Query psy4592
Match_columns 197
No_of_seqs 135 out of 1922
Neff 9.3
Searched_HMMs 29240
Date Fri Aug 16 20:53:10 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4592.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/4592hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3o4f_A Spermidine synthase; am 100.0 1.4E-35 4.6E-40 234.5 14.4 193 4-196 22-223 (294)
2 3adn_A Spermidine synthase; am 100.0 7.8E-34 2.7E-38 226.5 13.8 195 2-196 20-223 (294)
3 1iy9_A Spermidine synthase; ro 100.0 1.9E-32 6.5E-37 216.8 18.0 195 2-196 12-214 (275)
4 2i7c_A Spermidine synthase; tr 100.0 2.8E-31 9.5E-36 211.0 20.5 195 2-196 15-217 (283)
5 2o07_A Spermidine synthase; st 100.0 3.9E-31 1.3E-35 212.0 16.4 195 2-196 32-234 (304)
6 2b2c_A Spermidine synthase; be 100.0 5.8E-31 2E-35 211.7 17.2 195 2-196 45-247 (314)
7 2pt6_A Spermidine synthase; tr 100.0 4.1E-30 1.4E-34 207.5 19.5 195 2-196 53-255 (321)
8 1inl_A Spermidine synthase; be 100.0 1.4E-30 4.8E-35 208.1 15.8 195 2-196 27-230 (296)
9 1mjf_A Spermidine synthase; sp 100.0 4.6E-30 1.6E-34 203.7 18.6 192 2-196 12-218 (281)
10 1uir_A Polyamine aminopropyltr 100.0 2E-30 7E-35 208.8 15.4 195 2-196 14-221 (314)
11 2qfm_A Spermine synthase; sper 100.0 1.2E-29 4.1E-34 205.4 18.9 191 2-197 127-339 (364)
12 1xj5_A Spermidine synthase 1; 100.0 1.7E-29 5.8E-34 204.7 19.3 193 2-194 57-258 (334)
13 3bwc_A Spermidine synthase; SA 100.0 2E-29 6.9E-34 202.1 17.7 195 2-196 29-236 (304)
14 3c6k_A Spermine synthase; sper 100.0 4.9E-29 1.7E-33 202.5 17.1 191 2-196 144-355 (381)
15 3gjy_A Spermidine synthase; AP 100.0 3.2E-28 1.1E-32 194.8 16.2 171 21-196 42-224 (317)
16 2cmg_A Spermidine synthase; tr 100.0 2.1E-28 7.2E-33 192.2 9.8 179 2-196 10-196 (262)
17 4gek_A TRNA (CMO5U34)-methyltr 99.8 6.6E-19 2.3E-23 138.1 8.4 109 55-171 68-178 (261)
18 3orh_A Guanidinoacetate N-meth 99.8 1.3E-18 4.4E-23 134.5 9.9 109 56-170 59-169 (236)
19 3p9n_A Possible methyltransfer 99.8 9.9E-18 3.4E-22 124.9 14.1 110 56-173 43-155 (189)
20 3dxy_A TRNA (guanine-N(7)-)-me 99.8 9.7E-18 3.3E-22 128.1 12.5 125 57-189 34-164 (218)
21 2fca_A TRNA (guanine-N(7)-)-me 99.7 6.9E-17 2.4E-21 122.8 13.5 113 57-173 38-155 (213)
22 2ozv_A Hypothetical protein AT 99.7 1.1E-17 3.9E-22 130.9 9.4 132 56-193 35-187 (260)
23 3mti_A RRNA methylase; SAM-dep 99.7 4.9E-17 1.7E-21 120.5 11.9 112 56-173 21-137 (185)
24 4hg2_A Methyltransferase type 99.7 1.4E-17 4.7E-22 130.3 9.2 114 56-187 38-151 (257)
25 1yzh_A TRNA (guanine-N(7)-)-me 99.7 7.7E-17 2.6E-21 122.4 12.7 127 56-190 40-171 (214)
26 3hm2_A Precorrin-6Y C5,15-meth 99.7 1.5E-16 5.2E-21 116.8 13.7 120 56-191 24-143 (178)
27 4dzr_A Protein-(glutamine-N5) 99.7 2E-17 6.8E-22 124.8 8.5 133 56-195 29-187 (215)
28 3ckk_A TRNA (guanine-N(7)-)-me 99.7 7.8E-17 2.7E-21 124.4 11.8 118 56-173 45-170 (235)
29 3e05_A Precorrin-6Y C5,15-meth 99.7 8.2E-17 2.8E-21 121.2 11.1 120 56-191 39-158 (204)
30 1dus_A MJ0882; hypothetical pr 99.7 7.2E-17 2.5E-21 119.7 10.0 128 56-196 51-178 (194)
31 3dr5_A Putative O-methyltransf 99.7 3.6E-17 1.2E-21 125.2 8.4 103 59-170 58-162 (221)
32 3lpm_A Putative methyltransfer 99.7 1.2E-16 4E-21 124.9 11.5 111 57-171 49-176 (259)
33 3ntv_A MW1564 protein; rossman 99.7 7.8E-17 2.7E-21 124.0 9.9 105 56-170 70-175 (232)
34 3kkz_A Uncharacterized protein 99.7 7.6E-17 2.6E-21 126.2 9.9 107 56-172 45-151 (267)
35 3tfw_A Putative O-methyltransf 99.7 1.9E-16 6.4E-21 123.1 11.8 106 56-171 62-170 (248)
36 1pjz_A Thiopurine S-methyltran 99.7 2.2E-17 7.5E-22 124.7 6.0 111 56-170 21-139 (203)
37 3f4k_A Putative methyltransfer 99.7 1.1E-16 3.9E-21 124.3 10.1 106 56-171 45-150 (257)
38 2ift_A Putative methylase HI07 99.7 8.3E-17 2.9E-21 121.3 8.8 110 57-174 53-166 (201)
39 3evz_A Methyltransferase; NYSG 99.7 5.2E-17 1.8E-21 124.4 7.5 127 56-191 54-196 (230)
40 1zx0_A Guanidinoacetate N-meth 99.7 1.2E-16 4.2E-21 123.0 9.5 109 56-170 59-169 (236)
41 3dlc_A Putative S-adenosyl-L-m 99.7 1.3E-16 4.3E-21 120.7 9.3 106 57-171 43-148 (219)
42 2fpo_A Methylase YHHF; structu 99.7 2.1E-16 7.3E-21 119.1 10.3 107 57-173 54-162 (202)
43 3u81_A Catechol O-methyltransf 99.7 2.1E-16 7.2E-21 120.6 10.2 108 56-171 57-170 (221)
44 2gb4_A Thiopurine S-methyltran 99.7 1.4E-16 4.8E-21 124.2 9.3 111 56-170 67-190 (252)
45 3dtn_A Putative methyltransfer 99.7 2.8E-16 9.7E-21 120.5 10.8 106 56-171 43-148 (234)
46 3duw_A OMT, O-methyltransferas 99.7 3.7E-16 1.3E-20 119.1 11.1 106 56-171 57-167 (223)
47 3njr_A Precorrin-6Y methylase; 99.7 7.6E-16 2.6E-20 116.3 12.6 117 56-191 54-170 (204)
48 3eey_A Putative rRNA methylase 99.7 2E-16 6.8E-21 118.3 9.2 115 56-173 21-141 (197)
49 1sui_A Caffeoyl-COA O-methyltr 99.7 3.1E-16 1E-20 121.9 10.4 105 56-170 78-189 (247)
50 2esr_A Methyltransferase; stru 99.7 1.2E-16 4.1E-21 117.6 7.6 109 56-173 30-140 (177)
51 1vl5_A Unknown conserved prote 99.7 1.8E-16 6.1E-21 123.6 9.0 105 56-171 36-140 (260)
52 3jwh_A HEN1; methyltransferase 99.7 4E-16 1.4E-20 118.5 10.6 111 56-171 28-141 (217)
53 2b3t_A Protein methyltransfera 99.7 4.1E-16 1.4E-20 122.9 10.9 110 56-171 108-238 (276)
54 3tr6_A O-methyltransferase; ce 99.7 2.9E-16 9.9E-21 119.8 9.6 104 57-170 64-173 (225)
55 4htf_A S-adenosylmethionine-de 99.7 3.3E-16 1.1E-20 123.7 10.1 107 56-171 67-173 (285)
56 3fpf_A Mtnas, putative unchara 99.7 3.5E-16 1.2E-20 123.8 10.1 102 55-171 120-222 (298)
57 3ofk_A Nodulation protein S; N 99.7 1.6E-16 5.4E-21 120.5 7.8 105 56-171 50-154 (216)
58 2p7i_A Hypothetical protein; p 99.7 7E-16 2.4E-20 118.7 11.5 101 57-173 42-143 (250)
59 1nt2_A Fibrillarin-like PRE-rR 99.7 6.8E-16 2.3E-20 117.2 11.2 104 56-171 56-161 (210)
60 3jwg_A HEN1, methyltransferase 99.7 7.2E-16 2.5E-20 117.1 11.4 112 56-172 28-142 (219)
61 2fhp_A Methylase, putative; al 99.7 3.7E-16 1.3E-20 115.6 9.5 110 56-174 43-157 (187)
62 3g5l_A Putative S-adenosylmeth 99.7 6.2E-16 2.1E-20 120.0 10.8 103 56-171 43-145 (253)
63 3g5t_A Trans-aconitate 3-methy 99.7 2.2E-16 7.5E-21 125.7 8.4 108 56-171 35-149 (299)
64 3gu3_A Methyltransferase; alph 99.7 4.8E-16 1.6E-20 122.9 10.1 107 56-173 21-128 (284)
65 3r3h_A O-methyltransferase, SA 99.7 8E-17 2.7E-21 124.8 5.5 105 56-170 59-169 (242)
66 1nkv_A Hypothetical protein YJ 99.6 2.8E-16 9.7E-21 121.9 8.4 106 56-171 35-140 (256)
67 4dcm_A Ribosomal RNA large sub 99.6 3.3E-16 1.1E-20 128.6 9.2 117 56-176 221-339 (375)
68 2b78_A Hypothetical protein SM 99.6 1.6E-15 5.5E-20 125.0 13.3 128 56-186 211-346 (385)
69 3hem_A Cyclopropane-fatty-acyl 99.6 8.6E-16 2.9E-20 122.4 11.0 110 56-173 71-185 (302)
70 3dmg_A Probable ribosomal RNA 99.6 5E-16 1.7E-20 127.8 9.9 112 57-176 233-345 (381)
71 3c3p_A Methyltransferase; NP_9 99.6 4.8E-16 1.6E-20 117.6 9.0 103 57-170 56-159 (210)
72 4df3_A Fibrillarin-like rRNA/T 99.6 1.9E-15 6.4E-20 116.1 12.3 159 21-191 38-207 (233)
73 1xdz_A Methyltransferase GIDB; 99.6 1.2E-15 4.2E-20 117.8 11.4 120 57-190 70-191 (240)
74 3mgg_A Methyltransferase; NYSG 99.6 3.9E-16 1.3E-20 122.6 8.8 107 56-171 36-142 (276)
75 1ws6_A Methyltransferase; stru 99.6 2.8E-16 9.4E-21 114.6 7.3 104 57-173 41-149 (171)
76 3ajd_A Putative methyltransfer 99.6 1E-15 3.6E-20 120.6 11.0 117 56-176 82-216 (274)
77 3g89_A Ribosomal RNA small sub 99.6 1.4E-15 4.8E-20 118.3 11.5 106 56-173 79-186 (249)
78 1xxl_A YCGJ protein; structura 99.6 9.8E-16 3.3E-20 118.1 10.4 105 56-171 20-124 (239)
79 3c3y_A Pfomt, O-methyltransfer 99.6 5.6E-16 1.9E-20 119.7 8.8 105 56-170 69-180 (237)
80 3bus_A REBM, methyltransferase 99.6 1.8E-15 6E-20 118.6 11.7 107 56-171 60-166 (273)
81 4dmg_A Putative uncharacterize 99.6 2E-15 7E-20 124.5 12.5 123 56-185 213-340 (393)
82 3mb5_A SAM-dependent methyltra 99.6 6.7E-16 2.3E-20 120.0 8.9 119 55-191 91-210 (255)
83 3ujc_A Phosphoethanolamine N-m 99.6 5.3E-16 1.8E-20 120.8 8.3 106 56-171 54-159 (266)
84 2p35_A Trans-aconitate 2-methy 99.6 5.7E-16 2E-20 120.3 8.4 103 56-173 32-134 (259)
85 3dli_A Methyltransferase; PSI- 99.6 1.9E-15 6.3E-20 116.5 11.2 102 56-173 40-142 (240)
86 1l3i_A Precorrin-6Y methyltran 99.6 6.2E-15 2.1E-19 109.0 13.0 119 56-191 32-150 (192)
87 2igt_A SAM dependent methyltra 99.6 3.8E-15 1.3E-19 120.4 12.7 126 57-186 153-288 (332)
88 3dh0_A SAM dependent methyltra 99.6 3.7E-16 1.2E-20 118.6 6.4 107 56-171 36-143 (219)
89 2yqz_A Hypothetical protein TT 99.6 1.2E-15 4.1E-20 118.7 9.3 103 56-170 38-140 (263)
90 2frn_A Hypothetical protein PH 99.6 2.3E-16 7.7E-21 124.7 5.2 122 56-191 124-247 (278)
91 3l8d_A Methyltransferase; stru 99.6 1.6E-15 5.4E-20 116.7 9.7 103 56-172 52-154 (242)
92 3hnr_A Probable methyltransfer 99.6 1.9E-15 6.4E-20 114.7 9.9 112 43-171 34-145 (220)
93 3h2b_A SAM-dependent methyltra 99.6 2.2E-15 7.4E-20 113.1 9.8 101 58-172 42-142 (203)
94 2vdv_E TRNA (guanine-N(7)-)-me 99.6 2.4E-15 8.2E-20 116.6 10.2 117 57-173 49-175 (246)
95 2ex4_A Adrenal gland protein A 99.6 6.7E-16 2.3E-20 119.1 7.1 107 57-171 79-185 (241)
96 1ve3_A Hypothetical protein PH 99.6 9.6E-16 3.3E-20 116.7 7.8 105 57-171 38-142 (227)
97 3g07_A 7SK snRNA methylphospha 99.6 7.2E-16 2.5E-20 122.5 7.2 113 57-171 46-220 (292)
98 2yxd_A Probable cobalt-precorr 99.6 4.4E-14 1.5E-18 103.7 16.3 114 56-191 34-147 (183)
99 3ccf_A Cyclopropane-fatty-acyl 99.6 2.5E-15 8.6E-20 118.3 10.0 101 56-173 56-156 (279)
100 1wxx_A TT1595, hypothetical pr 99.6 4.4E-15 1.5E-19 122.3 11.8 129 57-191 209-346 (382)
101 3ou2_A SAM-dependent methyltra 99.6 1.7E-15 5.9E-20 114.5 8.6 104 56-173 45-148 (218)
102 3c0k_A UPF0064 protein YCCW; P 99.6 1.2E-14 4.2E-19 120.1 14.2 132 56-190 219-359 (396)
103 2avd_A Catechol-O-methyltransf 99.6 3.7E-15 1.3E-19 113.9 10.2 105 56-170 68-178 (229)
104 3sm3_A SAM-dependent methyltra 99.6 4.4E-15 1.5E-19 113.4 10.5 113 56-172 29-142 (235)
105 3m70_A Tellurite resistance pr 99.6 1.5E-15 5E-20 120.0 8.0 104 57-171 120-223 (286)
106 2nxc_A L11 mtase, ribosomal pr 99.6 3.8E-15 1.3E-19 116.1 10.1 116 56-191 119-234 (254)
107 4fsd_A Arsenic methyltransfera 99.6 1E-15 3.6E-20 126.0 7.1 112 56-171 82-203 (383)
108 3lcc_A Putative methyl chlorid 99.6 1.7E-15 5.9E-20 116.3 7.8 107 57-172 66-172 (235)
109 1kpg_A CFA synthase;, cyclopro 99.6 4.7E-15 1.6E-19 117.1 10.5 107 56-172 63-169 (287)
110 1nv8_A HEMK protein; class I a 99.6 5.8E-15 2E-19 117.0 11.0 109 57-172 123-250 (284)
111 3lbf_A Protein-L-isoaspartate 99.6 4.9E-15 1.7E-19 111.8 10.1 101 56-173 76-176 (210)
112 2gpy_A O-methyltransferase; st 99.6 1.5E-15 5.1E-20 116.6 7.3 105 56-170 53-159 (233)
113 1xtp_A LMAJ004091AAA; SGPP, st 99.6 2.4E-15 8.3E-20 116.4 8.6 106 56-171 92-197 (254)
114 3ocj_A Putative exported prote 99.6 9.9E-16 3.4E-20 122.3 6.3 110 56-171 117-227 (305)
115 2xvm_A Tellurite resistance pr 99.6 2E-15 6.9E-20 112.5 7.6 106 56-171 31-136 (199)
116 3bkw_A MLL3908 protein, S-aden 99.6 4.5E-15 1.5E-19 114.1 9.6 103 56-171 42-144 (243)
117 3dou_A Ribosomal RNA large sub 99.6 3.3E-15 1.1E-19 111.8 8.6 133 41-196 11-160 (191)
118 1g8a_A Fibrillarin-like PRE-rR 99.6 1.4E-14 4.9E-19 110.6 12.4 105 55-171 71-178 (227)
119 2o57_A Putative sarcosine dime 99.6 1.3E-15 4.4E-20 120.9 6.5 107 56-171 81-187 (297)
120 3grz_A L11 mtase, ribosomal pr 99.6 4.1E-15 1.4E-19 111.9 9.0 132 24-171 28-159 (205)
121 3m6w_A RRNA methylase; rRNA me 99.6 4.4E-15 1.5E-19 124.6 9.9 132 56-194 100-250 (464)
122 3a27_A TYW2, uncharacterized p 99.6 2.6E-15 8.9E-20 118.2 8.1 122 56-191 118-240 (272)
123 2pxx_A Uncharacterized protein 99.6 2.2E-15 7.5E-20 113.6 7.3 110 56-173 41-161 (215)
124 2pjd_A Ribosomal RNA small sub 99.6 7.5E-16 2.6E-20 125.1 5.0 111 57-175 196-307 (343)
125 3ggd_A SAM-dependent methyltra 99.6 5.1E-15 1.8E-19 114.2 9.5 105 56-171 55-163 (245)
126 2as0_A Hypothetical protein PH 99.6 1.1E-14 3.8E-19 120.4 12.1 125 57-185 217-349 (396)
127 3e8s_A Putative SAM dependent 99.6 1.1E-14 3.8E-19 110.5 11.1 101 56-173 51-154 (227)
128 3cbg_A O-methyltransferase; cy 99.6 3.5E-15 1.2E-19 114.8 8.3 104 57-170 72-181 (232)
129 3i9f_A Putative type 11 methyl 99.6 4.1E-15 1.4E-19 108.5 8.3 97 56-171 16-112 (170)
130 2p8j_A S-adenosylmethionine-de 99.6 8.9E-16 3.1E-20 115.5 4.8 119 43-172 11-129 (209)
131 3v97_A Ribosomal RNA large sub 99.6 1.9E-14 6.5E-19 126.7 14.0 115 57-174 539-660 (703)
132 3thr_A Glycine N-methyltransfe 99.6 1.9E-15 6.5E-20 119.6 6.3 115 56-172 56-176 (293)
133 2vdw_A Vaccinia virus capping 99.6 3.8E-15 1.3E-19 119.0 8.1 114 57-173 48-171 (302)
134 2plw_A Ribosomal RNA methyltra 99.6 8.6E-15 2.9E-19 109.6 9.3 133 43-196 10-175 (201)
135 1ixk_A Methyltransferase; open 99.6 1.1E-14 3.9E-19 116.9 10.4 115 56-175 117-250 (315)
136 3vc1_A Geranyl diphosphate 2-C 99.6 5.1E-15 1.7E-19 118.5 8.2 106 56-171 116-221 (312)
137 2hnk_A SAM-dependent O-methylt 99.6 6.4E-15 2.2E-19 113.6 8.4 106 56-171 59-181 (239)
138 3tma_A Methyltransferase; thum 99.6 1.1E-14 3.9E-19 118.6 10.3 114 55-173 201-319 (354)
139 3pfg_A N-methyltransferase; N, 99.6 5.1E-15 1.7E-19 115.5 7.8 101 56-170 49-150 (263)
140 1fbn_A MJ fibrillarin homologu 99.6 1.3E-14 4.4E-19 111.3 9.7 102 56-170 73-177 (230)
141 1jsx_A Glucose-inhibited divis 99.6 8.2E-15 2.8E-19 110.2 8.4 103 57-173 65-167 (207)
142 2fk8_A Methoxy mycolic acid sy 99.6 1.8E-14 6.3E-19 115.4 11.0 108 56-173 89-196 (318)
143 3m4x_A NOL1/NOP2/SUN family pr 99.6 8.9E-15 3E-19 122.6 9.4 117 56-176 104-239 (456)
144 3g2m_A PCZA361.24; SAM-depende 99.6 4.4E-15 1.5E-19 118.1 7.2 111 56-173 81-192 (299)
145 3e23_A Uncharacterized protein 99.6 1.3E-14 4.5E-19 109.5 9.5 101 56-172 42-142 (211)
146 2qe6_A Uncharacterized protein 99.6 4.4E-14 1.5E-18 111.3 12.8 109 57-173 77-198 (274)
147 2aot_A HMT, histamine N-methyl 99.6 7E-15 2.4E-19 116.7 8.2 110 57-171 52-172 (292)
148 1o54_A SAM-dependent O-methylt 99.6 7.6E-15 2.6E-19 115.6 8.3 117 56-190 111-228 (277)
149 3gdh_A Trimethylguanosine synt 99.6 4.6E-16 1.6E-20 119.9 1.2 103 57-170 78-180 (241)
150 1yb2_A Hypothetical protein TA 99.6 8.4E-15 2.9E-19 115.3 8.3 118 56-191 109-227 (275)
151 3p2e_A 16S rRNA methylase; met 99.6 1.9E-15 6.5E-20 115.9 4.3 110 56-169 23-137 (225)
152 2gs9_A Hypothetical protein TT 99.6 1.6E-14 5.4E-19 109.0 9.3 99 57-173 36-134 (211)
153 3q87_B N6 adenine specific DNA 99.5 2.2E-14 7.7E-19 105.1 9.7 96 57-171 23-123 (170)
154 3d2l_A SAM-dependent methyltra 99.5 6.8E-15 2.3E-19 113.1 7.1 105 57-172 33-138 (243)
155 3ege_A Putative methyltransfer 99.5 1.2E-14 4.1E-19 113.5 8.5 99 56-172 33-131 (261)
156 3k6r_A Putative transferase PH 99.5 4.7E-15 1.6E-19 116.8 6.1 102 56-171 124-225 (278)
157 1wzn_A SAM-dependent methyltra 99.5 7.7E-15 2.6E-19 113.6 7.2 106 56-172 40-146 (252)
158 1ej0_A FTSJ; methyltransferase 99.5 1.1E-14 3.8E-19 106.1 7.7 121 56-195 21-156 (180)
159 1y8c_A S-adenosylmethionine-de 99.5 5.5E-15 1.9E-19 113.6 6.2 106 57-172 37-143 (246)
160 3uwp_A Histone-lysine N-methyl 99.5 2.7E-14 9.1E-19 117.4 10.5 110 56-170 172-287 (438)
161 2ipx_A RRNA 2'-O-methyltransfe 99.5 1.2E-14 4.1E-19 111.6 8.1 104 56-171 76-182 (233)
162 3fzg_A 16S rRNA methylase; met 99.5 4.4E-15 1.5E-19 110.0 5.3 104 56-170 48-151 (200)
163 2pwy_A TRNA (adenine-N(1)-)-me 99.5 1.4E-14 4.7E-19 112.5 8.4 119 56-191 95-214 (258)
164 3iv6_A Putative Zn-dependent a 99.5 3.1E-14 1.1E-18 111.3 10.3 106 56-173 44-150 (261)
165 2kw5_A SLR1183 protein; struct 99.5 7.7E-15 2.6E-19 110.0 6.6 101 60-172 32-132 (202)
166 3q7e_A Protein arginine N-meth 99.5 1.3E-14 4.3E-19 118.2 8.1 109 56-171 65-173 (349)
167 2b25_A Hypothetical protein; s 99.5 1.5E-14 5E-19 117.1 8.4 122 56-190 104-234 (336)
168 1ri5_A MRNA capping enzyme; me 99.5 6.5E-15 2.2E-19 116.5 5.9 111 56-173 63-176 (298)
169 1o9g_A RRNA methyltransferase; 99.5 8.2E-15 2.8E-19 113.7 6.3 114 57-171 51-214 (250)
170 1dl5_A Protein-L-isoaspartate 99.5 2.6E-14 8.8E-19 114.8 9.3 103 56-173 74-177 (317)
171 3cgg_A SAM-dependent methyltra 99.5 6.1E-14 2.1E-18 103.9 10.6 104 56-173 45-149 (195)
172 3id6_C Fibrillarin-like rRNA/T 99.5 3.6E-14 1.2E-18 109.1 9.6 115 45-171 64-181 (232)
173 3r0q_C Probable protein argini 99.5 2.9E-14 9.8E-19 117.2 9.5 108 56-171 62-169 (376)
174 1i9g_A Hypothetical protein RV 99.5 2.7E-14 9.3E-19 112.3 8.9 120 56-190 98-218 (280)
175 2frx_A Hypothetical protein YE 99.5 3.1E-14 1.1E-18 120.2 9.7 116 57-176 117-251 (479)
176 3m33_A Uncharacterized protein 99.5 7.3E-15 2.5E-19 112.4 5.2 93 56-169 47-140 (226)
177 1vbf_A 231AA long hypothetical 99.5 7.2E-14 2.5E-18 106.8 10.7 99 56-173 69-167 (231)
178 2nyu_A Putative ribosomal RNA 99.5 3E-14 1E-18 106.2 8.3 121 56-195 21-165 (196)
179 2fyt_A Protein arginine N-meth 99.5 4.2E-14 1.4E-18 114.7 9.6 107 56-169 63-169 (340)
180 2bm8_A Cephalosporin hydroxyla 99.5 9.3E-15 3.2E-19 112.8 5.3 99 57-171 81-187 (236)
181 2yxe_A Protein-L-isoaspartate 99.5 4.5E-14 1.5E-18 106.8 8.9 103 56-173 76-179 (215)
182 1u2z_A Histone-lysine N-methyl 99.5 4.7E-14 1.6E-18 117.4 9.7 108 56-170 241-358 (433)
183 2yvl_A TRMI protein, hypotheti 99.5 4E-14 1.4E-18 109.2 8.8 119 56-193 90-208 (248)
184 1wy7_A Hypothetical protein PH 99.5 1E-12 3.4E-17 98.8 16.2 100 56-169 48-147 (207)
185 2i62_A Nicotinamide N-methyltr 99.5 8E-15 2.7E-19 114.1 4.6 115 56-171 55-198 (265)
186 3kr9_A SAM-dependent methyltra 99.5 7E-14 2.4E-18 106.8 9.3 107 56-172 14-120 (225)
187 1jg1_A PIMT;, protein-L-isoasp 99.5 8.3E-14 2.8E-18 107.1 9.5 103 56-174 90-192 (235)
188 1sqg_A SUN protein, FMU protei 99.5 6.5E-14 2.2E-18 116.9 9.6 115 56-175 245-378 (429)
189 2yx1_A Hypothetical protein MJ 99.5 3.4E-14 1.2E-18 115.1 7.6 102 56-175 194-295 (336)
190 2h00_A Methyltransferase 10 do 99.5 4.3E-14 1.5E-18 109.8 7.7 83 57-142 65-152 (254)
191 3bkx_A SAM-dependent methyltra 99.5 6.7E-14 2.3E-18 109.6 8.8 110 56-172 42-160 (275)
192 3dp7_A SAM-dependent methyltra 99.5 4.8E-14 1.6E-18 115.3 8.2 109 56-171 178-287 (363)
193 3bgv_A MRNA CAP guanine-N7 met 99.5 2.1E-14 7.2E-19 114.9 5.9 115 57-173 34-157 (313)
194 2oxt_A Nucleoside-2'-O-methylt 99.5 2E-14 6.8E-19 112.8 5.6 129 56-196 73-208 (265)
195 2pbf_A Protein-L-isoaspartate 99.5 8.5E-14 2.9E-18 106.2 8.9 107 56-172 79-194 (227)
196 2a14_A Indolethylamine N-methy 99.5 3.4E-15 1.2E-19 116.9 0.9 114 56-171 54-197 (263)
197 2qm3_A Predicted methyltransfe 99.5 6.4E-14 2.2E-18 114.9 8.5 105 57-171 172-278 (373)
198 2wa2_A Non-structural protein 99.5 2.4E-14 8.3E-19 112.9 5.8 128 56-195 81-215 (276)
199 3lec_A NADB-rossmann superfami 99.5 1E-13 3.5E-18 106.1 9.0 107 56-172 20-126 (230)
200 3mq2_A 16S rRNA methyltransfer 99.5 2.4E-14 8.2E-19 108.6 5.3 110 56-171 26-140 (218)
201 4hc4_A Protein arginine N-meth 99.5 4.5E-14 1.5E-18 115.6 7.0 107 57-171 83-189 (376)
202 1i1n_A Protein-L-isoaspartate 99.5 1.7E-13 5.8E-18 104.5 9.8 120 42-173 63-184 (226)
203 1r18_A Protein-L-isoaspartate( 99.5 4.9E-14 1.7E-18 107.7 6.7 121 41-173 69-196 (227)
204 2avn_A Ubiquinone/menaquinone 99.5 9.2E-14 3.1E-18 108.3 8.2 100 57-173 54-154 (260)
205 3cc8_A Putative methyltransfer 99.5 7.9E-14 2.7E-18 105.9 7.6 100 56-172 31-131 (230)
206 1g6q_1 HnRNP arginine N-methyl 99.5 9.8E-14 3.3E-18 112.0 8.4 107 56-169 37-143 (328)
207 3gnl_A Uncharacterized protein 99.5 1.5E-13 5.1E-18 106.1 8.9 107 56-172 20-126 (244)
208 3bxo_A N,N-dimethyltransferase 99.5 3.8E-14 1.3E-18 108.6 5.6 102 56-171 39-141 (239)
209 2g72_A Phenylethanolamine N-me 99.5 9.1E-15 3.1E-19 115.7 1.9 113 57-170 71-214 (289)
210 3bt7_A TRNA (uracil-5-)-methyl 99.5 5.4E-13 1.8E-17 109.3 12.2 102 58-175 214-330 (369)
211 1ne2_A Hypothetical protein TA 99.5 4.2E-13 1.4E-17 100.5 10.6 90 56-161 50-139 (200)
212 1p91_A Ribosomal RNA large sub 99.5 1.3E-13 4.5E-18 107.8 8.1 97 56-173 84-180 (269)
213 2yxl_A PH0851 protein, 450AA l 99.5 1.3E-13 4.3E-18 115.8 8.2 117 56-176 258-394 (450)
214 3mcz_A O-methyltransferase; ad 99.5 6.3E-14 2.2E-18 113.8 6.1 108 58-171 180-287 (352)
215 2y1w_A Histone-arginine methyl 99.5 2.6E-13 8.8E-18 110.4 9.5 107 56-171 49-155 (348)
216 2p41_A Type II methyltransfera 99.5 1E-13 3.5E-18 110.8 7.0 125 56-195 81-213 (305)
217 3i53_A O-methyltransferase; CO 99.4 8.2E-14 2.8E-18 112.4 6.5 106 57-171 169-274 (332)
218 3hp7_A Hemolysin, putative; st 99.4 2E-13 7E-18 108.0 8.5 126 26-170 55-184 (291)
219 1vlm_A SAM-dependent methyltra 99.4 2.3E-13 8E-18 103.3 8.4 93 58-172 48-140 (219)
220 3sso_A Methyltransferase; macr 99.4 1E-13 3.4E-18 113.6 6.2 97 56-170 215-323 (419)
221 3giw_A Protein of unknown func 99.4 1.4E-12 4.7E-17 102.2 12.4 128 57-189 78-218 (277)
222 2f8l_A Hypothetical protein LM 99.4 4.7E-14 1.6E-18 114.5 4.2 126 57-189 130-274 (344)
223 4e2x_A TCAB9; kijanose, tetron 99.4 1.7E-13 5.9E-18 113.7 7.4 103 56-171 106-208 (416)
224 3gwz_A MMCR; methyltransferase 99.4 3.3E-13 1.1E-17 110.5 8.9 107 56-171 201-307 (369)
225 3htx_A HEN1; HEN1, small RNA m 99.4 6.2E-13 2.1E-17 117.0 11.1 112 56-171 720-834 (950)
226 3tm4_A TRNA (guanine N2-)-meth 99.4 9.8E-13 3.4E-17 107.9 11.2 110 55-171 215-329 (373)
227 1qzz_A RDMB, aclacinomycin-10- 99.4 3.6E-13 1.2E-17 110.2 8.3 108 56-172 181-288 (374)
228 2dul_A N(2),N(2)-dimethylguano 99.4 5.5E-13 1.9E-17 109.5 9.2 105 57-171 47-164 (378)
229 1x19_A CRTF-related protein; m 99.4 7.6E-13 2.6E-17 107.8 9.8 107 56-171 189-295 (359)
230 2ip2_A Probable phenazine-spec 99.4 3.3E-13 1.1E-17 108.8 6.2 104 59-171 169-272 (334)
231 1tw3_A COMT, carminomycin 4-O- 99.4 4.7E-13 1.6E-17 109.0 6.8 107 56-171 182-288 (360)
232 3bzb_A Uncharacterized protein 99.4 3.1E-12 1.1E-16 101.0 11.2 109 56-171 78-205 (281)
233 2r3s_A Uncharacterized protein 99.4 2.6E-13 8.8E-18 109.3 4.9 108 56-171 164-271 (335)
234 3b3j_A Histone-arginine methyl 99.4 4.4E-13 1.5E-17 113.3 6.2 107 56-171 157-263 (480)
235 1zq9_A Probable dimethyladenos 99.4 1E-12 3.5E-17 104.0 8.0 91 42-143 16-106 (285)
236 3axs_A Probable N(2),N(2)-dime 99.4 1.2E-12 4E-17 107.8 8.4 104 57-171 52-158 (392)
237 2qy6_A UPF0209 protein YFCK; s 99.4 2.3E-12 7.9E-17 100.5 9.3 116 56-172 59-214 (257)
238 2ih2_A Modification methylase 99.4 3.2E-13 1.1E-17 112.1 4.5 119 56-189 38-182 (421)
239 2b9e_A NOL1/NOP2/SUN domain fa 99.4 5.1E-12 1.7E-16 101.1 10.8 116 56-176 101-239 (309)
240 3opn_A Putative hemolysin; str 99.3 1.8E-12 6E-17 99.8 7.6 117 36-171 18-137 (232)
241 1af7_A Chemotaxis receptor met 99.3 8.7E-13 3E-17 103.8 5.7 111 57-170 105-251 (274)
242 3lst_A CALO1 methyltransferase 99.3 9.1E-13 3.1E-17 107.0 6.0 104 56-171 183-286 (348)
243 1uwv_A 23S rRNA (uracil-5-)-me 99.3 1.2E-11 4E-16 103.4 12.9 102 56-171 285-389 (433)
244 2jjq_A Uncharacterized RNA met 99.3 3.8E-12 1.3E-16 106.0 9.4 99 56-171 289-387 (425)
245 4a6d_A Hydroxyindole O-methylt 99.3 6.2E-12 2.1E-16 102.4 9.4 106 56-171 178-283 (353)
246 3fut_A Dimethyladenosine trans 99.3 1.2E-11 4.2E-16 97.1 10.5 102 20-143 22-123 (271)
247 3reo_A (ISO)eugenol O-methyltr 99.3 2.7E-12 9.2E-17 105.1 6.3 99 56-171 202-300 (368)
248 3tqs_A Ribosomal RNA small sub 99.3 1.2E-11 4.2E-16 96.3 9.7 99 21-140 5-106 (255)
249 2zfu_A Nucleomethylin, cerebra 99.3 7.6E-12 2.6E-16 94.5 8.3 86 56-171 66-151 (215)
250 3gru_A Dimethyladenosine trans 99.3 9.2E-12 3.1E-16 98.9 8.9 88 43-142 39-126 (295)
251 1fp1_D Isoliquiritigenin 2'-O- 99.3 2.1E-12 7.1E-17 105.8 5.3 98 56-170 208-305 (372)
252 1fp2_A Isoflavone O-methyltran 99.3 3.4E-12 1.2E-16 103.7 6.1 99 56-171 187-288 (352)
253 3p9c_A Caffeic acid O-methyltr 99.3 4E-12 1.4E-16 103.9 6.5 99 56-171 200-298 (364)
254 2h1r_A Dimethyladenosine trans 99.3 5E-12 1.7E-16 100.7 6.7 102 20-142 17-118 (299)
255 2xyq_A Putative 2'-O-methyl tr 99.3 5.1E-12 1.8E-16 100.0 6.3 128 42-195 46-192 (290)
256 3ldg_A Putative uncharacterize 99.3 1.2E-11 4E-16 101.8 8.5 114 55-173 192-345 (384)
257 4azs_A Methyltransferase WBDD; 99.3 3.6E-12 1.2E-16 109.9 5.6 108 56-171 65-173 (569)
258 2ld4_A Anamorsin; methyltransf 99.2 9E-12 3.1E-16 91.3 6.2 88 55-170 10-100 (176)
259 3lcv_B Sisomicin-gentamicin re 99.2 2.5E-12 8.6E-17 99.5 3.0 105 56-170 131-235 (281)
260 3k0b_A Predicted N6-adenine-sp 99.2 7.1E-12 2.4E-16 103.4 5.9 114 55-173 199-352 (393)
261 3ldu_A Putative methylase; str 99.2 5.7E-12 1.9E-16 103.7 5.2 114 55-173 193-346 (385)
262 1yub_A Ermam, rRNA methyltrans 99.2 2.4E-13 8.1E-18 105.3 -3.6 116 43-171 18-145 (245)
263 1qam_A ERMC' methyltransferase 99.2 5.5E-11 1.9E-15 92.0 8.7 77 56-141 29-105 (244)
264 3cvo_A Methyltransferase-like 99.2 8.7E-11 3E-15 88.1 9.2 100 56-169 29-152 (202)
265 2okc_A Type I restriction enzy 99.2 1.1E-11 3.6E-16 104.0 4.7 114 56-173 170-309 (445)
266 4fzv_A Putative methyltransfer 99.2 1.8E-10 6.2E-15 93.7 11.5 134 55-188 146-303 (359)
267 1zg3_A Isoflavanone 4'-O-methy 99.2 2.5E-11 8.6E-16 98.8 5.9 98 57-171 193-293 (358)
268 3frh_A 16S rRNA methylase; met 99.2 2.3E-11 8E-16 93.2 5.0 102 56-170 104-205 (253)
269 3evf_A RNA-directed RNA polyme 99.2 7E-11 2.4E-15 91.9 7.3 146 39-197 59-208 (277)
270 1m6y_A S-adenosyl-methyltransf 99.2 1.3E-10 4.3E-15 92.6 9.0 89 43-139 15-107 (301)
271 2ar0_A M.ecoki, type I restric 99.2 4.4E-11 1.5E-15 102.5 6.8 117 56-174 168-315 (541)
272 3ll7_A Putative methyltransfer 99.1 3.7E-11 1.3E-15 99.2 5.1 82 57-142 93-175 (410)
273 3ftd_A Dimethyladenosine trans 99.1 4.4E-10 1.5E-14 87.2 10.8 86 44-142 21-107 (249)
274 2r6z_A UPF0341 protein in RSP 99.1 3.8E-11 1.3E-15 93.7 4.7 81 57-142 83-173 (258)
275 3s1s_A Restriction endonucleas 99.1 3.5E-10 1.2E-14 99.5 10.4 134 57-190 321-486 (878)
276 3khk_A Type I restriction-modi 99.1 2.5E-11 8.5E-16 103.9 2.1 131 56-189 243-415 (544)
277 2oyr_A UPF0341 protein YHIQ; a 99.1 9.1E-11 3.1E-15 91.4 4.3 83 59-143 90-177 (258)
278 3lkd_A Type I restriction-modi 99.1 3.4E-10 1.2E-14 96.8 8.0 131 57-189 221-377 (542)
279 3uzu_A Ribosomal RNA small sub 99.0 8.5E-10 2.9E-14 86.9 8.7 101 20-140 17-124 (279)
280 3gcz_A Polyprotein; flavivirus 99.0 1.6E-10 5.3E-15 90.0 4.3 144 39-197 75-225 (282)
281 3v97_A Ribosomal RNA large sub 99.0 5.6E-10 1.9E-14 98.3 7.1 116 55-173 188-349 (703)
282 1qyr_A KSGA, high level kasuga 98.9 2.2E-09 7.6E-14 83.3 8.3 89 43-142 10-102 (252)
283 3eld_A Methyltransferase; flav 98.9 2.5E-09 8.5E-14 83.8 7.7 145 39-197 66-215 (300)
284 2oo3_A Protein involved in cat 98.9 9.9E-09 3.4E-13 80.3 10.9 121 57-191 91-216 (283)
285 2wk1_A NOVP; transferase, O-me 98.9 9.6E-09 3.3E-13 80.9 9.8 107 56-170 105-243 (282)
286 3ua3_A Protein arginine N-meth 98.8 1.2E-08 4.1E-13 88.7 7.2 108 58-171 410-534 (745)
287 2px2_A Genome polyprotein [con 98.7 5.9E-08 2E-12 74.5 9.8 140 40-196 59-206 (269)
288 3vyw_A MNMC2; tRNA wobble urid 98.7 1.5E-07 5.2E-12 74.5 12.2 113 58-173 97-228 (308)
289 4gqb_A Protein arginine N-meth 98.7 4E-09 1.4E-13 91.3 2.4 104 59-170 359-466 (637)
290 3p8z_A Mtase, non-structural p 98.7 2.8E-07 9.5E-12 69.9 11.2 143 39-196 63-209 (267)
291 3lkz_A Non-structural protein 98.6 1.9E-07 6.5E-12 73.0 9.2 143 40-196 80-227 (321)
292 1wg8_A Predicted S-adenosylmet 98.6 5E-07 1.7E-11 70.7 10.1 83 44-139 12-98 (285)
293 3r24_A NSP16, 2'-O-methyl tran 98.4 6E-07 2.1E-11 70.2 7.8 131 41-196 91-237 (344)
294 3b5i_A S-adenosyl-L-methionine 98.4 6.6E-07 2.3E-11 73.1 6.9 117 56-172 51-226 (374)
295 3ufb_A Type I restriction-modi 98.3 4.6E-07 1.6E-11 77.4 5.0 114 56-173 216-364 (530)
296 4auk_A Ribosomal RNA large sub 98.3 1.9E-06 6.5E-11 69.9 8.0 70 56-139 210-279 (375)
297 2efj_A 3,7-dimethylxanthine me 98.3 1.8E-06 6.3E-11 70.6 7.7 110 58-173 53-227 (384)
298 3pvc_A TRNA 5-methylaminomethy 98.3 5.2E-06 1.8E-10 73.0 10.8 116 57-173 58-213 (689)
299 3ps9_A TRNA 5-methylaminomethy 98.3 5.7E-06 1.9E-10 72.6 11.0 114 59-173 68-221 (676)
300 3tka_A Ribosomal RNA small sub 98.3 3.6E-06 1.2E-10 67.3 8.6 75 56-138 56-136 (347)
301 1m6e_X S-adenosyl-L-methionnin 98.2 2.6E-06 8.9E-11 69.1 6.6 114 56-172 50-210 (359)
302 1i4w_A Mitochondrial replicati 98.1 4.4E-06 1.5E-10 67.7 5.8 88 20-123 27-117 (353)
303 2k4m_A TR8_protein, UPF0146 pr 97.9 5.1E-06 1.7E-10 58.6 2.3 39 56-95 34-73 (153)
304 2c7p_A Modification methylase 97.8 0.00032 1.1E-08 56.2 11.3 119 58-190 11-142 (327)
305 1g55_A DNA cytosine methyltran 97.7 0.00011 3.7E-09 59.4 8.5 121 58-190 2-138 (343)
306 2zig_A TTHA0409, putative modi 97.7 3.2E-05 1.1E-09 61.1 5.0 46 56-103 234-279 (297)
307 3g7u_A Cytosine-specific methy 97.5 0.00011 3.7E-09 60.1 5.6 119 59-190 3-140 (376)
308 3tos_A CALS11; methyltransfera 97.4 0.00098 3.4E-08 51.5 9.3 108 56-171 68-217 (257)
309 3s2e_A Zinc-containing alcohol 97.3 0.0013 4.3E-08 52.7 8.7 98 56-171 165-263 (340)
310 3ubt_Y Modification methylase 97.2 0.0035 1.2E-07 49.9 11.2 118 60-190 2-132 (331)
311 2zig_A TTHA0409, putative modi 97.2 0.00044 1.5E-08 54.5 5.7 63 111-173 20-99 (297)
312 1boo_A Protein (N-4 cytosine-s 97.2 0.0013 4.6E-08 52.5 8.1 65 110-174 12-87 (323)
313 1f8f_A Benzyl alcohol dehydrog 97.2 0.0016 5.5E-08 52.7 8.6 99 56-171 189-289 (371)
314 1g60_A Adenine-specific methyl 97.2 0.00049 1.7E-08 53.2 5.1 46 56-103 211-256 (260)
315 3me5_A Cytosine-specific methy 97.1 0.002 6.7E-08 54.3 8.7 124 58-190 88-249 (482)
316 4h0n_A DNMT2; SAH binding, tra 97.1 0.0031 1E-07 50.6 9.3 120 59-190 4-138 (333)
317 3qv2_A 5-cytosine DNA methyltr 97.1 0.003 1E-07 50.5 9.0 123 57-190 9-149 (327)
318 3iht_A S-adenosyl-L-methionine 97.1 0.00077 2.6E-08 47.7 4.7 113 46-169 29-145 (174)
319 1pl8_A Human sorbitol dehydrog 97.0 0.0033 1.1E-07 50.6 9.0 97 55-171 169-273 (356)
320 3m6i_A L-arabinitol 4-dehydrog 97.0 0.008 2.7E-07 48.4 11.3 99 55-171 177-283 (363)
321 2qrv_A DNA (cytosine-5)-methyl 97.0 0.0012 4E-08 52.2 6.0 76 56-140 14-93 (295)
322 1eg2_A Modification methylase 97.0 0.0019 6.4E-08 51.6 7.0 63 112-174 38-109 (319)
323 3fpc_A NADP-dependent alcohol 97.0 0.0026 9E-08 51.1 7.9 100 55-171 164-266 (352)
324 1g60_A Adenine-specific methyl 96.9 0.0016 5.5E-08 50.3 5.8 60 112-171 4-74 (260)
325 4ej6_A Putative zinc-binding d 96.8 0.004 1.4E-07 50.5 8.0 99 56-171 181-284 (370)
326 2vz8_A Fatty acid synthase; tr 96.8 8.6E-05 2.9E-09 73.5 -2.6 103 58-171 1241-1348(2512)
327 3jv7_A ADH-A; dehydrogenase, n 96.7 0.0052 1.8E-07 49.1 8.0 98 56-171 170-270 (345)
328 2dph_A Formaldehyde dismutase; 96.7 0.0042 1.4E-07 50.8 7.5 108 56-171 184-299 (398)
329 3uko_A Alcohol dehydrogenase c 96.7 0.0076 2.6E-07 48.9 8.9 99 56-171 192-295 (378)
330 4eez_A Alcohol dehydrogenase 1 96.6 0.011 3.9E-07 47.1 9.3 100 55-171 161-263 (348)
331 1boo_A Protein (N-4 cytosine-s 96.6 0.0011 3.6E-08 53.1 2.9 63 56-125 251-313 (323)
332 1e3j_A NADP(H)-dependent ketos 96.6 0.012 4.1E-07 47.2 9.2 98 56-171 167-271 (352)
333 1kol_A Formaldehyde dehydrogen 96.6 0.012 4.2E-07 48.0 9.3 108 56-171 184-300 (398)
334 1cdo_A Alcohol dehydrogenase; 96.6 0.016 5.4E-07 46.9 9.8 99 56-171 191-294 (374)
335 4b7c_A Probable oxidoreductase 96.5 0.0075 2.6E-07 48.0 7.6 99 55-171 147-248 (336)
336 1pqw_A Polyketide synthase; ro 96.5 0.0032 1.1E-07 46.2 4.9 97 56-171 37-137 (198)
337 1e3i_A Alcohol dehydrogenase, 96.5 0.018 6.2E-07 46.6 9.8 99 56-171 194-297 (376)
338 2jhf_A Alcohol dehydrogenase E 96.5 0.02 6.8E-07 46.3 9.8 99 56-171 190-293 (374)
339 1p0f_A NADP-dependent alcohol 96.5 0.016 5.5E-07 46.8 9.2 99 56-171 190-293 (373)
340 2fzw_A Alcohol dehydrogenase c 96.4 0.02 6.9E-07 46.2 9.2 99 56-171 189-292 (373)
341 1v3u_A Leukotriene B4 12- hydr 96.3 0.0097 3.3E-07 47.3 7.1 97 56-171 144-244 (333)
342 4a2c_A Galactitol-1-phosphate 96.3 0.036 1.2E-06 44.1 10.5 100 55-171 158-260 (346)
343 3gms_A Putative NADPH:quinone 96.3 0.0099 3.4E-07 47.5 6.9 98 55-171 142-243 (340)
344 1rjw_A ADH-HT, alcohol dehydro 96.2 0.0097 3.3E-07 47.5 6.4 98 56-171 163-261 (339)
345 2d8a_A PH0655, probable L-thre 96.2 0.011 3.9E-07 47.2 6.7 98 57-171 167-267 (348)
346 1vj0_A Alcohol dehydrogenase, 96.1 0.014 4.9E-07 47.3 7.2 96 56-171 194-298 (380)
347 1uuf_A YAHK, zinc-type alcohol 96.1 0.017 5.8E-07 46.7 7.5 95 56-171 193-288 (369)
348 2j3h_A NADP-dependent oxidored 96.1 0.018 6.1E-07 45.9 7.6 98 56-171 154-255 (345)
349 2b5w_A Glucose dehydrogenase; 96.1 0.018 6E-07 46.3 7.4 94 59-171 174-273 (357)
350 3ip1_A Alcohol dehydrogenase, 96.1 0.021 7.1E-07 46.8 7.9 100 56-171 212-318 (404)
351 3uog_A Alcohol dehydrogenase; 96.1 0.017 5.8E-07 46.5 7.3 97 56-171 188-287 (363)
352 2h6e_A ADH-4, D-arabinose 1-de 95.9 0.0099 3.4E-07 47.5 5.3 94 57-171 170-269 (344)
353 4dvj_A Putative zinc-dependent 95.9 0.026 8.7E-07 45.6 7.6 96 57-170 171-269 (363)
354 3swr_A DNA (cytosine-5)-methyl 95.8 0.19 6.3E-06 46.0 13.4 123 57-190 539-691 (1002)
355 2hcy_A Alcohol dehydrogenase 1 95.8 0.026 9E-07 45.1 7.2 98 56-171 168-269 (347)
356 3two_A Mannitol dehydrogenase; 95.7 0.015 5.2E-07 46.5 5.6 91 55-171 174-265 (348)
357 2c0c_A Zinc binding alcohol de 95.7 0.02 6.8E-07 46.2 6.3 97 56-171 162-261 (362)
358 1jvb_A NAD(H)-dependent alcoho 95.7 0.014 4.9E-07 46.7 5.4 98 56-171 169-271 (347)
359 3qwb_A Probable quinone oxidor 95.7 0.011 3.8E-07 47.0 4.6 97 56-171 147-247 (334)
360 3jyn_A Quinone oxidoreductase; 95.7 0.018 6.3E-07 45.5 5.9 97 56-171 139-239 (325)
361 4eye_A Probable oxidoreductase 95.7 0.033 1.1E-06 44.4 7.3 96 56-171 158-257 (342)
362 2dq4_A L-threonine 3-dehydroge 95.6 0.013 4.3E-07 46.9 4.8 97 57-171 164-262 (343)
363 1yb5_A Quinone oxidoreductase; 95.6 0.019 6.5E-07 46.1 5.6 97 56-171 169-269 (351)
364 2zb4_A Prostaglandin reductase 95.6 0.029 9.8E-07 45.0 6.7 99 56-171 157-260 (357)
365 2eih_A Alcohol dehydrogenase; 95.4 0.02 7E-07 45.7 5.3 97 56-171 165-265 (343)
366 4dup_A Quinone oxidoreductase; 95.3 0.036 1.2E-06 44.4 6.4 97 56-171 166-265 (353)
367 1pjc_A Protein (L-alanine dehy 95.3 0.15 5.2E-06 41.1 10.1 101 57-171 166-267 (361)
368 1yqd_A Sinapyl alcohol dehydro 95.2 0.15 5.1E-06 41.0 10.0 95 57-171 187-282 (366)
369 1rjd_A PPM1P, carboxy methyl t 95.2 0.071 2.4E-06 42.7 7.7 109 57-169 97-230 (334)
370 3gaz_A Alcohol dehydrogenase s 95.1 0.084 2.9E-06 42.1 8.1 94 56-171 149-246 (343)
371 3p2y_A Alanine dehydrogenase/p 95.1 0.11 3.8E-06 42.3 8.7 108 57-170 183-301 (381)
372 2py6_A Methyltransferase FKBM; 95.1 0.026 8.9E-07 46.4 5.1 48 56-103 225-274 (409)
373 3av4_A DNA (cytosine-5)-methyl 95.0 0.49 1.7E-05 44.5 13.8 122 58-190 851-1002(1330)
374 3fwz_A Inner membrane protein 95.0 0.23 7.8E-06 34.0 9.0 96 58-173 7-107 (140)
375 2cf5_A Atccad5, CAD, cinnamyl 95.0 0.11 3.9E-06 41.6 8.4 95 57-171 180-275 (357)
376 3gqv_A Enoyl reductase; medium 94.9 0.11 3.7E-06 41.9 8.3 97 56-171 163-263 (371)
377 3goh_A Alcohol dehydrogenase, 94.9 0.039 1.3E-06 43.4 5.5 89 55-171 140-229 (315)
378 1wly_A CAAR, 2-haloacrylate re 94.9 0.037 1.3E-06 43.9 5.4 97 56-171 144-244 (333)
379 3fbg_A Putative arginate lyase 94.9 0.076 2.6E-06 42.4 7.3 96 57-171 150-248 (346)
380 2j8z_A Quinone oxidoreductase; 94.9 0.054 1.9E-06 43.4 6.4 97 56-171 161-261 (354)
381 1qor_A Quinone oxidoreductase; 94.8 0.027 9.1E-07 44.6 4.4 97 56-171 139-239 (327)
382 2y0c_A BCEC, UDP-glucose dehyd 94.8 0.6 2E-05 39.1 12.6 108 57-171 7-128 (478)
383 1piw_A Hypothetical zinc-type 94.7 0.018 6.3E-07 46.3 3.2 97 56-171 178-276 (360)
384 2hwk_A Helicase NSP2; rossman 94.7 0.021 7.1E-07 44.5 3.2 67 128-196 204-277 (320)
385 1eg2_A Modification methylase 94.7 0.029 1E-06 44.6 4.2 46 56-103 241-289 (319)
386 4a0s_A Octenoyl-COA reductase/ 94.6 0.097 3.3E-06 43.3 7.4 97 56-171 219-336 (447)
387 2uyo_A Hypothetical protein ML 94.6 0.16 5.6E-06 40.1 8.2 113 57-174 102-221 (310)
388 1iz0_A Quinone oxidoreductase; 94.2 0.083 2.8E-06 41.2 5.9 93 55-171 123-218 (302)
389 1x13_A NAD(P) transhydrogenase 93.9 0.46 1.6E-05 38.9 10.0 42 57-99 171-213 (401)
390 3gg2_A Sugar dehydrogenase, UD 93.9 0.79 2.7E-05 38.1 11.5 106 59-171 3-122 (450)
391 2vhw_A Alanine dehydrogenase; 93.8 0.51 1.7E-05 38.2 10.0 98 57-171 167-268 (377)
392 4dio_A NAD(P) transhydrogenase 93.8 0.33 1.1E-05 39.8 8.7 109 57-171 189-312 (405)
393 4a27_A Synaptic vesicle membra 93.7 0.16 5.3E-06 40.6 6.7 95 56-171 141-238 (349)
394 1l7d_A Nicotinamide nucleotide 93.7 0.4 1.4E-05 38.9 9.1 109 57-171 171-294 (384)
395 2cdc_A Glucose dehydrogenase g 93.6 0.061 2.1E-06 43.3 4.1 93 58-171 181-278 (366)
396 3krt_A Crotonyl COA reductase; 93.5 0.11 3.7E-06 43.2 5.6 104 56-171 227-344 (456)
397 4dkj_A Cytosine-specific methy 93.5 0.21 7E-06 41.0 7.1 45 59-103 11-60 (403)
398 4ft4_B DNA (cytosine-5)-methyl 93.4 0.1 3.5E-06 46.4 5.6 57 58-123 212-273 (784)
399 3nx4_A Putative oxidoreductase 93.4 0.094 3.2E-06 41.3 4.8 90 60-171 149-241 (324)
400 3trk_A Nonstructural polyprote 93.4 0.044 1.5E-06 42.2 2.7 70 125-196 206-282 (324)
401 3ggo_A Prephenate dehydrogenas 93.2 0.79 2.7E-05 36.1 9.9 91 58-169 33-126 (314)
402 3c85_A Putative glutathione-re 93.1 0.68 2.3E-05 33.0 8.7 96 58-173 39-141 (183)
403 2eez_A Alanine dehydrogenase; 93.1 0.66 2.3E-05 37.4 9.5 99 57-171 165-266 (369)
404 4dcm_A Ribosomal RNA large sub 93.1 0.56 1.9E-05 37.9 9.0 118 57-194 38-155 (375)
405 2vn8_A Reticulon-4-interacting 93.1 0.23 7.8E-06 40.0 6.7 97 56-171 182-280 (375)
406 3k96_A Glycerol-3-phosphate de 93.0 0.76 2.6E-05 36.9 9.7 100 58-171 29-133 (356)
407 4a7p_A UDP-glucose dehydrogena 93.0 0.99 3.4E-05 37.5 10.6 107 58-171 8-129 (446)
408 1xa0_A Putative NADPH dependen 92.9 0.067 2.3E-06 42.3 3.2 92 60-171 152-246 (328)
409 1lss_A TRK system potassium up 92.6 0.95 3.3E-05 30.2 8.5 96 58-173 4-104 (140)
410 3l9w_A Glutathione-regulated p 92.5 0.61 2.1E-05 38.3 8.6 97 58-173 4-104 (413)
411 3h7a_A Short chain dehydrogena 92.5 1.5 5.3E-05 32.9 10.5 75 57-140 6-93 (252)
412 3imf_A Short chain dehydrogena 91.9 2.2 7.4E-05 32.1 10.6 77 57-139 5-92 (257)
413 1id1_A Putative potassium chan 91.8 1.2 4.2E-05 30.7 8.5 98 59-173 4-107 (153)
414 3oig_A Enoyl-[acyl-carrier-pro 91.7 3.3 0.00011 31.1 12.6 109 57-171 6-147 (266)
415 3tqh_A Quinone oxidoreductase; 91.6 0.61 2.1E-05 36.6 7.4 94 55-171 150-245 (321)
416 2g1u_A Hypothetical protein TM 91.5 0.76 2.6E-05 31.9 7.1 101 56-174 17-121 (155)
417 1mv8_A GMD, GDP-mannose 6-dehy 91.5 4.4 0.00015 33.3 12.7 103 60-169 2-121 (436)
418 3sju_A Keto reductase; short-c 91.4 2.9 9.8E-05 31.9 11.0 78 57-140 23-111 (279)
419 3pxx_A Carveol dehydrogenase; 91.4 3.7 0.00013 31.1 12.1 106 57-171 9-153 (287)
420 3l4b_C TRKA K+ channel protien 91.2 1.5 5E-05 32.2 8.8 95 60-173 2-101 (218)
421 3o38_A Short chain dehydrogena 91.2 2.6 8.8E-05 31.7 10.4 78 57-140 21-111 (266)
422 3grk_A Enoyl-(acyl-carrier-pro 91.1 4.2 0.00014 31.3 11.8 107 57-171 30-169 (293)
423 3is3_A 17BETA-hydroxysteroid d 90.9 4 0.00014 30.9 11.3 109 57-171 17-152 (270)
424 3ijr_A Oxidoreductase, short c 90.9 4 0.00014 31.3 11.4 109 57-171 46-182 (291)
425 3lyl_A 3-oxoacyl-(acyl-carrier 90.9 3.3 0.00011 30.7 10.6 76 57-140 4-92 (247)
426 3tjr_A Short chain dehydrogena 90.8 2.7 9.1E-05 32.5 10.4 76 57-140 30-118 (301)
427 1pzg_A LDH, lactate dehydrogen 90.8 1.8 6E-05 34.4 9.4 112 56-173 7-134 (331)
428 4fn4_A Short chain dehydrogena 90.7 3.2 0.00011 31.6 10.4 77 57-139 6-93 (254)
429 2o3j_A UDP-glucose 6-dehydroge 90.7 3.9 0.00013 34.1 11.8 108 59-171 10-135 (481)
430 2km1_A Protein DRE2; yeast, an 90.5 0.27 9.2E-06 33.9 3.7 74 90-169 21-96 (136)
431 3llv_A Exopolyphosphatase-rela 90.5 0.95 3.3E-05 30.6 6.7 93 59-173 7-105 (141)
432 3pid_A UDP-glucose 6-dehydroge 90.4 1.7 5.7E-05 36.0 9.1 106 59-171 37-153 (432)
433 1zkd_A DUF185; NESG, RPR58, st 90.3 0.37 1.3E-05 39.3 5.0 48 55-102 78-132 (387)
434 4g81_D Putative hexonate dehyd 90.2 1.7 5.8E-05 33.2 8.4 78 57-140 8-96 (255)
435 2i6t_A Ubiquitin-conjugating e 90.2 1.7 5.7E-05 34.1 8.6 114 58-187 14-137 (303)
436 1dlj_A UDP-glucose dehydrogena 90.1 2.6 8.8E-05 34.3 10.0 103 60-171 2-117 (402)
437 1wma_A Carbonyl reductase [NAD 90.1 2.9 9.9E-05 31.3 9.8 109 57-171 3-138 (276)
438 3r1i_A Short-chain type dehydr 90.0 2.6 9E-05 32.2 9.5 76 57-140 31-119 (276)
439 1ldn_A L-lactate dehydrogenase 90.0 4.5 0.00015 31.7 11.0 108 57-172 5-124 (316)
440 3d0o_A L-LDH 1, L-lactate dehy 89.9 1.8 6.2E-05 34.0 8.7 105 57-172 5-124 (317)
441 3dqp_A Oxidoreductase YLBE; al 89.9 3.9 0.00013 29.6 10.1 67 60-140 2-73 (219)
442 2dpo_A L-gulonate 3-dehydrogen 89.8 0.79 2.7E-05 36.3 6.5 101 59-171 7-123 (319)
443 3pi7_A NADH oxidoreductase; gr 89.7 0.44 1.5E-05 37.9 5.0 94 59-171 166-263 (349)
444 4g65_A TRK system potassium up 89.7 1.3 4.4E-05 36.9 8.0 69 57-137 2-75 (461)
445 4e12_A Diketoreductase; oxidor 89.7 1.4 4.6E-05 34.0 7.7 101 59-171 5-121 (283)
446 3rih_A Short chain dehydrogena 89.6 2.8 9.6E-05 32.4 9.5 79 57-140 40-129 (293)
447 3h2s_A Putative NADH-flavin re 89.4 4.5 0.00015 29.2 10.1 100 60-171 2-104 (224)
448 3dfz_A SIRC, precorrin-2 dehyd 89.3 1.9 6.4E-05 32.3 7.9 78 45-138 18-99 (223)
449 3ucx_A Short chain dehydrogena 89.3 5.6 0.00019 29.9 11.2 75 57-139 10-97 (264)
450 1ae1_A Tropinone reductase-I; 89.3 4.1 0.00014 30.9 10.1 78 57-140 20-109 (273)
451 1tt7_A YHFP; alcohol dehydroge 89.2 0.091 3.1E-06 41.5 0.6 88 60-171 153-247 (330)
452 3pgx_A Carveol dehydrogenase; 89.1 6 0.00021 30.0 11.1 78 57-140 14-115 (280)
453 1yb1_A 17-beta-hydroxysteroid 89.1 5.9 0.0002 29.9 11.0 78 57-140 30-118 (272)
454 3v2g_A 3-oxoacyl-[acyl-carrier 89.1 6 0.00021 30.0 11.7 109 57-171 30-165 (271)
455 4gua_A Non-structural polyprot 89.1 0.39 1.3E-05 40.9 4.3 67 128-196 219-292 (670)
456 3oj0_A Glutr, glutamyl-tRNA re 89.0 3.9 0.00013 27.7 10.8 85 58-170 21-109 (144)
457 1guz_A Malate dehydrogenase; o 89.0 4.3 0.00015 31.7 10.2 106 60-172 2-119 (310)
458 3ged_A Short-chain dehydrogena 88.9 6.1 0.00021 29.9 11.2 69 59-139 3-84 (247)
459 3ioy_A Short-chain dehydrogena 88.9 5.3 0.00018 31.1 10.7 80 57-140 7-97 (319)
460 3rkr_A Short chain oxidoreduct 88.9 3.3 0.00011 31.1 9.3 78 57-140 28-116 (262)
461 3tfo_A Putative 3-oxoacyl-(acy 88.9 3.4 0.00012 31.4 9.3 77 58-140 4-91 (264)
462 3r3s_A Oxidoreductase; structu 88.9 5.2 0.00018 30.7 10.6 109 57-171 48-185 (294)
463 2ae2_A Protein (tropinone redu 88.8 4.1 0.00014 30.6 9.7 78 57-140 8-97 (260)
464 3pk0_A Short-chain dehydrogena 88.7 4.8 0.00017 30.3 10.1 78 57-139 9-97 (262)
465 1bg6_A N-(1-D-carboxylethyl)-L 88.4 1.8 6.2E-05 34.1 7.8 99 59-170 5-108 (359)
466 3qiv_A Short-chain dehydrogena 88.4 3.3 0.00011 30.8 8.9 78 57-140 8-96 (253)
467 3hwr_A 2-dehydropantoate 2-red 88.3 0.85 2.9E-05 35.8 5.7 99 57-171 18-120 (318)
468 1h2b_A Alcohol dehydrogenase; 88.3 2.1 7.2E-05 34.1 8.1 95 56-171 185-285 (359)
469 1y6j_A L-lactate dehydrogenase 88.3 2.3 8E-05 33.5 8.2 107 57-172 6-124 (318)
470 3ic5_A Putative saccharopine d 88.1 3.4 0.00012 26.4 7.8 69 58-139 5-78 (118)
471 4ibo_A Gluconate dehydrogenase 88.0 2.7 9.1E-05 32.0 8.3 78 57-140 25-113 (271)
472 1zcj_A Peroxisomal bifunctiona 88.0 4.3 0.00015 33.7 10.1 100 59-171 38-150 (463)
473 1t2d_A LDH-P, L-lactate dehydr 88.0 3.9 0.00013 32.2 9.4 108 58-173 4-128 (322)
474 3abi_A Putative uncharacterize 88.0 2.2 7.4E-05 34.2 8.0 69 57-139 15-86 (365)
475 2aef_A Calcium-gated potassium 87.9 5.8 0.0002 29.2 10.0 95 58-174 9-108 (234)
476 2c07_A 3-oxoacyl-(acyl-carrier 87.8 7.2 0.00025 29.6 10.7 77 58-140 44-131 (285)
477 4imr_A 3-oxoacyl-(acyl-carrier 87.8 3.3 0.00011 31.5 8.7 78 57-140 32-119 (275)
478 3cea_A MYO-inositol 2-dehydrog 87.8 8.5 0.00029 30.1 11.9 71 57-139 7-80 (346)
479 3v8b_A Putative dehydrogenase, 87.8 7.7 0.00026 29.6 11.8 78 57-140 27-115 (283)
480 3ce6_A Adenosylhomocysteinase; 87.6 3.5 0.00012 34.7 9.2 89 56-171 272-361 (494)
481 2q3e_A UDP-glucose 6-dehydroge 87.6 9 0.00031 31.7 11.8 107 59-170 6-130 (467)
482 3uve_A Carveol dehydrogenase ( 87.6 7.7 0.00026 29.5 11.2 76 57-140 10-114 (286)
483 3tsc_A Putative oxidoreductase 87.6 7.2 0.00025 29.5 10.6 76 57-140 10-111 (277)
484 1gu7_A Enoyl-[acyl-carrier-pro 87.6 1.3 4.4E-05 35.3 6.4 97 56-171 165-275 (364)
485 3u5t_A 3-oxoacyl-[acyl-carrier 87.5 4.3 0.00015 30.7 9.2 109 57-171 26-161 (267)
486 2gcg_A Glyoxylate reductase/hy 87.4 8.1 0.00028 30.4 11.0 91 57-173 154-247 (330)
487 3o26_A Salutaridine reductase; 87.4 1.4 4.8E-05 33.8 6.4 79 57-140 11-101 (311)
488 3gaf_A 7-alpha-hydroxysteroid 87.3 4.7 0.00016 30.2 9.2 78 57-140 11-99 (256)
489 4fgs_A Probable dehydrogenase 87.3 8.4 0.00029 29.6 11.5 106 57-171 28-159 (273)
490 4eso_A Putative oxidoreductase 87.2 7.7 0.00026 29.0 11.0 106 57-171 7-138 (255)
491 3svt_A Short-chain type dehydr 87.2 8.1 0.00028 29.3 10.7 81 57-140 10-101 (281)
492 4iin_A 3-ketoacyl-acyl carrier 87.1 5.5 0.00019 30.1 9.5 78 57-140 28-117 (271)
493 1smk_A Malate dehydrogenase, g 87.0 7.3 0.00025 30.7 10.5 106 57-172 7-126 (326)
494 3awd_A GOX2181, putative polyo 87.0 6.7 0.00023 29.1 9.9 77 57-139 12-99 (260)
495 3f1l_A Uncharacterized oxidore 87.0 7.8 0.00027 28.9 10.3 79 57-140 11-102 (252)
496 3cxt_A Dehydrogenase with diff 87.0 8.8 0.0003 29.4 11.0 77 57-139 33-120 (291)
497 2vz8_A Fatty acid synthase; tr 87.0 2.1 7.3E-05 43.0 8.7 99 56-170 1666-1769(2512)
498 3ius_A Uncharacterized conserv 86.9 3.3 0.00011 31.3 8.2 95 59-171 6-102 (286)
499 4fs3_A Enoyl-[acyl-carrier-pro 86.7 8.4 0.00029 28.9 11.1 77 57-139 5-95 (256)
500 3t7c_A Carveol dehydrogenase; 86.6 8.7 0.0003 29.5 10.6 77 57-139 27-126 (299)
No 1
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=100.00 E-value=1.4e-35 Score=234.52 Aligned_cols=193 Identities=38% Similarity=0.719 Sum_probs=176.6
Q ss_pred eeeeeeeceeecCCCC--------CCCCCcEEEEcCeeeeeccchhhHHHHHHhhcccCCCCCCeEEEEeCCchHhHHHH
Q psy4592 4 SLSLQVEEPFYPSSSN--------RKEFGTALILDGIIQCTEFDEFSYSEMIAFLPLCSHPNPKKVLIVGGGDGGVAREV 75 (197)
Q Consensus 4 ~~~~~~~~~~~~~~~~--------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l 75 (197)
..+++++++|++++|+ +..||+.|++||.+|++.++++.|++++.+++++.+++|++||.||.|.|+.++++
T Consensus 22 ~~~~~v~~vl~~~~S~yQ~i~v~~s~~~G~~L~LDg~~q~te~De~~YhE~l~h~~l~~~p~pk~VLIiGgGdG~~~rev 101 (294)
T 3o4f_A 22 GQYFAVDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREV 101 (294)
T ss_dssp EEEEEESEEEEEEC---CCEEEEEETTTEEEEEETTEEEEETTTHHHHHHHHHHHHHHHSSCCCEEEEESCTTSHHHHHH
T ss_pred ceEEEEeeEEEeccCCCceEEEEEcCCcceEEEECCchhhccccHHHHHHHHHHHHHhhCCCCCeEEEECCCchHHHHHH
Confidence 3568899999999998 77899999999999999999999999999999988999999999999999999999
Q ss_pred hcCCCCccEEEEEcCHHHHHHHHhhcCCCC-CCCCCCCeEEEEcchHHHHhhcCCceeEEEECCCCCCCCCcccccHHHH
Q psy4592 76 LKHPSVESAYLVEIDNRVIEVSKKYLPGMA-VGLSDPRLTVHVGDGFRFMSEHQQEFDVIITDSSDPVGPAESLFQASYF 154 (197)
Q Consensus 76 ~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~~~~~~~~~~~~~l~~~~~~ 154 (197)
++..+..+++.|||||.+++.++++++.+. +.+++++++++.+|+.+++....++||+|++|.+.+..+...|++.+|+
T Consensus 102 lk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvIi~D~~dp~~~~~~L~t~eFy 181 (294)
T 3o4f_A 102 TRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIISDCTDPIGPGESLFTSAFY 181 (294)
T ss_dssp HTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEEEESCCCCCCTTCCSSCCHHH
T ss_pred HHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEEEEeCCCcCCCchhhcCHHHH
Confidence 998777899999999999999999986542 2246789999999999999887889999999999999888899999999
Q ss_pred HHHHhhcCCCcEEEEEcCCCCcChhHHHHHHHHHHhhCCccc
Q psy4592 155 ELMSRALRPGGIVCSQAGTLWYSLDCVGNTLQHCASVFPRLH 196 (197)
Q Consensus 155 ~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~f~~v~ 196 (197)
+.++++|+|||+++.++.+++...+.+..+++.++++||.|+
T Consensus 182 ~~~~~~L~p~Gv~v~q~~sp~~~~~~~~~~~~~l~~~F~~v~ 223 (294)
T 3o4f_A 182 EGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHYFSDVG 223 (294)
T ss_dssp HHHHHTEEEEEEEEEEEEESSSCCHHHHHHHHHHHHHCSEEE
T ss_pred HHHHHHhCCCCEEEEecCCcccChHHHHHHHHHHHhhCCcee
Confidence 999999999999999999999988999999999999999885
No 2
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=100.00 E-value=7.8e-34 Score=226.55 Aligned_cols=195 Identities=38% Similarity=0.710 Sum_probs=160.9
Q ss_pred cceeeeeeeceeecCCCC--------CCCCCcEEEEcCeeeeeccchhhHHHHHHhhcccCCCCCCeEEEEeCCchHhHH
Q psy4592 2 GVSLSLQVEEPFYPSSSN--------RKEFGTALILDGIIQCTEFDEFSYSEMIAFLPLCSHPNPKKVLIVGGGDGGVAR 73 (197)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~--------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~ 73 (197)
|+..+++++++|++++|+ +..||+.|++||.++++.++++.|++++.+++++.++++++|||||||+|.++.
T Consensus 20 ~~~~~~~~~~~l~~~~s~~q~i~v~~~~~~g~~L~ldg~~~~~~~de~~Y~e~l~~~~l~~~~~~~~VLdiG~G~G~~~~ 99 (294)
T 3adn_A 20 QFGQYFAVDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLR 99 (294)
T ss_dssp SEEEEECCSCEEEEC----CCCEEECCTTTCCEEEETTEEEEETTTHHHHHHHHHHHHHHHSTTCCEEEEESCTTCHHHH
T ss_pred CceEEEEcccEEEEeECCCceEEEEEcCCcceEEEECCeEeeccCchhHHHHHHHHHHHhcCCCCCEEEEEeCChhHHHH
Confidence 677899999999999999 567999999999999999999999999999887777888999999999999999
Q ss_pred HHhcCCCCccEEEEEcCHHHHHHHHhhcCCCC-CCCCCCCeEEEEcchHHHHhhcCCceeEEEECCCCCCCCCcccccHH
Q psy4592 74 EVLKHPSVESAYLVEIDNRVIEVSKKYLPGMA-VGLSDPRLTVHVGDGFRFMSEHQQEFDVIITDSSDPVGPAESLFQAS 152 (197)
Q Consensus 74 ~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~~~~~~~~~~~~~l~~~~ 152 (197)
++++..+..++++||+|+++++.|+++++.++ +.++.++++++++|+.+++....++||+|++|++.+..+...+++.+
T Consensus 100 ~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvIi~D~~~p~~~~~~l~~~~ 179 (294)
T 3adn_A 100 EVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIISDCTDPIGPGESLFTSA 179 (294)
T ss_dssp HHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEEEECC----------CCHH
T ss_pred HHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEEEECCCCccCcchhccHHH
Confidence 99988666899999999999999999986431 11345799999999998887666799999999998888777888899
Q ss_pred HHHHHHhhcCCCcEEEEEcCCCCcChhHHHHHHHHHHhhCCccc
Q psy4592 153 YFELMSRALRPGGIVCSQAGTLWYSLDCVGNTLQHCASVFPRLH 196 (197)
Q Consensus 153 ~~~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~f~~v~ 196 (197)
+++.++++|+|||++++++.+++...+.+..+.+.+++.|+.++
T Consensus 180 f~~~~~~~LkpgG~lv~~~~s~~~~~~~~~~~~~~l~~~F~~v~ 223 (294)
T 3adn_A 180 FYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHYFSDVG 223 (294)
T ss_dssp HHHHHHHTEEEEEEEEEEEEECSSCCHHHHHHHHHHHHHCSEEE
T ss_pred HHHHHHHhcCCCCEEEEecCCcccchHHHHHHHHHHHHHCCCeE
Confidence 99999999999999999998888888899999999999999875
No 3
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=100.00 E-value=1.9e-32 Score=216.83 Aligned_cols=195 Identities=43% Similarity=0.836 Sum_probs=170.9
Q ss_pred cceeeeeeeceeecCCCC--------CCCCCcEEEEcCeeeeeccchhhHHHHHHhhcccCCCCCCeEEEEeCCchHhHH
Q psy4592 2 GVSLSLQVEEPFYPSSSN--------RKEFGTALILDGIIQCTEFDEFSYSEMIAFLPLCSHPNPKKVLIVGGGDGGVAR 73 (197)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~--------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~ 73 (197)
|...+++++++|++++|+ +..+|+.+++||..|+...+++.|++++.+++++.++++++|||||||+|.++.
T Consensus 12 ~~~~~~~~~~~l~~~~s~~~~i~v~~~~~~g~~L~ldg~~q~~~~de~~y~e~l~~~~l~~~~~~~~VLdiG~G~G~~~~ 91 (275)
T 1iy9_A 12 NFGITMKVNKTLHTEQTEFQHLEMVETEEFGNMLFLDGMVMTSEKDEFVYHEMVAHVPLFTHPNPEHVLVVGGGDGGVIR 91 (275)
T ss_dssp TEEEEEEEEEEEEEEECSSCEEEEEEETTTEEEEEETTEEEEETTTHHHHHHHHHHHHHHHSSSCCEEEEESCTTCHHHH
T ss_pred CcEEEEeeeeEEEEEECCCceEEEEEcCCCCEEEEECCEEeecccchhHHHHHHHHHHHhhCCCCCEEEEECCchHHHHH
Confidence 567899999999999998 556889999999999998999999999998876656778999999999999999
Q ss_pred HHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEEECCCCCCCCCcccccHHH
Q psy4592 74 EVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVIITDSSDPVGPAESLFQASY 153 (197)
Q Consensus 74 ~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~~~~~~~~~~~~~l~~~~~ 153 (197)
++++..+..++++||+|+.+++.|+++++.+.+++..++++++++|+.++++...++||+|++|++.+..+...+++.++
T Consensus 92 ~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii~d~~~~~~~~~~l~~~~~ 171 (275)
T 1iy9_A 92 EILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIMVDSTEPVGPAVNLFTKGF 171 (275)
T ss_dssp HHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEEESCSSCCSCCCCCSTTHH
T ss_pred HHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEEECCCCCCCcchhhhHHHH
Confidence 99987666899999999999999999885322223457999999999998876567899999999987777777888999
Q ss_pred HHHHHhhcCCCcEEEEEcCCCCcChhHHHHHHHHHHhhCCccc
Q psy4592 154 FELMSRALRPGGIVCSQAGTLWYSLDCVGNTLQHCASVFPRLH 196 (197)
Q Consensus 154 ~~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~f~~v~ 196 (197)
++.++++|+|||+++++..+++...+.++.+.+.++++|++|+
T Consensus 172 ~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~ 214 (275)
T 1iy9_A 172 YAGIAKALKEDGIFVAQTDNPWFTPELITNVQRDVKEIFPITK 214 (275)
T ss_dssp HHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHhcCCCcEEEEEcCCccccHHHHHHHHHHHHHhCCCeE
Confidence 9999999999999999988888888899999999999999875
No 4
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=100.00 E-value=2.8e-31 Score=210.97 Aligned_cols=195 Identities=41% Similarity=0.763 Sum_probs=171.9
Q ss_pred cceeeeeeeceeecCCCC--------CCCCCcEEEEcCeeeeeccchhhHHHHHHhhcccCCCCCCeEEEEeCCchHhHH
Q psy4592 2 GVSLSLQVEEPFYPSSSN--------RKEFGTALILDGIIQCTEFDEFSYSEMIAFLPLCSHPNPKKVLIVGGGDGGVAR 73 (197)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~--------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~ 73 (197)
|+..++.++++|++++|+ +..+|+.+++||..|+...+++.|++++.+++++.++++++|||||||+|.++.
T Consensus 15 ~~~~~~~~~~~l~~~~s~~q~i~v~~~~~~g~~l~ldg~~q~~~~~e~~Y~e~l~~~~l~~~~~~~~VLdiG~G~G~~~~ 94 (283)
T 2i7c_A 15 GQAFSLKIKKILYETKSKYQNVLVFESTTYGKVLVLDGVIQLTEKDEFAYHEMMTHVPMTVSKEPKNVLVVGGGDGGIIR 94 (283)
T ss_dssp TCCEEEEEEEEEEEEECSSSEEEEEEESSSCEEEEETTEEEEETTTHHHHHHHHHHHHHTTSSSCCEEEEEECTTSHHHH
T ss_pred CceEEEecccEEEEEECCCccEEEEEcCCCCEEEEECCEeeecccchhhHHHHHHHHHHhcCCCCCeEEEEeCCcCHHHH
Confidence 567889999999999998 556899999999999999999999999998887767788999999999999999
Q ss_pred HHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEEECCCCCCCCCcccccHHH
Q psy4592 74 EVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVIITDSSDPVGPAESLFQASY 153 (197)
Q Consensus 74 ~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~~~~~~~~~~~~~l~~~~~ 153 (197)
++++..+..+++++|+|+.+++.|+++++.++.+++.++++++++|+.++++...++||+|++|.+.+..+...+++.++
T Consensus 95 ~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~d~~~~~~~~~~l~~~~~ 174 (283)
T 2i7c_A 95 ELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIVDSSDPIGPAETLFNQNF 174 (283)
T ss_dssp HHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEEECCCTTTGGGGGSSHHH
T ss_pred HHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEEEcCCCCCCcchhhhHHHH
Confidence 99987666899999999999999999987542223357899999999998776567899999999888777777888999
Q ss_pred HHHHHhhcCCCcEEEEEcCCCCcChhHHHHHHHHHHhhCCccc
Q psy4592 154 FELMSRALRPGGIVCSQAGTLWYSLDCVGNTLQHCASVFPRLH 196 (197)
Q Consensus 154 ~~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~f~~v~ 196 (197)
++.++++|+|||+++++..+++...+....+.+.+++.|++++
T Consensus 175 l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~ 217 (283)
T 2i7c_A 175 YEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKKLFKKVE 217 (283)
T ss_dssp HHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHhcCCCcEEEEECCCcccCHHHHHHHHHHHHHHCCceE
Confidence 9999999999999999998888888889999999999999875
No 5
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.97 E-value=3.9e-31 Score=211.98 Aligned_cols=195 Identities=62% Similarity=1.046 Sum_probs=161.1
Q ss_pred cceeeeeeeceeecCCCC--------CCCCCcEEEEcCeeeeeccchhhHHHHHHhhcccCCCCCCeEEEEeCCchHhHH
Q psy4592 2 GVSLSLQVEEPFYPSSSN--------RKEFGTALILDGIIQCTEFDEFSYSEMIAFLPLCSHPNPKKVLIVGGGDGGVAR 73 (197)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~--------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~ 73 (197)
|+..+++++++|++++|+ +..+|+.|++||..++..++++.|++++.+++++.++++++|||||||+|.++.
T Consensus 32 ~~~~~~~~~~~l~~~~s~~q~i~v~~~~~~g~~L~ldg~~~~~~~de~~y~e~l~~~~l~~~~~~~~VLdiG~G~G~~~~ 111 (304)
T 2o07_A 32 GQALSLQVEQLLHHRRSRYQDILVFRSKTYGNVLVLDGVIQCTERDEFSYQEMIANLPLCSHPNPRKVLIIGGGDGGVLR 111 (304)
T ss_dssp TEEEEEEEEEEEEEEECSSSEEEEEEESSSCEEEEETTEEEEETTTHHHHHHHHHHHHHTTSSSCCEEEEEECTTSHHHH
T ss_pred CceEEEEeccEEEEEECCCcEEEEEEcCCCceEEEECCEEEeecccchHHHHHHHHHHHhhCCCCCEEEEECCCchHHHH
Confidence 667899999999999999 556899999999999998999999999998876666778999999999999999
Q ss_pred HHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEEECCCCCCCCCcccccHHH
Q psy4592 74 EVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVIITDSSDPVGPAESLFQASY 153 (197)
Q Consensus 74 ~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~~~~~~~~~~~~~l~~~~~ 153 (197)
++++..+..++++||+|+.+++.|+++++.+..+++.++++++++|+.++++...++||+|++|.+.+..+...+.+.++
T Consensus 112 ~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii~d~~~~~~~~~~l~~~~~ 191 (304)
T 2o07_A 112 EVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVIITDSSDPMGPAESLFKESY 191 (304)
T ss_dssp HHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEEEECC-----------CHH
T ss_pred HHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEEECCCCCCCcchhhhHHHH
Confidence 99988666899999999999999999875421122357899999999998776567899999999877766555666889
Q ss_pred HHHHHhhcCCCcEEEEEcCCCCcChhHHHHHHHHHHhhCCccc
Q psy4592 154 FELMSRALRPGGIVCSQAGTLWYSLDCVGNTLQHCASVFPRLH 196 (197)
Q Consensus 154 ~~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~f~~v~ 196 (197)
+++++++|+|||+++++..++|...+..+.+.+.+++.|++++
T Consensus 192 l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~f~~v~ 234 (304)
T 2o07_A 192 YQLMKTALKEDGVLCCQGECQWLHLDLIKEMRQFCQSLFPVVA 234 (304)
T ss_dssp HHHHHHHEEEEEEEEEEEECTTTCHHHHHHHHHHHHHHCSEEE
T ss_pred HHHHHhccCCCeEEEEecCCcccchHHHHHHHHHHHHhCCCce
Confidence 9999999999999999987888877788888999999999875
No 6
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.97 E-value=5.8e-31 Score=211.68 Aligned_cols=195 Identities=53% Similarity=0.956 Sum_probs=160.2
Q ss_pred cceeeeeeeceeecCCCC--------CCCCCcEEEEcCeeeeeccchhhHHHHHHhhcccCCCCCCeEEEEeCCchHhHH
Q psy4592 2 GVSLSLQVEEPFYPSSSN--------RKEFGTALILDGIIQCTEFDEFSYSEMIAFLPLCSHPNPKKVLIVGGGDGGVAR 73 (197)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~--------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~ 73 (197)
|+..++.++++|++++|+ +..+|+.+++|+.+++..++.+.|++++.+++++.++++++|||||||+|.++.
T Consensus 45 ~~~~~~~~~~vl~~~~s~~q~i~v~~~~~~g~~l~ldg~~q~~~~de~~Y~e~l~~l~l~~~~~~~~VLdIG~G~G~~~~ 124 (314)
T 2b2c_A 45 GQAFSLQVKKVLFHEKSKYQDVLVFESTTYGNVLVLDGIVQATERDEFSYQEMLAHLPMFAHPDPKRVLIIGGGDGGILR 124 (314)
T ss_dssp TEEEEEEEEEEEEEEECSSCEEEEEEETTTEEEEEETTEEEEESSSSSHHHHHHHHHHHHHSSSCCEEEEESCTTSHHHH
T ss_pred CceEEeecccEEEEEECCCCCEEEEEcCCCCEEEEECCEeecCCcchhHHHHHHHHHHHhhCCCCCEEEEEcCCcCHHHH
Confidence 566789999999999998 556899999999999998888999999988876656778899999999999999
Q ss_pred HHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEEECCCCCCCCCcccccHHH
Q psy4592 74 EVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVIITDSSDPVGPAESLFQASY 153 (197)
Q Consensus 74 ~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~~~~~~~~~~~~~l~~~~~ 153 (197)
++++..+..+++++|+|+.+++.|+++++....++..++++++++|+.++++...++||+|++|++.+..+...+++.++
T Consensus 125 ~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~d~~~~~~~~~~l~t~~~ 204 (314)
T 2b2c_A 125 EVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVIITDSSDPVGPAESLFGQSY 204 (314)
T ss_dssp HHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEEECCC-------------H
T ss_pred HHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEEEcCCCCCCcchhhhHHHH
Confidence 99987666899999999999999999987532223357899999999998776567899999999877766666777899
Q ss_pred HHHHHhhcCCCcEEEEEcCCCCcChhHHHHHHHHHHhhCCccc
Q psy4592 154 FELMSRALRPGGIVCSQAGTLWYSLDCVGNTLQHCASVFPRLH 196 (197)
Q Consensus 154 ~~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~f~~v~ 196 (197)
++.++++|+|||+++++..++|...+..+.+.+.++++|++++
T Consensus 205 l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~vF~~v~ 247 (314)
T 2b2c_A 205 YELLRDALKEDGILSSQGESVWLHLPLIAHLVAFNRKIFPAVT 247 (314)
T ss_dssp HHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHHHCSEEE
T ss_pred HHHHHhhcCCCeEEEEECCCcccCHHHHHHHHHHHHHHCCcce
Confidence 9999999999999999988888888889999999999999875
No 7
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.97 E-value=4.1e-30 Score=207.50 Aligned_cols=195 Identities=41% Similarity=0.763 Sum_probs=169.1
Q ss_pred cceeeeeeeceeecCCCC--------CCCCCcEEEEcCeeeeeccchhhHHHHHHhhcccCCCCCCeEEEEeCCchHhHH
Q psy4592 2 GVSLSLQVEEPFYPSSSN--------RKEFGTALILDGIIQCTEFDEFSYSEMIAFLPLCSHPNPKKVLIVGGGDGGVAR 73 (197)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~--------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~ 73 (197)
|...++.++++|++++|+ +..||+.+++|+..+.+.++.+.|++++.+++++.++++.+|||||||+|.++.
T Consensus 53 ~~~~~~~~~~~l~~~~s~~q~i~v~~~~~~g~~l~ldg~~~~~~~de~~y~e~l~~~~l~~~~~~~~VLdiG~G~G~~~~ 132 (321)
T 2pt6_A 53 GQAFSLKIKKILYETKSKYQNVLVFESTTYGKVLVLDGVIQLTEKDEFAYHEMMTHVPMTVSKEPKNVLVVGGGDGGIIR 132 (321)
T ss_dssp TCCEEEEEEEEEEEEECSSCEEEEEEESSSCEEEEETTEEEEETTTHHHHHHHHHHHHHHHSSSCCEEEEEECTTCHHHH
T ss_pred CceEEEecccEEEEEECCCceEEEEEcCCCcEEEEECCEeeeCcccchHHHHHHHHHHHhcCCCCCEEEEEcCCccHHHH
Confidence 567789999999999999 457899999999999999999999999988776656778899999999999999
Q ss_pred HHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEEECCCCCCCCCcccccHHH
Q psy4592 74 EVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVIITDSSDPVGPAESLFQASY 153 (197)
Q Consensus 74 ~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~~~~~~~~~~~~~l~~~~~ 153 (197)
++++..+..+++++|+|+.+++.|+++++.+.++++.++++++++|+.++++...++||+|++|++.+..+...+++.++
T Consensus 133 ~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi~d~~~p~~~~~~l~~~~~ 212 (321)
T 2pt6_A 133 ELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIVDSSDPIGPAETLFNQNF 212 (321)
T ss_dssp HHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEEECCCSSSGGGGGSSHHH
T ss_pred HHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEEECCcCCCCcchhhhHHHH
Confidence 99987666899999999999999999987532223357899999999988766567899999999877666666777899
Q ss_pred HHHHHhhcCCCcEEEEEcCCCCcChhHHHHHHHHHHhhCCccc
Q psy4592 154 FELMSRALRPGGIVCSQAGTLWYSLDCVGNTLQHCASVFPRLH 196 (197)
Q Consensus 154 ~~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~f~~v~ 196 (197)
++.++++|+|||+++++..+++...+.++.+.+.+++.|++++
T Consensus 213 l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~ 255 (321)
T 2pt6_A 213 YEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKKLFKKVE 255 (321)
T ss_dssp HHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHHCCCeE
Confidence 9999999999999999988888888899999999999999875
No 8
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.97 E-value=1.4e-30 Score=208.12 Aligned_cols=195 Identities=40% Similarity=0.727 Sum_probs=161.4
Q ss_pred cceeeeeeeceeecCCCC--------CCCCCcEEEEcCeeeeeccchhhHHHHHHhhcccCCCCCCeEEEEeCCchHhHH
Q psy4592 2 GVSLSLQVEEPFYPSSSN--------RKEFGTALILDGIIQCTEFDEFSYSEMIAFLPLCSHPNPKKVLIVGGGDGGVAR 73 (197)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~--------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~ 73 (197)
|...++.++++|++++|+ +..+|+.+++|+..++...+.+.|++++.+++++.++++.+|||||||+|.++.
T Consensus 27 ~~~~~~~~~~~l~~~~s~~q~i~v~~~~~~g~~l~ldg~~~~~~~de~~y~e~l~~~~l~~~~~~~~VLdiG~G~G~~~~ 106 (296)
T 1inl_A 27 NVGLFMKMNRVIYSGQSDIQRIDIFENPDLGVVFALDGITMTTEKDEFMYHEMLAHVPMFLHPNPKKVLIIGGGDGGTLR 106 (296)
T ss_dssp SEEEEEECSEEEEEEECSSCEEEEEEETTTEEEEEETTEEEEETTTHHHHHHHHHHHHHHHSSSCCEEEEEECTTCHHHH
T ss_pred CceEEeecccEEEEEECCCccEEEEEcCCCcEEEEECCEEeecccchhHHHHHHhHHHHhcCCCCCEEEEEcCCcCHHHH
Confidence 567889999999999998 556899999999999888888899999988876656777899999999999999
Q ss_pred HHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEEECCCCC-CCCCcccccHH
Q psy4592 74 EVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVIITDSSDP-VGPAESLFQAS 152 (197)
Q Consensus 74 ~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~~~~~~~-~~~~~~l~~~~ 152 (197)
++++..+..+++++|+|+.+++.|+++++.+..+++.++++++++|+.++++...++||+|++|++.+ ..+...+++.+
T Consensus 107 ~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~d~~~~~~~~~~~l~~~~ 186 (296)
T 1inl_A 107 EVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVIIIDSTDPTAGQGGHLFTEE 186 (296)
T ss_dssp HHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEEEEC----------CCSHH
T ss_pred HHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEEEcCCCcccCchhhhhHHH
Confidence 99987666899999999999999999875321112357899999999987765567899999999877 55555667799
Q ss_pred HHHHHHhhcCCCcEEEEEcCCCCcChhHHHHHHHHHHhhCCccc
Q psy4592 153 YFELMSRALRPGGIVCSQAGTLWYSLDCVGNTLQHCASVFPRLH 196 (197)
Q Consensus 153 ~~~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~f~~v~ 196 (197)
+++.++++|+|||++++++.+++...+.+..+.+.++++|++|+
T Consensus 187 ~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~ 230 (296)
T 1inl_A 187 FYQACYDALKEDGVFSAETEDPFYDIGWFKLAYRRISKVFPITR 230 (296)
T ss_dssp HHHHHHHHEEEEEEEEEECCCTTTTHHHHHHHHHHHHHHCSEEE
T ss_pred HHHHHHHhcCCCcEEEEEccCcccCHHHHHHHHHHHHHHCCceE
Confidence 99999999999999999998888888889999999999999875
No 9
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.97 E-value=4.6e-30 Score=203.74 Aligned_cols=192 Identities=39% Similarity=0.707 Sum_probs=162.7
Q ss_pred cceeeeeeeceeecCCCC--------CCCCCcEEEEcCeeeeeccchhhHHHHHHhhcccCCCCCCeEEEEeCCchHhHH
Q psy4592 2 GVSLSLQVEEPFYPSSSN--------RKEFGTALILDGIIQCTEFDEFSYSEMIAFLPLCSHPNPKKVLIVGGGDGGVAR 73 (197)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~--------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~ 73 (197)
|+..++.++++|++++|+ +..+|+.|++||..++...+.+.|++++.+++++.++++++|||||||+|.++.
T Consensus 12 ~~~~~~~~~~~l~~~~s~~~~i~v~~~~~~g~~L~ldg~~q~~~~d~~~y~e~l~~~~l~~~~~~~~VLdiG~G~G~~~~ 91 (281)
T 1mjf_A 12 GYGVAFKIKKKIYEKLSKYQKIEVYETEGFGRLLALDGTVQLVTLGERSYHEPLVHPAMLAHPKPKRVLVIGGGDGGTVR 91 (281)
T ss_dssp GEEEEECEEEEEEEEECSSCEEEEEEESSSCEEEEETTEEEEETTTTHHHHHHHHHHHHHHSSCCCEEEEEECTTSHHHH
T ss_pred CceEEEeeccEEEEeeCCCccEEEEECCCccEEEEECCEeeeccccchHHHHHHHHHHHhhCCCCCeEEEEcCCcCHHHH
Confidence 567889999999999999 456899999999999988888999998888766556778899999999999999
Q ss_pred HHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCC-------CCCCeEEEEcchHHHHhhcCCceeEEEECCCCCCCCCc
Q psy4592 74 EVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGL-------SDPRLTVHVGDGFRFMSEHQQEFDVIITDSSDPVGPAE 146 (197)
Q Consensus 74 ~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~D~I~~~~~~~~~~~~ 146 (197)
++++. +..++++||+|+.+++.|++++ ....++ ..++++++++|+.+++.. .++||+|++|++.+..+..
T Consensus 92 ~l~~~-~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~~fD~Ii~d~~~~~~~~~ 168 (281)
T 1mjf_A 92 EVLQH-DVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NRGFDVIIADSTDPVGPAK 168 (281)
T ss_dssp HHTTS-CCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CCCEEEEEEECCCCC----
T ss_pred HHHhC-CCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcc-cCCeeEEEECCCCCCCcch
Confidence 99988 6689999999999999999998 432222 356899999999988776 6789999999988776666
Q ss_pred ccccHHHHHHHHhhcCCCcEEEEEcCCCCcChhHHHHHHHHHHhhCCccc
Q psy4592 147 SLFQASYFELMSRALRPGGIVCSQAGTLWYSLDCVGNTLQHCASVFPRLH 196 (197)
Q Consensus 147 ~l~~~~~~~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~f~~v~ 196 (197)
.+++.++++.++++|+|||+++++..+++...+.++.+.+.+++.|+++.
T Consensus 169 ~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~f~~v~ 218 (281)
T 1mjf_A 169 VLFSEEFYRYVYDALNNPGIYVTQAGSVYLFTDELISAYKEMKKVFDRVY 218 (281)
T ss_dssp -TTSHHHHHHHHHHEEEEEEEEEEEEETTTSHHHHHHHHHHHHHHCSEEE
T ss_pred hhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHHCCceE
Confidence 67679999999999999999999987787778889999999999999875
No 10
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.97 E-value=2e-30 Score=208.77 Aligned_cols=195 Identities=35% Similarity=0.627 Sum_probs=165.5
Q ss_pred cceeeeeeeceeecCCCC--------CCCCCcEEEEcCeeeeeccchhhHHHHHHhhcccCCCCCCeEEEEeCCchHhHH
Q psy4592 2 GVSLSLQVEEPFYPSSSN--------RKEFGTALILDGIIQCTEFDEFSYSEMIAFLPLCSHPNPKKVLIVGGGDGGVAR 73 (197)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~--------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~ 73 (197)
|...++.++++|++++|+ +..+|+.+++||..|+...+.+.|++++.+++++.++++++|||||||+|.++.
T Consensus 14 ~~~~~~~~~~vl~~~~s~~q~i~v~~~~~~g~~l~ldg~~q~~~~~e~~Y~e~l~~~~l~~~~~~~~VLdiG~G~G~~~~ 93 (314)
T 1uir_A 14 YETLVRRMERVIASGKTPFQDYFLFESKGFGKVLILDKDVQSTERDEYIYHETLVHPAMLTHPEPKRVLIVGGGEGATLR 93 (314)
T ss_dssp SEEEEEECSEEEEEEECSSCEEEEEEETTTEEEEEETTEEEEETTTHHHHHHHHHHHHHHHSSCCCEEEEEECTTSHHHH
T ss_pred CcEEEEecceEEEEEECCCCCEEEEEcCCCcEEEEECCEEeeeecchhHHHHHHHHHHHhcCCCCCeEEEEcCCcCHHHH
Confidence 567788999999999998 567899999999999998899999999998877666788999999999999999
Q ss_pred HHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCC-CCCCCeEEEEcchHHHHhhcCCceeEEEECCCCCC---CCCcccc
Q psy4592 74 EVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVG-LSDPRLTVHVGDGFRFMSEHQQEFDVIITDSSDPV---GPAESLF 149 (197)
Q Consensus 74 ~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~D~I~~~~~~~~---~~~~~l~ 149 (197)
++++..+..++++||+|+.+++.|+++++.+..+ ++.++++++++|+.++++...++||+|++|.+.+. .+...++
T Consensus 94 ~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~d~~~~~~~~~~~~~l~ 173 (314)
T 1uir_A 94 EVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVVIIDLTDPVGEDNPARLLY 173 (314)
T ss_dssp HHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEEEEECCCCBSTTCGGGGGS
T ss_pred HHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEEEECCCCcccccCcchhcc
Confidence 9998766679999999999999999987532111 23578999999999987766678999999998877 5556677
Q ss_pred cHHHHHHHHhhcCCCcEEEEEcCCCC-cChhHHHHHHHHHHhhCCccc
Q psy4592 150 QASYFELMSRALRPGGIVCSQAGTLW-YSLDCVGNTLQHCASVFPRLH 196 (197)
Q Consensus 150 ~~~~~~~~~~~LkpgG~l~~~~~~~~-~~~~~~~~~~~~~~~~f~~v~ 196 (197)
+.++++.++++|||||+++++..+++ ...+..+.+.+.++++|++++
T Consensus 174 ~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~l~~~F~~v~ 221 (314)
T 1uir_A 174 TVEFYRLVKAHLNPGGVMGMQTGMILLTHHRVHPVVHRTVREAFRYVR 221 (314)
T ss_dssp SHHHHHHHHHTEEEEEEEEEEEEEECC---CHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHhcCCCcEEEEEccCccccCHHHHHHHHHHHHHHCCceE
Confidence 79999999999999999999987766 556788899999999999875
No 11
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.97 E-value=1.2e-29 Score=205.44 Aligned_cols=191 Identities=26% Similarity=0.412 Sum_probs=156.7
Q ss_pred cceeeeeeeceeecCCCC--------CCCCCcEEEEcCeeeeeccchhhHHHHHHhhcccCCCCCCeEEEEeCCchHhHH
Q psy4592 2 GVSLSLQVEEPFYPSSSN--------RKEFGTALILDGIIQCTEFDEFSYSEMIAFLPLCSHPNPKKVLIVGGGDGGVAR 73 (197)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~--------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~ 73 (197)
|+..+++++++|++++|+ +..||+.|++||..|++..+ +.|++++.+.++ .++++++||+||||+|+++.
T Consensus 127 ~~~~~~~v~~vl~~~~S~yQ~I~V~es~~~G~~L~LDG~~q~te~D-~~YhE~l~~~~~-~~p~pkrVL~IGgG~G~~ar 204 (364)
T 2qfm_A 127 GRLVEYDIDEVVYDEDSPYQNIKILHSKQFGNILILSGDVNLAESD-LAYTRAIMGSGK-EDYTGKDVLILGGGDGGILC 204 (364)
T ss_dssp CCCBBCCEEEEEEEEECSSCEEEEEEETTTEEEEEETTEEEEETTC-HHHHHHHTTTTC-CCCTTCEEEEEECTTCHHHH
T ss_pred CcEEEEEeeeEEEeccCCCeeEEEEEeCCcceEEEECCEEeeecCc-hHHHHHHhhhhh-hCCCCCEEEEEECChhHHHH
Confidence 567899999999999999 67799999999999999999 999999888776 46788999999999999999
Q ss_pred HHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCC-CCCC---CCeEEEEcchHHHHhh---cCCceeEEEECCCC-CCCC-
Q psy4592 74 EVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAV-GLSD---PRLTVHVGDGFRFMSE---HQQEFDVIITDSSD-PVGP- 144 (197)
Q Consensus 74 ~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~-~~~~---~~~~~~~~d~~~~~~~---~~~~~D~I~~~~~~-~~~~- 144 (197)
++++..+ .++++||+|+.+++.|+++++.++. .++. ++++++++|+.+++.. ..++||+|++|++. +...
T Consensus 205 ellk~~~-~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~~fDvII~D~~d~P~~~~ 283 (364)
T 2qfm_A 205 EIVKLKP-KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGREFDYVINDLTAVPISTS 283 (364)
T ss_dssp HHHTTCC-SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCCEEEEEEECCSSCCCCC
T ss_pred HHHHCCC-CEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCCCceEEEECCCCcccCcC
Confidence 9998865 7999999999999999999875421 1233 3799999999999875 46789999999987 5442
Q ss_pred CcccccHHHHHHH----HhhcCCCcEEEEEcCCCCcChhHHHHHHH-HHHhhCCcccC
Q psy4592 145 AESLFQASYFELM----SRALRPGGIVCSQAGTLWYSLDCVGNTLQ-HCASVFPRLHC 197 (197)
Q Consensus 145 ~~~l~~~~~~~~~----~~~LkpgG~l~~~~~~~~~~~~~~~~~~~-~~~~~f~~v~~ 197 (197)
...+++.+|++.+ +++|+|||+++++++++.. .+. ...++ .+++.|+.|++
T Consensus 284 p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s~~~-~e~-~~~~~~~l~~~F~~v~~ 339 (364)
T 2qfm_A 284 PEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCVNL-TEA-LSLYEEQLGRLYCPVEF 339 (364)
T ss_dssp ----CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTC-HHH-HHHHHHHHTTSSSCEEE
T ss_pred chhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCCcch-HHH-HHHHHHHHHHhCCceEE
Confidence 2247788999998 8999999999999988766 333 44554 58889998863
No 12
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.97 E-value=1.7e-29 Score=204.65 Aligned_cols=193 Identities=48% Similarity=0.944 Sum_probs=165.9
Q ss_pred cceeeeeeeceeecCCCC--------CCCCCcEEEEcCeeeeeccchhhHHHHHHhhcccCCCCCCeEEEEeCCchHhHH
Q psy4592 2 GVSLSLQVEEPFYPSSSN--------RKEFGTALILDGIIQCTEFDEFSYSEMIAFLPLCSHPNPKKVLIVGGGDGGVAR 73 (197)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~--------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~ 73 (197)
|...+++++++|++++|+ +..||+.+++|+.++...++.+.|++++.+++++..+++++|||||||+|.++.
T Consensus 57 ~~~~~~~v~~vl~~~~s~~q~I~v~~~~~~g~~l~ldg~~~~~~~de~~y~e~L~~l~l~~~~~~~~VLdIG~G~G~~a~ 136 (334)
T 1xj5_A 57 GEAHSLKVEKVLFQGKSDYQDVIVFQSATYGKVLVLDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLR 136 (334)
T ss_dssp TEEEEEEEEEEEEEEECSSCEEEEEEESSSCEEEEETTEEEEETTTHHHHHHHHHHHHHTTSSCCCEEEEETCSSSHHHH
T ss_pred CceEEEEeeeEEEEeecCCeEEEEEEcCCCCeEEEECCEeecCcCcchHHHHHHHHHHHhhCCCCCEEEEECCCccHHHH
Confidence 667889999999999999 567999999999999999999999999999887666778899999999999999
Q ss_pred HHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhh-cCCceeEEEECCCCCCCCCcccccHH
Q psy4592 74 EVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSE-HQQEFDVIITDSSDPVGPAESLFQAS 152 (197)
Q Consensus 74 ~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~~~D~I~~~~~~~~~~~~~l~~~~ 152 (197)
.+++..+..++++||+|+.+++.|+++++.+..++..++++++++|+.++++. ..++||+|++|++.+..+...++..+
T Consensus 137 ~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlIi~d~~~p~~~~~~l~~~~ 216 (334)
T 1xj5_A 137 EVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAVIVDSSDPIGPAKELFEKP 216 (334)
T ss_dssp HHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEEEECCCCTTSGGGGGGSHH
T ss_pred HHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEEEECCCCccCcchhhhHHH
Confidence 99988666899999999999999999875321122346899999999988764 24689999999987666555566789
Q ss_pred HHHHHHhhcCCCcEEEEEcCCCCcChhHHHHHHHHHHhhCCc
Q psy4592 153 YFELMSRALRPGGIVCSQAGTLWYSLDCVGNTLQHCASVFPR 194 (197)
Q Consensus 153 ~~~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~f~~ 194 (197)
+++.++++|+|||++++++.++|......+...+.+++.|+.
T Consensus 217 ~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~ 258 (334)
T 1xj5_A 217 FFQSVARALRPGGVVCTQAESLWLHMDIIEDIVSNCREIFKG 258 (334)
T ss_dssp HHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHHHCSS
T ss_pred HHHHHHHhcCCCcEEEEecCCccccHHHHHHHHHHHHHhCcc
Confidence 999999999999999999888888777788888999999985
No 13
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.97 E-value=2e-29 Score=202.13 Aligned_cols=195 Identities=43% Similarity=0.845 Sum_probs=160.8
Q ss_pred cceeeeeeeceeecCCCC--------CC---CCCcEEEEcCeeeeeccchhhHHHHHHhhcccCCCCCCeEEEEeCCchH
Q psy4592 2 GVSLSLQVEEPFYPSSSN--------RK---EFGTALILDGIIQCTEFDEFSYSEMIAFLPLCSHPNPKKVLIVGGGDGG 70 (197)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~--------~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~ 70 (197)
|+..++.++++|++++|+ +. .||+.+++||..++...+.+.|++++.++++..++++.+|||||||+|.
T Consensus 29 ~~~~~~~~~~~l~~~~s~~q~i~v~~~~p~g~~g~~l~ldg~~~~~~~de~~y~e~l~~~~l~~~~~~~~VLdiG~G~G~ 108 (304)
T 3bwc_A 29 GQAMSLRVEKVLYDAPTKFQHLTIFESDPKGPWGTVMALDGCIQVTDYDEFVYHEVLGHTSLCSHPKPERVLIIGGGDGG 108 (304)
T ss_dssp SEEEEEEEEEEEEEEECSSSEEEEEEECTTSSCCEEEEETTEEEEETTTHHHHHHHHHHHHHTTSSSCCEEEEEECTTSH
T ss_pred CceEEEecccEEEEeECCCCCEEEEEecCCCccceEEEECCeeeeecccchHHHHHHhhhhhhcCCCCCeEEEEcCCCCH
Confidence 567889999999999998 44 6899999999999998888999999998877666778899999999999
Q ss_pred hHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhh-cCCceeEEEECCCCCCCCCcccc
Q psy4592 71 VAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSE-HQQEFDVIITDSSDPVGPAESLF 149 (197)
Q Consensus 71 ~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~~~D~I~~~~~~~~~~~~~l~ 149 (197)
++..+++..+..++++||+|+.+++.|+++++.+......++++++++|+.+++.. ..++||+|++|.+.+..+...++
T Consensus 109 ~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvIi~d~~~~~~~~~~l~ 188 (304)
T 3bwc_A 109 VLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVVIIDTTDPAGPASKLF 188 (304)
T ss_dssp HHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEEEEECC---------C
T ss_pred HHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEEEECCCCccccchhhh
Confidence 99999987666799999999999999999874221112457899999999987754 46789999999988877777788
Q ss_pred cHHHHHHHHhhcCCCcEEEEEcCCCCcChhHHHHHHHHHHhh-CCccc
Q psy4592 150 QASYFELMSRALRPGGIVCSQAGTLWYSLDCVGNTLQHCASV-FPRLH 196 (197)
Q Consensus 150 ~~~~~~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~-f~~v~ 196 (197)
+.+++++++++|||||+++++..+++......+.+.+.+++. |+.|+
T Consensus 189 ~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~GF~~v~ 236 (304)
T 3bwc_A 189 GEAFYKDVLRILKPDGICCNQGESIWLDLELIEKMSRFIRETGFASVQ 236 (304)
T ss_dssp CHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHHhCCCCcEE
Confidence 899999999999999999999888888778888999999999 98774
No 14
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=99.96 E-value=4.9e-29 Score=202.51 Aligned_cols=191 Identities=26% Similarity=0.375 Sum_probs=161.0
Q ss_pred cceeeeeeeceeecCCCC--------CCCCCcEEEEcCeeeeeccchhhHHHHHHhhcccCCCCCCeEEEEeCCchHhHH
Q psy4592 2 GVSLSLQVEEPFYPSSSN--------RKEFGTALILDGIIQCTEFDEFSYSEMIAFLPLCSHPNPKKVLIVGGGDGGVAR 73 (197)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~--------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~ 73 (197)
|..++++++++|++++|+ +..||+.|++||.+|++..+ +.|++++.+.+++.+ ++++||.||.|.|+.++
T Consensus 144 g~~~~y~v~~vl~~~~S~yQ~I~V~es~~~Gr~L~LDG~~Q~te~D-~~Y~e~l~h~~l~~~-~pkrVLIIGgGdG~~~r 221 (381)
T 3c6k_A 144 GRLVEYDIDEVVYDEDSPYQNIKILHSKQFGNILILSGDVNLAESD-LAYTRAIMGSGKEDY-TGKDVLILGGGDGGILC 221 (381)
T ss_dssp CCCBBCCEEEEEEEEECSSCEEEEEEETTTEEEEEETTEEEEETTC-HHHHHHHTTTTCCCC-TTCEEEEEECTTCHHHH
T ss_pred CcEEEEEeEEEEEeCCCCCceEEEEEcCCcceEEEECCceeeeCCh-HHHHHHHHHHHhhcC-CCCeEEEECCCcHHHHH
Confidence 778999999999999999 77899999999999999988 679999998877654 57899999999999999
Q ss_pred HHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCC-CC---CCCeEEEEcchHHHHhh---cCCceeEEEECCCCCC----
Q psy4592 74 EVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVG-LS---DPRLTVHVGDGFRFMSE---HQQEFDVIITDSSDPV---- 142 (197)
Q Consensus 74 ~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~-~~---~~~~~~~~~d~~~~~~~---~~~~~D~I~~~~~~~~---- 142 (197)
++++..+ .+++.|||||++++.++++++.+..+ ++ .++++++.+|+.+++.. ..++||+|+.|.+.+.
T Consensus 222 evlkh~~-~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~~yDvIIvDl~D~~~s~~ 300 (381)
T 3c6k_A 222 EIVKLKP-KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGREFDYVINDLTAVPISTS 300 (381)
T ss_dssp HHHTTCC-SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCCEEEEEEECCSSCCCCC
T ss_pred HHHhcCC-ceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccCceeEEEECCCCCcccCc
Confidence 9998755 79999999999999999998765322 22 35699999999999864 3578999999976532
Q ss_pred --CCCcccccHHHHHHHHhhcCCCcEEEEEcCCCCcChhHHHHHHHHHHhhCCccc
Q psy4592 143 --GPAESLFQASYFELMSRALRPGGIVCSQAGTLWYSLDCVGNTLQHCASVFPRLH 196 (197)
Q Consensus 143 --~~~~~l~~~~~~~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~f~~v~ 196 (197)
.+...+++.+|++.++++|+|||+++.++++++. .+.+..+.+.+++.|+.|+
T Consensus 301 p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~~s~~~-~~~~~~i~~tl~~vF~~v~ 355 (381)
T 3c6k_A 301 PEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCVNL-TEALSLYEEQLGRLYCPVE 355 (381)
T ss_dssp ----CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTC-HHHHHHHHHHHTTSSSCEE
T ss_pred ccCcchHHHHHHHHHHHHHhcCCCCEEEEecCCCcc-hhHHHHHHHHHHHhCCcce
Confidence 2345678899999999999999999999888876 4677888999999999874
No 15
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.96 E-value=3.2e-28 Score=194.84 Aligned_cols=171 Identities=22% Similarity=0.318 Sum_probs=145.5
Q ss_pred CCCCcEEEEcCeeeeec------cchhhHHHHHHhhccc---CCCCCC--eEEEEeCCchHhHHHHhcCCCCccEEEEEc
Q psy4592 21 KEFGTALILDGIIQCTE------FDEFSYSEMIAFLPLC---SHPNPK--KVLIVGGGDGGVAREVLKHPSVESAYLVEI 89 (197)
Q Consensus 21 ~~~~~~l~~~~~~~~~~------~~~~~~~~~~~~~~~~---~~~~~~--~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~ 89 (197)
+.+|+.|++||..|+.. ...+.|++++.+..++ .+++++ +|||||||+|.++.++++..+..++++||+
T Consensus 42 ~~~g~~L~lDG~~Qs~~~l~dP~~le~~Y~e~m~~~~~~l~~~~p~p~~~rVLdIG~G~G~la~~la~~~p~~~v~~VEi 121 (317)
T 3gjy_A 42 TTDGWLISINGVPSSHIVLGQPQALEFEYMRWIATGARAFIDAHQDASKLRITHLGGGACTMARYFADVYPQSRNTVVEL 121 (317)
T ss_dssp STTEEEEEETTEEEEEEETTCTTCCCSHHHHHHHHHHHHHHHHHSCGGGCEEEEESCGGGHHHHHHHHHSTTCEEEEEES
T ss_pred CCceEEEEECCEeEEEEECCCCcchhhHHHHHHHHHHHhhcccCCCCCCCEEEEEECCcCHHHHHHHHHCCCcEEEEEEC
Confidence 35899999999999874 4689999999888765 355555 999999999999999998555579999999
Q ss_pred CHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhc-CCceeEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEE
Q psy4592 90 DNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEH-QQEFDVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVC 168 (197)
Q Consensus 90 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~~~D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~ 168 (197)
|+.+++.|+++++.. ..++++++++|+.+++... .++||+|++|.+.+.....++++.++++.++++|+|||+|+
T Consensus 122 dp~vi~~Ar~~~~~~----~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~~~~~~~~L~t~efl~~~~r~LkpgGvlv 197 (317)
T 3gjy_A 122 DAELARLSREWFDIP----RAPRVKIRVDDARMVAESFTPASRDVIIRDVFAGAITPQNFTTVEFFEHCHRGLAPGGLYV 197 (317)
T ss_dssp CHHHHHHHHHHSCCC----CTTTEEEEESCHHHHHHTCCTTCEEEEEECCSTTSCCCGGGSBHHHHHHHHHHEEEEEEEE
T ss_pred CHHHHHHHHHhcccc----CCCceEEEECcHHHHHhhccCCCCCEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEE
Confidence 999999999998753 3578999999999988653 57899999999887776678888999999999999999999
Q ss_pred EEcCCCCcChhHHHHHHHHHHhhCCccc
Q psy4592 169 SQAGTLWYSLDCVGNTLQHCASVFPRLH 196 (197)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~f~~v~ 196 (197)
++..+. .....++.+++.++++|++|.
T Consensus 198 ~~~~~~-~~~~~~~~~~~tL~~vF~~v~ 224 (317)
T 3gjy_A 198 ANCGDH-SDLRGAKSELAGMMEVFEHVA 224 (317)
T ss_dssp EEEEEC-TTCHHHHHHHHHHHHHCSEEE
T ss_pred EEecCC-cchHHHHHHHHHHHHHCCceE
Confidence 998643 234678899999999999875
No 16
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.95 E-value=2.1e-28 Score=192.24 Aligned_cols=179 Identities=19% Similarity=0.217 Sum_probs=153.1
Q ss_pred cceeeeeeeceeecCCCC--------CCCCCcEEEEcCeeeeeccchhhHHHHHHhhcccCCCCCCeEEEEeCCchHhHH
Q psy4592 2 GVSLSLQVEEPFYPSSSN--------RKEFGTALILDGIIQCTEFDEFSYSEMIAFLPLCSHPNPKKVLIVGGGDGGVAR 73 (197)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~--------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~ 73 (197)
|+..++.++++|++++|+ +..+|+.+++||. |+...+.+.|++++.+++++.++++++|||||||+|.++.
