RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy4592
(197 letters)
>d2b2ca1 c.66.1.17 (A:3-314) Spermidine synthase {Caenorhabditis
elegans [TaxId: 6239]}
Length = 312
Score = 191 bits (486), Expect = 2e-61
Identities = 103/200 (51%), Positives = 136/200 (68%), Gaps = 8/200 (4%)
Query: 2 GVSLSLQVEEPFYPSSSN--------RKEFGTALILDGIIQCTEFDEFSYSEMIAFLPLC 53
G + SLQV++ + S +G L+LDGI+Q TE DEFSY EM+A LP+
Sbjct: 43 GQAFSLQVKKVLFHEKSKYQDVLVFESTTYGNVLVLDGIVQATERDEFSYQEMLAHLPMF 102
Query: 54 SHPNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRL 113
+HP+PK+VLI+GGGDGG+ REVLKH SVE + EID VI+V+KK+LPGM+ G S P+L
Sbjct: 103 AHPDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKL 162
Query: 114 TVHVGDGFRFMSEHQQEFDVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQAGT 173
+ GDGF F+ H+ EFDVIITDSSDPVGPAESLF SY+EL+ AL+ GI+ SQ +
Sbjct: 163 DLFCGDGFEFLKNHKNEFDVIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQGES 222
Query: 174 LWYSLDCVGNTLQHCASVFP 193
+W L + + + +FP
Sbjct: 223 VWLHLPLIAHLVAFNRKIFP 242
>d2o07a1 c.66.1.17 (A:16-300) Spermidine synthase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 285
Score = 178 bits (451), Expect = 2e-56
Identities = 120/200 (60%), Positives = 145/200 (72%), Gaps = 8/200 (4%)
Query: 2 GVSLSLQVEEPFYPSSS--------NRKEFGTALILDGIIQCTEFDEFSYSEMIAFLPLC 53
G +LSLQVE+ + S K +G L+LDG+IQCTE DEFSY EMIA LPLC
Sbjct: 15 GQALSLQVEQLLHHRRSRYQDILVFRSKTYGNVLVLDGVIQCTERDEFSYQEMIANLPLC 74
Query: 54 SHPNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRL 113
SHPNP+KVLI+GGGDGGV REV+KHPSVES EID VI+VSKK+LPGMA+G S +L
Sbjct: 75 SHPNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKL 134
Query: 114 TVHVGDGFRFMSEHQQEFDVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQAGT 173
T+HVGDGF FM ++Q FDVIITDSSDP+GPAESLF+ SY++LM AL+ G++C Q
Sbjct: 135 TLHVGDGFEFMKQNQDAFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGEC 194
Query: 174 LWYSLDCVGNTLQHCASVFP 193
W LD + Q C S+FP
Sbjct: 195 QWLHLDLIKEMRQFCQSLFP 214
>d1xj5a_ c.66.1.17 (A:) Spermidine synthase {Thale cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 290
Score = 168 bits (426), Expect = 1e-52
Identities = 92/201 (45%), Positives = 134/201 (66%), Gaps = 9/201 (4%)
Query: 2 GVSLSLQVEEPFYPSSS--------NRKEFGTALILDGIIQCTEFDEFSYSEMIAFLPLC 53
G + SL+VE+ + S +G L+LDG+IQ TE DE +Y EMI LPLC
Sbjct: 17 GEAHSLKVEKVLFQGKSDYQDVIVFQSATYGKVLVLDGVIQLTERDECAYQEMITHLPLC 76
Query: 54 SHPNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRL 113
S PNPKKVL++GGGDGGV REV +H S+E + EID V++VSK++ P +A+G DPR+
Sbjct: 77 SIPNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRV 136
Query: 114 TVHVGDGFRFMSEHQQE-FDVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQAG 172
+ +GDG F+ + +D +I DSSDP+GPA+ LF+ +F+ ++RALRPGG+VC+QA
Sbjct: 137 NLVIGDGVAFLKNAAEGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQAE 196
Query: 173 TLWYSLDCVGNTLQHCASVFP 193
+LW +D + + + +C +F
Sbjct: 197 SLWLHMDIIEDIVSNCREIFK 217
>d1iy9a_ c.66.1.17 (A:) Spermidine synthase {Bacillus subtilis
[TaxId: 1423]}
Length = 274
Score = 163 bits (413), Expect = 7e-51
Identities = 84/200 (42%), Positives = 130/200 (65%), Gaps = 8/200 (4%)
Query: 2 GVSLSLQVEEPFYPSSS--------NRKEFGTALILDGIIQCTEFDEFSYSEMIAFLPLC 53
++++V + + + +EFG L LDG++ +E DEF Y EM+A +PL
Sbjct: 12 NFGITMKVNKTLHTEQTEFQHLEMVETEEFGNMLFLDGMVMTSEKDEFVYHEMVAHVPLF 71
Query: 54 SHPNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRL 113
+HPNP+ VL+VGGGDGGV RE+LKHPSV+ A LV+ID +VIE SKK+LP +A L DPR+
Sbjct: 72 THPNPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRV 131
Query: 114 TVHVGDGFRFMSEHQQEFDVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQAGT 173
V V DGF +++ + ++DVI+ DS++PVGPA +LF ++ +++AL+ GI +Q
Sbjct: 132 DVQVDDGFMHIAKSENQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDN 191
Query: 174 LWYSLDCVGNTLQHCASVFP 193
W++ + + N + +FP
Sbjct: 192 PWFTPELITNVQRDVKEIFP 211
>d1inla_ c.66.1.17 (A:) Spermidine synthase {Thermotoga maritima
[TaxId: 2336]}
Length = 295
Score = 160 bits (406), Expect = 1e-49
Identities = 78/201 (38%), Positives = 109/201 (54%), Gaps = 9/201 (4%)
Query: 2 GVSLSLQVEEPFYPSSS--------NRKEFGTALILDGIIQCTEFDEFSYSEMIAFLPLC 53
V L +++ Y S + G LDGI TE DEF Y EM+A +P+
Sbjct: 26 NVGLFMKMNRVIYSGQSDIQRIDIFENPDLGVVFALDGITMTTEKDEFMYHEMLAHVPMF 85
Query: 54 SHPNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRL 113
HPNPKKVLI+GGGDGG REVLKH SVE A L E+D VIE ++KYL + G DPR
Sbjct: 86 LHPNPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRA 145
Query: 114 TVHVGDGFRFMSEHQQEFDVIITDSSDP-VGPAESLFQASYFELMSRALRPGGIVCSQAG 172
