Your job contains 1 sequence.
>psy4582
VQLLLTRWTLDQEVGGSSPSQGGTITDEHIKMSLKSAVEDKIRRKMNEQKVQAQEEIEIL
KQTENELNQGKFKLARMFERIDKEKAELERSISFLKEKETELDEILAVLTEKTEVDVDEA
VTTTAPIYKQIVN
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy4582
(133 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0036666 - symbol:TSG101 "tumor suppressor protein ... 242 4.0e-20 1
ZFIN|ZDB-GENE-030217-1 - symbol:tsg101 "tumor susceptibil... 217 2.1e-17 1
UNIPROTKB|F5H442 - symbol:TSG101 "Tumor susceptibility ge... 209 1.3e-16 1
UNIPROTKB|E1BWW2 - symbol:UEVLD "Uncharacterized protein"... 210 1.3e-16 1
UNIPROTKB|Q99816 - symbol:TSG101 "Tumor susceptibility ge... 209 1.7e-16 1
UNIPROTKB|A3KN51 - symbol:TSG101 "TSG101 protein" species... 207 2.8e-16 1
RGD|3909 - symbol:Tsg101 "tumor susceptibility gene 101" ... 207 2.8e-16 1
UNIPROTKB|E2RGP6 - symbol:TSG101 "Uncharacterized protein... 206 3.6e-16 1
MGI|MGI:106581 - symbol:Tsg101 "tumor susceptibility gene... 206 3.6e-16 1
WB|WBGene00015658 - symbol:tsg-101 species:6239 "Caenorha... 158 8.4e-11 1
UNIPROTKB|O76258 - symbol:tsg-101 "Protein TSG-101" speci... 158 8.4e-11 1
TAIR|locus:2012423 - symbol:LINC3 "LITTLE NUCLEI3" specie... 101 0.00042 1
WB|WBGene00021048 - symbol:W05H9.1 species:6239 "Caenorha... 95 0.00054 1
>FB|FBgn0036666 [details] [associations]
symbol:TSG101 "tumor suppressor protein 101" species:7227
"Drosophila melanogaster" [GO:0006464 "cellular protein
modification process" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0046425 "regulation of JAK-STAT cascade"
evidence=IMP] [GO:0045926 "negative regulation of growth"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0045571 "negative regulation of imaginal disc growth"
evidence=IMP] [GO:0035090 "maintenance of apical/basal cell
polarity" evidence=IMP] [GO:0044130 "negative regulation of growth
of symbiont in host" evidence=IMP] [GO:0060439 "trachea
morphogenesis" evidence=IMP] [GO:0007430 "terminal branching, open
tracheal system" evidence=IMP] InterPro:IPR008883 Pfam:PF05743
PROSITE:PS51322 EMBL:AE014296 GO:GO:0015031 GO:GO:0060439
GO:GO:0006464 GO:GO:0044130 Gene3D:3.10.110.10 InterPro:IPR016135
SUPFAM:SSF54495 GO:GO:0007430 GO:GO:0035090 HSSP:Q99816 KO:K12183
OMA:GSWIREN InterPro:IPR017916 Pfam:PF09454 PROSITE:PS51312
GO:GO:0045571 GeneTree:ENSGT00530000064004 CTD:7251
FlyBase:FBgn0036666 EMBL:AF315343 RefSeq:NP_524120.1
UniGene:Dm.2651 SMR:Q9VVA7 IntAct:Q9VVA7 MINT:MINT-971298
STRING:Q9VVA7 EnsemblMetazoa:FBtr0075329 GeneID:39881
KEGG:dme:Dmel_CG9712 UCSC:CG9712-RA InParanoid:Q9VVA7
GenomeRNAi:39881 NextBio:815872 Uniprot:Q9VVA7
Length = 408
Score = 242 (90.2 bits), Expect = 4.0e-20, P = 4.0e-20
Identities = 47/117 (40%), Positives = 76/117 (64%)
Query: 17 SSPSQGGTITDEHIKMSLKSAVEDKIRRKMNEQKVQAQEEIEILKQTENELNQGKFKLAR 76
S+PS GTIT+EHIK S+ SA++DK+RR++ E+ Q Q EIE L +T+ EL +G K+
Sbjct: 234 SNPSSTGTITEEHIKASIISAIDDKLRRRVQEKVNQYQAEIETLNRTKQELLEGSAKIDA 293
Query: 77 MFERIDKEKAELERSISFLKEKETELDEILAVLXXXXXXXXXXXXXXXXPIYKQIVN 133
+ ER+++E +++++IS LK+KE EL++ L L P+Y+Q++N
Sbjct: 294 IIERLEREHIDMQKNISILKDKEQELEKALEDLESAEAINPDEAVTTTAPLYRQLLN 350
>ZFIN|ZDB-GENE-030217-1 [details] [associations]
symbol:tsg101 "tumor susceptibility gene 101"
