Your job contains 1 sequence.
>psy4593
MRSYRGYPVLSARQDCTDFMSGPVKNMCGLVVSGAAGPGRVVCPAESLFQASYFELMSRA
LRPGGIVCSQAGTLWYSLDCVGNTLQHCASVFPRVAYGATCVPTYPSGQIGFVLGSQLLK
QHANSHVPMTLS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy4593
(132 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0037723 - symbol:SpdS "Spermidine Synthase" specie... 230 3.1e-19 1
POMBASE|SPBC12C2.07c - symbol:SPBC12C2.07c "spermidine sy... 206 1.1e-16 1
DICTYBASE|DDB_G0268630 - symbol:spsA "Spermidine synthase... 202 2.9e-16 1
UNIPROTKB|J9P2P6 - symbol:SRM "Uncharacterized protein" s... 202 2.9e-16 1
UNIPROTKB|P19623 - symbol:SRM "Spermidine synthase" speci... 201 3.7e-16 1
UNIPROTKB|F1NAH1 - symbol:SRM "Uncharacterized protein" s... 200 4.7e-16 1
TAIR|locus:2016129 - symbol:SPDS2 "spermidine synthase 2"... 200 9.6e-16 1
UNIPROTKB|I3LPB8 - symbol:SRM "Uncharacterized protein" s... 195 1.8e-15 1
RGD|620796 - symbol:Srm "spermidine synthase" species:101... 194 2.4e-15 1
ASPGD|ASPL0000062169 - symbol:spdA species:162425 "Emeric... 191 4.2e-15 1
UNIPROTKB|E1BM12 - symbol:SRM "Uncharacterized protein" s... 191 5.5e-15 1
MGI|MGI:102690 - symbol:Srm "spermidine synthase" species... 191 5.5e-15 1
CGD|CAL0006284 - symbol:SPE3 species:5476 "Candida albica... 187 1.5e-14 1
ZFIN|ZDB-GENE-040426-1183 - symbol:srm "spermidine syntha... 183 3.6e-14 1
SGD|S000006273 - symbol:SPE3 "Spermidine synthase" specie... 170 1.3e-12 1
SGD|S000004136 - symbol:SPE4 "Spermine synthase" species:... 152 1.6e-10 1
WB|WBGene00012909 - symbol:spds-1 species:6239 "Caenorhab... 153 2.1e-10 1
GENEDB_PFALCIPARUM|PF11_0301 - symbol:PF11_0301 "spermidi... 147 7.1e-10 1
UNIPROTKB|Q8II73 - symbol:PF11_0301 "Spermidine synthase"... 147 7.1e-10 1
CGD|CAL0006358 - symbol:orf19.4960 species:5476 "Candida ... 132 3.8e-08 1
TIGR_CMR|BA_5619 - symbol:BA_5619 "spermidine synthase" s... 113 2.8e-06 1
TIGR_CMR|CHY_1621 - symbol:CHY_1621 "spermidine synthase"... 108 1.0e-05 1
UNIPROTKB|P09158 - symbol:speE "SpeE" species:83333 "Esch... 97 0.00018 1
>FB|FBgn0037723 [details] [associations]
symbol:SpdS "Spermidine Synthase" species:7227 "Drosophila
melanogaster" [GO:0004766 "spermidine synthase activity"
evidence=ISS] [GO:0008295 "spermidine biosynthetic process"
evidence=ISS] [GO:0005575 "cellular_component" evidence=ND]
HAMAP:MF_00198 InterPro:IPR001045 Pfam:PF01564 PROSITE:PS01330
PROSITE:PS51006 GO:GO:0016740 GO:GO:0008152 HSSP:Q9WZC2
eggNOG:COG0421 PANTHER:PTHR11558 TIGRFAMs:TIGR00417 EMBL:BT003549
ProteinModelPortal:Q86P04 STRING:Q86P04 PaxDb:Q86P04 PRIDE:Q86P04
FlyBase:FBgn0037723 InParanoid:Q86P04 OrthoDB:EOG473N78
ArrayExpress:Q86P04 Bgee:Q86P04 Uniprot:Q86P04
Length = 299
Score = 230 (86.0 bits), Expect = 3.1e-19, P = 3.1e-19
Identities = 47/102 (46%), Positives = 63/102 (61%)
Query: 15 DCTDFMSGPVKNMCGLVVSGAAGPGRVVCPAESLFQASYFELMSRALRPGGIVCSQAGTL 74
D D+M KN ++++ ++ P + PA SLFQ SY+ELM AL+ GIVCSQ G+
Sbjct: 156 DGFDYMKKH-KNEFDVIITDSSDP---IGPAVSLFQESYYELMKHALKDDGIVCSQGGSF 211
Query: 75 WYSLDCVGNTLQHCASVFPRVAYGATCVPTYPSGQIGFVLGS 116
W LD + T+ C F +VAY T VP+YP G IGFV+GS
Sbjct: 212 WLDLDYIKKTMSGCKEHFAKVAYAVTSVPSYPCGHIGFVMGS 253
>POMBASE|SPBC12C2.07c [details] [associations]
symbol:SPBC12C2.07c "spermidine synthase (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0004766 "spermidine
synthase activity" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0008295 "spermidine biosynthetic
process" evidence=ISO] [GO:0015940 "pantothenate biosynthetic
process" evidence=ISO] InterPro:IPR001045 Pfam:PF01564
PROSITE:PS01330 PROSITE:PS51006 UniPathway:UPA00248
PomBase:SPBC12C2.07c GO:GO:0005829 GO:GO:0005634 EMBL:CU329671
eggNOG:COG0421 KO:K00797 PANTHER:PTHR11558 GO:GO:0008295
GO:GO:0015940 HOGENOM:HOG000256147 GO:GO:0004766 TIGRFAMs:TIGR00417
PIR:T39374 RefSeq:NP_596015.1 ProteinModelPortal:Q09741 SMR:Q09741
STRING:Q09741 PRIDE:Q09741 EnsemblFungi:SPBC12C2.07c.1
GeneID:2539919 KEGG:spo:SPBC12C2.07c OMA:HPTIVDG OrthoDB:EOG48KVM2
NextBio:20801062 Uniprot:Q09741
Length = 298
Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 40/93 (43%), Positives = 59/93 (63%)
Query: 25 KNMCGLVVSGAAGPGRVVCPAESLFQASYFELMSRALRPGGIVCSQAGTLWYSLDCVGNT 84
+N ++++ ++ P PAE+LFQ YF+L+S ALR GG++ +QA +W L + N
Sbjct: 159 QNTFDVIITDSSDPDG---PAEALFQKPYFQLLSDALRGGGVITTQAECMWIHLGVISNV 215
Query: 85 LQHCASVFPRVAYGATCVPTYPSGQIGFVLGSQ 117
L +VFP V Y T +PTYPSG IGFV+ S+
Sbjct: 216 LTAVKTVFPNVRYAYTTIPTYPSGSIGFVVASK 248
>DICTYBASE|DDB_G0268630 [details] [associations]
symbol:spsA "Spermidine synthase" species:44689
"Dictyostelium discoideum" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0004766 "spermidine synthase activity"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0008295 "spermidine biosynthetic process" evidence=IEA]
InterPro:IPR001045 Pfam:PF01564 PROSITE:PS01330 PROSITE:PS51006
UniPathway:UPA00248 dictyBase:DDB_G0268630
GenomeReviews:CM000150_GR EMBL:AAFI02000004 eggNOG:COG0421
KO:K00797 PANTHER:PTHR11558 GO:GO:0008295 GO:GO:0004766
TIGRFAMs:TIGR00417 OMA:ELWYTEK EMBL:AF069757 RefSeq:XP_647009.1
ProteinModelPortal:Q9XY92 SMR:Q9XY92 STRING:Q9XY92
EnsemblProtists:DDB0191167 GeneID:8616702 KEGG:ddi:DDB_G0268630
ProtClustDB:CLSZ2431490 Uniprot:Q9XY92
Length = 284
Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 39/102 (38%), Positives = 60/102 (58%)
Query: 15 DCTDFMSGPVKNMCGLVVSGAAGPGRVVCPAESLFQASYFELMSRALRPGGIVCSQAGTL 74
D +FM K ++++ ++ P + PA+ LF+ +Y+EL+ AL PGGIVCSQ ++
Sbjct: 143 DGMEFMRQR-KGEFDVIITDSSDP---IGPAQGLFERAYYELLKAALAPGGIVCSQCESM 198
Query: 75 WYSLDCVGNTLQHCASVFPRVAYGATCVPTYPSGQIGFVLGS 116
W LD + C ++P V Y T +P+YP G IGF+L S
Sbjct: 199 WLHLDTIKGLTTFCKELYPNVEYAYTSIPSYPGGSIGFILCS 240
>UNIPROTKB|J9P2P6 [details] [associations]
symbol:SRM "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016740 "transferase activity" evidence=IEA]
HAMAP:MF_00198 InterPro:IPR001045 Pfam:PF01564 PROSITE:PS01330
PROSITE:PS51006 GO:GO:0016740 GO:GO:0008152 PANTHER:PTHR11558
TIGRFAMs:TIGR00417 OMA:ELWYTEK GeneTree:ENSGT00620000088039
EMBL:AAEX03001938 Ensembl:ENSCAFT00000045201 Uniprot:J9P2P6
Length = 247
Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 38/74 (51%), Positives = 49/74 (66%)
Query: 44 PAESLFQASYFELMSRALRPGGIVCSQAGTLWYSLDCVGNTLQHCASVFPRVAYGATCVP 103
PAESLF+ SY++LM AL+ G++C Q W LD + Q C S+FP VAY +P
Sbjct: 125 PAESLFKESYYQLMKTALKDNGVLCCQGECQWLHLDLIKQMRQFCKSLFPVVAYAYCTIP 184
Query: 104 TYPSGQIGFVLGSQ 117
TYPSGQIGF+L S+
Sbjct: 185 TYPSGQIGFMLCSK 198
>UNIPROTKB|P19623 [details] [associations]
symbol:SRM "Spermidine synthase" species:9606 "Homo
sapiens" [GO:0008295 "spermidine biosynthetic process"
evidence=IEA;IDA] [GO:0004766 "spermidine synthase activity"
evidence=IDA] [GO:0042803 "protein homodimerization activity"
evidence=IDA] [GO:0005829 "cytosol" evidence=TAS] [GO:0006595
"polyamine metabolic process" evidence=TAS] [GO:0034641 "cellular
nitrogen compound metabolic process" evidence=TAS] [GO:0044281
"small molecule metabolic process" evidence=TAS]
Reactome:REACT_111217 InterPro:IPR001045 Pfam:PF01564
PROSITE:PS01330 PROSITE:PS51006 UniPathway:UPA00248 GO:GO:0005829
GO:GO:0042803 GO:GO:0044281 EMBL:CH471130 DrugBank:DB00127
eggNOG:COG0421 KO:K00797 PANTHER:PTHR11558 GO:GO:0008295
DrugBank:DB00118 EMBL:AL109811 HOGENOM:HOG000256147 GO:GO:0004766
TIGRFAMs:TIGR00417 OMA:ELWYTEK EMBL:M34338 EMBL:M64231
EMBL:BC000309 EMBL:BC033106 IPI:IPI00292020 PIR:A32610
RefSeq:NP_003123.2 UniGene:Hs.76244 PDB:2O05 PDB:2O06 PDB:2O07
PDB:2O0L PDB:3RW9 PDBsum:2O05 PDBsum:2O06 PDBsum:2O07 PDBsum:2O0L
PDBsum:3RW9 ProteinModelPortal:P19623 SMR:P19623 IntAct:P19623
STRING:P19623 PhosphoSite:P19623 DMDM:134811 PaxDb:P19623
PeptideAtlas:P19623 PRIDE:P19623 DNASU:6723 Ensembl:ENST00000376957
GeneID:6723 KEGG:hsa:6723 UCSC:uc001arz.1 CTD:6723
GeneCards:GC01M011114 HGNC:HGNC:11296 HPA:HPA015746 HPA:HPA029528
MIM:182891 neXtProt:NX_P19623 PharmGKB:PA36120 HOVERGEN:HBG000834
InParanoid:P19623 OrthoDB:EOG4H9XM0 PhylomeDB:P19623
BioCyc:MetaCyc:HS04027-MONOMER SABIO-RK:P19623 BindingDB:P19623