+ + +G ++ + + EFDVII DS+DP G LF +++ AL+ G+ ++
Sbjct: 146 EIVIANGAEYVRKFKNEFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETE 205
Query: 173 TLWYSLDCVGNTLQHCASVFP 193
+Y + + + VFP
Sbjct: 206 DPFYDIGWFKLAYRRISKVFP 226
>d1uira_ c.66.1.17 (A:) Spermidine synthase {Thermus thermophilus
[TaxId: 274]}
Length = 312
Score = 157 bits (397), Expect = 4e-48
Identities = 69/199 (34%), Positives = 107/199 (53%), Gaps = 12/199 (6%)
Query: 2 GVSLSLQVEEPFYPSSSN--------RKEFGTALILDGIIQCTEFDEFSYSEMIAFLPLC 53
+L ++E + K FG LILD +Q TE DE+ Y E + +
Sbjct: 14 YETLVRRMERVIASGKTPFQDYFLFESKGFGKVLILDKDVQSTERDEYIYHETLVHPAML 73
Query: 54 SHPNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGL-SDPR 112
+HP PK+VLIVGGG+G REVLKHP+VE A +V+ID ++EV+K+++P G DPR
Sbjct: 74 THPEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPR 133
Query: 113 LTVHVGDGFRFMSEHQQEFDVIITDSSDPVG---PAESLFQASYFELMSRALRPGGIVCS 169
+ + D ++ ++ +DV+I D +DPVG PA L+ ++ L+ L PGG++
Sbjct: 134 AVLVIDDARAYLERTEERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGM 193
Query: 170 QAGTLWYSLDCVGNTLQHC 188
Q G + + V +
Sbjct: 194 QTGMILLTHHRVHPVVHRT 212
>d1mjfa_ c.66.1.17 (A:) Putative spermidine synthetase PF0127 (SpeE)
{Archaeon Pyrococcus furiosus [TaxId: 2261]}
Length = 276
Score = 152 bits (385), Expect = 1e-46
Identities = 72/210 (34%), Positives = 111/210 (52%), Gaps = 16/210 (7%)
Query: 2 GVSLSLQVEEPFYPSSSN--------RKEFGTALILDGIIQCTEFDEFSYSEMIAFLPLC 53
G ++ ++++ Y S + FG L LDG +Q E SY E + +
Sbjct: 9 GYGVAFKIKKKIYEKLSKYQKIEVYETEGFGRLLALDGTVQLVTLGERSYHEPLVHPAML 68
Query: 54 SHPNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLP------GMAVG 107
+HP PK+VL++GGGDGG REVL+H V+ +VEID VI VSK + +
Sbjct: 69 AHPKPKRVLVIGGGDGGTVREVLQHD-VDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLN 127
Query: 108 LSDPRLTVHVGDGFRFMSEHQQEFDVIITDSSDPVGPAESLFQASYFELMSRALRPGGIV 167
+ + +GDGF F+ ++ FDVII DS+DPVGPA+ LF ++ + AL GI
Sbjct: 128 GKHEKAKLTIGDGFEFIKNNRG-FDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIY 186
Query: 168 CSQAGTLWYSLDCVGNTLQHCASVFPRLHC 197
+QAG+++ D + + + VF R++
Sbjct: 187 VTQAGSVYLFTDELISAYKEMKKVFDRVYY 216
>d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 264
Score = 40.0 bits (93), Expect = 6e-05
Identities = 23/130 (17%), Positives = 39/130 (30%), Gaps = 13/130 (10%)
Query: 42 SYSEMIAFLPLCSHPNP-KKVLIVGGGDGGVAREVLKHPSVE-SAYLVEIDNRVIEVSKK 99
Y + A + P +VL G G G + +L+ E E +++
Sbjct: 80 IYPKDAAQIVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARR 139
Query: 100 YLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVIITDSSDPVGPAESLFQASYFELMSR 159
+ G D + V D D + D P + +SR
Sbjct: 140 NVSGCYGQPPD-NWRLVVSDLA-DSELPDGSVDRAVLDMLAPW---------EVLDAVSR 188
Query: 160 ALRPGGIVCS 169
L GG++
Sbjct: 189 LLVAGGVLMV 198
>d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase
{Human (Homo sapiens) [TaxId: 9606]}
Length = 229
Score = 38.9 bits (89), Expect = 1e-04
Identities = 16/116 (13%), Positives = 38/116 (32%), Gaps = 4/116 (3%)
Query: 53 CSHPNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPR 112
+ +VL VG G A +V + P ++ +++E ++ V + + + P
Sbjct: 49 AASSKGGRVLEVGFGMAIAASKVQEAP-IDEHWIIECNDGVFQRLRDWAPRQTH---KVI 104
Query: 113 LTVHVGDGFRFMSEHQQEFDVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVC 168
+ + ++ + R L+PGG++
Sbjct: 105 PLKGLWEDVAPTLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLT 160
>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 292
Score = 38.0 bits (87), Expect = 3e-04
Identities = 20/128 (15%), Positives = 44/128 (34%), Gaps = 12/128 (9%)
Query: 49 FLPLCSHPNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGL 108
L L +VL V G G + +++ S V+ +++++ + K
Sbjct: 48 LLGLLRQHGCHRVLDVACGTGVDSIMLVEE--GFSVTSVDASDKMLKYALKERWNRRKEP 105
Query: 109 SDPRLTVHVGDGFRF---MSEHQQEFDVIITDSS-----DPVGPAESLFQASYFELMSRA 160
+ + + + + VI +S D G A + ++
Sbjct: 106 AFDKWVIEEANWLTLDKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLA--LKNIASM 163
Query: 161 LRPGGIVC 168
+RPGG++
Sbjct: 164 VRPGGLLV 171
>d1i4wa_ c.66.1.24 (A:) Transcription factor sc-mtTFB {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 322
Score = 37.0 bits (85), Expect = 9e-04
Identities = 12/96 (12%), Positives = 24/96 (25%), Gaps = 18/96 (18%)
Query: 28 ILDGIIQCTEFDEFSYSEMIAFLPLCSHPNPKKVLIVGGGDGGVAREVLKHPSVESAYLV 87
+ + I + HP KVL + G G + L+
Sbjct: 25 VYNKIFDKLDLT-----------KTYKHPEELKVLDLYPGVGIQSAIFYNKYCPRQYSLL 73
Query: 88 EIDNRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRF 123
E + + + L + D + +