T Consensus 10 ~~~~~~~~~~vl~~~~s~~q~i~v~~~~~~g~~l~ldg~-q~~~~d~~~y~e~l~~~~~~~~~~~~~VL~iG~G~G~~~~ 88 (262)
T 2cmg_A 10 YLRKEYTIEAKLLDVRSEHNILEIFKSKDFGEIAMLNRQ-LLFKNFLHIESELLAHMGGCTKKELKEVLIVDGFDLELAH 88 (262)
T ss_dssp TEEEEEECSEEEEEEECSSCEEEEEEETTTEEEEEETTE-EEEGGGTHHHHHHHHHHHHTTSSCCCEEEEESSCCHHHHH
T ss_pred CceEEEEEeeEEEeeECCCceEEEEECCCccEEEEEcCc-ccccchHHHHHHHHHHHhhhcCCCCCEEEEEeCCcCHHHH
Confidence 567889999999999998 5568999999999 9888899999999999887767788999999999999999
Q ss_pred HHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEEECCCCCCCCCcccccHHH
Q psy4592 74 EVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVIITDSSDPVGPAESLFQASY 153 (197)
Q Consensus 74 ~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~~~~~~~~~~~~~l~~~~~ 153 (197)
++++. + .+++++|+|+++++.|+++++.+..++..++++++.+|+.+++ ++||+|++|.+. + ..+
T Consensus 89 ~ll~~-~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~----~~fD~Ii~d~~d-----p----~~~ 153 (262)
T 2cmg_A 89 QLFKY-D-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI----KKYDLIFCLQEP-----D----IHR 153 (262)
T ss_dssp HHTTS-S-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC----CCEEEEEESSCC-----C----HHH
T ss_pred HHHhC-C-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH----hhCCEEEECCCC-----h----HHH
Confidence 99988 6 8999999999999999998764211223578999999998754 689999999642 2 348
Q ss_pred HHHHHhhcCCCcEEEEEcCCCCcChhHHHHHHHHHHhhCCccc
Q psy4592 154 FELMSRALRPGGIVCSQAGTLWYSLDCVGNTLQHCASVFPRLH 196 (197)
Q Consensus 154 ~~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~f~~v~ 196 (197)
++.++++|+|||+++++..+++...+.+..+.+.+++.|+++.
T Consensus 154 ~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~~~ 196 (262)
T 2cmg_A 154 IDGLKRMLKEDGVFISVAKHPLLEHVSMQNALKNMGGVFSVAM 196 (262)
T ss_dssp HHHHHTTEEEEEEEEEEEECTTTCHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHhCCceE
Confidence 9999999999999999987887777788889999999999864
No 17
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.77 E-value=6.6e-19 Score=138.08 Aligned_cols=109 Identities=12% Similarity=0.157 Sum_probs=86.9
Q ss_pred CCCCCeEEEEeCCchHhHHHHhcCC--CCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCcee
Q psy4592 55 HPNPKKVLIVGGGDGGVAREVLKHP--SVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFD 132 (197)
Q Consensus 55 ~~~~~~vLdiG~G~G~~~~~l~~~~--~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D 132 (197)
.+++.+|||||||+|..+..+++.. +..++++||+++.|++.|++++...+ ...+++++++|+.+. + .++||
T Consensus 68 ~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~---~~~~v~~~~~D~~~~-~--~~~~d 141 (261)
T 4gek_A 68 VQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYK---APTPVDVIEGDIRDI-A--IENAS 141 (261)
T ss_dssp CCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSC---CSSCEEEEESCTTTC-C--CCSEE
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhc---cCceEEEeecccccc-c--ccccc
Confidence 4567899999999999999988753 45699999999999999999875421 235899999998653 2 36799
Q ss_pred EEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 133 VIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 133 ~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
+|+++...++.++.. ...++++++++|||||.|++..
T Consensus 142 ~v~~~~~l~~~~~~~--~~~~l~~i~~~LkpGG~lii~e 178 (261)
T 4gek_A 142 MVVLNFTLQFLEPSE--RQALLDKIYQGLNPGGALVLSE 178 (261)
T ss_dssp EEEEESCGGGSCHHH--HHHHHHHHHHHEEEEEEEEEEE
T ss_pred cceeeeeeeecCchh--HhHHHHHHHHHcCCCcEEEEEe
Confidence 999988776654331 2568999999999999999864
No 18
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.77 E-value=1.3e-18 Score=134.46 Aligned_cols=109 Identities=19% Similarity=0.206 Sum_probs=87.6
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhh-cCCceeEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSE-HQQEFDVI 134 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~~~D~I 134 (197)
+++.+|||||||+|..+..+++..+ .++++||++|.+++.|+++... ...++.++.+|+.+.... ..++||.|
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~~-~~v~~id~~~~~~~~a~~~~~~-----~~~~~~~~~~~a~~~~~~~~~~~FD~i 132 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAPI-DEHWIIECNDGVFQRLRDWAPR-----QTHKVIPLKGLWEDVAPTLPDGHFDGI 132 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSCE-EEEEEEECCHHHHHHHHHHGGG-----CSSEEEEEESCHHHHGGGSCTTCEEEE
T ss_pred cCCCeEEEECCCccHHHHHHHHhCC-cEEEEEeCCHHHHHHHHHHHhh-----CCCceEEEeehHHhhcccccccCCceE
Confidence 5678999999999999999988755 6899999999999999998765 346789999999876544 46789999
Q ss_pred EECCCCCCCCCccc-ccHHHHHHHHhhcCCCcEEEEE
Q psy4592 135 ITDSSDPVGPAESL-FQASYFELMSRALRPGGIVCSQ 170 (197)
Q Consensus 135 ~~~~~~~~~~~~~l-~~~~~~~~~~~~LkpgG~l~~~ 170 (197)
+.|.........+. ..+.++++++|+|||||+|++.
T Consensus 133 ~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~ 169 (236)
T 3orh_A 133 LYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp EECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred EEeeeecccchhhhcchhhhhhhhhheeCCCCEEEEE
Confidence 99876433322222 1267899999999999999874
No 19
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.77 E-value=9.9e-18 Score=124.89 Aligned_cols=110 Identities=19% Similarity=0.248 Sum_probs=88.4
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhc-CCceeEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEH-QQEFDVI 134 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~~~D~I 134 (197)
.++.+|||+|||+|.++..+++. +..+++++|+++++++.|++++... ..++++++++|+.+..... .++||+|
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~----~~~~v~~~~~d~~~~~~~~~~~~fD~i 117 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSR-GAASVLFVESDQRSAAVIARNIEAL----GLSGATLRRGAVAAVVAAGTTSPVDLV 117 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT-TCSEEEEEECCHHHHHHHHHHHHHH----TCSCEEEEESCHHHHHHHCCSSCCSEE
T ss_pred CCCCEEEEeCCCcCHHHHHHHHC-CCCeEEEEECCHHHHHHHHHHHHHc----CCCceEEEEccHHHHHhhccCCCccEE
Confidence 45679999999999999987775 3468999999999999999987642 1257999999999876542 5789999
Q ss_pred EECCCCCCCCCcccccHHHHHHHHh--hcCCCcEEEEEcCC
Q psy4592 135 ITDSSDPVGPAESLFQASYFELMSR--ALRPGGIVCSQAGT 173 (197)
Q Consensus 135 ~~~~~~~~~~~~~l~~~~~~~~~~~--~LkpgG~l~~~~~~ 173 (197)
+++++.+..... ..+.++.+.+ +|+|||++++....
T Consensus 118 ~~~~p~~~~~~~---~~~~l~~~~~~~~L~pgG~l~~~~~~ 155 (189)
T 3p9n_A 118 LADPPYNVDSAD---VDAILAALGTNGWTREGTVAVVERAT 155 (189)
T ss_dssp EECCCTTSCHHH---HHHHHHHHHHSSSCCTTCEEEEEEET
T ss_pred EECCCCCcchhh---HHHHHHHHHhcCccCCCeEEEEEecC
Confidence 999986553111 2678899998 99999999998643
No 20
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.75 E-value=9.7e-18 Score=128.12 Aligned_cols=125 Identities=15% Similarity=0.157 Sum_probs=97.3
Q ss_pred CCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhh--cCCceeEE
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSE--HQQEFDVI 134 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~--~~~~~D~I 134 (197)
...+|||||||+|.++..+++..+...+++||+++.+++.|+++.... ...+++++++|+.+.++. ..++||.|
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~----~l~nv~~~~~Da~~~l~~~~~~~~~d~v 109 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEE----GLSNLRVMCHDAVEVLHKMIPDNSLRMV 109 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHT----TCSSEEEECSCHHHHHHHHSCTTCEEEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHh----CCCcEEEEECCHHHHHHHHcCCCChheE
Confidence 456999999999999999998777789999999999999999886532 235799999999987653 46799999
Q ss_pred EECCCCCCCCC----cccccHHHHHHHHhhcCCCcEEEEEcCCCCcChhHHHHHHHHHH
Q psy4592 135 ITDSSDPVGPA----ESLFQASYFELMSRALRPGGIVCSQAGTLWYSLDCVGNTLQHCA 189 (197)
Q Consensus 135 ~~~~~~~~~~~----~~l~~~~~~~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~ 189 (197)
+++.+.++... ..+..+.+++.+.++|||||++++.+.. ......+...+.
T Consensus 110 ~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~----~~~~~~~~~~~~ 164 (218)
T 3dxy_A 110 QLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDW----EPYAEHMLEVMS 164 (218)
T ss_dssp EEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESC----HHHHHHHHHHHH
T ss_pred EEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCC----HHHHHHHHHHHH
Confidence 99877666432 2234467999999999999999997754 233444444444
No 21
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.73 E-value=6.9e-17 Score=122.82 Aligned_cols=113 Identities=14% Similarity=0.137 Sum_probs=90.3
Q ss_pred CCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHh-hcCCceeEEE
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMS-EHQQEFDVII 135 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~D~I~ 135 (197)
++.+|||||||+|.++..+++..+..++++||+++.+++.|+++.... ..++++++++|+.+... ...++||.|+
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~----~~~nv~~~~~d~~~l~~~~~~~~~d~v~ 113 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDS----EAQNVKLLNIDADTLTDVFEPGEVKRVY 113 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHS----CCSSEEEECCCGGGHHHHCCTTSCCEEE
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHc----CCCCEEEEeCCHHHHHhhcCcCCcCEEE
Confidence 456999999999999999988767689999999999999999886542 23579999999987432 2356899999
Q ss_pred ECCCCCCCCC----cccccHHHHHHHHhhcCCCcEEEEEcCC
Q psy4592 136 TDSSDPVGPA----ESLFQASYFELMSRALRPGGIVCSQAGT 173 (197)
Q Consensus 136 ~~~~~~~~~~----~~l~~~~~~~~~~~~LkpgG~l~~~~~~ 173 (197)
++.+.++... ..+....+++++.++|||||.+++.+..
T Consensus 114 ~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~ 155 (213)
T 2fca_A 114 LNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDN 155 (213)
T ss_dssp EESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESC
T ss_pred EECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCC
Confidence 9877665422 2233478999999999999999997643
No 22
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.73 E-value=1.1e-17 Score=130.92 Aligned_cols=132 Identities=15% Similarity=0.167 Sum_probs=95.2
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCC-CCCCCCCeEEEEcchHHHHh------hcC
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMA-VGLSDPRLTVHVGDGFRFMS------EHQ 128 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~d~~~~~~------~~~ 128 (197)
.++.+|||+|||+|.++..+++..+..+++++|+++.+++.|++++.... .+ -..+++++++|+.+..+ ...
T Consensus 35 ~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~-l~~~v~~~~~D~~~~~~~~~~~~~~~ 113 (260)
T 2ozv_A 35 DRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAA-FSARIEVLEADVTLRAKARVEAGLPD 113 (260)
T ss_dssp CSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTT-TGGGEEEEECCTTCCHHHHHHTTCCT
T ss_pred cCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCC-CcceEEEEeCCHHHHhhhhhhhccCC
Confidence 45679999999999999999887666899999999999999999986410 01 12369999999987643 125
Q ss_pred CceeEEEECCCCCCCCC--------------cccccHHHHHHHHhhcCCCcEEEEEcCCCCcChhHHHHHHHHHHhhCC
Q psy4592 129 QEFDVIITDSSDPVGPA--------------ESLFQASYFELMSRALRPGGIVCSQAGTLWYSLDCVGNTLQHCASVFP 193 (197)
Q Consensus 129 ~~~D~I~~~~~~~~~~~--------------~~l~~~~~~~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~f~ 193 (197)
++||+|++|+|...... .......+++.+.++|||||.+++... .+.+..+...+++.|.
T Consensus 114 ~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~-----~~~~~~~~~~l~~~~~ 187 (260)
T 2ozv_A 114 EHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISR-----PQSVAEIIAACGSRFG 187 (260)
T ss_dssp TCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEEC-----GGGHHHHHHHHTTTEE
T ss_pred CCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEc-----HHHHHHHHHHHHhcCC
Confidence 68999999987644310 001126789999999999999988542 2345556666655443
No 23
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.72 E-value=4.9e-17 Score=120.51 Aligned_cols=112 Identities=10% Similarity=0.063 Sum_probs=82.8
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
+++.+|||+|||+|.++..+++. ..+++++|+++++++.|++++... ..++++++++|+.+......++||+|+
T Consensus 21 ~~~~~vLDiGcG~G~~~~~la~~--~~~v~~vD~s~~~l~~a~~~~~~~----~~~~v~~~~~~~~~l~~~~~~~fD~v~ 94 (185)
T 3mti_A 21 DDESIVVDATMGNGNDTAFLAGL--SKKVYAFDVQEQALGKTSQRLSDL----GIENTELILDGHENLDHYVREPIRAAI 94 (185)
T ss_dssp CTTCEEEESCCTTSHHHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHH----TCCCEEEEESCGGGGGGTCCSCEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHc----CCCcEEEEeCcHHHHHhhccCCcCEEE
Confidence 45679999999999999999987 379999999999999999987642 125799999887664333457899999
Q ss_pred ECCC-CCCCCCcc----cccHHHHHHHHhhcCCCcEEEEEcCC
Q psy4592 136 TDSS-DPVGPAES----LFQASYFELMSRALRPGGIVCSQAGT 173 (197)
Q Consensus 136 ~~~~-~~~~~~~~----l~~~~~~~~~~~~LkpgG~l~~~~~~ 173 (197)
+++. .+...... -.....++++.++|||||.+++....
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 137 (185)
T 3mti_A 95 FNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYY 137 (185)
T ss_dssp EEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC-
T ss_pred EeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeC
Confidence 9843 22211000 01246789999999999999987654
No 24
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.72 E-value=1.4e-17 Score=130.29 Aligned_cols=114 Identities=18% Similarity=0.180 Sum_probs=88.8
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
+...+|||||||+|.++..++... .+|+++|+|+.|++.|++ .++++++++|+.+ ++..+++||+|+
T Consensus 38 ~~~~~vLDvGcGtG~~~~~l~~~~--~~v~gvD~s~~ml~~a~~----------~~~v~~~~~~~e~-~~~~~~sfD~v~ 104 (257)
T 4hg2_A 38 PARGDALDCGCGSGQASLGLAEFF--ERVHAVDPGEAQIRQALR----------HPRVTYAVAPAED-TGLPPASVDVAI 104 (257)
T ss_dssp SCSSEEEEESCTTTTTHHHHHTTC--SEEEEEESCHHHHHTCCC----------CTTEEEEECCTTC-CCCCSSCEEEEE
T ss_pred CCCCCEEEEcCCCCHHHHHHHHhC--CEEEEEeCcHHhhhhhhh----------cCCceeehhhhhh-hcccCCcccEEE
Confidence 445699999999999999998775 689999999999987643 2579999999876 345568999999
Q ss_pred ECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEcCCCCcChhHHHHHHHH
Q psy4592 136 TDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQAGTLWYSLDCVGNTLQH 187 (197)
Q Consensus 136 ~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~ 187 (197)
+....|+.. . +.++++++|+|||||+|++.........+.+..+++.
T Consensus 105 ~~~~~h~~~-~----~~~~~e~~rvLkpgG~l~~~~~~~~~~~~~~~~~~~~ 151 (257)
T 4hg2_A 105 AAQAMHWFD-L----DRFWAELRRVARPGAVFAAVTYGLTRVDPEVDAVVDR 151 (257)
T ss_dssp ECSCCTTCC-H----HHHHHHHHHHEEEEEEEEEEEECCCBCCHHHHHHHHH
T ss_pred EeeehhHhh-H----HHHHHHHHHHcCCCCEEEEEECCCCCCCHHHHHHHHH
Confidence 988877763 2 6799999999999999988765433323444444443
No 25
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.72 E-value=7.7e-17 Score=122.38 Aligned_cols=127 Identities=16% Similarity=0.195 Sum_probs=95.5
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHh-hcCCceeEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMS-EHQQEFDVI 134 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~D~I 134 (197)
.++.+|||||||+|.++..+++..+..+++++|+++.+++.|+++.... ..++++++++|+.+... ...++||+|
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~----~~~~v~~~~~d~~~~~~~~~~~~~D~i 115 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEV----GVPNIKLLWVDGSDLTDYFEDGEIDRL 115 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHH----CCSSEEEEECCSSCGGGTSCTTCCSEE
T ss_pred CCCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHc----CCCCEEEEeCCHHHHHhhcCCCCCCEE
Confidence 3457999999999999999988777689999999999999999987542 22589999999887322 235689999
Q ss_pred EECCCCCCCCCc----ccccHHHHHHHHhhcCCCcEEEEEcCCCCcChhHHHHHHHHHHh
Q psy4592 135 ITDSSDPVGPAE----SLFQASYFELMSRALRPGGIVCSQAGTLWYSLDCVGNTLQHCAS 190 (197)
Q Consensus 135 ~~~~~~~~~~~~----~l~~~~~~~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~ 190 (197)
+++++.++.... .+....+++++.++|+|||.+++.+.. ......+.+.+.+
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~----~~~~~~~~~~~~~ 171 (214)
T 1yzh_A 116 YLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDN----RGLFEYSLVSFSQ 171 (214)
T ss_dssp EEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESC----HHHHHHHHHHHHH
T ss_pred EEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCC----HHHHHHHHHHHHH
Confidence 999877653211 123478999999999999999997643 2333444444443
No 26
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.72 E-value=1.5e-16 Score=116.81 Aligned_cols=120 Identities=19% Similarity=0.196 Sum_probs=91.3
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
.++.+|||+|||+|.++..+++..+..+++++|+++.+++.|++++... + ...++ ++.+|+.+.++...++||+|+
T Consensus 24 ~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~--~-~~~~~-~~~~d~~~~~~~~~~~~D~i~ 99 (178)
T 3hm2_A 24 KPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINL--G-VSDRI-AVQQGAPRAFDDVPDNPDVIF 99 (178)
T ss_dssp CTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTT--T-CTTSE-EEECCTTGGGGGCCSCCSEEE
T ss_pred cCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHh--C-CCCCE-EEecchHhhhhccCCCCCEEE
Confidence 4567999999999999999998876689999999999999999987642 1 12378 888998765554347899999
Q ss_pred ECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEcCCCCcChhHHHHHHHHHHhh
Q psy4592 136 TDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQAGTLWYSLDCVGNTLQHCASV 191 (197)
Q Consensus 136 ~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~ 191 (197)
++...+. ..+++++.++|||||.+++.... .+........+++.
T Consensus 100 ~~~~~~~--------~~~l~~~~~~L~~gG~l~~~~~~----~~~~~~~~~~~~~~ 143 (178)
T 3hm2_A 100 IGGGLTA--------PGVFAAAWKRLPVGGRLVANAVT----VESEQMLWALRKQF 143 (178)
T ss_dssp ECC-TTC--------TTHHHHHHHTCCTTCEEEEEECS----HHHHHHHHHHHHHH
T ss_pred ECCcccH--------HHHHHHHHHhcCCCCEEEEEeec----cccHHHHHHHHHHc
Confidence 9886544 35889999999999999986543 24444444555443
No 27
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.71 E-value=2e-17 Score=124.78 Aligned_cols=133 Identities=17% Similarity=0.176 Sum_probs=78.9
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhh---cCCcee
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSE---HQQEFD 132 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~---~~~~~D 132 (197)
.++.+|||+|||+|.++..+++..+..+++++|+++.+++.|++++... ..+++++++|+.+.++. ..++||
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~~~fD 103 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERF-----GAVVDWAAADGIEWLIERAERGRPWH 103 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC------------------------CCHHHHHHHHHHHHHTTCCBS
T ss_pred CCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHh-----CCceEEEEcchHhhhhhhhhccCccc
Confidence 4567999999999999999998766679999999999999999987652 12788999999885543 237899
Q ss_pred EEEECCCCCCCCCccc-----c-----------------cHHHHHHHHhhcCCCcE-EEEEcCCCCcChhHHHHHHHHHH
Q psy4592 133 VIITDSSDPVGPAESL-----F-----------------QASYFELMSRALRPGGI-VCSQAGTLWYSLDCVGNTLQHCA 189 (197)
Q Consensus 133 ~I~~~~~~~~~~~~~l-----~-----------------~~~~~~~~~~~LkpgG~-l~~~~~~~~~~~~~~~~~~~~~~ 189 (197)
+|++|+|.+....... . -..+++++.++|||||+ +++... ....+.+...+..++
T Consensus 104 ~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~--~~~~~~~~~~l~~~~ 181 (215)
T 4dzr_A 104 AIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVG--HNQADEVARLFAPWR 181 (215)
T ss_dssp EEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECT--TSCHHHHHHHTGGGG
T ss_pred EEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEEC--CccHHHHHHHHHHhh
Confidence 9999998644321100 0 05688889999999999 666442 233344444444333
Q ss_pred hhCCcc
Q psy4592 190 SVFPRL 195 (197)
Q Consensus 190 ~~f~~v 195 (197)
..|..+
T Consensus 182 ~gf~~~ 187 (215)
T 4dzr_A 182 ERGFRV 187 (215)
T ss_dssp GGTEEC
T ss_pred cCCceE
Confidence 335433
No 28
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.71 E-value=7.8e-17 Score=124.41 Aligned_cols=118 Identities=13% Similarity=0.122 Sum_probs=87.2
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCC--CCCCCCCeEEEEcchHHHHh--hcCCce
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMA--VGLSDPRLTVHVGDGFRFMS--EHQQEF 131 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~--~~~~~~~~~~~~~d~~~~~~--~~~~~~ 131 (197)
.++.+|||||||+|.++..+++..+...+++||+++.+++.|++++.... ......+++++++|+.+.++ ...++|
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~ 124 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQL 124 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCE
T ss_pred CCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCe
Confidence 34568999999999999999987777899999999999999987643100 00023589999999987454 245789
Q ss_pred eEEEECCCCCCCC----CcccccHHHHHHHHhhcCCCcEEEEEcCC
Q psy4592 132 DVIITDSSDPVGP----AESLFQASYFELMSRALRPGGIVCSQAGT 173 (197)
Q Consensus 132 D~I~~~~~~~~~~----~~~l~~~~~~~~~~~~LkpgG~l~~~~~~ 173 (197)
|.|+++.+.++.. ...+....+++++.++|||||.|++.+..
T Consensus 125 D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~ 170 (235)
T 3ckk_A 125 TKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDV 170 (235)
T ss_dssp EEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEESC
T ss_pred eEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCC
Confidence 9999987765532 12233468999999999999999997644
No 29
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.70 E-value=8.2e-17 Score=121.21 Aligned_cols=120 Identities=13% Similarity=0.165 Sum_probs=94.4
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
.++.+|||+|||+|.++..+++..+..+++++|+++++++.|++++... ..++++++.+|+.+.+.. .++||+|+
T Consensus 39 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~----~~~~v~~~~~d~~~~~~~-~~~~D~i~ 113 (204)
T 3e05_A 39 QDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKF----VARNVTLVEAFAPEGLDD-LPDPDRVF 113 (204)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHH----TCTTEEEEECCTTTTCTT-SCCCSEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHh----CCCcEEEEeCChhhhhhc-CCCCCEEE
Confidence 5667999999999999999998776789999999999999999987542 225799999998664443 36799999
Q ss_pred ECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEcCCCCcChhHHHHHHHHHHhh
Q psy4592 136 TDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQAGTLWYSLDCVGNTLQHCASV 191 (197)
Q Consensus 136 ~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~ 191 (197)
++...+ . ...+++++.++|||||.+++.... .+....+.+.+++.
T Consensus 114 ~~~~~~---~----~~~~l~~~~~~LkpgG~l~~~~~~----~~~~~~~~~~l~~~ 158 (204)
T 3e05_A 114 IGGSGG---M----LEEIIDAVDRRLKSEGVIVLNAVT----LDTLTKAVEFLEDH 158 (204)
T ss_dssp ESCCTT---C----HHHHHHHHHHHCCTTCEEEEEECB----HHHHHHHHHHHHHT
T ss_pred ECCCCc---C----HHHHHHHHHHhcCCCeEEEEEecc----cccHHHHHHHHHHC
Confidence 988653 1 278999999999999999996433 34555555555544
No 30
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.70 E-value=7.2e-17 Score=119.71 Aligned_cols=128 Identities=18% Similarity=0.238 Sum_probs=95.8
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
.++.+|||+|||+|.++..+++. ..+++++|+++.+++.+++++... +....+++++.+|+.+... .++||+|+
T Consensus 51 ~~~~~vLdiG~G~G~~~~~~~~~--~~~v~~~D~~~~~~~~a~~~~~~~--~~~~~~~~~~~~d~~~~~~--~~~~D~v~ 124 (194)
T 1dus_A 51 DKDDDILDLGCGYGVIGIALADE--VKSTTMADINRRAIKLAKENIKLN--NLDNYDIRVVHSDLYENVK--DRKYNKII 124 (194)
T ss_dssp CTTCEEEEETCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHHHHHT--TCTTSCEEEEECSTTTTCT--TSCEEEEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHHHc--CCCccceEEEECchhcccc--cCCceEEE
Confidence 46679999999999999998877 379999999999999999987542 1111149999999876433 46899999
Q ss_pred ECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEcCCCCcChhHHHHHHHHHHhhCCccc
Q psy4592 136 TDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQAGTLWYSLDCVGNTLQHCASVFPRLH 196 (197)
Q Consensus 136 ~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~f~~v~ 196 (197)
++++.++.... ...+++++.++|+|||.+++..... .....+.+.+++.|..+.
T Consensus 125 ~~~~~~~~~~~---~~~~l~~~~~~L~~gG~l~~~~~~~----~~~~~~~~~l~~~~~~~~ 178 (194)
T 1dus_A 125 TNPPIRAGKEV---LHRIIEEGKELLKDNGEIWVVIQTK----QGAKSLAKYMKDVFGNVE 178 (194)
T ss_dssp ECCCSTTCHHH---HHHHHHHHHHHEEEEEEEEEEEEST----HHHHHHHHHHHHHHSCCE
T ss_pred ECCCcccchhH---HHHHHHHHHHHcCCCCEEEEEECCC----CChHHHHHHHHHHhcceE
Confidence 99876643211 2679999999999999999976442 334445566666665543
No 31
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.70 E-value=3.6e-17 Score=125.21 Aligned_cols=103 Identities=14% Similarity=0.175 Sum_probs=84.5
Q ss_pred CeEEEEeCCchHhHHHHhcCC-CCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhc-CCceeEEEE
Q psy4592 59 KKVLIVGGGDGGVAREVLKHP-SVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEH-QQEFDVIIT 136 (197)
Q Consensus 59 ~~vLdiG~G~G~~~~~l~~~~-~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~~~D~I~~ 136 (197)
.+|||||||+|..+..+++.. +..+++++|+++++++.|++++... ++..++++++++|+.+.++.. .++||+|++
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~--g~~~~~i~~~~gda~~~l~~~~~~~fD~V~~ 135 (221)
T 3dr5_A 58 TGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREA--GYSPSRVRFLLSRPLDVMSRLANDSYQLVFG 135 (221)
T ss_dssp CEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHT--TCCGGGEEEECSCHHHHGGGSCTTCEEEEEE
T ss_pred CCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc--CCCcCcEEEEEcCHHHHHHHhcCCCcCeEEE
Confidence 499999999999999998753 3579999999999999999987652 222258999999999887654 579999999
Q ss_pred CCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEE
Q psy4592 137 DSSDPVGPAESLFQASYFELMSRALRPGGIVCSQ 170 (197)
Q Consensus 137 ~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~ 170 (197)
+.... . ...+++.+.++|||||++++.
T Consensus 136 d~~~~---~----~~~~l~~~~~~LkpGG~lv~d 162 (221)
T 3dr5_A 136 QVSPM---D----LKALVDAAWPLLRRGGALVLA 162 (221)
T ss_dssp CCCTT---T----HHHHHHHHHHHEEEEEEEEET
T ss_pred cCcHH---H----HHHHHHHHHHHcCCCcEEEEe
Confidence 87421 1 167999999999999999984
No 32
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.70 E-value=1.2e-16 Score=124.88 Aligned_cols=111 Identities=14% Similarity=0.166 Sum_probs=85.4
Q ss_pred CCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhh-cCCceeEEE
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSE-HQQEFDVII 135 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~~~D~I~ 135 (197)
++.+|||+|||+|.++..+++..+ .+++++|+++.+++.|++++... ++ ..+++++++|+.+.... ..++||+|+
T Consensus 49 ~~~~vLDlG~G~G~~~~~la~~~~-~~v~gvDi~~~~~~~a~~n~~~~--~~-~~~v~~~~~D~~~~~~~~~~~~fD~Ii 124 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLLSTRTK-AKIVGVEIQERLADMAKRSVAYN--QL-EDQIEIIEYDLKKITDLIPKERADIVT 124 (259)
T ss_dssp SCCEEEETTCTTTHHHHHHHTTCC-CEEEEECCSHHHHHHHHHHHHHT--TC-TTTEEEECSCGGGGGGTSCTTCEEEEE
T ss_pred CCCEEEEcCCchhHHHHHHHHhcC-CcEEEEECCHHHHHHHHHHHHHC--CC-cccEEEEECcHHHhhhhhccCCccEEE
Confidence 567999999999999999998865 49999999999999999987642 11 24799999999886542 257899999
Q ss_pred ECCCCCCCCCcc----------------cccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 136 TDSSDPVGPAES----------------LFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 136 ~~~~~~~~~~~~----------------l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
+|+|........ .....+++.+.++|||||++++..
T Consensus 125 ~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 176 (259)
T 3lpm_A 125 CNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVH 176 (259)
T ss_dssp ECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEE
Confidence 999864320000 011469999999999999999853
No 33
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.69 E-value=7.8e-17 Score=123.99 Aligned_cols=105 Identities=17% Similarity=0.310 Sum_probs=86.6
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHh-hcCCceeEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMS-EHQQEFDVI 134 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~D~I 134 (197)
.++.+|||||||+|..+..+++..+..+++++|+++.+++.|++++... + ..++++++.+|+.+.++ ...++||+|
T Consensus 70 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~--~-~~~~v~~~~~d~~~~~~~~~~~~fD~V 146 (232)
T 3ntv_A 70 NNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATY--H-FENQVRIIEGNALEQFENVNDKVYDMI 146 (232)
T ss_dssp HTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHT--T-CTTTEEEEESCGGGCHHHHTTSCEEEE
T ss_pred cCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc--C-CCCcEEEEECCHHHHHHhhccCCccEE
Confidence 3567999999999999999998666689999999999999999987642 1 12489999999988766 445789999
Q ss_pred EECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEE
Q psy4592 135 ITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQ 170 (197)
Q Consensus 135 ~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~ 170 (197)
+++.... . ...+++.+.++|||||++++.
T Consensus 147 ~~~~~~~---~----~~~~l~~~~~~LkpgG~lv~d 175 (232)
T 3ntv_A 147 FIDAAKA---Q----SKKFFEIYTPLLKHQGLVITD 175 (232)
T ss_dssp EEETTSS---S----HHHHHHHHGGGEEEEEEEEEE
T ss_pred EEcCcHH---H----HHHHHHHHHHhcCCCeEEEEe
Confidence 9986421 1 267999999999999999884
No 34
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.69 E-value=7.6e-17 Score=126.23 Aligned_cols=107 Identities=16% Similarity=0.162 Sum_probs=87.5
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
+++.+|||||||+|.++..+++. +..+++++|+++.+++.|++++... + ..++++++++|+.+. +...++||+|+
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gvD~s~~~~~~a~~~~~~~--~-~~~~v~~~~~d~~~~-~~~~~~fD~i~ 119 (267)
T 3kkz_A 45 TEKSLIADIGCGTGGQTMVLAGH-VTGQVTGLDFLSGFIDIFNRNARQS--G-LQNRVTGIVGSMDDL-PFRNEELDLIW 119 (267)
T ss_dssp CTTCEEEEETCTTCHHHHHHHTT-CSSEEEEEESCHHHHHHHHHHHHHT--T-CTTTEEEEECCTTSC-CCCTTCEEEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHhc-cCCEEEEEeCCHHHHHHHHHHHHHc--C-CCcCcEEEEcChhhC-CCCCCCEEEEE
Confidence 45689999999999999999988 5579999999999999999886542 1 235799999998653 33457899999
Q ss_pred ECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEcC
Q psy4592 136 TDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQAG 172 (197)
Q Consensus 136 ~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~~ 172 (197)
+....++. +. ..+++++.++|||||++++...
T Consensus 120 ~~~~~~~~-~~----~~~l~~~~~~LkpgG~l~~~~~ 151 (267)
T 3kkz_A 120 SEGAIYNI-GF----ERGLNEWRKYLKKGGYLAVSEC 151 (267)
T ss_dssp ESSCGGGT-CH----HHHHHHHGGGEEEEEEEEEEEE
T ss_pred EcCCceec-CH----HHHHHHHHHHcCCCCEEEEEEe
Confidence 98876555 32 7899999999999999998753
No 35
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.69 E-value=1.9e-16 Score=123.11 Aligned_cols=106 Identities=22% Similarity=0.351 Sum_probs=86.4
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCC-CccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcC--Ccee
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPS-VESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQ--QEFD 132 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~-~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~--~~~D 132 (197)
.++.+|||||||+|..+..+++..+ ..+++++|+++.+++.|++++... + ..++++++.+|+.+.++... ++||
T Consensus 62 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~--g-~~~~v~~~~~d~~~~l~~~~~~~~fD 138 (248)
T 3tfw_A 62 TQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLA--G-VDQRVTLREGPALQSLESLGECPAFD 138 (248)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHT--T-CTTTEEEEESCHHHHHHTCCSCCCCS
T ss_pred cCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc--C-CCCcEEEEEcCHHHHHHhcCCCCCeE
Confidence 3567999999999999999998765 689999999999999999987542 1 12489999999998777543 4899
Q ss_pred EEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 133 VIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 133 ~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
+|+++... .. ...+++.+.++|||||++++..
T Consensus 139 ~V~~d~~~---~~----~~~~l~~~~~~LkpGG~lv~~~ 170 (248)
T 3tfw_A 139 LIFIDADK---PN----NPHYLRWALRYSRPGTLIIGDN 170 (248)
T ss_dssp EEEECSCG---GG----HHHHHHHHHHTCCTTCEEEEEC
T ss_pred EEEECCch---HH----HHHHHHHHHHhcCCCeEEEEeC
Confidence 99998741 11 2679999999999999999863
No 36
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.69 E-value=2.2e-17 Score=124.67 Aligned_cols=111 Identities=12% Similarity=0.063 Sum_probs=81.6
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCC----C----CCCCCeEEEEcchHHHHhhc
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAV----G----LSDPRLTVHVGDGFRFMSEH 127 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~----~----~~~~~~~~~~~d~~~~~~~~ 127 (197)
+++.+|||+|||+|..+..+++.+ .+|++||+|+.|++.|+++...... + ...++++++++|+.+.....
T Consensus 21 ~~~~~vLD~GCG~G~~~~~la~~g--~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~ 98 (203)
T 1pjz_A 21 VPGARVLVPLCGKSQDMSWLSGQG--YHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARD 98 (203)
T ss_dssp CTTCEEEETTTCCSHHHHHHHHHC--CEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHH
T ss_pred CCCCEEEEeCCCCcHhHHHHHHCC--CeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCccc
Confidence 466799999999999999988763 6999999999999999987542000 0 01357999999987643221
Q ss_pred CCceeEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEE
Q psy4592 128 QQEFDVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQ 170 (197)
Q Consensus 128 ~~~~D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~ 170 (197)
.++||+|++....++.+... ...++++++++|||||++++.
T Consensus 99 ~~~fD~v~~~~~l~~l~~~~--~~~~l~~~~r~LkpgG~~~l~ 139 (203)
T 1pjz_A 99 IGHCAAFYDRAAMIALPADM--RERYVQHLEALMPQACSGLLI 139 (203)
T ss_dssp HHSEEEEEEESCGGGSCHHH--HHHHHHHHHHHSCSEEEEEEE
T ss_pred CCCEEEEEECcchhhCCHHH--HHHHHHHHHHHcCCCcEEEEE
Confidence 26899999877655443221 256899999999999984433
No 37
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.69 E-value=1.1e-16 Score=124.27 Aligned_cols=106 Identities=15% Similarity=0.145 Sum_probs=86.8
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
+++.+|||+|||+|.++..+++..+ .+++++|+++.+++.+++++... + ...+++++++|+.+ ++...++||+|+
T Consensus 45 ~~~~~vLDiG~G~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~~--~-~~~~~~~~~~d~~~-~~~~~~~fD~v~ 119 (257)
T 3f4k_A 45 TDDAKIADIGCGTGGQTLFLADYVK-GQITGIDLFPDFIEIFNENAVKA--N-CADRVKGITGSMDN-LPFQNEELDLIW 119 (257)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHCC-SEEEEEESCHHHHHHHHHHHHHT--T-CTTTEEEEECCTTS-CSSCTTCEEEEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHhCC-CeEEEEECCHHHHHHHHHHHHHc--C-CCCceEEEECChhh-CCCCCCCEEEEE
Confidence 4557999999999999999998765 49999999999999999886542 1 12469999999855 333457999999
Q ss_pred ECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 136 TDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 136 ~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
++...++. +. ..+++++.++|||||++++..
T Consensus 120 ~~~~l~~~-~~----~~~l~~~~~~L~pgG~l~~~~ 150 (257)
T 3f4k_A 120 SEGAIYNI-GF----ERGMNEWSKYLKKGGFIAVSE 150 (257)
T ss_dssp EESCSCCC-CH----HHHHHHHHTTEEEEEEEEEEE
T ss_pred ecChHhhc-CH----HHHHHHHHHHcCCCcEEEEEE
Confidence 99877665 32 789999999999999999875
No 38
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.68 E-value=8.3e-17 Score=121.28 Aligned_cols=110 Identities=20% Similarity=0.293 Sum_probs=85.0
Q ss_pred CCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhh-cCCc-eeEE
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSE-HQQE-FDVI 134 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~~-~D~I 134 (197)
++.+|||+|||+|.++..++.... .+++++|+|+++++.|++++... ++..++++++++|+.++++. ..++ ||+|
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~~-~~v~gvD~s~~~l~~a~~~~~~~--~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I 129 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQA-KKVTFLELDKTVANQLKKNLQTL--KCSSEQAEVINQSSLDFLKQPQNQPHFDVV 129 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTC-SEEEEECSCHHHHHHHHHHHHHT--TCCTTTEEEECSCHHHHTTSCCSSCCEEEE
T ss_pred CCCeEEEcCCccCHHHHHHHHccC-CEEEEEECCHHHHHHHHHHHHHh--CCCccceEEEECCHHHHHHhhccCCCCCEE
Confidence 457999999999999998776643 68999999999999999987642 11115899999999886543 2468 9999
Q ss_pred EECCCCCCCCCcccccHHHHHHH--HhhcCCCcEEEEEcCCC
Q psy4592 135 ITDSSDPVGPAESLFQASYFELM--SRALRPGGIVCSQAGTL 174 (197)
Q Consensus 135 ~~~~~~~~~~~~~l~~~~~~~~~--~~~LkpgG~l~~~~~~~ 174 (197)
+++++.+.. . ..++++.+ .++|+|||.+++.....
T Consensus 130 ~~~~~~~~~-~----~~~~l~~~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 130 FLDPPFHFN-L----AEQAISLLCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp EECCCSSSC-H----HHHHHHHHHHTTCEEEEEEEEEEEESS
T ss_pred EECCCCCCc-c----HHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 999984421 1 25678888 67899999999876543
No 39
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.68 E-value=5.2e-17 Score=124.35 Aligned_cols=127 Identities=17% Similarity=0.156 Sum_probs=92.2
Q ss_pred CCCCeEEEEeCC-chHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEE
Q psy4592 56 PNPKKVLIVGGG-DGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVI 134 (197)
Q Consensus 56 ~~~~~vLdiG~G-~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I 134 (197)
+++.+|||+||| +|.++..+++.. ..+++++|+++.+++.|++++... ..+++++++|+........++||+|
T Consensus 54 ~~~~~vLDlG~G~~G~~~~~la~~~-~~~v~~vD~s~~~~~~a~~~~~~~-----~~~v~~~~~d~~~~~~~~~~~fD~I 127 (230)
T 3evz_A 54 RGGEVALEIGTGHTAMMALMAEKFF-NCKVTATEVDEEFFEYARRNIERN-----NSNVRLVKSNGGIIKGVVEGTFDVI 127 (230)
T ss_dssp CSSCEEEEECCTTTCHHHHHHHHHH-CCEEEEEECCHHHHHHHHHHHHHT-----TCCCEEEECSSCSSTTTCCSCEEEE
T ss_pred CCCCEEEEcCCCHHHHHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHh-----CCCcEEEeCCchhhhhcccCceeEE
Confidence 466899999999 999999988764 379999999999999999987652 2279999999643323334789999
Q ss_pred EECCCCCCCCCccc---------------ccHHHHHHHHhhcCCCcEEEEEcCCCCcChhHHHHHHHHHHhh
Q psy4592 135 ITDSSDPVGPAESL---------------FQASYFELMSRALRPGGIVCSQAGTLWYSLDCVGNTLQHCASV 191 (197)
Q Consensus 135 ~~~~~~~~~~~~~l---------------~~~~~~~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~ 191 (197)
+++++.+....... ....+++++.++|||||.+++..... ......+.+.+++.
T Consensus 128 ~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~---~~~~~~~~~~l~~~ 196 (230)
T 3evz_A 128 FSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDK---EKLLNVIKERGIKL 196 (230)
T ss_dssp EECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESC---HHHHHHHHHHHHHT
T ss_pred EECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEeccc---HhHHHHHHHHHHHc
Confidence 99998654322110 01678999999999999999865331 24455555555544
No 40
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.68 E-value=1.2e-16 Score=123.01 Aligned_cols=109 Identities=19% Similarity=0.206 Sum_probs=83.0
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHh-hcCCceeEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMS-EHQQEFDVI 134 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~D~I 134 (197)
.++.+|||||||+|.++..+++... .+++++|+++.+++.|+++... ...+++++++|+.+... ...++||+|
T Consensus 59 ~~~~~vLDiGcGtG~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~-----~~~~v~~~~~d~~~~~~~~~~~~fD~V 132 (236)
T 1zx0_A 59 SKGGRVLEVGFGMAIAASKVQEAPI-DEHWIIECNDGVFQRLRDWAPR-----QTHKVIPLKGLWEDVAPTLPDGHFDGI 132 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHHTSCE-EEEEEEECCHHHHHHHHHHGGG-----CSSEEEEEESCHHHHGGGSCTTCEEEE
T ss_pred CCCCeEEEEeccCCHHHHHHHhcCC-CeEEEEcCCHHHHHHHHHHHHh-----cCCCeEEEecCHHHhhcccCCCceEEE
Confidence 4567999999999999999876543 5999999999999999998764 23579999999988543 345789999
Q ss_pred EECCCCCCCCCcccc-cHHHHHHHHhhcCCCcEEEEE
Q psy4592 135 ITDSSDPVGPAESLF-QASYFELMSRALRPGGIVCSQ 170 (197)
Q Consensus 135 ~~~~~~~~~~~~~l~-~~~~~~~~~~~LkpgG~l~~~ 170 (197)
+++......+..+.. .+.++++++++|||||+|++.
T Consensus 133 ~~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~ 169 (236)
T 1zx0_A 133 LYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp EECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred EECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEE
Confidence 995332121111111 146799999999999999874
No 41
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.68 E-value=1.3e-16 Score=120.69 Aligned_cols=106 Identities=19% Similarity=0.253 Sum_probs=86.5
Q ss_pred CCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEEE
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVIIT 136 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~~ 136 (197)
++.+|||+|||+|.++..+++. +..+++++|+++.+++.|++++... + ..++++++++|+.+ ++...++||+|++
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~~--~-~~~~~~~~~~d~~~-~~~~~~~~D~v~~ 117 (219)
T 3dlc_A 43 TAGTCIDIGSGPGALSIALAKQ-SDFSIRALDFSKHMNEIALKNIADA--N-LNDRIQIVQGDVHN-IPIEDNYADLIVS 117 (219)
T ss_dssp CEEEEEEETCTTSHHHHHHHHH-SEEEEEEEESCHHHHHHHHHHHHHT--T-CTTTEEEEECBTTB-CSSCTTCEEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHhc--c-ccCceEEEEcCHHH-CCCCcccccEEEE
Confidence 3349999999999999998877 4479999999999999999986542 1 23589999999866 2334578999999
Q ss_pred CCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 137 DSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 137 ~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
+...++.++. ..++++++++|||||.+++..
T Consensus 118 ~~~l~~~~~~----~~~l~~~~~~L~pgG~l~~~~ 148 (219)
T 3dlc_A 118 RGSVFFWEDV----ATAFREIYRILKSGGKTYIGG 148 (219)
T ss_dssp ESCGGGCSCH----HHHHHHHHHHEEEEEEEEEEE
T ss_pred CchHhhccCH----HHHHHHHHHhCCCCCEEEEEe
Confidence 8877665444 789999999999999999864
No 42
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.68 E-value=2.1e-16 Score=119.11 Aligned_cols=107 Identities=17% Similarity=0.233 Sum_probs=84.8
Q ss_pred CCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEEE
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVIIT 136 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~~ 136 (197)
++.+|||+|||+|.++..+++... .+++++|+++.+++.|++++... ..++++++++|+.++++...++||+|++
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~~-~~V~~vD~s~~~l~~a~~~~~~~----~~~~v~~~~~D~~~~~~~~~~~fD~V~~ 128 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRYA-AGATLIEMDRAVSQQLIKNLATL----KAGNARVVNSNAMSFLAQKGTPHNIVFV 128 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTC-SEEEEECSCHHHHHHHHHHHHHT----TCCSEEEECSCHHHHHSSCCCCEEEEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHhcCC-CEEEEEECCHHHHHHHHHHHHHc----CCCcEEEEECCHHHHHhhcCCCCCEEEE
Confidence 457999999999999998776643 59999999999999999987642 1258999999998877655578999999
Q ss_pred CCCCCCCCCcccccHHHHHHHHh--hcCCCcEEEEEcCC
Q psy4592 137 DSSDPVGPAESLFQASYFELMSR--ALRPGGIVCSQAGT 173 (197)
Q Consensus 137 ~~~~~~~~~~~l~~~~~~~~~~~--~LkpgG~l~~~~~~ 173 (197)
+++.+.. . ..++++.+.+ +|+|||++++....
T Consensus 129 ~~p~~~~-~----~~~~l~~l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 129 DPPFRRG-L----LEETINLLEDNGWLADEALIYVESEV 162 (202)
T ss_dssp CCSSSTT-T----HHHHHHHHHHTTCEEEEEEEEEEEEG
T ss_pred CCCCCCC-c----HHHHHHHHHhcCccCCCcEEEEEECC
Confidence 9985422 1 2567777765 59999999987643
No 43
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.68 E-value=2.1e-16 Score=120.58 Aligned_cols=108 Identities=17% Similarity=0.198 Sum_probs=83.7
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCC-CCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcC-----C
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHP-SVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQ-----Q 129 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~-~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-----~ 129 (197)
.++.+|||||||+|..+..+++.. +..+++++|+++.+++.|++++... + ..++++++++|+.+.++... +
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~--~-~~~~v~~~~~d~~~~l~~~~~~~~~~ 133 (221)
T 3u81_A 57 YSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFA--G-LQDKVTILNGASQDLIPQLKKKYDVD 133 (221)
T ss_dssp HCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHH--T-CGGGEEEEESCHHHHGGGTTTTSCCC
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHc--C-CCCceEEEECCHHHHHHHHHHhcCCC
Confidence 356799999999999999999854 3579999999999999999987542 1 12479999999988766533 6
Q ss_pred ceeEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 130 EFDVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 130 ~~D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
+||+|+++...+.... ..++++.+ ++|||||++++..
T Consensus 134 ~fD~V~~d~~~~~~~~----~~~~~~~~-~~LkpgG~lv~~~ 170 (221)
T 3u81_A 134 TLDMVFLDHWKDRYLP----DTLLLEKC-GLLRKGTVLLADN 170 (221)
T ss_dssp CCSEEEECSCGGGHHH----HHHHHHHT-TCCCTTCEEEESC
T ss_pred ceEEEEEcCCcccchH----HHHHHHhc-cccCCCeEEEEeC
Confidence 8999999875332211 13566667 9999999999854
No 44
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.67 E-value=1.4e-16 Score=124.21 Aligned_cols=111 Identities=14% Similarity=0.007 Sum_probs=83.9
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCC-------C-CC-----CCCCCeEEEEcchHH
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGM-------A-VG-----LSDPRLTVHVGDGFR 122 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~-------~-~~-----~~~~~~~~~~~d~~~ 122 (197)
.++.+|||+|||+|..+..+++.+ .+|++||+|+.+++.|++..... . ++ -...+++++++|+.+
T Consensus 67 ~~~~~vLD~GCG~G~~~~~La~~G--~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~ 144 (252)
T 2gb4_A 67 QSGLRVFFPLCGKAIEMKWFADRG--HTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFD 144 (252)
T ss_dssp CCSCEEEETTCTTCTHHHHHHHTT--CEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTT
T ss_pred CCCCeEEEeCCCCcHHHHHHHHCC--CeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECcccc
Confidence 356799999999999999998874 69999999999999998765310 0 00 013589999999987
Q ss_pred HHhhcCCceeEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEE
Q psy4592 123 FMSEHQQEFDVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQ 170 (197)
Q Consensus 123 ~~~~~~~~~D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~ 170 (197)
......++||+|++....+..+... ...+++++.++|||||++++.
T Consensus 145 l~~~~~~~FD~V~~~~~l~~l~~~~--~~~~l~~~~~~LkpGG~l~l~ 190 (252)
T 2gb4_A 145 LPRANIGKFDRIWDRGALVAINPGD--HDRYADIILSLLRKEFQYLVA 190 (252)
T ss_dssp GGGGCCCCEEEEEESSSTTTSCGGG--HHHHHHHHHHTEEEEEEEEEE
T ss_pred CCcccCCCEEEEEEhhhhhhCCHHH--HHHHHHHHHHHcCCCeEEEEE
Confidence 4332237999999987765554321 267999999999999998643
No 45
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.67 E-value=2.8e-16 Score=120.46 Aligned_cols=106 Identities=15% Similarity=0.282 Sum_probs=87.2
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
.++.+|||+|||+|.++..+++..+..+++++|+++.+++.|++++.. ..+++++++|+.+.. . .++||+|+
T Consensus 43 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~------~~~~~~~~~d~~~~~-~-~~~fD~v~ 114 (234)
T 3dtn_A 43 TENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRG------NLKVKYIEADYSKYD-F-EEKYDMVV 114 (234)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCS------CTTEEEEESCTTTCC-C-CSCEEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhcc------CCCEEEEeCchhccC-C-CCCceEEE
Confidence 456899999999999999998876668999999999999999998764 238999999987632 2 27899999
Q ss_pred ECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 136 TDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 136 ~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
+....++.++.. ...++++++++|||||.+++..
T Consensus 115 ~~~~l~~~~~~~--~~~~l~~~~~~LkpgG~l~~~~ 148 (234)
T 3dtn_A 115 SALSIHHLEDED--KKELYKRSYSILKESGIFINAD 148 (234)
T ss_dssp EESCGGGSCHHH--HHHHHHHHHHHEEEEEEEEEEE
T ss_pred EeCccccCCHHH--HHHHHHHHHHhcCCCcEEEEEE
Confidence 998766654331 1358999999999999999865
No 46
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.67 E-value=3.7e-16 Score=119.14 Aligned_cols=106 Identities=17% Similarity=0.292 Sum_probs=85.6
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCC-CccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhc----CCc
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPS-VESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEH----QQE 130 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~-~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~----~~~ 130 (197)
.++.+|||||||+|..+..+++..+ ..+++++|+++.+++.|++++... + ..++++++++|+.+.++.. .++
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~--~-~~~~v~~~~~d~~~~~~~~~~~~~~~ 133 (223)
T 3duw_A 57 QGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERA--N-LNDRVEVRTGLALDSLQQIENEKYEP 133 (223)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHT--T-CTTTEEEEESCHHHHHHHHHHTTCCC
T ss_pred hCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc--C-CCCcEEEEEcCHHHHHHHHHhcCCCC
Confidence 3567999999999999999998765 579999999999999999987642 1 2246999999998865541 267
Q ss_pred eeEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 131 FDVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 131 ~D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
||+|+++.+.+ ....+++.+.++|+|||++++..
T Consensus 134 fD~v~~d~~~~-------~~~~~l~~~~~~L~pgG~lv~~~ 167 (223)
T 3duw_A 134 FDFIFIDADKQ-------NNPAYFEWALKLSRPGTVIIGDN 167 (223)
T ss_dssp CSEEEECSCGG-------GHHHHHHHHHHTCCTTCEEEEES
T ss_pred cCEEEEcCCcH-------HHHHHHHHHHHhcCCCcEEEEeC
Confidence 99999987521 12679999999999999998853
No 47
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.67 E-value=7.6e-16 Score=116.32 Aligned_cols=117 Identities=21% Similarity=0.223 Sum_probs=90.9
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
.++.+|||+|||+|.++..+++. ..+++++|+++++++.|+++.... + ...+++++.+|+.+.++. .++||+|+
T Consensus 54 ~~~~~vLDlGcG~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~~~~~~--g-~~~~v~~~~~d~~~~~~~-~~~~D~v~ 127 (204)
T 3njr_A 54 RRGELLWDIGGGSGSVSVEWCLA--GGRAITIEPRADRIENIQKNIDTY--G-LSPRMRAVQGTAPAALAD-LPLPEAVF 127 (204)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHT--T-CTTTEEEEESCTTGGGTT-SCCCSEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHc--C-CCCCEEEEeCchhhhccc-CCCCCEEE
Confidence 45679999999999999999887 379999999999999999987542 1 123799999998875443 35799999
Q ss_pred ECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEcCCCCcChhHHHHHHHHHHhh
Q psy4592 136 TDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQAGTLWYSLDCVGNTLQHCASV 191 (197)
Q Consensus 136 ~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~ 191 (197)
++... + .+ +++++.+.|||||++++.... .+.+..+.+.+++.
T Consensus 128 ~~~~~----~----~~-~l~~~~~~LkpgG~lv~~~~~----~~~~~~~~~~l~~~ 170 (204)
T 3njr_A 128 IGGGG----S----QA-LYDRLWEWLAPGTRIVANAVT----LESETLLTQLHARH 170 (204)
T ss_dssp ECSCC----C----HH-HHHHHHHHSCTTCEEEEEECS----HHHHHHHHHHHHHH
T ss_pred ECCcc----c----HH-HHHHHHHhcCCCcEEEEEecC----cccHHHHHHHHHhC
Confidence 87732 1 24 999999999999999997644 45566666666544
No 48
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.67 E-value=2e-16 Score=118.32 Aligned_cols=115 Identities=13% Similarity=0.088 Sum_probs=87.3
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCC-CCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHP-SVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVI 134 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~-~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I 134 (197)
+++.+|||+|||+|.++..+++.. +..+++++|+++.+++.|++++... + ..++++++++|+.+......++||+|
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~--~-~~~~v~~~~~d~~~~~~~~~~~fD~v 97 (197)
T 3eey_A 21 KEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDL--N-LIDRVTLIKDGHQNMDKYIDCPVKAV 97 (197)
T ss_dssp CTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHT--T-CGGGEEEECSCGGGGGGTCCSCEEEE
T ss_pred CCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc--C-CCCCeEEEECCHHHHhhhccCCceEE
Confidence 456799999999999999988763 4469999999999999999987642 1 12589999999877654445789999
Q ss_pred EECCCC-CCCCCccc----ccHHHHHHHHhhcCCCcEEEEEcCC
Q psy4592 135 ITDSSD-PVGPAESL----FQASYFELMSRALRPGGIVCSQAGT 173 (197)
Q Consensus 135 ~~~~~~-~~~~~~~l----~~~~~~~~~~~~LkpgG~l~~~~~~ 173 (197)
+++++. +....... ...++++++.++|||||++++....
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~ 141 (197)
T 3eey_A 98 MFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYY 141 (197)
T ss_dssp EEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred EEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEcc
Confidence 999764 21111000 1246999999999999999987643
No 49
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.67 E-value=3.1e-16 Score=121.92 Aligned_cols=105 Identities=15% Similarity=0.254 Sum_probs=85.5
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCC-CccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhc------C
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPS-VESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEH------Q 128 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~-~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~------~ 128 (197)
.++++|||||||+|..+..+++..+ ..+++++|+++.+++.|++++... ++ .++++++.+|+.+.++.. .
T Consensus 78 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~--g~-~~~i~~~~gda~~~l~~l~~~~~~~ 154 (247)
T 1sui_A 78 INAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKA--GV-DHKIDFREGPALPVLDEMIKDEKNH 154 (247)
T ss_dssp TTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHT--TC-GGGEEEEESCHHHHHHHHHHSGGGT
T ss_pred hCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc--CC-CCCeEEEECCHHHHHHHHHhccCCC
Confidence 3567999999999999999887644 579999999999999999987642 12 257999999998876542 4
Q ss_pred CceeEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEE
Q psy4592 129 QEFDVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQ 170 (197)
Q Consensus 129 ~~~D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~ 170 (197)
++||+|+++... .. ...+++.+.++|||||++++.
T Consensus 155 ~~fD~V~~d~~~---~~----~~~~l~~~~~~LkpGG~lv~d 189 (247)
T 1sui_A 155 GSYDFIFVDADK---DN----YLNYHKRLIDLVKVGGVIGYD 189 (247)
T ss_dssp TCBSEEEECSCS---TT----HHHHHHHHHHHBCTTCCEEEE
T ss_pred CCEEEEEEcCch---HH----HHHHHHHHHHhCCCCeEEEEe
Confidence 789999998742 11 277999999999999999875
No 50
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.67 E-value=1.2e-16 Score=117.59 Aligned_cols=109 Identities=19% Similarity=0.223 Sum_probs=86.5
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
.++.+|||+|||+|.++..+++. +..+++++|+++.+++.|++++... ++ .++++++.+|+.+.++...++||+|+
T Consensus 30 ~~~~~vLDlGcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~~--~~-~~~~~~~~~d~~~~~~~~~~~fD~i~ 105 (177)
T 2esr_A 30 FNGGRVLDLFAGSGGLAIEAVSR-GMSAAVLVEKNRKAQAIIQDNIIMT--KA-ENRFTLLKMEAERAIDCLTGRFDLVF 105 (177)
T ss_dssp CCSCEEEEETCTTCHHHHHHHHT-TCCEEEEECCCHHHHHHHHHHHHTT--TC-GGGEEEECSCHHHHHHHBCSCEEEEE
T ss_pred cCCCeEEEeCCCCCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHc--CC-CCceEEEECcHHHhHHhhcCCCCEEE
Confidence 45679999999999999988877 4479999999999999999987642 11 24799999999987665557899999
Q ss_pred ECCCCCCCCCcccccHHHHHHHH--hhcCCCcEEEEEcCC
Q psy4592 136 TDSSDPVGPAESLFQASYFELMS--RALRPGGIVCSQAGT 173 (197)
Q Consensus 136 ~~~~~~~~~~~~l~~~~~~~~~~--~~LkpgG~l~~~~~~ 173 (197)
++++.+.. ...+.++.+. ++|+|||++++....
T Consensus 106 ~~~~~~~~-----~~~~~~~~l~~~~~L~~gG~l~~~~~~ 140 (177)
T 2esr_A 106 LDPPYAKE-----TIVATIEALAAKNLLSEQVMVVCETDK 140 (177)
T ss_dssp ECCSSHHH-----HHHHHHHHHHHTTCEEEEEEEEEEEET
T ss_pred ECCCCCcc-----hHHHHHHHHHhCCCcCCCcEEEEEECC
Confidence 99864211 1256777776 999999999997644
No 51
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.67 E-value=1.8e-16 Score=123.58 Aligned_cols=105 Identities=19% Similarity=0.313 Sum_probs=86.5
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
.++.+|||+|||+|.++..+++.. .+++++|+++.+++.|++++... ..++++++.+|+.+ ++..+++||+|+
T Consensus 36 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~l~~a~~~~~~~----~~~~v~~~~~d~~~-l~~~~~~fD~V~ 108 (260)
T 1vl5_A 36 KGNEEVLDVATGGGHVANAFAPFV--KKVVAFDLTEDILKVARAFIEGN----GHQQVEYVQGDAEQ-MPFTDERFHIVT 108 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHGGGS--SEEEEEESCHHHHHHHHHHHHHT----TCCSEEEEECCC-C-CCSCTTCEEEEE
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHhc----CCCceEEEEecHHh-CCCCCCCEEEEE
Confidence 466799999999999999988775 49999999999999999876431 22479999999876 344457999999
Q ss_pred ECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 136 TDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 136 ~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
+....++.++. ..++++++++|||||.+++..
T Consensus 109 ~~~~l~~~~d~----~~~l~~~~r~LkpgG~l~~~~ 140 (260)
T 1vl5_A 109 CRIAAHHFPNP----ASFVSEAYRVLKKGGQLLLVD 140 (260)
T ss_dssp EESCGGGCSCH----HHHHHHHHHHEEEEEEEEEEE
T ss_pred EhhhhHhcCCH----HHHHHHHHHHcCCCCEEEEEE
Confidence 99877776654 789999999999999999853
No 52
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.67 E-value=4e-16 Score=118.47 Aligned_cols=111 Identities=16% Similarity=0.214 Sum_probs=86.7
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCC---CCCeEEEEcchHHHHhhcCCcee
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLS---DPRLTVHVGDGFRFMSEHQQEFD 132 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~~D 132 (197)
.++.+|||+|||+|.++..+++..+..+++++|+++.+++.|++++... ++. .++++++++|+.. .+...++||
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~--~~~~~~~~~v~~~~~d~~~-~~~~~~~fD 104 (217)
T 3jwh_A 28 SNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRL--RLPRNQWERLQLIQGALTY-QDKRFHGYD 104 (217)
T ss_dssp TTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTC--CCCHHHHTTEEEEECCTTS-CCGGGCSCS
T ss_pred cCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHh--cCCcccCcceEEEeCCccc-ccccCCCcC
Confidence 4567999999999999999998776679999999999999999987642 111 1279999999743 233347899
Q ss_pred EEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 133 VIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 133 ~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
+|++....++.+++. ...+++++.++|||||++++..
T Consensus 105 ~v~~~~~l~~~~~~~--~~~~l~~~~~~LkpgG~li~~~ 141 (217)
T 3jwh_A 105 AATVIEVIEHLDLSR--LGAFERVLFEFAQPKIVIVTTP 141 (217)
T ss_dssp EEEEESCGGGCCHHH--HHHHHHHHHTTTCCSEEEEEEE
T ss_pred EEeeHHHHHcCCHHH--HHHHHHHHHHHcCCCEEEEEcc
Confidence 999988766554322 1579999999999999887754
No 53
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.66 E-value=4.1e-16 Score=122.92 Aligned_cols=110 Identities=16% Similarity=0.232 Sum_probs=86.3
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
.++.+|||+|||+|.++..+++..+..+++++|+++.+++.++++.... ..++++++++|+.+.++ .++||+|+
T Consensus 108 ~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~----~~~~v~~~~~d~~~~~~--~~~fD~Iv 181 (276)
T 2b3t_A 108 EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHL----AIKNIHILQSDWFSALA--GQQFAMIV 181 (276)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHH----TCCSEEEECCSTTGGGT--TCCEEEEE
T ss_pred cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc----CCCceEEEEcchhhhcc--cCCccEEE
Confidence 3457999999999999999987656689999999999999999987542 22479999999876432 46899999
Q ss_pred ECCCCCCCCC-------------ccc--------ccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 136 TDSSDPVGPA-------------ESL--------FQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 136 ~~~~~~~~~~-------------~~l--------~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
+++|...... ..+ ....+++.+.+.|+|||++++..
T Consensus 182 ~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~ 238 (276)
T 2b3t_A 182 SNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEH 238 (276)
T ss_dssp ECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred ECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 9988643311 111 12678899999999999999974
No 54
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.66 E-value=2.9e-16 Score=119.78 Aligned_cols=104 Identities=19% Similarity=0.304 Sum_probs=84.8
Q ss_pred CCCeEEEEeCCchHhHHHHhcCCC-CccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcC-----Cc
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKHPS-VESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQ-----QE 130 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~~~-~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-----~~ 130 (197)
++.+|||+|||+|..+..+++..+ ..+++++|+++.+++.|++++... + ..++++++++|+.+.++... ++
T Consensus 64 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~--~-~~~~v~~~~~d~~~~~~~~~~~~~~~~ 140 (225)
T 3tr6_A 64 QAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKA--G-LSDKIGLRLSPAKDTLAELIHAGQAWQ 140 (225)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHT--T-CTTTEEEEESCHHHHHHHHHTTTCTTC
T ss_pred CCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHC--C-CCCceEEEeCCHHHHHHHhhhccCCCC
Confidence 567999999999999999998754 589999999999999999987542 1 12469999999988765422 78
Q ss_pred eeEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEE
Q psy4592 131 FDVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQ 170 (197)
Q Consensus 131 ~D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~ 170 (197)
||+|+++.+. .. ...+++.+.++|||||++++.
T Consensus 141 fD~v~~~~~~---~~----~~~~l~~~~~~L~pgG~lv~~ 173 (225)
T 3tr6_A 141 YDLIYIDADK---AN----TDLYYEESLKLLREGGLIAVD 173 (225)
T ss_dssp EEEEEECSCG---GG----HHHHHHHHHHHEEEEEEEEEE
T ss_pred ccEEEECCCH---HH----HHHHHHHHHHhcCCCcEEEEe
Confidence 9999988741 11 267999999999999999885
No 55
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.66 E-value=3.3e-16 Score=123.69 Aligned_cols=107 Identities=20% Similarity=0.293 Sum_probs=88.9
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
..+.+|||||||+|.++..+++.. .+++++|+++.+++.|++++... + ..++++++++|+.+......++||+|+
T Consensus 67 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~~~~~--~-~~~~v~~~~~d~~~~~~~~~~~fD~v~ 141 (285)
T 4htf_A 67 PQKLRVLDAGGGEGQTAIKMAERG--HQVILCDLSAQMIDRAKQAAEAK--G-VSDNMQFIHCAAQDVASHLETPVDLIL 141 (285)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHC---C-CGGGEEEEESCGGGTGGGCSSCEEEEE
T ss_pred CCCCEEEEeCCcchHHHHHHHHCC--CEEEEEECCHHHHHHHHHHHHhc--C-CCcceEEEEcCHHHhhhhcCCCceEEE
Confidence 346799999999999999998873 69999999999999999987542 1 125899999999876544568999999
Q ss_pred ECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 136 TDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 136 ~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
+....++.++. ..+++++.++|||||++++..
T Consensus 142 ~~~~l~~~~~~----~~~l~~~~~~LkpgG~l~~~~ 173 (285)
T 4htf_A 142 FHAVLEWVADP----RSVLQTLWSVLRPGGVLSLMF 173 (285)
T ss_dssp EESCGGGCSCH----HHHHHHHHHTEEEEEEEEEEE
T ss_pred ECchhhcccCH----HHHHHHHHHHcCCCeEEEEEE
Confidence 98877666554 789999999999999999865
No 56
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.66 E-value=3.5e-16 Score=123.81 Aligned_cols=102 Identities=20% Similarity=0.316 Sum_probs=81.8
Q ss_pred CCCCCeEEEEeCCchHhHHH-HhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeE
Q psy4592 55 HPNPKKVLIVGGGDGGVARE-VLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDV 133 (197)
Q Consensus 55 ~~~~~~vLdiG~G~G~~~~~-l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~ 133 (197)
.+++.+|||||||+|.++.. +++. +.++|+++|+++++++.|++++... ++ .+++++++|+.++ + .++||+
T Consensus 120 l~~g~rVLDIGcG~G~~ta~~lA~~-~ga~V~gIDis~~~l~~Ar~~~~~~--gl--~~v~~v~gDa~~l-~--d~~FDv 191 (298)
T 3fpf_A 120 FRRGERAVFIGGGPLPLTGILLSHV-YGMRVNVVEIEPDIAELSRKVIEGL--GV--DGVNVITGDETVI-D--GLEFDV 191 (298)
T ss_dssp CCTTCEEEEECCCSSCHHHHHHHHT-TCCEEEEEESSHHHHHHHHHHHHHH--TC--CSEEEEESCGGGG-G--GCCCSE
T ss_pred CCCcCEEEEECCCccHHHHHHHHHc-cCCEEEEEECCHHHHHHHHHHHHhc--CC--CCeEEEECchhhC-C--CCCcCE
Confidence 46778999999999877644 4444 3489999999999999999987643 22 5899999999874 3 478999
Q ss_pred EEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 134 IITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 134 I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
|+++.. .++. .++++++.++|||||++++..
T Consensus 192 V~~~a~---~~d~----~~~l~el~r~LkPGG~Lvv~~ 222 (298)
T 3fpf_A 192 LMVAAL---AEPK----RRVFRNIHRYVDTETRIIYRT 222 (298)
T ss_dssp EEECTT---CSCH----HHHHHHHHHHCCTTCEEEEEE
T ss_pred EEECCC---ccCH----HHHHHHHHHHcCCCcEEEEEc
Confidence 998664 2222 689999999999999999875
No 57
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.66 E-value=1.6e-16 Score=120.47 Aligned_cols=105 Identities=15% Similarity=0.180 Sum_probs=86.4
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
.++.+|||+|||+|.++..+++.. .+++++|+++.+++.+++++.. .++++++++|+.+.. ..++||+|+
T Consensus 50 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~------~~~~~~~~~d~~~~~--~~~~fD~v~ 119 (216)
T 3ofk_A 50 GAVSNGLEIGCAAGAFTEKLAPHC--KRLTVIDVMPRAIGRACQRTKR------WSHISWAATDILQFS--TAELFDLIV 119 (216)
T ss_dssp SSEEEEEEECCTTSHHHHHHGGGE--EEEEEEESCHHHHHHHHHHTTT------CSSEEEEECCTTTCC--CSCCEEEEE
T ss_pred CCCCcEEEEcCCCCHHHHHHHHcC--CEEEEEECCHHHHHHHHHhccc------CCCeEEEEcchhhCC--CCCCccEEE
Confidence 445799999999999999998774 6999999999999999998764 248999999987654 357899999
Q ss_pred ECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 136 TDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 136 ~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
+....++.++.... ..+++++.++|||||.+++..
T Consensus 120 ~~~~l~~~~~~~~~-~~~l~~~~~~L~pgG~l~~~~ 154 (216)
T 3ofk_A 120 VAEVLYYLEDMTQM-RTAIDNMVKMLAPGGHLVFGS 154 (216)
T ss_dssp EESCGGGSSSHHHH-HHHHHHHHHTEEEEEEEEEEE
T ss_pred EccHHHhCCCHHHH-HHHHHHHHHHcCCCCEEEEEe
Confidence 99877666543111 467999999999999999864
No 58
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.66 E-value=7e-16 Score=118.72 Aligned_cols=101 Identities=16% Similarity=0.141 Sum_probs=85.8
Q ss_pred CCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEEE
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVIIT 136 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~~ 136 (197)
++.+|||||||+|.++..+++.. .+++++|+++.+++.|+++.. . +++++++|+.+. ..+++||+|++
T Consensus 42 ~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~~~-------~-~v~~~~~d~~~~--~~~~~fD~v~~ 109 (250)
T 2p7i_A 42 RPGNLLELGSFKGDFTSRLQEHF--NDITCVEASEEAISHAQGRLK-------D-GITYIHSRFEDA--QLPRRYDNIVL 109 (250)
T ss_dssp CSSCEEEESCTTSHHHHHHTTTC--SCEEEEESCHHHHHHHHHHSC-------S-CEEEEESCGGGC--CCSSCEEEEEE
T ss_pred CCCcEEEECCCCCHHHHHHHHhC--CcEEEEeCCHHHHHHHHHhhh-------C-CeEEEEccHHHc--CcCCcccEEEE
Confidence 55799999999999999998775 489999999999999999864 2 799999998775 23578999999
Q ss_pred CCCCCCCCCcccccHHHHHHHH-hhcCCCcEEEEEcCC
Q psy4592 137 DSSDPVGPAESLFQASYFELMS-RALRPGGIVCSQAGT 173 (197)
Q Consensus 137 ~~~~~~~~~~~l~~~~~~~~~~-~~LkpgG~l~~~~~~ 173 (197)
....++.+++ ..++++++ ++|||||.+++....
T Consensus 110 ~~~l~~~~~~----~~~l~~~~~~~LkpgG~l~i~~~~ 143 (250)
T 2p7i_A 110 THVLEHIDDP----VALLKRINDDWLAEGGRLFLVCPN 143 (250)
T ss_dssp ESCGGGCSSH----HHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred hhHHHhhcCH----HHHHHHHHHHhcCCCCEEEEEcCC
Confidence 8877666554 78999999 999999999997643
No 59
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.66 E-value=6.8e-16 Score=117.17 Aligned_cols=104 Identities=14% Similarity=0.110 Sum_probs=76.5
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHh--hcCCceeE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMS--EHQQEFDV 133 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~--~~~~~~D~ 133 (197)
+++.+|||+|||+|.++..+++..+..+++++|+++.+++.+.+.... ..++.++.+|+.+... ...++||+
T Consensus 56 ~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~------~~~v~~~~~d~~~~~~~~~~~~~fD~ 129 (210)
T 1nt2_A 56 RGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRE------RNNIIPLLFDASKPWKYSGIVEKVDL 129 (210)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHH------CSSEEEECSCTTCGGGTTTTCCCEEE
T ss_pred CCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhc------CCCeEEEEcCCCCchhhcccccceeE
Confidence 456799999999999999888765456999999999887655443321 1368888899865311 11378999
Q ss_pred EEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 134 IITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 134 I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
|+++...+ .. ...++++++++|||||.+++..
T Consensus 130 V~~~~~~~---~~---~~~~l~~~~r~LkpgG~l~i~~ 161 (210)
T 1nt2_A 130 IYQDIAQK---NQ---IEILKANAEFFLKEKGEVVIMV 161 (210)
T ss_dssp EEECCCST---TH---HHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEeccCh---hH---HHHHHHHHHHHhCCCCEEEEEE
Confidence 99985321 11 1346899999999999999874
No 60
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.66 E-value=7.2e-16 Score=117.10 Aligned_cols=112 Identities=20% Similarity=0.212 Sum_probs=86.6
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCC---CCCeEEEEcchHHHHhhcCCcee
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLS---DPRLTVHVGDGFRFMSEHQQEFD 132 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~~D 132 (197)
.++.+|||+|||+|.++..+++..+..+++++|+++.+++.+++++... ++. .++++++++|+.. .+...++||
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~--~~~~~~~~~v~~~~~d~~~-~~~~~~~fD 104 (219)
T 3jwg_A 28 VNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKID--RLPEMQRKRISLFQSSLVY-RDKRFSGYD 104 (219)
T ss_dssp TTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGG--GSCHHHHTTEEEEECCSSS-CCGGGTTCS
T ss_pred cCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhh--ccccccCcceEEEeCcccc-cccccCCCC
Confidence 4567999999999999999998776679999999999999999987542 111 1279999999743 333357899
Q ss_pred EEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEcC
Q psy4592 133 VIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQAG 172 (197)
Q Consensus 133 ~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~~ 172 (197)
+|++....++.+++. ...+++++.++|||||+++...+
T Consensus 105 ~V~~~~~l~~~~~~~--~~~~l~~~~~~LkpgG~~i~~~~ 142 (219)
T 3jwg_A 105 AATVIEVIEHLDENR--LQAFEKVLFEFTRPQTVIVSTPN 142 (219)
T ss_dssp EEEEESCGGGCCHHH--HHHHHHHHHTTTCCSEEEEEEEB
T ss_pred EEEEHHHHHhCCHHH--HHHHHHHHHHhhCCCEEEEEccc
Confidence 999987765554322 15799999999999997776543
No 61
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.66 E-value=3.7e-16 Score=115.61 Aligned_cols=110 Identities=17% Similarity=0.251 Sum_probs=84.9
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhh---cCCcee
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSE---HQQEFD 132 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~---~~~~~D 132 (197)
.++.+|||+|||+|.++..+++. +..+++++|+++.+++.|++++... + ..++++++++|+.+..+. ..++||
T Consensus 43 ~~~~~vLD~GcG~G~~~~~~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~--~-~~~~~~~~~~d~~~~~~~~~~~~~~fD 118 (187)
T 2fhp_A 43 FDGGMALDLYSGSGGLAIEAVSR-GMDKSICIEKNFAALKVIKENIAIT--K-EPEKFEVRKMDANRALEQFYEEKLQFD 118 (187)
T ss_dssp CSSCEEEETTCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHH--T-CGGGEEEEESCHHHHHHHHHHTTCCEE
T ss_pred cCCCCEEEeCCccCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHh--C-CCcceEEEECcHHHHHHHHHhcCCCCC
Confidence 35679999999999999988775 3469999999999999999987542 1 124799999999886542 257899
Q ss_pred EEEECCCCCCCCCcccccHHHHHHH--HhhcCCCcEEEEEcCCC
Q psy4592 133 VIITDSSDPVGPAESLFQASYFELM--SRALRPGGIVCSQAGTL 174 (197)
Q Consensus 133 ~I~~~~~~~~~~~~~l~~~~~~~~~--~~~LkpgG~l~~~~~~~ 174 (197)
+|+++++.+.. . ....++.+ .++|+|||.+++.....
T Consensus 119 ~i~~~~~~~~~-~----~~~~~~~l~~~~~L~~gG~l~~~~~~~ 157 (187)
T 2fhp_A 119 LVLLDPPYAKQ-E----IVSQLEKMLERQLLTNEAVIVCETDKT 157 (187)
T ss_dssp EEEECCCGGGC-C----HHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred EEEECCCCCch-h----HHHHHHHHHHhcccCCCCEEEEEeCCc
Confidence 99999874321 1 25666777 88999999999876543
No 62
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.65 E-value=6.2e-16 Score=119.98 Aligned_cols=103 Identities=14% Similarity=0.131 Sum_probs=86.8
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
.++.+|||+|||+|.++..+++... .+++++|+++.+++.++++.. ..+++++++|+.+ ++...++||+|+
T Consensus 43 ~~~~~vLD~GcG~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~-------~~~~~~~~~d~~~-~~~~~~~fD~v~ 113 (253)
T 3g5l_A 43 FNQKTVLDLGCGFGWHCIYAAEHGA-KKVLGIDLSERMLTEAKRKTT-------SPVVCYEQKAIED-IAIEPDAYNVVL 113 (253)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHHCC-------CTTEEEEECCGGG-CCCCTTCEEEEE
T ss_pred cCCCEEEEECCCCCHHHHHHHHcCC-CEEEEEECCHHHHHHHHHhhc-------cCCeEEEEcchhh-CCCCCCCeEEEE
Confidence 4668999999999999999988754 499999999999999999874 3589999999875 333457999999
Q ss_pred ECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 136 TDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 136 ~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
+....++..+. ..++++++++|||||.+++..
T Consensus 114 ~~~~l~~~~~~----~~~l~~~~~~LkpgG~l~~~~ 145 (253)
T 3g5l_A 114 SSLALHYIASF----DDICKKVYINLKSSGSFIFSV 145 (253)
T ss_dssp EESCGGGCSCH----HHHHHHHHHHEEEEEEEEEEE
T ss_pred EchhhhhhhhH----HHHHHHHHHHcCCCcEEEEEe
Confidence 98876665443 789999999999999999974
No 63
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.65 E-value=2.2e-16 Score=125.67 Aligned_cols=108 Identities=14% Similarity=0.139 Sum_probs=87.2
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCC-CCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcC------
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHP-SVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQ------ 128 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~-~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~------ 128 (197)
.++.+|||+|||+|.++..+++.. +..+++++|+++.+++.|++++.... + ..++++++++|+.+. +...
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~-~-~~~~v~~~~~d~~~~-~~~~~~~~~~ 111 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSP-D-TYKNVSFKISSSDDF-KFLGADSVDK 111 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC---CCTTEEEEECCTTCC-GGGCTTTTTS
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhcc-C-CCCceEEEEcCHHhC-CccccccccC
Confidence 466899999999999999998642 55899999999999999999865310 0 246899999998763 3334
Q ss_pred CceeEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 129 QEFDVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 129 ~~~D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
++||+|++....++. +. ..+++++.++|||||.+++..
T Consensus 112 ~~fD~V~~~~~l~~~-~~----~~~l~~~~~~LkpgG~l~i~~ 149 (299)
T 3g5t_A 112 QKIDMITAVECAHWF-DF----EKFQRSAYANLRKDGTIAIWG 149 (299)
T ss_dssp SCEEEEEEESCGGGS-CH----HHHHHHHHHHEEEEEEEEEEE
T ss_pred CCeeEEeHhhHHHHh-CH----HHHHHHHHHhcCCCcEEEEEe
Confidence 689999999877666 43 789999999999999998843
No 64
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.65 E-value=4.8e-16 Score=122.92 Aligned_cols=107 Identities=10% Similarity=0.114 Sum_probs=89.6
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCC-CccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPS-VESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVI 134 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~-~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I 134 (197)
.++.+|||+|||+|.++..+++..+ ..+++++|+++.+++.|++++.. .+.+++++++|+.++ +. .++||+|
T Consensus 21 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~-----~~~~v~~~~~d~~~~-~~-~~~fD~v 93 (284)
T 3gu3_A 21 TKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRL-----LPYDSEFLEGDATEI-EL-NDKYDIA 93 (284)
T ss_dssp CSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHS-----SSSEEEEEESCTTTC-CC-SSCEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHh-----cCCceEEEEcchhhc-Cc-CCCeeEE
Confidence 4668999999999999999998765 37999999999999999998764 234899999998763 33 4689999
Q ss_pred EECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEcCC
Q psy4592 135 ITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQAGT 173 (197)
Q Consensus 135 ~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~~~ 173 (197)
++....++.++. ..++++++++|||||++++....
T Consensus 94 ~~~~~l~~~~~~----~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 94 ICHAFLLHMTTP----ETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp EEESCGGGCSSH----HHHHHHHHHTEEEEEEEEEEECC
T ss_pred EECChhhcCCCH----HHHHHHHHHHcCCCCEEEEEecc
Confidence 999877666554 78999999999999999987544
No 65
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.65 E-value=8e-17 Score=124.85 Aligned_cols=105 Identities=18% Similarity=0.312 Sum_probs=85.7
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCC-CccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhc-----CC
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPS-VESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEH-----QQ 129 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~-~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~-----~~ 129 (197)
.++++|||||||+|..+..+++..+ ..+++++|+++++++.|++++... + ..++++++++|+.+.++.. .+
T Consensus 59 ~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~--g-~~~~i~~~~gda~~~l~~~~~~~~~~ 135 (242)
T 3r3h_A 59 TRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREA--K-QEHKIKLRLGPALDTLHSLLNEGGEH 135 (242)
T ss_dssp HTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHT--T-CTTTEEEEESCHHHHHHHHHHHHCSS
T ss_pred cCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc--C-CCCcEEEEEcCHHHHHHHHhhccCCC
Confidence 3567999999999999999998653 579999999999999999887642 1 1358999999998877653 47
Q ss_pred ceeEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEE
Q psy4592 130 EFDVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQ 170 (197)
Q Consensus 130 ~~D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~ 170 (197)
+||+|+++... .. ...+++.+.++|||||++++.
T Consensus 136 ~fD~V~~d~~~---~~----~~~~l~~~~~~LkpGG~lv~d 169 (242)
T 3r3h_A 136 QFDFIFIDADK---TN----YLNYYELALKLVTPKGLIAID 169 (242)
T ss_dssp CEEEEEEESCG---GG----HHHHHHHHHHHEEEEEEEEEE
T ss_pred CEeEEEEcCCh---HH----hHHHHHHHHHhcCCCeEEEEE
Confidence 89999998741 11 267899999999999999985
No 66
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.65 E-value=2.8e-16 Score=121.93 Aligned_cols=106 Identities=17% Similarity=0.262 Sum_probs=85.8
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
.++.+|||+|||+|.++..+++..+ .+++++|+++.+++.|+++.... + ..++++++++|+.+.. . .++||+|+
T Consensus 35 ~~~~~VLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~l~~a~~~~~~~--~-~~~~v~~~~~d~~~~~-~-~~~fD~V~ 108 (256)
T 1nkv_A 35 KPGTRILDLGSGSGEMLCTWARDHG-ITGTGIDMSSLFTAQAKRRAEEL--G-VSERVHFIHNDAAGYV-A-NEKCDVAA 108 (256)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHTC-CEEEEEESCHHHHHHHHHHHHHT--T-CTTTEEEEESCCTTCC-C-SSCEEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhcC-CeEEEEeCCHHHHHHHHHHHHhc--C-CCcceEEEECChHhCC-c-CCCCCEEE
Confidence 4567999999999999998887653 68999999999999999886532 1 1247999999987642 3 57899999
Q ss_pred ECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 136 TDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 136 ~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
+....++.++. ..++++++++|||||.+++..
T Consensus 109 ~~~~~~~~~~~----~~~l~~~~r~LkpgG~l~~~~ 140 (256)
T 1nkv_A 109 CVGATWIAGGF----AGAEELLAQSLKPGGIMLIGE 140 (256)
T ss_dssp EESCGGGTSSS----HHHHHHHTTSEEEEEEEEEEE
T ss_pred ECCChHhcCCH----HHHHHHHHHHcCCCeEEEEec
Confidence 97766555443 789999999999999999864
No 67
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.65 E-value=3.3e-16 Score=128.62 Aligned_cols=117 Identities=12% Similarity=0.101 Sum_probs=88.0
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCC-CCCeEEEEcchHHHHhhcCCceeEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLS-DPRLTVHVGDGFRFMSEHQQEFDVI 134 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~D~I 134 (197)
..+.+|||+|||+|.++..+++..+..+++++|+++.+++.+++++... ++. ..+++++.+|+.+.+ ..++||+|
T Consensus 221 ~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~n--gl~~~~~v~~~~~D~~~~~--~~~~fD~I 296 (375)
T 4dcm_A 221 NLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETN--MPEALDRCEFMINNALSGV--EPFRFNAV 296 (375)
T ss_dssp SCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHH--CGGGGGGEEEEECSTTTTC--CTTCEEEE
T ss_pred cCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHc--CCCcCceEEEEechhhccC--CCCCeeEE
Confidence 3447999999999999999998876789999999999999999987642 111 135888999987633 34689999
Q ss_pred EECCCCCCCCCc-ccccHHHHHHHHhhcCCCcEEEEEcCCCCc
Q psy4592 135 ITDSSDPVGPAE-SLFQASYFELMSRALRPGGIVCSQAGTLWY 176 (197)
Q Consensus 135 ~~~~~~~~~~~~-~l~~~~~~~~~~~~LkpgG~l~~~~~~~~~ 176 (197)
++|++.+..... .-...++++++.++|||||.+++..+....
T Consensus 297 i~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n~~~~ 339 (375)
T 4dcm_A 297 LCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLD 339 (375)
T ss_dssp EECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEEETTSC
T ss_pred EECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEECCcC
Confidence 999998753211 111257899999999999999997655433
No 68
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.65 E-value=1.6e-15 Score=125.02 Aligned_cols=128 Identities=14% Similarity=0.118 Sum_probs=95.0
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhh---cCCcee
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSE---HQQEFD 132 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~---~~~~~D 132 (197)
..+++|||+|||+|.++..+++.. ..+++++|+++.+++.|++++... ++...+++++++|+.++++. ...+||
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~g-a~~V~~vD~s~~al~~A~~N~~~n--~~~~~~v~~~~~D~~~~l~~~~~~~~~fD 287 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGG-AMATTSVDLAKRSRALSLAHFEAN--HLDMANHQLVVMDVFDYFKYARRHHLTYD 287 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTT-BSEEEEEESCTTHHHHHHHHHHHT--TCCCTTEEEEESCHHHHHHHHHHTTCCEE
T ss_pred cCCCeEEEEeeccCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHc--CCCccceEEEECCHHHHHHHHHHhCCCcc
Confidence 355799999999999999998763 358999999999999999987652 22212799999999987654 245899
Q ss_pred EEEECCCCCCC---CCcccc--cHHHHHHHHhhcCCCcEEEEEcCCCCcChhHHHHHHH
Q psy4592 133 VIITDSSDPVG---PAESLF--QASYFELMSRALRPGGIVCSQAGTLWYSLDCVGNTLQ 186 (197)
Q Consensus 133 ~I~~~~~~~~~---~~~~l~--~~~~~~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~ 186 (197)
+|++|||.... ...... -.++++.+.++|+|||.+++.+++.....+.+.+.+.
T Consensus 288 ~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~i~ 346 (385)
T 2b78_A 288 IIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAANMTVSQFKKQIE 346 (385)
T ss_dssp EEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHH
T ss_pred EEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCHHHHHHHHH
Confidence 99999986421 111110 1356788899999999999988777665555555443
No 69
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.65 E-value=8.6e-16 Score=122.38 Aligned_cols=110 Identities=14% Similarity=0.091 Sum_probs=88.1
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
.++.+|||||||+|.++..+++..+ .+++++|+++++++.|+++.... + ...++++..+|+.++ .++||+|+
T Consensus 71 ~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~--~-~~~~v~~~~~d~~~~----~~~fD~v~ 142 (302)
T 3hem_A 71 EPGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTLSENQYAHDKAMFDEV--D-SPRRKEVRIQGWEEF----DEPVDRIV 142 (302)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEECCHHHHHHHHHHHHHS--C-CSSCEEEEECCGGGC----CCCCSEEE
T ss_pred CCcCEEEEeeccCcHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhc--C-CCCceEEEECCHHHc----CCCccEEE
Confidence 5567999999999999999988755 79999999999999999986542 1 124799999998764 57899999
Q ss_pred ECCCCCCCCCcc-----cccHHHHHHHHhhcCCCcEEEEEcCC
Q psy4592 136 TDSSDPVGPAES-----LFQASYFELMSRALRPGGIVCSQAGT 173 (197)
Q Consensus 136 ~~~~~~~~~~~~-----l~~~~~~~~~~~~LkpgG~l~~~~~~ 173 (197)
+....++.+++. -....+++++.++|||||.+++....
T Consensus 143 ~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 185 (302)
T 3hem_A 143 SLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTIT 185 (302)
T ss_dssp EESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEE
T ss_pred EcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 987765554321 11268999999999999999997643
No 70
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.65 E-value=5e-16 Score=127.80 Aligned_cols=112 Identities=22% Similarity=0.283 Sum_probs=89.5
Q ss_pred CCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEEE
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVIIT 136 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~~ 136 (197)
++.+|||+|||+|.++..+++.. .+++++|+++.+++.|++++... ..+++++++|+.+.... .++||+|++
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~g--~~V~gvDis~~al~~A~~n~~~~-----~~~v~~~~~D~~~~~~~-~~~fD~Ii~ 304 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARMG--AEVVGVEDDLASVLSLQKGLEAN-----ALKAQALHSDVDEALTE-EARFDIIVT 304 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHTT--CEEEEEESBHHHHHHHHHHHHHT-----TCCCEEEECSTTTTSCT-TCCEEEEEE
T ss_pred CCCEEEEEeeeCCHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHHc-----CCCeEEEEcchhhcccc-CCCeEEEEE
Confidence 55799999999999999998873 69999999999999999987652 23589999998765332 478999999
Q ss_pred CCCCCCCCCccc-ccHHHHHHHHhhcCCCcEEEEEcCCCCc
Q psy4592 137 DSSDPVGPAESL-FQASYFELMSRALRPGGIVCSQAGTLWY 176 (197)
Q Consensus 137 ~~~~~~~~~~~l-~~~~~~~~~~~~LkpgG~l~~~~~~~~~ 176 (197)
+++.+....... ....+++++.++|||||.+++..+....
T Consensus 305 npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~~l~ 345 (381)
T 3dmg_A 305 NPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVSNPFLK 345 (381)
T ss_dssp CCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEECTTSC
T ss_pred CCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEEEcCCCC
Confidence 999877432111 1267999999999999999998766443
No 71
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.65 E-value=4.8e-16 Score=117.57 Aligned_cols=103 Identities=20% Similarity=0.330 Sum_probs=84.1
Q ss_pred CCCeEEEEeCCchHhHHHHhcCCC-CccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKHPS-VESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~~~-~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
++.+|||+|||+|..+..+++..+ ..+++++|+++.+++.|++++... + ..++++++.+|+.+.++...+ ||+|+
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~--~-~~~~v~~~~~d~~~~~~~~~~-fD~v~ 131 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDN--G-LIDRVELQVGDPLGIAAGQRD-IDILF 131 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHH--S-GGGGEEEEESCHHHHHTTCCS-EEEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHC--C-CCceEEEEEecHHHHhccCCC-CCEEE
Confidence 567999999999999999988754 579999999999999999887532 1 124799999999887665456 99999
Q ss_pred ECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEE
Q psy4592 136 TDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQ 170 (197)
Q Consensus 136 ~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~ 170 (197)
++... .. ...+++++.++|||||++++.
T Consensus 132 ~~~~~---~~----~~~~l~~~~~~LkpgG~lv~~ 159 (210)
T 3c3p_A 132 MDCDV---FN----GADVLERMNRCLAKNALLIAV 159 (210)
T ss_dssp EETTT---SC----HHHHHHHHGGGEEEEEEEEEE
T ss_pred EcCCh---hh----hHHHHHHHHHhcCCCeEEEEE
Confidence 98531 11 278999999999999999984
No 72
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.64 E-value=1.9e-15 Score=116.12 Aligned_cols=159 Identities=14% Similarity=0.092 Sum_probs=107.6
Q ss_pred CCCCcEEEEc-Ce--eeeeccchhhHHHHHHhhcccCCCCCCeEEEEeCCchHhHHHHhcC-CCCccEEEEEcCHHHHHH
Q psy4592 21 KEFGTALILD-GI--IQCTEFDEFSYSEMIAFLPLCSHPNPKKVLIVGGGDGGVAREVLKH-PSVESAYLVEIDNRVIEV 96 (197)
Q Consensus 21 ~~~~~~l~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~~~~~v~~ve~~~~~~~~ 96 (197)
.-||+.++-. +. ...++..-.....++..+..+..+++.+|||+|||+|..+..+++. ++..+|+++|++++|++.
T Consensus 38 ~vyge~~~~~~~~e~r~w~p~rsklaa~i~~gl~~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~ 117 (233)
T 4df3_A 38 RVYGERIFRYNGEEYREWNAYRSKLAAALLKGLIELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRD 117 (233)
T ss_dssp CSSSCCEEEETTEEEEECCTTTCHHHHHHHTTCSCCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHH
T ss_pred cccCceEEEcCCceeeeECCCchHHHHHHHhchhhcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHH
Confidence 3488876432 21 2222222111233444444455577899999999999999999875 566799999999999999
Q ss_pred HHhhcCCCCCCCCCCCeEEEEcchHHHHh--hcCCceeEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEcCCC
Q psy4592 97 SKKYLPGMAVGLSDPRLTVHVGDGFRFMS--EHQQEFDVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQAGTL 174 (197)
Q Consensus 97 a~~~~~~~~~~~~~~~~~~~~~d~~~~~~--~~~~~~D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~~~~ 174 (197)
++++... .+|+..+.+|+..... ...+++|+|+++.+.+.. ...++.++++.|||||.+++.....
T Consensus 118 l~~~a~~------~~ni~~V~~d~~~p~~~~~~~~~vDvVf~d~~~~~~------~~~~l~~~~r~LKpGG~lvI~ik~r 185 (233)
T 4df3_A 118 LLTVVRD------RRNIFPILGDARFPEKYRHLVEGVDGLYADVAQPEQ------AAIVVRNARFFLRDGGYMLMAIKAR 185 (233)
T ss_dssp HHHHSTT------CTTEEEEESCTTCGGGGTTTCCCEEEEEECCCCTTH------HHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred HHHhhHh------hcCeeEEEEeccCccccccccceEEEEEEeccCChh------HHHHHHHHHHhccCCCEEEEEEecc
Confidence 9988764 3589999999865322 235789999998764432 2678999999999999999863211
Q ss_pred -----CcChhHHHHHHHHHHhh
Q psy4592 175 -----WYSLDCVGNTLQHCASV 191 (197)
Q Consensus 175 -----~~~~~~~~~~~~~~~~~ 191 (197)
......+++..+.+++.
T Consensus 186 ~~d~~~p~~~~~~~ev~~L~~~ 207 (233)
T 4df3_A 186 SIDVTTEPSEVYKREIKTLMDG 207 (233)
T ss_dssp HHHHHTCCCHHHHHHHHHHHHT
T ss_pred cCCCCCChHHHHHHHHHHHHHC
Confidence 11234455556666544
No 73
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.64 E-value=1.2e-15 Score=117.75 Aligned_cols=120 Identities=12% Similarity=0.097 Sum_probs=89.2
Q ss_pred CCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhh--cCCceeEE
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSE--HQQEFDVI 134 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~--~~~~~D~I 134 (197)
++.+|||+|||+|..+..++...+..+++++|+++.+++.|+++.... ..++++++++|+.++... ..++||+|
T Consensus 70 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~----~~~~v~~~~~d~~~~~~~~~~~~~fD~V 145 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEAL----QLENTTFCHDRAETFGQRKDVRESYDIV 145 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHH----TCSSEEEEESCHHHHTTCTTTTTCEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHc----CCCCEEEEeccHHHhcccccccCCccEE
Confidence 567999999999999988886445579999999999999999886542 224699999999775321 14689999
Q ss_pred EECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEcCCCCcChhHHHHHHHHHHh
Q psy4592 135 ITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQAGTLWYSLDCVGNTLQHCAS 190 (197)
Q Consensus 135 ~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~ 190 (197)
++... .+ ...+++.+.++|||||.+++..+.. ..+.+..+.+.++.
T Consensus 146 ~~~~~----~~----~~~~l~~~~~~LkpgG~l~~~~g~~--~~~~~~~~~~~l~~ 191 (240)
T 1xdz_A 146 TARAV----AR----LSVLSELCLPLVKKNGLFVALKAAS--AEEELNAGKKAITT 191 (240)
T ss_dssp EEECC----SC----HHHHHHHHGGGEEEEEEEEEEECC---CHHHHHHHHHHHHH
T ss_pred EEecc----CC----HHHHHHHHHHhcCCCCEEEEEeCCC--chHHHHHHHHHHHH
Confidence 99773 12 2789999999999999999864332 22344444444443
No 74
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.64 E-value=3.9e-16 Score=122.56 Aligned_cols=107 Identities=17% Similarity=0.187 Sum_probs=89.8
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
+++.+|||||||+|.++..+++..+..+++++|+++.+++.+++++... ..++++++.+|+.+. +...++||+|+
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~----~~~~~~~~~~d~~~~-~~~~~~fD~v~ 110 (276)
T 3mgg_A 36 PPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKN----GIKNVKFLQANIFSL-PFEDSSFDHIF 110 (276)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHT----TCCSEEEEECCGGGC-CSCTTCEEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc----CCCCcEEEEcccccC-CCCCCCeeEEE
Confidence 4567999999999999999988766689999999999999999987542 235799999998763 33467999999
Q ss_pred ECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 136 TDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 136 ~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
++...++.++. ..+++++.++|||||.+++..
T Consensus 111 ~~~~l~~~~~~----~~~l~~~~~~L~pgG~l~~~~ 142 (276)
T 3mgg_A 111 VCFVLEHLQSP----EEALKSLKKVLKPGGTITVIE 142 (276)
T ss_dssp EESCGGGCSCH----HHHHHHHHHHEEEEEEEEEEE
T ss_pred EechhhhcCCH----HHHHHHHHHHcCCCcEEEEEE
Confidence 98887666654 689999999999999999865
No 75
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.64 E-value=2.8e-16 Score=114.57 Aligned_cols=104 Identities=20% Similarity=0.156 Sum_probs=83.2
Q ss_pred CCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhc---CCceeE
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEH---QQEFDV 133 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~---~~~~D~ 133 (197)
++.+|||+|||+|.++..+++... .++++|+++.+++.|++++... .. +++++++|+.+.++.. .++||+
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~--~v~~vD~~~~~~~~a~~~~~~~----~~-~~~~~~~d~~~~~~~~~~~~~~~D~ 113 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGW--EAVLVEKDPEAVRLLKENVRRT----GL-GARVVALPVEVFLPEAKAQGERFTV 113 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTC--EEEEECCCHHHHHHHHHHHHHH----TC-CCEEECSCHHHHHHHHHHTTCCEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHHHc----CC-ceEEEeccHHHHHHhhhccCCceEE
Confidence 567999999999999999988754 4999999999999999987642 12 7899999998865431 348999
Q ss_pred EEECCCCCCCCCcccccHHHHHHHH--hhcCCCcEEEEEcCC
Q psy4592 134 IITDSSDPVGPAESLFQASYFELMS--RALRPGGIVCSQAGT 173 (197)
Q Consensus 134 I~~~~~~~~~~~~~l~~~~~~~~~~--~~LkpgG~l~~~~~~ 173 (197)
|+++++.+ ... ++.++.+. ++|+|||.+++....
T Consensus 114 i~~~~~~~--~~~----~~~~~~~~~~~~L~~gG~~~~~~~~ 149 (171)
T 1ws6_A 114 AFMAPPYA--MDL----AALFGELLASGLVEAGGLYVLQHPK 149 (171)
T ss_dssp EEECCCTT--SCT----THHHHHHHHHTCEEEEEEEEEEEET
T ss_pred EEECCCCc--hhH----HHHHHHHHhhcccCCCcEEEEEeCC
Confidence 99999765 221 45677777 999999999987644
No 76
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.64 E-value=1e-15 Score=120.60 Aligned_cols=117 Identities=15% Similarity=0.116 Sum_probs=89.2
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCC-ccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhh---cCCce
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSV-ESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSE---HQQEF 131 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~-~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~---~~~~~ 131 (197)
.++.+|||+|||+|+.+..+++..+. .+++++|+++.+++.+++++... ..++++++++|+.+.... ..++|
T Consensus 82 ~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~----g~~~v~~~~~D~~~~~~~~~~~~~~f 157 (274)
T 3ajd_A 82 REDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRM----GVLNTIIINADMRKYKDYLLKNEIFF 157 (274)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHT----TCCSEEEEESCHHHHHHHHHHTTCCE
T ss_pred CCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHh----CCCcEEEEeCChHhcchhhhhccccC
Confidence 45679999999999999998874333 79999999999999999987643 224899999999876542 25689
Q ss_pred eEEEECCCCCCCCCc--------------ccccHHHHHHHHhhcCCCcEEEEEcCCCCc
Q psy4592 132 DVIITDSSDPVGPAE--------------SLFQASYFELMSRALRPGGIVCSQAGTLWY 176 (197)
Q Consensus 132 D~I~~~~~~~~~~~~--------------~l~~~~~~~~~~~~LkpgG~l~~~~~~~~~ 176 (197)
|+|++|+|....... .-...++++.+.+.|||||.+++.+++...
T Consensus 158 D~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~~ 216 (274)
T 3ajd_A 158 DKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSMEV 216 (274)
T ss_dssp EEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCCCT
T ss_pred CEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCCCh
Confidence 999999875432100 011267899999999999999998876543
No 77
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.64 E-value=1.4e-15 Score=118.34 Aligned_cols=106 Identities=16% Similarity=0.186 Sum_probs=85.4
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhh--cCCceeE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSE--HQQEFDV 133 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~--~~~~~D~ 133 (197)
..+.+|||||||+|..+..++...+..+++++|+++.+++.|+++.... ...+++++++|+.++... ..++||+
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~----~l~~v~~~~~d~~~~~~~~~~~~~fD~ 154 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVL----GLKGARALWGRAEVLAREAGHREAYAR 154 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHH----TCSSEEEEECCHHHHTTSTTTTTCEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHh----CCCceEEEECcHHHhhcccccCCCceE
Confidence 4567999999999999998887666689999999999999999987643 224699999999876432 2478999
Q ss_pred EEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEcCC
Q psy4592 134 IITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQAGT 173 (197)
Q Consensus 134 I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~~~ 173 (197)
|++.... + ...+++.+.++|||||++++..+.
T Consensus 155 I~s~a~~----~----~~~ll~~~~~~LkpgG~l~~~~g~ 186 (249)
T 3g89_A 155 AVARAVA----P----LCVLSELLLPFLEVGGAAVAMKGP 186 (249)
T ss_dssp EEEESSC----C----HHHHHHHHGGGEEEEEEEEEEECS
T ss_pred EEECCcC----C----HHHHHHHHHHHcCCCeEEEEEeCC
Confidence 9997631 1 167999999999999999886543
No 78
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.64 E-value=9.8e-16 Score=118.14 Aligned_cols=105 Identities=15% Similarity=0.176 Sum_probs=86.4
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
.++.+|||+|||+|.++..+++.. .+++++|+++.+++.+++++... ..++++++.+|+.+ ++...++||+|+
T Consensus 20 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~~----~~~~v~~~~~d~~~-~~~~~~~fD~v~ 92 (239)
T 1xxl_A 20 RAEHRVLDIGAGAGHTALAFSPYV--QECIGVDATKEMVEVASSFAQEK----GVENVRFQQGTAES-LPFPDDSFDIIT 92 (239)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGGS--SEEEEEESCHHHHHHHHHHHHHH----TCCSEEEEECBTTB-CCSCTTCEEEEE
T ss_pred CCCCEEEEEccCcCHHHHHHHHhC--CEEEEEECCHHHHHHHHHHHHHc----CCCCeEEEeccccc-CCCCCCcEEEEE
Confidence 566899999999999999988775 49999999999999999876532 22479999999865 344457899999
Q ss_pred ECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 136 TDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 136 ~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
+....++.++. ..++++++++|||||.+++..
T Consensus 93 ~~~~l~~~~~~----~~~l~~~~~~LkpgG~l~~~~ 124 (239)
T 1xxl_A 93 CRYAAHHFSDV----RKAVREVARVLKQDGRFLLVD 124 (239)
T ss_dssp EESCGGGCSCH----HHHHHHHHHHEEEEEEEEEEE
T ss_pred ECCchhhccCH----HHHHHHHHHHcCCCcEEEEEE
Confidence 98776665544 789999999999999999864
No 79
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.64 E-value=5.6e-16 Score=119.67 Aligned_cols=105 Identities=18% Similarity=0.270 Sum_probs=85.4
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCC-CccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhc------C
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPS-VESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEH------Q 128 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~-~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~------~ 128 (197)
.++++|||||||+|..+..+++..+ ..+++++|+++.+++.|++++... ++ .++++++.+|+.+.++.. .
T Consensus 69 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~--g~-~~~i~~~~gda~~~l~~l~~~~~~~ 145 (237)
T 3c3y_A 69 VNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKA--GV-EHKINFIESDAMLALDNLLQGQESE 145 (237)
T ss_dssp TTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHT--TC-GGGEEEEESCHHHHHHHHHHSTTCT
T ss_pred hCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc--CC-CCcEEEEEcCHHHHHHHHHhccCCC
Confidence 4567999999999999999987644 579999999999999999987642 22 347999999998876542 4
Q ss_pred CceeEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEE
Q psy4592 129 QEFDVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQ 170 (197)
Q Consensus 129 ~~~D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~ 170 (197)
++||+|+++... .. ...+++.+.++|+|||++++.
T Consensus 146 ~~fD~I~~d~~~---~~----~~~~l~~~~~~L~pGG~lv~d 180 (237)
T 3c3y_A 146 GSYDFGFVDADK---PN----YIKYHERLMKLVKVGGIVAYD 180 (237)
T ss_dssp TCEEEEEECSCG---GG----HHHHHHHHHHHEEEEEEEEEE
T ss_pred CCcCEEEECCch---HH----HHHHHHHHHHhcCCCeEEEEe
Confidence 789999998641 11 278999999999999999985
No 80
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.64 E-value=1.8e-15 Score=118.57 Aligned_cols=107 Identities=22% Similarity=0.265 Sum_probs=87.6
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
.++.+|||||||+|.++..+++..+ .+++++|+++.+++.++++.... + ..++++++.+|+.+ ++...++||+|+
T Consensus 60 ~~~~~vLDiGcG~G~~~~~l~~~~~-~~v~gvD~s~~~~~~a~~~~~~~--~-~~~~~~~~~~d~~~-~~~~~~~fD~v~ 134 (273)
T 3bus_A 60 RSGDRVLDVGCGIGKPAVRLATARD-VRVTGISISRPQVNQANARATAA--G-LANRVTFSYADAMD-LPFEDASFDAVW 134 (273)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHSC-CEEEEEESCHHHHHHHHHHHHHT--T-CTTTEEEEECCTTS-CCSCTTCEEEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHhcC-CEEEEEeCCHHHHHHHHHHHHhc--C-CCcceEEEECcccc-CCCCCCCccEEE
Confidence 4567999999999999999887544 79999999999999999876531 1 12479999999876 333457899999
Q ss_pred ECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 136 TDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 136 ~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
+....++.++. ..+++++.++|||||.+++..
T Consensus 135 ~~~~l~~~~~~----~~~l~~~~~~L~pgG~l~i~~ 166 (273)
T 3bus_A 135 ALESLHHMPDR----GRALREMARVLRPGGTVAIAD 166 (273)
T ss_dssp EESCTTTSSCH----HHHHHHHHTTEEEEEEEEEEE
T ss_pred EechhhhCCCH----HHHHHHHHHHcCCCeEEEEEE
Confidence 98877776554 789999999999999999875
No 81
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.64 E-value=2e-15 Score=124.55 Aligned_cols=123 Identities=17% Similarity=0.160 Sum_probs=93.6
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
+++++|||+|||+|.++..+++.+ ..++++|+|+.+++.|++++... +...++.++|+.++++...++||+|+
T Consensus 213 ~~g~~VLDlg~GtG~~sl~~a~~g--a~V~avDis~~al~~a~~n~~~n-----g~~~~~~~~D~~~~l~~~~~~fD~Ii 285 (393)
T 4dmg_A 213 RPGERVLDVYSYVGGFALRAARKG--AYALAVDKDLEALGVLDQAALRL-----GLRVDIRHGEALPTLRGLEGPFHHVL 285 (393)
T ss_dssp CTTCEEEEESCTTTHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHH-----TCCCEEEESCHHHHHHTCCCCEEEEE
T ss_pred cCCCeEEEcccchhHHHHHHHHcC--CeEEEEECCHHHHHHHHHHHHHh-----CCCCcEEEccHHHHHHHhcCCCCEEE
Confidence 346899999999999999998874 34999999999999999987652 11235779999998765444599999
Q ss_pred ECCCCCCCCCcccc-----cHHHHHHHHhhcCCCcEEEEEcCCCCcChhHHHHHH
Q psy4592 136 TDSSDPVGPAESLF-----QASYFELMSRALRPGGIVCSQAGTLWYSLDCVGNTL 185 (197)
Q Consensus 136 ~~~~~~~~~~~~l~-----~~~~~~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~ 185 (197)
+|+|........+. ..++++.+.++|+|||.+++.++++....+.+...+
T Consensus 286 ~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~~~~~~f~~~v 340 (393)
T 4dmg_A 286 LDPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYHLRLEDLLEVA 340 (393)
T ss_dssp ECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHH
T ss_pred ECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHHHHHHHH
Confidence 99986332222111 146888999999999999988888777666555554
No 82
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.63 E-value=6.7e-16 Score=119.97 Aligned_cols=119 Identities=17% Similarity=0.208 Sum_probs=92.2
Q ss_pred CCCCCeEEEEeCCchHhHHHHhcC-CCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeE
Q psy4592 55 HPNPKKVLIVGGGDGGVAREVLKH-PSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDV 133 (197)
Q Consensus 55 ~~~~~~vLdiG~G~G~~~~~l~~~-~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~ 133 (197)
..++.+|||+|||+|.++..+++. .+..+++++|+++++++.|++++... + ...+++++.+|+.+.+ ..++||+
T Consensus 91 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~--~-~~~~v~~~~~d~~~~~--~~~~~D~ 165 (255)
T 3mb5_A 91 ISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWA--G-FDDRVTIKLKDIYEGI--EEENVDH 165 (255)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHH--T-CTTTEEEECSCGGGCC--CCCSEEE
T ss_pred CCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHc--C-CCCceEEEECchhhcc--CCCCcCE
Confidence 356679999999999999999877 55689999999999999999987542 1 1235999999987643 3467999
Q ss_pred EEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEcCCCCcChhHHHHHHHHHHhh
Q psy4592 134 IITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQAGTLWYSLDCVGNTLQHCASV 191 (197)
Q Consensus 134 I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~ 191 (197)
|+++++. + ..+++++.++|+|||.+++...+ .+....+.+.+++.
T Consensus 166 v~~~~~~-----~----~~~l~~~~~~L~~gG~l~~~~~~----~~~~~~~~~~l~~~ 210 (255)
T 3mb5_A 166 VILDLPQ-----P----ERVVEHAAKALKPGGFFVAYTPC----SNQVMRLHEKLREF 210 (255)
T ss_dssp EEECSSC-----G----GGGHHHHHHHEEEEEEEEEEESS----HHHHHHHHHHHHHT
T ss_pred EEECCCC-----H----HHHHHHHHHHcCCCCEEEEEECC----HHHHHHHHHHHHHc
Confidence 9998752 2 35789999999999999987533 35555666666544
No 83
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.63 E-value=5.3e-16 Score=120.77 Aligned_cols=106 Identities=17% Similarity=0.248 Sum_probs=87.1
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
.++.+|||+|||+|.++..+++.. ..+++++|+++.+++.++++... . ++++++++|+.+. +...++||+|+
T Consensus 54 ~~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~-----~-~~~~~~~~d~~~~-~~~~~~fD~v~ 125 (266)
T 3ujc_A 54 NENSKVLDIGSGLGGGCMYINEKY-GAHTHGIDICSNIVNMANERVSG-----N-NKIIFEANDILTK-EFPENNFDLIY 125 (266)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHTCCS-----C-TTEEEEECCTTTC-CCCTTCEEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhhc-----C-CCeEEEECccccC-CCCCCcEEEEe
Confidence 456799999999999999988764 37999999999999999998764 2 6899999998763 33467999999
Q ss_pred ECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 136 TDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 136 ~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
+....++.+... ...+++++.++|||||.+++..
T Consensus 126 ~~~~l~~~~~~~--~~~~l~~~~~~L~pgG~l~~~~ 159 (266)
T 3ujc_A 126 SRDAILALSLEN--KNKLFQKCYKWLKPTGTLLITD 159 (266)
T ss_dssp EESCGGGSCHHH--HHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHhcChHH--HHHHHHHHHHHcCCCCEEEEEE
Confidence 987766652211 2789999999999999999875
No 84
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.63 E-value=5.7e-16 Score=120.30 Aligned_cols=103 Identities=16% Similarity=0.190 Sum_probs=87.0
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
.++.+|||+|||+|.++..+++..+..+++++|+++.+++.++++. ++++++++|+.+.. ..++||+|+
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~---------~~~~~~~~d~~~~~--~~~~fD~v~ 100 (259)
T 2p35_A 32 ERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRL---------PNTNFGKADLATWK--PAQKADLLY 100 (259)
T ss_dssp SCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHS---------TTSEEEECCTTTCC--CSSCEEEEE
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC---------CCcEEEECChhhcC--ccCCcCEEE
Confidence 4567999999999999999887755579999999999999999873 36899999987643 457899999
Q ss_pred ECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEcCC
Q psy4592 136 TDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQAGT 173 (197)
Q Consensus 136 ~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~~~ 173 (197)
++...++.++. ..++++++++|||||.+++....
T Consensus 101 ~~~~l~~~~~~----~~~l~~~~~~L~pgG~l~~~~~~ 134 (259)
T 2p35_A 101 ANAVFQWVPDH----LAVLSQLMDQLESGGVLAVQMPD 134 (259)
T ss_dssp EESCGGGSTTH----HHHHHHHGGGEEEEEEEEEEEEC
T ss_pred EeCchhhCCCH----HHHHHHHHHhcCCCeEEEEEeCC
Confidence 98887776554 78999999999999999997643
No 85
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.63 E-value=1.9e-15 Score=116.52 Aligned_cols=102 Identities=15% Similarity=0.184 Sum_probs=83.4
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHH-hhcCCceeEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFM-SEHQQEFDVI 134 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~~D~I 134 (197)
+++.+|||||||+|.++..+++.. .+++++|+++.+++.++++ ++++.+|+.+.+ +...++||+|
T Consensus 40 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~------------~~~~~~d~~~~~~~~~~~~fD~i 105 (240)
T 3dli_A 40 KGCRRVLDIGCGRGEFLELCKEEG--IESIGVDINEDMIKFCEGK------------FNVVKSDAIEYLKSLPDKYLDGV 105 (240)
T ss_dssp TTCSCEEEETCTTTHHHHHHHHHT--CCEEEECSCHHHHHHHHTT------------SEEECSCHHHHHHTSCTTCBSEE
T ss_pred cCCCeEEEEeCCCCHHHHHHHhCC--CcEEEEECCHHHHHHHHhh------------cceeeccHHHHhhhcCCCCeeEE
Confidence 456899999999999999888763 5899999999999998763 678889988865 3346799999
Q ss_pred EECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEcCC
Q psy4592 135 ITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQAGT 173 (197)
Q Consensus 135 ~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~~~ 173 (197)
++....++.+++.+ ..++++++++|||||++++....
T Consensus 106 ~~~~~l~~~~~~~~--~~~l~~~~~~LkpgG~l~~~~~~ 142 (240)
T 3dli_A 106 MISHFVEHLDPERL--FELLSLCYSKMKYSSYIVIESPN 142 (240)
T ss_dssp EEESCGGGSCGGGH--HHHHHHHHHHBCTTCCEEEEEEC
T ss_pred EECCchhhCCcHHH--HHHHHHHHHHcCCCcEEEEEeCC
Confidence 99887666543322 68999999999999999997644
No 86
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.62 E-value=6.2e-15 Score=109.00 Aligned_cols=119 Identities=18% Similarity=0.294 Sum_probs=92.6
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
.++.+|||+|||+|.++..+++.. .+++++|+++.+++.+++++... + ..+++++..+|+.+.++. .++||+|+
T Consensus 32 ~~~~~vldiG~G~G~~~~~l~~~~--~~v~~~D~~~~~~~~a~~~~~~~--~-~~~~~~~~~~d~~~~~~~-~~~~D~v~ 105 (192)
T 1l3i_A 32 GKNDVAVDVGCGTGGVTLELAGRV--RRVYAIDRNPEAISTTEMNLQRH--G-LGDNVTLMEGDAPEALCK-IPDIDIAV 105 (192)
T ss_dssp CTTCEEEEESCTTSHHHHHHHTTS--SEEEEEESCHHHHHHHHHHHHHT--T-CCTTEEEEESCHHHHHTT-SCCEEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhc--CEEEEEECCHHHHHHHHHHHHHc--C-CCcceEEEecCHHHhccc-CCCCCEEE
Confidence 456799999999999999998876 79999999999999999986542 1 125899999998875443 25899999
Q ss_pred ECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEcCCCCcChhHHHHHHHHHHhh
Q psy4592 136 TDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQAGTLWYSLDCVGNTLQHCASV 191 (197)
Q Consensus 136 ~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~ 191 (197)
++.+.+. ...+++.+.++|+|||.+++.... .+....+.+.+++.
