RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy4580
         (72 letters)



>d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH
          {Rat (Rattus norvegicus) [TaxId: 10116]}
          Length = 446

 Score = 28.4 bits (62), Expect = 0.064
 Identities = 6/43 (13%), Positives = 15/43 (34%), Gaps = 3/43 (6%)

Query: 2  KSKLEERERDIKDLKILLRSKQEEIGEISVR---KDLAESKLA 41
             L+ R + ++ L+ ++    + I         K+   S   
Sbjct: 18 TRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYYE 60


>d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase
          {Thermotoga maritima [TaxId: 2336]}
          Length = 414

 Score = 24.2 bits (51), Expect = 1.9
 Identities = 9/38 (23%), Positives = 20/38 (52%), Gaps = 1/38 (2%)

Query: 2  KSKLEERERDIKDLKILLRSKQEEIGEISVRKDLAESK 39
           +   E+ + IK +   L  +++EI E   R D+ +++
Sbjct: 19 NATTREKNKAIKKIAEKLDERRKEILEA-NRIDVEKAR 55


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.310    0.129    0.322 

Gapped
Lambda     K      H
   0.267   0.0679    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 243,220
Number of extensions: 9250
Number of successful extensions: 23
Number of sequences better than 10.0: 1
Number of HSP's gapped: 23
Number of HSP's successfully gapped: 7
Length of query: 72
Length of database: 2,407,596
Length adjustment: 40
Effective length of query: 32
Effective length of database: 1,858,396
Effective search space: 59468672
Effective search space used: 59468672
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 47 (22.0 bits)