:X62773
IPI:IPI00600697 PIR:A41642 RefSeq:NP_001026538.1 UniGene:Gga.48036
ProteinModelPortal:P35458 STRING:P35458 PRIDE:P35458 GeneID:426238
KEGG:gga:426238 CTD:1639 eggNOG:KOG0971 HOVERGEN:HBG004956
KO:K04648 OrthoDB:EOG43TZTR NextBio:20827907 InterPro:IPR022157
Pfam:PF12455 Uniprot:P35458
Length = 1224
Score = 105 (42.0 bits), Expect = 0.00018, P = 0.00018
Identities = 24/52 (46%), Positives = 35/52 (67%)
Query: 4 KLEERERDIKDLKILLRSKQEEIGEISVRKDLAESKLANAIRDKDYQEQKLK 55
KLE+RE IK+LK L+ K EE+ E +VR L E KL +A +D D + +K++
Sbjct: 937 KLEDRETVIKELKKSLKIKGEELSEANVRLSLLEKKLDSASKDADDRVEKIQ 988
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.310 0.129 0.322 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 72 72 0.00091 102 3 10 23 0.39 29
29 0.43 29
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 10
No. of states in DFA: 435 (46 KB)
Total size of DFA: 90 KB (2070 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 16.08u 0.08s 16.16t Elapsed: 00:00:03
Total cpu time: 16.09u 0.08s 16.17t Elapsed: 00:00:03
Start: Thu Aug 15 11:00:24 2013 End: Thu Aug 15 11:00:27 2013