T Consensus 106 ~~~~~~~-------~~~~l~~~~~~l~~gG~l~~~~~~----~~~~~~~~~~l~~~ 150 (192)
T 1l3i_A 106 VGGSGGE-------LQEILRIIKDKLKPGGRIIVTAIL----LETKFEAMECLRDL 150 (192)
T ss_dssp ESCCTTC-------HHHHHHHHHHTEEEEEEEEEEECB----HHHHHHHHHHHHHT
T ss_pred ECCchHH-------HHHHHHHHHHhcCCCcEEEEEecC----cchHHHHHHHHHHC
Confidence 9875421 178999999999999999986533 34555666666654
No 87
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.62 E-value=3.8e-15 Score=120.43 Aligned_cols=126 Identities=17% Similarity=0.218 Sum_probs=92.1
Q ss_pred CCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhh---cCCceeE
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSE---HQQEFDV 133 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~---~~~~~D~ 133 (197)
++.+|||+|||+|.++..+++.. .++++||+|+.+++.|++++... ++.+.+++++++|+.++++. ..++||+
T Consensus 153 ~~~~VLDlgcGtG~~sl~la~~g--a~V~~VD~s~~al~~a~~n~~~~--gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~ 228 (332)
T 2igt_A 153 RPLKVLNLFGYTGVASLVAAAAG--AEVTHVDASKKAIGWAKENQVLA--GLEQAPIRWICEDAMKFIQREERRGSTYDI 228 (332)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTT--CEEEEECSCHHHHHHHHHHHHHH--TCTTSCEEEECSCHHHHHHHHHHHTCCBSE
T ss_pred CCCcEEEcccccCHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHHc--CCCccceEEEECcHHHHHHHHHhcCCCceE
Confidence 45799999999999999998864 49999999999999999987642 22222599999999987653 1568999
Q ss_pred EEECCCCCC-CCCcccc-----cHHHHHHHHhhcCCCcEEEEEc-CCCCcChhHHHHHHH
Q psy4592 134 IITDSSDPV-GPAESLF-----QASYFELMSRALRPGGIVCSQA-GTLWYSLDCVGNTLQ 186 (197)
Q Consensus 134 I~~~~~~~~-~~~~~l~-----~~~~~~~~~~~LkpgG~l~~~~-~~~~~~~~~~~~~~~ 186 (197)
|++|+|... .+...+. ..++++.+.++|+|||.+++.. ++.....+.+..++.
T Consensus 229 Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~~~~~~~~~~~~l~ 288 (332)
T 2igt_A 229 ILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAYSIRASFYSMHELMR 288 (332)
T ss_dssp EEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECCTTSCHHHHHHHHH
T ss_pred EEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCCCCCCHHHHHHHHH
Confidence 999998422 2111011 1578999999999999966654 444444555555544
No 88
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.62 E-value=3.7e-16 Score=118.59 Aligned_cols=107 Identities=13% Similarity=0.132 Sum_probs=87.7
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCC-CCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHP-SVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVI 134 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~-~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I 134 (197)
.++.+|||+|||+|.++..+++.. +..+++++|+++.+++.+++++... ..++++++.+|+.+. +...++||+|
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~----~~~~~~~~~~d~~~~-~~~~~~fD~v 110 (219)
T 3dh0_A 36 KEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKL----GLKNVEVLKSEENKI-PLPDNTVDFI 110 (219)
T ss_dssp CTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHH----TCTTEEEEECBTTBC-SSCSSCEEEE
T ss_pred CCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHc----CCCcEEEEecccccC-CCCCCCeeEE
Confidence 456799999999999999988764 5579999999999999999886542 224799999998653 3345789999
Q ss_pred EECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 135 ITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 135 ~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
+++...++.++. ..+++++.++|||||.+++..
T Consensus 111 ~~~~~l~~~~~~----~~~l~~~~~~LkpgG~l~i~~ 143 (219)
T 3dh0_A 111 FMAFTFHELSEP----LKFLEELKRVAKPFAYLAIID 143 (219)
T ss_dssp EEESCGGGCSSH----HHHHHHHHHHEEEEEEEEEEE
T ss_pred EeehhhhhcCCH----HHHHHHHHHHhCCCeEEEEEE
Confidence 998877666544 789999999999999999874
No 89
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.62 E-value=1.2e-15 Score=118.68 Aligned_cols=103 Identities=18% Similarity=0.242 Sum_probs=86.3
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
.++.+|||+|||+|.++..+++.. .+++++|+++.+++.+++++.. ..+++++..+|+.+ ++...++||+|+
T Consensus 38 ~~~~~vLDiG~G~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~-----~~~~~~~~~~d~~~-~~~~~~~fD~v~ 109 (263)
T 2yqz_A 38 GEEPVFLELGVGTGRIALPLIARG--YRYIALDADAAMLEVFRQKIAG-----VDRKVQVVQADARA-IPLPDESVHGVI 109 (263)
T ss_dssp SSCCEEEEETCTTSTTHHHHHTTT--CEEEEEESCHHHHHHHHHHTTT-----SCTTEEEEESCTTS-CCSCTTCEEEEE
T ss_pred CCCCEEEEeCCcCCHHHHHHHHCC--CEEEEEECCHHHHHHHHHHhhc-----cCCceEEEEccccc-CCCCCCCeeEEE
Confidence 456799999999999999988773 6999999999999999998732 34689999999865 333457899999
Q ss_pred ECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEE
Q psy4592 136 TDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQ 170 (197)
Q Consensus 136 ~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~ 170 (197)
+....++.++. ..+++++.++|||||.+++.
T Consensus 110 ~~~~l~~~~~~----~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 110 VVHLWHLVPDW----PKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp EESCGGGCTTH----HHHHHHHHHHEEEEEEEEEE
T ss_pred ECCchhhcCCH----HHHHHHHHHHCCCCcEEEEE
Confidence 98877776554 78999999999999999886
No 90
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.62 E-value=2.3e-16 Score=124.69 Aligned_cols=122 Identities=10% Similarity=0.021 Sum_probs=92.9
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
+++.+|||+|||+|.++..+++.... +++++|+++.+++.|++++... ++ ..+++++++|+.++.. .++||+|+
T Consensus 124 ~~~~~VLDlgcG~G~~~~~la~~~~~-~V~~vD~s~~~~~~a~~n~~~n--~~-~~~v~~~~~D~~~~~~--~~~fD~Vi 197 (278)
T 2frn_A 124 KPDELVVDMFAGIGHLSLPIAVYGKA-KVIAIEKDPYTFKFLVENIHLN--KV-EDRMSAYNMDNRDFPG--ENIADRIL 197 (278)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHHTCC-EEEEECCCHHHHHHHHHHHHHT--TC-TTTEEEECSCTTTCCC--CSCEEEEE
T ss_pred CCCCEEEEecccCCHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHHc--CC-CceEEEEECCHHHhcc--cCCccEEE
Confidence 45679999999999999999887543 7999999999999999987642 22 2369999999987554 57899999
Q ss_pred ECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEcCCC--CcChhHHHHHHHHHHhh
Q psy4592 136 TDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQAGTL--WYSLDCVGNTLQHCASV 191 (197)
Q Consensus 136 ~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~~~~--~~~~~~~~~~~~~~~~~ 191 (197)
++++... .++++.+.++|||||.+++..+.+ ....+.++.+.+.+++.
T Consensus 198 ~~~p~~~--------~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 247 (278)
T 2frn_A 198 MGYVVRT--------HEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEY 247 (278)
T ss_dssp ECCCSSG--------GGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHT
T ss_pred ECCchhH--------HHHHHHHHHHCCCCeEEEEEEeeccccccccHHHHHHHHHHHc
Confidence 9986211 458899999999999999987653 22234455555555443
No 91
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.62 E-value=1.6e-15 Score=116.69 Aligned_cols=103 Identities=22% Similarity=0.245 Sum_probs=86.6
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
+++.+|||+|||+|.++..+++.. .+++++|+++.+++.++++.. .++++++++|+.+. +...++||+|+
T Consensus 52 ~~~~~vLDiG~G~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~-------~~~~~~~~~d~~~~-~~~~~~fD~v~ 121 (242)
T 3l8d_A 52 KKEAEVLDVGCGDGYGTYKLSRTG--YKAVGVDISEVMIQKGKERGE-------GPDLSFIKGDLSSL-PFENEQFEAIM 121 (242)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHTTTC-------BTTEEEEECBTTBC-SSCTTCEEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHHcC--CeEEEEECCHHHHHHHHhhcc-------cCCceEEEcchhcC-CCCCCCccEEE
Confidence 456799999999999999998873 699999999999999998752 35899999998763 33467999999
Q ss_pred ECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEcC
Q psy4592 136 TDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQAG 172 (197)
Q Consensus 136 ~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~~ 172 (197)
+....++.++. ..+++++.++|+|||++++...
T Consensus 122 ~~~~l~~~~~~----~~~l~~~~~~L~pgG~l~i~~~ 154 (242)
T 3l8d_A 122 AINSLEWTEEP----LRALNEIKRVLKSDGYACIAIL 154 (242)
T ss_dssp EESCTTSSSCH----HHHHHHHHHHEEEEEEEEEEEE
T ss_pred EcChHhhccCH----HHHHHHHHHHhCCCeEEEEEEc
Confidence 98877766554 6899999999999999999763
No 92
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.62 E-value=1.9e-15 Score=114.74 Aligned_cols=112 Identities=19% Similarity=0.276 Sum_probs=88.4
Q ss_pred HHHHHHhhcccCCCCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHH
Q psy4592 43 YSEMIAFLPLCSHPNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFR 122 (197)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~ 122 (197)
+..++..+.. .++.+|||+|||+|.++..+++.. .+++++|+++.+++.++++++ .+++++++|+.+
T Consensus 34 ~~~~l~~~~~---~~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~--------~~~~~~~~d~~~ 100 (220)
T 3hnr_A 34 YEDILEDVVN---KSFGNVLEFGVGTGNLTNKLLLAG--RTVYGIEPSREMRMIAKEKLP--------KEFSITEGDFLS 100 (220)
T ss_dssp HHHHHHHHHH---TCCSEEEEECCTTSHHHHHHHHTT--CEEEEECSCHHHHHHHHHHSC--------TTCCEESCCSSS
T ss_pred HHHHHHHhhc---cCCCeEEEeCCCCCHHHHHHHhCC--CeEEEEeCCHHHHHHHHHhCC--------CceEEEeCChhh
Confidence 3455555442 356799999999999999988773 699999999999999999863 368899999876
Q ss_pred HHhhcCCceeEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 123 FMSEHQQEFDVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 123 ~~~~~~~~~D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
. +.. ++||+|+++...++.++.. ...+++++.++|||||.+++..
T Consensus 101 ~-~~~-~~fD~v~~~~~l~~~~~~~--~~~~l~~~~~~LkpgG~l~i~~ 145 (220)
T 3hnr_A 101 F-EVP-TSIDTIVSTYAFHHLTDDE--KNVAIAKYSQLLNKGGKIVFAD 145 (220)
T ss_dssp C-CCC-SCCSEEEEESCGGGSCHHH--HHHHHHHHHHHSCTTCEEEEEE
T ss_pred c-CCC-CCeEEEEECcchhcCChHH--HHHHHHHHHHhcCCCCEEEEEe
Confidence 3 333 7899999998776655431 1348999999999999999975
No 93
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.62 E-value=2.2e-15 Score=113.10 Aligned_cols=101 Identities=17% Similarity=0.138 Sum_probs=84.1
Q ss_pred CCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEEEC
Q psy4592 58 PKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVIITD 137 (197)
Q Consensus 58 ~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~~~ 137 (197)
+.+|||+|||+|.++..+++.. .+++++|+++.+++.++++. ++++++++|+.+. +...++||+|++.
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~~---------~~~~~~~~d~~~~-~~~~~~fD~v~~~ 109 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLG--HQIEGLEPATRLVELARQTH---------PSVTFHHGTITDL-SDSPKRWAGLLAW 109 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTT--CCEEEECCCHHHHHHHHHHC---------TTSEEECCCGGGG-GGSCCCEEEEEEE
T ss_pred CCeEEEecCCCCHHHHHHHhcC--CeEEEEeCCHHHHHHHHHhC---------CCCeEEeCccccc-ccCCCCeEEEEeh
Confidence 6799999999999999988773 59999999999999999874 3689999998773 4446899999998
Q ss_pred CCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEcC
Q psy4592 138 SSDPVGPAESLFQASYFELMSRALRPGGIVCSQAG 172 (197)
Q Consensus 138 ~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~~ 172 (197)
...++.+... ...+++++.++|||||.+++...
T Consensus 110 ~~l~~~~~~~--~~~~l~~~~~~L~pgG~l~i~~~ 142 (203)
T 3h2b_A 110 YSLIHMGPGE--LPDALVALRMAVEDGGGLLMSFF 142 (203)
T ss_dssp SSSTTCCTTT--HHHHHHHHHHTEEEEEEEEEEEE
T ss_pred hhHhcCCHHH--HHHHHHHHHHHcCCCcEEEEEEc
Confidence 8766654221 27899999999999999998763
No 94
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.61 E-value=2.4e-15 Score=116.58 Aligned_cols=117 Identities=14% Similarity=0.199 Sum_probs=87.6
Q ss_pred CCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCC----CCCCCCCeEEEEcchHHHHh--hcCCc
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMA----VGLSDPRLTVHVGDGFRFMS--EHQQE 130 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~----~~~~~~~~~~~~~d~~~~~~--~~~~~ 130 (197)
++.+|||||||+|.++..+++..+...+++||+++.+++.+++++.... .....++++++.+|+.+.++ ...++
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~~ 128 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKGQ 128 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTTC
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccccc
Confidence 4569999999999999999987766799999999999999988754210 00012479999999987555 23578
Q ss_pred eeEEEECCCCCCCC----CcccccHHHHHHHHhhcCCCcEEEEEcCC
Q psy4592 131 FDVIITDSSDPVGP----AESLFQASYFELMSRALRPGGIVCSQAGT 173 (197)
Q Consensus 131 ~D~I~~~~~~~~~~----~~~l~~~~~~~~~~~~LkpgG~l~~~~~~ 173 (197)
+|.|++..+.++.. ...+....+++.+.++|+|||.+++.+..
T Consensus 129 ~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td~ 175 (246)
T 2vdv_E 129 LSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITDV 175 (246)
T ss_dssp EEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEESC
T ss_pred cCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEecc
Confidence 99999876655421 12233478999999999999999996543
No 95
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.61 E-value=6.7e-16 Score=119.07 Aligned_cols=107 Identities=20% Similarity=0.253 Sum_probs=85.5
Q ss_pred CCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEEE
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVIIT 136 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~~ 136 (197)
++.+|||+|||+|.++..+++.. ..+++++|+++.+++.|++++... ...+++++.+|+.+. +...++||+|++
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~----~~~~~~~~~~d~~~~-~~~~~~fD~v~~ 152 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL-FREVDMVDITEDFLVQAKTYLGEE----GKRVRNYFCCGLQDF-TPEPDSYDVIWI 152 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT-CSEEEEEESCHHHHHHHHHHTGGG----GGGEEEEEECCGGGC-CCCSSCEEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHhhhc----CCceEEEEEcChhhc-CCCCCCEEEEEE
Confidence 46899999999999999988775 369999999999999999987642 134689999997653 333468999999
Q ss_pred CCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 137 DSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 137 ~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
+...++.+++.+ ..+++++.++|||||++++..
T Consensus 153 ~~~l~~~~~~~~--~~~l~~~~~~LkpgG~l~i~~ 185 (241)
T 2ex4_A 153 QWVIGHLTDQHL--AEFLRRCKGSLRPNGIIVIKD 185 (241)
T ss_dssp ESCGGGSCHHHH--HHHHHHHHHHEEEEEEEEEEE
T ss_pred cchhhhCCHHHH--HHHHHHHHHhcCCCeEEEEEE
Confidence 877655544311 479999999999999999854
No 96
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.61 E-value=9.6e-16 Score=116.69 Aligned_cols=105 Identities=22% Similarity=0.235 Sum_probs=83.2
Q ss_pred CCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEEE
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVIIT 136 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~~ 136 (197)
.+.+|||+|||+|.++..+++..+ +++++|+++.+++.|+++... ..++++++++|+.+. +...++||+|++
T Consensus 38 ~~~~vLDlG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~-----~~~~~~~~~~d~~~~-~~~~~~~D~v~~ 109 (227)
T 1ve3_A 38 KRGKVLDLACGVGGFSFLLEDYGF--EVVGVDISEDMIRKAREYAKS-----RESNVEFIVGDARKL-SFEDKTFDYVIF 109 (227)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHH-----TTCCCEEEECCTTSC-CSCTTCEEEEEE
T ss_pred CCCeEEEEeccCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHh-----cCCCceEEECchhcC-CCCCCcEEEEEE
Confidence 367999999999999998888754 999999999999999998754 235799999998662 333468999999
Q ss_pred CCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 137 DSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 137 ~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
+.+.+...... ...++++++++|+|||.+++..
T Consensus 110 ~~~~~~~~~~~--~~~~l~~~~~~L~~gG~l~~~~ 142 (227)
T 1ve3_A 110 IDSIVHFEPLE--LNQVFKEVRRVLKPSGKFIMYF 142 (227)
T ss_dssp ESCGGGCCHHH--HHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCchHhCCHHH--HHHHHHHHHHHcCCCcEEEEEe
Confidence 87632222111 1679999999999999998875
No 97
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.61 E-value=7.2e-16 Score=122.54 Aligned_cols=113 Identities=19% Similarity=0.229 Sum_probs=84.1
Q ss_pred CCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCC-----------------------------
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVG----------------------------- 107 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~----------------------------- 107 (197)
.+++|||||||+|.++..+++..+..+++++|+++.+++.|++++......
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSC 125 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccccc
Confidence 568999999999999999998766689999999999999999986532100
Q ss_pred -------------------------CCCCCeEEEEcchHHH----HhhcCCceeEEEECCCCCCCC----CcccccHHHH
Q psy4592 108 -------------------------LSDPRLTVHVGDGFRF----MSEHQQEFDVIITDSSDPVGP----AESLFQASYF 154 (197)
Q Consensus 108 -------------------------~~~~~~~~~~~d~~~~----~~~~~~~~D~I~~~~~~~~~~----~~~l~~~~~~ 154 (197)
.-..++++.++|+... .+...++||+|++....++.. +. ....++
T Consensus 126 ~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~--~~~~~l 203 (292)
T 3g07_A 126 FPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDE--GLKRMF 203 (292)
T ss_dssp ----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHH--HHHHHH
T ss_pred ccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHH--HHHHHH
Confidence 0014799999998632 223467999999987653321 11 126799
Q ss_pred HHHHhhcCCCcEEEEEc
Q psy4592 155 ELMSRALRPGGIVCSQA 171 (197)
Q Consensus 155 ~~~~~~LkpgG~l~~~~ 171 (197)
++++++|+|||+|++..
T Consensus 204 ~~~~~~LkpGG~lil~~ 220 (292)
T 3g07_A 204 RRIYRHLRPGGILVLEP 220 (292)
T ss_dssp HHHHHHEEEEEEEEEEC
T ss_pred HHHHHHhCCCcEEEEec
Confidence 99999999999999964
No 98
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.61 E-value=4.4e-14 Score=103.67 Aligned_cols=114 Identities=18% Similarity=0.266 Sum_probs=89.5
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
.++.+|||+|||+|.++..+++ +..+++++|+++.+++.+++++... ..++++++++|+.+.++ .++||+|+
T Consensus 34 ~~~~~vLdiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~----~~~~~~~~~~d~~~~~~--~~~~D~i~ 105 (183)
T 2yxd_A 34 NKDDVVVDVGCGSGGMTVEIAK--RCKFVYAIDYLDGAIEVTKQNLAKF----NIKNCQIIKGRAEDVLD--KLEFNKAF 105 (183)
T ss_dssp CTTCEEEEESCCCSHHHHHHHT--TSSEEEEEECSHHHHHHHHHHHHHT----TCCSEEEEESCHHHHGG--GCCCSEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHh--cCCeEEEEeCCHHHHHHHHHHHHHc----CCCcEEEEECCcccccc--CCCCcEEE
Confidence 4567999999999999999888 4479999999999999999987542 22579999999987433 36899999
Q ss_pred ECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEcCCCCcChhHHHHHHHHHHhh
Q psy4592 136 TDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQAGTLWYSLDCVGNTLQHCASV 191 (197)
Q Consensus 136 ~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~ 191 (197)
++.+ .. ...+++.+.++ |||.+++.... .+....+.+.+++.
T Consensus 106 ~~~~----~~----~~~~l~~~~~~--~gG~l~~~~~~----~~~~~~~~~~l~~~ 147 (183)
T 2yxd_A 106 IGGT----KN----IEKIIEILDKK--KINHIVANTIV----LENAAKIINEFESR 147 (183)
T ss_dssp ECSC----SC----HHHHHHHHHHT--TCCEEEEEESC----HHHHHHHHHHHHHT
T ss_pred ECCc----cc----HHHHHHHHhhC--CCCEEEEEecc----cccHHHHHHHHHHc
Confidence 9886 22 26789999988 99999986533 35556666666654
No 99
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.61 E-value=2.5e-15 Score=118.34 Aligned_cols=101 Identities=17% Similarity=0.276 Sum_probs=84.4
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
.++.+|||+|||+|.++..+++. ..+++++|+++.+++.++++. +++++..+|+.+. +. .++||+|+
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~---------~~~~~~~~d~~~~-~~-~~~fD~v~ 122 (279)
T 3ccf_A 56 QPGEFILDLGCGTGQLTEKIAQS--GAEVLGTDNAATMIEKARQNY---------PHLHFDVADARNF-RV-DKPLDAVF 122 (279)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHC---------TTSCEEECCTTTC-CC-SSCEEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHhC--CCeEEEEECCHHHHHHHHhhC---------CCCEEEECChhhC-Cc-CCCcCEEE
Confidence 45679999999999999998883 379999999999999999875 3578999998763 33 47899999
Q ss_pred ECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEcCC
Q psy4592 136 TDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQAGT 173 (197)
Q Consensus 136 ~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~~~ 173 (197)
+....++.++. ..++++++++|||||++++....
T Consensus 123 ~~~~l~~~~d~----~~~l~~~~~~LkpgG~l~~~~~~ 156 (279)
T 3ccf_A 123 SNAMLHWVKEP----EAAIASIHQALKSGGRFVAEFGG 156 (279)
T ss_dssp EESCGGGCSCH----HHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EcchhhhCcCH----HHHHHHHHHhcCCCcEEEEEecC
Confidence 98877766554 68999999999999999987643
No 100
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.61 E-value=4.4e-15 Score=122.29 Aligned_cols=129 Identities=12% Similarity=0.108 Sum_probs=97.7
Q ss_pred CCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhc---CCceeE
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEH---QQEFDV 133 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~---~~~~D~ 133 (197)
.+.+|||+|||+|.++..+++. ..+++++|+++.+++.|++++... ...+++++++|+.++++.. ..+||+
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~n~~~n----~~~~~~~~~~d~~~~~~~~~~~~~~fD~ 282 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG--FREVVAVDSSAEALRRAEENARLN----GLGNVRVLEANAFDLLRRLEKEGERFDL 282 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH--EEEEEEEESCHHHHHHHHHHHHHT----TCTTEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred CCCeEEEeeeccCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHc----CCCCceEEECCHHHHHHHHHhcCCCeeE
Confidence 5579999999999999998876 379999999999999999987652 2235999999999876542 568999
Q ss_pred EEECCCCCCCCCcccc-----cHHHHHHHHhhcCCCcEEEEEcCCCCcChhHHHHHH-HHHHhh
Q psy4592 134 IITDSSDPVGPAESLF-----QASYFELMSRALRPGGIVCSQAGTLWYSLDCVGNTL-QHCASV 191 (197)
Q Consensus 134 I~~~~~~~~~~~~~l~-----~~~~~~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~-~~~~~~ 191 (197)
|++|+|........+. ..+++..+.++|+|||.+++.+++.....+.+...+ +.+.+.
T Consensus 283 Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~i~~~~~~~ 346 (382)
T 1wxx_A 283 VVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSHHMTEPLFYAMVAEAAQDA 346 (382)
T ss_dssp EEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHT
T ss_pred EEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHHHHHHHHHHHHHHc
Confidence 9999986443221111 156889999999999999999887766555444444 344433
No 101
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.61 E-value=1.7e-15 Score=114.50 Aligned_cols=104 Identities=16% Similarity=0.210 Sum_probs=84.9
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
+++.+|||+|||+|.++..+++.. .+++++|+++.+++.+++. ..++++++++|+.+. ...++||+|+
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~~D~s~~~~~~a~~~--------~~~~~~~~~~d~~~~--~~~~~~D~v~ 112 (218)
T 3ou2_A 45 NIRGDVLELASGTGYWTRHLSGLA--DRVTALDGSAEMIAEAGRH--------GLDNVEFRQQDLFDW--TPDRQWDAVF 112 (218)
T ss_dssp TSCSEEEEESCTTSHHHHHHHHHS--SEEEEEESCHHHHHHHGGG--------CCTTEEEEECCTTSC--CCSSCEEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhcC--CeEEEEeCCHHHHHHHHhc--------CCCCeEEEecccccC--CCCCceeEEE
Confidence 455799999999999999988773 6999999999999999882 235799999998775 3467999999
Q ss_pred ECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEcCC
Q psy4592 136 TDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQAGT 173 (197)
Q Consensus 136 ~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~~~ 173 (197)
+....++.+++. ...+++++.++|||||.+++....
T Consensus 113 ~~~~l~~~~~~~--~~~~l~~~~~~L~pgG~l~~~~~~ 148 (218)
T 3ou2_A 113 FAHWLAHVPDDR--FEAFWESVRSAVAPGGVVEFVDVT 148 (218)
T ss_dssp EESCGGGSCHHH--HHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EechhhcCCHHH--HHHHHHHHHHHcCCCeEEEEEeCC
Confidence 988766654431 167999999999999999987643
No 102
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.61 E-value=1.2e-14 Score=120.11 Aligned_cols=132 Identities=18% Similarity=0.194 Sum_probs=98.0
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhc---CCcee
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEH---QQEFD 132 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~---~~~~D 132 (197)
..+.+|||+|||+|.++..+++.+ ..+++++|+++.+++.|++++... ++..++++++++|+.++++.. ..+||
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g-~~~V~~vD~s~~al~~a~~n~~~n--gl~~~~v~~~~~D~~~~~~~~~~~~~~fD 295 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGG-CSQVVSVDTSQEALDIARQNVELN--KLDLSKAEFVRDDVFKLLRTYRDRGEKFD 295 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHT--TCCGGGEEEEESCHHHHHHHHHHTTCCEE
T ss_pred hCCCeEEEeeccCCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHc--CCCccceEEEECCHHHHHHHHHhcCCCCC
Confidence 356799999999999999998874 369999999999999999997652 110127999999999876532 46899
Q ss_pred EEEECCCCCCCCCccc-----ccHHHHHHHHhhcCCCcEEEEEcCCCCcChhHHHHHHH-HHHh
Q psy4592 133 VIITDSSDPVGPAESL-----FQASYFELMSRALRPGGIVCSQAGTLWYSLDCVGNTLQ-HCAS 190 (197)
Q Consensus 133 ~I~~~~~~~~~~~~~l-----~~~~~~~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~-~~~~ 190 (197)
+|++|+|........+ ...+++..+.+.|+|||++++.+++.....+.+...+. .+..
T Consensus 296 ~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~i~~~~~~ 359 (396)
T 3c0k_A 296 VIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGLMTSDLFQKIIADAAID 359 (396)
T ss_dssp EEEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred EEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCHHHHHHHHHHHHHH
Confidence 9999998533211111 11578899999999999999988776665454444443 4443
No 103
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.60 E-value=3.7e-15 Score=113.92 Aligned_cols=105 Identities=21% Similarity=0.291 Sum_probs=84.7
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCC-CccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhc--C---C
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPS-VESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEH--Q---Q 129 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~-~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~--~---~ 129 (197)
.++.+|||+|||+|.++..+++..+ ..+++++|+++.+++.|++++... +. .++++++.+|+.+.++.. . +
T Consensus 68 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~--g~-~~~i~~~~~d~~~~~~~~~~~~~~~ 144 (229)
T 2avd_A 68 IQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQA--EA-EHKIDLRLKPALETLDELLAAGEAG 144 (229)
T ss_dssp TTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHT--TC-TTTEEEEESCHHHHHHHHHHTTCTT
T ss_pred cCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHC--CC-CCeEEEEEcCHHHHHHHHHhcCCCC
Confidence 4567999999999999999998654 579999999999999999987542 11 258999999998765432 1 6
Q ss_pred ceeEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEE
Q psy4592 130 EFDVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQ 170 (197)
Q Consensus 130 ~~D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~ 170 (197)
+||+|+++++. .. ...+++.+.++|+|||++++.
T Consensus 145 ~~D~v~~d~~~---~~----~~~~l~~~~~~L~pgG~lv~~ 178 (229)
T 2avd_A 145 TFDVAVVDADK---EN----CSAYYERCLQLLRPGGILAVL 178 (229)
T ss_dssp CEEEEEECSCS---TT----HHHHHHHHHHHEEEEEEEEEE
T ss_pred CccEEEECCCH---HH----HHHHHHHHHHHcCCCeEEEEE
Confidence 89999998751 11 267999999999999999984
No 104
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.60 E-value=4.4e-15 Score=113.42 Aligned_cols=113 Identities=16% Similarity=0.230 Sum_probs=87.2
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCC-CCCCCCeEEEEcchHHHHhhcCCceeEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAV-GLSDPRLTVHVGDGFRFMSEHQQEFDVI 134 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~-~~~~~~~~~~~~d~~~~~~~~~~~~D~I 134 (197)
+++.+|||+|||+|.++..+++.. .+++++|+++.+++.++++....+. .....++++.++|+.+. +...++||+|
T Consensus 29 ~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~D~v 105 (235)
T 3sm3_A 29 QEDDEILDIGCGSGKISLELASKG--YSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSL-SFHDSSFDFA 105 (235)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSC-CSCTTCEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhCC--CeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEeccccc-CCCCCceeEE
Confidence 456799999999999999998873 6999999999999999998765310 01123689999998653 3345789999
Q ss_pred EECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEcC
Q psy4592 135 ITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQAG 172 (197)
Q Consensus 135 ~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~~ 172 (197)
++....++.++... ...+++++.++|||||++++...
T Consensus 106 ~~~~~l~~~~~~~~-~~~~l~~~~~~L~pgG~l~~~~~ 142 (235)
T 3sm3_A 106 VMQAFLTSVPDPKE-RSRIIKEVFRVLKPGAYLYLVEF 142 (235)
T ss_dssp EEESCGGGCCCHHH-HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEcchhhcCCCHHH-HHHHHHHHHHHcCCCeEEEEEEC
Confidence 99887666554311 13799999999999999998753
No 105
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.60 E-value=1.5e-15 Score=120.01 Aligned_cols=104 Identities=17% Similarity=0.078 Sum_probs=85.3
Q ss_pred CCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEEE
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVIIT 136 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~~ 136 (197)
++.+|||+|||+|.++..+++.. .+++++|+++.+++.+++++... ..+++++++|+.+... .++||+|++
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~g--~~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~~~d~~~~~~--~~~fD~i~~ 190 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLLG--YDVTSWDHNENSIAFLNETKEKE-----NLNISTALYDINAANI--QENYDFIVS 190 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHT-----TCCEEEEECCGGGCCC--CSCEEEEEE
T ss_pred CCCcEEEECCCCCHHHHHHHHCC--CeEEEEECCHHHHHHHHHHHHHc-----CCceEEEEeccccccc--cCCccEEEE
Confidence 56799999999999999998873 59999999999999999987642 2379999999876332 578999999
Q ss_pred CCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 137 DSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 137 ~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
+...++.+... ...+++++.++|+|||.+++..
T Consensus 191 ~~~~~~~~~~~--~~~~l~~~~~~LkpgG~l~i~~ 223 (286)
T 3m70_A 191 TVVFMFLNRER--VPSIIKNMKEHTNVGGYNLIVA 223 (286)
T ss_dssp CSSGGGSCGGG--HHHHHHHHHHTEEEEEEEEEEE
T ss_pred ccchhhCCHHH--HHHHHHHHHHhcCCCcEEEEEE
Confidence 98776654332 2689999999999999977754
No 106
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.60 E-value=3.8e-15 Score=116.15 Aligned_cols=116 Identities=22% Similarity=0.152 Sum_probs=88.1
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
.++.+|||+|||+|.++..+++... +++++|+++.+++.++++.... ...+++..+|+.+.++ .++||+|+
T Consensus 119 ~~~~~VLDiGcG~G~l~~~la~~g~--~v~gvDi~~~~v~~a~~n~~~~-----~~~v~~~~~d~~~~~~--~~~fD~Vv 189 (254)
T 2nxc_A 119 RPGDKVLDLGTGSGVLAIAAEKLGG--KALGVDIDPMVLPQAEANAKRN-----GVRPRFLEGSLEAALP--FGPFDLLV 189 (254)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTC--EEEEEESCGGGHHHHHHHHHHT-----TCCCEEEESCHHHHGG--GCCEEEEE
T ss_pred CCCCEEEEecCCCcHHHHHHHHhCC--eEEEEECCHHHHHHHHHHHHHc-----CCcEEEEECChhhcCc--CCCCCEEE
Confidence 4567999999999999999888653 9999999999999999987642 1128999999887543 46899999
Q ss_pred ECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEcCCCCcChhHHHHHHHHHHhh
Q psy4592 136 TDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQAGTLWYSLDCVGNTLQHCASV 191 (197)
Q Consensus 136 ~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~ 191 (197)
++.+.+. ...+++.+.++|||||++++.... ......+.+.+++.
T Consensus 190 ~n~~~~~-------~~~~l~~~~~~LkpgG~lils~~~----~~~~~~v~~~l~~~ 234 (254)
T 2nxc_A 190 ANLYAEL-------HAALAPRYREALVPGGRALLTGIL----KDRAPLVREAMAGA 234 (254)
T ss_dssp EECCHHH-------HHHHHHHHHHHEEEEEEEEEEEEE----GGGHHHHHHHHHHT
T ss_pred ECCcHHH-------HHHHHHHHHHHcCCCCEEEEEeec----cCCHHHHHHHHHHC
Confidence 9874221 167899999999999999986422 23344555555544
No 107
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.60 E-value=1e-15 Score=126.02 Aligned_cols=112 Identities=21% Similarity=0.220 Sum_probs=88.6
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCC-CCccEEEEEcCHHHHHHHHhhcCCCCC---C-CCCCCeEEEEcchHHHH-----h
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHP-SVESAYLVEIDNRVIEVSKKYLPGMAV---G-LSDPRLTVHVGDGFRFM-----S 125 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~-~~~~v~~ve~~~~~~~~a~~~~~~~~~---~-~~~~~~~~~~~d~~~~~-----~ 125 (197)
.++.+|||+|||+|.++..+++.. +..+++++|+++.+++.|++++..... + +..++++++++|+.+.. +
T Consensus 82 ~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~ 161 (383)
T 4fsd_A 82 LEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEG 161 (383)
T ss_dssp GTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCC
T ss_pred CCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCC
Confidence 356799999999999999888753 457999999999999999987532100 0 13368999999987642 3
Q ss_pred hcCCceeEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 126 EHQQEFDVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 126 ~~~~~~D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
...++||+|+++...++.++. ..++++++++|||||++++..
T Consensus 162 ~~~~~fD~V~~~~~l~~~~d~----~~~l~~~~r~LkpgG~l~i~~ 203 (383)
T 4fsd_A 162 VPDSSVDIVISNCVCNLSTNK----LALFKEIHRVLRDGGELYFSD 203 (383)
T ss_dssp CCTTCEEEEEEESCGGGCSCH----HHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCCEEEEEEccchhcCCCH----HHHHHHHHHHcCCCCEEEEEE
Confidence 335789999999887776654 789999999999999999864
No 108
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.60 E-value=1.7e-15 Score=116.27 Aligned_cols=107 Identities=14% Similarity=0.130 Sum_probs=85.1
Q ss_pred CCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEEE
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVIIT 136 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~~ 136 (197)
++.+|||+|||+|.++..+++. ..+++++|+++.+++.|++++.... ...+++++++|+.+.. ..++||+|++
T Consensus 66 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~~--~~~~fD~v~~ 138 (235)
T 3lcc_A 66 PLGRALVPGCGGGHDVVAMASP--ERFVVGLDISESALAKANETYGSSP---KAEYFSFVKEDVFTWR--PTELFDLIFD 138 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHCBT--TEEEEEECSCHHHHHHHHHHHTTSG---GGGGEEEECCCTTTCC--CSSCEEEEEE
T ss_pred CCCCEEEeCCCCCHHHHHHHhC--CCeEEEEECCHHHHHHHHHHhhccC---CCcceEEEECchhcCC--CCCCeeEEEE
Confidence 3459999999999999988774 3789999999999999999876411 1257999999987633 3468999999
Q ss_pred CCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEcC
Q psy4592 137 DSSDPVGPAESLFQASYFELMSRALRPGGIVCSQAG 172 (197)
Q Consensus 137 ~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~~ 172 (197)
....++.+... ...+++++.++|||||++++...
T Consensus 139 ~~~l~~~~~~~--~~~~l~~~~~~LkpgG~l~~~~~ 172 (235)
T 3lcc_A 139 YVFFCAIEPEM--RPAWAKSMYELLKPDGELITLMY 172 (235)
T ss_dssp ESSTTTSCGGG--HHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ChhhhcCCHHH--HHHHHHHHHHHCCCCcEEEEEEe
Confidence 88776654221 27899999999999999998653
No 109
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.60 E-value=4.7e-15 Score=117.09 Aligned_cols=107 Identities=14% Similarity=0.116 Sum_probs=84.7
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
.++.+|||||||+|.++..+++..+ .+++++|+++++++.+++++... + ..+++++..+|+.+. .++||+|+
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~~-~~v~gvd~s~~~~~~a~~~~~~~--~-~~~~~~~~~~d~~~~----~~~fD~v~ 134 (287)
T 1kpg_A 63 QPGMTLLDVGCGWGATMMRAVEKYD-VNVVGLTLSKNQANHVQQLVANS--E-NLRSKRVLLAGWEQF----DEPVDRIV 134 (287)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEESCHHHHHHHHHHHHTC--C-CCSCEEEEESCGGGC----CCCCSEEE
T ss_pred CCcCEEEEECCcccHHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHhc--C-CCCCeEEEECChhhC----CCCeeEEE
Confidence 4567999999999999999885544 59999999999999999886542 1 235899999998642 27899999
Q ss_pred ECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEcC
Q psy4592 136 TDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQAG 172 (197)
Q Consensus 136 ~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~~ 172 (197)
+....++.+... ...+++++.++|||||.+++...
T Consensus 135 ~~~~l~~~~~~~--~~~~l~~~~~~LkpgG~l~~~~~ 169 (287)
T 1kpg_A 135 SIGAFEHFGHER--YDAFFSLAHRLLPADGVMLLHTI 169 (287)
T ss_dssp EESCGGGTCTTT--HHHHHHHHHHHSCTTCEEEEEEE
T ss_pred EeCchhhcChHH--HHHHHHHHHHhcCCCCEEEEEEe
Confidence 987665543211 27899999999999999998763
No 110
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.60 E-value=5.8e-15 Score=116.96 Aligned_cols=109 Identities=22% Similarity=0.389 Sum_probs=84.0
Q ss_pred CCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCce---eE
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEF---DV 133 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---D~ 133 (197)
.+.+|||+|||+|.++..+++. +..+++++|+++.+++.|+++.... ++ ..+++++++|+.+.++ ++| |+
T Consensus 123 ~~~~vLDlG~GsG~~~~~la~~-~~~~v~~vDis~~al~~A~~n~~~~--~l-~~~v~~~~~D~~~~~~---~~f~~~D~ 195 (284)
T 1nv8_A 123 GIKTVADIGTGSGAIGVSVAKF-SDAIVFATDVSSKAVEIARKNAERH--GV-SDRFFVRKGEFLEPFK---EKFASIEM 195 (284)
T ss_dssp TCCEEEEESCTTSHHHHHHHHH-SSCEEEEEESCHHHHHHHHHHHHHT--TC-TTSEEEEESSTTGGGG---GGTTTCCE
T ss_pred CCCEEEEEeCchhHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHc--CC-CCceEEEECcchhhcc---cccCCCCE
Confidence 4469999999999999999887 6689999999999999999987642 11 2369999999877443 468 99
Q ss_pred EEECCCCCCCCC---------c--ccc----cHHHHHHHH-hhcCCCcEEEEEcC
Q psy4592 134 IITDSSDPVGPA---------E--SLF----QASYFELMS-RALRPGGIVCSQAG 172 (197)
Q Consensus 134 I~~~~~~~~~~~---------~--~l~----~~~~~~~~~-~~LkpgG~l~~~~~ 172 (197)
|++|+|...... + .+. ...+++++. +.|+|||.+++..+
T Consensus 196 IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~ 250 (284)
T 1nv8_A 196 ILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIG 250 (284)
T ss_dssp EEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECC
T ss_pred EEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEEC
Confidence 999987532111 0 000 026899999 99999999998653
No 111
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.60 E-value=4.9e-15 Score=111.77 Aligned_cols=101 Identities=23% Similarity=0.332 Sum_probs=82.4
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
.++.+|||+|||+|.++..+++. ..+++++|+++.+++.|++++... ..++++++.+|+.+.... .++||+|+
T Consensus 76 ~~~~~vLdiG~G~G~~~~~la~~--~~~v~~vD~~~~~~~~a~~~~~~~----~~~~v~~~~~d~~~~~~~-~~~~D~i~ 148 (210)
T 3lbf_A 76 TPQSRVLEIGTGSGYQTAILAHL--VQHVCSVERIKGLQWQARRRLKNL----DLHNVSTRHGDGWQGWQA-RAPFDAII 148 (210)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHHHHHHHT----TCCSEEEEESCGGGCCGG-GCCEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHc----CCCceEEEECCcccCCcc-CCCccEEE
Confidence 56689999999999999998877 379999999999999999987642 234799999998774433 57899999
Q ss_pred ECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEcCC
Q psy4592 136 TDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQAGT 173 (197)
Q Consensus 136 ~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~~~ 173 (197)
++...++.+ +.+.+.|||||++++....
T Consensus 149 ~~~~~~~~~----------~~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 149 VTAAPPEIP----------TALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp ESSBCSSCC----------THHHHTEEEEEEEEEEECS
T ss_pred Eccchhhhh----------HHHHHhcccCcEEEEEEcC
Confidence 987665443 2578999999999998755
No 112
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.60 E-value=1.5e-15 Score=116.61 Aligned_cols=105 Identities=24% Similarity=0.430 Sum_probs=85.9
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhc--CCceeE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEH--QQEFDV 133 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~--~~~~D~ 133 (197)
.++.+|||+|||+|..+..+++..+..+++++|+++.+++.|++++... + ..++++++.+|+.+.++.. .++||+
T Consensus 53 ~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~--~-~~~~v~~~~~d~~~~~~~~~~~~~fD~ 129 (233)
T 2gpy_A 53 AAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKAL--G-LESRIELLFGDALQLGEKLELYPLFDV 129 (233)
T ss_dssp HCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHT--T-CTTTEEEECSCGGGSHHHHTTSCCEEE
T ss_pred cCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHc--C-CCCcEEEEECCHHHHHHhcccCCCccE
Confidence 3567999999999999999988765689999999999999999987542 1 1247999999998865543 478999
Q ss_pred EEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEE
Q psy4592 134 IITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQ 170 (197)
Q Consensus 134 I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~ 170 (197)
|+++.+.+ . ...+++.+.++|+|||++++.
T Consensus 130 I~~~~~~~---~----~~~~l~~~~~~L~pgG~lv~~ 159 (233)
T 2gpy_A 130 LFIDAAKG---Q----YRRFFDMYSPMVRPGGLILSD 159 (233)
T ss_dssp EEEEGGGS---C----HHHHHHHHGGGEEEEEEEEEE
T ss_pred EEECCCHH---H----HHHHHHHHHHHcCCCeEEEEE
Confidence 99987532 1 268999999999999999986
No 113
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.60 E-value=2.4e-15 Score=116.42 Aligned_cols=106 Identities=18% Similarity=0.258 Sum_probs=86.0
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
.++.+|||+|||+|.++..+++.. ..+++++|+++.+++.+++++.. .++++++++|+.+. +...++||+|+
T Consensus 92 ~~~~~vLDiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~------~~~~~~~~~d~~~~-~~~~~~fD~v~ 163 (254)
T 1xtp_A 92 HGTSRALDCGAGIGRITKNLLTKL-YATTDLLEPVKHMLEEAKRELAG------MPVGKFILASMETA-TLPPNTYDLIV 163 (254)
T ss_dssp CCCSEEEEETCTTTHHHHHTHHHH-CSEEEEEESCHHHHHHHHHHTTT------SSEEEEEESCGGGC-CCCSSCEEEEE
T ss_pred cCCCEEEEECCCcCHHHHHHHHhh-cCEEEEEeCCHHHHHHHHHHhcc------CCceEEEEccHHHC-CCCCCCeEEEE
Confidence 456899999999999999888764 36899999999999999998753 25799999998763 33457899999
Q ss_pred ECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 136 TDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 136 ~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
+....++.++.. ...+++++.++|||||++++..
T Consensus 164 ~~~~l~~~~~~~--~~~~l~~~~~~LkpgG~l~i~~ 197 (254)
T 1xtp_A 164 IQWTAIYLTDAD--FVKFFKHCQQALTPNGYIFFKE 197 (254)
T ss_dssp EESCGGGSCHHH--HHHHHHHHHHHEEEEEEEEEEE
T ss_pred EcchhhhCCHHH--HHHHHHHHHHhcCCCeEEEEEe
Confidence 988765553321 2689999999999999999875
No 114
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.59 E-value=9.9e-16 Score=122.30 Aligned_cols=110 Identities=14% Similarity=0.203 Sum_probs=87.0
Q ss_pred CCCCeEEEEeCCchHhHHHHh-cCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVL-KHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVI 134 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~-~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I 134 (197)
+++.+|||||||+|.++..++ ...+..+++++|+++.+++.|++++... + ...+++++++|+.+. +.. ++||+|
T Consensus 117 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~--~-~~~~v~~~~~d~~~~-~~~-~~fD~v 191 (305)
T 3ocj_A 117 RPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGH--A-LAGQITLHRQDAWKL-DTR-EGYDLL 191 (305)
T ss_dssp CTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTS--T-TGGGEEEEECCGGGC-CCC-SCEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhc--C-CCCceEEEECchhcC-Ccc-CCeEEE
Confidence 566799999999999999885 4455689999999999999999987652 1 124699999998773 333 889999
Q ss_pred EECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 135 ITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 135 ~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
+++...++.++... ...++++++++|||||++++..
T Consensus 192 ~~~~~~~~~~~~~~-~~~~l~~~~~~LkpgG~l~i~~ 227 (305)
T 3ocj_A 192 TSNGLNIYEPDDAR-VTELYRRFWQALKPGGALVTSF 227 (305)
T ss_dssp ECCSSGGGCCCHHH-HHHHHHHHHHHEEEEEEEEEEC
T ss_pred EECChhhhcCCHHH-HHHHHHHHHHhcCCCeEEEEEe
Confidence 99887666544421 1348999999999999999876
No 115
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.59 E-value=2e-15 Score=112.55 Aligned_cols=106 Identities=18% Similarity=0.153 Sum_probs=84.3
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
.++.+|||+|||+|.++..+++. + .+++++|+++.+++.+++++... ..++++++.+|+.+. +. .++||+|+
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~-~-~~v~~vD~s~~~~~~a~~~~~~~----~~~~~~~~~~d~~~~-~~-~~~~D~v~ 102 (199)
T 2xvm_A 31 VKPGKTLDLGCGNGRNSLYLAAN-G-YDVDAWDKNAMSIANVERIKSIE----NLDNLHTRVVDLNNL-TF-DRQYDFIL 102 (199)
T ss_dssp SCSCEEEEETCTTSHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHHHHH----TCTTEEEEECCGGGC-CC-CCCEEEEE
T ss_pred cCCCeEEEEcCCCCHHHHHHHHC-C-CeEEEEECCHHHHHHHHHHHHhC----CCCCcEEEEcchhhC-CC-CCCceEEE
Confidence 35579999999999999998877 3 69999999999999999876532 224799999998763 33 57899999
Q ss_pred ECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 136 TDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 136 ~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
+....++.+... ...+++++.++|||||.+++..
T Consensus 103 ~~~~l~~~~~~~--~~~~l~~~~~~L~~gG~l~~~~ 136 (199)
T 2xvm_A 103 STVVLMFLEAKT--IPGLIANMQRCTKPGGYNLIVA 136 (199)
T ss_dssp EESCGGGSCGGG--HHHHHHHHHHTEEEEEEEEEEE
T ss_pred EcchhhhCCHHH--HHHHHHHHHHhcCCCeEEEEEE
Confidence 988766554221 2789999999999999977653
No 116
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.59 E-value=4.5e-15 Score=114.10 Aligned_cols=103 Identities=17% Similarity=0.213 Sum_probs=85.0
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
.++.+|||+|||+|.++..+++... .+++++|+++.+++.++++... .+++++++|+.+. +...++||+|+
T Consensus 42 ~~~~~vLdiG~G~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~-------~~~~~~~~d~~~~-~~~~~~fD~v~ 112 (243)
T 3bkw_A 42 VGGLRIVDLGCGFGWFCRWAHEHGA-SYVLGLDLSEKMLARARAAGPD-------TGITYERADLDKL-HLPQDSFDLAY 112 (243)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHTSCS-------SSEEEEECCGGGC-CCCTTCEEEEE
T ss_pred cCCCEEEEEcCcCCHHHHHHHHCCC-CeEEEEcCCHHHHHHHHHhccc-------CCceEEEcChhhc-cCCCCCceEEE
Confidence 3567999999999999999887742 4999999999999999998642 3799999998763 33357899999
Q ss_pred ECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 136 TDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 136 ~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
+....++.++. ..++++++++|+|||++++..
T Consensus 113 ~~~~l~~~~~~----~~~l~~~~~~L~pgG~l~~~~ 144 (243)
T 3bkw_A 113 SSLALHYVEDV----ARLFRTVHQALSPGGHFVFST 144 (243)
T ss_dssp EESCGGGCSCH----HHHHHHHHHHEEEEEEEEEEE
T ss_pred EeccccccchH----HHHHHHHHHhcCcCcEEEEEe
Confidence 98876655443 789999999999999999865
No 117
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.59 E-value=3.3e-15 Score=111.76 Aligned_cols=133 Identities=15% Similarity=0.167 Sum_probs=92.0
Q ss_pred hhHHHHHHhhcccCCCCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcch
Q psy4592 41 FSYSEMIAFLPLCSHPNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDG 120 (197)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~ 120 (197)
+...++...+... +++.+|||+|||+|.++..+++. ..+|+++|+++.. ..++++++++|+
T Consensus 11 ~KL~ei~~~~~~~--~~g~~VLDlG~G~G~~s~~la~~--~~~V~gvD~~~~~---------------~~~~v~~~~~D~ 71 (191)
T 3dou_A 11 FKLEFLLDRYRVV--RKGDAVIEIGSSPGGWTQVLNSL--ARKIISIDLQEME---------------EIAGVRFIRCDI 71 (191)
T ss_dssp HHHHHHHHHHCCS--CTTCEEEEESCTTCHHHHHHTTT--CSEEEEEESSCCC---------------CCTTCEEEECCT
T ss_pred HHHHHHHHHcCCC--CCCCEEEEEeecCCHHHHHHHHc--CCcEEEEeccccc---------------cCCCeEEEEccc
Confidence 3345555555432 45689999999999999999887 3799999999741 124789999997
Q ss_pred HHHH-----hh-c----CCceeEEEECCCCCCCCCccc-------ccHHHHHHHHhhcCCCcEEEEEcCCCCcChhHHHH
Q psy4592 121 FRFM-----SE-H----QQEFDVIITDSSDPVGPAESL-------FQASYFELMSRALRPGGIVCSQAGTLWYSLDCVGN 183 (197)
Q Consensus 121 ~~~~-----~~-~----~~~~D~I~~~~~~~~~~~~~l-------~~~~~~~~~~~~LkpgG~l~~~~~~~~~~~~~~~~ 183 (197)
.+.. .. . .++||+|++|++......... .....++.+.++|||||.|++.... .+....
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~----~~~~~~ 147 (191)
T 3dou_A 72 FKETIFDDIDRALREEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQ----GDMTND 147 (191)
T ss_dssp TSSSHHHHHHHHHHHHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEC----STHHHH
T ss_pred cCHHHHHHHHHHhhcccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcC----CCCHHH
Confidence 6421 00 0 148999999986433322110 0145788889999999999986532 344567
Q ss_pred HHHHHHhhCCccc
Q psy4592 184 TLQHCASVFPRLH 196 (197)
Q Consensus 184 ~~~~~~~~f~~v~ 196 (197)
+...++..|..|+
T Consensus 148 ~~~~l~~~F~~v~ 160 (191)
T 3dou_A 148 FIAIWRKNFSSYK 160 (191)
T ss_dssp HHHHHGGGEEEEE
T ss_pred HHHHHHHhcCEEE
Confidence 7778888887765
No 118
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.59 E-value=1.4e-14 Score=110.63 Aligned_cols=105 Identities=19% Similarity=0.192 Sum_probs=82.0
Q ss_pred CCCCCeEEEEeCCchHhHHHHhcC-CCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHH--hhcCCce
Q psy4592 55 HPNPKKVLIVGGGDGGVAREVLKH-PSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFM--SEHQQEF 131 (197)
Q Consensus 55 ~~~~~~vLdiG~G~G~~~~~l~~~-~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~~~ 131 (197)
..++.+|||+|||+|.++..+++. .+..+++++|+++.+++.++++... . ++++++++|+.+.. ....++|
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~-----~-~~v~~~~~d~~~~~~~~~~~~~~ 144 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEE-----R-RNIVPILGDATKPEEYRALVPKV 144 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSS-----C-TTEEEEECCTTCGGGGTTTCCCE
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhc-----c-CCCEEEEccCCCcchhhcccCCc
Confidence 345679999999999999998865 3446999999999999999888764 2 68999999987632 1224589
Q ss_pred eEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 132 DVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 132 D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
|+|+++.+. +.. ...+++++.++|||||.+++..
T Consensus 145 D~v~~~~~~---~~~---~~~~l~~~~~~LkpgG~l~~~~ 178 (227)
T 1g8a_A 145 DVIFEDVAQ---PTQ---AKILIDNAEVYLKRGGYGMIAV 178 (227)
T ss_dssp EEEEECCCS---TTH---HHHHHHHHHHHEEEEEEEEEEE
T ss_pred eEEEECCCC---HhH---HHHHHHHHHHhcCCCCEEEEEE
Confidence 999998761 111 1345999999999999998863
No 119
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.59 E-value=1.3e-15 Score=120.89 Aligned_cols=107 Identities=21% Similarity=0.306 Sum_probs=86.8
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
.++.+|||+|||+|.++..+++..+ .+++++|+++.+++.++++.... + ..++++++.+|+.+ ++...++||+|+
T Consensus 81 ~~~~~vLDiGcG~G~~~~~l~~~~~-~~v~gvD~s~~~~~~a~~~~~~~--~-~~~~~~~~~~d~~~-~~~~~~~fD~v~ 155 (297)
T 2o57_A 81 QRQAKGLDLGAGYGGAARFLVRKFG-VSIDCLNIAPVQNKRNEEYNNQA--G-LADNITVKYGSFLE-IPCEDNSYDFIW 155 (297)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEESCHHHHHHHHHHHHHH--T-CTTTEEEEECCTTS-CSSCTTCEEEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHhc--C-CCcceEEEEcCccc-CCCCCCCEeEEE
Confidence 4567999999999999999887643 69999999999999999876431 1 13579999999876 344457899999
Q ss_pred ECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 136 TDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 136 ~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
+....++.++. ..++++++++|||||.+++..
T Consensus 156 ~~~~l~~~~~~----~~~l~~~~~~LkpgG~l~~~~ 187 (297)
T 2o57_A 156 SQDAFLHSPDK----LKVFQECARVLKPRGVMAITD 187 (297)
T ss_dssp EESCGGGCSCH----HHHHHHHHHHEEEEEEEEEEE
T ss_pred ecchhhhcCCH----HHHHHHHHHHcCCCeEEEEEE
Confidence 98776665553 789999999999999999875
No 120
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.59 E-value=4.1e-15 Score=111.88 Aligned_cols=132 Identities=14% Similarity=0.097 Sum_probs=91.9
Q ss_pred CcEEEEcCeeeeeccchhhHHHHHHhhcccCCCCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCC
Q psy4592 24 GTALILDGIIQCTEFDEFSYSEMIAFLPLCSHPNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPG 103 (197)
Q Consensus 24 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~ 103 (197)
...+.++...............++..+... .+++.+|||+|||+|.++..+++. +..+++++|+++.+++.|++++..
T Consensus 28 ~~~~~~~~~~~f~~~~~~~~~~~~~~l~~~-~~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~ 105 (205)
T 3grz_A 28 QEIIRLDPGLAFGTGNHQTTQLAMLGIERA-MVKPLTVADVGTGSGILAIAAHKL-GAKSVLATDISDESMTAAEENAAL 105 (205)
T ss_dssp CEEEEESCC-----CCHHHHHHHHHHHHHH-CSSCCEEEEETCTTSHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHH
T ss_pred ceeEEecCCcccCCCCCccHHHHHHHHHHh-ccCCCEEEEECCCCCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHH
Confidence 445566655544443332223333333321 245679999999999999998876 446999999999999999998764
Q ss_pred CCCCCCCCCeEEEEcchHHHHhhcCCceeEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 104 MAVGLSDPRLTVHVGDGFRFMSEHQQEFDVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 104 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
. ...++++..+|+.+. ..++||+|+++++.+. ...+++++.++|+|||.+++..
T Consensus 106 ~----~~~~v~~~~~d~~~~---~~~~fD~i~~~~~~~~-------~~~~l~~~~~~L~~gG~l~~~~ 159 (205)
T 3grz_A 106 N----GIYDIALQKTSLLAD---VDGKFDLIVANILAEI-------LLDLIPQLDSHLNEDGQVIFSG 159 (205)
T ss_dssp T----TCCCCEEEESSTTTT---CCSCEEEEEEESCHHH-------HHHHGGGSGGGEEEEEEEEEEE
T ss_pred c----CCCceEEEecccccc---CCCCceEEEECCcHHH-------HHHHHHHHHHhcCCCCEEEEEe
Confidence 2 223499999998653 3478999999875322 1678899999999999999853
No 121
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.59 E-value=4.4e-15 Score=124.59 Aligned_cols=132 Identities=16% Similarity=0.187 Sum_probs=96.4
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCC-CccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPS-VESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVI 134 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~-~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I 134 (197)
.++.+|||+|||+|+.+..++...+ ...|+++|+++.+++.+++++... ... +.++++|+.+......++||+|
T Consensus 100 ~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~----G~~-v~~~~~Da~~l~~~~~~~FD~I 174 (464)
T 3m6w_A 100 KPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERW----GAP-LAVTQAPPRALAEAFGTYFHRV 174 (464)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHH----CCC-CEEECSCHHHHHHHHCSCEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc----CCe-EEEEECCHHHhhhhccccCCEE
Confidence 4567999999999999999886543 368999999999999999987653 223 8999999988654346789999
Q ss_pred EECCCCCCC----CCccc--------------ccHHHHHHHHhhcCCCcEEEEEcCCCCcChhHHHHHHHHHHhhCCc
Q psy4592 135 ITDSSDPVG----PAESL--------------FQASYFELMSRALRPGGIVCSQAGTLWYSLDCVGNTLQHCASVFPR 194 (197)
Q Consensus 135 ~~~~~~~~~----~~~~l--------------~~~~~~~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~f~~ 194 (197)
++|+|.... ..+.. ...++++.+.++|||||++++.+++... +....+...+.+.+|+
T Consensus 175 l~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~~~--eEne~vv~~~l~~~~~ 250 (464)
T 3m6w_A 175 LLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTFAP--EENEGVVAHFLKAHPE 250 (464)
T ss_dssp EEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCG--GGTHHHHHHHHHHCTT
T ss_pred EECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccCch--hcCHHHHHHHHHHCCC
Confidence 999986321 11111 1167899999999999999998876443 2233444444444443
No 122
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.59 E-value=2.6e-15 Score=118.24 Aligned_cols=122 Identities=11% Similarity=0.024 Sum_probs=92.9
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
.++.+|||+|||+|.++..+++..+..+++++|+++.+++.|++++... ...++.++++|+.+. +. .++||+|+
T Consensus 118 ~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n----~l~~~~~~~~d~~~~-~~-~~~~D~Vi 191 (272)
T 3a27_A 118 NENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLN----KLNNVIPILADNRDV-EL-KDVADRVI 191 (272)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHT----TCSSEEEEESCGGGC-CC-TTCEEEEE
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHc----CCCCEEEEECChHHc-Cc-cCCceEEE
Confidence 4567999999999999999988755579999999999999999987652 224789999999876 43 56899999
Q ss_pred ECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEcCCCCc-ChhHHHHHHHHHHhh
Q psy4592 136 TDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQAGTLWY-SLDCVGNTLQHCASV 191 (197)
Q Consensus 136 ~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~~~~~~-~~~~~~~~~~~~~~~ 191 (197)
++++. . ..++++.+.+.|+|||.+++....... ..+.+.+..+.+.+.
T Consensus 192 ~d~p~----~----~~~~l~~~~~~LkpgG~l~~s~~~~~~~~~~~~~~~~~~~~~~ 240 (272)
T 3a27_A 192 MGYVH----K----THKFLDKTFEFLKDRGVIHYHETVAEKIMYERPIERLKFYAEK 240 (272)
T ss_dssp ECCCS----S----GGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTHHHHHHHHHHHH
T ss_pred ECCcc----c----HHHHHHHHHHHcCCCCEEEEEEcCccccccccHHHHHHHHHHH
Confidence 99874 1 156889999999999999986543211 123445555555443
No 123
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.59 E-value=2.2e-15 Score=113.60 Aligned_cols=110 Identities=17% Similarity=0.221 Sum_probs=84.8
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
.++.+|||+|||+|.++..+++... .+++++|+++.+++.++++... .++++++.+|+.+. +...++||+|+
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~~~~~-~~v~~~D~s~~~~~~a~~~~~~------~~~i~~~~~d~~~~-~~~~~~fD~v~ 112 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELFLGGF-PNVTSVDYSSVVVAAMQACYAH------VPQLRWETMDVRKL-DFPSASFDVVL 112 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHHHTTC-CCEEEEESCHHHHHHHHHHTTT------CTTCEEEECCTTSC-CSCSSCEEEEE
T ss_pred CCCCeEEEECCCCcHHHHHHHHcCC-CcEEEEeCCHHHHHHHHHhccc------CCCcEEEEcchhcC-CCCCCcccEEE
Confidence 4567999999999999999888754 4999999999999999998753 35899999998763 33457899999
Q ss_pred ECCCCCCCC---------Cc--ccccHHHHHHHHhhcCCCcEEEEEcCC
Q psy4592 136 TDSSDPVGP---------AE--SLFQASYFELMSRALRPGGIVCSQAGT 173 (197)
Q Consensus 136 ~~~~~~~~~---------~~--~l~~~~~~~~~~~~LkpgG~l~~~~~~ 173 (197)
++.+.+... .. .-....+++++.++|||||.+++....
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 161 (215)
T 2pxx_A 113 EKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSA 161 (215)
T ss_dssp EESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred ECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCC
Confidence 876532111 00 001267999999999999999987644
No 124
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.59 E-value=7.5e-16 Score=125.13 Aligned_cols=111 Identities=23% Similarity=0.237 Sum_probs=87.5
Q ss_pred CCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEEE
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVIIT 136 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~~ 136 (197)
.+.+|||+|||+|.++..+++..+..+++++|+++.+++.+++++... ....+++.+|+.+. ..++||+|++
T Consensus 196 ~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~-----~~~~~~~~~d~~~~---~~~~fD~Iv~ 267 (343)
T 2pjd_A 196 TKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAAN-----GVEGEVFASNVFSE---VKGRFDMIIS 267 (343)
T ss_dssp CCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHT-----TCCCEEEECSTTTT---CCSCEEEEEE
T ss_pred CCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHh-----CCCCEEEEcccccc---ccCCeeEEEE
Confidence 456999999999999999988766679999999999999999987542 23467888997653 2578999999
Q ss_pred CCCCCCCCCcc-cccHHHHHHHHhhcCCCcEEEEEcCCCC
Q psy4592 137 DSSDPVGPAES-LFQASYFELMSRALRPGGIVCSQAGTLW 175 (197)
Q Consensus 137 ~~~~~~~~~~~-l~~~~~~~~~~~~LkpgG~l~~~~~~~~ 175 (197)
+++.+...... -....+++++.++|||||.+++..+...
T Consensus 268 ~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 307 (343)
T 2pjd_A 268 NPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANAFL 307 (343)
T ss_dssp CCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEETTS
T ss_pred CCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEcCCC
Confidence 99987642111 1126799999999999999999775543
No 125
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.59 E-value=5.1e-15 Score=114.23 Aligned_cols=105 Identities=10% Similarity=0.049 Sum_probs=84.4
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhc----CCce
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEH----QQEF 131 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~----~~~~ 131 (197)
.++.+|||+|||+|.++..+++..+ +++++|+++.+++.++++.. ..+++++++|+.+..... ..+|
T Consensus 55 ~~~~~vLD~GcG~G~~~~~la~~~~--~v~gvD~s~~~~~~a~~~~~-------~~~~~~~~~d~~~~~~~~~~~~~~~~ 125 (245)
T 3ggd_A 55 NPELPLIDFACGNGTQTKFLSQFFP--RVIGLDVSKSALEIAAKENT-------AANISYRLLDGLVPEQAAQIHSEIGD 125 (245)
T ss_dssp CTTSCEEEETCTTSHHHHHHHHHSS--CEEEEESCHHHHHHHHHHSC-------CTTEEEEECCTTCHHHHHHHHHHHCS
T ss_pred CCCCeEEEEcCCCCHHHHHHHHhCC--CEEEEECCHHHHHHHHHhCc-------ccCceEEECcccccccccccccccCc
Confidence 4557999999999999999988754 89999999999999999874 247999999987643221 1359
Q ss_pred eEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 132 DVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 132 D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
|+|+++...++.+... ...++++++++|||||++++..
T Consensus 126 d~v~~~~~~~~~~~~~--~~~~l~~~~~~LkpgG~l~i~~ 163 (245)
T 3ggd_A 126 ANIYMRTGFHHIPVEK--RELLGQSLRILLGKQGAMYLIE 163 (245)
T ss_dssp CEEEEESSSTTSCGGG--HHHHHHHHHHHHTTTCEEEEEE
T ss_pred cEEEEcchhhcCCHHH--HHHHHHHHHHHcCCCCEEEEEe
Confidence 9999998877765322 2789999999999999977754
No 126
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.59 E-value=1.1e-14 Score=120.37 Aligned_cols=125 Identities=20% Similarity=0.231 Sum_probs=96.4
Q ss_pred CCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhh---cCCceeE
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSE---HQQEFDV 133 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~---~~~~~D~ 133 (197)
.+.+|||+|||+|.++..+++. +..+++++|+++.+++.|++++... ++. ++++++++|+.+.++. ...+||+
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~-g~~~v~~vD~s~~~l~~a~~n~~~n--~~~-~~v~~~~~d~~~~~~~~~~~~~~fD~ 292 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIA-GADEVIGIDKSPRAIETAKENAKLN--GVE-DRMKFIVGSAFEEMEKLQKKGEKFDI 292 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHT--TCG-GGEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHc--CCC-ccceEEECCHHHHHHHHHhhCCCCCE
Confidence 5679999999999999999877 3469999999999999999987652 111 2799999999887653 2568999
Q ss_pred EEECCCCCCCCCcccc-----cHHHHHHHHhhcCCCcEEEEEcCCCCcChhHHHHHH
Q psy4592 134 IITDSSDPVGPAESLF-----QASYFELMSRALRPGGIVCSQAGTLWYSLDCVGNTL 185 (197)
Q Consensus 134 I~~~~~~~~~~~~~l~-----~~~~~~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~ 185 (197)
|++|+|........+. ..+++..+.++|+|||.+++.+++.....+.+...+
T Consensus 293 Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~v 349 (396)
T 2as0_A 293 VVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQHVDLQMFKDMI 349 (396)
T ss_dssp EEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCTTSCHHHHHHHH
T ss_pred EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCCCCCHHHHHHHH
Confidence 9999986443221111 156889999999999999998887766655555444
No 127
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.58 E-value=1.1e-14 Score=110.49 Aligned_cols=101 Identities=20% Similarity=0.266 Sum_probs=82.1
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhh---cCCcee
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSE---HQQEFD 132 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~---~~~~~D 132 (197)
..+.+|||+|||+|.++..+++.. .+++++|+++.+++.++++ .++.+..+|+.+.... ...+||
T Consensus 51 ~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~----------~~~~~~~~~~~~~~~~~~~~~~~fD 118 (227)
T 3e8s_A 51 RQPERVLDLGCGEGWLLRALADRG--IEAVGVDGDRTLVDAARAA----------GAGEVHLASYAQLAEAKVPVGKDYD 118 (227)
T ss_dssp TCCSEEEEETCTTCHHHHHHHTTT--CEEEEEESCHHHHHHHHHT----------CSSCEEECCHHHHHTTCSCCCCCEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHCC--CEEEEEcCCHHHHHHHHHh----------cccccchhhHHhhcccccccCCCcc
Confidence 456899999999999999988773 6999999999999999886 2467888998775322 234699
Q ss_pred EEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEcCC
Q psy4592 133 VIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQAGT 173 (197)
Q Consensus 133 ~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~~~ 173 (197)
+|++....+ ..+. ..++++++++|||||++++....
T Consensus 119 ~v~~~~~l~-~~~~----~~~l~~~~~~L~pgG~l~~~~~~ 154 (227)
T 3e8s_A 119 LICANFALL-HQDI----IELLSAMRTLLVPGGALVIQTLH 154 (227)
T ss_dssp EEEEESCCC-SSCC----HHHHHHHHHTEEEEEEEEEEECC
T ss_pred EEEECchhh-hhhH----HHHHHHHHHHhCCCeEEEEEecC
Confidence 999988777 3333 78999999999999999997643
No 128
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.58 E-value=3.5e-15 Score=114.78 Aligned_cols=104 Identities=22% Similarity=0.372 Sum_probs=83.8
Q ss_pred CCCeEEEEeCCchHhHHHHhcCCC-CccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhc---C--Cc
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKHPS-VESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEH---Q--QE 130 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~~~-~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~---~--~~ 130 (197)
++.+|||+|||+|..+..+++..+ ..+++++|+++++++.|++++... ++ .++++++.+|+.+.++.. . ++
T Consensus 72 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~--g~-~~~i~~~~~d~~~~l~~l~~~~~~~~ 148 (232)
T 3cbg_A 72 GAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKA--GV-AEKISLRLGPALATLEQLTQGKPLPE 148 (232)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHH--TC-GGGEEEEESCHHHHHHHHHTSSSCCC
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc--CC-CCcEEEEEcCHHHHHHHHHhcCCCCC
Confidence 567999999999999999998754 579999999999999999887532 11 247999999998765532 2 78
Q ss_pred eeEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEE
Q psy4592 131 FDVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQ 170 (197)
Q Consensus 131 ~D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~ 170 (197)
||+|+++... .. ...+++++.++|+|||++++.
T Consensus 149 fD~V~~d~~~---~~----~~~~l~~~~~~LkpgG~lv~~ 181 (232)
T 3cbg_A 149 FDLIFIDADK---RN----YPRYYEIGLNLLRRGGLMVID 181 (232)
T ss_dssp EEEEEECSCG---GG----HHHHHHHHHHTEEEEEEEEEE
T ss_pred cCEEEECCCH---HH----HHHHHHHHHHHcCCCeEEEEe
Confidence 9999998741 11 267999999999999999985
No 129
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.58 E-value=4.1e-15 Score=108.50 Aligned_cols=97 Identities=14% Similarity=0.141 Sum_probs=82.5
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
.++.+|||+|||+|.++..+++.. .+++++|+++.+++.++++. +++++..+| .+...++||+|+
T Consensus 16 ~~~~~vLDiG~G~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~---------~~v~~~~~d----~~~~~~~~D~v~ 80 (170)
T 3i9f_A 16 GKKGVIVDYGCGNGFYCKYLLEFA--TKLYCIDINVIALKEVKEKF---------DSVITLSDP----KEIPDNSVDFIL 80 (170)
T ss_dssp SCCEEEEEETCTTCTTHHHHHTTE--EEEEEECSCHHHHHHHHHHC---------TTSEEESSG----GGSCTTCEEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhhc--CeEEEEeCCHHHHHHHHHhC---------CCcEEEeCC----CCCCCCceEEEE
Confidence 456799999999999999998876 49999999999999999872 368899998 344467899999
Q ss_pred ECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 136 TDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 136 ~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
+....++.++. ..+++++.++|||||++++..
T Consensus 81 ~~~~l~~~~~~----~~~l~~~~~~L~pgG~l~~~~ 112 (170)
T 3i9f_A 81 FANSFHDMDDK----QHVISEVKRILKDDGRVIIID 112 (170)
T ss_dssp EESCSTTCSCH----HHHHHHHHHHEEEEEEEEEEE
T ss_pred EccchhcccCH----HHHHHHHHHhcCCCCEEEEEE
Confidence 99887766554 789999999999999999875
No 130
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.58 E-value=8.9e-16 Score=115.54 Aligned_cols=119 Identities=14% Similarity=0.222 Sum_probs=85.4
Q ss_pred HHHHHHhhcccCCCCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHH
Q psy4592 43 YSEMIAFLPLCSHPNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFR 122 (197)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~ 122 (197)
+.+++..+... .++.+|||+|||+|..+..++...+ .+++++|+++.+++.++++... ...+++++++|+.+
T Consensus 11 ~~~~~~~~~~~--~~~~~vLDiGcG~G~~~~~~~~~~~-~~v~~vD~s~~~~~~a~~~~~~-----~~~~~~~~~~d~~~ 82 (209)
T 2p8j_A 11 LYRFLKYCNES--NLDKTVLDCGAGGDLPPLSIFVEDG-YKTYGIEISDLQLKKAENFSRE-----NNFKLNISKGDIRK 82 (209)
T ss_dssp HHHHHHHHHHS--SSCSEEEEESCCSSSCTHHHHHHTT-CEEEEEECCHHHHHHHHHHHHH-----HTCCCCEEECCTTS
T ss_pred HHHHHHHHhcc--CCCCEEEEECCCCCHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHh-----cCCceEEEECchhh
Confidence 34444444322 4567999999999987444333323 6999999999999999987653 12478899999876
Q ss_pred HHhhcCCceeEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEcC
Q psy4592 123 FMSEHQQEFDVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQAG 172 (197)
Q Consensus 123 ~~~~~~~~~D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~~ 172 (197)
. +...++||+|++....++.+... ...++++++++|||||.+++...
T Consensus 83 ~-~~~~~~fD~v~~~~~l~~~~~~~--~~~~l~~~~~~LkpgG~l~~~~~ 129 (209)
T 2p8j_A 83 L-PFKDESMSFVYSYGTIFHMRKND--VKEAIDEIKRVLKPGGLACINFL 129 (209)
T ss_dssp C-CSCTTCEEEEEECSCGGGSCHHH--HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred C-CCCCCceeEEEEcChHHhCCHHH--HHHHHHHHHHHcCCCcEEEEEEe
Confidence 2 33357899999976554442111 26799999999999999998763
No 131
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.58 E-value=1.9e-14 Score=126.65 Aligned_cols=115 Identities=17% Similarity=0.205 Sum_probs=90.2
Q ss_pred CCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEEE
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVIIT 136 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~~ 136 (197)
++++|||+|||+|.++..+++.+ ..++++||+|+.+++.|++++... ++...+++++++|+.++++...++||+|++
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~g-a~~V~aVD~s~~al~~a~~N~~~n--gl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~ 615 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLGG-ARSTTTVDMSRTYLEWAERNLRLN--GLTGRAHRLIQADCLAWLREANEQFDLIFI 615 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHT--TCCSTTEEEEESCHHHHHHHCCCCEEEEEE
T ss_pred CCCcEEEeeechhHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHc--CCCccceEEEecCHHHHHHhcCCCccEEEE
Confidence 56799999999999999988754 357999999999999999997652 233357999999999988776679999999
Q ss_pred CCCCCCCCCc--cc-----ccHHHHHHHHhhcCCCcEEEEEcCCC
Q psy4592 137 DSSDPVGPAE--SL-----FQASYFELMSRALRPGGIVCSQAGTL 174 (197)
Q Consensus 137 ~~~~~~~~~~--~l-----~~~~~~~~~~~~LkpgG~l~~~~~~~ 174 (197)
|+|....... .. ...++++.+.++|+|||++++..++.
T Consensus 616 DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~~ 660 (703)
T 3v97_A 616 DPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKR 660 (703)
T ss_dssp CCCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECCT
T ss_pred CCccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCc
Confidence 9985331110 00 11567899999999999999877663
No 132
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.58 E-value=1.9e-15 Score=119.63 Aligned_cols=115 Identities=15% Similarity=0.122 Sum_probs=84.7
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHh--hcCCceeE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMS--EHQQEFDV 133 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~--~~~~~~D~ 133 (197)
.++.+|||||||+|.++..+++.. .+++++|+++.+++.|+++...........++.+..+|+.+... ...++||+
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~ 133 (293)
T 3thr_A 56 HGCHRVLDVACGTGVDSIMLVEEG--FSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFDA 133 (293)
T ss_dssp TTCCEEEETTCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCCTTCEEE
T ss_pred cCCCEEEEecCCCCHHHHHHHHCC--CeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccccccCCCeEE
Confidence 356799999999999999998874 59999999999999998764211000012478899999877531 23578999
Q ss_pred EEEC-CCCCCCCCc---ccccHHHHHHHHhhcCCCcEEEEEcC
Q psy4592 134 IITD-SSDPVGPAE---SLFQASYFELMSRALRPGGIVCSQAG 172 (197)
Q Consensus 134 I~~~-~~~~~~~~~---~l~~~~~~~~~~~~LkpgG~l~~~~~ 172 (197)
|++. ...++.++. .-....++++++++|||||++++...
T Consensus 134 V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 176 (293)
T 3thr_A 134 VICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHR 176 (293)
T ss_dssp EEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 9997 555444430 00127899999999999999998753
No 133
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.57 E-value=3.8e-15 Score=118.99 Aligned_cols=114 Identities=14% Similarity=0.081 Sum_probs=79.5
Q ss_pred CCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCC--CCCCeEEEEcch------HHHHh-hc
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGL--SDPRLTVHVGDG------FRFMS-EH 127 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~--~~~~~~~~~~d~------~~~~~-~~ 127 (197)
++.+|||||||+|..+..++... ..+++|+|+|+.+++.|++..+...... ...++++.+.|+ .+... ..
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~-~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~ 126 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGE-IALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFY 126 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCC
T ss_pred CCCeEEEEecCCcHhHHHHHhcC-CCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhcccc
Confidence 45799999999998666555543 3689999999999999998764310000 001266778876 33221 23
Q ss_pred CCceeEEEECCCCCCC-CCcccccHHHHHHHHhhcCCCcEEEEEcCC
Q psy4592 128 QQEFDVIITDSSDPVG-PAESLFQASYFELMSRALRPGGIVCSQAGT 173 (197)
Q Consensus 128 ~~~~D~I~~~~~~~~~-~~~~l~~~~~~~~~~~~LkpgG~l~~~~~~ 173 (197)
.++||+|++....|+. ...+ ...++++++++|||||+|++.+.+
T Consensus 127 ~~~FD~V~~~~~lhy~~~~~~--~~~~l~~~~r~LkpGG~~i~~~~~ 171 (302)
T 2vdw_A 127 FGKFNIIDWQFAIHYSFHPRH--YATVMNNLSELTASGGKVLITTMD 171 (302)
T ss_dssp SSCEEEEEEESCGGGTCSTTT--HHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCCeeEEEECchHHHhCCHHH--HHHHHHHHHHHcCCCCEEEEEeCC
Confidence 5689999998766543 2222 268999999999999999987643
No 134
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.57 E-value=8.6e-15 Score=109.62 Aligned_cols=133 Identities=15% Similarity=0.101 Sum_probs=87.9
Q ss_pred HHHHHHhhcccCCCCCCeEEEEeCCchHhHHHHhcCCC--CccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcch
Q psy4592 43 YSEMIAFLPLCSHPNPKKVLIVGGGDGGVAREVLKHPS--VESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDG 120 (197)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~--~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~ 120 (197)
..++...+..+ +++.+|||+|||+|.++..+++..+ ..+++++|+++.. . .++++++++|+
T Consensus 10 l~~~~~~~~~~--~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~--------~-------~~~v~~~~~d~ 72 (201)
T 2plw_A 10 LIELDNKYLFL--KKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD--------P-------IPNVYFIQGEI 72 (201)
T ss_dssp HHHHHHHHCCC--CTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC--------C-------CTTCEEEECCT
T ss_pred HHHHHHHcCCC--CCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC--------C-------CCCceEEEccc
Confidence 34444444322 4567999999999999999987655 5799999999831 1 23678888887
Q ss_pred HHHH-----------------------h-hcCCceeEEEECCCCCCCCCcccc-------cHHHHHHHHhhcCCCcEEEE
Q psy4592 121 FRFM-----------------------S-EHQQEFDVIITDSSDPVGPAESLF-------QASYFELMSRALRPGGIVCS 169 (197)
Q Consensus 121 ~~~~-----------------------~-~~~~~~D~I~~~~~~~~~~~~~l~-------~~~~~~~~~~~LkpgG~l~~ 169 (197)
.+.. . ...++||+|+++...++....... ....++.+.++|||||.+++
T Consensus 73 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~ 152 (201)
T 2plw_A 73 GKDNMNNIKNINYIDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIV 152 (201)
T ss_dssp TTTSSCCC-----------CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred cchhhhhhccccccccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEE
Confidence 6531 0 224689999999876553211100 02478889999999999998
Q ss_pred EcCCCCcChhHHHHHHHHHHhhCCccc
Q psy4592 170 QAGTLWYSLDCVGNTLQHCASVFPRLH 196 (197)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~f~~v~ 196 (197)
.... .+....+...++..|..++
T Consensus 153 ~~~~----~~~~~~l~~~l~~~f~~v~ 175 (201)
T 2plw_A 153 KMYL----GSQTNNLKTYLKGMFQLVH 175 (201)
T ss_dssp EEEC----STTHHHHHHHHHTTEEEEE
T ss_pred EEeC----CCCHHHHHHHHHHHHheEE
Confidence 6533 1334455566666665543
No 135
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.57 E-value=1.1e-14 Score=116.86 Aligned_cols=115 Identities=17% Similarity=0.201 Sum_probs=87.4
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCC-CCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHP-SVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVI 134 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~-~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I 134 (197)
.++.+|||+|||+|..+..+++.. +..+++++|+++.+++.+++++... ..++++++++|+.+... ..++||+|
T Consensus 117 ~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~----g~~~v~~~~~D~~~~~~-~~~~fD~I 191 (315)
T 1ixk_A 117 KPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRL----GVLNVILFHSSSLHIGE-LNVEFDKI 191 (315)
T ss_dssp CTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHH----TCCSEEEESSCGGGGGG-GCCCEEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHh----CCCeEEEEECChhhccc-ccccCCEE
Confidence 456799999999999999988753 3479999999999999999987643 22479999999887543 35689999
Q ss_pred EECCCCCCC----CCccc--------------ccHHHHHHHHhhcCCCcEEEEEcCCCC
Q psy4592 135 ITDSSDPVG----PAESL--------------FQASYFELMSRALRPGGIVCSQAGTLW 175 (197)
Q Consensus 135 ~~~~~~~~~----~~~~l--------------~~~~~~~~~~~~LkpgG~l~~~~~~~~ 175 (197)
++|++.... ..+.. ...++++++.++|||||++++.+++..
T Consensus 192 l~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~ 250 (315)
T 1ixk_A 192 LLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLE 250 (315)
T ss_dssp EEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCC
T ss_pred EEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCC
Confidence 999874321 11100 014789999999999999999876643
No 136
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.57 E-value=5.1e-15 Score=118.53 Aligned_cols=106 Identities=13% Similarity=0.096 Sum_probs=85.9
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
.++.+|||+|||+|.++..+++..+ .+++++|+++.+++.|+++.... + ..++++++++|+.+. +...++||+|+
T Consensus 116 ~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~--~-~~~~v~~~~~d~~~~-~~~~~~fD~V~ 190 (312)
T 3vc1_A 116 GPDDTLVDAGCGRGGSMVMAHRRFG-SRVEGVTLSAAQADFGNRRAREL--R-IDDHVRSRVCNMLDT-PFDKGAVTASW 190 (312)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHC-CEEEEEESCHHHHHHHHHHHHHT--T-CTTTEEEEECCTTSC-CCCTTCEEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHHHHc--C-CCCceEEEECChhcC-CCCCCCEeEEE
Confidence 4567999999999999999887643 68999999999999999986542 1 124799999998753 33457999999
Q ss_pred ECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 136 TDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 136 ~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
+....++.. ...+++++.++|||||++++..
T Consensus 191 ~~~~l~~~~-----~~~~l~~~~~~LkpgG~l~~~~ 221 (312)
T 3vc1_A 191 NNESTMYVD-----LHDLFSEHSRFLKVGGRYVTIT 221 (312)
T ss_dssp EESCGGGSC-----HHHHHHHHHHHEEEEEEEEEEE
T ss_pred ECCchhhCC-----HHHHHHHHHHHcCCCcEEEEEE
Confidence 987665542 3789999999999999999875
No 137
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.57 E-value=6.4e-15 Score=113.59 Aligned_cols=106 Identities=15% Similarity=0.333 Sum_probs=83.9
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCC-CccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhc-------
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPS-VESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEH------- 127 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~-~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~------- 127 (197)
.++.+|||||||+|..+..+++..+ ..+++++|+++.+++.|++++... + ...+++++.+|+.+.++..
T Consensus 59 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~--g-~~~~v~~~~~d~~~~~~~~~~~~~~~ 135 (239)
T 2hnk_A 59 SGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKEN--G-LENKIFLKLGSALETLQVLIDSKSAP 135 (239)
T ss_dssp HTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHT--T-CGGGEEEEESCHHHHHHHHHHCSSCC
T ss_pred hCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc--C-CCCCEEEEECCHHHHHHHHHhhcccc
Confidence 3567999999999999999887654 579999999999999999987542 1 1235999999998865532
Q ss_pred --------C-CceeEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 128 --------Q-QEFDVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 128 --------~-~~~D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
. ++||+|+++... .. ...+++.+.++|+|||++++..
T Consensus 136 ~~~~~f~~~~~~fD~I~~~~~~---~~----~~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 136 SWASDFAFGPSSIDLFFLDADK---EN----YPNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp GGGTTTCCSTTCEEEEEECSCG---GG----HHHHHHHHHHHEEEEEEEEEEC
T ss_pred cccccccCCCCCcCEEEEeCCH---HH----HHHHHHHHHHHcCCCeEEEEEc
Confidence 2 789999998531 11 1578999999999999999864
No 138
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.57 E-value=1.1e-14 Score=118.59 Aligned_cols=114 Identities=18% Similarity=0.210 Sum_probs=88.1
Q ss_pred CCCCCeEEEEeCCchHhHHHHhcCC-CCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeE
Q psy4592 55 HPNPKKVLIVGGGDGGVAREVLKHP-SVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDV 133 (197)
Q Consensus 55 ~~~~~~vLdiG~G~G~~~~~l~~~~-~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~ 133 (197)
..++.+|||+|||+|.++.+++... +..+++++|+|+.+++.|++++... ++ .++++.++|+.+.. ...++||+
T Consensus 201 ~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~--g~--~~i~~~~~D~~~~~-~~~~~~D~ 275 (354)
T 3tma_A 201 ARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALAS--GL--SWIRFLRADARHLP-RFFPEVDR 275 (354)
T ss_dssp CCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHT--TC--TTCEEEECCGGGGG-GTCCCCSE
T ss_pred CCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHc--CC--CceEEEeCChhhCc-cccCCCCE
Confidence 3556799999999999999988764 5579999999999999999997652 11 27999999998753 33457899
Q ss_pred EEECCCCCCCCC--ccc--ccHHHHHHHHhhcCCCcEEEEEcCC
Q psy4592 134 IITDSSDPVGPA--ESL--FQASYFELMSRALRPGGIVCSQAGT 173 (197)
Q Consensus 134 I~~~~~~~~~~~--~~l--~~~~~~~~~~~~LkpgG~l~~~~~~ 173 (197)
|++|+|...... ..+ ....+++.+.++|+|||.+++.+..
T Consensus 276 Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~ 319 (354)
T 3tma_A 276 ILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLR 319 (354)
T ss_dssp EEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEESC
T ss_pred EEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 999998654322 111 0157889999999999999997654
No 139
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.57 E-value=5.1e-15 Score=115.48 Aligned_cols=101 Identities=19% Similarity=0.244 Sum_probs=81.6
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
+++.+|||+|||+|.++..+++.. .+++++|+++.+++.|+++.+ +++++++|+.+. +. .++||+|+
T Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~~~---------~~~~~~~d~~~~-~~-~~~fD~v~ 115 (263)
T 3pfg_A 49 PKAASLLDVACGTGMHLRHLADSF--GTVEGLELSADMLAIARRRNP---------DAVLHHGDMRDF-SL-GRRFSAVT 115 (263)
T ss_dssp TTCCEEEEETCTTSHHHHHHTTTS--SEEEEEESCHHHHHHHHHHCT---------TSEEEECCTTTC-CC-SCCEEEEE
T ss_pred CCCCcEEEeCCcCCHHHHHHHHcC--CeEEEEECCHHHHHHHHhhCC---------CCEEEECChHHC-Cc-cCCcCEEE
Confidence 455799999999999999998774 589999999999999999752 688999998763 22 57899999
Q ss_pred ECC-CCCCCCCcccccHHHHHHHHhhcCCCcEEEEE
Q psy4592 136 TDS-SDPVGPAESLFQASYFELMSRALRPGGIVCSQ 170 (197)
Q Consensus 136 ~~~-~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~ 170 (197)
+.. ..++.++..- ...++++++++|||||.+++.
T Consensus 116 ~~~~~l~~~~~~~~-~~~~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 116 CMFSSIGHLAGQAE-LDAALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp ECTTGGGGSCHHHH-HHHHHHHHHHTEEEEEEEEEC
T ss_pred EcCchhhhcCCHHH-HHHHHHHHHHhcCCCcEEEEE
Confidence 986 5555432111 157899999999999999995
No 140
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.56 E-value=1.3e-14 Score=111.31 Aligned_cols=102 Identities=17% Similarity=0.195 Sum_probs=80.8
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHH---HhhcCCcee
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRF---MSEHQQEFD 132 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~---~~~~~~~~D 132 (197)
.++.+|||+|||+|.++..+++..+..+++++|+++.+++.++++... .+++.++.+|+.+. .+. .++||
T Consensus 73 ~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~------~~~v~~~~~d~~~~~~~~~~-~~~~D 145 (230)
T 1fbn_A 73 KRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAE------RENIIPILGDANKPQEYANI-VEKVD 145 (230)
T ss_dssp CTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTT------CTTEEEEECCTTCGGGGTTT-SCCEE
T ss_pred CCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhc------CCCeEEEECCCCCccccccc-CccEE
Confidence 456799999999999999988765557999999999999999998754 26899999998752 122 26899
Q ss_pred EEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEE
Q psy4592 133 VIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQ 170 (197)
Q Consensus 133 ~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~ 170 (197)
+|+.+.+. +. ....+++++.+.|||||.+++.
T Consensus 146 ~v~~~~~~-----~~-~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 146 VIYEDVAQ-----PN-QAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp EEEECCCS-----TT-HHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEecCC-----hh-HHHHHHHHHHHhCCCCcEEEEE
Confidence 99966532 11 1256799999999999999985
No 141
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.56 E-value=8.2e-15 Score=110.22 Aligned_cols=103 Identities=11% Similarity=0.070 Sum_probs=82.8
Q ss_pred CCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEEE
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVIIT 136 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~~ 136 (197)
++.+|||+|||+|.++..++...+..+++++|+++.+++.++++.... ..+++++..+|+.+.. ..++||+|++
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~----~~~~v~~~~~d~~~~~--~~~~~D~i~~ 138 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHEL----KLENIEPVQSRVEEFP--SEPPFDGVIS 138 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHT----TCSSEEEEECCTTTSC--CCSCEEEEEC
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHc----CCCCeEEEecchhhCC--ccCCcCEEEE
Confidence 357999999999999999887656689999999999999999886542 2245999999987643 2468999998
Q ss_pred CCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEcCC
Q psy4592 137 DSSDPVGPAESLFQASYFELMSRALRPGGIVCSQAGT 173 (197)
Q Consensus 137 ~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~~~ 173 (197)
+.. .+ ...+++.+.++|+|||.+++..+.
T Consensus 139 ~~~----~~----~~~~l~~~~~~L~~gG~l~~~~~~ 167 (207)
T 1jsx_A 139 RAF----AS----LNDMVSWCHHLPGEQGRFYALKGQ 167 (207)
T ss_dssp SCS----SS----HHHHHHHHTTSEEEEEEEEEEESS
T ss_pred ecc----CC----HHHHHHHHHHhcCCCcEEEEEeCC
Confidence 653 11 167999999999999999987543
No 142
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.56 E-value=1.8e-14 Score=115.39 Aligned_cols=108 Identities=13% Similarity=0.119 Sum_probs=85.6
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
.++.+|||||||+|.++..+++..+ .+++++|+++++++.++++.... + ..+++++..+|+.+. +++||+|+
T Consensus 89 ~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~--~-~~~~v~~~~~d~~~~----~~~fD~v~ 160 (318)
T 2fk8_A 89 KPGMTLLDIGCGWGTTMRRAVERFD-VNVIGLTLSKNQHARCEQVLASI--D-TNRSRQVLLQGWEDF----AEPVDRIV 160 (318)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHC-CEEEEEESCHHHHHHHHHHHHTS--C-CSSCEEEEESCGGGC----CCCCSEEE
T ss_pred CCcCEEEEEcccchHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhc--C-CCCceEEEECChHHC----CCCcCEEE
Confidence 4567999999999999999887643 69999999999999999886542 1 124799999998653 27899999
Q ss_pred ECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEcCC
Q psy4592 136 TDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQAGT 173 (197)
Q Consensus 136 ~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~~~ 173 (197)
+....++.+... ...+++++.++|||||.+++....
T Consensus 161 ~~~~l~~~~~~~--~~~~l~~~~~~LkpgG~l~~~~~~ 196 (318)
T 2fk8_A 161 SIEAFEHFGHEN--YDDFFKRCFNIMPADGRMTVQSSV 196 (318)
T ss_dssp EESCGGGTCGGG--HHHHHHHHHHHSCTTCEEEEEEEE
T ss_pred EeChHHhcCHHH--HHHHHHHHHHhcCCCcEEEEEEec
Confidence 987765543221 278999999999999999987643
No 143
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.56 E-value=8.9e-15 Score=122.58 Aligned_cols=117 Identities=14% Similarity=0.062 Sum_probs=90.2
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCC-CCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHP-SVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVI 134 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~-~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I 134 (197)
.++.+|||+|||+|+.+..++... +...|+++|+++.+++.+++++... ...++.+.++|+.++.....++||+|
T Consensus 104 ~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~----g~~nv~v~~~Da~~l~~~~~~~FD~I 179 (456)
T 3m4x_A 104 KPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERW----GVSNAIVTNHAPAELVPHFSGFFDRI 179 (456)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHH----TCSSEEEECCCHHHHHHHHTTCEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHc----CCCceEEEeCCHHHhhhhccccCCEE
Confidence 456799999999999999988653 3369999999999999999987653 23479999999988654446789999
Q ss_pred EECCCCCCCC----Cccc--------------ccHHHHHHHHhhcCCCcEEEEEcCCCCc
Q psy4592 135 ITDSSDPVGP----AESL--------------FQASYFELMSRALRPGGIVCSQAGTLWY 176 (197)
Q Consensus 135 ~~~~~~~~~~----~~~l--------------~~~~~~~~~~~~LkpgG~l~~~~~~~~~ 176 (197)
++|+|..... ++.. ...++++.+.++|||||.+++.+++...
T Consensus 180 l~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~~ 239 (456)
T 3m4x_A 180 VVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFAP 239 (456)
T ss_dssp EEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCG
T ss_pred EECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeeccc
Confidence 9999853311 1100 1137899999999999999998876443
No 144
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.56 E-value=4.4e-15 Score=118.07 Aligned_cols=111 Identities=19% Similarity=0.231 Sum_probs=83.6
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
..+.+|||||||+|.++..+++.. .+++++|+++.+++.|++++...+.. ...+++++++|+.+. +. .++||+|+
T Consensus 81 ~~~~~vLDlGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~-~~~~v~~~~~d~~~~-~~-~~~fD~v~ 155 (299)
T 3g2m_A 81 PVSGPVLELAAGMGRLTFPFLDLG--WEVTALELSTSVLAAFRKRLAEAPAD-VRDRCTLVQGDMSAF-AL-DKRFGTVV 155 (299)
T ss_dssp CCCSCEEEETCTTTTTHHHHHTTT--CCEEEEESCHHHHHHHHHHHHTSCHH-HHTTEEEEECBTTBC-CC-SCCEEEEE
T ss_pred CCCCcEEEEeccCCHHHHHHHHcC--CeEEEEECCHHHHHHHHHHHhhcccc-cccceEEEeCchhcC-Cc-CCCcCEEE
Confidence 344599999999999999998873 68999999999999999987641000 005799999998763 32 57899998
Q ss_pred EC-CCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEcCC
Q psy4592 136 TD-SSDPVGPAESLFQASYFELMSRALRPGGIVCSQAGT 173 (197)
Q Consensus 136 ~~-~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~~~ 173 (197)
+. ...++.+... ...++++++++|||||.+++....
T Consensus 156 ~~~~~~~~~~~~~--~~~~l~~~~~~L~pgG~l~~~~~~ 192 (299)
T 3g2m_A 156 ISSGSINELDEAD--RRGLYASVREHLEPGGKFLLSLAM 192 (299)
T ss_dssp ECHHHHTTSCHHH--HHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ECCcccccCCHHH--HHHHHHHHHHHcCCCcEEEEEeec
Confidence 64 3233332211 167999999999999999998644
No 145
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.56 E-value=1.3e-14 Score=109.48 Aligned_cols=101 Identities=20% Similarity=0.228 Sum_probs=81.5
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
+++.+|||+|||+|.++..+++.. .+++++|+++.+++.+++++ ++++..+|+.+.. ..++||+|+
T Consensus 42 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~----------~~~~~~~d~~~~~--~~~~fD~v~ 107 (211)
T 3e23_A 42 PAGAKILELGCGAGYQAEAMLAAG--FDVDATDGSPELAAEASRRL----------GRPVRTMLFHQLD--AIDAYDAVW 107 (211)
T ss_dssp CTTCEEEESSCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHH----------TSCCEECCGGGCC--CCSCEEEEE
T ss_pred CCCCcEEEECCCCCHHHHHHHHcC--CeEEEECCCHHHHHHHHHhc----------CCceEEeeeccCC--CCCcEEEEE
Confidence 356799999999999999988773 69999999999999999875 2456778876533 467999999
Q ss_pred ECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEcC
Q psy4592 136 TDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQAG 172 (197)
Q Consensus 136 ~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~~ 172 (197)
+....++.+... ...++++++++|||||++++...
T Consensus 108 ~~~~l~~~~~~~--~~~~l~~~~~~LkpgG~l~~~~~ 142 (211)
T 3e23_A 108 AHACLLHVPRDE--LADVLKLIWRALKPGGLFYASYK 142 (211)
T ss_dssp ECSCGGGSCHHH--HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ecCchhhcCHHH--HHHHHHHHHHhcCCCcEEEEEEc
Confidence 988766554211 16799999999999999999753
No 146
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.56 E-value=4.4e-14 Score=111.33 Aligned_cols=109 Identities=16% Similarity=0.079 Sum_probs=86.0
Q ss_pred CCCeEEEEeCCc---hHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHH---------
Q psy4592 57 NPKKVLIVGGGD---GGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFM--------- 124 (197)
Q Consensus 57 ~~~~vLdiG~G~---G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~--------- 124 (197)
...+|||||||+ |.++..+.+..+..+++++|+||.|++.|++++.. .++++++.+|+.+..
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~------~~~v~~~~~D~~~~~~~~~~~~~~ 150 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAK------DPNTAVFTADVRDPEYILNHPDVR 150 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTT------CTTEEEEECCTTCHHHHHHSHHHH
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCC------CCCeEEEEeeCCCchhhhccchhh
Confidence 347999999999 98876666655668999999999999999998752 358999999987531
Q ss_pred h-hcCCceeEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEcCC
Q psy4592 125 S-EHQQEFDVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQAGT 173 (197)
Q Consensus 125 ~-~~~~~~D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~~~ 173 (197)
. ...++||+|++....|+.++.. ...++++++++|+|||+|++....
T Consensus 151 ~~~d~~~~d~v~~~~vlh~~~d~~--~~~~l~~~~~~L~pGG~l~i~~~~ 198 (274)
T 2qe6_A 151 RMIDFSRPAAIMLVGMLHYLSPDV--VDRVVGAYRDALAPGSYLFMTSLV 198 (274)
T ss_dssp HHCCTTSCCEEEETTTGGGSCTTT--HHHHHHHHHHHSCTTCEEEEEEEB
T ss_pred ccCCCCCCEEEEEechhhhCCcHH--HHHHHHHHHHhCCCCcEEEEEEec
Confidence 1 1124799999998887766531 278999999999999999987643
No 147
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.56 E-value=7e-15 Score=116.65 Aligned_cols=110 Identities=16% Similarity=0.170 Sum_probs=79.4
Q ss_pred CCCeEEEEeCCchHhHHHHh----cCCCCccE--EEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHh-----
Q psy4592 57 NPKKVLIVGGGDGGVAREVL----KHPSVESA--YLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMS----- 125 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~----~~~~~~~v--~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~----- 125 (197)
++.+|||||||+|.++..++ ...+...+ +++|+|++|++.|++.+... .+....++.+..+++.+...
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~ 130 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKT-SNLENVKFAWHKETSSEYQSRMLEK 130 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTC-SSCTTEEEEEECSCHHHHHHHHHTT
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhc-cCCCcceEEEEecchhhhhhhhccc
Confidence 45699999999997664332 22233444 99999999999999876421 01111234456777765432
Q ss_pred hcCCceeEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 126 EHQQEFDVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 126 ~~~~~~D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
..+++||+|++....++.++. ...+++++++|||||.+++..
T Consensus 131 ~~~~~fD~V~~~~~l~~~~d~----~~~l~~~~r~LkpgG~l~i~~ 172 (292)
T 2aot_A 131 KELQKWDFIHMIQMLYYVKDI----PATLKFFHSLLGTNAKMLIIV 172 (292)
T ss_dssp TCCCCEEEEEEESCGGGCSCH----HHHHHHHHHTEEEEEEEEEEE
T ss_pred cCCCceeEEEEeeeeeecCCH----HHHHHHHHHHcCCCcEEEEEE
Confidence 235789999999988887765 789999999999999999864
No 148
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.56 E-value=7.6e-15 Score=115.62 Aligned_cols=117 Identities=20% Similarity=0.277 Sum_probs=90.2
Q ss_pred CCCCeEEEEeCCchHhHHHHhcC-CCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKH-PSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVI 134 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~-~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I 134 (197)
.++.+|||+|||+|.++..+++. .+..+++++|+++.+++.|++++... + ..+++++..+|+.+.+ ..++||+|
T Consensus 111 ~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~--~-~~~~v~~~~~d~~~~~--~~~~~D~V 185 (277)
T 1o54_A 111 KEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKW--G-LIERVTIKVRDISEGF--DEKDVDAL 185 (277)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHT--T-CGGGEEEECCCGGGCC--SCCSEEEE
T ss_pred CCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHc--C-CCCCEEEEECCHHHcc--cCCccCEE
Confidence 45679999999999999998876 55579999999999999999987542 1 1247999999987652 24689999
Q ss_pred EECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEcCCCCcChhHHHHHHHHHHh
Q psy4592 135 ITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQAGTLWYSLDCVGNTLQHCAS 190 (197)
Q Consensus 135 ~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~ 190 (197)
+++++. + ..+++++.++|+|||.+++...+ .+....+.+.+++
T Consensus 186 ~~~~~~-----~----~~~l~~~~~~L~pgG~l~~~~~~----~~~~~~~~~~l~~ 228 (277)
T 1o54_A 186 FLDVPD-----P----WNYIDKCWEALKGGGRFATVCPT----TNQVQETLKKLQE 228 (277)
T ss_dssp EECCSC-----G----GGTHHHHHHHEEEEEEEEEEESS----HHHHHHHHHHHHH
T ss_pred EECCcC-----H----HHHHHHHHHHcCCCCEEEEEeCC----HHHHHHHHHHHHH
Confidence 998742 2 35789999999999999997643 2445555555554
No 149
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.56 E-value=4.6e-16 Score=119.92 Aligned_cols=103 Identities=14% Similarity=0.071 Sum_probs=79.8
Q ss_pred CCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEEE
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVIIT 136 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~~ 136 (197)
++.+|||+|||+|.++..+++.. .+++++|+++.+++.|++++... + ..++++++++|+.+.. ..++||+|++
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~~--~~v~~vD~s~~~~~~a~~~~~~~--~-~~~~~~~~~~d~~~~~--~~~~~D~v~~ 150 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALTG--MRVIAIDIDPVKIALARNNAEVY--G-IADKIEFICGDFLLLA--SFLKADVVFL 150 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHT--T-CGGGEEEEESCHHHHG--GGCCCSEEEE
T ss_pred CCCEEEECccccCHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHHc--C-CCcCeEEEECChHHhc--ccCCCCEEEE
Confidence 56799999999999999999874 79999999999999999987642 1 1147999999998865 3478999999
Q ss_pred CCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEE
Q psy4592 137 DSSDPVGPAESLFQASYFELMSRALRPGGIVCSQ 170 (197)
Q Consensus 137 ~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~ 170 (197)
+++.+...... ..+.+++++|+|||.+++.
T Consensus 151 ~~~~~~~~~~~----~~~~~~~~~L~pgG~~i~~ 180 (241)
T 3gdh_A 151 SPPWGGPDYAT----AETFDIRTMMSPDGFEIFR 180 (241)
T ss_dssp CCCCSSGGGGG----SSSBCTTTSCSSCHHHHHH
T ss_pred CCCcCCcchhh----hHHHHHHhhcCCcceeHHH
Confidence 99876643321 1334567778888876553
No 150
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.56 E-value=8.4e-15 Score=115.34 Aligned_cols=118 Identities=17% Similarity=0.218 Sum_probs=90.2
Q ss_pred CCCCeEEEEeCCchHhHHHHhcC-CCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKH-PSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVI 134 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~-~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I 134 (197)
.++.+|||+|||+|.++..+++. .+..+++++|+++.+++.|++++.... ..++++++.+|+.+.+ ..++||+|
T Consensus 109 ~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~---g~~~v~~~~~d~~~~~--~~~~fD~V 183 (275)
T 1yb2_A 109 RPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFY---DIGNVRTSRSDIADFI--SDQMYDAV 183 (275)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTS---CCTTEEEECSCTTTCC--CSCCEEEE
T ss_pred CCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcC---CCCcEEEEECchhccC--cCCCccEE
Confidence 45679999999999999998876 455799999999999999999875410 1257999999987622 34689999
Q ss_pred EECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEcCCCCcChhHHHHHHHHHHhh
Q psy4592 135 ITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQAGTLWYSLDCVGNTLQHCASV 191 (197)
Q Consensus 135 ~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~ 191 (197)
+++++ +. ..+++++.++|||||.+++.... ......+.+.+++.
T Consensus 184 i~~~~-----~~----~~~l~~~~~~LkpgG~l~i~~~~----~~~~~~~~~~l~~~ 227 (275)
T 1yb2_A 184 IADIP-----DP----WNHVQKIASMMKPGSVATFYLPN----FDQSEKTVLSLSAS 227 (275)
T ss_dssp EECCS-----CG----GGSHHHHHHTEEEEEEEEEEESS----HHHHHHHHHHSGGG
T ss_pred EEcCc-----CH----HHHHHHHHHHcCCCCEEEEEeCC----HHHHHHHHHHHHHC
Confidence 99764 22 45889999999999999997644 23455555555543
No 151
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.55 E-value=1.9e-15 Score=115.89 Aligned_cols=110 Identities=8% Similarity=-0.097 Sum_probs=80.1
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcC-HHHHHHH---HhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCce
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEID-NRVIEVS---KKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEF 131 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~-~~~~~~a---~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 131 (197)
.++.+|||||||+|.++..+++..+..++++||++ +.|++.| +++.... ..+++.+..+|+.+......+.+
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~----~~~~v~~~~~d~~~l~~~~~d~v 98 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKG----GLSNVVFVIAAAESLPFELKNIA 98 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGT----CCSSEEEECCBTTBCCGGGTTCE
T ss_pred CCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHc----CCCCeEEEEcCHHHhhhhccCeE
Confidence 45679999999999999998866566899999999 7777776 6654431 23579999999887522224678
Q ss_pred eEEEECCCCCCC-CCcccccHHHHHHHHhhcCCCcEEEE
Q psy4592 132 DVIITDSSDPVG-PAESLFQASYFELMSRALRPGGIVCS 169 (197)
Q Consensus 132 D~I~~~~~~~~~-~~~~l~~~~~~~~~~~~LkpgG~l~~ 169 (197)
|.|+++.+.+.. .........++++++++|||||++++
T Consensus 99 ~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 99 DSISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp EEEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEE
T ss_pred EEEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEE
Confidence 888887753221 00001125789999999999999998
No 152
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.55 E-value=1.6e-14 Score=108.99 Aligned_cols=99 Identities=21% Similarity=0.216 Sum_probs=81.5
Q ss_pred CCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEEE
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVIIT 136 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~~ 136 (197)
++.+|||+|||+|.++..+ +..+++++|+++.+++.++++. ++++++++|+.+ ++...++||+|++
T Consensus 36 ~~~~vLdiG~G~G~~~~~l----~~~~v~~vD~s~~~~~~a~~~~---------~~~~~~~~d~~~-~~~~~~~fD~v~~ 101 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL----PYPQKVGVEPSEAMLAVGRRRA---------PEATWVRAWGEA-LPFPGESFDVVLL 101 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC----CCSEEEEECCCHHHHHHHHHHC---------TTSEEECCCTTS-CCSCSSCEEEEEE
T ss_pred CCCeEEEECCCCCHhHHhC----CCCeEEEEeCCHHHHHHHHHhC---------CCcEEEEccccc-CCCCCCcEEEEEE
Confidence 6679999999999998876 3238999999999999999875 357889999765 3334568999999
Q ss_pred CCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEcCC
Q psy4592 137 DSSDPVGPAESLFQASYFELMSRALRPGGIVCSQAGT 173 (197)
Q Consensus 137 ~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~~~ 173 (197)
....++.++. ..+++++.++|||||.+++....
T Consensus 102 ~~~l~~~~~~----~~~l~~~~~~L~pgG~l~i~~~~ 134 (211)
T 2gs9_A 102 FTTLEFVEDV----ERVLLEARRVLRPGGALVVGVLE 134 (211)
T ss_dssp ESCTTTCSCH----HHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cChhhhcCCH----HHHHHHHHHHcCCCCEEEEEecC
Confidence 8877666544 78999999999999999997644
No 153
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.55 E-value=2.2e-14 Score=105.13 Aligned_cols=96 Identities=15% Similarity=0.188 Sum_probs=74.9
Q ss_pred CCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEEE
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVIIT 136 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~~ 136 (197)
++.+|||+|||+|.++..+++.. +++++|+++.+++. . ++++++++|+.+.. ..++||+|++
T Consensus 23 ~~~~vLD~GcG~G~~~~~l~~~~---~v~gvD~s~~~~~~------~-------~~~~~~~~d~~~~~--~~~~fD~i~~ 84 (170)
T 3q87_B 23 EMKIVLDLGTSTGVITEQLRKRN---TVVSTDLNIRALES------H-------RGGNLVRADLLCSI--NQESVDVVVF 84 (170)
T ss_dssp CSCEEEEETCTTCHHHHHHTTTS---EEEEEESCHHHHHT------C-------SSSCEEECSTTTTB--CGGGCSEEEE
T ss_pred CCCeEEEeccCccHHHHHHHhcC---cEEEEECCHHHHhc------c-------cCCeEEECChhhhc--ccCCCCEEEE
Confidence 45699999999999999998775 99999999999887 1 35789999987632 2378999999
Q ss_pred CCCCCCCCCcc-----cccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 137 DSSDPVGPAES-----LFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 137 ~~~~~~~~~~~-----l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
+++.+...+.. ....++++++.+.| |||.+++..
T Consensus 85 n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~ 123 (170)
T 3q87_B 85 NPPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLV 123 (170)
T ss_dssp CCCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEE
T ss_pred CCCCccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEE
Confidence 99876543320 00145788888888 999999865
No 154
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.55 E-value=6.8e-15 Score=113.09 Aligned_cols=105 Identities=17% Similarity=0.178 Sum_probs=81.6
Q ss_pred CCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEEE
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVIIT 136 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~~ 136 (197)
++.+|||+|||+|.++..+++. .+++++|+++.+++.|+++... ...+++++++|+.+. +. .++||+|++
T Consensus 33 ~~~~vLdiG~G~G~~~~~l~~~---~~v~~vD~s~~~~~~a~~~~~~-----~~~~~~~~~~d~~~~-~~-~~~fD~v~~ 102 (243)
T 3d2l_A 33 PGKRIADIGCGTGTATLLLADH---YEVTGVDLSEEMLEIAQEKAME-----TNRHVDFWVQDMREL-EL-PEPVDAITI 102 (243)
T ss_dssp TTCEEEEESCTTCHHHHHHTTT---SEEEEEESCHHHHHHHHHHHHH-----TTCCCEEEECCGGGC-CC-SSCEEEEEE
T ss_pred CCCeEEEecCCCCHHHHHHhhC---CeEEEEECCHHHHHHHHHhhhh-----cCCceEEEEcChhhc-CC-CCCcCEEEE
Confidence 4579999999999999988866 6999999999999999988654 235789999998763 22 378999998
Q ss_pred CC-CCCCCCCcccccHHHHHHHHhhcCCCcEEEEEcC
Q psy4592 137 DS-SDPVGPAESLFQASYFELMSRALRPGGIVCSQAG 172 (197)
Q Consensus 137 ~~-~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~~ 172 (197)
.. ..++..+.. ....+++++.++|+|||.+++...
T Consensus 103 ~~~~~~~~~~~~-~~~~~l~~~~~~L~pgG~l~~~~~ 138 (243)
T 3d2l_A 103 LCDSLNYLQTEA-DVKQTFDSAARLLTDGGKLLFDVH 138 (243)
T ss_dssp CTTGGGGCCSHH-HHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred eCCchhhcCCHH-HHHHHHHHHHHhcCCCeEEEEEcC
Confidence 75 433332211 126789999999999999998653
No 155
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.55 E-value=1.2e-14 Score=113.46 Aligned_cols=99 Identities=17% Similarity=0.167 Sum_probs=81.0
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
.++.+|||+|||+|.++..+++. ..+++++|+++.+++.++++ .+++++++|+.+ ++...++||+|+
T Consensus 33 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~----------~~~~~~~~d~~~-~~~~~~~fD~v~ 99 (261)
T 3ege_A 33 PKGSVIADIGAGTGGYSVALANQ--GLFVYAVEPSIVMRQQAVVH----------PQVEWFTGYAEN-LALPDKSVDGVI 99 (261)
T ss_dssp CTTCEEEEETCTTSHHHHHHHTT--TCEEEEECSCHHHHHSSCCC----------TTEEEECCCTTS-CCSCTTCBSEEE
T ss_pred CCCCEEEEEcCcccHHHHHHHhC--CCEEEEEeCCHHHHHHHHhc----------cCCEEEECchhh-CCCCCCCEeEEE
Confidence 46689999999999999999874 37999999999998876553 279999999876 344467999999
Q ss_pred ECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEcC
Q psy4592 136 TDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQAG 172 (197)
Q Consensus 136 ~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~~ 172 (197)
+....++.++. ..++++++++|| ||.+++...
T Consensus 100 ~~~~l~~~~~~----~~~l~~~~~~Lk-gG~~~~~~~ 131 (261)
T 3ege_A 100 SILAIHHFSHL----EKSFQEMQRIIR-DGTIVLLTF 131 (261)
T ss_dssp EESCGGGCSSH----HHHHHHHHHHBC-SSCEEEEEE
T ss_pred EcchHhhccCH----HHHHHHHHHHhC-CcEEEEEEc
Confidence 99877666554 789999999999 997776653
No 156
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.55 E-value=4.7e-15 Score=116.81 Aligned_cols=102 Identities=12% Similarity=0.068 Sum_probs=83.4
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
+++.+|||+|||+|.++..+++.+. .+|+++|+||..++.+++|+... ++ ..+++++++|++++.. .+.||.|+
T Consensus 124 ~~g~~VlD~~aG~G~~~i~~a~~g~-~~V~avD~np~a~~~~~~N~~~N--~v-~~~v~~~~~D~~~~~~--~~~~D~Vi 197 (278)
T 3k6r_A 124 KPDELVVDMFAGIGHLSLPIAVYGK-AKVIAIEKDPYTFKFLVENIHLN--KV-EDRMSAYNMDNRDFPG--ENIADRIL 197 (278)
T ss_dssp CTTCEEEETTCTTTTTTHHHHHHTC-CEEEEECCCHHHHHHHHHHHHHT--TC-TTTEEEECSCTTTCCC--CSCEEEEE
T ss_pred CCCCEEEEecCcCcHHHHHHHHhcC-CeEEEEECCHHHHHHHHHHHHHc--CC-CCcEEEEeCcHHHhcc--ccCCCEEE
Confidence 5678999999999999999887743 68999999999999999998753 22 3579999999987543 46899999
Q ss_pred ECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 136 TDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 136 ~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
+++|.. ..+++..+.++||+||++.+..
T Consensus 198 ~~~p~~--------~~~~l~~a~~~lk~gG~ih~~~ 225 (278)
T 3k6r_A 198 MGYVVR--------THEFIPKALSIAKDGAIIHYHN 225 (278)
T ss_dssp ECCCSS--------GGGGHHHHHHHEEEEEEEEEEE
T ss_pred ECCCCc--------HHHHHHHHHHHcCCCCEEEEEe
Confidence 998621 1458889999999999987654
No 157
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.54 E-value=7.7e-15 Score=113.63 Aligned_cols=106 Identities=18% Similarity=0.267 Sum_probs=81.7
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
+++.+|||+|||+|.++..+++.. .+++++|+++.+++.|+++... ...+++++++|+.+. +. .++||+|+
T Consensus 40 ~~~~~vLDlGcG~G~~~~~l~~~~--~~v~gvD~s~~~l~~a~~~~~~-----~~~~v~~~~~d~~~~-~~-~~~fD~v~ 110 (252)
T 1wzn_A 40 REVRRVLDLACGTGIPTLELAERG--YEVVGLDLHEEMLRVARRKAKE-----RNLKIEFLQGDVLEI-AF-KNEFDAVT 110 (252)
T ss_dssp SCCCEEEEETCTTCHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHH-----TTCCCEEEESCGGGC-CC-CSCEEEEE
T ss_pred cCCCEEEEeCCCCCHHHHHHHHCC--CeEEEEECCHHHHHHHHHHHHh-----cCCceEEEECChhhc-cc-CCCccEEE
Confidence 456799999999999999988773 6999999999999999988754 234799999998763 22 36899999
Q ss_pred ECCCC-CCCCCcccccHHHHHHHHhhcCCCcEEEEEcC
Q psy4592 136 TDSSD-PVGPAESLFQASYFELMSRALRPGGIVCSQAG 172 (197)
Q Consensus 136 ~~~~~-~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~~ 172 (197)
+.... +..+... ...+++++.++|+|||.+++...
T Consensus 111 ~~~~~~~~~~~~~--~~~~l~~~~~~L~pgG~li~~~~ 146 (252)
T 1wzn_A 111 MFFSTIMYFDEED--LRKLFSKVAEALKPGGVFITDFP 146 (252)
T ss_dssp ECSSGGGGSCHHH--HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EcCCchhcCCHHH--HHHHHHHHHHHcCCCeEEEEecc
Confidence 86432 2211111 26789999999999999998653
No 158
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.54 E-value=1.1e-14 Score=106.07 Aligned_cols=121 Identities=14% Similarity=0.144 Sum_probs=85.4
Q ss_pred CCCCeEEEEeCCchHhHHHHhcC-CCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHH-----h--hc
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKH-PSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFM-----S--EH 127 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~-~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~-----~--~~ 127 (197)
.++.+|||+|||+|.++..+++. .+..+++++|+++ +++ .+++++..+|+.+.. + ..