species:7955 "Danio rerio" [GO:0006464 "cellular protein
modification process" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR008883 Pfam:PF05743 PROSITE:PS51322
ZFIN:ZDB-GENE-030217-1 GO:GO:0015031 GO:GO:0006464
Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
eggNOG:NOG317261 KO:K12183 InterPro:IPR017916 Pfam:PF09454
PROSITE:PS51312 CTD:7251 HOGENOM:HOG000247008 HOVERGEN:HBG057450
OrthoDB:EOG476K0B EMBL:BC071540 IPI:IPI00511433
RefSeq:NP_001002089.1 UniGene:Dr.31085 ProteinModelPortal:Q6IQ70
SMR:Q6IQ70 STRING:Q6IQ70 PRIDE:Q6IQ70 GeneID:415179 KEGG:dre:415179
InParanoid:Q6IQ70 NextBio:20818849 Bgee:Q6IQ70 Uniprot:Q6IQ70
Length = 390
Score = 217 (81.4 bits), Expect = 2.1e-17, P = 2.1e-17
Identities = 50/129 (38%), Positives = 75/129 (58%)
Query: 6 TRWTLDQEVGGSSPSQGGTITDEHIKMSLKSAVEDKIRRKMNEQKVQAQEEIEILKQTEN 65
+ +T V PS+ GTI ++ I+ SL SAV DK+R +M E+ +AQ E++ LK+TE
Sbjct: 202 SHYTSQTPVTTVGPSRDGTIGEDTIRASLISAVSDKLRWRMKEEMDRAQAELDALKRTEE 261
Query: 66 ELNQGKFKLARMFERIDKEKAELERSISFLKEKETELDEILAVLXXXXXXXXXXXXXX-X 124
+L +G KL M R+D+E AE++R+I LK+K+ EL E L +
Sbjct: 262 DLKKGHQKLEDMVSRLDQEVAEVDRNIELLKKKDEELSEALEKMENQSENNDIDDVIIPT 321
Query: 125 XPIYKQIVN 133
P+YKQI+N
Sbjct: 322 APLYKQILN 330
>UNIPROTKB|F5H442 [details] [associations]
symbol:TSG101 "Tumor susceptibility gene 101 protein"
species:9606 "Homo sapiens" [GO:0006464 "cellular protein
modification process" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR008883 Pfam:PF05743 PROSITE:PS51322
GO:GO:0005886 GO:GO:0005737 GO:GO:0005730 GO:GO:0015031
GO:GO:0006464 Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
InterPro:IPR017916 Pfam:PF09454 PROSITE:PS51312 HGNC:HGNC:15971
ChiTaRS:TSG101 EMBL:AC027544 IPI:IPI01014105
ProteinModelPortal:F5H442 SMR:F5H442 Ensembl:ENST00000536719
ArrayExpress:F5H442 Bgee:F5H442 Uniprot:F5H442
Length = 365
Score = 209 (78.6 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 46/116 (39%), Positives = 70/116 (60%)
Query: 19 PSQGGTITDEHIKMSLKSAVEDKIRRKMNEQKVQAQEEIEILKQTENELNQGKFKLARMF 78
PS+ GTI+++ I+ SL SAV DK+R +M E+ +AQ E+ LK+TE +L +G KL M
Sbjct: 215 PSRDGTISEDTIRASLISAVSDKLRWRMKEEMDRAQAELNALKRTEEDLKKGHQKLEEMV 274
Query: 79 ERIDKEKAELERSISFLKEKETELDEILAVLXXXXXXXXXXXXXX-XXPIYKQIVN 133
R+D+E AE++++I LK+K+ EL L + P+YKQI+N
Sbjct: 275 TRLDQEVAEVDKNIELLKKKDEELSSALEKMENQSENNDIDEVIIPTAPLYKQILN 330
>UNIPROTKB|E1BWW2 [details] [associations]
symbol:UEVLD "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006464 "cellular protein modification process"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0001558 "regulation of cell growth" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005769 "early endosome"
evidence=IEA] [GO:0005770 "late endosome" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0007050 "cell cycle arrest"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0030216 "keratinocyte
differentiation" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] [GO:0043162 "ubiquitin-dependent
protein catabolic process via the multivesicular body sorting
pathway" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0046755 "non-lytic
virus budding" evidence=IEA] [GO:0048306 "calcium-dependent protein
