Query psy4596
Match_columns 439
No_of_seqs 417 out of 2715
Neff 8.9
Searched_HMMs 29240
Date Fri Aug 16 20:57:59 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4596.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/4596hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2xkx_A Disks large homolog 4; 100.0 1.6E-29 5.3E-34 269.8 29.6 242 9-350 83-391 (721)
2 3gsl_A Disks large homolog 4; 100.0 9.4E-27 3.2E-31 209.6 24.4 187 157-351 3-191 (196)
3 3r0h_A INAD, inactivation-NO-a 99.9 2E-25 6.9E-30 202.6 22.6 176 159-352 18-198 (206)
4 2qt5_A Glutamate receptor-inte 99.9 8.1E-23 2.8E-27 184.6 23.3 178 159-350 7-195 (200)
5 1p1d_A PDZ45, glutamate recept 99.9 8.9E-23 3E-27 183.7 23.1 180 159-349 6-194 (196)
6 2xkx_A Disks large homolog 4; 99.9 2.6E-22 8.9E-27 214.1 26.9 188 156-351 56-245 (721)
7 1w9e_A Syntenin 1; cell adhesi 99.9 4.1E-20 1.4E-24 161.6 22.6 158 159-348 4-164 (166)
8 3gsl_A Disks large homolog 4; 99.9 1.9E-20 6.5E-25 168.2 20.0 155 10-253 30-192 (196)
9 3r0h_A INAD, inactivation-NO-a 99.8 1.8E-19 6.3E-24 163.2 19.0 142 15-253 45-198 (206)
10 3suz_A Amyloid beta A4 precurs 99.8 1.9E-21 6.3E-26 192.6 6.2 165 159-349 204-373 (388)
11 2qt5_A Glutamate receptor-inte 99.8 6.9E-18 2.4E-22 152.1 19.7 157 14-252 32-196 (200)
12 4a8c_A Periplasmic PH-dependen 99.8 6.1E-18 2.1E-22 170.1 17.6 170 169-351 240-421 (436)
13 3pv2_A DEGQ; trypsin fold, PDZ 99.7 6.3E-18 2.1E-22 170.4 13.9 170 169-350 258-443 (451)
14 1p1d_A PDZ45, glutamate recept 99.7 6.4E-17 2.2E-21 145.2 17.3 150 14-251 35-195 (196)
15 3rle_A Golgi reassembly-stacki 99.7 3.6E-17 1.2E-21 148.3 14.2 148 191-350 16-170 (209)
16 3rle_A Golgi reassembly-stacki 99.7 6.9E-16 2.4E-20 139.8 16.4 173 12-276 13-198 (209)
17 1w9e_A Syntenin 1; cell adhesi 99.6 4.7E-15 1.6E-19 129.4 17.0 129 14-248 26-163 (166)
18 1ky9_A Protease DO, DEGP, HTRA 99.6 4.6E-17 1.6E-21 164.0 1.1 164 170-350 264-440 (448)
19 1r6j_A Syntenin 1; PDZ, membra 99.6 7E-15 2.4E-19 111.5 10.0 76 257-349 6-81 (82)
20 4a8c_A Periplasmic PH-dependen 99.6 3.1E-14 1E-18 143.1 17.4 155 14-253 262-422 (436)
21 3suz_A Amyloid beta A4 precurs 99.6 6.8E-16 2.3E-20 152.7 3.7 130 15-250 232-373 (388)
22 1uju_A Scribble; PDZ domain, c 99.5 2E-14 6.9E-19 116.6 8.8 101 252-352 6-106 (111)
23 3pv2_A DEGQ; trypsin fold, PDZ 99.5 6.2E-14 2.1E-18 141.2 13.9 157 15-252 282-444 (451)
24 1uhp_A Hypothetical protein KI 99.5 2.4E-13 8.3E-18 109.4 13.9 96 157-253 6-103 (107)
25 2i1n_A Discs, large homolog 3; 99.5 2.3E-13 7.8E-18 108.5 13.5 94 157-253 2-96 (102)
26 3gge_A PDZ domain-containing p 99.5 1.5E-13 5E-18 106.3 11.0 81 257-349 7-89 (95)
27 3b76_A E3 ubiquitin-protein li 99.5 1.5E-13 5.2E-18 112.4 11.3 87 258-350 27-113 (118)
28 2fe5_A Presynaptic protein SAP 99.5 4.7E-13 1.6E-17 104.9 13.6 91 158-251 2-93 (94)
29 2awx_A Synapse associated prot 99.5 6.2E-13 2.1E-17 106.6 13.3 92 159-253 3-95 (105)
30 4amh_A Disks large homolog 1; 99.5 7E-13 2.4E-17 106.4 13.4 91 169-262 13-103 (106)
31 4amh_A Disks large homolog 1; 99.5 3.8E-13 1.3E-17 108.0 11.1 87 261-351 7-93 (106)
32 1d5g_A Human phosphatase HPTP1 99.5 1.3E-12 4.6E-17 102.8 13.7 90 159-253 5-95 (96)
33 2vwr_A Ligand of NUMB protein 99.5 9.2E-13 3.1E-17 103.5 12.6 87 158-253 2-91 (95)
34 2jik_A Synaptojanin-2 binding 99.4 1.4E-12 4.9E-17 103.6 13.6 92 159-253 7-99 (101)
35 2iwo_A Multiple PDZ domain pro 99.4 1.9E-13 6.4E-18 112.3 8.5 90 256-351 25-114 (120)
36 1mfg_A ERB-B2 interacting prot 99.4 1.3E-12 4.6E-17 102.6 13.1 90 160-251 4-93 (95)
37 1uhp_A Hypothetical protein KI 99.4 9.8E-13 3.3E-17 105.8 12.5 91 258-351 11-102 (107)
38 2ehr_A INAD-like protein; PDZ 99.4 7.8E-13 2.7E-17 108.2 12.0 95 257-351 17-111 (117)
39 2he4_A Na(+)/H(+) exchange reg 99.4 1.5E-12 5.1E-17 101.2 13.0 84 159-252 4-88 (90)
40 1wi4_A Synip, syntaxin binding 99.4 1.7E-12 5.7E-17 104.7 13.5 89 159-253 15-107 (109)
41 1v62_A KIAA1719 protein; struc 99.4 6.7E-13 2.3E-17 108.5 11.2 87 257-351 17-103 (117)
42 2dc2_A GOPC, golgi associated 99.4 3.3E-13 1.1E-17 107.8 9.0 86 257-352 11-97 (103)
43 2q3g_A PDZ and LIM domain prot 99.4 7.8E-13 2.7E-17 102.6 10.9 85 159-252 3-87 (89)
44 2byg_A Channel associated prot 99.4 1.3E-12 4.4E-17 106.8 12.6 90 159-251 24-114 (117)
45 1kwa_A Hcask/LIN-2 protein; PD 99.4 7.3E-13 2.5E-17 102.5 10.5 82 257-350 3-85 (88)
46 2qg1_A Multiple PDZ domain pro 99.4 9.3E-13 3.2E-17 102.8 11.2 83 258-350 7-89 (92)
47 2jil_A GRIP1 protein, glutamat 99.4 1.3E-12 4.4E-17 103.1 12.1 91 159-253 3-94 (97)
48 3cbz_A Dishevelled-2; PDZ doma 99.4 6.4E-13 2.2E-17 107.0 10.5 89 159-253 5-98 (108)
49 3cbz_A Dishevelled-2; PDZ doma 99.4 3.8E-13 1.3E-17 108.4 9.0 87 258-351 8-97 (108)
50 1m5z_A GRIP, AMPA receptor int 99.4 2.5E-12 8.4E-17 100.2 13.4 83 159-251 6-91 (91)
51 2db5_A INAD-like protein; PDZ 99.4 4.1E-13 1.4E-17 111.7 9.3 87 259-351 29-116 (128)
52 1g9o_A NHE-RF; PDZ domain, com 99.4 2.5E-12 8.6E-17 100.1 13.2 82 159-250 3-85 (91)
53 1rgw_A ZAsp protein; PDZ, cyph 99.4 1.1E-12 3.8E-17 100.8 11.0 82 161-251 3-84 (85)
54 2byg_A Channel associated prot 99.4 1E-12 3.6E-17 107.4 11.3 88 257-349 26-113 (117)
55 1wf8_A Neurabin-I; PDZ domain, 99.4 1.3E-12 4.3E-17 105.1 11.6 93 156-253 6-102 (107)
56 1r6j_A Syntenin 1; PDZ, membra 99.4 1.1E-12 3.7E-17 99.4 10.5 75 159-249 4-80 (82)
57 2opg_A Multiple PDZ domain pro 99.4 3.1E-12 1.1E-16 101.0 13.7 88 159-253 4-92 (98)
58 2uzc_A Human pdlim5, PDZ and L 99.4 1.8E-12 6.1E-17 100.3 12.0 84 159-251 3-86 (88)
59 2awx_A Synapse associated prot 99.4 1.3E-12 4.6E-17 104.6 11.6 89 258-351 6-94 (105)
60 3b76_A E3 ubiquitin-protein li 99.4 1.9E-12 6.4E-17 105.8 12.6 88 159-251 24-113 (118)
61 1wha_A KIAA0147 protein, scrib 99.4 2.3E-12 7.9E-17 103.2 12.8 92 159-252 7-99 (105)
62 2ejy_A 55 kDa erythrocyte memb 99.4 6.7E-13 2.3E-17 104.4 9.3 82 257-349 14-95 (97)
63 1uep_A Membrane associated gua 99.4 9.2E-13 3.2E-17 105.2 10.0 90 156-253 6-98 (103)
64 2qg1_A Multiple PDZ domain pro 99.4 2.5E-12 8.6E-17 100.3 12.2 84 159-251 4-89 (92)
65 2v90_A PDZ domain-containing p 99.4 2.1E-12 7.1E-17 101.7 11.7 89 159-254 3-92 (96)
66 1n7e_A AMPA receptor interacti 99.4 4.3E-12 1.5E-16 100.0 13.5 87 159-253 5-92 (97)
67 2fe5_A Presynaptic protein SAP 99.4 1.8E-12 6.3E-17 101.5 11.3 87 258-349 6-92 (94)
68 1m5z_A GRIP, AMPA receptor int 99.4 1.8E-12 6.3E-17 100.9 11.2 82 257-349 8-90 (91)
69 2pkt_A PDZ and LIM domain prot 99.4 2.7E-12 9.1E-17 100.0 12.0 85 160-253 4-88 (91)
70 3l4f_D SH3 and multiple ankyri 99.4 1.6E-12 5.4E-17 108.6 11.4 94 257-351 29-125 (132)
71 3o46_A Maguk P55 subfamily mem 99.4 1.7E-12 5.7E-17 101.6 10.8 83 257-350 6-88 (93)
72 1mfg_A ERB-B2 interacting prot 99.4 2.7E-12 9.2E-17 100.8 12.0 81 266-349 12-92 (95)
73 2i1n_A Discs, large homolog 3; 99.4 2.8E-12 9.7E-17 102.1 12.2 88 259-351 8-95 (102)
74 2q9v_A Membrane-associated gua 99.4 1.6E-12 5.4E-17 101.0 10.4 85 159-251 2-89 (90)
75 2d90_A PDZ domain containing p 99.4 1.5E-12 5.3E-17 103.7 10.5 86 159-254 6-92 (102)
76 1qav_A Alpha-1 syntrophin (res 99.4 1E-12 3.5E-17 102.2 9.1 83 257-349 6-89 (90)
77 1d5g_A Human phosphatase HPTP1 99.4 4E-12 1.4E-16 100.0 12.7 86 258-350 8-93 (96)
78 3i4w_A Disks large homolog 4; 99.4 2.6E-12 9E-17 102.7 11.8 84 159-251 11-95 (104)
79 2fne_A Multiple PDZ domain pro 99.4 1.2E-12 4E-17 107.0 9.8 89 159-252 25-114 (117)
80 1ujd_A KIAA0559 protein; PDZ d 99.4 3.1E-12 1.1E-16 104.5 12.4 92 159-253 12-111 (117)
81 2d92_A INAD-like protein; PDZ 99.4 3.3E-12 1.1E-16 102.9 12.3 90 159-252 15-106 (108)
82 2la8_A Inactivation-NO-after-p 99.4 2.3E-12 7.9E-17 103.3 11.3 81 258-350 5-85 (106)
83 1wi4_A Synip, syntaxin binding 99.4 1.5E-12 5.2E-17 104.9 10.3 86 256-350 16-105 (109)
84 2jik_A Synaptojanin-2 binding 99.4 2.6E-12 9.1E-17 102.1 11.5 89 257-350 9-97 (101)
85 2dlu_A INAD-like protein; PDZ 99.4 3.7E-12 1.3E-16 103.1 12.5 85 159-253 15-100 (111)
86 1n7t_A 99-MER peptide of densi 99.4 1.9E-12 6.5E-17 103.3 10.6 91 159-251 11-101 (103)
87 4e34_A Golgi-associated PDZ an 99.4 1.2E-12 4.2E-17 101.0 9.1 82 257-348 4-86 (87)
88 3i4w_A Disks large homolog 4; 99.4 2.9E-12 1E-16 102.4 11.6 87 252-349 8-94 (104)
89 2d92_A INAD-like protein; PDZ 99.4 1.5E-12 5E-17 104.9 9.9 88 257-350 17-105 (108)
90 2vwr_A Ligand of NUMB protein 99.4 2.4E-12 8.2E-17 101.1 10.8 83 258-350 6-89 (95)
91 1um1_A KIAA1849 protein, RSGI 99.4 5.4E-12 1.9E-16 101.9 13.2 89 159-252 8-97 (110)
92 2vsp_A PDZ domain-containing p 99.4 8.2E-13 2.8E-17 102.9 8.0 85 159-253 3-88 (91)
93 2pa1_A PDZ and LIM domain prot 99.4 3.8E-12 1.3E-16 98.2 11.7 82 161-251 4-85 (87)
94 2f5y_A Regulator of G-protein 99.4 4.2E-12 1.4E-16 98.9 12.0 81 159-252 3-84 (91)
95 3axa_A Afadin, nectin-3, prote 99.4 4.1E-12 1.4E-16 101.9 12.3 90 159-253 11-100 (106)
96 2w4f_A Protein LAP4; structura 99.4 6.9E-12 2.4E-16 98.8 13.4 92 159-253 3-95 (97)
97 2he4_A Na(+)/H(+) exchange reg 99.4 2.8E-12 9.6E-17 99.6 10.9 81 258-350 7-87 (90)
98 1wfg_A Regulating synaptic mem 99.4 8.2E-13 2.8E-17 110.2 8.4 85 260-350 41-127 (131)
99 4fln_A Protease DO-like 2, chl 99.4 3.2E-12 1.1E-16 130.0 14.4 174 169-348 253-471 (539)
100 2g5m_B Neurabin-2; spinophilin 99.4 2.1E-12 7.3E-17 104.9 10.6 91 158-253 3-97 (113)
101 1ueq_A Membrane associated gua 99.4 9.6E-12 3.3E-16 102.6 14.7 87 158-252 18-107 (123)
102 1q7x_A PDZ2B domain of PTP-BAS 99.4 2.7E-12 9.3E-17 103.4 11.2 90 159-253 9-104 (108)
103 2q3g_A PDZ and LIM domain prot 99.4 1.4E-12 4.8E-17 101.1 9.1 77 264-350 10-86 (89)
104 1ufx_A KIAA1526 protein; PDZ d 99.4 2.5E-12 8.5E-17 102.5 10.7 81 262-350 12-97 (103)
105 1ujd_A KIAA0559 protein; PDZ d 99.4 1.5E-12 5.2E-17 106.4 9.7 81 266-350 29-109 (117)
106 3o46_A Maguk P55 subfamily mem 99.4 3.9E-12 1.3E-16 99.5 11.6 85 159-252 4-89 (93)
107 2iwo_A Multiple PDZ domain pro 99.4 1.6E-12 5.4E-17 106.8 9.7 89 159-253 24-115 (120)
108 3gge_A PDZ domain-containing p 99.4 4.4E-12 1.5E-16 98.0 11.6 82 159-250 5-89 (95)
109 2ehr_A INAD-like protein; PDZ 99.4 1E-11 3.5E-16 101.5 14.6 95 159-253 15-112 (117)
110 1x5q_A LAP4 protein; PDZ domai 99.4 1.7E-11 5.9E-16 98.9 15.8 92 159-253 15-107 (110)
111 1i16_A Interleukin 16, LCF; cy 99.4 4.4E-12 1.5E-16 105.7 12.6 90 157-252 27-119 (130)
112 1uep_A Membrane associated gua 99.4 2.4E-12 8.3E-17 102.7 10.5 78 264-350 17-96 (103)
113 1qav_A Alpha-1 syntrophin (res 99.4 2.9E-12 1E-16 99.5 10.7 83 159-250 4-89 (90)
114 2eeg_A PDZ and LIM domain prot 99.4 2.1E-12 7.2E-17 101.2 9.9 85 159-252 8-92 (94)
115 2pa1_A PDZ and LIM domain prot 99.4 1.9E-12 6.3E-17 100.0 9.5 82 259-350 4-85 (87)
116 3hpk_A Protein interacting wit 99.4 2.7E-12 9.3E-17 106.2 11.0 83 258-349 22-104 (125)
117 2r4h_A Membrane-associated gua 99.4 4.6E-12 1.6E-16 102.7 12.1 85 159-251 24-109 (112)
118 2ego_A General receptor for ph 99.4 2.4E-12 8.1E-17 101.4 10.1 89 257-349 6-95 (96)
119 1wi2_A Riken cDNA 2700099C19; 99.4 4.5E-12 1.6E-16 101.3 11.9 85 159-253 15-101 (104)
120 2i04_A Membrane-associated gua 99.4 6.7E-12 2.3E-16 96.4 12.4 80 162-249 3-85 (85)
121 1ueq_A Membrane associated gua 99.4 1E-11 3.5E-16 102.4 14.3 79 264-351 27-107 (123)
122 1x6d_A Interleukin-16; PDZ dom 99.4 3.1E-12 1.1E-16 104.9 11.1 88 258-353 18-106 (119)
123 1rgw_A ZAsp protein; PDZ, cyph 99.4 2.7E-12 9.2E-17 98.6 10.0 75 265-349 9-83 (85)
124 3r68_A Na(+)/H(+) exchange reg 99.4 2.9E-12 1E-16 100.6 10.4 85 159-253 5-90 (95)
125 2eno_A Synaptojanin-2-binding 99.4 4E-12 1.4E-16 104.4 11.6 91 159-252 17-108 (120)
126 1ihj_A INAD; intermolecular di 99.4 2.4E-12 8.1E-17 101.8 9.9 89 258-349 8-96 (98)
127 1ihj_A INAD; intermolecular di 99.4 4.5E-12 1.5E-16 100.1 11.5 91 159-251 5-97 (98)
128 1nf3_C PAR-6B; semi-CRIB motif 99.4 1.4E-12 4.7E-17 108.5 8.9 94 159-252 29-126 (128)
129 1n7e_A AMPA receptor interacti 99.4 6E-12 2.1E-16 99.2 12.2 80 263-351 12-91 (97)
130 1wi2_A Riken cDNA 2700099C19; 99.4 3.8E-12 1.3E-16 101.7 11.1 83 257-350 17-99 (104)
131 2dkr_A LIN-7 homolog B; LIN-7B 99.4 3.5E-12 1.2E-16 99.7 10.7 85 160-252 6-91 (93)
132 3egg_C Spinophilin; PP1, serin 99.4 4.5E-12 1.5E-16 110.3 12.4 89 157-250 78-170 (170)
133 1i16_A Interleukin 16, LCF; cy 99.4 2.2E-12 7.4E-17 107.5 10.0 86 258-350 32-118 (130)
134 2qkv_A Inactivation-NO-after-p 99.4 3.7E-12 1.3E-16 100.2 10.7 81 258-350 11-91 (96)
135 2f5y_A Regulator of G-protein 99.4 4.6E-12 1.6E-16 98.7 11.1 78 259-351 7-84 (91)
136 2eno_A Synaptojanin-2-binding 99.4 5.6E-12 1.9E-16 103.5 12.0 89 258-351 20-108 (120)
137 2uzc_A Human pdlim5, PDZ and L 99.4 3.1E-12 1E-16 99.0 9.8 76 264-349 10-85 (88)
138 3e17_A Tight junction protein 99.4 2.6E-12 9E-17 99.3 9.4 71 265-350 11-81 (88)
139 3l4f_D SH3 and multiple ankyri 99.4 8.8E-12 3E-16 104.0 13.3 93 159-252 27-125 (132)
140 2daz_A INAD-like protein; PDZ 99.4 5.1E-12 1.7E-16 104.4 11.7 87 159-252 25-112 (124)
141 2jre_A C60-1 PDZ domain peptid 99.4 6.8E-12 2.3E-16 101.0 12.2 94 157-253 10-106 (108)
142 2e7k_A Maguk P55 subfamily mem 99.4 3.1E-12 1.1E-16 99.6 9.7 81 257-350 8-88 (91)
143 2dlu_A INAD-like protein; PDZ 99.4 4.5E-12 1.6E-16 102.6 11.1 77 264-351 23-99 (111)
144 1uew_A Membrane associated gua 99.4 9.5E-12 3.2E-16 101.2 13.0 91 257-351 12-104 (114)
145 1g9o_A NHE-RF; PDZ domain, com 99.4 7.6E-12 2.6E-16 97.4 11.9 81 258-350 6-86 (91)
146 3egg_C Spinophilin; PP1, serin 99.4 3.2E-12 1.1E-16 111.2 10.8 81 266-349 90-170 (170)
147 2dkr_A LIN-7 homolog B; LIN-7B 99.4 6.9E-12 2.4E-16 98.0 11.7 84 257-350 7-90 (93)
148 1wg6_A Hypothetical protein (r 99.4 1.1E-12 3.9E-17 108.8 7.5 83 264-351 34-123 (127)
149 2o2t_A Multiple PDZ domain pro 99.4 1.6E-12 5.6E-17 106.3 8.4 88 258-351 23-111 (117)
150 2fne_A Multiple PDZ domain pro 99.4 1.4E-12 4.7E-17 106.6 7.9 86 258-350 28-113 (117)
151 4e34_A Golgi-associated PDZ an 99.4 3.6E-12 1.2E-16 98.3 9.9 81 160-249 3-86 (87)
152 3axa_A Afadin, nectin-3, prote 99.4 4.1E-12 1.4E-16 101.9 10.4 81 264-350 18-98 (106)
153 2i04_A Membrane-associated gua 99.3 5.7E-12 2E-16 96.7 10.8 74 266-348 10-85 (85)
154 1n7t_A 99-MER peptide of densi 99.3 4.9E-12 1.7E-16 100.9 10.8 82 266-350 20-101 (103)
155 1wha_A KIAA0147 protein, scrib 99.3 8.7E-12 3E-16 99.8 12.2 83 265-350 16-98 (105)
156 2yt7_A Amyloid beta A4 precurs 99.3 5.8E-12 2E-16 100.1 11.0 90 254-350 8-99 (101)
157 1ufx_A KIAA1526 protein; PDZ d 99.3 4.8E-12 1.6E-16 100.9 10.5 86 160-252 7-98 (103)
158 2fcf_A Multiple PDZ domain pro 99.3 4.8E-12 1.6E-16 100.9 10.5 93 258-350 7-99 (103)
159 1uf1_A KIAA1526 protein; PDZ d 99.3 9.1E-12 3.1E-16 103.5 12.6 101 239-353 7-107 (128)
160 1nf3_C PAR-6B; semi-CRIB motif 99.3 1.5E-12 5.1E-17 108.2 7.8 97 254-350 28-125 (128)
161 1uew_A Membrane associated gua 99.3 9.6E-12 3.3E-16 101.1 12.4 94 158-253 9-105 (114)
162 2fcf_A Multiple PDZ domain pro 99.3 1.2E-11 4.1E-16 98.6 12.7 94 159-252 4-100 (103)
163 1q3o_A Shank1; PDZ, GKAP, pept 99.3 4.8E-12 1.6E-16 102.1 10.4 92 258-350 10-104 (109)
164 3qe1_A Sorting nexin-27, G pro 99.3 1.2E-11 4.2E-16 99.3 12.8 94 159-253 6-104 (107)
165 3nfk_A Tyrosine-protein phosph 99.3 2.9E-12 1E-16 103.0 9.0 84 257-349 19-107 (107)
166 2q9v_A Membrane-associated gua 99.3 3.8E-12 1.3E-16 98.9 9.4 82 258-349 5-88 (90)
167 2h2b_A Tight junction protein 99.3 1.7E-11 5.9E-16 98.4 13.5 93 157-253 5-99 (107)
168 2djt_A Unnamed protein product 99.3 7.2E-12 2.4E-16 100.1 11.2 89 159-253 11-100 (104)
169 2dc2_A GOPC, golgi associated 99.3 5.4E-12 1.8E-16 100.7 10.4 86 159-253 9-97 (103)
170 1wf8_A Neurabin-I; PDZ domain, 99.3 4.5E-12 1.5E-16 101.9 10.0 82 264-351 17-101 (107)
171 3ngh_A PDZ domain-containing p 99.3 5.4E-12 1.9E-16 101.2 10.4 82 258-350 4-85 (106)
172 1um1_A KIAA1849 protein, RSGI 99.3 7.7E-12 2.6E-16 101.0 11.4 86 258-350 11-96 (110)
173 1wfg_A Regulating synaptic mem 99.3 8.6E-12 3E-16 104.0 12.0 90 159-253 27-129 (131)
174 2iwq_A Multiple PDZ domain pro 99.3 6.1E-12 2.1E-16 103.7 10.9 94 257-350 26-119 (123)
175 1q7x_A PDZ2B domain of PTP-BAS 99.3 9E-12 3.1E-16 100.3 11.7 81 265-351 18-103 (108)
176 2opg_A Multiple PDZ domain pro 99.3 1.2E-11 4E-16 97.7 12.1 79 265-351 13-91 (98)
177 2kv8_A RGS12, regulator of G-p 99.3 3E-12 1E-16 97.8 8.4 76 259-349 6-81 (83)
178 2vsp_A PDZ domain-containing p 99.3 3.6E-12 1.2E-16 99.2 8.8 81 258-350 6-86 (91)
179 1kwa_A Hcask/LIN-2 protein; PD 99.3 7.9E-12 2.7E-16 96.6 10.7 82 160-252 2-86 (88)
180 2qkv_A Inactivation-NO-after-p 99.3 1.1E-11 3.8E-16 97.5 11.6 85 157-252 6-92 (96)
181 2db5_A INAD-like protein; PDZ 99.3 3.9E-12 1.3E-16 105.7 9.5 90 159-253 25-117 (128)
182 2ego_A General receptor for ph 99.3 1.2E-11 4.1E-16 97.3 11.7 90 159-250 4-95 (96)
183 2dls_A PDZ-rhogef, RHO guanine 99.3 1.6E-11 5.6E-16 95.9 12.3 81 159-253 8-89 (93)
184 2eeh_A PDZ domain-containing p 99.3 1.6E-11 5.5E-16 97.3 12.3 86 159-254 10-97 (100)
185 2la8_A Inactivation-NO-after-p 99.3 1E-11 3.5E-16 99.5 11.3 83 159-252 2-86 (106)
186 3hpk_A Protein interacting wit 99.3 1.5E-11 5.1E-16 101.7 12.6 85 159-251 19-105 (125)
187 2cs5_A Tyrosine-protein phosph 99.3 3.3E-12 1.1E-16 104.7 8.5 85 257-351 17-107 (119)
188 2dmz_A INAD-like protein; PDZ 99.3 1.6E-11 5.6E-16 102.1 12.9 95 156-253 12-108 (129)
189 2dls_A PDZ-rhogef, RHO guanine 99.3 1.6E-11 5.4E-16 96.0 11.9 73 263-350 15-87 (93)
190 2jil_A GRIP1 protein, glutamat 99.3 8.9E-12 3.1E-16 98.2 10.5 82 265-351 12-93 (97)
191 2r4h_A Membrane-associated gua 99.3 1E-11 3.4E-16 100.7 11.0 82 258-349 27-108 (112)
192 1wg6_A Hypothetical protein (r 99.3 4.9E-12 1.7E-16 104.9 9.2 91 159-253 25-124 (127)
193 2ejy_A 55 kDa erythrocyte memb 99.3 1E-11 3.5E-16 97.6 10.5 81 160-250 13-95 (97)
194 2kpk_A Membrane-associated gua 99.3 1.4E-11 4.8E-16 102.5 12.0 86 159-252 18-106 (129)
195 2eei_A PDZ domain-containing p 99.3 3.8E-12 1.3E-16 102.1 8.2 86 159-254 8-94 (106)
196 2o2t_A Multiple PDZ domain pro 99.3 4.5E-12 1.5E-16 103.6 8.8 90 159-253 20-112 (117)
197 2daz_A INAD-like protein; PDZ 99.3 9.6E-12 3.3E-16 102.8 10.8 78 266-351 35-112 (124)
198 2kv8_A RGS12, regulator of G-p 99.3 3.4E-12 1.2E-16 97.6 7.5 80 159-251 2-82 (83)
199 2eeh_A PDZ domain-containing p 99.3 1.7E-11 5.8E-16 97.2 11.8 84 257-351 12-95 (100)
200 1uju_A Scribble; PDZ domain, c 99.3 5.1E-12 1.8E-16 102.2 8.9 94 160-253 10-106 (111)
201 2pkt_A PDZ and LIM domain prot 99.3 8.1E-12 2.8E-16 97.2 9.7 76 265-350 11-86 (91)
202 2v90_A PDZ domain-containing p 99.3 1.3E-11 4.5E-16 97.0 11.0 85 258-351 6-90 (96)
203 2jre_A C60-1 PDZ domain peptid 99.3 1.6E-11 5.6E-16 98.7 11.7 84 263-350 21-104 (108)
204 2iwq_A Multiple PDZ domain pro 99.3 2E-11 6.7E-16 100.6 12.3 94 159-252 24-120 (123)
205 2vsv_A Rhophilin-2; scaffold p 99.3 1.2E-11 4.1E-16 99.4 10.7 73 265-351 32-105 (109)
206 1wf7_A Enigma homologue protei 99.3 4.8E-12 1.6E-16 101.0 8.3 86 159-253 5-90 (103)
207 1x6d_A Interleukin-16; PDZ dom 99.3 1.7E-11 5.7E-16 100.5 11.7 88 159-253 15-105 (119)
208 3qe1_A Sorting nexin-27, G pro 99.3 1.6E-11 5.3E-16 98.7 11.3 92 258-351 9-103 (107)
209 2eeg_A PDZ and LIM domain prot 99.3 1.1E-11 3.7E-16 97.1 10.1 76 265-350 16-91 (94)
210 2kpk_A Membrane-associated gua 99.3 1.3E-11 4.4E-16 102.7 11.1 78 265-351 27-106 (129)
211 3r68_A Na(+)/H(+) exchange reg 99.3 8.8E-12 3E-16 97.8 9.6 81 258-350 8-88 (95)
212 1va8_A Maguk P55 subfamily mem 99.3 3.3E-11 1.1E-15 97.8 13.3 83 159-253 25-110 (113)
213 1v62_A KIAA1719 protein; struc 99.3 1.5E-11 5.1E-16 100.4 11.2 87 159-252 15-103 (117)
214 1v6b_A Harmonin isoform A1; st 99.3 1.3E-11 4.4E-16 101.0 10.7 87 159-253 18-109 (118)
215 2koj_A Partitioning defective 99.3 4.1E-11 1.4E-15 96.9 13.6 91 158-253 10-103 (111)
216 2d90_A PDZ domain containing p 99.3 1.4E-11 4.9E-16 98.0 10.7 82 258-351 9-90 (102)
217 1vb7_A PDZ and LIM domain 2; P 99.3 7.6E-12 2.6E-16 98.0 8.9 84 161-253 8-91 (94)
218 1vb7_A PDZ and LIM domain 2; P 99.3 5.6E-12 1.9E-16 98.8 8.0 83 258-350 7-89 (94)
219 1va8_A Maguk P55 subfamily mem 99.3 1.4E-11 4.8E-16 100.0 10.6 81 257-350 27-108 (113)
220 3nfk_A Tyrosine-protein phosph 99.3 1.3E-11 4.3E-16 99.2 10.2 84 159-250 17-107 (107)
221 2dmz_A INAD-like protein; PDZ 99.3 1.7E-11 5.6E-16 102.1 11.2 90 258-351 18-107 (129)
222 1q3o_A Shank1; PDZ, GKAP, pept 99.3 4.4E-11 1.5E-15 96.3 13.4 92 159-251 7-104 (109)
223 2csj_A TJP2 protein; PDZ domai 99.3 1.4E-11 4.6E-16 100.7 10.4 88 258-350 17-104 (117)
224 2g5m_B Neurabin-2; spinophilin 99.3 1E-11 3.6E-16 100.8 9.5 84 265-351 13-96 (113)
225 1ky9_A Protease DO, DEGP, HTRA 99.3 5.4E-13 1.8E-17 134.3 2.1 150 14-253 285-442 (448)
226 3khf_A Microtubule-associated 99.3 1.3E-11 4.5E-16 97.6 9.7 89 163-253 6-95 (99)
227 2w4f_A Protein LAP4; structura 99.3 3.4E-11 1.1E-15 94.8 12.0 83 264-350 11-93 (97)
228 1tp5_A Presynaptic density pro 99.3 2.3E-11 7.8E-16 99.7 11.4 84 159-251 14-98 (119)
229 1v6b_A Harmonin isoform A1; st 99.3 1E-11 3.5E-16 101.6 9.2 76 267-350 28-107 (118)
230 2csj_A TJP2 protein; PDZ domai 99.3 2E-11 6.7E-16 99.8 10.8 92 157-252 12-105 (117)
231 1wf7_A Enigma homologue protei 99.3 1E-11 3.6E-16 99.0 8.9 78 265-352 13-90 (103)
232 3bpu_A Membrane-associated gua 99.3 2.7E-11 9.4E-16 93.5 11.1 81 159-251 3-86 (88)
233 2djt_A Unnamed protein product 99.3 2.8E-11 9.5E-16 96.6 11.2 85 258-350 14-98 (104)
234 3soe_A Membrane-associated gua 99.3 2.5E-11 8.4E-16 97.5 10.7 82 258-355 15-98 (113)
235 3k1r_A Harmonin; protein-prote 99.3 2.2E-12 7.7E-17 115.0 5.0 91 249-350 78-168 (192)
236 2eei_A PDZ domain-containing p 99.3 1.8E-11 6.1E-16 98.2 9.7 84 257-352 10-93 (106)
237 3soe_A Membrane-associated gua 99.3 4E-11 1.4E-15 96.3 11.6 82 159-254 12-96 (113)
238 2iwn_A Multiple PDZ domain pro 99.3 4.2E-11 1.4E-15 94.2 11.6 89 159-251 4-93 (97)
239 1x5q_A LAP4 protein; PDZ domai 99.3 5.4E-11 1.9E-15 96.0 12.5 83 264-350 23-105 (110)
240 3ngh_A PDZ domain-containing p 99.3 2E-11 6.9E-16 97.8 9.9 82 161-252 3-86 (106)
241 1whd_A RGS3, regulator of G-pr 99.3 1.9E-11 6.4E-16 96.9 9.4 73 264-350 23-95 (100)
242 2jxo_A Ezrin-radixin-moesin-bi 99.3 2.9E-11 1E-15 95.4 10.5 83 159-251 9-93 (98)
243 2edz_A PDZ domain-containing p 99.3 2E-11 6.7E-16 99.3 9.7 83 257-350 15-97 (114)
244 2vsv_A Rhophilin-2; scaffold p 99.3 3.9E-11 1.3E-15 96.4 11.2 80 160-252 24-105 (109)
245 1y7n_A Amyloid beta A4 precurs 99.3 3.4E-11 1.2E-15 93.3 10.5 71 262-349 19-89 (90)
246 3sfj_A TAX1-binding protein 3; 99.3 3E-11 1E-15 96.4 10.5 82 267-349 19-104 (104)
247 3e17_A Tight junction protein 99.3 4.2E-11 1.4E-15 92.5 10.8 70 170-253 14-83 (88)
248 2koj_A Partitioning defective 99.3 4.7E-11 1.6E-15 96.5 11.6 82 263-350 18-101 (111)
249 2cs5_A Tyrosine-protein phosph 99.3 1.9E-11 6.5E-16 100.2 9.3 85 159-252 15-107 (119)
250 2yt7_A Amyloid beta A4 precurs 99.3 7.8E-11 2.7E-15 93.5 12.5 87 159-251 9-99 (101)
251 1z87_A Alpha-1-syntrophin; pro 99.2 9.1E-12 3.1E-16 115.5 8.0 87 257-353 79-166 (263)
252 3khf_A Microtubule-associated 99.2 2E-11 6.7E-16 96.6 8.8 84 264-350 10-93 (99)
253 2dm8_A INAD-like protein; PDZ 99.2 1.9E-11 6.5E-16 99.7 9.0 87 160-253 18-105 (116)
254 1wfv_A Membrane associated gua 99.2 6.1E-12 2.1E-16 100.3 5.9 87 159-253 11-98 (103)
255 2edp_A Fragment, shroom family 99.2 8.6E-12 2.9E-16 98.9 6.7 85 255-350 9-94 (100)
256 2gzv_A PRKCA-binding protein; 99.2 3.9E-11 1.3E-15 97.4 10.7 84 257-349 26-109 (114)
257 1v5q_A GRIP1 homolog, glutamat 99.2 4E-11 1.4E-15 98.7 10.9 89 258-351 18-108 (122)
258 2dm8_A INAD-like protein; PDZ 99.2 3.9E-11 1.3E-15 97.8 10.7 80 264-351 25-104 (116)
259 3kzd_A TIAM-1, T-lymphoma inva 99.2 8.4E-11 2.9E-15 91.2 11.7 83 159-251 6-92 (94)
260 2kom_A Partitioning defective 99.2 1.2E-10 4.2E-15 95.5 13.4 89 158-251 29-120 (121)
261 2jxo_A Ezrin-radixin-moesin-bi 99.2 6.1E-11 2.1E-15 93.5 11.1 77 262-349 15-92 (98)
262 2h2b_A Tight junction protein 99.2 5.6E-11 1.9E-15 95.4 11.0 88 258-350 10-97 (107)
263 1whd_A RGS3, regulator of G-pr 99.2 2.6E-11 9E-16 96.1 8.9 84 157-253 13-97 (100)
264 2edp_A Fragment, shroom family 99.2 1.7E-11 6E-16 97.1 7.8 84 159-252 11-95 (100)
265 2e7k_A Maguk P55 subfamily mem 99.2 3.5E-11 1.2E-15 93.6 9.3 79 161-251 8-88 (91)
266 2kom_A Partitioning defective 99.2 1E-10 3.4E-15 96.1 12.5 82 262-349 36-119 (121)
267 2qbw_A PDZ-fibronectin fusion 99.2 4.4E-11 1.5E-15 106.8 11.1 79 267-348 2-80 (195)
268 1uit_A Human discs large 5 pro 99.2 7.7E-11 2.6E-15 96.2 11.6 84 159-253 19-103 (117)
269 3tsv_A Tight junction protein 99.2 5.6E-11 1.9E-15 98.0 10.7 75 264-350 36-112 (124)
270 1tp5_A Presynaptic density pro 99.2 6.6E-11 2.3E-15 96.9 11.1 83 257-350 16-98 (119)
271 1um7_A Synapse-associated prot 99.2 2.9E-11 9.8E-16 98.1 8.7 84 159-251 15-99 (113)
272 1wif_A RSGI RUH-020, riken cDN 99.2 1.9E-11 6.6E-16 100.6 7.5 76 263-350 34-111 (126)
273 2edv_A FERM and PDZ domain-con 99.2 1.8E-11 6.1E-16 96.3 6.9 77 259-350 12-89 (96)
274 1v5q_A GRIP1 homolog, glutamat 99.2 8.6E-11 2.9E-15 96.7 11.3 92 158-253 14-109 (122)
275 1uez_A KIAA1526 protein; PDZ d 99.2 3.9E-11 1.3E-15 95.2 8.8 87 253-350 6-93 (101)
276 2iwn_A Multiple PDZ domain pro 99.2 1.1E-10 3.8E-15 91.7 11.1 81 264-349 12-92 (97)
277 2yuy_A RHO GTPase activating p 99.2 2.3E-11 8E-16 100.7 7.5 61 289-350 60-120 (126)
278 2gzv_A PRKCA-binding protein; 99.2 1.5E-10 5.1E-15 93.9 12.1 84 159-250 24-109 (114)
279 1wfv_A Membrane associated gua 99.2 2.8E-11 9.7E-16 96.4 7.5 77 265-350 20-96 (103)
280 2vz5_A TAX1-binding protein 3; 99.2 1.7E-10 5.9E-15 97.0 12.6 94 159-253 23-126 (139)
281 2z17_A Pleckstrin homology SEC 99.2 5.6E-11 1.9E-15 94.9 9.1 86 258-346 18-103 (104)
282 1v5l_A PDZ and LIM domain 3; a 99.2 1.3E-11 4.5E-16 98.4 5.4 83 162-253 8-90 (103)
283 1uez_A KIAA1526 protein; PDZ d 99.2 7.3E-11 2.5E-15 93.7 9.7 85 159-253 8-95 (101)
284 1uit_A Human discs large 5 pro 99.2 1.7E-10 5.7E-15 94.2 12.0 81 258-351 22-102 (117)
285 1v5l_A PDZ and LIM domain 3; a 99.2 1.6E-11 5.4E-16 97.9 5.7 78 264-351 12-89 (103)
286 3tsv_A Tight junction protein 99.2 1.3E-10 4.5E-15 95.8 11.3 80 161-251 31-112 (124)
287 3sfj_A TAX1-binding protein 3; 99.2 2.2E-10 7.7E-15 91.3 12.3 80 170-250 20-104 (104)
288 1wif_A RSGI RUH-020, riken cDN 99.2 1.2E-10 4.2E-15 95.8 10.9 81 159-250 27-110 (126)
289 2yuy_A RHO GTPase activating p 99.2 1.8E-11 6.3E-16 101.3 6.0 93 160-253 9-122 (126)
290 1qau_A Neuronal nitric oxide s 99.2 5E-10 1.7E-14 90.5 14.4 84 160-253 2-89 (112)
291 1ujv_A Membrane associated gua 99.2 2.4E-10 8.1E-15 89.8 12.0 81 159-253 10-93 (96)
292 2edz_A PDZ domain-containing p 99.2 8.9E-11 3.1E-15 95.3 9.8 84 159-252 13-98 (114)
293 1z87_A Alpha-1-syntrophin; pro 99.2 5.5E-11 1.9E-15 110.3 9.5 87 159-254 77-166 (263)
294 3k1r_A Harmonin; protein-prote 99.2 1E-10 3.6E-15 104.1 11.0 84 159-252 84-169 (192)
295 1um7_A Synapse-associated prot 99.2 8E-11 2.7E-15 95.4 9.3 82 258-350 18-99 (113)
296 3bpu_A Membrane-associated gua 99.2 1.8E-10 6.1E-15 88.9 10.5 78 258-349 6-85 (88)
297 1x5n_A Harmonin; PDZ domain, u 99.2 1.4E-10 4.8E-15 94.1 9.9 82 257-349 17-98 (114)
298 1vae_A Rhophilin 2, rhophilin, 99.2 5.9E-11 2E-15 95.8 7.3 78 259-351 19-97 (111)
299 2d8i_A T-cell lymphoma invasio 99.1 1.1E-10 3.7E-15 94.6 8.8 85 159-253 15-103 (114)
300 1y7n_A Amyloid beta A4 precurs 99.1 3.7E-10 1.3E-14 87.4 11.4 65 170-250 25-89 (90)
301 3kzd_A TIAM-1, T-lymphoma inva 99.1 2.2E-10 7.6E-15 88.8 9.8 71 267-348 20-90 (94)
302 2edv_A FERM and PDZ domain-con 99.1 4.9E-11 1.7E-15 93.7 6.0 80 159-252 8-90 (96)
303 2rcz_A Tight junction protein 99.1 2.6E-10 8.7E-15 86.4 9.8 72 263-349 9-80 (81)
304 1qau_A Neuronal nitric oxide s 99.1 2.6E-10 9E-15 92.2 10.5 84 258-352 4-89 (112)
305 3qik_A Phosphatidylinositol 3, 99.1 3.8E-10 1.3E-14 88.0 10.8 80 159-250 17-100 (101)
306 2qbw_A PDZ-fibronectin fusion 99.1 3.4E-10 1.1E-14 101.0 12.0 79 169-249 2-80 (195)
307 2lob_A Golgi-associated PDZ an 98.7 5.1E-12 1.7E-16 102.3 0.0 80 258-347 30-110 (112)
308 3qik_A Phosphatidylinositol 3, 99.1 2E-10 6.7E-15 89.6 8.9 71 265-348 26-99 (101)
309 1x5n_A Harmonin; PDZ domain, u 99.1 3.7E-10 1.3E-14 91.6 10.7 80 161-250 17-98 (114)
310 1ujv_A Membrane associated gua 99.1 7.2E-10 2.5E-14 87.0 11.9 71 265-350 19-91 (96)
311 1uf1_A KIAA1526 protein; PDZ d 99.1 9.9E-10 3.4E-14 91.1 13.3 83 161-253 22-106 (128)
312 2z17_A Pleckstrin homology SEC 99.1 3.4E-10 1.2E-14 90.3 10.0 86 160-247 16-103 (104)
313 2kjd_A Sodium/hydrogen exchang 99.1 4.9E-10 1.7E-14 92.9 11.3 84 159-252 9-94 (128)
314 2eaq_A LIM domain only protein 99.1 4E-10 1.4E-14 87.3 10.1 70 170-251 18-89 (90)
315 3cyy_A Tight junction protein 99.1 4.7E-10 1.6E-14 87.2 10.3 60 291-350 24-83 (92)