T Consensus 21 ~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~--------------~~~~~~~~~d~~~~~~~~~~~~~~~ 85 (180)
T 1ej0_A 21 KPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDP--------------IVGVDFLQGDFRDELVMKALLERVG 85 (180)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCC--------------CTTEEEEESCTTSHHHHHHHHHHHT
T ss_pred CCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-ccc--------------cCcEEEEEcccccchhhhhhhccCC
Confidence 45679999999999999998876 3447999999999 632 146889999987642 1 23
Q ss_pred CCceeEEEECCCCCCCCCccccc-------HHHHHHHHhhcCCCcEEEEEcCCCCcChhHHHHHHHHHHhhCCcc
Q psy4592 128 QQEFDVIITDSSDPVGPAESLFQ-------ASYFELMSRALRPGGIVCSQAGTLWYSLDCVGNTLQHCASVFPRL 195 (197)
Q Consensus 128 ~~~~D~I~~~~~~~~~~~~~l~~-------~~~~~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~f~~v 195 (197)
.++||+|+++++.++........ ..+++++.++|+|||.+++..... .....+.+.++..|..+
T Consensus 86 ~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~----~~~~~~~~~~~~~~~~~ 156 (180)
T 1ej0_A 86 DSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQG----EGFDEYLREIRSLFTKV 156 (180)
T ss_dssp TCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESS----TTHHHHHHHHHHHEEEE
T ss_pred CCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecC----CcHHHHHHHHHHhhhhE
Confidence 46899999998876654321111 478999999999999999865332 22344444444445443
No 159
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.54 E-value=5.5e-15 Score=113.59 Aligned_cols=106 Identities=14% Similarity=0.202 Sum_probs=83.9
Q ss_pred CCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEEE
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVIIT 136 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~~ 136 (197)
++.+|||+|||+|.++..+++.. .+++++|+++.+++.++++.... ..+++++++|+.+. +. .++||+|++
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~~--~~~~~~D~s~~~~~~a~~~~~~~-----~~~~~~~~~d~~~~-~~-~~~fD~v~~ 107 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPKF--KNTWAVDLSQEMLSEAENKFRSQ-----GLKPRLACQDISNL-NI-NRKFDLITC 107 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGGS--SEEEEECSCHHHHHHHHHHHHHT-----TCCCEEECCCGGGC-CC-SCCEEEEEE
T ss_pred CCCeEEEeCCCCCHHHHHHHHCC--CcEEEEECCHHHHHHHHHHHhhc-----CCCeEEEecccccC-Cc-cCCceEEEE
Confidence 56799999999999999988773 68999999999999999887541 23789999998763 22 278999999
Q ss_pred CC-CCCCCCCcccccHHHHHHHHhhcCCCcEEEEEcC
Q psy4592 137 DS-SDPVGPAESLFQASYFELMSRALRPGGIVCSQAG 172 (197)
Q Consensus 137 ~~-~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~~ 172 (197)
.. ..++.+...- ...++++++++|||||.+++...
T Consensus 108 ~~~~l~~~~~~~~-~~~~l~~~~~~L~pgG~l~~~~~ 143 (246)
T 1y8c_A 108 CLDSTNYIIDSDD-LKKYFKAVSNHLKEGGVFIFDIN 143 (246)
T ss_dssp CTTGGGGCCSHHH-HHHHHHHHHTTEEEEEEEEEEEE
T ss_pred cCccccccCCHHH-HHHHHHHHHHhcCCCcEEEEEec
Confidence 87 6555432111 26799999999999999998653
No 160
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.54 E-value=2.7e-14 Score=117.40 Aligned_cols=110 Identities=16% Similarity=0.142 Sum_probs=81.0
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCC-----CCCCCCCCeEEEEcchHHHHhhc-CC
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGM-----AVGLSDPRLTVHVGDGFRFMSEH-QQ 129 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~-----~~~~~~~~~~~~~~d~~~~~~~~-~~ 129 (197)
.++.+|||||||+|.++..++...+..+++|||+++.+++.|+++.... ..++...+++++++|+.+..... -.
T Consensus 172 ~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~lp~~d~~~ 251 (438)
T 3uwp_A 172 TDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSEEWRERIA 251 (438)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTSHHHHHHHH
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccCCccccccC
Confidence 5668999999999999999886555446999999999999998753110 01112358999999987643211 14
Q ss_pred ceeEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEE
Q psy4592 130 EFDVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQ 170 (197)
Q Consensus 130 ~~D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~ 170 (197)
.||+|+++.+.+. ++. ...+.++++.|||||+|++.
T Consensus 252 ~aDVVf~Nn~~F~-pdl----~~aL~Ei~RvLKPGGrIVss 287 (438)
T 3uwp_A 252 NTSVIFVNNFAFG-PEV----DHQLKERFANMKEGGRIVSS 287 (438)
T ss_dssp TCSEEEECCTTCC-HHH----HHHHHHHHTTSCTTCEEEES
T ss_pred CccEEEEcccccC-chH----HHHHHHHHHcCCCCcEEEEe
Confidence 6999999876532 222 56778899999999999985
No 161
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.54 E-value=1.2e-14 Score=111.56 Aligned_cols=104 Identities=19% Similarity=0.129 Sum_probs=80.2
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCC-CCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHH--hhcCCcee
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHP-SVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFM--SEHQQEFD 132 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~-~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~~~D 132 (197)
.++.+|||+|||+|.++..+++.. +..+++++|+++.+++.+.++... .++++++++|+.+.. +...++||
T Consensus 76 ~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~------~~~v~~~~~d~~~~~~~~~~~~~~D 149 (233)
T 2ipx_A 76 KPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKK------RTNIIPVIEDARHPHKYRMLIAMVD 149 (233)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHH------CTTEEEECSCTTCGGGGGGGCCCEE
T ss_pred CCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhc------cCCeEEEEcccCChhhhcccCCcEE
Confidence 456799999999999999988763 447999999999887776665542 257999999987632 33357899
Q ss_pred EEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 133 VIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 133 ~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
+|+++++ .+.. ...+++++.++|||||.+++..
T Consensus 150 ~V~~~~~---~~~~---~~~~~~~~~~~LkpgG~l~i~~ 182 (233)
T 2ipx_A 150 VIFADVA---QPDQ---TRIVALNAHTFLRNGGHFVISI 182 (233)
T ss_dssp EEEECCC---CTTH---HHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEcCC---CccH---HHHHHHHHHHHcCCCeEEEEEE
Confidence 9999876 1111 1456888999999999999854
No 162
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.54 E-value=4.4e-15 Score=109.96 Aligned_cols=104 Identities=13% Similarity=0.027 Sum_probs=79.5
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
+.+.+|||+|||+|.++..+....+..+++++|+|+.|++.+++++... +...++..+|..+.. ..++||+|+
T Consensus 48 ~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~-----g~~~~v~~~d~~~~~--~~~~~DvVL 120 (200)
T 3fzg_A 48 KHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKL-----KTTIKYRFLNKESDV--YKGTYDVVF 120 (200)
T ss_dssp CCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHS-----CCSSEEEEECCHHHH--TTSEEEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhc-----CCCccEEEecccccC--CCCCcChhh
Confidence 4578999999999999999988777789999999999999999997652 222234446765543 357899999
Q ss_pred ECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEE
Q psy4592 136 TDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQ 170 (197)
Q Consensus 136 ~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~ 170 (197)
+.-..|...+. +..+..+.+.|+|||+++-.
T Consensus 121 a~k~LHlL~~~----~~al~~v~~~L~pggvfISf 151 (200)
T 3fzg_A 121 LLKMLPVLKQQ----DVNILDFLQLFHTQNFVISF 151 (200)
T ss_dssp EETCHHHHHHT----TCCHHHHHHTCEEEEEEEEE
T ss_pred HhhHHHhhhhh----HHHHHHHHHHhCCCCEEEEe
Confidence 98876665221 23445899999999998864
No 163
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.54 E-value=1.4e-14 Score=112.49 Aligned_cols=119 Identities=13% Similarity=0.128 Sum_probs=91.2
Q ss_pred CCCCeEEEEeCCchHhHHHHhcC-CCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKH-PSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVI 134 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~-~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I 134 (197)
.++.+|||+|||+|.++..+++. .+..+++++|+++.+++.|++++.... + .+++++..+|+.+. +...++||+|
T Consensus 95 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~-g--~~~v~~~~~d~~~~-~~~~~~~D~v 170 (258)
T 2pwy_A 95 APGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFW-Q--VENVRFHLGKLEEA-ELEEAAYDGV 170 (258)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHC-C--CCCEEEEESCGGGC-CCCTTCEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhc-C--CCCEEEEECchhhc-CCCCCCcCEE
Confidence 45679999999999999998876 445799999999999999999865310 1 25799999998764 2234689999
Q ss_pred EECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEcCCCCcChhHHHHHHHHHHhh
Q psy4592 135 ITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQAGTLWYSLDCVGNTLQHCASV 191 (197)
Q Consensus 135 ~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~ 191 (197)
+++++ +. ..+++++.++|+|||.+++...+ .+...++.+.+++.
T Consensus 171 ~~~~~-----~~----~~~l~~~~~~L~~gG~l~~~~~~----~~~~~~~~~~l~~~ 214 (258)
T 2pwy_A 171 ALDLM-----EP----WKVLEKAALALKPDRFLVAYLPN----ITQVLELVRAAEAH 214 (258)
T ss_dssp EEESS-----CG----GGGHHHHHHHEEEEEEEEEEESC----HHHHHHHHHHHTTT
T ss_pred EECCc-----CH----HHHHHHHHHhCCCCCEEEEEeCC----HHHHHHHHHHHHHC
Confidence 99764 22 35889999999999999997644 34556666666543
No 164
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.54 E-value=3.1e-14 Score=111.27 Aligned_cols=106 Identities=15% Similarity=0.112 Sum_probs=77.3
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHH-HHhhcCCceeEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFR-FMSEHQQEFDVI 134 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~D~I 134 (197)
.++.+|||||||+|.++..+++.. .+|+++|+|+.|++.|+++... . .+.....++.. ......++||+|
T Consensus 44 ~~g~~VLDlGcGtG~~a~~La~~g--~~V~gvD~S~~ml~~Ar~~~~~-----~--~v~~~~~~~~~~~~~~~~~~fD~V 114 (261)
T 3iv6_A 44 VPGSTVAVIGASTRFLIEKALERG--ASVTVFDFSQRMCDDLAEALAD-----R--CVTIDLLDITAEIPKELAGHFDFV 114 (261)
T ss_dssp CTTCEEEEECTTCHHHHHHHHHTT--CEEEEEESCHHHHHHHHHHTSS-----S--CCEEEECCTTSCCCGGGTTCCSEE
T ss_pred CCcCEEEEEeCcchHHHHHHHhcC--CEEEEEECCHHHHHHHHHHHHh-----c--cceeeeeecccccccccCCCccEE
Confidence 566799999999999999998874 6999999999999999998764 1 23332233211 001124689999
Q ss_pred EECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEcCC
Q psy4592 135 ITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQAGT 173 (197)
Q Consensus 135 ~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~~~ 173 (197)
+++...++..... ....++++.++| |||.++++...
T Consensus 115 v~~~~l~~~~~~~--~~~~l~~l~~lL-PGG~l~lS~~~ 150 (261)
T 3iv6_A 115 LNDRLINRFTTEE--ARRACLGMLSLV-GSGTVRASVKL 150 (261)
T ss_dssp EEESCGGGSCHHH--HHHHHHHHHHHH-TTSEEEEEEEB
T ss_pred EEhhhhHhCCHHH--HHHHHHHHHHhC-cCcEEEEEecc
Confidence 9988765443222 156899999999 99999997643
No 165
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.54 E-value=7.7e-15 Score=109.97 Aligned_cols=101 Identities=14% Similarity=0.182 Sum_probs=79.8
Q ss_pred eEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEEECCC
Q psy4592 60 KVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVIITDSS 139 (197)
Q Consensus 60 ~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~~~~~ 139 (197)
+|||+|||+|.++..+++.. .+++++|+++.+++.++++.... ..++++.++|+.+. +...++||+|++...
T Consensus 32 ~vLdiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~~~d~~~~-~~~~~~fD~v~~~~~ 103 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASLG--YEVTAVDQSSVGLAKAKQLAQEK-----GVKITTVQSNLADF-DIVADAWEGIVSIFC 103 (202)
T ss_dssp EEEECCCSCTHHHHHHHTTT--CEEEEECSSHHHHHHHHHHHHHH-----TCCEEEECCBTTTB-SCCTTTCSEEEEECC
T ss_pred CEEEECCCCCHhHHHHHhCC--CeEEEEECCHHHHHHHHHHHHhc-----CCceEEEEcChhhc-CCCcCCccEEEEEhh
Confidence 99999999999999988763 69999999999999999886541 23789999998663 333578999998542
Q ss_pred CCCCCCcccccHHHHHHHHhhcCCCcEEEEEcC
Q psy4592 140 DPVGPAESLFQASYFELMSRALRPGGIVCSQAG 172 (197)
Q Consensus 140 ~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~~ 172 (197)
+.. .. ....+++++.++|||||.+++...
T Consensus 104 -~~~-~~--~~~~~l~~~~~~L~pgG~l~~~~~ 132 (202)
T 2kw5_A 104 -HLP-SS--LRQQLYPKVYQGLKPGGVFILEGF 132 (202)
T ss_dssp -CCC-HH--HHHHHHHHHHTTCCSSEEEEEEEE
T ss_pred -cCC-HH--HHHHHHHHHHHhcCCCcEEEEEEe
Confidence 221 11 126799999999999999999863
No 166
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.54 E-value=1.3e-14 Score=118.17 Aligned_cols=109 Identities=19% Similarity=0.178 Sum_probs=83.4
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
.++++|||+|||+|.++..+++. +..+++++|+++ +++.|+++.... + ..++++++++|+.+. +.+.++||+|+
T Consensus 65 ~~~~~VLDvGcG~G~~~~~la~~-g~~~v~gvD~s~-~l~~a~~~~~~~--~-~~~~v~~~~~d~~~~-~~~~~~fD~Ii 138 (349)
T 3q7e_A 65 FKDKVVLDVGSGTGILCMFAAKA-GARKVIGIECSS-ISDYAVKIVKAN--K-LDHVVTIIKGKVEEV-ELPVEKVDIII 138 (349)
T ss_dssp HTTCEEEEESCTTSHHHHHHHHT-TCSEEEEEECST-HHHHHHHHHHHT--T-CTTTEEEEESCTTTC-CCSSSCEEEEE
T ss_pred CCCCEEEEEeccchHHHHHHHHC-CCCEEEEECcHH-HHHHHHHHHHHc--C-CCCcEEEEECcHHHc-cCCCCceEEEE
Confidence 35679999999999999999887 446999999995 999999876542 1 124699999998774 33357999999
Q ss_pred ECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 136 TDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 136 ~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
+++..+....... .+.+++.+.++|||||+++...
T Consensus 139 s~~~~~~l~~~~~-~~~~l~~~~r~LkpgG~li~~~ 173 (349)
T 3q7e_A 139 SEWMGYCLFYESM-LNTVLHARDKWLAPDGLIFPDR 173 (349)
T ss_dssp ECCCBBTBTBTCC-HHHHHHHHHHHEEEEEEEESCE
T ss_pred EccccccccCchh-HHHHHHHHHHhCCCCCEEcccc
Confidence 9876433322111 2678999999999999997543
No 167
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.54 E-value=1.5e-14 Score=117.08 Aligned_cols=122 Identities=17% Similarity=0.150 Sum_probs=87.9
Q ss_pred CCCCeEEEEeCCchHhHHHHhcC-CCCccEEEEEcCHHHHHHHHhhcCCCC-----CCC--CCCCeEEEEcchHHHHh-h
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKH-PSVESAYLVEIDNRVIEVSKKYLPGMA-----VGL--SDPRLTVHVGDGFRFMS-E 126 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~-~~~~~v~~ve~~~~~~~~a~~~~~~~~-----~~~--~~~~~~~~~~d~~~~~~-~ 126 (197)
.++.+|||+|||+|.++..+++. .+..+++++|+++.+++.|++++...+ +.. ...++++..+|+.+... .
T Consensus 104 ~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~~ 183 (336)
T 2b25_A 104 NPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATEDI 183 (336)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC---
T ss_pred CCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHccccc
Confidence 56679999999999999998876 455799999999999999999865210 010 12579999999876431 2
Q ss_pred cCCceeEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEcCCCCcChhHHHHHHHHHHh
Q psy4592 127 HQQEFDVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQAGTLWYSLDCVGNTLQHCAS 190 (197)
Q Consensus 127 ~~~~~D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~ 190 (197)
..++||+|+++++.++ .+++++.++|+|||.+++...+ .+.....++.+++
T Consensus 184 ~~~~fD~V~~~~~~~~---------~~l~~~~~~LkpgG~lv~~~~~----~~~~~~~~~~l~~ 234 (336)
T 2b25_A 184 KSLTFDAVALDMLNPH---------VTLPVFYPHLKHGGVCAVYVVN----ITQVIELLDGIRT 234 (336)
T ss_dssp ----EEEEEECSSSTT---------TTHHHHGGGEEEEEEEEEEESS----HHHHHHHHHHHHH
T ss_pred CCCCeeEEEECCCCHH---------HHHHHHHHhcCCCcEEEEEeCC----HHHHHHHHHHHHh
Confidence 2457999999875322 2679999999999999986543 4555566665553
No 168
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.53 E-value=6.5e-15 Score=116.47 Aligned_cols=111 Identities=23% Similarity=0.248 Sum_probs=85.4
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhh-cCCceeEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSE-HQQEFDVI 134 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~~~D~I 134 (197)
+++.+|||+|||+|.++..+++.. ..+++++|+++.+++.|++++... + ...+++++++|+.+. +. ..++||+|
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~--~-~~~~v~~~~~d~~~~-~~~~~~~fD~v 137 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERAG-IGEYYGVDIAEVSINDARVRARNM--K-RRFKVFFRAQDSYGR-HMDLGKEFDVI 137 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHHT-CSEEEEEESCHHHHHHHHHHHHTS--C-CSSEEEEEESCTTTS-CCCCSSCEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHhc--C-CCccEEEEECCcccc-ccCCCCCcCEE
Confidence 466799999999999988877653 359999999999999999987542 1 124789999998763 22 35789999
Q ss_pred EECCCCCC--CCCcccccHHHHHHHHhhcCCCcEEEEEcCC
Q psy4592 135 ITDSSDPV--GPAESLFQASYFELMSRALRPGGIVCSQAGT 173 (197)
Q Consensus 135 ~~~~~~~~--~~~~~l~~~~~~~~~~~~LkpgG~l~~~~~~ 173 (197)
++....++ ..... ...+++++.++|||||.+++...+
T Consensus 138 ~~~~~l~~~~~~~~~--~~~~l~~~~~~LkpgG~l~~~~~~ 176 (298)
T 1ri5_A 138 SSQFSFHYAFSTSES--LDIAQRNIARHLRPGGYFIMTVPS 176 (298)
T ss_dssp EEESCGGGGGSSHHH--HHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred EECchhhhhcCCHHH--HHHHHHHHHHhcCCCCEEEEEECC
Confidence 99876554 21111 267999999999999999987633
No 169
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.53 E-value=8.2e-15 Score=113.73 Aligned_cols=114 Identities=18% Similarity=0.179 Sum_probs=82.1
Q ss_pred CCCeEEEEeCCchHhHHHHhcC--CCCccEEEEEcCHHHHHHHHhhcCCCC-CCCCCCC---------------------
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKH--PSVESAYLVEIDNRVIEVSKKYLPGMA-VGLSDPR--------------------- 112 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~--~~~~~v~~ve~~~~~~~~a~~~~~~~~-~~~~~~~--------------------- 112 (197)
.+.+|||+|||+|.++..+++. .+..+++++|+|+.+++.|+++..... .++. .+
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 129 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLT-ARELERREQSERFGKPSYLEAAQ 129 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHH-HHHHHHHHHHHHHCCHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhcccc-ccchhhhhhhhhcccccchhhhh
Confidence 4579999999999999988875 445799999999999999998764310 0000 01
Q ss_pred ----eE-------------EEEcchHHHHhh----cCCceeEEEECCCCCCCCCcc-----cccHHHHHHHHhhcCCCcE
Q psy4592 113 ----LT-------------VHVGDGFRFMSE----HQQEFDVIITDSSDPVGPAES-----LFQASYFELMSRALRPGGI 166 (197)
Q Consensus 113 ----~~-------------~~~~d~~~~~~~----~~~~~D~I~~~~~~~~~~~~~-----l~~~~~~~~~~~~LkpgG~ 166 (197)
++ +.++|+.+.... ...+||+|+++++........ -....+++++.++|+|||+
T Consensus 130 ~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~ 209 (250)
T 1o9g_A 130 AARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAV 209 (250)
T ss_dssp HHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCE
T ss_pred hhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcE
Confidence 55 999998764421 234899999998754322210 1125799999999999999
Q ss_pred EEEEc
Q psy4592 167 VCSQA 171 (197)
Q Consensus 167 l~~~~ 171 (197)
+++..
T Consensus 210 l~~~~ 214 (250)
T 1o9g_A 210 IAVTD 214 (250)
T ss_dssp EEEEE
T ss_pred EEEeC
Confidence 99843
No 170
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.53 E-value=2.6e-14 Score=114.82 Aligned_cols=103 Identities=23% Similarity=0.297 Sum_probs=81.9
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCC-CccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPS-VESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVI 134 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~-~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I 134 (197)
.++.+|||||||+|.++..+++..+ ..+++++|+++++++.|++++... ..+++++..+|+.+.++. .++||+|
T Consensus 74 ~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~----g~~~v~~~~~d~~~~~~~-~~~fD~I 148 (317)
T 1dl5_A 74 DKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERL----GIENVIFVCGDGYYGVPE-FSPYDVI 148 (317)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHT----TCCSEEEEESCGGGCCGG-GCCEEEE
T ss_pred CCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHc----CCCCeEEEECChhhcccc-CCCeEEE
Confidence 4567999999999999999887654 357999999999999999987542 224699999998774432 4689999
Q ss_pred EECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEcCC
Q psy4592 135 ITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQAGT 173 (197)
Q Consensus 135 ~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~~~ 173 (197)
+++.+.+..+ +.+.+.|||||++++....
T Consensus 149 v~~~~~~~~~----------~~~~~~LkpgG~lvi~~~~ 177 (317)
T 1dl5_A 149 FVTVGVDEVP----------ETWFTQLKEGGRVIVPINL 177 (317)
T ss_dssp EECSBBSCCC----------HHHHHHEEEEEEEEEEBCB
T ss_pred EEcCCHHHHH----------HHHHHhcCCCcEEEEEECC
Confidence 9998765432 5678899999999997643
No 171
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.53 E-value=6.1e-14 Score=103.87 Aligned_cols=104 Identities=21% Similarity=0.280 Sum_probs=81.7
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
+++.+|||+|||+|.++..+++.. .+++++|+++.+++.++++++ +++++++|+.+. +...++||+|+
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~~D~~~~~~~~a~~~~~---------~~~~~~~d~~~~-~~~~~~~D~i~ 112 (195)
T 3cgg_A 45 PRGAKILDAGCGQGRIGGYLSKQG--HDVLGTDLDPILIDYAKQDFP---------EARWVVGDLSVD-QISETDFDLIV 112 (195)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHTT--CEEEEEESCHHHHHHHHHHCT---------TSEEEECCTTTS-CCCCCCEEEEE
T ss_pred cCCCeEEEECCCCCHHHHHHHHCC--CcEEEEcCCHHHHHHHHHhCC---------CCcEEEcccccC-CCCCCceeEEE
Confidence 466799999999999999988773 699999999999999998752 478999998663 33357899999
Q ss_pred ECC-CCCCCCCcccccHHHHHHHHhhcCCCcEEEEEcCC
Q psy4592 136 TDS-SDPVGPAESLFQASYFELMSRALRPGGIVCSQAGT 173 (197)
Q Consensus 136 ~~~-~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~~~ 173 (197)
+++ ..+...... ...+++.+.++|+|||.+++....
T Consensus 113 ~~~~~~~~~~~~~--~~~~l~~~~~~l~~~G~l~~~~~~ 149 (195)
T 3cgg_A 113 SAGNVMGFLAEDG--REPALANIHRALGADGRAVIGFGA 149 (195)
T ss_dssp ECCCCGGGSCHHH--HHHHHHHHHHHEEEEEEEEEEEET
T ss_pred ECCcHHhhcChHH--HHHHHHHHHHHhCCCCEEEEEeCC
Confidence 984 333332211 167999999999999999987643
No 172
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.53 E-value=3.6e-14 Score=109.05 Aligned_cols=115 Identities=19% Similarity=0.121 Sum_probs=79.9
Q ss_pred HHHHhhcccCCCCCCeEEEEeCCchHhHHHHhcC-CCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHH
Q psy4592 45 EMIAFLPLCSHPNPKKVLIVGGGDGGVAREVLKH-PSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRF 123 (197)
Q Consensus 45 ~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~ 123 (197)
.++..+..+...++.+|||+|||+|.++..++.. .+..+|+++|+++.+++.+.+.... ..++.++++|+...
T Consensus 64 ~ll~~l~~~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~------r~nv~~i~~Da~~~ 137 (232)
T 3id6_C 64 AILKGLKTNPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQR------RPNIFPLLADARFP 137 (232)
T ss_dssp HHHTTCSCCSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHH------CTTEEEEECCTTCG
T ss_pred HHHhhhhhcCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhh------cCCeEEEEcccccc
Confidence 3444444333456789999999999999988864 3457999999999886543332221 24799999998753
Q ss_pred Hhh--cCCceeEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 124 MSE--HQQEFDVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 124 ~~~--~~~~~D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
... ..++||+|++|.+. +.. ...+.+.+.+.|||||.|++..
T Consensus 138 ~~~~~~~~~~D~I~~d~a~---~~~---~~il~~~~~~~LkpGG~lvisi 181 (232)
T 3id6_C 138 QSYKSVVENVDVLYVDIAQ---PDQ---TDIAIYNAKFFLKVNGDMLLVI 181 (232)
T ss_dssp GGTTTTCCCEEEEEECCCC---TTH---HHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhhhccccceEEEEecCCC---hhH---HHHHHHHHHHhCCCCeEEEEEE
Confidence 221 24689999999864 111 1334556677999999999874
No 173
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.53 E-value=2.9e-14 Score=117.18 Aligned_cols=108 Identities=24% Similarity=0.240 Sum_probs=83.8
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
.++++|||+|||+|.++..+++.+ ..+++++|++ .+++.|++++... ++ .++++++++|+.+.. . .++||+|+
T Consensus 62 ~~~~~VLDlGcGtG~ls~~la~~g-~~~V~gvD~s-~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~~~-~-~~~~D~Iv 134 (376)
T 3r0q_C 62 FEGKTVLDVGTGSGILAIWSAQAG-ARKVYAVEAT-KMADHARALVKAN--NL-DHIVEVIEGSVEDIS-L-PEKVDVII 134 (376)
T ss_dssp TTTCEEEEESCTTTHHHHHHHHTT-CSEEEEEESS-TTHHHHHHHHHHT--TC-TTTEEEEESCGGGCC-C-SSCEEEEE
T ss_pred CCCCEEEEeccCcCHHHHHHHhcC-CCEEEEEccH-HHHHHHHHHHHHc--CC-CCeEEEEECchhhcC-c-CCcceEEE
Confidence 456799999999999999998874 3599999999 9999999887542 12 246999999987642 2 27899999
Q ss_pred ECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 136 TDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 136 ~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
+++..+....... ...+++.+.+.|||||.+++..
T Consensus 135 ~~~~~~~l~~e~~-~~~~l~~~~~~LkpgG~li~~~ 169 (376)
T 3r0q_C 135 SEWMGYFLLRESM-FDSVISARDRWLKPTGVMYPSH 169 (376)
T ss_dssp ECCCBTTBTTTCT-HHHHHHHHHHHEEEEEEEESSE
T ss_pred EcChhhcccchHH-HHHHHHHHHhhCCCCeEEEEec
Confidence 9875544332211 2678999999999999998754
No 174
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.52 E-value=2.7e-14 Score=112.32 Aligned_cols=120 Identities=18% Similarity=0.195 Sum_probs=91.0
Q ss_pred CCCCeEEEEeCCchHhHHHHhcC-CCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKH-PSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVI 134 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~-~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I 134 (197)
.++.+|||+|||+|.++..+++. .+..+++++|+++.+++.|++++.... +...++++++.+|+.+. ....++||+|
T Consensus 98 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~-g~~~~~v~~~~~d~~~~-~~~~~~~D~v 175 (280)
T 1i9g_A 98 FPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCY-GQPPDNWRLVVSDLADS-ELPDGSVDRA 175 (280)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHH-TSCCTTEEEECSCGGGC-CCCTTCEEEE
T ss_pred CCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhc-CCCCCcEEEEECchHhc-CCCCCceeEE
Confidence 45679999999999999998874 445799999999999999999864310 00125799999998764 2234689999
Q ss_pred EECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEcCCCCcChhHHHHHHHHHHh
Q psy4592 135 ITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQAGTLWYSLDCVGNTLQHCAS 190 (197)
Q Consensus 135 ~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~ 190 (197)
+++.+ ++ .++++++.++|+|||.+++...+ .+.+.++...+++
T Consensus 176 ~~~~~-----~~----~~~l~~~~~~L~pgG~l~~~~~~----~~~~~~~~~~l~~ 218 (280)
T 1i9g_A 176 VLDML-----AP----WEVLDAVSRLLVAGGVLMVYVAT----VTQLSRIVEALRA 218 (280)
T ss_dssp EEESS-----CG----GGGHHHHHHHEEEEEEEEEEESS----HHHHHHHHHHHHH
T ss_pred EECCc-----CH----HHHHHHHHHhCCCCCEEEEEeCC----HHHHHHHHHHHHh
Confidence 99764 22 35789999999999999997644 3556666666665
No 175
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.52 E-value=3.1e-14 Score=120.22 Aligned_cols=116 Identities=19% Similarity=0.232 Sum_probs=89.4
Q ss_pred CCCeEEEEeCCchHhHHHHhcCC-CCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKHP-SVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~~-~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
++.+|||+|||+|+.+..++... +...|+++|+++.+++.+++++... ...+++++++|+.++.....++||+|+
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~----g~~nv~~~~~D~~~~~~~~~~~fD~Il 192 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRC----GISNVALTHFDGRVFGAAVPEMFDAIL 192 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHH----TCCSEEEECCCSTTHHHHSTTCEEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc----CCCcEEEEeCCHHHhhhhccccCCEEE
Confidence 56799999999999999988753 3469999999999999999987643 224799999999876543457899999
Q ss_pred ECCCCCCC----CCccc---c-----------cHHHHHHHHhhcCCCcEEEEEcCCCCc
Q psy4592 136 TDSSDPVG----PAESL---F-----------QASYFELMSRALRPGGIVCSQAGTLWY 176 (197)
Q Consensus 136 ~~~~~~~~----~~~~l---~-----------~~~~~~~~~~~LkpgG~l~~~~~~~~~ 176 (197)
+|+|.... ..+.. + ..++++++.++|||||++++.+++...
T Consensus 193 ~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~~~ 251 (479)
T 2frx_A 193 LDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTLNQ 251 (479)
T ss_dssp EECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCSS
T ss_pred ECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccCCc
Confidence 99886321 11110 1 246889999999999999998876443
No 176
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.52 E-value=7.3e-15 Score=112.35 Aligned_cols=93 Identities=14% Similarity=0.159 Sum_probs=77.1
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhc-CCceeEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEH-QQEFDVI 134 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~~~D~I 134 (197)
+++.+|||+|||+|.++..+++.. .+++++|+++.+++.++++. ++++++++|+.+.++.. .++||+|
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~---------~~~~~~~~d~~~~~~~~~~~~fD~v 115 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQA--ARWAAYDFSPELLKLARANA---------PHADVYEWNGKGELPAGLGAPFGLI 115 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGGS--SEEEEEESCHHHHHHHHHHC---------TTSEEEECCSCSSCCTTCCCCEEEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHcC--CEEEEEECCHHHHHHHHHhC---------CCceEEEcchhhccCCcCCCCEEEE
Confidence 456799999999999999998873 69999999999999999873 36899999985545544 6799999
Q ss_pred EECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEE
Q psy4592 135 ITDSSDPVGPAESLFQASYFELMSRALRPGGIVCS 169 (197)
Q Consensus 135 ~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~ 169 (197)
+++. +. ..+++++.++|||||.++.
T Consensus 116 ~~~~------~~----~~~l~~~~~~LkpgG~l~~ 140 (226)
T 3m33_A 116 VSRR------GP----TSVILRLPELAAPDAHFLY 140 (226)
T ss_dssp EEES------CC----SGGGGGHHHHEEEEEEEEE
T ss_pred EeCC------CH----HHHHHHHHHHcCCCcEEEE
Confidence 9872 11 4577899999999999983
No 177
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.52 E-value=7.2e-14 Score=106.83 Aligned_cols=99 Identities=21% Similarity=0.294 Sum_probs=80.6
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
.++.+|||+|||+|.++..+++.. .+++++|+++.+++.+++++... . +++++.+|+.+.++ ..++||+|+
T Consensus 69 ~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~-----~-~v~~~~~d~~~~~~-~~~~fD~v~ 139 (231)
T 1vbf_A 69 HKGQKVLEIGTGIGYYTALIAEIV--DKVVSVEINEKMYNYASKLLSYY-----N-NIKLILGDGTLGYE-EEKPYDRVV 139 (231)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHS--SEEEEEESCHHHHHHHHHHHTTC-----S-SEEEEESCGGGCCG-GGCCEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHc--CEEEEEeCCHHHHHHHHHHHhhc-----C-CeEEEECCcccccc-cCCCccEEE
Confidence 456799999999999999988765 69999999999999999987642 2 79999999876332 246899999
Q ss_pred ECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEcCC
Q psy4592 136 TDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQAGT 173 (197)
Q Consensus 136 ~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~~~ 173 (197)
++...+..+ +++.++|+|||.+++....
T Consensus 140 ~~~~~~~~~----------~~~~~~L~pgG~l~~~~~~ 167 (231)
T 1vbf_A 140 VWATAPTLL----------CKPYEQLKEGGIMILPIGV 167 (231)
T ss_dssp ESSBBSSCC----------HHHHHTEEEEEEEEEEECS
T ss_pred ECCcHHHHH----------HHHHHHcCCCcEEEEEEcC
Confidence 988654332 4688999999999987644
No 178
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.52 E-value=3e-14 Score=106.18 Aligned_cols=121 Identities=14% Similarity=0.096 Sum_probs=81.3
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCC---------ccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEE-EcchHHHHh
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSV---------ESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVH-VGDGFRFMS 125 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~---------~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~-~~d~~~~~~ 125 (197)
+++.+|||+|||+|.++..+++..+. .+++++|+++.. ..++++++ .+|+.+...
T Consensus 21 ~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~---------------~~~~~~~~~~~d~~~~~~ 85 (196)
T 2nyu_A 21 RPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF---------------PLEGATFLCPADVTDPRT 85 (196)
T ss_dssp CTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC---------------CCTTCEEECSCCTTSHHH
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc---------------cCCCCeEEEeccCCCHHH
Confidence 45679999999999999999876543 689999999831 11357788 888654321
Q ss_pred -------hcCCceeEEEECCCCCCCCCccccc-------HHHHHHHHhhcCCCcEEEEEcCCCCcChhHHHHHHHHHHhh
Q psy4592 126 -------EHQQEFDVIITDSSDPVGPAESLFQ-------ASYFELMSRALRPGGIVCSQAGTLWYSLDCVGNTLQHCASV 191 (197)
Q Consensus 126 -------~~~~~~D~I~~~~~~~~~~~~~l~~-------~~~~~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~ 191 (197)
...++||+|+++...+......... ..+++++.++|||||.+++..... +....+...++..
T Consensus 86 ~~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~----~~~~~~~~~l~~~ 161 (196)
T 2nyu_A 86 SQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAG----SQSRRLQRRLTEE 161 (196)
T ss_dssp HHHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCS----GGGHHHHHHHHHH
T ss_pred HHHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCC----ccHHHHHHHHHHH
Confidence 1235899999987544322211111 368899999999999999975432 2334445555555
Q ss_pred CCcc
Q psy4592 192 FPRL 195 (197)
Q Consensus 192 f~~v 195 (197)
|..+
T Consensus 162 f~~v 165 (196)
T 2nyu_A 162 FQNV 165 (196)
T ss_dssp EEEE
T ss_pred hcce
Confidence 5443
No 179
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.52 E-value=4.2e-14 Score=114.70 Aligned_cols=107 Identities=21% Similarity=0.141 Sum_probs=81.0
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
.++.+|||||||+|.++..+++.+ ..+++++|+++ +++.|++++... ++ .++++++.+|+.+. +...++||+|+
T Consensus 63 ~~~~~VLDiGcGtG~ls~~la~~g-~~~v~gvD~s~-~~~~a~~~~~~~--~~-~~~i~~~~~d~~~~-~~~~~~~D~Iv 136 (340)
T 2fyt_A 63 FKDKVVLDVGCGTGILSMFAAKAG-AKKVLGVDQSE-ILYQAMDIIRLN--KL-EDTITLIKGKIEEV-HLPVEKVDVII 136 (340)
T ss_dssp TTTCEEEEETCTTSHHHHHHHHTT-CSEEEEEESST-HHHHHHHHHHHT--TC-TTTEEEEESCTTTS-CCSCSCEEEEE
T ss_pred cCCCEEEEeeccCcHHHHHHHHcC-CCEEEEEChHH-HHHHHHHHHHHc--CC-CCcEEEEEeeHHHh-cCCCCcEEEEE
Confidence 456799999999999999988874 46999999997 999999876542 11 25899999998763 33347899999
Q ss_pred ECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEE
Q psy4592 136 TDSSDPVGPAESLFQASYFELMSRALRPGGIVCS 169 (197)
Q Consensus 136 ~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~ 169 (197)
+++..+...... ....++..+.++|||||.++.
T Consensus 137 s~~~~~~l~~~~-~~~~~l~~~~~~LkpgG~lip 169 (340)
T 2fyt_A 137 SEWMGYFLLFES-MLDSVLYAKNKYLAKGGSVYP 169 (340)
T ss_dssp ECCCBTTBTTTC-HHHHHHHHHHHHEEEEEEEES
T ss_pred EcCchhhccCHH-HHHHHHHHHHhhcCCCcEEEc
Confidence 987422221111 126789999999999999983
No 180
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.51 E-value=9.3e-15 Score=112.79 Aligned_cols=99 Identities=13% Similarity=0.145 Sum_probs=78.1
Q ss_pred CCCeEEEEeCCchHhHHHHhcC----CCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHH--Hhhc-CC
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKH----PSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRF--MSEH-QQ 129 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~----~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~-~~ 129 (197)
++.+|||||||+|..+..+++. .+..+|++||+++.+++.|+.. .++++++++|+.+. ++.. ..
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~~---------~~~v~~~~gD~~~~~~l~~~~~~ 151 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPASD---------MENITLHQGDCSDLTTFEHLREM 151 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGGG---------CTTEEEEECCSSCSGGGGGGSSS
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhcc---------CCceEEEECcchhHHHHHhhccC
Confidence 4579999999999999998875 4558999999999998887621 25799999998764 3332 23
Q ss_pred ceeEEEECCCCCCCCCcccccHHHHHHHHh-hcCCCcEEEEEc
Q psy4592 130 EFDVIITDSSDPVGPAESLFQASYFELMSR-ALRPGGIVCSQA 171 (197)
Q Consensus 130 ~~D~I~~~~~~~~~~~~~l~~~~~~~~~~~-~LkpgG~l~~~~ 171 (197)
+||+|+++.. |. . ...+++++.+ +|||||++++..
T Consensus 152 ~fD~I~~d~~-~~--~----~~~~l~~~~r~~LkpGG~lv~~d 187 (236)
T 2bm8_A 152 AHPLIFIDNA-HA--N----TFNIMKWAVDHLLEEGDYFIIED 187 (236)
T ss_dssp CSSEEEEESS-CS--S----HHHHHHHHHHHTCCTTCEEEECS
T ss_pred CCCEEEECCc-hH--h----HHHHHHHHHHhhCCCCCEEEEEe
Confidence 7999999875 21 1 2678999997 999999999853
No 181
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.51 E-value=4.5e-14 Score=106.83 Aligned_cols=103 Identities=25% Similarity=0.247 Sum_probs=81.0
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCC-CCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHP-SVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVI 134 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~-~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I 134 (197)
.++.+|||+|||+|.++..+++.. +..+++++|+++.+++.+++++... ..+++++..+|+...++ ..++||+|
T Consensus 76 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~----~~~~v~~~~~d~~~~~~-~~~~fD~v 150 (215)
T 2yxe_A 76 KPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKL----GYDNVIVIVGDGTLGYE-PLAPYDRI 150 (215)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHH----TCTTEEEEESCGGGCCG-GGCCEEEE
T ss_pred CCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHc----CCCCeEEEECCcccCCC-CCCCeeEE
Confidence 456799999999999999988764 3369999999999999999886532 22469999999854333 24689999
Q ss_pred EECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEcCC
Q psy4592 135 ITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQAGT 173 (197)
Q Consensus 135 ~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~~~ 173 (197)
+++...+..+ +++.++|||||.+++....
T Consensus 151 ~~~~~~~~~~----------~~~~~~L~pgG~lv~~~~~ 179 (215)
T 2yxe_A 151 YTTAAGPKIP----------EPLIRQLKDGGKLLMPVGR 179 (215)
T ss_dssp EESSBBSSCC----------HHHHHTEEEEEEEEEEESS
T ss_pred EECCchHHHH----------HHHHHHcCCCcEEEEEECC
Confidence 9988654432 5789999999999997654
No 182
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.51 E-value=4.7e-14 Score=117.37 Aligned_cols=108 Identities=15% Similarity=0.137 Sum_probs=80.0
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHH-------HhhcCCCCCCCCCCCeEEEEcchHH---HHh
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVS-------KKYLPGMAVGLSDPRLTVHVGDGFR---FMS 125 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a-------~~~~~~~~~~~~~~~~~~~~~d~~~---~~~ 125 (197)
..+.+|||||||+|.++..+++..+..++++||+++.+++.| ++++... ++...+++++++|... .+.
T Consensus 241 ~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~--Gl~~~nV~~i~gD~~~~~~~~~ 318 (433)
T 1u2z_A 241 KKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLY--GMRLNNVEFSLKKSFVDNNRVA 318 (433)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHT--TBCCCCEEEEESSCSTTCHHHH
T ss_pred CCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHc--CCCCCceEEEEcCccccccccc
Confidence 566799999999999999998865546899999999999988 7766432 1113589999876432 121
Q ss_pred hcCCceeEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEE
Q psy4592 126 EHQQEFDVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQ 170 (197)
Q Consensus 126 ~~~~~~D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~ 170 (197)
...++||+|+++.+.. .++. ...++++.+.|||||.+++.
T Consensus 319 ~~~~~FDvIvvn~~l~-~~d~----~~~L~el~r~LKpGG~lVi~ 358 (433)
T 1u2z_A 319 ELIPQCDVILVNNFLF-DEDL----NKKVEKILQTAKVGCKIISL 358 (433)
T ss_dssp HHGGGCSEEEECCTTC-CHHH----HHHHHHHHTTCCTTCEEEES
T ss_pred cccCCCCEEEEeCccc-cccH----HHHHHHHHHhCCCCeEEEEe
Confidence 1236899999976542 2221 56789999999999999985
No 183
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.51 E-value=4e-14 Score=109.21 Aligned_cols=119 Identities=18% Similarity=0.154 Sum_probs=89.9
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
.++.+|||+|||+|.++..+++. ..+++++|+++++++.|+++.... + -.+++++..+|+.+... ..++||+|+
T Consensus 90 ~~~~~vldiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~--~-~~~~~~~~~~d~~~~~~-~~~~~D~v~ 163 (248)
T 2yvl_A 90 NKEKRVLEFGTGSGALLAVLSEV--AGEVWTFEAVEEFYKTAQKNLKKF--N-LGKNVKFFNVDFKDAEV-PEGIFHAAF 163 (248)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHH--SSEEEEECSCHHHHHHHHHHHHHT--T-CCTTEEEECSCTTTSCC-CTTCBSEEE
T ss_pred CCCCEEEEeCCCccHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHc--C-CCCcEEEEEcChhhccc-CCCcccEEE
Confidence 45679999999999999998877 379999999999999999986532 1 12579999999876331 236799999
Q ss_pred ECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEcCCCCcChhHHHHHHHHHHhhCC
Q psy4592 136 TDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQAGTLWYSLDCVGNTLQHCASVFP 193 (197)
Q Consensus 136 ~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~f~ 193 (197)
++++ ++ ..+++++.++|+|||.+++.... .+....+...+++.|.
T Consensus 164 ~~~~-----~~----~~~l~~~~~~L~~gG~l~~~~~~----~~~~~~~~~~l~~~f~ 208 (248)
T 2yvl_A 164 VDVR-----EP----WHYLEKVHKSLMEGAPVGFLLPT----ANQVIKLLESIENYFG 208 (248)
T ss_dssp ECSS-----CG----GGGHHHHHHHBCTTCEEEEEESS----HHHHHHHHHHSTTTEE
T ss_pred ECCc-----CH----HHHHHHHHHHcCCCCEEEEEeCC----HHHHHHHHHHHHhhCC
Confidence 9764 22 35789999999999999997643 3455566665554343
No 184
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.51 E-value=1e-12 Score=98.77 Aligned_cols=100 Identities=17% Similarity=0.208 Sum_probs=79.3
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
.++.+|||+|||+|.++..+++.. ..+++++|+++.+++.+++++... ..+++++++|+.+. .++||+|+
T Consensus 48 ~~~~~vlD~g~G~G~~~~~l~~~~-~~~v~~vD~~~~~~~~a~~~~~~~-----~~~~~~~~~d~~~~----~~~~D~v~ 117 (207)
T 1wy7_A 48 IEGKVVADLGAGTGVLSYGALLLG-AKEVICVEVDKEAVDVLIENLGEF-----KGKFKVFIGDVSEF----NSRVDIVI 117 (207)
T ss_dssp STTCEEEEETCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHTGGG-----TTSEEEEESCGGGC----CCCCSEEE
T ss_pred CCcCEEEEeeCCCCHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHHHc-----CCCEEEEECchHHc----CCCCCEEE
Confidence 456799999999999999988774 358999999999999999988652 12799999998763 25899999
Q ss_pred ECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEE
Q psy4592 136 TDSSDPVGPAESLFQASYFELMSRALRPGGIVCS 169 (197)
Q Consensus 136 ~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~ 169 (197)
+|+|.+..... ....+++.+.+.+ |+.+++
T Consensus 118 ~~~p~~~~~~~--~~~~~l~~~~~~l--~~~~~~ 147 (207)
T 1wy7_A 118 MNPPFGSQRKH--ADRPFLLKAFEIS--DVVYSI 147 (207)
T ss_dssp ECCCCSSSSTT--TTHHHHHHHHHHC--SEEEEE
T ss_pred EcCCCccccCC--chHHHHHHHHHhc--CcEEEE
Confidence 99997665432 1267899999998 565544
No 185
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.51 E-value=8e-15 Score=114.08 Aligned_cols=115 Identities=10% Similarity=0.040 Sum_probs=82.4
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCC-------------------------C
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLS-------------------------D 110 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~-------------------------~ 110 (197)
.++.+|||+|||+|.++..+++... .+++++|+++.+++.+++++.......+ .
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 133 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACESF-TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLR 133 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGTE-EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHH
T ss_pred cCCCEEEEECCCccHHHHHHhhccc-CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhh
Confidence 4557999999999999888776643 5999999999999999988753100000 0
Q ss_pred CCe-EEEEcchHHHHhhcC---CceeEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 111 PRL-TVHVGDGFRFMSEHQ---QEFDVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 111 ~~~-~~~~~d~~~~~~~~~---~~~D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
.++ ++..+|+.+...... ++||+|++....+..+...-....+++++.++|||||++++..
T Consensus 134 ~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 198 (265)
T 2i62_A 134 RAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVD 198 (265)
T ss_dssp HHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred hhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEe
Confidence 027 899999876433223 7899999987654221110012678999999999999998864
No 186
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.50 E-value=7e-14 Score=106.81 Aligned_cols=107 Identities=19% Similarity=0.194 Sum_probs=84.4
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
+++.+|||||||+|.++..+++..+..+++++|+++.+++.|+++.... ++ ..++++..+|+.+.++. .++||+|+
T Consensus 14 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~--gl-~~~i~~~~~d~l~~l~~-~~~~D~Iv 89 (225)
T 3kr9_A 14 SQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAH--GL-KEKIQVRLANGLAAFEE-TDQVSVIT 89 (225)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHT--TC-TTTEEEEECSGGGGCCG-GGCCCEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc--CC-CceEEEEECchhhhccc-CcCCCEEE
Confidence 4567999999999999999999877679999999999999999998653 22 24799999998665443 13699988
Q ss_pred ECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEcC
Q psy4592 136 TDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQAG 172 (197)
Q Consensus 136 ~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~~ 172 (197)
+... ...+ -.++++.+.+.|+++|+++++..
T Consensus 90 iaG~-----Gg~~-i~~Il~~~~~~L~~~~~lVlq~~ 120 (225)
T 3kr9_A 90 IAGM-----GGRL-IARILEEGLGKLANVERLILQPN 120 (225)
T ss_dssp EEEE-----CHHH-HHHHHHHTGGGCTTCCEEEEEES
T ss_pred EcCC-----ChHH-HHHHHHHHHHHhCCCCEEEEECC
Confidence 6432 1111 26789999999999999999754
No 187
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.50 E-value=8.3e-14 Score=107.06 Aligned_cols=103 Identities=25% Similarity=0.357 Sum_probs=80.3
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
.++.+|||+|||+|.++..+++..+ .+++++|+++.+++.|++++... ..+++++..+|+...++. ..+||+|+
T Consensus 90 ~~~~~vLdiG~G~G~~~~~la~~~~-~~v~~vD~~~~~~~~a~~~~~~~----~~~~v~~~~~d~~~~~~~-~~~fD~Ii 163 (235)
T 1jg1_A 90 KPGMNILEVGTGSGWNAALISEIVK-TDVYTIERIPELVEFAKRNLERA----GVKNVHVILGDGSKGFPP-KAPYDVII 163 (235)
T ss_dssp CTTCCEEEECCTTSHHHHHHHHHHC-SCEEEEESCHHHHHHHHHHHHHT----TCCSEEEEESCGGGCCGG-GCCEEEEE
T ss_pred CCCCEEEEEeCCcCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHc----CCCCcEEEECCcccCCCC-CCCccEEE
Confidence 4567999999999999999988765 79999999999999999987542 224699999997332222 34699999
Q ss_pred ECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEcCCC
Q psy4592 136 TDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQAGTL 174 (197)
Q Consensus 136 ~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~~~~ 174 (197)
++...+..+ +++.+.|+|||.+++.....
T Consensus 164 ~~~~~~~~~----------~~~~~~L~pgG~lvi~~~~~ 192 (235)
T 1jg1_A 164 VTAGAPKIP----------EPLIEQLKIGGKLIIPVGSY 192 (235)
T ss_dssp ECSBBSSCC----------HHHHHTEEEEEEEEEEECSS
T ss_pred ECCcHHHHH----------HHHHHhcCCCcEEEEEEecC
Confidence 987643332 46889999999999987553
No 188
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.50 E-value=6.5e-14 Score=116.92 Aligned_cols=115 Identities=20% Similarity=0.287 Sum_probs=88.2
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHh-hcCCceeEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMS-EHQQEFDVI 134 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~D~I 134 (197)
.++.+|||+|||+|+.+..+++..+..+++++|+++.+++.+++++... +.+++++++|+.+... ...++||+|
T Consensus 245 ~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~-----g~~~~~~~~D~~~~~~~~~~~~fD~V 319 (429)
T 1sqg_A 245 QNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRL-----GMKATVKQGDGRYPSQWCGEQQFDRI 319 (429)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHT-----TCCCEEEECCTTCTHHHHTTCCEEEE
T ss_pred CCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHc-----CCCeEEEeCchhhchhhcccCCCCEE
Confidence 4567999999999999999988665579999999999999999987652 2257899999876543 234689999
Q ss_pred EECCCCCCCC----Cccc--------------ccHHHHHHHHhhcCCCcEEEEEcCCCC
Q psy4592 135 ITDSSDPVGP----AESL--------------FQASYFELMSRALRPGGIVCSQAGTLW 175 (197)
Q Consensus 135 ~~~~~~~~~~----~~~l--------------~~~~~~~~~~~~LkpgG~l~~~~~~~~ 175 (197)
++|+|..... .+.. ...++++++.+.|||||++++.+++..
T Consensus 320 l~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~~ 378 (429)
T 1sqg_A 320 LLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVL 378 (429)
T ss_dssp EEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCCC
T ss_pred EEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCC
Confidence 9999864321 1110 014789999999999999999876643
No 189
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.50 E-value=3.4e-14 Score=115.07 Aligned_cols=102 Identities=15% Similarity=0.128 Sum_probs=83.5
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
..+.+|||+|||+|.++.. ++ +..+++++|+++.+++.|++++... ++ .++++++++|+.+++ ++||+|+
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~--~~~~V~~vD~s~~ai~~a~~n~~~n--~l-~~~v~~~~~D~~~~~----~~fD~Vi 263 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CK--NAKKIYAIDINPHAIELLKKNIKLN--KL-EHKIIPILSDVREVD----VKGNRVI 263 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TT--TSSEEEEEESCHHHHHHHHHHHHHT--TC-TTTEEEEESCGGGCC----CCEEEEE
T ss_pred CCCCEEEEccCccCHHHHh-cc--CCCEEEEEECCHHHHHHHHHHHHHc--CC-CCcEEEEECChHHhc----CCCcEEE
Confidence 4567999999999999999 76 3479999999999999999997652 12 247999999988754 7899999
Q ss_pred ECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEcCCCC
Q psy4592 136 TDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQAGTLW 175 (197)
Q Consensus 136 ~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~~~~~ 175 (197)
+|+|... .++++.+.++|+|||.+++.++++.
T Consensus 264 ~dpP~~~--------~~~l~~~~~~L~~gG~l~~~~~~~~ 295 (336)
T 2yx1_A 264 MNLPKFA--------HKFIDKALDIVEEGGVIHYYTIGKD 295 (336)
T ss_dssp ECCTTTG--------GGGHHHHHHHEEEEEEEEEEEEESS
T ss_pred ECCcHhH--------HHHHHHHHHHcCCCCEEEEEEeecC
Confidence 9986321 3588999999999999998776654
No 190
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.49 E-value=4.3e-14 Score=109.79 Aligned_cols=83 Identities=12% Similarity=0.063 Sum_probs=63.6
Q ss_pred CCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHH-Hhh-c---CCce
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRF-MSE-H---QQEF 131 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~-~---~~~~ 131 (197)
++.+|||+|||+|.++..+++..+..+++++|+++.+++.|++++... ++ ..+++++++|+.+. ... . .++|
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~~~~~~~~~~~~~~f 141 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQN--NL-SDLIKVVKVPQKTLLMDALKEESEIIY 141 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHT--TC-TTTEEEEECCTTCSSTTTSTTCCSCCB
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHc--CC-CccEEEEEcchhhhhhhhhhcccCCcc
Confidence 457999999999999988876544479999999999999999987542 11 23699999997652 211 1 2589
Q ss_pred eEEEECCCCCC
Q psy4592 132 DVIITDSSDPV 142 (197)
Q Consensus 132 D~I~~~~~~~~ 142 (197)
|+|++++|.+.
T Consensus 142 D~i~~npp~~~ 152 (254)
T 2h00_A 142 DFCMCNPPFFA 152 (254)
T ss_dssp SEEEECCCCC-
T ss_pred cEEEECCCCcc
Confidence 99999988654
No 191
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.49 E-value=6.7e-14 Score=109.64 Aligned_cols=110 Identities=17% Similarity=0.084 Sum_probs=83.6
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCC-CCccEEEEEcCHH------HHHHHHhhcCCCCCCCCCCCeEEEEcc-hHH-HHhh
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHP-SVESAYLVEIDNR------VIEVSKKYLPGMAVGLSDPRLTVHVGD-GFR-FMSE 126 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~-~~~~v~~ve~~~~------~~~~a~~~~~~~~~~~~~~~~~~~~~d-~~~-~~~~ 126 (197)
.++.+|||||||+|.++..+++.. +..+++++|+++. +++.|++++... + ..++++++.+| ... .++.
T Consensus 42 ~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~--~-~~~~v~~~~~d~~~~~~~~~ 118 (275)
T 3bkx_A 42 KPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAG--P-LGDRLTVHFNTNLSDDLGPI 118 (275)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTS--T-TGGGEEEECSCCTTTCCGGG
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhc--C-CCCceEEEECChhhhccCCC
Confidence 566799999999999999988763 5479999999997 999999887542 1 12579999998 321 1233
Q ss_pred cCCceeEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEcC
Q psy4592 127 HQQEFDVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQAG 172 (197)
Q Consensus 127 ~~~~~D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~~ 172 (197)
..++||+|++....++.++. ..+++.+.++++|||.+++...
T Consensus 119 ~~~~fD~v~~~~~l~~~~~~----~~~~~~~~~l~~~gG~l~~~~~ 160 (275)
T 3bkx_A 119 ADQHFDRVVLAHSLWYFASA----NALALLFKNMAAVCDHVDVAEW 160 (275)
T ss_dssp TTCCCSEEEEESCGGGSSCH----HHHHHHHHHHTTTCSEEEEEEE
T ss_pred CCCCEEEEEEccchhhCCCH----HHHHHHHHHHhCCCCEEEEEEe
Confidence 45789999998877666554 4577777788888999998653
No 192
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.49 E-value=4.8e-14 Score=115.29 Aligned_cols=109 Identities=17% Similarity=0.214 Sum_probs=86.3
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHH-hhcCCceeEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFM-SEHQQEFDVI 134 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~~D~I 134 (197)
..+.+|||||||+|.++..+++..+..+++++|+ |.+++.|++++... + ..++++++.+|+.+.. +. +++||+|
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~--~-~~~~v~~~~~d~~~~~~~~-p~~~D~v 252 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGL--S-GSERIHGHGANLLDRDVPF-PTGFDAV 252 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTC--T-TGGGEEEEECCCCSSSCCC-CCCCSEE
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhc--C-cccceEEEEccccccCCCC-CCCcCEE
Confidence 3567999999999999999998777789999999 99999999987642 1 1258999999976521 11 2689999
Q ss_pred EECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 135 ITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 135 ~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
++....|..++.. ...++++++++|||||.+++..
T Consensus 253 ~~~~vlh~~~~~~--~~~~l~~~~~~L~pgG~l~i~e 287 (363)
T 3dp7_A 253 WMSQFLDCFSEEE--VISILTRVAQSIGKDSKVYIME 287 (363)
T ss_dssp EEESCSTTSCHHH--HHHHHHHHHHHCCTTCEEEEEE
T ss_pred EEechhhhCCHHH--HHHHHHHHHHhcCCCcEEEEEe
Confidence 9988776654432 1578999999999999998854
No 193
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.49 E-value=2.1e-14 Score=114.92 Aligned_cols=115 Identities=15% Similarity=0.095 Sum_probs=84.8
Q ss_pred CCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCC---CCCCCCeEEEEcchHHHH---hh--cC
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAV---GLSDPRLTVHVGDGFRFM---SE--HQ 128 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~---~~~~~~~~~~~~d~~~~~---~~--~~ 128 (197)
++.+|||+|||+|.++..+++. +..+++++|+++.+++.|+++...... .....+++++++|+.+.. +. ..
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 112 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKG-RINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQ 112 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTT
T ss_pred CCCEEEEECCCCcHHHHHHHhc-CCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCC
Confidence 5679999999999999988875 347999999999999999987542100 001247899999987642 11 23
Q ss_pred CceeEEEECCCCCCC-CCcccccHHHHHHHHhhcCCCcEEEEEcCC
Q psy4592 129 QEFDVIITDSSDPVG-PAESLFQASYFELMSRALRPGGIVCSQAGT 173 (197)
Q Consensus 129 ~~~D~I~~~~~~~~~-~~~~l~~~~~~~~~~~~LkpgG~l~~~~~~ 173 (197)
++||+|++....|+. .+.. ....+++++.++|||||.+++....
T Consensus 113 ~~fD~V~~~~~l~~~~~~~~-~~~~~l~~~~~~LkpgG~li~~~~~ 157 (313)
T 3bgv_A 113 MCFDICSCQFVCHYSFESYE-QADMMLRNACERLSPGGYFIGTTPN 157 (313)
T ss_dssp CCEEEEEEETCGGGGGGSHH-HHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred CCEEEEEEecchhhccCCHH-HHHHHHHHHHHHhCCCcEEEEecCC
Confidence 589999998877665 2211 1158999999999999999987543
No 194
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.49 E-value=2e-14 Score=112.76 Aligned_cols=129 Identities=14% Similarity=0.034 Sum_probs=85.0
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEE--EcchHHHHhhcCCceeE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVH--VGDGFRFMSEHQQEFDV 133 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~--~~d~~~~~~~~~~~~D~ 133 (197)
+++.+|||+|||+|.++..+++. .+|++||+++ ++..+++. +..... ...++.++ ++|+.++ + .++||+
T Consensus 73 ~~g~~VLDlGcGtG~~s~~la~~---~~V~gvD~s~-m~~~a~~~-~~~~~~-~~~~v~~~~~~~D~~~l-~--~~~fD~ 143 (265)
T 2oxt_A 73 ELTGRVVDLGCGRGGWSYYAASR---PHVMDVRAYT-LGVGGHEV-PRITES-YGWNIVKFKSRVDIHTL-P--VERTDV 143 (265)
T ss_dssp CCCEEEEEESCTTSHHHHHHHTS---TTEEEEEEEC-CCCSSCCC-CCCCCB-TTGGGEEEECSCCTTTS-C--CCCCSE
T ss_pred CCCCEEEEeCcCCCHHHHHHHHc---CcEEEEECch-hhhhhhhh-hhhhhc-cCCCeEEEecccCHhHC-C--CCCCcE
Confidence 45679999999999999988876 5899999998 53222211 100000 11268888 8998763 2 578999
Q ss_pred EEECCCCCCCCCcccccH---HHHHHHHhhcCCCc--EEEEEcCCCCcChhHHHHHHHHHHhhCCccc
Q psy4592 134 IITDSSDPVGPAESLFQA---SYFELMSRALRPGG--IVCSQAGTLWYSLDCVGNTLQHCASVFPRLH 196 (197)
Q Consensus 134 I~~~~~~~~~~~~~l~~~---~~~~~~~~~LkpgG--~l~~~~~~~~~~~~~~~~~~~~~~~~f~~v~ 196 (197)
|+++.. +....+.+... ..++.+.++||||| .|++....+.. ..+...+..+++.|..++
T Consensus 144 V~sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~~~~--~~~~~~l~~l~~~f~~v~ 208 (265)
T 2oxt_A 144 IMCDVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLCPYS--VEVMERLSVMQRKWGGGL 208 (265)
T ss_dssp EEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESCTTS--HHHHHHHHHHHHHHCCEE
T ss_pred EEEeCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCCCCC--hhHHHHHHHHHHHcCCEE
Confidence 999987 44433211111 37889999999999 99987655322 333355566666665543
No 195
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.49 E-value=8.5e-14 Score=106.23 Aligned_cols=107 Identities=13% Similarity=0.075 Sum_probs=81.1
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCC-----CCccEEEEEcCHHHHHHHHhhcCCCCC-CCCCCCeEEEEcchHHHHh---h
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHP-----SVESAYLVEIDNRVIEVSKKYLPGMAV-GLSDPRLTVHVGDGFRFMS---E 126 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~-----~~~~v~~ve~~~~~~~~a~~~~~~~~~-~~~~~~~~~~~~d~~~~~~---~ 126 (197)
.++.+|||+|||+|.++..+++.. +..+++++|+++.+++.|++++...+. .+..++++++.+|+.+... .
T Consensus 79 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 158 (227)
T 2pbf_A 79 KPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKK 158 (227)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHH
T ss_pred CCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCc
Confidence 456799999999999999888754 346999999999999999988653200 0013579999999877431 2
Q ss_pred cCCceeEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEcC
Q psy4592 127 HQQEFDVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQAG 172 (197)
Q Consensus 127 ~~~~~D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~~ 172 (197)
..++||+|+++...+. +++.+.+.|||||++++...
T Consensus 159 ~~~~fD~I~~~~~~~~----------~~~~~~~~LkpgG~lv~~~~ 194 (227)
T 2pbf_A 159 ELGLFDAIHVGASASE----------LPEILVDLLAENGKLIIPIE 194 (227)
T ss_dssp HHCCEEEEEECSBBSS----------CCHHHHHHEEEEEEEEEEEE
T ss_pred cCCCcCEEEECCchHH----------HHHHHHHhcCCCcEEEEEEc
Confidence 2468999999886542 23778999999999998764
No 196
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.49 E-value=3.4e-15 Score=116.85 Aligned_cols=114 Identities=13% Similarity=0.053 Sum_probs=79.0
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCC-------------------------C
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLS-------------------------D 110 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~-------------------------~ 110 (197)
.++.+|||||||+|.++..++... ..+|+++|+|+.+++.|++++.......+ .
T Consensus 54 ~~g~~vLDiGCG~G~~~~~~~~~~-~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~ 132 (263)
T 2a14_A 54 LQGDTLIDIGSGPTIYQVLAACDS-FQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLR 132 (263)
T ss_dssp CCEEEEEESSCTTCCGGGTTGGGT-EEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHH
T ss_pred CCCceEEEeCCCccHHHHHHHHhh-hcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHH
Confidence 355799999999997766555443 35799999999999999987643100000 0
Q ss_pred CCeE-EEEcchHHHHhh---cCCceeEEEECCCCCCC-CCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 111 PRLT-VHVGDGFRFMSE---HQQEFDVIITDSSDPVG-PAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 111 ~~~~-~~~~d~~~~~~~---~~~~~D~I~~~~~~~~~-~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
.+++ ++.+|+.+..+. ..++||+|++....++. ++..- ....+++++++|||||.|++..
T Consensus 133 ~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~-~~~~l~~i~r~LKPGG~li~~~ 197 (263)
T 2a14_A 133 AAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDA-YRAALCNLASLLKPGGHLVTTV 197 (263)
T ss_dssp HHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHH-HHHHHHHHHTTEEEEEEEEEEE
T ss_pred hhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHH-HHHHHHHHHHHcCCCcEEEEEE
Confidence 1233 888887763221 24689999999876552 22110 1578999999999999999975
No 197
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.49 E-value=6.4e-14 Score=114.95 Aligned_cols=105 Identities=14% Similarity=0.215 Sum_probs=82.7
Q ss_pred CCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhh-cCCceeEEE
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSE-HQQEFDVII 135 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~~~D~I~ 135 (197)
.+.+|||+| |+|.++..+++..+..+++++|+++.+++.|++++... ++ .+++++++|+.+.++. ..++||+|+
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~--g~--~~v~~~~~D~~~~l~~~~~~~fD~Vi 246 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEI--GY--EDIEIFTFDLRKPLPDYALHKFDTFI 246 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHH--TC--CCEEEECCCTTSCCCTTTSSCBSEEE
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc--CC--CCEEEEEChhhhhchhhccCCccEEE
Confidence 467999999 99999999887655479999999999999999987642 11 2799999998774432 245899999
Q ss_pred ECCCCCCCCCcccccHHHHHHHHhhcCCCcEE-EEEc
Q psy4592 136 TDSSDPVGPAESLFQASYFELMSRALRPGGIV-CSQA 171 (197)
Q Consensus 136 ~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l-~~~~ 171 (197)
+|+|.+.. . ...+++++.++|||||.+ ++..
T Consensus 247 ~~~p~~~~---~--~~~~l~~~~~~LkpgG~~~~~~~ 278 (373)
T 2qm3_A 247 TDPPETLE---A--IRAFVGRGIATLKGPRCAGYFGI 278 (373)
T ss_dssp ECCCSSHH---H--HHHHHHHHHHTBCSTTCEEEEEE
T ss_pred ECCCCchH---H--HHHHHHHHHHHcccCCeEEEEEE
Confidence 99975433 1 278999999999999944 5443
No 198
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.49 E-value=2.4e-14 Score=112.87 Aligned_cols=128 Identities=14% Similarity=0.082 Sum_probs=84.4
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEE--EcchHHHHhhcCCceeE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVH--VGDGFRFMSEHQQEFDV 133 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~--~~d~~~~~~~~~~~~D~ 133 (197)
+++.+|||+|||+|.++..+++. .+|++||+++ ++..+++. +..... ...++.++ ++|+.++ + .++||+
T Consensus 81 ~~g~~VLDlGcGtG~~s~~la~~---~~V~gVD~s~-m~~~a~~~-~~~~~~-~~~~v~~~~~~~D~~~l-~--~~~fD~ 151 (276)
T 2wa2_A 81 ELKGTVVDLGCGRGSWSYYAASQ---PNVREVKAYT-LGTSGHEK-PRLVET-FGWNLITFKSKVDVTKM-E--PFQADT 151 (276)
T ss_dssp CCCEEEEEESCTTCHHHHHHHTS---TTEEEEEEEC-CCCTTSCC-CCCCCC-TTGGGEEEECSCCGGGC-C--CCCCSE
T ss_pred CCCCEEEEeccCCCHHHHHHHHc---CCEEEEECch-hhhhhhhc-hhhhhh-cCCCeEEEeccCcHhhC-C--CCCcCE
Confidence 45679999999999999998877 5899999999 54333221 100000 11278899 8998763 2 578999
Q ss_pred EEECCCCCCCCCccccc---HHHHHHHHhhcCCCc--EEEEEcCCCCcChhHHHHHHHHHHhhCCcc
Q psy4592 134 IITDSSDPVGPAESLFQ---ASYFELMSRALRPGG--IVCSQAGTLWYSLDCVGNTLQHCASVFPRL 195 (197)
Q Consensus 134 I~~~~~~~~~~~~~l~~---~~~~~~~~~~LkpgG--~l~~~~~~~~~~~~~~~~~~~~~~~~f~~v 195 (197)
|+++.. +....+.+.. ...++.+.++||||| .|++....+.. ..+...++.+++.|..+
T Consensus 152 Vvsd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~~~~--~~~~~~l~~l~~~f~~v 215 (276)
T 2wa2_A 152 VLCDIG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLNPYS--CDVLEALMKMQARFGGG 215 (276)
T ss_dssp EEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESCCCS--HHHHHHHHHHHHHHCCE
T ss_pred EEECCC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCCCCc--hhHHHHHHHHHHHcCCE
Confidence 999987 4443321111 136889999999999 99986655322 32334455565555544
No 199
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.49 E-value=1e-13 Score=106.15 Aligned_cols=107 Identities=19% Similarity=0.197 Sum_probs=84.4
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
+++.+|||||||+|.++..+++..+..+++++|+++.+++.|++++... ++ ..++++..+|+.+.+.. .++||+|+
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~--gl-~~~I~~~~gD~l~~~~~-~~~~D~Iv 95 (230)
T 3lec_A 20 PKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEH--GL-TSKIDVRLANGLSAFEE-ADNIDTIT 95 (230)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHT--TC-TTTEEEEECSGGGGCCG-GGCCCEEE
T ss_pred CCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc--CC-CCcEEEEECchhhcccc-ccccCEEE
Confidence 4567999999999999999998877679999999999999999998653 22 34799999998775532 23799988
Q ss_pred ECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEcC
Q psy4592 136 TDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQAG 172 (197)
Q Consensus 136 ~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~~ 172 (197)
+... ...+ -.++++...+.|+++|.|+++..
T Consensus 96 iaGm-----Gg~l-I~~IL~~~~~~l~~~~~lIlqp~ 126 (230)
T 3lec_A 96 ICGM-----GGRL-IADILNNDIDKLQHVKTLVLQPN 126 (230)
T ss_dssp EEEE-----CHHH-HHHHHHHTGGGGTTCCEEEEEES
T ss_pred EeCC-----chHH-HHHHHHHHHHHhCcCCEEEEECC
Confidence 6432 1111 26788999999999999999753
No 200
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.48 E-value=2.4e-14 Score=108.65 Aligned_cols=110 Identities=16% Similarity=0.084 Sum_probs=77.5
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
.++.+|||+|||+|.++..+++..+..+++++|+++++++.+.+...........++++++++|+.+ ++...++ |.|+
T Consensus 26 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~-l~~~~~~-d~v~ 103 (218)
T 3mq2_A 26 QYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAER-LPPLSGV-GELH 103 (218)
T ss_dssp TSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTT-CCSCCCE-EEEE
T ss_pred cCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhh-CCCCCCC-CEEE
Confidence 4567999999999999999998776789999999999888532221110000123589999999877 3443445 7777
Q ss_pred ECCCCC-----CCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 136 TDSSDP-----VGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 136 ~~~~~~-----~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
+..+.. +.++. ..++++++++|||||.+++..
T Consensus 104 ~~~~~~~~~~~~~~~~----~~~l~~~~~~LkpgG~l~~~~ 140 (218)
T 3mq2_A 104 VLMPWGSLLRGVLGSS----PEMLRGMAAVCRPGASFLVAL 140 (218)
T ss_dssp EESCCHHHHHHHHTSS----SHHHHHHHHTEEEEEEEEEEE
T ss_pred EEccchhhhhhhhccH----HHHHHHHHHHcCCCcEEEEEe
Confidence 544311 11111 578999999999999999864
No 201
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.48 E-value=4.5e-14 Score=115.63 Aligned_cols=107 Identities=21% Similarity=0.266 Sum_probs=82.1
Q ss_pred CCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEEE
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVIIT 136 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~~ 136 (197)
+++.|||||||+|.++..+++.+. .+|++||.++ +++.|++..... ++ ..+++++.+|+++. .. ++++|+||+
T Consensus 83 ~~k~VLDvG~GtGiLs~~Aa~aGA-~~V~ave~s~-~~~~a~~~~~~n--~~-~~~i~~i~~~~~~~-~l-pe~~Dvivs 155 (376)
T 4hc4_A 83 RGKTVLDVGAGTGILSIFCAQAGA-RRVYAVEASA-IWQQAREVVRFN--GL-EDRVHVLPGPVETV-EL-PEQVDAIVS 155 (376)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTC-SEEEEEECST-THHHHHHHHHHT--TC-TTTEEEEESCTTTC-CC-SSCEEEEEC
T ss_pred CCCEEEEeCCCccHHHHHHHHhCC-CEEEEEeChH-HHHHHHHHHHHc--CC-CceEEEEeeeeeee-cC-CccccEEEe
Confidence 567999999999999988887753 6999999996 888898876542 22 35899999998764 22 478999999
Q ss_pred CCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 137 DSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 137 ~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
.+........... +.++....+.|||||.++...
T Consensus 156 E~~~~~l~~e~~l-~~~l~a~~r~Lkp~G~~iP~~ 189 (376)
T 4hc4_A 156 EWMGYGLLHESML-SSVLHARTKWLKEGGLLLPAS 189 (376)
T ss_dssp CCCBTTBTTTCSH-HHHHHHHHHHEEEEEEEESCE
T ss_pred ecccccccccchh-hhHHHHHHhhCCCCceECCcc
Confidence 8765444333322 678888889999999988544
No 202
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.48 E-value=1.7e-13 Score=104.45 Aligned_cols=120 Identities=20% Similarity=0.227 Sum_probs=85.6
Q ss_pred hHHHHHHhhcccCCCCCCeEEEEeCCchHhHHHHhcCC-CCccEEEEEcCHHHHHHHHhhcCCCCCC-CCCCCeEEEEcc
Q psy4592 42 SYSEMIAFLPLCSHPNPKKVLIVGGGDGGVAREVLKHP-SVESAYLVEIDNRVIEVSKKYLPGMAVG-LSDPRLTVHVGD 119 (197)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~~~v~~ve~~~~~~~~a~~~~~~~~~~-~~~~~~~~~~~d 119 (197)
.+..++..+.. ...++.+|||+|||+|..+..+++.. +..+++++|+++.+++.+++++...+.. +..++++++.+|
T Consensus 63 ~~~~~l~~l~~-~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d 141 (226)
T 1i1n_A 63 MHAYALELLFD-QLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGD 141 (226)
T ss_dssp HHHHHHHHTTT-TSCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESC
T ss_pred HHHHHHHHHHh-hCCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECC
Confidence 33444544431 12456799999999999999888753 4369999999999999999876531000 012479999999
Q ss_pred hHHHHhhcCCceeEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEcCC
Q psy4592 120 GFRFMSEHQQEFDVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQAGT 173 (197)
Q Consensus 120 ~~~~~~~~~~~~D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~~~ 173 (197)
+.+... ..++||+|+++.+.+. +++++.++|||||++++....
T Consensus 142 ~~~~~~-~~~~fD~i~~~~~~~~----------~~~~~~~~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 142 GRMGYA-EEAPYDAIHVGAAAPV----------VPQALIDQLKPGGRLILPVGP 184 (226)
T ss_dssp GGGCCG-GGCCEEEEEECSBBSS----------CCHHHHHTEEEEEEEEEEESC
T ss_pred cccCcc-cCCCcCEEEECCchHH----------HHHHHHHhcCCCcEEEEEEec
Confidence 875322 2468999999876422 236789999999999998754
No 203
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.48 E-value=4.9e-14 Score=107.73 Aligned_cols=121 Identities=17% Similarity=0.173 Sum_probs=86.2
Q ss_pred hhHHHHHHhhcccCCCCCCeEEEEeCCchHhHHHHhcCCC------CccEEEEEcCHHHHHHHHhhcCCCCC-CCCCCCe
Q psy4592 41 FSYSEMIAFLPLCSHPNPKKVLIVGGGDGGVAREVLKHPS------VESAYLVEIDNRVIEVSKKYLPGMAV-GLSDPRL 113 (197)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~------~~~v~~ve~~~~~~~~a~~~~~~~~~-~~~~~~~ 113 (197)
.....++..+.. ...++.+|||+|||+|.++..+++..+ ..+++++|+++++++.+++++...+. .+..+++
T Consensus 69 ~~~~~~~~~l~~-~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v 147 (227)
T 1r18_A 69 HMHAFALEYLRD-HLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQL 147 (227)
T ss_dssp HHHHHHHHHTTT-TCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSE
T ss_pred HHHHHHHHHHHh-hCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCce
Confidence 334445554421 124557999999999999998887533 25899999999999999988653100 0002479
Q ss_pred EEEEcchHHHHhhcCCceeEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEcCC
Q psy4592 114 TVHVGDGFRFMSEHQQEFDVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQAGT 173 (197)
Q Consensus 114 ~~~~~d~~~~~~~~~~~~D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~~~ 173 (197)
+++.+|+.+.++. .++||+|+++...+.. .+++.+.|||||++++....
T Consensus 148 ~~~~~d~~~~~~~-~~~fD~I~~~~~~~~~----------~~~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 148 LIVEGDGRKGYPP-NAPYNAIHVGAAAPDT----------PTELINQLASGGRLIVPVGP 196 (227)
T ss_dssp EEEESCGGGCCGG-GCSEEEEEECSCBSSC----------CHHHHHTEEEEEEEEEEESC
T ss_pred EEEECCcccCCCc-CCCccEEEECCchHHH----------HHHHHHHhcCCCEEEEEEec
Confidence 9999998763322 3689999998865432 26789999999999998754
No 204
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.47 E-value=9.2e-14 Score=108.32 Aligned_cols=100 Identities=19% Similarity=0.264 Sum_probs=79.5
Q ss_pred CCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEEE
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVIIT 136 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~~ 136 (197)
++.+|||+|||+|.++..+++.. .+++++|+++.+++.++++.. .+ ++++|+.+ ++...++||+|++
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~l~~a~~~~~--------~~--~~~~d~~~-~~~~~~~fD~v~~ 120 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQERG--FEVVLVDPSKEMLEVAREKGV--------KN--VVEAKAED-LPFPSGAFEAVLA 120 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTTT--CEEEEEESCHHHHHHHHHHTC--------SC--EEECCTTS-CCSCTTCEEEEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHHcC--CeEEEEeCCHHHHHHHHhhcC--------CC--EEECcHHH-CCCCCCCEEEEEE
Confidence 56799999999999999988773 689999999999999998753 12 78888765 3334578999998
Q ss_pred CCCC-CCCCCcccccHHHHHHHHhhcCCCcEEEEEcCC
Q psy4592 137 DSSD-PVGPAESLFQASYFELMSRALRPGGIVCSQAGT 173 (197)
Q Consensus 137 ~~~~-~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~~~ 173 (197)
.... +..++. ..+++++.++|||||.+++...+
T Consensus 121 ~~~~~~~~~~~----~~~l~~~~~~LkpgG~l~~~~~~ 154 (260)
T 2avn_A 121 LGDVLSYVENK----DKAFSEIRRVLVPDGLLIATVDN 154 (260)
T ss_dssp CSSHHHHCSCH----HHHHHHHHHHEEEEEEEEEEEEB
T ss_pred cchhhhccccH----HHHHHHHHHHcCCCeEEEEEeCC
Confidence 7542 333332 78999999999999999987644
No 205
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.47 E-value=7.9e-14 Score=105.94 Aligned_cols=100 Identities=18% Similarity=0.177 Sum_probs=80.9
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHH-HhhcCCceeEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRF-MSEHQQEFDVI 134 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~D~I 134 (197)
.++.+|||+|||+|.++..+++. + .+++++|+++.+++.++++. .++..+|+.+. .+...++||+|
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~-~-~~~~~~D~~~~~~~~~~~~~-----------~~~~~~d~~~~~~~~~~~~fD~v 97 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKEN-G-TRVSGIEAFPEAAEQAKEKL-----------DHVVLGDIETMDMPYEEEQFDCV 97 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTT-T-CEEEEEESSHHHHHHHHTTS-----------SEEEESCTTTCCCCSCTTCEEEE
T ss_pred cCCCcEEEeCCCCCHHHHHHHhc-C-CeEEEEeCCHHHHHHHHHhC-----------CcEEEcchhhcCCCCCCCccCEE
Confidence 45679999999999999999887 4 79999999999999998753 15777887642 22234789999
Q ss_pred EECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEcC
Q psy4592 135 ITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQAG 172 (197)
Q Consensus 135 ~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~~ 172 (197)
++....++.++. ..+++++.++|+|||.+++...
T Consensus 98 ~~~~~l~~~~~~----~~~l~~~~~~L~~gG~l~~~~~ 131 (230)
T 3cc8_A 98 IFGDVLEHLFDP----WAVIEKVKPYIKQNGVILASIP 131 (230)
T ss_dssp EEESCGGGSSCH----HHHHHHTGGGEEEEEEEEEEEE
T ss_pred EECChhhhcCCH----HHHHHHHHHHcCCCCEEEEEeC
Confidence 998776555544 6899999999999999999753
No 206
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.47 E-value=9.8e-14 Score=112.01 Aligned_cols=107 Identities=22% Similarity=0.235 Sum_probs=81.1
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
.++.+|||+|||+|.++..+++. +..+++++|++ .+++.|++++... ++ .++++++.+|+.+. +.+.++||+|+
T Consensus 37 ~~~~~VLDiGcGtG~ls~~la~~-g~~~v~~vD~s-~~~~~a~~~~~~~--~~-~~~i~~~~~d~~~~-~~~~~~~D~Iv 110 (328)
T 1g6q_1 37 FKDKIVLDVGCGTGILSMFAAKH-GAKHVIGVDMS-SIIEMAKELVELN--GF-SDKITLLRGKLEDV-HLPFPKVDIII 110 (328)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHT-CCSEEEEEESS-THHHHHHHHHHHT--TC-TTTEEEEESCTTTS-CCSSSCEEEEE
T ss_pred cCCCEEEEecCccHHHHHHHHHC-CCCEEEEEChH-HHHHHHHHHHHHc--CC-CCCEEEEECchhhc-cCCCCcccEEE
Confidence 35579999999999999988877 34699999999 5899998876542 11 24799999998763 33347899999
Q ss_pred ECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEE
Q psy4592 136 TDSSDPVGPAESLFQASYFELMSRALRPGGIVCS 169 (197)
Q Consensus 136 ~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~ 169 (197)
++++.+....... ...++..+.+.|||||.++.
T Consensus 111 s~~~~~~l~~~~~-~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 111 SEWMGYFLLYESM-MDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp ECCCBTTBSTTCC-HHHHHHHHHHHEEEEEEEES
T ss_pred EeCchhhcccHHH-HHHHHHHHHhhcCCCeEEEE
Confidence 9876443322211 26788999999999999974
No 207
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.47 E-value=1.5e-13 Score=106.07 Aligned_cols=107 Identities=15% Similarity=0.212 Sum_probs=83.9
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
+++.+|||||||+|.++..+++..+..+++++|+++.+++.|++++... ++ ..++++..+|+.+.+.. .++||+|+
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~--gl-~~~I~v~~gD~l~~~~~-~~~~D~Iv 95 (244)
T 3gnl_A 20 TKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSS--GL-TEQIDVRKGNGLAVIEK-KDAIDTIV 95 (244)
T ss_dssp CSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHT--TC-TTTEEEEECSGGGGCCG-GGCCCEEE
T ss_pred CCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc--CC-CceEEEEecchhhccCc-cccccEEE
Confidence 4567999999999999999998876679999999999999999997652 22 24799999998775532 23699988
Q ss_pred ECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEcC
Q psy4592 136 TDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQAG 172 (197)
Q Consensus 136 ~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~~ 172 (197)
+... ...+ -.++++...+.|+++|.|+++..
T Consensus 96 iagm-----Gg~l-I~~IL~~~~~~L~~~~~lIlq~~ 126 (244)
T 3gnl_A 96 IAGM-----GGTL-IRTILEEGAAKLAGVTKLILQPN 126 (244)
T ss_dssp EEEE-----CHHH-HHHHHHHTGGGGTTCCEEEEEES
T ss_pred EeCC-----chHH-HHHHHHHHHHHhCCCCEEEEEcC
Confidence 6431 1111 26788999999999999999753
No 208
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.47 E-value=3.8e-14 Score=108.60 Aligned_cols=102 Identities=22% Similarity=0.293 Sum_probs=79.6
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
+++.+|||+|||+|.++..+++.. .+++++|+++.+++.+++++ ++++++++|+.+. +. .++||+|+
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~~D~s~~~~~~a~~~~---------~~~~~~~~d~~~~-~~-~~~~D~v~ 105 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEF--GDTAGLELSEDMLTHARKRL---------PDATLHQGDMRDF-RL-GRKFSAVV 105 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHH--SEEEEEESCHHHHHHHHHHC---------TTCEEEECCTTTC-CC-SSCEEEEE
T ss_pred CCCCeEEEecccCCHHHHHHHHhC--CcEEEEeCCHHHHHHHHHhC---------CCCEEEECCHHHc-cc-CCCCcEEE
Confidence 456799999999999999988775 38999999999999999875 2588999998763 22 57899999
Q ss_pred ECC-CCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 136 TDS-SDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 136 ~~~-~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
+.. ..++.++.. ....++++++++|||||.+++..
T Consensus 106 ~~~~~~~~~~~~~-~~~~~l~~~~~~L~pgG~l~~~~ 141 (239)
T 3bxo_A 106 SMFSSVGYLKTTE-ELGAAVASFAEHLEPGGVVVVEP 141 (239)
T ss_dssp ECTTGGGGCCSHH-HHHHHHHHHHHTEEEEEEEEECC
T ss_pred EcCchHhhcCCHH-HHHHHHHHHHHhcCCCeEEEEEe
Confidence 543 333332211 11679999999999999999964
No 209
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.47 E-value=9.1e-15 Score=115.73 Aligned_cols=113 Identities=11% Similarity=0.028 Sum_probs=76.1
Q ss_pred CCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCC------------C--------------
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLS------------D-------------- 110 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~------------~-------------- 110 (197)
++.+|||||||+|.....+... +..+|+++|+++.+++.|++++.......+ .
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 149 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSACS-HFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRA 149 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGGG-GCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhhcc-CCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHh
Confidence 5679999999999954433332 236999999999999999887543100000 0
Q ss_pred CCeEEEEcchHHHHhh-----cCCceeEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEE
Q psy4592 111 PRLTVHVGDGFRFMSE-----HQQEFDVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQ 170 (197)
Q Consensus 111 ~~~~~~~~d~~~~~~~-----~~~~~D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~ 170 (197)
..++++.+|+.+.++. ..++||+|++....++.....-....++++++++|||||+|++.
T Consensus 150 ~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~ 214 (289)
T 2g72_A 150 RVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLI 214 (289)
T ss_dssp HEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred hhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 0145677787653331 23569999998876552211001267999999999999999985
No 210
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.46 E-value=5.4e-13 Score=109.30 Aligned_cols=102 Identities=8% Similarity=0.030 Sum_probs=80.2
Q ss_pred CCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhc-C--------
Q psy4592 58 PKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEH-Q-------- 128 (197)
Q Consensus 58 ~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~-~-------- 128 (197)
+.+|||+|||+|.++..+++.. .+|+++|+++.+++.|++++... ..++++++.+|+.+.++.. .
T Consensus 214 ~~~vLDl~cG~G~~~l~la~~~--~~V~gvd~~~~ai~~a~~n~~~n----g~~~v~~~~~d~~~~~~~~~~~~~~~~l~ 287 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALARNF--DRVLATEIAKPSVAAAQYNIAAN----HIDNVQIIRMAAEEFTQAMNGVREFNRLQ 287 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGGGS--SEEEEECCCHHHHHHHHHHHHHT----TCCSEEEECCCSHHHHHHHSSCCCCTTGG
T ss_pred CCEEEEccCCCCHHHHHHHhcC--CEEEEEECCHHHHHHHHHHHHHc----CCCceEEEECCHHHHHHHHhhcccccccc
Confidence 5789999999999999888743 69999999999999999987642 2248999999999876532 1
Q ss_pred ------CceeEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEcCCCC
Q psy4592 129 ------QEFDVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQAGTLW 175 (197)
Q Consensus 129 ------~~~D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~~~~~ 175 (197)
.+||+|++|||... +.+++.+.|+++|.+++.++++.
T Consensus 288 ~~~~~~~~fD~Vv~dPPr~g----------~~~~~~~~l~~~g~ivyvsc~p~ 330 (369)
T 3bt7_A 288 GIDLKSYQCETIFVDPPRSG----------LDSETEKMVQAYPRILYISCNPE 330 (369)
T ss_dssp GSCGGGCCEEEEEECCCTTC----------CCHHHHHHHTTSSEEEEEESCHH
T ss_pred ccccccCCCCEEEECcCccc----------cHHHHHHHHhCCCEEEEEECCHH
Confidence 37999999997431 11456667789999998887753
No 211
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.46 E-value=4.2e-13 Score=100.46 Aligned_cols=90 Identities=19% Similarity=0.188 Sum_probs=71.1
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
.++.+|||+|||+|.++..+++. +..+++++|+++.+++.|++++. +++++++|+.+. .++||+|+
T Consensus 50 ~~~~~vlD~gcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~---------~~~~~~~d~~~~----~~~~D~v~ 115 (200)
T 1ne2_A 50 IGGRSVIDAGTGNGILACGSYLL-GAESVTAFDIDPDAIETAKRNCG---------GVNFMVADVSEI----SGKYDTWI 115 (200)
T ss_dssp SBTSEEEEETCTTCHHHHHHHHT-TBSEEEEEESCHHHHHHHHHHCT---------TSEEEECCGGGC----CCCEEEEE
T ss_pred CCCCEEEEEeCCccHHHHHHHHc-CCCEEEEEECCHHHHHHHHHhcC---------CCEEEECcHHHC----CCCeeEEE
Confidence 45679999999999999998877 44579999999999999999862 689999998763 26899999
Q ss_pred ECCCCCCCCCcccccHHHHHHHHhhc
Q psy4592 136 TDSSDPVGPAESLFQASYFELMSRAL 161 (197)
Q Consensus 136 ~~~~~~~~~~~~l~~~~~~~~~~~~L 161 (197)
++++.++..... ...+++.+.+.+
T Consensus 116 ~~~p~~~~~~~~--~~~~l~~~~~~~ 139 (200)
T 1ne2_A 116 MNPPFGSVVKHS--DRAFIDKAFETS 139 (200)
T ss_dssp ECCCC---------CHHHHHHHHHHE
T ss_pred ECCCchhccCch--hHHHHHHHHHhc
Confidence 999987654321 257899999998
No 212
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.46 E-value=1.3e-13 Score=107.76 Aligned_cols=97 Identities=21% Similarity=0.327 Sum_probs=78.6
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
.++.+|||+|||+|.++..+++..+..+++++|+++.+++.|+++. +++.+..+|+.+ ++...++||+|+
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~---------~~~~~~~~d~~~-~~~~~~~fD~v~ 153 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY---------PQVTFCVASSHR-LPFSDTSMDAII 153 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC---------TTSEEEECCTTS-CSBCTTCEEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC---------CCcEEEEcchhh-CCCCCCceeEEE
Confidence 4567999999999999999988755579999999999999998874 357889999765 333457899999
Q ss_pred ECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEcCC
Q psy4592 136 TDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQAGT 173 (197)
Q Consensus 136 ~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~~~ 173 (197)
+... ..+++++.++|||||.+++....
T Consensus 154 ~~~~-----------~~~l~~~~~~L~pgG~l~~~~~~ 180 (269)
T 1p91_A 154 RIYA-----------PCKAEELARVVKPGGWVITATPG 180 (269)
T ss_dssp EESC-----------CCCHHHHHHHEEEEEEEEEEEEC
T ss_pred EeCC-----------hhhHHHHHHhcCCCcEEEEEEcC
Confidence 8543 12579999999999999987644
No 213
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.45 E-value=1.3e-13 Score=115.84 Aligned_cols=117 Identities=15% Similarity=0.213 Sum_probs=88.1
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCC-ccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHh-hcCCceeE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSV-ESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMS-EHQQEFDV 133 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~-~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~D~ 133 (197)
.++.+|||+|||+|+.+..++...+. .+++++|+++.+++.+++++... ..++++++++|+.+... ...++||+
T Consensus 258 ~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~----g~~~v~~~~~D~~~~~~~~~~~~fD~ 333 (450)
T 2yxl_A 258 KPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRM----GIKIVKPLVKDARKAPEIIGEEVADK 333 (450)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHT----TCCSEEEECSCTTCCSSSSCSSCEEE
T ss_pred CCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHc----CCCcEEEEEcChhhcchhhccCCCCE
Confidence 45679999999999999998875443 69999999999999999987643 23479999999876432 12267999
Q ss_pred EEECCCCCCCC----Cccc--------------ccHHHHHHHHhhcCCCcEEEEEcCCCCc
Q psy4592 134 IITDSSDPVGP----AESL--------------FQASYFELMSRALRPGGIVCSQAGTLWY 176 (197)
Q Consensus 134 I~~~~~~~~~~----~~~l--------------~~~~~~~~~~~~LkpgG~l~~~~~~~~~ 176 (197)
|++|+|..... .+.. ...++++++.+.|||||.+++.+++...
T Consensus 334 Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~~ 394 (450)
T 2yxl_A 334 VLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIFK 394 (450)
T ss_dssp EEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCG
T ss_pred EEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCCh
Confidence 99998763321 1100 0146899999999999999998766443
No 214
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.45 E-value=6.3e-14 Score=113.82 Aligned_cols=108 Identities=13% Similarity=0.169 Sum_probs=85.6
Q ss_pred CCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEEEC
Q psy4592 58 PKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVIITD 137 (197)
Q Consensus 58 ~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~~~ 137 (197)
+.+|||||||+|.++..+++..+..+++++|+ +.+++.+++++... + ..++++++.+|+.+......+.||+|++.
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~--~-~~~~v~~~~~d~~~~~~~~~~~~D~v~~~ 255 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAH--D-LGGRVEFFEKNLLDARNFEGGAADVVMLN 255 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHT--T-CGGGEEEEECCTTCGGGGTTCCEEEEEEE
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhc--C-CCCceEEEeCCcccCcccCCCCccEEEEe
Confidence 67999999999999999998777789999999 88999999876532 1 12479999999876432134569999998
Q ss_pred CCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 138 SSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 138 ~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
...|..++.. ...++++++++|+|||++++..
T Consensus 256 ~vlh~~~~~~--~~~~l~~~~~~L~pgG~l~i~e 287 (352)
T 3mcz_A 256 DCLHYFDARE--AREVIGHAAGLVKPGGALLILT 287 (352)
T ss_dssp SCGGGSCHHH--HHHHHHHHHHTEEEEEEEEEEE
T ss_pred cccccCCHHH--HHHHHHHHHHHcCCCCEEEEEE
Confidence 8776654432 1679999999999999998864
No 215
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.45 E-value=2.6e-13 Score=110.39 Aligned_cols=107 Identities=21% Similarity=0.219 Sum_probs=81.4
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
.++.+|||||||+|.++..+++. +..+++++|+++ +++.|++++... ++ .++++++.+|+.+. +. .++||+|+
T Consensus 49 ~~~~~VLDiGcGtG~ls~~la~~-g~~~V~~vD~s~-~~~~a~~~~~~~--~l-~~~v~~~~~d~~~~-~~-~~~~D~Iv 121 (348)
T 2y1w_A 49 FKDKIVLDVGCGSGILSFFAAQA-GARKIYAVEAST-MAQHAEVLVKSN--NL-TDRIVVIPGKVEEV-SL-PEQVDIII 121 (348)
T ss_dssp TTTCEEEEETCTTSHHHHHHHHT-TCSEEEEEECST-HHHHHHHHHHHT--TC-TTTEEEEESCTTTC-CC-SSCEEEEE
T ss_pred CCcCEEEEcCCCccHHHHHHHhC-CCCEEEEECCHH-HHHHHHHHHHHc--CC-CCcEEEEEcchhhC-CC-CCceeEEE
Confidence 35679999999999999998876 446999999996 888888876532 11 25899999998763 22 36899999
Q ss_pred ECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 136 TDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 136 ~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
++.+.+...... ..+.+.++++.|||||.+++..
T Consensus 122 s~~~~~~~~~~~--~~~~l~~~~~~LkpgG~li~~~ 155 (348)
T 2y1w_A 122 SEPMGYMLFNER--MLESYLHAKKYLKPSGNMFPTI 155 (348)
T ss_dssp ECCCBTTBTTTS--HHHHHHHGGGGEEEEEEEESCE
T ss_pred EeCchhcCChHH--HHHHHHHHHhhcCCCeEEEEec
Confidence 997754432221 1567788999999999998654
No 216
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.45 E-value=1e-13 Score=110.80 Aligned_cols=125 Identities=14% Similarity=0.143 Sum_probs=83.1
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEc----CHHHHHHHHhhcCCCCCCCCCCCeEEEEc-chHHHHhhcCCc
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEI----DNRVIEVSKKYLPGMAVGLSDPRLTVHVG-DGFRFMSEHQQE 130 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~----~~~~~~~a~~~~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~~ 130 (197)
+++.+|||+|||+|.++..+++. .+|++||+ ++.+++.+. ... ...+++.++++ |+.+. ..++
T Consensus 81 ~~g~~VLDlGcG~G~~s~~la~~---~~V~gvD~~~~~~~~~~~~~~--~~~----~~~~~v~~~~~~D~~~l---~~~~ 148 (305)
T 2p41_A 81 TPEGKVVDLGCGRGGWSYYCGGL---KNVREVKGLTKGGPGHEEPIP--MST----YGWNLVRLQSGVDVFFI---PPER 148 (305)
T ss_dssp CCCEEEEEETCTTSHHHHHHHTS---TTEEEEEEECCCSTTSCCCCC--CCS----TTGGGEEEECSCCTTTS---CCCC
T ss_pred CCCCEEEEEcCCCCHHHHHHHhc---CCEEEEeccccCchhHHHHHH--hhh----cCCCCeEEEeccccccC---CcCC
Confidence 45679999999999999998877 48999999 554432111 111 11257999999 87653 2468
Q ss_pred eeEEEECCCCCCCCCcccccH---HHHHHHHhhcCCCcEEEEEcCCCCcChhHHHHHHHHHHhhCCcc
Q psy4592 131 FDVIITDSSDPVGPAESLFQA---SYFELMSRALRPGGIVCSQAGTLWYSLDCVGNTLQHCASVFPRL 195 (197)
Q Consensus 131 ~D~I~~~~~~~~~~~~~l~~~---~~~~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~f~~v 195 (197)
||+|++|...+ ......... ..++.+.++|||||.|++....+. ......++..++..|..+
T Consensus 149 fD~V~sd~~~~-~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~~~~--~~~~~~~l~~l~~~f~~v 213 (305)
T 2p41_A 149 CDTLLCDIGES-SPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVLNPY--MSSVIEKMEALQRKHGGA 213 (305)
T ss_dssp CSEEEECCCCC-CSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEESCCC--SHHHHHHHHHHHHHHCCE
T ss_pred CCEEEECCccc-cCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeCCCC--CchHHHHHHHHHHHcCCE
Confidence 99999998754 211111001 468888999999999998654432 234455666666666654
No 217
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.45 E-value=8.2e-14 Score=112.39 Aligned_cols=106 Identities=19% Similarity=0.189 Sum_probs=84.7
Q ss_pred CCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEEE
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVIIT 136 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~~ 136 (197)
...+|||+|||+|.++..+++..+..+++++|+ |.+++.+++++... + ..+++++..+|+.+ ..+.+||+|++
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~--~-~~~~v~~~~~d~~~---~~p~~~D~v~~ 241 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDT--G-LSGRAQVVVGSFFD---PLPAGAGGYVL 241 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHT--T-CTTTEEEEECCTTS---CCCCSCSEEEE
T ss_pred CCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhc--C-cCcCeEEecCCCCC---CCCCCCcEEEE
Confidence 457999999999999999988777789999999 99999999876532 1 13589999999753 11238999999
Q ss_pred CCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 137 DSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 137 ~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
....|..+++. ..+++++++++|+|||++++..
T Consensus 242 ~~vlh~~~~~~--~~~~l~~~~~~L~pgG~l~i~e 274 (332)
T 3i53_A 242 SAVLHDWDDLS--AVAILRRCAEAAGSGGVVLVIE 274 (332)
T ss_dssp ESCGGGSCHHH--HHHHHHHHHHHHTTTCEEEEEE
T ss_pred ehhhccCCHHH--HHHHHHHHHHhcCCCCEEEEEe
Confidence 88776655432 1679999999999999998864
No 218
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.45 E-value=2e-13 Score=107.99 Aligned_cols=126 Identities=14% Similarity=0.108 Sum_probs=83.4
Q ss_pred EEEEcCee-eeeccchhhHHHHHHhhcccCCCCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCC
Q psy4592 26 ALILDGII-QCTEFDEFSYSEMIAFLPLCSHPNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGM 104 (197)
Q Consensus 26 ~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~ 104 (197)
.+.+++.. .+.++..+....++..+.. ...+.+|||+|||||.++..+++. +..+|++||+++.|++.+.+..
T Consensus 55 ~I~v~g~~~~yvsrg~~Kl~~~l~~~~~--~~~g~~vLDiGcGTG~~t~~L~~~-ga~~V~aVDvs~~mL~~a~r~~--- 128 (291)
T 3hp7_A 55 ELKLKGEKLRYVSRGGLKLEKALAVFNL--SVEDMITIDIGASTGGFTDVMLQN-GAKLVYAVDVGTNQLVWKLRQD--- 128 (291)
T ss_dssp CEEETTCCCCSSSTTHHHHHHHHHHTTC--CCTTCEEEEETCTTSHHHHHHHHT-TCSEEEEECSSSSCSCHHHHTC---
T ss_pred EEEEcccccccccchHHHHHHHHHhcCC--CccccEEEecCCCccHHHHHHHhC-CCCEEEEEECCHHHHHHHHHhC---
Confidence 34444432 2334455555566665543 245679999999999999988877 3469999999999998855432
Q ss_pred CCCCCCCCeEE-EEcchHHHHhh--cCCceeEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEE
Q psy4592 105 AVGLSDPRLTV-HVGDGFRFMSE--HQQEFDVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQ 170 (197)
Q Consensus 105 ~~~~~~~~~~~-~~~d~~~~~~~--~~~~~D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~ 170 (197)
+++.. ...+++..... +..+||+|++|..++.. ...+.+++++|||||.+++.
T Consensus 129 ------~rv~~~~~~ni~~l~~~~l~~~~fD~v~~d~sf~sl-------~~vL~e~~rvLkpGG~lv~l 184 (291)
T 3hp7_A 129 ------DRVRSMEQYNFRYAEPVDFTEGLPSFASIDVSFISL-------NLILPALAKILVDGGQVVAL 184 (291)
T ss_dssp ------TTEEEECSCCGGGCCGGGCTTCCCSEEEECCSSSCG-------GGTHHHHHHHSCTTCEEEEE
T ss_pred ------cccceecccCceecchhhCCCCCCCEEEEEeeHhhH-------HHHHHHHHHHcCcCCEEEEE
Confidence 22222 22343321111 12359999999865422 56889999999999999886
No 219
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.45 E-value=2.3e-13 Score=103.34 Aligned_cols=93 Identities=18% Similarity=0.187 Sum_probs=76.4
Q ss_pred CCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEEEC
Q psy4592 58 PKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVIITD 137 (197)
Q Consensus 58 ~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~~~ 137 (197)
+.+|||+|||+|.++..+++. +++|+++.+++.++++ +++++.+|+.+ ++...++||+|++.
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~------~~vD~s~~~~~~a~~~-----------~~~~~~~d~~~-~~~~~~~fD~v~~~ 109 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK------IGVEPSERMAEIARKR-----------GVFVLKGTAEN-LPLKDESFDFALMV 109 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC------EEEESCHHHHHHHHHT-----------TCEEEECBTTB-CCSCTTCEEEEEEE
T ss_pred CCcEEEeCCCCCHHHHHHHHH------hccCCCHHHHHHHHhc-----------CCEEEEccccc-CCCCCCCeeEEEEc
Confidence 679999999999999887654 8999999999999874 46788888765 23345689999998
Q ss_pred CCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEcC
Q psy4592 138 SSDPVGPAESLFQASYFELMSRALRPGGIVCSQAG 172 (197)
Q Consensus 138 ~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~~ 172 (197)
...++.++. ..+++++.++|+|||.+++...
T Consensus 110 ~~l~~~~~~----~~~l~~~~~~L~pgG~l~i~~~ 140 (219)
T 1vlm_A 110 TTICFVDDP----ERALKEAYRILKKGGYLIVGIV 140 (219)
T ss_dssp SCGGGSSCH----HHHHHHHHHHEEEEEEEEEEEE
T ss_pred chHhhccCH----HHHHHHHHHHcCCCcEEEEEEe
Confidence 876555443 6899999999999999998753
No 220
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.44 E-value=1e-13 Score=113.64 Aligned_cols=97 Identities=23% Similarity=0.319 Sum_probs=72.9
Q ss_pred CCCCeEEEEeCC------chHhHHHHhcC-CCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhh--
Q psy4592 56 PNPKKVLIVGGG------DGGVAREVLKH-PSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSE-- 126 (197)
Q Consensus 56 ~~~~~vLdiG~G------~G~~~~~l~~~-~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-- 126 (197)
.++.+||||||| +|+.+..+++. .+..+|+++|+++.+. . ..++++++++|+.+....
T Consensus 215 ~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~------~-------~~~rI~fv~GDa~dlpf~~~ 281 (419)
T 3sso_A 215 NQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH------V-------DELRIRTIQGDQNDAEFLDR 281 (419)
T ss_dssp TSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG------G-------CBTTEEEEECCTTCHHHHHH
T ss_pred CCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh------h-------cCCCcEEEEecccccchhhh
Confidence 456899999999 66666666653 4668999999999972 1 235899999998763111
Q ss_pred ---cCCceeEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEE
Q psy4592 127 ---HQQEFDVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQ 170 (197)
Q Consensus 127 ---~~~~~D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~ 170 (197)
..++||+|+++.. +...+ ...+|++++++|||||++++.
T Consensus 282 l~~~d~sFDlVisdgs-H~~~d----~~~aL~el~rvLKPGGvlVi~ 323 (419)
T 3sso_A 282 IARRYGPFDIVIDDGS-HINAH----VRTSFAALFPHVRPGGLYVIE 323 (419)
T ss_dssp HHHHHCCEEEEEECSC-CCHHH----HHHHHHHHGGGEEEEEEEEEE
T ss_pred hhcccCCccEEEECCc-ccchh----HHHHHHHHHHhcCCCeEEEEE
Confidence 1478999999864 33222 267899999999999999996
No 221
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.44 E-value=1.4e-12 Score=102.21 Aligned_cols=128 Identities=16% Similarity=0.147 Sum_probs=89.3
Q ss_pred CCCeEEEEeCCc--hHhHHHHh-cCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHh---hc--C
Q psy4592 57 NPKKVLIVGGGD--GGVAREVL-KHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMS---EH--Q 128 (197)
Q Consensus 57 ~~~~vLdiG~G~--G~~~~~l~-~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~---~~--~ 128 (197)
...+|||||||+ +..+.+++ +..+..+|++||.||.|++.|++.+... ...+++++++|+++... .. .
T Consensus 78 g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~----~~~~~~~v~aD~~~~~~~l~~~~~~ 153 (277)
T 3giw_A 78 GIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLAST----PEGRTAYVEADMLDPASILDAPELR 153 (277)
T ss_dssp CCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCC----SSSEEEEEECCTTCHHHHHTCHHHH
T ss_pred CCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccC----CCCcEEEEEecccChhhhhcccccc
Confidence 447999999997 44445444 3346689999999999999999987531 12479999999987521 11 2
Q ss_pred Ccee-----EEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEcCCCCcChhHHHHHHHHHH
Q psy4592 129 QEFD-----VIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQAGTLWYSLDCVGNTLQHCA 189 (197)
Q Consensus 129 ~~~D-----~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~ 189 (197)
+.|| .|+++...|+.++..- ....++.+++.|+|||+|++...+.....+..+.+.+.++
T Consensus 154 ~~~D~~~p~av~~~avLH~l~d~~~-p~~~l~~l~~~L~PGG~Lvls~~~~d~~p~~~~~~~~~~~ 218 (277)
T 3giw_A 154 DTLDLTRPVALTVIAIVHFVLDEDD-AVGIVRRLLEPLPSGSYLAMSIGTAEFAPQEVGRVAREYA 218 (277)
T ss_dssp TTCCTTSCCEEEEESCGGGSCGGGC-HHHHHHHHHTTSCTTCEEEEEEECCTTSHHHHHHHHHHHH
T ss_pred cccCcCCcchHHhhhhHhcCCchhh-HHHHHHHHHHhCCCCcEEEEEeccCCCCHHHHHHHHHHHH
Confidence 4465 5888888888766421 1579999999999999999976443333344455545444
No 222
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.44 E-value=4.7e-14 Score=114.55 Aligned_cols=126 Identities=16% Similarity=0.150 Sum_probs=89.7
Q ss_pred CCCeEEEEeCCchHhHHHHhcCCCC-----ccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCce
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKHPSV-----ESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEF 131 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~~~~-----~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 131 (197)
.+.+|||+|||+|.++..+++..+. .+++++|+++.+++.|+.++... +.++++.++|+... ...++|
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~-----g~~~~i~~~D~l~~--~~~~~f 202 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQ-----RQKMTLLHQDGLAN--LLVDPV 202 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHH-----TCCCEEEESCTTSC--CCCCCE
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhC-----CCCceEEECCCCCc--cccCCc
Confidence 4579999999999999888765332 68999999999999999986532 22688999997542 224689
Q ss_pred eEEEECCCCCCCCCc------------cc--ccHHHHHHHHhhcCCCcEEEEEcCCCCcChhHHHHHHHHHH
Q psy4592 132 DVIITDSSDPVGPAE------------SL--FQASYFELMSRALRPGGIVCSQAGTLWYSLDCVGNTLQHCA 189 (197)
Q Consensus 132 D~I~~~~~~~~~~~~------------~l--~~~~~~~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~ 189 (197)
|+|++|||....+.. .. ....+++.+.+.|+|||++++.+.+.+........+.+.+.
T Consensus 203 D~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~~~~~~~~~~ir~~l~ 274 (344)
T 2f8l_A 203 DVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDAMFGTSDFAKVDKFIK 274 (344)
T ss_dssp EEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGGGGGSTTHHHHHHHHH
T ss_pred cEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECchhcCCchHHHHHHHHH
Confidence 999999986432111 00 11258999999999999998887554444333444444443
No 223
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.43 E-value=1.7e-13 Score=113.73 Aligned_cols=103 Identities=14% Similarity=0.047 Sum_probs=78.7
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
.++.+|||||||+|.++..+++.. .+++++|+++++++.|++... ......+...++ +.++...++||+|+
T Consensus 106 ~~~~~VLDiGcG~G~~~~~l~~~g--~~v~gvD~s~~~~~~a~~~~~------~~~~~~~~~~~~-~~l~~~~~~fD~I~ 176 (416)
T 4e2x_A 106 GPDPFIVEIGCNDGIMLRTIQEAG--VRHLGFEPSSGVAAKAREKGI------RVRTDFFEKATA-DDVRRTEGPANVIY 176 (416)
T ss_dssp SSSCEEEEETCTTTTTHHHHHHTT--CEEEEECCCHHHHHHHHTTTC------CEECSCCSHHHH-HHHHHHHCCEEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHcC--CcEEEECCCHHHHHHHHHcCC------CcceeeechhhH-hhcccCCCCEEEEE
Confidence 456799999999999999988764 599999999999999988621 111111222333 33444457999999
Q ss_pred ECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 136 TDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 136 ~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
+....++.++. ..++++++++|||||++++..
T Consensus 177 ~~~vl~h~~d~----~~~l~~~~r~LkpgG~l~i~~ 208 (416)
T 4e2x_A 177 AANTLCHIPYV----QSVLEGVDALLAPDGVFVFED 208 (416)
T ss_dssp EESCGGGCTTH----HHHHHHHHHHEEEEEEEEEEE
T ss_pred ECChHHhcCCH----HHHHHHHHHHcCCCeEEEEEe
Confidence 99887776654 789999999999999999975
No 224
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.43 E-value=3.3e-13 Score=110.54 Aligned_cols=107 Identities=20% Similarity=0.234 Sum_probs=85.3
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
..+.+|||+|||+|.++..+++..+..+++++|+ |.+++.|++++... + ..++++++.+|+.+ ..+.+||+|+
T Consensus 201 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~--~-l~~~v~~~~~d~~~---~~p~~~D~v~ 273 (369)
T 3gwz_A 201 SGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGR--G-LADRCEILPGDFFE---TIPDGADVYL 273 (369)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHT--T-CTTTEEEEECCTTT---CCCSSCSEEE
T ss_pred ccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhc--C-cCCceEEeccCCCC---CCCCCceEEE
Confidence 4568999999999999999998777789999999 99999999876532 1 13589999999862 2223799999
Q ss_pred ECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 136 TDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 136 ~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
+....+..++.. ..+++++++++|+|||++++..
T Consensus 274 ~~~vlh~~~d~~--~~~~L~~~~~~L~pgG~l~i~e 307 (369)
T 3gwz_A 274 IKHVLHDWDDDD--VVRILRRIATAMKPDSRLLVID 307 (369)
T ss_dssp EESCGGGSCHHH--HHHHHHHHHTTCCTTCEEEEEE
T ss_pred hhhhhccCCHHH--HHHHHHHHHHHcCCCCEEEEEE
Confidence 988776654431 1369999999999999998854
No 225
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.43 E-value=6.2e-13 Score=117.02 Aligned_cols=112 Identities=14% Similarity=0.165 Sum_probs=84.9
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCC-CCccEEEEEcCHHHHHHHHhhcCCCC--CCCCCCCeEEEEcchHHHHhhcCCcee
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHP-SVESAYLVEIDNRVIEVSKKYLPGMA--VGLSDPRLTVHVGDGFRFMSEHQQEFD 132 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~-~~~~v~~ve~~~~~~~~a~~~~~~~~--~~~~~~~~~~~~~d~~~~~~~~~~~~D 132 (197)
.++.+|||||||+|.++..+++.. +..++++||+++.+++.|++++.... .....++++++++|+.+. +...++||
T Consensus 720 ~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dL-p~~d~sFD 798 (950)
T 3htx_A 720 SSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEF-DSRLHDVD 798 (950)
T ss_dssp SCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSC-CTTSCSCC
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhC-CcccCCee
Confidence 366799999999999999999876 44699999999999999988532100 001235899999998763 34457899
Q ss_pred EEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 133 VIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 133 ~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
+|++....++.+++. ...++++++++|||| .+++.+
T Consensus 799 lVV~~eVLeHL~dp~--l~~~L~eI~RvLKPG-~LIIST 834 (950)
T 3htx_A 799 IGTCLEVIEHMEEDQ--ACEFGEKVLSLFHPK-LLIVST 834 (950)
T ss_dssp EEEEESCGGGSCHHH--HHHHHHHHHHTTCCS-EEEEEE
T ss_pred EEEEeCchhhCChHH--HHHHHHHHHHHcCCC-EEEEEe
Confidence 999987766655432 146899999999999 666654
No 226
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.42 E-value=9.8e-13 Score=107.92 Aligned_cols=110 Identities=14% Similarity=0.111 Sum_probs=81.9
Q ss_pred CCCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEE
Q psy4592 55 HPNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVI 134 (197)
Q Consensus 55 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I 134 (197)
..++.+|||+|||+|.++.++++.....+++++|+|+.+++.|++++... ++ .+++++.++|+.+. +...++||+|
T Consensus 215 ~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~--gl-~~~i~~~~~D~~~~-~~~~~~fD~I 290 (373)
T 3tm4_A 215 ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAA--GV-LDKIKFIQGDATQL-SQYVDSVDFA 290 (373)
T ss_dssp TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHT--TC-GGGCEEEECCGGGG-GGTCSCEEEE
T ss_pred cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHc--CC-CCceEEEECChhhC-CcccCCcCEE
Confidence 35667999999999999999998765459999999999999999987642 11 24799999999874 3445789999
Q ss_pred EECCCCCCCCC-----cccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 135 ITDSSDPVGPA-----ESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 135 ~~~~~~~~~~~-----~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
++|+|...... ..++ .++++.++++| +|.+++.+
T Consensus 291 i~npPyg~r~~~~~~~~~ly-~~~~~~l~r~l--~g~~~~i~ 329 (373)
T 3tm4_A 291 ISNLPYGLKIGKKSMIPDLY-MKFFNELAKVL--EKRGVFIT 329 (373)
T ss_dssp EEECCCC------CCHHHHH-HHHHHHHHHHE--EEEEEEEE
T ss_pred EECCCCCcccCcchhHHHHH-HHHHHHHHHHc--CCeEEEEE
Confidence 99998654211 1111 56888899988 55555443
No 227
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.42 E-value=3.6e-13 Score=110.16 Aligned_cols=108 Identities=26% Similarity=0.319 Sum_probs=84.3
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
.++.+|||+|||+|.++..+++..+..+++++|+ +.+++.|++++... + ..++++++.+|+.+.+ ...||+|+
T Consensus 181 ~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~--~-~~~~v~~~~~d~~~~~---~~~~D~v~ 253 (374)
T 1qzz_A 181 SAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADA--G-LADRVTVAEGDFFKPL---PVTADVVL 253 (374)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHT--T-CTTTEEEEECCTTSCC---SCCEEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhc--C-CCCceEEEeCCCCCcC---CCCCCEEE
Confidence 4567999999999999999988766689999999 99999999886532 1 1247999999986522 23599999
Q ss_pred ECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEcC
Q psy4592 136 TDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQAG 172 (197)
Q Consensus 136 ~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~~ 172 (197)
+....+..++.. ...++++++++|||||++++...
T Consensus 254 ~~~vl~~~~~~~--~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 254 LSFVLLNWSDED--ALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp EESCGGGSCHHH--HHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EeccccCCCHHH--HHHHHHHHHHhcCCCcEEEEEec
Confidence 988766544331 14799999999999999887543
No 228
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.42 E-value=5.5e-13 Score=109.47 Aligned_cols=105 Identities=22% Similarity=0.256 Sum_probs=84.5
Q ss_pred CCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCC-------------CCCCCCeEEEEcchHHH
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAV-------------GLSDPRLTVHVGDGFRF 123 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~-------------~~~~~~~~~~~~d~~~~ 123 (197)
.+.+|||+|||+|..+..+++..+..+++++|+++++++.+++|+..... ++ .+++++++|+.++
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl--~~i~v~~~Da~~~ 124 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGE--KTIVINHDDANRL 124 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESS--SEEEEEESCHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCC--CceEEEcCcHHHH
Confidence 56799999999999999988865556899999999999999998764200 11 2499999999987
Q ss_pred HhhcCCceeEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 124 MSEHQQEFDVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 124 ~~~~~~~~D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
+....++||+|+.||+.. ...+++.+.+.|++||.+++..