binding" evidence=IEA] InterPro:IPR008883 Pfam:PF05743
PROSITE:PS51322 GO:GO:0005886 GO:GO:0003714 GO:GO:0045892
GO:GO:0008285 GO:GO:0030154 GO:GO:0005730 GO:GO:0001558
GO:GO:0015031 GO:GO:0007050 GO:GO:0005770 GO:GO:0006464
Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495 GO:GO:0005769
GO:GO:0043162 InterPro:IPR017916 Pfam:PF09454 PROSITE:PS51312
OMA:MPGMPAV GeneTree:ENSGT00530000064004 EMBL:AADN02030413
IPI:IPI00588611 Ensembl:ENSGALT00000010207 Uniprot:E1BWW2
Length = 393
Score = 210 (79.0 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 46/116 (39%), Positives = 70/116 (60%)
Query: 19 PSQGGTITDEHIKMSLKSAVEDKIRRKMNEQKVQAQEEIEILKQTENELNQGKFKLARMF 78
PS+ GTI+++ I+ SL SAV DK+R +M E+ +AQ E+ LK+TE +L +G KL M
Sbjct: 218 PSRDGTISEDTIRASLISAVSDKLRWRMKEEMDRAQAELNALKRTEEDLKKGHQKLEEMV 277
Query: 79 ERIDKEKAELERSISFLKEKETELDEILAVLXXXXXXXXXXXXXX-XXPIYKQIVN 133
R+D+E AE++++I LK+K+ EL L + P+YKQI+N
Sbjct: 278 TRLDQEVAEVDKNIELLKKKDEELSSALEKMESQSENNDIDEVIIPTAPLYKQILN 333
>UNIPROTKB|Q99816 [details] [associations]
symbol:TSG101 "Tumor susceptibility gene 101 protein"
species:9606 "Homo sapiens" [GO:0006464 "cellular protein
modification process" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0001558
"regulation of cell growth" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0007050
"cell cycle arrest" evidence=IEA] [GO:0008285 "negative regulation
of cell proliferation" evidence=IEA] [GO:0030216 "keratinocyte
differentiation" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0031902 "late
endosome membrane" evidence=IEA] [GO:0048306 "calcium-dependent
protein binding" evidence=IPI] [GO:0005769 "early endosome"
evidence=IDA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IPI] [GO:0046755 "non-lytic virus budding"
evidence=ISS;IMP] [GO:0005737 "cytoplasm" evidence=ISS;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0003677 "DNA
binding" evidence=TAS] [GO:0005771 "multivesicular body"
evidence=TAS] [GO:0043130 "ubiquitin binding" evidence=TAS]
[GO:0043162 "ubiquitin-dependent protein catabolic process via the
multivesicular body sorting pathway" evidence=IDA] [GO:0010008
"endosome membrane" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016044 "cellular membrane organization"
evidence=TAS] [GO:0016197 "endosomal transport" evidence=TAS]
[GO:0046788 "egress of virus within host cell" evidence=TAS]
[GO:0005770 "late endosome" evidence=IMP] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
Reactome:REACT_11123 InterPro:IPR008883 Pfam:PF05743
PROSITE:PS50127 PROSITE:PS51322 GO:GO:0005886 Reactome:REACT_116125
GO:GO:0003714 GO:GO:0045892 GO:GO:0030216 GO:GO:0008285
GO:GO:0005730 GO:GO:0051301 GO:GO:0031902 GO:GO:0001558
GO:GO:0003677 GO:GO:0015031 GO:GO:0007050 GO:GO:0016197
GO:GO:0010008 GO:GO:0008333 Gene3D:3.10.110.10 InterPro:IPR016135
SUPFAM:SSF54495 GO:GO:0005769 GO:GO:0005771 GO:GO:0016044
GO:GO:0043130 GO:GO:0030374 PROSITE:PS00183 GO:GO:0006513
GO:GO:0043162 eggNOG:NOG317261 KO:K12183 InterPro:IPR017916
Pfam:PF09454 PROSITE:PS51312 OMA:MPGMPAV GO:GO:0046788 PDB:3OBQ
PDBsum:3OBQ GO:GO:0046755 EMBL:U82130 EMBL:BC002487 IPI:IPI00018434
IPI:IPI00219826 RefSeq:NP_006283.1 UniGene:Hs.523512 PDB:1KPP