316 2vz5_A TAX1-binding protein 3; 99.1 3.7E-10 1.3E-14 95.0 10.2 84 267-351 38-125 (139)
317 2eaq_A LIM domain only protein 99.1 2.4E-10 8.3E-15 88.5 8.5 70 267-349 17-88 (90)
318 2kjd_A Sodium/hydrogen exchang 99.1 5.7E-10 1.9E-14 92.5 10.9 77 263-350 16-93 (128)
319 2d8i_A T-cell lymphoma invasio 99.1 1.7E-10 5.9E-15 93.4 7.4 82 258-350 18-101 (114)
320 4fln_A Protease DO-like 2, chl 99.1 2.8E-09 9.4E-14 108.5 18.0 55 191-248 415-470 (539)
321 3cyy_A Tight junction protein 99.1 1.2E-09 4E-14 85.0 11.8 70 170-253 16-85 (92)
322 2rcz_A Tight junction protein 99.1 5E-10 1.7E-14 84.7 9.4 67 170-250 14-80 (81)
323 1wh1_A KIAA1095 protein; PDZ d 99.1 8.9E-10 3E-14 90.8 11.0 87 159-253 19-109 (124)
324 2lob_A Golgi-associated PDZ an 98.6 1.9E-11 6.4E-16 98.9 0.0 81 159-248 27-110 (112)
325 1b8q_A Protein (neuronal nitri 99.0 1E-09 3.4E-14 90.9 9.8 84 257-351 10-95 (127)
326 3shw_A Tight junction protein 99.0 8.8E-10 3E-14 110.3 10.4 81 160-251 2-84 (468)
327 1vae_A Rhophilin 2, rhophilin, 99.0 1.8E-10 6E-15 93.0 4.2 77 161-250 17-95 (111)
328 3tsz_A Tight junction protein 99.0 1.5E-09 5E-14 107.1 11.0 82 159-251 9-92 (391)
329 1b8q_A Protein (neuronal nitri 99.0 9E-10 3.1E-14 91.2 7.9 85 159-253 8-96 (127)
330 3shw_A Tight junction protein 99.0 9.8E-10 3.3E-14 109.9 9.5 72 266-349 10-83 (468)
331 2yub_A LIMK-2, LIM domain kina 99.0 2.2E-09 7.4E-14 87.5 9.1 64 289-353 43-108 (118)
332 3tsz_A Tight junction protein 99.0 1.5E-09 5.2E-14 107.0 9.7 71 267-349 19-91 (391)
333 2krg_A Na(+)/H(+) exchange reg 98.9 6.5E-10 2.2E-14 100.3 6.1 83 159-251 9-93 (216)
334 1wh1_A KIAA1095 protein; PDZ d 98.9 5.1E-09 1.7E-13 86.2 10.4 76 267-351 32-108 (124)
335 2krg_A Na(+)/H(+) exchange reg 98.9 1.5E-09 5.2E-14 98.0 7.1 75 264-349 17-92 (216)
336 2yub_A LIMK-2, LIM domain kina 98.9 1.2E-08 4.2E-13 83.0 11.4 62 191-253 44-107 (118)
337 3i18_A LMO2051 protein; alpha- 98.9 2E-08 6.7E-13 79.3 10.8 60 190-253 6-67 (100)
338 2l97_A HTRA, putative serine p 98.8 5.6E-09 1.9E-13 87.1 7.8 81 169-253 29-117 (134)
339 2p3w_A Probable serine proteas 98.8 2.3E-09 7.9E-14 86.6 3.9 79 170-252 7-92 (112)
340 2kjp_A Uncharacterized protein 98.8 3.7E-09 1.3E-13 81.9 4.4 58 192-253 2-61 (91)
341 2pzd_A Serine protease HTRA2; 98.8 6.5E-09 2.2E-13 84.0 5.5 81 169-253 6-93 (113)
342 2kjp_A Uncharacterized protein 98.6 1.7E-08 5.8E-13 78.1 4.1 57 291-351 2-60 (91)
343 1te0_A Protease DEGS; two doma 98.6 2.2E-07 7.4E-12 89.3 12.0 82 169-253 221-305 (318)
344 3id1_A Regulator of sigma E pr 98.6 1.5E-07 5E-12 73.5 8.3 57 193-252 4-62 (95)
345 2pzd_A Serine protease HTRA2; 98.6 1.3E-07 4.4E-12 76.3 8.3 59 289-351 34-92 (113)
346 3i18_A LMO2051 protein; alpha- 98.6 1.7E-07 5.8E-12 73.8 8.6 59 289-351 6-66 (100)
347 2kl1_A YLBL protein; structure 98.6 6.5E-08 2.2E-12 75.4 6.0 60 289-352 4-65 (94)
348 3stj_A Protease DEGQ; serine p 98.6 9.2E-08 3.2E-12 92.8 8.3 81 170-253 241-324 (345)
349 2i6v_A General secretion pathw 98.6 1.1E-07 3.7E-12 73.0 6.8 58 192-252 20-79 (87)
350 2kl1_A YLBL protein; structure 98.6 7.9E-08 2.7E-12 74.9 5.9 59 191-253 5-65 (94)
351 2l97_A HTRA, putative serine p 98.5 2.3E-07 7.8E-12 77.3 8.6 58 290-351 57-116 (134)
352 3id1_A Regulator of sigma E pr 98.5 2.4E-07 8.1E-12 72.3 7.7 56 292-350 4-61 (95)
353 2i6v_A General secretion pathw 98.5 1.6E-07 5.5E-12 72.0 6.5 57 291-350 20-78 (87)
354 2zpm_A Regulator of sigma E pr 98.5 2.1E-07 7E-12 71.9 6.6 59 192-253 5-64 (91)
355 2p3w_A Probable serine proteas 98.5 2.8E-07 9.7E-12 74.2 7.6 58 289-350 34-91 (112)
356 2zpm_A Regulator of sigma E pr 98.4 2.6E-07 8.8E-12 71.4 6.1 57 291-350 5-62 (91)
357 2i4s_A General secretion pathw 98.4 6.2E-07 2.1E-11 71.3 7.9 58 192-252 38-97 (105)
358 1lcy_A HTRA2 serine protease; 98.4 3.8E-07 1.3E-11 87.8 7.6 80 170-253 228-314 (325)
359 2i4s_A General secretion pathw 98.4 5.9E-07 2E-11 71.4 6.5 57 291-350 38-96 (105)
360 1te0_A Protease DEGS; two doma 98.4 1.5E-06 5.2E-11 83.4 10.4 60 289-351 243-304 (318)
361 1y8t_A Hypothetical protein RV 98.3 2.6E-06 8.9E-11 81.9 11.1 60 191-253 242-304 (324)
362 3stj_A Protease DEGQ; serine p 98.3 7.9E-07 2.7E-11 86.2 6.7 60 289-351 262-323 (345)
363 1fc6_A Photosystem II D1 prote 98.3 2.4E-06 8.2E-11 84.3 9.6 75 267-351 85-160 (388)
364 2hga_A Conserved protein MTH13 98.3 3.4E-06 1.2E-10 69.1 8.9 57 191-252 25-83 (125)
365 1fc6_A Photosystem II D1 prote 98.2 4.8E-06 1.6E-10 82.1 11.3 74 170-252 86-160 (388)
366 2hga_A Conserved protein MTH13 98.2 4.3E-06 1.5E-10 68.5 9.0 58 289-351 24-83 (125)
367 3qo6_A Protease DO-like 1, chl 98.2 3.2E-06 1.1E-10 82.1 9.2 77 170-253 234-323 (348)
368 1y8t_A Hypothetical protein RV 98.1 7.9E-06 2.7E-10 78.5 10.1 59 289-350 241-302 (324)
369 3num_A Serine protease HTRA1; 98.1 3.8E-07 1.3E-11 88.1 0.0 80 170-253 226-312 (332)
370 1lcy_A HTRA2 serine protease; 98.1 6.1E-06 2.1E-10 79.3 8.4 59 289-351 255-313 (325)
371 4fgm_A Aminopeptidase N family 98.1 5.9E-06 2E-10 85.7 8.7 58 192-253 497-556 (597)
372 3k50_A Putative S41 protease; 98.0 6.9E-06 2.4E-10 80.9 6.2 74 170-253 75-148 (403)
373 3k50_A Putative S41 protease; 98.0 5.3E-06 1.8E-10 81.8 5.0 57 291-351 91-147 (403)
374 3qo6_A Protease DO-like 1, chl 98.0 9.6E-06 3.3E-10 78.7 6.7 60 290-352 251-323 (348)
375 4fgm_A Aminopeptidase N family 97.9 1E-05 3.5E-10 83.9 7.0 59 290-352 496-556 (597)
376 3num_A Serine protease HTRA1; 97.7 4.2E-06 1.5E-10 80.7 0.0 59 289-351 253-311 (332)
377 1k32_A Tricorn protease; prote 96.9 0.0013 4.4E-08 73.0 8.1 58 290-350 748-815 (1045)
378 1k32_A Tricorn protease; prote 96.9 0.0029 9.8E-08 70.2 9.9 68 170-251 738-815 (1045)
379 1at0_A 17-hedgehog; developmen 46.4 44 0.0015 27.1 6.3 16 305-320 88-103 (145)
380 3dor_A Protein CT_858, CPAF; m 32.3 41 0.0014 34.0 4.6 29 291-324 97-125 (583)
381 3dor_A Protein CT_858, CPAF; m 27.5 71 0.0024 32.3 5.4 28 193-225 98-125 (583)
382 2j3t_D Trafficking protein par 25.5 61 0.0021 28.3 4.0 53 14-66 44-100 (219)
No 1
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=99.97 E-value=1.6e-29 Score=269.75 Aligned_cols=242 Identities=31% Similarity=0.484 Sum_probs=191.5
Q ss_pred ccccCcceeEEe------cCcccc-cCCCCEEEEECCeecCCCCHHHHHHHHhhcCCeEEEEEEeccccCccccccCCCC
Q psy4596 9 PWTGEQAGVILA------AGEVVI-HPVGMRLLEVNGMSLLGASHQEAVNTLRYSGHQISLTVCKGFERGDIERRASTSE 81 (439)
Q Consensus 9 ~~~~~~~Gi~vs------a~~~~g-L~~GD~Il~VNG~~v~~~~~~~~v~~l~~~~~~v~L~V~R~~~~~~~~~~~~~~~ 81 (439)
|+.....|++|+ +|..+| |++||+|++|||+++.+++|.+++.+|+.++..|+|+|.|.....
T Consensus 83 ~~~~~~~g~~V~~v~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~g~~v~l~v~R~~~~~---------- 152 (721)
T 2xkx_A 83 PHIGDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALKEAGSIVRLYVMRRKPPA---------- 152 (721)
T ss_pred cccCCCCCeEEEEeCCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHhhccccccceEEEeccccc----------
Confidence 344457899997 445556 999999999999999999999999999999999999998832000
Q ss_pred CCCCccccCCCCCcCCCcccccccCccceeeeccccCCCCCCCCCCCCcccccCCCCCcccccccCcCCCCCCCCCceeE
Q psy4596 82 GSRSVTQSMSSLDREDLDTDVFKQGQWSTVVTAHQRLDTGYGLPSNSTVAAHISSSLKPSILVTYNFFSPSVRSSSLFLQ 161 (439)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~ 161 (439)
....
T Consensus 153 ----------------------------------------------------------------------------~~~~ 156 (721)
T 2xkx_A 153 ----------------------------------------------------------------------------EKVM 156 (721)
T ss_pred ----------------------------------------------------------------------------ccce
Confidence 0113
Q ss_pred EEEEecCC-CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHhCCC
Q psy4596 162 DVVLPKSG-PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALLEPC 240 (439)
Q Consensus 162 ~v~l~~~~-~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~ 240 (439)
+|.|.+.. +|||++.++.+.... ....|++|..|.++|+|+++|+|++||+|++|||.++.+++|.+++..++..+
T Consensus 157 ~v~l~k~~~~lG~~i~~~~~~~~~---~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~ 233 (721)
T 2xkx_A 157 EIKLIKGPKGLGFSIAGGVGNQHI---PGDNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHEDAVAALKNTY 233 (721)
T ss_pred eeeeeeecCCCceeeccCCCcccc---CCCCceEEEEeCCCCchhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHHcCC
Confidence 35555543 799999887553211 12358999999999999999999999999999999999999999998888888
Q ss_pred CeEEEEEecCCCCCC-----------------------------------------------------------cceeee
Q psy4596 241 PEILLKIQHDPHPEG-----------------------------------------------------------FQEITL 261 (439)
Q Consensus 241 ~~v~l~v~r~~~~~~-----------------------------------------------------------~~~v~l 261 (439)
..+.|+|.|++.... ...+.+
T Consensus 234 ~~v~l~V~R~g~~~~~~~~~~p~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~v~l 313 (721)
T 2xkx_A 234 DVVYLKVAKPSNAYLSDSYAPPDITTSYSQHLDNEISHSSYLGTDYPTAMTPTSPRRYSPVAKDLLGEEDIPREPRRIVI 313 (721)
T ss_pred CeEEEEEEeCCcccccCCCCCCCcccCCCCCcccccCCcccccccccccCCCCCCcccCCcccccccccccccceEEEEE
Confidence 899999988764210 000111
Q ss_pred eeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCe
Q psy4596 262 IRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRYSGHQ 341 (439)
Q Consensus 262 ~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~ 341 (439)
......|||.+.++. ...|++|..|.++|+|+++|+|++||+|++|||++|.+++|++++++|++.+..
T Consensus 314 -~~~~~~lG~~i~~~~----------~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~~~~e~~~~l~~~~~~ 382 (721)
T 2xkx_A 314 -HRGSTGLGFNIVGGE----------DGEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQT 382 (721)
T ss_pred -EECCCCccEEEeccC----------CCCCeEEEEeCCCChHHhcCCCccCCEEEEECCEECCCCCHHHHHHHHHhcCCe
Confidence 122345788776542 134899999999999999999999999999999999999999999999999999
Q ss_pred EEEEEecCC
Q psy4596 342 ISLTVCKGF 350 (439)
Q Consensus 342 v~l~v~r~~ 350 (439)
+.|+|.|..
T Consensus 383 v~L~v~r~~ 391 (721)
T 2xkx_A 383 VTIIAQYKP 391 (721)
T ss_pred EEEEEEeCc
Confidence 999998763
No 2
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=99.95 E-value=9.4e-27 Score=209.58 Aligned_cols=187 Identities=40% Similarity=0.610 Sum_probs=154.6
Q ss_pred CceeEEEEEecCC-CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHH
Q psy4596 157 SLFLQDVVLPKSG-PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLA 235 (439)
Q Consensus 157 ~~~~~~v~l~~~~-~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~ 235 (439)
.++.++|+|.+.+ +|||++.++.+... .....|++|..|.++|||+++|+|++||+|++|||.++.++++.++...
T Consensus 3 ~~~~~~v~l~~~~~~lG~~i~~g~~~~~---~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~ 79 (196)
T 3gsl_A 3 SMEYEEITLERGNSGLGFSIAGGTDNPH---IGDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEA 79 (196)
T ss_dssp CEEEEEEEEECBTTBSSEEEECCTTSCT---TSSCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHH
T ss_pred CcEEEEEEEEECCCCCCEEEEcccCCcc---cCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 4678899999887 99999999876432 1124589999999999999999999999999999999999999999988
Q ss_pred HhCCCCeEEEEEecCCCCCCc-ceeeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCE
Q psy4596 236 LLEPCPEILLKIQHDPHPEGF-QEITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMR 314 (439)
Q Consensus 236 l~~~~~~v~l~v~r~~~~~~~-~~v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~ 314 (439)
++..+..+.|++.|.+..... .++.+.+ ....|||.+.++.. ........|++|..|.++|+|+++|+|++||+
T Consensus 80 ~~~~g~~v~l~v~r~~~~~~~~~~v~l~~-~~~~lG~~~~~~~~----~~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~ 154 (196)
T 3gsl_A 80 LKEAGSIVRLYVMRRKPPAEKVMEIKLIK-GPKGLGFSIAGGVG----NQHIPGDNSIYVTKIIEGGAAHKDGRLQIGDK 154 (196)
T ss_dssp HHTSCSEEEEEEEEECCCCEEEEEEEEEE-BTTBSCEEEEESBT----SCSBTTBCCEEEEEECTTSHHHHHCCCCTTCE
T ss_pred HHhCCCcEEEEEEecCCCccccEEEEEec-CCCCceEEEEccCC----CcCCCCCCCEEEEEECCCChHHhcCCCCCCCE
Confidence 888899999999987654322 2333333 34579999986532 11122345899999999999999999999999
Q ss_pred EEEECCEEcCCCCHHHHHHHHhcCCCeEEEEEecCCc
Q psy4596 315 LLEVNGMSLLGASHQEAVNTLRYSGHQISLTVCKGFE 351 (439)
Q Consensus 315 Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l~v~r~~~ 351 (439)
|++|||+++.+++|.+++.+|+++++.+.|+|.|...
T Consensus 155 Il~Vng~~v~~~~~~~~~~~l~~~~~~v~l~v~R~~~ 191 (196)
T 3gsl_A 155 ILAVNSVGLEDVMHEDAVAALKNTYDVVYLKVAKPSN 191 (196)
T ss_dssp EEEETTEECSSCBHHHHHHHHHSCCEEEEEEEEEESC
T ss_pred EEEECCCcCCCCCHHHHHHHHHcCCCeEEEEEeCCCC
Confidence 9999999999999999999999999999999998643
No 3
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=99.94 E-value=2e-25 Score=202.63 Aligned_cols=176 Identities=21% Similarity=0.338 Sum_probs=147.5
Q ss_pred eeEEEEEecCC-CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCC--CCHHHHHHH
Q psy4596 159 FLQDVVLPKSG-PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSK--VTHEEAVLA 235 (439)
Q Consensus 159 ~~~~v~l~~~~-~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~--~~~~~~~~~ 235 (439)
....+.+.+.+ +|||+|.++.+... ..|++|..|.++|+|+++|+|++||+|++|||+++.+ ++|.+++..
T Consensus 18 ~~~~v~~~~~~~~lG~~i~~g~~~~~------~~g~~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~ 91 (206)
T 3r0h_A 18 KKILIELKVEKKPMGVIVCGGKNNHV------TTGCVITHVYPEGQVAADKRLKIFDHICDINGTPIHVGSMTTLKVHQL 91 (206)
T ss_dssp SCEEEEEECTTSCCCEEEECCSSSSC------CSCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECCGGGSCHHHHHHH
T ss_pred CEEEEEEEeCCCCcCEEEecccCCCC------CCCeEEEEECCCChHHhcCCCCCCCEEEEECCEEcCCCccCHHHHHHH
Confidence 34567888876 99999998776421 1489999999999999998899999999999999999 889999988
Q ss_pred HhCCCCe-EEEEEecCCCCCCc-ceeeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCC
Q psy4596 236 LLEPCPE-ILLKIQHDPHPEGF-QEITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGM 313 (439)
Q Consensus 236 l~~~~~~-v~l~v~r~~~~~~~-~~v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD 313 (439)
++..+.. +.|+|.|++..... .++.+.+.....|||.+... ..+++|.+|.++|+|+++|+|++||
T Consensus 92 ~~~~~~~~v~l~v~R~~~~~~~~~~v~l~~~~~~~lG~~~~~~------------~~gv~V~~V~~gs~A~~aG~L~~GD 159 (206)
T 3r0h_A 92 FHTTYEKAVTLTVFRADPPELEKFNVDLMKKAGKELGLSLSPN------------EIGCTIADLIQGQYPEIDSKLQRGD 159 (206)
T ss_dssp HHSCCSSEEEEEEECCSSCCEEEEEEEEECCTTCCCCEEEEEC------------SSCEEEEEECTTSCHHHHHHCCTTC
T ss_pred HHhcCCCceEEEEEecccCCCcEEEEEEecCCCCccCeEEEcC------------CceEEEEEECCCChHHHcCCCCCCC
Confidence 8887777 99999998765321 23333444456799988743 2489999999999999998899999
Q ss_pred EEEEECCEEcCCCCHHHHHHHHhcCCCeEEEEEecCCcc
Q psy4596 314 RLLEVNGMSLLGASHQEAVNTLRYSGHQISLTVCKGFER 352 (439)
Q Consensus 314 ~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l~v~r~~~~ 352 (439)
+|++|||++|.++++.+++.+|++.+..+.|+|.|....
T Consensus 160 ~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~L~V~R~~~~ 198 (206)
T 3r0h_A 160 IITKFNGDALEGLPFQVCYALFKGANGKVSMEVTRPKPT 198 (206)
T ss_dssp EEEEETTEECTTCCHHHHHHHHHTCCSEEEEEEEEECCC
T ss_pred EEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCCCC
Confidence 999999999999999999999999999999999986443
No 4
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=99.91 E-value=8.1e-23 Score=184.56 Aligned_cols=178 Identities=33% Similarity=0.549 Sum_probs=144.4
Q ss_pred eeEEEEEecCC--CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhc-CCCCCCCEEEEECCeeCCCCCHHHHHHH
Q psy4596 159 FLQDVVLPKSG--PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALS-GKLRMGDRILAVNGRDVSKVTHEEAVLA 235 (439)
Q Consensus 159 ~~~~v~l~~~~--~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~-G~L~~GD~Il~VNg~~v~~~~~~~~~~~ 235 (439)
..+.+.|.+.. +|||++.++.+. ..+++|..|.++|||+++ | |++||+|++|||.++.+++|.++...
T Consensus 7 ~~~~v~l~~~~~~~lG~~i~~~~~~--------~~~~~V~~v~~~spA~~agg-l~~GD~I~~vng~~v~~~~~~~~~~~ 77 (200)
T 2qt5_A 7 GSTVVELMKKEGTTLGLTVSGGIDK--------DGKPRVSNLRQGGIAARSDQ-LDVGDYIKAVNGINLAKFRHDEIISL 77 (200)
T ss_dssp EEEEEEEECCTTCCCCEEEECCTTS--------SSCSEEEEECTTSHHHHTTS-CCTTCEEEEETTEECTTSCHHHHHHH
T ss_pred CCEEEEEEeCCCCCCCEEEecccCC--------CCCeEEEEECCCChHHhcCC-CCCCCEEEEECCEECCCCCHHHHHHH
Confidence 45667777643 999999987553 236899999999999999 8 99999999999999999999999988
Q ss_pred HhCCCCeEEEEEecCCCCC-----C--cceeeee-eccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcC
Q psy4596 236 LLEPCPEILLKIQHDPHPE-----G--FQEITLI-RQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDG 307 (439)
Q Consensus 236 l~~~~~~v~l~v~r~~~~~-----~--~~~v~l~-~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G 307 (439)
+...+..+.|+|.|+..+. . ..++.+. ......|||.+.++.... .....+++|..|.++|+|+++|
T Consensus 78 ~~~~g~~v~l~v~R~~~~~~~~g~~~~~~~~~v~l~~~~~~lG~~l~~g~~~~-----~~~~~g~~V~~v~~~s~A~~aG 152 (200)
T 2qt5_A 78 LKNVGERVVLEVEYELPPVSIQGSSVMFRTVEVTLHKEGNTFGFVIRGGAHDD-----RNKSRPVVITCVRPGGPADREG 152 (200)
T ss_dssp HHTCCSEEEEEEEEECCCCCCCCSSEEEEEEEEEEECBTTBCSEEEEEECCSS-----TTTCEEEEEEEECTTSHHHHHC
T ss_pred HHhCCCeEEEEEeccCCCcccCCCccceeEEEEEEecCCCCeEEEEECCCCCC-----ccCCCCEEEEEECCCChHHHcC
Confidence 8888899999999876431 1 0222221 244567999988653211 1113589999999999999999
Q ss_pred CCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCeEEEEEecCC
Q psy4596 308 RLKVGMRLLEVNGMSLLGASHQEAVNTLRYSGHQISLTVCKGF 350 (439)
Q Consensus 308 ~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l~v~r~~ 350 (439)
+|++||+|++|||+++.++++.++.++|+..+..+.|+|.|..
T Consensus 153 ~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~R~~ 195 (200)
T 2qt5_A 153 TIKPGDRLLSVDGIRLLGTTHAEAMSILKQCGQEATLLIEYDV 195 (200)
T ss_dssp CCCTTCEEEEETTEECTTCCHHHHHHHHHTTCSEEEEEEEEEE
T ss_pred CCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECC
Confidence 9999999999999999999999999999998899999998853
No 5
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=99.91 E-value=8.9e-23 Score=183.67 Aligned_cols=180 Identities=26% Similarity=0.384 Sum_probs=147.4
Q ss_pred eeEEEEEecCC--CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHH
Q psy4596 159 FLQDVVLPKSG--PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLAL 236 (439)
Q Consensus 159 ~~~~v~l~~~~--~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l 236 (439)
+..+|.|.+.. +|||++.++.+... ....+++|..|.++|||+++|+|++||+|++|||.++.+++|.++...+
T Consensus 6 ~~~~v~l~~~~~~glG~~i~~~~~~~~----~~~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l 81 (196)
T 1p1d_A 6 ETTEVVLTADPVTGFGIQLQGSVFATE----TLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLL 81 (196)
T ss_dssp EEEEEEEECBTTTBCCCEEEECSSCSS----SCSCSEEEEECCTTSHHHHTSCCCSSCCEEEETTBCSTTSCHHHHHHHH
T ss_pred EEEEEEEEeCCCCccCEEEeCCcCCCC----CCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 56778888863 99999999765321 1245799999999999999999999999999999999999999999888
Q ss_pred hCC--CCeEEEEEecCCCCC-----CcceeeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCC
Q psy4596 237 LEP--CPEILLKIQHDPHPE-----GFQEITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRL 309 (439)
Q Consensus 237 ~~~--~~~v~l~v~r~~~~~-----~~~~v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L 309 (439)
... +..+.|+|.|++... ....+.+.......|||.+....... ...+++|.+|.++|+|+++|+|
T Consensus 82 ~~~~~g~~v~l~v~R~~~~~~~~~~~~~~v~l~~~~~~~lG~~~~~~~~~~-------~~~gv~V~~V~~~s~A~~aG~l 154 (196)
T 1p1d_A 82 RDSSITSKVTLEIEFDVAESVIPSSGTFHVKLPKKHSVELGITISSPSSRK-------PGDPLVISDIKKGSVAHRTGTL 154 (196)
T ss_dssp HTCCSSSEEEEEEEECSCSCCBCCSSCEEEEECCCSSCCCCCEEECSCSSS-------TTCCCEEEECCSSSHHHHTSCC
T ss_pred HhCCCCCeEEEEEEecCCCCCCCCCCcEEEEecCCCCCCcCEEEECCCCCC-------CCCCEEEEEECCCCcHHhcCCC
Confidence 865 788999999987532 11233333334567899887643211 1358999999999999999999
Q ss_pred CCCCEEEEECCEEcCCCCHHHHHHHHhcCCCeEEEEEecC
Q psy4596 310 KVGMRLLEVNGMSLLGASHQEAVNTLRYSGHQISLTVCKG 349 (439)
Q Consensus 310 ~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l~v~r~ 349 (439)
++||+|++|||+++.++++.++.++|++.+..+.|+|.|.
T Consensus 155 ~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l~v~R~ 194 (196)
T 1p1d_A 155 ELGDKLLAIDNIRLDSCSMEDAVQILQQCEDLVKLKIRKD 194 (196)
T ss_dssp CTTCEEEEETTEEGGGCCHHHHHHHHHHCTTCEEEEEECC
T ss_pred CCCCEEEEECCEECCCCCHHHHHHHHHhCCCEEEEEEEeC
Confidence 9999999999999999889999999998899999999886
No 6
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=99.90 E-value=2.6e-22 Score=214.06 Aligned_cols=188 Identities=39% Similarity=0.608 Sum_probs=156.0
Q ss_pred CCceeEEEEEecCC-CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHH
Q psy4596 156 SSLFLQDVVLPKSG-PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVL 234 (439)
Q Consensus 156 ~~~~~~~v~l~~~~-~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~ 234 (439)
..+..++|.|.+.. +|||+|.++.+... .....|++|..|.++|+|+++|+|++||+|++|||.++.+++|.+++.
T Consensus 56 ~~~~~~~v~l~k~~~glGf~i~gg~~~~~---~~~~~g~~V~~v~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~ 132 (721)
T 2xkx_A 56 GEMEYEEITLERGNSGLGFSIAGGTDNPH---IGDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVE 132 (721)
T ss_pred CCceEEEEEEEeCCCCCCEEEeCCcCCcc---cCCCCCeEEEEeCCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 44577889999876 99999999876432 123458999999999999999999999999999999999999999998
Q ss_pred HHhCCCCeEEEEEecCCCCC-CcceeeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCC
Q psy4596 235 ALLEPCPEILLKIQHDPHPE-GFQEITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGM 313 (439)
Q Consensus 235 ~l~~~~~~v~l~v~r~~~~~-~~~~v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD 313 (439)
.++..+..+.|+|.|.+... ...++.+.+. ..+|||++.++.... ..+...|++|..|.++|+|+++|+|++||
T Consensus 133 ~l~~~g~~v~l~v~R~~~~~~~~~~v~l~k~-~~~lG~~i~~~~~~~----~~~~~~gv~V~~V~~gs~A~~aG~L~~GD 207 (721)
T 2xkx_A 133 ALKEAGSIVRLYVMRRKPPAEKVMEIKLIKG-PKGLGFSIAGGVGNQ----HIPGDNSIYVTKIIEGGAAHKDGRLQIGD 207 (721)
T ss_pred HhhccccccceEEEecccccccceeeeeeee-cCCCceeeccCCCcc----ccCCCCceEEEEeCCCCchhhcCCCCCCC
Confidence 88888899999999987542 1234444433 456999998754221 11234689999999999999999999999
Q ss_pred EEEEECCEEcCCCCHHHHHHHHhcCCCeEEEEEecCCc
Q psy4596 314 RLLEVNGMSLLGASHQEAVNTLRYSGHQISLTVCKGFE 351 (439)
Q Consensus 314 ~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l~v~r~~~ 351 (439)
+|++|||++|.+++|.+++.+|+..+..|.|+|.|...
T Consensus 208 ~Il~Vng~~v~~~~~~~~~~~l~~~~~~v~l~V~R~g~ 245 (721)
T 2xkx_A 208 KILAVNSVGLEDVMHEDAVAALKNTYDVVYLKVAKPSN 245 (721)
T ss_pred EEEEECCeeCCCCCHHHHHHHHHcCCCeEEEEEEeCCc
Confidence 99999999999999999999999989999999988643
No 7
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=99.86 E-value=4.1e-20 Score=161.65 Aligned_cols=158 Identities=27% Similarity=0.467 Sum_probs=129.9
Q ss_pred eeEEEEEecC--CCccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHH
Q psy4596 159 FLQDVVLPKS--GPLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLAL 236 (439)
Q Consensus 159 ~~~~v~l~~~--~~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l 236 (439)
..+.|.|.+. ++|||.+.... .|++|..|.++|||+++| |++||+|++|||.++.++++......+
T Consensus 4 ~~r~v~l~k~~~~~lG~~~~~~~-----------~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~ 71 (166)
T 1w9e_A 4 DPREVILCKDQDGKIGLRLKSID-----------NGIFVQLVQANSPASLVG-LRFGDQVLQINGENCAGWSSDKAHKVL 71 (166)
T ss_dssp CCEEEEEECCTTSCCSEEEEEET-----------TEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CCEEEEEEeCCCCcEeEEEEeCC-----------CCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 4577888885 38999998742 379999999999999999 999999999999999988875555555
Q ss_pred h-CCCCeEEEEEecCCCCCCcceeeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEE
Q psy4596 237 L-EPCPEILLKIQHDPHPEGFQEITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRL 315 (439)
Q Consensus 237 ~-~~~~~v~l~v~r~~~~~~~~~v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~I 315 (439)
. ..+..+.|+|+|.+.. .++.+.......|||.+.. + +|..|.++|+|+++| |++||+|
T Consensus 72 ~~~~~~~v~l~vr~~~~~---~~v~l~~~~~~~lG~~~~~---------------g-~v~~v~~~s~a~~aG-l~~GD~I 131 (166)
T 1w9e_A 72 KQAFGEKITMTIRDRPFE---RTITMHKDSTGHVGFIFKN---------------G-KITSIVKDSSAARNG-LLTEHNI 131 (166)
T ss_dssp HHCCSSEEEEEEECCTTC---EEEEEECCTTSCCSEEEET---------------T-EEEEECTTSHHHHTT-CCSSEEE
T ss_pred hcCCCCEEEEEEEcCCCc---EEEEEecCCCCcEeEEEeC---------------C-EEEEEccCCHHHHcC-CCCCCEE
Confidence 4 3566899999554343 4455554445678887751 4 899999999999999 9999999
Q ss_pred EEECCEEcCCCCHHHHHHHHhcCCCeEEEEEec
Q psy4596 316 LEVNGMSLLGASHQEAVNTLRYSGHQISLTVCK 348 (439)
Q Consensus 316 l~VNg~~v~~~~~~~~~~~l~~~~~~v~l~v~r 348 (439)
++|||.++.++.+.++...+++.+..+.|.+..
T Consensus 132 ~~ing~~v~~~~~~~v~~~v~r~g~~~~l~v~~ 164 (166)
T 1w9e_A 132 CEINGQNVIGLKDSQIADILSTSGTVVTITIMP 164 (166)
T ss_dssp EEETTEECTTCCHHHHHHHHHHSCSEEEEEEEE
T ss_pred EEECCEECCCCChHHHHHHHhhCCCEEEEEEEE
Confidence 999999999999999998899989988888764
No 8
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=99.86 E-value=1.9e-20 Score=168.19 Aligned_cols=155 Identities=30% Similarity=0.469 Sum_probs=125.6
Q ss_pred cccCcceeEEe------cCcccc-cCCCCEEEEECCeecCCCCHHHHHHHHhhcCCeEEEEEEeccccCccccccCCCCC
Q psy4596 10 WTGEQAGVILA------AGEVVI-HPVGMRLLEVNGMSLLGASHQEAVNTLRYSGHQISLTVCKGFERGDIERRASTSEG 82 (439)
Q Consensus 10 ~~~~~~Gi~vs------a~~~~g-L~~GD~Il~VNG~~v~~~~~~~~v~~l~~~~~~v~L~V~R~~~~~~~~~~~~~~~~ 82 (439)
+.+...|++|+ +|..+| |++||+|++|||+++.++++.+++.+++.++..++|+|.|....
T Consensus 30 ~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~r~~~~------------ 97 (196)
T 3gsl_A 30 HIGDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALKEAGSIVRLYVMRRKPP------------ 97 (196)
T ss_dssp TTSSCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTSCSEEEEEEEEECCC------------
T ss_pred ccCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEEEEEecCCC------------
Confidence 33446799997 455567 99999999999999999999999999999999999999983200
Q ss_pred CCCccccCCCCCcCCCcccccccCccceeeeccccCCCCCCCCCCCCcccccCCCCCcccccccCcCCCCCCCCCceeEE
Q psy4596 83 SRSVTQSMSSLDREDLDTDVFKQGQWSTVVTAHQRLDTGYGLPSNSTVAAHISSSLKPSILVTYNFFSPSVRSSSLFLQD 162 (439)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (439)
......
T Consensus 98 --------------------------------------------------------------------------~~~~~~ 103 (196)
T 3gsl_A 98 --------------------------------------------------------------------------AEKVME 103 (196)
T ss_dssp --------------------------------------------------------------------------CEEEEE
T ss_pred --------------------------------------------------------------------------ccccEE
Confidence 002234
Q ss_pred EEEecCC-CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHhCCCC
Q psy4596 163 VVLPKSG-PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALLEPCP 241 (439)
Q Consensus 163 v~l~~~~-~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~ 241 (439)
+.+.+.. .|||++.+.......+ ...|++|..|.++|+|+++|+|++||+|++|||+++.+++|.+++..++..++
T Consensus 104 v~l~~~~~~lG~~~~~~~~~~~~~---~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~ 180 (196)
T 3gsl_A 104 IKLIKGPKGLGFSIAGGVGNQHIP---GDNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHEDAVAALKNTYD 180 (196)
T ss_dssp EEEEEBTTBSCEEEEESBTSCSBT---TBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCBHHHHHHHHHSCCE
T ss_pred EEEecCCCCceEEEEccCCCcCCC---CCCCEEEEEECCCChHHhcCCCCCCCEEEEECCCcCCCCCHHHHHHHHHcCCC
Confidence 5555544 8999998865432211 23489999999999999999999999999999999998889999999998888
Q ss_pred eEEEEEecCCCC
Q psy4596 242 EILLKIQHDPHP 253 (439)
Q Consensus 242 ~v~l~v~r~~~~ 253 (439)
.+.|+|.|++..
T Consensus 181 ~v~l~v~R~~~~ 192 (196)
T 3gsl_A 181 VVYLKVAKPSNA 192 (196)
T ss_dssp EEEEEEEEESCC
T ss_pred eEEEEEeCCCCc
Confidence 999999997654
No 9
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=99.83 E-value=1.8e-19 Score=163.23 Aligned_cols=142 Identities=16% Similarity=0.214 Sum_probs=116.0
Q ss_pred ceeEEe------cCccc-ccCCCCEEEEECCeecCC--CCHHHHHHHHhhcCCe-EEEEEEeccccCccccccCCCCCCC
Q psy4596 15 AGVILA------AGEVV-IHPVGMRLLEVNGMSLLG--ASHQEAVNTLRYSGHQ-ISLTVCKGFERGDIERRASTSEGSR 84 (439)
Q Consensus 15 ~Gi~vs------a~~~~-gL~~GD~Il~VNG~~v~~--~~~~~~v~~l~~~~~~-v~L~V~R~~~~~~~~~~~~~~~~~~ 84 (439)
.|++|. +|..+ +|++||+|++|||+++.+ ++|.+++.+++.++.. +.|+|.|....
T Consensus 45 ~g~~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~~~~~~~~v~l~v~R~~~~-------------- 110 (206)
T 3r0h_A 45 TGCVITHVYPEGQVAADKRLKIFDHICDINGTPIHVGSMTTLKVHQLFHTTYEKAVTLTVFRADPP-------------- 110 (206)
T ss_dssp SCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECCGGGSCHHHHHHHHHSCCSSEEEEEEECCSSC--------------
T ss_pred CCeEEEEECCCChHHhcCCCCCCCEEEEECCEEcCCCccCHHHHHHHHHhcCCCceEEEEEecccC--------------
Confidence 589987 34444 499999999999999999 9999999999998778 99999984210
Q ss_pred CccccCCCCCcCCCcccccccCccceeeeccccCCCCCCCCCCCCcccccCCCCCcccccccCcCCCCCCCCCceeEEEE
Q psy4596 85 SVTQSMSSLDREDLDTDVFKQGQWSTVVTAHQRLDTGYGLPSNSTVAAHISSSLKPSILVTYNFFSPSVRSSSLFLQDVV 164 (439)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~v~ 164 (439)
......+.