T Consensus 125 ~~~~~~~fD~I~lDP~~~--------~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 125 MAERHRYFHFIDLDPFGS--------PMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp HHHSTTCEEEEEECCSSC--------CHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHhccCCCCEEEeCCCCC--------HHHHHHHHHHhcCCCCEEEEEe
Confidence 765446899999998521 1579999999999999888754
No 229
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.41 E-value=7.6e-13 Score=107.84 Aligned_cols=107 Identities=20% Similarity=0.210 Sum_probs=84.0
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
.++.+|||||||+|.++..+++..+..+++++|+ +.+++.+++++... + ...+++++.+|+.+. + ...+|+|+
T Consensus 189 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~--~-~~~~v~~~~~d~~~~-~--~~~~D~v~ 261 (359)
T 1x19_A 189 DGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEK--G-VADRMRGIAVDIYKE-S--YPEADAVL 261 (359)
T ss_dssp TTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHT--T-CTTTEEEEECCTTTS-C--CCCCSEEE
T ss_pred CCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhc--C-CCCCEEEEeCccccC-C--CCCCCEEE
Confidence 4567999999999999999998777689999999 99999999886531 1 124699999998653 2 23459999
Q ss_pred ECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 136 TDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 136 ~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
+....+..++.. ...++++++++|||||++++..
T Consensus 262 ~~~vlh~~~d~~--~~~~l~~~~~~L~pgG~l~i~e 295 (359)
T 1x19_A 262 FCRILYSANEQL--STIMCKKAFDAMRSGGRLLILD 295 (359)
T ss_dssp EESCGGGSCHHH--HHHHHHHHHTTCCTTCEEEEEE
T ss_pred EechhccCCHHH--HHHHHHHHHHhcCCCCEEEEEe
Confidence 988766554421 2678999999999999997654
No 230
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.39 E-value=3.3e-13 Score=108.83 Aligned_cols=104 Identities=14% Similarity=0.213 Sum_probs=83.2
Q ss_pred CeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEEECC
Q psy4592 59 KKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVIITDS 138 (197)
Q Consensus 59 ~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~~~~ 138 (197)
.+|||+|||+|..+..+++..+..+++++|+ +.+++.+++++... + ..++++++.+|+.+ + ..++||+|++..
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~--~-~~~~v~~~~~d~~~--~-~~~~~D~v~~~~ 241 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSL--L-AGERVSLVGGDMLQ--E-VPSNGDIYLLSR 241 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHH--H-HTTSEEEEESCTTT--C-CCSSCSEEEEES
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhc--C-CCCcEEEecCCCCC--C-CCCCCCEEEEch
Confidence 7999999999999999988766689999999 99999999876431 0 12579999999865 2 236799999988
Q ss_pred CCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 139 SDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 139 ~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
..|..++.. ...++++++++|+|||++++..
T Consensus 242 vl~~~~~~~--~~~~l~~~~~~L~pgG~l~i~e 272 (334)
T 2ip2_A 242 IIGDLDEAA--SLRLLGNCREAMAGDGRVVVIE 272 (334)
T ss_dssp CGGGCCHHH--HHHHHHHHHHHSCTTCEEEEEE
T ss_pred hccCCCHHH--HHHHHHHHHHhcCCCCEEEEEE
Confidence 776544331 1479999999999999998874
No 231
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.38 E-value=4.7e-13 Score=108.98 Aligned_cols=107 Identities=28% Similarity=0.413 Sum_probs=83.4
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
.++.+|||+|||+|.++..+++..+..+++++|+ +.+++.+++++... + ..++++++.+|+.+.+ ...||+|+
T Consensus 182 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~--~-~~~~v~~~~~d~~~~~---~~~~D~v~ 254 (360)
T 1tw3_A 182 TNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDE--G-LSDRVDVVEGDFFEPL---PRKADAII 254 (360)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHT--T-CTTTEEEEECCTTSCC---SSCEEEEE
T ss_pred ccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhc--C-CCCceEEEeCCCCCCC---CCCccEEE
Confidence 4567999999999999999988776679999999 99999999886532 1 1247999999986522 23599999
Q ss_pred ECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 136 TDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 136 ~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
+....|..++.. ...++++++++|||||++++..
T Consensus 255 ~~~vl~~~~~~~--~~~~l~~~~~~L~pgG~l~i~e 288 (360)
T 1tw3_A 255 LSFVLLNWPDHD--AVRILTRCAEALEPGGRILIHE 288 (360)
T ss_dssp EESCGGGSCHHH--HHHHHHHHHHTEEEEEEEEEEE
T ss_pred EcccccCCCHHH--HHHHHHHHHHhcCCCcEEEEEE
Confidence 987765543321 1479999999999999988764
No 232
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.38 E-value=3.1e-12 Score=101.00 Aligned_cols=109 Identities=12% Similarity=0.064 Sum_probs=75.6
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEc-CHHHHHHHHhhc-----CCCCCCCC---CCCeEEEEcc----hHH
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEI-DNRVIEVSKKYL-----PGMAVGLS---DPRLTVHVGD----GFR 122 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~-~~~~~~~a~~~~-----~~~~~~~~---~~~~~~~~~d----~~~ 122 (197)
..+.+|||+|||+|.++..+++.. ..+++++|+ ++.+++.|+++. ... ++. .+++++...| ..+
T Consensus 78 ~~~~~vLDlG~G~G~~~~~~a~~~-~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~--~~~~~~~~~v~~~~~~~~~~~~~ 154 (281)
T 3bzb_A 78 IAGKTVCELGAGAGLVSIVAFLAG-ADQVVATDYPDPEILNSLESNIREHTANSC--SSETVKRASPKVVPYRWGDSPDS 154 (281)
T ss_dssp TTTCEEEETTCTTSHHHHHHHHTT-CSEEEEEECSCHHHHHHHHHHHHTTCC------------CCCEEEECCTTSCTHH
T ss_pred cCCCeEEEecccccHHHHHHHHcC-CCEEEEEeCCCHHHHHHHHHHHHHhhhhhc--ccccCCCCCeEEEEecCCCccHH
Confidence 355799999999999999888764 359999999 899999999987 321 111 0367887544 222
Q ss_pred HHhh-cCCceeEEEECCCCCCCCCcccccHHHHHHHHhhcC---C--CcEEEEEc
Q psy4592 123 FMSE-HQQEFDVIITDSSDPVGPAESLFQASYFELMSRALR---P--GGIVCSQA 171 (197)
Q Consensus 123 ~~~~-~~~~~D~I~~~~~~~~~~~~~l~~~~~~~~~~~~Lk---p--gG~l~~~~ 171 (197)
.... ..++||+|++.-..+..+.. ..+++.+.++|+ | ||.+++..
T Consensus 155 ~~~~~~~~~fD~Ii~~dvl~~~~~~----~~ll~~l~~~Lk~~~p~~gG~l~v~~ 205 (281)
T 3bzb_A 155 LQRCTGLQRFQVVLLADLLSFHQAH----DALLRSVKMLLALPANDPTAVALVTF 205 (281)
T ss_dssp HHHHHSCSSBSEEEEESCCSCGGGH----HHHHHHHHHHBCCTTTCTTCEEEEEE
T ss_pred HHhhccCCCCCEEEEeCcccChHHH----HHHHHHHHHHhcccCCCCCCEEEEEE
Confidence 2221 25789999984333332222 679999999999 9 99876643
No 233
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.38 E-value=2.6e-13 Score=109.34 Aligned_cols=108 Identities=19% Similarity=0.213 Sum_probs=83.4
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
.++.+|||+|||+|.++..+++..+..+++++|++ .+++.|++++... + ..++++++.+|+.+. +. .+.||+|+
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~--~-~~~~v~~~~~d~~~~-~~-~~~~D~v~ 237 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQ--G-VASRYHTIAGSAFEV-DY-GNDYDLVL 237 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHH--T-CGGGEEEEESCTTTS-CC-CSCEEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhc--C-CCcceEEEecccccC-CC-CCCCcEEE
Confidence 45679999999999999999887666899999999 9999999876432 1 124799999998653 22 34599999
Q ss_pred ECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 136 TDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 136 ~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
+....+..++.. ..+++++++++|+|||++++..
T Consensus 238 ~~~~l~~~~~~~--~~~~l~~~~~~L~pgG~l~i~e 271 (335)
T 2r3s_A 238 LPNFLHHFDVAT--CEQLLRKIKTALAVEGKVIVFD 271 (335)
T ss_dssp EESCGGGSCHHH--HHHHHHHHHHHEEEEEEEEEEE
T ss_pred EcchhccCCHHH--HHHHHHHHHHhCCCCcEEEEEe
Confidence 977665543321 1579999999999999888764
No 234
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.37 E-value=4.4e-13 Score=113.28 Aligned_cols=107 Identities=21% Similarity=0.219 Sum_probs=80.2
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
.++.+|||||||+|.++..+++. +..+++++|+++ +++.|++++... ++ .++++++.+|+.+. +. .++||+|+
T Consensus 157 ~~~~~VLDiGcGtG~la~~la~~-~~~~V~gvD~s~-~l~~A~~~~~~~--gl-~~~v~~~~~d~~~~-~~-~~~fD~Iv 229 (480)
T 3b3j_A 157 FKDKIVLDVGCGSGILSFFAAQA-GARKIYAVEAST-MAQHAEVLVKSN--NL-TDRIVVIPGKVEEV-SL-PEQVDIII 229 (480)
T ss_dssp TTTCEEEEESCSTTHHHHHHHHT-TCSEEEEEECHH-HHHHHHHHHHHT--TC-TTTEEEEESCTTTC-CC-SSCEEEEE
T ss_pred cCCCEEEEecCcccHHHHHHHHc-CCCEEEEEEcHH-HHHHHHHHHHHc--CC-CCcEEEEECchhhC-cc-CCCeEEEE
Confidence 35679999999999999988875 447999999998 999998876542 11 25899999998763 22 36899999
Q ss_pred ECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 136 TDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 136 ~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
++++.+...... ..+.+..+++.|||||.+++..
T Consensus 230 s~~~~~~~~~e~--~~~~l~~~~~~LkpgG~li~~~ 263 (480)
T 3b3j_A 230 SEPMGYMLFNER--MLESYLHAKKYLKPSGNMFPTI 263 (480)
T ss_dssp CCCCHHHHTCHH--HHHHHHHGGGGEEEEEEEESCE
T ss_pred EeCchHhcCcHH--HHHHHHHHHHhcCCCCEEEEEe
Confidence 987633222211 1456678899999999998644
No 235
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.37 E-value=1e-12 Score=104.02 Aligned_cols=91 Identities=23% Similarity=0.338 Sum_probs=68.5
Q ss_pred hHHHHHHhhcccCCCCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchH
Q psy4592 42 SYSEMIAFLPLCSHPNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGF 121 (197)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~ 121 (197)
....++..+.. .++.+|||||||+|.++..+++.. .+++++|+|+.+++.+++++... + ..++++++++|+.
T Consensus 16 i~~~i~~~~~~---~~~~~VLDiG~G~G~lt~~L~~~~--~~v~~vD~~~~~~~~a~~~~~~~--~-~~~~v~~~~~D~~ 87 (285)
T 1zq9_A 16 IINSIIDKAAL---RPTDVVLEVGPGTGNMTVKLLEKA--KKVVACELDPRLVAELHKRVQGT--P-VASKLQVLVGDVL 87 (285)
T ss_dssp HHHHHHHHTCC---CTTCEEEEECCTTSTTHHHHHHHS--SEEEEEESCHHHHHHHHHHHTTS--T-TGGGEEEEESCTT
T ss_pred HHHHHHHhcCC---CCCCEEEEEcCcccHHHHHHHhhC--CEEEEEECCHHHHHHHHHHHHhc--C-CCCceEEEEccee
Confidence 33455544432 456799999999999999998774 58999999999999999987531 1 1257999999986
Q ss_pred HHHhhcCCceeEEEECCCCCCC
Q psy4592 122 RFMSEHQQEFDVIITDSSDPVG 143 (197)
Q Consensus 122 ~~~~~~~~~~D~I~~~~~~~~~ 143 (197)
+. + ..+||+|+++++.++.
T Consensus 88 ~~-~--~~~fD~vv~nlpy~~~ 106 (285)
T 1zq9_A 88 KT-D--LPFFDTCVANLPYQIS 106 (285)
T ss_dssp TS-C--CCCCSEEEEECCGGGH
T ss_pred cc-c--chhhcEEEEecCcccc
Confidence 53 2 2479999999876553
No 236
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.37 E-value=1.2e-12 Score=107.76 Aligned_cols=104 Identities=24% Similarity=0.294 Sum_probs=84.4
Q ss_pred CCCeEEEEeCCchHhHHHHhcCC-CCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCC-eEEEEcchHHHHh-hcCCceeE
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKHP-SVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPR-LTVHVGDGFRFMS-EHQQEFDV 133 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~~-~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~-~~~~~~d~~~~~~-~~~~~~D~ 133 (197)
++.+|||++||+|.++..+++.. +..+|+++|+++..++.+++|+..+ ++. .+ ++++.+|+.+++. ...++||+
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~N--gl~-~~~v~v~~~Da~~~l~~~~~~~fD~ 128 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLN--NIP-EDRYEIHGMEANFFLRKEWGFGFDY 128 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHT--TCC-GGGEEEECSCHHHHHHSCCSSCEEE
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHh--CCC-CceEEEEeCCHHHHHHHhhCCCCcE
Confidence 45799999999999999988753 3368999999999999999998753 222 24 9999999999887 54568999
Q ss_pred EEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 134 IITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 134 I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
|++||+. . ...+++.+.+.|+|||++++..
T Consensus 129 V~lDP~g--~------~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 129 VDLDPFG--T------PVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp EEECCSS--C------CHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEECCCc--C------HHHHHHHHHHHhCCCCEEEEEe
Confidence 9999931 1 1568999999999999888764
No 237
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=99.36 E-value=2.3e-12 Score=100.49 Aligned_cols=116 Identities=17% Similarity=0.170 Sum_probs=83.1
Q ss_pred CCCCeEEEEeCCchHhHHHHhcC-------CC-----CccEEEEEcCH---H-----------HHHHHHhhcCCCCCC--
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKH-------PS-----VESAYLVEIDN---R-----------VIEVSKKYLPGMAVG-- 107 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~-------~~-----~~~v~~ve~~~---~-----------~~~~a~~~~~~~~~~-- 107 (197)
+++.+|||+|+|+|..+..+++. .+ ..+++++|..| + +.+.+++.+..|...
T Consensus 59 ~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~ 138 (257)
T 2qy6_A 59 HPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLP 138 (257)
T ss_dssp SSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCS
T ss_pred CCCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhcccccc
Confidence 34569999999999988775542 33 25899999887 3 333555544332100
Q ss_pred ------CC--CCCeEEEEcchHHHHhhcCC----ceeEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEcC
Q psy4592 108 ------LS--DPRLTVHVGDGFRFMSEHQQ----EFDVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQAG 172 (197)
Q Consensus 108 ------~~--~~~~~~~~~d~~~~~~~~~~----~~D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~~ 172 (197)
+. ..+++++.+|+.+.++...+ +||+|+.|++.+.. ++.++++++++.++++|+|||+|+..+.
T Consensus 139 g~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~-~p~lw~~~~l~~l~~~L~pGG~l~tysa 214 (257)
T 2qy6_A 139 GCHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAK-NPDMWTQNLFNAMARLARPGGTLATFTS 214 (257)
T ss_dssp EEEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTT-CGGGCCHHHHHHHHHHEEEEEEEEESCC
T ss_pred chhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCccc-ChhhcCHHHHHHHHHHcCCCcEEEEEeC
Confidence 11 24688999999998776433 79999999865543 4467889999999999999999997553
No 238
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.36 E-value=3.2e-13 Score=112.07 Aligned_cols=119 Identities=19% Similarity=0.298 Sum_probs=85.3
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCC-CCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHP-SVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVI 134 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~-~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I 134 (197)
..+.+|||+|||+|.++..+++.. +..+++++|+++.+++.| .+++++++|+.++. ..++||+|
T Consensus 38 ~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a-------------~~~~~~~~D~~~~~--~~~~fD~I 102 (421)
T 2ih2_A 38 PRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP-------------PWAEGILADFLLWE--PGEAFDLI 102 (421)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC-------------TTEEEEESCGGGCC--CSSCEEEE
T ss_pred CCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC-------------CCCcEEeCChhhcC--ccCCCCEE
Confidence 345699999999999999988653 347999999999987654 36889999987642 23689999
Q ss_pred EECCCCCCCCC---------ccc----------------ccHHHHHHHHhhcCCCcEEEEEcCCCCcChhHHHHHHHHHH
Q psy4592 135 ITDSSDPVGPA---------ESL----------------FQASYFELMSRALRPGGIVCSQAGTLWYSLDCVGNTLQHCA 189 (197)
Q Consensus 135 ~~~~~~~~~~~---------~~l----------------~~~~~~~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~ 189 (197)
++|||...... ... ....+++.+.++|+|||.+++.....+......+.+.+.+.
T Consensus 103 i~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~~~l~~~~~~~lr~~l~ 182 (421)
T 2ih2_A 103 LGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPATWLVLEDFALLREFLA 182 (421)
T ss_dssp EECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEGGGGTCGGGHHHHHHHH
T ss_pred EECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEChHHhcCccHHHHHHHHH
Confidence 99998643221 000 01267999999999999999887665553334444444443
No 239
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.35 E-value=5.1e-12 Score=101.10 Aligned_cols=116 Identities=13% Similarity=0.070 Sum_probs=84.1
Q ss_pred CCCCeEEEEeCCchHhHHHHhcC-CCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhc--CCcee
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKH-PSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEH--QQEFD 132 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~-~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~--~~~~D 132 (197)
.++.+|||+|||+|+.+..++.. .+..+|+++|+++.+++.+++++... ...+++++++|+.+..... ..+||
T Consensus 101 ~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~----g~~~v~~~~~D~~~~~~~~~~~~~fD 176 (309)
T 2b9e_A 101 PPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARA----GVSCCELAEEDFLAVSPSDPRYHEVH 176 (309)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHT----TCCSEEEEECCGGGSCTTCGGGTTEE
T ss_pred CCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHc----CCCeEEEEeCChHhcCccccccCCCC
Confidence 45679999999999999998874 23479999999999999999988653 2257999999987643221 15799
Q ss_pred EEEECCCCCCC------CCc---------cc-----ccHHHHHHHHhhcCCCcEEEEEcCCCCc
Q psy4592 133 VIITDSSDPVG------PAE---------SL-----FQASYFELMSRALRPGGIVCSQAGTLWY 176 (197)
Q Consensus 133 ~I~~~~~~~~~------~~~---------~l-----~~~~~~~~~~~~LkpgG~l~~~~~~~~~ 176 (197)
.|++|+|.... ++. .+ ...++++.+.+.|+ ||+++..+++...
T Consensus 177 ~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~~~ 239 (309)
T 2b9e_A 177 YILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSLCQ 239 (309)
T ss_dssp EEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCCCG
T ss_pred EEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCCCh
Confidence 99999885321 110 00 01346778888887 9999988776443
No 240
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.35 E-value=1.8e-12 Score=99.77 Aligned_cols=117 Identities=14% Similarity=0.095 Sum_probs=76.7
Q ss_pred eccchhhHHHHHHhhcccCCCCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEE
Q psy4592 36 TEFDEFSYSEMIAFLPLCSHPNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTV 115 (197)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~ 115 (197)
.++..+...+++..+.. ...+++|||||||+|.++..+++.. ..+++++|++++|++.++++.+. +..
T Consensus 18 vsrg~~kL~~~L~~~~~--~~~g~~VLDiGcGtG~~t~~la~~g-~~~V~gvDis~~ml~~a~~~~~~---------~~~ 85 (232)
T 3opn_A 18 VSRGGLKLEKALKEFHL--EINGKTCLDIGSSTGGFTDVMLQNG-AKLVYALDVGTNQLAWKIRSDER---------VVV 85 (232)
T ss_dssp SSTTHHHHHHHHHHTTC--CCTTCEEEEETCTTSHHHHHHHHTT-CSEEEEECSSCCCCCHHHHTCTT---------EEE
T ss_pred cCCcHHHHHHHHHHcCC--CCCCCEEEEEccCCCHHHHHHHhcC-CCEEEEEcCCHHHHHHHHHhCcc---------ccc
Confidence 34455555566665542 2456799999999999999988873 35999999999999998875432 111
Q ss_pred E-EcchHHHH-hh-cCCceeEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 116 H-VGDGFRFM-SE-HQQEFDVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 116 ~-~~d~~~~~-~~-~~~~~D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
. ..+++... .. ....+|.+.+|...... ..++++++++|||||.+++..
T Consensus 86 ~~~~~~~~~~~~~~~~~~~d~~~~D~v~~~l-------~~~l~~i~rvLkpgG~lv~~~ 137 (232)
T 3opn_A 86 MEQFNFRNAVLADFEQGRPSFTSIDVSFISL-------DLILPPLYEILEKNGEVAALI 137 (232)
T ss_dssp ECSCCGGGCCGGGCCSCCCSEEEECCSSSCG-------GGTHHHHHHHSCTTCEEEEEE
T ss_pred cccceEEEeCHhHcCcCCCCEEEEEEEhhhH-------HHHHHHHHHhccCCCEEEEEE
Confidence 1 11221110 01 11236777766643221 568899999999999998853
No 241
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.34 E-value=8.7e-13 Score=103.81 Aligned_cols=111 Identities=14% Similarity=0.168 Sum_probs=76.6
Q ss_pred CCCeEEEEeCCchH----hHHHHhcCCC----CccEEEEEcCHHHHHHHHhhcC---------------------CCCCC
Q psy4592 57 NPKKVLIVGGGDGG----VAREVLKHPS----VESAYLVEIDNRVIEVSKKYLP---------------------GMAVG 107 (197)
Q Consensus 57 ~~~~vLdiG~G~G~----~~~~l~~~~~----~~~v~~ve~~~~~~~~a~~~~~---------------------~~~~~ 107 (197)
++.+|||+|||||. ++..+.+..+ ..+|+++|+|+++++.|++..- ....+
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 35799999999998 4444444312 3589999999999999998641 00000
Q ss_pred -C--C---CCCeEEEEcchHHHHhhc-CCceeEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEE
Q psy4592 108 -L--S---DPRLTVHVGDGFRFMSEH-QQEFDVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQ 170 (197)
Q Consensus 108 -~--~---~~~~~~~~~d~~~~~~~~-~~~~D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~ 170 (197)
+ . ..++.+.++|+.+. +.. .++||+|+|.....+..+.. ..+.++.+++.|+|||++++-
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~-~~~~~~~fDlI~crnvliyf~~~~--~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEK-QYNVPGPFDAIFCRNVMIYFDKTT--QEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCS-SCCCCCCEEEEEECSSGGGSCHHH--HHHHHHHHGGGEEEEEEEEEC
T ss_pred ceeechhhcccCeEEecccCCC-CCCcCCCeeEEEECCchHhCCHHH--HHHHHHHHHHHhCCCcEEEEE
Confidence 0 0 03689999998651 222 36899999976544332221 267999999999999999984
No 242
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.34 E-value=9.1e-13 Score=107.02 Aligned_cols=104 Identities=24% Similarity=0.233 Sum_probs=78.4
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
....+|||||||+|.++..+++..+..+++++|+ +.++. +++.... + ..++++++.+|+.+ ..+ +||+|+
T Consensus 183 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~--~~~~~~~--~-~~~~v~~~~~d~~~---~~p-~~D~v~ 252 (348)
T 3lst_A 183 PATGTVADVGGGRGGFLLTVLREHPGLQGVLLDR-AEVVA--RHRLDAP--D-VAGRWKVVEGDFLR---EVP-HADVHV 252 (348)
T ss_dssp CSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEEC-HHHHT--TCCCCCG--G-GTTSEEEEECCTTT---CCC-CCSEEE
T ss_pred cCCceEEEECCccCHHHHHHHHHCCCCEEEEecC-HHHhh--ccccccc--C-CCCCeEEEecCCCC---CCC-CCcEEE
Confidence 4567999999999999999998777789999999 55554 3333221 1 23579999999752 222 899999
Q ss_pred ECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 136 TDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 136 ~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
+....|..++.. ...++++++++|||||++++..
T Consensus 253 ~~~vlh~~~d~~--~~~~L~~~~~~LkpgG~l~i~e 286 (348)
T 3lst_A 253 LKRILHNWGDED--SVRILTNCRRVMPAHGRVLVID 286 (348)
T ss_dssp EESCGGGSCHHH--HHHHHHHHHHTCCTTCEEEEEE
T ss_pred EehhccCCCHHH--HHHHHHHHHHhcCCCCEEEEEE
Confidence 988776654431 1479999999999999998864
No 243
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.34 E-value=1.2e-11 Score=103.38 Aligned_cols=102 Identities=17% Similarity=0.095 Sum_probs=78.5
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHh---hcCCcee
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMS---EHQQEFD 132 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~---~~~~~~D 132 (197)
..+.+|||+|||+|.++..+++. ..+++++|+++++++.|+++.... ..++++++++|+.+.+. ...++||
T Consensus 285 ~~~~~VLDlgcG~G~~~~~la~~--~~~V~gvD~s~~al~~A~~n~~~~----~~~~v~f~~~d~~~~l~~~~~~~~~fD 358 (433)
T 1uwv_A 285 QPEDRVLDLFCGMGNFTLPLATQ--AASVVGVEGVPALVEKGQQNARLN----GLQNVTFYHENLEEDVTKQPWAKNGFD 358 (433)
T ss_dssp CTTCEEEEESCTTTTTHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHT----TCCSEEEEECCTTSCCSSSGGGTTCCS
T ss_pred CCCCEEEECCCCCCHHHHHHHhh--CCEEEEEeCCHHHHHHHHHHHHHc----CCCceEEEECCHHHHhhhhhhhcCCCC
Confidence 35579999999999999999887 379999999999999999987542 22489999999877432 2346899
Q ss_pred EEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 133 VIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 133 ~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
+|++|+|.... .+.++.+.+ ++|++.+++..
T Consensus 359 ~Vv~dPPr~g~-------~~~~~~l~~-~~p~~ivyvsc 389 (433)
T 1uwv_A 359 KVLLDPARAGA-------AGVMQQIIK-LEPIRIVYVSC 389 (433)
T ss_dssp EEEECCCTTCC-------HHHHHHHHH-HCCSEEEEEES
T ss_pred EEEECCCCccH-------HHHHHHHHh-cCCCeEEEEEC
Confidence 99999974322 345555554 78988888753
No 244
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.33 E-value=3.8e-12 Score=106.03 Aligned_cols=99 Identities=16% Similarity=0.155 Sum_probs=77.7
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
..+.+|||+|||+|.++..+++.. .+++++|+++++++.|++++... ... ++++.+|+.+.++ .+||+|+
T Consensus 289 ~~~~~VLDlgcG~G~~sl~la~~~--~~V~gvD~s~~ai~~A~~n~~~n----gl~-v~~~~~d~~~~~~---~~fD~Vv 358 (425)
T 2jjq_A 289 VEGEKILDMYSGVGTFGIYLAKRG--FNVKGFDSNEFAIEMARRNVEIN----NVD-AEFEVASDREVSV---KGFDTVI 358 (425)
T ss_dssp CCSSEEEEETCTTTHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHH----TCC-EEEEECCTTTCCC---TTCSEEE
T ss_pred CCCCEEEEeeccchHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHHc----CCc-EEEEECChHHcCc---cCCCEEE
Confidence 456799999999999999998763 69999999999999999987642 123 9999999877532 2799999
Q ss_pred ECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 136 TDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 136 ~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
+|+|.... .+.+++.+. .|+|+|.+++..
T Consensus 359 ~dPPr~g~------~~~~~~~l~-~l~p~givyvsc 387 (425)
T 2jjq_A 359 VDPPRAGL------HPRLVKRLN-REKPGVIVYVSC 387 (425)
T ss_dssp ECCCTTCS------CHHHHHHHH-HHCCSEEEEEES
T ss_pred EcCCccch------HHHHHHHHH-hcCCCcEEEEEC
Confidence 99974211 145666665 489999999864
No 245
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.31 E-value=6.2e-12 Score=102.40 Aligned_cols=106 Identities=18% Similarity=0.202 Sum_probs=85.2
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
....+|+|||||+|.++..+++..|..+++..|. |.+++.|+++.... ..++++++.+|+.+ .+...+|+|+
T Consensus 178 ~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~----~~~rv~~~~gD~~~---~~~~~~D~~~ 249 (353)
T 4a6d_A 178 SVFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQ----EEEQIDFQEGDFFK---DPLPEADLYI 249 (353)
T ss_dssp GGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC------CCSEEEEESCTTT---SCCCCCSEEE
T ss_pred ccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhc----ccCceeeecCcccc---CCCCCceEEE
Confidence 3456999999999999999999888889988887 88999999987642 24689999999753 2345689999
Q ss_pred ECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 136 TDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 136 ~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
+....|..++.. ..++++++++.|+|||.+++.-
T Consensus 250 ~~~vlh~~~d~~--~~~iL~~~~~al~pgg~lli~e 283 (353)
T 4a6d_A 250 LARVLHDWADGK--CSHLLERIYHTCKPGGGILVIE 283 (353)
T ss_dssp EESSGGGSCHHH--HHHHHHHHHHHCCTTCEEEEEE
T ss_pred eeeecccCCHHH--HHHHHHHHHhhCCCCCEEEEEE
Confidence 988777665542 1578999999999999888764
No 246
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=99.31 E-value=1.2e-11 Score=97.07 Aligned_cols=102 Identities=18% Similarity=0.243 Sum_probs=77.3
Q ss_pred CCCCCcEEEEcCeeeeeccchhhHHHHHHhhcccCCCCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHh
Q psy4592 20 RKEFGTALILDGIIQCTEFDEFSYSEMIAFLPLCSHPNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKK 99 (197)
Q Consensus 20 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~ 99 (197)
++.||.....| ......++..+.. .++ +|||||||+|.++..+++.. .+++++|+|+++++.+++
T Consensus 22 ~k~~GQnfL~d---------~~i~~~Iv~~~~~---~~~-~VLEIG~G~G~lt~~L~~~~--~~V~avEid~~~~~~l~~ 86 (271)
T 3fut_A 22 DKRFGQNFLVS---------EAHLRRIVEAARP---FTG-PVFEVGPGLGALTRALLEAG--AEVTAIEKDLRLRPVLEE 86 (271)
T ss_dssp STTSSCCEECC---------HHHHHHHHHHHCC---CCS-CEEEECCTTSHHHHHHHHTT--CCEEEEESCGGGHHHHHH
T ss_pred cccCCccccCC---------HHHHHHHHHhcCC---CCC-eEEEEeCchHHHHHHHHHcC--CEEEEEECCHHHHHHHHH
Confidence 45678877666 3333455554432 445 99999999999999999875 699999999999999999
Q ss_pred hcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEEECCCCCCC
Q psy4592 100 YLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVIITDSSDPVG 143 (197)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~~~~~~~~~ 143 (197)
+++ ..+++++++|+.++.......+|.|++|+|.+..
T Consensus 87 ~~~-------~~~v~vi~~D~l~~~~~~~~~~~~iv~NlPy~is 123 (271)
T 3fut_A 87 TLS-------GLPVRLVFQDALLYPWEEVPQGSLLVANLPYHIA 123 (271)
T ss_dssp HTT-------TSSEEEEESCGGGSCGGGSCTTEEEEEEECSSCC
T ss_pred hcC-------CCCEEEEECChhhCChhhccCccEEEecCccccc
Confidence 875 2489999999976422222368999999986655
No 247
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.29 E-value=2.7e-12 Score=105.08 Aligned_cols=99 Identities=20% Similarity=0.150 Sum_probs=78.1
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
....+|||||||+|.++..+++..+..+++++|+ |.+++.+++ .++++++.+|+.+ +.+ .. |+|+
T Consensus 202 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----------~~~v~~~~~d~~~--~~p-~~-D~v~ 266 (368)
T 3reo_A 202 EGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPA----------FSGVEHLGGDMFD--GVP-KG-DAIF 266 (368)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC----------CTTEEEEECCTTT--CCC-CC-SEEE
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhh----------cCCCEEEecCCCC--CCC-CC-CEEE
Confidence 3457999999999999999998777789999999 888776543 2579999999865 222 23 9999
Q ss_pred ECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 136 TDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 136 ~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
+....|..++.. ..+++++++++|||||++++.-
T Consensus 267 ~~~vlh~~~~~~--~~~~l~~~~~~L~pgG~l~i~e 300 (368)
T 3reo_A 267 IKWICHDWSDEH--CLKLLKNCYAALPDHGKVIVAE 300 (368)
T ss_dssp EESCGGGBCHHH--HHHHHHHHHHHSCTTCEEEEEE
T ss_pred EechhhcCCHHH--HHHHHHHHHHHcCCCCEEEEEE
Confidence 988776554432 1478999999999999998864
No 248
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.29 E-value=1.2e-11 Score=96.31 Aligned_cols=99 Identities=18% Similarity=0.362 Sum_probs=71.2
Q ss_pred CCCCcEEEEcCeeeeeccchhhHHHHHHhhcccCCCCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhh
Q psy4592 21 KEFGTALILDGIIQCTEFDEFSYSEMIAFLPLCSHPNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKY 100 (197)
Q Consensus 21 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~ 100 (197)
+.||..+..| ......++..+.. .++.+|||||||+|.++..+++.. .+++++|+|+++++.++++
T Consensus 5 k~~GQnFL~d---------~~i~~~iv~~~~~---~~~~~VLEIG~G~G~lt~~La~~~--~~V~avEid~~~~~~~~~~ 70 (255)
T 3tqs_A 5 KRFGQHFLHD---------SFVLQKIVSAIHP---QKTDTLVEIGPGRGALTDYLLTEC--DNLALVEIDRDLVAFLQKK 70 (255)
T ss_dssp ----CCEECC---------HHHHHHHHHHHCC---CTTCEEEEECCTTTTTHHHHTTTS--SEEEEEECCHHHHHHHHHH
T ss_pred CcCCcccccC---------HHHHHHHHHhcCC---CCcCEEEEEcccccHHHHHHHHhC--CEEEEEECCHHHHHHHHHH
Confidence 3466666555 3333455554432 456799999999999999999875 6999999999999999998
Q ss_pred cCCCCCCCCCCCeEEEEcchHHHHhhc---CCceeEEEECCCC
Q psy4592 101 LPGMAVGLSDPRLTVHVGDGFRFMSEH---QQEFDVIITDSSD 140 (197)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~d~~~~~~~~---~~~~D~I~~~~~~ 140 (197)
+.. .++++++++|+.++.... .++|| |++|+|.
T Consensus 71 ~~~------~~~v~~i~~D~~~~~~~~~~~~~~~~-vv~NlPY 106 (255)
T 3tqs_A 71 YNQ------QKNITIYQNDALQFDFSSVKTDKPLR-VVGNLPY 106 (255)
T ss_dssp HTT------CTTEEEEESCTTTCCGGGSCCSSCEE-EEEECCH
T ss_pred Hhh------CCCcEEEEcchHhCCHHHhccCCCeE-EEecCCc
Confidence 753 358999999998752211 35788 8888874
No 249
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.29 E-value=7.6e-12 Score=94.48 Aligned_cols=86 Identities=21% Similarity=0.235 Sum_probs=67.2
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
.++.+|||+|||+|.++..+. .+++++|+++. ++++..+|+.+ ++...++||+|+
T Consensus 66 ~~~~~vLDiG~G~G~~~~~l~-----~~v~~~D~s~~-------------------~~~~~~~d~~~-~~~~~~~fD~v~ 120 (215)
T 2zfu_A 66 PASLVVADFGCGDCRLASSIR-----NPVHCFDLASL-------------------DPRVTVCDMAQ-VPLEDESVDVAV 120 (215)
T ss_dssp CTTSCEEEETCTTCHHHHHCC-----SCEEEEESSCS-------------------STTEEESCTTS-CSCCTTCEEEEE
T ss_pred CCCCeEEEECCcCCHHHHHhh-----ccEEEEeCCCC-------------------CceEEEecccc-CCCCCCCEeEEE
Confidence 455799999999999988762 68999999987 23466777655 333456899999
Q ss_pred ECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 136 TDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 136 ~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
+....|+ .+. ..+++++.++|+|||.+++..
T Consensus 121 ~~~~l~~-~~~----~~~l~~~~~~L~~gG~l~i~~ 151 (215)
T 2zfu_A 121 FCLSLMG-TNI----RDFLEEANRVLKPGGLLKVAE 151 (215)
T ss_dssp EESCCCS-SCH----HHHHHHHHHHEEEEEEEEEEE
T ss_pred Eehhccc-cCH----HHHHHHHHHhCCCCeEEEEEE
Confidence 9887763 222 789999999999999999864
No 250
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.29 E-value=9.2e-12 Score=98.89 Aligned_cols=88 Identities=17% Similarity=0.303 Sum_probs=68.0
Q ss_pred HHHHHHhhcccCCCCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHH
Q psy4592 43 YSEMIAFLPLCSHPNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFR 122 (197)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~ 122 (197)
...++..+. ..++.+|||||||+|.++..+++.. .++++||+|+++++.+++++.. .++++++++|+.+
T Consensus 39 ~~~Iv~~l~---~~~~~~VLEIG~G~G~lT~~La~~~--~~V~aVEid~~li~~a~~~~~~------~~~v~vi~gD~l~ 107 (295)
T 3gru_A 39 VNKAVESAN---LTKDDVVLEIGLGKGILTEELAKNA--KKVYVIEIDKSLEPYANKLKEL------YNNIEIIWGDALK 107 (295)
T ss_dssp HHHHHHHTT---CCTTCEEEEECCTTSHHHHHHHHHS--SEEEEEESCGGGHHHHHHHHHH------CSSEEEEESCTTT
T ss_pred HHHHHHhcC---CCCcCEEEEECCCchHHHHHHHhcC--CEEEEEECCHHHHHHHHHHhcc------CCCeEEEECchhh
Confidence 344444443 2456799999999999999998773 6999999999999999988752 3589999999876
Q ss_pred HHhhcCCceeEEEECCCCCC
Q psy4592 123 FMSEHQQEFDVIITDSSDPV 142 (197)
Q Consensus 123 ~~~~~~~~~D~I~~~~~~~~ 142 (197)
. +....+||.|++|+|.++
T Consensus 108 ~-~~~~~~fD~Iv~NlPy~i 126 (295)
T 3gru_A 108 V-DLNKLDFNKVVANLPYQI 126 (295)
T ss_dssp S-CGGGSCCSEEEEECCGGG
T ss_pred C-CcccCCccEEEEeCcccc
Confidence 3 222357999999987544
No 251
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.29 E-value=2.1e-12 Score=105.80 Aligned_cols=98 Identities=20% Similarity=0.212 Sum_probs=78.5
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
.++.+|||||||+|.++..+++..+..+++++|+ +.+++.+++ .++++++.+|+.+ +. ..||+|+
T Consensus 208 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~----------~~~v~~~~~d~~~--~~--~~~D~v~ 272 (372)
T 1fp1_D 208 EGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPP----------LSGIEHVGGDMFA--SV--PQGDAMI 272 (372)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC----------CTTEEEEECCTTT--CC--CCEEEEE
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhh----------cCCCEEEeCCccc--CC--CCCCEEE
Confidence 4567999999999999999998777778999999 988876643 1469999999865 22 2399999
Q ss_pred ECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEE
Q psy4592 136 TDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQ 170 (197)
Q Consensus 136 ~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~ 170 (197)
+....|..++.. ...++++++++|||||++++.
T Consensus 273 ~~~~lh~~~d~~--~~~~l~~~~~~L~pgG~l~i~ 305 (372)
T 1fp1_D 273 LKAVCHNWSDEK--CIEFLSNCHKALSPNGKVIIV 305 (372)
T ss_dssp EESSGGGSCHHH--HHHHHHHHHHHEEEEEEEEEE
T ss_pred EecccccCCHHH--HHHHHHHHHHhcCCCCEEEEE
Confidence 988776655431 137999999999999999886
No 252
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.28 E-value=3.4e-12 Score=103.72 Aligned_cols=99 Identities=18% Similarity=0.141 Sum_probs=78.9
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
..+.+|||||||+|.++..+++..+..+++++|+ |.+++.+++. ++++++.+|+.+ +. ..||+|+
T Consensus 187 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~----------~~v~~~~~d~~~--~~--p~~D~v~ 251 (352)
T 1fp2_A 187 DGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSGS----------NNLTYVGGDMFT--SI--PNADAVL 251 (352)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCB----------TTEEEEECCTTT--CC--CCCSEEE
T ss_pred ccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcccC----------CCcEEEeccccC--CC--CCccEEE
Confidence 3557999999999999999998767689999999 9998876541 359999999754 22 2499999
Q ss_pred ECCCCCCCCCcccccHHHHHHHHhhcCC---CcEEEEEc
Q psy4592 136 TDSSDPVGPAESLFQASYFELMSRALRP---GGIVCSQA 171 (197)
Q Consensus 136 ~~~~~~~~~~~~l~~~~~~~~~~~~Lkp---gG~l~~~~ 171 (197)
+....|..++.. ...++++++++||| ||++++..
T Consensus 252 ~~~~lh~~~d~~--~~~~l~~~~~~L~p~~~gG~l~i~e 288 (352)
T 1fp2_A 252 LKYILHNWTDKD--CLRILKKCKEAVTNDGKRGKVTIID 288 (352)
T ss_dssp EESCGGGSCHHH--HHHHHHHHHHHHSGGGCCCEEEEEE
T ss_pred eehhhccCCHHH--HHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 988776655431 13899999999999 99988864
No 253
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.28 E-value=4e-12 Score=103.93 Aligned_cols=99 Identities=20% Similarity=0.174 Sum_probs=78.3
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
....+|||||||+|.++..+++..+..+++++|+ |.+++.+++ .++++++.+|+.+ +.+ .. |+|+
T Consensus 200 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----------~~~v~~~~~D~~~--~~p-~~-D~v~ 264 (364)
T 3p9c_A 200 EGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQ----------FPGVTHVGGDMFK--EVP-SG-DTIL 264 (364)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC----------CTTEEEEECCTTT--CCC-CC-SEEE
T ss_pred cCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhh----------cCCeEEEeCCcCC--CCC-CC-CEEE
Confidence 3457999999999999999998777789999999 888776543 2579999999865 222 23 9999
Q ss_pred ECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 136 TDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 136 ~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
+....|..++.. ...++++++++|||||++++.-
T Consensus 265 ~~~vlh~~~d~~--~~~~L~~~~~~L~pgG~l~i~e 298 (364)
T 3p9c_A 265 MKWILHDWSDQH--CATLLKNCYDALPAHGKVVLVQ 298 (364)
T ss_dssp EESCGGGSCHHH--HHHHHHHHHHHSCTTCEEEEEE
T ss_pred ehHHhccCCHHH--HHHHHHHHHHHcCCCCEEEEEE
Confidence 988776554432 1578999999999999998864
No 254
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.27 E-value=5e-12 Score=100.73 Aligned_cols=102 Identities=22% Similarity=0.217 Sum_probs=66.5
Q ss_pred CCCCCcEEEEcCeeeeeccchhhHHHHHHhhcccCCCCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHh
Q psy4592 20 RKEFGTALILDGIIQCTEFDEFSYSEMIAFLPLCSHPNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKK 99 (197)
Q Consensus 20 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~ 99 (197)
.+.||..+..+ ......++..+. ..++.+|||+|||+|.++..+++.. .+++++|+++.+++.+++
T Consensus 17 ~k~~Gq~fl~~---------~~i~~~i~~~~~---~~~~~~VLDiG~G~G~lt~~La~~~--~~v~~vDi~~~~~~~a~~ 82 (299)
T 2h1r_A 17 LYFQGQHLLKN---------PGILDKIIYAAK---IKSSDIVLEIGCGTGNLTVKLLPLA--KKVITIDIDSRMISEVKK 82 (299)
T ss_dssp ------CEECC---------HHHHHHHHHHHC---CCTTCEEEEECCTTSTTHHHHTTTS--SEEEEECSCHHHHHHHHH
T ss_pred hhccccceecC---------HHHHHHHHHhcC---CCCcCEEEEEcCcCcHHHHHHHhcC--CEEEEEECCHHHHHHHHH
Confidence 45566665433 223344444433 2456799999999999999998763 699999999999999998
Q ss_pred hcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEEECCCCCC
Q psy4592 100 YLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVIITDSSDPV 142 (197)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~~~~~~~~ 142 (197)
++... ..++++++++|+.+. ..++||+|++|+|.++
T Consensus 83 ~~~~~----~~~~v~~~~~D~~~~---~~~~~D~Vv~n~py~~ 118 (299)
T 2h1r_A 83 RCLYE----GYNNLEVYEGDAIKT---VFPKFDVCTANIPYKI 118 (299)
T ss_dssp HHHHT----TCCCEEC----CCSS---CCCCCSEEEEECCGGG
T ss_pred HHHHc----CCCceEEEECchhhC---CcccCCEEEEcCCccc
Confidence 86431 225799999998653 2358999999987554
No 255
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.27 E-value=5.1e-12 Score=100.04 Aligned_cols=128 Identities=15% Similarity=0.246 Sum_probs=80.6
Q ss_pred hHHHHHHhhc--ccCCCCCCeEEEEeC------CchHhHHHHhc-CCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCC
Q psy4592 42 SYSEMIAFLP--LCSHPNPKKVLIVGG------GDGGVAREVLK-HPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPR 112 (197)
Q Consensus 42 ~~~~~~~~~~--~~~~~~~~~vLdiG~------G~G~~~~~l~~-~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~ 112 (197)
.|.++...+. ....+++.+|||+|| |+|. ..+++ ..+..+++++|+++. . ++
T Consensus 46 ~y~~l~~~l~~~~l~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~--------v---------~~ 106 (290)
T 2xyq_A 46 KYTQLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF--------V---------SD 106 (290)
T ss_dssp HHHHHHHHHTTSCCCCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC--------B---------CS
T ss_pred HHHHHHHHHHHhhcCCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC--------C---------CC
Confidence 3555554441 222356679999999 4476 32333 333479999999997 1 14
Q ss_pred eEE-EEcchHHHHhhcCCceeEEEECCCCCCC----CC----cccccHHHHHHHHhhcCCCcEEEEEcCCCCcChhHHHH
Q psy4592 113 LTV-HVGDGFRFMSEHQQEFDVIITDSSDPVG----PA----ESLFQASYFELMSRALRPGGIVCSQAGTLWYSLDCVGN 183 (197)
Q Consensus 113 ~~~-~~~d~~~~~~~~~~~~D~I~~~~~~~~~----~~----~~l~~~~~~~~~~~~LkpgG~l~~~~~~~~~~~~~~~~ 183 (197)
+++ +++|+.+. +. .++||+|++|++.+.. .+ ..+ .+..++.+.++|||||.|++....... .+.
T Consensus 107 v~~~i~gD~~~~-~~-~~~fD~Vvsn~~~~~~g~~~~d~~~~~~l-~~~~l~~a~r~LkpGG~~v~~~~~~~~----~~~ 179 (290)
T 2xyq_A 107 ADSTLIGDCATV-HT-ANKWDLIISDMYDPRTKHVTKENDSKEGF-FTYLCGFIKQKLALGGSIAVKITEHSW----NAD 179 (290)
T ss_dssp SSEEEESCGGGC-CC-SSCEEEEEECCCCCC---CCSCCCCCCTH-HHHHHHHHHHHEEEEEEEEEEECSSSC----CHH
T ss_pred CEEEEECccccC-Cc-cCcccEEEEcCCccccccccccccchHHH-HHHHHHHHHHhcCCCcEEEEEEeccCC----HHH
Confidence 678 99998753 21 3689999999753321 01 111 157899999999999999986533211 235
Q ss_pred HHHHHHhh-CCcc
Q psy4592 184 TLQHCASV-FPRL 195 (197)
Q Consensus 184 ~~~~~~~~-f~~v 195 (197)
+.+.+++. |..|
T Consensus 180 l~~~l~~~GF~~v 192 (290)
T 2xyq_A 180 LYKLMGHFSWWTA 192 (290)
T ss_dssp HHHHHTTEEEEEE
T ss_pred HHHHHHHcCCcEE
Confidence 55566655 6544
No 256
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.26 E-value=1.2e-11 Score=101.75 Aligned_cols=114 Identities=13% Similarity=0.078 Sum_probs=82.1
Q ss_pred CCCCCeEEEEeCCchHhHHHHhcCCC--------------------------------------CccEEEEEcCHHHHHH
Q psy4592 55 HPNPKKVLIVGGGDGGVAREVLKHPS--------------------------------------VESAYLVEIDNRVIEV 96 (197)
Q Consensus 55 ~~~~~~vLdiG~G~G~~~~~l~~~~~--------------------------------------~~~v~~ve~~~~~~~~ 96 (197)
......+||.+||+|.++.+++.... ..+++++|+|+.+++.
T Consensus 192 ~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~ 271 (384)
T 3ldg_A 192 WFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEI 271 (384)
T ss_dssp CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHH
T ss_pred CCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHH
Confidence 45567999999999999888764321 1469999999999999
Q ss_pred HHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEEECCCCCCCCCcccccHHHHHHHHhhcCC--CcEEEEEcCC
Q psy4592 97 SKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVIITDSSDPVGPAESLFQASYFELMSRALRP--GGIVCSQAGT 173 (197)
Q Consensus 97 a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~~~~~~~~~~~~~l~~~~~~~~~~~~Lkp--gG~l~~~~~~ 173 (197)
|++|.... ++ ..++++.++|+.+... .++||+|++|||........-....+++.+.+.||+ ||.+++.+..
T Consensus 272 Ar~Na~~~--gl-~~~I~~~~~D~~~l~~--~~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~~ 345 (384)
T 3ldg_A 272 ARKNAREV--GL-EDVVKLKQMRLQDFKT--NKINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWSQFILTND 345 (384)
T ss_dssp HHHHHHHT--TC-TTTEEEEECCGGGCCC--CCCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSEEEEEESC
T ss_pred HHHHHHHc--CC-CCceEEEECChHHCCc--cCCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcEEEEEECC
Confidence 99987642 22 2469999999877432 358999999999754322111115577777777776 8888776544
No 257
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.26 E-value=3.6e-12 Score=109.94 Aligned_cols=108 Identities=15% Similarity=0.047 Sum_probs=80.8
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhh-cCCceeEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSE-HQQEFDVI 134 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~~~D~I 134 (197)
..+.+|||||||+|.++..|++.+ .+|+|||+++.+++.|+...... ...++++.++++++.... ..++||+|
T Consensus 65 ~~~~~vLDvGCG~G~~~~~la~~g--a~V~giD~~~~~i~~a~~~a~~~----~~~~~~~~~~~~~~~~~~~~~~~fD~v 138 (569)
T 4azs_A 65 GRPLNVLDLGCAQGFFSLSLASKG--ATIVGIDFQQENINVCRALAEEN----PDFAAEFRVGRIEEVIAALEEGEFDLA 138 (569)
T ss_dssp TSCCEEEEETCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHTS----TTSEEEEEECCHHHHHHHCCTTSCSEE
T ss_pred CCCCeEEEECCCCcHHHHHHHhCC--CEEEEECCCHHHHHHHHHHHHhc----CCCceEEEECCHHHHhhhccCCCccEE
Confidence 356799999999999999999875 79999999999999999876542 124799999999887554 35789999
Q ss_pred EECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 135 ITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 135 ~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
++....++.+++.. -..+..+.+.|+++|..++..
T Consensus 139 ~~~e~~ehv~~~~~--~~~~~~~~~tl~~~~~~~~~~ 173 (569)
T 4azs_A 139 IGLSVFHHIVHLHG--IDEVKRLLSRLADVTQAVILE 173 (569)
T ss_dssp EEESCHHHHHHHHC--HHHHHHHHHHHHHHSSEEEEE
T ss_pred EECcchhcCCCHHH--HHHHHHHHHHhccccceeeEE
Confidence 99877655433321 123345667788888655543
No 258
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.24 E-value=9e-12 Score=91.31 Aligned_cols=88 Identities=18% Similarity=0.215 Sum_probs=71.3
Q ss_pred CCCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhh--cCCcee
Q psy4592 55 HPNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSE--HQQEFD 132 (197)
Q Consensus 55 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~--~~~~~D 132 (197)
.+++.+|||+|||. + .+|+++.|++.|+++.. .++++.++|+.+.... ..++||
T Consensus 10 ~~~g~~vL~~~~g~---------------v-~vD~s~~ml~~a~~~~~--------~~~~~~~~d~~~~~~~~~~~~~fD 65 (176)
T 2ld4_A 10 ISAGQFVAVVWDKS---------------S-PVEALKGLVDKLQALTG--------NEGRVSVENIKQLLQSAHKESSFD 65 (176)
T ss_dssp CCTTSEEEEEECTT---------------S-CHHHHHHHHHHHHHHTT--------TTSEEEEEEGGGGGGGCCCSSCEE
T ss_pred CCCCCEEEEecCCc---------------e-eeeCCHHHHHHHHHhcc--------cCcEEEEechhcCccccCCCCCEe
Confidence 46678999999986 1 38999999999999864 2489999998874321 467899
Q ss_pred EEEECCCCCCC-CCcccccHHHHHHHHhhcCCCcEEEEE
Q psy4592 133 VIITDSSDPVG-PAESLFQASYFELMSRALRPGGIVCSQ 170 (197)
Q Consensus 133 ~I~~~~~~~~~-~~~~l~~~~~~~~~~~~LkpgG~l~~~ 170 (197)
+|++....++. ++. ..++++++++|||||++++.
T Consensus 66 ~V~~~~~l~~~~~~~----~~~l~~~~r~LkpgG~l~~~ 100 (176)
T 2ld4_A 66 IILSGLVPGSTTLHS----AEILAEIARILRPGGCLFLK 100 (176)
T ss_dssp EEEECCSTTCCCCCC----HHHHHHHHHHEEEEEEEEEE
T ss_pred EEEECChhhhcccCH----HHHHHHHHHHCCCCEEEEEE
Confidence 99998877766 443 78999999999999999985
No 259
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.24 E-value=2.5e-12 Score=99.49 Aligned_cols=105 Identities=16% Similarity=0.156 Sum_probs=82.4
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
+.+.+|||||||+|-++..+....+..+++++|+|+.+++.+++++.. .+.+..+...|.... ...++||+++
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~-----~g~~~~~~v~D~~~~--~p~~~~DvaL 203 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTR-----LNVPHRTNVADLLED--RLDEPADVTL 203 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHH-----TTCCEEEEECCTTTS--CCCSCCSEEE
T ss_pred CCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHh-----cCCCceEEEeeeccc--CCCCCcchHH
Confidence 457899999999999998888777779999999999999999999865 235688999996432 2357899999
Q ss_pred ECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEE
Q psy4592 136 TDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQ 170 (197)
Q Consensus 136 ~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~ 170 (197)
+.-..|...+.+ ....+ .+.+.|+++|+++-.
T Consensus 204 ~lkti~~Le~q~--kg~g~-~ll~aL~~~~vvVSf 235 (281)
T 3lcv_B 204 LLKTLPCLETQQ--RGSGW-EVIDIVNSPNIVVTF 235 (281)
T ss_dssp ETTCHHHHHHHS--TTHHH-HHHHHSSCSEEEEEE
T ss_pred HHHHHHHhhhhh--hHHHH-HHHHHhCCCCEEEec
Confidence 988655532211 12455 899999999998854
No 260
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.24 E-value=7.1e-12 Score=103.40 Aligned_cols=114 Identities=15% Similarity=0.102 Sum_probs=79.8
Q ss_pred CCCCCeEEEEeCCchHhHHHHhcCCC--------------------------------------CccEEEEEcCHHHHHH
Q psy4592 55 HPNPKKVLIVGGGDGGVAREVLKHPS--------------------------------------VESAYLVEIDNRVIEV 96 (197)
Q Consensus 55 ~~~~~~vLdiG~G~G~~~~~l~~~~~--------------------------------------~~~v~~ve~~~~~~~~ 96 (197)
...+..|||.+||+|.++.+++.... ..+++++|+|+.+++.
T Consensus 199 ~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~ 278 (393)
T 3k0b_A 199 WHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEI 278 (393)
T ss_dssp CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHH
T ss_pred CCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHH
Confidence 45567999999999999888765321 1469999999999999
Q ss_pred HHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEEECCCCCCCCCcccccHHHHHHHHhhcCC--CcEEEEEcCC
Q psy4592 97 SKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVIITDSSDPVGPAESLFQASYFELMSRALRP--GGIVCSQAGT 173 (197)
Q Consensus 97 a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~~~~~~~~~~~~~l~~~~~~~~~~~~Lkp--gG~l~~~~~~ 173 (197)
|++++... ++ ..++++.++|+.+... .++||+|++|||........-....+++.+.+.||+ ||.+++.+..
T Consensus 279 Ar~Na~~~--gl-~~~I~~~~~D~~~~~~--~~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~~ 352 (393)
T 3k0b_A 279 AKQNAVEA--GL-GDLITFRQLQVADFQT--EDEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTWSVYVLTSY 352 (393)
T ss_dssp HHHHHHHT--TC-TTCSEEEECCGGGCCC--CCCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTTCEEEEEECC
T ss_pred HHHHHHHc--CC-CCceEEEECChHhCCC--CCCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 99987642 22 2369999999877432 358999999998644311100013456666666655 8887776544
No 261
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.24 E-value=5.7e-12 Score=103.75 Aligned_cols=114 Identities=18% Similarity=0.184 Sum_probs=80.7
Q ss_pred CCCCCeEEEEeCCchHhHHHHhcCCC--------------------------------------CccEEEEEcCHHHHHH
Q psy4592 55 HPNPKKVLIVGGGDGGVAREVLKHPS--------------------------------------VESAYLVEIDNRVIEV 96 (197)
Q Consensus 55 ~~~~~~vLdiG~G~G~~~~~l~~~~~--------------------------------------~~~v~~ve~~~~~~~~ 96 (197)
.....+|||++||+|.++.+++.... ..+++++|+|+.+++.
T Consensus 193 ~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~ 272 (385)
T 3ldu_A 193 WKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDI 272 (385)
T ss_dssp CCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHH
T ss_pred CCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHH
Confidence 34567999999999999988765321 1479999999999999
Q ss_pred HHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEEECCCCCCCCCcccccHHHHHHHHhhcCC--CcEEEEEcCC
Q psy4592 97 SKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVIITDSSDPVGPAESLFQASYFELMSRALRP--GGIVCSQAGT 173 (197)
Q Consensus 97 a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~~~~~~~~~~~~~l~~~~~~~~~~~~Lkp--gG~l~~~~~~ 173 (197)
|++++... ++ ..++++.++|+.+... .++||+|++|||........-....+++.+.+.||+ ||.+++.+..
T Consensus 273 Ar~Na~~~--gl-~~~i~~~~~D~~~l~~--~~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~~ 346 (385)
T 3ldu_A 273 ARENAEIA--GV-DEYIEFNVGDATQFKS--EDEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWSYYLITSY 346 (385)
T ss_dssp HHHHHHHH--TC-GGGEEEEECCGGGCCC--SCBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCEEEEEESC
T ss_pred HHHHHHHc--CC-CCceEEEECChhhcCc--CCCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCEEEEEECC
Confidence 99987642 11 2379999999877432 368999999998643211100114566777667766 8877776544
No 262
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=99.22 E-value=2.4e-13 Score=105.33 Aligned_cols=116 Identities=18% Similarity=0.242 Sum_probs=81.8
Q ss_pred HHHHHHhhcccCCCCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHH
Q psy4592 43 YSEMIAFLPLCSHPNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFR 122 (197)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~ 122 (197)
...++..+. ..++.+|||+|||+|.++..+++.. .+++++|+|+.+++.++++... .++++++++|+.+
T Consensus 18 ~~~i~~~~~---~~~~~~VLDiG~G~G~~~~~l~~~~--~~v~~id~~~~~~~~a~~~~~~------~~~v~~~~~D~~~ 86 (245)
T 1yub_A 18 LNQIIKQLN---LKETDTVYEIGTGKGHLTTKLAKIS--KQVTSIELDSHLFNLSSEKLKL------NTRVTLIHQDILQ 86 (245)
T ss_dssp HHHHHHHCC---CCSSEEEEECSCCCSSCSHHHHHHS--SEEEESSSSCSSSSSSSCTTTT------CSEEEECCSCCTT
T ss_pred HHHHHHhcC---CCCCCEEEEEeCCCCHHHHHHHHhC--CeEEEEECCHHHHHHHHHHhcc------CCceEEEECChhh
Confidence 344444443 2456799999999999999988774 7999999999999998887642 3589999999876
Q ss_pred HHhhc-CCceeEEEECCCCCCCCCc-------ccccHHHH----HHHHhhcCCCcEEEEEc
Q psy4592 123 FMSEH-QQEFDVIITDSSDPVGPAE-------SLFQASYF----ELMSRALRPGGIVCSQA 171 (197)
Q Consensus 123 ~~~~~-~~~~D~I~~~~~~~~~~~~-------~l~~~~~~----~~~~~~LkpgG~l~~~~ 171 (197)
. +.. .++| .|++|+|....... .......+ +.+.++|+|||.+.+..
T Consensus 87 ~-~~~~~~~f-~vv~n~Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~ 145 (245)
T 1yub_A 87 F-QFPNKQRY-KIVGNIPYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLL 145 (245)
T ss_dssp T-TCCCSSEE-EEEEECCSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHT
T ss_pred c-CcccCCCc-EEEEeCCccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhh
Confidence 4 222 2578 88899886543110 00012233 66899999999877653
No 263
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.20 E-value=5.5e-11 Score=92.03 Aligned_cols=77 Identities=17% Similarity=0.281 Sum_probs=60.7
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
.++.+|||+|||+|.++..+++.. .+++++|+|+.+++.+++++.. .++++++++|+.+........| .|+
T Consensus 29 ~~~~~VLDiG~G~G~lt~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~------~~~v~~~~~D~~~~~~~~~~~~-~vv 99 (244)
T 1qam_A 29 NEHDNIFEIGSGKGHFTLELVQRC--NFVTAIEIDHKLCKTTENKLVD------HDNFQVLNKDILQFKFPKNQSY-KIF 99 (244)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHS--SEEEEECSCHHHHHHHHHHTTT------CCSEEEECCCGGGCCCCSSCCC-EEE
T ss_pred CCCCEEEEEeCCchHHHHHHHHcC--CeEEEEECCHHHHHHHHHhhcc------CCCeEEEEChHHhCCcccCCCe-EEE
Confidence 456799999999999999998775 6999999999999999998753 2589999999876421112345 688
Q ss_pred ECCCCC
Q psy4592 136 TDSSDP 141 (197)
Q Consensus 136 ~~~~~~ 141 (197)
+|+|.+
T Consensus 100 ~nlPy~ 105 (244)
T 1qam_A 100 GNIPYN 105 (244)
T ss_dssp EECCGG
T ss_pred EeCCcc
Confidence 888754
No 264
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=99.19 E-value=8.7e-11 Score=88.10 Aligned_cols=100 Identities=14% Similarity=0.052 Sum_probs=75.2
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCC-CCCeEEEEcchHHH-----------
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLS-DPRLTVHVGDGFRF----------- 123 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~-~~~~~~~~~d~~~~----------- 123 (197)
.++++|||+|| |+.+..+++.. ..++++||.+++..+.|++++... ++. ..+++++.+|+.+.
T Consensus 29 ~~a~~VLEiGt--GySTl~lA~~~-~g~VvtvE~d~~~~~~ar~~l~~~--g~~~~~~I~~~~gda~~~~~wg~p~~~~~ 103 (202)
T 3cvo_A 29 EEAEVILEYGS--GGSTVVAAELP-GKHVTSVESDRAWARMMKAWLAAN--PPAEGTEVNIVWTDIGPTGDWGHPVSDAK 103 (202)
T ss_dssp HHCSEEEEESC--SHHHHHHHTST-TCEEEEEESCHHHHHHHHHHHHHS--CCCTTCEEEEEECCCSSBCGGGCBSSSTT
T ss_pred hCCCEEEEECc--hHHHHHHHHcC-CCEEEEEeCCHHHHHHHHHHHHHc--CCCCCCceEEEEeCchhhhcccccccchh
Confidence 35679999998 46777777743 579999999999999999988752 220 35899999996432
Q ss_pred -------Hh----h-cCCceeEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEE
Q psy4592 124 -------MS----E-HQQEFDVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCS 169 (197)
Q Consensus 124 -------~~----~-~~~~~D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~ 169 (197)
.. . ..++||+|++|... . ..++..+.+.|+|||++++
T Consensus 104 ~~~l~~~~~~i~~~~~~~~fDlIfIDg~k-----~----~~~~~~~l~~l~~GG~Iv~ 152 (202)
T 3cvo_A 104 WRSYPDYPLAVWRTEGFRHPDVVLVDGRF-----R----VGCALATAFSITRPVTLLF 152 (202)
T ss_dssp GGGTTHHHHGGGGCTTCCCCSEEEECSSS-----H----HHHHHHHHHHCSSCEEEEE
T ss_pred hhhHHHHhhhhhccccCCCCCEEEEeCCC-----c----hhHHHHHHHhcCCCeEEEE
Confidence 11 1 13689999999831 1 3577778899999999987
No 265
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.19 E-value=1.1e-11 Score=104.00 Aligned_cols=114 Identities=18% Similarity=0.156 Sum_probs=81.7
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCC-------------CCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHH
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHP-------------SVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFR 122 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~-------------~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~ 122 (197)
..+.+|||.|||+|+++..+.+.. ...+++|+|+++.+++.|+.++... +....+.++.++|+..
T Consensus 170 ~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~--g~~~~~~~i~~gD~l~ 247 (445)
T 2okc_A 170 QMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLH--GIGTDRSPIVCEDSLE 247 (445)
T ss_dssp CTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHT--TCCSSCCSEEECCTTT
T ss_pred CCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHh--CCCcCCCCEeeCCCCC
Confidence 345699999999999988877532 2368999999999999999876431 1121257889999754
Q ss_pred HHhhcCCceeEEEECCCCCCCCCcc-------c------ccHHHHHHHHhhcCCCcEEEEEcCC
Q psy4592 123 FMSEHQQEFDVIITDSSDPVGPAES-------L------FQASYFELMSRALRPGGIVCSQAGT 173 (197)
Q Consensus 123 ~~~~~~~~~D~I~~~~~~~~~~~~~-------l------~~~~~~~~~~~~LkpgG~l~~~~~~ 173 (197)
.. ..++||+|++|||........ + ....|++.+.+.|||||++++.+..
T Consensus 248 ~~--~~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p~ 309 (445)
T 2okc_A 248 KE--PSTLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLPD 309 (445)
T ss_dssp SC--CSSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEH
T ss_pred Cc--ccCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEECC
Confidence 22 234899999999875431110 0 0136899999999999999887643
No 266
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=99.18 E-value=1.8e-10 Score=93.70 Aligned_cols=134 Identities=16% Similarity=0.146 Sum_probs=98.1
Q ss_pred CCCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCC--CCCCCCeEEEEcchHHHHhhcCCcee
Q psy4592 55 HPNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAV--GLSDPRLTVHVGDGFRFMSEHQQEFD 132 (197)
Q Consensus 55 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~--~~~~~~~~~~~~d~~~~~~~~~~~~D 132 (197)
..++.+|||+|+|.|+=+.+++.......++++|+++.-++..++++...+. .....++.+...|+..+.....++||
T Consensus 146 ~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~~~fD 225 (359)
T 4fzv_A 146 LQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTYD 225 (359)
T ss_dssp CCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHSTTCEE
T ss_pred CCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhccccCC
Confidence 3566899999999999999988776656899999999988888877543210 01235799999999887655567999
Q ss_pred EEEECCCCCCC------CCccc--------------ccHHHHHHHHhhcCCCcEEEEEcCCCCc--ChhHHHHHHHHH
Q psy4592 133 VIITDSSDPVG------PAESL--------------FQASYFELMSRALRPGGIVCSQAGTLWY--SLDCVGNTLQHC 188 (197)
Q Consensus 133 ~I~~~~~~~~~------~~~~l--------------~~~~~~~~~~~~LkpgG~l~~~~~~~~~--~~~~~~~~~~~~ 188 (197)
.|++|+|.... .++.. ...++++.+.+.|||||+++..+++... +....+.+++..
T Consensus 226 ~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~~~ENE~vV~~~L~~~ 303 (359)
T 4fzv_A 226 RVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSHLQNEYVVQGAIELL 303 (359)
T ss_dssp EEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCCCTTTTHHHHHHHHHHH
T ss_pred EEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCCchhhCHHHHHHHHHhC
Confidence 99999986431 11111 1246888999999999999999988544 445555555443
No 267
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.17 E-value=2.5e-11 Score=98.82 Aligned_cols=98 Identities=18% Similarity=0.174 Sum_probs=77.8
Q ss_pred CCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEEE
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVIIT 136 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~~ 136 (197)
...+|||||||+|.++..+++..+..+++++|+ +.+++.+++ .++++++.+|+.+ +. .+||+|++
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----------~~~v~~~~~d~~~--~~--~~~D~v~~ 257 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTG----------NENLNFVGGDMFK--SI--PSADAVLL 257 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCC----------CSSEEEEECCTTT--CC--CCCSEEEE
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhccc----------CCCcEEEeCccCC--CC--CCceEEEE
Confidence 457999999999999999998777779999999 788765543 1359999999865 22 35999999
Q ss_pred CCCCCCCCCcccccHHHHHHHHhhcCC---CcEEEEEc
Q psy4592 137 DSSDPVGPAESLFQASYFELMSRALRP---GGIVCSQA 171 (197)
Q Consensus 137 ~~~~~~~~~~~l~~~~~~~~~~~~Lkp---gG~l~~~~ 171 (197)
....|..++.. ...++++++++|+| ||++++..
T Consensus 258 ~~vlh~~~d~~--~~~~l~~~~~~L~p~~~gG~l~i~e 293 (358)
T 1zg3_A 258 KWVLHDWNDEQ--SLKILKNSKEAISHKGKDGKVIIID 293 (358)
T ss_dssp ESCGGGSCHHH--HHHHHHHHHHHTGGGGGGCEEEEEE
T ss_pred cccccCCCHHH--HHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 88877665431 14899999999999 99888853
No 268
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.16 E-value=2.3e-11 Score=93.17 Aligned_cols=102 Identities=17% Similarity=0.131 Sum_probs=77.4
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
..+.+|||||||+|-++..+. +..+++++|||+.+++.+++++.. .+.+..+..+|..... ..++||+|+
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~---~~~~y~a~DId~~~i~~ar~~~~~-----~g~~~~~~v~D~~~~~--~~~~~DvvL 173 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER---GIASVWGCDIHQGLGDVITPFARE-----KDWDFTFALQDVLCAP--PAEAGDLAL 173 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT---TCSEEEEEESBHHHHHHHHHHHHH-----TTCEEEEEECCTTTSC--CCCBCSEEE
T ss_pred CCCCeEEEecCCccHHHHHhc---cCCeEEEEeCCHHHHHHHHHHHHh-----cCCCceEEEeecccCC--CCCCcchHH
Confidence 467899999999999988776 558999999999999999998754 3468899999975432 356999999
Q ss_pred ECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEE
Q psy4592 136 TDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQ 170 (197)
Q Consensus 136 ~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~ 170 (197)
+.-..|...+.. ....+ .+.+.|+++|+++-.
T Consensus 174 llk~lh~LE~q~--~~~~~-~ll~aL~~~~vvVsf 205 (253)
T 3frh_A 174 IFKLLPLLEREQ--AGSAM-ALLQSLNTPRMAVSF 205 (253)
T ss_dssp EESCHHHHHHHS--TTHHH-HHHHHCBCSEEEEEE
T ss_pred HHHHHHHhhhhc--hhhHH-HHHHHhcCCCEEEEc
Confidence 886554432111 12344 788899999887753
No 269
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=99.15 E-value=7e-11 Score=91.85 Aligned_cols=146 Identities=11% Similarity=0.036 Sum_probs=91.7
Q ss_pred chhhHHHHHHhhcccCCCCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEc
Q psy4592 39 DEFSYSEMIAFLPLCSHPNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVG 118 (197)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 118 (197)
..+-..++... .. .++..+|||||||+|+++..+++..+...++++++.-++. ..+...... ..++..+.+
T Consensus 59 aA~KL~ei~ek-~~--l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~-----~~pi~~~~~-g~~ii~~~~ 129 (277)
T 3evf_A 59 GTAKLRWFHER-GY--VKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGH-----EKPMNVQSL-GWNIITFKD 129 (277)
T ss_dssp HHHHHHHHHHT-TS--SCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTC-----CCCCCCCBT-TGGGEEEEC
T ss_pred HHHHHHHHHHh-CC--CCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCc-----ccccccCcC-CCCeEEEec
Confidence 33444555555 22 2455699999999999999888765656888888875431 001100000 114444555
Q ss_pred chHHHHhhcCCceeEEEECCCCCCCCCcccc---cHHHHHHHHhhcCCC-cEEEEEcCCCCcChhHHHHHHHHHHhhCCc
Q psy4592 119 DGFRFMSEHQQEFDVIITDSSDPVGPAESLF---QASYFELMSRALRPG-GIVCSQAGTLWYSLDCVGNTLQHCASVFPR 194 (197)
Q Consensus 119 d~~~~~~~~~~~~D~I~~~~~~~~~~~~~l~---~~~~~~~~~~~Lkpg-G~l~~~~~~~~~~~~~~~~~~~~~~~~f~~ 194 (197)
++. ......++||+|++|...+ ....... +-.+++.+.+.|+|| |.|++-+..|. .+....+++.+++.|..
T Consensus 130 ~~d-v~~l~~~~~DlVlsD~apn-sG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~py--g~~~~~l~~~lk~~F~~ 205 (277)
T 3evf_A 130 KTD-IHRLEPVKCDTLLCDIGES-SSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLAPY--MPDVLEKLELLQRRFGG 205 (277)
T ss_dssp SCC-TTTSCCCCCSEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCTT--SHHHHHHHHHHHHHHCC
T ss_pred cce-ehhcCCCCccEEEecCccC-cCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecCCC--CccHHHHHHHHHHhcCC
Confidence 532 1223457899999998655 3222111 123568889999999 99999654432 46778888999999988
Q ss_pred ccC
Q psy4592 195 LHC 197 (197)
Q Consensus 195 v~~ 197 (197)
|++
T Consensus 206 V~~ 208 (277)
T 3evf_A 206 TVI 208 (277)
T ss_dssp EEE
T ss_pred EEE
Confidence 763
No 270
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=99.15 E-value=1.3e-10 Score=92.60 Aligned_cols=89 Identities=21% Similarity=0.274 Sum_probs=69.7
Q ss_pred HHHHHHhhcccCCCCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHH
Q psy4592 43 YSEMIAFLPLCSHPNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFR 122 (197)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~ 122 (197)
+.+++..+.. .++.+|||+|||+|+.+..+++..+..+++++|+|+.+++.|++++... ..+++++++|+.+
T Consensus 15 l~e~l~~L~~---~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~-----g~~v~~v~~d~~~ 86 (301)
T 1m6y_A 15 VREVIEFLKP---EDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEF-----SDRVSLFKVSYRE 86 (301)
T ss_dssp HHHHHHHHCC---CTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGG-----TTTEEEEECCGGG
T ss_pred HHHHHHhcCC---CCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhc-----CCcEEEEECCHHH
Confidence 4555555532 4567999999999999999998765579999999999999999988652 2589999999877
Q ss_pred HHh---hc-CCceeEEEECCC
Q psy4592 123 FMS---EH-QQEFDVIITDSS 139 (197)
Q Consensus 123 ~~~---~~-~~~~D~I~~~~~ 139 (197)
... .. ..+||.|++|++
T Consensus 87 l~~~l~~~g~~~~D~Vl~D~g 107 (301)
T 1m6y_A 87 ADFLLKTLGIEKVDGILMDLG 107 (301)
T ss_dssp HHHHHHHTTCSCEEEEEEECS
T ss_pred HHHHHHhcCCCCCCEEEEcCc
Confidence 532 11 158999999985
No 271
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=99.15 E-value=4.4e-11 Score=102.45 Aligned_cols=117 Identities=12% Similarity=0.065 Sum_probs=82.9
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCC----C--------------CccEEEEEcCHHHHHHHHhhcCCCCCCCCC---CCeE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHP----S--------------VESAYLVEIDNRVIEVSKKYLPGMAVGLSD---PRLT 114 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~----~--------------~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~---~~~~ 114 (197)
..+.+|||.|||+|++...+.+.. + ...++|+|+++.++++|+.++... +... .+.+
T Consensus 168 ~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~--gi~~~~~~~~~ 245 (541)
T 2ar0_A 168 QPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLH--DIEGNLDHGGA 245 (541)
T ss_dssp CTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTT--TCCCBGGGTBS
T ss_pred CCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHh--CCCccccccCC
Confidence 345699999999999887766431 1 247999999999999999875431 1111 1278
Q ss_pred EEEcchHHHHhhcCCceeEEEECCCCCCCCCc----------ccccHHHHHHHHhhcCCCcEEEEEcCCC
Q psy4592 115 VHVGDGFRFMSEHQQEFDVIITDSSDPVGPAE----------SLFQASYFELMSRALRPGGIVCSQAGTL 174 (197)
Q Consensus 115 ~~~~d~~~~~~~~~~~~D~I~~~~~~~~~~~~----------~l~~~~~~~~~~~~LkpgG~l~~~~~~~ 174 (197)
+.++|..........+||+|++|||....... .-....|++.+.+.|+|||++.+.+...
T Consensus 246 I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~p~~ 315 (541)
T 2ar0_A 246 IRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVPDN 315 (541)
T ss_dssp EEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEHH
T ss_pred eEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEecCc
Confidence 89999865443335789999999987543211 0011368999999999999988876443
No 272
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=99.13 E-value=3.7e-11 Score=99.23 Aligned_cols=82 Identities=15% Similarity=0.167 Sum_probs=65.7
Q ss_pred CCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhh-cCCceeEEE
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSE-HQQEFDVII 135 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~~~D~I~ 135 (197)
.+.+|||+|||+|..+..+++.. .+|++||+|+.+++.|++++.....++ .+++++++|+.++++. ..++||+|+
T Consensus 93 ~g~~VLDLgcG~G~~al~LA~~g--~~V~~VD~s~~~l~~Ar~N~~~~~~gl--~~i~~i~~Da~~~L~~~~~~~fDvV~ 168 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALMSKA--SQGIYIERNDETAVAARHNIPLLLNEG--KDVNILTGDFKEYLPLIKTFHPDYIY 168 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHHTTC--SEEEEEESCHHHHHHHHHHHHHHSCTT--CEEEEEESCGGGSHHHHHHHCCSEEE
T ss_pred CCCEEEEeCCCchHHHHHHHhcC--CEEEEEECCHHHHHHHHHhHHHhccCC--CcEEEEECcHHHhhhhccCCCceEEE
Confidence 36799999999999999888764 699999999999999999976421011 4799999999886554 235799999
Q ss_pred ECCCCCC
Q psy4592 136 TDSSDPV 142 (197)
Q Consensus 136 ~~~~~~~ 142 (197)
+||+...
T Consensus 169 lDPPrr~ 175 (410)
T 3ll7_A 169 VDPARRS 175 (410)
T ss_dssp ECCEEC-
T ss_pred ECCCCcC
Confidence 9998644
No 273
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=99.12 E-value=4.4e-10 Score=87.20 Aligned_cols=86 Identities=27% Similarity=0.436 Sum_probs=63.8
Q ss_pred HHHHHhhcccCCCCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHH
Q psy4592 44 SEMIAFLPLCSHPNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRF 123 (197)
Q Consensus 44 ~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~ 123 (197)
..++..+. ...+.+|||||||+|.++..+++.. ..+++++|+|+.+++.++++ . ..+++++++|+.+.
T Consensus 21 ~~iv~~~~---~~~~~~VLDiG~G~G~lt~~L~~~~-~~~v~avEid~~~~~~~~~~-~-------~~~v~~i~~D~~~~ 88 (249)
T 3ftd_A 21 KKIAEELN---IEEGNTVVEVGGGTGNLTKVLLQHP-LKKLYVIELDREMVENLKSI-G-------DERLEVINEDASKF 88 (249)
T ss_dssp HHHHHHTT---CCTTCEEEEEESCHHHHHHHHTTSC-CSEEEEECCCHHHHHHHTTS-C-------CTTEEEECSCTTTC
T ss_pred HHHHHhcC---CCCcCEEEEEcCchHHHHHHHHHcC-CCeEEEEECCHHHHHHHHhc-c-------CCCeEEEEcchhhC
Confidence 44444443 2456799999999999999998873 47999999999999999887 3 24799999998764
Q ss_pred Hhhc-CCceeEEEECCCCCC
Q psy4592 124 MSEH-QQEFDVIITDSSDPV 142 (197)
Q Consensus 124 ~~~~-~~~~D~I~~~~~~~~ 142 (197)
.... .+.+ .|++|+|.+.
T Consensus 89 ~~~~~~~~~-~vv~NlPy~i 107 (249)
T 3ftd_A 89 PFCSLGKEL-KVVGNLPYNV 107 (249)
T ss_dssp CGGGSCSSE-EEEEECCTTT
T ss_pred ChhHccCCc-EEEEECchhc
Confidence 2221 1234 8888987644
No 274
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=99.12 E-value=3.8e-11 Score=93.67 Aligned_cols=81 Identities=15% Similarity=0.072 Sum_probs=63.4
Q ss_pred CCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCH-------HHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhh-cC
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDN-------RVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSE-HQ 128 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~-------~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~~ 128 (197)
.+.+|||+|||+|..+..+++.. .+|+++|+++ ++++.|+++.... +. ..+++++++|+.++++. ..
T Consensus 83 ~~~~VLDlgcG~G~~a~~lA~~g--~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~--~~-~~ri~~~~~d~~~~l~~~~~ 157 (258)
T 2r6z_A 83 AHPTVWDATAGLGRDSFVLASLG--LTVTAFEQHPAVACLLSDGIRRALLNPETQ--DT-AARINLHFGNAAEQMPALVK 157 (258)
T ss_dssp GCCCEEETTCTTCHHHHHHHHTT--CCEEEEECCHHHHHHHHHHHHHHHHSHHHH--HH-HTTEEEEESCHHHHHHHHHH
T ss_pred CcCeEEEeeCccCHHHHHHHHhC--CEEEEEECChhhhHHHHHHHHHHHhHHHhh--CC-ccCeEEEECCHHHHHHhhhc
Confidence 45799999999999999988863 6999999999 9999998875431 11 13599999999987653 22
Q ss_pred --CceeEEEECCCCCC
Q psy4592 129 --QEFDVIITDSSDPV 142 (197)
Q Consensus 129 --~~~D~I~~~~~~~~ 142 (197)
++||+|++|++.+.
T Consensus 158 ~~~~fD~V~~dP~~~~ 173 (258)
T 2r6z_A 158 TQGKPDIVYLDPMYPE 173 (258)
T ss_dssp HHCCCSEEEECCCC--
T ss_pred cCCCccEEEECCCCCC
Confidence 68999999998755
No 275
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=99.10 E-value=3.5e-10 Score=99.53 Aligned_cols=134 Identities=12% Similarity=0.110 Sum_probs=86.5
Q ss_pred CCCeEEEEeCCchHhHHHHhcCCC---CccEEEEEcCHHHHHHH--HhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCce
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKHPS---VESAYLVEIDNRVIEVS--KKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEF 131 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~~~---~~~v~~ve~~~~~~~~a--~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 131 (197)
.+.+|||.|||+|.+...+++..+ ..+++|+|+++.+++.| +.++....-........+...|..........+|
T Consensus 321 ~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~kF 400 (878)
T 3s1s_A 321 EDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFANV 400 (878)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGTTE
T ss_pred CCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccccCCC
Confidence 457999999999999998887543 36899999999999999 5554321000011223566666544211234689
Q ss_pred eEEEECCCCCCC-CCcc------------------------cccHHHHHHHHhhcCCCcEEEEEcCCCCcC--hhHHHHH
Q psy4592 132 DVIITDSSDPVG-PAES------------------------LFQASYFELMSRALRPGGIVCSQAGTLWYS--LDCVGNT 184 (197)
Q Consensus 132 D~I~~~~~~~~~-~~~~------------------------l~~~~~~~~~~~~LkpgG~l~~~~~~~~~~--~~~~~~~ 184 (197)
|+|++|||.... .... -....|++.+.+.|+|||++.+.+...+.. ....+.+
T Consensus 401 DVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~s~Lf~sg~~~kkL 480 (878)
T 3s1s_A 401 SVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPKQYLTAQGNESKAF 480 (878)
T ss_dssp EEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEETHHHHCCSHHHHHH
T ss_pred CEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEEChHHhccCChHHHHH
Confidence 999999997321 1000 001458899999999999999887665552 2234445
Q ss_pred HHHHHh
Q psy4592 185 LQHCAS 190 (197)
Q Consensus 185 ~~~~~~ 190 (197)
.+.+.+
T Consensus 481 Rk~LLe 486 (878)
T 3s1s_A 481 REFLVG 486 (878)
T ss_dssp HHHHTT
T ss_pred HHHHHh
Confidence 554443
No 276
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=99.08 E-value=2.5e-11 Score=103.95 Aligned_cols=131 Identities=16% Similarity=0.068 Sum_probs=84.8
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCC---------------CccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcch
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPS---------------VESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDG 120 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~---------------~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~ 120 (197)
+.+.+|||.+||+|++...+.+... ...++|+|+++.++++|+.++... +.. .++.+.++|.
T Consensus 243 p~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~--gi~-~~i~i~~gDt 319 (544)
T 3khk_A 243 PYKGRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIR--GID-FNFGKKNADS 319 (544)
T ss_dssp CCSEEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHT--TCC-CBCCSSSCCT
T ss_pred cCCCeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHh--CCC-cccceeccch
Confidence 3445999999999998877654211 358999999999999999876431 112 2344477886
Q ss_pred HHHHhhcCCceeEEEECCCCCCC--CCcc------------------cc-----cHHHHHHHHhhcCCCcEEEEEcCCCC
Q psy4592 121 FRFMSEHQQEFDVIITDSSDPVG--PAES------------------LF-----QASYFELMSRALRPGGIVCSQAGTLW 175 (197)
Q Consensus 121 ~~~~~~~~~~~D~I~~~~~~~~~--~~~~------------------l~-----~~~~~~~~~~~LkpgG~l~~~~~~~~ 175 (197)
.........+||+|++|||.... .... +. .-.|++.+.+.|+|||++.+.+...+
T Consensus 320 L~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVlP~g~ 399 (544)
T 3khk_A 320 FLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMALLLANGS 399 (544)
T ss_dssp TTSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEEEETHH
T ss_pred hcCcccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceEEEEecchh
Confidence 43222224689999999997531 0000 10 12589999999999999888765433
Q ss_pred c-Ch-hHHHHHHHHHH
Q psy4592 176 Y-SL-DCVGNTLQHCA 189 (197)
Q Consensus 176 ~-~~-~~~~~~~~~~~ 189 (197)
. .. ...+.+.+.+.
T Consensus 400 L~~~~~~~~~iRk~Ll 415 (544)
T 3khk_A 400 MSSNTNNEGEIRKTLV 415 (544)
T ss_dssp HHCCGGGHHHHHHHHH
T ss_pred hhcCcchHHHHHHHHH
Confidence 3 21 23344444443
No 277
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=99.06 E-value=9.1e-11 Score=91.41 Aligned_cols=83 Identities=14% Similarity=0.071 Sum_probs=63.2
Q ss_pred CeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCC--CCCCC---CCeEEEEcchHHHHhhcCCceeE
Q psy4592 59 KKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMA--VGLSD---PRLTVHVGDGFRFMSEHQQEFDV 133 (197)
Q Consensus 59 ~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~--~~~~~---~~~~~~~~d~~~~~~~~~~~~D~ 133 (197)
.+|||+|||+|..+..+++.. .+|++||+++.+.+++++++.... ...+. .+++++++|+.++++...++||+
T Consensus 90 ~~VLDl~~G~G~dal~lA~~g--~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~~~~~fDv 167 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASVG--CRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDITPRPQV 167 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHHT--CCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTCSSCCSE
T ss_pred CEEEEcCCcCCHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHhCcccCCE
Confidence 799999999999999988773 589999999988766665532110 00011 47999999999887654457999
Q ss_pred EEECCCCCCC
Q psy4592 134 IITDSSDPVG 143 (197)
Q Consensus 134 I~~~~~~~~~ 143 (197)
|++||+.+..
T Consensus 168 V~lDP~y~~~ 177 (258)
T 2oyr_A 168 VYLDPMFPHK 177 (258)
T ss_dssp EEECCCCCCC
T ss_pred EEEcCCCCCc
Confidence 9999987654
No 278
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=99.05 E-value=3.4e-10 Score=96.81 Aligned_cols=131 Identities=10% Similarity=0.088 Sum_probs=88.7
Q ss_pred CCCeEEEEeCCchHhHHHHhcC---CCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHH--HhhcCCce
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKH---PSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRF--MSEHQQEF 131 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~---~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~ 131 (197)
.+.+|||.+||+|++...+.+. .+...++|+|+++.++.+|+.++.. .+...++..+.++|.... ......+|
T Consensus 221 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l--~gi~~~~~~I~~gDtL~~d~p~~~~~~f 298 (542)
T 3lkd_A 221 QGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMIL--HGVPIENQFLHNADTLDEDWPTQEPTNF 298 (542)
T ss_dssp TTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHH--TTCCGGGEEEEESCTTTSCSCCSSCCCB
T ss_pred CCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHH--cCCCcCccceEecceecccccccccccc
Confidence 4569999999999988776654 2346899999999999999987543 122224688999997542 11235689
Q ss_pred eEEEECCCCCCC--CCcc------------cc-----cHHHHHHHHhhcC-CCcEEEEEcCCCCc-ChhHHHHHHHHHH
Q psy4592 132 DVIITDSSDPVG--PAES------------LF-----QASYFELMSRALR-PGGIVCSQAGTLWY-SLDCVGNTLQHCA 189 (197)
Q Consensus 132 D~I~~~~~~~~~--~~~~------------l~-----~~~~~~~~~~~Lk-pgG~l~~~~~~~~~-~~~~~~~~~~~~~ 189 (197)
|+|++|||.... .... +. .-.|++.+.+.|+ |||++.+.+...+. .......+.+.+.
T Consensus 299 D~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP~g~Lf~~~~~~~iRk~Ll 377 (542)
T 3lkd_A 299 DGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLPHGVLFRGNAEGTIRKALL 377 (542)
T ss_dssp SEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEETHHHHCCTHHHHHHHHHH
T ss_pred cEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEecchHhhCCchhHHHHHHHH
Confidence 999999996431 1100 00 1248999999999 99999887755443 2222344444443
No 279
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=99.03 E-value=8.5e-10 Score=86.94 Aligned_cols=101 Identities=22% Similarity=0.323 Sum_probs=70.0
Q ss_pred CCCCCcEEEEcCeeeeeccchhhHHHHHHhhcccCCCCCCeEEEEeCCchHhHHHHhcCCCC--ccEEEEEcCHHHHHHH
Q psy4592 20 RKEFGTALILDGIIQCTEFDEFSYSEMIAFLPLCSHPNPKKVLIVGGGDGGVAREVLKHPSV--ESAYLVEIDNRVIEVS 97 (197)
Q Consensus 20 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~--~~v~~ve~~~~~~~~a 97 (197)
++.||.....| ......++..+.. .++.+|||||||+|.++..+++..+. .+++++|+|+++++.+
T Consensus 17 ~k~~GQ~fL~d---------~~i~~~iv~~~~~---~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a 84 (279)
T 3uzu_A 17 RKRFGQNFLVD---------HGVIDAIVAAIRP---ERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRL 84 (279)
T ss_dssp -CCCSCCEECC---------HHHHHHHHHHHCC---CTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHH
T ss_pred cccCCccccCC---------HHHHHHHHHhcCC---CCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHH
Confidence 34567766555 2333445554432 45679999999999999999876431 3499999999999999
Q ss_pred HhhcCCCCCCCCCCCeEEEEcchHHHHhh-cCC----ceeEEEECCCC
Q psy4592 98 KKYLPGMAVGLSDPRLTVHVGDGFRFMSE-HQQ----EFDVIITDSSD 140 (197)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~----~~D~I~~~~~~ 140 (197)
+++. . ++++++++|+.+.... ... ..+.|+.|+|.
T Consensus 85 ~~~~-~-------~~v~~i~~D~~~~~~~~~~~~~~~~~~~vv~NlPY 124 (279)
T 3uzu_A 85 EQRF-G-------ELLELHAGDALTFDFGSIARPGDEPSLRIIGNLPY 124 (279)
T ss_dssp HHHH-G-------GGEEEEESCGGGCCGGGGSCSSSSCCEEEEEECCH
T ss_pred HHhc-C-------CCcEEEECChhcCChhHhcccccCCceEEEEccCc
Confidence 9873 1 4799999999874221 111 34578888874
No 280
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=99.02 E-value=1.6e-10 Score=90.04 Aligned_cols=144 Identities=13% Similarity=0.028 Sum_probs=91.8
Q ss_pred chhhHHHHHHhhcccCCCCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEc
Q psy4592 39 DEFSYSEMIAFLPLCSHPNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVG 118 (197)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 118 (197)
..+-..++.... .+ .+..+|||||||.|+++..+++..+...++++|+...+...+... . . ...++.....
T Consensus 75 AAfKL~ei~eK~-~L--k~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~-~----~-~g~~ii~~~~ 145 (282)
T 3gcz_A 75 GSAKLRWMEERG-YV--KPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMR-T----T-LGWNLIRFKD 145 (282)
T ss_dssp HHHHHHHHHHTT-SC--CCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCC-C----B-TTGGGEEEEC
T ss_pred HHHHHHHHHHhc-CC--CCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCcccccccc-c----c-CCCceEEeeC
Confidence 344445666554 22 455699999999999999888766667899999976532111110 0 0 1123333332
Q ss_pred --chHHHHhhcCCceeEEEECCCCCCCCCccc---ccHHHHHHHHhhcCCC--cEEEEEcCCCCcChhHHHHHHHHHHhh
Q psy4592 119 --DGFRFMSEHQQEFDVIITDSSDPVGPAESL---FQASYFELMSRALRPG--GIVCSQAGTLWYSLDCVGNTLQHCASV 191 (197)
Q Consensus 119 --d~~~~~~~~~~~~D~I~~~~~~~~~~~~~l---~~~~~~~~~~~~Lkpg--G~l~~~~~~~~~~~~~~~~~~~~~~~~ 191 (197)
|.. .....++|+|++|.... ...... -+-.+++-+.+.|+|| |.|++-+..+. .+....+++.+++.
T Consensus 146 ~~dv~---~l~~~~~DvVLSDmApn-sG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~py--g~~~~~l~~~lk~~ 219 (282)
T 3gcz_A 146 KTDVF---NMEVIPGDTLLCDIGES-SPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLCPY--TPLIMEELSRLQLK 219 (282)
T ss_dssp SCCGG---GSCCCCCSEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESCCC--SHHHHHHHHHHHHH
T ss_pred Ccchh---hcCCCCcCEEEecCccC-CCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEecCC--CccHHHHHHHHHHh
Confidence 432 22457899999998755 322211 1123577778999999 99999653321 46778888999999
Q ss_pred CCcccC
Q psy4592 192 FPRLHC 197 (197)
Q Consensus 192 f~~v~~ 197 (197)
|..|++
T Consensus 220 F~~V~~ 225 (282)
T 3gcz_A 220 HGGGLV 225 (282)
T ss_dssp HCCEEE
T ss_pred cCCEEE
Confidence 988763
No 281
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.99 E-value=5.6e-10 Score=98.31 Aligned_cols=116 Identities=13% Similarity=0.081 Sum_probs=78.4
Q ss_pred CCCCCeEEEEeCCchHhHHHHhcCC------------------------------------------CCccEEEEEcCHH
Q psy4592 55 HPNPKKVLIVGGGDGGVAREVLKHP------------------------------------------SVESAYLVEIDNR 92 (197)
Q Consensus 55 ~~~~~~vLdiG~G~G~~~~~l~~~~------------------------------------------~~~~v~~ve~~~~ 92 (197)
...+..+||.+||+|.++.+++... +...++++|+|+.
T Consensus 188 ~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~ 267 (703)
T 3v97_A 188 WQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDAR 267 (703)
T ss_dssp CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCHH
T ss_pred CCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCHH
Confidence 3456799999999999988766421 1147999999999
Q ss_pred HHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhc-CCceeEEEECCCCCCCCCcccccHHHHHH---HHhhcCCCcEEE
Q psy4592 93 VIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEH-QQEFDVIITDSSDPVGPAESLFQASYFEL---MSRALRPGGIVC 168 (197)
Q Consensus 93 ~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~~~D~I~~~~~~~~~~~~~l~~~~~~~~---~~~~LkpgG~l~ 168 (197)
+++.|++|.... ++ ...+++.++|+.+..... .++||+|++|||........-....+++. +.+.+.|||.++
T Consensus 268 av~~A~~N~~~a--gv-~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~lk~~~~g~~~~ 344 (703)
T 3v97_A 268 VIQRARTNARLA--GI-GELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLS 344 (703)
T ss_dssp HHHHHHHHHHHT--TC-GGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHHHHHCTTCEEE
T ss_pred HHHHHHHHHHHc--CC-CCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHHHHHhhCCCCeEE
Confidence 999999997642 22 235899999987742221 23899999999964421111001334444 445556899988
Q ss_pred EEcCC
Q psy4592 169 SQAGT 173 (197)
Q Consensus 169 ~~~~~ 173 (197)
+.+..
T Consensus 345 ilt~~ 349 (703)
T 3v97_A 345 LFSAS 349 (703)
T ss_dssp EEESC
T ss_pred EEeCC
Confidence 86544
No 282
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.95 E-value=2.2e-09 Score=83.34 Aligned_cols=89 Identities=11% Similarity=0.175 Sum_probs=63.4
Q ss_pred HHHHHHhhcccCCCCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHH
Q psy4592 43 YSEMIAFLPLCSHPNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFR 122 (197)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~ 122 (197)
...++..+.. .++.+|||||||+|.++. +.+ .+..+++++|+|+.+++.+++++.. .++++++++|+.+
T Consensus 10 ~~~iv~~~~~---~~~~~VLEIG~G~G~lt~-l~~-~~~~~v~avEid~~~~~~a~~~~~~------~~~v~~i~~D~~~ 78 (252)
T 1qyr_A 10 IDSIVSAINP---QKGQAMVEIGPGLAALTE-PVG-ERLDQLTVIELDRDLAARLQTHPFL------GPKLTIYQQDAMT 78 (252)
T ss_dssp HHHHHHHHCC---CTTCCEEEECCTTTTTHH-HHH-TTCSCEEEECCCHHHHHHHHTCTTT------GGGEEEECSCGGG
T ss_pred HHHHHHhcCC---CCcCEEEEECCCCcHHHH-hhh-CCCCeEEEEECCHHHHHHHHHHhcc------CCceEEEECchhh
Confidence 3455544432 455799999999999999 654 3222399999999999999988753 2589999999876
Q ss_pred H-Hhhc---CCceeEEEECCCCCC
Q psy4592 123 F-MSEH---QQEFDVIITDSSDPV 142 (197)
Q Consensus 123 ~-~~~~---~~~~D~I~~~~~~~~ 142 (197)
. ++.. .+..|.|++|+|...
T Consensus 79 ~~~~~~~~~~~~~~~vvsNlPY~i 102 (252)
T 1qyr_A 79 FNFGELAEKMGQPLRVFGNLPYNI 102 (252)
T ss_dssp CCHHHHHHHHTSCEEEEEECCTTT
T ss_pred CCHHHhhcccCCceEEEECCCCCc
Confidence 3 2211 124589999998544
No 283
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.93 E-value=2.5e-09 Score=83.81 Aligned_cols=145 Identities=14% Similarity=0.022 Sum_probs=91.4
Q ss_pred chhhHHHHHHhhcccCCCCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEc
Q psy4592 39 DEFSYSEMIAFLPLCSHPNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVG 118 (197)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 118 (197)
..+-..++... .++ ++.++||||||++|+|+..+++..+...++++|+...+.. .+.....+..+.+.+..+
T Consensus 66 aa~KL~ei~ek-~l~--~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~-----~P~~~~~~~~~iv~~~~~ 137 (300)
T 3eld_A 66 GAAKIRWLHER-GYL--RITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHE-----KPIHMQTLGWNIVKFKDK 137 (300)
T ss_dssp THHHHHHHHHH-TSC--CCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSC-----CCCCCCBTTGGGEEEECS
T ss_pred HHHHHHHHHHh-CCC--CCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecccccc-----ccccccccCCceEEeecC
Confidence 34445566655 333 5678999999999999999997666678899998654311 010000001112333322
Q ss_pred -chHHHHhhcCCceeEEEECCCCCCCCCccc---ccHHHHHHHHhhcCCC-cEEEEEcCCCCcChhHHHHHHHHHHhhCC
Q psy4592 119 -DGFRFMSEHQQEFDVIITDSSDPVGPAESL---FQASYFELMSRALRPG-GIVCSQAGTLWYSLDCVGNTLQHCASVFP 193 (197)
Q Consensus 119 -d~~~~~~~~~~~~D~I~~~~~~~~~~~~~l---~~~~~~~~~~~~Lkpg-G~l~~~~~~~~~~~~~~~~~~~~~~~~f~ 193 (197)
|+. .....++|+|++|..-. ...... -+..+++-+.+.|+|| |.|++-+..+. .+....++..+++.|.
T Consensus 138 ~di~---~l~~~~~DlVlsD~APn-sG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~~y--G~~~~~ll~~lk~~F~ 211 (300)
T 3eld_A 138 SNVF---TMPTEPSDTLLCDIGES-SSNPLVERDRTMKVLENFERWKHVNTENFCVKVLAPY--HPDVIEKLERLQLRFG 211 (300)
T ss_dssp CCTT---TSCCCCCSEEEECCCCC-CSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESSTT--SHHHHHHHHHHHHHHC
T ss_pred ceee---ecCCCCcCEEeecCcCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecccc--CccHHHHHHHHHHhCC
Confidence 322 22357899999998655 322211 1124577778999999 99999653322 4677888999999998
Q ss_pred cccC
Q psy4592 194 RLHC 197 (197)
Q Consensus 194 ~v~~ 197 (197)
.|++
T Consensus 212 ~V~~ 215 (300)
T 3eld_A 212 GGIV 215 (300)
T ss_dssp CEEE
T ss_pred cEEE
Confidence 8763
No 284
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=98.92 E-value=9.9e-09 Score=80.30 Aligned_cols=121 Identities=15% Similarity=0.094 Sum_probs=91.6
Q ss_pred CCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhh---cCCceeE
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSE---HQQEFDV 133 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~---~~~~~D~ 133 (197)
++..+||+-+|||.++.++++. . .+++.||.+++.++..++|+.. ..+++++..|+...+.. +..+||+
T Consensus 91 n~~~~LDlfaGSGaLgiEaLS~-~-d~~vfvE~~~~a~~~L~~Nl~~------~~~~~V~~~D~~~~L~~l~~~~~~fdL 162 (283)
T 2oo3_A 91 NLNSTLSYYPGSPYFAINQLRS-Q-DRLYLCELHPTEYNFLLKLPHF------NKKVYVNHTDGVSKLNALLPPPEKRGL 162 (283)
T ss_dssp SSSSSCCEEECHHHHHHHHSCT-T-SEEEEECCSHHHHHHHTTSCCT------TSCEEEECSCHHHHHHHHCSCTTSCEE
T ss_pred cCCCceeEeCCcHHHHHHHcCC-C-CeEEEEeCCHHHHHHHHHHhCc------CCcEEEEeCcHHHHHHHhcCCCCCccE
Confidence 4568999999999999998884 3 7999999999999999999864 35899999999887764 2347999
Q ss_pred EEECCCCCCCCCcccccHHHHHHHHh--hcCCCcEEEEEcCCCCcChhHHHHHHHHHHhh
Q psy4592 134 IITDSSDPVGPAESLFQASYFELMSR--ALRPGGIVCSQAGTLWYSLDCVGNTLQHCASV 191 (197)
Q Consensus 134 I~~~~~~~~~~~~~l~~~~~~~~~~~--~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~ 191 (197)
|++|||....... ++.++.+.+ .+.|+|+++++- |.......+.+.+.+++.
T Consensus 163 VfiDPPYe~k~~~----~~vl~~L~~~~~r~~~Gi~v~WY--Pi~~~~~~~~~~~~l~~~ 216 (283)
T 2oo3_A 163 IFIDPSYERKEEY----KEIPYAIKNAYSKFSTGLYCVWY--PVVNKAWTEQFLRKMREI 216 (283)
T ss_dssp EEECCCCCSTTHH----HHHHHHHHHHHHHCTTSEEEEEE--EESSHHHHHHHHHHHHHH
T ss_pred EEECCCCCCCcHH----HHHHHHHHHhCccCCCeEEEEEE--eccchHHHHHHHHHHHhc
Confidence 9999986532221 444544443 568999999864 555556667777777543
No 285
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.88 E-value=9.6e-09 Score=80.87 Aligned_cols=107 Identities=12% Similarity=0.045 Sum_probs=79.6
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCC-----CCccEEEEEcCHH--------------------------HHHHHHhhcCCC
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHP-----SVESAYLVEIDNR--------------------------VIEVSKKYLPGM 104 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~-----~~~~v~~ve~~~~--------------------------~~~~a~~~~~~~ 104 (197)
..+.+|||+|+..|..+..++... +..+++++|..+. .++.+++++...
T Consensus 105 ~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~ 184 (282)
T 2wk1_A 105 NVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNY 184 (282)
T ss_dssp TCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHT
T ss_pred CCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHc
Confidence 457799999999999888776431 2478999996421 356677777642
Q ss_pred CCCCCCCCeEEEEcchHHHHhhc-CCceeEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEE
Q psy4592 105 AVGLSDPRLTVHVGDGFRFMSEH-QQEFDVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQ 170 (197)
Q Consensus 105 ~~~~~~~~~~~~~~d~~~~~~~~-~~~~D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~ 170 (197)
++..++++++.||+.+.++.. .++||+|+.|.-. ...+..+++.+...|+|||++++-
T Consensus 185 --gl~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~------y~~~~~~Le~~~p~L~pGGiIv~D 243 (282)
T 2wk1_A 185 --DLLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDL------YESTWDTLTNLYPKVSVGGYVIVD 243 (282)
T ss_dssp --TCCSTTEEEEESCHHHHSTTCCCCCEEEEEECCCS------HHHHHHHHHHHGGGEEEEEEEEES
T ss_pred --CCCcCceEEEEeCHHHHHhhCCCCCEEEEEEcCCc------cccHHHHHHHHHhhcCCCEEEEEc
Confidence 222368999999999887764 4689999999831 111257899999999999999983
No 286
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.76 E-value=1.2e-08 Score=88.66 Aligned_cols=108 Identities=21% Similarity=0.278 Sum_probs=75.1
Q ss_pred CCeEEEEeCCchHhHHHHhcC----C---------CCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHH
Q psy4592 58 PKKVLIVGGGDGGVAREVLKH----P---------SVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFM 124 (197)
Q Consensus 58 ~~~vLdiG~G~G~~~~~l~~~----~---------~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~ 124 (197)
.+.|||+|||+|-+....++. . ...+|++||.++..+..++.... ++.. ++++++.+|++++-
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~---Ng~~-d~VtVI~gd~eev~ 485 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV---RTWK-RRVTIIESDMRSLP 485 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH---HTTT-TCSEEEESCGGGHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh---cCCC-CeEEEEeCchhhcc
Confidence 458999999999986432211 1 23599999999976655544322 1222 57999999999864
Q ss_pred hh----cCCceeEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 125 SE----HQQEFDVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 125 ~~----~~~~~D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
.. ..++.|+||+........+. + .++.+..+.+.|||||.++=..
T Consensus 486 lp~~~~~~ekVDIIVSElmGsfl~nE-L-~pe~Ld~v~r~Lkp~Gi~iP~~ 534 (745)
T 3ua3_A 486 GIAKDRGFEQPDIIVSELLGSFGDNE-L-SPECLDGVTGFLKPTTISIPQK 534 (745)
T ss_dssp HHHHHTTCCCCSEEEECCCBTTBGGG-S-HHHHHHTTGGGSCTTCEEESCE
T ss_pred cccccCCCCcccEEEEeccccccchh-c-cHHHHHHHHHhCCCCcEEECCc
Confidence 31 15799999999875443222 2 2678888899999999887543
No 287
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=98.75 E-value=5.9e-08 Score=74.55 Aligned_cols=140 Identities=16% Similarity=0.106 Sum_probs=85.9
Q ss_pred hhhHHHHHHhhcccCCCCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCe---EEE
Q psy4592 40 EFSYSEMIAFLPLCSHPNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRL---TVH 116 (197)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~---~~~ 116 (197)
.+-..++.... ..+++.+|+|+||+.|+|+..+++..+...+.+..+.... . -.+. .. ..+.+ ++.
T Consensus 59 ayKL~EIdeK~---likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~-~----~~P~--~~-~~~Gv~~i~~~ 127 (269)
T 2px2_A 59 TAKLRWLVERR---FVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG-H----EEPM--LM-QSYGWNIVTMK 127 (269)
T ss_dssp HHHHHHHHHTT---SCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT-S----CCCC--CC-CSTTGGGEEEE
T ss_pred HHHHHHHHHcC---CCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc-c----cCCC--cc-cCCCceEEEee
Confidence 34445666553 2366789999999999999998876333344455543331 0 0011 00 00233 555
Q ss_pred Ec-chHHHHhhcCCceeEEEECCCCCCCCCcccccH---HHHHHHHhhcCCCc-EEEEEcCCCCcChhHHHHHHHHHHhh
Q psy4592 117 VG-DGFRFMSEHQQEFDVIITDSSDPVGPAESLFQA---SYFELMSRALRPGG-IVCSQAGTLWYSLDCVGNTLQHCASV 191 (197)
Q Consensus 117 ~~-d~~~~~~~~~~~~D~I~~~~~~~~~~~~~l~~~---~~~~~~~~~LkpgG-~l~~~~~~~~~~~~~~~~~~~~~~~~ 191 (197)
++ |+.+ ....++|+|++|+.-. ......... ..++-+.+.|+||| .|++-+.. ...+.+.+.++.+++.
T Consensus 128 ~G~Df~~---~~~~~~DvVLSDMAPn-SG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFq--g~~~~~~~~l~~lk~~ 201 (269)
T 2px2_A 128 SGVDVFY---KPSEISDTLLCDIGES-SPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKILC--PYMPKVIEKLESLQRR 201 (269)
T ss_dssp CSCCGGG---SCCCCCSEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC--TTSHHHHHHHHHHHHH
T ss_pred ccCCccC---CCCCCCCEEEeCCCCC-CCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEECC--CCchHHHHHHHHHHHH
Confidence 57 9765 2245899999998644 333221111 24666779999999 88887655 2236677777888888
Q ss_pred CCccc
Q psy4592 192 FPRLH 196 (197)
Q Consensus 192 f~~v~ 196 (197)
|..|+
T Consensus 202 F~~vk 206 (269)
T 2px2_A 202 FGGGL 206 (269)
T ss_dssp HCCEE
T ss_pred cCCEE
Confidence 87765
No 288
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=98.74 E-value=1.5e-07 Score=74.55 Aligned_cols=113 Identities=19% Similarity=0.199 Sum_probs=74.8
Q ss_pred CCeEEEEeCCchHhHHHHh----cCCCCc--cEEEEEcCH------------HHHHHHHhhcCCCCCCCCCCCeEEEEcc
Q psy4592 58 PKKVLIVGGGDGGVAREVL----KHPSVE--SAYLVEIDN------------RVIEVSKKYLPGMAVGLSDPRLTVHVGD 119 (197)
Q Consensus 58 ~~~vLdiG~G~G~~~~~l~----~~~~~~--~v~~ve~~~------------~~~~~a~~~~~~~~~~~~~~~~~~~~~d 119 (197)
.-+|||+|.|+|....... +..+.. +++.+|..+ +..+......+.... ..-.+++..+|
T Consensus 97 ~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~--~~v~L~l~~GD 174 (308)
T 3vyw_A 97 VIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEG--ERLSLKVLLGD 174 (308)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEEC--SSEEEEEEESC
T ss_pred CcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccC--CcEEEEEEech
Confidence 3589999999998654322 223333 456666422 112222222222100 12246778999
Q ss_pred hHHHHhhc-CCceeEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEcCC
Q psy4592 120 GFRFMSEH-QQEFDVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQAGT 173 (197)
Q Consensus 120 ~~~~~~~~-~~~~D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~~~ 173 (197)
+.+.++.- ..++|+|+.|++.|.. ++.++++++++.++++++|||+++..+..
T Consensus 175 a~~~l~~l~~~~~Da~flDgFsP~k-NPeLWs~e~f~~l~~~~~pgg~laTYtaa 228 (308)
T 3vyw_A 175 ARKRIKEVENFKADAVFHDAFSPYK-NPELWTLDFLSLIKERIDEKGYWVSYSSS 228 (308)
T ss_dssp HHHHGGGCCSCCEEEEEECCSCTTT-SGGGGSHHHHHHHHTTEEEEEEEEESCCC
T ss_pred HHHHHhhhcccceeEEEeCCCCccc-CcccCCHHHHHHHHHHhCCCcEEEEEeCc
Confidence 99988763 3489999999987655 56789999999999999999999986544
No 289
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.70 E-value=4e-09 Score=91.30 Aligned_cols=104 Identities=15% Similarity=0.216 Sum_probs=72.8
Q ss_pred CeEEEEeCCchHhHHHHhc---C-CCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEE
Q psy4592 59 KKVLIVGGGDGGVAREVLK---H-PSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVI 134 (197)
Q Consensus 59 ~~vLdiG~G~G~~~~~l~~---~-~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I 134 (197)
..|||+|||+|-+....++ . ....+|++||.+|. ...+++.... ++. .++++++++|++++ . .++++|+|
T Consensus 359 ~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~-A~~a~~~v~~--N~~-~dkVtVI~gd~eev-~-LPEKVDII 432 (637)
T 4gqb_A 359 QVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPN-AVVTLENWQF--EEW-GSQVTVVSSDMREW-V-APEKADII 432 (637)
T ss_dssp EEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHH-HHHHHHHHHH--HTT-GGGEEEEESCTTTC-C-CSSCEEEE
T ss_pred cEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHH-HHHHHHHHHh--ccC-CCeEEEEeCcceec-c-CCcccCEE
Confidence 5799999999988443332 2 22247899999984 4556554332 122 35899999998874 2 24799999
Q ss_pred EECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEE
Q psy4592 135 ITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQ 170 (197)
Q Consensus 135 ~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~ 170 (197)
|+.+.....-.... .+.+....+.|||||.++=.
T Consensus 433 VSEwMG~fLl~E~m--levL~Ardr~LKPgGimiPs 466 (637)
T 4gqb_A 433 VSELLGSFADNELS--PECLDGAQHFLKDDGVSIPG 466 (637)
T ss_dssp ECCCCBTTBGGGCH--HHHHHHHGGGEEEEEEEESC
T ss_pred EEEcCcccccccCC--HHHHHHHHHhcCCCcEEccc
Confidence 99887655444332 46778888999999998743
No 290
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=98.67 E-value=2.8e-07 Score=69.92 Aligned_cols=143 Identities=13% Similarity=0.112 Sum_probs=92.8
Q ss_pred chhhHHHHHHhhcccCCCCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEc
Q psy4592 39 DEFSYSEMIAFLPLCSHPNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVG 118 (197)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 118 (197)
..+-..++.... .+ +...+|+||||++|+++..++...+...|.++|+-+.-.+ .+.+..-+.-+.+++..+
T Consensus 63 a~~KL~ei~ek~-~l--~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe-----~P~~~~s~gwn~v~fk~g 134 (267)
T 3p8z_A 63 GSAKLQWFVERN-MV--IPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHE-----EPVPMSTYGWNIVKLMSG 134 (267)
T ss_dssp HHHHHHHHHHTT-SS--CCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSC-----CCCCCCCTTTTSEEEECS
T ss_pred HHHHHHHHHHhc-CC--CCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCcc-----CcchhhhcCcCceEEEec
Confidence 344445666555 22 4566999999999999998887767679999998654321 111111112357999999
Q ss_pred -chHHHHhhcCCceeEEEECCCCCCCCCccccc---HHHHHHHHhhcCCCcEEEEEcCCCCcChhHHHHHHHHHHhhCCc
Q psy4592 119 -DGFRFMSEHQQEFDVIITDSSDPVGPAESLFQ---ASYFELMSRALRPGGIVCSQAGTLWYSLDCVGNTLQHCASVFPR 194 (197)
Q Consensus 119 -d~~~~~~~~~~~~D~I~~~~~~~~~~~~~l~~---~~~~~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~f~~ 194 (197)
|... + ...++|.|+||+.. ..+++.... -..++-+.+.|++ |-|++-+.+|.. +...+.++.++..|..
T Consensus 135 vDv~~-~--~~~~~DtllcDIge-Ss~~~~vE~~RtlrvLela~~wL~~-~~fc~KVl~py~--p~v~e~l~~lq~~fgg 207 (267)
T 3p8z_A 135 KDVFY-L--PPEKCDTLLCDIGE-SSPSPTVEESRTIRVLKMVEPWLKN-NQFCIKVLNPYM--PTVIEHLERLQRKHGG 207 (267)
T ss_dssp CCGGG-C--CCCCCSEEEECCCC-CCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEEESCCCS--HHHHHHHHHHHHHHCC
T ss_pred cceee-c--CCccccEEEEecCC-CCCChhhhhhHHHHHHHHHHHhccc-CCEEEEEccCCC--hhHHHHHHHHHHHhCC
Confidence 8633 2 23679999999875 433332211 2356666788998 888887766544 3445667777777765
Q ss_pred cc
Q psy4592 195 LH 196 (197)
Q Consensus 195 v~ 196 (197)
+.
T Consensus 208 ~l 209 (267)
T 3p8z_A 208 ML 209 (267)
T ss_dssp EE
T ss_pred Ee
Confidence 43
No 291
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=98.61 E-value=1.9e-07 Score=72.99 Aligned_cols=143 Identities=14% Similarity=0.099 Sum_probs=91.6
Q ss_pred hhhHHHHHHhhcccCCCCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEc-
Q psy4592 40 EFSYSEMIAFLPLCSHPNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVG- 118 (197)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~- 118 (197)
.+-..++.... .......||||||++|+++..++...+...|.++|+-..-.+ .|.+...+.-..+.++.+
T Consensus 80 ~~KL~ei~~~~---~l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he-----~P~~~~ql~w~lV~~~~~~ 151 (321)
T 3lkz_A 80 TAKLRWLVERR---FLEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHE-----EPQLVQSYGWNIVTMKSGV 151 (321)
T ss_dssp HHHHHHHHHTT---SCCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSC-----CCCCCCBTTGGGEEEECSC
T ss_pred HHHHHHHHHhc---CCCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCcc-----CcchhhhcCCcceEEEecc
Confidence 34445555542 224556999999999999998887767678999998654211 011111122235778877
Q ss_pred chHHHHhhcCCceeEEEECCCCCCCCCccccc---HHHHHHHHhhcCCC-cEEEEEcCCCCcChhHHHHHHHHHHhhCCc
Q psy4592 119 DGFRFMSEHQQEFDVIITDSSDPVGPAESLFQ---ASYFELMSRALRPG-GIVCSQAGTLWYSLDCVGNTLQHCASVFPR 194 (197)
Q Consensus 119 d~~~~~~~~~~~~D~I~~~~~~~~~~~~~l~~---~~~~~~~~~~Lkpg-G~l~~~~~~~~~~~~~~~~~~~~~~~~f~~ 194 (197)
|++. ++ ..++|.|++|.. ...+++.... -..|+-+.+.|++| |-|++-+.+|.. +...+.++.++..|+.
T Consensus 152 Dv~~-l~--~~~~D~ivcDig-eSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~pY~--~~v~e~l~~lq~~fgg 225 (321)
T 3lkz_A 152 DVFY-RP--SECCDTLLCDIG-ESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLCPYM--PKVIEKMELLQRRYGG 225 (321)
T ss_dssp CTTS-SC--CCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTTS--HHHHHHHHHHHHHHCC
T ss_pred CHhh-CC--CCCCCEEEEECc-cCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcCCCC--hHHHHHHHHHHHHhCC
Confidence 7643 22 267999999998 3333332211 22566667889999 899998766544 4555777788777766
Q ss_pred cc
Q psy4592 195 LH 196 (197)
Q Consensus 195 v~ 196 (197)
+.
