Query psy4586
Match_columns 294
No_of_seqs 221 out of 555
Neff 3.8
Searched_HMMs 46136
Date Fri Aug 16 20:43:39 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4586.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/4586hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0010|consensus 100.0 2.6E-46 5.7E-51 367.9 14.9 202 22-267 115-316 (493)
2 smart00727 STI1 Heat shock cha 97.4 0.00018 3.9E-09 48.9 3.5 31 68-98 6-40 (41)
3 KOG0010|consensus 96.9 0.0061 1.3E-07 62.1 10.2 15 241-255 304-318 (493)
4 smart00727 STI1 Heat shock cha 96.6 0.0021 4.7E-08 43.6 3.1 17 111-129 23-39 (41)
5 PF09280 XPC-binding: XPC-bind 96.1 0.0042 9.1E-08 46.7 2.2 43 69-111 4-55 (59)
6 TIGR00601 rad23 UV excision re 94.3 0.057 1.2E-06 53.4 4.6 45 68-112 250-303 (378)
7 PF09280 XPC-binding: XPC-bind 92.3 0.49 1.1E-05 35.6 5.9 45 77-136 3-47 (59)
8 KOG0011|consensus 88.5 0.55 1.2E-05 46.3 4.1 7 80-86 234-240 (340)
9 TIGR00601 rad23 UV excision re 85.9 1.7 3.7E-05 43.2 6.0 18 122-139 280-297 (378)
10 KOG0011|consensus 70.7 12 0.00027 37.1 6.5 37 96-139 229-265 (340)
11 KOG0548|consensus 55.9 23 0.0005 37.3 5.5 49 61-117 477-526 (539)
12 KOG1999|consensus 39.8 70 0.0015 36.1 6.4 73 219-291 848-932 (1024)
13 KOG0033|consensus 31.3 18 0.00038 35.7 0.3 19 9-27 130-148 (355)
14 KOG1308|consensus 30.2 54 0.0012 33.2 3.4 23 66-88 321-343 (377)
15 COG2967 ApaG Uncharacterized p 27.7 33 0.00072 29.8 1.3 12 278-289 47-58 (126)
16 KOG0665|consensus 23.8 30 0.00065 34.8 0.4 20 8-27 137-156 (369)
17 PF14327 CSTF2_hinge: Hinge do 23.4 62 0.0013 25.5 2.0 17 80-96 44-60 (84)
18 COG2810 Predicted type IV rest 23.4 48 0.001 32.2 1.7 15 277-291 104-118 (284)
19 KOG2857|consensus 20.6 3.5E+02 0.0077 24.4 6.3 23 83-106 88-110 (157)
No 1
>KOG0010|consensus
Probab=100.00 E-value=2.6e-46 Score=367.86 Aligned_cols=202 Identities=54% Similarity=0.868 Sum_probs=182.3
Q ss_pred hcccchhhccccCCCCCCCCCCCCCccccHHHHHHHhhcCCHHHHHhhhCCHHHHhhhcChHHHHHHHhhChHHHHHHhh
Q psy4586 22 VFFKSIYLDYVLGLGGLDALGMGSANFMELQQRMQTEMLRNPEMLRTILDNPLVQGMLNDPNSMRNLIMSNPQMQDLIER 101 (294)
Q Consensus 22 ~~~~~~~~g~lggL~GL~~~G~~sg~f~d~~qqM~qQLm~nPe~M~qmMnNP~VQsMLSNP~lmrqMI~sNPqmqqmmeq 101 (294)
+.++||.+..+++++|++..|.....|.+.+.+++++++++||++.+||+||+||+||+||++||++|.+||+|+++|++
T Consensus 115 a~~~p~~l~~~~~~~g~~~~~~~~~~F~~l~~~~q~~~~snpe~~~~~m~nP~vq~ll~Npd~mrq~I~anPqmq~lm~~ 194 (493)
T KOG0010|consen 115 ASSNPFSLLTVGGFAGLSSLGLFAAMFGELQSQMQNQLLSNPEALRQMMENPIVQSLLNNPDLMRQLIMANPQMQDLMQR 194 (493)
T ss_pred ccCCcccccccccccccccCCcchhhcccccccchhccccCHHHHHHhhhChHHHHHhcChHHHHHHHhcCHHHHHHHhh
Confidence 45577776778889999999999999999988999999999999999999999999999999999999999999999999