PDB:1KPQ PDB:1M4P PDB:1M4Q PDB:1S1Q PDB:2F0R PDB:3IV1 PDB:3OBS
PDB:3OBU PDB:3OBX PDB:3P9G PDB:3P9H PDBsum:1KPP PDBsum:1KPQ
PDBsum:1M4P PDBsum:1M4Q PDBsum:1S1Q PDBsum:2F0R PDBsum:3IV1
PDBsum:3OBS PDBsum:3OBU PDBsum:3OBX PDBsum:3P9G PDBsum:3P9H
ProteinModelPortal:Q99816 SMR:Q99816 DIP:DIP-31809N IntAct:Q99816
MINT:MINT-234338 STRING:Q99816 PhosphoSite:Q99816 DMDM:9789790
PaxDb:Q99816 PeptideAtlas:Q99816 PRIDE:Q99816 DNASU:7251
Ensembl:ENST00000251968 Ensembl:ENST00000357193 GeneID:7251
KEGG:hsa:7251 UCSC:uc001mor.3 CTD:7251 GeneCards:GC11M018501
HGNC:HGNC:15971 HPA:CAB004283 HPA:HPA006161 MIM:601387
neXtProt:NX_Q99816 PharmGKB:PA38068 HOGENOM:HOG000247008
HOVERGEN:HBG057450 InParanoid:Q99816 OrthoDB:EOG476K0B
PhylomeDB:Q99816 BindingDB:Q99816 ChEMBL:CHEMBL6157 ChiTaRS:TSG101
EvolutionaryTrace:Q99816 GenomeRNAi:7251 NextBio:28353
ArrayExpress:Q99816 Bgee:Q99816 CleanEx:HS_TSG101
Genevestigator:Q99816 GermOnline:ENSG00000074319 Uniprot:Q99816
Length = 390
Score = 209 (78.6 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 46/116 (39%), Positives = 70/116 (60%)
Query: 19 PSQGGTITDEHIKMSLKSAVEDKIRRKMNEQKVQAQEEIEILKQTENELNQGKFKLARMF 78
PS+ GTI+++ I+ SL SAV DK+R +M E+ +AQ E+ LK+TE +L +G KL M
Sbjct: 215 PSRDGTISEDTIRASLISAVSDKLRWRMKEEMDRAQAELNALKRTEEDLKKGHQKLEEMV 274
Query: 79 ERIDKEKAELERSISFLKEKETELDEILAVLXXXXXXXXXXXXXX-XXPIYKQIVN 133
R+D+E AE++++I LK+K+ EL L + P+YKQI+N
Sbjct: 275 TRLDQEVAEVDKNIELLKKKDEELSSALEKMENQSENNDIDEVIIPTAPLYKQILN 330
>UNIPROTKB|A3KN51 [details] [associations]
symbol:TSG101 "TSG101 protein" species:9913 "Bos taurus"
[GO:0048306 "calcium-dependent protein binding" evidence=IEA]
[GO:0046755 "non-lytic virus budding" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043162 "ubiquitin-dependent protein catabolic process via the
multivesicular body sorting pathway" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0030216
"keratinocyte differentiation" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0007050 "cell
cycle arrest" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005770 "late endosome" evidence=IEA] [GO:0005769
"early endosome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0001558 "regulation of cell growth" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0006464 "cellular
protein modification process" evidence=IEA] InterPro:IPR008883
Pfam:PF05743 PROSITE:PS51322 GO:GO:0005886 GO:GO:0003714
GO:GO:0045892 GO:GO:0030216 GO:GO:0008285 GO:GO:0005730
GO:GO:0001558 GO:GO:0015031 GO:GO:0007050 GO:GO:0005770
GO:GO:0006464 Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
GO:GO:0005769 GO:GO:0043162 eggNOG:NOG317261 KO:K12183
InterPro:IPR017916 Pfam:PF09454 PROSITE:PS51312 OMA:MPGMPAV
GeneTree:ENSGT00530000064004 CTD:7251 HOGENOM:HOG000247008
HOVERGEN:HBG057450 OrthoDB:EOG476K0B EMBL:DAAA02062983
EMBL:BC133615 IPI:IPI00689058 RefSeq:NP_001091464.1
UniGene:Bt.62898 SMR:A3KN51 STRING:A3KN51
Ensembl:ENSBTAT00000018032 GeneID:507659 KEGG:bta:507659
InParanoid:A3KN51 NextBio:20868160 Uniprot:A3KN51
Length = 391
Score = 207 (77.9 bits), Expect = 2.8e-16, P = 2.8e-16
Identities = 45/116 (38%), Positives = 70/116 (60%)
Query: 19 PSQGGTITDEHIKMSLKSAVEDKIRRKMNEQKVQAQEEIEILKQTENELNQGKFKLARMF 78
PS+ GTI+++ I+ SL SAV DK+R +M E+ +AQ E+ LK+TE +L +G KL M