T Consensus 111 ------------------------------------------------------------------------~~~~~~v~ 118 (206)
T 3r0h_A 111 ------------------------------------------------------------------------ELEKFNVD 118 (206)
T ss_dssp ------------------------------------------------------------------------CEEEEEEE
T ss_pred ------------------------------------------------------------------------CCcEEEEE
Confidence 00123344
Q ss_pred EecC--CCccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHhCCCCe
Q psy4596 165 LPKS--GPLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALLEPCPE 242 (439)
Q Consensus 165 l~~~--~~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~ 242 (439)
+.+. ..|||++... ..|++|..|.++|+|+++|+|++||+|++|||+++.++++.+++..++..++.
T Consensus 119 l~~~~~~~lG~~~~~~-----------~~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~ 187 (206)
T 3r0h_A 119 LMKKAGKELGLSLSPN-----------EIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFKGANGK 187 (206)
T ss_dssp EECCTTCCCCEEEEEC-----------SSCEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSE
T ss_pred EecCCCCccCeEEEcC-----------CceEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 4443 2799998853 23799999999999999988999999999999999999999999999888889
Q ss_pred EEEEEecCCCC
Q psy4596 243 ILLKIQHDPHP 253 (439)
Q Consensus 243 v~l~v~r~~~~ 253 (439)
+.|+|.|....
T Consensus 188 v~L~V~R~~~~ 198 (206)
T 3r0h_A 188 VSMEVTRPKPT 198 (206)
T ss_dssp EEEEEEEECCC
T ss_pred EEEEEEeCCCC
Confidence 99999986543
No 10
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=99.83 E-value=1.9e-21 Score=192.62 Aligned_cols=165 Identities=26% Similarity=0.443 Sum_probs=73.2
Q ss_pred eeEEEEEecC-C-CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHH
Q psy4596 159 FLQDVVLPKS-G-PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLAL 236 (439)
Q Consensus 159 ~~~~v~l~~~-~-~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l 236 (439)
..+.|.+.+. + +|||+|.+... |...++++|..|.++|||+++|+|++||+|++|||.++.++++.+++..+
T Consensus 204 ~~~~V~i~k~~ge~lG~~i~~~~~------g~~~~g~~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~~~~~~~~~l 277 (388)
T 3suz_A 204 NCKELQLEKHKGEILGVVVVESGW------GSILPTVILANMMNGGPAARSGKLSIGDQIMSINGTSLVGLPLATCQGII 277 (388)
T ss_dssp CCEEEEECCCSSCCCCCCCBCC---------CCSCCCBCCCCCCSSHHHHTCCCCTTCEEEEETTEECSSCCSTTHHHHT
T ss_pred cceEEEEECCCCCceeEEEEecCC------CCcCCCEEEEeeCCCCHHHHcCCCCCCCEEEEECCEEccCCCHHHHHHHH
Confidence 4577888886 4 89999887322 33345799999999999999999999999999999999999989988888
Q ss_pred hCC--CCeEEEEEecCCCCCCcceeee-eeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCC
Q psy4596 237 LEP--CPEILLKIQHDPHPEGFQEITL-IRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGM 313 (439)
Q Consensus 237 ~~~--~~~v~l~v~r~~~~~~~~~v~l-~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD 313 (439)
+.. +..+.|+|.|.+.. .++.+ .......|||.+.+ .+|..|.++|+|+++| |++||
T Consensus 278 ~~~~~~~~v~l~v~r~~~~---~~v~l~~~~~~~~lG~~i~~----------------g~I~~V~~gs~A~~aG-L~~GD 337 (388)
T 3suz_A 278 KGLKNQTQVKLNIVSCPPV---TTVLIKRPDLKYQLGFSVQN----------------GIICSLMRGGIAERGG-VRVGH 337 (388)
T ss_dssp TTCTTCSCEEEEEEECCSC---C---------------------------------------------------------
T ss_pred HhccCCCcccccccccccc---ceeeEeecCCCCccceEEec----------------CEEEEeecCCHHHHcC-CCCCC
Confidence 764 45699999998765 23333 22334567887643 3799999999999999 99999
Q ss_pred EEEEECCEEcCCCCHHHHHHHHhcCCCeEEEEEecC
Q psy4596 314 RLLEVNGMSLLGASHQEAVNTLRYSGHQISLTVCKG 349 (439)
Q Consensus 314 ~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l~v~r~ 349 (439)
+|++|||++|.+++|++++++|++++..+.|+|.+.
T Consensus 338 ~Il~VNg~~v~~~s~~~~~~~l~~~~~~v~L~V~p~ 373 (388)
T 3suz_A 338 RIIEINGQSVVATAHEKIVQALSNSVGEIHMKTMPA 373 (388)
T ss_dssp ------------------------------------
T ss_pred EEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEec
Confidence 999999999999999999999999999999999754
No 11
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=99.79 E-value=6.9e-18 Score=152.11 Aligned_cols=157 Identities=28% Similarity=0.374 Sum_probs=120.6
Q ss_pred cceeEEe------cCccc-ccCCCCEEEEECCeecCCCCHHHHHHHHhhcCCeEEEEEEeccccCccccccCCCCCCCCc
Q psy4596 14 QAGVILA------AGEVV-IHPVGMRLLEVNGMSLLGASHQEAVNTLRYSGHQISLTVCKGFERGDIERRASTSEGSRSV 86 (439)
Q Consensus 14 ~~Gi~vs------a~~~~-gL~~GD~Il~VNG~~v~~~~~~~~v~~l~~~~~~v~L~V~R~~~~~~~~~~~~~~~~~~~~ 86 (439)
..|++|+ +|..+ ||++||+|++|||+++.+++|.+++.+++.++..|.|+|.|+.....
T Consensus 32 ~~~~~V~~v~~~spA~~aggl~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~~~~-------------- 97 (200)
T 2qt5_A 32 DGKPRVSNLRQGGIAARSDQLDVGDYIKAVNGINLAKFRHDEIISLLKNVGERVVLEVEYELPPVS-------------- 97 (200)
T ss_dssp SSCSEEEEECTTSHHHHTTSCCTTCEEEEETTEECTTSCHHHHHHHHHTCCSEEEEEEEEECCCCC--------------
T ss_pred CCCeEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEeccCCCcc--------------
Confidence 4678886 34444 89999999999999999999999999999999999999998421000
Q ss_pred cccCCCCCcCCCcccccccCccceeeeccccCCCCCCCCCCCCcccccCCCCCcccccccCcCCCCCCCCCceeEEEEEe
Q psy4596 87 TQSMSSLDREDLDTDVFKQGQWSTVVTAHQRLDTGYGLPSNSTVAAHISSSLKPSILVTYNFFSPSVRSSSLFLQDVVLP 166 (439)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~v~l~ 166 (439)
. .+.. .......+.+.
T Consensus 98 -~----------------~g~~-----------------------------------------------~~~~~~~v~l~ 113 (200)
T 2qt5_A 98 -I----------------QGSS-----------------------------------------------VMFRTVEVTLH 113 (200)
T ss_dssp -C----------------CCSS-----------------------------------------------EEEEEEEEEEE
T ss_pred -c----------------CCCc-----------------------------------------------cceeEEEEEEe
Confidence 0 0000 00022344554
Q ss_pred cCC-CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHhCCCCeEEE
Q psy4596 167 KSG-PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALLEPCPEILL 245 (439)
Q Consensus 167 ~~~-~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l 245 (439)
+.. .|||.+.++..... ....|++|..|.++|+|+++|+|++||+|++|||.++.++++.++...++..+..+.|
T Consensus 114 ~~~~~lG~~l~~g~~~~~----~~~~g~~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l 189 (200)
T 2qt5_A 114 KEGNTFGFVIRGGAHDDR----NKSRPVVITCVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQCGQEATL 189 (200)
T ss_dssp CBTTBCSEEEEEECCSST----TTCEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTTCSEEEE
T ss_pred cCCCCeEEEEECCCCCCc----cCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEE
Confidence 444 89999987654211 1134899999999999999999999999999999999999999999999888889999
Q ss_pred EEecCCC
Q psy4596 246 KIQHDPH 252 (439)
Q Consensus 246 ~v~r~~~ 252 (439)
+|.|++.
T Consensus 190 ~v~R~~~ 196 (200)
T 2qt5_A 190 LIEYDVS 196 (200)
T ss_dssp EEEEEEE
T ss_pred EEEECCc
Confidence 9998754
No 12
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=99.77 E-value=6.1e-18 Score=170.09 Aligned_cols=170 Identities=23% Similarity=0.330 Sum_probs=126.2
Q ss_pred CCccEEEeeCCCCCCCCCCCCC-CcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHh--CCCCeEEE
Q psy4596 169 GPLGFSIIGGTDHSCIPFGQHK-PGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALL--EPCPEILL 245 (439)
Q Consensus 169 ~~lG~~i~~~~~~~~~~~g~~~-~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~--~~~~~v~l 245 (439)
+.||+.+...+...+..++++. .|++|..|.++|||+++| |++||+|++|||+++. ++.++...+. ..++.+.|
T Consensus 240 ~~lGv~~~~~~~~~a~~~gl~~~~G~~V~~V~~~spA~~aG-L~~GD~I~~vnG~~v~--~~~~l~~~l~~~~~g~~v~l 316 (436)
T 4a8c_A 240 GLLGIKGTEMSADIAKAFNLDVQRGAFVSEVLPGSGSAKAG-VKAGDIITSLNGKPLN--SFAELRSRIATTEPGTKVKL 316 (436)
T ss_pred ccCceEecccCHHHHHHhCCCCCcceEEEEECCCChHHHCC-CCCCCEEEEECCEECC--CHHHHHHHHHhcCCCCEEEE
Confidence 4788888776655555566543 589999999999999999 9999999999999999 5666665554 45789999
Q ss_pred EEecCCCCCCcceeeeeec--c-------CcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEE
Q psy4596 246 KIQHDPHPEGFQEITLIRQ--E-------GEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLL 316 (439)
Q Consensus 246 ~v~r~~~~~~~~~v~l~~~--~-------~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il 316 (439)
+|.|++.. .++.+... . ...+|+....-... ...+...|++|.+|.++|||+++| |++||+|+
T Consensus 317 ~v~R~g~~---~~~~v~l~~~~~~~~~~~~~~~gl~~~~~~~~----~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~I~ 388 (436)
T 4a8c_A 317 GLLRNGKP---LEVEVTLDTSTSSSASAEMITPALEGATLSDG----QLKDGGKGIKIDEVVKGSPAAQAG-LQKDDVII 388 (436)
T ss_pred EEEECCEE---EEEEEEECCCCcccccccccccCceeeecccc----cccCCCCCEEEEEeCCCCHHHHcC-CCCCCEEE
Confidence 99998755 22222211 1 01133332221100 001123589999999999999999 99999999
Q ss_pred EECCEEcCCCCHHHHHHHHhcCCCeEEEEEecCCc
Q psy4596 317 EVNGMSLLGASHQEAVNTLRYSGHQISLTVCKGFE 351 (439)
Q Consensus 317 ~VNg~~v~~~~~~~~~~~l~~~~~~v~l~v~r~~~ 351 (439)
+|||+++. +++++.++|++.+..+.|+|.|+..
T Consensus 389 ~vng~~v~--~~~~~~~~l~~~~~~v~l~v~R~g~ 421 (436)
T 4a8c_A 389 GVNRDRVN--SIAEMRKVLAAKPAIIALQIVRGNE 421 (436)
T ss_pred EECCEECC--CHHHHHHHHHhCCCeEEEEEEECCE
Confidence 99999995 5699999999977899999998743
No 13
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=99.75 E-value=6.3e-18 Score=170.44 Aligned_cols=170 Identities=16% Similarity=0.260 Sum_probs=129.0
Q ss_pred CCccEEEeeCCCCCCCCCCCCC--CcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHh--CCCCeEE
Q psy4596 169 GPLGFSIIGGTDHSCIPFGQHK--PGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALL--EPCPEIL 244 (439)
Q Consensus 169 ~~lG~~i~~~~~~~~~~~g~~~--~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~--~~~~~v~ 244 (439)
+.||+.+...++..+..+|++. .|++|..|.++|||+++| |++||+|++|||+++. ++.++...+. ..+..+.
T Consensus 258 ~~lGv~~~~~~~~~a~~~gl~~~~~G~~V~~V~~~spA~~aG-L~~GDvI~~vnG~~v~--~~~~l~~~l~~~~~g~~v~ 334 (451)
T 3pv2_A 258 GLMGIFVQHLTPELAQAMGYPEDFQGALVSQVNPNSPAELAG-LKAGDIITQINDTKIT--QATQVKTTISLLRVGSTVK 334 (451)
T ss_dssp CBCCEEEEECCHHHHHHTTSCTTCCCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECC--SHHHHHHHHHTSCTTCEEE
T ss_pred ccccceEEeccHHHHHhcCCCcCCceEEEEecCCCChHHHcC-CCCCCEEEEECCEEcC--CHHHHHHHHHhcCCCCEEE
Confidence 4789998887765555666654 589999999999999999 9999999999999999 6677766665 4678999
Q ss_pred EEEecCCCCCCcceeeeeec--c----------CcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCC
Q psy4596 245 LKIQHDPHPEGFQEITLIRQ--E----------GEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVG 312 (439)
Q Consensus 245 l~v~r~~~~~~~~~v~l~~~--~----------~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~G 312 (439)
|+|.|++.. .++.+... . ...+|+.+......... .....|++|.+|.++|+|+++| |++|
T Consensus 335 l~V~R~g~~---~~~~v~l~~~~~~~~~~~~~~~~~~G~~l~~~~~~~~~---~~~~~Gv~V~~V~~gspA~~aG-L~~G 407 (451)
T 3pv2_A 335 IIVERDNKP---LTLSAVVTDIKSHEQKLQSNNPFLYGLALRAFEQESPP---HGNVIGVQVVGASENSAGWRAG-IRPG 407 (451)
T ss_dssp EEEEETTEE---EEEEEECBCHHHHHHHHHHHSTTTTTEEEEEEEEECTT---SCEEEEEEEEEECTTSHHHHHT-CCTT
T ss_pred EEEEECCEE---EEEEEEEccCCccccccccccccccccccccCChhHhc---ccCCCceEEEEECCCCHHHHcC-CCCC
Confidence 999998755 22222211 1 11245555421110000 0113489999999999999999 9999
Q ss_pred CEEEEECCEEcCCCCHHHHHHHHhcCCCeEEEEEecCC
Q psy4596 313 MRLLEVNGMSLLGASHQEAVNTLRYSGHQISLTVCKGF 350 (439)
Q Consensus 313 D~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l~v~r~~ 350 (439)
|+|++|||+++. +.+++.++|++.+..+.|+|.|+.
T Consensus 408 D~I~~Vng~~v~--~~~~~~~~l~~~~~~v~l~v~R~g 443 (451)
T 3pv2_A 408 DIIISANKKPVT--DVKSLQTIAQEKKKELLVQVLRGP 443 (451)
T ss_dssp CEEEEETTEECC--SHHHHHHHTTSSCSCEEEEEEETT
T ss_pred CEEEEECCEECC--CHHHHHHHHhcCCCeEEEEEEECC
Confidence 999999999996 459999999998899999999864
No 14
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=99.74 E-value=6.4e-17 Score=145.24 Aligned_cols=150 Identities=28% Similarity=0.377 Sum_probs=116.2
Q ss_pred cceeEEe------cCcccc-cCCCCEEEEECCeecCCCCHHHHHHHHhhc--CCeEEEEEEeccccCccccccCCCCCCC
Q psy4596 14 QAGVILA------AGEVVI-HPVGMRLLEVNGMSLLGASHQEAVNTLRYS--GHQISLTVCKGFERGDIERRASTSEGSR 84 (439)
Q Consensus 14 ~~Gi~vs------a~~~~g-L~~GD~Il~VNG~~v~~~~~~~~v~~l~~~--~~~v~L~V~R~~~~~~~~~~~~~~~~~~ 84 (439)
..|++|+ +|..+| |++||+|++|||+++.++++.++..+|+.. +..++|+|.|+......
T Consensus 35 ~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~~~~~~----------- 103 (196)
T 1p1d_A 35 SSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRDSSITSKVTLEIEFDVAESVI----------- 103 (196)
T ss_dssp SCSEEEEECCTTSHHHHTSCCCSSCCEEEETTBCSTTSCHHHHHHHHHTCCSSSEEEEEEEECSCSCCB-----------
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEecCCCCCC-----------
Confidence 4578886 456667 999999999999999999999999999985 78999999985311000
Q ss_pred CccccCCCCCcCCCcccccccCccceeeeccccCCCCCCCCCCCCcccccCCCCCcccccccCcCCCCCCCCCceeEEEE
Q psy4596 85 SVTQSMSSLDREDLDTDVFKQGQWSTVVTAHQRLDTGYGLPSNSTVAAHISSSLKPSILVTYNFFSPSVRSSSLFLQDVV 164 (439)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~v~ 164 (439)
|.. ....+.
T Consensus 104 ----------------------------------------~~~-------------------------------~~~~v~ 112 (196)
T 1p1d_A 104 ----------------------------------------PSS-------------------------------GTFHVK 112 (196)
T ss_dssp ----------------------------------------CCS-------------------------------SCEEEE
T ss_pred ----------------------------------------CCC-------------------------------CcEEEE
Confidence 000 011223
Q ss_pred Eec--CCCccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHhCCCCe
Q psy4596 165 LPK--SGPLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALLEPCPE 242 (439)
Q Consensus 165 l~~--~~~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~ 242 (439)
+.+ ...|||.+....+.. ...|++|..|.++|+|+++|+|++||+|++|||.++.++++.++...+...+..
T Consensus 113 l~~~~~~~lG~~~~~~~~~~------~~~gv~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~ 186 (196)
T 1p1d_A 113 LPKKHSVELGITISSPSSRK------PGDPLVISDIKKGSVAHRTGTLELGDKLLAIDNIRLDSCSMEDAVQILQQCEDL 186 (196)
T ss_dssp ECCCSSCCCCCEEECSCSSS------TTCCCEEEECCSSSHHHHTSCCCTTCEEEEETTEEGGGCCHHHHHHHHHHCTTC
T ss_pred ecCCCCCCcCEEEECCCCCC------CCCCEEEEEECCCCcHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCE
Confidence 322 237899988754321 134799999999999999999999999999999999988899999998877889
Q ss_pred EEEEEecCC
Q psy4596 243 ILLKIQHDP 251 (439)
Q Consensus 243 v~l~v~r~~ 251 (439)
+.|+|.|++
T Consensus 187 v~l~v~R~~ 195 (196)
T 1p1d_A 187 VKLKIRKDE 195 (196)
T ss_dssp EEEEEECCC
T ss_pred EEEEEEeCC
Confidence 999999874
No 15
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=99.73 E-value=3.6e-17 Score=148.27 Aligned_cols=148 Identities=15% Similarity=0.143 Sum_probs=111.5
Q ss_pred CcEEEEEECCCChhhhcCCCCCC-CEEEEECCeeCCCCCHHHHHHHHhCCCCeEEEEEecCCCCCCcceeeeeec----c
Q psy4596 191 PGIFISHIVPGGVAALSGKLRMG-DRILAVNGRDVSKVTHEEAVLALLEPCPEILLKIQHDPHPEGFQEITLIRQ----E 265 (439)
Q Consensus 191 ~g~~V~~V~~~s~A~~~G~L~~G-D~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l~v~r~~~~~~~~~v~l~~~----~ 265 (439)
.|++|..|.++|||+++| |++| |+|++|||+++.++............+..+.|+|.|++.... ..+.+.+. .
T Consensus 16 ~G~~V~~V~~~SpA~~AG-L~~G~D~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~~~~-~~v~l~p~~~~~~ 93 (209)
T 3rle_A 16 EGYHVLRVQENSPGHRAG-LEPFFDFIVSINGSRLNKDNDTLKDLLKANVEKPVKMLIYSSKTLEL-RETSVTPSNLWGG 93 (209)
T ss_dssp EEEEEEEECTTSHHHHTT-CCTTTEEEEEETTEECCSSSSHHHHHHHHTTTSCEEEEEEETTTCCE-EEEEECCCSSSSS
T ss_pred CEEEEEEECCCCHHHHCC-CCcCCeEEEEECCEECcCHHHHHHHHHhcCCCCEEEEEEEecCCceE-EEEEEcccccccc
Confidence 489999999999999999 9999 999999999999766544433334568899999998764422 23333322 2
Q ss_pred CcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCC-CCEEEEECCEEcCCCCHHHHHHHHhc-CCCeEE
Q psy4596 266 GEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKV-GMRLLEVNGMSLLGASHQEAVNTLRY-SGHQIS 343 (439)
Q Consensus 266 ~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~-GD~Il~VNg~~v~~~~~~~~~~~l~~-~~~~v~ 343 (439)
...+|+.+..-.... ....|++|..|.++|||+++| |++ ||+|++|||. +.+ ++++.+.|++ .++.+.
T Consensus 94 ~~~lGi~~~~~~~~~------~~~~Gv~V~~V~~~spA~~aG-l~~~GD~I~~ing~-v~~--~~~l~~~l~~~~g~~v~ 163 (209)
T 3rle_A 94 QGLLGVSIRFCSFDG------ANENVWHVLEVESNSPAALAG-LRPHSDYIIGADTV-MNE--SEDLFSLIETHEAKPLK 163 (209)
T ss_dssp SSSSCEEEEEEECTT------GGGSCEEEEEECTTSHHHHHT-CCTTTEEEEEESSC-CCS--SSCHHHHHHHTTTSCEE
T ss_pred cCccceEEeecChhH------ccccceEEEEeCCCChHHHCC-CCCCCCEEEECCCE-eCC--HHHHHHHHHhCCCCeEE
Confidence 335788776321100 012489999999999999999 999 9999999998 754 4778888877 478999
Q ss_pred EEEecCC
Q psy4596 344 LTVCKGF 350 (439)
Q Consensus 344 l~v~r~~ 350 (439)
|+|.|..
T Consensus 164 l~v~r~~ 170 (209)
T 3rle_A 164 LYVYNTD 170 (209)
T ss_dssp EEEEETT
T ss_pred EEEEECC
Confidence 9998854
No 16
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=99.68 E-value=6.9e-16 Score=139.80 Aligned_cols=173 Identities=17% Similarity=0.151 Sum_probs=115.2
Q ss_pred cCcceeEEe------cCcccccCCC-CEEEEECCeecCCCCHHHHHHHHhhcCCeEEEEEEeccccCccccccCCCCCCC
Q psy4596 12 GEQAGVILA------AGEVVIHPVG-MRLLEVNGMSLLGASHQEAVNTLRYSGHQISLTVCKGFERGDIERRASTSEGSR 84 (439)
Q Consensus 12 ~~~~Gi~vs------a~~~~gL~~G-D~Il~VNG~~v~~~~~~~~v~~l~~~~~~v~L~V~R~~~~~~~~~~~~~~~~~~ 84 (439)
+...|++|. +|..+||++| |+|++|||+++.++++.....+....+..++|+|.|.........
T Consensus 13 ~~~~G~~V~~V~~~SpA~~AGL~~G~D~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~~~~~~v--------- 83 (209)
T 3rle_A 13 GGTEGYHVLRVQENSPGHRAGLEPFFDFIVSINGSRLNKDNDTLKDLLKANVEKPVKMLIYSSKTLELRET--------- 83 (209)
T ss_dssp SSSEEEEEEEECTTSHHHHTTCCTTTEEEEEETTEECCSSSSHHHHHHHHTTTSCEEEEEEETTTCCEEEE---------
T ss_pred CCCCEEEEEEECCCCHHHHCCCCcCCeEEEEECCEECcCHHHHHHHHHhcCCCCEEEEEEEecCCceEEEE---------
Confidence 567899997 5677889999 999999999999997755433334578899999998421100000
Q ss_pred CccccCCCCCcCCCcccccccCccceeeeccccCCCCCCCCCCCCcccccCCCCCcccccccCcCCCCCCCCCceeEEEE
Q psy4596 85 SVTQSMSSLDREDLDTDVFKQGQWSTVVTAHQRLDTGYGLPSNSTVAAHISSSLKPSILVTYNFFSPSVRSSSLFLQDVV 164 (439)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~v~ 164 (439)
... |.. . +
T Consensus 84 ---------------------------~l~----------p~~-~-------------------~--------------- 91 (209)
T 3rle_A 84 ---------------------------SVT----------PSN-L-------------------W--------------- 91 (209)
T ss_dssp ---------------------------EEC----------CCS-S-------------------S---------------
T ss_pred ---------------------------EEc----------ccc-c-------------------c---------------
Confidence 000 000 0 0
Q ss_pred EecCCCccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCC-CCEEEEECCeeCCCCCHHHHHHHHhC-CCCe
Q psy4596 165 LPKSGPLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRM-GDRILAVNGRDVSKVTHEEAVLALLE-PCPE 242 (439)
Q Consensus 165 l~~~~~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~-GD~Il~VNg~~v~~~~~~~~~~~l~~-~~~~ 242 (439)
...+.||+++...+.... ...|++|..|.++|||+++| |++ ||+|++|||. +. ++.++...+.. .++.
T Consensus 92 -~~~~~lGi~~~~~~~~~~-----~~~Gv~V~~V~~~spA~~aG-l~~~GD~I~~ing~-v~--~~~~l~~~l~~~~g~~ 161 (209)
T 3rle_A 92 -GGQGLLGVSIRFCSFDGA-----NENVWHVLEVESNSPAALAG-LRPHSDYIIGADTV-MN--ESEDLFSLIETHEAKP 161 (209)
T ss_dssp -SSSSSSCEEEEEEECTTG-----GGSCEEEEEECTTSHHHHHT-CCTTTEEEEEESSC-CC--SSSCHHHHHHHTTTSC
T ss_pred -cccCccceEEeecChhHc-----cccceEEEEeCCCChHHHCC-CCCCCCEEEECCCE-eC--CHHHHHHHHHhCCCCe
Confidence 002478998886543221 12589999999999999999 999 9999999998 87 44555555554 5788
Q ss_pred EEEEEecCCCCCCcceeeeeecc----CcccceeecCC
Q psy4596 243 ILLKIQHDPHPEGFQEITLIRQE----GEKLGMHIKGG 276 (439)
Q Consensus 243 v~l~v~r~~~~~~~~~v~l~~~~----~~~lG~~i~~~ 276 (439)
+.|+|.|+.... ..++.+.+.. .+.+|+.+..+
T Consensus 162 v~l~v~r~~~~~-~~~v~l~p~~~~~g~g~lG~~~~~g 198 (209)
T 3rle_A 162 LKLYVYNTDTDN-CREVIITPNSAWGGEGSLGCGIGYG 198 (209)
T ss_dssp EEEEEEETTTTE-EEEEEECCCTTSSSSSSSCEEEECS
T ss_pred EEEEEEECCceE-EEEEEEEecCCCCCceeeeEEecCc
Confidence 999998875432 1344444432 23467766544
No 17
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=99.65 E-value=4.7e-15 Score=129.38 Aligned_cols=129 Identities=24% Similarity=0.349 Sum_probs=101.4
Q ss_pred cceeEEe------cCcccccCCCCEEEEECCeecCCCCHHHHHHHHhh-cCCeEEEEEEeccccCccccccCCCCCCCCc
Q psy4596 14 QAGVILA------AGEVVIHPVGMRLLEVNGMSLLGASHQEAVNTLRY-SGHQISLTVCKGFERGDIERRASTSEGSRSV 86 (439)
Q Consensus 14 ~~Gi~vs------a~~~~gL~~GD~Il~VNG~~v~~~~~~~~v~~l~~-~~~~v~L~V~R~~~~~~~~~~~~~~~~~~~~ 86 (439)
..|++|+ +|..+||++||+|++|||+++.++++..+..+++. .+..+.|+|+|+..
T Consensus 26 ~~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~~~~~v~l~vr~~~~----------------- 88 (166)
T 1w9e_A 26 DNGIFVQLVQANSPASLVGLRFGDQVLQINGENCAGWSSDKAHKVLKQAFGEKITMTIRDRPF----------------- 88 (166)
T ss_dssp TTEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSSEEEEEEECCTT-----------------
T ss_pred CCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCCEEEEEEEcCCC-----------------
Confidence 4788887 45666799999999999999999998777777776 55699999955210
Q ss_pred cccCCCCCcCCCcccccccCccceeeeccccCCCCCCCCCCCCcccccCCCCCcccccccCcCCCCCCCCCceeEEEEEe
Q psy4596 87 TQSMSSLDREDLDTDVFKQGQWSTVVTAHQRLDTGYGLPSNSTVAAHISSSLKPSILVTYNFFSPSVRSSSLFLQDVVLP 166 (439)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~v~l~ 166 (439)
..++.+.
T Consensus 89 -------------------------------------------------------------------------~~~v~l~ 95 (166)
T 1w9e_A 89 -------------------------------------------------------------------------ERTITMH 95 (166)
T ss_dssp -------------------------------------------------------------------------CEEEEEE
T ss_pred -------------------------------------------------------------------------cEEEEEe
Confidence 0112222
Q ss_pred c--CCCccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHhCCCCeEE
Q psy4596 167 K--SGPLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALLEPCPEIL 244 (439)
Q Consensus 167 ~--~~~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~ 244 (439)
+ ...|||.+.. | +|..|.++|+|+++| |++||+|++|||.++.++.+..+...+.+.+..+.
T Consensus 96 ~~~~~~lG~~~~~--------------g-~v~~v~~~s~a~~aG-l~~GD~I~~ing~~v~~~~~~~v~~~v~r~g~~~~ 159 (166)
T 1w9e_A 96 KDSTGHVGFIFKN--------------G-KITSIVKDSSAARNG-LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVT 159 (166)
T ss_dssp CCTTSCCSEEEET--------------T-EEEEECTTSHHHHTT-CCSSEEEEEETTEECTTCCHHHHHHHHHHSCSEEE
T ss_pred cCCCCcEeEEEeC--------------C-EEEEEccCCHHHHcC-CCCCCEEEEECCEECCCCChHHHHHHHhhCCCEEE
Confidence 1 2368888761 4 899999999999999 99999999999999999999888877777777777
Q ss_pred EEEe
Q psy4596 245 LKIQ 248 (439)
Q Consensus 245 l~v~ 248 (439)
+.+.
T Consensus 160 l~v~ 163 (166)
T 1w9e_A 160 ITIM 163 (166)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6664
No 18
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=99.62 E-value=4.6e-17 Score=163.99 Aligned_cols=164 Identities=20% Similarity=0.307 Sum_probs=63.5
Q ss_pred CccEEEeeCCCCCCCCCCCCC-CcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHh--CCCCeEEEE
Q psy4596 170 PLGFSIIGGTDHSCIPFGQHK-PGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALL--EPCPEILLK 246 (439)
Q Consensus 170 ~lG~~i~~~~~~~~~~~g~~~-~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~--~~~~~v~l~ 246 (439)
.||+.+...++..+..++++. .|++|..|.++|||+++| |++||+|++|||.++. ++.++...+. ..++.+.|+
T Consensus 264 ~LGv~~~~~~~~~a~~lgl~~~~G~~V~~V~~gspA~~AG-L~~GDvI~~inG~~v~--~~~~l~~~l~~~~~g~~v~l~ 340 (448)
T 1ky9_A 264 ELGIMGTELNSELAKAMKVDAQRGAFVSQVLPNSSAAKAG-IKAGDVITSLNGKPIS--SFAALRAQVGTMPVGSKLTLG 340 (448)
T ss_dssp CCCCSCCCTTSHHHHTSCCTTCCSEECCCCTTCSSSTTTT-CCTTCEECBSSSSBCC--SSHHHHHHTTSSBTTCCCEEE
T ss_pred ccccccccccHHHHHHhCCCCCCceEEEEeccCCHHHHcC-CCCCCEEEEECCEEcC--CHHHHHHHHHhcCCCCEEEEE
Confidence 556655554444344455543 489999999999999999 9999999999999999 5566666665 357889999
Q ss_pred EecCCCCCCcceeeeeecc----------CcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEE
Q psy4596 247 IQHDPHPEGFQEITLIRQE----------GEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLL 316 (439)
Q Consensus 247 v~r~~~~~~~~~v~l~~~~----------~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il 316 (439)
|.|++..... .+.+.... ...+|+.+..- ....|++|..|.++|+|+++| |++||+|+
T Consensus 341 v~R~g~~~~~-~v~~~~~~~~~~~~~~~~~~~~G~~l~~~----------~~~~gv~V~~V~~gspA~~aG-L~~GDiI~ 408 (448)
T 1ky9_A 341 LLRDGKQVNV-NLELQQSSQNQVDSSSIFNGIEGAEMSNK----------GKDQGVVVNNVKTGTPAAQIG-LKKGDVII 408 (448)
T ss_dssp EESSSCEEEC-CCC------------------------------------------------------------------
T ss_pred EEECCEEEEE-EEEEecCCCcccccccccccccceEeecc----------CCCCeEEEEEecCCCHHHHcC-CCCCCEEE
Confidence 9998754211 11111110 01135444321 113589999999999999999 99999999
Q ss_pred EECCEEcCCCCHHHHHHHHhcCCCeEEEEEecCC
Q psy4596 317 EVNGMSLLGASHQEAVNTLRYSGHQISLTVCKGF 350 (439)
Q Consensus 317 ~VNg~~v~~~~~~~~~~~l~~~~~~v~l~v~r~~ 350 (439)
+|||+++. ++.++.++|+.....+.|+|.|..
T Consensus 409 ~vng~~v~--~~~~l~~~l~~~~~~v~l~v~R~g 440 (448)
T 1ky9_A 409 GANQQAVK--NIAELRKVLDSKPSVLALNIQRGD 440 (448)
T ss_dssp ----------------------------------
T ss_pred EECCEECC--CHHHHHHHHHcCCCeEEEEEEECC
Confidence 99999996 558899999886678889998864
No 19
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=99.59 E-value=7e-15 Score=111.54 Aligned_cols=76 Identities=26% Similarity=0.461 Sum_probs=68.3
Q ss_pred ceeeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHh
Q psy4596 257 QEITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLR 336 (439)
Q Consensus 257 ~~v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~ 336 (439)
+.+.+.+...+.|||+++++ +|.+|.++|||+++| |++||+|++|||+++.+++|++++++||
T Consensus 6 r~v~l~k~~~g~~Gf~i~~g----------------~I~~v~~gspA~~aG-l~~GD~Il~VNG~~v~~~~~~evv~llr 68 (82)
T 1r6j_A 6 RTITMHKDSTGHVGFIFKNG----------------KITSIVKDSSAARNG-LLTEHNICEINGQNVIGLKDSQIADILS 68 (82)
T ss_dssp EEEEEECCTTSCCCEEEETT----------------EEEEECTTSHHHHHT-CCSSEEEEEETTEECTTCCHHHHHHHHH
T ss_pred EEEEEEECCCCCeEEEEECC----------------EEEEecCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHHh
Confidence 45677777777899999753 378999999999999 9999999999999999999999999999
Q ss_pred cCCCeEEEEEecC
Q psy4596 337 YSGHQISLTVCKG 349 (439)
Q Consensus 337 ~~~~~v~l~v~r~ 349 (439)
+++..|+|+|.+.
T Consensus 69 ~~g~~V~L~v~p~ 81 (82)
T 1r6j_A 69 TSGTVVTITIMPA 81 (82)
T ss_dssp HSCSEEEEEEEEC
T ss_pred cCCCEEEEEEEeC
Confidence 9999999999764
No 20
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=99.58 E-value=3.1e-14 Score=143.13 Aligned_cols=155 Identities=19% Similarity=0.156 Sum_probs=104.6
Q ss_pred cceeEEe------cCcccccCCCCEEEEECCeecCCCCHHHHHHHHhhcCCeEEEEEEeccccCccccccCCCCCCCCcc
Q psy4596 14 QAGVILA------AGEVVIHPVGMRLLEVNGMSLLGASHQEAVNTLRYSGHQISLTVCKGFERGDIERRASTSEGSRSVT 87 (439)
Q Consensus 14 ~~Gi~vs------a~~~~gL~~GD~Il~VNG~~v~~~~~~~~v~~l~~~~~~v~L~V~R~~~~~~~~~~~~~~~~~~~~~ 87 (439)
..|++|. +|..+||+.||+|++|||+++.++.+.........+++.++|+|.|+.+...+....
T Consensus 262 ~~G~~V~~V~~~spA~~aGL~~GD~I~~vnG~~v~~~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~l---------- 331 (436)
T 4a8c_A 262 QRGAFVSEVLPGSGSAKAGVKAGDIITSLNGKPLNSFAELRSRIATTEPGTKVKLGLLRNGKPLEVEVTL---------- 331 (436)
T ss_pred CcceEEEEECCCChHHHCCCCCCCEEEEECCEECCCHHHHHHHHHhcCCCCEEEEEEEECCEEEEEEEEE----------
Confidence 4789887 567778999999999999999988654444333447899999999954321111100
Q ss_pred ccCCCCCcCCCcccccccCccceeeeccccCCCCCCCCCCCCcccccCCCCCcccccccCcCCCCCCCCCceeEEEEEec
Q psy4596 88 QSMSSLDREDLDTDVFKQGQWSTVVTAHQRLDTGYGLPSNSTVAAHISSSLKPSILVTYNFFSPSVRSSSLFLQDVVLPK 167 (439)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~ 167 (439)
...+... .. . .
T Consensus 332 ----------------------------~~~~~~~------~~-----------------------------~------~ 342 (436)
T 4a8c_A 332 ----------------------------DTSTSSS------AS-----------------------------A------E 342 (436)
T ss_pred ----------------------------CCCCccc------cc-----------------------------c------c
Confidence 0000000 00 0 0
Q ss_pred CCCccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHhCCCCeEEEEE
Q psy4596 168 SGPLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALLEPCPEILLKI 247 (439)
Q Consensus 168 ~~~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l~v 247 (439)
.-.+|+......+.... ....|++|..|.++|+|+++| |++||+|++|||+++. ++.++...++...+.+.|+|
T Consensus 343 ~~~~gl~~~~~~~~~~~---~~~~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~--~~~~~~~~l~~~~~~v~l~v 416 (436)
T 4a8c_A 343 MITPALEGATLSDGQLK---DGGKGIKIDEVVKGSPAAQAG-LQKDDVIIGVNRDRVN--SIAEMRKVLAAKPAIIALQI 416 (436)
T ss_pred ccccCceeeeccccccc---CCCCCEEEEEeCCCCHHHHcC-CCCCCEEEEECCEECC--CHHHHHHHHHhCCCeEEEEE
Confidence 00234433332211100 112489999999999999999 9999999999999999 78899988887777899999
Q ss_pred ecCCCC
Q psy4596 248 QHDPHP 253 (439)
Q Consensus 248 ~r~~~~ 253 (439)
.|++..
T Consensus 417 ~R~g~~ 422 (436)
T 4a8c_A 417 VRGNES 422 (436)
T ss_pred EECCEE
Confidence 998754
No 21
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=99.57 E-value=6.8e-16 Score=152.68 Aligned_cols=130 Identities=28% Similarity=0.423 Sum_probs=44.3
Q ss_pred ceeEEe------cCcccc-cCCCCEEEEECCeecCCCCHHHHHHHHhhc--CCeEEEEEEeccccCccccccCCCCCCCC
Q psy4596 15 AGVILA------AGEVVI-HPVGMRLLEVNGMSLLGASHQEAVNTLRYS--GHQISLTVCKGFERGDIERRASTSEGSRS 85 (439)
Q Consensus 15 ~Gi~vs------a~~~~g-L~~GD~Il~VNG~~v~~~~~~~~v~~l~~~--~~~v~L~V~R~~~~~~~~~~~~~~~~~~~ 85 (439)
.|++|+ +|..+| |++||+|++|||+++.+++|.+++.+++.. +..++|+|.|....
T Consensus 232 ~g~~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~~~~~~v~l~v~r~~~~--------------- 296 (388)
T 3suz_A 232 PTVILANMMNGGPAARSGKLSIGDQIMSINGTSLVGLPLATCQGIIKGLKNQTQVKLNIVSCPPV--------------- 296 (388)
T ss_dssp CCCBCCCCCCSSHHHHTCCCCTTCEEEEETTEECSSCCSTTHHHHTTTCTTCSCEEEEEEECCSC---------------
T ss_pred CCEEEEeeCCCCHHHHcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhccCCCcccccccccccc---------------
Confidence 357776 455555 999999999999999999999999999984 45699999883100
Q ss_pred ccccCCCCCcCCCcccccccCccceeeeccccCCCCCCCCCCCCcccccCCCCCcccccccCcCCCCCCCCCceeEEEEE
Q psy4596 86 VTQSMSSLDREDLDTDVFKQGQWSTVVTAHQRLDTGYGLPSNSTVAAHISSSLKPSILVTYNFFSPSVRSSSLFLQDVVL 165 (439)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~v~l 165 (439)
.++.+
T Consensus 297 ---------------------------------------------------------------------------~~v~l 301 (388)
T 3suz_A 297 ---------------------------------------------------------------------------TTVLI 301 (388)
T ss_dssp ---------------------------------------------------------------------------C----
T ss_pred ---------------------------------------------------------------------------ceeeE
Confidence 00001
Q ss_pred e---cCCCccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHhCCCCe
Q psy4596 166 P---KSGPLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALLEPCPE 242 (439)
Q Consensus 166 ~---~~~~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~ 242 (439)
. ..+.|||.+.+ .+|..|.++|+|+++| |++||+|++|||+++.+++|.+++..++..+..
T Consensus 302 ~~~~~~~~lG~~i~~---------------g~I~~V~~gs~A~~aG-L~~GD~Il~VNg~~v~~~s~~~~~~~l~~~~~~ 365 (388)
T 3suz_A 302 KRPDLKYQLGFSVQN---------------GIICSLMRGGIAERGG-VRVGHRIIEINGQSVVATAHEKIVQALSNSVGE 365 (388)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eecCCCCccceEEec---------------CEEEEeecCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCe
Confidence 0 02367887653 3888999999999999 999999999999999999999999999888888
Q ss_pred EEEEEecC
Q psy4596 243 ILLKIQHD 250 (439)
Q Consensus 243 v~l~v~r~ 250 (439)
+.|+|.+.