Q ss_pred ChhhhhccCChHHHHHHHHHhhCHHHHHHHHHHhHHHHHccccCCCCCchhHhHhhhccchhhHhhhccCCCCCcccccC
Q psy4586 102 NPEINHMLNNPELLRQTMEMARNPSMLQELMRTQDRALSNLESIPGGYSALQRMYRDIQEPMLNAATQQFSRNPYESNSS 181 (294)
Q Consensus 102 NPElrqMLnNPE~LRQmmemmrNPa~mQEMMR~QDrALsnLEsiPGG~NaL~rmy~DiqePMlnA~~~~~ggNPFaaL~~ 181 (294)
|||++|+++||+++||++|++|||+++|||||++|++++++|+||||||+|+|||+||||||+||++++||+|||+++.+
T Consensus 195 npei~h~ln~p~i~rQtle~arNP~m~qemmrn~d~a~SnlesiPgG~n~l~~my~diqdPm~Na~~~~~g~Npfasl~~ 274 (493)
T KOG0010|consen 195 NPEIGHLLNNPLILRQTLESARNPEMMQEMMRNQDRAMSNLESIPGGYNALRRMYTDIQDPMLNAASEQFGGNPFASLPG 274 (493)
T ss_pred CCcchhhhcChHHHHHHHHhccCHHHHHHHHhhccccccChhcCccHHHHHHHHhhhccchhhhhcccccCCCCcccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCccCcccccccccCCCccCCCCCCCchhHHHhhhcccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy4586 182 GGNPGRVKAPFRRSKRYLGPRQCARPSSSLSTPVLMNLLNRKQPLWPNAANPQQGQENRDPLPNPWNPGSNPSSPRPGNT 261 (294)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pnpw~~~~~~~~~~~~~~ 261 (294)
++..+. ...... ||++|+||||+....++++....+
T Consensus 275 ~~~s~~-------------------------------------------~~~~~~-eN~~plPn~~~~~~~~s~~a~~~~ 310 (493)
T KOG0010|consen 275 NQGSGT-------------------------------------------GGSPSP-ENNSPLPNPWAQASTTSSPAANPT 310 (493)
T ss_pred ccccCC-------------------------------------------CCCCCc-ccCCCCCCcccCCCCCCCCCCCCC
Confidence 887653 222233 999999999998887776665555
Q ss_pred ccCCCC
Q psy4586 262 TTGTLP 267 (294)
Q Consensus 262 ~~~~~~ 267 (294)
..+...
T Consensus 311 ~~t~G~ 316 (493)
T KOG0010|consen 311 PGTSGG 316 (493)
T ss_pred cCccCc
Confidence 444443
No 2
>smart00727 STI1 Heat shock chaperonin-binding motif.
Probab=97.40 E-value=0.00018 Score=48.94 Aligned_cols=31 Identities=35% Similarity=0.683 Sum_probs=21.8
Q ss_pred hhhCCHHHHhhhc----ChHHHHHHHhhChHHHHH
Q psy4586 68 TILDNPLVQGMLN----DPNSMRNLIMSNPQMQDL 98 (294)
Q Consensus 68 qmMnNP~VQsMLS----NP~lmrqMI~sNPqmqqm 98 (294)
++++||.++++++ ||++++.++.+||++++.
T Consensus 6 ~~l~~P~~~~~l~~~~~nP~~~~~~~~~nP~~~~~ 40 (41)
T smart00727 6 LRLQNPQVQSLLQDMQQNPDMLAQMLQENPQLLQL 40 (41)
T ss_pred HHHcCHHHHHHHHHHHHCHHHHHHHHHhCHHhHhh
Confidence 4666777777655 888888887767777653
No 3
>KOG0010|consensus
Probab=96.92 E-value=0.0061 Score=62.11 Aligned_cols=15 Identities=33% Similarity=0.361 Sum_probs=9.4
Q ss_pred CCCCCCCCCCCCCCC
Q psy4586 241 DPLPNPWNPGSNPSS 255 (294)
Q Consensus 241 ~~~pnpw~~~~~~~~ 255 (294)
.+..|+|....+.++
T Consensus 304 ~~a~~~~~~t~G~~s 318 (493)
T KOG0010|consen 304 SPAANPTPGTSGGTS 318 (493)
T ss_pred CCCCCCCcCccCccc
Confidence 467788866655443
No 4
>smart00727 STI1 Heat shock chaperonin-binding motif.