Sbjct: 216 PSRDGTISEDTIRASLISAVSDKLRWRMKEEMDRAQAELNALKRTEEDLKKGHQKLEEMV 275
Query: 79 ERIDKEKAELERSISFLKEKETELDEILAVLXXXXXXXXXXXXXX-XXPIYKQIVN 133
R+D+E AE++++I L++K+ EL L + P+YKQI+N
Sbjct: 276 NRLDQEVAEVDKNIELLRKKDEELSSALEKMENQSENNDIDEVIIPTAPLYKQILN 331
>RGD|3909 [details] [associations]
symbol:Tsg101 "tumor susceptibility gene 101" species:10116 "Rattus
norvegicus" [GO:0001558 "regulation of cell growth" evidence=ISO]
[GO:0003714 "transcription corepressor activity" evidence=ISO]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO;ISS] [GO:0005769
"early endosome" evidence=ISO] [GO:0005770 "late endosome"
evidence=ISO] [GO:0005886 "plasma membrane" evidence=ISO] [GO:0006464
"cellular protein modification process" evidence=IEA] [GO:0006513
"protein monoubiquitination" evidence=IDA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007050 "cell cycle arrest" evidence=ISO]
[GO:0008285 "negative regulation of cell proliferation" evidence=ISO]
[GO:0008333 "endosome to lysosome transport" evidence=IMP]
[GO:0015031 "protein transport" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=ISO] [GO:0030216 "keratinocyte
differentiation" evidence=ISO] [GO:0030374 "ligand-dependent nuclear
receptor transcription coactivator activity" evidence=IDA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=ISO]
[GO:0031902 "late endosome membrane" evidence=IEA] [GO:0040008
"regulation of growth" evidence=IEA] [GO:0043162 "ubiquitin-dependent
protein catabolic process via the multivesicular body sorting
pathway" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0046755 "non-lytic
virus budding" evidence=ISO;ISS] [GO:0048306 "calcium-dependent
protein binding" evidence=ISO] [GO:0051301 "cell division"
evidence=IEA] InterPro:IPR008883 Pfam:PF05743 PROSITE:PS51322
RGD:3909 GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 GO:GO:0003714
GO:GO:0045892 GO:GO:0030216 GO:GO:0008285 GO:GO:0005730 GO:GO:0051301
GO:GO:0031902 GO:GO:0001558 GO:GO:0015031 GO:GO:0007050 GO:GO:0008333
Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495 GO:GO:0005769
GO:GO:0030374 GO:GO:0006513 GO:GO:0043162 eggNOG:NOG317261 KO:K12183
InterPro:IPR017916 Pfam:PF09454 PROSITE:PS51312 GO:GO:0046755
CTD:7251 HOGENOM:HOG000247008 HOVERGEN:HBG057450 OrthoDB:EOG476K0B
EMBL:AY293306 EMBL:BC070951 IPI:IPI00421916 RefSeq:NP_853659.2
UniGene:Rn.7410 ProteinModelPortal:Q6IRE4 SMR:Q6IRE4 IntAct:Q6IRE4
STRING:Q6IRE4 PRIDE:Q6IRE4 GeneID:292925 KEGG:rno:292925
UCSC:RGD:3909 NextBio:635072 ArrayExpress:Q6IRE4
Genevestigator:Q6IRE4 Uniprot:Q6IRE4
Length = 391
Score = 207 (77.9 bits), Expect = 2.8e-16, P = 2.8e-16
Identities = 46/118 (38%), Positives = 70/118 (59%)
Query: 17 SSPSQGGTITDEHIKMSLKSAVEDKIRRKMNEQKVQAQEEIEILKQTENELNQGKFKLAR 76
+ PS+ GTI+++ I+ SL SAV DK+R +M E+ AQ E+ LK+TE +L +G KL
Sbjct: 214 AGPSRDGTISEDTIRASLISAVSDKLRWRMKEEMDGAQAELNALKRTEEDLKKGHQKLEE 273
Query: 77 MFERIDKEKAELERSISFLKEKETELDEILAVLXXXXXXXXXXXXXX-XXPIYKQIVN 133
M R+D+E AE++++I LK+K+ EL L + P+YKQI+N
Sbjct: 274 MVTRLDQEVAEVDKNIELLKKKDEELSSALEKMENQSENNDIDEVIIPTAPLYKQILN 331
>UNIPROTKB|E2RGP6 [details] [associations]
symbol:TSG101 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0015031 "protein transport" evidence=IEA]