Sbjct: 74 EKRSSLYKFLNAKFE-------GSPLQILKRDPYDW 102
>d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone
methyltransferase Dot1l {Human (Homo sapiens) [TaxId:
9606]}
Length = 328
Score = 36.0 bits (82), Expect = 0.002
Identities = 22/139 (15%), Positives = 43/139 (30%), Gaps = 14/139 (10%)
Query: 37 EFDEFSYSEMIAFLPLCSHPNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEV 96
E ++MI + + + + +G G G V +V + + Y VE + +
Sbjct: 134 ETSFDLVAQMIDEIKM---TDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKY 190
Query: 97 SKKYLPGM-----AVGLSDPRLTVHVGDGFRF-MSEHQQEFDVIITDSSDPVGPAESLFQ 150
++ G T+ GD E VI ++ A
Sbjct: 191 AETMDREFRKWMKWYGKKHAEYTLERGDFLSEEWRERIANTSVIFVNNF-----AFGPEV 245
Query: 151 ASYFELMSRALRPGGIVCS 169
+ ++ GG + S
Sbjct: 246 DHQLKERFANMKEGGRIVS 264
>d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 324
Score = 35.5 bits (81), Expect = 0.003
Identities = 19/120 (15%), Positives = 35/120 (29%), Gaps = 18/120 (15%)
Query: 59 KKVLIVGGGDGGVAREVLKHPSVE-SAYLVEIDNRVIEVSKKYLPGM-------AVGLSD 110
VL G G GG++ + K + E+ +++KK V
Sbjct: 100 DTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWP 159
Query: 111 PRLTVHVGDGFRFMSEHQQE-FDVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCS 169
+ D + + FD + D +P + L+ GG+
Sbjct: 160 DNVDFIHKDISGATEDIKSLTFDAVALDMLNPH---------VTLPVFYPHLKHGGVCAV 210
>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional
dehydrogenase/ferrochelatase Met8p, N-terminal domain
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 150
Score = 34.7 bits (79), Expect = 0.003
Identities = 14/85 (16%), Positives = 24/85 (28%), Gaps = 9/85 (10%)
Query: 46 MIAFLPLCSHPNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMA 105
M+ L L K++L++GGG+ V L L+ ++ VS +
Sbjct: 1 MVKSLQLAHQLKDKRILLIGGGE--VGLTRLYK-------LMPTGCKLTLVSPDLHKSII 51
Query: 106 VGLSDPRLTVHVGDGFRFMSEHQQE 130
D
Sbjct: 52 PKFGKFIQNKDQPDYREDAKRFINP 76
>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan
pit viper (Calloselasma rhodostoma) [TaxId: 8717]}
Length = 370
Score = 34.7 bits (78), Expect = 0.006
Identities = 25/134 (18%), Positives = 47/134 (35%), Gaps = 16/134 (11%)
Query: 38 FDEFSYSEM--IAFLPLCSHPNPKKVLIVGGGDGGVAREVLKHPSVESAYLVE---IDNR 92
F E Y E IA L + NPK V+IVG G G++ +AY++
Sbjct: 8 FQENDYEEFLEIARNGLKATSNPKHVVIVGAGMAGLS----------AAYVLAGAGHQVT 57
Query: 93 VIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVIITDSSDPVGPAESLFQAS 152
V+E + + G + + G + E + I + +
Sbjct: 58 VLE-ASERPGGRVRTYRNEEAGWYANLGPMRLPEKHRIVREYIRKFDLRLNEFSQENDNA 116
Query: 153 YFELMSRALRPGGI 166
++ + + + G +
Sbjct: 117 WYFIKNIRKKVGEV 130
>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB
{Salmonella typhimurium [TaxId: 90371]}
Length = 198
Score = 33.0 bits (74), Expect = 0.015
Identities = 16/121 (13%), Positives = 35/121 (28%), Gaps = 10/121 (8%)
Query: 48 AFLPLCSHPNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVG 107
L P + L +G G+G + + + + + + ++ +
Sbjct: 21 DVLAAAKVVAPGRTLDLGCGNGRNSLYLAANGY--DVTAWDKNPASMANLERIKAAEGLD 78
Query: 108 LSDPRLTVHVGDGFRFMSEHQQEFDVIITDSSDPVGPAESLFQASYFELMSRALRPGGIV 167
L E+D I++ A+++ M R +PGG
Sbjct: 79 NLQTDLVDL------NTLTFDGEYDFILSTVVMMFLEAQTIPG--LIANMQRCTKPGGYN 130
Query: 168 C 168
Sbjct: 131 L 131
>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase
{Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}
Length = 252
Score = 32.6 bits (73), Expect = 0.018
Identities = 25/113 (22%), Positives = 41/113 (36%), Gaps = 4/113 (3%)
Query: 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTV 115
VL +G G GG + + + Y V+I I ++ M ++
Sbjct: 23 KRGDSVLDLGCGKGGDLLKYERAG-IGEYYGVDIAEVSINDARVRARNMKR---RFKVFF 78
Query: 116 HVGDGFRFMSEHQQEFDVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVC 168
D + + +EFDVI + S + S ++R LRPGG
Sbjct: 79 RAQDSYGRHMDLGKEFDVISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFI 131
>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas
syringae [TaxId: 317]}
Length = 201
Score = 30.5 bits (67), Expect = 0.083
Identities = 9/126 (7%), Positives = 24/126 (19%), Gaps = 8/126 (6%)
Query: 46 MIAFLPLCSHPNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMA 105
+ + + +VL+ G + E+ +E
Sbjct: 9 LQQYWSSLNVVPGARVLVPLCGKSQDMSWLSGQGYH--VVGAELSEAAVERYFTERGEQP 66
Query: 106 VGLSDPRLTVHVGDGFRFMSEHQQEFDVIITDSSDPVGPAESL------FQASYFELMSR 159
S V+ G ++ + Y + +
Sbjct: 67 HITSQGDFKVYAAPGIEIWCGDFFALTARDIGHCAAFYDRAAMIALPADMRERYVQHLEA 126
Query: 160 ALRPGG 165
+
Sbjct: 127 LMPQAC 132
>d1jqea_ c.66.1.19 (A:) Histamine methyltransferase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 280