T Consensus 226 ~l 227 (321)
T 3lkz_A 226 GL 227 (321)
T ss_dssp EE
T ss_pred Ee
Confidence 53
No 292
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.55 E-value=5e-07 Score=70.65 Aligned_cols=83 Identities=22% Similarity=0.223 Sum_probs=65.5
Q ss_pred HHHHHhhcccCCCCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHH
Q psy4592 44 SEMIAFLPLCSHPNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRF 123 (197)
Q Consensus 44 ~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~ 123 (197)
.+++..+.. .++..++|.+||.|+.+.++++. ..+++++|.||.+++.|++ +. . +++++++++..++
T Consensus 12 ~e~le~L~~---~~gg~~VD~T~G~GGHS~~il~~--~g~VigiD~Dp~Ai~~A~~-L~------~-~rv~lv~~~f~~l 78 (285)
T 1wg8_A 12 QEALDLLAV---RPGGVYVDATLGGAGHARGILER--GGRVIGLDQDPEAVARAKG-LH------L-PGLTVVQGNFRHL 78 (285)
T ss_dssp HHHHHHHTC---CTTCEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHH-TC------C-TTEEEEESCGGGH
T ss_pred HHHHHhhCC---CCCCEEEEeCCCCcHHHHHHHHC--CCEEEEEeCCHHHHHHHHh-hc------c-CCEEEEECCcchH
Confidence 455555532 45579999999999999999987 3799999999999999998 64 2 5899999998875
Q ss_pred H---hhc-CCceeEEEECCC
Q psy4592 124 M---SEH-QQEFDVIITDSS 139 (197)
Q Consensus 124 ~---~~~-~~~~D~I~~~~~ 139 (197)
- ... .+++|.|++|..
T Consensus 79 ~~~L~~~g~~~vDgIL~DLG 98 (285)
T 1wg8_A 79 KRHLAALGVERVDGILADLG 98 (285)
T ss_dssp HHHHHHTTCSCEEEEEEECS
T ss_pred HHHHHHcCCCCcCEEEeCCc
Confidence 3 221 357999999764
No 293
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=98.44 E-value=6e-07 Score=70.19 Aligned_cols=131 Identities=18% Similarity=0.272 Sum_probs=80.5
Q ss_pred hhHHHHHHhhcc--cCCCCCCeEEEEeC------CchHhHHHHhcCCCC-ccEEEEEcCHHHHHHHHhhcCCCCCCCCCC
Q psy4592 41 FSYSEMIAFLPL--CSHPNPKKVLIVGG------GDGGVAREVLKHPSV-ESAYLVEIDNRVIEVSKKYLPGMAVGLSDP 111 (197)
Q Consensus 41 ~~~~~~~~~~~~--~~~~~~~~vLdiG~------G~G~~~~~l~~~~~~-~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~ 111 (197)
..|+++..++.- +-.+.+.+|||+|+ ..|++. +.+..+. +.++++|+.|-. ...
T Consensus 91 ~kytqlcqyl~~~~~~vp~gmrVLDLGA~s~kg~APGS~V--Lr~~~p~g~~VVavDL~~~~---------------sda 153 (344)
T 3r24_A 91 AKYTQLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGTAV--LRQWLPTGTLLVDSDLNDFV---------------SDA 153 (344)
T ss_dssp HHHHHHHHHHTTSCCCCCTTCEEEEESCCCTTSBCHHHHH--HHHHSCTTCEEEEEESSCCB---------------CSS
T ss_pred HHHHHHHHHhccccEeecCCCEEEeCCCCCCCCCCCcHHH--HHHhCCCCcEEEEeeCcccc---------------cCC
Confidence 457888777732 33467789999996 677743 2223443 599999997733 112
Q ss_pred CeEEEEcchHHHHhhcCCceeEEEECCCCCCCCC---cc----cccHHHHHHHHhhcCCCcEEEEEcCCCCcChhHHHHH
Q psy4592 112 RLTVHVGDGFRFMSEHQQEFDVIITDSSDPVGPA---ES----LFQASYFELMSRALRPGGIVCSQAGTLWYSLDCVGNT 184 (197)
Q Consensus 112 ~~~~~~~d~~~~~~~~~~~~D~I~~~~~~~~~~~---~~----l~~~~~~~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~ 184 (197)
+ .++++|..+. ....+||+|++|++-..... .+ -+.+..++-+.+.|+|||.|++-+...... +.
T Consensus 154 ~-~~IqGD~~~~--~~~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQGsg~-~~---- 225 (344)
T 3r24_A 154 D-STLIGDCATV--HTANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSWN-AD---- 225 (344)
T ss_dssp S-EEEESCGGGE--EESSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSCC-HH----
T ss_pred C-eEEEcccccc--ccCCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecCCCH-HH----
Confidence 3 4488996542 23578999999986433211 11 122566777889999999999976332221 32
Q ss_pred HHHHHhhCCccc
Q psy4592 185 LQHCASVFPRLH 196 (197)
Q Consensus 185 ~~~~~~~f~~v~ 196 (197)
+..+++.|..|+
T Consensus 226 L~~lrk~F~~VK 237 (344)
T 3r24_A 226 LYKLMGHFSWWT 237 (344)
T ss_dssp HHHHHTTEEEEE
T ss_pred HHHHHhhCCeEE
Confidence 333445665554
No 294
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.37 E-value=6.6e-07 Score=73.07 Aligned_cols=117 Identities=15% Similarity=0.180 Sum_probs=73.8
Q ss_pred CCCCeEEEEeCCchHhHHHHh--------cC-------CCCccEEEEEcCHHHHHHHHhhcCCCCCCC--------CCCC
Q psy4592 56 PNPKKVLIVGGGDGGVAREVL--------KH-------PSVESAYLVEIDNRVIEVSKKYLPGMAVGL--------SDPR 112 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~--------~~-------~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~--------~~~~ 112 (197)
+.+.+|+|+|||+|..+..+. +. .+..+++.-|+-.+.....-+.++.....+ ...+
T Consensus 51 ~~~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~ 130 (374)
T 3b5i_A 51 PPPFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNR 130 (374)
T ss_dssp CCCEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCB
T ss_pred CCceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCC
Confidence 345799999999998877651 11 245788899987776655555544321000 0011
Q ss_pred eEEEEcchHHHHh--hcCCceeEEEECCCCCCCCC-c-ccc--------------------------------cHHHHHH
Q psy4592 113 LTVHVGDGFRFMS--EHQQEFDVIITDSSDPVGPA-E-SLF--------------------------------QASYFEL 156 (197)
Q Consensus 113 ~~~~~~d~~~~~~--~~~~~~D~I~~~~~~~~~~~-~-~l~--------------------------------~~~~~~~ 156 (197)
-.+..+....+.. .+.+++|+|+++...||... + .+. -..+++.
T Consensus 131 ~~f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ 210 (374)
T 3b5i_A 131 SYFVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRA 210 (374)
T ss_dssp CSEEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 1244444333222 23679999999999999642 1 110 0246888
Q ss_pred HHhhcCCCcEEEEEcC
Q psy4592 157 MSRALRPGGIVCSQAG 172 (197)
Q Consensus 157 ~~~~LkpgG~l~~~~~ 172 (197)
.++.|+|||.+++...
T Consensus 211 ra~eL~pGG~mvl~~~ 226 (374)
T 3b5i_A 211 RAAEVKRGGAMFLVCL 226 (374)
T ss_dssp HHHHEEEEEEEEEEEE
T ss_pred HHHHhCCCCEEEEEEe
Confidence 8999999999999874
No 295
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=98.32 E-value=4.6e-07 Score=77.40 Aligned_cols=114 Identities=19% Similarity=0.182 Sum_probs=74.2
Q ss_pred CCCCeEEEEeCCchHhHHHHhcC----CC---------CccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHH
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKH----PS---------VESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFR 122 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~----~~---------~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~ 122 (197)
..+.+|+|-+||+|++...+.+. .+ ...++|+|+++.+..+|+-++-.. + .....+..+|...
T Consensus 216 ~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lh--g--~~~~~I~~~dtL~ 291 (530)
T 3ufb_A 216 QLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLH--G--LEYPRIDPENSLR 291 (530)
T ss_dssp CTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHH--T--CSCCEEECSCTTC
T ss_pred CCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhc--C--Ccccccccccccc
Confidence 34569999999999998765532 11 246999999999999998774321 1 1234566777543
Q ss_pred HHhh---cCCceeEEEECCCCCCCCC------------cccccHHHHHHHHhhcC-------CCcEEEEEcCC
Q psy4592 123 FMSE---HQQEFDVIITDSSDPVGPA------------ESLFQASYFELMSRALR-------PGGIVCSQAGT 173 (197)
Q Consensus 123 ~~~~---~~~~~D~I~~~~~~~~~~~------------~~l~~~~~~~~~~~~Lk-------pgG~l~~~~~~ 173 (197)
.... ...+||+|++|||...... ..-..-.|++.+.+.|| |||++.+.+..
T Consensus 292 ~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~avVlP~ 364 (530)
T 3ufb_A 292 FPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAVVVPN 364 (530)
T ss_dssp SCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEEEEEEH
T ss_pred CchhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceEEEEecc
Confidence 2111 1347999999999743210 00001347788888887 79998887644
No 296
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.30 E-value=1.9e-06 Score=69.93 Aligned_cols=70 Identities=19% Similarity=0.255 Sum_probs=53.8
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
+++.+|||+||+.|+++..+.+.. ..|++||+.+ +-.... ..++++++.+|+..+.+ ...++|+|+
T Consensus 210 ~~G~~vlDLGAaPGGWT~~l~~rg--~~V~aVD~~~-l~~~l~----------~~~~V~~~~~d~~~~~~-~~~~~D~vv 275 (375)
T 4auk_A 210 ANGMWAVDLGACPGGWTYQLVKRN--MWVYSVDNGP-MAQSLM----------DTGQVTWLREDGFKFRP-TRSNISWMV 275 (375)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTT--CEEEEECSSC-CCHHHH----------TTTCEEEECSCTTTCCC-CSSCEEEEE
T ss_pred CCCCEEEEeCcCCCHHHHHHHHCC--CEEEEEEhhh-cChhhc----------cCCCeEEEeCccccccC-CCCCcCEEE
Confidence 467899999999999999998874 6999999764 222111 23689999999876433 246899999
Q ss_pred ECCC
Q psy4592 136 TDSS 139 (197)
Q Consensus 136 ~~~~ 139 (197)
+|+.
T Consensus 276 sDm~ 279 (375)
T 4auk_A 276 CDMV 279 (375)
T ss_dssp ECCS
T ss_pred EcCC
Confidence 9995
No 297
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.29 E-value=1.8e-06 Score=70.59 Aligned_cols=110 Identities=11% Similarity=-0.020 Sum_probs=69.1
Q ss_pred CCeEEEEeCCchHhHHHHhcC-----------------CCCccEEEEEcC-----------HHHHHHHHhhcCCCCCCCC
Q psy4592 58 PKKVLIVGGGDGGVAREVLKH-----------------PSVESAYLVEID-----------NRVIEVSKKYLPGMAVGLS 109 (197)
Q Consensus 58 ~~~vLdiG~G~G~~~~~l~~~-----------------~~~~~v~~ve~~-----------~~~~~~a~~~~~~~~~~~~ 109 (197)
+.+|+|+||++|..+..+... .+..+++.-|+- |.+.+.+++... .
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g------~ 126 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENG------R 126 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTC------C
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhcc------C
Confidence 679999999999877665432 234567777765 334333333211 1
Q ss_pred CCCeEEEEcchHHHHhh--cCCceeEEEECCCCCCCCCc--cccc---------------------------------HH
Q psy4592 110 DPRLTVHVGDGFRFMSE--HQQEFDVIITDSSDPVGPAE--SLFQ---------------------------------AS 152 (197)
Q Consensus 110 ~~~~~~~~~d~~~~~~~--~~~~~D~I~~~~~~~~~~~~--~l~~---------------------------------~~ 152 (197)
..+-.++.+....+... +.+++|+|+++...||.... .+.. ..
T Consensus 127 ~~~~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~ 206 (384)
T 2efj_A 127 KIGSCLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTT 206 (384)
T ss_dssp CTTSEEEEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHH
T ss_pred CCCceEEEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHH
Confidence 11235666655444332 36799999999999996321 1110 12
Q ss_pred HHHHHHhhcCCCcEEEEEcCC
Q psy4592 153 YFELMSRALRPGGIVCSQAGT 173 (197)
Q Consensus 153 ~~~~~~~~LkpgG~l~~~~~~ 173 (197)
||+.-++.|+|||++++....
T Consensus 207 FL~~Ra~eL~pGG~mvl~~~g 227 (384)
T 2efj_A 207 FLRIHSEELISRGRMLLTFIC 227 (384)
T ss_dssp HHHHHHHHEEEEEEEEEEEEC
T ss_pred HHHHHHHHhccCCeEEEEEec
Confidence 366778999999999998743
No 298
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.27 E-value=5.2e-06 Score=73.03 Aligned_cols=116 Identities=17% Similarity=0.210 Sum_probs=79.1
Q ss_pred CCCeEEEEeCCchHhHHHHhcCC------------CCccEEEEEcCH---HHHHHHHhhcC-----------CCCC---C
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKHP------------SVESAYLVEIDN---RVIEVSKKYLP-----------GMAV---G 107 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~~------------~~~~v~~ve~~~---~~~~~a~~~~~-----------~~~~---~ 107 (197)
++-+|+|+|.|+|.....+.+.. ...+++.+|..| +.+..+-+.++ .|.. +
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 137 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAG 137 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSE
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCC
Confidence 34599999999998776655421 125789999844 44433222111 1100 0
Q ss_pred -----CC--CCCeEEEEcchHHHHhhc----CCceeEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEcCC
Q psy4592 108 -----LS--DPRLTVHVGDGFRFMSEH----QQEFDVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQAGT 173 (197)
Q Consensus 108 -----~~--~~~~~~~~~d~~~~~~~~----~~~~D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~~~ 173 (197)
+. .-.+++..+|+.+.++.- ..++|+++.|++.+.. ++.+++.+++..+.++++|||.+...+..
T Consensus 138 ~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~~-np~~w~~~~~~~l~~~~~~g~~~~t~~~~ 213 (689)
T 3pvc_A 138 CHRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPAK-NPDMWNEQLFNAMARMTRPGGTFSTFTAA 213 (689)
T ss_dssp EEEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC---CCTTCSHHHHHHHHHHEEEEEEEEESCCC
T ss_pred ceEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCCCC-ChhhhhHHHHHHHHHHhCCCCEEEeccCc
Confidence 11 125778999999988753 4689999999987665 44688899999999999999999875433
No 299
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=98.27 E-value=5.7e-06 Score=72.57 Aligned_cols=114 Identities=20% Similarity=0.247 Sum_probs=80.2
Q ss_pred CeEEEEeCCchHhHHHHhcC------------CCCccEEEEEc---CHHHHHHHHhhcCC-----------CCC---C--
Q psy4592 59 KKVLIVGGGDGGVAREVLKH------------PSVESAYLVEI---DNRVIEVSKKYLPG-----------MAV---G-- 107 (197)
Q Consensus 59 ~~vLdiG~G~G~~~~~l~~~------------~~~~~v~~ve~---~~~~~~~a~~~~~~-----------~~~---~-- 107 (197)
-+|||+|.|+|......+.. ....+++++|. +++.+..+-..++. |.. +
T Consensus 68 ~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 147 (676)
T 3ps9_A 68 FVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGCH 147 (676)
T ss_dssp EEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSEEE
T ss_pred eEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCCce
Confidence 59999999999876665432 12246899998 77766633332111 100 0
Q ss_pred ---CC--CCCeEEEEcchHHHHhhc----CCceeEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEcCC
Q psy4592 108 ---LS--DPRLTVHVGDGFRFMSEH----QQEFDVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQAGT 173 (197)
Q Consensus 108 ---~~--~~~~~~~~~d~~~~~~~~----~~~~D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~~~ 173 (197)
+. ...+++..+|+.+.++.. ..+||+|+.|++.+.. ++.+++.++++.++++++|||.+...+..
T Consensus 148 ~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p~~-np~~w~~~~~~~l~~~~~~g~~~~t~~~~ 221 (676)
T 3ps9_A 148 RLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPAK-NPDMWTQNLFNAMARLARPGGTLATFTSA 221 (676)
T ss_dssp EEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSCGGG-CGGGSCHHHHHHHHHHEEEEEEEEESCCC
T ss_pred EEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCCCcC-ChhhhhHHHHHHHHHHhCCCCEEEeccCc
Confidence 01 135678899999988763 3689999999976554 45788999999999999999999976533
No 300
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=98.25 E-value=3.6e-06 Score=67.31 Aligned_cols=75 Identities=23% Similarity=0.247 Sum_probs=59.6
Q ss_pred CCCCeEEEEeCCchHhHHHHhcC-CCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHh---hc--CC
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKH-PSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMS---EH--QQ 129 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~-~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~---~~--~~ 129 (197)
+++..++|..+|.|+.+.++++. .+..+++++|+||.+++.++ .+ ...++++++++..++.. .. .+
T Consensus 56 ~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL-------~~~Rv~lv~~nF~~l~~~L~~~g~~~ 127 (347)
T 3tka_A 56 RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TI-------DDPRFSIIHGPFSALGEYVAERDLIG 127 (347)
T ss_dssp CTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TC-------CCTTEEEEESCGGGHHHHHHHTTCTT
T ss_pred CCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hh-------cCCcEEEEeCCHHHHHHHHHhcCCCC
Confidence 45679999999999999999876 45679999999999999984 43 13589999998776533 21 13
Q ss_pred ceeEEEECC
Q psy4592 130 EFDVIITDS 138 (197)
Q Consensus 130 ~~D~I~~~~ 138 (197)
++|.|+.|.
T Consensus 128 ~vDgILfDL 136 (347)
T 3tka_A 128 KIDGILLDL 136 (347)
T ss_dssp CEEEEEEEC
T ss_pred cccEEEECC
Confidence 699999985
No 301
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=98.19 E-value=2.6e-06 Score=69.12 Aligned_cols=114 Identities=12% Similarity=0.063 Sum_probs=78.5
Q ss_pred CCCCeEEEEeCCchHhHHHHhcC----------------CCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcc
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKH----------------PSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGD 119 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~----------------~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d 119 (197)
+++-+|+|+||++|..+..+... .+..+++.-|+-.+....+-+.++... ...+-.+..+.
T Consensus 50 ~~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~---~~~~~~f~~gv 126 (359)
T 1m6e_X 50 TTRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIEN---DVDGVCFINGV 126 (359)
T ss_dssp SSEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSC---SCTTCEEEEEE
T ss_pred CCceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhc---ccCCCEEEEec
Confidence 45578999999999866554433 345789999998888888877765421 11133556665
Q ss_pred hHHHHh--hcCCceeEEEECCCCCCCCC-c-c--------------------ccc-------HHHHHHHHhhcCCCcEEE
Q psy4592 120 GFRFMS--EHQQEFDVIITDSSDPVGPA-E-S--------------------LFQ-------ASYFELMSRALRPGGIVC 168 (197)
Q Consensus 120 ~~~~~~--~~~~~~D~I~~~~~~~~~~~-~-~--------------------l~~-------~~~~~~~~~~LkpgG~l~ 168 (197)
...+.. .+.+++|+|+++...||... + . .+. ..|++.-++.|+|||.++
T Consensus 127 pgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mv 206 (359)
T 1m6e_X 127 PGSFYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMV 206 (359)
T ss_dssp ESCSSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEE
T ss_pred chhhhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEE
Confidence 444332 23679999999999999532 1 1 111 246888899999999999
Q ss_pred EEcC
Q psy4592 169 SQAG 172 (197)
Q Consensus 169 ~~~~ 172 (197)
+...
T Consensus 207 l~~~ 210 (359)
T 1m6e_X 207 LTIL 210 (359)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9873
No 302
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=98.08 E-value=4.4e-06 Score=67.68 Aligned_cols=88 Identities=16% Similarity=0.181 Sum_probs=64.2
Q ss_pred CCCCCcEEEEcCeeeeeccchhhHHHHHHhhcccCC---CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHH
Q psy4592 20 RKEFGTALILDGIIQCTEFDEFSYSEMIAFLPLCSH---PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEV 96 (197)
Q Consensus 20 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~ 96 (197)
++.+|...+.| .....++...+..... .....|||||.|.|.++..++......++++||+|+.++..
T Consensus 27 kk~lGQnFL~d---------~~i~~~Iv~~~~l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~ 97 (353)
T 1i4w_A 27 KFFYGFKYLWN---------PTVYNKIFDKLDLTKTYKHPEELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKF 97 (353)
T ss_dssp CCGGGCCCBCC---------HHHHHHHHHHHCGGGTCCCTTTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHH
T ss_pred CCCCCcCccCC---------HHHHHHHHHhccCCcccCcCCCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHH
Confidence 56678776665 3344555555543211 03478999999999999999975333689999999999999
Q ss_pred HHhhcCCCCCCCCCCCeEEEEcchHHH
Q psy4592 97 SKKYLPGMAVGLSDPRLTVHVGDGFRF 123 (197)
Q Consensus 97 a~~~~~~~~~~~~~~~~~~~~~d~~~~ 123 (197)
.++.+. .++++++.+|+.++
T Consensus 98 L~~~~~-------~~~l~ii~~D~l~~ 117 (353)
T 1i4w_A 98 LNAKFE-------GSPLQILKRDPYDW 117 (353)
T ss_dssp HHHHTT-------TSSCEEECSCTTCH
T ss_pred HHHhcc-------CCCEEEEECCccch
Confidence 988762 25899999999764
No 303
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=97.88 E-value=5.1e-06 Score=58.55 Aligned_cols=39 Identities=23% Similarity=0.173 Sum_probs=31.4
Q ss_pred CCCCeEEEEeCCch-HhHHHHhcCCCCccEEEEEcCHHHHH
Q psy4592 56 PNPKKVLIVGGGDG-GVAREVLKHPSVESAYLVEIDNRVIE 95 (197)
Q Consensus 56 ~~~~~vLdiG~G~G-~~~~~l~~~~~~~~v~~ve~~~~~~~ 95 (197)
..+.+|||+|||.| ..+..|++..+ ..|+++|++|..++
T Consensus 34 ~~~~rVlEVG~G~g~~vA~~La~~~g-~~V~atDInp~Av~ 73 (153)
T 2k4m_A 34 GPGTRVVEVGAGRFLYVSDYIRKHSK-VDLVLTDIKPSHGG 73 (153)
T ss_dssp CSSSEEEEETCTTCCHHHHHHHHHSC-CEEEEECSSCSSTT
T ss_pred CCCCcEEEEccCCChHHHHHHHHhCC-CeEEEEECCccccc
Confidence 34579999999999 58888886333 78999999987655
No 304
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=97.75 E-value=0.00032 Score=56.20 Aligned_cols=119 Identities=14% Similarity=0.118 Sum_probs=79.3
Q ss_pred CCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEEEC
Q psy4592 58 PKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVIITD 137 (197)
Q Consensus 58 ~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~~~ 137 (197)
+.+++|+.||.|+++..+.+.+ ...+.++|+++..++..+.+++.. . .+|+.+........+|+|+.+
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~aG-~~~v~~~e~d~~a~~t~~~N~~~~------~-----~~Di~~~~~~~~~~~D~l~~g 78 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESCG-AECVYSNEWDKYAQEVYEMNFGEK------P-----EGDITQVNEKTIPDHDILCAG 78 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHTT-CEEEEEECCCHHHHHHHHHHHSCC------C-----BSCGGGSCGGGSCCCSEEEEE
T ss_pred CCcEEEECCCcCHHHHHHHHCC-CeEEEEEeCCHHHHHHHHHHcCCC------C-----cCCHHHcCHhhCCCCCEEEEC
Confidence 3689999999999999988774 467899999999999999998631 1 588877544434569999999
Q ss_pred CCCCC-CC--------C--cccccHHHHHHHHhhcCCCcEEEEEcCCCCc--ChhHHHHHHHHHHh
Q psy4592 138 SSDPV-GP--------A--ESLFQASYFELMSRALRPGGIVCSQAGTLWY--SLDCVGNTLQHCAS 190 (197)
Q Consensus 138 ~~~~~-~~--------~--~~l~~~~~~~~~~~~LkpgG~l~~~~~~~~~--~~~~~~~~~~~~~~ 190 (197)
+|... +. + ..|+ .++++ +.+.++|.-+++=|+..... ....++.+++.+++
T Consensus 79 pPCQ~fS~ag~~~g~~d~r~~L~-~~~~r-~i~~~~P~~~~~ENV~gl~~~~~~~~~~~i~~~l~~ 142 (327)
T 2c7p_A 79 FPCQAFSISGKQKGFEDSRGTLF-FDIAR-IVREKKPKVVFMENVKNFASHDNGNTLEVVKNTMNE 142 (327)
T ss_dssp CCCTTTCTTSCCCGGGSTTSCHH-HHHHH-HHHHHCCSEEEEEEEGGGGTGGGGHHHHHHHHHHHH
T ss_pred CCCCCcchhcccCCCcchhhHHH-HHHHH-HHHhccCcEEEEeCcHHHHhccccHHHHHHHHHHHh
Confidence 88532 21 1 1121 23443 44557998666656533211 12456666666654
No 305
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=97.75 E-value=0.00011 Score=59.35 Aligned_cols=121 Identities=16% Similarity=0.148 Sum_probs=75.8
Q ss_pred CCeEEEEeCCchHhHHHHhcCCC-CccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhc--CCceeEE
Q psy4592 58 PKKVLIVGGGDGGVAREVLKHPS-VESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEH--QQEFDVI 134 (197)
Q Consensus 58 ~~~vLdiG~G~G~~~~~l~~~~~-~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~--~~~~D~I 134 (197)
+.+|+|+.||.|+++..+.+.+- ...+.++|+++..++..+.|++. ..++.+|+.+..... ...+|+|
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~~---------~~~~~~Di~~~~~~~~~~~~~D~l 72 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPH---------TQLLAKTIEGITLEEFDRLSFDMI 72 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTT---------SCEECSCGGGCCHHHHHHHCCSEE
T ss_pred CCeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhccc---------cccccCCHHHccHhHcCcCCcCEE
Confidence 45899999999999998877642 25799999999999999998752 346678877643211 1269999
Q ss_pred EECCCCCC-CC---C-------cccccHHHHHHHHhhcC--CCcEEEEEcCCCCcChhHHHHHHHHHHh
Q psy4592 135 ITDSSDPV-GP---A-------ESLFQASYFELMSRALR--PGGIVCSQAGTLWYSLDCVGNTLQHCAS 190 (197)
Q Consensus 135 ~~~~~~~~-~~---~-------~~l~~~~~~~~~~~~Lk--pgG~l~~~~~~~~~~~~~~~~~~~~~~~ 190 (197)
+.++|... +. . ..++ .+++ .+.+.++ |.-+++=|+... .....++.+++.+++
T Consensus 73 ~~gpPCq~fS~ag~~~g~~d~r~~l~-~~~~-~~i~~~~~~P~~~~~ENV~~l-~~~~~~~~i~~~l~~ 138 (343)
T 1g55_A 73 LMSPPCQPFTRIGRQGDMTDSRTNSF-LHIL-DILPRLQKLPKYILLENVKGF-EVSSTRDLLIQTIEN 138 (343)
T ss_dssp EECCC------------------CHH-HHHH-HHGGGCSSCCSEEEEEEETTG-GGSHHHHHHHHHHHH
T ss_pred EEcCCCcchhhcCCcCCccCccchHH-HHHH-HHHHHhcCCCCEEEEeCCccc-cCHHHHHHHHHHHHH
Confidence 99998422 11 0 1111 2233 3445666 876666444332 223556666666654
No 306
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.72 E-value=3.2e-05 Score=61.13 Aligned_cols=46 Identities=20% Similarity=0.086 Sum_probs=40.0
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCC
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPG 103 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~ 103 (197)
.++..|||++||+|..+.++.+.+ .+++++|+++.+++.|++++..
T Consensus 234 ~~~~~vlD~f~GsGt~~~~a~~~g--~~~~g~e~~~~~~~~a~~r~~~ 279 (297)
T 2zig_A 234 FVGDVVLDPFAGTGTTLIAAARWG--RRALGVELVPRYAQLAKERFAR 279 (297)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHcC--CeEEEEeCCHHHHHHHHHHHHH
Confidence 456799999999999999888764 5899999999999999988653
No 307
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=97.53 E-value=0.00011 Score=60.12 Aligned_cols=119 Identities=17% Similarity=0.183 Sum_probs=77.5
Q ss_pred CeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhh-------cCCce
Q psy4592 59 KKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSE-------HQQEF 131 (197)
Q Consensus 59 ~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-------~~~~~ 131 (197)
.+++|+.||.|+++..+.+.+ ...+.++|+++..++..+.|++ +..++++|+.+.... ....+
T Consensus 3 ~~vidLFsG~GGlslG~~~aG-~~~v~avE~d~~a~~t~~~N~~---------~~~~~~~DI~~~~~~~~~~~~~~~~~~ 72 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAG-FDVKMAVEIDQHAINTHAINFP---------RSLHVQEDVSLLNAEIIKGFFKNDMPI 72 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHT-CEEEEEECSCHHHHHHHHHHCT---------TSEEECCCGGGCCHHHHHHHHCSCCCC
T ss_pred CeEEEEccCcCHHHHHHHHCC-CcEEEEEeCCHHHHHHHHHhCC---------CCceEecChhhcCHHHHHhhcccCCCe
Confidence 489999999999998887764 3577899999999999998864 356777887754221 13579
Q ss_pred eEEEECCCCCC-CCC---------cccccHHHHHHHHhhcCCCcEEEEEcCCCCc--ChhHHHHHHHHHHh
Q psy4592 132 DVIITDSSDPV-GPA---------ESLFQASYFELMSRALRPGGIVCSQAGTLWY--SLDCVGNTLQHCAS 190 (197)
Q Consensus 132 D~I~~~~~~~~-~~~---------~~l~~~~~~~~~~~~LkpgG~l~~~~~~~~~--~~~~~~~~~~~~~~ 190 (197)
|+|+.++|+.. +.. ..|+ .+++ .+.+.++|.-+++=|+..... ....++.++ .+.+
T Consensus 73 D~i~ggpPCQ~fS~ag~~~~~d~r~~L~-~~~~-~~v~~~~P~~~v~ENV~gl~s~~~~~~~~~i~-~l~~ 140 (376)
T 3g7u_A 73 DGIIGGPPCQGFSSIGKGNPDDSRNQLY-MHFY-RLVSELQPLFFLAENVPGIMQEKYSGIRNKAF-NLVS 140 (376)
T ss_dssp CEEEECCCCCTTC-------CHHHHHHH-HHHH-HHHHHHCCSEEEEEECTTTTCGGGHHHHHHHH-HHHH
T ss_pred eEEEecCCCCCcccccCCCCCCchHHHH-HHHH-HHHHHhCCCEEEEecchHhhccCcHHHHHHHH-HHHc
Confidence 99999998533 210 1111 2233 344567998777766633221 123455555 5543
No 308
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=97.41 E-value=0.00098 Score=51.50 Aligned_cols=108 Identities=15% Similarity=0.055 Sum_probs=71.4
Q ss_pred CCCCeEEEEeCCchHhHHHHhcC-------CCCccEEEEEc-----CH----------------------HHHH-HH--H
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKH-------PSVESAYLVEI-----DN----------------------RVIE-VS--K 98 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~-------~~~~~v~~ve~-----~~----------------------~~~~-~a--~ 98 (197)
.-+..|+|+|+-.|..+..++.. ....++.++|. .+ +.++ .. +
T Consensus 68 ~vpG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~ 147 (257)
T 3tos_A 68 DVPGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAH 147 (257)
T ss_dssp TSCSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHH
T ss_pred CCCCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHH
Confidence 44679999999999877765431 23468999992 21 0011 11 1
Q ss_pred hhcCCCCCCCCCCCeEEEEcchHHHHhh-----cCCceeEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 99 KYLPGMAVGLSDPRLTVHVGDGFRFMSE-----HQQEFDVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~-----~~~~~D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
.++... +...++++++.|++.+.++. +..++|+|+.|.-. .-.+...++.+...|+|||++++--
T Consensus 148 ~~~~~~--g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~------Y~~t~~~le~~~p~l~~GGvIv~DD 217 (257)
T 3tos_A 148 ECSDFF--GHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDL------YEPTKAVLEAIRPYLTKGSIVAFDE 217 (257)
T ss_dssp HTTSTT--TTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCC------HHHHHHHHHHHGGGEEEEEEEEESS
T ss_pred hhhhhc--CCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCcc------cchHHHHHHHHHHHhCCCcEEEEcC
Confidence 122211 11236899999999988765 24579999999831 1113568999999999999999854
No 309
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=97.26 E-value=0.0013 Score=52.69 Aligned_cols=98 Identities=15% Similarity=0.212 Sum_probs=67.6
Q ss_pred CCCCeEEEEeCCc-hHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEE
Q psy4592 56 PNPKKVLIVGGGD-GGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVI 134 (197)
Q Consensus 56 ~~~~~vLdiG~G~-G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I 134 (197)
..+.+||.+|+|. |.++..+++..+ .++++++.+++-.+.+++.-. ..-+.....|..+.+....+.+|+|
T Consensus 165 ~~g~~VlV~GaG~vG~~a~qla~~~G-a~Vi~~~~~~~~~~~~~~lGa-------~~~i~~~~~~~~~~~~~~~g~~d~v 236 (340)
T 3s2e_A 165 RPGQWVVISGIGGLGHVAVQYARAMG-LRVAAVDIDDAKLNLARRLGA-------EVAVNARDTDPAAWLQKEIGGAHGV 236 (340)
T ss_dssp CTTSEEEEECCSTTHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHTTC-------SEEEETTTSCHHHHHHHHHSSEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCC-CeEEEEeCCHHHHHHHHHcCC-------CEEEeCCCcCHHHHHHHhCCCCCEE
Confidence 5668999999875 777777887665 599999999999998877421 1011111134433333333479999
Q ss_pred EECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 135 ITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 135 ~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
+.+.. ....++.+.+.|+++|.+++..
T Consensus 237 id~~g----------~~~~~~~~~~~l~~~G~iv~~G 263 (340)
T 3s2e_A 237 LVTAV----------SPKAFSQAIGMVRRGGTIALNG 263 (340)
T ss_dssp EESSC----------CHHHHHHHHHHEEEEEEEEECS
T ss_pred EEeCC----------CHHHHHHHHHHhccCCEEEEeC
Confidence 86542 1567889999999999998864
No 310
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=97.24 E-value=0.0035 Score=49.91 Aligned_cols=118 Identities=15% Similarity=0.160 Sum_probs=79.5
Q ss_pred eEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEEECCC
Q psy4592 60 KVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVIITDSS 139 (197)
Q Consensus 60 ~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~~~~~ 139 (197)
+|+|+-||.|++...+.+.+ ...+.++|+++...+..+.|++ -+++.+|+.+.-...-...|+++..+|
T Consensus 2 kvidLFsG~GG~~~G~~~aG-~~~v~a~e~d~~a~~ty~~N~~----------~~~~~~DI~~i~~~~~~~~D~l~ggpP 70 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQKAG-FRIICANEYDKSIWKTYESNHS----------AKLIKGDISKISSDEFPKCDGIIGGPP 70 (331)
T ss_dssp EEEEESCTTCHHHHHHHHTT-CEEEEEEECCTTTHHHHHHHCC----------SEEEESCGGGCCGGGSCCCSEEECCCC
T ss_pred eEEEeCcCccHHHHHHHHCC-CEEEEEEeCCHHHHHHHHHHCC----------CCcccCChhhCCHhhCCcccEEEecCC
Confidence 79999999999998887764 4678899999999999998864 256789988754444567999999987
Q ss_pred CCC-C--------CC--cccccHHHHHHHHhhcCCCcEEEEEcCCCC--cChhHHHHHHHHHHh
Q psy4592 140 DPV-G--------PA--ESLFQASYFELMSRALRPGGIVCSQAGTLW--YSLDCVGNTLQHCAS 190 (197)
Q Consensus 140 ~~~-~--------~~--~~l~~~~~~~~~~~~LkpgG~l~~~~~~~~--~~~~~~~~~~~~~~~ 190 (197)
... + .+ ..|+ .+++ .+.+.++|.-+++=|+.... .....++.+++.+.+
T Consensus 71 CQ~fS~ag~~~g~~d~R~~L~-~~~~-r~i~~~~Pk~~~~ENV~gl~~~~~~~~~~~i~~~l~~ 132 (331)
T 3ubt_Y 71 SQSWSEGGSLRGIDDPRGKLF-YEYI-RILKQKKPIFFLAENVKGMMAQRHNKAVQEFIQEFDN 132 (331)
T ss_dssp GGGTEETTEECCTTCGGGHHH-HHHH-HHHHHHCCSEEEEEECCGGGGCTTSHHHHHHHHHHHH
T ss_pred CCCcCCCCCccCCCCchhHHH-HHHH-HHHhccCCeEEEeeeecccccccccchhhhhhhhhcc
Confidence 522 1 11 1121 2233 34566799876665553211 123566666666654
No 311
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.23 E-value=0.00044 Score=54.53 Aligned_cols=63 Identities=21% Similarity=0.280 Sum_probs=45.2
Q ss_pred CCeEEEEcchHHHHhh-cCCceeEEEECCCCCCCCCc-----cc--------c---cHHHHHHHHhhcCCCcEEEEEcCC
Q psy4592 111 PRLTVHVGDGFRFMSE-HQQEFDVIITDSSDPVGPAE-----SL--------F---QASYFELMSRALRPGGIVCSQAGT 173 (197)
Q Consensus 111 ~~~~~~~~d~~~~~~~-~~~~~D~I~~~~~~~~~~~~-----~l--------~---~~~~~~~~~~~LkpgG~l~~~~~~ 173 (197)
.+++++++|+.+.++. .+++||+|++|||....... .+ + -..+++++.++|||||.+++....
T Consensus 20 ~~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~d 99 (297)
T 2zig_A 20 GVHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVVGD 99 (297)
T ss_dssp -CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred cCCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEECC
Confidence 4678999999997764 35789999999997432110 00 0 134677899999999999998654
No 312
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=97.19 E-value=0.0013 Score=52.46 Aligned_cols=65 Identities=12% Similarity=0.319 Sum_probs=48.5
Q ss_pred CCCeEEEEcchHHHHhh-cCCceeEEEECCCCCCCCCc---c-------cccHHHHHHHHhhcCCCcEEEEEcCCC
Q psy4592 110 DPRLTVHVGDGFRFMSE-HQQEFDVIITDSSDPVGPAE---S-------LFQASYFELMSRALRPGGIVCSQAGTL 174 (197)
Q Consensus 110 ~~~~~~~~~d~~~~~~~-~~~~~D~I~~~~~~~~~~~~---~-------l~~~~~~~~~~~~LkpgG~l~~~~~~~ 174 (197)
..+..++++|+.+.+.. ..+++|+|++|||....... . ......+++++++|+|||.+++.....
T Consensus 12 ~~~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d~ 87 (323)
T 1boo_A 12 TSNGSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGGA 87 (323)
T ss_dssp CSSEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCC
T ss_pred cCCceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEECCE
Confidence 45788999999887764 35789999999997543210 0 012567888999999999999987554
No 313
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=97.17 E-value=0.0016 Score=52.73 Aligned_cols=99 Identities=14% Similarity=0.108 Sum_probs=65.7
Q ss_pred CCCCeEEEEeCCc-hHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhh-cCCceeE
Q psy4592 56 PNPKKVLIVGGGD-GGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSE-HQQEFDV 133 (197)
Q Consensus 56 ~~~~~vLdiG~G~-G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~~~D~ 133 (197)
..+.+||.+|+|. |.++..+++..+...|++++.+++-.+.+++.-. ..-+.....|..+.+.. ..+.+|+
T Consensus 189 ~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa-------~~vi~~~~~~~~~~~~~~~~gg~D~ 261 (371)
T 1f8f_A 189 TPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGA-------THVINSKTQDPVAAIKEITDGGVNF 261 (371)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTC-------SEEEETTTSCHHHHHHHHTTSCEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCC-------CEEecCCccCHHHHHHHhcCCCCcE
Confidence 5568999999875 6666777776553479999999999998876421 10111111233333332 2337999
Q ss_pred EEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 134 IITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 134 I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
|+.... ....++.+.+.|+++|.+++..
T Consensus 262 vid~~g----------~~~~~~~~~~~l~~~G~iv~~G 289 (371)
T 1f8f_A 262 ALESTG----------SPEILKQGVDALGILGKIAVVG 289 (371)
T ss_dssp EEECSC----------CHHHHHHHHHTEEEEEEEEECC
T ss_pred EEECCC----------CHHHHHHHHHHHhcCCEEEEeC
Confidence 985542 1457788999999999998864
No 314
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=97.15 E-value=0.00049 Score=53.23 Aligned_cols=46 Identities=15% Similarity=0.013 Sum_probs=40.2
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCC
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPG 103 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~ 103 (197)
.++..|||..||+|..+.++.+.+ .+++++|+++..++.+++++..
T Consensus 211 ~~~~~vlD~f~GsGtt~~~a~~~g--r~~ig~e~~~~~~~~~~~r~~~ 256 (260)
T 1g60_A 211 NPNDLVLDCFMGSGTTAIVAKKLG--RNFIGCDMNAEYVNQANFVLNQ 256 (260)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHC
T ss_pred CCCCEEEECCCCCCHHHHHHHHcC--CeEEEEeCCHHHHHHHHHHHHh
Confidence 566799999999999998887764 6899999999999999998753
No 315
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=97.12 E-value=0.002 Score=54.30 Aligned_cols=124 Identities=18% Similarity=0.122 Sum_probs=81.0
Q ss_pred CCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHh------------
Q psy4592 58 PKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMS------------ 125 (197)
Q Consensus 58 ~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~------------ 125 (197)
..+++|+.||.|++...+.+.+ ...+.++|+++...+..+.|+.. .+...++.+|+.+...
T Consensus 88 ~~~viDLFaG~GGlslG~~~aG-~~~v~avE~d~~A~~ty~~N~~~------~p~~~~~~~DI~~i~~~~~~~~~~~~~~ 160 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESIG-GQCVFTSEWNKHAVRTYKANHYC------DPATHHFNEDIRDITLSHQEGVSDEAAA 160 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTTT-EEEEEEECCCHHHHHHHHHHSCC------CTTTCEEESCTHHHHCTTCTTSCHHHHH
T ss_pred cceEEEecCCccHHHHHHHHCC-CEEEEEEeCCHHHHHHHHHhccc------CCCcceeccchhhhhhccccccchhhHH
Confidence 3589999999999998887764 35689999999999999988742 2355677899987652
Q ss_pred ----hcCCceeEEEECCCCCC-CCC-------------------cccccHHHHHHHHhhcCCCcEEEEEcCCCCc--Chh
Q psy4592 126 ----EHQQEFDVIITDSSDPV-GPA-------------------ESLFQASYFELMSRALRPGGIVCSQAGTLWY--SLD 179 (197)
Q Consensus 126 ----~~~~~~D~I~~~~~~~~-~~~-------------------~~l~~~~~~~~~~~~LkpgG~l~~~~~~~~~--~~~ 179 (197)
.....+|+|+..+|+.. +.. ..|+ .+++ .+.+.++|.-+++=|+..... ...
T Consensus 161 ~~i~~~~~~~Dvl~gGpPCQ~FS~AG~~k~~~~g~~~G~~~D~R~~Lf-~e~~-riI~~~rPk~fvlENV~gl~s~~~g~ 238 (482)
T 3me5_A 161 EHIRQHIPEHDVLLAGFPCQPFSLAGVSKKNSLGRAHGFACDTQGTLF-FDVV-RIIDARRPAMFVLENVKNLKSHDKGK 238 (482)
T ss_dssp HHHHHHSCCCSEEEEECCCCCC------------------CTTTTSHH-HHHH-HHHHHHCCSEEEEEEETTTTTGGGGH
T ss_pred hhhhhcCCCCCEEEecCCCcchhhhCcccccccccccccccCccccHH-HHHH-HHHHHcCCcEEEEeCcHHHhcccCCc
Confidence 12356899999987532 211 0111 2222 234556898776666643221 234
Q ss_pred HHHHHHHHHHh
Q psy4592 180 CVGNTLQHCAS 190 (197)
Q Consensus 180 ~~~~~~~~~~~ 190 (197)
.++.+++.|.+
T Consensus 239 ~f~~i~~~L~~ 249 (482)
T 3me5_A 239 TFRIIMQTLDE 249 (482)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhc
Confidence 56666666654
No 316
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=97.09 E-value=0.0031 Score=50.63 Aligned_cols=120 Identities=14% Similarity=0.096 Sum_probs=75.7
Q ss_pred CeEEEEeCCchHhHHHHhcCCC-CccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhh--cCCceeEEE
Q psy4592 59 KKVLIVGGGDGGVAREVLKHPS-VESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSE--HQQEFDVII 135 (197)
Q Consensus 59 ~~vLdiG~G~G~~~~~l~~~~~-~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~--~~~~~D~I~ 135 (197)
.+++|+.||.|++...+.+.+- ...+.++|+++...+..+.|++. ..++.+|+.+.... ....+|+++
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~~---------~~~~~~DI~~~~~~~~~~~~~D~l~ 74 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFPE---------TNLLNRNIQQLTPQVIKKWNVDTIL 74 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTT---------SCEECCCGGGCCHHHHHHTTCCEEE
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCCC---------CceeccccccCCHHHhccCCCCEEE
Confidence 4899999999999988876532 25688999999999999998753 23556777654222 123699999
Q ss_pred ECCCCCC-C----------CCcccccHHHHHHHHhhcC-CCcEEEEEcCCCCcChhHHHHHHHHHHh
Q psy4592 136 TDSSDPV-G----------PAESLFQASYFELMSRALR-PGGIVCSQAGTLWYSLDCVGNTLQHCAS 190 (197)
Q Consensus 136 ~~~~~~~-~----------~~~~l~~~~~~~~~~~~Lk-pgG~l~~~~~~~~~~~~~~~~~~~~~~~ 190 (197)
..+|... + +...++ .+++ .+.+.++ |.-+++=|+... .....++.+.+.+++
T Consensus 75 ggpPCQ~fS~ag~~~~~~d~r~~L~-~~~~-r~i~~~~~P~~~vlENV~gl-~~~~~~~~i~~~l~~ 138 (333)
T 4h0n_A 75 MSPPCQPFTRNGKYLDDNDPRTNSF-LYLI-GILDQLDNVDYILMENVKGF-ENSTVRNLFIDKLKE 138 (333)
T ss_dssp ECCCCCCSEETTEECCTTCTTSCCH-HHHH-HHGGGCTTCCEEEEEECTTG-GGSHHHHHHHHHHHH
T ss_pred ecCCCcchhhhhhccCCcCcccccH-HHHH-HHHHHhcCCCEEEEecchhh-hhhhHHHHHHHHHHh
Confidence 9988532 1 111222 2333 3445555 876666555332 223445666666654
No 317
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=97.06 E-value=0.003 Score=50.55 Aligned_cols=123 Identities=11% Similarity=0.092 Sum_probs=74.5
Q ss_pred CCCeEEEEeCCchHhHHHHhcCC-CCccE-EEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhh--cCCcee
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKHP-SVESA-YLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSE--HQQEFD 132 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~~-~~~~v-~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~--~~~~~D 132 (197)
.+.+++|+.||.|++...+.+.+ +...+ .++|+++...+..+.|++.. ++.+|+.+.... ....+|
T Consensus 9 ~~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~~----------~~~~DI~~~~~~~i~~~~~D 78 (327)
T 3qv2_A 9 KQVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKEE----------VQVKNLDSISIKQIESLNCN 78 (327)
T ss_dssp CCEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCCC----------CBCCCTTTCCHHHHHHTCCC
T ss_pred CCCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCCC----------cccCChhhcCHHHhccCCCC
Confidence 45699999999999998887764 22456 79999999999999998531 344565543211 113699
Q ss_pred EEEECCCC-CC--C---CCcccc--cHHHHHHHHh----hc--CCCcEEEEEcCCCCcChhHHHHHHHHHHh
Q psy4592 133 VIITDSSD-PV--G---PAESLF--QASYFELMSR----AL--RPGGIVCSQAGTLWYSLDCVGNTLQHCAS 190 (197)
Q Consensus 133 ~I~~~~~~-~~--~---~~~~l~--~~~~~~~~~~----~L--kpgG~l~~~~~~~~~~~~~~~~~~~~~~~ 190 (197)
+++..+|. +. + ...... ...++.++.+ .+ +|.-+++=|+... .....++.+.+.+++
T Consensus 79 il~ggpPCQ~fs~S~ag~~~~~~d~r~~L~~~~~r~~i~~~~~~P~~~~lENV~gl-~~~~~~~~i~~~l~~ 149 (327)
T 3qv2_A 79 TWFMSPPCQPYNNSIMSKHKDINDPRAKSVLHLYRDILPYLINKPKHIFIENVPLF-KESLVFKEIYNILIK 149 (327)
T ss_dssp EEEECCCCTTCSHHHHTTTCTTTCGGGHHHHHHHHTTGGGCSSCCSEEEEEECGGG-GGSHHHHHHHHHHHH
T ss_pred EEEecCCccCcccccCCCCCCCccccchhHHHHHHHHHHHhccCCCEEEEEchhhh-cChHHHHHHHHHHHh
Confidence 99999885 33 1 110111 1234444444 45 6765555544222 123456666666654
No 318
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=97.05 E-value=0.00077 Score=47.69 Aligned_cols=113 Identities=16% Similarity=0.182 Sum_probs=73.1
Q ss_pred HHHhhcccCCCCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHh
Q psy4592 46 MIAFLPLCSHPNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMS 125 (197)
Q Consensus 46 ~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 125 (197)
.+.+.......-+.-|||+|.|+|..-..+.+..+...|.++|-.-..- +. . -++.-.++.||+++.++
T Consensus 29 ~L~~a~~~v~~~~GpVlElGLGNGRTydHLRe~~P~R~I~vfDR~~~~h-------p~---~-~P~~e~~ilGdi~~tL~ 97 (174)
T 3iht_A 29 CLEHAIAQTAGLSGPVYELGLGNGRTYHHLRQHVQGREIYVFERAVASH-------PD---S-TPPEAQLILGDIRETLP 97 (174)
T ss_dssp HHHHHHHHTTTCCSCEEEECCTTCHHHHHHHHHCCSSCEEEEESSCCCC-------GG---G-CCCGGGEEESCHHHHHH
T ss_pred HHHHHHHHhcCCCCceEEecCCCChhHHHHHHhCCCCcEEEEEeeeccC-------CC---C-CCchHheecccHHHHHH
Confidence 3333333333445689999999999888888888888999999632110 10 0 23456789999999887
Q ss_pred hc----CCceeEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEE
Q psy4592 126 EH----QQEFDVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCS 169 (197)
Q Consensus 126 ~~----~~~~D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~ 169 (197)
.. ..+.-++..|.-.+...........+-..+..+|.|||.++-
T Consensus 98 ~~~~r~g~~a~LaHaD~G~g~~~~d~a~a~~lsplI~~~la~GGi~vS 145 (174)
T 3iht_A 98 ATLERFGATASLVHADLGGHNREKNDRFARLISPLIEPHLAQGGLMVS 145 (174)
T ss_dssp HHHHHHCSCEEEEEECCCCSCHHHHHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred HHHHhcCCceEEEEeecCCCCcchhHHHHHhhhHHHHHHhcCCcEEEe
Confidence 63 567778888875433221111112233456789999999885
No 319
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=97.02 E-value=0.0033 Score=50.63 Aligned_cols=97 Identities=19% Similarity=0.134 Sum_probs=64.3
Q ss_pred CCCCCeEEEEeCCc-hHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEc------chHHHHhh-
Q psy4592 55 HPNPKKVLIVGGGD-GGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVG------DGFRFMSE- 126 (197)
Q Consensus 55 ~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~------d~~~~~~~- 126 (197)
...+.+||.+|+|. |.++..+++..+..++++++.+++-.+.+++. .. . .++.. |..+.+..
T Consensus 169 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-Ga--------~-~vi~~~~~~~~~~~~~i~~~ 238 (356)
T 1pl8_A 169 VTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEI-GA--------D-LVLQISKESPQEIARKVEGQ 238 (356)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT-TC--------S-EEEECSSCCHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-CC--------C-EEEcCcccccchHHHHHHHH
Confidence 35668999999875 66667777765534899999999988888763 11 1 12221 21122221
Q ss_pred cCCceeEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 127 HQQEFDVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 127 ~~~~~D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
....+|+|+.... ....++.+.+.|+++|.+++..
T Consensus 239 ~~~g~D~vid~~g----------~~~~~~~~~~~l~~~G~iv~~G 273 (356)
T 1pl8_A 239 LGCKPEVTIECTG----------AEASIQAGIYATRSGGTLVLVG 273 (356)
T ss_dssp HTSCCSEEEECSC----------CHHHHHHHHHHSCTTCEEEECS
T ss_pred hCCCCCEEEECCC----------ChHHHHHHHHHhcCCCEEEEEe
Confidence 2256999986542 1446788899999999998864
No 320
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=97.01 E-value=0.008 Score=48.41 Aligned_cols=99 Identities=20% Similarity=0.168 Sum_probs=67.3
Q ss_pred CCCCCeEEEEeCCc-hHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEE-----cchHHHHhh-c
Q psy4592 55 HPNPKKVLIVGGGD-GGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHV-----GDGFRFMSE-H 127 (197)
Q Consensus 55 ~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~-----~d~~~~~~~-~ 127 (197)
...+.+||.+|+|. |.++..+++..+...|++++.+++-.+.+++. .. ..+.+.. .|..+.+.. .
T Consensus 177 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~~-------~~~~~~~~~~~~~~~~~~v~~~t 248 (363)
T 3m6i_A 177 VRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-CP-------EVVTHKVERLSAEESAKKIVESF 248 (363)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-CT-------TCEEEECCSCCHHHHHHHHHHHT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-ch-------hcccccccccchHHHHHHHHHHh
Confidence 35678999999864 56667777766644599999999999999886 31 1233321 222222322 1
Q ss_pred -CCceeEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 128 -QQEFDVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 128 -~~~~D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
...+|+|+-... .+..++.+.+.|+++|.+++..
T Consensus 249 ~g~g~Dvvid~~g----------~~~~~~~~~~~l~~~G~iv~~G 283 (363)
T 3m6i_A 249 GGIEPAVALECTG----------VESSIAAAIWAVKFGGKVFVIG 283 (363)
T ss_dssp SSCCCSEEEECSC----------CHHHHHHHHHHSCTTCEEEECC
T ss_pred CCCCCCEEEECCC----------ChHHHHHHHHHhcCCCEEEEEc
Confidence 357999986442 1457788999999999999864
No 321
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=97.00 E-value=0.0012 Score=52.20 Aligned_cols=76 Identities=20% Similarity=0.090 Sum_probs=56.5
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCcc-EEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhc---CCce
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVES-AYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEH---QQEF 131 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~-v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~---~~~~ 131 (197)
+.+.+++|+.||.|++...+.+.+-... +.++|+++...+..+.+++ ...++.+|+.+..... .+.+
T Consensus 14 ~~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~~---------~~~~~~~DI~~i~~~~i~~~~~~ 84 (295)
T 2qrv_A 14 RKPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRHQ---------GKIMYVGDVRSVTQKHIQEWGPF 84 (295)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHHTT---------TCEEEECCGGGCCHHHHHHTCCC
T ss_pred CCCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHhCC---------CCceeCCChHHccHHHhcccCCc
Confidence 4556999999999999988877642222 6899999999998888764 2356778887643221 2479
Q ss_pred eEEEECCCC
Q psy4592 132 DVIITDSSD 140 (197)
Q Consensus 132 D~I~~~~~~ 140 (197)
|+|+..+|.
T Consensus 85 Dll~ggpPC 93 (295)
T 2qrv_A 85 DLVIGGSPC 93 (295)
T ss_dssp SEEEECCCC
T ss_pred CEEEecCCC
Confidence 999999875
No 322
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=96.97 E-value=0.0019 Score=51.57 Aligned_cols=63 Identities=19% Similarity=0.241 Sum_probs=46.4
Q ss_pred CeEEE-EcchHHHHhh-cCCceeEEEECCCCCCCCC------cc-cccHHHHHHHHhhcCCCcEEEEEcCCC
Q psy4592 112 RLTVH-VGDGFRFMSE-HQQEFDVIITDSSDPVGPA------ES-LFQASYFELMSRALRPGGIVCSQAGTL 174 (197)
Q Consensus 112 ~~~~~-~~d~~~~~~~-~~~~~D~I~~~~~~~~~~~------~~-l~~~~~~~~~~~~LkpgG~l~~~~~~~ 174 (197)
...++ ++|+.+.+.. ..+++|+|+.|||.....+ .. -+....+.++.++|+|+|.+++.....
T Consensus 38 ~~~l~i~gD~l~~L~~l~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~~~~~ 109 (319)
T 1eg2_A 38 TRHVYDVCDCLDTLAKLPDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFGGLQ 109 (319)
T ss_dssp EEEEEEECCHHHHHHTSCTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEECSC
T ss_pred cceEEECCcHHHHHHhCccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEEcCcc
Confidence 46788 9999988875 3568999999999755411 10 012567788899999999999987543
No 323
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=96.95 E-value=0.0026 Score=51.09 Aligned_cols=100 Identities=13% Similarity=0.194 Sum_probs=66.2
Q ss_pred CCCCCeEEEEeCCc-hHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhh-c-CCce
Q psy4592 55 HPNPKKVLIVGGGD-GGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSE-H-QQEF 131 (197)
Q Consensus 55 ~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~-~~~~ 131 (197)
..++.+||.+|+|. |.++..+++..+..+|++++.+++-++.+++.-. ..-+.....|..+.+.. . ...+
T Consensus 164 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa-------~~vi~~~~~~~~~~v~~~t~g~g~ 236 (352)
T 3fpc_A 164 IKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGA-------TDIINYKNGDIVEQILKATDGKGV 236 (352)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTC-------CEEECGGGSCHHHHHHHHTTTCCE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCC-------ceEEcCCCcCHHHHHHHHcCCCCC
Confidence 35678999999875 6666777777664489999999998898887521 10111112344443333 2 3369
Q ss_pred eEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 132 DVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 132 D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
|+|+.... . ...++.+.+.|+++|.+++..
T Consensus 237 D~v~d~~g-----~-----~~~~~~~~~~l~~~G~~v~~G 266 (352)
T 3fpc_A 237 DKVVIAGG-----D-----VHTFAQAVKMIKPGSDIGNVN 266 (352)
T ss_dssp EEEEECSS-----C-----TTHHHHHHHHEEEEEEEEECC
T ss_pred CEEEECCC-----C-----hHHHHHHHHHHhcCCEEEEec
Confidence 99985432 1 236788899999999998764
No 324
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=96.88 E-value=0.0016 Score=50.26 Aligned_cols=60 Identities=12% Similarity=0.229 Sum_probs=44.4
Q ss_pred CeEEEEcchHHHHhh-cCCceeEEEECCCCCCC-CCcc-c--------ccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 112 RLTVHVGDGFRFMSE-HQQEFDVIITDSSDPVG-PAES-L--------FQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 112 ~~~~~~~d~~~~~~~-~~~~~D~I~~~~~~~~~-~~~~-l--------~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
..+++++|+.+.+.. ..+++|+|+.|||.... .... . +....++.+.++|+|+|.+++..
T Consensus 4 ~~~l~~gD~~~~l~~l~~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~~ 74 (260)
T 1g60_A 4 INKIHQMNCFDFLDQVENKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIFN 74 (260)
T ss_dssp SSSEEECCHHHHHHHSCTTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCeEEechHHHHHHhccccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEEc
Confidence 346889999888776 35689999999997544 1110 0 22567788899999999999864
No 325
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=96.83 E-value=0.004 Score=50.50 Aligned_cols=99 Identities=17% Similarity=0.214 Sum_probs=66.9
Q ss_pred CCCCeEEEEeCCc-hHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhh----cCCc
Q psy4592 56 PNPKKVLIVGGGD-GGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSE----HQQE 130 (197)
Q Consensus 56 ~~~~~vLdiG~G~-G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~----~~~~ 130 (197)
+.+.+||.+|+|. |.++..+++..+..++++++.+++-.+.+++.-. ..-+.+...|..+.+.. ..+.
T Consensus 181 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa-------~~vi~~~~~~~~~~i~~~~~~~~gg 253 (370)
T 4ej6_A 181 KAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGA-------TATVDPSAGDVVEAIAGPVGLVPGG 253 (370)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTC-------SEEECTTSSCHHHHHHSTTSSSTTC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCC-------CEEECCCCcCHHHHHHhhhhccCCC
Confidence 5678999999864 5566667776654489999999999998887421 10111112344444432 2347
Q ss_pred eeEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 131 FDVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 131 ~D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
+|+|+-... ....++.+.+.|+++|.+++..
T Consensus 254 ~Dvvid~~G----------~~~~~~~~~~~l~~~G~vv~~G 284 (370)
T 4ej6_A 254 VDVVIECAG----------VAETVKQSTRLAKAGGTVVILG 284 (370)
T ss_dssp EEEEEECSC----------CHHHHHHHHHHEEEEEEEEECS
T ss_pred CCEEEECCC----------CHHHHHHHHHHhccCCEEEEEe
Confidence 999985431 1457889999999999998865
No 326
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=96.79 E-value=8.6e-05 Score=73.52 Aligned_cols=103 Identities=16% Similarity=0.120 Sum_probs=49.0
Q ss_pred CCeEEEEeCCchHhHHHHhcCCC-----CccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCcee
Q psy4592 58 PKKVLIVGGGDGGVAREVLKHPS-----VESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFD 132 (197)
Q Consensus 58 ~~~vLdiG~G~G~~~~~l~~~~~-----~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D 132 (197)
..+||+||.|+|..+..+..... ..+++..|+++...+.+++.+..+ +++...-|..+........||
T Consensus 1241 ~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~-------di~~~~~d~~~~~~~~~~~yd 1313 (2512)
T 2vz8_A 1241 KMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQL-------HVTQGQWDPANPAPGSLGKAD 1313 (2512)
T ss_dssp EEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHH-------TEEEECCCSSCCCC-----CC
T ss_pred CceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhc-------ccccccccccccccCCCCcee
Confidence 36999999999987655443211 247889999998887777665321 122111121100000134699
Q ss_pred EEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 133 VIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 133 ~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
+|++....|..++. .+.+++++++|||||++++..
T Consensus 1314 lvia~~vl~~t~~~----~~~l~~~~~lL~p~G~l~~~e 1348 (2512)
T 2vz8_A 1314 LLVCNCALATLGDP----AVAVGNMAATLKEGGFLLLHT 1348 (2512)
T ss_dssp EEEEECC------------------------CCEEEEEE
T ss_pred EEEEcccccccccH----HHHHHHHHHhcCCCcEEEEEe
Confidence 99987766654433 567899999999999988754
No 327
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=96.73 E-value=0.0052 Score=49.14 Aligned_cols=98 Identities=13% Similarity=0.199 Sum_probs=65.6
Q ss_pred CCCCeEEEEeCCc-hHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhh-c-CCcee
Q psy4592 56 PNPKKVLIVGGGD-GGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSE-H-QQEFD 132 (197)
Q Consensus 56 ~~~~~vLdiG~G~-G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~-~~~~D 132 (197)
..+.+||.+|+|. |.++..+++..+..+++++|.+++-.+.+++.-. ..-+.. ..|..+.+.. . ...+|
T Consensus 170 ~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa-------~~~i~~-~~~~~~~v~~~t~g~g~d 241 (345)
T 3jv7_A 170 GPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGA-------DAAVKS-GAGAADAIRELTGGQGAT 241 (345)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTC-------SEEEEC-STTHHHHHHHHHGGGCEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCC-------CEEEcC-CCcHHHHHHHHhCCCCCe
Confidence 5668999999865 5666667765544799999999999999877421 111111 1133332322 1 24799
Q ss_pred EEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 133 VIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 133 ~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
+|+-... .+..++.+.+.|+++|.+++..
T Consensus 242 ~v~d~~G----------~~~~~~~~~~~l~~~G~iv~~G 270 (345)
T 3jv7_A 242 AVFDFVG----------AQSTIDTAQQVVAVDGHISVVG 270 (345)
T ss_dssp EEEESSC----------CHHHHHHHHHHEEEEEEEEECS
T ss_pred EEEECCC----------CHHHHHHHHHHHhcCCEEEEEC
Confidence 9986542 1457889999999999999864
No 328
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=96.73 E-value=0.0042 Score=50.81 Aligned_cols=108 Identities=10% Similarity=0.079 Sum_probs=66.1
Q ss_pred CCCCeEEEEeCCc-hHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcch-HHHHhh-c-CCce
Q psy4592 56 PNPKKVLIVGGGD-GGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDG-FRFMSE-H-QQEF 131 (197)
Q Consensus 56 ~~~~~vLdiG~G~-G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~-~~~~~~-~-~~~~ 131 (197)
..+.+||.+|+|. |.++..+++..+..+|++++.+++-++.+++. . ...+.+...|. .+.+.. . ...+
T Consensus 184 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-G-------a~~i~~~~~~~~~~~~~~~~~g~g~ 255 (398)
T 2dph_A 184 KPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDA-G-------FETIDLRNSAPLRDQIDQILGKPEV 255 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTT-T-------CEEEETTSSSCHHHHHHHHHSSSCE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHc-C-------CcEEcCCCcchHHHHHHHHhCCCCC
Confidence 5668999999876 66777777765534899999999998888753 1 11111111232 232322 2 2369
Q ss_pred eEEEECCCCCCCCC----cccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 132 DVIITDSSDPVGPA----ESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 132 D~I~~~~~~~~~~~----~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
|+|+-......... .+......++.+.+.|+++|.+++..
T Consensus 256 Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G 299 (398)
T 2dph_A 256 DCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPG 299 (398)
T ss_dssp EEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCS
T ss_pred CEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEec
Confidence 99987653221000 00011346788999999999998754
No 329
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=96.72 E-value=0.0076 Score=48.86 Aligned_cols=99 Identities=16% Similarity=0.124 Sum_probs=65.4
Q ss_pred CCCCeEEEEeCCc-hHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEE--EcchHHHHhh-cCCce
Q psy4592 56 PNPKKVLIVGGGD-GGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVH--VGDGFRFMSE-HQQEF 131 (197)
Q Consensus 56 ~~~~~vLdiG~G~-G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~--~~d~~~~~~~-~~~~~ 131 (197)
+.+.+||.+|+|. |.++..+++..+..+|+++|.+++-++.+++. .. ..-+... ..|..+.+.. ..+.+
T Consensus 192 ~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~l-Ga------~~vi~~~~~~~~~~~~i~~~~~gg~ 264 (378)
T 3uko_A 192 EPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKF-GV------NEFVNPKDHDKPIQEVIVDLTDGGV 264 (378)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTT-TC------CEEECGGGCSSCHHHHHHHHTTSCB
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHc-CC------cEEEccccCchhHHHHHHHhcCCCC
Confidence 5668999999863 56666677765544899999999999988763 11 1001111 1233333333 33489
Q ss_pred eEEEECCCCCCCCCcccccHHHHHHHHhhcCCC-cEEEEEc
Q psy4592 132 DVIITDSSDPVGPAESLFQASYFELMSRALRPG-GIVCSQA 171 (197)
Q Consensus 132 D~I~~~~~~~~~~~~~l~~~~~~~~~~~~Lkpg-G~l~~~~ 171 (197)
|+|+-... ....++.+.+.|+++ |.+++..
T Consensus 265 D~vid~~g----------~~~~~~~~~~~l~~g~G~iv~~G 295 (378)
T 3uko_A 265 DYSFECIG----------NVSVMRAALECCHKGWGTSVIVG 295 (378)
T ss_dssp SEEEECSC----------CHHHHHHHHHTBCTTTCEEEECS
T ss_pred CEEEECCC----------CHHHHHHHHHHhhccCCEEEEEc
Confidence 99986542 145788999999997 9998865
No 330
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=96.63 E-value=0.011 Score=47.12 Aligned_cols=100 Identities=18% Similarity=0.141 Sum_probs=66.8
Q ss_pred CCCCCeEEEEeCCchH-hHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhc--CCce
Q psy4592 55 HPNPKKVLIVGGGDGG-VAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEH--QQEF 131 (197)
Q Consensus 55 ~~~~~~vLdiG~G~G~-~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~--~~~~ 131 (197)
.+++.+||.+|+|.++ ++..+++.....+|++++.+++-.+.+++.-. ..-+.....|..+.+... ...+
T Consensus 161 ~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga-------~~~i~~~~~~~~~~v~~~t~g~g~ 233 (348)
T 4eez_A 161 VKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGA-------DVTINSGDVNPVDEIKKITGGLGV 233 (348)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTC-------SEEEEC-CCCHHHHHHHHTTSSCE
T ss_pred CCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCC-------eEEEeCCCCCHHHHhhhhcCCCCc
Confidence 3566899999998654 44445554445799999999998888877532 112333444555444432 3357
Q ss_pred eEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 132 DVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 132 D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
|.++.+.. ....+..+.+.|+++|.+++..
T Consensus 234 d~~~~~~~----------~~~~~~~~~~~l~~~G~~v~~g 263 (348)
T 4eez_A 234 QSAIVCAV----------ARIAFEQAVASLKPMGKMVAVA 263 (348)
T ss_dssp EEEEECCS----------CHHHHHHHHHTEEEEEEEEECC
T ss_pred eEEEEecc----------CcchhheeheeecCCceEEEEe
Confidence 87776542 1567788999999999988765
No 331
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=96.60 E-value=0.0011 Score=53.05 Aligned_cols=63 Identities=10% Similarity=-0.031 Sum_probs=48.9
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHh
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMS 125 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 125 (197)
.++..|||..||+|..+.++.+.+ .+.+++|+++...+.+++++... ....+.++.|+.+...
T Consensus 251 ~~~~~VlDpF~GsGtt~~aa~~~g--r~~ig~e~~~~~~~~~~~r~~~~-----~~~~~~~~~~~~~i~~ 313 (323)
T 1boo_A 251 EPDDLVVDIFGGSNTTGLVAERES--RKWISFEMKPEYVAASAFRFLDN-----NISEEKITDIYNRILN 313 (323)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHTT--CEEEEEESCHHHHHHHHGGGSCS-----CSCHHHHHHHHHHHHT
T ss_pred CCCCEEEECCCCCCHHHHHHHHcC--CCEEEEeCCHHHHHHHHHHHHhc-----ccchHHHHHHHHHHHc
Confidence 456799999999999988877764 68999999999999999998752 2345556666665443
No 332
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=96.59 E-value=0.012 Score=47.21 Aligned_cols=98 Identities=21% Similarity=0.155 Sum_probs=63.0
Q ss_pred CCCCeEEEEeCCc-hHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEE-cchHHHHhh-c----C
Q psy4592 56 PNPKKVLIVGGGD-GGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHV-GDGFRFMSE-H----Q 128 (197)
Q Consensus 56 ~~~~~vLdiG~G~-G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~-~d~~~~~~~-~----~ 128 (197)
.++.+||.+|+|. |.++..+++..+ .+|++++.+++-.+.+++.-. ..-+.... .|..+.+.. . .
T Consensus 167 ~~g~~VlV~GaG~vG~~a~qla~~~G-a~Vi~~~~~~~~~~~~~~lGa-------~~~~~~~~~~~~~~~i~~~~~~~~g 238 (352)
T 1e3j_A 167 QLGTTVLVIGAGPIGLVSVLAAKAYG-AFVVCTARSPRRLEVAKNCGA-------DVTLVVDPAKEEESSIIERIRSAIG 238 (352)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHTTC-------SEEEECCTTTSCHHHHHHHHHHHSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcC-CEEEEEcCCHHHHHHHHHhCC-------CEEEcCcccccHHHHHHHHhccccC
Confidence 5668999999864 556666776555 569999999999898876311 10111110 222222222 1 2
Q ss_pred CceeEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 129 QEFDVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 129 ~~~D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
..+|+|+.... . ...++.+.+.|+++|.+++..
T Consensus 239 ~g~D~vid~~g-----~-----~~~~~~~~~~l~~~G~iv~~G 271 (352)
T 1e3j_A 239 DLPNVTIDCSG-----N-----EKCITIGINITRTGGTLMLVG 271 (352)
T ss_dssp SCCSEEEECSC-----C-----HHHHHHHHHHSCTTCEEEECS
T ss_pred CCCCEEEECCC-----C-----HHHHHHHHHHHhcCCEEEEEe
Confidence 56999986542 1 346788899999999998764
No 333
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=96.58 E-value=0.012 Score=47.95 Aligned_cols=108 Identities=11% Similarity=0.075 Sum_probs=66.3
Q ss_pred CCCCeEEEEeCCc-hHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcc-hHHHHhh-c-CCce
Q psy4592 56 PNPKKVLIVGGGD-GGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGD-GFRFMSE-H-QQEF 131 (197)
Q Consensus 56 ~~~~~vLdiG~G~-G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d-~~~~~~~-~-~~~~ 131 (197)
..+.+||.+|+|. |.++..+++..+...|+++|.+++-++.+++. . -..+.+...+ ..+.+.. . ...+
T Consensus 184 ~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~l-G-------a~~i~~~~~~~~~~~v~~~t~g~g~ 255 (398)
T 1kol_A 184 GPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQ-G-------FEIADLSLDTPLHEQIAALLGEPEV 255 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT-T-------CEEEETTSSSCHHHHHHHHHSSSCE
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHc-C-------CcEEccCCcchHHHHHHHHhCCCCC
Confidence 4668999999865 66677777765544799999999999998763 1 1111111112 2333332 2 2479
Q ss_pred eEEEECCCCCCCC-----CcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 132 DVIITDSSDPVGP-----AESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 132 D~I~~~~~~~~~~-----~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
|+|+-........ ..+......++.+.+.|+++|.+++..
T Consensus 256 Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G 300 (398)
T 1kol_A 256 DCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPG 300 (398)
T ss_dssp EEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECS
T ss_pred CEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEec
Confidence 9998765322100 000111347788999999999998754
No 334
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=96.56 E-value=0.016 Score=46.87 Aligned_cols=99 Identities=11% Similarity=0.075 Sum_probs=63.7
Q ss_pred CCCCeEEEEeCCc-hHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEE--cchHHHHhh-cCCce
Q psy4592 56 PNPKKVLIVGGGD-GGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHV--GDGFRFMSE-HQQEF 131 (197)
Q Consensus 56 ~~~~~vLdiG~G~-G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~--~d~~~~~~~-~~~~~ 131 (197)
..+.+||.+|+|. |.++..+++..+..+|++++.+++-.+.+++. .. + .-+.... .|..+.+.. ..+.+
T Consensus 191 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~l-Ga-----~-~vi~~~~~~~~~~~~~~~~~~~g~ 263 (374)
T 1cdo_A 191 EPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVF-GA-----T-DFVNPNDHSEPISQVLSKMTNGGV 263 (374)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT-TC-----C-EEECGGGCSSCHHHHHHHHHTSCB
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHh-CC-----c-eEEeccccchhHHHHHHHHhCCCC
Confidence 4568999999764 55666677665534799999999999988763 21 0 0011100 123333322 23479
Q ss_pred eEEEECCCCCCCCCcccccHHHHHHHHhhcCCC-cEEEEEc
Q psy4592 132 DVIITDSSDPVGPAESLFQASYFELMSRALRPG-GIVCSQA 171 (197)
Q Consensus 132 D~I~~~~~~~~~~~~~l~~~~~~~~~~~~Lkpg-G~l~~~~ 171 (197)
|+|+.... . ...++.+.+.|+++ |.+++..
T Consensus 264 D~vid~~g-----~-----~~~~~~~~~~l~~~~G~iv~~G 294 (374)
T 1cdo_A 264 DFSLECVG-----N-----VGVMRNALESCLKGWGVSVLVG 294 (374)
T ss_dssp SEEEECSC-----C-----HHHHHHHHHTBCTTTCEEEECS
T ss_pred CEEEECCC-----C-----HHHHHHHHHHhhcCCcEEEEEc
Confidence 99985542 1 45778899999999 9998764
No 335
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=96.53 E-value=0.0075 Score=48.01 Aligned_cols=99 Identities=12% Similarity=0.057 Sum_probs=64.2
Q ss_pred CCCCCeEEEEeC--CchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhh-cCCce
Q psy4592 55 HPNPKKVLIVGG--GDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSE-HQQEF 131 (197)
Q Consensus 55 ~~~~~~vLdiG~--G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~~~ 131 (197)
.+++++||.+|+ |.|..+..+++..+ .++++++.+++-.+.+.+.+.. ..-+.....|..+.+.. ..+.+
T Consensus 147 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~~~g~------~~~~~~~~~~~~~~~~~~~~~~~ 219 (336)
T 4b7c_A 147 PKNGETVVISGAAGAVGSVAGQIARLKG-CRVVGIAGGAEKCRFLVEELGF------DGAIDYKNEDLAAGLKRECPKGI 219 (336)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHTTCC------SEEEETTTSCHHHHHHHHCTTCE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHcCC------CEEEECCCHHHHHHHHHhcCCCc
Confidence 356789999998 45566666666555 5999999999988888443321 10111111233333332 24579
Q ss_pred eEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 132 DVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 132 D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
|+|+.+.- ...++.+.+.|+++|.+++..
T Consensus 220 d~vi~~~g-----------~~~~~~~~~~l~~~G~iv~~G 248 (336)
T 4b7c_A 220 DVFFDNVG-----------GEILDTVLTRIAFKARIVLCG 248 (336)
T ss_dssp EEEEESSC-----------HHHHHHHHTTEEEEEEEEECC
T ss_pred eEEEECCC-----------cchHHHHHHHHhhCCEEEEEe
Confidence 99986552 246788999999999998754
No 336
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=96.51 E-value=0.0032 Score=46.17 Aligned_cols=97 Identities=18% Similarity=0.120 Sum_probs=59.6
Q ss_pred CCCCeEEEEeC--CchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhh-c-CCce
Q psy4592 56 PNPKKVLIVGG--GDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSE-H-QQEF 131 (197)
Q Consensus 56 ~~~~~vLdiG~--G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~-~~~~ 131 (197)
.++++||..|+ |.|.....+++..+ .++++++.+++..+.+++. . ....+.....+..+.+.. . ...+
T Consensus 37 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G-~~V~~~~~~~~~~~~~~~~-g------~~~~~d~~~~~~~~~~~~~~~~~~~ 108 (198)
T 1pqw_A 37 SPGERVLIHSATGGVGMAAVSIAKMIG-ARIYTTAGSDAKREMLSRL-G------VEYVGDSRSVDFADEILELTDGYGV 108 (198)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHHT-CEEEEEESSHHHHHHHHTT-C------CSEEEETTCSTHHHHHHHHTTTCCE
T ss_pred CCCCEEEEeeCCChHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHc-C------CCEEeeCCcHHHHHHHHHHhCCCCC
Confidence 45679999995 44555555555434 6899999999888777552 1 110111111233232322 1 2469
Q ss_pred eEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 132 DVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 132 D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
|+++.+.. ...++.+.+.|+++|.+++..
T Consensus 109 D~vi~~~g-----------~~~~~~~~~~l~~~G~~v~~g 137 (198)
T 1pqw_A 109 DVVLNSLA-----------GEAIQRGVQILAPGGRFIELG 137 (198)
T ss_dssp EEEEECCC-----------THHHHHHHHTEEEEEEEEECS
T ss_pred eEEEECCc-----------hHHHHHHHHHhccCCEEEEEc
Confidence 99996542 135688899999999998764
No 337
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=96.50 E-value=0.018 Score=46.56 Aligned_cols=99 Identities=13% Similarity=0.058 Sum_probs=63.7
Q ss_pred CCCCeEEEEeCCc-hHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEE--cchHHHHhh-cCCce
Q psy4592 56 PNPKKVLIVGGGD-GGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHV--GDGFRFMSE-HQQEF 131 (197)
Q Consensus 56 ~~~~~vLdiG~G~-G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~--~d~~~~~~~-~~~~~ 131 (197)
..+.+||.+|+|. |.++..+++..+..+|++++.+++-.+.+++. .. + .-+.... .|..+.+.. ..+.+
T Consensus 194 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-Ga-----~-~vi~~~~~~~~~~~~v~~~~~~g~ 266 (376)
T 1e3i_A 194 TPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKAL-GA-----T-DCLNPRELDKPVQDVITELTAGGV 266 (376)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT-TC-----S-EEECGGGCSSCHHHHHHHHHTSCB
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHh-CC-----c-EEEccccccchHHHHHHHHhCCCc
Confidence 4568999999763 55666677765534899999999998888763 11 0 0011100 223333322 23479
Q ss_pred eEEEECCCCCCCCCcccccHHHHHHHHhhcCCC-cEEEEEc
Q psy4592 132 DVIITDSSDPVGPAESLFQASYFELMSRALRPG-GIVCSQA 171 (197)
Q Consensus 132 D~I~~~~~~~~~~~~~l~~~~~~~~~~~~Lkpg-G~l~~~~ 171 (197)
|+|+-... . ...++.+.+.|+++ |.+++..
T Consensus 267 Dvvid~~G-----~-----~~~~~~~~~~l~~~~G~iv~~G 297 (376)
T 1e3i_A 267 DYSLDCAG-----T-----AQTLKAAVDCTVLGWGSCTVVG 297 (376)
T ss_dssp SEEEESSC-----C-----HHHHHHHHHTBCTTTCEEEECC
T ss_pred cEEEECCC-----C-----HHHHHHHHHHhhcCCCEEEEEC
Confidence 99985442 1 45778999999999 9998754
No 338
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=96.47 E-value=0.02 Score=46.28 Aligned_cols=99 Identities=10% Similarity=0.022 Sum_probs=63.5
Q ss_pred CCCCeEEEEeCCc-hHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEE--cchHHHHhh-cCCce
Q psy4592 56 PNPKKVLIVGGGD-GGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHV--GDGFRFMSE-HQQEF 131 (197)
Q Consensus 56 ~~~~~vLdiG~G~-G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~--~d~~~~~~~-~~~~~ 131 (197)
+.+.+||.+|+|. |.++..+++..+..+|++++.+++-.+.+++. .. ..-+.... .|..+.+.. ..+.+
T Consensus 190 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~l-Ga------~~vi~~~~~~~~~~~~~~~~~~~g~ 262 (374)
T 2jhf_A 190 TQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEV-GA------TECVNPQDYKKPIQEVLTEMSNGGV 262 (374)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT-TC------SEEECGGGCSSCHHHHHHHHTTSCB
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHh-CC------ceEecccccchhHHHHHHHHhCCCC
Confidence 4568999999764 55666666665534799999999998888763 11 00011100 123333332 23479
Q ss_pred eEEEECCCCCCCCCcccccHHHHHHHHhhcCCC-cEEEEEc
Q psy4592 132 DVIITDSSDPVGPAESLFQASYFELMSRALRPG-GIVCSQA 171 (197)
Q Consensus 132 D~I~~~~~~~~~~~~~l~~~~~~~~~~~~Lkpg-G~l~~~~ 171 (197)
|+|+.... . ...++.+.+.|+++ |.+++..
T Consensus 263 D~vid~~g-----~-----~~~~~~~~~~l~~~~G~iv~~G 293 (374)
T 2jhf_A 263 DFSFEVIG-----R-----LDTMVTALSCCQEAYGVSVIVG 293 (374)
T ss_dssp SEEEECSC-----C-----HHHHHHHHHHBCTTTCEEEECS
T ss_pred cEEEECCC-----C-----HHHHHHHHHHhhcCCcEEEEec
Confidence 99985542 1 45778899999999 9998754
No 339
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=96.46 E-value=0.016 Score=46.84 Aligned_cols=99 Identities=11% Similarity=0.023 Sum_probs=63.7
Q ss_pred CCCCeEEEEeCCc-hHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEE--cchHHHHhh-cCCce
Q psy4592 56 PNPKKVLIVGGGD-GGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHV--GDGFRFMSE-HQQEF 131 (197)
Q Consensus 56 ~~~~~vLdiG~G~-G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~--~d~~~~~~~-~~~~~ 131 (197)
..+.+||.+|+|. |.++..+++..+..+|++++.+++-.+.+++. .. ..-+.... .|..+.+.. ..+.+
T Consensus 190 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-Ga------~~vi~~~~~~~~~~~~i~~~t~gg~ 262 (373)
T 1p0f_A 190 TPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIEL-GA------TECLNPKDYDKPIYEVICEKTNGGV 262 (373)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHT-TC------SEEECGGGCSSCHHHHHHHHTTSCB
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHc-CC------cEEEecccccchHHHHHHHHhCCCC
Confidence 4568999999864 55566666655534799999999998988763 21 00011110 233333332 23479
Q ss_pred eEEEECCCCCCCCCcccccHHHHHHHHhhcCCC-cEEEEEc
Q psy4592 132 DVIITDSSDPVGPAESLFQASYFELMSRALRPG-GIVCSQA 171 (197)
Q Consensus 132 D~I~~~~~~~~~~~~~l~~~~~~~~~~~~Lkpg-G~l~~~~ 171 (197)
|+|+-... . ...++.+.+.|+++ |.+++..
T Consensus 263 Dvvid~~g-----~-----~~~~~~~~~~l~~~~G~iv~~G 293 (373)
T 1p0f_A 263 DYAVECAG-----R-----IETMMNALQSTYCGSGVTVVLG 293 (373)
T ss_dssp SEEEECSC-----C-----HHHHHHHHHTBCTTTCEEEECC
T ss_pred CEEEECCC-----C-----HHHHHHHHHHHhcCCCEEEEEc
Confidence 99985442 1 45778899999999 9998764
No 340
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=96.36 E-value=0.02 Score=46.20 Aligned_cols=99 Identities=12% Similarity=0.054 Sum_probs=63.5
Q ss_pred CCCCeEEEEeCCc-hHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEE--cchHHHHhh-cCCce
Q psy4592 56 PNPKKVLIVGGGD-GGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHV--GDGFRFMSE-HQQEF 131 (197)
Q Consensus 56 ~~~~~vLdiG~G~-G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~--~d~~~~~~~-~~~~~ 131 (197)
..+.+||.+|+|. |.++..+++..+..++++++.+++-.+.+++.-. + .-+.... .|..+.+.. ..+.+
T Consensus 189 ~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa------~-~vi~~~~~~~~~~~~v~~~~~~g~ 261 (373)
T 2fzw_A 189 EPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGA------T-ECINPQDFSKPIQEVLIEMTDGGV 261 (373)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTC------S-EEECGGGCSSCHHHHHHHHTTSCB
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCC------c-eEeccccccccHHHHHHHHhCCCC
Confidence 4568999999764 5556666665553479999999999898876421 0 0011100 123333332 23479
Q ss_pred eEEEECCCCCCCCCcccccHHHHHHHHhhcCCC-cEEEEEc
Q psy4592 132 DVIITDSSDPVGPAESLFQASYFELMSRALRPG-GIVCSQA 171 (197)
Q Consensus 132 D~I~~~~~~~~~~~~~l~~~~~~~~~~~~Lkpg-G~l~~~~ 171 (197)
|+|+.... . ...++.+.+.|+++ |.+++..
T Consensus 262 D~vid~~g-----~-----~~~~~~~~~~l~~~~G~iv~~G 292 (373)
T 2fzw_A 262 DYSFECIG-----N-----VKVMRAALEACHKGWGVSVVVG 292 (373)
T ss_dssp SEEEECSC-----C-----HHHHHHHHHTBCTTTCEEEECS
T ss_pred CEEEECCC-----c-----HHHHHHHHHhhccCCcEEEEEe
Confidence 99985542 1 45678899999999 9998764
No 341
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=96.34 E-value=0.0097 Score=47.28 Aligned_cols=97 Identities=10% Similarity=0.111 Sum_probs=61.6
Q ss_pred CCCCeEEEEeC--CchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEE-cchHHHHhh-cCCce
Q psy4592 56 PNPKKVLIVGG--GDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHV-GDGFRFMSE-HQQEF 131 (197)
Q Consensus 56 ~~~~~vLdiG~--G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~-~d~~~~~~~-~~~~~ 131 (197)
..+++||..|+ |.|..+..+++..+ .++++++.+++.++.+++. .. ...+.+.. .+..+.+.. ..+.+
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G-~~V~~~~~~~~~~~~~~~~-g~------~~~~d~~~~~~~~~~~~~~~~~~~ 215 (333)
T 1v3u_A 144 KGGETVLVSAAAGAVGSVVGQIAKLKG-CKVVGAAGSDEKIAYLKQI-GF------DAAFNYKTVNSLEEALKKASPDGY 215 (333)
T ss_dssp CSSCEEEEESTTBHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHT-TC------SEEEETTSCSCHHHHHHHHCTTCE
T ss_pred CCCCEEEEecCCCcHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHhc-CC------cEEEecCCHHHHHHHHHHHhCCCC
Confidence 45689999997 45555555555544 5899999999888887442 21 10111111 233333332 23479
Q ss_pred eEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 132 DVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 132 D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
|+++.+.. ...++.+.+.|+++|.+++..
T Consensus 216 d~vi~~~g-----------~~~~~~~~~~l~~~G~~v~~g 244 (333)
T 1v3u_A 216 DCYFDNVG-----------GEFLNTVLSQMKDFGKIAICG 244 (333)
T ss_dssp EEEEESSC-----------HHHHHHHHTTEEEEEEEEECC
T ss_pred eEEEECCC-----------hHHHHHHHHHHhcCCEEEEEe
Confidence 99987652 235688889999999998764
No 342
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=96.33 E-value=0.036 Score=44.13 Aligned_cols=100 Identities=14% Similarity=0.124 Sum_probs=65.1
Q ss_pred CCCCCeEEEEeCCch-HhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhh--cCCce
Q psy4592 55 HPNPKKVLIVGGGDG-GVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSE--HQQEF 131 (197)
Q Consensus 55 ~~~~~~vLdiG~G~G-~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~--~~~~~ 131 (197)
...+.+||..|+|.. .++..+++..+...+++++.+++-++.+++.-. ..-+.....|..+.... ....+
T Consensus 158 ~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa-------~~~i~~~~~~~~~~~~~~~~~~g~ 230 (346)
T 4a2c_A 158 GCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGA-------MQTFNSSEMSAPQMQSVLRELRFN 230 (346)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTC-------SEEEETTTSCHHHHHHHHGGGCSS
T ss_pred cCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCC-------eEEEeCCCCCHHHHHHhhcccCCc
Confidence 356689999998754 345556666565678899999999999987421 11122222333333322 23467
Q ss_pred eEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 132 DVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 132 D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
|+|+...- ....++.+.+.|+++|.+++..
T Consensus 231 d~v~d~~G----------~~~~~~~~~~~l~~~G~~v~~g 260 (346)
T 4a2c_A 231 QLILETAG----------VPQTVELAVEIAGPHAQLALVG 260 (346)
T ss_dssp EEEEECSC----------SHHHHHHHHHHCCTTCEEEECC
T ss_pred cccccccc----------ccchhhhhhheecCCeEEEEEe
Confidence 88875431 1567888999999999999865
No 343
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=96.28 E-value=0.0099 Score=47.46 Aligned_cols=98 Identities=13% Similarity=0.058 Sum_probs=62.4
Q ss_pred CCCCCeEEEEeCC--chHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhh-c-CCc
Q psy4592 55 HPNPKKVLIVGGG--DGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSE-H-QQE 130 (197)
Q Consensus 55 ~~~~~~vLdiG~G--~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~-~~~ 130 (197)
.+.+++||.+|+| .|..+..+++..+ .++++++.+++-++.+++.-. ..-+.....|..+.+.. . ...
T Consensus 142 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~lga-------~~~~~~~~~~~~~~~~~~~~~~g 213 (340)
T 3gms_A 142 LQRNDVLLVNACGSAIGHLFAQLSQILN-FRLIAVTRNNKHTEELLRLGA-------AYVIDTSTAPLYETVMELTNGIG 213 (340)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHHT-CEEEEEESSSTTHHHHHHHTC-------SEEEETTTSCHHHHHHHHTTTSC
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHhCCC-------cEEEeCCcccHHHHHHHHhCCCC
Confidence 3566899999987 4566666776555 689999999988888877421 10111111233333332 2 347
Q ss_pred eeEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 131 FDVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 131 ~D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
+|+|+.+.. ........+.|+++|.+++..
T Consensus 214 ~Dvvid~~g-----------~~~~~~~~~~l~~~G~iv~~G 243 (340)
T 3gms_A 214 ADAAIDSIG-----------GPDGNELAFSLRPNGHFLTIG 243 (340)
T ss_dssp EEEEEESSC-----------HHHHHHHHHTEEEEEEEEECC
T ss_pred CcEEEECCC-----------ChhHHHHHHHhcCCCEEEEEe
Confidence 999986552 122344558999999999865
No 344
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=96.20 E-value=0.0097 Score=47.50 Aligned_cols=98 Identities=20% Similarity=0.227 Sum_probs=63.0
Q ss_pred CCCCeEEEEeCC-chHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEE
Q psy4592 56 PNPKKVLIVGGG-DGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVI 134 (197)
Q Consensus 56 ~~~~~vLdiG~G-~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I 134 (197)
+.+++||.+|+| .|..+..+++..+ .++++++.+++-++.+++. .. + .-+.+...|..+.+....+.+|+|
T Consensus 163 ~~g~~VlV~GaG~vG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~l-Ga-----~-~~~d~~~~~~~~~~~~~~~~~d~v 234 (339)
T 1rjw_A 163 KPGEWVAIYGIGGLGHVAVQYAKAMG-LNVVAVDIGDEKLELAKEL-GA-----D-LVVNPLKEDAAKFMKEKVGGVHAA 234 (339)
T ss_dssp CTTCEEEEECCSTTHHHHHHHHHHTT-CEEEEECSCHHHHHHHHHT-TC-----S-EEECTTTSCHHHHHHHHHSSEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHC-CC-----C-EEecCCCccHHHHHHHHhCCCCEE
Confidence 566899999985 3556666666555 5999999999988888763 21 0 001111123322222211579999
Q ss_pred EECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 135 ITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 135 ~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
+.... . ...++.+.+.|+++|.+++..
T Consensus 235 id~~g-----~-----~~~~~~~~~~l~~~G~~v~~g 261 (339)
T 1rjw_A 235 VVTAV-----S-----KPAFQSAYNSIRRGGACVLVG 261 (339)
T ss_dssp EESSC-----C-----HHHHHHHHHHEEEEEEEEECC
T ss_pred EECCC-----C-----HHHHHHHHHHhhcCCEEEEec
Confidence 86552 1 356788899999999988754
No 345
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=96.15 E-value=0.011 Score=47.22 Aligned_cols=98 Identities=23% Similarity=0.204 Sum_probs=63.0
Q ss_pred CCCeEEEEeCCc-hHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhh-c-CCceeE
Q psy4592 57 NPKKVLIVGGGD-GGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSE-H-QQEFDV 133 (197)
Q Consensus 57 ~~~~vLdiG~G~-G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~-~~~~D~ 133 (197)
.+.+||.+|+|. |..+..+++..+..++++++.+++-.+.+++.-. + .-+.....|..+.+.. . ...+|+
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga------~-~~~~~~~~~~~~~v~~~~~g~g~D~ 239 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGA------D-YVINPFEEDVVKEVMDITDGNGVDV 239 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTC------S-EEECTTTSCHHHHHHHHTTTSCEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCC------C-EEECCCCcCHHHHHHHHcCCCCCCE
Confidence 567999999853 5556666665553389999999998888876421 0 0011111233333332 1 236999
Q ss_pred EEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 134 IITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 134 I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
|+.... . ...++.+.+.|+++|.++...
T Consensus 240 vid~~g-----~-----~~~~~~~~~~l~~~G~iv~~g 267 (348)
T 2d8a_A 240 FLEFSG-----A-----PKALEQGLQAVTPAGRVSLLG 267 (348)
T ss_dssp EEECSC-----C-----HHHHHHHHHHEEEEEEEEECC
T ss_pred EEECCC-----C-----HHHHHHHHHHHhcCCEEEEEc
Confidence 986552 1 457788999999999988764
No 346
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=96.13 E-value=0.014 Score=47.34 Aligned_cols=96 Identities=15% Similarity=0.171 Sum_probs=62.3
Q ss_pred CCCCeEEEEeCCc-hHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEc------chHHHHhh-c
Q psy4592 56 PNPKKVLIVGGGD-GGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVG------DGFRFMSE-H 127 (197)
Q Consensus 56 ~~~~~vLdiG~G~-G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~------d~~~~~~~-~ 127 (197)
+.+.+||.+|+|. |.++..+++..+..+|++++.+++-.+.+++. .. . .++.. |..+.+.. .
T Consensus 194 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~l-Ga--------~-~vi~~~~~~~~~~~~~v~~~~ 263 (380)
T 1vj0_A 194 FAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEI-GA--------D-LTLNRRETSVEERRKAIMDIT 263 (380)
T ss_dssp CBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHT-TC--------S-EEEETTTSCHHHHHHHHHHHT
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHc-CC--------c-EEEeccccCcchHHHHHHHHh
Confidence 4568999999653 55566666665535899999999998888753 21 1 12221 22222222 2
Q ss_pred -CCceeEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 128 -QQEFDVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 128 -~~~~D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
...+|+|+-... . ...++.+.+.|+++|.++...
T Consensus 264 ~g~g~Dvvid~~g-----~-----~~~~~~~~~~l~~~G~iv~~G 298 (380)
T 1vj0_A 264 HGRGADFILEATG-----D-----SRALLEGSELLRRGGFYSVAG 298 (380)
T ss_dssp TTSCEEEEEECSS-----C-----TTHHHHHHHHEEEEEEEEECC
T ss_pred CCCCCcEEEECCC-----C-----HHHHHHHHHHHhcCCEEEEEe
Confidence 236999986542 1 235688889999999998764
No 347
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=96.11 E-value=0.017 Score=46.74 Aligned_cols=95 Identities=18% Similarity=0.197 Sum_probs=61.6
Q ss_pred CCCCeEEEEeCCc-hHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEE
Q psy4592 56 PNPKKVLIVGGGD-GGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVI 134 (197)
Q Consensus 56 ~~~~~vLdiG~G~-G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I 134 (197)
..+.+||.+|+|. |.++..+++..+ .++++++.+++-.+.+++. .. . .++...-.++.......+|+|
T Consensus 193 ~~g~~VlV~GaG~vG~~aiqlak~~G-a~Vi~~~~~~~~~~~a~~l-Ga--------~-~vi~~~~~~~~~~~~~g~Dvv 261 (369)
T 1uuf_A 193 GPGKKVGVVGIGGLGHMGIKLAHAMG-AHVVAFTTSEAKREAAKAL-GA--------D-EVVNSRNADEMAAHLKSFDFI 261 (369)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTT-CEEEEEESSGGGHHHHHHH-TC--------S-EEEETTCHHHHHTTTTCEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHc-CC--------c-EEeccccHHHHHHhhcCCCEE
Confidence 4568999999874 566666776655 5799999999998888763 21 1 122111122222222579999
Q ss_pred EECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 135 ITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 135 ~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
+..... . ..++.+.+.|+++|.++...
T Consensus 262 id~~g~----~------~~~~~~~~~l~~~G~iv~~G 288 (369)
T 1uuf_A 262 LNTVAA----P------HNLDDFTTLLKRDGTMTLVG 288 (369)
T ss_dssp EECCSS----C------CCHHHHHTTEEEEEEEEECC
T ss_pred EECCCC----H------HHHHHHHHHhccCCEEEEec
Confidence 865421 1 13467889999999988754
No 348
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=96.10 E-value=0.018 Score=45.91 Aligned_cols=98 Identities=8% Similarity=0.059 Sum_probs=63.1
Q ss_pred CCCCeEEEEeC--CchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEE-cchHHHHhh-cCCce
Q psy4592 56 PNPKKVLIVGG--GDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHV-GDGFRFMSE-HQQEF 131 (197)
Q Consensus 56 ~~~~~vLdiG~--G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~-~d~~~~~~~-~~~~~ 131 (197)
..+++||.+|+ |.|..+..+++..+ .++++++.+++-++.+++.+.. ..-+.+.. .+..+.+.. ....+
T Consensus 154 ~~g~~vlI~Ga~g~iG~~~~~~a~~~G-~~V~~~~~~~~~~~~~~~~~g~------~~~~d~~~~~~~~~~~~~~~~~~~ 226 (345)
T 2j3h_A 154 KEGETVYVSAASGAVGQLVGQLAKMMG-CYVVGSAGSKEKVDLLKTKFGF------DDAFNYKEESDLTAALKRCFPNGI 226 (345)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHTSCC------SEEEETTSCSCSHHHHHHHCTTCE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHcCC------ceEEecCCHHHHHHHHHHHhCCCC
Confidence 45689999997 45566666666555 6899999999888888743321 00011111 133333332 23469
Q ss_pred eEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 132 DVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 132 D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
|+|+.+.. ...++.+.+.|+++|.+++..
T Consensus 227 d~vi~~~g-----------~~~~~~~~~~l~~~G~~v~~G 255 (345)
T 2j3h_A 227 DIYFENVG-----------GKMLDAVLVNMNMHGRIAVCG 255 (345)
T ss_dssp EEEEESSC-----------HHHHHHHHTTEEEEEEEEECC
T ss_pred cEEEECCC-----------HHHHHHHHHHHhcCCEEEEEc
Confidence 99986652 236788899999999998754
No 349
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=96.07 E-value=0.018 Score=46.33 Aligned_cols=94 Identities=14% Similarity=0.208 Sum_probs=60.2
Q ss_pred CeEEEEeCCc-hHhH-HHHh-cCCCCccEEEEEcCHH---HHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCcee
Q psy4592 59 KKVLIVGGGD-GGVA-REVL-KHPSVESAYLVEIDNR---VIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFD 132 (197)
Q Consensus 59 ~~vLdiG~G~-G~~~-~~l~-~~~~~~~v~~ve~~~~---~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D 132 (197)
.+||.+|+|. |.++ ..++ +..+..+|++++.+++ -.+.+++. .. ..+.....|..+ +....+.+|
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~l-Ga-------~~v~~~~~~~~~-i~~~~gg~D 244 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEEL-DA-------TYVDSRQTPVED-VPDVYEQMD 244 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHT-TC-------EEEETTTSCGGG-HHHHSCCEE
T ss_pred CEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHc-CC-------cccCCCccCHHH-HHHhCCCCC
Confidence 7999999853 5566 6777 7665334999999988 78888753 11 111111123223 221123799
Q ss_pred EEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 133 VIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 133 ~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
+|+-... . ...++.+.+.|+++|.+++..
T Consensus 245 vvid~~g-----~-----~~~~~~~~~~l~~~G~iv~~g 273 (357)
T 2b5w_A 245 FIYEATG-----F-----PKHAIQSVQALAPNGVGALLG 273 (357)
T ss_dssp EEEECSC-----C-----HHHHHHHHHHEEEEEEEEECC
T ss_pred EEEECCC-----C-----hHHHHHHHHHHhcCCEEEEEe
Confidence 9985442 1 346788999999999998865
No 350
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=96.05 E-value=0.021 Score=46.76 Aligned_cols=100 Identities=15% Similarity=0.163 Sum_probs=61.6
Q ss_pred CCCCeEEEEeCCc-hHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhh-c-CCcee
Q psy4592 56 PNPKKVLIVGGGD-GGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSE-H-QQEFD 132 (197)
Q Consensus 56 ~~~~~vLdiG~G~-G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~-~~~~D 132 (197)
..+.+||.+|+|. |.++..+++..+..++++++.+++-.+.+++.-.. .-+.....|..+.+.. . ...+|
T Consensus 212 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~-------~vi~~~~~~~~~~i~~~t~g~g~D 284 (404)
T 3ip1_A 212 RPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGAD-------HVIDPTKENFVEAVLDYTNGLGAK 284 (404)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCS-------EEECTTTSCHHHHHHHHTTTCCCS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCC-------EEEcCCCCCHHHHHHHHhCCCCCC
Confidence 4568999999864 45566667665544899999999999998875210 0011111243333333 2 34699
Q ss_pred EEEECCCCCCCCCcccccHHHHHHHHhhc----CCCcEEEEEc
Q psy4592 133 VIITDSSDPVGPAESLFQASYFELMSRAL----RPGGIVCSQA 171 (197)
Q Consensus 133 ~I~~~~~~~~~~~~~l~~~~~~~~~~~~L----kpgG~l~~~~ 171 (197)
+|+-... .. ...++.+.+.| +++|.+++..
T Consensus 285 ~vid~~g-----~~----~~~~~~~~~~l~~~~~~~G~iv~~G 318 (404)
T 3ip1_A 285 LFLEATG-----VP----QLVWPQIEEVIWRARGINATVAIVA 318 (404)
T ss_dssp EEEECSS-----CH----HHHHHHHHHHHHHCSCCCCEEEECS
T ss_pred EEEECCC-----Cc----HHHHHHHHHHHHhccCCCcEEEEeC
Confidence 9985442 11 12445555555 9999999864
No 351
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=96.05 E-value=0.017 Score=46.54 Aligned_cols=97 Identities=11% Similarity=0.113 Sum_probs=62.7
Q ss_pred CCCCeEEEEeCCc-hHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhh-c-CCcee
Q psy4592 56 PNPKKVLIVGGGD-GGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSE-H-QQEFD 132 (197)
Q Consensus 56 ~~~~~vLdiG~G~-G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~-~~~~D 132 (197)
+.+.+||.+|+|. |.++..+++..+ .++++++.+++-.+.+++.-. ..-+.....|..+.+.. . ...+|
T Consensus 188 ~~g~~VlV~G~G~vG~~a~qla~~~G-a~Vi~~~~~~~~~~~~~~lGa-------~~vi~~~~~~~~~~v~~~~~g~g~D 259 (363)
T 3uog_A 188 RAGDRVVVQGTGGVALFGLQIAKATG-AEVIVTSSSREKLDRAFALGA-------DHGINRLEEDWVERVYALTGDRGAD 259 (363)
T ss_dssp CTTCEEEEESSBHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHTC-------SEEEETTTSCHHHHHHHHHTTCCEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcC-CEEEEEecCchhHHHHHHcCC-------CEEEcCCcccHHHHHHHHhCCCCce
Confidence 4568999999764 556666676655 599999999998888877421 10111000233333332 2 34799
Q ss_pred EEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 133 VIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 133 ~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
+|+.... . ..++.+.+.|+++|.+++..
T Consensus 260 ~vid~~g-----~------~~~~~~~~~l~~~G~iv~~G 287 (363)
T 3uog_A 260 HILEIAG-----G------AGLGQSLKAVAPDGRISVIG 287 (363)
T ss_dssp EEEEETT-----S------SCHHHHHHHEEEEEEEEEEC
T ss_pred EEEECCC-----h------HHHHHHHHHhhcCCEEEEEe
Confidence 9986552 1 13577888999999999875
No 352
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=95.93 E-value=0.0099 Score=47.53 Aligned_cols=94 Identities=10% Similarity=0.034 Sum_probs=61.6
Q ss_pred CCCeEEEEeCCc-hHhHHHHhcCC--CCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcch-HHHHhh-c-CCc
Q psy4592 57 NPKKVLIVGGGD-GGVAREVLKHP--SVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDG-FRFMSE-H-QQE 130 (197)
Q Consensus 57 ~~~~vLdiG~G~-G~~~~~l~~~~--~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~-~~~~~~-~-~~~ 130 (197)
.+.+||.+|+|. |.++..+++.. + .++++++.+++-.+.+++. .. . .++..+- .+.... . ...
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~G-a~Vi~~~~~~~~~~~~~~l-Ga--------~-~vi~~~~~~~~~~~~~~g~g 238 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKN-ITIVGISRSKKHRDFALEL-GA--------D-YVSEMKDAESLINKLTDGLG 238 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTT-CEEEEECSCHHHHHHHHHH-TC--------S-EEECHHHHHHHHHHHHTTCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCC-CEEEEEeCCHHHHHHHHHh-CC--------C-EEeccccchHHHHHhhcCCC
Confidence 567999999864 55566666654 4 6899999999988888764 21 1 1111110 111211 1 337
Q ss_pred eeEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 131 FDVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 131 ~D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
+|+|+.... ....++.+.+.|+++|.++...
T Consensus 239 ~D~vid~~g----------~~~~~~~~~~~l~~~G~iv~~g 269 (344)
T 2h6e_A 239 ASIAIDLVG----------TEETTYNLGKLLAQEGAIILVG 269 (344)
T ss_dssp EEEEEESSC----------CHHHHHHHHHHEEEEEEEEECC
T ss_pred ccEEEECCC----------ChHHHHHHHHHhhcCCEEEEeC
Confidence 999986542 1446788999999999998754
No 353
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=95.89 E-value=0.026 Score=45.56 Aligned_cols=96 Identities=13% Similarity=0.123 Sum_probs=62.6
Q ss_pred CCCeEEEEe-CC-chHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhh-cCCceeE
Q psy4592 57 NPKKVLIVG-GG-DGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSE-HQQEFDV 133 (197)
Q Consensus 57 ~~~~vLdiG-~G-~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~~~D~ 133 (197)
.+.+||.+| +| .|.++..+++.....++++++.+++-.+.+++. .. + .-+.. ..|..+.+.. ..+.+|+
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~l-Ga-----d-~vi~~-~~~~~~~v~~~~~~g~Dv 242 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSL-GA-----H-HVIDH-SKPLAAEVAALGLGAPAF 242 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHT-TC-----S-EEECT-TSCHHHHHHTTCSCCEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHc-CC-----C-EEEeC-CCCHHHHHHHhcCCCceE
Confidence 457899998 43 466777777753337999999999988888763 21 0 00110 0133333332 2457999
Q ss_pred EEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEE
Q psy4592 134 IITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQ 170 (197)
Q Consensus 134 I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~ 170 (197)
|+-... ....++.+.+.|+++|.+++.
T Consensus 243 vid~~g----------~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 243 VFSTTH----------TDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp EEECSC----------HHHHHHHHHHHSCTTCEEEEC
T ss_pred EEECCC----------chhhHHHHHHHhcCCCEEEEE
Confidence 985431 145778999999999999876
No 354
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=95.79 E-value=0.19 Score=46.01 Aligned_cols=123 Identities=13% Similarity=0.110 Sum_probs=79.2
Q ss_pred CCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhh----------
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSE---------- 126 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~---------- 126 (197)
.+.+++|+.||.|+++..+...+-...+.++|+++...+..+.|++ ...++.+|+.++...
T Consensus 539 ~~l~~iDLFaG~GGlslGl~~AG~~~vv~avEid~~A~~ty~~N~p---------~~~~~~~DI~~l~~~~~~~di~~~~ 609 (1002)
T 3swr_A 539 PKLRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNNP---------GSTVFTEDCNILLKLVMAGETTNSR 609 (1002)
T ss_dssp CCEEEEEESCTTSHHHHHHHHHTSEEEEEEECSSHHHHHHHHHHCT---------TSEEECSCHHHHHHHHHHTCSBCTT
T ss_pred CCCeEEEeccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhCC---------CCccccccHHHHhhhccchhhhhhh
Confidence 3458999999999999887765311468899999999998888864 356778888765321
Q ss_pred -----cCCceeEEEECCCCCC-CCCcc------------cccHHHHHHHHhhcCCCcEEEEEcCCCC--cChhHHHHHHH
Q psy4592 127 -----HQQEFDVIITDSSDPV-GPAES------------LFQASYFELMSRALRPGGIVCSQAGTLW--YSLDCVGNTLQ 186 (197)
Q Consensus 127 -----~~~~~D~I~~~~~~~~-~~~~~------------l~~~~~~~~~~~~LkpgG~l~~~~~~~~--~~~~~~~~~~~ 186 (197)
..+.+|+|+..+|... +.... |+ .+++ .+.+.++|.-+++=|+.... .....++.++.
T Consensus 610 ~~~lp~~~~vDll~GGpPCQ~FS~ag~~~~~~~~d~R~~L~-~~~~-riv~~~rPk~~llENV~glls~~~~~~~~~i~~ 687 (1002)
T 3swr_A 610 GQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLV-VSFL-SYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLR 687 (1002)
T ss_dssp CCBCCCTTTCSEEEECCCCTTCCSSSCCCHHHHHHHTTSHH-HHHH-HHHHHHCCSEEEEEEEGGGGTTGGGHHHHHHHH
T ss_pred hhhcccCCCeeEEEEcCCCcchhhhCCCCCCcccchhhHHH-HHHH-HHHHHhCCCEEEEeccHHHhccCcchHHHHHHH
Confidence 1236899999988532 22111 11 1233 34566799877776663321 12345666666
Q ss_pred HHHh
Q psy4592 187 HCAS 190 (197)
Q Consensus 187 ~~~~ 190 (197)
.|.+
T Consensus 688 ~L~~ 691 (1002)
T 3swr_A 688 CLVR 691 (1002)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 6554
No 355
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=95.78 E-value=0.026 Score=45.09 Aligned_cols=98 Identities=16% Similarity=0.090 Sum_probs=62.6
Q ss_pred CCCCeEEEEeC--CchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEE-EcchHHHHhh-cCCce
Q psy4592 56 PNPKKVLIVGG--GDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVH-VGDGFRFMSE-HQQEF 131 (197)
Q Consensus 56 ~~~~~vLdiG~--G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~-~~d~~~~~~~-~~~~~ 131 (197)
..+++||.+|+ |.|..+..+++..+ .++++++.+++..+.+++. .. ..-+.+. ..+..+.+.. ..+.+
T Consensus 168 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G-a~V~~~~~~~~~~~~~~~~-g~------~~~~d~~~~~~~~~~~~~~~~~~~ 239 (347)
T 2hcy_A 168 MAGHWVAISGAAGGLGSLAVQYAKAMG-YRVLGIDGGEGKEELFRSI-GG------EVFIDFTKEKDIVGAVLKATDGGA 239 (347)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECSTTHHHHHHHT-TC------CEEEETTTCSCHHHHHHHHHTSCE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC-CcEEEEcCCHHHHHHHHHc-CC------ceEEecCccHhHHHHHHHHhCCCC
Confidence 45689999998 35556666665544 5899999998888877653 11 1001111 1233333332 12379
Q ss_pred eEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 132 DVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 132 D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
|+|+.+.. ....++.+.+.|+++|.++...
T Consensus 240 D~vi~~~g----------~~~~~~~~~~~l~~~G~iv~~g 269 (347)
T 2hcy_A 240 HGVINVSV----------SEAAIEASTRYVRANGTTVLVG 269 (347)
T ss_dssp EEEEECSS----------CHHHHHHHTTSEEEEEEEEECC
T ss_pred CEEEECCC----------cHHHHHHHHHHHhcCCEEEEEe
Confidence 99997652 1457788999999999998764
No 356
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=95.72 E-value=0.015 Score=46.52 Aligned_cols=91 Identities=14% Similarity=0.078 Sum_probs=62.0
Q ss_pred CCCCCeEEEEeCCc-hHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeE
Q psy4592 55 HPNPKKVLIVGGGD-GGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDV 133 (197)
Q Consensus 55 ~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~ 133 (197)
.+.+.+||.+|+|. |.++..+++..+ .++++++.+++-.+.+++. .. .. ++ .|... + .+.+|+
T Consensus 174 ~~~g~~VlV~GaG~vG~~a~qla~~~G-a~Vi~~~~~~~~~~~~~~l-Ga--------~~-v~-~~~~~-~---~~~~D~ 237 (348)
T 3two_A 174 VTKGTKVGVAGFGGLGSMAVKYAVAMG-AEVSVFARNEHKKQDALSM-GV--------KH-FY-TDPKQ-C---KEELDF 237 (348)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHTT-CEEEEECSSSTTHHHHHHT-TC--------SE-EE-SSGGG-C---CSCEEE
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHCC-CeEEEEeCCHHHHHHHHhc-CC--------Ce-ec-CCHHH-H---hcCCCE
Confidence 35678999999865 666667777655 5899999999998988773 21 11 22 33211 1 237999
Q ss_pred EEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 134 IITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 134 I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
|+-.... ...++.+.+.|+++|.+++..
T Consensus 238 vid~~g~----------~~~~~~~~~~l~~~G~iv~~G 265 (348)
T 3two_A 238 IISTIPT----------HYDLKDYLKLLTYNGDLALVG 265 (348)
T ss_dssp EEECCCS----------CCCHHHHHTTEEEEEEEEECC
T ss_pred EEECCCc----------HHHHHHHHHHHhcCCEEEEEC
Confidence 9865421 113577889999999999865
No 357
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=95.71 E-value=0.02 Score=46.17 Aligned_cols=97 Identities=19% Similarity=0.195 Sum_probs=63.7
Q ss_pred CCCCeEEEEe--CCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhh-cCCcee
Q psy4592 56 PNPKKVLIVG--GGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSE-HQQEFD 132 (197)
Q Consensus 56 ~~~~~vLdiG--~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~~~D 132 (197)
+.+++||.+| .|.|..+..+++..+ .++++++.+++-.+.+++. .. ..-+.....|..+.+.. ....+|
T Consensus 162 ~~g~~VlV~Ga~G~iG~~~~q~a~~~G-a~Vi~~~~~~~~~~~~~~~-Ga------~~~~~~~~~~~~~~~~~~~~~g~D 233 (362)
T 2c0c_A 162 SEGKKVLVTAAAGGTGQFAMQLSKKAK-CHVIGTCSSDEKSAFLKSL-GC------DRPINYKTEPVGTVLKQEYPEGVD 233 (362)
T ss_dssp CTTCEEEETTTTBTTHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHT-TC------SEEEETTTSCHHHHHHHHCTTCEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHhCC-CEEEEEECCHHHHHHHHHc-CC------cEEEecCChhHHHHHHHhcCCCCC
Confidence 5668999999 456777777777655 5899999999888888763 21 10011111233333332 235799
Q ss_pred EEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 133 VIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 133 ~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
+|+.... ...++.+.+.|+++|.+++..
T Consensus 234 ~vid~~g-----------~~~~~~~~~~l~~~G~iv~~g 261 (362)
T 2c0c_A 234 VVYESVG-----------GAMFDLAVDALATKGRLIVIG 261 (362)
T ss_dssp EEEECSC-----------THHHHHHHHHEEEEEEEEECC
T ss_pred EEEECCC-----------HHHHHHHHHHHhcCCEEEEEe
Confidence 9986552 136688899999999988764
No 358
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=95.70 E-value=0.014 Score=46.65 Aligned_cols=98 Identities=18% Similarity=0.279 Sum_probs=61.6
Q ss_pred CCCCeEEEEeCC--chHhHHHHhcCC-CCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhh-cC-Cc
Q psy4592 56 PNPKKVLIVGGG--DGGVAREVLKHP-SVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSE-HQ-QE 130 (197)
Q Consensus 56 ~~~~~vLdiG~G--~G~~~~~l~~~~-~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~~-~~ 130 (197)
.++++||.+|+| .|..+..+++.. + .++++++.+++..+.+++. .. ..-+.....+..+.+.. .. +.
T Consensus 169 ~~g~~vlV~Gagg~iG~~~~~~a~~~~G-a~Vi~~~~~~~~~~~~~~~-g~------~~~~~~~~~~~~~~~~~~~~~~~ 240 (347)
T 1jvb_A 169 DPTKTLLVVGAGGGLGTMAVQIAKAVSG-ATIIGVDVREEAVEAAKRA-GA------DYVINASMQDPLAEIRRITESKG 240 (347)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHTC-CEEEEEESSHHHHHHHHHH-TC------SEEEETTTSCHHHHHHHHTTTSC
T ss_pred CCCCEEEEECCCccHHHHHHHHHHHcCC-CeEEEEcCCHHHHHHHHHh-CC------CEEecCCCccHHHHHHHHhcCCC
Confidence 466899999997 344555555554 4 6899999999988888653 11 10011111222222222 22 47
Q ss_pred eeEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 131 FDVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 131 ~D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
+|+|+.+... ...++.+.+.|+++|.+++..
T Consensus 241 ~d~vi~~~g~----------~~~~~~~~~~l~~~G~iv~~g 271 (347)
T 1jvb_A 241 VDAVIDLNNS----------EKTLSVYPKALAKQGKYVMVG 271 (347)
T ss_dssp EEEEEESCCC----------HHHHTTGGGGEEEEEEEEECC
T ss_pred ceEEEECCCC----------HHHHHHHHHHHhcCCEEEEEC
Confidence 9999966521 346788889999999998754
No 359
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=95.68 E-value=0.011 Score=46.99 Aligned_cols=97 Identities=19% Similarity=0.267 Sum_probs=62.7
Q ss_pred CCCCeEEEEeC--CchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhc--CCce
Q psy4592 56 PNPKKVLIVGG--GDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEH--QQEF 131 (197)
Q Consensus 56 ~~~~~vLdiG~--G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~--~~~~ 131 (197)
..+++||.+|+ |.|..+..+++..+ .++++++.+++-++.+++. .. ..-+.....|..+.+... ...+
T Consensus 147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~~-ga------~~~~~~~~~~~~~~~~~~~~~~g~ 218 (334)
T 3qwb_A 147 KKGDYVLLFAAAGGVGLILNQLLKMKG-AHTIAVASTDEKLKIAKEY-GA------EYLINASKEDILRQVLKFTNGKGV 218 (334)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHT-TC------SEEEETTTSCHHHHHHHHTTTSCE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHc-CC------cEEEeCCCchHHHHHHHHhCCCCc
Confidence 45689999994 45556666666555 6899999999988888763 21 101111113333333321 3479
Q ss_pred eEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 132 DVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 132 D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
|+|+.+.. ...++.+.+.|+++|.+++..