[GO:0006464 "cellular protein modification process" evidence=IEA]
InterPro:IPR008883 Pfam:PF05743 PROSITE:PS51322 GO:GO:0015031
GO:GO:0006464 Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
KO:K12183 InterPro:IPR017916 Pfam:PF09454 PROSITE:PS51312
GeneTree:ENSGT00530000064004 CTD:7251 EMBL:AAEX03012968
RefSeq:XP_542525.1 ProteinModelPortal:E2RGP6
Ensembl:ENSCAFT00000014807 GeneID:485406 KEGG:cfa:485406
OMA:ISEDHIR Uniprot:E2RGP6
Length = 391
Score = 206 (77.6 bits), Expect = 3.6e-16, P = 3.6e-16
Identities = 45/116 (38%), Positives = 70/116 (60%)
Query: 19 PSQGGTITDEHIKMSLKSAVEDKIRRKMNEQKVQAQEEIEILKQTENELNQGKFKLARMF 78
PS+ GTI+++ I+ SL SAV DK+R +M E+ +AQ E+ LK+TE +L +G KL M
Sbjct: 216 PSRDGTISEDTIRASLISAVSDKLRWRMKEEMDRAQAELNALKRTEEDLKKGHQKLEEMV 275
Query: 79 ERIDKEKAELERSISFLKEKETELDEILAVLXXXXXXXXXXXXXX-XXPIYKQIVN 133
R+D+E AE++++I L++K+ EL L + P+YKQI+N
Sbjct: 276 TRLDQEVAEVDKNIELLRKKDEELSSALEKMENQSENNDIDEVIIPTAPLYKQILN 331
>MGI|MGI:106581 [details] [associations]
symbol:Tsg101 "tumor susceptibility gene 101" species:10090
"Mus musculus" [GO:0001558 "regulation of cell growth"
evidence=IDA] [GO:0003714 "transcription corepressor activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO;IC] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0005768 "endosome" evidence=IEA] [GO:0005769
"early endosome" evidence=ISO] [GO:0005770 "late endosome"
evidence=ISO] [GO:0006464 "cellular protein modification process"
evidence=IEA] [GO:0006513 "protein monoubiquitination"
evidence=ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007050 "cell cycle arrest"
evidence=IDA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IDA] [GO:0008333 "endosome to lysosome
transport" evidence=ISO] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0019048
"virus-host interaction" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IDA] [GO:0030216 "keratinocyte
differentiation" evidence=IDA] [GO:0030374 "ligand-dependent
nuclear receptor transcription coactivator activity" evidence=ISO]
[GO:0031625 "ubiquitin protein ligase binding" evidence=ISO]
[GO:0040008 "regulation of growth" evidence=IEA] [GO:0043162
"ubiquitin-dependent protein catabolic process via the
multivesicular body sorting pathway" evidence=ISO] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0046755 "non-lytic virus budding" evidence=ISO;IMP] [GO:0048306
"calcium-dependent protein binding" evidence=ISO] [GO:0051301 "cell
division" evidence=IEA] InterPro:IPR008883 Pfam:PF05743
PROSITE:PS50127 PROSITE:PS51322 MGI:MGI:106581 GO:GO:0005886
GO:GO:0005634 GO:GO:0005737 GO:GO:0003714 GO:GO:0045892
GO:GO:0019048 GO:GO:0030216 GO:GO:0008285 GO:GO:0005730
GO:GO:0051301 GO:GO:0031902 GO:GO:0001558 GO:GO:0015031
GO:GO:0007050 GO:GO:0008333 Gene3D:3.10.110.10 InterPro:IPR016135
SUPFAM:SSF54495 GO:GO:0005769 GO:GO:0030374 PROSITE:PS00183
GO:GO:0006513 GO:GO:0043162 eggNOG:NOG317261 KO:K12183
InterPro:IPR017916 Pfam:PF09454 PROSITE:PS51312 OMA:MPGMPAV
GO:GO:0046755 GeneTree:ENSGT00530000064004 CTD:7251
HOGENOM:HOG000247008 HOVERGEN:HBG057450 OrthoDB:EOG476K0B
ChiTaRS:TSG101 EMBL:U52945 EMBL:AF060868 EMBL:BC005424