ChEMBL:CHEMBL4232 ChiTaRS:SRM EvolutionaryTrace:P19623
GenomeRNAi:6723 NextBio:26226 Bgee:P19623 CleanEx:HS_SRM
Genevestigator:P19623 GermOnline:ENSG00000116649 Uniprot:P19623
Length = 302
Score = 201 (75.8 bits), Expect = 3.7e-16, P = 3.7e-16
Identities = 38/74 (51%), Positives = 49/74 (66%)
Query: 44 PAESLFQASYFELMSRALRPGGIVCSQAGTLWYSLDCVGNTLQHCASVFPRVAYGATCVP 103
PAESLF+ SY++LM AL+ G++C Q W LD + Q C S+FP VAY +P
Sbjct: 180 PAESLFKESYYQLMKTALKEDGVLCCQGECQWLHLDLIKEMRQFCQSLFPVVAYAYCTIP 239
Query: 104 TYPSGQIGFVLGSQ 117
TYPSGQIGF+L S+
Sbjct: 240 TYPSGQIGFMLCSK 253
>UNIPROTKB|F1NAH1 [details] [associations]
symbol:SRM "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004766 "spermidine synthase activity" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
InterPro:IPR001045 Pfam:PF01564 PROSITE:PS01330 PROSITE:PS51006
GO:GO:0008152 PANTHER:PTHR11558 GO:GO:0004766 TIGRFAMs:TIGR00417
GeneTree:ENSGT00620000088039 EMBL:AADN02040752 IPI:IPI00582776
Ensembl:ENSGALT00000004808 OMA:KHASVEH Uniprot:F1NAH1
Length = 210
Score = 200 (75.5 bits), Expect = 4.7e-16, P = 4.7e-16
Identities = 39/74 (52%), Positives = 48/74 (64%)
Query: 44 PAESLFQASYFELMSRALRPGGIVCSQAGTLWYSLDCVGNTLQHCASVFPRVAYGATCVP 103
PAESLF+ SY++LM ALR GI+C Q W LD + Q C S+FP V Y +P
Sbjct: 89 PAESLFKESYYQLMKTALREDGILCCQGECQWLHLDLIKEMRQFCKSLFPVVEYAYCTIP 148
Query: 104 TYPSGQIGFVLGSQ 117
TYPSGQIGF+L S+
Sbjct: 149 TYPSGQIGFMLCSK 162
>TAIR|locus:2016129 [details] [associations]
symbol:SPDS2 "spermidine synthase 2" species:3702
"Arabidopsis thaliana" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0004766
"spermidine synthase activity" evidence=IDA] [GO:0008295
"spermidine biosynthetic process" evidence=RCA;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0000096 "sulfur amino acid metabolic process"
evidence=RCA] [GO:0008652 "cellular amino acid biosynthetic
process" evidence=RCA] [GO:0009069 "serine family amino acid
metabolic process" evidence=RCA] [GO:0009616 "virus induced gene
silencing" evidence=RCA] [GO:0010050 "vegetative phase change"
evidence=RCA] [GO:0042545 "cell wall modification" evidence=RCA]
InterPro:IPR001045 Pfam:PF01564 PROSITE:PS01330 PROSITE:PS51006
UniPathway:UPA00248 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005886 eggNOG:COG0421 KO:K00797 PANTHER:PTHR11558
GO:GO:0008295 EMBL:AC003671 EMBL:AJ251297 EMBL:AF375409
EMBL:AB006693 IPI:IPI00546322 PIR:T01492 RefSeq:NP_177188.1
UniGene:At.20978 ProteinModelPortal:O48661 SMR:O48661 IntAct:O48661
STRING:O48661 PaxDb:O48661 PRIDE:O48661 EnsemblPlants:AT1G70310.1
GeneID:843367 KEGG:ath:AT1G70310 TAIR:At1g70310
HOGENOM:HOG000256147 InParanoid:O48661 OMA:EFSNLLF PhylomeDB:O48661
ProtClustDB:PLN02366 Genevestigator:O48661 GermOnline:AT1G70310
GO:GO:0004766 TIGRFAMs:TIGR00417 Uniprot:O48661
Length = 340
Score = 200 (75.5 bits), Expect = 9.6e-16, P = 9.6e-16
Identities = 41/103 (39%), Positives = 62/103 (60%)
Query: 15 DCTDFMSGPVKNMCGLVVSGAAGPGRVVCPAESLFQASYFELMSRALRPGGIVCSQAGTL 74
D F+ + V+ ++ P + PA+ LF+ +FE ++RALRPGG+VC+QA +L
Sbjct: 186 DGVAFLKNAAEGTYDAVIVDSSDP---IGPAKELFEKPFFESVNRALRPGGVVCTQAESL 242
Query: 75 WYSLDCVGNTLQHCASVFP-RVAYGATCVPTYPSGQIGFVLGS 116
W +D + + + +C +F V Y T VPTYPSG IGF+L S
Sbjct: 243 WLHMDIIEDIVSNCRDIFKGSVNYAWTSVPTYPSGVIGFMLCS 285
>UNIPROTKB|I3LPB8 [details] [associations]
symbol:SRM "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0004766 "spermidine synthase activity"
evidence=IEA] HAMAP:MF_00198 InterPro:IPR001045 Pfam:PF01564
PROSITE:PS01330 PROSITE:PS51006 GO:GO:0008152 KO:K00797
PANTHER:PTHR11558 GO:GO:0004766 TIGRFAMs:TIGR00417 OMA:ELWYTEK
CTD:6723 GeneTree:ENSGT00620000088039 EMBL:CU694468
RefSeq:XP_003481998.1 UniGene:Ssc.1450 Ensembl:ENSSSCT00000029896
GeneID:414385 KEGG:ssc:414385 Uniprot:I3LPB8
Length = 302
Score = 195 (73.7 bits), Expect = 1.8e-15, P = 1.8e-15
Identities = 38/74 (51%), Positives = 48/74 (64%)
Query: 44 PAESLFQASYFELMSRALRPGGIVCSQAGTLWYSLDCVGNTLQHCASVFPRVAYGATCVP 103
PAESLF+ SY++LM AL+ GI+C Q W LD + Q C S+FP V Y +P