T Consensus 219 D~vid~~g-----------~~~~~~~~~~l~~~G~iv~~G 247 (334)
T 3qwb_A 219 DASFDSVG-----------KDTFEISLAALKRKGVFVSFG 247 (334)
T ss_dssp EEEEECCG-----------GGGHHHHHHHEEEEEEEEECC
T ss_pred eEEEECCC-----------hHHHHHHHHHhccCCEEEEEc
Confidence 99986552 124678889999999998864
No 360
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=95.67 E-value=0.018 Score=45.54 Aligned_cols=97 Identities=13% Similarity=0.055 Sum_probs=62.9
Q ss_pred CCCCeEEEEeC--CchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhh-c-CCce
Q psy4592 56 PNPKKVLIVGG--GDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSE-H-QQEF 131 (197)
Q Consensus 56 ~~~~~vLdiG~--G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~-~~~~ 131 (197)
+++++||.+|+ |.|..+..+++..+ .++++++.+++-++.+++.-. ..-+.....|..+.+.. . ...+
T Consensus 139 ~~g~~VlV~Ga~g~iG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~~Ga-------~~~~~~~~~~~~~~~~~~~~~~g~ 210 (325)
T 3jyn_A 139 KPGEIILFHAAAGGVGSLACQWAKALG-AKLIGTVSSPEKAAHAKALGA-------WETIDYSHEDVAKRVLELTDGKKC 210 (325)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHT-CEEEEEESSHHHHHHHHHHTC-------SEEEETTTSCHHHHHHHHTTTCCE
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHcCC-------CEEEeCCCccHHHHHHHHhCCCCc
Confidence 45689999993 45666666666555 589999999998888876421 10111111233333332 2 3479
Q ss_pred eEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 132 DVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 132 D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
|+|+.+.. ...++.+.+.|+++|.+++..
T Consensus 211 Dvvid~~g-----------~~~~~~~~~~l~~~G~iv~~g 239 (325)
T 3jyn_A 211 PVVYDGVG-----------QDTWLTSLDSVAPRGLVVSFG 239 (325)
T ss_dssp EEEEESSC-----------GGGHHHHHTTEEEEEEEEECC
T ss_pred eEEEECCC-----------hHHHHHHHHHhcCCCEEEEEe
Confidence 99986552 124578889999999999875
No 361
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=95.65 E-value=0.033 Score=44.43 Aligned_cols=96 Identities=19% Similarity=0.185 Sum_probs=62.7
Q ss_pred CCCCeEEEEeC--CchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhh-c-CCce
Q psy4592 56 PNPKKVLIVGG--GDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSE-H-QQEF 131 (197)
Q Consensus 56 ~~~~~vLdiG~--G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~-~~~~ 131 (197)
+.+++||.+|+ |.|..+..+++..+ .++++++.+++-.+.+++.-. ..-+... .+..+.+.. . ...+
T Consensus 158 ~~g~~VlV~Gasg~iG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~~ga-------~~v~~~~-~~~~~~v~~~~~~~g~ 228 (342)
T 4eye_A 158 RAGETVLVLGAAGGIGTAAIQIAKGMG-AKVIAVVNRTAATEFVKSVGA-------DIVLPLE-EGWAKAVREATGGAGV 228 (342)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESSGGGHHHHHHHTC-------SEEEESS-TTHHHHHHHHTTTSCE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHhcCC-------cEEecCc-hhHHHHHHHHhCCCCc
Confidence 56689999997 45666667777655 599999999988888887421 1111111 343333333 2 2379
Q ss_pred eEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 132 DVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 132 D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
|+|+..... ..++.+.+.|+++|.+++..
T Consensus 229 Dvvid~~g~-----------~~~~~~~~~l~~~G~iv~~G 257 (342)
T 4eye_A 229 DMVVDPIGG-----------PAFDDAVRTLASEGRLLVVG 257 (342)
T ss_dssp EEEEESCC-------------CHHHHHHTEEEEEEEEEC-
T ss_pred eEEEECCch-----------hHHHHHHHhhcCCCEEEEEE
Confidence 999876531 13577889999999998754
No 362
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=95.65 E-value=0.013 Score=46.90 Aligned_cols=97 Identities=19% Similarity=0.222 Sum_probs=61.6
Q ss_pred CCCeEEEEeCCc-hHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhh-cCCceeEE
Q psy4592 57 NPKKVLIVGGGD-GGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSE-HQQEFDVI 134 (197)
Q Consensus 57 ~~~~vLdiG~G~-G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~~~D~I 134 (197)
.+.+||.+|+|. |..+..+++..+..++++++.+++-++.+++. .. . -+.....|..+.+.. ....+|+|
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a~------~-v~~~~~~~~~~~~~~~~~~g~D~v 235 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-AD------R-LVNPLEEDLLEVVRRVTGSGVEVL 235 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-CS------E-EECTTTSCHHHHHHHHHSSCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-HH------h-ccCcCccCHHHHHHHhcCCCCCEE
Confidence 567999999853 55566666655533899999998887777653 21 0 011111233332322 24579999
Q ss_pred EECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 135 ITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 135 ~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
+.... . ...++.+.+.|+++|.+++..
T Consensus 236 id~~g-----~-----~~~~~~~~~~l~~~G~iv~~g 262 (343)
T 2dq4_A 236 LEFSG-----N-----EAAIHQGLMALIPGGEARILG 262 (343)
T ss_dssp EECSC-----C-----HHHHHHHHHHEEEEEEEEECC
T ss_pred EECCC-----C-----HHHHHHHHHHHhcCCEEEEEe
Confidence 86542 1 456788999999999988764
No 363
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=95.56 E-value=0.019 Score=46.11 Aligned_cols=97 Identities=13% Similarity=0.065 Sum_probs=60.8
Q ss_pred CCCCeEEEEeC--CchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhh-c-CCce
Q psy4592 56 PNPKKVLIVGG--GDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSE-H-QQEF 131 (197)
Q Consensus 56 ~~~~~vLdiG~--G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~-~~~~ 131 (197)
+++++||..|+ |.|..+..+++..+ .++++++.+++-.+.+++. .. ..-+.....+..+.+.. . ...+
T Consensus 169 ~~g~~vlV~GasggiG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~~-ga------~~~~d~~~~~~~~~~~~~~~~~~~ 240 (351)
T 1yb5_A 169 KAGESVLVHGASGGVGLAACQIARAYG-LKILGTAGTEEGQKIVLQN-GA------HEVFNHREVNYIDKIKKYVGEKGI 240 (351)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHT-TC------SEEEETTSTTHHHHHHHHHCTTCE
T ss_pred CCcCEEEEECCCChHHHHHHHHHHHCC-CEEEEEeCChhHHHHHHHc-CC------CEEEeCCCchHHHHHHHHcCCCCc
Confidence 45689999997 44555555665544 6899999999888877653 11 00111111222222222 1 3479
Q ss_pred eEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 132 DVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 132 D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
|+|+.+.. ...++.+.+.|+++|.+++..
T Consensus 241 D~vi~~~G-----------~~~~~~~~~~l~~~G~iv~~g 269 (351)
T 1yb5_A 241 DIIIEMLA-----------NVNLSKDLSLLSHGGRVIVVG 269 (351)
T ss_dssp EEEEESCH-----------HHHHHHHHHHEEEEEEEEECC
T ss_pred EEEEECCC-----------hHHHHHHHHhccCCCEEEEEe
Confidence 99986652 235678889999999998754
No 364
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=95.56 E-value=0.029 Score=45.00 Aligned_cols=99 Identities=10% Similarity=0.052 Sum_probs=61.7
Q ss_pred CCC--CeEEEEeC--CchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhh-cCCc
Q psy4592 56 PNP--KKVLIVGG--GDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSE-HQQE 130 (197)
Q Consensus 56 ~~~--~~vLdiG~--G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~~ 130 (197)
..+ ++||..|+ |.|..+..+++..+..++++++.+++-.+.+++.+.. ...+.+...+..+.+.. ..+.
T Consensus 157 ~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~------~~~~d~~~~~~~~~~~~~~~~~ 230 (357)
T 2zb4_A 157 TAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGF------DAAINYKKDNVAEQLRESCPAG 230 (357)
T ss_dssp CTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCC------SEEEETTTSCHHHHHHHHCTTC
T ss_pred CCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCC------ceEEecCchHHHHHHHHhcCCC
Confidence 456 79999997 3444555555554423899999999888877764321 10111111233333332 2237
Q ss_pred eeEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 131 FDVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 131 ~D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
+|+++.+.- ...++.+.+.|+++|.+++..
T Consensus 231 ~d~vi~~~G-----------~~~~~~~~~~l~~~G~iv~~G 260 (357)
T 2zb4_A 231 VDVYFDNVG-----------GNISDTVISQMNENSHIILCG 260 (357)
T ss_dssp EEEEEESCC-----------HHHHHHHHHTEEEEEEEEECC
T ss_pred CCEEEECCC-----------HHHHHHHHHHhccCcEEEEEC
Confidence 999996652 246788899999999998754
No 365
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=95.40 E-value=0.02 Score=45.66 Aligned_cols=97 Identities=15% Similarity=0.148 Sum_probs=62.2
Q ss_pred CCCCeEEEEeC--CchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhh-c-CCce
Q psy4592 56 PNPKKVLIVGG--GDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSE-H-QQEF 131 (197)
Q Consensus 56 ~~~~~vLdiG~--G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~-~~~~ 131 (197)
..+++||.+|+ |.|..+..+++..+ .++++++.+++-++.+++. .. . .-+.....+..+.+.. . ...+
T Consensus 165 ~~g~~vlV~Gasg~iG~~~~~~a~~~G-~~Vi~~~~~~~~~~~~~~~-ga-----~-~~~d~~~~~~~~~~~~~~~~~~~ 236 (343)
T 2eih_A 165 RPGDDVLVMAAGSGVSVAAIQIAKLFG-ARVIATAGSEDKLRRAKAL-GA-----D-ETVNYTHPDWPKEVRRLTGGKGA 236 (343)
T ss_dssp CTTCEEEECSTTSTTHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHH-TC-----S-EEEETTSTTHHHHHHHHTTTTCE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHhc-CC-----C-EEEcCCcccHHHHHHHHhCCCCc
Confidence 45689999998 56666667776555 5899999999988888753 21 1 0011111232232322 1 2479
Q ss_pred eEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 132 DVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 132 D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
|+|+.+.. . ..++.+.+.|+++|.+++..
T Consensus 237 d~vi~~~g-----~------~~~~~~~~~l~~~G~~v~~g 265 (343)
T 2eih_A 237 DKVVDHTG-----A------LYFEGVIKATANGGRIAIAG 265 (343)
T ss_dssp EEEEESSC-----S------SSHHHHHHHEEEEEEEEESS
T ss_pred eEEEECCC-----H------HHHHHHHHhhccCCEEEEEe
Confidence 99997653 1 13477888999999988764
No 366
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=95.29 E-value=0.036 Score=44.44 Aligned_cols=97 Identities=22% Similarity=0.244 Sum_probs=62.0
Q ss_pred CCCCeEEEEeC--CchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhh-cCCcee
Q psy4592 56 PNPKKVLIVGG--GDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSE-HQQEFD 132 (197)
Q Consensus 56 ~~~~~vLdiG~--G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~~~D 132 (197)
+.+++||.+|+ |.|..+..+++..+ .++++++.+++-.+.+++.-. ..-+.....|..+.+.. ....+|
T Consensus 166 ~~g~~VlV~Gg~g~iG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~lGa-------~~~~~~~~~~~~~~~~~~~~~g~D 237 (353)
T 4dup_A 166 TEGESVLIHGGTSGIGTTAIQLARAFG-AEVYATAGSTGKCEACERLGA-------KRGINYRSEDFAAVIKAETGQGVD 237 (353)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHHTC-------SEEEETTTSCHHHHHHHHHSSCEE
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHhcCC-------CEEEeCCchHHHHHHHHHhCCCce
Confidence 45679999953 34666666666655 689999999998888877421 10111111233332222 245799
Q ss_pred EEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 133 VIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 133 ~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
+|+.+.. . ..++.+.+.|+++|.+++..
T Consensus 238 vvid~~g-----~------~~~~~~~~~l~~~G~iv~~g 265 (353)
T 4dup_A 238 IILDMIG-----A------AYFERNIASLAKDGCLSIIA 265 (353)
T ss_dssp EEEESCC-----G------GGHHHHHHTEEEEEEEEECC
T ss_pred EEEECCC-----H------HHHHHHHHHhccCCEEEEEE
Confidence 9986653 1 14577889999999988764
No 367
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=95.28 E-value=0.15 Score=41.08 Aligned_cols=101 Identities=20% Similarity=0.290 Sum_probs=58.7
Q ss_pred CCCeEEEEeCCchH-hHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 57 NPKKVLIVGGGDGG-VAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 57 ~~~~vLdiG~G~G~-~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
.+++|+.+|+|.=+ ....+++..+ .+|+++|.+++-++.+++.... .+.....+..++ ...-..+|+|+
T Consensus 166 ~~~~VlViGaGgvG~~aa~~a~~~G-a~V~v~dr~~~r~~~~~~~~~~--------~~~~~~~~~~~~-~~~~~~~DvVI 235 (361)
T 1pjc_A 166 KPGKVVILGGGVVGTEAAKMAVGLG-AQVQIFDINVERLSYLETLFGS--------RVELLYSNSAEI-ETAVAEADLLI 235 (361)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHGG--------GSEEEECCHHHH-HHHHHTCSEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCC-CEEEEEeCCHHHHHHHHHhhCc--------eeEeeeCCHHHH-HHHHcCCCEEE
Confidence 34799999985322 2233444445 4899999999888877665421 222232222221 11113589998
Q ss_pred ECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 136 TDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 136 ~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
.....+....+.+.. +...+.|+|+|+++...
T Consensus 236 ~~~~~~~~~~~~li~----~~~~~~~~~g~~ivdv~ 267 (361)
T 1pjc_A 236 GAVLVPGRRAPILVP----ASLVEQMRTGSVIVDVA 267 (361)
T ss_dssp ECCCCTTSSCCCCBC----HHHHTTSCTTCEEEETT
T ss_pred ECCCcCCCCCCeecC----HHHHhhCCCCCEEEEEe
Confidence 766543322233322 44567889999888755
No 368
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=95.24 E-value=0.15 Score=41.01 Aligned_cols=95 Identities=20% Similarity=0.115 Sum_probs=58.8
Q ss_pred CCCeEEEEeCCc-hHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 57 NPKKVLIVGGGD-GGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 57 ~~~~vLdiG~G~-G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
.+.+||.+|+|. |..+..+++..+ .++++++.+++-.+.+++.+.. ..-+-..+ .+.+....+.+|+|+
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~G-a~Vi~~~~~~~~~~~~~~~lGa--------~~v~~~~~-~~~~~~~~~~~D~vi 256 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAFG-SKVTVISTSPSKKEEALKNFGA--------DSFLVSRD-QEQMQAAAGTLDGII 256 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTT-CEEEEEESCGGGHHHHHHTSCC--------SEEEETTC-HHHHHHTTTCEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHhcCC--------ceEEeccC-HHHHHHhhCCCCEEE
Confidence 668999999753 444555666555 5899999999888877754431 11111122 122333235799998
Q ss_pred ECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 136 TDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 136 ~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
...... . .++.+.+.|+++|.++...
T Consensus 257 d~~g~~----~------~~~~~~~~l~~~G~iv~~g 282 (366)
T 1yqd_A 257 DTVSAV----H------PLLPLFGLLKSHGKLILVG 282 (366)
T ss_dssp ECCSSC----C------CSHHHHHHEEEEEEEEECC
T ss_pred ECCCcH----H------HHHHHHHHHhcCCEEEEEc
Confidence 665311 1 1256678899999988764
No 369
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=95.19 E-value=0.071 Score=42.67 Aligned_cols=109 Identities=11% Similarity=0.062 Sum_probs=68.0
Q ss_pred CCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCC-------C----------CCCCCCeEEEEcc
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMA-------V----------GLSDPRLTVHVGD 119 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~-------~----------~~~~~~~~~~~~d 119 (197)
....|+.+|||.......+....+...++-||. |++++.-++.++... . .+..++..++.+|
T Consensus 97 ~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~D 175 (334)
T 1rjd_A 97 EKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAACD 175 (334)
T ss_dssp SSEEEEEETCTTCCTHHHHHHHCTTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEECC
T ss_pred CCcEEEEeCCCCccHHHHhcCcCCCCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEecC
Confidence 346999999999998888775433344444444 888876666543210 0 0012578999999
Q ss_pred hHHH--H----hhc--CCceeEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEE
Q psy4592 120 GFRF--M----SEH--QQEFDVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCS 169 (197)
Q Consensus 120 ~~~~--~----~~~--~~~~D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~ 169 (197)
+++. + ... .....++++-....+.+... ...+++.+.+.. |+|.+++
T Consensus 176 L~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~--~~~ll~~ia~~~-~~~~~v~ 230 (334)
T 1rjd_A 176 LNDITETTRLLDVCTKREIPTIVISECLLCYMHNNE--SQLLINTIMSKF-SHGLWIS 230 (334)
T ss_dssp TTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHH--HHHHHHHHHHHC-SSEEEEE
T ss_pred CCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHH--HHHHHHHHHhhC-CCcEEEE
Confidence 8852 2 221 23456788777665554432 256788888777 7777653
No 370
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=95.15 E-value=0.084 Score=42.09 Aligned_cols=94 Identities=19% Similarity=0.238 Sum_probs=61.6
Q ss_pred CCCCeEEEEeC--CchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhh--cCCce
Q psy4592 56 PNPKKVLIVGG--GDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSE--HQQEF 131 (197)
Q Consensus 56 ~~~~~vLdiG~--G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~--~~~~~ 131 (197)
+.+.+||.+|+ |.|..+..+++..+ .+++++ .+++-++.+++.- . . .+. ...|..+.+.. ....+
T Consensus 149 ~~g~~VlV~Ga~g~iG~~~~q~a~~~G-a~Vi~~-~~~~~~~~~~~lG-a------~-~i~-~~~~~~~~~~~~~~~~g~ 217 (343)
T 3gaz_A 149 QDGQTVLIQGGGGGVGHVAIQIALARG-ARVFAT-ARGSDLEYVRDLG-A------T-PID-ASREPEDYAAEHTAGQGF 217 (343)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEE-ECHHHHHHHHHHT-S------E-EEE-TTSCHHHHHHHHHTTSCE
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCC-CEEEEE-eCHHHHHHHHHcC-C------C-Eec-cCCCHHHHHHHHhcCCCc
Confidence 56689999994 35666667777655 589898 8888888887642 1 1 122 22233333332 23479
Q ss_pred eEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 132 DVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 132 D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
|+|+-... ...++.+.+.|+++|.++...
T Consensus 218 D~vid~~g-----------~~~~~~~~~~l~~~G~iv~~g 246 (343)
T 3gaz_A 218 DLVYDTLG-----------GPVLDASFSAVKRFGHVVSCL 246 (343)
T ss_dssp EEEEESSC-----------THHHHHHHHHEEEEEEEEESC
T ss_pred eEEEECCC-----------cHHHHHHHHHHhcCCeEEEEc
Confidence 99986542 136688889999999998754
No 371
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=95.12 E-value=0.11 Score=42.29 Aligned_cols=108 Identities=19% Similarity=0.258 Sum_probs=57.7
Q ss_pred CCCeEEEEeCCchH-hHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCC--CCe-EEEE--cc-----hHHHHh
Q psy4592 57 NPKKVLIVGGGDGG-VAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSD--PRL-TVHV--GD-----GFRFMS 125 (197)
Q Consensus 57 ~~~~vLdiG~G~G~-~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~--~~~-~~~~--~d-----~~~~~~ 125 (197)
++.+|+.+|+|.=+ .+..+++..+ .+|+++|.+++..+.+++.-.... .++. ... .+.. .+ -.+.+.
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lG-a~V~v~D~~~~~l~~~~~lGa~~~-~l~~~~~~~~gya~~~~~~~~~~~~~~l~ 260 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLG-AKTTGYDVRPEVAEQVRSVGAQWL-DLGIDAAGEGGYARELSEAERAQQQQALE 260 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHT-CEEEEECSSGGGHHHHHHTTCEEC-CCC-------------CHHHHHHHHHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHcCCeEE-eccccccccccchhhhhHHHHhhhHHHHH
Confidence 46799999998533 3333444444 689999999988887766211000 0000 000 0000 00 011122
Q ss_pred hcCCceeEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEE
Q psy4592 126 EHQQEFDVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQ 170 (197)
Q Consensus 126 ~~~~~~D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~ 170 (197)
..-..+|+|+.....+....+.+.+ +++.+.+|||++++=.
T Consensus 261 e~l~~aDIVI~tv~iPg~~ap~Lvt----~emv~~MkpGsVIVDv 301 (381)
T 3p2y_A 261 DAITKFDIVITTALVPGRPAPRLVT----AAAATGMQPGSVVVDL 301 (381)
T ss_dssp HHHTTCSEEEECCCCTTSCCCCCBC----HHHHHTSCTTCEEEET
T ss_pred HHHhcCCEEEECCCCCCcccceeec----HHHHhcCCCCcEEEEE
Confidence 2235799999765444433445555 4556678888777654
No 372
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=95.12 E-value=0.026 Score=46.45 Aligned_cols=48 Identities=15% Similarity=0.252 Sum_probs=39.6
Q ss_pred CCCCeEEEEeCCchHhHHHHh-cCCC-CccEEEEEcCHHHHHHHHhhcCC
Q psy4592 56 PNPKKVLIVGGGDGGVAREVL-KHPS-VESAYLVEIDNRVIEVSKKYLPG 103 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~-~~~~-~~~v~~ve~~~~~~~~a~~~~~~ 103 (197)
+++..|+|+|++.|..+..++ +..+ ..+|+++|.+|...+..++++..
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~ 274 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRR 274 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHh
Confidence 456799999999999998877 4333 37999999999999999887653
No 373
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=95.05 E-value=0.49 Score=44.52 Aligned_cols=122 Identities=14% Similarity=0.120 Sum_probs=77.8
Q ss_pred CCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhh-----------
Q psy4592 58 PKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSE----------- 126 (197)
Q Consensus 58 ~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~----------- 126 (197)
..+++|+.||.|++...+...+-...+.++|+++...+..+.|++ ...++.+|+.+....
T Consensus 851 ~l~viDLFsG~GGlslGfe~AG~~~vv~avEid~~A~~ty~~N~p---------~~~~~~~DI~~l~~~~~~gdi~~~~~ 921 (1330)
T 3av4_A 851 KLRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNNP---------GTTVFTEDCNVLLKLVMAGEVTNSLG 921 (1330)
T ss_dssp CEEEEEETCTTSHHHHHHHHTTSEEEEEEECCSHHHHHHHHHHCT---------TSEEECSCHHHHHHHHTTTCSBCSSC
T ss_pred CceEEecccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhCC---------CCcEeeccHHHHhHhhhccchhhhhh
Confidence 458999999999999888766421468899999999998888864 345777887765421
Q ss_pred ----cCCceeEEEECCCCCC-CCCcc------------cccHHHHHHHHhhcCCCcEEEEEcCCCC--cChhHHHHHHHH
Q psy4592 127 ----HQQEFDVIITDSSDPV-GPAES------------LFQASYFELMSRALRPGGIVCSQAGTLW--YSLDCVGNTLQH 187 (197)
Q Consensus 127 ----~~~~~D~I~~~~~~~~-~~~~~------------l~~~~~~~~~~~~LkpgG~l~~~~~~~~--~~~~~~~~~~~~ 187 (197)
..+.+|+|+..+|... +.... |+ .+++ .+.+.++|.-+++=|+.... .....++.++..
T Consensus 922 ~~lp~~~~vDvl~GGpPCQ~FS~agr~~~~~~~d~R~~L~-~~~l-riv~~~rPk~fv~ENV~glls~~~g~~~~~il~~ 999 (1330)
T 3av4_A 922 QRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLV-VSFL-SYCDYYRPRFFLLENVRNFVSYRRSMVLKLTLRC 999 (1330)
T ss_dssp CBCCCTTTCSEEEECCCCTTTCSSSCCCHHHHHHHHHSHH-HHHH-HHHHHHCCSEEEEEEEGGGGTTTTTHHHHHHHHH
T ss_pred hhccccCccceEEecCCCcccccccccccccccchhhHHH-HHHH-HHHHHhcCcEEEEeccHHHhccCccHHHHHHHHH
Confidence 0136899999988633 22111 11 1233 34456799876666653321 123355666665
Q ss_pred HHh
Q psy4592 188 CAS 190 (197)
Q Consensus 188 ~~~ 190 (197)
|..
T Consensus 1000 L~~ 1002 (1330)
T 3av4_A 1000 LVR 1002 (1330)
T ss_dssp HHH
T ss_pred HHh
Confidence 554
No 374
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=94.96 E-value=0.23 Score=34.04 Aligned_cols=96 Identities=17% Similarity=0.180 Sum_probs=59.4
Q ss_pred CCeEEEEeCCchH-hH-HHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHH--Hhh-cCCcee
Q psy4592 58 PKKVLIVGGGDGG-VA-REVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRF--MSE-HQQEFD 132 (197)
Q Consensus 58 ~~~vLdiG~G~G~-~~-~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~-~~~~~D 132 (197)
..+|+.+|+|.=+ .. ..+.+. + ..++++|.+++.++.+++. .+.++.+|+.+. +.. ....+|
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~-g-~~v~vid~~~~~~~~~~~~-----------g~~~i~gd~~~~~~l~~a~i~~ad 73 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLAS-D-IPLVVIETSRTRVDELRER-----------GVRAVLGNAANEEIMQLAHLECAK 73 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHT-T-CCEEEEESCHHHHHHHHHT-----------TCEEEESCTTSHHHHHHTTGGGCS
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-C-CCEEEEECCHHHHHHHHHc-----------CCCEEECCCCCHHHHHhcCcccCC
Confidence 3589999997532 22 223333 3 6999999999988877651 356777876532 332 235789
Q ss_pred EEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEcCC
Q psy4592 133 VIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQAGT 173 (197)
Q Consensus 133 ~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~~~ 173 (197)
+|++..+. .. ....+-...+.+.|+..++.....
T Consensus 74 ~vi~~~~~-----~~--~n~~~~~~a~~~~~~~~iiar~~~ 107 (140)
T 3fwz_A 74 WLILTIPN-----GY--EAGEIVASARAKNPDIEIIARAHY 107 (140)
T ss_dssp EEEECCSC-----HH--HHHHHHHHHHHHCSSSEEEEEESS
T ss_pred EEEEECCC-----hH--HHHHHHHHHHHHCCCCeEEEEECC
Confidence 99977642 11 012234456677888888775543
No 375
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=94.96 E-value=0.11 Score=41.56 Aligned_cols=95 Identities=19% Similarity=0.137 Sum_probs=59.1
Q ss_pred CCCeEEEEeCCc-hHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 57 NPKKVLIVGGGD-GGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 57 ~~~~vLdiG~G~-G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
.+.+||.+|+|. |.++..+++..+ .++++++.+++-.+.+++.+.. +.+ +...+ .+.+....+.+|+|+
T Consensus 180 ~g~~VlV~GaG~vG~~a~qlak~~G-a~Vi~~~~~~~~~~~~~~~lGa-------~~v-i~~~~-~~~~~~~~~g~D~vi 249 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIAKAMG-HHVTVISSSNKKREEALQDLGA-------DDY-VIGSD-QAKMSELADSLDYVI 249 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHT-CEEEEEESSTTHHHHHHTTSCC-------SCE-EETTC-HHHHHHSTTTEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC-CeEEEEeCChHHHHHHHHHcCC-------cee-ecccc-HHHHHHhcCCCCEEE
Confidence 668999999753 444555666545 5899999999888887744431 111 11122 122333235799998
Q ss_pred ECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 136 TDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 136 ~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
-..... . .++.+.+.|+++|.++...
T Consensus 250 d~~g~~----~------~~~~~~~~l~~~G~iv~~G 275 (357)
T 2cf5_A 250 DTVPVH----H------ALEPYLSLLKLDGKLILMG 275 (357)
T ss_dssp ECCCSC----C------CSHHHHTTEEEEEEEEECS
T ss_pred ECCCCh----H------HHHHHHHHhccCCEEEEeC
Confidence 654211 1 2366778999999998764
No 376
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=94.95 E-value=0.11 Score=41.94 Aligned_cols=97 Identities=13% Similarity=0.162 Sum_probs=62.3
Q ss_pred CCCCeEEEEeCC--chHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhh-cCCcee
Q psy4592 56 PNPKKVLIVGGG--DGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSE-HQQEFD 132 (197)
Q Consensus 56 ~~~~~vLdiG~G--~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~~~D 132 (197)
..+.+||.+|++ .|.++..+++..+ .+++++ .+++-.+.+++.- . ..-+.....|..+.+.. ..+.+|
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~G-a~Vi~~-~~~~~~~~~~~lG-a------~~vi~~~~~~~~~~v~~~t~g~~d 233 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSG-YIPIAT-CSPHNFDLAKSRG-A------EEVFDYRAPNLAQTIRTYTKNNLR 233 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTT-CEEEEE-ECGGGHHHHHHTT-C------SEEEETTSTTHHHHHHHHTTTCCC
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCC-CEEEEE-eCHHHHHHHHHcC-C------cEEEECCCchHHHHHHHHccCCcc
Confidence 456799999983 6777777887655 577777 4888888887641 1 11122222344443333 344699
Q ss_pred EEEECCCCCCCCCcccccHHHHHHHHhhc-CCCcEEEEEc
Q psy4592 133 VIITDSSDPVGPAESLFQASYFELMSRAL-RPGGIVCSQA 171 (197)
Q Consensus 133 ~I~~~~~~~~~~~~~l~~~~~~~~~~~~L-kpgG~l~~~~ 171 (197)
+|+-..- . ...++.+.+.| +++|.++...
T Consensus 234 ~v~d~~g-----~-----~~~~~~~~~~l~~~~G~iv~~g 263 (371)
T 3gqv_A 234 YALDCIT-----N-----VESTTFCFAAIGRAGGHYVSLN 263 (371)
T ss_dssp EEEESSC-----S-----HHHHHHHHHHSCTTCEEEEESS
T ss_pred EEEECCC-----c-----hHHHHHHHHHhhcCCCEEEEEe
Confidence 9985442 1 45678888899 6999998754
No 377
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=94.94 E-value=0.039 Score=43.42 Aligned_cols=89 Identities=16% Similarity=0.169 Sum_probs=57.1
Q ss_pred CCCCCeEEEEeCCc-hHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeE
Q psy4592 55 HPNPKKVLIVGGGD-GGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDV 133 (197)
Q Consensus 55 ~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~ 133 (197)
.+.+.+||.+|+|. |.++..+++..+ .++++++ +++-.+.+++. .. -.++ .| .+.+ ...+|+
T Consensus 140 ~~~g~~VlV~GaG~vG~~a~qlak~~G-a~Vi~~~-~~~~~~~~~~l-Ga---------~~v~-~d-~~~v---~~g~Dv 202 (315)
T 3goh_A 140 LTKQREVLIVGFGAVNNLLTQMLNNAG-YVVDLVS-ASLSQALAAKR-GV---------RHLY-RE-PSQV---TQKYFA 202 (315)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHHT-CEEEEEC-SSCCHHHHHHH-TE---------EEEE-SS-GGGC---CSCEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-CEEEEEE-ChhhHHHHHHc-CC---------CEEE-cC-HHHh---CCCccE
Confidence 35678999999953 566677777655 5999999 88888888774 11 1112 24 2212 467999
Q ss_pred EEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 134 IITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 134 I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
|+-.... ..+..+.+.|+++|.++...
T Consensus 203 v~d~~g~-----------~~~~~~~~~l~~~G~~v~~g 229 (315)
T 3goh_A 203 IFDAVNS-----------QNAAALVPSLKANGHIICIQ 229 (315)
T ss_dssp EECC------------------TTGGGEEEEEEEEEEC
T ss_pred EEECCCc-----------hhHHHHHHHhcCCCEEEEEe
Confidence 9854321 12255678999999988764
No 378
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=94.92 E-value=0.037 Score=43.89 Aligned_cols=97 Identities=16% Similarity=0.174 Sum_probs=61.3
Q ss_pred CCCCeEEEEeC--CchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhh-c-CCce
Q psy4592 56 PNPKKVLIVGG--GDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSE-H-QQEF 131 (197)
Q Consensus 56 ~~~~~vLdiG~--G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~-~~~~ 131 (197)
+.+++||..|+ |.|.....+++..+ .++++++.+++-.+.+++. .. ..-+.....+..+.+.. . ...+
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G-~~Vi~~~~~~~~~~~~~~~-g~------~~~~d~~~~~~~~~i~~~~~~~~~ 215 (333)
T 1wly_A 144 KPGDYVLIHAAAGGMGHIMVPWARHLG-ATVIGTVSTEEKAETARKL-GC------HHTINYSTQDFAEVVREITGGKGV 215 (333)
T ss_dssp CTTCEEEETTTTSTTHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHH-TC------SEEEETTTSCHHHHHHHHHTTCCE
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHc-CC------CEEEECCCHHHHHHHHHHhCCCCC
Confidence 45679999995 56666666666555 6899999999888887663 21 10011111222222222 1 3469
Q ss_pred eEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 132 DVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 132 D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
|+++.+... ..++.+.+.|+++|.++...
T Consensus 216 d~vi~~~g~-----------~~~~~~~~~l~~~G~iv~~g 244 (333)
T 1wly_A 216 DVVYDSIGK-----------DTLQKSLDCLRPRGMCAAYG 244 (333)
T ss_dssp EEEEECSCT-----------TTHHHHHHTEEEEEEEEECC
T ss_pred eEEEECCcH-----------HHHHHHHHhhccCCEEEEEe
Confidence 999966531 14578889999999988764
No 379
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=94.92 E-value=0.076 Score=42.35 Aligned_cols=96 Identities=19% Similarity=0.235 Sum_probs=61.9
Q ss_pred CCCeEEEEe-CC-chHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhh-cCCceeE
Q psy4592 57 NPKKVLIVG-GG-DGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSE-HQQEFDV 133 (197)
Q Consensus 57 ~~~~vLdiG-~G-~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~~~D~ 133 (197)
.+.+||.+| +| .|.++..+++..+ .++++++.+++-.+.+++.-. + .-+.. ..|..+.+.. ....+|+
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~G-a~Vi~~~~~~~~~~~~~~lGa------~-~vi~~-~~~~~~~~~~~~~~g~Dv 220 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYG-LRVITTASRNETIEWTKKMGA------D-IVLNH-KESLLNQFKTQGIELVDY 220 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTT-CEEEEECCSHHHHHHHHHHTC------S-EEECT-TSCHHHHHHHHTCCCEEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHhcCC------c-EEEEC-CccHHHHHHHhCCCCccE
Confidence 567999995 33 4556666776655 599999999998888887421 0 00100 0133333322 2457999
Q ss_pred EEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 134 IITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 134 I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
|+.... ....++.+.+.|+++|.++...
T Consensus 221 v~d~~g----------~~~~~~~~~~~l~~~G~iv~~~ 248 (346)
T 3fbg_A 221 VFCTFN----------TDMYYDDMIQLVKPRGHIATIV 248 (346)
T ss_dssp EEESSC----------HHHHHHHHHHHEEEEEEEEESS
T ss_pred EEECCC----------chHHHHHHHHHhccCCEEEEEC
Confidence 986441 1456788999999999997653
No 380
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=94.91 E-value=0.054 Score=43.39 Aligned_cols=97 Identities=15% Similarity=0.150 Sum_probs=60.1
Q ss_pred CCCCeEEEEeC--CchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhh-c-CCce
Q psy4592 56 PNPKKVLIVGG--GDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSE-H-QQEF 131 (197)
Q Consensus 56 ~~~~~vLdiG~--G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~-~~~~ 131 (197)
+.+++||..|+ |.|..+..+++..+ .++++++.+++-++.+++. .. ..-+.....+..+.+.. . ...+
T Consensus 161 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~~-g~------~~~~~~~~~~~~~~~~~~~~~~~~ 232 (354)
T 2j8z_A 161 QAGDYVLIHAGLSGVGTAAIQLTRMAG-AIPLVTAGSQKKLQMAEKL-GA------AAGFNYKKEDFSEATLKFTKGAGV 232 (354)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHH-TC------SEEEETTTSCHHHHHHHHTTTSCE
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHc-CC------cEEEecCChHHHHHHHHHhcCCCc
Confidence 45679999984 45555555665544 6899999999888888553 21 00011111222232322 1 2469
Q ss_pred eEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 132 DVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 132 D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
|+++.+... ..++.+.+.|+++|.+++..
T Consensus 233 d~vi~~~G~-----------~~~~~~~~~l~~~G~iv~~G 261 (354)
T 2j8z_A 233 NLILDCIGG-----------SYWEKNVNCLALDGRWVLYG 261 (354)
T ss_dssp EEEEESSCG-----------GGHHHHHHHEEEEEEEEECC
T ss_pred eEEEECCCc-----------hHHHHHHHhccCCCEEEEEe
Confidence 999876531 13577789999999998864
No 381
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=94.84 E-value=0.027 Score=44.57 Aligned_cols=97 Identities=13% Similarity=0.057 Sum_probs=60.3
Q ss_pred CCCCeEEEEeC--CchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhh-c-CCce
Q psy4592 56 PNPKKVLIVGG--GDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSE-H-QQEF 131 (197)
Q Consensus 56 ~~~~~vLdiG~--G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~-~~~~ 131 (197)
+.+++||..|+ |.|.....+++..+ .++++++.+++..+.+++. .. ..-+.....+..+.+.. . ...+
T Consensus 139 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G-~~V~~~~~~~~~~~~~~~~-g~------~~~~~~~~~~~~~~~~~~~~~~~~ 210 (327)
T 1qor_A 139 KPDEQFLFHAAAGGVGLIACQWAKALG-AKLIGTVGTAQKAQSALKA-GA------WQVINYREEDLVERLKEITGGKKV 210 (327)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHHT-CEEEEEESSHHHHHHHHHH-TC------SEEEETTTSCHHHHHHHHTTTCCE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHc-CC------CEEEECCCccHHHHHHHHhCCCCc
Confidence 45689999994 44555555555444 5899999999888888763 21 00011111222222222 1 3469
Q ss_pred eEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 132 DVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 132 D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
|+++.+.. ...++.+.+.|+++|.+++..
T Consensus 211 D~vi~~~g-----------~~~~~~~~~~l~~~G~iv~~g 239 (327)
T 1qor_A 211 RVVYDSVG-----------RDTWERSLDCLQRRGLMVSFG 239 (327)
T ss_dssp EEEEECSC-----------GGGHHHHHHTEEEEEEEEECC
T ss_pred eEEEECCc-----------hHHHHHHHHHhcCCCEEEEEe
Confidence 99997652 124578889999999998764
No 382
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=94.77 E-value=0.6 Score=39.13 Aligned_cols=108 Identities=15% Similarity=0.191 Sum_probs=63.3
Q ss_pred CCCeEEEEeCCchHhH--HHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCC-CCCC--------CCCeEEEEcchHHHHh
Q psy4592 57 NPKKVLIVGGGDGGVA--REVLKHPSVESAYLVEIDNRVIEVSKKYLPGMA-VGLS--------DPRLTVHVGDGFRFMS 125 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~--~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~-~~~~--------~~~~~~~~~d~~~~~~ 125 (197)
...+|..||+|.-+.. ..+++.+ .+|+++|++++.++..++...... .++. ..++.+ ..|..+.+.
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~~G--~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~-ttd~~~a~~ 83 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLADIG--HDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRF-STDIEAAVA 83 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEE-ECCHHHHHH
T ss_pred CCceEEEECcCHHHHHHHHHHHhCC--CEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEE-ECCHHHHhh
Confidence 4579999999964443 3344443 589999999999888776421110 0000 112332 345443333
Q ss_pred hcCCceeEEEECCCCCCCCC--ccc-ccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 126 EHQQEFDVIITDSSDPVGPA--ESL-FQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 126 ~~~~~~D~I~~~~~~~~~~~--~~l-~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
..|+|+...+.+...+ +.+ ...+.++.+...|+++..++..+
T Consensus 84 ----~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~iVV~~S 128 (478)
T 2y0c_A 84 ----HGDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVIVDKS 128 (478)
T ss_dssp ----HCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECS
T ss_pred ----cCCEEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCCCCEEEEeC
Confidence 3799999876543211 111 12567778888999877665543
No 383
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=94.72 E-value=0.018 Score=46.27 Aligned_cols=97 Identities=24% Similarity=0.279 Sum_probs=59.1
Q ss_pred CCCCeEEEEeCCc-hHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchH-HHHhhcCCceeE
Q psy4592 56 PNPKKVLIVGGGD-GGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGF-RFMSEHQQEFDV 133 (197)
Q Consensus 56 ~~~~~vLdiG~G~-G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~~~D~ 133 (197)
..+.+||.+|+|. |.++..+++..+ .++++++.+++-++.+++. .. . .++..+-. ++...-.+.+|+
T Consensus 178 ~~g~~VlV~GaG~vG~~~~qlak~~G-a~Vi~~~~~~~~~~~~~~l-Ga--------~-~v~~~~~~~~~~~~~~~~~D~ 246 (360)
T 1piw_A 178 GPGKKVGIVGLGGIGSMGTLISKAMG-AETYVISRSSRKREDAMKM-GA--------D-HYIATLEEGDWGEKYFDTFDL 246 (360)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHHT-CEEEEEESSSTTHHHHHHH-TC--------S-EEEEGGGTSCHHHHSCSCEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCC-CEEEEEcCCHHHHHHHHHc-CC--------C-EEEcCcCchHHHHHhhcCCCE
Confidence 4568999999853 556666666555 5799999999888888763 21 1 11211111 122221247999
Q ss_pred EEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 134 IITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 134 I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
|+....... . ..++.+.+.|+++|.++...
T Consensus 247 vid~~g~~~---~-----~~~~~~~~~l~~~G~iv~~g 276 (360)
T 1piw_A 247 IVVCASSLT---D-----IDFNIMPKAMKVGGRIVSIS 276 (360)
T ss_dssp EEECCSCST---T-----CCTTTGGGGEEEEEEEEECC
T ss_pred EEECCCCCc---H-----HHHHHHHHHhcCCCEEEEec
Confidence 986653200 0 12255678999999988753
No 384
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=94.72 E-value=0.021 Score=44.45 Aligned_cols=67 Identities=15% Similarity=0.137 Sum_probs=45.3
Q ss_pred CCceeEEEECCCCCCCCCc-cc-cc-----HHHHHHHHhhcCCCcEEEEEcCCCCcChhHHHHHHHHHHhhCCccc
Q psy4592 128 QQEFDVIITDSSDPVGPAE-SL-FQ-----ASYFELMSRALRPGGIVCSQAGTLWYSLDCVGNTLQHCASVFPRLH 196 (197)
Q Consensus 128 ~~~~D~I~~~~~~~~~~~~-~l-~~-----~~~~~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~f~~v~ 196 (197)
.++||+|++|+.-+..... +. .+ .-.++.+.++|+|||.|++-.... .....+.+...+++.|..|+
T Consensus 204 ~~k~DvV~SDMApn~sGh~yqQC~DHarii~Lal~fA~~vLkPGGtfV~Kvygg--aDr~se~lv~~LaR~F~~Vr 277 (320)
T 2hwk_A 204 VPKYDIIFVNVRTPYKYHHYQQCEDHAIKLSMLTKKACLHLNPGGTCVSIGYGY--ADRASESIIGAIARQFKFSR 277 (320)
T ss_dssp SCCEEEEEEECCCCCCSCHHHHHHHHHHHHHHTHHHHGGGEEEEEEEEEEECCC--CSHHHHHHHHHHHTTEEEEE
T ss_pred cCcCCEEEEcCCCCCCCccccccchHHHHHHHHHHHHHHhcCCCceEEEEEecC--CcccHHHHHHHHHHhcceee
Confidence 3679999999876554333 20 00 115667789999999999865331 12255777888888887775
No 385
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=94.66 E-value=0.029 Score=44.58 Aligned_cols=46 Identities=15% Similarity=0.155 Sum_probs=38.6
Q ss_pred CCCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCH---HHHHHHHhhcCC
Q psy4592 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDN---RVIEVSKKYLPG 103 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~---~~~~~a~~~~~~ 103 (197)
.++..|||.-||+|..+.++.+.. .+.+++|+++ ..++.+++++..
T Consensus 241 ~~~~~vlDpF~GsGtt~~aa~~~~--r~~ig~e~~~~~~~~~~~~~~Rl~~ 289 (319)
T 1eg2_A 241 HPGSTVLDFFAGSGVTARVAIQEG--RNSICTDAAPVFKEYYQKQLTFLQD 289 (319)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHHT--CEEEEEESSTHHHHHHHHHHHHC--
T ss_pred CCCCEEEecCCCCCHHHHHHHHcC--CcEEEEECCccHHHHHHHHHHHHHH
Confidence 566799999999999988877664 5899999999 999999998764
No 386
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=94.61 E-value=0.097 Score=43.29 Aligned_cols=97 Identities=19% Similarity=0.156 Sum_probs=61.0
Q ss_pred CCCCeEEEEeC--CchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcc--------------
Q psy4592 56 PNPKKVLIVGG--GDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGD-------------- 119 (197)
Q Consensus 56 ~~~~~vLdiG~--G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d-------------- 119 (197)
..+++||.+|+ |.|..+..+++..+ .++++++.+++-++.+++. .. ..-+.....|
T Consensus 219 ~~g~~VlV~GasG~iG~~a~qla~~~G-a~vi~~~~~~~~~~~~~~l-Ga------~~~i~~~~~~~~~~~~~~~~~~~~ 290 (447)
T 4a0s_A 219 KQGDIVLIWGASGGLGSYAIQFVKNGG-GIPVAVVSSAQKEAAVRAL-GC------DLVINRAELGITDDIADDPRRVVE 290 (447)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHT-TC------CCEEEHHHHTCCTTGGGCHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHhc-CC------CEEEecccccccccccccccccch
Confidence 55689999997 34556666666655 6888889999988888663 21 1111111111
Q ss_pred -----hHHHHhhcCCceeEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 120 -----GFRFMSEHQQEFDVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 120 -----~~~~~~~~~~~~D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
...........+|+|+.... ...++.+.+.|+++|.+++..
T Consensus 291 ~~~~~~~~v~~~~g~g~Dvvid~~G-----------~~~~~~~~~~l~~~G~iv~~G 336 (447)
T 4a0s_A 291 TGRKLAKLVVEKAGREPDIVFEHTG-----------RVTFGLSVIVARRGGTVVTCG 336 (447)
T ss_dssp HHHHHHHHHHHHHSSCCSEEEECSC-----------HHHHHHHHHHSCTTCEEEESC
T ss_pred hhhHHHHHHHHHhCCCceEEEECCC-----------chHHHHHHHHHhcCCEEEEEe
Confidence 11111112457999986542 235688889999999998864
No 387
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=94.56 E-value=0.16 Score=40.09 Aligned_cols=113 Identities=13% Similarity=0.104 Sum_probs=71.6
Q ss_pred CCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhc--CCce---
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEH--QQEF--- 131 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~--~~~~--- 131 (197)
....|++||||.=.....+.. .....++-|| .|.+++..++.+...+ .....+..++.+|+++.+... ...|
T Consensus 102 g~~QvV~LGaGlDTra~Rl~~-~~~~~v~evD-~P~vi~~k~~lL~~~~-~~~~~~~~~v~~Dl~d~~~~~l~~~g~d~~ 178 (310)
T 2uyo_A 102 GIRQFVILASGLDSRAYRLDW-PTGTTVYEID-QPKVLAYKSTTLAEHG-VTPTADRREVPIDLRQDWPPALRSAGFDPS 178 (310)
T ss_dssp TCCEEEEETCTTCCHHHHSCC-CTTCEEEEEE-CHHHHHHHHHHHHHTT-CCCSSEEEEEECCTTSCHHHHHHHTTCCTT
T ss_pred CCCeEEEeCCCCCchhhhccC-CCCcEEEEcC-CHHHHHHHHHHHHhcC-CCCCCCeEEEecchHhhHHHHHHhccCCCC
Confidence 346899999998766555442 2236777777 4999988888764211 112457888999987522111 1112
Q ss_pred --eEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEcCCC
Q psy4592 132 --DVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQAGTL 174 (197)
Q Consensus 132 --D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~~~~ 174 (197)
=++++....++.+... ...+++.+.+.+.||+.+++....+
T Consensus 179 ~Pt~~i~Egvl~Yl~~~~--~~~ll~~l~~~~~~gs~l~~d~~~~ 221 (310)
T 2uyo_A 179 ARTAWLAEGLLMYLPATA--QDGLFTEIGGLSAVGSRIAVETSPL 221 (310)
T ss_dssp SCEEEEECSCGGGSCHHH--HHHHHHHHHHTCCTTCEEEEECCCT
T ss_pred CCEEEEEechHhhCCHHH--HHHHHHHHHHhCCCCeEEEEEecCC
Confidence 2555555555544332 2678899999999999999876544
No 388
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=94.24 E-value=0.083 Score=41.23 Aligned_cols=93 Identities=12% Similarity=0.038 Sum_probs=59.8
Q ss_pred CCCCCeEEEEeC--CchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcch-HHHHhhcCCce
Q psy4592 55 HPNPKKVLIVGG--GDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDG-FRFMSEHQQEF 131 (197)
Q Consensus 55 ~~~~~~vLdiG~--G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~~~ 131 (197)
.+.+++||.+|+ |.|..+..+++..+ .++++++.+++-.+.+++. .. . .++..+- .++... -..+
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~~-ga--------~-~~~~~~~~~~~~~~-~~~~ 190 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAMG-LRVLAAASRPEKLALPLAL-GA--------E-EAATYAEVPERAKA-WGGL 190 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTT-CEEEEEESSGGGSHHHHHT-TC--------S-EEEEGGGHHHHHHH-TTSE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHhc-CC--------C-EEEECCcchhHHHH-hcCc
Confidence 356689999997 44566666666655 5899999999888888652 21 1 1222111 222222 2579
Q ss_pred eEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 132 DVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 132 D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
|+|+. ... ..++.+.+.|+++|.++...
T Consensus 191 d~vid-~g~-----------~~~~~~~~~l~~~G~~v~~g 218 (302)
T 1iz0_A 191 DLVLE-VRG-----------KEVEESLGLLAHGGRLVYIG 218 (302)
T ss_dssp EEEEE-CSC-----------TTHHHHHTTEEEEEEEEEC-
T ss_pred eEEEE-CCH-----------HHHHHHHHhhccCCEEEEEe
Confidence 99996 421 13578889999999988754
No 389
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=93.95 E-value=0.46 Score=38.90 Aligned_cols=42 Identities=21% Similarity=0.298 Sum_probs=29.7
Q ss_pred CCCeEEEEeCCchH-hHHHHhcCCCCccEEEEEcCHHHHHHHHh
Q psy4592 57 NPKKVLIVGGGDGG-VAREVLKHPSVESAYLVEIDNRVIEVSKK 99 (197)
Q Consensus 57 ~~~~vLdiG~G~G~-~~~~l~~~~~~~~v~~ve~~~~~~~~a~~ 99 (197)
.+.+|+.+|+|.=+ .+..+++..+ ..|+++|.+++..+.+++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~G-a~V~v~D~~~~~~~~~~~ 213 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSLG-AIVRAFDTRPEVKEQVQS 213 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT-CEEEEECSCGGGHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC-CEEEEEcCCHHHHHHHHH
Confidence 36799999997533 2333444455 589999999988777654
No 390
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=93.92 E-value=0.79 Score=38.08 Aligned_cols=106 Identities=17% Similarity=0.197 Sum_probs=61.0
Q ss_pred CeEEEEeCCchHhHHH--HhcCCCCccEEEEEcCHHHHHHHHhhcCCCC-CCCC--------CCCeEEEEcchHHHHhhc
Q psy4592 59 KKVLIVGGGDGGVARE--VLKHPSVESAYLVEIDNRVIEVSKKYLPGMA-VGLS--------DPRLTVHVGDGFRFMSEH 127 (197)
Q Consensus 59 ~~vLdiG~G~G~~~~~--l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~-~~~~--------~~~~~~~~~d~~~~~~~~ 127 (197)
.+|..||+|.=+...+ +++.+ .+|+++|.+++.++..++...... .++. ..++++ ..|..+.+
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G--~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~-t~d~~ea~--- 76 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELG--ANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRF-GTEIEQAV--- 76 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEE-ESCHHHHG---
T ss_pred CEEEEECcCHHHHHHHHHHHhcC--CEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEE-ECCHHHHH---
Confidence 4788999885443333 33342 689999999998887766322110 0000 123433 34544433
Q ss_pred CCceeEEEECCCCCCCCC--ccc-ccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 128 QQEFDVIITDSSDPVGPA--ESL-FQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 128 ~~~~D~I~~~~~~~~~~~--~~l-~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
...|+|+...+.+...+ +.+ .-.+.++.+.+.|++|-.++..+
T Consensus 77 -~~aDvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~S 122 (450)
T 3gg2_A 77 -PEADIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKS 122 (450)
T ss_dssp -GGCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECS
T ss_pred -hcCCEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEee
Confidence 34799999876543211 111 12566778888898877666544
No 391
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=93.82 E-value=0.51 Score=38.23 Aligned_cols=98 Identities=17% Similarity=0.312 Sum_probs=57.7
Q ss_pred CCCeEEEEeCCchH-hHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEc---chHHHHhhcCCcee
Q psy4592 57 NPKKVLIVGGGDGG-VAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVG---DGFRFMSEHQQEFD 132 (197)
Q Consensus 57 ~~~~vLdiG~G~G~-~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~---d~~~~~~~~~~~~D 132 (197)
.+++|+.+|+|.=+ ....+++..+ .+|+++|.+++-++.+++.+.. .+..... +..+.+ ..+|
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~G-a~V~~~d~~~~~l~~~~~~~g~--------~~~~~~~~~~~l~~~l----~~aD 233 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMG-ATVTVLDINIDKLRQLDAEFCG--------RIHTRYSSAYELEGAV----KRAD 233 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHTTT--------SSEEEECCHHHHHHHH----HHCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCC-CEEEEEeCCHHHHHHHHHhcCC--------eeEeccCCHHHHHHHH----cCCC
Confidence 46799999985322 2222333444 5899999999888777765431 1222222 222222 3589
Q ss_pred EEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 133 VIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 133 ~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
+|+.....+....+.+.. +.+.+.|||||+++..+
T Consensus 234 vVi~~~~~p~~~t~~li~----~~~l~~mk~g~~iV~va 268 (377)
T 2vhw_A 234 LVIGAVLVPGAKAPKLVS----NSLVAHMKPGAVLVDIA 268 (377)
T ss_dssp EEEECCCCTTSCCCCCBC----HHHHTTSCTTCEEEEGG
T ss_pred EEEECCCcCCCCCcceec----HHHHhcCCCCcEEEEEe
Confidence 999865433322223332 45667889999887654
No 392
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=93.79 E-value=0.33 Score=39.84 Aligned_cols=109 Identities=18% Similarity=0.259 Sum_probs=59.4
Q ss_pred CCCeEEEEeCCchH-hHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCC------CCCeE-EEE--cch-----H
Q psy4592 57 NPKKVLIVGGGDGG-VAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLS------DPRLT-VHV--GDG-----F 121 (197)
Q Consensus 57 ~~~~vLdiG~G~G~-~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~------~~~~~-~~~--~d~-----~ 121 (197)
.+.+|+.+|+|.=+ .+..+++..+ ..|+++|.++...+.+++.-.... ... ..... +.. .+- .
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lG-a~V~v~D~~~~~l~~~~~~G~~~~-~~~~~~~~d~~~~~~ya~e~s~~~~~~~~ 266 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLG-AVVSATDVRPAAKEQVASLGAKFI-AVEDEEFKAAETAGGYAKEMSGEYQVKQA 266 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT-CEEEEECSSTTHHHHHHHTTCEEC-CCCC-----------------CHHHHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCC-CEEEEEcCCHHHHHHHHHcCCcee-ecccccccccccccchhhhcchhhhhhhH
Confidence 45799999998533 3333445444 689999999988887776311000 000 00000 110 000 0
Q ss_pred HHHhhcCCceeEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 122 RFMSEHQQEFDVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 122 ~~~~~~~~~~D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
..+...-...|+|+.....+....+.+.+ +++.+.+|||.+++=.+
T Consensus 267 ~~l~e~l~~aDVVI~tvlipg~~ap~Lvt----~emv~~Mk~GsVIVDvA 312 (405)
T 4dio_A 267 ALVAEHIAKQDIVITTALIPGRPAPRLVT----REMLDSMKPGSVVVDLA 312 (405)
T ss_dssp HHHHHHHHTCSEEEECCCCSSSCCCCCBC----HHHHTTSCTTCEEEETT
T ss_pred hHHHHHhcCCCEEEECCcCCCCCCCEEec----HHHHhcCCCCCEEEEEe
Confidence 11222124689999875544444555655 45666888888777544
No 393
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=93.73 E-value=0.16 Score=40.56 Aligned_cols=95 Identities=12% Similarity=0.042 Sum_probs=55.3
Q ss_pred CCCCeEEEEeCC--chHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhh-cCCcee
Q psy4592 56 PNPKKVLIVGGG--DGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSE-HQQEFD 132 (197)
Q Consensus 56 ~~~~~vLdiG~G--~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~~~D 132 (197)
+.+.+||..|++ .|.++..+++..+...+++++ +++-.+.++ +.. ..-+. ...|..+.+.. ..+.+|
T Consensus 141 ~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~--~ga------~~~~~-~~~~~~~~~~~~~~~g~D 210 (349)
T 4a27_A 141 REGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK--DSV------THLFD-RNADYVQEVKRISAEGVD 210 (349)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG--GGS------SEEEE-TTSCHHHHHHHHCTTCEE
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH--cCC------cEEEc-CCccHHHHHHHhcCCCce
Confidence 566899999983 456666777765556888887 555556665 221 11111 12233333332 345799
Q ss_pred EEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 133 VIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 133 ~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
+|+-... ...++.+.+.|+++|.+++..
T Consensus 211 vv~d~~g-----------~~~~~~~~~~l~~~G~~v~~G 238 (349)
T 4a27_A 211 IVLDCLC-----------GDNTGKGLSLLKPLGTYILYG 238 (349)
T ss_dssp EEEEECC------------------CTTEEEEEEEEEEC
T ss_pred EEEECCC-----------chhHHHHHHHhhcCCEEEEEC
Confidence 9986542 112366789999999999765
No 394
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=93.66 E-value=0.4 Score=38.89 Aligned_cols=109 Identities=22% Similarity=0.288 Sum_probs=55.8
Q ss_pred CCCeEEEEeCCchHh-HHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCC----------eEEEEcc----hH
Q psy4592 57 NPKKVLIVGGGDGGV-AREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPR----------LTVHVGD----GF 121 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~-~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~----------~~~~~~d----~~ 121 (197)
.+.+|+.+|+|.=+. +..+++..+ .+|+++|.++...+.+++ +.......+... .+....| ..
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~G-a~V~~~d~~~~~~~~~~~-~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~ 248 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLG-AVVMATDVRAATKEQVES-LGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQA 248 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT-CEEEEECSCSTTHHHHHH-TTCEECCC-----------------------CCHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHH-cCCeEEeecccccccccccccchhhcCHHHHhhhH
Confidence 467999999975333 333444455 579999999887776665 321000000000 0000000 01
Q ss_pred HHHhhcCCceeEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 122 RFMSEHQQEFDVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 122 ~~~~~~~~~~D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
+.+......+|+|+.....+..+.+.+.+ ++..+.|||||+++-..
T Consensus 249 ~~l~~~~~~aDvVi~~~~~pg~~~~~li~----~~~l~~mk~g~vivdva 294 (384)
T 1l7d_A 249 EAVLKELVKTDIAITTALIPGKPAPVLIT----EEMVTKMKPGSVIIDLA 294 (384)
T ss_dssp HHHHHHHTTCSEEEECCCCTTSCCCCCSC----HHHHTTSCTTCEEEETT
T ss_pred HHHHHHhCCCCEEEECCccCCCCCCeeeC----HHHHhcCCCCCEEEEEe
Confidence 11222224589999765333322333333 44566789999887654
No 395
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=93.59 E-value=0.061 Score=43.26 Aligned_cols=93 Identities=17% Similarity=0.234 Sum_probs=57.4
Q ss_pred CCeEEEEeCCc-hHhHHHHhcCCCCccEEEEEcCH---HHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeE
Q psy4592 58 PKKVLIVGGGD-GGVAREVLKHPSVESAYLVEIDN---RVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDV 133 (197)
Q Consensus 58 ~~~vLdiG~G~-G~~~~~l~~~~~~~~v~~ve~~~---~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~ 133 (197)
+++||.+|+|. |..+..+++..+ .++++++.++ +-.+.+++. .. +.+. .. |..+.+......+|+
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~G-a~Vi~~~~~~~~~~~~~~~~~~-ga-------~~v~-~~-~~~~~~~~~~~~~d~ 249 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYG-LEVWMANRREPTEVEQTVIEET-KT-------NYYN-SS-NGYDKLKDSVGKFDV 249 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHT-CEEEEEESSCCCHHHHHHHHHH-TC-------EEEE-CT-TCSHHHHHHHCCEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC-CEEEEEeCCccchHHHHHHHHh-CC-------ceec-hH-HHHHHHHHhCCCCCE
Confidence 78999999832 334444555444 5899999988 777777653 11 1111 11 222222211257999
Q ss_pred EEECCCCCCCCCcccccHHHH-HHHHhhcCCCcEEEEEc
Q psy4592 134 IITDSSDPVGPAESLFQASYF-ELMSRALRPGGIVCSQA 171 (197)
Q Consensus 134 I~~~~~~~~~~~~~l~~~~~~-~~~~~~LkpgG~l~~~~ 171 (197)
|+..... ...+ +.+.+.|+++|.+++..
T Consensus 250 vid~~g~----------~~~~~~~~~~~l~~~G~iv~~g 278 (366)
T 2cdc_A 250 IIDATGA----------DVNILGNVIPLLGRNGVLGLFG 278 (366)
T ss_dssp EEECCCC----------CTHHHHHHGGGEEEEEEEEECS
T ss_pred EEECCCC----------hHHHHHHHHHHHhcCCEEEEEe
Confidence 9876531 1245 78899999999988764
No 396
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=93.54 E-value=0.11 Score=43.18 Aligned_cols=104 Identities=16% Similarity=0.194 Sum_probs=61.8
Q ss_pred CCCCeEEEEeC--CchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEE----EcchH------HH
Q psy4592 56 PNPKKVLIVGG--GDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVH----VGDGF------RF 123 (197)
Q Consensus 56 ~~~~~vLdiG~--G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~----~~d~~------~~ 123 (197)
+.+.+||.+|+ |.|.++..+++..+ .++++++.+++-++.+++.-...--.....+..+. ..|.. +.
T Consensus 227 ~~g~~VlV~GasG~vG~~avqlak~~G-a~vi~~~~~~~~~~~~~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~ 305 (456)
T 3krt_A 227 KQGDNVLIWGASGGLGSYATQFALAGG-ANPICVVSSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKR 305 (456)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHHTCCEEEETTTTTCCSEEETTEECHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcC-CeEEEEECCHHHHHHHHhhCCcEEEecCcCcccccccccccchHHHHHHHHH
Confidence 45679999997 35666667777655 68888889999889887642100000000011000 00110 11
Q ss_pred Hhh-c-CCceeEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 124 MSE-H-QQEFDVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 124 ~~~-~-~~~~D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
+.. . ...+|+|+-... ...++.+.+.|+++|.+++..
T Consensus 306 i~~~t~g~g~Dvvid~~G-----------~~~~~~~~~~l~~~G~iv~~G 344 (456)
T 3krt_A 306 IRELTGGEDIDIVFEHPG-----------RETFGASVFVTRKGGTITTCA 344 (456)
T ss_dssp HHHHHTSCCEEEEEECSC-----------HHHHHHHHHHEEEEEEEEESC
T ss_pred HHHHhCCCCCcEEEEcCC-----------chhHHHHHHHhhCCcEEEEEe
Confidence 222 2 357999985442 346788899999999999864
No 397
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=93.52 E-value=0.21 Score=41.04 Aligned_cols=45 Identities=16% Similarity=-0.040 Sum_probs=36.1
Q ss_pred CeEEEEeCCchHhHHHHhcCCC-Ccc----EEEEEcCHHHHHHHHhhcCC
Q psy4592 59 KKVLIVGGGDGGVAREVLKHPS-VES----AYLVEIDNRVIEVSKKYLPG 103 (197)
Q Consensus 59 ~~vLdiG~G~G~~~~~l~~~~~-~~~----v~~ve~~~~~~~~a~~~~~~ 103 (197)
.+|+|+.||.|+....+.+.+. ... +.++|+++...+..+.+++.
T Consensus 11 lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~~ty~~n~~~ 60 (403)
T 4dkj_A 11 IKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAIVSYVAIHSK 60 (403)
T ss_dssp EEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHHHHHHHHHCS
T ss_pred ceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHHHHHHHHcCC
Confidence 5999999999999888776531 123 78899999999988888763
No 398
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=93.42 E-value=0.1 Score=46.41 Aligned_cols=57 Identities=18% Similarity=0.240 Sum_probs=42.5
Q ss_pred CCeEEEEeCCchHhHHHHhcCCC-----CccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHH
Q psy4592 58 PKKVLIVGGGDGGVAREVLKHPS-----VESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRF 123 (197)
Q Consensus 58 ~~~vLdiG~G~G~~~~~l~~~~~-----~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~ 123 (197)
..+|+|+-||.|+++.-+.+.+. ...+.++|+++.+++.-+.|++ ...+.+.|+.+.
T Consensus 212 ~ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nhp---------~~~~~~~di~~i 273 (784)
T 4ft4_B 212 TATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNHP---------QTEVRNEKADEF 273 (784)
T ss_dssp EEEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHCT---------TSEEEESCHHHH
T ss_pred CCeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHCC---------CCceecCcHHHh
Confidence 35899999999998877665421 2467899999999999999874 345666666543
No 399
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=93.42 E-value=0.094 Score=41.29 Aligned_cols=90 Identities=14% Similarity=0.114 Sum_probs=59.2
Q ss_pred eEEEEeC--CchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhh-cCCceeEEEE
Q psy4592 60 KVLIVGG--GDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSE-HQQEFDVIIT 136 (197)
Q Consensus 60 ~vLdiG~--G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~~~D~I~~ 136 (197)
+||.+|+ |.|.++..+++..+ .++++++.+++-.+.+++. .. ..-+-..+... ... ..+.+|+|+-
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~G-a~Vi~~~~~~~~~~~~~~l-Ga--------~~vi~~~~~~~-~~~~~~~~~d~v~d 217 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLG-YQVAAVSGRESTHGYLKSL-GA--------NRILSRDEFAE-SRPLEKQLWAGAID 217 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTT-CCEEEEESCGGGHHHHHHH-TC--------SEEEEGGGSSC-CCSSCCCCEEEEEE
T ss_pred eEEEECCCcHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHhc-CC--------CEEEecCCHHH-HHhhcCCCccEEEE
Confidence 5999997 45667777777665 5999999999999988774 11 11111111000 111 2357998875
Q ss_pred CCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 137 DSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 137 ~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
... ...++.+.+.|+++|.++...
T Consensus 218 ~~g-----------~~~~~~~~~~l~~~G~iv~~G 241 (324)
T 3nx4_A 218 TVG-----------DKVLAKVLAQMNYGGCVAACG 241 (324)
T ss_dssp SSC-----------HHHHHHHHHTEEEEEEEEECC
T ss_pred CCC-----------cHHHHHHHHHHhcCCEEEEEe
Confidence 431 337788999999999998864
No 400
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=93.41 E-value=0.044 Score=42.22 Aligned_cols=70 Identities=14% Similarity=0.141 Sum_probs=45.7
Q ss_pred hhcCCceeEEEECCCCCCCCCc-cccc------HHHHHHHHhhcCCCcEEEEEcCCCCcChhHHHHHHHHHHhhCCccc
Q psy4592 125 SEHQQEFDVIITDSSDPVGPAE-SLFQ------ASYFELMSRALRPGGIVCSQAGTLWYSLDCVGNTLQHCASVFPRLH 196 (197)
Q Consensus 125 ~~~~~~~D~I~~~~~~~~~~~~-~l~~------~~~~~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~f~~v~ 196 (197)
+...++||+|++|...+..... +... ..+-..+.+.|+|||.+++.... +-...-+.+...+.+.|..++
T Consensus 206 P~~~grYDlVfvNv~TpyR~HHYQQCeDHA~~l~mL~~~al~~L~pGGtlv~~aYG--yADR~SE~vV~alARkF~~~r 282 (324)
T 3trk_A 206 PATLGRYDLVVINIHTPFRIHHYQQCVDHAMKLQMLGGDSLRLLKPGGSLLIRAYG--YADRTSERVICVLGRKFRSSR 282 (324)
T ss_dssp CGGGCCEEEEEEECCCCCCSSHHHHHHHHHHHHHHHHHHGGGGEEEEEEEEEEECC--CCSHHHHHHHHHHHTTEEEEE
T ss_pred CCcCCceeEEEEecCCccccchHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEeec--ccccchHHHHHHHHhhheeee
Confidence 3334799999999876554221 1110 22344667999999999987643 334555677788888777665
No 401
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=93.18 E-value=0.79 Score=36.08 Aligned_cols=91 Identities=16% Similarity=0.063 Sum_probs=57.0
Q ss_pred CCeEEEEeCCch--HhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHH-HHhhcCCceeEE
Q psy4592 58 PKKVLIVGGGDG--GVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFR-FMSEHQQEFDVI 134 (197)
Q Consensus 58 ~~~vLdiG~G~G--~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~D~I 134 (197)
.++|..||+|.= .++..+.+.+...+|+++|.+++.++.+++. .. +.-...|..+ .+ ...|+|
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~-G~---------~~~~~~~~~~~~~----~~aDvV 98 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDL-GI---------IDEGTTSIAKVED----FSPDFV 98 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHT-TS---------CSEEESCTTGGGG----GCCSEE
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHC-CC---------cchhcCCHHHHhh----ccCCEE
Confidence 368999998852 3444444443223899999999888777653 10 1112234332 22 358999
Q ss_pred EECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEE
Q psy4592 135 ITDSSDPVGPAESLFQASYFELMSRALRPGGIVCS 169 (197)
Q Consensus 135 ~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~ 169 (197)
+...+.. . ..+.++++...|+++..++-
T Consensus 99 ilavp~~-----~--~~~vl~~l~~~l~~~~iv~d 126 (314)
T 3ggo_A 99 MLSSPVR-----T--FREIAKKLSYILSEDATVTD 126 (314)
T ss_dssp EECSCGG-----G--HHHHHHHHHHHSCTTCEEEE
T ss_pred EEeCCHH-----H--HHHHHHHHhhccCCCcEEEE
Confidence 9877521 1 26788889999999876654
No 402
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=93.09 E-value=0.68 Score=33.00 Aligned_cols=96 Identities=14% Similarity=0.119 Sum_probs=55.6
Q ss_pred CCeEEEEeCCchHhHHHHh---cCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHH--HHhhc--CCc
Q psy4592 58 PKKVLIVGGGDGGVAREVL---KHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFR--FMSEH--QQE 130 (197)
Q Consensus 58 ~~~vLdiG~G~G~~~~~l~---~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~--~~~ 130 (197)
..+|+.+|+|. ++..++ .......++++|.+++.++.+++. ...++.+|..+ .+... ...
T Consensus 39 ~~~v~IiG~G~--~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~-----------g~~~~~gd~~~~~~l~~~~~~~~ 105 (183)
T 3c85_A 39 HAQVLILGMGR--IGTGAYDELRARYGKISLGIEIREEAAQQHRSE-----------GRNVISGDATDPDFWERILDTGH 105 (183)
T ss_dssp TCSEEEECCSH--HHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHT-----------TCCEEECCTTCHHHHHTBCSCCC
T ss_pred CCcEEEECCCH--HHHHHHHHHHhccCCeEEEEECCHHHHHHHHHC-----------CCCEEEcCCCCHHHHHhccCCCC
Confidence 45899999874 333322 222026899999999887766542 23455566532 23322 457
Q ss_pred eeEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEcCC
Q psy4592 131 FDVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQAGT 173 (197)
Q Consensus 131 ~D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~~~ 173 (197)
+|+|+...+. .. ....+-...+.+.|++.++.....
T Consensus 106 ad~vi~~~~~-----~~--~~~~~~~~~~~~~~~~~ii~~~~~ 141 (183)
T 3c85_A 106 VKLVLLAMPH-----HQ--GNQTALEQLQRRNYKGQIAAIAEY 141 (183)
T ss_dssp CCEEEECCSS-----HH--HHHHHHHHHHHTTCCSEEEEEESS
T ss_pred CCEEEEeCCC-----hH--HHHHHHHHHHHHCCCCEEEEEECC
Confidence 8999986532 11 012223355667788888876543
No 403
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=93.08 E-value=0.66 Score=37.37 Aligned_cols=99 Identities=18% Similarity=0.326 Sum_probs=55.6
Q ss_pred CCCeEEEEeCCchHhHHH---HhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeE
Q psy4592 57 NPKKVLIVGGGDGGVARE---VLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDV 133 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~---l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~ 133 (197)
.+++|+.+|+| .++.. +++..+ .+|+++|.+++-++.+++.+.. .+.....+..+ +...-..+|+
T Consensus 165 ~~~~V~ViGaG--~iG~~~a~~l~~~G-a~V~~~d~~~~~~~~~~~~~g~--------~~~~~~~~~~~-l~~~~~~~Dv 232 (369)
T 2eez_A 165 APASVVILGGG--TVGTNAAKIALGMG-AQVTILDVNHKRLQYLDDVFGG--------RVITLTATEAN-IKKSVQHADL 232 (369)
T ss_dssp CCCEEEEECCS--HHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHTTT--------SEEEEECCHHH-HHHHHHHCSE
T ss_pred CCCEEEEECCC--HHHHHHHHHHHhCC-CEEEEEECCHHHHHHHHHhcCc--------eEEEecCCHHH-HHHHHhCCCE
Confidence 35799999985 34433 333344 5899999999887777654321 23333233222 1111235899
Q ss_pred EEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 134 IITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 134 I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
|+.....+....+.+.. +.+.+.|++||.++..+
T Consensus 233 Vi~~~g~~~~~~~~li~----~~~l~~mk~gg~iV~v~ 266 (369)
T 2eez_A 233 LIGAVLVPGAKAPKLVT----RDMLSLMKEGAVIVDVA 266 (369)
T ss_dssp EEECCC-------CCSC----HHHHTTSCTTCEEEECC
T ss_pred EEECCCCCccccchhHH----HHHHHhhcCCCEEEEEe
Confidence 99877543211222222 55667889999877654
No 404
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=93.06 E-value=0.56 Score=37.94 Aligned_cols=118 Identities=14% Similarity=0.162 Sum_probs=69.8
Q ss_pred CCCeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEEE
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVIIT 136 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~~ 136 (197)
...+||.++.+.|.++..++.. .++.+.-|--.....+.|+.. +++....+++... +......||+|+.
T Consensus 38 ~~~~~~~~~d~~gal~~~~~~~----~~~~~~ds~~~~~~~~~n~~~--~~~~~~~~~~~~~-----~~~~~~~~~~v~~ 106 (375)
T 4dcm_A 38 IRGPVLILNDAFGALSCALAEH----KPYSIGDSYISELATRENLRL--NGIDESSVKFLDS-----TADYPQQPGVVLI 106 (375)
T ss_dssp CCSCEEEECCSSSHHHHHTGGG----CCEEEESCHHHHHHHHHHHHH--TTCCGGGSEEEET-----TSCCCSSCSEEEE
T ss_pred CCCCEEEECCCCCHHHHhhccC----CceEEEhHHHHHHHHHHHHHH--cCCCccceEeccc-----ccccccCCCEEEE
Confidence 3468999999999999887643 334554333333345555543 2223334565433 2233568999998
Q ss_pred CCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEcCCCCcChhHHHHHHHHHHhhCCc
Q psy4592 137 DSSDPVGPAESLFQASYFELMSRALRPGGIVCSQAGTLWYSLDCVGNTLQHCASVFPR 194 (197)
Q Consensus 137 ~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~f~~ 194 (197)
..|.+.. . -...+..+...|++|+.+++.... ........+.+.+.++.
T Consensus 107 ~lpk~~~----~-l~~~L~~l~~~l~~~~~i~~~g~~----~~~~~~~~~~l~~~~~~ 155 (375)
T 4dcm_A 107 KVPKTLA----L-LEQQLRALRKVVTSDTRIIAGAKA----RDIHTSTLELFEKVLGP 155 (375)
T ss_dssp ECCSCHH----H-HHHHHHHHHTTCCTTSEEEEEEEG----GGCCHHHHHHHHHHTCC
T ss_pred EcCCCHH----H-HHHHHHHHHhhCCCCCEEEEEecc----cchHHHHHHHHHhhcCc
Confidence 7763221 1 155778899999999998775432 22224445555554443
No 405
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=93.06 E-value=0.23 Score=40.00 Aligned_cols=97 Identities=20% Similarity=0.210 Sum_probs=58.1
Q ss_pred CCCCeEEEEeC--CchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeE
Q psy4592 56 PNPKKVLIVGG--GDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDV 133 (197)
Q Consensus 56 ~~~~~vLdiG~--G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~ 133 (197)
..+.+||.+|+ |.|..+..+++..+ .++++++ +++-.+.+++. .. ..-+.....|..+.+.. ...+|+
T Consensus 182 ~~g~~VlV~Ga~G~vG~~~~qla~~~G-a~Vi~~~-~~~~~~~~~~l-Ga------~~v~~~~~~~~~~~~~~-~~g~D~ 251 (375)
T 2vn8_A 182 CTGKRVLILGASGGVGTFAIQVMKAWD-AHVTAVC-SQDASELVRKL-GA------DDVIDYKSGSVEEQLKS-LKPFDF 251 (375)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEE-CGGGHHHHHHT-TC------SEEEETTSSCHHHHHHT-SCCBSE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCC-CEEEEEe-ChHHHHHHHHc-CC------CEEEECCchHHHHHHhh-cCCCCE
Confidence 45689999993 45666666776655 5888888 67777777553 11 10111111233332332 246999
Q ss_pred EEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 134 IITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 134 I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
|+..... . ...++.+.+.|+++|.++...
T Consensus 252 vid~~g~-----~----~~~~~~~~~~l~~~G~iv~~g 280 (375)
T 2vn8_A 252 ILDNVGG-----S----TETWAPDFLKKWSGATYVTLV 280 (375)
T ss_dssp EEESSCT-----T----HHHHGGGGBCSSSCCEEEESC
T ss_pred EEECCCC-----h----hhhhHHHHHhhcCCcEEEEeC
Confidence 9865421 1 124466778999999998754
No 406
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=93.02 E-value=0.76 Score=36.92 Aligned_cols=100 Identities=10% Similarity=0.023 Sum_probs=60.7
Q ss_pred CCeEEEEeCCchHhHHH--HhcCCCCccEEEEEcCHHHHHHHHhhcCCCC--CCCC-CCCeEEEEcchHHHHhhcCCcee
Q psy4592 58 PKKVLIVGGGDGGVARE--VLKHPSVESAYLVEIDNRVIEVSKKYLPGMA--VGLS-DPRLTVHVGDGFRFMSEHQQEFD 132 (197)
Q Consensus 58 ~~~vLdiG~G~G~~~~~--l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~--~~~~-~~~~~~~~~d~~~~~~~~~~~~D 132 (197)
..+|..||+|.-+.+.. +++.+ ..|+.++.+++.++..++.-.... .+.. .+++.+ ..|..+.+ ...|
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G--~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~-t~d~~ea~----~~aD 101 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKG--QKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKA-YCDLKASL----EGVT 101 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTT--CCEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEE-ESCHHHHH----TTCC
T ss_pred CCeEEEECccHHHHHHHHHHHHCC--CeEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEE-ECCHHHHH----hcCC
Confidence 46899999986554433 33332 589999999988877665421100 0001 123443 35654443 3479
Q ss_pred EEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 133 VIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 133 ~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
+|+...+.. ...+.++++...++|+..++...
T Consensus 102 vVilaVp~~-------~~~~vl~~i~~~l~~~~ivvs~~ 133 (356)
T 3k96_A 102 DILIVVPSF-------AFHEVITRMKPLIDAKTRIAWGT 133 (356)
T ss_dssp EEEECCCHH-------HHHHHHHHHGGGCCTTCEEEECC
T ss_pred EEEECCCHH-------HHHHHHHHHHHhcCCCCEEEEEe
Confidence 999877421 12678888888998887665443
No 407
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=93.00 E-value=0.99 Score=37.47 Aligned_cols=107 Identities=16% Similarity=0.237 Sum_probs=62.7
Q ss_pred CCeEEEEeCCchHhHHH--HhcCCCCccEEEEEcCHHHHHHHHhhcCCCC-CCCC--------CCCeEEEEcchHHHHhh
Q psy4592 58 PKKVLIVGGGDGGVARE--VLKHPSVESAYLVEIDNRVIEVSKKYLPGMA-VGLS--------DPRLTVHVGDGFRFMSE 126 (197)
Q Consensus 58 ~~~vLdiG~G~G~~~~~--l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~-~~~~--------~~~~~~~~~d~~~~~~~ 126 (197)
.-++-.||+|.-+...+ +++.+ .+|+++|++++.++..++...... .++. ..++++ ..|..+.+
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G--~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~-ttd~~ea~-- 82 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFG--HEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSF-TTDLAEGV-- 82 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEE-ESCHHHHH--
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEE-ECCHHHHH--
Confidence 45888999986554433 33442 689999999998887765321100 0000 113333 35554433
Q ss_pred cCCceeEEEECCCCCCCC---Cccc-ccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 127 HQQEFDVIITDSSDPVGP---AESL-FQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 127 ~~~~~D~I~~~~~~~~~~---~~~l-~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
...|+|+...+.+... .+.+ +-.+.++.+.+.|++|..++..+
T Consensus 83 --~~aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~iVV~~S 129 (446)
T 4a7p_A 83 --KDADAVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTKPSVIVTKS 129 (446)
T ss_dssp --TTCSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCCEEEECS
T ss_pred --hcCCEEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCCCCEEEEeC
Confidence 3479999987654321 1111 11556678888999888777654
No 408
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=92.88 E-value=0.067 Score=42.26 Aligned_cols=92 Identities=14% Similarity=0.130 Sum_probs=55.9
Q ss_pred eEEEEeC--CchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhh-cCCceeEEEE
Q psy4592 60 KVLIVGG--GDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSE-HQQEFDVIIT 136 (197)
Q Consensus 60 ~vLdiG~--G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~~~D~I~~ 136 (197)
+||.+|+ |.|..+..+++..+ .++++++.+++-.+.+++. .. ..-+.....+ .+.+.. ....+|+|+.
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~G-a~vi~~~~~~~~~~~~~~l-Ga------~~~i~~~~~~-~~~~~~~~~~~~d~vid 222 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRG-YTVEASTGKAAEHDYLRVL-GA------KEVLAREDVM-AERIRPLDKQRWAAAVD 222 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTT-CCEEEEESCTTCHHHHHHT-TC------SEEEECC----------CCSCCEEEEEE
T ss_pred eEEEecCCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHc-CC------cEEEecCCcH-HHHHHHhcCCcccEEEE
Confidence 8999997 45666667776655 6899999998888888763 21 1011111111 111111 2347999986
Q ss_pred CCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 137 DSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 137 ~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
.... ..++.+.+.|+++|.+++..
T Consensus 223 ~~g~-----------~~~~~~~~~l~~~G~~v~~G 246 (328)
T 1xa0_A 223 PVGG-----------RTLATVLSRMRYGGAVAVSG 246 (328)
T ss_dssp CSTT-----------TTHHHHHHTEEEEEEEEECS
T ss_pred CCcH-----------HHHHHHHHhhccCCEEEEEe
Confidence 5421 13577888999999998764
No 409
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=92.56 E-value=0.95 Score=30.24 Aligned_cols=96 Identities=14% Similarity=0.209 Sum_probs=53.1
Q ss_pred CCeEEEEeCCchHhH--HHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHH--HHhh-cCCcee
Q psy4592 58 PKKVLIVGGGDGGVA--REVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFR--FMSE-HQQEFD 132 (197)
Q Consensus 58 ~~~vLdiG~G~G~~~--~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~-~~~~~D 132 (197)
.++|+.+|+|.-+.. ..+.+. + .+++++|.+++.++.+++.. .+.++.+|..+ .+.. ....+|
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~-g-~~v~~~d~~~~~~~~~~~~~----------~~~~~~~d~~~~~~l~~~~~~~~d 71 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEK-G-HDIVLIDIDKDICKKASAEI----------DALVINGDCTKIKTLEDAGIEDAD 71 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHC----------SSEEEESCTTSHHHHHHTTTTTCS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-C-CeEEEEECCHHHHHHHHHhc----------CcEEEEcCCCCHHHHHHcCcccCC
Confidence 358999988643222 223333 3 68999999998776655432 23455565432 2222 235789
Q ss_pred EEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEcCC
Q psy4592 133 VIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQAGT 173 (197)
Q Consensus 133 ~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~~~ 173 (197)
+|+...+.. . ....+..+.+.++++ .+++....
T Consensus 72 ~vi~~~~~~-----~--~~~~~~~~~~~~~~~-~ii~~~~~ 104 (140)
T 1lss_A 72 MYIAVTGKE-----E--VNLMSSLLAKSYGIN-KTIARISE 104 (140)
T ss_dssp EEEECCSCH-----H--HHHHHHHHHHHTTCC-CEEEECSS
T ss_pred EEEEeeCCc-----h--HHHHHHHHHHHcCCC-EEEEEecC
Confidence 999876421 1 123444556667775 45554433
No 410
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=92.54 E-value=0.61 Score=38.30 Aligned_cols=97 Identities=21% Similarity=0.288 Sum_probs=62.0
Q ss_pred CCeEEEEeCCchH-hHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHH--Hhh-cCCceeE
Q psy4592 58 PKKVLIVGGGDGG-VAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRF--MSE-HQQEFDV 133 (197)
Q Consensus 58 ~~~vLdiG~G~G~-~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~-~~~~~D~ 133 (197)
..+|+.+|+|.-+ .....+...+ ..+++||.|++.++.+++. .+.++.+|+.+. +.. ....+|+
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g-~~vvvId~d~~~v~~~~~~-----------g~~vi~GDat~~~~L~~agi~~A~~ 71 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSG-VKMVVLDHDPDHIETLRKF-----------GMKVFYGDATRMDLLESAGAAKAEV 71 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTT-CCEEEEECCHHHHHHHHHT-----------TCCCEESCTTCHHHHHHTTTTTCSE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCC-CCEEEEECCHHHHHHHHhC-----------CCeEEEcCCCCHHHHHhcCCCccCE
Confidence 3589999997532 2222222223 7999999999999888752 245677887643 333 2467999
Q ss_pred EEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEcCC
Q psy4592 134 IITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQAGT 173 (197)
Q Consensus 134 I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~~~ 173 (197)
|++.... .. ....+-...+.+.|+..++.....
T Consensus 72 viv~~~~-----~~--~n~~i~~~ar~~~p~~~Iiara~~ 104 (413)
T 3l9w_A 72 LINAIDD-----PQ--TNLQLTEMVKEHFPHLQIIARARD 104 (413)
T ss_dssp EEECCSS-----HH--HHHHHHHHHHHHCTTCEEEEEESS
T ss_pred EEECCCC-----hH--HHHHHHHHHHHhCCCCeEEEEECC
Confidence 9987642 11 123445566778899888876543
No 411
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=92.54 E-value=1.5 Score=32.92 Aligned_cols=75 Identities=13% Similarity=0.169 Sum_probs=49.0
Q ss_pred CCCeEEEEeCCchHhHHHHh----cCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHH--------
Q psy4592 57 NPKKVLIVGGGDGGVAREVL----KHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFM-------- 124 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~----~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~-------- 124 (197)
.++.+|..|++.| ++.+++ +.+ .+|+.++.+++.++.+.+.+.. ...++.++.+|+.+.-
T Consensus 6 ~~k~vlVTGas~G-IG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~Dv~~~~~v~~~~~~ 77 (252)
T 3h7a_A 6 RNATVAVIGAGDY-IGAEIAKKFAAEG--FTVFAGRRNGEKLAPLVAEIEA-----AGGRIVARSLDARNEDEVTAFLNA 77 (252)
T ss_dssp CSCEEEEECCSSH-HHHHHHHHHHHTT--CEEEEEESSGGGGHHHHHHHHH-----TTCEEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCCch-HHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHHHHh-----cCCeEEEEECcCCCHHHHHHHHHH
Confidence 4568888888765 444444 342 6899999988776655554432 2347888888875421
Q ss_pred -hhcCCceeEEEECCCC
Q psy4592 125 -SEHQQEFDVIITDSSD 140 (197)
Q Consensus 125 -~~~~~~~D~I~~~~~~ 140 (197)
... ++.|++|.+.-.
T Consensus 78 ~~~~-g~id~lv~nAg~ 93 (252)
T 3h7a_A 78 ADAH-APLEVTIFNVGA 93 (252)
T ss_dssp HHHH-SCEEEEEECCCC
T ss_pred HHhh-CCceEEEECCCc
Confidence 112 579999998753
No 412
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=91.91 E-value=2.2 Score=32.14 Aligned_cols=77 Identities=16% Similarity=0.189 Sum_probs=49.0
Q ss_pred CCCeEEEEeCCchHhHHHHhcC--CCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHH------h---
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKH--PSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFM------S--- 125 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~--~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~------~--- 125 (197)
.++.+|..|++.| ++.++++. ....+|+.++.+++-++.+.+.+.. ...++.++.+|+.+.- .
T Consensus 5 ~~k~vlVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~Dv~~~~~v~~~~~~~~ 78 (257)
T 3imf_A 5 KEKVVIITGGSSG-MGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQ-----FPGQILTVQMDVRNTDDIQKMIEQID 78 (257)
T ss_dssp TTCEEEETTTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC-----STTCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----cCCcEEEEEccCCCHHHHHHHHHHHH
Confidence 3467887777554 55444432 1126899999998887776665543 2347888888876421 1
Q ss_pred hcCCceeEEEECCC
Q psy4592 126 EHQQEFDVIITDSS 139 (197)
Q Consensus 126 ~~~~~~D~I~~~~~ 139 (197)
...++.|++|.+.-
T Consensus 79 ~~~g~id~lv~nAg 92 (257)
T 3imf_A 79 EKFGRIDILINNAA 92 (257)
T ss_dssp HHHSCCCEEEECCC
T ss_pred HHcCCCCEEEECCC
Confidence 11247899998875
No 413
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=91.84 E-value=1.2 Score=30.66 Aligned_cols=98 Identities=10% Similarity=0.122 Sum_probs=58.4
Q ss_pred CeEEEEeCCchHhHHHHhcCC--CCccEEEEEcC-HHHHHHHHhhcCCCCCCCCCCCeEEEEcchHH--HHhh-cCCcee
Q psy4592 59 KKVLIVGGGDGGVAREVLKHP--SVESAYLVEID-NRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFR--FMSE-HQQEFD 132 (197)
Q Consensus 59 ~~vLdiG~G~G~~~~~l~~~~--~~~~v~~ve~~-~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~-~~~~~D 132 (197)
.+|+.+|+| .++..+.+.. ....++++|.+ ++..+..+...+ ..+.++.+|+.+ .+.. .-+.+|
T Consensus 4 ~~vlI~G~G--~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~--------~~~~~i~gd~~~~~~l~~a~i~~ad 73 (153)
T 1id1_A 4 DHFIVCGHS--ILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLG--------DNADVIPGDSNDSSVLKKAGIDRCR 73 (153)
T ss_dssp SCEEEECCS--HHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHC--------TTCEEEESCTTSHHHHHHHTTTTCS
T ss_pred CcEEEECCC--HHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhc--------CCCeEEEcCCCCHHHHHHcChhhCC
Confidence 589999875 4444433211 12689999997 455544443322 247788888753 2332 246789
Q ss_pred EEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEcCC
Q psy4592 133 VIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQAGT 173 (197)
Q Consensus 133 ~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~~~ 173 (197)
+|++.... .. .........+.+.|...++.....
T Consensus 74 ~vi~~~~~-----d~--~n~~~~~~a~~~~~~~~ii~~~~~ 107 (153)
T 1id1_A 74 AILALSDN-----DA--DNAFVVLSAKDMSSDVKTVLAVSD 107 (153)
T ss_dssp EEEECSSC-----HH--HHHHHHHHHHHHTSSSCEEEECSS
T ss_pred EEEEecCC-----hH--HHHHHHHHHHHHCCCCEEEEEECC
Confidence 99987632 11 123445566777788888876544
No 414
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=91.71 E-value=3.3 Score=31.14 Aligned_cols=109 Identities=9% Similarity=0.067 Sum_probs=61.8
Q ss_pred CCCeEEEEeCCc--h--H-hHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHH------Hh
Q psy4592 57 NPKKVLIVGGGD--G--G-VAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRF------MS 125 (197)
Q Consensus 57 ~~~~vLdiG~G~--G--~-~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~------~~ 125 (197)
.+++||..|++. | . ++..+++.+ .+++.++.++...+.+++..... ...++.++.+|+.+. +.
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~v~~~~~ 79 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAG--ARLIFTYAGERLEKSVHELAGTL----DRNDSIILPCDVTNDAEIETCFA 79 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTT--CEEEEEESSGGGHHHHHHHHHTS----SSCCCEEEECCCSSSHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCC--CEEEEecCchHHHHHHHHHHHhc----CCCCceEEeCCCCCHHHHHHHHH
Confidence 457899999762 2 1 333444443 68889888876555554443321 223688888886532 11
Q ss_pred ---hcCCceeEEEECCCCCC-----CCCcccccH--------------HHHHHHHhhcCCCcEEEEEc
Q psy4592 126 ---EHQQEFDVIITDSSDPV-----GPAESLFQA--------------SYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 126 ---~~~~~~D~I~~~~~~~~-----~~~~~l~~~--------------~~~~~~~~~LkpgG~l~~~~ 171 (197)
...++.|+++.+..... .+......+ .+.+.+...++++|.++..+
T Consensus 80 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 147 (266)
T 3oig_A 80 SIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLT 147 (266)
T ss_dssp HHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEE
T ss_pred HHHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEe
Confidence 11247899998875322 111111111 24456677888888877665
No 415
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=91.62 E-value=0.61 Score=36.55 Aligned_cols=94 Identities=16% Similarity=0.094 Sum_probs=57.2
Q ss_pred CCCCCeEEEEe-C-CchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCcee
Q psy4592 55 HPNPKKVLIVG-G-GDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFD 132 (197)
Q Consensus 55 ~~~~~~vLdiG-~-G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D 132 (197)
..++.+||.+| + |.|.++..+++..+ .+++++. +++-.+.+++. .. . .++..+-.+.+......+|
T Consensus 150 ~~~g~~vlV~Ga~G~vG~~a~q~a~~~G-a~vi~~~-~~~~~~~~~~l-Ga--------~-~~i~~~~~~~~~~~~~g~D 217 (321)
T 3tqh_A 150 VKQGDVVLIHAGAGGVGHLAIQLAKQKG-TTVITTA-SKRNHAFLKAL-GA--------E-QCINYHEEDFLLAISTPVD 217 (321)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEE-CHHHHHHHHHH-TC--------S-EEEETTTSCHHHHCCSCEE
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHcC-CEEEEEe-ccchHHHHHHc-CC--------C-EEEeCCCcchhhhhccCCC
Confidence 35668999997 3 35667777777655 5888887 45447777664 21 1 1221111111222235799
Q ss_pred EEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 133 VIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 133 ~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
+|+-... ...++.+.+.|+++|.++...
T Consensus 218 ~v~d~~g-----------~~~~~~~~~~l~~~G~iv~~g 245 (321)
T 3tqh_A 218 AVIDLVG-----------GDVGIQSIDCLKETGCIVSVP 245 (321)
T ss_dssp EEEESSC-----------HHHHHHHGGGEEEEEEEEECC
T ss_pred EEEECCC-----------cHHHHHHHHhccCCCEEEEeC
Confidence 9985442 223488899999999998753
No 416
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=91.52 E-value=0.76 Score=31.86 Aligned_cols=101 Identities=16% Similarity=0.167 Sum_probs=55.1
Q ss_pred CCCCeEEEEeCCchHh-HHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHH--HHhhc-CCce
Q psy4592 56 PNPKKVLIVGGGDGGV-AREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFR--FMSEH-QQEF 131 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~-~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~-~~~~ 131 (197)
..+.+|+.+|+|.=+. ....+...+ ..++++|.+++.++.++. . ....++.+|..+ .+... ...+
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~~g-~~V~vid~~~~~~~~~~~---~-------~g~~~~~~d~~~~~~l~~~~~~~a 85 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASSSG-HSVVVVDKNEYAFHRLNS---E-------FSGFTVVGDAAEFETLKECGMEKA 85 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTT-CEEEEEESCGGGGGGSCT---T-------CCSEEEESCTTSHHHHHTTTGGGC
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhCC-CeEEEEECCHHHHHHHHh---c-------CCCcEEEecCCCHHHHHHcCcccC
Confidence 3457999999875322 222222223 589999999876543321 1 123455566432 22221 3468
Q ss_pred eEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEcCCC
Q psy4592 132 DVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQAGTL 174 (197)
Q Consensus 132 D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~~~~ 174 (197)
|+|+..... .. ....+..+.+.+.+...++.....+
T Consensus 86 d~Vi~~~~~-----~~--~~~~~~~~~~~~~~~~~iv~~~~~~ 121 (155)
T 2g1u_A 86 DMVFAFTND-----DS--TNFFISMNARYMFNVENVIARVYDP 121 (155)
T ss_dssp SEEEECSSC-----HH--HHHHHHHHHHHTSCCSEEEEECSSG
T ss_pred CEEEEEeCC-----cH--HHHHHHHHHHHHCCCCeEEEEECCH
Confidence 999987642 11 1223344555566777777765443
No 417
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=91.46 E-value=4.4 Score=33.27 Aligned_cols=103 Identities=17% Similarity=0.156 Sum_probs=57.1
Q ss_pred eEEEEeCCchHhH--HHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCC-CCCC--------CCCeEEEEcchHHHHhhcC
Q psy4592 60 KVLIVGGGDGGVA--REVLKHPSVESAYLVEIDNRVIEVSKKYLPGMA-VGLS--------DPRLTVHVGDGFRFMSEHQ 128 (197)
Q Consensus 60 ~vLdiG~G~G~~~--~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~-~~~~--------~~~~~~~~~d~~~~~~~~~ 128 (197)
+|..||+|.=+.. ..+++.+ .+|+++|.+++.++..++...... .++. ..++.+ ..|..+.+.
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G--~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~-t~~~~~~~~--- 75 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARG--HEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSG-TTDFKKAVL--- 75 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTT--CEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEE-ESCHHHHHH---
T ss_pred EEEEECCCHHHHHHHHHHHHCC--CEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEE-eCCHHHHhc---
Confidence 6888998854333 3344443 589999999998887665321110 0000 112332 345444333
Q ss_pred CceeEEEECCCCCCCCC--ccc-ccHHHHHHHHhhcCC---CcEEEE
Q psy4592 129 QEFDVIITDSSDPVGPA--ESL-FQASYFELMSRALRP---GGIVCS 169 (197)
Q Consensus 129 ~~~D~I~~~~~~~~~~~--~~l-~~~~~~~~~~~~Lkp---gG~l~~ 169 (197)
..|+|+...+.+...+ ..+ +..+.++++.+.|++ +..++.
T Consensus 76 -~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~~~~iVV~ 121 (436)
T 1mv8_A 76 -DSDVSFICVGTPSKKNGDLDLGYIETVCREIGFAIREKSERHTVVV 121 (436)
T ss_dssp -TCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHTTCCSCCEEEE
T ss_pred -cCCEEEEEcCCCcccCCCcchHHHHHHHHHHHHHhcccCCCcEEEE
Confidence 3799999876544211 111 125567778888888 555554
No 418
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=91.44 E-value=2.9 Score=31.92 Aligned_cols=78 Identities=12% Similarity=0.164 Sum_probs=48.0
Q ss_pred CCCeEEEEeCCchHhHHHHhcC--CCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHH------h---
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKH--PSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFM------S--- 125 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~--~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~------~--- 125 (197)
.++.+|..|++.| ++.++++. ..+.+|+.++.+++-++...+.+.. ...++.++.+|+.+.- .
T Consensus 23 ~~k~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~-----~~~~~~~~~~Dv~d~~~v~~~~~~~~ 96 (279)
T 3sju_A 23 RPQTAFVTGVSSG-IGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRA-----AGHDVDGSSCDVTSTDEVHAAVAAAV 96 (279)
T ss_dssp --CEEEEESTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHT-----TTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----cCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 3468888887654 44444432 1126899999998877665554433 2357888888876421 1
Q ss_pred hcCCceeEEEECCCC
Q psy4592 126 EHQQEFDVIITDSSD 140 (197)
Q Consensus 126 ~~~~~~D~I~~~~~~ 140 (197)
..-++.|++|.+.-.
T Consensus 97 ~~~g~id~lv~nAg~ 111 (279)
T 3sju_A 97 ERFGPIGILVNSAGR 111 (279)
T ss_dssp HHHCSCCEEEECCCC
T ss_pred HHcCCCcEEEECCCC
Confidence 112478999988753
No 419
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=91.37 E-value=3.7 Score=31.13 Aligned_cols=106 Identities=16% Similarity=0.129 Sum_probs=60.6
Q ss_pred CCCeEEEEeCCchHhHHHHh----cCCCCccEEEEEcC------------HHHHHHHHhhcCCCCCCCCCCCeEEEEcch
Q psy4592 57 NPKKVLIVGGGDGGVAREVL----KHPSVESAYLVEID------------NRVIEVSKKYLPGMAVGLSDPRLTVHVGDG 120 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~----~~~~~~~v~~ve~~------------~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~ 120 (197)
.++.||..|++.| ++.+++ +.+ .+++.++.+ .+-++.+...+.. ...++.++.+|+
T Consensus 9 ~gk~vlVTGas~g-IG~~ia~~l~~~G--~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~D~ 80 (287)
T 3pxx_A 9 QDKVVLVTGGARG-QGRSHAVKLAEEG--ADIILFDICHDIETNEYPLATSRDLEEAGLEVEK-----TGRKAYTAEVDV 80 (287)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTT--CEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHH-----TTSCEEEEECCT
T ss_pred CCCEEEEeCCCCh-HHHHHHHHHHHCC--CeEEEEcccccccccccchhhhHHHHHHHHHHHh-----cCCceEEEEccC
Confidence 4568888888654 444443 343 689999876 5444444433322 234788888887
Q ss_pred HHHHh------h---cCCceeEEEECCCCCCCCCcccccH--------------HHHHHHHhhcCCCcEEEEEc
Q psy4592 121 FRFMS------E---HQQEFDVIITDSSDPVGPAESLFQA--------------SYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 121 ~~~~~------~---~~~~~D~I~~~~~~~~~~~~~l~~~--------------~~~~~~~~~LkpgG~l~~~~ 171 (197)
.+.-. . .-++.|++|.+.-..... .....+ .+.+.+...|+.+|.++..+
T Consensus 81 ~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~-~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 153 (287)
T 3pxx_A 81 RDRAAVSRELANAVAEFGKLDVVVANAGICPLG-AHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTG 153 (287)
T ss_dssp TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCC-TTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEEC
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCCcCccc-CcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEec
Confidence 64211 1 124789999986532211 011001 23455667778888877654
No 420
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=91.22 E-value=1.5 Score=32.23 Aligned_cols=95 Identities=19% Similarity=0.211 Sum_probs=57.6
Q ss_pred eEEEEeCCchHhHHHHhcC--CCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHH--Hhh-cCCceeEE
Q psy4592 60 KVLIVGGGDGGVAREVLKH--PSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRF--MSE-HQQEFDVI 134 (197)
Q Consensus 60 ~vLdiG~G~G~~~~~l~~~--~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~-~~~~~D~I 134 (197)
+|+.+|+| .++..+++. .....++++|.+++.++...+.. ...++.+|+.+. +.. ....+|+|
T Consensus 2 ~iiIiG~G--~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~----------~~~~i~gd~~~~~~l~~a~i~~ad~v 69 (218)
T 3l4b_C 2 KVIIIGGE--TTAYYLARSMLSRKYGVVIINKDRELCEEFAKKL----------KATIIHGDGSHKEILRDAEVSKNDVV 69 (218)
T ss_dssp CEEEECCH--HHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHS----------SSEEEESCTTSHHHHHHHTCCTTCEE
T ss_pred EEEEECCC--HHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHc----------CCeEEEcCCCCHHHHHhcCcccCCEE
Confidence 68888875 444444331 12368999999999877654432 356778887642 222 24678999
Q ss_pred EECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEcCC
Q psy4592 135 ITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQAGT 173 (197)
Q Consensus 135 ~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~~~ 173 (197)
++.... .. ....+....+.+.+...++.....
T Consensus 70 i~~~~~-----d~--~n~~~~~~a~~~~~~~~iia~~~~ 101 (218)
T 3l4b_C 70 VILTPR-----DE--VNLFIAQLVMKDFGVKRVVSLVND 101 (218)
T ss_dssp EECCSC-----HH--HHHHHHHHHHHTSCCCEEEECCCS
T ss_pred EEecCC-----cH--HHHHHHHHHHHHcCCCeEEEEEeC
Confidence 976632 11 123445556667777777765443
No 421
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=91.19 E-value=2.6 Score=31.75 Aligned_cols=78 Identities=21% Similarity=0.292 Sum_probs=49.5
Q ss_pred CCCeEEEEeC-Cch--H-hHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHh-------
Q psy4592 57 NPKKVLIVGG-GDG--G-VAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMS------- 125 (197)
Q Consensus 57 ~~~~vLdiG~-G~G--~-~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~------- 125 (197)
.++.||..|+ |.| . ++..+++.+ .+++.++.+++-.+...+.+... ...++.++.+|+.+.-.
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~G--~~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~~Dl~~~~~v~~~~~~ 94 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLEG--ADVVISDYHERRLGETRDQLADL----GLGRVEAVVCDVTSTEAVDALITQ 94 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHTT----CSSCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHCC--CEEEEecCCHHHHHHHHHHHHhc----CCCceEEEEeCCCCHHHHHHHHHH
Confidence 4568999887 444 2 333444443 68999999987776665554321 23578899988764211
Q ss_pred --hcCCceeEEEECCCC
Q psy4592 126 --EHQQEFDVIITDSSD 140 (197)
Q Consensus 126 --~~~~~~D~I~~~~~~ 140 (197)
...++.|++|.+.-.
T Consensus 95 ~~~~~g~id~li~~Ag~ 111 (266)
T 3o38_A 95 TVEKAGRLDVLVNNAGL 111 (266)
T ss_dssp HHHHHSCCCEEEECCCC
T ss_pred HHHHhCCCcEEEECCCc
Confidence 112478999998753
No 422
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=91.10 E-value=4.2 Score=31.27 Aligned_cols=107 Identities=9% Similarity=0.051 Sum_probs=60.9
Q ss_pred CCCeEEEEeCCch-HhH----HHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHH------h
Q psy4592 57 NPKKVLIVGGGDG-GVA----REVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFM------S 125 (197)
Q Consensus 57 ~~~~vLdiG~G~G-~~~----~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~------~ 125 (197)
.++.+|..|++.| +++ ..+++.+ .+|+.++.++...+.+++.... ..++.++.+|+.+.- .
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~~G--~~V~~~~r~~~~~~~~~~~~~~------~~~~~~~~~Dv~d~~~v~~~~~ 101 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAREAG--AELAFTYQGDALKKRVEPLAEE------LGAFVAGHCDVADAASIDAVFE 101 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHHTT--CEEEEEECSHHHHHHHHHHHHH------HTCEEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCC--CEEEEEcCCHHHHHHHHHHHHh------cCCceEEECCCCCHHHHHHHHH
Confidence 4578999997633 233 3444443 6888999887655544443221 125778888865421 1
Q ss_pred ---hcCCceeEEEECCCCCC-----CCCccccc--------------HHHHHHHHhhcCCCcEEEEEc
Q psy4592 126 ---EHQQEFDVIITDSSDPV-----GPAESLFQ--------------ASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 126 ---~~~~~~D~I~~~~~~~~-----~~~~~l~~--------------~~~~~~~~~~LkpgG~l~~~~ 171 (197)
..-++.|++|.+.-... .+...... -.+.+.+...|+++|.++..+
T Consensus 102 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~is 169 (293)
T 3grk_A 102 TLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLT 169 (293)
T ss_dssp HHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred HHHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEe
Confidence 11357999998875321 11111100 124456667788888877654
No 423
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=90.92 E-value=4 Score=30.88 Aligned_cols=109 Identities=15% Similarity=0.116 Sum_probs=59.5
Q ss_pred CCCeEEEEeCCchHhHHHHhcC--CCCccEEEEEcC-HHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHh------h-
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKH--PSVESAYLVEID-NRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMS------E- 126 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~--~~~~~v~~ve~~-~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~------~- 126 (197)
.++.+|..|++.| ++.++++. ....+++.++.+ ++..+...+.+.. ...++.++.+|+.+.-. .
T Consensus 17 ~~k~~lVTGas~g-IG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~Dv~~~~~v~~~~~~~ 90 (270)
T 3is3_A 17 DGKVALVTGSGRG-IGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKA-----LGSDAIAIKADIRQVPEIVKLFDQA 90 (270)
T ss_dssp TTCEEEESCTTSH-HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-----TTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEECCCch-HHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh-----cCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 4568888887654 55444432 112677777753 4444444333322 13468888888764311 1
Q ss_pred --cCCceeEEEECCCCCCCCC-ccccc--------------HHHHHHHHhhcCCCcEEEEEc
Q psy4592 127 --HQQEFDVIITDSSDPVGPA-ESLFQ--------------ASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 127 --~~~~~D~I~~~~~~~~~~~-~~l~~--------------~~~~~~~~~~LkpgG~l~~~~ 171 (197)
.-++.|++|.+.-...... ..... -.+.+.+.+.|+++|.++..+
T Consensus 91 ~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~is 152 (270)
T 3is3_A 91 VAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTS 152 (270)
T ss_dssp HHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEEC
T ss_pred HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEe
Confidence 1247899998764322111 11100 123556677888899887765
No 424
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=90.87 E-value=4 Score=31.34 Aligned_cols=109 Identities=17% Similarity=0.218 Sum_probs=60.8
Q ss_pred CCCeEEEEeCCchHhHHHHhcCC--CCccEEEEEcCHH-HHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHh--------
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKHP--SVESAYLVEIDNR-VIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMS-------- 125 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~~--~~~~v~~ve~~~~-~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~-------- 125 (197)
.+++||..|++.| ++.++++.. ...+++.++.+++ ..+...+.... ...++.++.+|+.+.-.
T Consensus 46 ~gk~vlVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~~Dv~d~~~v~~~~~~~ 119 (291)
T 3ijr_A 46 KGKNVLITGGDSG-IGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEK-----EGVKCVLLPGDLSDEQHCKDIVQET 119 (291)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHT-----TTCCEEEEESCTTSHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHh-----cCCcEEEEECCCCCHHHHHHHHHHH
Confidence 4568888887654 554444321 1268888888754 33333333322 23578888888764211
Q ss_pred -hcCCceeEEEECCCCCCC--CCcccc--------------cHHHHHHHHhhcCCCcEEEEEc
Q psy4592 126 -EHQQEFDVIITDSSDPVG--PAESLF--------------QASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 126 -~~~~~~D~I~~~~~~~~~--~~~~l~--------------~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
...++.|++|.+...... +..... .-.+.+.+.+.|+++|.++..+
T Consensus 120 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~is 182 (291)
T 3ijr_A 120 VRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTA 182 (291)
T ss_dssp HHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEEC
T ss_pred HHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEe
Confidence 112478999988643211 111000 0124556677888889877654
No 425
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=90.87 E-value=3.3 Score=30.73 Aligned_cols=76 Identities=13% Similarity=0.120 Sum_probs=48.1
Q ss_pred CCCeEEEEeCCchHhHHHHh----cCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHH------h-
Q psy4592 57 NPKKVLIVGGGDGGVAREVL----KHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFM------S- 125 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~----~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~------~- 125 (197)
.++.+|..|++. +++.+++ +.+ .+++.++.+++..+...+.+.. ...++.++.+|+.+.- .
T Consensus 4 ~~k~vlITGas~-gIG~~~a~~l~~~G--~~v~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~ 75 (247)
T 3lyl_A 4 NEKVALVTGASR-GIGFEVAHALASKG--ATVVGTATSQASAEKFENSMKE-----KGFKARGLVLNISDIESIQNFFAE 75 (247)
T ss_dssp TTCEEEESSCSS-HHHHHHHHHHHHTT--CEEEEEESSHHHHHHHHHHHHH-----TTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCCC-hHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHHHHh-----cCCceEEEEecCCCHHHHHHHHHH
Confidence 346788888655 4544444 342 6899999998776655554432 2346888888875421 1
Q ss_pred --hcCCceeEEEECCCC
Q psy4592 126 --EHQQEFDVIITDSSD 140 (197)
Q Consensus 126 --~~~~~~D~I~~~~~~ 140 (197)
...++.|+++.+...
T Consensus 76 ~~~~~~~id~li~~Ag~ 92 (247)
T 3lyl_A 76 IKAENLAIDILVNNAGI 92 (247)
T ss_dssp HHHTTCCCSEEEECCCC
T ss_pred HHHHcCCCCEEEECCCC
Confidence 123478999998753
No 426
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=90.85 E-value=2.7 Score=32.54 Aligned_cols=76 Identities=17% Similarity=0.235 Sum_probs=49.7
Q ss_pred CCCeEEEEeCCchHhHHHHh----cCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHh------h
Q psy4592 57 NPKKVLIVGGGDGGVAREVL----KHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMS------E 126 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~----~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~------~ 126 (197)
.++.||..|++.| ++.+++ +.+ .+++.++.+++-++.+.+.+.. ...++.++.+|+.+.-. .
T Consensus 30 ~gk~vlVTGas~g-IG~~la~~l~~~G--~~V~~~~r~~~~~~~~~~~l~~-----~~~~~~~~~~Dv~d~~~v~~~~~~ 101 (301)
T 3tjr_A 30 DGRAAVVTGGASG-IGLATATEFARRG--ARLVLSDVDQPALEQAVNGLRG-----QGFDAHGVVCDVRHLDEMVRLADE 101 (301)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHH-----TTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEeCCCCH-HHHHHHHHHHHCC--CEEEEEECCHHHHHHHHHHHHh-----cCCceEEEEccCCCHHHHHHHHHH
Confidence 4568998888755 444444 343 6899999998877766555432 23478888888764311 1
Q ss_pred ---cCCceeEEEECCCC
Q psy4592 127 ---HQQEFDVIITDSSD 140 (197)
Q Consensus 127 ---~~~~~D~I~~~~~~ 140 (197)
..+..|++|.+.-.
T Consensus 102 ~~~~~g~id~lvnnAg~ 118 (301)
T 3tjr_A 102 AFRLLGGVDVVFSNAGI 118 (301)
T ss_dssp HHHHHSSCSEEEECCCC
T ss_pred HHHhCCCCCEEEECCCc
Confidence 12478999998753
No 427
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=90.84 E-value=1.8 Score=34.38 Aligned_cols=112 Identities=13% Similarity=0.089 Sum_probs=59.0
Q ss_pred CCCCeEEEEeCCchHhHHHHh-cCCCCccEEEEEcCHHHHHHHHhhcCCCCCCC-CCCCeEEEEcchHHHHhhcCCceeE
Q psy4592 56 PNPKKVLIVGGGDGGVAREVL-KHPSVESAYLVEIDNRVIEVSKKYLPGMAVGL-SDPRLTVHVGDGFRFMSEHQQEFDV 133 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~~~~~l~-~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~D~ 133 (197)
..+.+|..+|+|.-+.+.+.. ...+...++.+|++++.++.....+......+ ...+++. ..|..+.+ ...|+
T Consensus 7 ~~~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-t~d~~ea~----~~aDi 81 (331)
T 1pzg_A 7 QRRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA-EYSYEAAL----TGADC 81 (331)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE-ECSHHHHH----TTCSE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEE-eCCHHHHh----CCCCE
Confidence 345689999997655543322 12222369999999876665222111000000 1224433 26755433 34799
Q ss_pred EEECCCCCCCC--------Ccccc------cHHHHHHHHhhcCCCcEEEEEcCC
Q psy4592 134 IITDSSDPVGP--------AESLF------QASYFELMSRALRPGGIVCSQAGT 173 (197)
Q Consensus 134 I~~~~~~~~~~--------~~~l~------~~~~~~~~~~~LkpgG~l~~~~~~ 173 (197)
|+.....+..+ ...+. -.+.++.+.+.. |++.+++.++.
T Consensus 82 Vi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~vi~~tNP 134 (331)
T 1pzg_A 82 VIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYC-PKTFIIVVTNP 134 (331)
T ss_dssp EEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHC-TTCEEEECCSS
T ss_pred EEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCcEEEEEcCc
Confidence 99876322211 11111 145666777764 99998876544
No 428
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=90.72 E-value=3.2 Score=31.59 Aligned_cols=77 Identities=19% Similarity=0.243 Sum_probs=50.0
Q ss_pred CCCeEEEEeCCchHhHHHHhcC--CCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHh---------
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKH--PSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMS--------- 125 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~--~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~--------- 125 (197)
+++.+|.-|++.| ++.++++. ....+|..++.+++-++...+.+.. ...++.++.+|+.+.-.
T Consensus 6 ~gKvalVTGas~G-IG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~-----~g~~~~~~~~Dvt~~~~v~~~~~~~~ 79 (254)
T 4fn4_A 6 KNKVVIVTGAGSG-IGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRG-----MGKEVLGVKADVSKKKDVEEFVRRTF 79 (254)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-----TTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCH-HHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHh-----cCCcEEEEEccCCCHHHHHHHHHHHH
Confidence 4568888887765 44444432 1227899999999887766665543 23578888888764211
Q ss_pred hcCCceeEEEECCC
Q psy4592 126 EHQQEFDVIITDSS 139 (197)
Q Consensus 126 ~~~~~~D~I~~~~~ 139 (197)
..-++.|++|.|.-
T Consensus 80 ~~~G~iDiLVNNAG 93 (254)
T 4fn4_A 80 ETYSRIDVLCNNAG 93 (254)
T ss_dssp HHHSCCCEEEECCC
T ss_pred HHcCCCCEEEECCc
Confidence 11357899998864
No 429
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=90.67 E-value=3.9 Score=34.14 Aligned_cols=108 Identities=19% Similarity=0.180 Sum_probs=61.4
Q ss_pred CeEEEEeCCchHhH--HHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCC-CCCC-------CCCeEEEEcchHHHHhhcC
Q psy4592 59 KKVLIVGGGDGGVA--REVLKHPSVESAYLVEIDNRVIEVSKKYLPGMA-VGLS-------DPRLTVHVGDGFRFMSEHQ 128 (197)
Q Consensus 59 ~~vLdiG~G~G~~~--~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~-~~~~-------~~~~~~~~~d~~~~~~~~~ 128 (197)
.+|..||+|.=+.. ..+++.+...+|+++|.+++.++..++...... .++. ..++. ...|..+.+.