Probab=96.62 E-value=0.0021 Score=43.63 Aligned_cols=17 Identities=47% Similarity=0.901 Sum_probs=8.7
Q ss_pred ChHHHHHHHHHhhCHHHHH
Q psy4586 111 NPELLRQTMEMARNPSMLQ 129 (294)
Q Consensus 111 NPE~LRQmmemmrNPa~mQ 129 (294)
||++++++++. ||+.++
T Consensus 23 nP~~~~~~~~~--nP~~~~ 39 (41)
T smart00727 23 NPDMLAQMLQE--NPQLLQ 39 (41)
T ss_pred CHHHHHHHHHh--CHHhHh
Confidence 66655554433 555443
No 5
>PF09280 XPC-binding: XPC-binding domain; InterPro: IPR015360 Members of this entry adopt a structure consisting of four alpha helices, arranged in an array. They bind specifically and directly to the xeroderma pigmentosum group C protein (XPC) to initiate nucleotide excision repair []. ; GO: 0003684 damaged DNA binding, 0006289 nucleotide-excision repair, 0043161 proteasomal ubiquitin-dependent protein catabolic process; PDB: 1PVE_A 1QZE_A 1OQY_A 1TP4_A 1X3W_B 3ESW_B 2QSG_X 2QSF_X 1X3Z_B 2QSH_X ....
Probab=96.05 E-value=0.0042 Score=46.68 Aligned_cols=43 Identities=37% Similarity=0.612 Sum_probs=24.1
Q ss_pred hhCCHHHHhh----hcChHHHHHH----HhhChHHHHHHhhChh-hhhccCC
Q psy4586 69 ILDNPLVQGM----LNDPNSMRNL----IMSNPQMQDLIERNPE-INHMLNN 111 (294)
Q Consensus 69 mMnNP~VQsM----LSNP~lmrqM----I~sNPqmqqmmeqNPE-lrqMLnN 111 (294)
+.++|.++.| -+||+++..+ -.+||++.++|++||+ |-++|+.
T Consensus 4 Lr~~Pqf~~lR~~vq~NP~lL~~lLqql~~~nP~l~q~I~~n~e~Fl~ll~~ 55 (59)
T PF09280_consen 4 LRNNPQFQQLRQLVQQNPQLLPPLLQQLGQSNPQLLQLIQQNPEEFLRLLNE 55 (59)
T ss_dssp GTTSHHHHHHHHHHHC-GGGHHHHHHHHHCCSHHHHHHHHHTHHHHHHHHHS
T ss_pred HHcChHHHHHHHHHHHCHHHHHHHHHHHhccCHHHHHHHHHCHHHHHHHHcC
Confidence 4556666553 3777544433 3667777777777753 4444443
No 6
>TIGR00601 rad23 UV excision repair protein Rad23. All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=94.26 E-value=0.057 Score=53.43 Aligned_cols=45 Identities=29% Similarity=0.571 Sum_probs=25.1
Q ss_pred hhhCCHHHHhh----hcChHHHHHHH----hhChHHHHHHhhCh-hhhhccCCh
Q psy4586 68 TILDNPLVQGM----LNDPNSMRNLI----MSNPQMQDLIERNP-EINHMLNNP 112 (294)
Q Consensus 68 qmMnNP~VQsM----LSNP~lmrqMI----~sNPqmqqmmeqNP-ElrqMLnNP 112 (294)
-+.++|.|++| -+||+++..|| ..||++.++|.+|| +|.+||+.+
T Consensus 250 ~Lr~~pqf~~lR~~vq~NP~~L~~lLqql~~~nP~l~q~I~~n~e~Fl~ll~~~ 303 (378)
T TIGR00601 250 FLRNQPQFQQLRQVVQQNPQLLPPLLQQIGQENPQLLQQISQHPEQFLQMLNEP 303 (378)
T ss_pred HhhcCHHHHHHHHHHHHCHHHHHHHHHHHHhhCHHHHHHHHHCHHHHHHHhcCc
Confidence 34456666553 26776665554 45666666666664 355555544
No 7
>PF09280 XPC-binding: XPC-binding domain; InterPro: IPR015360 Members of this entry adopt a structure consisting of four alpha helices, arranged in an array. They bind specifically and directly to the xeroderma pigmentosum group C protein (XPC) to initiate nucleotide excision repair []. ; GO: 0003684 damaged DNA binding, 0006289 nucleotide-excision repair, 0043161 proteasomal ubiquitin-dependent protein catabolic process; PDB: 1PVE_A 1QZE_A 1OQY_A 1TP4_A 1X3W_B 3ESW_B 2QSG_X 2QSF_X 1X3Z_B 2QSH_X ....