EMBL:BC085308 IPI:IPI00117944 RefSeq:NP_068684.1 UniGene:Mm.241334
ProteinModelPortal:Q61187 SMR:Q61187 IntAct:Q61187 MINT:MINT-235334
STRING:Q61187 PhosphoSite:Q61187 PaxDb:Q61187 PRIDE:Q61187
Ensembl:ENSMUST00000014546 GeneID:22088 KEGG:mmu:22088
InParanoid:Q61187 NextBio:301926 Bgee:Q61187 CleanEx:MM_TSG101
Genevestigator:Q61187 GermOnline:ENSMUSG00000014402 Uniprot:Q61187
Length = 391
Score = 206 (77.6 bits), Expect = 3.6e-16, P = 3.6e-16
Identities = 46/116 (39%), Positives = 69/116 (59%)
Query: 19 PSQGGTITDEHIKMSLKSAVEDKIRRKMNEQKVQAQEEIEILKQTENELNQGKFKLARMF 78
PS+ GTI+++ I+ SL SAV DK+R +M E+ AQ E+ LK+TE +L +G KL M
Sbjct: 216 PSRDGTISEDTIRASLISAVSDKLRWRMKEEMDGAQAELNALKRTEEDLKKGHQKLEEMV 275
Query: 79 ERIDKEKAELERSISFLKEKETELDEILAVLXXXXXXXXXXXXXX-XXPIYKQIVN 133
R+D+E AE++++I LK+K+ EL L + P+YKQI+N
Sbjct: 276 TRLDQEVAEVDKNIELLKKKDEELSSALEKMENQSENNDIDEVIIPTAPLYKQILN 331
>WB|WBGene00015658 [details] [associations]
symbol:tsg-101 species:6239 "Caenorhabditis elegans"
[GO:0006464 "cellular protein modification process" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0000813 "ESCRT I complex"
evidence=IPI] [GO:0032510 "endosome to lysosome transport via
multivesicular body sorting pathway" evidence=IMP] [GO:0032801
"receptor catabolic process" evidence=IMP] [GO:0010008 "endosome
membrane" evidence=IDA] InterPro:IPR008883 Pfam:PF05743
PROSITE:PS51322 GO:GO:0009792 GO:GO:0006898 GO:GO:0002119
GO:GO:0015031 GO:GO:0006464 GO:GO:0030163 Gene3D:3.10.110.10
InterPro:IPR016135 SUPFAM:SSF54495 GO:GO:0032801 HSSP:Q99816
eggNOG:NOG317261 KO:K12183 GO:GO:0000813 InterPro:IPR017916
Pfam:PF09454 PROSITE:PS51312 OMA:MPGMPAV GO:GO:0032510
EMBL:FO080481 GeneTree:ENSGT00530000064004 HOGENOM:HOG000247008
PIR:H88650 RefSeq:NP_500364.2 UniGene:Cel.13532
ProteinModelPortal:O76258 SMR:O76258 IntAct:O76258 STRING:O76258
PaxDb:O76258 EnsemblMetazoa:C09G12.9 GeneID:182474
KEGG:cel:CELE_C09G12.9 UCSC:C09G12.9 CTD:182474 WormBase:C09G12.9
InParanoid:O76258 NextBio:917706 Uniprot:O76258
Length = 425
Score = 158 (60.7 bits), Expect = 8.4e-11, P = 8.4e-11
Identities = 36/115 (31%), Positives = 61/115 (53%)
Query: 18 SPSQGGTITDEHIKMSLKSAVEDKIRRKMNEQKVQAQEEIEILKQTENELNQGKFKLARM 77
S S GGTI + I+ S+ SAVE+KIR K+ E+ E+ ++ T +EL +G+ KL RM
Sbjct: 252 SSSSGGTIQADTIRASVMSAVEEKIRAKLRERMGTNSAEMASIRTTSDELREGQQKLKRM 311
Query: 78 FERIDKEKAELERSISFLKEKETELDEILAVLXXXXXXXXXXXXXXXXPIYKQIV 132
E ++ +++ L+ + K+ EL + L+ P+++QIV
Sbjct: 312 LEELETQRSSLQTACEIYTAKKAELAKALSDAGGTDAPPIDEAIDAAFPLHRQIV 366
>UNIPROTKB|O76258 [details] [associations]
symbol:tsg-101 "Protein TSG-101" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR008883 Pfam:PF05743 PROSITE:PS51322
GO:GO:0009792 GO:GO:0006898 GO:GO:0002119 GO:GO:0015031
GO:GO:0006464 GO:GO:0030163 Gene3D:3.10.110.10 InterPro:IPR016135
SUPFAM:SSF54495 GO:GO:0032801 HSSP:Q99816 eggNOG:NOG317261
KO:K12183 GO:GO:0000813 InterPro:IPR017916 Pfam:PF09454
PROSITE:PS51312 OMA:MPGMPAV GO:GO:0032510 EMBL:FO080481
GeneTree:ENSGT00530000064004 HOGENOM:HOG000247008 PIR:H88650
RefSeq:NP_500364.2 UniGene:Cel.13532 ProteinModelPortal:O76258
SMR:O76258 IntAct:O76258 STRING:O76258 PaxDb:O76258
EnsemblMetazoa:C09G12.9 GeneID:182474 KEGG:cel:CELE_C09G12.9