Sbjct: 180 PAESLFKESYYQLMKTALKEEGILCCQGECQWLHLDLIKEMRQFCKSLFPVVDYAYCTIP 239
Query: 104 TYPSGQIGFVLGSQ 117
TYPSGQIGF+L S+
Sbjct: 240 TYPSGQIGFMLCSK 253
>RGD|620796 [details] [associations]
symbol:Srm "spermidine synthase" species:10116 "Rattus
norvegicus" [GO:0004766 "spermidine synthase activity"
evidence=ISO;IDA] [GO:0008295 "spermidine biosynthetic process"
evidence=ISO;IDA] [GO:0042803 "protein homodimerization activity"
evidence=ISO] HAMAP:MF_00198 InterPro:IPR001045 Pfam:PF01564
PROSITE:PS01330 PROSITE:PS51006 RGD:620796 HSSP:Q9WZC2
eggNOG:COG0421 KO:K00797 PANTHER:PTHR11558 GO:GO:0008295
HOGENOM:HOG000256147 GO:GO:0004766 TIGRFAMs:TIGR00417 OMA:ELWYTEK
CTD:6723 HOVERGEN:HBG000834 OrthoDB:EOG4H9XM0
GeneTree:ENSGT00620000088039 EMBL:BC128733 EMBL:AF337636
IPI:IPI00197952 RefSeq:NP_445916.1 RefSeq:XP_003749506.1
UniGene:Rn.22258 SMR:Q99MI5 STRING:Q99MI5
Ensembl:ENSRNOT00000014934 GeneID:100912604 GeneID:84596
KEGG:rno:100912604 KEGG:rno:84596 UCSC:RGD:620796 InParanoid:Q99MI5
ChEMBL:CHEMBL2429 NextBio:617217 Genevestigator:Q99MI5
Uniprot:Q99MI5
Length = 302
Score = 194 (73.4 bits), Expect = 2.4e-15, P = 2.4e-15
Identities = 37/74 (50%), Positives = 48/74 (64%)
Query: 44 PAESLFQASYFELMSRALRPGGIVCSQAGTLWYSLDCVGNTLQHCASVFPRVAYGATCVP 103
PAESLF+ SY++LM AL+ GI+C Q W LD + C S+FP V+Y +P
Sbjct: 180 PAESLFKESYYQLMKTALKEDGILCCQGECQWLHLDLIKEMRHFCKSLFPVVSYAYCTIP 239
Query: 104 TYPSGQIGFVLGSQ 117
TYPSGQIGF+L S+
Sbjct: 240 TYPSGQIGFMLCSK 253
>ASPGD|ASPL0000062169 [details] [associations]
symbol:spdA species:162425 "Emericella nidulans"
[GO:0016768 "spermine synthase activity" evidence=RCA] [GO:0008295
"spermidine biosynthetic process" evidence=IMP] [GO:0004766
"spermidine synthase activity" evidence=IEA;RCA] [GO:0006525
"arginine metabolic process" evidence=RCA] [GO:0097308 "cellular
response to farnesol" evidence=IEP] [GO:0005576 "extracellular
region" evidence=IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0015940 "pantothenate
biosynthetic process" evidence=IEA] HAMAP:MF_00198
InterPro:IPR001045 Pfam:PF01564 PROSITE:PS01330 PROSITE:PS51006
EMBL:BN001308 GO:GO:0016740 GO:GO:0008152 KO:K00797
PANTHER:PTHR11558 EMBL:AACD01000010 HOGENOM:HOG000256147
TIGRFAMs:TIGR00417 OMA:ELWYTEK RefSeq:XP_658291.1
ProteinModelPortal:G5EAU1 SMR:G5EAU1 EnsemblFungi:CADANIAT00001983
GeneID:2876458 KEGG:ani:AN0687.2 Uniprot:G5EAU1
Length = 292
Score = 191 (72.3 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 36/71 (50%), Positives = 46/71 (64%)
Query: 44 PAESLFQASYFELMSRALRPGGIVCSQAGTLWYSLDCVGNTLQHCASVFPRVAYGATCVP 103
PAESLFQ YFEL+ ALR GG++ +QA W L + + + C VFP Y T +P
Sbjct: 173 PAESLFQKPYFELLRDALRDGGVITTQAENQWLHLPLIADLKKACNEVFPVAEYAYTTIP 232
Query: 104 TYPSGQIGFVL 114
TYPSGQIGF++
Sbjct: 233 TYPSGQIGFMV 243
>UNIPROTKB|E1BM12 [details] [associations]
symbol:SRM "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0004766 "spermidine synthase activity"
evidence=IEA] HAMAP:MF_00198 InterPro:IPR001045 Pfam:PF01564
PROSITE:PS01330 PROSITE:PS51006 GO:GO:0008152 PANTHER:PTHR11558
GO:GO:0004766 TIGRFAMs:TIGR00417 OMA:ELWYTEK
GeneTree:ENSGT00620000088039 EMBL:DAAA02042967 IPI:IPI00689317
ProteinModelPortal:E1BM12 Ensembl:ENSBTAT00000006978 Uniprot:E1BM12
Length = 302
Score = 191 (72.3 bits), Expect = 5.5e-15, P = 5.5e-15
Identities = 37/74 (50%), Positives = 47/74 (63%)
Query: 44 PAESLFQASYFELMSRALRPGGIVCSQAGTLWYSLDCVGNTLQHCASVFPRVAYGATCVP 103
PAESLF+ SY++LM AL+ GI+C Q W LD + C S+FP V Y +P
Sbjct: 180 PAESLFKESYYQLMKTALKEDGILCCQGECQWLHLDLIKEMRHFCKSLFPVVDYAYCTIP 239
Query: 104 TYPSGQIGFVLGSQ 117
TYPSGQIGF+L S+
Sbjct: 240 TYPSGQIGFMLCSK 253
>MGI|MGI:102690 [details] [associations]
symbol:Srm "spermidine synthase" species:10090 "Mus musculus"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0004766
"spermidine synthase activity" evidence=ISO] [GO:0008295
"spermidine biosynthetic process" evidence=ISO] [GO:0016740
"transferase activity" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=ISO] InterPro:IPR001045