Probab=92.33 E-value=0.49 Score=35.62 Aligned_cols=45 Identities=31% Similarity=0.567 Sum_probs=20.8
Q ss_pred hhhcChHHHHHHHhhChHHHHHHhhChhhhhccCChHHHHHHHHHhhCHHHHHHHHHHhH
Q psy4586 77 GMLNDPNSMRNLIMSNPQMQDLIERNPEINHMLNNPELLRQTMEMARNPSMLQELMRTQD 136 (294)
Q Consensus 77 sMLSNP~lmrqMI~sNPqmqqmmeqNPElrqMLnNPE~LRQmmemmrNPa~mQEMMR~QD 136 (294)
.|.++|+| -+||+++++||++. +.+++++ ..+||+.++.+-++++
T Consensus 3 ~Lr~~Pqf--------~~lR~~vq~NP~lL-----~~lLqql--~~~nP~l~q~I~~n~e 47 (59)
T PF09280_consen 3 FLRNNPQF--------QQLRQLVQQNPQLL-----PPLLQQL--GQSNPQLLQLIQQNPE 47 (59)
T ss_dssp GGTTSHHH--------HHHHHHHHC-GGGH-----HHHHHHH--HCCSHHHHHHHHHTHH
T ss_pred HHHcChHH--------HHHHHHHHHCHHHH-----HHHHHHH--hccCHHHHHHHHHCHH
Confidence 45667765 23344444444444 3333333 2445555555544444
No 8
>KOG0011|consensus
Probab=88.47 E-value=0.55 Score=46.29 Aligned_cols=7 Identities=14% Similarity=0.605 Sum_probs=3.2
Q ss_pred cChHHHH
Q psy4586 80 NDPNSMR 86 (294)
Q Consensus 80 SNP~lmr 86 (294)
.||+++.
T Consensus 234 qNP~ll~ 240 (340)
T KOG0011|consen 234 QNPELLH 240 (340)
T ss_pred hCHHHHH
Confidence 4454443
No 9
>TIGR00601 rad23 UV excision repair protein Rad23. All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=85.94 E-value=1.7 Score=43.20 Aligned_cols=18 Identities=28% Similarity=0.580 Sum_probs=13.0
Q ss_pred hhCHHHHHHHHHHhHHHH
Q psy4586 122 ARNPSMLQELMRTQDRAL 139 (294)
Q Consensus 122 mrNPa~mQEMMR~QDrAL 139 (294)
.+||+++|.+.++++.-|
T Consensus 280 ~~nP~l~q~I~~n~e~Fl 297 (378)
T TIGR00601 280 QENPQLLQQISQHPEQFL 297 (378)
T ss_pred hhCHHHHHHHHHCHHHHH
Confidence 567888888777777544
No 10
>KOG0011|consensus
Probab=70.68 E-value=12 Score=37.14 Aligned_cols=37 Identities=38% Similarity=0.619 Sum_probs=21.7
Q ss_pred HHHHhhChhhhhccCChHHHHHHHHHhhCHHHHHHHHHHhHHHH
Q psy4586 96 QDLIERNPEINHMLNNPELLRQTMEMARNPSMLQELMRTQDRAL 139 (294)
Q Consensus 96 qqmmeqNPElrqMLnNPE~LRQmmemmrNPa~mQEMMR~QDrAL 139 (294)
|+|+++||++.| -+|+|+ -.+||+.+|-+.++|+--|
T Consensus 229 R~~iqqNP~ll~-----~~Lqql--g~~nP~L~q~Iq~nqe~Fl 265 (340)
T KOG0011|consen 229 RQMIQQNPELLH-----PLLQQL--GKQNPQLLQLIQENQEAFL 265 (340)
T ss_pred HHHHhhCHHHHH-----HHHHHH--hhhCHHHHHHHHHHHHHHH
Confidence 444555665553 223332 3578888888888886433
No 11
>KOG0548|consensus
Probab=55.88 E-value=23 Score=37.27 Aligned_cols=49 Identities=31% Similarity=0.645 Sum_probs=30.7
Q ss_pred CCH-HHHHhhhCCHHHHhhhcChHHHHHHHhhChHHHHHHhhChhhhhccCChHHHHH