T Consensus 366 v~L~V~p~ 373 (388)
T 3suz_A 366 IHMKTMPA 373 (388)
T ss_dssp --------
T ss_pred EEEEEEec
Confidence 88887654
No 22
>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.53 E-value=2e-14 Score=116.58 Aligned_cols=101 Identities=52% Similarity=0.934 Sum_probs=86.2
Q ss_pred CCCCcceeeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHH
Q psy4596 252 HPEGFQEITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEA 331 (439)
Q Consensus 252 ~~~~~~~v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~ 331 (439)
.+....++.+.+.....|||++.++.....+.+......+++|..|.++|+|+++|+|++||+|++|||+++.++++.++
T Consensus 6 ~~~~~~~v~l~k~~~~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~ 85 (111)
T 1uju_A 6 SGPGLRELCIQKAPGERLGISIRGGARGHAGNPRDPTDEGIFISKVSPTGAAGRDGRLRVGLRLLEVNQQSLLGLTHGEA 85 (111)
T ss_dssp CSCSSSCEEEECCTTCCCCEEEECCSSSSCSCSSCTTCCCCEEEEECTTSHHHHHSSCCTTCBCCBBSSCBCTTSCHHHH
T ss_pred CCCccEEEEEEECCCCccCEEEECCccccccccccCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHH
Confidence 34445677777777789999999987655555555556799999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCeEEEEEecCCcc
Q psy4596 332 VNTLRYSGHQISLTVCKGFER 352 (439)
Q Consensus 332 ~~~l~~~~~~v~l~v~r~~~~ 352 (439)
+.+|+..+..+.|+|.|.+..
T Consensus 86 ~~~l~~~g~~v~l~v~r~~~~ 106 (111)
T 1uju_A 86 VQLLRSVGDTLTVLVCDGFES 106 (111)
T ss_dssp HHHHSSCSSEEEECCCCCCCC
T ss_pred HHHHHcCCCeEEEEEEECCCC
Confidence 999999889999999987653
No 23
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=99.52 E-value=6.2e-14 Score=141.23 Aligned_cols=157 Identities=14% Similarity=0.175 Sum_probs=104.2
Q ss_pred ceeEEe------cCcccccCCCCEEEEECCeecCCCCHHHHHHHHhhcCCeEEEEEEeccccCccccccCCCCCCCCccc
Q psy4596 15 AGVILA------AGEVVIHPVGMRLLEVNGMSLLGASHQEAVNTLRYSGHQISLTVCKGFERGDIERRASTSEGSRSVTQ 88 (439)
Q Consensus 15 ~Gi~vs------a~~~~gL~~GD~Il~VNG~~v~~~~~~~~v~~l~~~~~~v~L~V~R~~~~~~~~~~~~~~~~~~~~~~ 88 (439)
.|++|. +|..+||++||+|++|||+++.++.+.........+++.|+|+|.|+.+...+......
T Consensus 282 ~G~~V~~V~~~spA~~aGL~~GDvI~~vnG~~v~~~~~l~~~l~~~~~g~~v~l~V~R~g~~~~~~v~l~~--------- 352 (451)
T 3pv2_A 282 QGALVSQVNPNSPAELAGLKAGDIITQINDTKITQATQVKTTISLLRVGSTVKIIVERDNKPLTLSAVVTD--------- 352 (451)
T ss_dssp CCEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSHHHHHHHHHTSCTTCEEEEEEEETTEEEEEEEECBC---------
T ss_pred ceEEEEecCCCChHHHcCCCCCCEEEEECCEEcCCHHHHHHHHHhcCCCCEEEEEEEECCEEEEEEEEEcc---------
Confidence 799997 56677899999999999999998754433333335789999999995432211110000
Q ss_pred cCCCCCcCCCcccccccCccceeeeccccCCCCCCCCCCCCcccccCCCCCcccccccCcCCCCCCCCCceeEEEEEecC
Q psy4596 89 SMSSLDREDLDTDVFKQGQWSTVVTAHQRLDTGYGLPSNSTVAAHISSSLKPSILVTYNFFSPSVRSSSLFLQDVVLPKS 168 (439)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~ 168 (439)
... +.... ... ..
T Consensus 353 ---------~~~-------~~~~~----------------------------------~~~-----------------~~ 365 (451)
T 3pv2_A 353 ---------IKS-------HEQKL----------------------------------QSN-----------------NP 365 (451)
T ss_dssp ---------HHH-------HHHHH----------------------------------HHH-----------------ST
T ss_pred ---------CCc-------ccccc----------------------------------ccc-----------------cc
Confidence 000 00000 000 01
Q ss_pred CCccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHhCCCCeEEEEEe
Q psy4596 169 GPLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALLEPCPEILLKIQ 248 (439)
Q Consensus 169 ~~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l~v~ 248 (439)
..+|+.+......... . ....|++|..|.++|+|+++| |++||+|++|||+++. ++.++..+++..++.+.|+|.
T Consensus 366 ~~~G~~l~~~~~~~~~-~-~~~~Gv~V~~V~~gspA~~aG-L~~GD~I~~Vng~~v~--~~~~~~~~l~~~~~~v~l~v~ 440 (451)
T 3pv2_A 366 FLYGLALRAFEQESPP-H-GNVIGVQVVGASENSAGWRAG-IRPGDIIISANKKPVT--DVKSLQTIAQEKKKELLVQVL 440 (451)
T ss_dssp TTTTEEEEEEEEECTT-S-CEEEEEEEEEECTTSHHHHHT-CCTTCEEEEETTEECC--SHHHHHHHTTSSCSCEEEEEE
T ss_pred cccccccccCChhHhc-c-cCCCceEEEEECCCCHHHHcC-CCCCCEEEEECCEECC--CHHHHHHHHhcCCCeEEEEEE
Confidence 2345554432211100 0 012379999999999999999 9999999999999999 788888888887888999999
Q ss_pred cCCC
Q psy4596 249 HDPH 252 (439)
Q Consensus 249 r~~~ 252 (439)
|++.
T Consensus 441 R~g~ 444 (451)
T 3pv2_A 441 RGPG 444 (451)
T ss_dssp ETTE
T ss_pred ECCE
Confidence 9864
No 24
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.51 E-value=2.4e-13 Score=109.36 Aligned_cols=96 Identities=39% Similarity=0.544 Sum_probs=81.9
Q ss_pred CceeEEEEEecCC-CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhc-CCCCCCCEEEEECCeeCCCCCHHHHHH
Q psy4596 157 SLFLQDVVLPKSG-PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALS-GKLRMGDRILAVNGRDVSKVTHEEAVL 234 (439)
Q Consensus 157 ~~~~~~v~l~~~~-~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~-G~L~~GD~Il~VNg~~v~~~~~~~~~~ 234 (439)
+...++|.|.|.. +|||+|.++.+....++.....|++|..|.++|||+++ | |++||+|++|||.++.+++|.+++.
T Consensus 6 ~~~~~~v~l~k~~~~lG~~i~g~~~~~~~~~~~~~~gv~V~~V~~~spA~~agg-L~~GD~Il~vng~~v~~~~~~~~~~ 84 (107)
T 1uhp_A 6 SGKSLTLVLHRDSGSLGFNIIGGRPSVDNHDGSSSEGIFVSKIVDSGPAAKEGG-LQIHDRIIEVNGRDLSRATHDQAVE 84 (107)
T ss_dssp SSEEEEEEECCSSSCCSEEEECCCSCCCCTTSSCSCCCEEEEECSSSHHHHTTC-CCSSCEEEEETTEECTTCCHHHHHH
T ss_pred CcEEEEEEEEeCCCccCEEEEcCCCCcccccccCCCCEEEEEeCCCChHHHcCC-CCCCCEEEEECCEECCCCCHHHHHH
Confidence 3467889999876 99999999876544444444568999999999999999 7 9999999999999999999999999
Q ss_pred HHhCCCCeEEEEEecCCCC
Q psy4596 235 ALLEPCPEILLKIQHDPHP 253 (439)
Q Consensus 235 ~l~~~~~~v~l~v~r~~~~ 253 (439)
.++..+..+.|+|.|....
T Consensus 85 ~~~~~~~~v~l~v~R~~~~ 103 (107)
T 1uhp_A 85 AFKTAKEPIVVQVLRRTSG 103 (107)
T ss_dssp HHHHCCSSEEEEEEECCSS
T ss_pred HHHcCCCcEEEEEEeCCCC
Confidence 9988888999999887543
No 25
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=99.51 E-value=2.3e-13 Score=108.52 Aligned_cols=94 Identities=43% Similarity=0.701 Sum_probs=81.2
Q ss_pred CceeEEEEEecCC-CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHH
Q psy4596 157 SLFLQDVVLPKSG-PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLA 235 (439)
Q Consensus 157 ~~~~~~v~l~~~~-~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~ 235 (439)
+++.++|.|.+.. +|||++.++.+... .....|++|..|.++|||+++|+|++||+|++|||.++.++++.++...
T Consensus 2 ~~~~~~v~l~k~~~glG~~i~~g~~~~~---~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~ 78 (102)
T 2i1n_A 2 MFKYEEIVLERGNSGLGFSIAGGIDNPH---VPDDPGIFITKIIPGGAAAMDGRLGVNDCVLRVNEVDVSEVVHSRAVEA 78 (102)
T ss_dssp CEEEEEEEEECBTTBTSEEEEECTTSCS---STTCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHH
T ss_pred CceEEEEEEEECCCcCCEEEEcccCCCC---cCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 3577889999877 99999999876432 1234589999999999999999999999999999999999999999988
Q ss_pred HhCCCCeEEEEEecCCCC
Q psy4596 236 LLEPCPEILLKIQHDPHP 253 (439)
Q Consensus 236 l~~~~~~v~l~v~r~~~~ 253 (439)
++..+..+.|+|.|++..
T Consensus 79 ~~~~g~~v~l~v~R~~~~ 96 (102)
T 2i1n_A 79 LKEAGPVVRLVVRRRQPP 96 (102)
T ss_dssp HHHSCSEEEEEEEEECCC
T ss_pred HHcCCCeEEEEEEeCCCC
Confidence 888889999999998765
No 26
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=99.50 E-value=1.5e-13 Score=106.34 Aligned_cols=81 Identities=20% Similarity=0.378 Sum_probs=68.8
Q ss_pred ceeeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHh
Q psy4596 257 QEITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLR 336 (439)
Q Consensus 257 ~~v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~ 336 (439)
.++.+.+. ...|||+|.++. ...+||+.|.++|+|+++|.|++||+|++|||+++.+++|.+++++|+
T Consensus 7 k~V~l~K~-~~~LG~tI~~~g-----------~g~~~I~rI~~gg~a~r~g~L~vGD~I~~VNG~~v~g~~h~evv~lLk 74 (95)
T 3gge_A 7 KEVNVYKS-EDSLGLTITDNG-----------VGYAFIKRIKDGGVIDSVKTICVGDHIESINGENIVGWRHYDVAKKLK 74 (95)
T ss_dssp EEEEEECC-SSCCCEEEECSS-----------SSCCEEEEECTTSHHHHCTTCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred EEEEEEEC-CCCceEEEEcCC-----------CCcEEEEEEcCCChHHhcCCCCCCCEEEEECCEEccCCCHHHHHHHHH
Confidence 34555554 588999998632 235899999999999999999999999999999999999999999999
Q ss_pred c--CCCeEEEEEecC
Q psy4596 337 Y--SGHQISLTVCKG 349 (439)
Q Consensus 337 ~--~~~~v~l~v~r~ 349 (439)
+ .+..++|++++.
T Consensus 75 ~~~~g~~~~L~lv~p 89 (95)
T 3gge_A 75 ELKKEELFTMKLIEP 89 (95)
T ss_dssp HSCTTCEEEEEEEEE
T ss_pred hCCCCCEEEEEEECc
Confidence 9 456889988764
No 27
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=99.49 E-value=1.5e-13 Score=112.37 Aligned_cols=87 Identities=32% Similarity=0.543 Sum_probs=74.5
Q ss_pred eeeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhc
Q psy4596 258 EITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRY 337 (439)
Q Consensus 258 ~v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~ 337 (439)
.+.+.+....+|||++.++.... ....+++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+|+.
T Consensus 27 ~v~l~k~~~~~lGf~i~gg~~~~------~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~ 100 (118)
T 3b76_A 27 VVNIQKDPGESLGMTVAGGASHR------EWDLPIYVISVEPGGVISRDGRIKTGDILLNVDGVELTEVSRSEAVALLKR 100 (118)
T ss_dssp EEEEECCTTCCCCEEEEECSCST------TCCCCEEEEEECTTSHHHHHCSSCTTCEEEEETTEEGGGSCHHHHHHHHHS
T ss_pred EEEEEeCCCCccCEEEecCCCCC------CCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 45555555688999999875321 224589999999999999999999999999999999999999999999999
Q ss_pred CCCeEEEEEecCC
Q psy4596 338 SGHQISLTVCKGF 350 (439)
Q Consensus 338 ~~~~v~l~v~r~~ 350 (439)
++..+.|+|.|..
T Consensus 101 ~~~~v~L~v~R~~ 113 (118)
T 3b76_A 101 TSSSIVLKALEVK 113 (118)
T ss_dssp CCSEEEEEEEEEE
T ss_pred CCCeEEEEEEECC
Confidence 9999999998753
No 28
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=99.49 E-value=4.7e-13 Score=104.93 Aligned_cols=91 Identities=38% Similarity=0.626 Sum_probs=77.4
Q ss_pred ceeEEEEEecCC-CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHH
Q psy4596 158 LFLQDVVLPKSG-PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLAL 236 (439)
Q Consensus 158 ~~~~~v~l~~~~-~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l 236 (439)
++.++|+|.|.. +|||++.++.+.... ....|++|..|.++|||+++|+|++||+|++|||.++.++++.++...+
T Consensus 2 ~~~~~v~l~k~~~g~G~~i~gg~~~~~~---~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~ 78 (94)
T 2fe5_A 2 MTIMEVNLLKGPKGLGFSIAGGIGNQHI---PGDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASL 78 (94)
T ss_dssp CCEEEEEEECCTTCSCEEEEECBTSCSB---TTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHH
T ss_pred cEEEEEEEEECCCCCCEEEEcccCCCCC---CCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 357889998876 999999987654321 1234899999999999999999999999999999999999999999888
Q ss_pred hCCCCeEEEEEecCC
Q psy4596 237 LEPCPEILLKIQHDP 251 (439)
Q Consensus 237 ~~~~~~v~l~v~r~~ 251 (439)
+..+..+.|+|.|++
T Consensus 79 ~~~~~~v~l~v~R~g 93 (94)
T 2fe5_A 79 KNTSDMVYLKVAKPG 93 (94)
T ss_dssp HTCCSEEEEEEECCC
T ss_pred HcCCCeEEEEEEcCC
Confidence 877788999998864
No 29
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=99.47 E-value=6.2e-13 Score=106.59 Aligned_cols=92 Identities=39% Similarity=0.618 Sum_probs=78.6
Q ss_pred eeEEEEEecCC-CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHh
Q psy4596 159 FLQDVVLPKSG-PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALL 237 (439)
Q Consensus 159 ~~~~v~l~~~~-~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~ 237 (439)
...+|.|.|.. +|||++.++.+....+ ...|++|..|.++|+|+++|+|++||+|++|||.++.++++.+++..++
T Consensus 3 ~~~~v~l~k~~~glG~~i~gg~~~~~~~---~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~ 79 (105)
T 2awx_A 3 KIMEIKLIKGPKGLGFSIAGGVGNQHIP---GDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNSVSLEEVTHEEAVTALK 79 (105)
T ss_dssp CEEEEEEECBTTBSSEEEEECBTSCSBT---TBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHH
T ss_pred eEEEEEEEECCCCCCEEEeCccCCCCCC---CCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 46788998876 9999999986543211 2348999999999999999999999999999999999999999999998
Q ss_pred CCCCeEEEEEecCCCC
Q psy4596 238 EPCPEILLKIQHDPHP 253 (439)
Q Consensus 238 ~~~~~v~l~v~r~~~~ 253 (439)
..+..+.|+|.|++..
T Consensus 80 ~~~~~v~l~v~R~~~~ 95 (105)
T 2awx_A 80 NTSDFVYLKVAKPTSM 95 (105)
T ss_dssp SCCSEEEEEEECCCC-
T ss_pred cCCCeEEEEEEcCCCC
Confidence 8888999999998754
No 30
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=99.47 E-value=7e-13 Score=106.41 Aligned_cols=91 Identities=42% Similarity=0.638 Sum_probs=76.4
Q ss_pred CCccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHhCCCCeEEEEEe
Q psy4596 169 GPLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALLEPCPEILLKIQ 248 (439)
Q Consensus 169 ~~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l~v~ 248 (439)
.+|||+|.++.+....+ ...|++|..|.++|||+++|+|++||+|++|||.++.+++|.+++..++..+..+.|+|.
T Consensus 13 ~~~Gf~i~gG~~~~~~~---~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~v~l~v~ 89 (106)
T 4amh_A 13 KGLGFSIAGGVGNQHWP---GDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNNVALEEVTHEEAVTALKNTSDFVYLKVA 89 (106)
T ss_dssp CCSCEEEEECTTSCSBT---TBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHSCCSEEEEEEE
T ss_pred CccCEEEEeccCCcccc---CCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEEEEEE
Confidence 49999999987654321 234899999999999999999999999999999999999999999999988889999999
Q ss_pred cCCCCCCcceeeee
Q psy4596 249 HDPHPEGFQEITLI 262 (439)
Q Consensus 249 r~~~~~~~~~v~l~ 262 (439)
|++....+.++.+.
T Consensus 90 R~~~~~~~~~v~l~ 103 (106)
T 4amh_A 90 KPGSGEKIMEIKLI 103 (106)
T ss_dssp CCSSSCSEEEEEEE
T ss_pred eCCCCCeEEEEEEe
Confidence 98765444444443
No 31
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=99.46 E-value=3.8e-13 Score=107.96 Aligned_cols=87 Identities=36% Similarity=0.590 Sum_probs=71.9
Q ss_pred eeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCC
Q psy4596 261 LIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRYSGH 340 (439)
Q Consensus 261 l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~ 340 (439)
..+.....|||+|.+|... ...+...+++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+++..+.
T Consensus 7 ~~~~~~~~~Gf~i~gG~~~----~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~ 82 (106)
T 4amh_A 7 LVPRGSKGLGFSIAGGVGN----QHWPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNNVALEEVTHEEAVTALKNTSD 82 (106)
T ss_dssp -----CCCSCEEEEECTTS----CSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHSCCS
T ss_pred cCCCCCCccCEEEEeccCC----ccccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCC
Confidence 3445678899999988632 222234589999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEecCCc
Q psy4596 341 QISLTVCKGFE 351 (439)
Q Consensus 341 ~v~l~v~r~~~ 351 (439)
.+.|+|.|...
T Consensus 83 ~v~l~v~R~~~ 93 (106)
T 4amh_A 83 FVYLKVAKPGS 93 (106)
T ss_dssp EEEEEEECCSS
T ss_pred eEEEEEEeCCC
Confidence 99999998753
No 32
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=99.45 E-value=1.3e-12 Score=102.78 Aligned_cols=90 Identities=33% Similarity=0.592 Sum_probs=77.8
Q ss_pred eeEEEEEecCC-CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHh
Q psy4596 159 FLQDVVLPKSG-PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALL 237 (439)
Q Consensus 159 ~~~~v~l~~~~-~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~ 237 (439)
+.++|.|.+.+ +|||++.++.+... ...|++|..|.++|||+++|+|++||+|++|||.++.++++.++...++
T Consensus 5 ~~~~v~l~k~~~~lG~~i~~g~~~~~-----~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~ 79 (96)
T 1d5g_A 5 DIFEVELAKNDNSLGISVTGGVNTSV-----RHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLR 79 (96)
T ss_dssp CEEEEEEECSSSSCCEEEECCSSSCS-----SSSCCEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred CEEEEEEEeCCCCCCEEEECCCCCCC-----CcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 56788888877 99999998755321 2348999999999999999999999999999999999999999998888
Q ss_pred CCCCeEEEEEecCCCC
Q psy4596 238 EPCPEILLKIQHDPHP 253 (439)
Q Consensus 238 ~~~~~v~l~v~r~~~~ 253 (439)
..+..+.|+|.|++.+
T Consensus 80 ~~g~~v~l~v~R~~~~ 95 (96)
T 1d5g_A 80 NTGQVVHLLLEKGQSP 95 (96)
T ss_dssp SCCSEEEEEEECCSCC
T ss_pred cCCCeEEEEEEcCCCC
Confidence 8888999999987654
No 33
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=99.45 E-value=9.2e-13 Score=103.52 Aligned_cols=87 Identities=34% Similarity=0.558 Sum_probs=76.0
Q ss_pred ceeEEEEEecC---CCccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHH
Q psy4596 158 LFLQDVVLPKS---GPLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVL 234 (439)
Q Consensus 158 ~~~~~v~l~~~---~~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~ 234 (439)
++..+|.|.|. .+|||++.+..+ ..|++|..|.++|||+++|+|++||+|++|||.++.++++.++..
T Consensus 2 ~~~~~v~l~k~~~~~~lG~~~~~~~~---------~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~ 72 (95)
T 2vwr_A 2 MEILQVALHKRDSGEQLGIKLVRRTD---------EPGVFILDLLEGGLAAQDGRLSSNDRVLAINGHDLKYGTPELAAQ 72 (95)
T ss_dssp EEEEEEEEECSSTTCCCCEEEEECSS---------SCSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHH
T ss_pred cEEEEEEEEECCCCCcccEEEEeccC---------CCCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 46778999985 279999987654 248999999999999999999999999999999999999999998
Q ss_pred HHhCCCCeEEEEEecCCCC
Q psy4596 235 ALLEPCPEILLKIQHDPHP 253 (439)
Q Consensus 235 ~l~~~~~~v~l~v~r~~~~ 253 (439)
.++..+..+.|+|.|++..
T Consensus 73 ~~~~~g~~v~l~v~R~~~~ 91 (95)
T 2vwr_A 73 IIQASGERVNLTIARPGKP 91 (95)
T ss_dssp HHHHCCSEEEEEEEEESCS
T ss_pred HHHcCCCEEEEEEEcCCcC
Confidence 8887889999999997653
No 34
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=99.45 E-value=1.4e-12 Score=103.62 Aligned_cols=92 Identities=36% Similarity=0.653 Sum_probs=78.5
Q ss_pred eeEEEEEecCC-CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHh
Q psy4596 159 FLQDVVLPKSG-PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALL 237 (439)
Q Consensus 159 ~~~~v~l~~~~-~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~ 237 (439)
..+.|.|.+.. +|||++.++.+.... ....|++|..|.++|+|+++|+|++||+|++|||.++.++++.++...++
T Consensus 7 ~~~~v~l~~~~~~lG~~l~~g~~~~~~---~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~ 83 (101)
T 2jik_A 7 TEEEINLTRGPSGLGFNIVGGTDQQYV---SNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFR 83 (101)
T ss_dssp EEEEEEEECCTTCCCEEEEECTTSCSB---TTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHH
T ss_pred ccEEEEEEeCCCCCCEEEeccccCCCc---cCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 56889999876 999999997664321 12348999999999999999999999999999999999999999998888
Q ss_pred CCCCeEEEEEecCCCC
Q psy4596 238 EPCPEILLKIQHDPHP 253 (439)
Q Consensus 238 ~~~~~v~l~v~r~~~~ 253 (439)
..+..+.|+|.|++..
T Consensus 84 ~~g~~v~l~v~R~~~~ 99 (101)
T 2jik_A 84 NAGYAVSLRVQHRLES 99 (101)
T ss_dssp TCCSEEEEEEEEESCC
T ss_pred hCCCeEEEEEEeCCCC
Confidence 8888899999987653
No 35
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=99.45 E-value=1.9e-13 Score=112.31 Aligned_cols=90 Identities=28% Similarity=0.518 Sum_probs=72.2
Q ss_pred cceeeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHH
Q psy4596 256 FQEITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTL 335 (439)
Q Consensus 256 ~~~v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l 335 (439)
...+.+.+....+|||+|.++..... ...++||..|.++|||+++|.|++||+|++|||.++.+++|.+++.+|
T Consensus 25 ~~~v~l~k~~~~~lGf~i~gg~~~~~------~~~~~~V~~V~~~spA~~aggL~~GD~Il~VnG~~v~~~~~~~~~~~l 98 (120)
T 2iwo_A 25 LRTVEMKKGPTDSLGISIAGGVGSPL------GDVPIFIAMMHPTGVAAQTQKLRVGDRIVTICGTSTEGMTHTQAVNLL 98 (120)
T ss_dssp CEEEEEEC----CCCEEEEEEEEETT------EEEEEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCBHHHHHHHH
T ss_pred cEEEEEEcCCCCCCCEEEecccCCCC------CCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 35566666666789999998652111 134799999999999999933999999999999999999999999999
Q ss_pred hcCCCeEEEEEecCCc
Q psy4596 336 RYSGHQISLTVCKGFE 351 (439)
Q Consensus 336 ~~~~~~v~l~v~r~~~ 351 (439)
+..+..++|+|.|...
T Consensus 99 ~~~~~~v~l~v~r~g~ 114 (120)
T 2iwo_A 99 KNASGSIEMQVVAGGD 114 (120)
T ss_dssp HHCCSEEEEEEECCTT
T ss_pred HcCCCeEEEEEEECCc
Confidence 9999999999998754
No 36
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=99.44 E-value=1.3e-12 Score=102.56 Aligned_cols=90 Identities=32% Similarity=0.445 Sum_probs=75.7
Q ss_pred eEEEEEecCCCccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHhCC
Q psy4596 160 LQDVVLPKSGPLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALLEP 239 (439)
Q Consensus 160 ~~~v~l~~~~~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~ 239 (439)
..+|.+.+..+|||+|.++.+....++.....|++|..|.++|||++ | |++||+|++|||.++.++++.+++..++..
T Consensus 4 ~~~v~l~~~~~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~-g-L~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 81 (95)
T 1mfg_A 4 EIRVRVEKDPELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-L-LQPGDKIIQANGYSFINIEHGQAVSLLKTF 81 (95)
T ss_dssp EEEEEEECSSSCSEEEEECBTSCCCSSSTTCCCEEEEEECTTSTTTT-T-CCTTCEEEEETTEECTTCBHHHHHHHHHHC
T ss_pred EEEEEECCCCCCCEEEeCCcCccCCccccCCCCEEEEEECCCCchhh-C-CCCCCEEEEECCEEcCCCCHHHHHHHhhcC
Confidence 45677888779999999876533333333456899999999999999 9 999999999999999999999999888878
Q ss_pred CCeEEEEEecCC
Q psy4596 240 CPEILLKIQHDP 251 (439)
Q Consensus 240 ~~~v~l~v~r~~ 251 (439)
+..+.|+|.|+.
T Consensus 82 ~~~v~l~v~R~~ 93 (95)
T 1mfg_A 82 QNTVELIIVREV 93 (95)
T ss_dssp CSEEEEEEEEEC
T ss_pred CCeEEEEEEeCC
Confidence 899999999864
No 37
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.44 E-value=9.8e-13 Score=105.80 Aligned_cols=91 Identities=32% Similarity=0.537 Sum_probs=74.5
Q ss_pred eeeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhc-CCCCCCCEEEEECCEEcCCCCHHHHHHHHh
Q psy4596 258 EITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRD-GRLKVGMRLLEVNGMSLLGASHQEAVNTLR 336 (439)
Q Consensus 258 ~v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~-G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~ 336 (439)
++.+.+. ...|||+|.++.. ..+........++||..|.++|||+++ | |++||+|++|||+++.+++|.+++.+++
T Consensus 11 ~v~l~k~-~~~lG~~i~g~~~-~~~~~~~~~~~gv~V~~V~~~spA~~agg-L~~GD~Il~vng~~v~~~~~~~~~~~~~ 87 (107)
T 1uhp_A 11 TLVLHRD-SGSLGFNIIGGRP-SVDNHDGSSSEGIFVSKIVDSGPAAKEGG-LQIHDRIIEVNGRDLSRATHDQAVEAFK 87 (107)
T ss_dssp EEEECCS-SSCCSEEEECCCS-CCCCTTSSCSCCCEEEEECSSSHHHHTTC-CCSSCEEEEETTEECTTCCHHHHHHHHH
T ss_pred EEEEEeC-CCccCEEEEcCCC-CcccccccCCCCEEEEEeCCCChHHHcCC-CCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 3444443 6789999998653 222333334568999999999999999 6 9999999999999999999999999999
Q ss_pred cCCCeEEEEEecCCc
Q psy4596 337 YSGHQISLTVCKGFE 351 (439)
Q Consensus 337 ~~~~~v~l~v~r~~~ 351 (439)
..+..+.|+|.|..+
T Consensus 88 ~~~~~v~l~v~R~~~ 102 (107)
T 1uhp_A 88 TAKEPIVVQVLRRTS 102 (107)
T ss_dssp HCCSSEEEEEEECCS
T ss_pred cCCCcEEEEEEeCCC
Confidence 989999999998754
No 38
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.44 E-value=7.8e-13 Score=108.19 Aligned_cols=95 Identities=27% Similarity=0.440 Sum_probs=76.8
Q ss_pred ceeeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHh
Q psy4596 257 QEITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLR 336 (439)
Q Consensus 257 ~~v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~ 336 (439)
..+.+.+.....|||+|.++.....-........+++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+++
T Consensus 17 ~~v~l~k~~~~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~ 96 (117)
T 2ehr_A 17 RIVEIFREPNVSLGISIVGGQTVIKRLKNGEELKGIFIKQVLEDSPAGKTNALKTGDKILEVSGVDLQNASHSEAVEAIK 96 (117)
T ss_dssp EEEEECCCSSSCCCEEECCCCSCCCSSCCCSCCCSEEEEEECSSSTTTSSCSCCTTCEEEEESSCBCTTCCHHHHHHHHH
T ss_pred EEEEEEeCCCCccCEEEeCCcccccccccCCCcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 44566666678899999887532211111123468999999999999999999999999999999999999999999999
Q ss_pred cCCCeEEEEEecCCc
Q psy4596 337 YSGHQISLTVCKGFE 351 (439)
Q Consensus 337 ~~~~~v~l~v~r~~~ 351 (439)
..+..+.|+|.|...
T Consensus 97 ~~g~~v~l~v~r~~~ 111 (117)
T 2ehr_A 97 NAGNPVVFIVQSLSS 111 (117)
T ss_dssp TSCSSEEEEECCBSC
T ss_pred cCCCeEEEEEEECCC
Confidence 999999999987643
No 39
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=99.44 E-value=1.5e-12 Score=101.20 Aligned_cols=84 Identities=31% Similarity=0.448 Sum_probs=74.1
Q ss_pred eeEEEEEecCC-CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHh
Q psy4596 159 FLQDVVLPKSG-PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALL 237 (439)
Q Consensus 159 ~~~~v~l~~~~-~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~ 237 (439)
..+.|.|.+.. +|||++.+..+ ..|++|..|.++|||+++| |++||+|++|||.++.++++.++...++
T Consensus 4 ~~r~v~l~k~~~g~G~~~~~~~~---------~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~ 73 (90)
T 2he4_A 4 RPRLCHLRKGPQGYGFNLHSDKS---------RPGQYIRSVDPGSPAARSG-LRAQDRLIEVNGQNVEGLRHAEVVASIK 73 (90)
T ss_dssp CCEEEEEECBTTBCCEEEEECSS---------SSSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTSCHHHHHHHHT
T ss_pred CcEEEEEEECCCCccEEEEccCC---------CCCEEEEEECCCChHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 45788999876 99999998653 2379999999999999999 9999999999999999999999999998
Q ss_pred CCCCeEEEEEecCCC
Q psy4596 238 EPCPEILLKIQHDPH 252 (439)
Q Consensus 238 ~~~~~v~l~v~r~~~ 252 (439)
..+..+.|+|.|...
T Consensus 74 ~~~~~v~l~v~r~~~ 88 (90)
T 2he4_A 74 AREDEARLLVVGPST 88 (90)
T ss_dssp TSSSEEEEEEECCCC
T ss_pred cCCCcEEEEEEccCC
Confidence 878899999998753
No 40
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.44 E-value=1.7e-12 Score=104.72 Aligned_cols=89 Identities=22% Similarity=0.429 Sum_probs=76.2
Q ss_pred eeEEEEEecCCCccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHhC
Q psy4596 159 FLQDVVLPKSGPLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALLE 238 (439)
Q Consensus 159 ~~~~v~l~~~~~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~ 238 (439)
..+.|.+.|..+|||+|.++.+... ..+++|..|.++|+|+++|+|++||+|++|||.++.+++|.+++..|+.
T Consensus 15 ~~~~v~l~k~~glG~~i~gg~~~~~------~~~~~V~~v~~~s~A~~aG~l~~GD~Il~Vng~~~~~~~~~~~~~~l~~ 88 (109)
T 1wi4_A 15 AFRVITVTKETGLGLKILGGINRNE------GPLVYIHEVIPGGDCYKDGRLKPGDQLVSINKESMIGVSFEEAKSIITR 88 (109)
T ss_dssp TEEEEEECCSSCCCEEEEECSSSSS------CSSEEEEEECTTSHHHHHCSCCTTCBEEEETTSCCTTCCHHHHHHHHHH
T ss_pred cEEEEEEeCCCccCEEEEeccCCCC------CCCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 5678899887899999999865321 2379999999999999999999999999999999999999999999875
Q ss_pred C----CCeEEEEEecCCCC
Q psy4596 239 P----CPEILLKIQHDPHP 253 (439)
Q Consensus 239 ~----~~~v~l~v~r~~~~ 253 (439)
. +..+.|.+.|++..
T Consensus 89 ~~~r~~~~~~l~v~R~~~~ 107 (109)
T 1wi4_A 89 AKLRSESPWEIAFIRSGPS 107 (109)
T ss_dssp SCCSSSSCEEEEEECCCCC
T ss_pred cccCCCceEEEEEEeCCCC
Confidence 3 57788888887643
No 41
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.44 E-value=6.7e-13 Score=108.54 Aligned_cols=87 Identities=21% Similarity=0.324 Sum_probs=74.0
Q ss_pred ceeeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHh
Q psy4596 257 QEITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLR 336 (439)
Q Consensus 257 ~~v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~ 336 (439)
..+.+.+.....|||.+.++... ...++||..|.++|||+++|+|++||+|++|||+++.++++++++++|+
T Consensus 17 ~~v~l~k~~~~~lG~~i~~~~~~--------~~~~~~V~~V~~~spA~~aG~l~~GD~Il~Ing~~v~~~~~~~~~~~l~ 88 (117)
T 1v62_A 17 LMVEIVKTPGSALGISLTTTSLR--------NKSVITIDRIKPASVVDRSGALHPGDHILSIDGTSMEHCSLLEATKLLA 88 (117)
T ss_dssp EEEEEECCTTCCCCCEEEEECCS--------SSCEEEEEECCTTSHHHHHTCCCTTCBEEEETTEETTSCCHHHHHHHHH
T ss_pred EEEEEEcCCCCcccEEEEccCCC--------CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 45666666667899999875311 1235999999999999999999999999999999999999999999999
Q ss_pred cCCCeEEEEEecCCc
Q psy4596 337 YSGHQISLTVCKGFE 351 (439)
Q Consensus 337 ~~~~~v~l~v~r~~~ 351 (439)
..+..+.|+|.|...
T Consensus 89 ~~g~~v~l~v~r~~~ 103 (117)
T 1v62_A 89 SISEKVRLEILPVPQ 103 (117)
T ss_dssp SCSSEEEEEECCBTT
T ss_pred hCCCeEEEEEEECCC
Confidence 989999999998654
No 42
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=99.43 E-value=3.3e-13 Score=107.78 Aligned_cols=86 Identities=33% Similarity=0.522 Sum_probs=73.3
Q ss_pred ceeeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhc-CCCCCCCEEEEECCEEcCCCCHHHHHHHH
Q psy4596 257 QEITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRD-GRLKVGMRLLEVNGMSLLGASHQEAVNTL 335 (439)
Q Consensus 257 ~~v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~-G~L~~GD~Il~VNg~~v~~~~~~~~~~~l 335 (439)
.++.+.+....+|||++.++.. ...+++|..|.++|||+++ | |++||+|++|||+++.++++.+++.+|
T Consensus 11 ~~v~l~~~~~~~lG~~l~~g~~---------~~~~~~V~~V~~~s~A~~a~g-L~~GD~Il~Ing~~v~~~~~~~~~~~l 80 (103)
T 2dc2_A 11 RKVLLLKEDHEGLGISITGGKE---------HGVPILISEIHPGQPADRCGG-LHVGDAILAVNGVNLRDTKHKEAVTIL 80 (103)
T ss_dssp EEEEEECCSSSCCCEEEEEEGG---------GTEEEEEEEECTTSHHHHHTC-CCSSEEEEEETTEESTTSCHHHHHHHH
T ss_pred EEEEEEeCCCCccCEEEEeccC---------CCCCEEEEEECCCCHHHHhCC-CCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 4566666777899999987642 1237999999999999996 7 999999999999999999999999999
Q ss_pred hcCCCeEEEEEecCCcc
Q psy4596 336 RYSGHQISLTVCKGFER 352 (439)
Q Consensus 336 ~~~~~~v~l~v~r~~~~ 352 (439)
+.++..+.|++.+.+..
T Consensus 81 ~~~~~~v~l~v~~~~~~ 97 (103)
T 2dc2_A 81 SQQRGEIEFEVVYVALE 97 (103)
T ss_dssp HHCCSEEEEEEEECC--
T ss_pred HhCCCcEEEEEEecCCc
Confidence 99989999999987543
No 43
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=99.43 E-value=7.8e-13 Score=102.59 Aligned_cols=85 Identities=31% Similarity=0.477 Sum_probs=73.5
Q ss_pred eeEEEEEecCCCccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHhC
Q psy4596 159 FLQDVVLPKSGPLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALLE 238 (439)
Q Consensus 159 ~~~~v~l~~~~~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~ 238 (439)
+..++.+...++|||++.++.+. ..|++|..|.++|||+++| |++||+|++|||.++.++++.++...++.
T Consensus 3 ~~~~v~~~~~~~~G~~l~gg~~~--------~~~v~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~ 73 (89)
T 2q3g_A 3 DSFKVVLEGPAPWGFRLQGGKDF--------NVPLSISRLTPGGKAAQAG-VAVGDWVLSIDGENAGSLTHIEAQNKIRA 73 (89)
T ss_dssp EEEEEEEESSSCCCEEEEEEGGG--------TEEEEEEEECTTSHHHHTT-CCTTCEEEEETTEEGGGCCHHHHHHHHHT
T ss_pred cEEEEEEcCCCcccEEEECcCCC--------CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 45667777667999999886542 2379999999999999999 99999999999999999999999988887
Q ss_pred CCCeEEEEEecCCC
Q psy4596 239 PCPEILLKIQHDPH 252 (439)
Q Consensus 239 ~~~~v~l~v~r~~~ 252 (439)
.+..+.|+|.|++.
T Consensus 74 ~g~~v~l~v~R~~~ 87 (89)
T 2q3g_A 74 CGERLSLGLSRAIT 87 (89)
T ss_dssp CTTEEEEEEEEECC
T ss_pred CCCEEEEEEEeCCC
Confidence 88889999998754
No 44
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=99.43 E-value=1.3e-12 Score=106.82 Aligned_cols=90 Identities=37% Similarity=0.593 Sum_probs=77.2
Q ss_pred eeEEEEEecCC-CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHh
Q psy4596 159 FLQDVVLPKSG-PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALL 237 (439)
Q Consensus 159 ~~~~v~l~~~~-~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~ 237 (439)
..+.|.|.+.. +|||+|.++.+.... ....|++|..|.++|+|+++|+|++||+|++|||.++.++++.+++..++
T Consensus 24 ~~~~v~l~k~~~glG~~i~gg~~~~~~---~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 100 (117)
T 2byg_A 24 TVVEIKLFKGPKGLGFSIAGGVGNQHI---PGDNSIYVTKIIDGGAAQKDGRLQVGDRLLMVNNYSLEEVTHEEAVAILK 100 (117)
T ss_dssp EEEEEEEECBTTBSSEEEEECTTSCSB---TTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred ceEEEEEEeCCCCcCEEEEcccCCCCc---cCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 56778888766 999999987654321 12348999999999999999999999999999999999999999999999
Q ss_pred CCCCeEEEEEecCC
Q psy4596 238 EPCPEILLKIQHDP 251 (439)
Q Consensus 238 ~~~~~v~l~v~r~~ 251 (439)
..+..+.|+|.|++
T Consensus 101 ~~g~~v~l~v~R~~ 114 (117)
T 2byg_A 101 NTSEVVYLKVGKPT 114 (117)
T ss_dssp TCCSEEEEEEEEEE
T ss_pred cCCCeEEEEEEeCC
Confidence 88889999999864
No 45
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=99.43 E-value=7.3e-13 Score=102.50 Aligned_cols=82 Identities=21% Similarity=0.384 Sum_probs=70.2
Q ss_pred ceeeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhh-cCCCCCCCEEEEECCEEcCCCCHHHHHHHH
Q psy4596 257 QEITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKR-DGRLKVGMRLLEVNGMSLLGASHQEAVNTL 335 (439)
Q Consensus 257 ~~v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~-~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l 335 (439)
+.+.+.+.....|||++.+.. ..+++|..|.++|||++ +| |++||+|++|||+++.+++|++++++|
T Consensus 3 r~V~l~K~~~~~lG~~i~~~~-----------~~~~~I~~V~~gspA~~~ag-L~~GD~I~~Ing~~v~~~~~~~~~~~l 70 (88)
T 1kwa_A 3 RLVQFQKNTDEPMGITLKMNE-----------LNHCIVARIMHGGMIHRQGT-LHVGDEIREINGISVANQTVEQLQKML 70 (88)
T ss_dssp EEEEEEECSSSCCCEEEECSC-----------GGGEEEEEECTTSHHHHHTC-CCTTCEEEEETTEEGGGSCHHHHHHHH
T ss_pred EEEEEEeCCCCceeEEEEeCC-----------CCCEEEEEECCCCHHHHcCC-CCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 345666666788999998632 23799999999999999 66 999999999999999999999999999
Q ss_pred hcCCCeEEEEEecCC
Q psy4596 336 RYSGHQISLTVCKGF 350 (439)
Q Consensus 336 ~~~~~~v~l~v~r~~ 350 (439)
+.....+.|+|.|..