Pfam:PF01564 PROSITE:PS01330 PROSITE:PS51006 UniPathway:UPA00248
MGI:MGI:102690 eggNOG:COG0421 KO:K00797 PANTHER:PTHR11558
GO:GO:0008295 HOGENOM:HOG000256147 GO:GO:0004766 TIGRFAMs:TIGR00417
OMA:ELWYTEK CTD:6723 HOVERGEN:HBG000834 OrthoDB:EOG4H9XM0
EMBL:Z67748 EMBL:L19311 EMBL:BC005566 IPI:IPI00136912
RefSeq:NP_033298.1 UniGene:Mm.10 ProteinModelPortal:Q64674
SMR:Q64674 STRING:Q64674 PhosphoSite:Q64674
REPRODUCTION-2DPAGE:Q64674 PaxDb:Q64674 PRIDE:Q64674
Ensembl:ENSMUST00000006611 GeneID:20810 KEGG:mmu:20810
GeneTree:ENSGT00620000088039 InParanoid:Q64674 NextBio:299527
Bgee:Q64674 CleanEx:MM_SRM Genevestigator:Q64674
GermOnline:ENSMUSG00000006442 Uniprot:Q64674
Length = 302
Score = 191 (72.3 bits), Expect = 5.5e-15, P = 5.5e-15
Identities = 37/74 (50%), Positives = 47/74 (63%)
Query: 44 PAESLFQASYFELMSRALRPGGIVCSQAGTLWYSLDCVGNTLQHCASVFPRVAYGATCVP 103
PAESLF+ SY++LM AL+ GI+C Q W LD + C S+FP V Y +P
Sbjct: 180 PAESLFKESYYQLMKTALKEDGILCCQGECQWLHLDLIKEMRHFCKSLFPVVDYAYCSIP 239
Query: 104 TYPSGQIGFVLGSQ 117
TYPSGQIGF+L S+
Sbjct: 240 TYPSGQIGFMLCSK 253
>CGD|CAL0006284 [details] [associations]
symbol:SPE3 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0015940 "pantothenate biosynthetic process" evidence=IEA]
[GO:0008295 "spermidine biosynthetic process" evidence=IEA]
[GO:0004766 "spermidine synthase activity" evidence=IEA]
HAMAP:MF_00198 InterPro:IPR001045 Pfam:PF01564 PROSITE:PS01330
PROSITE:PS51006 CGD:CAL0006284 EMBL:AACQ01000095 EMBL:AACQ01000096
GO:GO:0016740 GO:GO:0008152 eggNOG:COG0421 KO:K00797
PANTHER:PTHR11558 HOGENOM:HOG000256147 TIGRFAMs:TIGR00417
RefSeq:XP_714778.1 RefSeq:XP_714840.1 ProteinModelPortal:Q59Z50
SMR:Q59Z50 STRING:Q59Z50 GeneID:3643528 GeneID:3643577
KEGG:cal:CaO19.2250 KEGG:cal:CaO19.9790 Uniprot:Q59Z50
Length = 297
Score = 187 (70.9 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 38/105 (36%), Positives = 60/105 (57%)
Query: 25 KNMCGLVVSGAAGPGRVVCPAESLFQASYFELMSRALRPGGIVCSQAGTLWYSLDCVGNT 84
KN ++++ ++ P PAESLFQ YF+L+ AL G++ +QA +W +D +
Sbjct: 159 KNQFDVIITDSSDPEG---PAESLFQKPYFQLLKDALTEKGVITTQAENMWIHMDIISKL 215
Query: 85 LQHCASVFPRVAYGATCVPTYPSGQIGFVLGSQLLKQHANSHVPM 129
+ C +FP Y T +PTYPSG IGF++ S+ +AN P+
Sbjct: 216 KKDCNEIFPVAEYAYTMIPTYPSGSIGFMVCSK--DPNANVSKPI 258
>ZFIN|ZDB-GENE-040426-1183 [details] [associations]
symbol:srm "spermidine synthase" species:7955
"Danio rerio" [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0016740
"transferase activity" evidence=IEA] HAMAP:MF_00198
InterPro:IPR001045 Pfam:PF01564 PROSITE:PS01330 PROSITE:PS51006
ZFIN:ZDB-GENE-040426-1183 GO:GO:0016740 GO:GO:0008152 HSSP:Q9WZC2
eggNOG:COG0421 KO:K00797 PANTHER:PTHR11558 HOGENOM:HOG000256147
TIGRFAMs:TIGR00417 CTD:6723 HOVERGEN:HBG000834 OrthoDB:EOG4H9XM0
EMBL:BC055159 IPI:IPI00502952 RefSeq:NP_957328.2 UniGene:Dr.84961
ProteinModelPortal:Q7SY20 SMR:Q7SY20 STRING:Q7SY20 PRIDE:Q7SY20
GeneID:394009 KEGG:dre:394009 InParanoid:Q7SY20 NextBio:20814975
ArrayExpress:Q7SY20 Bgee:Q7SY20 Uniprot:Q7SY20
Length = 289
Score = 183 (69.5 bits), Expect = 3.6e-14, P = 3.6e-14
Identities = 37/88 (42%), Positives = 54/88 (61%)
Query: 30 LVVSGAAGPGRVVCPAESLFQASYFELMSRALRPGGIVCSQAGTLWYSLDCVGNTLQHCA 89
++++ ++ P V PAESL + SY++LM AL GGI+C Q W L+ + C
Sbjct: 157 IIITDSSDP---VGPAESLLKESYYQLMKTALCEGGILCCQGECQWLHLELIKEMRTFCK 213
Query: 90 SVFPRVAYGATCVPTYPSGQIGFVLGSQ 117
++FP V Y +PTYPSGQIGF+L S+
Sbjct: 214 TLFPVVDYAYCTIPTYPSGQIGFMLCSK 241
>SGD|S000006273 [details] [associations]
symbol:SPE3 "Spermidine synthase" species:4932 "Saccharomyces
cerevisiae" [GO:0008295 "spermidine biosynthetic process"
evidence=IEA;IMP] [GO:0005634 "nucleus" evidence=IDA] [GO:0015940
"pantothenate biosynthetic process" evidence=IMP] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0004766 "spermidine synthase
activity" evidence=IEA;ISS;IMP] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
InterPro:IPR001045 Pfam:PF01564 PROSITE:PS01330 PROSITE:PS51006
UniPathway:UPA00248 SGD:S000006273 GO:GO:0005634 GO:GO:0005737