Score = 30.7 bits (68), Expect = 0.088
Identities = 17/142 (11%), Positives = 41/142 (28%), Gaps = 15/142 (10%)
Query: 38 FDEFSYSEMIAFLPLCSHPNPK-KVLIVGGGDGGVAREVLK------HPSVESAYLVEID 90
EF ++ + + K+L +GGG G + ++L + +VE
Sbjct: 20 MQEFMDKKLPGIIGRIGDTKSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPS 79
Query: 91 NRVIEVSKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQ----QEFDVIITDSSDPVGPAE 146
I K+ + ++ + + Q++D I + +
Sbjct: 80 AEQIAKYKELVAKISNLENVKFAWHKETSSEYQSRMLEKKELQKWDFIH--MIQMLYYVK 137
Query: 147 SLFQASYFELMSRALRPGGIVC 168
+ + L +
Sbjct: 138 DIPAT--LKFFHSLLGTNAKML 157
>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli
[TaxId: 562]}
Length = 245
Score = 29.9 bits (66), Expect = 0.15
Identities = 16/130 (12%), Positives = 40/130 (30%), Gaps = 13/130 (10%)
Query: 38 FDEFSYSEMIAFLPLCSHPNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVS 97
F E Y+ + L + ++L +G G G + + + + +
Sbjct: 17 FTEEKYATLGRVLRM---KPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAK 73
Query: 98 KKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVIITDSSDPVGPAESLFQASYFELM 157
++ +++ ++ G EL+
Sbjct: 74 RRAEELGVSERVHFIHND-----AAGYVANEKCDVAACVGATWIAGGFA-----GAEELL 123
Query: 158 SRALRPGGIV 167
+++L+PGGI+
Sbjct: 124 AQSLKPGGIM 133
>d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus
cereus [TaxId: 1396]}
Length = 281
Score = 29.8 bits (66), Expect = 0.16
Identities = 17/131 (12%), Positives = 44/131 (33%), Gaps = 12/131 (9%)
Query: 39 DEFSYSEMIAFLP--LCSHPNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEV 96
D + + ++FL + P ++ G G G + ++ E + ID+ +
Sbjct: 7 DLYYNDDYVSFLVNTVWKITKPVHIVDYGCGYGYLGLVLMPLLP-EGSKYTGIDSGETLL 65
Query: 97 SKKYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVIITDSSDPVGPAESLFQASYFEL 156
++ P + + + + + I + E++ Q
Sbjct: 66 AEARELFR----LLPYDSEFLEGDATEIELNDKYDIAICHAFLLHMTTPETMLQK----- 116
Query: 157 MSRALRPGGIV 167
M +++ GG +
Sbjct: 117 MIHSVKKGGKI 127
>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide
dehydrogenase, FCSD, flavin-binding subunit {Purple
phototrophic bacterium (Chromatium vinosum) [TaxId:
1049]}
Length = 186
Score = 29.4 bits (64), Expect = 0.22
Identities = 11/37 (29%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Query: 58 PKKVLIVGGGDGGV--AREVLKHPSVESAYLVEIDNR 92
+KV++VGGG GG A+ + L+E +
Sbjct: 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNTD 38
>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine
dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId:
9823]}
Length = 196
Score = 29.3 bits (64), Expect = 0.24
Identities = 3/16 (18%), Positives = 8/16 (50%)
Query: 57 NPKKVLIVGGGDGGVA 72
K+ ++G G ++
Sbjct: 3 YSAKIALLGAGPASIS 18
>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase
SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}
Length = 335
Score = 29.6 bits (65), Expect = 0.25
Identities = 10/40 (25%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Query: 56 PNPKKVLIVGGGDGGV--AREVLKHPSVESAYLVEIDNRV 93
P +K+ I+G G G+ A+ +L + + L E
Sbjct: 2 PTIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSP 41
>d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia
coli [TaxId: 562]}
Length = 268
Score = 29.5 bits (65), Expect = 0.25
Identities = 21/123 (17%), Positives = 34/123 (27%), Gaps = 21/123 (17%)
Query: 46 MIAFLPLCSHPNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMA 105
++A L VL +G G+G + +D K + A
Sbjct: 73 IVAQLRERLDDKATAVLDIGCGEGYYTHAFADA--LPEITTFGLDVS-----KVAIKAAA 125
Query: 106 VGLSDPRLTVHVGDGFRFMSEHQQEFDVIITDSSDPVGPAESLFQASYFELMSRALRPGG 165
V F D II ++ E ++R ++PGG
Sbjct: 126 KRYPQVTFCVASSHRLPFSDTS---MDAII-----------RIYAPCKAEELARVVKPGG 171
Query: 166 IVC 168
V
Sbjct: 172 WVI 174
>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein
HI0607 {Haemophilus influenzae [TaxId: 727]}
Length = 167
Score = 29.1 bits (64), Expect = 0.25
Identities = 9/45 (20%), Positives = 19/45 (42%), Gaps = 2/45 (4%)
Query: 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKY 100
KV++ G G G+A+ V+ ++I R ++ +
Sbjct: 15 NKNAKVIVHGSG--GMAKAVVAAFKNSGFEKLKIYARNVKTGQYL 57
>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus
halodurans [TaxId: 86665]}
Length = 231
Score = 28.8 bits (63), Expect = 0.31
Identities = 20/125 (16%), Positives = 43/125 (34%), Gaps = 11/125 (8%)
Query: 44 SEMIAFLPLCSHPNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPG 103
S++ + + + ++VL V G G VA V+ ++ +++V++ ++ G
Sbjct: 2 SDLAKLMQIAALKGNEEVLDVATGGGHVANAFAPF--VKKVVAFDLTEDILKVARAFIEG 59