T Consensus 71 ~~~~~~v~l~v~r~~ 85 (88)
T 1kwa_A 71 REMRGSITFKIVPSY 85 (88)
T ss_dssp HHCCEEEEEEEECCC
T ss_pred hcCCCcEEEEEECCc
Confidence 987679999998864
No 46
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=99.43 E-value=9.3e-13 Score=102.82 Aligned_cols=83 Identities=36% Similarity=0.538 Sum_probs=72.1
Q ss_pred eeeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhc
Q psy4596 258 EITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRY 337 (439)
Q Consensus 258 ~v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~ 337 (439)
++.+.+.....|||++.++. ...+++|..|.++|||+++|+|++||+|++|||+++.++++.++..+++.
T Consensus 7 ~v~l~k~~~~~lG~~~~~~~----------~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~ 76 (92)
T 2qg1_A 7 TIGLQKKPGKGLGLSIVGKR----------NDTGVFVSDIVKGGIADADGRLMQGDQILMVNGEDVRNATQEAVAALLKC 76 (92)
T ss_dssp EEEEECCTTSCCSEEEECCS----------SSCSCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHH
T ss_pred EEEEEeCCCCcccEEEEecc----------CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 45555555678999998753 13489999999999999999999999999999999999999999999998
Q ss_pred CCCeEEEEEecCC
Q psy4596 338 SGHQISLTVCKGF 350 (439)
Q Consensus 338 ~~~~v~l~v~r~~ 350 (439)
.+..+.|+|.|..
T Consensus 77 ~~~~v~l~v~R~~ 89 (92)
T 2qg1_A 77 SLGTVTLEVGRIS 89 (92)
T ss_dssp CCSEEEEEEECCC
T ss_pred CCCeEEEEEEccc
Confidence 8899999998863
No 47
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=99.43 E-value=1.3e-12 Score=103.07 Aligned_cols=91 Identities=33% Similarity=0.486 Sum_probs=77.3
Q ss_pred eeEEEEEecCC-CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHh
Q psy4596 159 FLQDVVLPKSG-PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALL 237 (439)
Q Consensus 159 ~~~~v~l~~~~-~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~ 237 (439)
...+|.|.+.+ +|||++.++.+... ....|++|..|.++|||+++|+|++||+|++|||.++.++++.++...++
T Consensus 3 ~~~~v~l~k~~~~lG~~i~~~~~~~~----~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~ 78 (97)
T 2jil_A 3 RTVEVTLHKEGNTFGFVIRGGAHDDR----NKSRPVVITSVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILK 78 (97)
T ss_dssp EEEEEEEECBTTBCSEEEEEECCSCC------CEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHH
T ss_pred eEEEEEEEeCCCccCEEEeCcccCCC----CCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 56778888876 99999998754321 11348999999999999999999999999999999999888999999888
Q ss_pred CCCCeEEEEEecCCCC
Q psy4596 238 EPCPEILLKIQHDPHP 253 (439)
Q Consensus 238 ~~~~~v~l~v~r~~~~ 253 (439)
..+..+.|+|.|++..
T Consensus 79 ~~g~~v~l~v~R~~~~ 94 (97)
T 2jil_A 79 QCGQEAALLIEYDVSE 94 (97)
T ss_dssp HSCSEEEEEEEEECCC
T ss_pred cCCCeEEEEEEeCCCc
Confidence 8888999999998754
No 48
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=99.43 E-value=6.4e-13 Score=107.03 Aligned_cols=89 Identities=28% Similarity=0.459 Sum_probs=75.3
Q ss_pred eeEEEEEecC--CCccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHH
Q psy4596 159 FLQDVVLPKS--GPLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLAL 236 (439)
Q Consensus 159 ~~~~v~l~~~--~~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l 236 (439)
+.++|.|.+. .+|||++.++.+.. ...|++|..|.++|||+++|+|++||+|++|||+++.+++|.+++..+
T Consensus 5 ~~~~v~l~k~~~~~lG~~i~g~~~~~------~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l 78 (108)
T 3cbz_A 5 NIITVTLNMEKYNFLGISIVGQSNER------GDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDMNFENMSNDDAVRVL 78 (108)
T ss_dssp CEEEEEECHHHHCCCCEEEEEECSST------TCCEEEEEEECTTSHHHHHCCCCTTCEEEEETTEETTSCCHHHHHHHH
T ss_pred eEEEEEEEeCCCCccCEEEEcCcCCC------CCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 5678899874 49999999875421 245899999999999999999999999999999999999999999988
Q ss_pred hCC---CCeEEEEEecCCCC
Q psy4596 237 LEP---CPEILLKIQHDPHP 253 (439)
Q Consensus 237 ~~~---~~~v~l~v~r~~~~ 253 (439)
+.. ...+.|+|.|...+
T Consensus 79 ~~~~~~~~~v~l~v~R~~~~ 98 (108)
T 3cbz_A 79 RDIVHKPGPIVLTVAKSGGG 98 (108)
T ss_dssp HHHHTSSSCEEEEEECCCC-
T ss_pred HhcccCCCeEEEEEEeCCCC
Confidence 754 45799999997654
No 49
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=99.43 E-value=3.8e-13 Score=108.37 Aligned_cols=87 Identities=37% Similarity=0.489 Sum_probs=73.0
Q ss_pred eeeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhc
Q psy4596 258 EITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRY 337 (439)
Q Consensus 258 ~v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~ 337 (439)
++.+.+.....|||++.++... ....++||.+|.++|||+++|+|++||+|++|||+++.+++|.+++.+|+.
T Consensus 8 ~v~l~k~~~~~lG~~i~g~~~~-------~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 80 (108)
T 3cbz_A 8 TVTLNMEKYNFLGISIVGQSNE-------RGDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDMNFENMSNDDAVRVLRD 80 (108)
T ss_dssp EEEECHHHHCCCCEEEEEECSS-------TTCCEEEEEEECTTSHHHHHCCCCTTCEEEEETTEETTSCCHHHHHHHHHH
T ss_pred EEEEEeCCCCccCEEEEcCcCC-------CCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 4555555567899999886421 124589999999999999999999999999999999999999999999998
Q ss_pred C---CCeEEEEEecCCc
Q psy4596 338 S---GHQISLTVCKGFE 351 (439)
Q Consensus 338 ~---~~~v~l~v~r~~~ 351 (439)
. +..|.|+|.|...
T Consensus 81 ~~~~~~~v~l~v~R~~~ 97 (108)
T 3cbz_A 81 IVHKPGPIVLTVAKSGG 97 (108)
T ss_dssp HHTSSSCEEEEEECCCC
T ss_pred cccCCCeEEEEEEeCCC
Confidence 6 5679999998754
No 50
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=99.43 E-value=2.5e-12 Score=100.18 Aligned_cols=83 Identities=30% Similarity=0.441 Sum_probs=72.4
Q ss_pred eeEEEEEecCC---CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHH
Q psy4596 159 FLQDVVLPKSG---PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLA 235 (439)
Q Consensus 159 ~~~~v~l~~~~---~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~ 235 (439)
+..+|.|.+.. +|||++.++.+ ..|++|..|.++|||+++| |++||+|++|||.++.++++.++...
T Consensus 6 ~~~~v~l~k~~~~~~~G~~~~~~~~---------~~gv~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~ 75 (91)
T 1m5z_A 6 ELHKVTLYKDSGMEDFGFSVADGLL---------EKGVYVKNIRPAGPGDLGG-LKPYDRLLQVNHVRTRDFDCCLVVPL 75 (91)
T ss_dssp EEEEEEEECCTTCSSSSEEEEECTT---------SSCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHH
T ss_pred ceEEEEEEECCCCCCccEEEEeccC---------CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHH
Confidence 67788888853 79999988643 2479999999999999999 99999999999999999999988888
Q ss_pred HhCCCCeEEEEEecCC
Q psy4596 236 LLEPCPEILLKIQHDP 251 (439)
Q Consensus 236 l~~~~~~v~l~v~r~~ 251 (439)
++..+..+.|+|.|++
T Consensus 76 ~~~~g~~v~l~v~R~p 91 (91)
T 1m5z_A 76 IAESGNKLDLVISRNP 91 (91)
T ss_dssp HHTSTTEEEEEEEECC
T ss_pred HHcCCCEEEEEEEeCc
Confidence 8877889999998863
No 51
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=99.43 E-value=4.1e-13 Score=111.69 Aligned_cols=87 Identities=25% Similarity=0.354 Sum_probs=72.6
Q ss_pred eeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcC-CCCHHHHHHHHhc
Q psy4596 259 ITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLL-GASHQEAVNTLRY 337 (439)
Q Consensus 259 v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~-~~~~~~~~~~l~~ 337 (439)
+.+.+....+|||.|.++..... ...++||..|.++|||+++|+|++||+|++|||+++. +++|.+++.+|+.
T Consensus 29 v~l~k~~~~~lG~~i~g~~~~~~------~~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~~l~~ 102 (128)
T 2db5_A 29 IDIERPSTGGLGFSVVALRSQNL------GKVDIFVKDVQPGSVADRDQRLKENDQILAINHTPLDQNISHQQAIALLQQ 102 (128)
T ss_dssp EEEECCSSSCCCCEEEEEECSSS------SCEEEEEECCCTTSHHHHTCCCCSSCBEEEESSCBCSTTSCHHHHHHHHHH
T ss_pred EEEEECCCCccCEEEecccCCCC------CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCCHHHHHHHHHc
Confidence 34444445789999987643211 1348999999999999999999999999999999997 9999999999999
Q ss_pred CCCeEEEEEecCCc
Q psy4596 338 SGHQISLTVCKGFE 351 (439)
Q Consensus 338 ~~~~v~l~v~r~~~ 351 (439)
.+..|.|+|.|...
T Consensus 103 ~~~~v~l~v~r~~~ 116 (128)
T 2db5_A 103 TTGSLRLIVAREPV 116 (128)
T ss_dssp CCSEEEEEEEECCC
T ss_pred CCCeEEEEEEcCCC
Confidence 89999999998743
No 52
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=99.42 E-value=2.5e-12 Score=100.11 Aligned_cols=82 Identities=30% Similarity=0.464 Sum_probs=69.9
Q ss_pred eeEEEEEecCC-CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHh
Q psy4596 159 FLQDVVLPKSG-PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALL 237 (439)
Q Consensus 159 ~~~~v~l~~~~-~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~ 237 (439)
.++.|+|.|.. +|||++.++.+ ..|++|..|.++|||+++| |++||+|++|||.++.++++.++...++
T Consensus 3 ~~r~v~l~r~~~g~G~~~~~~~~---------~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~ 72 (91)
T 1g9o_A 3 LPRLCCLEKGPNGYGFHLHGEKG---------KLGQYIRLVEPGSPAEKAG-LLAGDRLVEVNGENVEKETHQQVVSRIR 72 (91)
T ss_dssp CCEEEEEECBTTBCCEEEEECTT---------CSSEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred ccEEEEEEeCCCcccEEEEecCC---------CCCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 45789999877 99999988653 2479999999999999999 9999999999999999999999999998
Q ss_pred CCCCeEEEEEecC
Q psy4596 238 EPCPEILLKIQHD 250 (439)
Q Consensus 238 ~~~~~v~l~v~r~ 250 (439)
.....+.+.+.+.
T Consensus 73 ~~~~~~~~~~~~r 85 (91)
T 1g9o_A 73 AALNAVRLLVVDP 85 (91)
T ss_dssp TCSSEEEEEEECC
T ss_pred cCCCcEEEEEEcC
Confidence 7766665555443
No 53
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=99.42 E-value=1.1e-12 Score=100.77 Aligned_cols=82 Identities=34% Similarity=0.517 Sum_probs=71.2
Q ss_pred EEEEEecCCCccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHhCCC
Q psy4596 161 QDVVLPKSGPLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALLEPC 240 (439)
Q Consensus 161 ~~v~l~~~~~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~ 240 (439)
..|+|...++|||++.++.+. ..|++|..|.++|||+++| |++||+|++|||.++.++++.++...++..+
T Consensus 3 ~~v~l~~~~~~G~~l~gg~~~--------~~~v~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~ 73 (85)
T 1rgw_A 3 YSVTLTGPGPWGFRLQGGKDF--------NMPLTISRITPGSKAAQSQ-LSQGDLVVAIDGVNTDTMTHLEAQNKIKSAS 73 (85)
T ss_dssp EEEEECCSSCCCEEECCCGGG--------TSCCBEEEECTTSHHHHSS-CCCCSBEEEETTEECTTCCHHHHHHHHTTCS
T ss_pred EEEEEeCCCccCEEEEeccCC--------CCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHHcCC
Confidence 567776666999999987553 2378999999999999999 9999999999999999999999998888777
Q ss_pred CeEEEEEecCC
Q psy4596 241 PEILLKIQHDP 251 (439)
Q Consensus 241 ~~v~l~v~r~~ 251 (439)
..+.|+|.|++
T Consensus 74 ~~v~l~v~R~~ 84 (85)
T 1rgw_A 74 YNLSLTLQKSK 84 (85)
T ss_dssp SCEEEEEESCC
T ss_pred CeEEEEEEeCC
Confidence 78999998864
No 54
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=99.42 E-value=1e-12 Score=107.36 Aligned_cols=88 Identities=43% Similarity=0.631 Sum_probs=73.0
Q ss_pred ceeeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHh
Q psy4596 257 QEITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLR 336 (439)
Q Consensus 257 ~~v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~ 336 (439)
.++.+.+. ..+|||+|.++.... ..+...+++|.+|.++|||+++|+|++||+|++|||+++.++++.+++.+|+
T Consensus 26 ~~v~l~k~-~~glG~~i~gg~~~~----~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 100 (117)
T 2byg_A 26 VEIKLFKG-PKGLGFSIAGGVGNQ----HIPGDNSIYVTKIIDGGAAQKDGRLQVGDRLLMVNNYSLEEVTHEEAVAILK 100 (117)
T ss_dssp EEEEEECB-TTBSSEEEEECTTSC----SBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred EEEEEEeC-CCCcCEEEEcccCCC----CccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 34555444 478999998764211 1122458999999999999999999999999999999999999999999999
Q ss_pred cCCCeEEEEEecC
Q psy4596 337 YSGHQISLTVCKG 349 (439)
Q Consensus 337 ~~~~~v~l~v~r~ 349 (439)
..+..|.|+|.|.
T Consensus 101 ~~g~~v~l~v~R~ 113 (117)
T 2byg_A 101 NTSEVVYLKVGKP 113 (117)
T ss_dssp TCCSEEEEEEEEE
T ss_pred cCCCeEEEEEEeC
Confidence 9899999999885
No 55
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.42 E-value=1.3e-12 Score=105.13 Aligned_cols=93 Identities=33% Similarity=0.484 Sum_probs=79.0
Q ss_pred CCceeEEEEEecCC-CccEEEee---CCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHH
Q psy4596 156 SSLFLQDVVLPKSG-PLGFSIIG---GTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEE 231 (439)
Q Consensus 156 ~~~~~~~v~l~~~~-~lG~~i~~---~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~ 231 (439)
..++...|.|.+.. +|||++.+ +.+.. ....|++|..|.++|||+++|+|++||+|++|||.++.++++.+
T Consensus 6 ~~~~~~~v~l~k~~~glG~~i~~~~~g~~~~-----~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~ 80 (107)
T 1wf8_A 6 SGLELFPVELEKDEDGLGISIIGMGVGADAG-----LEKLGIFVKTVTEGGAAQRDGRIQVNDQIVEVDGISLVGVTQNF 80 (107)
T ss_dssp CCEEEEEEEEECBTTBSCEEEEEEEESCCTT-----CCEEEEEEEEECTTCHHHHHCSSCTTCBEEEETTEECBSCCHHH
T ss_pred CCceEEEEEEEECCCcccEEEEecCCCCCCC-----CCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH
Confidence 34577888998877 99999998 33321 12348999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCeEEEEEecCCCC
Q psy4596 232 AVLALLEPCPEILLKIQHDPHP 253 (439)
Q Consensus 232 ~~~~l~~~~~~v~l~v~r~~~~ 253 (439)
++..++..+..+.|+|.|+...
T Consensus 81 ~~~~~~~~~~~v~l~v~R~~~~ 102 (107)
T 1wf8_A 81 AATVLRNTKGNVRFVIGREKPS 102 (107)
T ss_dssp HHHHHHHCCSEEEEEEEEECCC
T ss_pred HHHHHhcCCCeEEEEEEeCCCC
Confidence 9988888889999999987654
No 56
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=99.42 E-value=1.1e-12 Score=99.41 Aligned_cols=75 Identities=23% Similarity=0.292 Sum_probs=67.2
Q ss_pred eeEEEEEecCC--CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHH
Q psy4596 159 FLQDVVLPKSG--PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLAL 236 (439)
Q Consensus 159 ~~~~v~l~~~~--~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l 236 (439)
..+.|+|+|.. +|||++.++ +|..|.++|||+++| |++||+|++|||+++.+++|.+++..|
T Consensus 4 ~~r~v~l~k~~~g~~Gf~i~~g---------------~I~~v~~gspA~~aG-l~~GD~Il~VNG~~v~~~~~~evv~ll 67 (82)
T 1r6j_A 4 DPRTITMHKDSTGHVGFIFKNG---------------KITSIVKDSSAARNG-LLTEHNICEINGQNVIGLKDSQIADIL 67 (82)
T ss_dssp CCEEEEEECCTTSCCCEEEETT---------------EEEEECTTSHHHHHT-CCSSEEEEEETTEECTTCCHHHHHHHH
T ss_pred ceEEEEEEECCCCCeEEEEECC---------------EEEEecCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHH
Confidence 45789999974 799999752 478999999999999 999999999999999999999999999
Q ss_pred hCCCCeEEEEEec
Q psy4596 237 LEPCPEILLKIQH 249 (439)
Q Consensus 237 ~~~~~~v~l~v~r 249 (439)
+..+..++|+|..
T Consensus 68 r~~g~~V~L~v~p 80 (82)
T 1r6j_A 68 STSGTVVTITIMP 80 (82)
T ss_dssp HHSCSEEEEEEEE
T ss_pred hcCCCEEEEEEEe
Confidence 9888999998864
No 57
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=99.42 E-value=3.1e-12 Score=101.03 Aligned_cols=88 Identities=35% Similarity=0.546 Sum_probs=76.4
Q ss_pred eeEEEEEecCC-CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHh
Q psy4596 159 FLQDVVLPKSG-PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALL 237 (439)
Q Consensus 159 ~~~~v~l~~~~-~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~ 237 (439)
..+.|.|.+.. +|||++.++.+.. ..|++|..|.++|||+++|+|++||+|++|||.++.++++.++...++
T Consensus 4 ~~~~v~l~~~~~~lG~~l~~~~~~~-------~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~ 76 (98)
T 2opg_A 4 CETTIEISKGRTGLGLSIVGGSDTL-------LGAIIIHEVYEEGAACKDGRLWAGDQILEVNGIDLRKATHDEAINVLR 76 (98)
T ss_dssp EEEEEEEECBTTBTCEEEEECTTST-------TCSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred CEEEEEEEECCCcccEEEecCCCCC-------CCCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 45678888876 8999999876532 247999999999999999999999999999999999999999998888
Q ss_pred CCCCeEEEEEecCCCC
Q psy4596 238 EPCPEILLKIQHDPHP 253 (439)
Q Consensus 238 ~~~~~v~l~v~r~~~~ 253 (439)
..+..+.|+|.|++..
T Consensus 77 ~~~~~v~l~v~R~~~~ 92 (98)
T 2opg_A 77 QTPQRVRLTLYRDEAP 92 (98)
T ss_dssp TCCSEEEEEEEECSSC
T ss_pred hCCCeEEEEEEcCCCC
Confidence 7778999999998754
No 58
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=99.42 E-value=1.8e-12 Score=100.29 Aligned_cols=84 Identities=29% Similarity=0.434 Sum_probs=72.6
Q ss_pred eeEEEEEecCCCccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHhC
Q psy4596 159 FLQDVVLPKSGPLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALLE 238 (439)
Q Consensus 159 ~~~~v~l~~~~~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~ 238 (439)
....|++....+|||++.++.+. ..+++|..|.++|||+++| |++||+|++|||.++.++++.++...++.
T Consensus 3 ~~~~v~l~~~~~~G~~l~~g~~~--------~~~~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~ 73 (88)
T 2uzc_A 3 SNYSVSLVGPAPWGFRLQGGKDF--------NMPLTISSLKDGGKAAQAN-VRIGDVVLSIDGINAQGMTHLEAQNKIKG 73 (88)
T ss_dssp CEEEEEEESSSCCCEEEEEEGGG--------TEEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHT
T ss_pred cEEEEEEcCCCcccEEEECcCCC--------CCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 45677885556999999987652 2379999999999999999 99999999999999999998999988887
Q ss_pred CCCeEEEEEecCC
Q psy4596 239 PCPEILLKIQHDP 251 (439)
Q Consensus 239 ~~~~v~l~v~r~~ 251 (439)
.+..+.|+|.|++
T Consensus 74 ~g~~v~l~v~R~g 86 (88)
T 2uzc_A 74 CTGSLNMTLQRES 86 (88)
T ss_dssp CCSEEEEEEECCC
T ss_pred CCCeEEEEEEeCC
Confidence 7889999999875
No 59
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=99.42 E-value=1.3e-12 Score=104.62 Aligned_cols=89 Identities=40% Similarity=0.640 Sum_probs=73.4
Q ss_pred eeeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhc
Q psy4596 258 EITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRY 337 (439)
Q Consensus 258 ~v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~ 337 (439)
++.+.+. ..+|||++.++.... ......+++|..|.++|||+++|+|++||+|++|||+++.++++.+++..++.
T Consensus 6 ~v~l~k~-~~glG~~i~gg~~~~----~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~ 80 (105)
T 2awx_A 6 EIKLIKG-PKGLGFSIAGGVGNQ----HIPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNSVSLEEVTHEEAVTALKN 80 (105)
T ss_dssp EEEEECB-TTBSSEEEEECBTSC----SBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHS
T ss_pred EEEEEEC-CCCCCEEEeCccCCC----CCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 4444444 368999999865211 11224589999999999999999999999999999999999999999999999
Q ss_pred CCCeEEEEEecCCc
Q psy4596 338 SGHQISLTVCKGFE 351 (439)
Q Consensus 338 ~~~~v~l~v~r~~~ 351 (439)
.+..+.|+|.|...
T Consensus 81 ~~~~v~l~v~R~~~ 94 (105)
T 2awx_A 81 TSDFVYLKVAKPTS 94 (105)
T ss_dssp CCSEEEEEEECCCC
T ss_pred CCCeEEEEEEcCCC
Confidence 89999999998754
No 60
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=99.42 E-value=1.9e-12 Score=105.85 Aligned_cols=88 Identities=30% Similarity=0.531 Sum_probs=76.3
Q ss_pred eeEEEEEecCC--CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHH
Q psy4596 159 FLQDVVLPKSG--PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLAL 236 (439)
Q Consensus 159 ~~~~v~l~~~~--~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l 236 (439)
..+.|.+.+.. +|||+|.++.+.. ....|++|..|.++|+|+++|+|++||+|++|||.++.++++.+++..+
T Consensus 24 ~~~~v~l~k~~~~~lGf~i~gg~~~~-----~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l 98 (118)
T 3b76_A 24 HEKVVNIQKDPGESLGMTVAGGASHR-----EWDLPIYVISVEPGGVISRDGRIKTGDILLNVDGVELTEVSRSEAVALL 98 (118)
T ss_dssp EEEEEEEECCTTCCCCEEEEECSCST-----TCCCCEEEEEECTTSHHHHHCSSCTTCEEEEETTEEGGGSCHHHHHHHH
T ss_pred CcEEEEEEeCCCCccCEEEecCCCCC-----CCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 56778888763 9999999986532 1245899999999999999999999999999999999999999999999
Q ss_pred hCCCCeEEEEEecCC
Q psy4596 237 LEPCPEILLKIQHDP 251 (439)
Q Consensus 237 ~~~~~~v~l~v~r~~ 251 (439)
+..+..+.|+|.|..
T Consensus 99 ~~~~~~v~L~v~R~~ 113 (118)
T 3b76_A 99 KRTSSSIVLKALEVK 113 (118)
T ss_dssp HSCCSEEEEEEEEEE
T ss_pred HcCCCeEEEEEEECC
Confidence 988899999998854
No 61
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.41 E-value=2.3e-12 Score=103.21 Aligned_cols=92 Identities=38% Similarity=0.656 Sum_probs=78.1
Q ss_pred eeEEEEEecCC-CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHh
Q psy4596 159 FLQDVVLPKSG-PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALL 237 (439)
Q Consensus 159 ~~~~v~l~~~~-~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~ 237 (439)
+..++.|.+.. +|||+|.++.+.. ++.....|++|..|.++|||+++|+|++||+|++|||.++.++++.+++..++
T Consensus 7 ~~~~v~l~~~~~glG~~l~~g~~~~--~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~ 84 (105)
T 1wha_A 7 GRHVACLARSERGLGFSIAGGKGST--PYRAGDAGIFVSRIAEGGAAHRAGTLQVGDRVLSINGVDVTEARHDHAVSLLT 84 (105)
T ss_dssp EEEEEEECCCTTCCSCEEECCTTSC--CSSTTCCSCEEEECCTTSSHHHHSSCCTTCEEEEESSCBCTTCCHHHHHHHHT
T ss_pred eeEEEEEEeCCCccCEEEEeccCCC--cccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 56778888876 8999999876531 11123458999999999999999999999999999999999999999999998
Q ss_pred CCCCeEEEEEecCCC
Q psy4596 238 EPCPEILLKIQHDPH 252 (439)
Q Consensus 238 ~~~~~v~l~v~r~~~ 252 (439)
..+..+.|+|.|++.
T Consensus 85 ~~g~~v~l~v~R~~~ 99 (105)
T 1wha_A 85 AASPTIALLLEREAG 99 (105)
T ss_dssp SCCSCEEEEEEECCC
T ss_pred cCCCeEEEEEEECCC
Confidence 888889999999764
No 62
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=99.41 E-value=6.7e-13 Score=104.37 Aligned_cols=82 Identities=26% Similarity=0.400 Sum_probs=71.7
Q ss_pred ceeeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHh
Q psy4596 257 QEITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLR 336 (439)
Q Consensus 257 ~~v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~ 336 (439)
+.+.+.+..+..||+++.... ..+++|.+|.++|||+++|+|++||+|++|||+++.+++++++.++|+
T Consensus 14 ~~v~l~K~~~~~lG~~l~~~~-----------~~gv~V~~V~~gspA~~aG~L~~GD~Il~ING~~v~~~~~~~~~~~l~ 82 (97)
T 2ejy_A 14 RLIQFEKVTEEPMGICLKLNE-----------KQSCTVARILHGGMIHRQGSLHVGDEILEINGTNVTNHSVDQLQKAMK 82 (97)
T ss_dssp EEEEEEECSSSCCSEEEEECT-----------TCCEEEEEECSSSHHHHHTCCCTTCEEEEETTBCCCSSCSHHHHHHHH
T ss_pred EEEEEEeCCCCCeeEEEEeCC-----------CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 356666777788999997532 248999999999999999999999999999999999989999999999
Q ss_pred cCCCeEEEEEecC
Q psy4596 337 YSGHQISLTVCKG 349 (439)
Q Consensus 337 ~~~~~v~l~v~r~ 349 (439)
..+..+.|+|.+.
T Consensus 83 ~~~~~v~L~V~~~ 95 (97)
T 2ejy_A 83 ETKGMISLKVIPN 95 (97)
T ss_dssp HCCEEEEEEEECC
T ss_pred cCCCeEEEEEEEC
Confidence 8888999999864
No 63
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.41 E-value=9.2e-13 Score=105.16 Aligned_cols=90 Identities=26% Similarity=0.382 Sum_probs=77.1
Q ss_pred CCceeEEEEEecCC-CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHH
Q psy4596 156 SSLFLQDVVLPKSG-PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVL 234 (439)
Q Consensus 156 ~~~~~~~v~l~~~~-~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~ 234 (439)
..+..+.+.|.+.. +|||++.++.+. ..+++|..|.++|||+++|+|++||+|++|||+++.++++.++..
T Consensus 6 ~~~~~~~v~l~~~~~g~G~~i~~g~~~--------~~~~~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~ 77 (103)
T 1uep_A 6 SGYKELDVHLRRMESGFGFRILGGDEP--------GQPILIGAVIAMGSADRDGRLHPGDELVYVDGIPVAGKTHRYVID 77 (103)
T ss_dssp SSEEEECCEEESSSSSCCEEECCCCST--------TSCCBEEEECTTSTTGGGTCCCTTCEEEEETTEECTTSCHHHHHH
T ss_pred CCceEEEEEEEeCCCccCEEEeeecCC--------CCCeEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 34567778888866 999999986542 247999999999999999999999999999999999889999998
Q ss_pred HHhCC--CCeEEEEEecCCCC
Q psy4596 235 ALLEP--CPEILLKIQHDPHP 253 (439)
Q Consensus 235 ~l~~~--~~~v~l~v~r~~~~ 253 (439)
.++.. +..+.|+|.|+...
T Consensus 78 ~l~~~~~g~~v~l~v~R~~~~ 98 (103)
T 1uep_A 78 LMHHAARNGQVNLTVRRKVLS 98 (103)
T ss_dssp HHHHHHHHTEEEEEEEEECCC
T ss_pred HHHhCCCCCcEEEEEEeCCCC
Confidence 88865 78999999987643
No 64
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=99.41 E-value=2.5e-12 Score=100.34 Aligned_cols=84 Identities=36% Similarity=0.536 Sum_probs=73.8
Q ss_pred eeEEEEEecC--CCccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHH
Q psy4596 159 FLQDVVLPKS--GPLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLAL 236 (439)
Q Consensus 159 ~~~~v~l~~~--~~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l 236 (439)
+..+|.|.+. .+|||++.++.+ ..|++|..|.++|||+++|+|++||+|++|||.++.++++.++...+
T Consensus 4 ~~~~v~l~k~~~~~lG~~~~~~~~---------~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~ 74 (92)
T 2qg1_A 4 DTLTIGLQKKPGKGLGLSIVGKRN---------DTGVFVSDIVKGGIADADGRLMQGDQILMVNGEDVRNATQEAVAALL 74 (92)
T ss_dssp CEEEEEEECCTTSCCSEEEECCSS---------SCSCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred eEEEEEEEeCCCCcccEEEEeccC---------CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 5678888885 399999987543 24799999999999999999999999999999999999999999888
Q ss_pred hCCCCeEEEEEecCC
Q psy4596 237 LEPCPEILLKIQHDP 251 (439)
Q Consensus 237 ~~~~~~v~l~v~r~~ 251 (439)
+..+..+.|+|.|..
T Consensus 75 ~~~~~~v~l~v~R~~ 89 (92)
T 2qg1_A 75 KCSLGTVTLEVGRIS 89 (92)
T ss_dssp HHCCSEEEEEEECCC
T ss_pred HcCCCeEEEEEEccc
Confidence 878888999999875
No 65
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=99.41 E-value=2.1e-12 Score=101.69 Aligned_cols=89 Identities=26% Similarity=0.372 Sum_probs=75.9
Q ss_pred eeEEEEEecCC-CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHh
Q psy4596 159 FLQDVVLPKSG-PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALL 237 (439)
Q Consensus 159 ~~~~v~l~~~~-~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~ 237 (439)
..+.|.|.+.. +|||++.+..... ...|++|..|.++|||+++| |++||+|++|||.++.++++.++...+.
T Consensus 3 ~~r~v~l~k~~~~~G~~l~~~~~~~------~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~ 75 (96)
T 2v90_A 3 KPRCLHLEKGPQGFGFLLREEKGLD------GRPGQFLWEVDPGLPAKKAG-MQAGDRLVAVAGESVEGLGHEETVSRIQ 75 (96)
T ss_dssp CCEEEEEECBTTBSCEEEEEEECTT------SCEEEEEEEECTTSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHH
T ss_pred CCEEEEEEeCCCcccEEEEeccCCC------CCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 35789999876 9999998743211 13379999999999999999 9999999999999999888999999988
Q ss_pred CCCCeEEEEEecCCCCC
Q psy4596 238 EPCPEILLKIQHDPHPE 254 (439)
Q Consensus 238 ~~~~~v~l~v~r~~~~~ 254 (439)
..+..+.|+|.|++...
T Consensus 76 ~~g~~v~l~v~r~~~~~ 92 (96)
T 2v90_A 76 GQGSCVSLTVVDPEADR 92 (96)
T ss_dssp TTTTEEEEEEECCCTTS
T ss_pred cCCCEEEEEEECCCCcc
Confidence 87889999999987653
No 66
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=99.40 E-value=4.3e-12 Score=100.03 Aligned_cols=87 Identities=32% Similarity=0.511 Sum_probs=75.3
Q ss_pred eeEEEEEecCC-CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHh
Q psy4596 159 FLQDVVLPKSG-PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALL 237 (439)
Q Consensus 159 ~~~~v~l~~~~-~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~ 237 (439)
..+.|.+.+.+ +|||++.+..+. ..+++|..|.++|||+++|+|++||+|++|||.++.++++.++...++
T Consensus 5 ~~~~v~l~~~~~~lG~~i~~~~~~--------~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~ 76 (97)
T 1n7e_A 5 IIYTVELKRYGGPLGITISGTEEP--------FDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQ 76 (97)
T ss_dssp CEEEEEEECTTSCCCEEEECCSST--------TSCCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred eEEEEEEEeCCCCcCEEEEcccCC--------CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 56778888776 699999876431 247999999999999999999999999999999999989999998888
Q ss_pred CCCCeEEEEEecCCCC
Q psy4596 238 EPCPEILLKIQHDPHP 253 (439)
Q Consensus 238 ~~~~~v~l~v~r~~~~ 253 (439)
..+..+.|+|.|++..
T Consensus 77 ~~g~~v~l~v~R~~~~ 92 (97)
T 1n7e_A 77 MAGETVTLKIKKQTDA 92 (97)
T ss_dssp TCCSEEEEEEECCCCC
T ss_pred cCCCeEEEEEEeCCCC
Confidence 7788999999997654
No 67
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=99.40 E-value=1.8e-12 Score=101.53 Aligned_cols=87 Identities=40% Similarity=0.665 Sum_probs=71.8
Q ss_pred eeeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhc
Q psy4596 258 EITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRY 337 (439)
Q Consensus 258 ~v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~ 337 (439)
++.+.+. ..+|||++.++... +..+...+++|..|.++|||+++|.|++||+|++|||+++.++++.+++.+++.
T Consensus 6 ~v~l~k~-~~g~G~~i~gg~~~----~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~ 80 (94)
T 2fe5_A 6 EVNLLKG-PKGLGFSIAGGIGN----QHIPGDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKN 80 (94)
T ss_dssp EEEEECC-TTCSCEEEEECBTS----CSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHT
T ss_pred EEEEEEC-CCCCCEEEEcccCC----CCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 4444444 56799999886421 112234589999999999999999999999999999999999999999999998
Q ss_pred CCCeEEEEEecC
Q psy4596 338 SGHQISLTVCKG 349 (439)
Q Consensus 338 ~~~~v~l~v~r~ 349 (439)
.+..+.|+|.|.
T Consensus 81 ~~~~v~l~v~R~ 92 (94)
T 2fe5_A 81 TSDMVYLKVAKP 92 (94)
T ss_dssp CCSEEEEEEECC
T ss_pred CCCeEEEEEEcC
Confidence 888999999875
No 68
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=99.40 E-value=1.8e-12 Score=100.91 Aligned_cols=82 Identities=28% Similarity=0.496 Sum_probs=69.3
Q ss_pred ceeeeeeccC-cccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHH
Q psy4596 257 QEITLIRQEG-EKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTL 335 (439)
Q Consensus 257 ~~v~l~~~~~-~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l 335 (439)
.++.+.+... ..|||.+.++.. ..|++|..|.++|||+++| |++||+|++|||+++.++++.+++.++
T Consensus 8 ~~v~l~k~~~~~~~G~~~~~~~~----------~~gv~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~~ 76 (91)
T 1m5z_A 8 HKVTLYKDSGMEDFGFSVADGLL----------EKGVYVKNIRPAGPGDLGG-LKPYDRLLQVNHVRTRDFDCCLVVPLI 76 (91)
T ss_dssp EEEEEECCTTCSSSSEEEEECTT----------SSCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred EEEEEEECCCCCCccEEEEeccC----------CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 3445544433 579999987531 3489999999999999999 999999999999999999999999999
Q ss_pred hcCCCeEEEEEecC
Q psy4596 336 RYSGHQISLTVCKG 349 (439)
Q Consensus 336 ~~~~~~v~l~v~r~ 349 (439)
+..+..+.|+|.|.
T Consensus 77 ~~~g~~v~l~v~R~ 90 (91)
T 1m5z_A 77 AESGNKLDLVISRN 90 (91)
T ss_dssp HTSTTEEEEEEEEC
T ss_pred HcCCCEEEEEEEeC
Confidence 98889999999874
No 69
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=99.40 E-value=2.7e-12 Score=100.00 Aligned_cols=85 Identities=34% Similarity=0.568 Sum_probs=74.4
Q ss_pred eEEEEEecCCCccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHhCC
Q psy4596 160 LQDVVLPKSGPLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALLEP 239 (439)
Q Consensus 160 ~~~v~l~~~~~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~ 239 (439)
.+.+.+...++|||++.++.+. ..|++|..|.++|||+++| |++||+|++|||.++.++.+.++...+...
T Consensus 4 ~~~v~~~~~~~~G~~l~~~~~~--------~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 74 (91)
T 2pkt_A 4 TQQIDLQGPGPWGFRLVGGKDF--------EQPLAISRVTPGSKAALAN-LCIGDVITAIDGENTSNMTHLEAQNRIKGC 74 (91)
T ss_dssp EEEEEEESSSCCSEEEEEEGGG--------TEEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTC
T ss_pred cEEEEECCCCCCCEEEEccCCC--------CCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 4667777777999999987542 2379999999999999999 999999999999999999999999888888
Q ss_pred CCeEEEEEecCCCC
Q psy4596 240 CPEILLKIQHDPHP 253 (439)
Q Consensus 240 ~~~v~l~v~r~~~~ 253 (439)
+..+.|+|.|++..
T Consensus 75 g~~v~l~v~R~g~~ 88 (91)
T 2pkt_A 75 TDNLTLTVARSEHE 88 (91)
T ss_dssp SSEEEEEEEEECCC
T ss_pred CCeEEEEEEECCcc
Confidence 89999999998754
No 70
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=99.40 E-value=1.6e-12 Score=108.62 Aligned_cols=94 Identities=24% Similarity=0.445 Sum_probs=76.1
Q ss_pred ceeeeeeccCcccceeecCCccCCCC---CCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHH
Q psy4596 257 QEITLIRQEGEKLGMHIKGGLRGQRG---NPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVN 333 (439)
Q Consensus 257 ~~v~l~~~~~~~lG~~i~~~~~~~~g---~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~ 333 (439)
+.+.+.+....+|||+|.++.....- .+......|++|..|.++|||+++| |++||+|++|||+++.++++.+++.
T Consensus 29 r~v~l~r~~~~g~Gf~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~gspA~~aG-L~~GD~Il~Vng~~v~~~~~~~~~~ 107 (132)
T 3l4f_D 29 KTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAG-LRMGDFLIEVNGQNVVKVGHRQVVN 107 (132)
T ss_dssp CEEEEECCTTSCCCEEEEEECCSSCCSCCCCCTTSCCSEEEEEECTTSGGGGGT-CCTTCEEEEESSSBCTTSCHHHHHH
T ss_pred EEEEEEECCCCcEeEEEeccCCCCccccccccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHH
Confidence 45666776778999999987532100 0111223489999999999999999 9999999999999999999999999
Q ss_pred HHhcCCCeEEEEEecCCc
Q psy4596 334 TLRYSGHQISLTVCKGFE 351 (439)
Q Consensus 334 ~l~~~~~~v~l~v~r~~~ 351 (439)
+|++.+..+.|+|.+...
T Consensus 108 ~l~~~g~~v~l~v~~~~~ 125 (132)
T 3l4f_D 108 MIRQGGNTLMVKVVMVTR 125 (132)
T ss_dssp HHHHTTTEEEEEEECCCC
T ss_pred HHHcCCCEEEEEEEECCC
Confidence 999999999999988643
No 71
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=99.40 E-value=1.7e-12 Score=101.60 Aligned_cols=83 Identities=31% Similarity=0.486 Sum_probs=70.8
Q ss_pred ceeeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHh
Q psy4596 257 QEITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLR 336 (439)
Q Consensus 257 ~~v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~ 336 (439)
+.+.+.+. ..+|||++.++. ...+++|..|.++|||+++|+|++||+|++|||+++.+++|.+++.+|+
T Consensus 6 r~v~l~k~-~~~lG~~i~~~~----------~~~~~~V~~v~~gspA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~ 74 (93)
T 3o46_A 6 KIIRLVKN-REPLGATIKKDE----------QTGAIIVARIMRGGAADRSGLIHVGDELREVNGIPVEDKRPEEIIQILA 74 (93)
T ss_dssp EEEEEEES-SSCCCEEEEECT----------TTCCEEEEEECTTSHHHHHTCCCTTCEEEEETTEESTTSCHHHHHHHHH
T ss_pred EEEEEEeC-CCCccEEEEecC----------CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 34555554 468999997641 2348999999999999999999999999999999999999999999999
Q ss_pred cCCCeEEEEEecCC
Q psy4596 337 YSGHQISLTVCKGF 350 (439)
Q Consensus 337 ~~~~~v~l~v~r~~ 350 (439)
..+..+.|+|.+..
T Consensus 75 ~~~~~v~l~v~~~~ 88 (93)
T 3o46_A 75 QSQGAITFKIIPGS 88 (93)
T ss_dssp HCCEEEEEEEECC-
T ss_pred hCCCeEEEEEEeCC
Confidence 98889999998764
No 72
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=99.40 E-value=2.7e-12 Score=100.81 Aligned_cols=81 Identities=32% Similarity=0.689 Sum_probs=69.6
Q ss_pred CcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCeEEEE
Q psy4596 266 GEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRYSGHQISLT 345 (439)
Q Consensus 266 ~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l~ 345 (439)
...|||+|.++... .+.+......+++|..|.++|||++ | |++||+|++|||+++.++++.+++..++..+..+.|+
T Consensus 12 ~~~lG~~i~gg~~~-~~~p~~~~~~gv~V~~V~~~spA~~-g-L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~ 88 (95)
T 1mfg_A 12 DPELGFSISGGVGG-RGNPFRPDDDGIFVTRVQPEGPASK-L-LQPGDKIIQANGYSFINIEHGQAVSLLKTFQNTVELI 88 (95)
T ss_dssp SSSCSEEEEECBTS-CCCSSSTTCCCEEEEEECTTSTTTT-T-CCTTCEEEEETTEECTTCBHHHHHHHHHHCCSEEEEE
T ss_pred CCCCCEEEeCCcCc-cCCccccCCCCEEEEEECCCCchhh-C-CCCCCEEEEECCEEcCCCCHHHHHHHhhcCCCeEEEE
Confidence 34799999986532 2344444567999999999999999 8 9999999999999999999999999999889999999
Q ss_pred EecC
Q psy4596 346 VCKG 349 (439)
Q Consensus 346 v~r~ 349 (439)
|.|.