EMBL:Z71255 EMBL:BK006949 eggNOG:COG0421 KO:K00797
PANTHER:PTHR11558 GO:GO:0008295 EMBL:U51033 EMBL:Z49219
GO:GO:0015940 HOGENOM:HOG000256147 GO:GO:0004766 TIGRFAMs:TIGR00417
GeneTree:ENSGT00620000088039 OMA:HPTIVDG OrthoDB:EOG48KVM2
EMBL:U27519 PIR:S54090 RefSeq:NP_015394.1 ProteinModelPortal:Q12074
SMR:Q12074 DIP:DIP-6618N IntAct:Q12074 MINT:MINT-644204
STRING:Q12074 PaxDb:Q12074 PeptideAtlas:Q12074 EnsemblFungi:YPR069C
GeneID:856182 KEGG:sce:YPR069C CYGD:YPR069c NextBio:981355
Genevestigator:Q12074 GermOnline:YPR069C Uniprot:Q12074
Length = 293
Score = 170 (64.9 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 32/93 (34%), Positives = 57/93 (61%)
Query: 25 KNMCGLVVSGAAGPGRVVCPAESLFQASYFELMSRALRPGGIVCSQAGTLWYSLDCVGNT 84
+N ++++ ++ P PAE+LFQ YF+L++ AL G++ +QA ++W L + +
Sbjct: 159 QNTFDVIITDSSDPEG---PAETLFQKEYFQLLNSALTEKGVITTQAESMWIHLPIIKDL 215
Query: 85 LQHCASVFPRVAYGATCVPTYPSGQIGFVLGSQ 117
+ C+ VFP Y +PTYP+G IGF++ S+
Sbjct: 216 KKACSEVFPVAEYSFVTIPTYPTGTIGFMVCSK 248
>SGD|S000004136 [details] [associations]
symbol:SPE4 "Spermine synthase" species:4932 "Saccharomyces
cerevisiae" [GO:0006597 "spermine biosynthetic process"
evidence=IEA;IMP] [GO:0015940 "pantothenate biosynthetic process"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016768
"spermine synthase activity" evidence=IEA;IMP] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0016740 "transferase
activity" evidence=IEA] InterPro:IPR001045 Pfam:PF01564
PROSITE:PS01330 PROSITE:PS51006 UniPathway:UPA00249 SGD:S000004136
GO:GO:0005737 EMBL:BK006945 eggNOG:COG0421 GO:GO:0016768
PANTHER:PTHR11558 EMBL:U53879 GO:GO:0006597 GO:GO:0015940
HOGENOM:HOG000256147 TIGRFAMs:TIGR00417 KO:K00802 EMBL:AF067970
EMBL:Z73318 EMBL:AY899255 PIR:S64995 RefSeq:NP_013247.1
ProteinModelPortal:Q12455 SMR:Q12455 DIP:DIP-4811N IntAct:Q12455
MINT:MINT-475905 STRING:Q12455 PaxDb:Q12455 EnsemblFungi:YLR146C
GeneID:850838 KEGG:sce:YLR146C CYGD:YLR146c
GeneTree:ENSGT00620000088036 OMA:VIMQSSE OrthoDB:EOG4QVGN4
NextBio:967117 Genevestigator:Q12455 GermOnline:YLR146C
Uniprot:Q12455
Length = 300
Score = 152 (58.6 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 33/89 (37%), Positives = 48/89 (53%)
Query: 44 PAESLFQASYFELMSRALRPGGIVCSQAG-TLWYSLDCVGNTLQHCASVFPRVAYGATCV 102
PAE+ FQ YFEL+ AL P G+V Q+ W +L + + VFP Y T V
Sbjct: 181 PAEAFFQERYFELLKDALNPNGVVIMQSSENFWLNLKYLHDLKNTAKKVFPNTEYCYTMV 240
Query: 103 PTYPSGQIGFVLGSQLLKQHANSHVPMTL 131
PTY SGQ+G ++ S N+++P+ +
Sbjct: 241 PTYTSGQLGLIVCSN------NANIPLNI 263
>WB|WBGene00012909 [details] [associations]
symbol:spds-1 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] HAMAP:MF_00198
InterPro:IPR001045 Pfam:PF01564 PROSITE:PS01330 PROSITE:PS51006
GO:GO:0016740 GO:GO:0008152 eggNOG:COG0421 KO:K00797
PANTHER:PTHR11558 EMBL:AL110485 HOGENOM:HOG000256147
TIGRFAMs:TIGR00417 GeneTree:ENSGT00620000088039
RefSeq:NP_001129829.1 UniGene:Cel.19379 ProteinModelPortal:B4E3X6
SMR:B4E3X6 STRING:B4E3X6 PaxDb:B4E3X6 EnsemblMetazoa:Y46G5A.19b.1
EnsemblMetazoa:Y46G5A.19b.2 GeneID:174914 KEGG:cel:CELE_Y46G5A.19
CTD:174914 WormBase:Y46G5A.19b InParanoid:B4E3X6 OMA:AKYAVGS
NextBio:886020 ArrayExpress:B4E3X6 Uniprot:B4E3X6
Length = 366
Score = 153 (58.9 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 32/90 (35%), Positives = 49/90 (54%)
Query: 25 KNMCGLVVSGAAGPGRVVCPAESLFQASYFELMSRALRPGGIVCSQAGTLWYSLDCVGNT 84
KN ++++ ++ P V PAESLF SY+EL+ AL+ GI+ SQ W + +
Sbjct: 179 KNEFDVIITDSSDP---VGPAESLFGQSYYELLRDALKEDGILSSQGECPWLDMKLISTV 235
Query: 85 LQHCASVFPRVAYGATCVPTYPSGQIGFVL 114
+ +FP Y VPTY SG +G++L
Sbjct: 236 IHSARDLFPVAKYAVGSVPTYTSGLMGYIL 265
>GENEDB_PFALCIPARUM|PF11_0301 [details] [associations]
symbol:PF11_0301 "spermidine synthase"
species:5833 "Plasmodium falciparum" [GO:0004766 "spermidine
synthase activity" evidence=ISS] [GO:0008295 "spermidine
biosynthetic process" evidence=ISS] [GO:0005575
"cellular_component" evidence=ND] HAMAP:MF_00198 InterPro:IPR001045
Pfam:PF01564 PROSITE:PS01330 PROSITE:PS51006 KO:K00797
PANTHER:PTHR11558 GO:GO:0008295 EMBL:AE014186 HOGENOM:HOG000256147