Query: 104 MAVGLSDPRLTVHVGDGFRFMSEHQQEFDVIITDSSDPVGPAESLFQASYFELMSRALRP 163
+ F H + +P AS+ R L+
Sbjct: 60 NGHQQVEYVQGDAEQMPFTDERFHIVTCRIAAHHFPNP---------ASFVSEAYRVLKK 110
Query: 164 GGIVC 168
GG +
Sbjct: 111 GGQLL 115
>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 316
Score = 29.0 bits (64), Expect = 0.35
Identities = 23/120 (19%), Positives = 44/120 (36%), Gaps = 7/120 (5%)
Query: 59 KKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVG 118
K VL VG G G + K + +E +S + + D +T+ G
Sbjct: 35 KVVLDVGSGTGILCMFAAKAGA-RKVIGIECS----SISDYAVKIVKANKLDHVVTIIKG 89
Query: 119 DGFRFMSEHQQEFDVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQAGTLWYSL 178
+ ++ D+II++ ES+ + + L P G++ TL+ +
Sbjct: 90 K-VEEVELPVEKVDIIISEWMGYCLFYESMLN-TVLHARDKWLAPDGLIFPDRATLYVTA 147
>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis
glycosyltransferase MurG {Escherichia coli [TaxId: 562]}
Length = 351
Score = 28.9 bits (63), Expect = 0.36
Identities = 11/51 (21%), Positives = 20/51 (39%), Gaps = 12/51 (23%)
Query: 59 KKVLIVGGGDGG-------VAREVLKHPSVESAYLVEIDNRVIEVSKKYLP 102
K+++++ GG GG VA L + +L +E +P
Sbjct: 1 KRLMVMAGGTGGHVFPGLAVAHH-LMAQGWQVRWL--GTADRME--ADLVP 46
>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305
{Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Length = 251
Score = 28.9 bits (63), Expect = 0.40
Identities = 19/113 (16%), Positives = 40/113 (35%), Gaps = 10/113 (8%)
Query: 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTV 115
++VL + G G E+ + + +++ ++ L + L +
Sbjct: 40 REVRRVLDLACGTGIPTLELAERG---------YEVVGLDLHEEMLRVARRKAKERNLKI 90
Query: 116 HVGDGFRFMSEHQQEFDVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVC 168
G + EFD + S + E + F ++ AL+PGG+
Sbjct: 91 EFLQGDVLEIAFKNEFDAVTMFFSTIMYFDEEDLRK-LFSKVAEALKPGGVFI 142
>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia
carotovora [TaxId: 554]}
Length = 225
Score = 28.7 bits (63), Expect = 0.40
Identities = 24/159 (15%), Positives = 42/159 (26%), Gaps = 20/159 (12%)
Query: 41 FSYSEMIAFL--PLCSHPNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSK 98
F + M F+ P +L +G G + +H VE I ++
Sbjct: 2 FDFDVMHPFMVRAFTPFFRPGNLLELGSFKGDFTSRLQEH--FNDITCVEASEEAISHAQ 59
Query: 99 KYLPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVIITDSSDPVGPAESLFQASYFELMS 158
L + D ++ DP A +
Sbjct: 60 GRLKDG-----ITYIHSRFEDAQLPRRYDNIVLTHVLEHIDDP--------VALLKRIND 106
Query: 159 RALRPGG---IVCSQAGTLWYSLDCVGNTLQHCASVFPR 194
L GG +VC A + + + H ++V
Sbjct: 107 DWLAEGGRLFLVCPNANAVSRQIAVKMGIISHNSAVTEA 145
>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371
{Clostridium acetobutylicum [TaxId: 1488]}
Length = 246
Score = 28.5 bits (62), Expect = 0.45
Identities = 16/142 (11%), Positives = 40/142 (28%), Gaps = 9/142 (6%)
Query: 42 SYSEMIAFLPLCSHPNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYL 101
+S+ I + ++ L + G G + + A ++ ++ ++
Sbjct: 22 KWSDFIIEKCVENNLVFDDYLDLACGTGNLTENLCPKFKNTWAV--DLSQEMLSEAENKF 79
Query: 102 PGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVIITDSSDPVGPAESLFQASYFELMSRAL 161
+ + + R D YF+ +S L
Sbjct: 80 RSQGLKPRLACQDISNLNINRKFDLITCCLDSTNYIIDSD-------DLKKYFKAVSNHL 132
Query: 162 RPGGIVCSQAGTLWYSLDCVGN 183
+ GG+ + + +GN
Sbjct: 133 KEGGVFIFDINSYYKLSQVLGN 154
>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase
{Escherichia coli [TaxId: 562]}
Length = 190
Score = 28.2 bits (62), Expect = 0.55
Identities = 19/90 (21%), Positives = 32/90 (35%), Gaps = 9/90 (10%)
Query: 59 KKVLIVGGGDGGV------AREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPR 112
K+LI+G G G AR L+ + EV + PG L+ P
Sbjct: 6 SKLLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQLTTTTEV--ENWPGDPNDLTGPL 63
Query: 113 LTVHVGD-GFRFMSEHQQEFDVIITDSSDP 141
L + + +F +E + + + P
Sbjct: 64 LMERMHEHATKFETEIIFDHINKVDLQNRP 93
>d1kdja_ b.6.1.1 (A:) Plastocyanin {Fern (Adiantum capillus-veneris)
[TaxId: 13818]}
Length = 102
Score = 27.1 bits (59), Expect = 0.61
Identities = 10/71 (14%), Positives = 21/71 (29%), Gaps = 3/71 (4%)
Query: 109 SDPRLTVHVGDGFRFMSEHQQEFDVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVC 168
+TV G+ F + +++ + G S +A+ +
Sbjct: 15 YPDSITVSAGEAVEFTLVGETGHNIVFDIPAGAPGTVASELKAASMDENDLLSEDEPSFK 74
Query: 169 ---SQAGTLWY 176
S GT +
Sbjct: 75 AKVSTPGTYTF 85
>d1bypa_ b.6.1.1 (A:) Plastocyanin {White campion (Silene pratensis)
[TaxId: 52853]}
Length = 99
Score = 27.0 bits (59), Expect = 0.62
Identities = 8/68 (11%), Positives = 22/68 (32%)
Query: 109 SDPRLTVHVGDGFRFMSEHQQEFDVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVC 168
L++ G+ F + + + P G + +L++ +