T Consensus 89 v~R~ 92 (95)
T 1mfg_A 89 IVRE 92 (95)
T ss_dssp EEEE
T ss_pred EEeC
Confidence 9885
No 73
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=99.40 E-value=2.8e-12 Score=102.10 Aligned_cols=88 Identities=40% Similarity=0.579 Sum_probs=73.1
Q ss_pred eeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcC
Q psy4596 259 ITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRYS 338 (439)
Q Consensus 259 v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~ 338 (439)
+.+.+ ...+|||++.++... +......+++|..|.++|||+++|.|++||+|++|||.++.++++.+++.+++..
T Consensus 8 v~l~k-~~~glG~~i~~g~~~----~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 82 (102)
T 2i1n_A 8 IVLER-GNSGLGFSIAGGIDN----PHVPDDPGIFITKIIPGGAAAMDGRLGVNDCVLRVNEVDVSEVVHSRAVEALKEA 82 (102)
T ss_dssp EEEEC-BTTBTSEEEEECTTS----CSSTTCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHHS
T ss_pred EEEEE-CCCcCCEEEEcccCC----CCcCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 44443 467899999886532 1112345899999999999999999999999999999999999999999999998
Q ss_pred CCeEEEEEecCCc
Q psy4596 339 GHQISLTVCKGFE 351 (439)
Q Consensus 339 ~~~v~l~v~r~~~ 351 (439)
+..+.|+|.|...
T Consensus 83 g~~v~l~v~R~~~ 95 (102)
T 2i1n_A 83 GPVVRLVVRRRQP 95 (102)
T ss_dssp CSEEEEEEEEECC
T ss_pred CCeEEEEEEeCCC
Confidence 9999999998643
No 74
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=99.40 E-value=1.6e-12 Score=101.05 Aligned_cols=85 Identities=32% Similarity=0.569 Sum_probs=72.8
Q ss_pred eeEEEEEecCC-CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHh
Q psy4596 159 FLQDVVLPKSG-PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALL 237 (439)
Q Consensus 159 ~~~~v~l~~~~-~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~ 237 (439)
..++|.|.+.. +|||++.++.+. ..+++|..|.++|||+++|+|++||+|++|||.++.++++.++...++
T Consensus 2 ~~~~v~l~~~~~g~G~~~~~g~~~--------~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~ 73 (90)
T 2q9v_A 2 MEQDIFLWRKETGFGFRILGGNEP--------GEPIYIGHIVPLGAADTDGRLRSGDELISVDGTPVIGKSHQLVVQLMQ 73 (90)
T ss_dssp EEEEEEEECBTTBCCEEEEECSST--------TSCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHH
T ss_pred CcEEEEEEECCCccCEEEEccccC--------CCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 45778888876 999999987542 236999999999999999999999999999999999889999998887
Q ss_pred CCC--CeEEEEEecCC
Q psy4596 238 EPC--PEILLKIQHDP 251 (439)
Q Consensus 238 ~~~--~~v~l~v~r~~ 251 (439)
... ..+.|+|.|..
T Consensus 74 ~~~~~~~v~l~v~R~~ 89 (90)
T 2q9v_A 74 QAAKQGHVNLTVRQTR 89 (90)
T ss_dssp HHHHHTEEEEEEEECC
T ss_pred hCCCCCeEEEEEEecc
Confidence 653 48999998863
No 75
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.40 E-value=1.5e-12 Score=103.67 Aligned_cols=86 Identities=27% Similarity=0.405 Sum_probs=74.8
Q ss_pred eeEEEEEecCC-CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHh
Q psy4596 159 FLQDVVLPKSG-PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALL 237 (439)
Q Consensus 159 ~~~~v~l~~~~-~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~ 237 (439)
..+.|+|.+.. +|||++....+ ..|++|..|.++|||+++| |++||+|++|||.++.++++.++...++
T Consensus 6 ~~r~v~l~k~~~g~G~~l~~~~~---------~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~ 75 (102)
T 2d90_A 6 SGRVVVIKKGSNGYGFYLRAGPE---------QKGQIIKDIEPGSPAEAAG-LKNNDLVVAVNGKSVEALDHDGVVEMIR 75 (102)
T ss_dssp SSEEEEEECCSSSSSCEEEECSS---------SSSEEEECCCTTSTTTTTT-CCTTCEEEEESSCBCTTSCHHHHHHHHH
T ss_pred CCEEEEEeeCCCCccEEEEeecC---------CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 45789999877 89999987432 2379999999999999999 9999999999999999988999998888
Q ss_pred CCCCeEEEEEecCCCCC
Q psy4596 238 EPCPEILLKIQHDPHPE 254 (439)
Q Consensus 238 ~~~~~v~l~v~r~~~~~ 254 (439)
..+..+.|+|.|++...
T Consensus 76 ~~g~~v~l~v~r~~~~~ 92 (102)
T 2d90_A 76 KGGDQTTLLVLDKEAES 92 (102)
T ss_dssp HSTTEEEEEECSTTCCC
T ss_pred cCCCEEEEEEEECCCce
Confidence 77889999998876553
No 76
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=99.39 E-value=1e-12 Score=102.18 Aligned_cols=83 Identities=37% Similarity=0.537 Sum_probs=71.9
Q ss_pred ceeeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhc-CCCCCCCEEEEECCEEcCCCCHHHHHHHH
Q psy4596 257 QEITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRD-GRLKVGMRLLEVNGMSLLGASHQEAVNTL 335 (439)
Q Consensus 257 ~~v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~-G~L~~GD~Il~VNg~~v~~~~~~~~~~~l 335 (439)
.++.+.+.....|||++.++.. ...+++|..|.++|||+++ | |++||+|++|||+++.++++.+++.++
T Consensus 6 ~~v~l~k~~~~~lG~~i~~~~~---------~~~g~~V~~V~~~spA~~agg-l~~GD~I~~ing~~v~~~~~~~~~~~~ 75 (90)
T 1qav_A 6 RRVTVRKADAGGLGISIKGGRE---------NKMPILISKIFKGLAADQTEA-LFVGDAILSVNGEDLSSATHDEAVQAL 75 (90)
T ss_dssp EEEEEECCTTTCCCEEEEEEGG---------GTEEEEEEEECTTSHHHHTTC-CCTTEEEEEETTEECTTCCHHHHHHHH
T ss_pred EEEEEEeCCCCCcCEEEEcccC---------CCCCEEEEEECCCCHHHhcCC-CCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 4566666667889999987542 1347999999999999999 6 999999999999999999999999999
Q ss_pred hcCCCeEEEEEecC
Q psy4596 336 RYSGHQISLTVCKG 349 (439)
Q Consensus 336 ~~~~~~v~l~v~r~ 349 (439)
+..+..+.|+|.|.
T Consensus 76 ~~~~~~v~l~v~r~ 89 (90)
T 1qav_A 76 KKTGKEVVLEVKYM 89 (90)
T ss_dssp HTCCSEEEEEEEEC
T ss_pred HhCCCeEEEEEEEe
Confidence 99899999999873
No 77
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=99.39 E-value=4e-12 Score=100.04 Aligned_cols=86 Identities=38% Similarity=0.693 Sum_probs=71.7
Q ss_pred eeeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhc
Q psy4596 258 EITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRY 337 (439)
Q Consensus 258 ~v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~ 337 (439)
++.+.+ ....|||++.++..... ...+++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+++.
T Consensus 8 ~v~l~k-~~~~lG~~i~~g~~~~~------~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~ 80 (96)
T 1d5g_A 8 EVELAK-NDNSLGISVTGGVNTSV------RHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRN 80 (96)
T ss_dssp EEEEEC-SSSSCCEEEECCSSSCS------SSSCCEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHS
T ss_pred EEEEEe-CCCCCCEEEECCCCCCC------CcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 344433 35789999998643211 23589999999999999999999999999999999999999999999999
Q ss_pred CCCeEEEEEecCC
Q psy4596 338 SGHQISLTVCKGF 350 (439)
Q Consensus 338 ~~~~v~l~v~r~~ 350 (439)
.+..+.|+|.|..
T Consensus 81 ~g~~v~l~v~R~~ 93 (96)
T 1d5g_A 81 TGQVVHLLLEKGQ 93 (96)
T ss_dssp CCSEEEEEEECCS
T ss_pred CCCeEEEEEEcCC
Confidence 8899999998864
No 78
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=99.39 E-value=2.6e-12 Score=102.65 Aligned_cols=84 Identities=43% Similarity=0.714 Sum_probs=74.8
Q ss_pred eeEEEEEecCC-CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHh
Q psy4596 159 FLQDVVLPKSG-PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALL 237 (439)
Q Consensus 159 ~~~~v~l~~~~-~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~ 237 (439)
..+.|+|.+.+ +|||++.++.+ ..|++|..|.++|||+++|+|++||+|++|||.++.++++.++...++
T Consensus 11 ~~~~v~l~k~~~glG~~~~~~~~---------~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~ 81 (104)
T 3i4w_A 11 EPRRIVIHRGSTGLGFNIVGGEX---------GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALK 81 (104)
T ss_dssp SCEEEEEECBTTBTSEEEEECC----------CCCEEEEEECTTSHHHHHCCCCTTEEEEEETTEECTTCCHHHHHHHHH
T ss_pred ccEEEEEEeCCCccCEEEECCCC---------CCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 56788999877 99999998654 237999999999999999999999999999999999999999998888
Q ss_pred CCCCeEEEEEecCC
Q psy4596 238 EPCPEILLKIQHDP 251 (439)
Q Consensus 238 ~~~~~v~l~v~r~~ 251 (439)
..+..+.|+|.|++
T Consensus 82 ~~~~~v~l~v~r~~ 95 (104)
T 3i4w_A 82 NAGQTVTIIAQYKP 95 (104)
T ss_dssp TSCSEEEEEEEECH
T ss_pred cCCCeEEEEEEECc
Confidence 88899999999874
No 79
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=99.39 E-value=1.2e-12 Score=107.02 Aligned_cols=89 Identities=33% Similarity=0.521 Sum_probs=76.6
Q ss_pred eeEEEEEecCC-CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHh
Q psy4596 159 FLQDVVLPKSG-PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALL 237 (439)
Q Consensus 159 ~~~~v~l~~~~-~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~ 237 (439)
..++|.|.|.. +|||++.++.+... ...|++|..|.++|||+++|+|++||+|++|||.++.++++.+++..++
T Consensus 25 ~~~~v~L~k~~~glGf~l~~g~~~~~-----~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 99 (117)
T 2fne_A 25 QCKSITLERGPDGLGFSIVGGYGSPH-----GDLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILK 99 (117)
T ss_dssp EEEEEEECCBTTBTSEEEEEEEEETT-----EEEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred ccEEEEEEeCCCcccEEEecccCCCC-----CCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 56789999876 99999998754211 1247999999999999999999999999999999999999999999998
Q ss_pred CCCCeEEEEEecCCC
Q psy4596 238 EPCPEILLKIQHDPH 252 (439)
Q Consensus 238 ~~~~~v~l~v~r~~~ 252 (439)
..+..+.|+|.|++.
T Consensus 100 ~~~~~v~l~v~R~g~ 114 (117)
T 2fne_A 100 RTKGTVTLMVLSSDE 114 (117)
T ss_dssp HCCSSEEEEEEECSC
T ss_pred cCCCeEEEEEEeCCc
Confidence 777789999998764
No 80
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.39 E-value=3.1e-12 Score=104.53 Aligned_cols=92 Identities=26% Similarity=0.392 Sum_probs=76.9
Q ss_pred eeEEEEEecC--------CCccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHH
Q psy4596 159 FLQDVVLPKS--------GPLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHE 230 (439)
Q Consensus 159 ~~~~v~l~~~--------~~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~ 230 (439)
..+.+.|.+. .+|||+|.++.+... .....|++|..|.++|+|+++|+|++||+|++|||.++.+++|.
T Consensus 12 ~~~~v~l~r~~~~~~~~~~glG~~i~g~~~~~~---~~~~~g~~V~~v~~~s~A~~aG~L~~GD~Il~vng~~v~~~~~~ 88 (117)
T 1ujd_A 12 PHARIKITRDSKDHTVSGNGLGIRIVGGKEIPG---HSGEIGAYIAKILPGGSAEQTGKLMEGMQVLEWNGIPLTSKTYE 88 (117)
T ss_dssp CEEEEEECCCSSSSCSSCCSCSEEEEEEEECSS---SSSCEEEEEEEECTTCHHHHHSSCCTTCEEEEETTEECTTCCHH
T ss_pred ceEEEEEEecCcccCCCCCcccEEEeCCCCCCc---ccCCcCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHH
Confidence 4566777764 389999998765321 11234899999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCCeEEEEEecCCCC
Q psy4596 231 EAVLALLEPCPEILLKIQHDPHP 253 (439)
Q Consensus 231 ~~~~~l~~~~~~v~l~v~r~~~~ 253 (439)
+++..++..+..+.|+|.|++..
T Consensus 89 ~~~~~l~~~~~~v~l~v~R~~~~ 111 (117)
T 1ujd_A 89 EVQSIISQQSGEAEICVRLDLNM 111 (117)
T ss_dssp HHHHHHSCCSSCEEEEEESSCCC
T ss_pred HHHHHHhcCCCEEEEEEEECCcc
Confidence 99999988888999999998753
No 81
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.39 E-value=3.3e-12 Score=102.86 Aligned_cols=90 Identities=33% Similarity=0.341 Sum_probs=75.9
Q ss_pred eeEEEEEecCC-CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHh
Q psy4596 159 FLQDVVLPKSG-PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALL 237 (439)
Q Consensus 159 ~~~~v~l~~~~-~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~ 237 (439)
..+.|.|.|.+ +|||+|.++.+.. .....|++|..|.++|||+++|+|++||+|++|||.++.+++|.+++..++
T Consensus 15 ~~~~v~l~k~~~glG~~i~~~~~~~----~~~~~g~~V~~v~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 90 (108)
T 2d92_A 15 EVKIVELVKDCKGLGFSILDYQDPL----DPTRSVIVIRSLVADGVAERSGGLLPGDRLVSVNEYCLDNTSLAEAVEILK 90 (108)
T ss_dssp SCEEEEEEECSSCCSEEEEEEECSS----CTTCEEEEEEEECTTCHHHHHTCCCTTCEEEEESSCBCTTCCHHHHHHHHH
T ss_pred ceEEEEEEECCCccCEEEecccccC----CCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 45788998877 9999999865421 112358999999999999999999999999999999999999999999998
Q ss_pred CC-CCeEEEEEecCCC
Q psy4596 238 EP-CPEILLKIQHDPH 252 (439)
Q Consensus 238 ~~-~~~v~l~v~r~~~ 252 (439)
.. +..+.|+|.|...
T Consensus 91 ~~~~~~v~l~v~R~~~ 106 (108)
T 2d92_A 91 AVPPGLVHLGICSGPS 106 (108)
T ss_dssp HSCSEEEEEEEECCCC
T ss_pred hCCCCeEEEEEEcCCC
Confidence 74 5789999998753
No 82
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=99.39 E-value=2.3e-12 Score=103.29 Aligned_cols=81 Identities=21% Similarity=0.376 Sum_probs=70.4
Q ss_pred eeeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhc
Q psy4596 258 EITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRY 337 (439)
Q Consensus 258 ~v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~ 337 (439)
++.+.+....+|||.+.+. ..|++|.+|.++|||+++|+|++||+|++|||+++.++++.++..+++.
T Consensus 5 ~v~L~k~~~~glG~~i~~~------------~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~ 72 (106)
T 2la8_A 5 NVDLMKKAGKELGLSLSPN------------EIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFKG 72 (106)
T ss_dssp EEEECCBSSSTTCCEEEEC------------SSSEEEEECCTTSCHHHHTTCCTTCEEEEESSCBCSSSCHHHHHHHHHS
T ss_pred EEEEEeCCCCccCEEEEeC------------CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhC
Confidence 3455556677899988652 2489999999999999999999999999999999999999999999999
Q ss_pred CCCeEEEEEecCC
Q psy4596 338 SGHQISLTVCKGF 350 (439)
Q Consensus 338 ~~~~v~l~v~r~~ 350 (439)
.++.+.|+|.|..
T Consensus 73 ~~~~v~l~v~R~~ 85 (106)
T 2la8_A 73 ANGKVSMEVTRPK 85 (106)
T ss_dssp CBSCEEEEEEECC
T ss_pred CCCeEEEEEEeCC
Confidence 8889999999864
No 83
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.39 E-value=1.5e-12 Score=104.94 Aligned_cols=86 Identities=29% Similarity=0.504 Sum_probs=71.0
Q ss_pred cceeeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHH
Q psy4596 256 FQEITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTL 335 (439)
Q Consensus 256 ~~~v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l 335 (439)
+..+.+.+ ..+|||++.++.... ...++||..|.++|+|+++|+|++||+|++|||+++.+++|++++++|
T Consensus 16 ~~~v~l~k--~~glG~~i~gg~~~~-------~~~~~~V~~v~~~s~A~~aG~l~~GD~Il~Vng~~~~~~~~~~~~~~l 86 (109)
T 1wi4_A 16 FRVITVTK--ETGLGLKILGGINRN-------EGPLVYIHEVIPGGDCYKDGRLKPGDQLVSINKESMIGVSFEEAKSII 86 (109)
T ss_dssp EEEEEECC--SSCCCEEEEECSSSS-------SCSSEEEEEECTTSHHHHHCSCCTTCBEEEETTSCCTTCCHHHHHHHH
T ss_pred EEEEEEeC--CCccCEEEEeccCCC-------CCCCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 34444444 378999999875321 123799999999999999999999999999999999999999999999
Q ss_pred hcC----CCeEEEEEecCC
Q psy4596 336 RYS----GHQISLTVCKGF 350 (439)
Q Consensus 336 ~~~----~~~v~l~v~r~~ 350 (439)
+.+ +..++|.+.|..
T Consensus 87 ~~~~~r~~~~~~l~v~R~~ 105 (109)
T 1wi4_A 87 TRAKLRSESPWEIAFIRSG 105 (109)
T ss_dssp HHSCCSSSSCEEEEEECCC
T ss_pred HccccCCCceEEEEEEeCC
Confidence 985 478899998864
No 84
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=99.39 E-value=2.6e-12 Score=102.08 Aligned_cols=89 Identities=40% Similarity=0.642 Sum_probs=73.2
Q ss_pred ceeeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHh
Q psy4596 257 QEITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLR 336 (439)
Q Consensus 257 ~~v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~ 336 (439)
.++.+.+. ..+|||++.++.... +.....+++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+++
T Consensus 9 ~~v~l~~~-~~~lG~~l~~g~~~~----~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~ 83 (101)
T 2jik_A 9 EEINLTRG-PSGLGFNIVGGTDQQ----YVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFR 83 (101)
T ss_dssp EEEEEECC-TTCCCEEEEECTTSC----SBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHH
T ss_pred EEEEEEeC-CCCCCEEEeccccCC----CccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 34555554 478999999865321 1112458999999999999999999999999999999999999999999999
Q ss_pred cCCCeEEEEEecCC
Q psy4596 337 YSGHQISLTVCKGF 350 (439)
Q Consensus 337 ~~~~~v~l~v~r~~ 350 (439)
..+..+.|+|.|..
T Consensus 84 ~~g~~v~l~v~R~~ 97 (101)
T 2jik_A 84 NAGYAVSLRVQHRL 97 (101)
T ss_dssp TCCSEEEEEEEEES
T ss_pred hCCCeEEEEEEeCC
Confidence 88899999998854
No 85
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.39 E-value=3.7e-12 Score=103.09 Aligned_cols=85 Identities=34% Similarity=0.647 Sum_probs=75.2
Q ss_pred eeEEEEEecCC-CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHh
Q psy4596 159 FLQDVVLPKSG-PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALL 237 (439)
Q Consensus 159 ~~~~v~l~~~~-~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~ 237 (439)
..+.|.|.+.+ +|||.+.++.+ .|++|..|.++|+|+++|+|++||+|++|||.++.++++.++...++
T Consensus 15 ~~~~v~l~~~~~~lG~~l~~~~~----------~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~ 84 (111)
T 2dlu_A 15 HVEEVELINDGSGLGFGIVGGKT----------SGVVVRTIVPGGLADRDGRLQTGDHILKIGGTNVQGMTSEQVAQVLR 84 (111)
T ss_dssp EEEEEEEECCSSCCCEEEECCSS----------SSBEEEEECTTSSHHHHTCCCSSCEEEEESSCCCTTSCHHHHHHHHH
T ss_pred ceEEEEEEeCCCccCEEEeccCC----------CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 56788998877 89999987543 37999999999999999999999999999999999999999998888
Q ss_pred CCCCeEEEEEecCCCC
Q psy4596 238 EPCPEILLKIQHDPHP 253 (439)
Q Consensus 238 ~~~~~v~l~v~r~~~~ 253 (439)
..+..+.|+|.|++..
T Consensus 85 ~~g~~v~l~v~R~~~~ 100 (111)
T 2dlu_A 85 NCGNSVRMLVARDPAG 100 (111)
T ss_dssp HHCSEEEEEEEESCTT
T ss_pred hCCCeEEEEEEeCCCC
Confidence 7788899999987654
No 86
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=99.39 E-value=1.9e-12 Score=103.30 Aligned_cols=91 Identities=32% Similarity=0.431 Sum_probs=77.2
Q ss_pred eeEEEEEecCCCccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHhC
Q psy4596 159 FLQDVVLPKSGPLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALLE 238 (439)
Q Consensus 159 ~~~~v~l~~~~~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~ 238 (439)
....|.+.+..+|||++.++.+....++.....|++|..|.++|||++ | |++||+|++|||.++.++++.+++..++.
T Consensus 11 ~~~~v~l~~~~~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~-g-L~~GD~I~~vng~~v~~~~~~~~~~~~~~ 88 (103)
T 1n7t_A 11 QEIRVRVEKDPELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-L-LQPGDKIIQANGYSFINIEHGQAVSLLKT 88 (103)
T ss_dssp CCEEEEEECSSCCCBEEEECTTSSBCSSCSSCCSEECCCBSSSSTTSS-S-CCTTCEEEEETTEECSSCCHHHHHHHHHH
T ss_pred EEEEEEEccCCCccEEEEcccCCCCCccccCCCCEEEEEECCCCchHH-C-CCCCCEEEEECCEECCCCCHHHHHHHhhc
Confidence 456788888889999999976533333333456899999999999999 9 99999999999999999999999988888
Q ss_pred CCCeEEEEEecCC
Q psy4596 239 PCPEILLKIQHDP 251 (439)
Q Consensus 239 ~~~~v~l~v~r~~ 251 (439)
.+..+.|+|.|+.
T Consensus 89 ~g~~v~l~v~R~~ 101 (103)
T 1n7t_A 89 FQNTVELIIVREV 101 (103)
T ss_dssp CCSEEEEEEECCC
T ss_pred CCCeEEEEEEecC
Confidence 8899999999874
No 87
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=99.39 E-value=1.2e-12 Score=100.99 Aligned_cols=82 Identities=34% Similarity=0.594 Sum_probs=70.2
Q ss_pred ceeeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhh-cCCCCCCCEEEEECCEEcCCCCHHHHHHHH
Q psy4596 257 QEITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKR-DGRLKVGMRLLEVNGMSLLGASHQEAVNTL 335 (439)
Q Consensus 257 ~~v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~-~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l 335 (439)
..+.+.+.....|||++.++.. ...+++|..|.++|||++ +| |++||+|++|||+++.+++|.+++.++
T Consensus 4 ~~v~l~~~~~~~lG~~i~~~~~---------~~~~~~V~~V~~gspA~~~ag-l~~GD~I~~vng~~v~~~~~~~~~~~~ 73 (87)
T 4e34_A 4 RKVLLLKEDHEGLGISITGGKE---------HGVPILISEIHPGQPADRCGG-LHVGDAILAVNGVNLRDTKHKEAVTIL 73 (87)
T ss_dssp EEEEEECCTTBCCCEEEEEEGG---------GTEEEEEEEECTTSHHHHHSC-CCTTEEEEEETTEECTTCCHHHHHHHH
T ss_pred EEEEEEECCCCcccEEEEccCC---------CCCCEEEEEECCCCHHHhcCC-CCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 4566666667789999987642 124799999999999999 58 999999999999999999999999999
Q ss_pred hcCCCeEEEEEec
Q psy4596 336 RYSGHQISLTVCK 348 (439)
Q Consensus 336 ~~~~~~v~l~v~r 348 (439)
++.+..+.|+|.+
T Consensus 74 ~~~~~~v~l~v~~ 86 (87)
T 4e34_A 74 SQQRGEIEFEVVY 86 (87)
T ss_dssp HHCCSEEEEEEEE
T ss_pred HcCCCeEEEEEEE
Confidence 9988999998864
No 88
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=99.39 E-value=2.9e-12 Score=102.37 Aligned_cols=87 Identities=34% Similarity=0.567 Sum_probs=73.4
Q ss_pred CCCCcceeeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHH
Q psy4596 252 HPEGFQEITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEA 331 (439)
Q Consensus 252 ~~~~~~~v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~ 331 (439)
.+.....+.+.+. ..+|||.+.++.. ..+++|..|.++|||+++|+|++||+|++|||.++.++++.++
T Consensus 8 ~~~~~~~v~l~k~-~~glG~~~~~~~~----------~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~ 76 (104)
T 3i4w_A 8 IPREPRRIVIHRG-STGLGFNIVGGEX----------GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQA 76 (104)
T ss_dssp CCSSCEEEEEECB-TTBTSEEEEECC-----------CCCEEEEEECTTSHHHHHCCCCTTEEEEEETTEECTTCCHHHH
T ss_pred CCCccEEEEEEeC-CCccCEEEECCCC----------CCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHH
Confidence 3334445555554 5679999987641 2489999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCeEEEEEecC
Q psy4596 332 VNTLRYSGHQISLTVCKG 349 (439)
Q Consensus 332 ~~~l~~~~~~v~l~v~r~ 349 (439)
+..++..+..+.|+|.|.
T Consensus 77 ~~~~~~~~~~v~l~v~r~ 94 (104)
T 3i4w_A 77 AIALKNAGQTVTIIAQYK 94 (104)
T ss_dssp HHHHHTSCSEEEEEEEEC
T ss_pred HHHHHcCCCeEEEEEEEC
Confidence 999999999999999886
No 89
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.39 E-value=1.5e-12 Score=104.94 Aligned_cols=88 Identities=30% Similarity=0.403 Sum_probs=72.6
Q ss_pred ceeeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHh
Q psy4596 257 QEITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLR 336 (439)
Q Consensus 257 ~~v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~ 336 (439)
..+.+.+. ..+|||+|.++... ..+...+++|..|.++|||+++|+|++||+|++|||+++.+++|.+++.+|+
T Consensus 17 ~~v~l~k~-~~glG~~i~~~~~~-----~~~~~~g~~V~~v~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 90 (108)
T 2d92_A 17 KIVELVKD-CKGLGFSILDYQDP-----LDPTRSVIVIRSLVADGVAERSGGLLPGDRLVSVNEYCLDNTSLAEAVEILK 90 (108)
T ss_dssp EEEEEEEC-SSCCSEEEEEEECS-----SCTTCEEEEEEEECTTCHHHHHTCCCTTCEEEEESSCBCTTCCHHHHHHHHH
T ss_pred EEEEEEEC-CCccCEEEeccccc-----CCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 34555554 46899999886431 1122458999999999999999999999999999999999999999999999
Q ss_pred cC-CCeEEEEEecCC
Q psy4596 337 YS-GHQISLTVCKGF 350 (439)
Q Consensus 337 ~~-~~~v~l~v~r~~ 350 (439)
.. +..+.|+|.|..
T Consensus 91 ~~~~~~v~l~v~R~~ 105 (108)
T 2d92_A 91 AVPPGLVHLGICSGP 105 (108)
T ss_dssp HSCSEEEEEEEECCC
T ss_pred hCCCCeEEEEEEcCC
Confidence 95 578999999864
No 90
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=99.39 E-value=2.4e-12 Score=101.12 Aligned_cols=83 Identities=31% Similarity=0.544 Sum_probs=70.9
Q ss_pred eeeeeec-cCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHh
Q psy4596 258 EITLIRQ-EGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLR 336 (439)
Q Consensus 258 ~v~l~~~-~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~ 336 (439)
++.+.+. ....|||++.++.. ..|++|..|.++|||+++|+|++||+|++|||+++.++++.+++..++
T Consensus 6 ~v~l~k~~~~~~lG~~~~~~~~----------~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~ 75 (95)
T 2vwr_A 6 QVALHKRDSGEQLGIKLVRRTD----------EPGVFILDLLEGGLAAQDGRLSSNDRVLAINGHDLKYGTPELAAQIIQ 75 (95)
T ss_dssp EEEEECSSTTCCCCEEEEECSS----------SCSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred EEEEEECCCCCcccEEEEeccC----------CCCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 3444443 35679999976531 348999999999999999999999999999999999999999999999
Q ss_pred cCCCeEEEEEecCC
Q psy4596 337 YSGHQISLTVCKGF 350 (439)
Q Consensus 337 ~~~~~v~l~v~r~~ 350 (439)
..+..+.|+|.|..
T Consensus 76 ~~g~~v~l~v~R~~ 89 (95)
T 2vwr_A 76 ASGERVNLTIARPG 89 (95)
T ss_dssp HCCSEEEEEEEEES
T ss_pred cCCCEEEEEEEcCC
Confidence 98999999999853
No 91
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.38 E-value=5.4e-12 Score=101.92 Aligned_cols=89 Identities=28% Similarity=0.479 Sum_probs=77.4
Q ss_pred eeEEEEEecCC-CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHh
Q psy4596 159 FLQDVVLPKSG-PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALL 237 (439)
Q Consensus 159 ~~~~v~l~~~~-~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~ 237 (439)
+..+|.|.+.. +|||++.++.+... ...|++|..|.++|||+++|+|++||+|++|||.++.++++.+++..++
T Consensus 8 ~~~~v~l~~~~~glG~~l~~g~~~~~-----~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~ 82 (110)
T 1um1_A 8 YVFTVELERGPSGLGMGLIDGMHTHL-----GAPGLYIQTLLPGSPAAADGRLSLGDRILEVNGSSLLGLGYLRAVDLIR 82 (110)
T ss_dssp CEEEEEEECCTTCCCEEEEETTTSTT-----CCSSEEEEEECTTSHHHHHSCCCTTCEEEEESSCBCSSCCHHHHHHHHH
T ss_pred cEEEEEEEECCCccCEEEeCCcCCCC-----CCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 56778888876 99999998765321 2358999999999999999999999999999999999999999999998
Q ss_pred CCCCeEEEEEecCCC
Q psy4596 238 EPCPEILLKIQHDPH 252 (439)
Q Consensus 238 ~~~~~v~l~v~r~~~ 252 (439)
..+..+.|+|.|++.
T Consensus 83 ~~~~~v~l~v~R~~~ 97 (110)
T 1um1_A 83 HGGKKMRFLVAKSDV 97 (110)
T ss_dssp TCCSEEEEEEECCCH
T ss_pred cCCCeEEEEEEeCCc
Confidence 888999999999764
No 92
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=99.38 E-value=8.2e-13 Score=102.92 Aligned_cols=85 Identities=27% Similarity=0.316 Sum_probs=71.0
Q ss_pred eeEEEEEecCC-CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHh
Q psy4596 159 FLQDVVLPKSG-PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALL 237 (439)
Q Consensus 159 ~~~~v~l~~~~-~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~ 237 (439)
.++.|+|.|.. +|||++..... ..|++|..|.++|||+++| |++||+|++|||.++.++++.++...+.
T Consensus 3 ~pr~v~l~k~~~~~G~~l~~~~~---------~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~ 72 (91)
T 2vsp_A 3 KPKLCRLAKGENGYGFHLNAIRG---------LPGSFIKEVQKGGPADLAG-LEDEDVIIEVNGVNVLDEPYEKVVDRIQ 72 (91)
T ss_dssp CEEEEEEECBTTBTSCCCBCCTT---------CSCCBC-CCCTTSHHHHTT-CCTTCEEEEETTEECTTSCHHHHHHHHT
T ss_pred CcEEEEEEeCCCcccEEEEeccC---------CCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 45789999876 89999976533 2378999999999999999 9999999999999999999999999998
Q ss_pred CCCCeEEEEEecCCCC
Q psy4596 238 EPCPEILLKIQHDPHP 253 (439)
Q Consensus 238 ~~~~~v~l~v~r~~~~ 253 (439)
..+..+.|+|.|.+..
T Consensus 73 ~~g~~v~l~v~r~~~~ 88 (91)
T 2vsp_A 73 SSGKNVTLLVCGKKAQ 88 (91)
T ss_dssp TSCSEEEEEEEC----
T ss_pred cCCCEEEEEEEeCCcc
Confidence 7788999999987654
No 93
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=99.38 E-value=3.8e-12 Score=98.20 Aligned_cols=82 Identities=28% Similarity=0.445 Sum_probs=70.0
Q ss_pred EEEEEecCCCccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHhCCC
Q psy4596 161 QDVVLPKSGPLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALLEPC 240 (439)
Q Consensus 161 ~~v~l~~~~~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~ 240 (439)
.++++...++|||++.++.+. ..|++|..|.++|||+++| |++||+|++|||.++.++++.++...++...
T Consensus 4 ~~v~~~~~~~lG~~l~~~~~~--------~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~ 74 (87)
T 2pa1_A 4 LTVDVAGPAPWGFRITGGRDF--------HTPIMVTKVAERGKAKDAD-LRPGDIIVAINGESAEGMLHAEAQSKIRQSP 74 (87)
T ss_dssp EEEEECSSSCCSEEEEEEGGG--------TEEEEEEEECSSSHHHHTT-CCTTCEEEEETTEESTTCCHHHHHHHHHTCC
T ss_pred EEEEECCCCccCEEEecccCC--------CCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 345554445999999987652 2379999999999999999 9999999999999999888999999998766
Q ss_pred CeEEEEEecCC
Q psy4596 241 PEILLKIQHDP 251 (439)
Q Consensus 241 ~~v~l~v~r~~ 251 (439)
..+.|+|.|++
T Consensus 75 ~~v~l~v~R~~ 85 (87)
T 2pa1_A 75 SPLRLQLDRIT 85 (87)
T ss_dssp SSEEEEEEECC
T ss_pred CeEEEEEEecC
Confidence 88999999875
No 94
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=99.38 E-value=4.2e-12 Score=98.89 Aligned_cols=81 Identities=22% Similarity=0.306 Sum_probs=71.0
Q ss_pred eeEEEEEecCC-CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHh
Q psy4596 159 FLQDVVLPKSG-PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALL 237 (439)
Q Consensus 159 ~~~~v~l~~~~-~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~ 237 (439)
..+.|.|.+.. +|||.+.+. .+++|..|.++|||+++| |++||+|++|||.++.++++.++...++
T Consensus 3 ~~r~v~l~~~~~g~G~~l~~~------------~~~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~l~ 69 (91)
T 2f5y_A 3 RYRQITIPRGKDGFGFTICCD------------SPVRVQAVDSGGPAERAG-LQQLDTVLQLNERPVEHWKCVELAHEIR 69 (91)
T ss_dssp EEEEEEEECBTTBTSEEEECS------------SSCEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred ceEEEEEEeCCCCccEEEecC------------CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 56788998876 899998752 258999999999999999 9999999999999999999999998888
Q ss_pred CCCCeEEEEEecCCC
Q psy4596 238 EPCPEILLKIQHDPH 252 (439)
Q Consensus 238 ~~~~~v~l~v~r~~~ 252 (439)
..+..+.|+|.|...
T Consensus 70 ~~~~~v~l~v~R~~~ 84 (91)
T 2f5y_A 70 SCPSEIILLVWRMVP 84 (91)
T ss_dssp TCSSEEEEEEEECC-
T ss_pred cCCCeEEEEEEeCCC
Confidence 877889999998754
No 95
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=99.38 E-value=4.1e-12 Score=101.93 Aligned_cols=90 Identities=27% Similarity=0.492 Sum_probs=75.5
Q ss_pred eeEEEEEecCCCccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHhC
Q psy4596 159 FLQDVVLPKSGPLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALLE 238 (439)
Q Consensus 159 ~~~~v~l~~~~~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~ 238 (439)
...+|.+....+|||++.++.+... ...|++|..|.++|||+++|+|++||+|++|||.++.++++.+++..++.
T Consensus 11 ~~~~v~l~~~~glG~~i~~~~~~~~-----~~~gv~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~~~~ 85 (106)
T 3axa_A 11 EIITVTLKKQNGMGLSIVAAKGAGQ-----DKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTR 85 (106)
T ss_dssp CEEEEEEECSSSCSEEEEEEECSSC-----SSEEEEEEEEBTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHT
T ss_pred eEEEEEECCCCccCEEEEeecCCCC-----CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 5667777333499999987643211 23489999999999999999999999999999999999999999999988
Q ss_pred CCCeEEEEEecCCCC
Q psy4596 239 PCPEILLKIQHDPHP 253 (439)
Q Consensus 239 ~~~~v~l~v~r~~~~ 253 (439)
.+..+.|+|.|++..
T Consensus 86 ~g~~v~l~v~R~~~~ 100 (106)
T 3axa_A 86 TSSVVTLEVAKQGAI 100 (106)
T ss_dssp CCSEEEEEEECCCSS
T ss_pred CCCeEEEEEEeCCcc
Confidence 889999999998654
No 96
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=99.38 E-value=6.9e-12 Score=98.82 Aligned_cols=92 Identities=32% Similarity=0.521 Sum_probs=75.7
Q ss_pred eeEEEEEecCC-CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHh
Q psy4596 159 FLQDVVLPKSG-PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALL 237 (439)
Q Consensus 159 ~~~~v~l~~~~-~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~ 237 (439)
+...+.+.+.. +|||++.++.+.. ++.....|++|..|.++|||+++| |++||+|++|||.++.++++.+++..++
T Consensus 3 ~~~~v~~~~~~~glG~~i~~g~~~~--~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~ 79 (97)
T 2w4f_A 3 EELTLTILRQTGGLGISIAGGKGST--PYKGDDEGIFISRVSEEGPAARAG-VRVGDKLLEVNGVALQGAEHHEAVEALR 79 (97)
T ss_dssp CEEEEEEECBTTBSSEEEEECTTSC--CSBTTBCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred eEEEEEEEeCCCceeEEEECCccCC--cccCCCCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHh
Confidence 45667777765 9999999876532 111123589999999999999999 9999999999999999999988887787
Q ss_pred CCCCeEEEEEecCCCC
Q psy4596 238 EPCPEILLKIQHDPHP 253 (439)
Q Consensus 238 ~~~~~v~l~v~r~~~~ 253 (439)
..+..+.|+|.|++..
T Consensus 80 ~~g~~v~l~v~R~g~~ 95 (97)
T 2w4f_A 80 GAGTAVQMRVWRERET 95 (97)
T ss_dssp TSCSEEEEEEECCSSC
T ss_pred CCCCeEEEEEEeCCcc
Confidence 7889999999998753
No 97
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=99.38 E-value=2.8e-12 Score=99.63 Aligned_cols=81 Identities=26% Similarity=0.425 Sum_probs=69.7
Q ss_pred eeeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhc
Q psy4596 258 EITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRY 337 (439)
Q Consensus 258 ~v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~ 337 (439)
.+.+.+. ..+|||.+.++.. ..|++|..|.++|||+++| |++||+|++|||+++.+++|.++.++|+.
T Consensus 7 ~v~l~k~-~~g~G~~~~~~~~----------~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~ 74 (90)
T 2he4_A 7 LCHLRKG-PQGYGFNLHSDKS----------RPGQYIRSVDPGSPAARSG-LRAQDRLIEVNGQNVEGLRHAEVVASIKA 74 (90)
T ss_dssp EEEEECB-TTBCCEEEEECSS----------SSSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTSCHHHHHHHHTT
T ss_pred EEEEEEC-CCCccEEEEccCC----------CCCEEEEEECCCChHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 4444444 4679999987541 3489999999999999999 99999999999999999999999999999
Q ss_pred CCCeEEEEEecCC
Q psy4596 338 SGHQISLTVCKGF 350 (439)
Q Consensus 338 ~~~~v~l~v~r~~ 350 (439)
.+..+.|+|.|..
T Consensus 75 ~~~~v~l~v~r~~ 87 (90)
T 2he4_A 75 REDEARLLVVGPS 87 (90)
T ss_dssp SSSEEEEEEECCC
T ss_pred CCCcEEEEEEccC
Confidence 8899999998863
No 98
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=99.38 E-value=8.2e-13 Score=110.22 Aligned_cols=85 Identities=34% Similarity=0.487 Sum_probs=71.7
Q ss_pred eeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCC
Q psy4596 260 TLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRYSG 339 (439)
Q Consensus 260 ~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~ 339 (439)
.+.+.....|||++.++.....+ ..++||..|.++|||+++|+|++||+|++|||+++.+++|.+++++|+.+.
T Consensus 41 ~i~k~~~~~lG~~i~gg~~~~~~------~~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~ 114 (131)
T 1wfg_A 41 SVPRDSGAMLGLKVVGGKMTESG------RLCAFITKVKKGSLADTVGHLRPGDEVLEWNGRLLQGATFEEVYNIILESK 114 (131)
T ss_dssp CCCSCSCTTTTEEEEEEEECSSS------CEEEEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTCCHHHHHHHHHHTS
T ss_pred EEecCCCCCCCEEEecCccCCCC------CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcC
Confidence 33444677899999886543221 348999999999999999999999999999999999999999999999854
Q ss_pred --CeEEEEEecCC
Q psy4596 340 --HQISLTVCKGF 350 (439)
Q Consensus 340 --~~v~l~v~r~~ 350 (439)
..|.|+|.|..