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~-~t~~~~~~~~--- 85 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLF-FSSDIPKAIA--- 85 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEE-EESCHHHHHH---
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEE-EECCHHHHhh---
Confidence 58999999865443 334444323689999999998887764311100 0000 01232 2345434333
Q ss_pred CceeEEEECCCCCCCC-------Cccc-ccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 129 QEFDVIITDSSDPVGP-------AESL-FQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 129 ~~~D~I~~~~~~~~~~-------~~~l-~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
..|+|+...+.+... ...+ +..+.++.+.+.|++|..++..+
T Consensus 86 -~aDvvii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~S 135 (481)
T 2o3j_A 86 -EADLIFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAGGPKIVVEKS 135 (481)
T ss_dssp -HCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHHCCSCEEEEECS
T ss_pred -cCCEEEEecCCccccccccccCCCcHHHHHHHHHHHHHhCCCCCEEEECC
Confidence 379999987654321 1111 12566778888999877766543
No 430
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=90.53 E-value=0.27 Score=33.92 Aligned_cols=74 Identities=8% Similarity=0.182 Sum_probs=43.9
Q ss_pred CHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHH--HhhcCCceeEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEE
Q psy4592 90 DNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRF--MSEHQQEFDVIITDSSDPVGPAESLFQASYFELMSRALRPGGIV 167 (197)
Q Consensus 90 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l 167 (197)
+|+.++.++..+.+- .....+.+.-|-... +.-+..+||.|+.-.+... ...++....+..+.+.|||||.|
T Consensus 21 ~pe~le~~k~~~~~~----~~~~~d~qmlDRLa~G~VsLp~stYD~V~~lt~~~~--~~~~l~r~li~~l~~aLkpgG~L 94 (136)
T 2km1_A 21 TPELVENTKAQAASK----KVKFVDQFLINKLNDGSITLENAKYETVHYLTPEAQ--TDIKFPKKLISVLADSLKPNGSL 94 (136)
T ss_dssp SHHHHHHHHHHHHHT----TEEEEEEEEHHHHHHTCCCCCSSSCCSEEEECCCSS--CSCCCCHHHHHHHHTTCCTTCCE
T ss_pred CHHHHHHHHHhhhcc----ccchhhHHHHHHHhcCcccCCcccccEEEEecCCcc--chhhcCHHHHHHHHHHhCCCCEE
Confidence 577777777654320 012244444441110 0113568998887443221 22445589999999999999999
Q ss_pred EE
Q psy4592 168 CS 169 (197)
Q Consensus 168 ~~ 169 (197)
.-
T Consensus 95 ~g 96 (136)
T 2km1_A 95 IG 96 (136)
T ss_dssp EC
T ss_pred Ee
Confidence 84
No 431
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=90.46 E-value=0.95 Score=30.64 Aligned_cols=93 Identities=8% Similarity=0.105 Sum_probs=54.4
Q ss_pred CeEEEEeCCchHhHHHHhc---CCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHH--Hhh-cCCcee
Q psy4592 59 KKVLIVGGGDGGVAREVLK---HPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRF--MSE-HQQEFD 132 (197)
Q Consensus 59 ~~vLdiG~G~G~~~~~l~~---~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~-~~~~~D 132 (197)
++|+.+|+|. ++..+++ ..+ .+++++|.+++.++.+++. ...++.+|+.+. +.. ....+|
T Consensus 7 ~~v~I~G~G~--iG~~la~~L~~~g-~~V~~id~~~~~~~~~~~~-----------~~~~~~gd~~~~~~l~~~~~~~~d 72 (141)
T 3llv_A 7 YEYIVIGSEA--AGVGLVRELTAAG-KKVLAVDKSKEKIELLEDE-----------GFDAVIADPTDESFYRSLDLEGVS 72 (141)
T ss_dssp CSEEEECCSH--HHHHHHHHHHHTT-CCEEEEESCHHHHHHHHHT-----------TCEEEECCTTCHHHHHHSCCTTCS
T ss_pred CEEEEECCCH--HHHHHHHHHHHCC-CeEEEEECCHHHHHHHHHC-----------CCcEEECCCCCHHHHHhCCcccCC
Confidence 5899999965 3333332 223 6899999999888776542 245677776542 222 235789
Q ss_pred EEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEcCC
Q psy4592 133 VIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQAGT 173 (197)
Q Consensus 133 ~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~~~ 173 (197)
+|+...+ +.. .........+.+. ...++.....
T Consensus 73 ~vi~~~~-----~~~--~n~~~~~~a~~~~-~~~iia~~~~ 105 (141)
T 3llv_A 73 AVLITGS-----DDE--FNLKILKALRSVS-DVYAIVRVSS 105 (141)
T ss_dssp EEEECCS-----CHH--HHHHHHHHHHHHC-CCCEEEEESC
T ss_pred EEEEecC-----CHH--HHHHHHHHHHHhC-CceEEEEEcC
Confidence 9997664 111 0122333444556 6666665443
No 432
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=90.40 E-value=1.7 Score=35.98 Aligned_cols=106 Identities=12% Similarity=0.200 Sum_probs=60.2
Q ss_pred CeEEEEeCCchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCC-CC------CCCCeEEEEcchHHHHhhcCCce
Q psy4592 59 KKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAV-GL------SDPRLTVHVGDGFRFMSEHQQEF 131 (197)
Q Consensus 59 ~~vLdiG~G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~-~~------~~~~~~~~~~d~~~~~~~~~~~~ 131 (197)
.+|..||+|.-+.+.+.....+ .+|+++|++++.++..++....... ++ ...++++ ..|..+.+ ...
T Consensus 37 mkIaVIGlG~mG~~lA~~La~G-~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~-ttd~~ea~----~~a 110 (432)
T 3pid_A 37 MKITISGTGYVGLSNGVLIAQN-HEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAEKPLNFRA-TTDKHDAY----RNA 110 (432)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-SEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEE-ESCHHHHH----TTC
T ss_pred CEEEEECcCHHHHHHHHHHHcC-CeEEEEecCHHHhhHHhccCCccccccHHHHHhhccCCeEE-EcCHHHHH----hCC
Confidence 5899999986554433221123 7999999999998877663211000 00 0113332 34544433 347
Q ss_pred eEEEECCCCCCCCC---ccc-ccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 132 DVIITDSSDPVGPA---ESL-FQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 132 D~I~~~~~~~~~~~---~~l-~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
|+|+...|.+.... +.+ .-.+.++.+.+ |+||..++..+
T Consensus 111 DvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV~~S 153 (432)
T 3pid_A 111 DYVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMIIKS 153 (432)
T ss_dssp SEEEECCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEEECS
T ss_pred CEEEEeCCCccccccccccHHHHHHHHHHHHh-cCCCcEEEEeC
Confidence 99998876543211 111 11456677778 89988777644
No 433
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=90.29 E-value=0.37 Score=39.28 Aligned_cols=48 Identities=23% Similarity=0.372 Sum_probs=35.3
Q ss_pred CCCCCeEEEEeCCchHhHHHHhcC-------CCCccEEEEEcCHHHHHHHHhhcC
Q psy4592 55 HPNPKKVLIVGGGDGGVAREVLKH-------PSVESAYLVEIDNRVIEVSKKYLP 102 (197)
Q Consensus 55 ~~~~~~vLdiG~G~G~~~~~l~~~-------~~~~~v~~ve~~~~~~~~a~~~~~ 102 (197)
.+.+-.|+|+|.|.|.++.-+++. ....+++.||+||...+.=++.+.
T Consensus 78 ~p~~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~ 132 (387)
T 1zkd_A 78 EPQTLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLA 132 (387)
T ss_dssp CCSSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHST
T ss_pred CCCCcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhc
Confidence 344568999999999998776642 123589999999988775555553
No 434
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=90.18 E-value=1.7 Score=33.19 Aligned_cols=78 Identities=15% Similarity=0.115 Sum_probs=48.5
Q ss_pred CCCeEEEEeCCchHhHHHHhcC--CCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHH------Hh---
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKH--PSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRF------MS--- 125 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~--~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~------~~--- 125 (197)
+++.+|.-|++.| ++.++++. ....+|..++.+++.++.+.+.+.. ...++..+.+|+.+. +.
T Consensus 8 ~gKvalVTGas~G-IG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~-----~g~~~~~~~~Dv~~~~~v~~~~~~~~ 81 (255)
T 4g81_D 8 TGKTALVTGSARG-LGFAYAEGLAAAGARVILNDIRATLLAESVDTLTR-----KGYDAHGVAFDVTDELAIEAAFSKLD 81 (255)
T ss_dssp TTCEEEETTCSSH-HHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHH-----TTCCEEECCCCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-----cCCcEEEEEeeCCCHHHHHHHHHHHH
Confidence 5667777777665 55444432 1227899999998877655554433 234677777776532 11
Q ss_pred hcCCceeEEEECCCC
Q psy4592 126 EHQQEFDVIITDSSD 140 (197)
Q Consensus 126 ~~~~~~D~I~~~~~~ 140 (197)
..-++.|++|.|.-.
T Consensus 82 ~~~G~iDiLVNNAG~ 96 (255)
T 4g81_D 82 AEGIHVDILINNAGI 96 (255)
T ss_dssp HTTCCCCEEEECCCC
T ss_pred HHCCCCcEEEECCCC
Confidence 124689999998743
No 435
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=90.17 E-value=1.7 Score=34.12 Aligned_cols=114 Identities=10% Similarity=0.099 Sum_probs=58.4
Q ss_pred CCeEEEEeCCchH--hHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEE
Q psy4592 58 PKKVLIVGGGDGG--VAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVII 135 (197)
Q Consensus 58 ~~~vLdiG~G~G~--~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~ 135 (197)
..+|..||+|..+ ++..++......+++.+|++++....+...... ..++++.. .|. +.+ ...|+|+
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~~~g~a~dl~~~-----~~~~i~~t-~d~-~~l----~~aD~Vi 82 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEIF-----NLPNVEIS-KDL-SAS----AHSKVVI 82 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-----CHHHHHHH-----TCTTEEEE-SCG-GGG----TTCSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcchHHHHHHHhhh-----cCCCeEEe-CCH-HHH----CCCCEEE
Confidence 3689999999633 444444433335899999998633233222111 22356553 564 222 3479999
Q ss_pred ECCCCCCCCCcc--cc------cHHHHHHHHhhcCCCcEEEEEcCCCCcChhHHHHHHHH
Q psy4592 136 TDSSDPVGPAES--LF------QASYFELMSRALRPGGIVCSQAGTLWYSLDCVGNTLQH 187 (197)
Q Consensus 136 ~~~~~~~~~~~~--l~------~~~~~~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~ 187 (197)
...-.+.....+ +. ..+.++.+.+.. |++.+++.++. .+.+..++..
T Consensus 83 ~aag~~~pG~tR~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~sNP----~~~~t~~~~~ 137 (303)
T 2i6t_A 83 FTVNSLGSSQSYLDVVQSNVDMFRALVPALGHYS-QHSVLLVASQP----VEIMTYVTWK 137 (303)
T ss_dssp ECCCC----CCHHHHHHHHHHHHHHHHHHHHHHT-TTCEEEECSSS----HHHHHHHHHH
T ss_pred EcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEcCCh----HHHHHHHHHH
Confidence 875332100000 00 134556666664 99998876553 3444444444
No 436
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=90.14 E-value=2.6 Score=34.33 Aligned_cols=103 Identities=10% Similarity=0.083 Sum_probs=56.3
Q ss_pred eEEEEeCCchHhHH--HHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCC-CC------CCCCeEEEEcchHHHHhhcCCc
Q psy4592 60 KVLIVGGGDGGVAR--EVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAV-GL------SDPRLTVHVGDGFRFMSEHQQE 130 (197)
Q Consensus 60 ~vLdiG~G~G~~~~--~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~-~~------~~~~~~~~~~d~~~~~~~~~~~ 130 (197)
+|..||+|.=+... .+++ + .+|+++|.+++.++..++....+.. ++ ...++.+ ..|..+.+. .
T Consensus 2 kI~VIG~G~vG~~~A~~La~--G-~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~l~~-t~~~~~~~~----~ 73 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL--Q-NEVTIVDILPSKVDKINNGLSPIQDEYIEYYLKSKQLSIKA-TLDSKAAYK----E 73 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT--T-SEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEE-ESCHHHHHH----H
T ss_pred EEEEECCCHHHHHHHHHHhC--C-CEEEEEECCHHHHHHHHcCCCCcCCCCHHHHHHhccCcEEE-eCCHHHHhc----C
Confidence 68889987533332 2333 3 6899999999888766553211000 00 0012222 344433333 3
Q ss_pred eeEEEECCCCCCC---CCccc-ccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 131 FDVIITDSSDPVG---PAESL-FQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 131 ~D~I~~~~~~~~~---~~~~l-~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
.|+|+...+.+.. ....+ ...+.++.+.+ ++++..++..+
T Consensus 74 aDvviiavpt~~~~~~~~~dl~~v~~v~~~i~~-l~~~~iVV~~S 117 (402)
T 1dlj_A 74 AELVIIATPTNYNSRINYFDTQHVETVIKEVLS-VNSHATLIIKS 117 (402)
T ss_dssp CSEEEECCCCCEETTTTEECCHHHHHHHHHHHH-HCSSCEEEECS
T ss_pred CCEEEEecCCCcccCCCCccHHHHHHHHHHHHh-hCCCCEEEEeC
Confidence 7999998765421 11111 12667778888 88887777633
No 437
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=90.07 E-value=2.9 Score=31.26 Aligned_cols=109 Identities=15% Similarity=0.151 Sum_probs=60.5
Q ss_pred CCCeEEEEeCCchHhHHHHhcCC---CCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHh--h-----
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKHP---SVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMS--E----- 126 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~~---~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~--~----- 126 (197)
++++||..|+ +|+++.++++.. ...+++.++.+++-.+...+.+.. ...++.++.+|+.+.-. .
T Consensus 3 ~~k~vlITGa-sggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~-----~~~~~~~~~~Dl~~~~~~~~~~~~~ 76 (276)
T 1wma_A 3 GIHVALVTGG-NKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQA-----EGLSPRFHQLDIDDLQSIRALRDFL 76 (276)
T ss_dssp CCCEEEESSC-SSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHH-----TTCCCEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHh-----cCCeeEEEECCCCCHHHHHHHHHHH
Confidence 3457877775 556666555421 236899999987765554444322 12467888888764211 1
Q ss_pred --cCCceeEEEECCCCCCCCCcccc---------------cHHHHHHHHhhcCCCcEEEEEc
Q psy4592 127 --HQQEFDVIITDSSDPVGPAESLF---------------QASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 127 --~~~~~D~I~~~~~~~~~~~~~l~---------------~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
..++.|+||.+............ ...+++.+.+.++++|.+++.+
T Consensus 77 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~s 138 (276)
T 1wma_A 77 RKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVS 138 (276)
T ss_dssp HHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred HHhcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEEC
Confidence 12379999988643221110000 0124455566677778777654
No 438
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=89.98 E-value=2.6 Score=32.16 Aligned_cols=76 Identities=13% Similarity=0.186 Sum_probs=47.9
Q ss_pred CCCeEEEEeCCchHhHHHHh----cCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHH------hh
Q psy4592 57 NPKKVLIVGGGDGGVAREVL----KHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFM------SE 126 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~----~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~------~~ 126 (197)
.++.+|..|++.| ++.+++ +.+ .+|+.++.+++.++...+.+.. ...++.++.+|+.+.- ..
T Consensus 31 ~gk~~lVTGas~G-IG~aia~~la~~G--~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~Dl~d~~~v~~~~~~ 102 (276)
T 3r1i_A 31 SGKRALITGASTG-IGKKVALAYAEAG--AQVAVAARHSDALQVVADEIAG-----VGGKALPIRCDVTQPDQVRGMLDQ 102 (276)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHHTT--CEEEEEESSGGGGHHHHHHHHH-----TTCCCEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEeCCCCH-HHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHHHHh-----cCCeEEEEEcCCCCHHHHHHHHHH
Confidence 4568888887654 444443 343 6899999988766655554432 2346778888876421 11
Q ss_pred ---cCCceeEEEECCCC
Q psy4592 127 ---HQQEFDVIITDSSD 140 (197)
Q Consensus 127 ---~~~~~D~I~~~~~~ 140 (197)
.-++.|++|.+.-.
T Consensus 103 ~~~~~g~iD~lvnnAg~ 119 (276)
T 3r1i_A 103 MTGELGGIDIAVCNAGI 119 (276)
T ss_dssp HHHHHSCCSEEEECCCC
T ss_pred HHHHcCCCCEEEECCCC
Confidence 12478999998753
No 439
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=89.97 E-value=4.5 Score=31.72 Aligned_cols=108 Identities=13% Similarity=0.185 Sum_probs=56.3
Q ss_pred CCCeEEEEeCCchHhHH--HHhcCCCCccEEEEEcCHHHHHH-HHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeE
Q psy4592 57 NPKKVLIVGGGDGGVAR--EVLKHPSVESAYLVEIDNRVIEV-SKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDV 133 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~--~l~~~~~~~~v~~ve~~~~~~~~-a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~ 133 (197)
.+.+|..+|+|.=+.+. .+.......+++.+|++++..+. +....... .....++++...+... -...|+
T Consensus 5 ~~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~--~~~~~~~~i~~~~~~a-----l~~aDv 77 (316)
T 1ldn_A 5 GGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGK--VFAPKPVDIWHGDYDD-----CRDADL 77 (316)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHT--TSSSSCCEEEECCGGG-----TTTCSE
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHh--hhcCCCeEEEcCcHHH-----hCCCCE
Confidence 34689999997533332 23222223589999999875442 22211100 0012245555544221 245899
Q ss_pred EEECCCCCCCCC---cccc------cHHHHHHHHhhcCCCcEEEEEcC
Q psy4592 134 IITDSSDPVGPA---ESLF------QASYFELMSRALRPGGIVCSQAG 172 (197)
Q Consensus 134 I~~~~~~~~~~~---~~l~------~~~~~~~~~~~LkpgG~l~~~~~ 172 (197)
|+...+.+..+. ..+. ..+..+.+.+. .|++.+++.++
T Consensus 78 Viia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~~iv~tN 124 (316)
T 1ldn_A 78 VVICAGANQKPGETRLDLVDKNIAIFRSIVESVMAS-GFQGLFLVATN 124 (316)
T ss_dssp EEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHH-TCCSEEEECSS
T ss_pred EEEcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHH-CCCCEEEEeCC
Confidence 999865444321 1111 12344555555 59998887544
No 440
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=89.90 E-value=1.8 Score=34.05 Aligned_cols=105 Identities=17% Similarity=0.276 Sum_probs=56.5
Q ss_pred CCCeEEEEeCCchHhHHHH--hcCCCCccEEEEEcCHHHHHH-HHh---hcCCCCCCCCCCCeEEEEcchHHHHhhcCCc
Q psy4592 57 NPKKVLIVGGGDGGVAREV--LKHPSVESAYLVEIDNRVIEV-SKK---YLPGMAVGLSDPRLTVHVGDGFRFMSEHQQE 130 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l--~~~~~~~~v~~ve~~~~~~~~-a~~---~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 130 (197)
.+.+|..+|+|.-+.+... +...-..++..+|++++.++- +.. ..+. ...++++...+. +.+ ..
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~-----~~~~~~v~~~~~-~a~----~~ 74 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPY-----SPTTVRVKAGEY-SDC----HD 74 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGG-----SSSCCEEEECCG-GGG----TT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhh-----cCCCeEEEeCCH-HHh----CC
Confidence 3468999999765544332 222222589999999865442 111 1221 113455555442 222 34
Q ss_pred eeEEEECCCCCCCCCcc---c--cc----HHHHHHHHhhcCCCcEEEEEcC
Q psy4592 131 FDVIITDSSDPVGPAES---L--FQ----ASYFELMSRALRPGGIVCSQAG 172 (197)
Q Consensus 131 ~D~I~~~~~~~~~~~~~---l--~~----~~~~~~~~~~LkpgG~l~~~~~ 172 (197)
.|+|+.....+..+... + .+ .+..+.+.+. .|++.+++.++
T Consensus 75 aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~viv~tN 124 (317)
T 3d0o_A 75 ADLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMAS-KFDGIFLVATN 124 (317)
T ss_dssp CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHT-TCCSEEEECSS
T ss_pred CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHh-CCCcEEEEecC
Confidence 79999877554432210 0 01 2233444444 89999998553
No 441
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=89.90 E-value=3.9 Score=29.64 Aligned_cols=67 Identities=24% Similarity=0.243 Sum_probs=43.5
Q ss_pred eEEEEeCCchHhHHHHhcC--CCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHH-H--HhhcCCceeEE
Q psy4592 60 KVLIVGGGDGGVAREVLKH--PSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFR-F--MSEHQQEFDVI 134 (197)
Q Consensus 60 ~vLdiG~G~G~~~~~l~~~--~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~-~--~~~~~~~~D~I 134 (197)
+||..|+ +|.++.++.+. ..+.+|++++-+++- ... .++++++.+|+.+ . +...-+.+|+|
T Consensus 2 ~ilItGa-tG~iG~~l~~~L~~~g~~V~~~~R~~~~-------~~~------~~~~~~~~~D~~d~~~~~~~~~~~~d~v 67 (219)
T 3dqp_A 2 KIFIVGS-TGRVGKSLLKSLSTTDYQIYAGARKVEQ-------VPQ------YNNVKAVHFDVDWTPEEMAKQLHGMDAI 67 (219)
T ss_dssp EEEEEST-TSHHHHHHHHHHTTSSCEEEEEESSGGG-------SCC------CTTEEEEECCTTSCHHHHHTTTTTCSEE
T ss_pred eEEEECC-CCHHHHHHHHHHHHCCCEEEEEECCccc-------hhh------cCCceEEEecccCCHHHHHHHHcCCCEE
Confidence 6888885 56666665542 123689999987642 111 1578999999866 2 33334579999
Q ss_pred EECCCC
Q psy4592 135 ITDSSD 140 (197)
Q Consensus 135 ~~~~~~ 140 (197)
+.+...
T Consensus 68 i~~ag~ 73 (219)
T 3dqp_A 68 INVSGS 73 (219)
T ss_dssp EECCCC
T ss_pred EECCcC
Confidence 987754
No 442
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=89.78 E-value=0.79 Score=36.26 Aligned_cols=101 Identities=16% Similarity=0.129 Sum_probs=60.5
Q ss_pred CeEEEEeCCchH--hHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCC----C-CCCC-CC--------CCeEEEEcchHH
Q psy4592 59 KKVLIVGGGDGG--VAREVLKHPSVESAYLVEIDNRVIEVSKKYLPG----M-AVGL-SD--------PRLTVHVGDGFR 122 (197)
Q Consensus 59 ~~vLdiG~G~G~--~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~----~-~~~~-~~--------~~~~~~~~d~~~ 122 (197)
++|-.||+|+=+ ++..+++.+ .+|++.|.+++.++.+++.+.. . ..++ .. .++++ ..|..+
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G--~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~-~~~~~e 83 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGG--FRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISS-CTNLAE 83 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--CCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEE-ECCHHH
T ss_pred ceEEEEeeCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEE-eCCHHH
Confidence 589999998633 444444443 6899999999988877543110 0 0000 00 12343 245433
Q ss_pred HHhhcCCceeEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 123 FMSEHQQEFDVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 123 ~~~~~~~~~D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
.+ ...|+|+...+. +.. ....+++++...++|+..++.++
T Consensus 84 av----~~aDlVieavpe----~~~-~k~~v~~~l~~~~~~~~Ii~s~t 123 (319)
T 2dpo_A 84 AV----EGVVHIQECVPE----NLD-LKRKIFAQLDSIVDDRVVLSSSS 123 (319)
T ss_dssp HT----TTEEEEEECCCS----CHH-HHHHHHHHHHTTCCSSSEEEECC
T ss_pred HH----hcCCEEEEeccC----CHH-HHHHHHHHHHhhCCCCeEEEEeC
Confidence 22 458999988752 111 12568888999999988776544
No 443
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=89.74 E-value=0.44 Score=37.86 Aligned_cols=94 Identities=9% Similarity=-0.022 Sum_probs=55.4
Q ss_pred CeEEEEe-CC-chHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhc--CCceeEE
Q psy4592 59 KKVLIVG-GG-DGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEH--QQEFDVI 134 (197)
Q Consensus 59 ~~vLdiG-~G-~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~--~~~~D~I 134 (197)
+.||..| +| .|..+..+++..+ .++++++.+++-.+.+++.-. ..-+.....|..+.+... ...+|+|
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~G-a~Vi~~~~~~~~~~~~~~~Ga-------~~~~~~~~~~~~~~v~~~~~~~g~D~v 237 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEEG-FRPIVTVRRDEQIALLKDIGA-------AHVLNEKAPDFEATLREVMKAEQPRIF 237 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHHT-CEEEEEESCGGGHHHHHHHTC-------SEEEETTSTTHHHHHHHHHHHHCCCEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHcCC-------CEEEECCcHHHHHHHHHHhcCCCCcEE
Confidence 4555543 22 3444455555555 599999999988888876421 101111112333333321 2369999
Q ss_pred EECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 135 ITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 135 ~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
+-... ...++.+.+.|+++|.+++..
T Consensus 238 id~~g-----------~~~~~~~~~~l~~~G~iv~~G 263 (349)
T 3pi7_A 238 LDAVT-----------GPLASAIFNAMPKRARWIIYG 263 (349)
T ss_dssp EESSC-----------HHHHHHHHHHSCTTCEEEECC
T ss_pred EECCC-----------ChhHHHHHhhhcCCCEEEEEe
Confidence 86542 234477889999999999864
No 444
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=89.72 E-value=1.3 Score=36.89 Aligned_cols=69 Identities=20% Similarity=0.309 Sum_probs=46.8
Q ss_pred CCCeEEEEeCCchHhHHHHhcC--CCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHH--Hhh-cCCce
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKH--PSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRF--MSE-HQQEF 131 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~--~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~-~~~~~ 131 (197)
+.++|+.+|||. ++..+++. ..+..++.||.+++.++.+...+ .+..+.||+.+. +.. ..+.+
T Consensus 2 ~~M~iiI~G~G~--vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~----------~~~~i~Gd~~~~~~L~~Agi~~a 69 (461)
T 4g65_A 2 NAMKIIILGAGQ--VGGTLAENLVGENNDITIVDKDGDRLRELQDKY----------DLRVVNGHASHPDVLHEAGAQDA 69 (461)
T ss_dssp CCEEEEEECCSH--HHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS----------SCEEEESCTTCHHHHHHHTTTTC
T ss_pred CcCEEEEECCCH--HHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc----------CcEEEEEcCCCHHHHHhcCCCcC
Confidence 456899999985 33333332 12368999999999998777654 356788988643 332 35678
Q ss_pred eEEEEC
Q psy4592 132 DVIITD 137 (197)
Q Consensus 132 D~I~~~ 137 (197)
|++++-
T Consensus 70 d~~ia~ 75 (461)
T 4g65_A 70 DMLVAV 75 (461)
T ss_dssp SEEEEC
T ss_pred CEEEEE
Confidence 988874
No 445
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=89.68 E-value=1.4 Score=34.00 Aligned_cols=101 Identities=18% Similarity=0.286 Sum_probs=58.9
Q ss_pred CeEEEEeCCchH--hHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCC------C-CCCC-------CCeEEEEcchHH
Q psy4592 59 KKVLIVGGGDGG--VAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMA------V-GLSD-------PRLTVHVGDGFR 122 (197)
Q Consensus 59 ~~vLdiG~G~G~--~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~------~-~~~~-------~~~~~~~~d~~~ 122 (197)
++|..||+|+=+ ++..++.. + .+|+.+|.+++.++.+++.+.... . .... .+++. ..|..+
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~-G-~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~-~~~~~~ 81 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFH-G-FAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRY-SDDLAQ 81 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-T-CEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEE-ESCHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-C-CeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEE-eCCHHH
Confidence 589999998633 23333334 3 689999999998887765421000 0 0000 01222 344333
Q ss_pred HHhhcCCceeEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 123 FMSEHQQEFDVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 123 ~~~~~~~~~D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
.+ ...|+|+...+.. . -....+++++...++|+..++.++
T Consensus 82 ~~----~~aDlVi~av~~~----~-~~~~~v~~~l~~~~~~~~il~s~t 121 (283)
T 4e12_A 82 AV----KDADLVIEAVPES----L-DLKRDIYTKLGELAPAKTIFATNS 121 (283)
T ss_dssp HT----TTCSEEEECCCSC----H-HHHHHHHHHHHHHSCTTCEEEECC
T ss_pred Hh----ccCCEEEEeccCc----H-HHHHHHHHHHHhhCCCCcEEEECC
Confidence 22 4589999877521 1 112667888999999988776554
No 446
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=89.59 E-value=2.8 Score=32.40 Aligned_cols=79 Identities=15% Similarity=0.144 Sum_probs=48.6
Q ss_pred CCCeEEEEeCCchHhHHHHhcC--CCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHh---------
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKH--PSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMS--------- 125 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~--~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~--------- 125 (197)
.++.||..|++.| ++.++++. ..+.+|+.++.+++-++...+.+... ...++.++.+|+.+.-.
T Consensus 40 ~~k~vlVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~~Dv~d~~~v~~~~~~~~ 114 (293)
T 3rih_A 40 SARSVLVTGGTKG-IGRGIATVFARAGANVAVAARSPRELSSVTAELGEL----GAGNVIGVRLDVSDPGSCADAARTVV 114 (293)
T ss_dssp TTCEEEETTTTSH-HHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTS----SSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhh----CCCcEEEEEEeCCCHHHHHHHHHHHH
Confidence 4567877777554 55444432 11268999999987766655555431 22478888888764311
Q ss_pred hcCCceeEEEECCCC
Q psy4592 126 EHQQEFDVIITDSSD 140 (197)
Q Consensus 126 ~~~~~~D~I~~~~~~ 140 (197)
..-++.|++|.+.-.
T Consensus 115 ~~~g~iD~lvnnAg~ 129 (293)
T 3rih_A 115 DAFGALDVVCANAGI 129 (293)
T ss_dssp HHHSCCCEEEECCCC
T ss_pred HHcCCCCEEEECCCC
Confidence 112478999988643
No 447
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=89.36 E-value=4.5 Score=29.22 Aligned_cols=100 Identities=13% Similarity=0.208 Sum_probs=56.1
Q ss_pred eEEEEeCCchHhHHHHhcCC--CCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEEEC
Q psy4592 60 KVLIVGGGDGGVAREVLKHP--SVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVIITD 137 (197)
Q Consensus 60 ~vLdiG~G~G~~~~~l~~~~--~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~~~ 137 (197)
+||..|+ +|.++..+.+.. ...+|+++.-++.-.+.. . .++++++.+|+.+.-...-+.+|+||.+
T Consensus 2 kilVtGa-tG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~--------~~~~~~~~~D~~d~~~~~~~~~d~vi~~ 69 (224)
T 3h2s_A 2 KIAVLGA-TGRAGSAIVAEARRRGHEVLAVVRDPQKAADR---L--------GATVATLVKEPLVLTEADLDSVDAVVDA 69 (224)
T ss_dssp EEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---T--------CTTSEEEECCGGGCCHHHHTTCSEEEEC
T ss_pred EEEEEcC-CCHHHHHHHHHHHHCCCEEEEEEecccccccc---c--------CCCceEEecccccccHhhcccCCEEEEC
Confidence 6888886 455555544321 126899999887654422 1 2468889999764311112468999988
Q ss_pred CCCCCCCCcccccHHHHHHHHhhcCCC-cEEEEEc
Q psy4592 138 SSDPVGPAESLFQASYFELMSRALRPG-GIVCSQA 171 (197)
Q Consensus 138 ~~~~~~~~~~l~~~~~~~~~~~~Lkpg-G~l~~~~ 171 (197)
....+.+............+.+.++.. +.+++.+
T Consensus 70 ag~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~S 104 (224)
T 3h2s_A 70 LSVPWGSGRGYLHLDFATHLVSLLRNSDTLAVFIL 104 (224)
T ss_dssp CCCCTTSSCTHHHHHHHHHHHHTCTTCCCEEEEEC
T ss_pred CccCCCcchhhHHHHHHHHHHHHHHHcCCcEEEEe
Confidence 754332221111233445555555543 5666553
No 448
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=89.34 E-value=1.9 Score=32.30 Aligned_cols=78 Identities=21% Similarity=0.177 Sum_probs=44.6
Q ss_pred HHHHhhcccCCCCCCeEEEEeCCchHhHHH--HhcCCCCccEEEEEcC--HHHHHHHHhhcCCCCCCCCCCCeEEEEcch
Q psy4592 45 EMIAFLPLCSHPNPKKVLIVGGGDGGVARE--VLKHPSVESAYLVEID--NRVIEVSKKYLPGMAVGLSDPRLTVHVGDG 120 (197)
Q Consensus 45 ~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~--l~~~~~~~~v~~ve~~--~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~ 120 (197)
+.+.++|++..-.+++||.+|+|.=+.... +++.+ +.++.++.+ +++.+++.+ .+++++..+.
T Consensus 18 ~~~~~~Pifl~L~gk~VLVVGgG~va~~ka~~Ll~~G--A~VtVvap~~~~~l~~l~~~-----------~~i~~i~~~~ 84 (223)
T 3dfz_A 18 EGRHMYTVMLDLKGRSVLVVGGGTIATRRIKGFLQEG--AAITVVAPTVSAEINEWEAK-----------GQLRVKRKKV 84 (223)
T ss_dssp ----CCEEEECCTTCCEEEECCSHHHHHHHHHHGGGC--CCEEEECSSCCHHHHHHHHT-----------TSCEEECSCC
T ss_pred cccCccccEEEcCCCEEEEECCCHHHHHHHHHHHHCC--CEEEEECCCCCHHHHHHHHc-----------CCcEEEECCC
Confidence 456667777777888999999986554433 33332 688888643 444444432 2455555443
Q ss_pred HHHHhhcCCceeEEEECC
Q psy4592 121 FRFMSEHQQEFDVIITDS 138 (197)
Q Consensus 121 ~~~~~~~~~~~D~I~~~~ 138 (197)
. +..-..+|+||+..
T Consensus 85 ~---~~dL~~adLVIaAT 99 (223)
T 3dfz_A 85 G---EEDLLNVFFIVVAT 99 (223)
T ss_dssp C---GGGSSSCSEEEECC
T ss_pred C---HhHhCCCCEEEECC
Confidence 2 12235689999765
No 449
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=89.31 E-value=5.6 Score=29.91 Aligned_cols=75 Identities=17% Similarity=0.114 Sum_probs=48.7
Q ss_pred CCCeEEEEeCCchHhHHH----HhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHh-------
Q psy4592 57 NPKKVLIVGGGDGGVARE----VLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMS------- 125 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~----l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~------- 125 (197)
.++.+|..|++.| ++.+ +++.+ .+|+.++.+++-++...+.+.. ...++.++.+|+.+.-.
T Consensus 10 ~~k~vlVTGas~g-IG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~Dv~~~~~v~~~~~~ 81 (264)
T 3ucx_A 10 TDKVVVISGVGPA-LGTTLARRCAEQG--ADLVLAARTVERLEDVAKQVTD-----TGRRALSVGTDITDDAQVAHLVDE 81 (264)
T ss_dssp TTCEEEEESCCTT-HHHHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHH-----TTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCcEEEEECCCcH-HHHHHHHHHHHCc--CEEEEEeCCHHHHHHHHHHHHh-----cCCcEEEEEcCCCCHHHHHHHHHH
Confidence 4568888888665 4444 44443 6899999998777665554432 23478888888764311
Q ss_pred --hcCCceeEEEECCC
Q psy4592 126 --EHQQEFDVIITDSS 139 (197)
Q Consensus 126 --~~~~~~D~I~~~~~ 139 (197)
..-++.|++|.+..
T Consensus 82 ~~~~~g~id~lv~nAg 97 (264)
T 3ucx_A 82 TMKAYGRVDVVINNAF 97 (264)
T ss_dssp HHHHTSCCSEEEECCC
T ss_pred HHHHcCCCcEEEECCC
Confidence 11357899999873
No 450
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=89.30 E-value=4.1 Score=30.89 Aligned_cols=78 Identities=9% Similarity=0.187 Sum_probs=46.8
Q ss_pred CCCeEEEEeCCchHhHHHHhcC--CCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHH------h---
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKH--PSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFM------S--- 125 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~--~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~------~--- 125 (197)
.++.+|..|++. +++.++++. ..+.+|+.++.+++-++...+.+.. ...++.++.+|+.+.- .
T Consensus 20 ~~k~vlVTGas~-gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~~ 93 (273)
T 1ae1_A 20 KGTTALVTGGSK-GIGYAIVEELAGLGARVYTCSRNEKELDECLEIWRE-----KGLNVEGSVCDLLSRTERDKLMQTVA 93 (273)
T ss_dssp TTCEEEEESCSS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-----TTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCcc-hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----cCCceEEEECCCCCHHHHHHHHHHHH
Confidence 356888888754 455544432 1126899999998766544443322 1246788888865321 1
Q ss_pred hcC-CceeEEEECCCC
Q psy4592 126 EHQ-QEFDVIITDSSD 140 (197)
Q Consensus 126 ~~~-~~~D~I~~~~~~ 140 (197)
..- +..|++|.+.-.
T Consensus 94 ~~~~g~id~lv~nAg~ 109 (273)
T 1ae1_A 94 HVFDGKLNILVNNAGV 109 (273)
T ss_dssp HHTTSCCCEEEECCCC
T ss_pred HHcCCCCcEEEECCCC
Confidence 112 678999998743
No 451
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=89.16 E-value=0.091 Score=41.50 Aligned_cols=88 Identities=16% Similarity=0.238 Sum_probs=56.7
Q ss_pred eEEEEeC--CchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHH----Hhh-cCCcee
Q psy4592 60 KVLIVGG--GDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRF----MSE-HQQEFD 132 (197)
Q Consensus 60 ~vLdiG~--G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~----~~~-~~~~~D 132 (197)
+||.+|+ |.|..+..+++..+ .++++++.+++-.+.+++. .. . .++ |..+. +.. ....+|
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~~G-a~vi~~~~~~~~~~~~~~l-Ga--------~-~v~--~~~~~~~~~~~~~~~~~~d 219 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNKRG-YDVVASTGNREAADYLKQL-GA--------S-EVI--SREDVYDGTLKALSKQQWQ 219 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHHHT-CCEEEEESSSSTHHHHHHH-TC--------S-EEE--EHHHHCSSCCCSSCCCCEE
T ss_pred eEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHc-CC--------c-EEE--ECCCchHHHHHHhhcCCcc
Confidence 8999997 45556666666555 5899999988888888763 21 1 111 21111 011 124699
Q ss_pred EEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 133 VIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 133 ~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
+|+.... ...++.+.+.|+++|.+++..
T Consensus 220 ~vid~~g-----------~~~~~~~~~~l~~~G~iv~~G 247 (330)
T 1tt7_A 220 GAVDPVG-----------GKQLASLLSKIQYGGSVAVSG 247 (330)
T ss_dssp EEEESCC-----------THHHHHHHTTEEEEEEEEECC
T ss_pred EEEECCc-----------HHHHHHHHHhhcCCCEEEEEe
Confidence 9885542 125688889999999998764
No 452
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=89.12 E-value=6 Score=30.00 Aligned_cols=78 Identities=13% Similarity=0.171 Sum_probs=46.8
Q ss_pred CCCeEEEEeCCchHhHHHHhcC--CCCccEEEEEc-------------CHHHHHHHHhhcCCCCCCCCCCCeEEEEcchH
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKH--PSVESAYLVEI-------------DNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGF 121 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~--~~~~~v~~ve~-------------~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~ 121 (197)
.++.+|..|++.| ++.++++. ....+++.++. +++-++...+.+.. ...++.++.+|+.
T Consensus 14 ~gk~~lVTGas~g-IG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~Dv~ 87 (280)
T 3pgx_A 14 QGRVAFITGAARG-QGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVED-----QGRKALTRVLDVR 87 (280)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHT-----TTCCEEEEECCTT
T ss_pred CCCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHh-----cCCeEEEEEcCCC
Confidence 4568888888665 44444432 11268989887 56555555444332 2357888888875
Q ss_pred HHH------h---hcCCceeEEEECCCC
Q psy4592 122 RFM------S---EHQQEFDVIITDSSD 140 (197)
Q Consensus 122 ~~~------~---~~~~~~D~I~~~~~~ 140 (197)
+.- . ..-++.|++|.+.-.
T Consensus 88 ~~~~v~~~~~~~~~~~g~id~lvnnAg~ 115 (280)
T 3pgx_A 88 DDAALRELVADGMEQFGRLDVVVANAGV 115 (280)
T ss_dssp CHHHHHHHHHHHHHHHCCCCEEEECCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 421 1 112478999998753
No 453
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=89.12 E-value=5.9 Score=29.91 Aligned_cols=78 Identities=17% Similarity=0.206 Sum_probs=47.7
Q ss_pred CCCeEEEEeCCchHhHHHHhcCC--CCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHH------h---
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKHP--SVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFM------S--- 125 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~~--~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~------~--- 125 (197)
.+++||..|++. +++.++++.. .+.+|++++.+++-.+...+.+.. ...++.++.+|+.+.- .
T Consensus 30 ~~k~vlITGasg-gIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~-----~~~~~~~~~~Dl~~~~~v~~~~~~~~ 103 (272)
T 1yb1_A 30 TGEIVLITGAGH-GIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKG-----LGAKVHTFVVDCSNREDIYSSAKKVK 103 (272)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-----TTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCc-hHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHh-----cCCeEEEEEeeCCCHHHHHHHHHHHH
Confidence 456888888654 5555554321 126899999988766554443332 1246888888865421 1
Q ss_pred hcCCceeEEEECCCC
Q psy4592 126 EHQQEFDVIITDSSD 140 (197)
Q Consensus 126 ~~~~~~D~I~~~~~~ 140 (197)
...+..|+||.+...
T Consensus 104 ~~~g~iD~li~~Ag~ 118 (272)
T 1yb1_A 104 AEIGDVSILVNNAGV 118 (272)
T ss_dssp HHTCCCSEEEECCCC
T ss_pred HHCCCCcEEEECCCc
Confidence 113478999998753
No 454
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=89.09 E-value=6 Score=29.99 Aligned_cols=109 Identities=15% Similarity=0.153 Sum_probs=59.4
Q ss_pred CCCeEEEEeCCchHhHHHHhcC--CCCccEEEEEcC-HHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHH------hh-
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKH--PSVESAYLVEID-NRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFM------SE- 126 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~--~~~~~v~~ve~~-~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~------~~- 126 (197)
.++.+|..|++.| ++.++++. ....++..++.+ ++..+...+.+.. ...++.++.+|+.+.- ..
T Consensus 30 ~gk~~lVTGas~G-IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~-----~~~~~~~~~~Dv~d~~~v~~~~~~~ 103 (271)
T 3v2g_A 30 AGKTAFVTGGSRG-IGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQ-----AGGRAVAIRADNRDAEAIEQAIRET 103 (271)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-----TTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHh-----cCCcEEEEECCCCCHHHHHHHHHHH
Confidence 4568888888664 44444432 112678777654 3444433333322 1346788888876421 11
Q ss_pred --cCCceeEEEECCCCCCCCC-cccc--------------cHHHHHHHHhhcCCCcEEEEEc
Q psy4592 127 --HQQEFDVIITDSSDPVGPA-ESLF--------------QASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 127 --~~~~~D~I~~~~~~~~~~~-~~l~--------------~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
.-++.|++|.+.-...... .... .-.+.+.+.+.|+++|.++..+
T Consensus 104 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~is 165 (271)
T 3v2g_A 104 VEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIG 165 (271)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEEC
T ss_pred HHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 1247899999875322111 1100 0124556677888889877764
No 455
>4gua_A Non-structural polyprotein; viral precursor polyprotein, protease, zinc-binding, hydrola; HET: MES; 2.85A {Sindbis virus}
Probab=89.08 E-value=0.39 Score=40.87 Aligned_cols=67 Identities=15% Similarity=0.233 Sum_probs=43.9
Q ss_pred CCceeEEEECCCCCCCCCc-cccc------HHHHHHHHhhcCCCcEEEEEcCCCCcChhHHHHHHHHHHhhCCccc
Q psy4592 128 QQEFDVIITDSSDPVGPAE-SLFQ------ASYFELMSRALRPGGIVCSQAGTLWYSLDCVGNTLQHCASVFPRLH 196 (197)
Q Consensus 128 ~~~~D~I~~~~~~~~~~~~-~l~~------~~~~~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~f~~v~ 196 (197)
.++||+|++|.-.+...+. +... ..+-..+.++|||||.+++..+. +-...-+.+...+.+.|..++
T Consensus 219 ~~ryDlvfvn~~t~yr~HHyqQCeDHa~~l~ml~~~al~~l~pGGt~v~~~YG--yADr~sE~vv~alaRkF~~~r 292 (670)
T 4gua_A 219 QARYDLVFINIGTKYRNHHFQQCEDHAATLKTLSRSALNCLNPGGTLVVKSYG--YADRNSEDVVTALARKFVRVS 292 (670)
T ss_dssp CCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESC--CCSHHHHHHHHHHHHTEEEEE
T ss_pred CCcccEEEEecCCCcccchHHHHHHHHHHHHHHhHHHHhhcCCCceEEEEEee--ccccchHHHHHHHHhheeeee
Confidence 4699999999866543221 1110 22445677999999999987643 334555667777777776655
No 456
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=89.01 E-value=3.9 Score=27.70 Aligned_cols=85 Identities=22% Similarity=0.301 Sum_probs=48.6
Q ss_pred CCeEEEEeCCchHhHHHHhc---CCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEE-EEcchHHHHhhcCCceeE
Q psy4592 58 PKKVLIVGGGDGGVAREVLK---HPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTV-HVGDGFRFMSEHQQEFDV 133 (197)
Q Consensus 58 ~~~vLdiG~G~G~~~~~l~~---~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~-~~~d~~~~~~~~~~~~D~ 133 (197)
+++|+.+|+|. ++..+++ ..+ .+++.++.+++-.+...+.+. ... ...+..+.+. .+|+
T Consensus 21 ~~~v~iiG~G~--iG~~~a~~l~~~g-~~v~v~~r~~~~~~~~a~~~~----------~~~~~~~~~~~~~~----~~Di 83 (144)
T 3oj0_A 21 GNKILLVGNGM--LASEIAPYFSYPQ-YKVTVAGRNIDHVRAFAEKYE----------YEYVLINDIDSLIK----NNDV 83 (144)
T ss_dssp CCEEEEECCSH--HHHHHGGGCCTTT-CEEEEEESCHHHHHHHHHHHT----------CEEEECSCHHHHHH----TCSE
T ss_pred CCEEEEECCCH--HHHHHHHHHHhCC-CEEEEEcCCHHHHHHHHHHhC----------CceEeecCHHHHhc----CCCE
Confidence 67999999854 4444443 223 459999999877654333332 122 2344444443 4899
Q ss_pred EEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEE
Q psy4592 134 IITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQ 170 (197)
Q Consensus 134 I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~ 170 (197)
|+...+.+.. +.. ...|++|+.++-.
T Consensus 84 vi~at~~~~~----~~~-------~~~l~~g~~vid~ 109 (144)
T 3oj0_A 84 IITATSSKTP----IVE-------ERSLMPGKLFIDL 109 (144)
T ss_dssp EEECSCCSSC----SBC-------GGGCCTTCEEEEC
T ss_pred EEEeCCCCCc----Eee-------HHHcCCCCEEEEc
Confidence 9987754321 111 2457777666543
No 457
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=89.00 E-value=4.3 Score=31.72 Aligned_cols=106 Identities=12% Similarity=0.138 Sum_probs=55.0
Q ss_pred eEEEEeCCchHhHHH--HhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEE-cchHHHHhhcCCceeEEEE
Q psy4592 60 KVLIVGGGDGGVARE--VLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHV-GDGFRFMSEHQQEFDVIIT 136 (197)
Q Consensus 60 ~vLdiG~G~G~~~~~--l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~-~d~~~~~~~~~~~~D~I~~ 136 (197)
+|..+|+|.-+.+.. ++......+++.+|++++.++.....+...... .....++.. .|..+ + ...|+|+.
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~-~~~~~~i~~t~d~~~-l----~~aDvVii 75 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPV-GLFDTKVTGSNDYAD-T----ANSDIVII 75 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHH-HTCCCEEEEESCGGG-G----TTCSEEEE
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhc-ccCCcEEEECCCHHH-H----CCCCEEEE
Confidence 688999976544433 333312368999999987666332111100000 011223332 55433 2 45899999
Q ss_pred CCCCCCCCCc---ccc--c----HHHHHHHHhhcCCCcEEEEEcC
Q psy4592 137 DSSDPVGPAE---SLF--Q----ASYFELMSRALRPGGIVCSQAG 172 (197)
Q Consensus 137 ~~~~~~~~~~---~l~--~----~~~~~~~~~~LkpgG~l~~~~~ 172 (197)
..+.+..+.. .+. + .+..+.+.+. .|++.+++.++
T Consensus 76 av~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~~~~~viv~tN 119 (310)
T 1guz_A 76 TAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKH-SKNPIIIVVSN 119 (310)
T ss_dssp CCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CSSCEEEECCS
T ss_pred eCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCcEEEEEcC
Confidence 8765543321 110 1 2344445555 69998887644
No 458
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=88.91 E-value=6.1 Score=29.85 Aligned_cols=69 Identities=25% Similarity=0.491 Sum_probs=45.2
Q ss_pred CeEEEEeCCchHhHHHH----hcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHh---------
Q psy4592 59 KKVLIVGGGDGGVAREV----LKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMS--------- 125 (197)
Q Consensus 59 ~~vLdiG~G~G~~~~~l----~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~--------- 125 (197)
++||.-|++.| ++.++ ++.+ .+|..+|.+++..+...+. ..++..+.+|+.+.-.
T Consensus 3 K~vlVTGas~G-IG~aia~~la~~G--a~V~~~~~~~~~~~~~~~~---------~~~~~~~~~Dv~~~~~v~~~v~~~~ 70 (247)
T 3ged_A 3 RGVIVTGGGHG-IGKQICLDFLEAG--DKVCFIDIDEKRSADFAKE---------RPNLFYFHGDVADPLTLKKFVEYAM 70 (247)
T ss_dssp CEEEEESTTSH-HHHHHHHHHHHTT--CEEEEEESCHHHHHHHHTT---------CTTEEEEECCTTSHHHHHHHHHHHH
T ss_pred CEEEEecCCCH-HHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHh---------cCCEEEEEecCCCHHHHHHHHHHHH
Confidence 57888888776 44444 3343 7999999998776654432 2467788888764211
Q ss_pred hcCCceeEEEECCC
Q psy4592 126 EHQQEFDVIITDSS 139 (197)
Q Consensus 126 ~~~~~~D~I~~~~~ 139 (197)
..-++.|++|.|.-
T Consensus 71 ~~~g~iDiLVNNAG 84 (247)
T 3ged_A 71 EKLQRIDVLVNNAC 84 (247)
T ss_dssp HHHSCCCEEEECCC
T ss_pred HHcCCCCEEEECCC
Confidence 11357899998874
No 459
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=88.91 E-value=5.3 Score=31.15 Aligned_cols=80 Identities=13% Similarity=0.156 Sum_probs=48.8
Q ss_pred CCCeEEEEeCCchHhHHHHhcCC--CCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHH------h---
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKHP--SVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFM------S--- 125 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~~--~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~------~--- 125 (197)
.++.||..|++.| ++.++++.. .+.+|++++.+++-++.+.+.+...+ ...++.++.+|+.+.- .
T Consensus 7 ~~k~vlVTGas~g-IG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~---~~~~~~~~~~Dl~~~~~v~~~~~~~~ 82 (319)
T 3ioy_A 7 AGRTAFVTGGANG-VGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEG---SGPEVMGVQLDVASREGFKMAADEVE 82 (319)
T ss_dssp TTCEEEEETTTST-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHT---CGGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEcCCchH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC---CCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 4568998888654 444444321 12689999999877665555433210 1236888888876421 1
Q ss_pred hcCCceeEEEECCCC
Q psy4592 126 EHQQEFDVIITDSSD 140 (197)
Q Consensus 126 ~~~~~~D~I~~~~~~ 140 (197)
...+..|++|.+.-.
T Consensus 83 ~~~g~id~lv~nAg~ 97 (319)
T 3ioy_A 83 ARFGPVSILCNNAGV 97 (319)
T ss_dssp HHTCCEEEEEECCCC
T ss_pred HhCCCCCEEEECCCc
Confidence 113578999998753
No 460
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=88.90 E-value=3.3 Score=31.14 Aligned_cols=78 Identities=10% Similarity=0.161 Sum_probs=48.7
Q ss_pred CCCeEEEEeCCchHhHHHHhcC--CCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHh---------
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKH--PSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMS--------- 125 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~--~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~--------- 125 (197)
.++.||..|++. +++.++++. ..+.+|+.++.+++-++...+.+.. ...++.++.+|+.+.-.
T Consensus 28 ~~k~vlITGas~-gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~D~~~~~~v~~~~~~~~ 101 (262)
T 3rkr_A 28 SGQVAVVTGASR-GIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVA-----AGGEAESHACDLSHSDAIAAFATGVL 101 (262)
T ss_dssp TTCEEEESSTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-----TTCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCC-hHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHH-----hCCceeEEEecCCCHHHHHHHHHHHH
Confidence 346788888754 455554432 1126899999998877666555432 23468888888754211
Q ss_pred hcCCceeEEEECCCC
Q psy4592 126 EHQQEFDVIITDSSD 140 (197)
Q Consensus 126 ~~~~~~D~I~~~~~~ 140 (197)
...++.|++|.+...
T Consensus 102 ~~~g~id~lv~~Ag~ 116 (262)
T 3rkr_A 102 AAHGRCDVLVNNAGV 116 (262)
T ss_dssp HHHSCCSEEEECCCC
T ss_pred HhcCCCCEEEECCCc
Confidence 112478999998754
No 461
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=88.86 E-value=3.4 Score=31.39 Aligned_cols=77 Identities=16% Similarity=0.166 Sum_probs=47.2
Q ss_pred CCeEEEEeCCchHhHHHHhcC--CCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHH------h---h
Q psy4592 58 PKKVLIVGGGDGGVAREVLKH--PSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFM------S---E 126 (197)
Q Consensus 58 ~~~vLdiG~G~G~~~~~l~~~--~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~------~---~ 126 (197)
++.+|..|++.| ++.++++. ..+.+|+.++.+++-++.+.+.+.. ...++.++.+|+.+.- . .
T Consensus 4 ~k~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~-----~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 77 (264)
T 3tfo_A 4 DKVILITGASGG-IGEGIARELGVAGAKILLGARRQARIEAIATEIRD-----AGGTALAQVLDVTDRHSVAAFAQAAVD 77 (264)
T ss_dssp TCEEEESSTTSH-HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHH-----TTCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEeCCccH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-----cCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 457888887654 55444432 1126899999998777666554432 1346778888875321 1 1
Q ss_pred cCCceeEEEECCCC
Q psy4592 127 HQQEFDVIITDSSD 140 (197)
Q Consensus 127 ~~~~~D~I~~~~~~ 140 (197)
.-++.|++|.+.-.
T Consensus 78 ~~g~iD~lVnnAG~ 91 (264)
T 3tfo_A 78 TWGRIDVLVNNAGV 91 (264)
T ss_dssp HHSCCCEEEECCCC
T ss_pred HcCCCCEEEECCCC
Confidence 12478999988743
No 462
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=88.86 E-value=5.2 Score=30.73 Aligned_cols=109 Identities=14% Similarity=0.134 Sum_probs=58.8
Q ss_pred CCCeEEEEeCCchHhHHHHhcC--CCCccEEEEEcCH--HHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHH------h-
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKH--PSVESAYLVEIDN--RVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFM------S- 125 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~--~~~~~v~~ve~~~--~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~------~- 125 (197)
.++.+|..|++.| ++.++++. ....+++.++.+. ...+...+.... ...++.++.+|+.+.- .
T Consensus 48 ~~k~vlVTGas~G-IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~Dv~d~~~v~~~~~~ 121 (294)
T 3r3s_A 48 KDRKALVTGGDSG-IGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEE-----CGRKAVLLPGDLSDESFARSLVHK 121 (294)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHH-----TTCCEEECCCCTTSHHHHHHHHHH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHH-----cCCcEEEEEecCCCHHHHHHHHHH
Confidence 4568888887654 55544432 1126788887762 333333332222 1246778888765421 1
Q ss_pred --hcCCceeEEEECCCCCC-CCC-ccccc--------------HHHHHHHHhhcCCCcEEEEEc
Q psy4592 126 --EHQQEFDVIITDSSDPV-GPA-ESLFQ--------------ASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 126 --~~~~~~D~I~~~~~~~~-~~~-~~l~~--------------~~~~~~~~~~LkpgG~l~~~~ 171 (197)
..-+..|+++.+.-... ... ..+.. -.+.+.+...++++|.++..+
T Consensus 122 ~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~is 185 (294)
T 3r3s_A 122 AREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTS 185 (294)
T ss_dssp HHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEEC
T ss_pred HHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEEC
Confidence 11257899999875322 111 11100 124556667888889877765
No 463
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=88.81 E-value=4.1 Score=30.56 Aligned_cols=78 Identities=12% Similarity=0.196 Sum_probs=46.7
Q ss_pred CCCeEEEEeCCchHhHHHHhcC--CCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHH------hh--
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKH--PSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFM------SE-- 126 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~--~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~------~~-- 126 (197)
.+++||..|++. +++.++++. ....+|+.++.+++-++...+.+.. ...++.++.+|+.+.- ..
T Consensus 8 ~~k~vlVTGas~-giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~~ 81 (260)
T 2ae2_A 8 EGCTALVTGGSR-GIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRS-----KGFKVEASVCDLSSRSERQELMNTVA 81 (260)
T ss_dssp TTCEEEEESCSS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-----TTCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCc-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----cCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 346888888754 455444432 1126899999988766544443322 1246778888876421 11
Q ss_pred -cC-CceeEEEECCCC
Q psy4592 127 -HQ-QEFDVIITDSSD 140 (197)
Q Consensus 127 -~~-~~~D~I~~~~~~ 140 (197)
.- +..|++|.+.-.
T Consensus 82 ~~~~g~id~lv~~Ag~ 97 (260)
T 2ae2_A 82 NHFHGKLNILVNNAGI 97 (260)
T ss_dssp HHTTTCCCEEEECCCC
T ss_pred HHcCCCCCEEEECCCC
Confidence 12 679999998753
No 464
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=88.70 E-value=4.8 Score=30.28 Aligned_cols=78 Identities=14% Similarity=0.176 Sum_probs=48.3
Q ss_pred CCCeEEEEeCCchHhHHHHhcC--CCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHh---------
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKH--PSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMS--------- 125 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~--~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~--------- 125 (197)
.++++|..|++. +++.++++. ....+|+.++.+++-++.+.+.+... ...++.++.+|+.+.-.
T Consensus 9 ~~k~vlVTGas~-gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~~Dv~~~~~v~~~~~~~~ 83 (262)
T 3pk0_A 9 QGRSVVVTGGTK-GIGRGIATVFARAGANVAVAGRSTADIDACVADLDQL----GSGKVIGVQTDVSDRAQCDALAGRAV 83 (262)
T ss_dssp TTCEEEETTCSS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT----SSSCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCEEEEECCCc-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhh----CCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 456788777755 455544432 11268999999988776655544331 22478888888764211
Q ss_pred hcCCceeEEEECCC
Q psy4592 126 EHQQEFDVIITDSS 139 (197)
Q Consensus 126 ~~~~~~D~I~~~~~ 139 (197)
..-++.|++|.+.-
T Consensus 84 ~~~g~id~lvnnAg 97 (262)
T 3pk0_A 84 EEFGGIDVVCANAG 97 (262)
T ss_dssp HHHSCCSEEEECCC
T ss_pred HHhCCCCEEEECCC
Confidence 11247899999864
No 465
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=88.38 E-value=1.8 Score=34.14 Aligned_cols=99 Identities=19% Similarity=0.181 Sum_probs=56.9
Q ss_pred CeEEEEeCCchH--hHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCC-C-CCCCC-CCCeEEEEcchHHHHhhcCCceeE
Q psy4592 59 KKVLIVGGGDGG--VAREVLKHPSVESAYLVEIDNRVIEVSKKYLPG-M-AVGLS-DPRLTVHVGDGFRFMSEHQQEFDV 133 (197)
Q Consensus 59 ~~vLdiG~G~G~--~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~-~-~~~~~-~~~~~~~~~d~~~~~~~~~~~~D~ 133 (197)
.+|..||+|.-+ ++..+.+. + .+|++++.+++.++..++.... . ..... ..++.....|..+.+ ..+|+
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~-g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~D~ 78 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALK-G-QSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAV----KDADV 78 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-T-CEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHH----TTCSE
T ss_pred CeEEEECCCHHHHHHHHHHHhC-C-CEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHH----hcCCE
Confidence 589999998633 22334333 2 5799999998877766554210 0 00000 001112234544433 35899
Q ss_pred EEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEE
Q psy4592 134 IITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQ 170 (197)
Q Consensus 134 I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~ 170 (197)
|+...+... ..+.++.+...++++..++..
T Consensus 79 vi~~v~~~~-------~~~~~~~l~~~l~~~~~vv~~ 108 (359)
T 1bg6_A 79 ILIVVPAIH-------HASIAANIASYISEGQLIILN 108 (359)
T ss_dssp EEECSCGGG-------HHHHHHHHGGGCCTTCEEEES
T ss_pred EEEeCCchH-------HHHHHHHHHHhCCCCCEEEEc
Confidence 998775221 166788888889988766543
No 466
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=88.38 E-value=3.3 Score=30.81 Aligned_cols=78 Identities=13% Similarity=0.140 Sum_probs=49.0
Q ss_pred CCCeEEEEeCCchHhHHHHhcC--CCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHh---------
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKH--PSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMS--------- 125 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~--~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~--------- 125 (197)
.++.||..|++.| ++.++++. ....+++.++.+++..+...+.+.. ...++.++.+|+.+.-.
T Consensus 8 ~~k~vlITGas~g-iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~~ 81 (253)
T 3qiv_A 8 ENKVGIVTGSGGG-IGQAYAEALAREGAAVVVADINAEAAEAVAKQIVA-----DGGTAISVAVDVSDPESAKAMADRTL 81 (253)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-----TTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCh-HHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHh-----cCCcEEEEEccCCCHHHHHHHHHHHH
Confidence 4568888887654 44444432 1126899999998877666554432 23468888888764311
Q ss_pred hcCCceeEEEECCCC
Q psy4592 126 EHQQEFDVIITDSSD 140 (197)
Q Consensus 126 ~~~~~~D~I~~~~~~ 140 (197)
...++.|++|.+...
T Consensus 82 ~~~g~id~li~~Ag~ 96 (253)
T 3qiv_A 82 AEFGGIDYLVNNAAI 96 (253)
T ss_dssp HHHSCCCEEEECCCC
T ss_pred HHcCCCCEEEECCCc
Confidence 112478999998743
No 467
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=88.33 E-value=0.85 Score=35.85 Aligned_cols=99 Identities=16% Similarity=0.149 Sum_probs=56.5
Q ss_pred CCCeEEEEeCCchHhH--HHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCC-CCC-CCCeEEEEcchHHHHhhcCCcee
Q psy4592 57 NPKKVLIVGGGDGGVA--REVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAV-GLS-DPRLTVHVGDGFRFMSEHQQEFD 132 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~--~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~-~~~-~~~~~~~~~d~~~~~~~~~~~~D 132 (197)
...+|..||+|.-+.+ ..+.+.+ ..|+.+ .+++.++..++.--.... +.. ..++.. ..|..+ ...+|
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G--~~V~l~-~~~~~~~~i~~~g~~~~~~~~~~~~~~~~-~~~~~~-----~~~~D 88 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAG--HEVILI-ARPQHVQAIEATGLRLETQSFDEQVKVSA-SSDPSA-----VQGAD 88 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTT--CEEEEE-CCHHHHHHHHHHCEEEECSSCEEEECCEE-ESCGGG-----GTTCS
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCC--CeEEEE-EcHhHHHHHHhCCeEEEcCCCcEEEeeee-eCCHHH-----cCCCC
Confidence 4569999999865433 3344442 588899 888887777653111000 000 001111 233221 24689
Q ss_pred EEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 133 VIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 133 ~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
+|+...+.. . ..+.++.+...++++..++...
T Consensus 89 ~vilavk~~-----~--~~~~l~~l~~~l~~~~~iv~~~ 120 (318)
T 3hwr_A 89 LVLFCVKST-----D--TQSAALAMKPALAKSALVLSLQ 120 (318)
T ss_dssp EEEECCCGG-----G--HHHHHHHHTTTSCTTCEEEEEC
T ss_pred EEEEEcccc-----c--HHHHHHHHHHhcCCCCEEEEeC
Confidence 999877532 1 2678899999999988766543
No 468
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=88.32 E-value=2.1 Score=34.07 Aligned_cols=95 Identities=15% Similarity=0.179 Sum_probs=56.0
Q ss_pred CCCCeEEEEeCCc-hHhHHHHhcCC-CCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhh-c-CCce
Q psy4592 56 PNPKKVLIVGGGD-GGVAREVLKHP-SVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSE-H-QQEF 131 (197)
Q Consensus 56 ~~~~~vLdiG~G~-G~~~~~l~~~~-~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~-~~~~ 131 (197)
+.+.+||.+|+|. |.++..+++.. + .++++++.+++-.+.+++. .. ..-+.... +..+.+.. . ...+
T Consensus 185 ~~g~~VlV~GaG~vG~~avqlak~~~G-a~Vi~~~~~~~~~~~~~~l-Ga------~~vi~~~~-~~~~~v~~~~~g~g~ 255 (359)
T 1h2b_A 185 YPGAYVAIVGVGGLGHIAVQLLKVMTP-ATVIALDVKEEKLKLAERL-GA------DHVVDARR-DPVKQVMELTRGRGV 255 (359)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHCC-CEEEEEESSHHHHHHHHHT-TC------SEEEETTS-CHHHHHHHHTTTCCE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEEeCCHHHHHHHHHh-CC------CEEEeccc-hHHHHHHHHhCCCCC
Confidence 4668999999852 33445566654 4 6899999999988888763 21 10011100 11222222 2 2379
Q ss_pred eEEEECCCCCCCCCcccccHH--HHHHHHhhcCCCcEEEEEc
Q psy4592 132 DVIITDSSDPVGPAESLFQAS--YFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 132 D~I~~~~~~~~~~~~~l~~~~--~~~~~~~~LkpgG~l~~~~ 171 (197)
|+|+-... . .. .++.+.+. ++|.+++..
T Consensus 256 Dvvid~~G-----~-----~~~~~~~~~~~~--~~G~~v~~g 285 (359)
T 1h2b_A 256 NVAMDFVG-----S-----QATVDYTPYLLG--RMGRLIIVG 285 (359)
T ss_dssp EEEEESSC-----C-----HHHHHHGGGGEE--EEEEEEECC
T ss_pred cEEEECCC-----C-----chHHHHHHHhhc--CCCEEEEEe
Confidence 99986542 1 22 45566666 899888754
No 469
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=88.30 E-value=2.3 Score=33.45 Aligned_cols=107 Identities=16% Similarity=0.216 Sum_probs=51.2
Q ss_pred CCCeEEEEeCCchHhHHH--HhcCCCCccEEEEEcCHHHHHH-HHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeE
Q psy4592 57 NPKKVLIVGGGDGGVARE--VLKHPSVESAYLVEIDNRVIEV-SKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDV 133 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~--l~~~~~~~~v~~ve~~~~~~~~-a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~ 133 (197)
++.+|..+|+|.=+.+.. ++...-..+++.+|++++.++- +....... .+. .++++..+|... -...|+
T Consensus 6 ~~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~--~~~-~~~~i~~~~~~a-----~~~aDv 77 (318)
T 1y6j_A 6 SRSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGL--PFM-GQMSLYAGDYSD-----VKDCDV 77 (318)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSC--CCT-TCEEEC--CGGG-----GTTCSE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhH--Hhc-CCeEEEECCHHH-----hCCCCE
Confidence 456899999864333322 2233223489999999865442 22221110 011 355555444221 245799
Q ss_pred EEECCCCCCCCCc---cc--cc----HHHHHHHHhhcCCCcEEEEEcC
Q psy4592 134 IITDSSDPVGPAE---SL--FQ----ASYFELMSRALRPGGIVCSQAG 172 (197)
Q Consensus 134 I~~~~~~~~~~~~---~l--~~----~~~~~~~~~~LkpgG~l~~~~~ 172 (197)
|+.....+..+.. .+ .+ .+..+.+.+. .|++.+++.++
T Consensus 78 Vii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~viv~tN 124 (318)
T 1y6j_A 78 IVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKY-YNHGVILVVSN 124 (318)
T ss_dssp EEECCCC------CHHHHHHHHHHHHHHHHHHHHHH-CCSCEEEECSS
T ss_pred EEEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHh-CCCcEEEEecC
Confidence 9987755442221 00 00 2344455555 79999888543
No 470
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=88.05 E-value=3.4 Score=26.45 Aligned_cols=69 Identities=16% Similarity=0.223 Sum_probs=41.8
Q ss_pred CCeEEEEeCCchHhHHHHhc---CCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHH--HhhcCCcee
Q psy4592 58 PKKVLIVGGGDGGVAREVLK---HPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRF--MSEHQQEFD 132 (197)
Q Consensus 58 ~~~vLdiG~G~G~~~~~l~~---~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~D 132 (197)
.++|+.+|+| .++..+.+ ..+..++++++.+++-.+.++. ..+.+...|..+. +...-..+|
T Consensus 5 ~~~v~I~G~G--~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~-----------~~~~~~~~d~~~~~~~~~~~~~~d 71 (118)
T 3ic5_A 5 RWNICVVGAG--KIGQMIAALLKTSSNYSVTVADHDLAALAVLNR-----------MGVATKQVDAKDEAGLAKALGGFD 71 (118)
T ss_dssp CEEEEEECCS--HHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHT-----------TTCEEEECCTTCHHHHHHHTTTCS
T ss_pred cCeEEEECCC--HHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHh-----------CCCcEEEecCCCHHHHHHHHcCCC
Confidence 3589999984 44443332 2233689999999887665541 1345566665432 222235789
Q ss_pred EEEECCC
Q psy4592 133 VIITDSS 139 (197)
Q Consensus 133 ~I~~~~~ 139 (197)
+|+...+
T Consensus 72 ~vi~~~~ 78 (118)
T 3ic5_A 72 AVISAAP 78 (118)
T ss_dssp EEEECSC
T ss_pred EEEECCC
Confidence 9998763
No 471
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=88.04 E-value=2.7 Score=32.02 Aligned_cols=78 Identities=10% Similarity=0.127 Sum_probs=47.7
Q ss_pred CCCeEEEEeCCchHhHHHHhcC--CCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHh---------
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKH--PSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMS--------- 125 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~--~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~--------- 125 (197)
.++.+|..|++.| ++.++++. ....+|+.++.+++-++...+.+.. ...++.++.+|+.+.-.
T Consensus 25 ~gk~~lVTGas~g-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~-----~~~~~~~~~~Dv~d~~~v~~~~~~~~ 98 (271)
T 4ibo_A 25 GGRTALVTGSSRG-LGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRN-----VGHDAEAVAFDVTSESEIIEAFARLD 98 (271)
T ss_dssp TTCEEEETTCSSH-HHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHH-----TTCCEEECCCCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----cCCceEEEEcCCCCHHHHHHHHHHHH
Confidence 4568888886554 55444432 1126899999988776655554432 23467788887654211
Q ss_pred hcCCceeEEEECCCC
Q psy4592 126 EHQQEFDVIITDSSD 140 (197)
Q Consensus 126 ~~~~~~D~I~~~~~~ 140 (197)
...++.|++|.+.-.
T Consensus 99 ~~~g~iD~lv~nAg~ 113 (271)
T 4ibo_A 99 EQGIDVDILVNNAGI 113 (271)
T ss_dssp HHTCCCCEEEECCCC
T ss_pred HHCCCCCEEEECCCC
Confidence 123578999998753
No 472
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=88.03 E-value=4.3 Score=33.69 Aligned_cols=100 Identities=19% Similarity=0.316 Sum_probs=59.1
Q ss_pred CeEEEEeCCchH--hHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCC----------C-CCCCCCCCeEEEEcchHHHHh
Q psy4592 59 KKVLIVGGGDGG--VAREVLKHPSVESAYLVEIDNRVIEVSKKYLPG----------M-AVGLSDPRLTVHVGDGFRFMS 125 (197)
Q Consensus 59 ~~vLdiG~G~G~--~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~----------~-~~~~~~~~~~~~~~d~~~~~~ 125 (197)
++|..||+|.=+ ++..+++. + ..|+.+|.+++.++.+++.... . ..........+ ..|. +.
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~-G-~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i-~~~~-~~-- 111 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARV-G-ISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSST-KE-- 111 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-T-CEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEE-ESCG-GG--
T ss_pred CEEEEECcCHHHHHHHHHHHhC-C-CeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhh-cCCH-HH--
Confidence 579999999733 33334444 3 6899999999888766542110 0 00001112233 4553 21
Q ss_pred hcCCceeEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 126 EHQQEFDVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 126 ~~~~~~D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
-...|+||...+. + .-....+++++...++|+.+++.++
T Consensus 112 --~~~aDlVIeaVpe----~-~~~k~~v~~~l~~~~~~~~ii~snT 150 (463)
T 1zcj_A 112 --LSTVDLVVEAVFE----D-MNLKKKVFAELSALCKPGAFLCTNT 150 (463)
T ss_dssp --GTTCSEEEECCCS----C-HHHHHHHHHHHHHHSCTTCEEEECC
T ss_pred --HCCCCEEEEcCCC----C-HHHHHHHHHHHHhhCCCCeEEEeCC
Confidence 2458999988752 1 1112567888889999988877644
No 473
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=88.00 E-value=3.9 Score=32.20 Aligned_cols=108 Identities=14% Similarity=0.142 Sum_probs=55.8
Q ss_pred CCeEEEEeCCchHhHHH--HhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEE-cchHHHHhhcCCceeEE
Q psy4592 58 PKKVLIVGGGDGGVARE--VLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHV-GDGFRFMSEHQQEFDVI 134 (197)
Q Consensus 58 ~~~vLdiG~G~G~~~~~--l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~-~d~~~~~~~~~~~~D~I 134 (197)
..+|..+|+|.=+.+.. ++.. +...++.+|++++.++.....+...... .....++.. .|. +.+ ...|+|
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~-g~~~v~L~Di~~~~l~~~~~~l~~~~~~-~~~~~~i~~t~d~-~al----~~aD~V 76 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQK-NLGDVVLFDIVKNMPHGKALDTSHTNVM-AYSNCKVSGSNTY-DDL----AGADVV 76 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCCEEEEECSSSSHHHHHHHHHHTHHHH-HTCCCCEEEECCG-GGG----TTCSEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHHHhhhhh-cCCCcEEEECCCH-HHh----CCCCEE
Confidence 35899999975443332 2223 3235999999987666332222110000 011223333 554 222 347999
Q ss_pred EECCCCCCCCC--------ccc------ccHHHHHHHHhhcCCCcEEEEEcCC
Q psy4592 135 ITDSSDPVGPA--------ESL------FQASYFELMSRALRPGGIVCSQAGT 173 (197)
Q Consensus 135 ~~~~~~~~~~~--------~~l------~~~~~~~~~~~~LkpgG~l~~~~~~ 173 (197)
+.....+..+. ..+ .-.+.++.+.+.. |++.+++.++.
T Consensus 77 i~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~tNP 128 (322)
T 1t2d_A 77 IVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNC-PNAFIIVVTNP 128 (322)
T ss_dssp EECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEECSSS
T ss_pred EEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCC
Confidence 98763322211 111 1144566666664 99998876543
No 474
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=87.98 E-value=2.2 Score=34.16 Aligned_cols=69 Identities=25% Similarity=0.367 Sum_probs=40.1
Q ss_pred CCCeEEEEeCCchHhHHHHhcC-CCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHH--HHhhcCCceeE
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKH-PSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFR--FMSEHQQEFDV 133 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~-~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~D~ 133 (197)
..++||.+||| .++..+++. .....++.+|.+.+-++.+++. ...+..|+.+ .+...-...|+
T Consensus 15 ~~mkilvlGaG--~vG~~~~~~L~~~~~v~~~~~~~~~~~~~~~~------------~~~~~~d~~d~~~l~~~~~~~Dv 80 (365)
T 3abi_A 15 RHMKVLILGAG--NIGRAIAWDLKDEFDVYIGDVNNENLEKVKEF------------ATPLKVDASNFDKLVEVMKEFEL 80 (365)
T ss_dssp -CCEEEEECCS--HHHHHHHHHHTTTSEEEEEESCHHHHHHHTTT------------SEEEECCTTCHHHHHHHHTTCSE
T ss_pred CccEEEEECCC--HHHHHHHHHHhcCCCeEEEEcCHHHHHHHhcc------------CCcEEEecCCHHHHHHHHhCCCE
Confidence 45689999985 333333321 1225789999999887766443 2233444432 22222356899
Q ss_pred EEECCC
Q psy4592 134 IITDSS 139 (197)
Q Consensus 134 I~~~~~ 139 (197)
|++..+
T Consensus 81 Vi~~~p 86 (365)
T 3abi_A 81 VIGALP 86 (365)
T ss_dssp EEECCC
T ss_pred EEEecC
Confidence 998765
No 475
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=87.94 E-value=5.8 Score=29.22 Aligned_cols=95 Identities=20% Similarity=0.163 Sum_probs=58.4
Q ss_pred CCeEEEEeCCchHhHHHHhcCC--CCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHH--HHhh-cCCcee
Q psy4592 58 PKKVLIVGGGDGGVAREVLKHP--SVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFR--FMSE-HQQEFD 132 (197)
Q Consensus 58 ~~~vLdiG~G~G~~~~~l~~~~--~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~-~~~~~D 132 (197)
..+|+.+|+| .++..+++.. ... ++++|.+++.++.++ . .+.++.+|+.+ .+.. .-..+|
T Consensus 9 ~~~viI~G~G--~~G~~la~~L~~~g~-v~vid~~~~~~~~~~---~---------~~~~i~gd~~~~~~l~~a~i~~ad 73 (234)
T 2aef_A 9 SRHVVICGWS--ESTLECLRELRGSEV-FVLAEDENVRKKVLR---S---------GANFVHGDPTRVSDLEKANVRGAR 73 (234)
T ss_dssp -CEEEEESCC--HHHHHHHHHSTTSEE-EEEESCGGGHHHHHH---T---------TCEEEESCTTCHHHHHHTTCTTCS
T ss_pred CCEEEEECCC--hHHHHHHHHHHhCCe-EEEEECCHHHHHHHh---c---------CCeEEEcCCCCHHHHHhcCcchhc
Confidence 4589999986 4444444321 225 999999998776554 1 35678888763 2332 245789
Q ss_pred EEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEcCCC
Q psy4592 133 VIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQAGTL 174 (197)
Q Consensus 133 ~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~~~~ 174 (197)
.|++..+. .. .........+.+.|+..++....++
T Consensus 74 ~vi~~~~~-----d~--~n~~~~~~a~~~~~~~~iia~~~~~ 108 (234)
T 2aef_A 74 AVIVDLES-----DS--ETIHCILGIRKIDESVRIIAEAERY 108 (234)
T ss_dssp EEEECCSC-----HH--HHHHHHHHHHHHCSSSEEEEECSSG
T ss_pred EEEEcCCC-----cH--HHHHHHHHHHHHCCCCeEEEEECCH
Confidence 99976531 11 0223445566788887888766543
No 476
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=87.83 E-value=7.2 Score=29.65 Aligned_cols=77 Identities=17% Similarity=0.248 Sum_probs=45.9
Q ss_pred CCeEEEEeCCchHhHHHHhcC--CCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHh---------h
Q psy4592 58 PKKVLIVGGGDGGVAREVLKH--PSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMS---------E 126 (197)
Q Consensus 58 ~~~vLdiG~G~G~~~~~l~~~--~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~---------~ 126 (197)
++.||..|++ |+++.++++. ....+|+.++.+++-.+...+.+.. ...++.++.+|+.+.-. .
T Consensus 44 ~k~vlITGas-ggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~-----~~~~~~~~~~Dl~d~~~v~~~~~~~~~ 117 (285)
T 2c07_A 44 NKVALVTGAG-RGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKS-----FGYESSGYAGDVSKKEEISEVINKILT 117 (285)
T ss_dssp SCEEEEESTT-SHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHT-----TTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEECCC-cHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHh-----cCCceeEEECCCCCHHHHHHHHHHHHH
Confidence 4578888775 4555555432 1236888888777665544444332 13467888888654211 1
Q ss_pred cCCceeEEEECCCC
Q psy4592 127 HQQEFDVIITDSSD 140 (197)
Q Consensus 127 ~~~~~D~I~~~~~~ 140 (197)
..+..|++|.+...
T Consensus 118 ~~~~id~li~~Ag~ 131 (285)
T 2c07_A 118 EHKNVDILVNNAGI 131 (285)
T ss_dssp HCSCCCEEEECCCC
T ss_pred hcCCCCEEEECCCC
Confidence 12578999998753
No 477
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=87.81 E-value=3.3 Score=31.55 Aligned_cols=78 Identities=12% Similarity=0.176 Sum_probs=46.8
Q ss_pred CCCeEEEEeCCchHhHHHHhcC--CCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHH------Hhh--
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKH--PSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRF------MSE-- 126 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~--~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~------~~~-- 126 (197)
.++.+|..|++.| ++.++++. ..+.+|+.++.+++..+.+.+.+.. ...++.++.+|+.+. ...
T Consensus 32 ~gk~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~Dv~~~~~~~~~~~~~~ 105 (275)
T 4imr_A 32 RGRTALVTGSSRG-IGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIA-----SGGTAQELAGDLSEAGAGTDLIERAE 105 (275)
T ss_dssp TTCEEEETTCSSH-HHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHH-----TTCCEEEEECCTTSTTHHHHHHHHHH
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHh-----cCCeEEEEEecCCCHHHHHHHHHHHH
Confidence 4567888887654 55444432 1126899999887665555444332 234688888886532 111
Q ss_pred cCCceeEEEECCCC
Q psy4592 127 HQQEFDVIITDSSD 140 (197)
Q Consensus 127 ~~~~~D~I~~~~~~ 140 (197)
..++.|++|.+.-.
T Consensus 106 ~~g~iD~lvnnAg~ 119 (275)
T 4imr_A 106 AIAPVDILVINASA 119 (275)
T ss_dssp HHSCCCEEEECCCC
T ss_pred HhCCCCEEEECCCC
Confidence 01578999998753
No 478
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=87.78 E-value=8.5 Score=30.12 Aligned_cols=71 Identities=18% Similarity=0.216 Sum_probs=40.9
Q ss_pred CCCeEEEEeCCchH--hHHHHhcCCCCccEE-EEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeE
Q psy4592 57 NPKKVLIVGGGDGG--VAREVLKHPSVESAY-LVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDV 133 (197)
Q Consensus 57 ~~~~vLdiG~G~G~--~~~~l~~~~~~~~v~-~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~ 133 (197)
++.+|..||||.=+ ....+....+..+++ .+|.+++..+.+.+.+. .+ ....|..+.+.. ...|+
T Consensus 7 ~~~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g-------~~---~~~~~~~~~l~~--~~~D~ 74 (346)
T 3cea_A 7 KPLRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELG-------VE---TTYTNYKDMIDT--ENIDA 74 (346)
T ss_dssp CCEEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTC-------CS---EEESCHHHHHTT--SCCSE
T ss_pred CcceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhC-------CC---cccCCHHHHhcC--CCCCE
Confidence 44689999998532 223333133445654 56999887655444322 11 223566665543 46899
Q ss_pred EEECCC
Q psy4592 134 IITDSS 139 (197)
Q Consensus 134 I~~~~~ 139 (197)
|+...+
T Consensus 75 V~i~tp 80 (346)
T 3cea_A 75 IFIVAP 80 (346)
T ss_dssp EEECSC
T ss_pred EEEeCC
Confidence 997664
No 479
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=87.77 E-value=7.7 Score=29.60 Aligned_cols=78 Identities=13% Similarity=0.141 Sum_probs=49.6
Q ss_pred CCCeEEEEeCCchHhHHHHhcC--CCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHh---------
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKH--PSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMS--------- 125 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~--~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~--------- 125 (197)
.++.+|..|++.| ++.++++. ..+.+|+.++.+++-++...+.+.. ...++.++.+|+.+.-.
T Consensus 27 ~~k~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~-----~~~~~~~~~~Dv~d~~~v~~~~~~~~ 100 (283)
T 3v8b_A 27 PSPVALITGAGSG-IGRATALALAADGVTVGALGRTRTEVEEVADEIVG-----AGGQAIALEADVSDELQMRNAVRDLV 100 (283)
T ss_dssp CCCEEEEESCSSH-HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTT-----TTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----cCCcEEEEEccCCCHHHHHHHHHHHH
Confidence 4568888887654 55444432 1126899999998877766665543 23578888888764311
Q ss_pred hcCCceeEEEECCCC
Q psy4592 126 EHQQEFDVIITDSSD 140 (197)
Q Consensus 126 ~~~~~~D~I~~~~~~ 140 (197)
...++.|++|.+.-.
T Consensus 101 ~~~g~iD~lVnnAg~ 115 (283)
T 3v8b_A 101 LKFGHLDIVVANAGI 115 (283)
T ss_dssp HHHSCCCEEEECCCC
T ss_pred HHhCCCCEEEECCCC
Confidence 112479999988753
No 480
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=87.65 E-value=3.5 Score=34.71 Aligned_cols=89 Identities=21% Similarity=0.199 Sum_probs=54.1
Q ss_pred CCCCeEEEEeCCchH-hHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEE
Q psy4592 56 PNPKKVLIVGGGDGG-VAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVI 134 (197)
Q Consensus 56 ~~~~~vLdiG~G~G~-~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I 134 (197)
..+++|+.+|+|.=+ .....++..+ .+|+++|.++...+.+++. . .++ .+..+.+ ..+|+|
T Consensus 272 l~GktV~IiG~G~IG~~~A~~lka~G-a~Viv~d~~~~~~~~A~~~-G----------a~~--~~l~e~l----~~aDvV 333 (494)
T 3ce6_A 272 IGGKKVLICGYGDVGKGCAEAMKGQG-ARVSVTEIDPINALQAMME-G----------FDV--VTVEEAI----GDADIV 333 (494)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTT-CEEEEECSCHHHHHHHHHT-T----------CEE--CCHHHHG----GGCSEE
T ss_pred CCcCEEEEEccCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHc-C----------CEE--ecHHHHH----hCCCEE
Confidence 456899999986422 2222334344 5899999999887766542 1 121 2433433 358999
Q ss_pred EECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 135 ITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 135 ~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
+.... ...+.. .+..+.||+||+++...
T Consensus 334 i~atg-----t~~~i~----~~~l~~mk~ggilvnvG 361 (494)
T 3ce6_A 334 VTATG-----NKDIIM----LEHIKAMKDHAILGNIG 361 (494)
T ss_dssp EECSS-----SSCSBC----HHHHHHSCTTCEEEECS
T ss_pred EECCC-----CHHHHH----HHHHHhcCCCcEEEEeC
Confidence 98652 222222 34566789999887644
No 481
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=87.64 E-value=9 Score=31.73 Aligned_cols=107 Identities=15% Similarity=0.133 Sum_probs=57.9
Q ss_pred CeEEEEeCCchHhH--HHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCC-CCC-------CCCCeEEEEcchHHHHhhcC
Q psy4592 59 KKVLIVGGGDGGVA--REVLKHPSVESAYLVEIDNRVIEVSKKYLPGMA-VGL-------SDPRLTVHVGDGFRFMSEHQ 128 (197)
Q Consensus 59 ~~vLdiG~G~G~~~--~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~-~~~-------~~~~~~~~~~d~~~~~~~~~ 128 (197)
.+|..||+|.=+.. ..+++.+...+|+++|.+++.++..++...... .++ ...++.+ ..|..+.+.
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~-t~~~~e~~~--- 81 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFF-STNIDDAIK--- 81 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEE-ESCHHHHHH---
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEE-ECCHHHHHh---
Confidence 58999999854433 334444323689999999988776544211000 000 0012332 345444333
Q ss_pred CceeEEEECCCCCCCCC-------ccc-ccHHHHHHHHhhcCCCcEEEEE
Q psy4592 129 QEFDVIITDSSDPVGPA-------ESL-FQASYFELMSRALRPGGIVCSQ 170 (197)
Q Consensus 129 ~~~D~I~~~~~~~~~~~-------~~l-~~~~~~~~~~~~LkpgG~l~~~ 170 (197)
..|+|+...+.+.... +.+ +..+..+.+.+.|++|..++..
T Consensus 82 -~aDvViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~ 130 (467)
T 2q3e_A 82 -EADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEK 130 (467)
T ss_dssp -HCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCSEEEEEEC
T ss_pred -cCCEEEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCCCCEEEEC
Confidence 3799999876544211 111 0145666777888887665543
No 482
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=87.63 E-value=7.7 Score=29.45 Aligned_cols=76 Identities=16% Similarity=0.246 Sum_probs=46.4
Q ss_pred CCCeEEEEeCCchHhHHHH----hcCCCCccEEEEEcC----------------HHHHHHHHhhcCCCCCCCCCCCeEEE
Q psy4592 57 NPKKVLIVGGGDGGVAREV----LKHPSVESAYLVEID----------------NRVIEVSKKYLPGMAVGLSDPRLTVH 116 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l----~~~~~~~~v~~ve~~----------------~~~~~~a~~~~~~~~~~~~~~~~~~~ 116 (197)
.++.+|..|++.| ++.++ ++.+ .+++.++.+ ++.++...+.+.. ...++.++
T Consensus 10 ~~k~~lVTGas~g-IG~aia~~la~~G--~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ 81 (286)
T 3uve_A 10 EGKVAFVTGAARG-QGRSHAVRLAQEG--ADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKG-----HNRRIVTA 81 (286)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHHTT--CEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHT-----TTCCEEEE
T ss_pred CCCEEEEeCCCch-HHHHHHHHHHHCC--CeEEEEeccccccccccccccccCCHHHHHHHHHHHhh-----cCCceEEE
Confidence 4568888888765 44443 3343 689999876 4444444443332 23578888
Q ss_pred EcchHHHH------h---hcCCceeEEEECCCC
Q psy4592 117 VGDGFRFM------S---EHQQEFDVIITDSSD 140 (197)
Q Consensus 117 ~~d~~~~~------~---~~~~~~D~I~~~~~~ 140 (197)
.+|+.+.- . ...++.|++|.+.-.
T Consensus 82 ~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~ 114 (286)
T 3uve_A 82 EVDVRDYDALKAAVDSGVEQLGRLDIIVANAGI 114 (286)
T ss_dssp ECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred EcCCCCHHHHHHHHHHHHHHhCCCCEEEECCcc
Confidence 88876421 1 112478999998753
No 483
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=87.62 E-value=7.2 Score=29.48 Aligned_cols=76 Identities=16% Similarity=0.265 Sum_probs=45.7
Q ss_pred CCCeEEEEeCCchHhHHHH----hcCCCCccEEEEEc-------------CHHHHHHHHhhcCCCCCCCCCCCeEEEEcc
Q psy4592 57 NPKKVLIVGGGDGGVAREV----LKHPSVESAYLVEI-------------DNRVIEVSKKYLPGMAVGLSDPRLTVHVGD 119 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l----~~~~~~~~v~~ve~-------------~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d 119 (197)
.++.+|..|++.| ++.++ ++.+ .+++.++. +++-++...+.... ...++.++.+|
T Consensus 10 ~~k~~lVTGas~G-IG~a~a~~la~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~D 81 (277)
T 3tsc_A 10 EGRVAFITGAARG-QGRAHAVRMAAEG--ADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEA-----ANRRIVAAVVD 81 (277)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHHTT--CEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHH-----TTCCEEEEECC
T ss_pred CCCEEEEECCccH-HHHHHHHHHHHcC--CEEEEEeccccccccccccccCHHHHHHHHHHHHh-----cCCeEEEEECC
Confidence 4568888887665 44443 3343 68989987 55555444333322 23468888888
Q ss_pred hHHHHh------h---cCCceeEEEECCCC
Q psy4592 120 GFRFMS------E---HQQEFDVIITDSSD 140 (197)
Q Consensus 120 ~~~~~~------~---~~~~~D~I~~~~~~ 140 (197)
+.+.-. . .-++.|++|.+.-.
T Consensus 82 ~~~~~~v~~~~~~~~~~~g~id~lvnnAg~ 111 (277)
T 3tsc_A 82 TRDFDRLRKVVDDGVAALGRLDIIVANAGV 111 (277)
T ss_dssp TTCHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 764311 1 12578999998753
No 484
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=87.59 E-value=1.3 Score=35.30 Aligned_cols=97 Identities=15% Similarity=0.070 Sum_probs=53.9
Q ss_pred CCC-CeEEEEeC--CchHhHHHHhcCCCCccEEEEEcCHHH----HHHHHhhcCCCCCCCCCCCeEEEE---cchHHHHh
Q psy4592 56 PNP-KKVLIVGG--GDGGVAREVLKHPSVESAYLVEIDNRV----IEVSKKYLPGMAVGLSDPRLTVHV---GDGFRFMS 125 (197)
Q Consensus 56 ~~~-~~vLdiG~--G~G~~~~~l~~~~~~~~v~~ve~~~~~----~~~a~~~~~~~~~~~~~~~~~~~~---~d~~~~~~ 125 (197)
+.+ .+||.+|+ |.|.++..+++..+ .+++++.-+++- .+.+++. .. ..-+.... .|..+.+.
T Consensus 165 ~~g~~~VlV~Ga~G~vG~~aiqlak~~G-a~vi~~~~~~~~~~~~~~~~~~l-Ga------~~vi~~~~~~~~~~~~~i~ 236 (364)
T 1gu7_A 165 TPGKDWFIQNGGTSAVGKYASQIGKLLN-FNSISVIRDRPNLDEVVASLKEL-GA------TQVITEDQNNSREFGPTIK 236 (364)
T ss_dssp CTTTCEEEESCTTSHHHHHHHHHHHHHT-CEEEEEECCCTTHHHHHHHHHHH-TC------SEEEEHHHHHCGGGHHHHH
T ss_pred CCCCcEEEECCCCcHHHHHHHHHHHHCC-CEEEEEecCccccHHHHHHHHhc-CC------eEEEecCccchHHHHHHHH
Confidence 456 89999996 35566667777655 566666544332 4455432 21 10111111 23222232
Q ss_pred h----cCCceeEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 126 E----HQQEFDVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 126 ~----~~~~~D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
. ....+|+|+-... . .... .+.+.|+++|.+++..
T Consensus 237 ~~t~~~~~g~Dvvid~~G-----~-----~~~~-~~~~~l~~~G~~v~~g 275 (364)
T 1gu7_A 237 EWIKQSGGEAKLALNCVG-----G-----KSST-GIARKLNNNGLMLTYG 275 (364)
T ss_dssp HHHHHHTCCEEEEEESSC-----H-----HHHH-HHHHTSCTTCEEEECC
T ss_pred HHhhccCCCceEEEECCC-----c-----hhHH-HHHHHhccCCEEEEec
Confidence 2 1357999985542 1 2233 6789999999998764
No 485
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=87.50 E-value=4.3 Score=30.75 Aligned_cols=109 Identities=11% Similarity=0.064 Sum_probs=57.3
Q ss_pred CCCeEEEEeCCchHhHHHHhcCC--CCccEEEEE-cCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHh--------
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKHP--SVESAYLVE-IDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMS-------- 125 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~~--~~~~v~~ve-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~-------- 125 (197)
.++.+|..|++.| ++.++++.. .+.+++.++ .+++..+...+.+.. ...++.++.+|+.+.-.
T Consensus 26 ~~k~~lVTGas~G-IG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~Dl~~~~~v~~~~~~~ 99 (267)
T 3u5t_A 26 TNKVAIVTGASRG-IGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEA-----AGGKALTAQADVSDPAAVRRLFATA 99 (267)
T ss_dssp -CCEEEEESCSSH-HHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHH-----TTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh-----cCCeEEEEEcCCCCHHHHHHHHHHH
Confidence 4568888887665 444444321 125676664 344444444333322 13467888888764211
Q ss_pred -hcCCceeEEEECCCCCCCCCcccccH---------------HHHHHHHhhcCCCcEEEEEc
Q psy4592 126 -EHQQEFDVIITDSSDPVGPAESLFQA---------------SYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 126 -~~~~~~D~I~~~~~~~~~~~~~l~~~---------------~~~~~~~~~LkpgG~l~~~~ 171 (197)
...++.|++|.+.-........-.+. .+.+.+.+.++++|.++..+
T Consensus 100 ~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~is 161 (267)
T 3u5t_A 100 EEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMS 161 (267)
T ss_dssp HHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEe
Confidence 11247999999875322111000011 13456667778888877765
No 486
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=87.43 E-value=8.1 Score=30.42 Aligned_cols=91 Identities=12% Similarity=0.141 Sum_probs=51.1
Q ss_pred CCCeEEEEeCCchHhHHHHh---cCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeE
Q psy4592 57 NPKKVLIVGGGDGGVAREVL---KHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDV 133 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~---~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~ 133 (197)
.+++|..||+|. ++..++ ...+ .+|+++|.++...+.+.+. .+.+. +..+.+. ..|+
T Consensus 154 ~g~~vgIIG~G~--iG~~iA~~l~~~G-~~V~~~d~~~~~~~~~~~~-----------g~~~~--~l~e~l~----~aDv 213 (330)
T 2gcg_A 154 TQSTVGIIGLGR--IGQAIARRLKPFG-VQRFLYTGRQPRPEEAAEF-----------QAEFV--STPELAA----QSDF 213 (330)
T ss_dssp TTCEEEEECCSH--HHHHHHHHHGGGT-CCEEEEESSSCCHHHHHTT-----------TCEEC--CHHHHHH----HCSE
T ss_pred CCCEEEEECcCH--HHHHHHHHHHHCC-CEEEEECCCCcchhHHHhc-----------CceeC--CHHHHHh----hCCE
Confidence 356899999874 333333 2233 5899999876544433221 12322 5555554 3799
Q ss_pred EEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEcCC
Q psy4592 134 IITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQAGT 173 (197)
Q Consensus 134 I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~~~ 173 (197)
|+...+...... .+.. ++..+.|++|.+++ ++..
T Consensus 214 Vi~~vp~~~~t~-~~i~----~~~~~~mk~gailI-n~sr 247 (330)
T 2gcg_A 214 IVVACSLTPATE-GLCN----KDFFQKMKETAVFI-NISR 247 (330)
T ss_dssp EEECCCCCTTTT-TCBS----HHHHHHSCTTCEEE-ECSC
T ss_pred EEEeCCCChHHH-HhhC----HHHHhcCCCCcEEE-ECCC
Confidence 999876532211 2222 34556788887765 5433
No 487
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=87.38 E-value=1.4 Score=33.82 Aligned_cols=79 Identities=18% Similarity=0.203 Sum_probs=48.4
Q ss_pred CCCeEEEEeCCchHhHHHHhcC--CCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHH---Hh------
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKH--PSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRF---MS------ 125 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~--~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~---~~------ 125 (197)
.++.||..|++. +++.++++. ..+.+|+.++.+++-.+.+.+.+... ...++.++.+|+.+. +.
T Consensus 11 ~~k~vlITGas~-GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~~Dl~~~~~~v~~~~~~~ 85 (311)
T 3o26_A 11 KRRCAVVTGGNK-GIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNS----NHENVVFHQLDVTDPIATMSSLADFI 85 (311)
T ss_dssp -CCEEEESSCSS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT----TCCSEEEEECCTTSCHHHHHHHHHHH
T ss_pred CCcEEEEecCCc-hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----CCCceEEEEccCCCcHHHHHHHHHHH
Confidence 346788888765 455554432 11268999999987666555544321 234788888887543 11
Q ss_pred -hcCCceeEEEECCCC
Q psy4592 126 -EHQQEFDVIITDSSD 140 (197)
Q Consensus 126 -~~~~~~D~I~~~~~~ 140 (197)
...+..|++|.+.-.
T Consensus 86 ~~~~g~iD~lv~nAg~ 101 (311)
T 3o26_A 86 KTHFGKLDILVNNAGV 101 (311)
T ss_dssp HHHHSSCCEEEECCCC
T ss_pred HHhCCCCCEEEECCcc
Confidence 112479999998753
No 488
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=87.33 E-value=4.7 Score=30.23 Aligned_cols=78 Identities=9% Similarity=0.127 Sum_probs=48.4
Q ss_pred CCCeEEEEeCCchHhHHHHhcCC--CCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHh---------
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKHP--SVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMS--------- 125 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~~--~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~--------- 125 (197)
.++.+|..|++.| ++.++++.. ...+++.++.+++-.+...+.+.. ...++.++.+|+.+.-.
T Consensus 11 ~~k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~Dv~d~~~v~~~~~~~~ 84 (256)
T 3gaf_A 11 NDAVAIVTGAAAG-IGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQ-----AGGKAIGLECNVTDEQHREAVIKAAL 84 (256)
T ss_dssp TTCEEEECSCSSH-HHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHH-----TTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----cCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 4567888887654 555444321 126899999998776655554432 23578888888764311
Q ss_pred hcCCceeEEEECCCC
Q psy4592 126 EHQQEFDVIITDSSD 140 (197)
Q Consensus 126 ~~~~~~D~I~~~~~~ 140 (197)
..-++.|+++.+.-.
T Consensus 85 ~~~g~id~lv~nAg~ 99 (256)
T 3gaf_A 85 DQFGKITVLVNNAGG 99 (256)
T ss_dssp HHHSCCCEEEECCCC
T ss_pred HHcCCCCEEEECCCC
Confidence 112478999998753
No 489
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=87.31 E-value=8.4 Score=29.57 Aligned_cols=106 Identities=13% Similarity=0.153 Sum_probs=62.1
Q ss_pred CCCeEEEEeCCchHhHHHHhcC--CCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHH------Hh---
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKH--PSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRF------MS--- 125 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~--~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~------~~--- 125 (197)
+++.+|.-|++.| ++.++++. ..+.+|..++.+++.++.+.+.+. .+...+.+|+.+. +.
T Consensus 28 ~gKvalVTGas~G-IG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g--------~~~~~~~~Dv~~~~~v~~~~~~~~ 98 (273)
T 4fgs_A 28 NAKIAVITGATSG-IGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIG--------GGAVGIQADSANLAELDRLYEKVK 98 (273)
T ss_dssp TTCEEEEESCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC--------TTCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCcCCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC--------CCeEEEEecCCCHHHHHHHHHHHH
Confidence 5678888887765 44444432 122799999999988776655442 2456677776532 11
Q ss_pred hcCCceeEEEECCCCCCC-CCcccccH--------------HHHHHHHhhcCCCcEEEEEc
Q psy4592 126 EHQQEFDVIITDSSDPVG-PAESLFQA--------------SYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 126 ~~~~~~D~I~~~~~~~~~-~~~~l~~~--------------~~~~~~~~~LkpgG~l~~~~ 171 (197)
..-++.|++|.|.-.... +-..+..+ ...+.+...|+.+|.++..+
T Consensus 99 ~~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInis 159 (273)
T 4fgs_A 99 AEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTG 159 (273)
T ss_dssp HHHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEC
T ss_pred HHcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEe
Confidence 123579999988643221 11111101 13455567888888876654
No 490
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=87.24 E-value=7.7 Score=29.03 Aligned_cols=106 Identities=13% Similarity=0.191 Sum_probs=61.8
Q ss_pred CCCeEEEEeCCchHhHHHHhcC--CCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHh---------
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKH--PSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMS--------- 125 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~--~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~--------- 125 (197)
.++++|..|++.| ++.++++. ....+++.++.+++-++...+.+. .++.++.+|+.+.-.
T Consensus 7 ~gk~~lVTGas~g-IG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--------~~~~~~~~Dv~~~~~v~~~~~~~~ 77 (255)
T 4eso_A 7 QGKKAIVIGGTHG-MGLATVRRLVEGGAEVLLTGRNESNIARIREEFG--------PRVHALRSDIADLNEIAVLGAAAG 77 (255)
T ss_dssp TTCEEEEETCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG--------GGEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC--------CcceEEEccCCCHHHHHHHHHHHH
Confidence 4568888887654 44444432 112689999999887766555432 367788888664211
Q ss_pred hcCCceeEEEECCCCCCCCCcccccH---------------HHHHHHHhhcCCCcEEEEEc
Q psy4592 126 EHQQEFDVIITDSSDPVGPAESLFQA---------------SYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 126 ~~~~~~D~I~~~~~~~~~~~~~l~~~---------------~~~~~~~~~LkpgG~l~~~~ 171 (197)
...++.|+++.+.-........-.+. .+.+.+...++++|.++..+
T Consensus 78 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~is 138 (255)
T 4eso_A 78 QTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTS 138 (255)
T ss_dssp HHHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEEC
Confidence 11247999998864322111000011 13455566777788877654
No 491
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=87.18 E-value=8.1 Score=29.26 Aligned_cols=81 Identities=12% Similarity=0.169 Sum_probs=48.7
Q ss_pred CCCeEEEEeCCchHhHHHHhcC--CCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHh------h--
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKH--PSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMS------E-- 126 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~--~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~------~-- 126 (197)
.+++||..|++.| ++.++++. ....+|+.++.+++-.+.+.+.+...+ ....++.++.+|+.+.-. .
T Consensus 10 ~~k~vlVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 86 (281)
T 3svt_A 10 QDRTYLVTGGGSG-IGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALG--ANGGAIRYEPTDITNEDETARAVDAVT 86 (281)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTC--CSSCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhC--CCCceEEEEeCCCCCHHHHHHHHHHHH
Confidence 4568888887654 44444332 112689999999877665555443311 012368888888764311 1
Q ss_pred -cCCceeEEEECCCC
Q psy4592 127 -HQQEFDVIITDSSD 140 (197)
Q Consensus 127 -~~~~~D~I~~~~~~ 140 (197)
..++.|+++.+.-.
T Consensus 87 ~~~g~id~lv~nAg~ 101 (281)
T 3svt_A 87 AWHGRLHGVVHCAGG 101 (281)
T ss_dssp HHHSCCCEEEECCCC
T ss_pred HHcCCCCEEEECCCc
Confidence 12478999998753
No 492
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=87.07 E-value=5.5 Score=30.07 Aligned_cols=78 Identities=17% Similarity=0.185 Sum_probs=46.3
Q ss_pred CCCeEEEEeCCchHhHHHHhcC--CCCccEEEEEc-CHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHH------h--
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKH--PSVESAYLVEI-DNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFM------S-- 125 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~--~~~~~v~~ve~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~------~-- 125 (197)
.+++||..|++.| ++.++++. ..+.+++.++. +++..+..++.+.. ...++.++.+|+.+.- .
T Consensus 28 ~~k~vlITGas~g-IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~~D~~~~~~v~~~~~~~ 101 (271)
T 4iin_A 28 TGKNVLITGASKG-IGAEIAKTLASMGLKVWINYRSNAEVADALKNELEE-----KGYKAAVIKFDAASESDFIEAIQTI 101 (271)
T ss_dssp SCCEEEETTCSSH-HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-----TTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHh-----cCCceEEEECCCCCHHHHHHHHHHH
Confidence 4568888887654 55444432 11268888887 55555554444332 2347888888875421 1
Q ss_pred -hcCCceeEEEECCCC
Q psy4592 126 -EHQQEFDVIITDSSD 140 (197)
Q Consensus 126 -~~~~~~D~I~~~~~~ 140 (197)
...++.|++|.+.-.
T Consensus 102 ~~~~g~id~li~nAg~ 117 (271)
T 4iin_A 102 VQSDGGLSYLVNNAGV 117 (271)
T ss_dssp HHHHSSCCEEEECCCC
T ss_pred HHhcCCCCEEEECCCc
Confidence 112479999998753
No 493
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=87.04 E-value=7.3 Score=30.66 Aligned_cols=106 Identities=22% Similarity=0.238 Sum_probs=52.7
Q ss_pred CCCeEEEEe-CCc-hHhHHH-HhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEc--chHHHHhhcCCce
Q psy4592 57 NPKKVLIVG-GGD-GGVARE-VLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVG--DGFRFMSEHQQEF 131 (197)
Q Consensus 57 ~~~~vLdiG-~G~-G~~~~~-l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~--d~~~~~~~~~~~~ 131 (197)
++.+|+.+| +|. |..... +.......+++.+|++++ ...+....... ...++..+.+ |..+.+ ...
T Consensus 7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~-~~~~~dL~~~~----~~~~v~~~~~t~d~~~al----~ga 77 (326)
T 1smk_A 7 PGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA-PGVTADISHMD----TGAVVRGFLGQQQLEAAL----TGM 77 (326)
T ss_dssp -CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH-HHHHHHHHTSC----SSCEEEEEESHHHHHHHH----TTC
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc-HhHHHHhhccc----ccceEEEEeCCCCHHHHc----CCC
Confidence 456899999 676 543333 333322257999999876 22222211110 1113433333 333323 347
Q ss_pred eEEEECCCCCCCCC---cccc------cHHHHHHHHhhcCCCcEEEEEcC
Q psy4592 132 DVIITDSSDPVGPA---ESLF------QASYFELMSRALRPGGIVCSQAG 172 (197)
Q Consensus 132 D~I~~~~~~~~~~~---~~l~------~~~~~~~~~~~LkpgG~l~~~~~ 172 (197)
|+|+.....+..+. ..+. ..++.+.+.+. .|++++++.++
T Consensus 78 DvVi~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~-~p~~~viv~SN 126 (326)
T 1smk_A 78 DLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKC-CPRAIVNLISN 126 (326)
T ss_dssp SEEEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHH-CTTSEEEECCS
T ss_pred CEEEEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEECC
Confidence 99998765443221 1111 12334444443 58898888653
No 494
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=87.00 E-value=6.7 Score=29.11 Aligned_cols=77 Identities=10% Similarity=0.179 Sum_probs=46.2
Q ss_pred CCCeEEEEeCCchHhHHHHhcCC--CCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHh--h------
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKHP--SVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMS--E------ 126 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~~--~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~--~------ 126 (197)
..++||..|++ |+++.++++.. ...+|+.++.+++-.+...+.+.. ...++.++.+|+.+.-. .
T Consensus 12 ~~k~vlItGas-ggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~-----~~~~~~~~~~D~~~~~~~~~~~~~~~ 85 (260)
T 3awd_A 12 DNRVAIVTGGA-QNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRM-----EGHDVSSVVMDVTNTESVQNAVRSVH 85 (260)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-----TTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----cCCceEEEEecCCCHHHHHHHHHHHH
Confidence 34688888865 45555544321 126899999987765544433322 12468888888764211 1
Q ss_pred -cCCceeEEEECCC
Q psy4592 127 -HQQEFDVIITDSS 139 (197)
Q Consensus 127 -~~~~~D~I~~~~~ 139 (197)
..++.|++|.+..
T Consensus 86 ~~~~~id~vi~~Ag 99 (260)
T 3awd_A 86 EQEGRVDILVACAG 99 (260)
T ss_dssp HHHSCCCEEEECCC
T ss_pred HHcCCCCEEEECCC
Confidence 1246899998864
No 495
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=86.99 E-value=7.8 Score=28.87 Aligned_cols=79 Identities=13% Similarity=0.177 Sum_probs=46.2
Q ss_pred CCCeEEEEeCCchHhHHHHhcC--CCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcch--HH------HHh-
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKH--PSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDG--FR------FMS- 125 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~--~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~--~~------~~~- 125 (197)
.++.+|..|++.| ++.++++. ....+|+.++.+++-++.+.+.+... ...++.++..|+ .+ ...
T Consensus 11 ~~k~vlVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~ 85 (252)
T 3f1l_A 11 NDRIILVTGASDG-IGREAAMTYARYGATVILLGRNEEKLRQVASHINEE----TGRQPQWFILDLLTCTSENCQQLAQR 85 (252)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH----HSCCCEEEECCTTTCCHHHHHHHHHH
T ss_pred CCCEEEEeCCCCh-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhh----cCCCceEEEEecccCCHHHHHHHHHH
Confidence 4568888887654 44444432 11268999999987766554443221 123567777776 21 111
Q ss_pred --hcCCceeEEEECCCC
Q psy4592 126 --EHQQEFDVIITDSSD 140 (197)
Q Consensus 126 --~~~~~~D~I~~~~~~ 140 (197)
...++.|++|.+.-.
T Consensus 86 ~~~~~g~id~lv~nAg~ 102 (252)
T 3f1l_A 86 IAVNYPRLDGVLHNAGL 102 (252)
T ss_dssp HHHHCSCCSEEEECCCC
T ss_pred HHHhCCCCCEEEECCcc
Confidence 123579999998753
No 496
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=86.97 E-value=8.8 Score=29.42 Aligned_cols=77 Identities=10% Similarity=0.119 Sum_probs=46.1
Q ss_pred CCCeEEEEeCCchHhHHHHhcCC--CCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHH------h---
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKHP--SVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFM------S--- 125 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~~--~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~------~--- 125 (197)
.++.||..|++. +++.++++.. ...+|+.++.+++-++...+.+.. ...++.++.+|+.+.- .
T Consensus 33 ~~k~vlVTGas~-gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~-----~~~~~~~~~~Dv~d~~~v~~~~~~~~ 106 (291)
T 3cxt_A 33 KGKIALVTGASY-GIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKA-----AGINAHGYVCDVTDEDGIQAMVAQIE 106 (291)
T ss_dssp TTCEEEEETCSS-HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHH-----TTCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCc-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----cCCeEEEEEecCCCHHHHHHHHHHHH
Confidence 456888888754 4555544321 126899999988766544443322 1235777888865321 1
Q ss_pred hcCCceeEEEECCC
Q psy4592 126 EHQQEFDVIITDSS 139 (197)
Q Consensus 126 ~~~~~~D~I~~~~~ 139 (197)
..-+..|++|.+.-
T Consensus 107 ~~~g~iD~lvnnAg 120 (291)
T 3cxt_A 107 SEVGIIDILVNNAG 120 (291)
T ss_dssp HHTCCCCEEEECCC
T ss_pred HHcCCCcEEEECCC
Confidence 11346899999874
No 497
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=86.97 E-value=2.1 Score=43.05 Aligned_cols=99 Identities=12% Similarity=0.094 Sum_probs=63.9
Q ss_pred CCCCeEEEEeC--CchHhHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCC-eEEEEcchHHHHhh-c-CCc
Q psy4592 56 PNPKKVLIVGG--GDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPR-LTVHVGDGFRFMSE-H-QQE 130 (197)
Q Consensus 56 ~~~~~vLdiG~--G~G~~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~-~-~~~ 130 (197)
+.+.+||..|+ |.|..+..+++..+ .+|++++-+++-.+.+++.+... .... +.....+..+.+.. . ...
T Consensus 1666 ~~Ge~VLI~gaaGgVG~aAiqlAk~~G-a~Viat~~s~~k~~~l~~~~~~l----ga~~v~~~~~~~~~~~i~~~t~g~G 1740 (2512)
T 2vz8_A 1666 QPGESVLIHSGSGGVGQAAIAIALSRG-CRVFTTVGSAEKRAYLQARFPQL----DETCFANSRDTSFEQHVLRHTAGKG 1740 (2512)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHCTTC----CSTTEEESSSSHHHHHHHHTTTSCC
T ss_pred CCCCEEEEEeCChHHHHHHHHHHHHcC-CEEEEEeCChhhhHHHHhhcCCC----CceEEecCCCHHHHHHHHHhcCCCC
Confidence 56689999974 55666677777655 68999999998888888754321 1111 11111233333322 2 246
Q ss_pred eeEEEECCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEE
Q psy4592 131 FDVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQ 170 (197)
Q Consensus 131 ~D~I~~~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~ 170 (197)
+|+|+-.. ..+.++...+.|+++|.++..
T Consensus 1741 vDvVld~~-----------g~~~l~~~l~~L~~~Gr~V~i 1769 (2512)
T 2vz8_A 1741 VDLVLNSL-----------AEEKLQASVRCLAQHGRFLEI 1769 (2512)
T ss_dssp EEEEEECC-----------CHHHHHHHHTTEEEEEEEEEC
T ss_pred ceEEEECC-----------CchHHHHHHHhcCCCcEEEEe
Confidence 99998533 145788999999999998865
No 498
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=86.88 E-value=3.3 Score=31.31 Aligned_cols=95 Identities=12% Similarity=-0.011 Sum_probs=55.4
Q ss_pred CeEEEEeCCchHhHHHHhcCC--CCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHHhhcCCceeEEEE
Q psy4592 59 KKVLIVGGGDGGVAREVLKHP--SVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVIIT 136 (197)
Q Consensus 59 ~~vLdiG~G~G~~~~~l~~~~--~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~I~~ 136 (197)
++||..|+ |.++..+.+.. ...+|+++.-++.-.+.... .+++++.+|..+ +. ...+|+|+.
T Consensus 6 ~~ilVtGa--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----------~~~~~~~~D~~d-~~--~~~~d~vi~ 69 (286)
T 3ius_A 6 GTLLSFGH--GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA-----------SGAEPLLWPGEE-PS--LDGVTHLLI 69 (286)
T ss_dssp CEEEEETC--CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH-----------TTEEEEESSSSC-CC--CTTCCEEEE
T ss_pred CcEEEECC--cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh-----------CCCeEEEecccc-cc--cCCCCEEEE
Confidence 58999994 77776665421 22689999988765443322 357888888766 22 457899998
Q ss_pred CCCCCCCCCcccccHHHHHHHHhhcCCCcEEEEEc
Q psy4592 137 DSSDPVGPAESLFQASYFELMSRALRPGGIVCSQA 171 (197)
Q Consensus 137 ~~~~~~~~~~~l~~~~~~~~~~~~LkpgG~l~~~~ 171 (197)
.........+ .+..+++.+.+.-..-..+++.+
T Consensus 70 ~a~~~~~~~~--~~~~l~~a~~~~~~~~~~~v~~S 102 (286)
T 3ius_A 70 STAPDSGGDP--VLAALGDQIAARAAQFRWVGYLS 102 (286)
T ss_dssp CCCCBTTBCH--HHHHHHHHHHHTGGGCSEEEEEE
T ss_pred CCCccccccH--HHHHHHHHHHhhcCCceEEEEee
Confidence 7653222211 12345554444312224555443
No 499
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=86.69 E-value=8.4 Score=28.92 Aligned_cols=77 Identities=14% Similarity=0.067 Sum_probs=49.1
Q ss_pred CCCeEEEEeCCc----hH-hHHHHhcCCCCccEEEEEcCHHHHHHHHhhcCCCCCCCCCCCeEEEEcchHHHH------h
Q psy4592 57 NPKKVLIVGGGD----GG-VAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFM------S 125 (197)
Q Consensus 57 ~~~~vLdiG~G~----G~-~~~~l~~~~~~~~v~~ve~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~------~ 125 (197)
+++.+|.-|+++ |. ++..+++.+ .+|..++.+++..+.+.+.+... ...++.++.+|+.+.- .
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~G--a~Vvi~~r~~~~~~~~~~~~~~~----~~~~~~~~~~Dv~~~~~v~~~~~ 78 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQLG--AKLVFTYRKERSRKELEKLLEQL----NQPEAHLYQIDVQSDEEVINGFE 78 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHTT--CEEEEEESSGGGHHHHHHHHGGG----TCSSCEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCC--CEEEEEECCHHHHHHHHHHHHhc----CCCcEEEEEccCCCHHHHHHHHH
Confidence 567899999643 32 334444453 78999999987776666554432 2346788888865321 1
Q ss_pred ---hcCCceeEEEECCC
Q psy4592 126 ---EHQQEFDVIITDSS 139 (197)
Q Consensus 126 ---~~~~~~D~I~~~~~ 139 (197)
..-++.|+++.|.-
T Consensus 79 ~~~~~~G~iD~lvnnAg 95 (256)
T 4fs3_A 79 QIGKDVGNIDGVYHSIA 95 (256)
T ss_dssp HHHHHHCCCSEEEECCC
T ss_pred HHHHHhCCCCEEEeccc
Confidence 12357999998864
No 500
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=86.59 E-value=8.7 Score=29.50 Aligned_cols=77 Identities=12% Similarity=0.186 Sum_probs=45.6
Q ss_pred CCCeEEEEeCCchHhHHHHhcC--CCCccEEEEEcC------------HHHHHHHHhhcCCCCCCCCCCCeEEEEcchHH
Q psy4592 57 NPKKVLIVGGGDGGVAREVLKH--PSVESAYLVEID------------NRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFR 122 (197)
Q Consensus 57 ~~~~vLdiG~G~G~~~~~l~~~--~~~~~v~~ve~~------------~~~~~~a~~~~~~~~~~~~~~~~~~~~~d~~~ 122 (197)
.++.+|..|++.| ++.++++. ..+.+++.++.+ ++-++...+.+.. ...++.++.+|+.+
T Consensus 27 ~gk~~lVTGas~G-IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~Dv~~ 100 (299)
T 3t7c_A 27 EGKVAFITGAARG-QGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEA-----LGRRIIASQVDVRD 100 (299)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHH-----TTCCEEEEECCTTC
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHh-----cCCceEEEECCCCC
Confidence 4568888888765 44444331 112689899876 4444443333322 23478888888764
Q ss_pred HHh------h---cCCceeEEEECCC
Q psy4592 123 FMS------E---HQQEFDVIITDSS 139 (197)
Q Consensus 123 ~~~------~---~~~~~D~I~~~~~ 139 (197)
.-. . .-++.|++|.+.-
T Consensus 101 ~~~v~~~~~~~~~~~g~iD~lv~nAg 126 (299)
T 3t7c_A 101 FDAMQAAVDDGVTQLGRLDIVLANAA 126 (299)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHHHHHHhCCCCEEEECCC
Confidence 211 1 1247899998865
Done!