UCSC:C09G12.9 CTD:182474 WormBase:C09G12.9 InParanoid:O76258
NextBio:917706 Uniprot:O76258
Length = 425
Score = 158 (60.7 bits), Expect = 8.4e-11, P = 8.4e-11
Identities = 36/115 (31%), Positives = 61/115 (53%)
Query: 18 SPSQGGTITDEHIKMSLKSAVEDKIRRKMNEQKVQAQEEIEILKQTENELNQGKFKLARM 77
S S GGTI + I+ S+ SAVE+KIR K+ E+ E+ ++ T +EL +G+ KL RM
Sbjct: 252 SSSSGGTIQADTIRASVMSAVEEKIRAKLRERMGTNSAEMASIRTTSDELREGQQKLKRM 311
Query: 78 FERIDKEKAELERSISFLKEKETELDEILAVLXXXXXXXXXXXXXXXXPIYKQIV 132
E ++ +++ L+ + K+ EL + L+ P+++QIV
Sbjct: 312 LEELETQRSSLQTACEIYTAKKAELAKALSDAGGTDAPPIDEAIDAAFPLHRQIV 366
>TAIR|locus:2012423 [details] [associations]
symbol:LINC3 "LITTLE NUCLEI3" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0000226
"microtubule cytoskeleton organization" evidence=RCA] [GO:0000911
"cytokinesis by cell plate formation" evidence=RCA] [GO:0005654
"nucleoplasm" evidence=IDA] EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0009506 GO:GO:0005730 eggNOG:NOG12793 EMBL:AC011914
HSSP:P01106 IPI:IPI00537484 PIR:F96712 RefSeq:NP_177046.1
UniGene:At.28034 UniGene:At.46730 ProteinModelPortal:Q9CA42
IntAct:Q9CA42 STRING:Q9CA42 PaxDb:Q9CA42 PRIDE:Q9CA42
EnsemblPlants:AT1G68790.1 GeneID:843210 KEGG:ath:AT1G68790
TAIR:At1g68790 HOGENOM:HOG000239398 InParanoid:Q9CA42 OMA:TEREAHE
PhylomeDB:Q9CA42 ProtClustDB:CLSN2681963 Genevestigator:Q9CA42
Uniprot:Q9CA42
Length = 1085
Score = 101 (40.6 bits), Expect = 0.00042, P = 0.00042
Identities = 27/96 (28%), Positives = 58/96 (60%)
Query: 12 QEVGGSSPSQGGTITDEH--IKMSLKSAVED-KIRRKMNEQ--KVQAQEEIEILKQTENE 66
+E+G + Q I +EH ++++ + VE +++ ++ +Q KV+ +EE+ +LK+ E E
Sbjct: 467 EEIGTETTKQESRIREEHESLRITKEERVEFLRLQSELKQQIDKVKQEEEL-LLKERE-E 524
Query: 67 LNQGKFKLARMFERIDKEKAELERSISFLKEKETEL 102
L Q K + + +E +DK++A + R + + E+ +L
Sbjct: 525 LKQDKERFEKEWEALDKKRANITREQNEVAEENEKL 560
>WB|WBGene00021048 [details] [associations]
symbol:W05H9.1 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] EMBL:FO080545
PIR:T26205 RefSeq:NP_509050.1 ProteinModelPortal:Q23179
DIP:DIP-25576N IntAct:Q23179 MINT:MINT-1080262 STRING:Q23179
PaxDb:Q23179 EnsemblMetazoa:W05H9.1.1 EnsemblMetazoa:W05H9.1.2
GeneID:180901 KEGG:cel:CELE_W05H9.1 UCSC:W05H9.1.1 CTD:180901
WormBase:W05H9.1 eggNOG:NOG295659 GeneTree:ENSGT00700000105233
HOGENOM:HOG000017645 InParanoid:Q23179 OMA:PVDIAPK NextBio:911472
Uniprot:Q23179
Length = 414
Score = 95 (38.5 bits), Expect = 0.00054, P = 0.00054
Identities = 25/67 (37%), Positives = 41/67 (61%)
Query: 40 DKIRRKMNEQKVQAQEEIEILKQTENELNQGKFKLARMFERIDKEKAEL-ERSISFLKEK 98
DKI++K E++ Q QE+IE KQ +L Q + +L ++ID K +L ER L+E
Sbjct: 143 DKIKQKQEEKEAQRQEQIEKWKQASEKLQQQREELK---QQIDAAKQKLDERRKQKLEEL 199
Query: 99 ETELDEI 105
+T+L ++
Sbjct: 200 KTDLAQV 206
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.311 0.130 0.336 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 133 117 0.00091 102 3 10 23 0.40 31
29 0.46 32
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 13
No. of states in DFA: 576 (61 KB)
Total size of DFA: 143 KB (2088 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 28.76u 0.12s 28.88t Elapsed: 00:00:01
Total cpu time: 28.77u 0.12s 28.89t Elapsed: 00:00:01
Start: Thu Aug 15 11:01:37 2013 End: Thu Aug 15 11:01:38 2013