GO:GO:0004766 TIGRFAMs:TIGR00417 ProtClustDB:CLSZ2431490
RefSeq:XP_001347972.1 PDB:2HTE PDB:2I7C PDB:2PSS PDB:2PT6 PDB:2PT9
PDB:2PWP PDB:3B7P PDB:3RIE PDBsum:2HTE PDBsum:2I7C PDBsum:2PSS
PDBsum:2PT6 PDBsum:2PT9 PDBsum:2PWP PDBsum:3B7P PDBsum:3RIE
ProteinModelPortal:Q8II73 SMR:Q8II73 PRIDE:Q8II73
EnsemblProtists:PF11_0301:mRNA GeneID:810848 KEGG:pfa:PF11_0301
EuPathDB:PlasmoDB:PF3D7_1129000 OMA:CNMAESM
EvolutionaryTrace:Q8II73 Uniprot:Q8II73
Length = 321
Score = 147 (56.8 bits), Expect = 7.1e-10, P = 7.1e-10
Identities = 30/104 (28%), Positives = 56/104 (53%)
Query: 14 QDCTDFMSGPVKNMCGLVVSGAAGPGRVVCPAESLFQASYFELMSRALRPGGIVCSQAGT 73
+D + F+ V N +++ ++ P + PAE+LF +++E + AL+P G +Q +
Sbjct: 177 EDASKFLEN-VTNTYDVIIVDSSDP---IGPAETLFNQNFYEKIYNALKPNGYCVAQCES 232
Query: 74 LWYSLDCVGNTLQHCASVFPRVAYGATCVPTYPSGQIGFVLGSQ 117
LW + + N + + +F +V Y +PTYP G IG + S+
Sbjct: 233 LWIHVGTIKNMIGYAKKLFKKVEYANISIPTYPCGCIGILCCSK 276
>UNIPROTKB|Q8II73 [details] [associations]
symbol:PF11_0301 "Spermidine synthase" species:36329
"Plasmodium falciparum 3D7" [GO:0004766 "spermidine synthase
activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008295 "spermidine biosynthetic process"
evidence=ISS] HAMAP:MF_00198 InterPro:IPR001045 Pfam:PF01564
PROSITE:PS01330 PROSITE:PS51006 KO:K00797 PANTHER:PTHR11558
GO:GO:0008295 EMBL:AE014186 HOGENOM:HOG000256147 GO:GO:0004766
TIGRFAMs:TIGR00417 ProtClustDB:CLSZ2431490 RefSeq:XP_001347972.1
PDB:2HTE PDB:2I7C PDB:2PSS PDB:2PT6 PDB:2PT9 PDB:2PWP PDB:3B7P
PDB:3RIE PDBsum:2HTE PDBsum:2I7C PDBsum:2PSS PDBsum:2PT6
PDBsum:2PT9 PDBsum:2PWP PDBsum:3B7P PDBsum:3RIE
ProteinModelPortal:Q8II73 SMR:Q8II73 PRIDE:Q8II73
EnsemblProtists:PF11_0301:mRNA GeneID:810848 KEGG:pfa:PF11_0301
EuPathDB:PlasmoDB:PF3D7_1129000 OMA:CNMAESM
EvolutionaryTrace:Q8II73 Uniprot:Q8II73
Length = 321
Score = 147 (56.8 bits), Expect = 7.1e-10, P = 7.1e-10
Identities = 30/104 (28%), Positives = 56/104 (53%)
Query: 14 QDCTDFMSGPVKNMCGLVVSGAAGPGRVVCPAESLFQASYFELMSRALRPGGIVCSQAGT 73
+D + F+ V N +++ ++ P + PAE+LF +++E + AL+P G +Q +
Sbjct: 177 EDASKFLEN-VTNTYDVIIVDSSDP---IGPAETLFNQNFYEKIYNALKPNGYCVAQCES 232
Query: 74 LWYSLDCVGNTLQHCASVFPRVAYGATCVPTYPSGQIGFVLGSQ 117
LW + + N + + +F +V Y +PTYP G IG + S+
Sbjct: 233 LWIHVGTIKNMIGYAKKLFKKVEYANISIPTYPCGCIGILCCSK 276
>CGD|CAL0006358 [details] [associations]
symbol:orf19.4960 species:5476 "Candida albicans" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0016768 "spermine synthase activity"
evidence=IEA] [GO:0015940 "pantothenate biosynthetic process"
evidence=IEA] [GO:0006597 "spermine biosynthetic process"
evidence=IEA] HAMAP:MF_00198 InterPro:IPR001045 Pfam:PF01564
PROSITE:PS01330 PROSITE:PS51006 CGD:CAL0006358 GO:GO:0016740
GO:GO:0008152 eggNOG:COG0421 PANTHER:PTHR11558 EMBL:AACQ01000010
EMBL:AACQ01000009 HOGENOM:HOG000256147 TIGRFAMs:TIGR00417
RefSeq:XP_722170.1 RefSeq:XP_722282.1 ProteinModelPortal:Q5AL17
STRING:Q5AL17 GeneID:3636054 GeneID:3636150 KEGG:cal:CaO19.12425
KEGG:cal:CaO19.4960 Uniprot:Q5AL17
Length = 344
Score = 132 (51.5 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 34/119 (28%), Positives = 59/119 (49%)
Query: 1 MRSYRGYPVLSAR-QDCTDFMSGPVKNM-CGLVVSGAAGPGRVVCPAESLFQASYFELMS 58
M Y +P ++ D +F+ K ++++ ++ P PAE FQ +YF+L+
Sbjct: 181 MAKYHNHPKVNLIIGDGFEFLKNSSKEKKYDVIITDSSDPDDG--PAEEFFQINYFKLLL 238
Query: 59 RALRPGGIVCSQAG-TLWYSLDCVGNTLQHCASVFPRVAYGATCVPTYPSGQIGFVLGS 116
AL GIV Q+ +W +L + A+VF V Y +P+Y SGQ+G ++ +
Sbjct: 239 NALNEKGIVIMQSSENIWLNLPYLKELKSKAATVFSNVKYCQCYMPSYTSGQLGLIIAT 297
>TIGR_CMR|BA_5619 [details] [associations]
symbol:BA_5619 "spermidine synthase" species:198094
"Bacillus anthracis str. Ames" [GO:0004766 "spermidine synthase
activity" evidence=ISS] [GO:0008295 "spermidine biosynthetic
process" evidence=ISS] HAMAP:MF_00198 InterPro:IPR001045
Pfam:PF01564 PROSITE:PS01330 PROSITE:PS51006 UniPathway:UPA00248
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR eggNOG:COG0421
KO:K00797 PANTHER:PTHR11558 GO:GO:0008295 GO:GO:0004766