T Consensus 115 ~g~~v~l~v~R~g 127 (131)
T 1wfg_A 115 PEPQVELVVSRSG 127 (131)
T ss_dssp SSSEEEEEEEEEC
T ss_pred CCCEEEEEEEcCC
Confidence 89999999853
No 99
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=99.38 E-value=3.2e-12 Score=130.03 Aligned_cols=174 Identities=10% Similarity=0.036 Sum_probs=115.9
Q ss_pred CCccEEEeeCC-CCCCCCCCCCC-CcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCH----------HHHHHHH
Q psy4596 169 GPLGFSIIGGT-DHSCIPFGQHK-PGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTH----------EEAVLAL 236 (439)
Q Consensus 169 ~~lG~~i~~~~-~~~~~~~g~~~-~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~----------~~~~~~l 236 (439)
+.||+.+.... +..+..++++. .|++|..|.++|||++ + |++||+|++|||++|.+... .......
T Consensus 253 ~~LGv~~~~~~~~~~~~~~~l~~~~Gv~V~~V~~~spA~~-a-l~~GDvI~~idg~~V~~~g~~~~~~~~~~~l~~~v~~ 330 (539)
T 4fln_A 253 PCLGVLLQKLENPALRECLKVPTNEGVLVRRVEPTSDASK-V-LKEGDVIVSFDDLHVGCEGTVPFRSSERIAFRYLISQ 330 (539)
T ss_dssp CBCCEEEEECCCHHHHHHHTCSSSBCEEEEEECTTSGGGG-T-CCTTCEEEEETTEECBSSSEEECSTTCEEETHHHHHT
T ss_pred eecceEEEecCCHHHHHhcCCCCcCceeeecccCCChHHh-C-ccCCCEEEEECCEEeCcCCeeccccchhHHHHHHHHc
Confidence 36888887642 22223334433 4999999999999976 5 99999999999999974321 1112233
Q ss_pred hCCCCeEEEEEecCCCCCCcceeeeeeccC--------------cccceeecCCccCC------------------CCCC
Q psy4596 237 LEPCPEILLKIQHDPHPEGFQEITLIRQEG--------------EKLGMHIKGGLRGQ------------------RGNP 284 (439)
Q Consensus 237 ~~~~~~v~l~v~r~~~~~~~~~v~l~~~~~--------------~~lG~~i~~~~~~~------------------~g~~ 284 (439)
+..++.+.|+|.|++..... ++++..... ...|+.+..-.... .+..
T Consensus 331 ~~~Gd~v~l~v~R~Gk~~~v-~Vtl~~~~~~~~~~~~~~~p~~~~~~Gl~f~~Lt~~~~~~~~~~~~~~~l~~~~~~~~~ 409 (539)
T 4fln_A 331 KFAGDIAEIGIIRAGEHKKV-QVVLRPRVHLVPYHIDGGQPSYIIVAGLVFTPLSEPLIEEECEDTIGLKLLTKARYSVA 409 (539)
T ss_dssp SCTTCEEEEEEEETTEEEEE-EEECBCCCCSSCSCTTSSCCCCCCSTTEEEEECCHHHHTTSCSSSSCHHHHHHHHHCCC
T ss_pred CCCCCEEEEEEEECCEEEEE-EEEEccCccccccccccCCCccccccceEEeeCCHHHHHhhcccccCceeeehhhhhhh
Confidence 46799999999999865322 122211110 11354443211100 0111
Q ss_pred CCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCC-CeEEEEEec
Q psy4596 285 LDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRYSG-HQISLTVCK 348 (439)
Q Consensus 285 ~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~-~~v~l~v~r 348 (439)
......+++|+.|.++++|...| ++.||+|++|||++|.++ .++.++|+++. +.+.|.+..
T Consensus 410 ~~~~~~gVvvs~V~~~s~a~~~g-~~~gdiI~~vNg~~V~s~--~~l~~~l~~~k~~~l~~~~~~ 471 (539)
T 4fln_A 410 RFRGEQIVILSQVLANEVNIGYE-DMNNQQVLKFNGIPIRNI--HHLAHLIDMCKDKYLVFEFED 471 (539)
T ss_dssp SSTTCCCEEEEEECCCGGGTTCS-SCCSEEEEEETTEECCSH--HHHHHHHHTCCSSEEEEEETT
T ss_pred ccCCceEEEEEEecCCchhhhcC-CCCCCEEEeECCEEcCCH--HHHHHHHHHcCCCeEEEEECC
Confidence 12234589999999999999999 999999999999999655 99999999865 556666543
No 100
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=99.38 E-value=2.1e-12 Score=104.88 Aligned_cols=91 Identities=31% Similarity=0.456 Sum_probs=77.8
Q ss_pred ceeEEEEEecCC-CccEEEee---CCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHH
Q psy4596 158 LFLQDVVLPKSG-PLGFSIIG---GTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAV 233 (439)
Q Consensus 158 ~~~~~v~l~~~~-~lG~~i~~---~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~ 233 (439)
++...|.|.+.. +|||++.+ +.+.. ....|++|..|.++|||+++|+|++||+|++|||.++.++++.+++
T Consensus 3 ~~~~~v~l~k~~~glG~~l~~~~~~~~~~-----~~~~g~~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~ 77 (113)
T 2g5m_B 3 MELFPVELEKDSEGLGISIIGMGAGADMG-----LEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAA 77 (113)
T ss_dssp CEEEEEECCCCSSCCCCEEEEEECCCCSS-----SCCEEEEEEECCTTSHHHHHTCSCTTCBEEEETTEECSSCCHHHHH
T ss_pred eEEEEEEEEeCCCCCCEEEEecCCCCcCC-----CCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHH
Confidence 466788888876 99999998 33321 1234899999999999999999999999999999999999999999
Q ss_pred HHHhCCCCeEEEEEecCCCC
Q psy4596 234 LALLEPCPEILLKIQHDPHP 253 (439)
Q Consensus 234 ~~l~~~~~~v~l~v~r~~~~ 253 (439)
..++..+..+.|+|.|++..
T Consensus 78 ~~~~~~g~~v~l~v~R~~~~ 97 (113)
T 2g5m_B 78 SVLRNTKGRVRFMIGRERPG 97 (113)
T ss_dssp HHHHHSCSSCEEEEEECCCC
T ss_pred HHHhcCCCeEEEEEEeCCCC
Confidence 88888889999999998765
No 101
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.38 E-value=9.6e-12 Score=102.58 Aligned_cols=87 Identities=28% Similarity=0.359 Sum_probs=75.7
Q ss_pred ceeEEEEEecCC-CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHH
Q psy4596 158 LFLQDVVLPKSG-PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLAL 236 (439)
Q Consensus 158 ~~~~~v~l~~~~-~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l 236 (439)
....+|.|.+.. +|||++.++.+. ..|++|..|.++|+|+++|+|++||+|++|||+++.++++.++..+|
T Consensus 18 ~~~~~v~l~~~~~glG~~~~~g~~~--------~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l 89 (123)
T 1ueq_A 18 GTFLSTTLKKSNMGFGFTIIGGDEP--------DEFLQVKSVIPDGPAAQDGKMETGDVIVYINEVCVLGHTHADVVKLF 89 (123)
T ss_dssp SEEEEEEEECCTTSCSEEEECCSSS--------SCCCEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTSCHHHHHHHH
T ss_pred CcEEEEEEEeCCCceeEEEecccCC--------CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 356778888876 999999986542 34799999999999999999999999999999999999999999999
Q ss_pred hC--CCCeEEEEEecCCC
Q psy4596 237 LE--PCPEILLKIQHDPH 252 (439)
Q Consensus 237 ~~--~~~~v~l~v~r~~~ 252 (439)
+. .+..+.|+|.|+..
T Consensus 90 ~~~~~g~~v~l~v~R~~~ 107 (123)
T 1ueq_A 90 QSVPIGQSVNLVLCRGYP 107 (123)
T ss_dssp HTSCTTCEEEEEEEESCC
T ss_pred HhCCCCCeEEEEEEeCCC
Confidence 87 47899999998763
No 102
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.38 E-value=2.7e-12 Score=103.35 Aligned_cols=90 Identities=33% Similarity=0.587 Sum_probs=77.7
Q ss_pred eeEEEEEecCC-CccEEEe-----eCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHH
Q psy4596 159 FLQDVVLPKSG-PLGFSII-----GGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEA 232 (439)
Q Consensus 159 ~~~~v~l~~~~-~lG~~i~-----~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~ 232 (439)
..++|.|.+.+ +|||++. ++.+.. ....|++|..|.++|||+++|+|++||+|++|||.++.++++.++
T Consensus 9 ~~~~v~l~k~~~~lG~~i~~~~~~gg~~~~-----~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~ 83 (108)
T 1q7x_A 9 DIFEVELAKNDNSLGISVTVLFDKGGVNTS-----VRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQA 83 (108)
T ss_dssp SEEEEEEESSSCSCCEEESSSSSSBCBCTT-----SSSCCCBEEEECTTSTHHHHTCCCSSCEEEEETTEECBSCTTSHH
T ss_pred cEEEEEEEECCCCccEEEEEeccCCCcccc-----CCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHH
Confidence 56788998876 9999999 554422 123589999999999999999999999999999999999999999
Q ss_pred HHHHhCCCCeEEEEEecCCCC
Q psy4596 233 VLALLEPCPEILLKIQHDPHP 253 (439)
Q Consensus 233 ~~~l~~~~~~v~l~v~r~~~~ 253 (439)
+..++..+..+.|+|.|++.+
T Consensus 84 ~~~~~~~g~~v~l~v~R~~~~ 104 (108)
T 1q7x_A 84 VETLRNTGQVVHLLLEKGQSP 104 (108)
T ss_dssp HHHHHHTTSEEEEEEECCCCS
T ss_pred HHHHHcCCCeEEEEEEeCCcc
Confidence 998888889999999998765
No 103
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=99.38 E-value=1.4e-12 Score=101.11 Aligned_cols=77 Identities=26% Similarity=0.478 Sum_probs=67.3
Q ss_pred ccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCeEE
Q psy4596 264 QEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRYSGHQIS 343 (439)
Q Consensus 264 ~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~ 343 (439)
.....|||++.++.. ...+++|..|.++|||+++| |++||+|++|||+++.++++.+++.+++..+..+.
T Consensus 10 ~~~~~~G~~l~gg~~---------~~~~v~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~ 79 (89)
T 2q3g_A 10 EGPAPWGFRLQGGKD---------FNVPLSISRLTPGGKAAQAG-VAVGDWVLSIDGENAGSLTHIEAQNKIRACGERLS 79 (89)
T ss_dssp ESSSCCCEEEEEEGG---------GTEEEEEEEECTTSHHHHTT-CCTTCEEEEETTEEGGGCCHHHHHHHHHTCTTEEE
T ss_pred cCCCcccEEEECcCC---------CCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCEEE
Confidence 345779999987542 13479999999999999999 99999999999999999999999999998889999
Q ss_pred EEEecCC
Q psy4596 344 LTVCKGF 350 (439)
Q Consensus 344 l~v~r~~ 350 (439)
|+|.|..
T Consensus 80 l~v~R~~ 86 (89)
T 2q3g_A 80 LGLSRAI 86 (89)
T ss_dssp EEEEEEC
T ss_pred EEEEeCC
Confidence 9998753
No 104
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.38 E-value=2.5e-12 Score=102.54 Aligned_cols=81 Identities=33% Similarity=0.507 Sum_probs=68.8
Q ss_pred eeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhc----
Q psy4596 262 IRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRY---- 337 (439)
Q Consensus 262 ~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~---- 337 (439)
+++...+|||+|.++.... ...++|..|.+++||+++|+|++||+|++|||+++.+++|++++++|+.
T Consensus 12 l~k~~~glG~~i~gg~~~~--------~~~~~I~~v~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~ 83 (103)
T 1ufx_A 12 VKKSAATLGIAIEGGANTR--------QPLPRIVTIQRGGSAHNCGQLKVGHVILEVNGLTLRGKEHREAARIIAEAFKT 83 (103)
T ss_dssp EECCSSSCCEEEECBTTSS--------CSSCEEEEECTTSHHHHHCSSCTTCBCCEETTEECTTCBHHHHHHHHHHHHHC
T ss_pred EEcCCCcCCeEEECCCCCC--------CCcEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhccc
Confidence 3455678999999875321 1235999999999999999999999999999999999999999999998
Q ss_pred -CCCeEEEEEecCC
Q psy4596 338 -SGHQISLTVCKGF 350 (439)
Q Consensus 338 -~~~~v~l~v~r~~ 350 (439)
.++++.|+|+|..
T Consensus 84 ~~~~~i~l~v~r~~ 97 (103)
T 1ufx_A 84 KDRDYIDFLVTEFN 97 (103)
T ss_dssp SSCSEEEEEECCCC
T ss_pred CCCCeEEEEEEEcc
Confidence 4688999998854
No 105
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.38 E-value=1.5e-12 Score=106.42 Aligned_cols=81 Identities=30% Similarity=0.507 Sum_probs=69.5
Q ss_pred CcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCeEEEE
Q psy4596 266 GEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRYSGHQISLT 345 (439)
Q Consensus 266 ~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l~ 345 (439)
...|||+|.++..... .....++||..|.++|||+++|+|++||+|++|||+++.+++|.+++.+|+..+..+.|+
T Consensus 29 ~~glG~~i~g~~~~~~----~~~~~g~~V~~v~~~s~A~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~~~~~v~l~ 104 (117)
T 1ujd_A 29 GNGLGIRIVGGKEIPG----HSGEIGAYIAKILPGGSAEQTGKLMEGMQVLEWNGIPLTSKTYEEVQSIISQQSGEAEIC 104 (117)
T ss_dssp CCSCSEEEEEEEECSS----SSSCEEEEEEEECTTCHHHHHSSCCTTCEEEEETTEECTTCCHHHHHHHHSCCSSCEEEE
T ss_pred CCcccEEEeCCCCCCc----ccCCcCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCEEEEE
Confidence 4689999988653211 112348999999999999999999999999999999999999999999999989999999
Q ss_pred EecCC
Q psy4596 346 VCKGF 350 (439)
Q Consensus 346 v~r~~ 350 (439)
|.|..
T Consensus 105 v~R~~ 109 (117)
T 1ujd_A 105 VRLDL 109 (117)
T ss_dssp EESSC
T ss_pred EEECC
Confidence 99864
No 106
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=99.38 E-value=3.9e-12 Score=99.49 Aligned_cols=85 Identities=29% Similarity=0.405 Sum_probs=73.0
Q ss_pred eeEEEEEecCC-CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHh
Q psy4596 159 FLQDVVLPKSG-PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALL 237 (439)
Q Consensus 159 ~~~~v~l~~~~-~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~ 237 (439)
..+.|.|.|.+ +|||++.+.. ...+++|..|.++|||+++|+|++||+|++|||.++.+++|.++...++
T Consensus 4 ~~r~v~l~k~~~~lG~~i~~~~---------~~~~~~V~~v~~gspA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~ 74 (93)
T 3o46_A 4 SVKIIRLVKNREPLGATIKKDE---------QTGAIIVARIMRGGAADRSGLIHVGDELREVNGIPVEDKRPEEIIQILA 74 (93)
T ss_dssp CCEEEEEEESSSCCCEEEEECT---------TTCCEEEEEECTTSHHHHHTCCCTTCEEEEETTEESTTSCHHHHHHHHH
T ss_pred cEEEEEEEeCCCCccEEEEecC---------CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 45778888877 9999998752 1347999999999999999999999999999999999889999999998
Q ss_pred CCCCeEEEEEecCCC
Q psy4596 238 EPCPEILLKIQHDPH 252 (439)
Q Consensus 238 ~~~~~v~l~v~r~~~ 252 (439)
..+..+.|+|.+...
T Consensus 75 ~~~~~v~l~v~~~~~ 89 (93)
T 3o46_A 75 QSQGAITFKIIPGSK 89 (93)
T ss_dssp HCCEEEEEEEECC--
T ss_pred hCCCeEEEEEEeCCC
Confidence 777789999987643
No 107
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=99.38 E-value=1.6e-12 Score=106.77 Aligned_cols=89 Identities=34% Similarity=0.469 Sum_probs=74.8
Q ss_pred eeEEEEEecCC--CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhc-CCCCCCCEEEEECCeeCCCCCHHHHHHH
Q psy4596 159 FLQDVVLPKSG--PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALS-GKLRMGDRILAVNGRDVSKVTHEEAVLA 235 (439)
Q Consensus 159 ~~~~v~l~~~~--~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~-G~L~~GD~Il~VNg~~v~~~~~~~~~~~ 235 (439)
..+.|.|.|.. +|||+|.++.+... ...|++|..|.++|||+++ | |++||+|++|||.++.++++.+++..
T Consensus 24 ~~~~v~l~k~~~~~lGf~i~gg~~~~~-----~~~~~~V~~V~~~spA~~agg-L~~GD~Il~VnG~~v~~~~~~~~~~~ 97 (120)
T 2iwo_A 24 GLRTVEMKKGPTDSLGISIAGGVGSPL-----GDVPIFIAMMHPTGVAAQTQK-LRVGDRIVTICGTSTEGMTHTQAVNL 97 (120)
T ss_dssp -CEEEEEEC----CCCEEEEEEEEETT-----EEEEEEEEEECTTSHHHHHTC-CCTTCEEEEETTEECTTCBHHHHHHH
T ss_pred CcEEEEEEcCCCCCCCEEEecccCCCC-----CCCCEEEEEECCCCHHHHhCC-CCCCCEEEEECCEECCCCCHHHHHHH
Confidence 56788998865 99999998754221 1237999999999999999 7 99999999999999999999999999
Q ss_pred HhCCCCeEEEEEecCCCC
Q psy4596 236 LLEPCPEILLKIQHDPHP 253 (439)
Q Consensus 236 l~~~~~~v~l~v~r~~~~ 253 (439)
++..+..+.|+|.|++..
T Consensus 98 l~~~~~~v~l~v~r~g~~ 115 (120)
T 2iwo_A 98 LKNASGSIEMQVVAGGDV 115 (120)
T ss_dssp HHHCCSEEEEEEECCTTS
T ss_pred HHcCCCeEEEEEEECCcc
Confidence 998888899999998754
No 108
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=99.38 E-value=4.4e-12 Score=98.01 Aligned_cols=82 Identities=26% Similarity=0.327 Sum_probs=70.7
Q ss_pred eeEEEEEecCC-CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHh
Q psy4596 159 FLQDVVLPKSG-PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALL 237 (439)
Q Consensus 159 ~~~~v~l~~~~-~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~ 237 (439)
..++|.|.|.. +|||+|.+.. ...+||..|.++|+|++.|+|++||.|++|||+++.+++|.+++.+|+
T Consensus 5 ~~k~V~l~K~~~~LG~tI~~~g----------~g~~~I~rI~~gg~a~r~g~L~vGD~I~~VNG~~v~g~~h~evv~lLk 74 (95)
T 3gge_A 5 IEKEVNVYKSEDSLGLTITDNG----------VGYAFIKRIKDGGVIDSVKTICVGDHIESINGENIVGWRHYDVAKKLK 74 (95)
T ss_dssp EEEEEEEECCSSCCCEEEECSS----------SSCCEEEEECTTSHHHHCTTCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred eEEEEEEEECCCCceEEEEcCC----------CCcEEEEEEcCCChHHhcCCCCCCCEEEEECCEEccCCCHHHHHHHHH
Confidence 46788999976 9999998632 124899999999999999999999999999999999999999999999
Q ss_pred C--CCCeEEEEEecC
Q psy4596 238 E--PCPEILLKIQHD 250 (439)
Q Consensus 238 ~--~~~~v~l~v~r~ 250 (439)
. .+..++|.+.+.
T Consensus 75 ~~~~g~~~~L~lv~p 89 (95)
T 3gge_A 75 ELKKEELFTMKLIEP 89 (95)
T ss_dssp HSCTTCEEEEEEEEE
T ss_pred hCCCCCEEEEEEECc
Confidence 6 456788887764
No 109
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.38 E-value=1e-11 Score=101.47 Aligned_cols=95 Identities=28% Similarity=0.426 Sum_probs=79.0
Q ss_pred eeEEEEEecCC--CccEEEeeCCCCCC-CCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHH
Q psy4596 159 FLQDVVLPKSG--PLGFSIIGGTDHSC-IPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLA 235 (439)
Q Consensus 159 ~~~~v~l~~~~--~lG~~i~~~~~~~~-~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~ 235 (439)
..+.|.|.+.. +|||+|.++.+... ...+....|++|..|.++|+|+++|+|++||+|++|||.++.++++.+++..
T Consensus 15 ~~~~v~l~k~~~~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~ 94 (117)
T 2ehr_A 15 PPRIVEIFREPNVSLGISIVGGQTVIKRLKNGEELKGIFIKQVLEDSPAGKTNALKTGDKILEVSGVDLQNASHSEAVEA 94 (117)
T ss_dssp CCEEEEECCCSSSCCCEEECCCCSCCCSSCCCSCCCSEEEEEECSSSTTTSSCSCCTTCEEEEESSCBCTTCCHHHHHHH
T ss_pred CCEEEEEEeCCCCccCEEEeCCcccccccccCCCcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 56789998863 99999998765321 1112234589999999999999999999999999999999999999999999
Q ss_pred HhCCCCeEEEEEecCCCC
Q psy4596 236 LLEPCPEILLKIQHDPHP 253 (439)
Q Consensus 236 l~~~~~~v~l~v~r~~~~ 253 (439)
++..+..+.|+|.|....
T Consensus 95 ~~~~g~~v~l~v~r~~~~ 112 (117)
T 2ehr_A 95 IKNAGNPVVFIVQSLSST 112 (117)
T ss_dssp HHTSCSSEEEEECCBSCC
T ss_pred HHcCCCeEEEEEEECCCC
Confidence 988889999999887654
No 110
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.38 E-value=1.7e-11 Score=98.93 Aligned_cols=92 Identities=33% Similarity=0.546 Sum_probs=76.8
Q ss_pred eeEEEEEecCC-CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHh
Q psy4596 159 FLQDVVLPKSG-PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALL 237 (439)
Q Consensus 159 ~~~~v~l~~~~-~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~ 237 (439)
+...+.+.+.. +|||++.++.+.. ++.....|++|..|.++|||+++| |++||+|++|||.++.++++.+++..++
T Consensus 15 ~~~~~~l~~~~~glG~~i~~g~~~~--~~~~~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~ 91 (110)
T 1x5q_A 15 EELTLTILRQTGGLGISIAGGKGST--PYKGDDEGIFISRVSEEGPAARAG-VRVGDKLLEVNGVALQGAEHHEAVEALR 91 (110)
T ss_dssp EEEEEEEECSSSSCSEEEEECTTSC--CSSTTCCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred ceEEEEEecCCCeeeEEEEccccCC--ccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHhh
Confidence 55677777755 9999999876532 111234589999999999999999 9999999999999999999999888888
Q ss_pred CCCCeEEEEEecCCCC
Q psy4596 238 EPCPEILLKIQHDPHP 253 (439)
Q Consensus 238 ~~~~~v~l~v~r~~~~ 253 (439)
..+..+.|+|.|++..
T Consensus 92 ~~g~~v~l~v~R~g~~ 107 (110)
T 1x5q_A 92 GAGTAVQMRVWRESGP 107 (110)
T ss_dssp SCCSEEEEEEEECSSC
T ss_pred CCCCeEEEEEEECCcc
Confidence 8889999999998754
No 111
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=99.38 E-value=4.4e-12 Score=105.66 Aligned_cols=90 Identities=24% Similarity=0.294 Sum_probs=75.8
Q ss_pred CceeEEEEEecCC-CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhc-CCCCCCCEEEEECCeeCCCCCHHHHHH
Q psy4596 157 SLFLQDVVLPKSG-PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALS-GKLRMGDRILAVNGRDVSKVTHEEAVL 234 (439)
Q Consensus 157 ~~~~~~v~l~~~~-~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~-G~L~~GD~Il~VNg~~v~~~~~~~~~~ 234 (439)
....+.|.|.|.. +|||+|.++.+... ...+++|..|.++++|+++ | |++||+|++|||+++.+++|.+++.
T Consensus 27 ~~~~~~v~l~k~~~glG~~i~gg~~~~~-----~~~~i~I~~V~~gs~A~~agg-L~~GD~Il~Vng~~v~~~~~~~~~~ 100 (130)
T 1i16_A 27 EATVCTVTLEKMSAGLGFSLEGGKGSLH-----GDKPLTINRIFKGAASEQSET-VQPGDEILQLGGTAMQGLTRFEAWN 100 (130)
T ss_dssp SEEEEEEEEETTSSSTTEEEECCCCCSS-----SCCCCEEEEECSSCCCSSSCC-CCTTCCEEECSSCBGGGSCHHHHHH
T ss_pred CCcEEEEEEEcCCCccCEEEecCcCCCC-----CCCCEEEEEECCCCHHHHcCC-CCCCCEEEEECCEECCCCCHHHHHH
Confidence 4467888999866 99999998765321 1347999999999999999 6 9999999999999999999999999
Q ss_pred HHhCCC-CeEEEEEecCCC
Q psy4596 235 ALLEPC-PEILLKIQHDPH 252 (439)
Q Consensus 235 ~l~~~~-~~v~l~v~r~~~ 252 (439)
.++... ..+.|+|.|...
T Consensus 101 ~l~~~~~~~v~l~v~r~~~ 119 (130)
T 1i16_A 101 IIKALPDGPVTIVIRRKSL 119 (130)
T ss_dssp HHHTSCSSEEEEEEEEESS
T ss_pred HHHhCCCceEEEEEEeCCC
Confidence 998764 568999988643
No 112
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.38 E-value=2.4e-12 Score=102.69 Aligned_cols=78 Identities=28% Similarity=0.496 Sum_probs=68.9
Q ss_pred ccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcC--CCe
Q psy4596 264 QEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRYS--GHQ 341 (439)
Q Consensus 264 ~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~--~~~ 341 (439)
+...+|||.+.++.. ...+++|..|.++|||+++|+|++||+|++|||+++.++++.+++++|+.. +..
T Consensus 17 ~~~~g~G~~i~~g~~---------~~~~~~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~g~~ 87 (103)
T 1uep_A 17 RMESGFGFRILGGDE---------PGQPILIGAVIAMGSADRDGRLHPGDELVYVDGIPVAGKTHRYVIDLMHHAARNGQ 87 (103)
T ss_dssp SSSSSCCEEECCCCS---------TTSCCBEEEECTTSTTGGGTCCCTTCEEEEETTEECTTSCHHHHHHHHHHHHHHTE
T ss_pred eCCCccCEEEeeecC---------CCCCeEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCc
Confidence 356779999987542 234799999999999999999999999999999999999999999999986 799
Q ss_pred EEEEEecCC
Q psy4596 342 ISLTVCKGF 350 (439)
Q Consensus 342 v~l~v~r~~ 350 (439)
|.|+|.|..
T Consensus 88 v~l~v~R~~ 96 (103)
T 1uep_A 88 VNLTVRRKV 96 (103)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEeCC
Confidence 999999864
No 113
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=99.38 E-value=2.9e-12 Score=99.53 Aligned_cols=83 Identities=41% Similarity=0.550 Sum_probs=72.2
Q ss_pred eeEEEEEecCC--CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhc-CCCCCCCEEEEECCeeCCCCCHHHHHHH
Q psy4596 159 FLQDVVLPKSG--PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALS-GKLRMGDRILAVNGRDVSKVTHEEAVLA 235 (439)
Q Consensus 159 ~~~~v~l~~~~--~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~-G~L~~GD~Il~VNg~~v~~~~~~~~~~~ 235 (439)
..++|.|.+.. +|||++.++.+. ..|++|..|.++|||+++ | |++||+|++|||.++.++++.+++..
T Consensus 4 ~~~~v~l~k~~~~~lG~~i~~~~~~--------~~g~~V~~V~~~spA~~agg-l~~GD~I~~ing~~v~~~~~~~~~~~ 74 (90)
T 1qav_A 4 QRRRVTVRKADAGGLGISIKGGREN--------KMPILISKIFKGLAADQTEA-LFVGDAILSVNGEDLSSATHDEAVQA 74 (90)
T ss_dssp SCEEEEEECCTTTCCCEEEEEEGGG--------TEEEEEEEECTTSHHHHTTC-CCTTEEEEEETTEECTTCCHHHHHHH
T ss_pred ccEEEEEEeCCCCCcCEEEEcccCC--------CCCEEEEEECCCCHHHhcCC-CCCCCEEEEECCEECCCCCHHHHHHH
Confidence 45778888853 999999986542 237999999999999999 7 99999999999999999999999999
Q ss_pred HhCCCCeEEEEEecC
Q psy4596 236 LLEPCPEILLKIQHD 250 (439)
Q Consensus 236 l~~~~~~v~l~v~r~ 250 (439)
++..+..+.|+|.|.
T Consensus 75 ~~~~~~~v~l~v~r~ 89 (90)
T 1qav_A 75 LKKTGKEVVLEVKYM 89 (90)
T ss_dssp HHTCCSEEEEEEEEC
T ss_pred HHhCCCeEEEEEEEe
Confidence 988888899998874
No 114
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.38 E-value=2.1e-12 Score=101.23 Aligned_cols=85 Identities=32% Similarity=0.470 Sum_probs=73.8
Q ss_pred eeEEEEEecCCCccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHhC
Q psy4596 159 FLQDVVLPKSGPLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALLE 238 (439)
Q Consensus 159 ~~~~v~l~~~~~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~ 238 (439)
..+.|+|.+..+|||.+.++.+. ..+++|..|.++|||+++| |++||+|++|||+++.++++.++...++.
T Consensus 8 ~~~~v~l~~~~~~G~~l~gg~~~--------~~~v~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~ 78 (94)
T 2eeg_A 8 MPHSVTLRGPSPWGFRLVGGRDF--------SAPLTISRVHAGSKAALAA-LCPGDLIQAINGESTELMTHLEAQNRIKG 78 (94)
T ss_dssp CCEEEEECCSSCCSCCEECCTTT--------TSCCEECCCCSSSHHHHTT-CCTTCEEEEETTEETTTCCHHHHHHHHHT
T ss_pred ceEEEEEeCCCccCEEEECccCC--------CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 45678887667999999987653 2368999999999999999 99999999999999999989999888888
Q ss_pred CCCeEEEEEecCCC
Q psy4596 239 PCPEILLKIQHDPH 252 (439)
Q Consensus 239 ~~~~v~l~v~r~~~ 252 (439)
.+..+.|+|.|++.
T Consensus 79 ~g~~v~l~v~R~g~ 92 (94)
T 2eeg_A 79 CHDHLTLSVSSGPS 92 (94)
T ss_dssp CCSCEEEEEECCSS
T ss_pred CCCeEEEEEEeCCC
Confidence 88889999998764
No 115
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=99.38 E-value=1.9e-12 Score=99.99 Aligned_cols=82 Identities=27% Similarity=0.343 Sum_probs=70.0
Q ss_pred eeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcC
Q psy4596 259 ITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRYS 338 (439)
Q Consensus 259 v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~ 338 (439)
+.+.......|||.+.++... ..+++|..|.++|||+++| |++||+|++|||+++.++++.++.++|+..
T Consensus 4 ~~v~~~~~~~lG~~l~~~~~~---------~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 73 (87)
T 2pa1_A 4 LTVDVAGPAPWGFRITGGRDF---------HTPIMVTKVAERGKAKDAD-LRPGDIIVAINGESAEGMLHAEAQSKIRQS 73 (87)
T ss_dssp EEEEECSSSCCSEEEEEEGGG---------TEEEEEEEECSSSHHHHTT-CCTTCEEEEETTEESTTCCHHHHHHHHHTC
T ss_pred EEEEECCCCccCEEEecccCC---------CCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 344445567899999876421 3479999999999999999 999999999999999999999999999997
Q ss_pred CCeEEEEEecCC
Q psy4596 339 GHQISLTVCKGF 350 (439)
Q Consensus 339 ~~~v~l~v~r~~ 350 (439)
...+.|+|.|..
T Consensus 74 ~~~v~l~v~R~~ 85 (87)
T 2pa1_A 74 PSPLRLQLDRIT 85 (87)
T ss_dssp CSSEEEEEEECC
T ss_pred CCeEEEEEEecC
Confidence 799999999863
No 116
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=99.37 E-value=2.7e-12 Score=106.24 Aligned_cols=83 Identities=22% Similarity=0.361 Sum_probs=72.8
Q ss_pred eeeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhc
Q psy4596 258 EITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRY 337 (439)
Q Consensus 258 ~v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~ 337 (439)
++.+.+.....|||++.++.. ...+++|..|.++|||+++|+|++||+|++|||.++.+++|.+++.+|++
T Consensus 22 ~v~l~k~~~~~lG~~i~gg~~---------~~~~~~V~~v~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~ 92 (125)
T 3hpk_A 22 KVTLQKDAQNLIGISIGGGAQ---------YCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQE 92 (125)
T ss_dssp EEEEECCTTSCCCEEEEECSS---------CCSSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHH
T ss_pred EEEEEeCCCCCcCEEEeccCC---------CCCCEEEEEeCCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 455666667789999988752 13479999999999999999999999999999999999999999999999
Q ss_pred CCCeEEEEEecC
Q psy4596 338 SGHQISLTVCKG 349 (439)
Q Consensus 338 ~~~~v~l~v~r~ 349 (439)
.+..+.|+|.|.
T Consensus 93 ~~~~v~l~v~r~ 104 (125)
T 3hpk_A 93 VKGEVTIHYNKL 104 (125)
T ss_dssp SCSEEEEEEEEE
T ss_pred CCCeEEEEEEEC
Confidence 888899999874
No 117
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=99.37 E-value=4.6e-12 Score=102.71 Aligned_cols=85 Identities=26% Similarity=0.471 Sum_probs=74.9
Q ss_pred eeEEEEEecCC-CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHh
Q psy4596 159 FLQDVVLPKSG-PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALL 237 (439)
Q Consensus 159 ~~~~v~l~~~~-~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~ 237 (439)
+.+.|.|.+.. +|||++.++.+. ..|++|..|.++|+|+++|+|++||+|++|||.++.++++.++...++
T Consensus 24 ~~~~v~l~~~~~glG~~l~~~~~~--------~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 95 (112)
T 2r4h_A 24 DFYTVELERGAKGFGFSLRGGREY--------NMDLYVLRLAEDGPAERSGKMRIGDEILEINGETTKNMKHSRAIELIK 95 (112)
T ss_dssp CEEEEEEECBTTBTSEEEEECGGG--------TCCEEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred ceEEEEEEcCCCccCEEEeccccC--------CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 56788888876 999999986542 247999999999999999999999999999999999999999998888
Q ss_pred CCCCeEEEEEecCC
Q psy4596 238 EPCPEILLKIQHDP 251 (439)
Q Consensus 238 ~~~~~v~l~v~r~~ 251 (439)
..+..+.|+|.|++
T Consensus 96 ~~g~~v~l~v~R~~ 109 (112)
T 2r4h_A 96 NGGRRVRLFLKRGE 109 (112)
T ss_dssp TTTTEEEEEEECCE
T ss_pred cCCCeEEEEEEeCC
Confidence 88889999998864
No 118
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=99.37 E-value=2.4e-12 Score=101.37 Aligned_cols=89 Identities=25% Similarity=0.490 Sum_probs=70.8
Q ss_pred ceeeeeeccCcccceeecC-CccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHH
Q psy4596 257 QEITLIRQEGEKLGMHIKG-GLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTL 335 (439)
Q Consensus 257 ~~v~l~~~~~~~lG~~i~~-~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l 335 (439)
+++.+.+.....|||++.+ +.....+ .....+++|..|.++|||+++| |++||+|++|||+++.++++.++..+|
T Consensus 6 r~v~l~k~~~~~~Gf~l~~~g~~~~~~---~~~~~~~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l 81 (96)
T 2ego_A 6 KVLTLEKGDNQTFGFEIQTYGLHHREE---QRVEMVTFVARVHESSPAQLAG-LTPGDTIASVNGLNVEGIRHREIVDII 81 (96)
T ss_dssp EEEEEECCTTCCCSEEEEEEEC----------CCEEEEEEEECTTCHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred EEEEEEeCCCCCccEEEEeccccccCC---CCCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 4556666666789999986 2110001 1123489999999999999999 999999999999999999999999999
Q ss_pred hcCCCeEEEEEecC
Q psy4596 336 RYSGHQISLTVCKG 349 (439)
Q Consensus 336 ~~~~~~v~l~v~r~ 349 (439)
+..+..+.|+|.+.
T Consensus 82 ~~~~~~v~l~v~~~ 95 (96)
T 2ego_A 82 KASGNVLRLETLYG 95 (96)
T ss_dssp HHTTTEEEEEEECC
T ss_pred HhCCCeEEEEEEEC
Confidence 99888999999764
No 119
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.37 E-value=4.5e-12 Score=101.29 Aligned_cols=85 Identities=38% Similarity=0.594 Sum_probs=74.2
Q ss_pred eeEEEEEecC--CCccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHH
Q psy4596 159 FLQDVVLPKS--GPLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLAL 236 (439)
Q Consensus 159 ~~~~v~l~~~--~~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l 236 (439)
..+.|.|.|. ++|||++.++.+. ..|++|..|.++|||+++| |++||+|++|||.++.++++.++...+
T Consensus 15 ~~~~v~l~k~~~~~lG~~~~~~~~~--------~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l 85 (104)
T 1wi2_A 15 LPRIVTLKKPPGAQLGFNIRGGKAS--------QLGIFISKVIPDSDAHRAG-LQEGDQVLAVNDVDFQDIEHSKAVEIL 85 (104)
T ss_dssp CCEEEEECCCTTCCCSEEEECCSSS--------CCCCEEEEECTTSHHHHHT-CCTTCEEEEETTEECSSCCHHHHHHHH
T ss_pred CCEEEEEEeCCCCCccEEEEcccCC--------CCCEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 4578899886 4999999986542 2479999999999999999 999999999999999988899999888
Q ss_pred hCCCCeEEEEEecCCCC
Q psy4596 237 LEPCPEILLKIQHDPHP 253 (439)
Q Consensus 237 ~~~~~~v~l~v~r~~~~ 253 (439)
+. +..+.|+|.|++.+
T Consensus 86 ~~-~~~v~l~v~r~~~~ 101 (104)
T 1wi2_A 86 KT-AREISMRVRFFSGP 101 (104)
T ss_dssp HH-SSSEEEEEECCCCS
T ss_pred hC-CCEEEEEEEECCCC
Confidence 77 78899999998754
No 120
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=99.37 E-value=6.7e-12 Score=96.35 Aligned_cols=80 Identities=31% Similarity=0.436 Sum_probs=68.6
Q ss_pred EEEEecCC-CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHhCC-
Q psy4596 162 DVVLPKSG-PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALLEP- 239 (439)
Q Consensus 162 ~v~l~~~~-~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~- 239 (439)
++++.|.. +|||++.++.+. ..+++|..|.++|||+++|+|++||+|++|||.++.++++.++...++..
T Consensus 3 ~v~l~k~~~g~G~~i~~~~~~--------~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~ 74 (85)
T 2i04_A 3 HTKLRKSSRGFGFTVVGGDEP--------DEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIP 74 (85)
T ss_dssp EEEEECBTTBSSEEEEECCST--------TBCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTSC
T ss_pred EEEEEECCCCCCEEEEcccCC--------CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 56777766 999999886441 34799999999999999999999999999999999999999999888764
Q ss_pred -CCeEEEEEec
Q psy4596 240 -CPEILLKIQH 249 (439)
Q Consensus 240 -~~~v~l~v~r 249 (439)
+..+.|+|.|
T Consensus 75 ~g~~v~l~v~R 85 (85)
T 2i04_A 75 IGASVDLELCR 85 (85)
T ss_dssp TTCEEEEEEEC
T ss_pred CCCeEEEEEEC
Confidence 6788888865
No 121
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.37 E-value=1e-11 Score=102.40 Aligned_cols=79 Identities=25% Similarity=0.563 Sum_probs=69.2
Q ss_pred ccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhc--CCCe
Q psy4596 264 QEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRY--SGHQ 341 (439)
Q Consensus 264 ~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~--~~~~ 341 (439)
+...+|||.+.++.. ...+++|..|.++|+|+++|+|++||+|++|||+++.++++.+++++|+. .+..
T Consensus 27 ~~~~glG~~~~~g~~---------~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~g~~ 97 (123)
T 1ueq_A 27 KSNMGFGFTIIGGDE---------PDEFLQVKSVIPDGPAAQDGKMETGDVIVYINEVCVLGHTHADVVKLFQSVPIGQS 97 (123)
T ss_dssp CCTTSCSEEEECCSS---------SSCCCEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTSCHHHHHHHHHTSCTTCE
T ss_pred eCCCceeEEEecccC---------CCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCe
Confidence 345689999987542 24479999999999999999999999999999999999999999999998 5789
Q ss_pred EEEEEecCCc
Q psy4596 342 ISLTVCKGFE 351 (439)
Q Consensus 342 v~l~v~r~~~ 351 (439)
+.|+|.|...
T Consensus 98 v~l~v~R~~~ 107 (123)
T 1ueq_A 98 VNLVLCRGYP 107 (123)
T ss_dssp EEEEEEESCC
T ss_pred EEEEEEeCCC
Confidence 9999998753
No 122
>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=99.37 E-value=3.1e-12 Score=104.88 Aligned_cols=88 Identities=25% Similarity=0.473 Sum_probs=71.5
Q ss_pred eeeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhc
Q psy4596 258 EITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRY 337 (439)
Q Consensus 258 ~v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~ 337 (439)
.+.+.+.....|||.+.++... ...+++|..|.++|||+++|+|++||+|++|||+++.+++|.+++.+|+.
T Consensus 18 ~v~l~~~~~~~lG~~i~g~~~~--------~~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~ 89 (119)
T 1x6d_A 18 VTILHKEEGAGLGFSLAGGADL--------ENKVITVHRVFPNGLASQEGTIQKGNEVLSINGKSLKGTTHHDALAILRQ 89 (119)
T ss_dssp EEEEECCTTSCCSEEEECCSSS--------SCSSCEEEEECSSSHHHHHTSSCTTCBCCEETTEECSSCCHHHHHHHHHH
T ss_pred EEEEEeCCCCccCEEEeCCCCC--------CCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 4445565678899999876421 13489999999999999999999999999999999999999999999998
Q ss_pred CCCe-EEEEEecCCccC
Q psy4596 338 SGHQ-ISLTVCKGFERG 353 (439)
Q Consensus 338 ~~~~-v~l~v~r~~~~~ 353 (439)
.+.. +.|++.|.....