Q psy4586 61 RNP-EMLRTILDNPLVQGMLNDPNSMRNLIMSNPQMQDLIERNPEINHMLNNPELLRQ 117 (294)
Q Consensus 61 ~nP-e~M~qmMnNP~VQsMLSNP~lmrqMI~sNPqmqqmmeqNPElrqMLnNPE~LRQ 117 (294)
.+| +..+..|.+|.||.+|++|-+ ++ +-..++++|-++..|.||.++.+
T Consensus 477 ~~~ee~~~r~~~dpev~~il~d~~m-~~-------~l~q~q~~pa~~~~~~n~~v~~k 526 (539)
T KOG0548|consen 477 ETPEETKRRAMADPEVQAILQDPAM-RQ-------ILEQMQENPALQEHLKNPMVMQK 526 (539)
T ss_pred CCHHHHHHhhccCHHHHHHHcCHHH-HH-------HHHHHHhCHHHHHHHhccHHHHH
Confidence 455 445679999999999999943 32 22335667755555555554443
No 12
>KOG1999|consensus
Probab=39.82 E-value=70 Score=36.13 Aligned_cols=73 Identities=25% Similarity=0.352 Sum_probs=40.3
Q ss_pred hhcccCCCCCCCCC--CCCC--CCCCCCCCCCCCCCCCCCCCCCC-CCccCCC-CCCCCcee----ccCC--ceEEEEee
Q psy4586 219 LLNRKQPLWPNAAN--PQQG--QENRDPLPNPWNPGSNPSSPRPG-NTTTGTL-PANTPTMT----TGQG--GRFWVITD 286 (294)
Q Consensus 219 ~~~~~~~~~~~~~~--~~~~--~~~~~~~pnpw~~~~~~~~~~~~-~~~~~~~-~~~~~~~~----~~~~--~~~~~~~~ 286 (294)
.=++.-|-||.+.+ -.+- ..+.+|-|-||+...+++.+..+ ++.|+-. .+.||-.. .|.| |--|-|.|
T Consensus 848 ~~~~~~~~~~g~~~~~gsa~~~~~~~sps~sp~~~~~~~tpss~s~~p~tpgg~~~~Tpgs~~d~~~~~~~~~~~~~~~d 927 (1024)
T KOG1999|consen 848 TGGGGAPAWPGTPNGNGSAWGPSGQNSPSPSPWGYQNNPTPSSSSYGPKTPGGGNPMTPGSGLDSGSGNGGDGNSSWGPD 927 (1024)
T ss_pred CCCCCCcCCCCCCCCCccccccccCCCCCCCCccCccCCCCcccccCCCCCCCCCCCCCCccccccCCCCCccceEeccc
Confidence 34568899998842 2222 36788888999987777666443 2333322 24444332 0111 44555666
Q ss_pred ecCCC
Q psy4586 287 IYGPT 291 (294)
Q Consensus 287 ~~~~~ 291 (294)
+|+-|
T Consensus 928 ~~~~~ 932 (1024)
T KOG1999|consen 928 TSLDT 932 (1024)
T ss_pred ccccc
Confidence 66544
No 13
>KOG0033|consensus
Probab=31.35 E-value=18 Score=35.70 Aligned_cols=19 Identities=47% Similarity=0.524 Sum_probs=16.0
Q ss_pred cccccccccccchhcccch
Q psy4586 9 GSVCRDVKIHNLLVFFKSI 27 (294)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~ 27 (294)
|-|-|||||||+|.-++.-
T Consensus 130 ~IvHRDvkP~nllLASK~~ 148 (355)
T KOG0033|consen 130 GIVHRDLKPENLLLASKAK 148 (355)
T ss_pred CceeccCChhheeeeeccC
Confidence 5688999999999887653
No 14
>KOG1308|consensus
Probab=30.22 E-value=54 Score=33.20 Aligned_cols=23 Identities=30% Similarity=0.554 Sum_probs=11.9
Q ss_pred HHhhhCCHHHHhhhcChHHHHHH
Q psy4586 66 LRTILDNPLVQGMLNDPNSMRNL 88 (294)
Q Consensus 66 M~qmMnNP~VQsMLSNP~lmrqM 88 (294)
+.++|++|.|---++||+++-.+
T Consensus 321 i~ki~~dpev~aAfqdp~v~aal 343 (377)