TIGRFAMs:TIGR00417 RefSeq:NP_847770.1 RefSeq:YP_031458.1
RefSeq:YP_052657.1 ProteinModelPortal:Q81JT0 SMR:Q81JT0
DNASU:1085326 EnsemblBacteria:EBBACT00000012133
EnsemblBacteria:EBBACT00000016227 EnsemblBacteria:EBBACT00000021818
GeneID:1085326 GeneID:2821015 GeneID:2848266 KEGG:ban:BA_5619
KEGG:bar:GBAA_5619 KEGG:bat:BAS5219 HOGENOM:HOG000256146
OMA:ELWYTEK ProtClustDB:PRK00811
BioCyc:BANT260799:GJAJ-5294-MONOMER
BioCyc:BANT261594:GJ7F-5475-MONOMER Uniprot:Q81JT0
Length = 275
Score = 113 (44.8 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 23/76 (30%), Positives = 39/76 (51%)
Query: 42 VCPAESLFQASYFELMSRALRPGGIVCSQAGTLWYSLDCVGNTLQHCASVFPRVAYGATC 101
V PA +LF ++ +S+AL+ GI +Q W++ + + + +FP
Sbjct: 160 VGPAVNLFTKGFYAGISKALKEDGIFVAQTDNPWFTPELITTVFKDVKEIFPITRLYTAN 219
Query: 102 VPTYPSGQIGFVLGSQ 117
+PTYPSG F +GS+
Sbjct: 220 IPTYPSGLWTFTIGSK 235
>TIGR_CMR|CHY_1621 [details] [associations]
symbol:CHY_1621 "spermidine synthase" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0004766 "spermidine
synthase activity" evidence=ISS] [GO:0008295 "spermidine
biosynthetic process" evidence=ISS] HAMAP:MF_00198
InterPro:IPR001045 Pfam:PF01564 PROSITE:PS51006 UniPathway:UPA00248
EMBL:CP000141 GenomeReviews:CP000141_GR eggNOG:COG0421 KO:K00797
PANTHER:PTHR11558 GO:GO:0008295 GO:GO:0004766 TIGRFAMs:TIGR00417
HOGENOM:HOG000256146 OMA:ELWYTEK ProtClustDB:PRK00811
RefSeq:YP_360444.1 ProteinModelPortal:Q3ABP0 SMR:Q3ABP0
STRING:Q3ABP0 GeneID:3727006 KEGG:chy:CHY_1621 PATRIC:21276363
BioCyc:CHYD246194:GJCN-1620-MONOMER Uniprot:Q3ABP0
Length = 277
Score = 108 (43.1 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 27/77 (35%), Positives = 42/77 (54%)
Query: 42 VCPAESLFQASYFELMSRALRPGGIVCSQAGTLWYSLDCVGNTLQHCASVFPRVA-YGAT 100
V PA LF +++ + +L+ GI+ +Q + +++ D + N+ FP Y AT
Sbjct: 161 VGPAVELFSEDFYKNVYESLKDDGIMVAQTESPFFNRDIIKNSFTRIGKNFPITRLYFAT 220
Query: 101 CVPTYPSGQIGFVLGSQ 117
VPTYPSG F LGS+
Sbjct: 221 -VPTYPSGVWTFTLGSK 236
>UNIPROTKB|P09158 [details] [associations]
symbol:speE "SpeE" species:83333 "Escherichia coli K-12"
[GO:0005829 "cytosol" evidence=IDA] [GO:0008295 "spermidine
biosynthetic process" evidence=IEA;IMP] [GO:0004766 "spermidine
synthase activity" evidence=IEA;IMP;IDA] HAMAP:MF_00198
InterPro:IPR001045 Pfam:PF01564 PROSITE:PS01330 PROSITE:PS51006
UniPathway:UPA00248 GO:GO:0005829 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR eggNOG:COG0421
KO:K00797 PANTHER:PTHR11558 GO:GO:0008295 GO:GO:0004766
TIGRFAMs:TIGR00417 EMBL:J02804 HOGENOM:HOG000256146 OMA:ELWYTEK
ProtClustDB:PRK00811 PIR:A29778 RefSeq:NP_414663.1
RefSeq:YP_488424.1 PDB:3O4F PDBsum:3O4F ProteinModelPortal:P09158
SMR:P09158 DIP:DIP-10908N IntAct:P09158 MINT:MINT-1231846
SWISS-2DPAGE:P09158 PRIDE:P09158 EnsemblBacteria:EBESCT00000002909
EnsemblBacteria:EBESCT00000014446 GeneID:12933098 GeneID:947726
KEGG:ecj:Y75_p0118 KEGG:eco:b0121 PATRIC:32115343 EchoBASE:EB0956
EcoGene:EG10963 BioCyc:EcoCyc:SPERMIDINESYN-MONOMER
BioCyc:ECOL316407:JW0117-MONOMER
BioCyc:MetaCyc:SPERMIDINESYN-MONOMER Genevestigator:P09158
Uniprot:P09158
Length = 288
Score = 97 (39.2 bits), Expect = 0.00018, P = 0.00018
Identities = 23/83 (27%), Positives = 41/83 (49%)
Query: 30 LVVSGAAGPGRVVCPAESLFQASYFELMSRALRPGGIVCSQAGTLWYSLDCVGNTLQHCA 89
+++S P + P ESLF ++++E R L PGGI +Q G + + ++ + +
Sbjct: 154 VIISDCTDP---IGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLS 210
Query: 90 SVFPRVAYGATCVPTYPSGQIGF 112
F V + +PTY G + F
Sbjct: 211 HYFSDVGFYQAAIPTYYGGIMTF 233
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.136 0.436 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 132 132 0.00091 102 3 11 22 0.37 31
30 0.43 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 23
No. of states in DFA: 583 (62 KB)
Total size of DFA: 139 KB (2085 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 11.72u 0.09s 11.81t Elapsed: 00:00:09
Total cpu time: 11.72u 0.09s 11.81t Elapsed: 00:00:12
Start: Thu Aug 15 11:28:07 2013 End: Thu Aug 15 11:28:19 2013