Sbjct: 15 VPSDLSIASGEKITFKNNAGFPHNDLFDKKEVPAGVDVTKISMPEEDLLNAPGEEYSVTL 74
Query: 169 SQAGTLWY 176
++ GT +
Sbjct: 75 TEKGTYKF 82
>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase
DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}
Length = 265
Score = 27.8 bits (60), Expect = 0.76
Identities = 5/17 (29%), Positives = 9/17 (52%)
Query: 56 PNPKKVLIVGGGDGGVA 72
P ++ +VGG G+
Sbjct: 2 PTTDRIAVVGGSISGLT 18
>d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase
FprA {Mycobacterium tuberculosis [TaxId: 1773]}
Length = 239
Score = 27.7 bits (60), Expect = 0.78
Identities = 9/36 (25%), Positives = 15/36 (41%), Gaps = 4/36 (11%)
Query: 58 PKKVLIVGGGDGG--VAREVLK--HPSVESAYLVEI 89
P + IVG G A +LK + + V++
Sbjct: 2 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDM 37
>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis
[TaxId: 1423]}
Length = 234
Score = 27.6 bits (60), Expect = 0.79
Identities = 18/110 (16%), Positives = 31/110 (28%), Gaps = 11/110 (10%)
Query: 59 KKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVG 118
+VL +G G G A + V+ V+ ++EV+ + V +
Sbjct: 18 HRVLDIGAGAGHTALAFSPY--VQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAES 75
Query: 119 DGFRFMSEHQQEFDVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVC 168
F S SD ++R L+ G
Sbjct: 76 LPFPDDSFDIITCRYAAHHFSDV---------RKAVREVARVLKQDGRFL 116
>d1ovma3 c.36.1.9 (A:356-551) Indole-3-pyruvate decarboxylase
{Enterobacter cloacae [TaxId: 550]}
Length = 196
Score = 27.6 bits (60), Expect = 0.87
Identities = 10/35 (28%), Positives = 18/35 (51%)
Query: 144 PAESLFQASYFELMSRALRPGGIVCSQAGTLWYSL 178
P SL Q +++ + +RPG I+ + GT +
Sbjct: 1 PDGSLTQENFWRTLQTFIRPGDIILADQGTSAFGA 35
>d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa
(LmjF30.0810) {Leishmania major [TaxId: 5664]}
Length = 254
Score = 27.6 bits (60), Expect = 0.97
Identities = 9/48 (18%), Positives = 17/48 (35%), Gaps = 1/48 (2%)
Query: 48 AFLPLCSHPNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIE 95
F+ + L G G G + + L + L+E ++E
Sbjct: 84 NFIASLPGHGTSRALDCGAGIGRITKN-LLTKLYATTDLLEPVKHMLE 130
>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase
3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}
Length = 311
Score = 27.6 bits (60), Expect = 1.1
Identities = 19/117 (16%), Positives = 38/117 (32%), Gaps = 7/117 (5%)
Query: 59 KKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVG 118
K VL VG G G ++ K + + V+ E+ + + + + + +T+ G
Sbjct: 37 KVVLDVGCGTGILSMFAAKAGA-KKVLGVDQS----EILYQAMDIIRLNKLEDTITLIKG 91
Query: 119 DGFRFMSEHQQEFDVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQAGTLW 175
++ +I S ++ L GG V T+
Sbjct: 92 KIEEVHLPVEKVDVIIS--EWMGYFLLFESMLDSVLYAKNKYLAKGGSVYPDICTIS 146
>d2cj3a1 b.6.1.1 (A:1-105) Plastocyanin {Anabaena variabilis [TaxId:
1172]}
Length = 105
Score = 26.4 bits (57), Expect = 1.1
Identities = 12/71 (16%), Positives = 27/71 (38%), Gaps = 3/71 (4%)
Query: 109 SDPRLTVHVGDGFRFMSEHQQEFDVIITDSSDPVGPAESLFQASYFELMSRALRPGGI-- 166
+LT+ GD F++ +V+ + +P A+ S+ +L+ +
Sbjct: 17 EPAKLTIKPGDTVEFLNNKVPPHNVVFDAALNPAKSADLAKSLSHKQLLMSPGQSTSTTF 76
Query: 167 -VCSQAGTLWY 176
+ AG +
Sbjct: 77 PADAPAGEYTF 87
>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1
{Salmonella typhimurium [TaxId: 90371]}
Length = 113
Score = 26.2 bits (57), Expect = 1.3
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 49 FLPLCSHPNPKKVLIVGGGDGGVAR 73
LP+ + LIVGGGD +
Sbjct: 3 HLPIFCQLRDRDCLIVGGGDVAERK 27
>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB
{Escherichia coli [TaxId: 562]}
Length = 182
Score = 26.9 bits (58), Expect = 1.5
Identities = 16/102 (15%), Positives = 35/102 (34%), Gaps = 2/102 (1%)
Query: 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTV 115
K ++++G G G + + ++E +++ NR E K L + V
Sbjct: 16 IKGKTMVLLGAG--GASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVV 73
Query: 116 HVGDGFRFMSEHQQEFDVIITDSSDPVGPAESLFQASYFELM 157
V D + + I + VG ++ ++
Sbjct: 74 TVTDLADQQAFAEALASADILTNGTKVGMKPLENESLVNDIS 115
>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase,
N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}
Length = 314
Score = 27.1 bits (59), Expect = 1.6
Identities = 16/80 (20%), Positives = 29/80 (36%), Gaps = 16/80 (20%)
Query: 58 PKKVLIVGGGDGG--VAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTV 115
KK+LIVG G G + R++ + +I+ + ++ G + D V
Sbjct: 2 SKKILIVGAGFSGAVIGRQLAEK---------GHQVHIID-QRDHIGGNSYDARDSETNV 51
Query: 116 HVGDG----FRFMSEHQQEF 131
V F +E +
Sbjct: 52 MVHVYGPHIFHTDNETVWNY 71