T KOG1308|consen 321 ISKILSDPEVAAAFQDPEVQAAL 343 (377)
T ss_pred HhhhcCchHHHHhhcChHHHhhh
Confidence 34555555555555555554433
No 15
>COG2967 ApaG Uncharacterized protein affecting Mg2+/Co2+ transport [Inorganic ion transport and metabolism]
Probab=27.70 E-value=33 Score=29.84 Aligned_cols=12 Identities=50% Similarity=0.936 Sum_probs=9.9
Q ss_pred CceEEEEeeecC
Q psy4586 278 GGRFWVITDIYG 289 (294)
Q Consensus 278 ~~~~~~~~~~~~ 289 (294)
=+|+|.|||--|
T Consensus 47 lsR~W~ITd~~g 58 (126)
T COG2967 47 LSRYWLITDGNG 58 (126)
T ss_pred eeeEEEEecCCC
Confidence 379999999765
No 16
>KOG0665|consensus
Probab=23.77 E-value=30 Score=34.80 Aligned_cols=20 Identities=30% Similarity=0.366 Sum_probs=16.2
Q ss_pred ecccccccccccchhcccch
Q psy4586 8 YGSVCRDVKIHNLLVFFKSI 27 (294)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~ 27 (294)
-|-.|||+||||.+|-..-.
T Consensus 137 ~~IihRdLkPsnivv~~~~~ 156 (369)
T KOG0665|consen 137 AGIIHRDLKPSNIVVNSDCT 156 (369)
T ss_pred cceeecccCcccceecchhh
Confidence 46789999999999876543
No 17
>PF14327 CSTF2_hinge: Hinge domain of cleavage stimulation factor subunit 2; PDB: 4EBA_G.
Probab=23.37 E-value=62 Score=25.53 Aligned_cols=17 Identities=35% Similarity=0.765 Sum_probs=9.5
Q ss_pred cChHHHHHHHhhChHHH
Q psy4586 80 NDPNSMRNLIMSNPQMQ 96 (294)
Q Consensus 80 SNP~lmrqMI~sNPqmq 96 (294)
.||+.+|+++..||++-
T Consensus 44 ~~p~~ar~lL~~nPqLa 60 (84)
T PF14327_consen 44 QNPEQARQLLQQNPQLA 60 (84)
T ss_dssp ----HHHHHHHS-THHH
T ss_pred hCHHHHHHHHHHCcHHH
Confidence 78888888888888874
No 18
>COG2810 Predicted type IV restriction endonuclease [Defense mechanisms]
Probab=23.36 E-value=48 Score=32.15 Aligned_cols=15 Identities=33% Similarity=1.037 Sum_probs=12.5
Q ss_pred CCceEEEEeeecCCC
Q psy4586 277 QGGRFWVITDIYGPT 291 (294)
Q Consensus 277 ~~~~~~~~~~~~~~~ 291 (294)
+.||+|+|.|.|-|-
T Consensus 104 tnGrvWiV~d~~r~G 118 (284)
T COG2810 104 TNGRVWIVVDAFRPG 118 (284)
T ss_pred eCCeEEEEEecccCC
Confidence 469999999999763
No 19
>KOG2857|consensus
Probab=20.62 E-value=3.5e+02 Score=24.40 Aligned_cols=23 Identities=30% Similarity=0.657 Sum_probs=10.7
Q ss_pred HHHHHHHhhChHHHHHHhhChhhh
Q psy4586 83 NSMRNLIMSNPQMQDLIERNPEIN 106 (294)
Q Consensus 83 ~lmrqMI~sNPqmqqmmeqNPElr 106 (294)
..+|.++ -||.+|++|+++-+..
T Consensus 88 seLrsll-~dp~Lr~Li~sid~~~ 110 (157)
T KOG2857|consen 88 SELRSLL-EDPHLRNLIESIDELL 110 (157)
T ss_pred HHHHHHH-hCHHHHHHHHHHHHHh
Confidence 3444443 2455555555444443
Done!