>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017
{Pseudomonas aeruginosa [TaxId: 287]}
Length = 212
Score = 26.7 bits (57), Expect = 1.7
Identities = 7/21 (33%), Positives = 10/21 (47%), Gaps = 1/21 (4%)
Query: 58 PKKVLIVGGGDGGVAREVLKH 78
PK+VL+ G G +L
Sbjct: 2 PKRVLLAGAT-GLTGEHLLDR 21
>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase,
domain 3 {Pig (Sus scrofa) [TaxId: 9823]}
Length = 153
Score = 26.3 bits (57), Expect = 1.8
Identities = 12/53 (22%), Positives = 18/53 (33%), Gaps = 5/53 (9%)
Query: 31 GIIQCTEFDEFSYSEMIAFLPLCSHPNP---KKVLIVGGGDGG--VAREVLKH 78
G +F A + C P P V+++G GD A L+
Sbjct: 15 GFYTSKDFLPLVAKSSKAGMCACHSPLPSIRGAVIVLGAGDTAFDCATSALRC 67
>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon
Archaeoglobus fulgidus [TaxId: 2234]}
Length = 209
Score = 26.6 bits (58), Expect = 1.8
Identities = 8/46 (17%), Positives = 14/46 (30%), Gaps = 1/46 (2%)
Query: 55 HPNP-KKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKK 99
++VL +G G + Y VE + E +
Sbjct: 53 KLRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLE 98
>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 328
Score = 26.8 bits (58), Expect = 1.9
Identities = 18/117 (15%), Positives = 37/117 (31%), Gaps = 7/117 (5%)
Query: 59 KKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTVHVG 118
K VL VG G G ++ KH + + V++ + + + G SD + G
Sbjct: 40 KIVLDVGCGTGILSMFAAKHGA-KHVIGVDMSSIIEMAKELV---ELNGFSDKITLLR-G 94
Query: 119 DGFRFMSEHQQEFDVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQAGTLW 175
+ +I + + + L GG++ ++
Sbjct: 95 KLEDVHLPFPKVDIIISEWMGYFLLYESMMD--TVLYARDHYLVEGGLIFPDKCSIH 149
>d1plca_ b.6.1.1 (A:) Plastocyanin {Poplar (Populus nigra), variant
italica [TaxId: 3691]}
Length = 99
Score = 25.9 bits (56), Expect = 1.9
Identities = 10/64 (15%), Positives = 23/64 (35%)
Query: 113 LTVHVGDGFRFMSEHQQEFDVIITDSSDPVGPAESLFQASYFELMSRALRPGGIVCSQAG 172
++ G+ F + +++ + S P G S S +L++ + S G
Sbjct: 19 FSISPGEKIVFKNNAGFPHNIVFDEDSIPSGVDASKISMSEEDLLNAKGETFEVALSNKG 78
Query: 173 TLWY 176
+
Sbjct: 79 EYSF 82
>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase,
middle domain {Escherichia coli [TaxId: 562]}
Length = 179
Score = 25.9 bits (56), Expect = 2.4
Identities = 6/22 (27%), Positives = 11/22 (50%)
Query: 50 LPLCSHPNPKKVLIVGGGDGGV 71
+P+ K + +VG G G+
Sbjct: 35 MPILPAVQKKNLAVVGAGPAGL 56
>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme
M oxidoreductase/carboxylase {Xanthobacter sp., py2
[TaxId: 35809]}
Length = 121
Score = 25.7 bits (55), Expect = 2.7
Identities = 9/34 (26%), Positives = 14/34 (41%), Gaps = 6/34 (17%)
Query: 38 FDEFSYSEMIAFLPLCSHPNPKKVLIVGGGDGGV 71
FD + E + + P V++VGG V
Sbjct: 8 FDHATLVEELDYEP------GSTVVVVGGSKTAV 35
>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase
{Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 192
Score = 25.7 bits (55), Expect = 3.1
Identities = 8/27 (29%), Positives = 11/27 (40%), Gaps = 6/27 (22%)
Query: 57 NPKKVLIVGGGDGGV------AREVLK 77
+ ++ IVG G AR LK
Sbjct: 4 HNTRLCIVGSGPAAHTAAIYAARAELK 30
>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin
reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}
Length = 183
Score = 25.8 bits (55), Expect = 3.3
Identities = 4/14 (28%), Positives = 7/14 (50%)
Query: 58 PKKVLIVGGGDGGV 71
V+++G G V
Sbjct: 3 KAPVVVLGAGLASV 16
>d1vm6a2 d.81.1.3 (A:97-182) Dihydrodipicolinate reductase
{Thermotoga maritima [TaxId: 2336]}
Length = 86
Score = 24.9 bits (54), Expect = 3.5
Identities = 12/53 (22%), Positives = 22/53 (41%), Gaps = 6/53 (11%)
Query: 124 MSEHQQEFDVIITDSSD------PVGPAESLFQASYFELMSRALRPGGIVCSQ 170
+ + +++DV I ++ P G A L A + +LR GG+
Sbjct: 16 LVKVLEDWDVEIVETHHRFKKDAPSGTAILLESALGKSVPIHSLRVGGVPGDH 68
>d1gtra1 b.53.1.2 (A:339-547) Gln-tRNA synthetase (GlnRS),
C-terminal (anticodon-binding) domain {Escherichia coli
[TaxId: 562]}
Length = 209
Score = 25.4 bits (55), Expect = 4.0
Identities = 11/87 (12%), Positives = 29/87 (33%), Gaps = 8/87 (9%)
Query: 57 NPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKK-YLPGMAVGLSDPRLTV 115
+P K++I G + HP+ +R + S + ++ +
Sbjct: 9 DPVKLVIENYQGEGEMVTMPNHPNKPEMG-----SRQVPFSGEIWIDRADFREEANKQYK 63
Query: 116 HVGDG--FRFMSEHQQEFDVIITDSSD 140
+ G R + + + + + D+
Sbjct: 64 RLVLGKEVRLRNAYVIKAERVEKDAEG 90
>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus
faecalis [TaxId: 1351]}
Length = 198
Score = 25.6 bits (54), Expect = 4.0
Identities = 5/12 (41%), Positives = 8/12 (66%)
Query: 60 KVLIVGGGDGGV 71
KV+++G GG
Sbjct: 2 KVIVLGSSHGGY 13
>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces
salmonicolor [TaxId: 5005]}
Length = 342
Score = 25.5 bits (54), Expect = 4.5
Identities = 15/64 (23%), Positives = 19/64 (29%), Gaps = 2/64 (3%)
Query: 56 PNPKKVLIVGGGDGGVAREVLKHPSVESAYLVEIDNRVIEVSKKYLPGMAVGLSDPRLTV 115
P VL+ G G VA V++ +E Y V R T
Sbjct: 9 PEGSLVLVTGAN-GFVASHVVEQ-LLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETA 66
Query: 116 HVGD 119
V D
Sbjct: 67 VVED 70
>d2q9oa1 b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces [TaxId:
204285]}
Length = 162
Score = 25.1 bits (54), Expect = 4.5
Identities = 11/71 (15%), Positives = 17/71 (23%), Gaps = 5/71 (7%)
Query: 111 PRLTVHVGDGFRFMSEHQQEFDVIITDSSDPVGPAESLFQASYFELMSRALRPGG----- 165
P + + GD + + +L + GG
Sbjct: 67 PNIVANWGDTVEVTVINNLVTNGTSIHWHGIHQKDTNLHDGANGVTECPIPPKGGQRTYR 126
Query: 166 IVCSQAGTLWY 176
Q GT WY
Sbjct: 127 WRARQYGTSWY 137
>d2j5pa1 a.4.5.67 (A:1261-1329) DNA translocase FtsK {Escherichia
coli [TaxId: 562]}
Length = 69
Score = 23.8 bits (52), Expect = 5.0
Identities = 7/20 (35%), Positives = 8/20 (40%)
Query: 63 IVGGGDGGVAREVLKHPSVE 82
IV REVL P +
Sbjct: 50 IVSEQGHNGNREVLAPPPFD 69
>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase
{Tobacco (Nicotiana tabacum) [TaxId: 4097]}
Length = 373
Score = 25.6 bits (54), Expect = 5.4
Identities = 6/14 (42%), Positives = 10/14 (71%)
Query: 59 KKVLIVGGGDGGVA 72
K+V ++G G G+A
Sbjct: 2 KRVAVIGAGVSGLA 15
>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS
{Pseudomonas aeruginosa [TaxId: 287]}
Length = 288
Score = 25.1 bits (53), Expect = 5.9
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 58 PKKVLIVGGGDGGVA 72
P +LI G G GG++
Sbjct: 1 PIDILIAGAGIGGLS 15
>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852
{Thermoplasma acidophilum [TaxId: 2303]}
Length = 250
Score = 25.0 bits (54), Expect = 6.1
Identities = 20/129 (15%), Positives = 45/129 (34%), Gaps = 16/129 (12%)
Query: 43 YSEMIAFLPLCSHPNP-KKVLIVGGGDGGVAREVLKHPSVE-SAYLVEIDNRVIEVSKKY 100
+++ + P +L VG G G ++ +L + + + +VE D ++ +
Sbjct: 70 SEIDASYIIMRCGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDN 129
Query: 101 LPGMAVGLSDPRLTVHVGDGFRFMSEHQQEFDVIITDSSDPVGPAESLFQASYFELMSRA 160
L V Q +D +I D DP ++ + ++
Sbjct: 130 LSEFYD-----IGNVRTSRSDIADFISDQMYDAVIADIPDPW---------NHVQKIASM 175
Query: 161 LRPGGIVCS 169
++PG +
Sbjct: 176 MKPGSVATF 184
>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite
reductase {Pyrococcus furiosus [TaxId: 2261]}
Length = 167
Score = 24.7 bits (52), Expect = 7.0
Identities = 8/12 (66%), Positives = 9/12 (75%)
Query: 60 KVLIVGGGDGGV 71
KV+IVG G GG
Sbjct: 2 KVVIVGNGPGGF 13
>d3bswa1 b.81.1.8 (A:3-195) Acetyltransferase PglD {Campylobacter
jejuni [TaxId: 197]}
Length = 193
Score = 24.9 bits (53), Expect = 7.0
Identities = 4/18 (22%), Positives = 6/18 (33%), Gaps = 2/18 (11%)
Query: 59 KKVLIVGGGDGGVAREVL 76
+K+ I G G
Sbjct: 3 EKIYIYGA--SGHGLVCE 18
>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus
pentosus [TaxId: 1589]}
Length = 146
Score = 24.2 bits (52), Expect = 7.9
Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Query: 54 SHPNPKKVLIVGGGDGG--VAREVLKHPSVESAYLVEIDN 91
S PN +KV++VG G G A + + E +V++
Sbjct: 1 SMPNHQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVK 40
>d1qzza2 c.66.1.12 (A:102-357) Aclacinomycin-10-hydroxylase RdmB
{Streptomyces purpurascens [TaxId: 1924]}
Length = 256
Score = 24.6 bits (52), Expect = 8.1
Identities = 11/45 (24%), Positives = 19/45 (42%), Gaps = 4/45 (8%)
Query: 38 FDEF--SYSEMIAFLPLCSHP--NPKKVLIVGGGDGGVAREVLKH 78
FD ++ P ++ + VL VGGG+GG+ +
Sbjct: 58 FDALMSCDEDLAYEAPADAYDWSAVRHVLDVGGGNGGMLAAIALR 102
>d1mj4a_ d.120.1.1 (A:) Sulfite oxidase, N-terminal domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 80
Score = 23.3 bits (50), Expect = 8.6
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 74 EVLKHPSVESAYLVEIDNRVIEVS 97
EV H S E+ V + + V +V+
Sbjct: 9 EVSSHTSPETGIWVTLGSEVFDVT 32
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.321 0.138 0.419
Gapped
Lambda K H
0.267 0.0396 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 750,164
Number of extensions: 34813
Number of successful extensions: 283
Number of sequences better than 10.0: 1
Number of HSP's gapped: 270
Number of HSP's successfully gapped: 74
Length of query: 197
Length of database: 2,407,596
Length adjustment: 81
Effective length of query: 116
Effective length of database: 1,295,466
Effective search space: 150274056
Effective search space used: 150274056
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 50 (23.9 bits)