T Consensus 90 ~~~~~~~l~v~R~~~~~ 106 (119)
T 1x6d_A 90 AREPRQAVIVTRKLTPE 106 (119)
T ss_dssp TTSSSEEEEEEECCCSS
T ss_pred CCCCeEEEEEEcCCCcc
Confidence 7654 457777765433
No 123
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=99.37 E-value=2.7e-12 Score=98.58 Aligned_cols=75 Identities=24% Similarity=0.368 Sum_probs=66.1
Q ss_pred cCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCeEEE
Q psy4596 265 EGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRYSGHQISL 344 (439)
Q Consensus 265 ~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l 344 (439)
....|||.+.++... ..+++|..|.++|||+++| |++||+|++|||.++.++++.+++..++..+..+.|
T Consensus 9 ~~~~~G~~l~gg~~~---------~~~v~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l 78 (85)
T 1rgw_A 9 GPGPWGFRLQGGKDF---------NMPLTISRITPGSKAAQSQ-LSQGDLVVAIDGVNTDTMTHLEAQNKIKSASYNLSL 78 (85)
T ss_dssp CSSCCCEEECCCGGG---------TSCCBEEEECTTSHHHHSS-CCCCSBEEEETTEECTTCCHHHHHHHHTTCSSCEEE
T ss_pred CCCccCEEEEeccCC---------CCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHHcCCCeEEE
Confidence 346799999876421 3479999999999999999 999999999999999999999999999988888999
Q ss_pred EEecC
Q psy4596 345 TVCKG 349 (439)
Q Consensus 345 ~v~r~ 349 (439)
+|.|.
T Consensus 79 ~v~R~ 83 (85)
T 1rgw_A 79 TLQKS 83 (85)
T ss_dssp EEESC
T ss_pred EEEeC
Confidence 99875
No 124
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=99.37 E-value=2.9e-12 Score=100.58 Aligned_cols=85 Identities=27% Similarity=0.414 Sum_probs=71.7
Q ss_pred eeEEEEEecCC-CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHh
Q psy4596 159 FLQDVVLPKSG-PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALL 237 (439)
Q Consensus 159 ~~~~v~l~~~~-~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~ 237 (439)
..+.|.|.+.. +|||.+....+ ..+++|..|.++|||+++| |++||+|++|||.++.++++.++...++
T Consensus 5 ~~r~v~l~~~~~~~G~~l~~~~~---------~~~~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~ 74 (95)
T 3r68_A 5 QPRVVVIKKGSNGYGFYLRAGPE---------QKGQIIKDIEPGSPAEAAG-LKNNDLVVAVNGKSVEALDHDGVVEMIR 74 (95)
T ss_dssp CCEEEEEECBTTBCSCEEEEC-----------CCSEEEECCCTTSHHHHHT-CCTTEEEEEETTEECTTCCHHHHHHHHH
T ss_pred CcEEEEEecCCCcccEEEEecCC---------CCCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 45778888876 99999987543 2379999999999999999 9999999999999999999999999999
Q ss_pred CCCCeEEEEEecCCCC
Q psy4596 238 EPCPEILLKIQHDPHP 253 (439)
Q Consensus 238 ~~~~~v~l~v~r~~~~ 253 (439)
..+..+.+++.|....
T Consensus 75 ~~~~~~~~~~~r~~~~ 90 (95)
T 3r68_A 75 KGGDQTTLLVLDKELE 90 (95)
T ss_dssp TTTTEEEEEEEECC--
T ss_pred hCCCeEEEEEECCccc
Confidence 8888888888776543
No 125
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.37 E-value=4e-12 Score=104.43 Aligned_cols=91 Identities=36% Similarity=0.661 Sum_probs=77.9
Q ss_pred eeEEEEEecCC-CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHh
Q psy4596 159 FLQDVVLPKSG-PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALL 237 (439)
Q Consensus 159 ~~~~v~l~~~~-~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~ 237 (439)
..+.|.|.|.. +|||+|.++.+.... ....|++|..|.++|+|+++|+|++||+|++|||.++.++++.+++..++
T Consensus 17 ~~~~v~l~r~~~~lG~~i~~~~~~~~~---~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~ 93 (120)
T 2eno_A 17 TEEEINLTRGPSGLGFNIVGGTDQQYV---SNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFR 93 (120)
T ss_dssp EEEEEEEECCSSSCSEEEECCTTTCSS---SSCCSEEEEEECSSSHHHHSCCSCTTCEEEEETTEECCSCCHHHHHHHHH
T ss_pred ceEEEEEEECCCCCCEEEecccCCccc---cCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 67788999876 999999987654221 12458999999999999999999999999999999999999999998888
Q ss_pred CCCCeEEEEEecCCC
Q psy4596 238 EPCPEILLKIQHDPH 252 (439)
Q Consensus 238 ~~~~~v~l~v~r~~~ 252 (439)
..+..+.|+|.|++.
T Consensus 94 ~~g~~v~l~v~R~~~ 108 (120)
T 2eno_A 94 NAGYAVSLRVQHRLQ 108 (120)
T ss_dssp HHCSEEEEEEEEEEE
T ss_pred cCCCeEEEEEEeCCc
Confidence 778889999998754
No 126
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=99.37 E-value=2.4e-12 Score=101.76 Aligned_cols=89 Identities=26% Similarity=0.404 Sum_probs=73.9
Q ss_pred eeeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhc
Q psy4596 258 EITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRY 337 (439)
Q Consensus 258 ~v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~ 337 (439)
.+.+.+....+|||++.++.....+ .....+++|..|.++|||+++|+|++||+|++|||+++.++++.++..+|+.
T Consensus 8 ~v~l~k~~~~glG~~i~~~~~~~~~---~~~~~g~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~ 84 (98)
T 1ihj_A 8 MVTLDKTGKKSFGICIVRGEVKDSP---NTKTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIKE 84 (98)
T ss_dssp EEEEECTTSSSCCEEEEEEEECCSS---SCCEEEEEEEEECTTSHHHHHCSCCTTCEEEEETTEECTTCCHHHHHHHHHH
T ss_pred EEEEEeCCCCCcCEEEeccccCCcc---ccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhc
Confidence 4555555677899999876532211 0123489999999999999999999999999999999999999999999999
Q ss_pred CCCeEEEEEecC
Q psy4596 338 SGHQISLTVCKG 349 (439)
Q Consensus 338 ~~~~v~l~v~r~ 349 (439)
.+..+.|+|.|.
T Consensus 85 ~g~~v~l~v~R~ 96 (98)
T 1ihj_A 85 ADFKIELEIQTF 96 (98)
T ss_dssp SCSEEEEEEEEC
T ss_pred CCCeEEEEEEeC
Confidence 899999999885
No 127
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=99.37 E-value=4.5e-12 Score=100.13 Aligned_cols=91 Identities=36% Similarity=0.567 Sum_probs=75.3
Q ss_pred eeEEEEEecCC--CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHH
Q psy4596 159 FLQDVVLPKSG--PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLAL 236 (439)
Q Consensus 159 ~~~~v~l~~~~--~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l 236 (439)
..+.|+|.|.+ +|||++.++.+.... .....|++|..|.++|||+++|+|++||+|++|||.++.++++.++...+
T Consensus 5 ~~~~v~l~k~~~~glG~~i~~~~~~~~~--~~~~~g~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l 82 (98)
T 1ihj_A 5 LIHMVTLDKTGKKSFGICIVRGEVKDSP--NTKTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLI 82 (98)
T ss_dssp EEEEEEEECTTSSSCCEEEEEEEECCSS--SCCEEEEEEEEECTTSHHHHHCSCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred eEEEEEEEeCCCCCcCEEEeccccCCcc--ccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 45778898843 999999987653210 01123899999999999999999999999999999999999999999888
Q ss_pred hCCCCeEEEEEecCC
Q psy4596 237 LEPCPEILLKIQHDP 251 (439)
Q Consensus 237 ~~~~~~v~l~v~r~~ 251 (439)
+..+..+.|+|.|++
T Consensus 83 ~~~g~~v~l~v~R~g 97 (98)
T 1ihj_A 83 KEADFKIELEIQTFD 97 (98)
T ss_dssp HHSCSEEEEEEEEC-
T ss_pred hcCCCeEEEEEEeCC
Confidence 888899999999875
No 128
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=99.37 E-value=1.4e-12 Score=108.46 Aligned_cols=94 Identities=33% Similarity=0.565 Sum_probs=79.2
Q ss_pred eeEEEEEecC---CCccEEEeeCCCCCCCCCCCC-CCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHH
Q psy4596 159 FLQDVVLPKS---GPLGFSIIGGTDHSCIPFGQH-KPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVL 234 (439)
Q Consensus 159 ~~~~v~l~~~---~~lG~~i~~~~~~~~~~~g~~-~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~ 234 (439)
..+.|.|.|. ++|||++.++.+....+++.. ..|++|..|.++|+|+++|+|++||+|++|||.++.++++.+++.
T Consensus 29 ~~r~v~l~k~~~~~~lG~~i~~~~~~~~~~~g~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~ 108 (128)
T 1nf3_C 29 THRRVRLCKYGTEKPLGFYIRDGSSVRVTPHGLEKVPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVTD 108 (128)
T ss_dssp TCEEEEECCSSTTSCCCEEEEEEEEEEEETTEEEEEEEEEEEEECTTCHHHHHTCCCTTCEEEEETTEESTTCCHHHHHH
T ss_pred ccEEEEEEECCCCCCccEEEEccccccccccccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 5678899987 389999998876444444321 247999999999999999988999999999999999999999999
Q ss_pred HHhCCCCeEEEEEecCCC
Q psy4596 235 ALLEPCPEILLKIQHDPH 252 (439)
Q Consensus 235 ~l~~~~~~v~l~v~r~~~ 252 (439)
.++..+..+.|+|.|.+.
T Consensus 109 ~l~~~~~~v~l~v~r~~~ 126 (128)
T 1nf3_C 109 MMIANSRNLIITVRPANQ 126 (128)
T ss_dssp HHHHTTTSEEEEEECCCC
T ss_pred HHHcCCCeEEEEEEECCc
Confidence 998777889999998764
No 129
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=99.37 E-value=6e-12 Score=99.20 Aligned_cols=80 Identities=30% Similarity=0.552 Sum_probs=69.0
Q ss_pred eccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCeE
Q psy4596 263 RQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRYSGHQI 342 (439)
Q Consensus 263 ~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v 342 (439)
.+....|||++.++.. ...+++|..|.++|||+++|+|++||+|++|||+++.++++.++..+|+..+..+
T Consensus 12 ~~~~~~lG~~i~~~~~---------~~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g~~v 82 (97)
T 1n7e_A 12 KRYGGPLGITISGTEE---------PFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETV 82 (97)
T ss_dssp ECTTSCCCEEEECCSS---------TTSCCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEE
T ss_pred EeCCCCcCEEEEcccC---------CCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence 3345669999987531 1248999999999999999999999999999999999999999999999888999
Q ss_pred EEEEecCCc
Q psy4596 343 SLTVCKGFE 351 (439)
Q Consensus 343 ~l~v~r~~~ 351 (439)
.|+|.|...
T Consensus 83 ~l~v~R~~~ 91 (97)
T 1n7e_A 83 TLKIKKQTD 91 (97)
T ss_dssp EEEEECCCC
T ss_pred EEEEEeCCC
Confidence 999988643
No 130
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.37 E-value=3.8e-12 Score=101.74 Aligned_cols=83 Identities=33% Similarity=0.522 Sum_probs=71.6
Q ss_pred ceeeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHh
Q psy4596 257 QEITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLR 336 (439)
Q Consensus 257 ~~v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~ 336 (439)
+++.+.+.....|||.+.++.. ...+++|..|.++|||+++| |++||+|++|||+++.++++.+++++|+
T Consensus 17 ~~v~l~k~~~~~lG~~~~~~~~---------~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~ 86 (104)
T 1wi2_A 17 RIVTLKKPPGAQLGFNIRGGKA---------SQLGIFISKVIPDSDAHRAG-LQEGDQVLAVNDVDFQDIEHSKAVEILK 86 (104)
T ss_dssp EEEEECCCTTCCCSEEEECCSS---------SCCCCEEEEECTTSHHHHHT-CCTTCEEEEETTEECSSCCHHHHHHHHH
T ss_pred EEEEEEeCCCCCccEEEEcccC---------CCCCEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHh
Confidence 4566666666889999987542 13589999999999999999 9999999999999999999999999999
Q ss_pred cCCCeEEEEEecCC
Q psy4596 337 YSGHQISLTVCKGF 350 (439)
Q Consensus 337 ~~~~~v~l~v~r~~ 350 (439)
. +..+.|+|.|..
T Consensus 87 ~-~~~v~l~v~r~~ 99 (104)
T 1wi2_A 87 T-AREISMRVRFFS 99 (104)
T ss_dssp H-SSSEEEEEECCC
T ss_pred C-CCEEEEEEEECC
Confidence 8 789999998864
No 131
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.37 E-value=3.5e-12 Score=99.72 Aligned_cols=85 Identities=40% Similarity=0.661 Sum_probs=73.2
Q ss_pred eEEEEEecCC-CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHhC
Q psy4596 160 LQDVVLPKSG-PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALLE 238 (439)
Q Consensus 160 ~~~v~l~~~~-~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~ 238 (439)
.+.|+|.|.. +|||++.++.+. ..+++|..|.++|||+++|.|++||+|++|||.++.++++.++...++.
T Consensus 6 ~r~v~l~k~~~glG~~l~~~~~~--------~~~~~V~~V~~~spA~~aGgl~~GD~I~~vng~~v~~~~~~~~~~~~~~ 77 (93)
T 2dkr_A 6 SGVVELPKTDEGLGFNIMGGKEQ--------NSPIYISRVIPGGVADRHGGLKRGDQLLSVNGVSVEGEQHEKAVELLKA 77 (93)
T ss_dssp SCEEEEECCTTCCCEEEECSSSS--------SCCCEEEEECTTSHHHHHCCCCTTCBEEEETTEECTTSCHHHHHHHHHH
T ss_pred CEEEEEEeCCCCccEEEecccCC--------CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 4678888877 999999976542 2479999999999999994499999999999999999999999988887
Q ss_pred CCCeEEEEEecCCC
Q psy4596 239 PCPEILLKIQHDPH 252 (439)
Q Consensus 239 ~~~~v~l~v~r~~~ 252 (439)
.+..+.|+|.|++.
T Consensus 78 ~~~~v~l~v~r~~~ 91 (93)
T 2dkr_A 78 AQGSVKLVVRSGPS 91 (93)
T ss_dssp CCSEEEEEECCCCS
T ss_pred CCCcEEEEEEeCCC
Confidence 77789999998764
No 132
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=99.37 E-value=4.5e-12 Score=110.34 Aligned_cols=89 Identities=34% Similarity=0.507 Sum_probs=76.5
Q ss_pred CceeEEEEEecCC-CccEEEee---CCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHH
Q psy4596 157 SLFLQDVVLPKSG-PLGFSIIG---GTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEA 232 (439)
Q Consensus 157 ~~~~~~v~l~~~~-~lG~~i~~---~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~ 232 (439)
......|.|.|.. +|||+|.+ +.+. +....|++|..|.++|+|+++|+|++||+|++|||.++.+++|.++
T Consensus 78 ~~~~~~v~l~k~~~glG~~i~g~~~g~~~-----~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~VNG~~v~~~~~~~~ 152 (170)
T 3egg_C 78 RLELFPVELEKDSEGLGISIIGMGAGADM-----GLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFA 152 (170)
T ss_dssp TSEEEEEEEECBTTBSSEEEEEECSSSSC-----CSSSBEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTBCHHHH
T ss_pred CceEEEEEEEeCCCeEeEEEEecccCCcc-----ccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHH
Confidence 4467788898876 99999998 3221 1224589999999999999999999999999999999999999999
Q ss_pred HHHHhCCCCeEEEEEecC
Q psy4596 233 VLALLEPCPEILLKIQHD 250 (439)
Q Consensus 233 ~~~l~~~~~~v~l~v~r~ 250 (439)
+..|+..+..+.|+|.|+
T Consensus 153 ~~~l~~~g~~v~L~V~R~ 170 (170)
T 3egg_C 153 ASVLRNTKGRVRFMIGRE 170 (170)
T ss_dssp HHHHHHCCSEEEEEEEEC
T ss_pred HHHHHcCCCEEEEEEEeC
Confidence 999998889999999884
No 133
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=99.37 E-value=2.2e-12 Score=107.53 Aligned_cols=86 Identities=21% Similarity=0.384 Sum_probs=70.2
Q ss_pred eeeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhc
Q psy4596 258 EITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRY 337 (439)
Q Consensus 258 ~v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~ 337 (439)
++.+.+ ...+|||+|.++..... ...++||..|.++|||+++|.|++||+|++|||+++.+++|++++++|+.
T Consensus 32 ~v~l~k-~~~glG~~i~gg~~~~~------~~~~i~I~~V~~gs~A~~aggL~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 104 (130)
T 1i16_A 32 TVTLEK-MSAGLGFSLEGGKGSLH------GDKPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIKA 104 (130)
T ss_dssp EEEEET-TSSSTTEEEECCCCCSS------SCCCCEEEEECSSCCCSSSCCCCTTCCEEECSSCBGGGSCHHHHHHHHHT
T ss_pred EEEEEc-CCCccCEEEecCcCCCC------CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 444444 36789999998753211 23479999999999999994499999999999999999999999999999
Q ss_pred CC-CeEEEEEecCC
Q psy4596 338 SG-HQISLTVCKGF 350 (439)
Q Consensus 338 ~~-~~v~l~v~r~~ 350 (439)
++ ..+.|+|.|..
T Consensus 105 ~~~~~v~l~v~r~~ 118 (130)
T 1i16_A 105 LPDGPVTIVIRRKS 118 (130)
T ss_dssp SCSSEEEEEEEEES
T ss_pred CCCceEEEEEEeCC
Confidence 75 56999998863
No 134
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=99.36 E-value=3.7e-12 Score=100.22 Aligned_cols=81 Identities=21% Similarity=0.379 Sum_probs=69.8
Q ss_pred eeeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhc
Q psy4596 258 EITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRY 337 (439)
Q Consensus 258 ~v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~ 337 (439)
++.+.+....+|||.+.+. ..|++|.+|.++|||+++|+|++||+|++|||+++.++++.++..+++.
T Consensus 11 ~v~l~~~~~~glG~~~~~~------------~~gv~V~~V~~~spA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~~~~ 78 (96)
T 2qkv_A 11 NVDLMKKAGKELGLSLSPN------------EIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVSYALFKG 78 (96)
T ss_dssp EEEEECBTTBCCCEEEEEC------------SSSEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHHT
T ss_pred EEEEEeCCCCCccEEEEeC------------CCcEEEEEeCCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHhc
Confidence 3444455667899988651 2489999999999999999999999999999999999999999999999
Q ss_pred CCCeEEEEEecCC
Q psy4596 338 SGHQISLTVCKGF 350 (439)
Q Consensus 338 ~~~~v~l~v~r~~ 350 (439)
.+..+.|+|.|..
T Consensus 79 ~~~~v~l~v~R~~ 91 (96)
T 2qkv_A 79 ANGKVSMEVTRPK 91 (96)
T ss_dssp CSSEEEEEEECCC
T ss_pred CCCcEEEEEEeCC
Confidence 8899999999864
No 135
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=99.36 E-value=4.6e-12 Score=98.66 Aligned_cols=78 Identities=26% Similarity=0.307 Sum_probs=66.7
Q ss_pred eeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcC
Q psy4596 259 ITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRYS 338 (439)
Q Consensus 259 v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~ 338 (439)
+.+.+ ...+|||.+.+. .+++|..|.++|||+++| |++||+|++|||+++.++++.++..+|+..
T Consensus 7 v~l~~-~~~g~G~~l~~~-------------~~~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~l~~~ 71 (91)
T 2f5y_A 7 ITIPR-GKDGFGFTICCD-------------SPVRVQAVDSGGPAERAG-LQQLDTVLQLNERPVEHWKCVELAHEIRSC 71 (91)
T ss_dssp EEEEC-BTTBTSEEEECS-------------SSCEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTC
T ss_pred EEEEe-CCCCccEEEecC-------------CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 34443 346799998753 269999999999999999 999999999999999999999999999988
Q ss_pred CCeEEEEEecCCc
Q psy4596 339 GHQISLTVCKGFE 351 (439)
Q Consensus 339 ~~~v~l~v~r~~~ 351 (439)
+..+.|+|.|..+
T Consensus 72 ~~~v~l~v~R~~~ 84 (91)
T 2f5y_A 72 PSEIILLVWRMVP 84 (91)
T ss_dssp SSEEEEEEEECC-
T ss_pred CCeEEEEEEeCCC
Confidence 8899999998643
No 136
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.36 E-value=5.6e-12 Score=103.55 Aligned_cols=89 Identities=40% Similarity=0.642 Sum_probs=73.6
Q ss_pred eeeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhc
Q psy4596 258 EITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRY 337 (439)
Q Consensus 258 ~v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~ 337 (439)
++.+.+. ...|||++.++.... ......+++|..|.++|||+++|+|++||+|++|||+++.+++|.+++.+++.
T Consensus 20 ~v~l~r~-~~~lG~~i~~~~~~~----~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~ 94 (120)
T 2eno_A 20 EINLTRG-PSGLGFNIVGGTDQQ----YVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRN 94 (120)
T ss_dssp EEEEECC-SSSCSEEEECCTTTC----SSSSCCSEEEEEECSSSHHHHSCCSCTTCEEEEETTEECCSCCHHHHHHHHHH
T ss_pred EEEEEEC-CCCCCEEEecccCCc----cccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 4444444 478999999865321 11124589999999999999999999999999999999999999999999998
Q ss_pred CCCeEEEEEecCCc
Q psy4596 338 SGHQISLTVCKGFE 351 (439)
Q Consensus 338 ~~~~v~l~v~r~~~ 351 (439)
.+..+.|+|.|...
T Consensus 95 ~g~~v~l~v~R~~~ 108 (120)
T 2eno_A 95 AGYAVSLRVQHRLQ 108 (120)
T ss_dssp HCSEEEEEEEEEEE
T ss_pred CCCeEEEEEEeCCc
Confidence 88999999998654
No 137
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=99.36 E-value=3.1e-12 Score=98.96 Aligned_cols=76 Identities=21% Similarity=0.428 Sum_probs=67.1
Q ss_pred ccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCeEE
Q psy4596 264 QEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRYSGHQIS 343 (439)
Q Consensus 264 ~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~ 343 (439)
.....|||++.++.. ...+++|..|.++|||+++| |++||+|++|||.++.++++.++..+++..+..+.
T Consensus 10 ~~~~~~G~~l~~g~~---------~~~~~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~ 79 (88)
T 2uzc_A 10 VGPAPWGFRLQGGKD---------FNMPLTISSLKDGGKAAQAN-VRIGDVVLSIDGINAQGMTHLEAQNKIKGCTGSLN 79 (88)
T ss_dssp ESSSCCCEEEEEEGG---------GTEEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEE
T ss_pred cCCCcccEEEECcCC---------CCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEE
Confidence 345679999987642 13479999999999999999 99999999999999999999999999998889999
Q ss_pred EEEecC
Q psy4596 344 LTVCKG 349 (439)
Q Consensus 344 l~v~r~ 349 (439)
|+|.|.
T Consensus 80 l~v~R~ 85 (88)
T 2uzc_A 80 MTLQRE 85 (88)
T ss_dssp EEEECC
T ss_pred EEEEeC
Confidence 999885
No 138
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=99.36 E-value=2.6e-12 Score=99.35 Aligned_cols=71 Identities=24% Similarity=0.438 Sum_probs=63.9
Q ss_pred cCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCeEEE
Q psy4596 265 EGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRYSGHQISL 344 (439)
Q Consensus 265 ~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l 344 (439)
....|||.+.+ ++||..|.++|||+++|+|++||+|++|||+++.+++|++++++|+++++.+.|
T Consensus 11 ~~~~~G~~~~~---------------gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~i~~~~~~v~L 75 (88)
T 3e17_A 11 ANEEYGLRLGS---------------QIFVKEMTRTGLATKDGNLHEGDIILKINGTVTENMSLTDARKLIEKSRGKLQL 75 (88)
T ss_dssp TBCCCCEEEEE---------------EEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHTTTEEEE
T ss_pred CCCCCCEEEeC---------------CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEE
Confidence 34578888743 699999999999999999999999999999999999999999999999999999
Q ss_pred EEecCC
Q psy4596 345 TVCKGF 350 (439)
Q Consensus 345 ~v~r~~ 350 (439)
++.+..
T Consensus 76 ~v~~~~ 81 (88)
T 3e17_A 76 VVLRDL 81 (88)
T ss_dssp EECCC-
T ss_pred EEeCCC
Confidence 998753
No 139
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=99.36 E-value=8.8e-12 Score=104.03 Aligned_cols=93 Identities=28% Similarity=0.427 Sum_probs=76.0
Q ss_pred eeEEEEEecCC--CccEEEeeCCCCCC----CCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHH
Q psy4596 159 FLQDVVLPKSG--PLGFSIIGGTDHSC----IPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEA 232 (439)
Q Consensus 159 ~~~~v~l~~~~--~lG~~i~~~~~~~~----~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~ 232 (439)
..+.|+|.|.+ +|||+|.++.+... .+......|++|..|.++|+|+++| |++||+|++|||+++.++++.++
T Consensus 27 ~~r~v~l~r~~~~g~Gf~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~gspA~~aG-L~~GD~Il~Vng~~v~~~~~~~~ 105 (132)
T 3l4f_D 27 KEKTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAG-LRMGDFLIEVNGQNVVKVGHRQV 105 (132)
T ss_dssp CCCEEEEECCTTSCCCEEEEEECCSSCCSCCCCCTTSCCSEEEEEECTTSGGGGGT-CCTTCEEEEESSSBCTTSCHHHH
T ss_pred CCEEEEEEECCCCcEeEEEeccCCCCccccccccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHH
Confidence 45678888854 99999999865311 0011122379999999999999999 99999999999999999999999
Q ss_pred HHHHhCCCCeEEEEEecCCC
Q psy4596 233 VLALLEPCPEILLKIQHDPH 252 (439)
Q Consensus 233 ~~~l~~~~~~v~l~v~r~~~ 252 (439)
+..++..+..+.|+|.+...
T Consensus 106 ~~~l~~~g~~v~l~v~~~~~ 125 (132)
T 3l4f_D 106 VNMIRQGGNTLMVKVVMVTR 125 (132)
T ss_dssp HHHHHHTTTEEEEEEECCCC
T ss_pred HHHHHcCCCEEEEEEEECCC
Confidence 99998888899999988654
No 140
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.36 E-value=5.1e-12 Score=104.41 Aligned_cols=87 Identities=29% Similarity=0.453 Sum_probs=76.6
Q ss_pred eeEEEEEecCC-CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHh
Q psy4596 159 FLQDVVLPKSG-PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALL 237 (439)
Q Consensus 159 ~~~~v~l~~~~-~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~ 237 (439)
..+.|.|.+.. +|||++.++.+.. ..|++|..|.++|||+++|+|++||+|++|||.++.++++.+++..++
T Consensus 25 ~~~~v~l~k~~~glG~~l~~~~~~~-------~~gv~V~~V~~~spA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~ 97 (124)
T 2daz_A 25 ELHIIELEKDKNGLGLSLAGNKDRS-------RMSIFVVGINPEGPAAADGRMRIGDELLEINNQILYGRSHQNASAIIK 97 (124)
T ss_dssp EEEEEEEECCSSCCCEEEECBSSTT-------SCCEEEEEECTTSHHHHHTCCCTTCEECEESSCBCTTSCHHHHHHHHH
T ss_pred ceEEEEEEeCCCccCEEEeccCCCC-------cCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 56788999877 9999999875531 348999999999999999999999999999999999999999998888
Q ss_pred CCCCeEEEEEecCCC
Q psy4596 238 EPCPEILLKIQHDPH 252 (439)
Q Consensus 238 ~~~~~v~l~v~r~~~ 252 (439)
..+..+.|+|.|++.
T Consensus 98 ~~~~~v~l~v~R~~~ 112 (124)
T 2daz_A 98 TAPSKVKLVFIRNED 112 (124)
T ss_dssp HSCSEEEEEEEECTT
T ss_pred cCCCeEEEEEEeCCC
Confidence 777899999998764
No 141
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=99.36 E-value=6.8e-12 Score=100.99 Aligned_cols=94 Identities=29% Similarity=0.424 Sum_probs=76.9
Q ss_pred CceeEEEEEe--cCC-CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHH
Q psy4596 157 SLFLQDVVLP--KSG-PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAV 233 (439)
Q Consensus 157 ~~~~~~v~l~--~~~-~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~ 233 (439)
++....+.|. +.. +|||++.++.+.... ....|++|..|.++|||+++|+|++||+|++|||.++.++++.++.
T Consensus 10 ~~~~~~v~l~r~~~~~~lG~~~~~~~~~~~~---~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~ 86 (108)
T 2jre_A 10 GFSLYSVELFREKDTSSLGISISGMRDQSTT---GEATGIYVKSLIPGSAAALDGRIEPNDKILRVDDVNVQGMAQSDVV 86 (108)
T ss_dssp SCEEEEEEEECCSTTSCCSEEEECCCCCSCS---SCCCCCEEEEECTTSHHHHHSSCCSSEEEEEETTEECTTSCHHHHH
T ss_pred CcEEEEEEEEecCCCCCcCEEEEcccCCCCC---CCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHH
Confidence 4467788884 333 899999987653221 1234899999999999999999999999999999999988899999
Q ss_pred HHHhCCCCeEEEEEecCCCC
Q psy4596 234 LALLEPCPEILLKIQHDPHP 253 (439)
Q Consensus 234 ~~l~~~~~~v~l~v~r~~~~ 253 (439)
..++..+..+.|+|.|++..
T Consensus 87 ~~l~~~g~~v~l~v~R~~~~ 106 (108)
T 2jre_A 87 EVLRNAGNPVRLLLIRRLPL 106 (108)
T ss_dssp HHHHHHCSEEEEEEEECCCC
T ss_pred HHHHcCCCeEEEEEEeCCcC
Confidence 88877788999999987643
No 142
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.36 E-value=3.1e-12 Score=99.62 Aligned_cols=81 Identities=26% Similarity=0.437 Sum_probs=70.5
Q ss_pred ceeeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHh
Q psy4596 257 QEITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLR 336 (439)
Q Consensus 257 ~~v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~ 336 (439)
+.+.+.+.....|||++.+. ..+++|..|.++|||+++|.|++||+|++|||+++ +.+++++.++|+
T Consensus 8 r~v~l~k~~~~~lG~~i~~~------------~~~v~V~~V~~~spA~~ag~L~~GD~I~~ing~~v-~~~~~~~~~~l~ 74 (91)
T 2e7k_A 8 RMVGIRKTAGEHLGVTFRVE------------GGELVIARILHGGMVAQQGLLHVGDIIKEVNGQPV-GSDPRALQELLR 74 (91)
T ss_dssp CBCCBCCCTTCCCCEEEEES------------SSSEEEEEECSSSHHHHHCCCCTTCEEEEETTEEC-TTCHHHHHHHHH
T ss_pred EEEEEEECCCCcEeEEEEec------------CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEC-CCCHHHHHHHHH
Confidence 44556666678899999762 24899999999999999877999999999999999 999999999999
Q ss_pred cCCCeEEEEEecCC
Q psy4596 337 YSGHQISLTVCKGF 350 (439)
Q Consensus 337 ~~~~~v~l~v~r~~ 350 (439)
..+..+.|+|.|..
T Consensus 75 ~~~~~v~l~v~~~~ 88 (91)
T 2e7k_A 75 NASGSVILKILSGP 88 (91)
T ss_dssp TCCSSBCEEEECCS
T ss_pred cCCCeEEEEEEECC
Confidence 98889999998764
No 143
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.36 E-value=4.5e-12 Score=102.56 Aligned_cols=77 Identities=32% Similarity=0.636 Sum_probs=68.5
Q ss_pred ccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCeEE
Q psy4596 264 QEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRYSGHQIS 343 (439)
Q Consensus 264 ~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~ 343 (439)
+....|||.+.++. +.+++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+|+..+..+.
T Consensus 23 ~~~~~lG~~l~~~~-----------~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g~~v~ 91 (111)
T 2dlu_A 23 NDGSGLGFGIVGGK-----------TSGVVVRTIVPGGLADRDGRLQTGDHILKIGGTNVQGMTSEQVAQVLRNCGNSVR 91 (111)
T ss_dssp CCSSCCCEEEECCS-----------SSSBEEEEECTTSSHHHHTCCCSSCEEEEESSCCCTTSCHHHHHHHHHHHCSEEE
T ss_pred eCCCccCEEEeccC-----------CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEE
Confidence 34567999998653 3489999999999999999999999999999999999999999999998889999
Q ss_pred EEEecCCc
Q psy4596 344 LTVCKGFE 351 (439)
Q Consensus 344 l~v~r~~~ 351 (439)
|+|.|...
T Consensus 92 l~v~R~~~ 99 (111)
T 2dlu_A 92 MLVARDPA 99 (111)
T ss_dssp EEEEESCT
T ss_pred EEEEeCCC
Confidence 99988643
No 144
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.36 E-value=9.5e-12 Score=101.18 Aligned_cols=91 Identities=30% Similarity=0.456 Sum_probs=74.2
Q ss_pred ceeeeeeccCcccceeecCCccCC-CCCCCCCCCCCeEEEEeCCCCchhh-cCCCCCCCEEEEECCEEcCCCCHHHHHHH
Q psy4596 257 QEITLIRQEGEKLGMHIKGGLRGQ-RGNPLDKNDEGVFITKINSGGAAKR-DGRLKVGMRLLEVNGMSLLGASHQEAVNT 334 (439)
Q Consensus 257 ~~v~l~~~~~~~lG~~i~~~~~~~-~g~~~~~~~~gi~I~~v~~~s~A~~-~G~L~~GD~Il~VNg~~v~~~~~~~~~~~ 334 (439)
.++.+.+....+|||+|.++.... .|. ....+++|..|.++|||++ +| |++||+|++|||+++.+++|.++.++
T Consensus 12 ~~v~l~~~~~~~lGf~l~~~~~~~~~g~---~~~~~~~V~~V~~~spA~~~ag-L~~GD~I~~ing~~v~~~~~~~~~~~ 87 (114)
T 1uew_A 12 SDVVIHRKENEGFGFVIISSLNRPESGS---TITVPHKIGRIIDGSPADRCAK-LKVGDRILAVNGQSIINMPHADIVKL 87 (114)
T ss_dssp EEEEEECCTTSCCCEEEECCCCSCCSSC---CSCCSCEEEEECTTCTTGGGSS-CCTTCBEEEETTBCTTTSCHHHHHHH
T ss_pred eEEEEEECCCCCCCEEEEeecccCCCCc---ccccCeEEEEECCCChHHHhCC-CCCCCEEEEECCEECCCCCHHHHHHH
Confidence 456666666788999998864321 111 1123679999999999999 88 99999999999999999999999999
Q ss_pred HhcCCCeEEEEEecCCc
Q psy4596 335 LRYSGHQISLTVCKGFE 351 (439)
Q Consensus 335 l~~~~~~v~l~v~r~~~ 351 (439)
|+..+..+.|+|.|...
T Consensus 88 l~~~g~~v~l~v~r~~~ 104 (114)
T 1uew_A 88 IKDAGLSVTLRIIPQEE 104 (114)
T ss_dssp HHHTTTEEEEEECCCSC
T ss_pred HHcCCCeEEEEEEeCCc
Confidence 99988999999998654
No 145
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=99.36 E-value=7.6e-12 Score=97.37 Aligned_cols=81 Identities=28% Similarity=0.431 Sum_probs=67.7
Q ss_pred eeeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhc
Q psy4596 258 EITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRY 337 (439)
Q Consensus 258 ~v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~ 337 (439)
.+.+.+. ..+|||++.++.. ..+++|..|.++|||+++| |++||+|++|||+++.++++.+++.+++.
T Consensus 6 ~v~l~r~-~~g~G~~~~~~~~----------~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~ 73 (91)
T 1g9o_A 6 LCCLEKG-PNGYGFHLHGEKG----------KLGQYIRLVEPGSPAEKAG-LLAGDRLVEVNGENVEKETHQQVVSRIRA 73 (91)
T ss_dssp EEEEECB-TTBCCEEEEECTT----------CSSEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHT
T ss_pred EEEEEeC-CCcccEEEEecCC----------CCCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 4444444 4579999987541 3489999999999999999 99999999999999999999999999999
Q ss_pred CCCeEEEEEecCC
Q psy4596 338 SGHQISLTVCKGF 350 (439)
Q Consensus 338 ~~~~v~l~v~r~~ 350 (439)
.+..+.+.+.++.
T Consensus 74 ~~~~~~~~~~~r~ 86 (91)
T 1g9o_A 74 ALNAVRLLVVDPE 86 (91)
T ss_dssp CSSEEEEEEECCC
T ss_pred CCCcEEEEEEcCC
Confidence 8777777776653
No 146
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=99.36 E-value=3.2e-12 Score=111.24 Aligned_cols=81 Identities=33% Similarity=0.577 Sum_probs=67.9
Q ss_pred CcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCeEEEE
Q psy4596 266 GEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRYSGHQISLT 345 (439)
Q Consensus 266 ~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l~ 345 (439)
..+|||+|.++..+ ........++||..|.++|||+++|+|++||+|++|||++|.+++|.+++.+|+.++..|.|+
T Consensus 90 ~~glG~~i~g~~~g---~~~~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~VNG~~v~~~~~~~~~~~l~~~g~~v~L~ 166 (170)
T 3egg_C 90 SEGLGISIIGMGAG---ADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLRNTKGRVRFM 166 (170)
T ss_dssp TTBSSEEEEEECSS---SSCCSSSBEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTBCHHHHHHHHHHCCSEEEEE
T ss_pred CCeEeEEEEecccC---CccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEE
Confidence 35799999882111 111112458999999999999999999999999999999999999999999999999999999
Q ss_pred EecC
Q psy4596 346 VCKG 349 (439)
Q Consensus 346 v~r~ 349 (439)
|.|.
T Consensus 167 V~R~ 170 (170)
T 3egg_C 167 IGRE 170 (170)
T ss_dssp EEEC
T ss_pred EEeC
Confidence 9874
No 147
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.36 E-value=6.9e-12 Score=98.01 Aligned_cols=84 Identities=36% Similarity=0.598 Sum_probs=70.6
Q ss_pred ceeeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHh
Q psy4596 257 QEITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLR 336 (439)
Q Consensus 257 ~~v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~ 336 (439)
+.+.+.+ ...+|||++.++.. ...+++|..|.++|||+++|.|++||+|++|||+++.++++.+++.+++
T Consensus 7 r~v~l~k-~~~glG~~l~~~~~---------~~~~~~V~~V~~~spA~~aGgl~~GD~I~~vng~~v~~~~~~~~~~~~~ 76 (93)
T 2dkr_A 7 GVVELPK-TDEGLGFNIMGGKE---------QNSPIYISRVIPGGVADRHGGLKRGDQLLSVNGVSVEGEQHEKAVELLK 76 (93)
T ss_dssp CEEEEEC-CTTCCCEEEECSSS---------SSCCCEEEEECTTSHHHHHCCCCTTCBEEEETTEECTTSCHHHHHHHHH
T ss_pred EEEEEEe-CCCCccEEEecccC---------CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 3455544 45789999987542 1358999999999999999559999999999999999999999999999
Q ss_pred cCCCeEEEEEecCC
Q psy4596 337 YSGHQISLTVCKGF 350 (439)
Q Consensus 337 ~~~~~v~l~v~r~~ 350 (439)
..+..+.|+|.|..
T Consensus 77 ~~~~~v~l~v~r~~ 90 (93)
T 2dkr_A 77 AAQGSVKLVVRSGP 90 (93)
T ss_dssp HCCSEEEEEECCCC
T ss_pred hCCCcEEEEEEeCC
Confidence 88889999998754
No 148
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=99.35 E-value=1.1e-12 Score=108.78 Aligned_cols=83 Identities=40% Similarity=0.600 Sum_probs=70.6
Q ss_pred ccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcC-----
Q psy4596 264 QEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRYS----- 338 (439)
Q Consensus 264 ~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~----- 338 (439)
....+|||+|.++..... ....++||..|.++|||+++|+|++||+|++|||+++.+++|.+++.+|+.+
T Consensus 34 ~~~~glG~~i~~~~~~~~-----~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~g 108 (127)
T 1wg6_A 34 SGSAGLGVSLKGNKSRET-----GTDLGIFIKSIIHGGAAFKDGRLRMNDQLIAVNGETLLGKSNHEAMETLRRSMSMEG 108 (127)
T ss_dssp STTTCCCCEEEEEEETTT-----TEEEEEEEEECCSSSSTHHHHTSCSCCBEEEETTEESTTSCHHHHHHHHHHHHHHHH
T ss_pred CCCCccCeEEecccCCCC-----CCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhhcccc
Confidence 567789999987642210 1124899999999999999999999999999999999999999999999976
Q ss_pred --CCeEEEEEecCCc
Q psy4596 339 --GHQISLTVCKGFE 351 (439)
Q Consensus 339 --~~~v~l~v~r~~~ 351 (439)
+..|.|+|.|...
T Consensus 109 ~~~~~v~l~v~R~~~ 123 (127)
T 1wg6_A 109 NIRGMIQLVILRRSG 123 (127)
T ss_dssp HHTCEEEEEEEECSC
T ss_pred CCCCEEEEEEEeCCC
Confidence 7899999998754
No 149
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=99.35 E-value=1.6e-12 Score=106.25 Aligned_cols=88 Identities=30% Similarity=0.525 Sum_probs=72.7
Q ss_pred eeeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcC-CCCHHHHHHHHh
Q psy4596 258 EITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLL-GASHQEAVNTLR 336 (439)
Q Consensus 258 ~v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~-~~~~~~~~~~l~ 336 (439)
.+.+.+....+|||++.++..... ...|++|..|.++|||+++|+|++||+|++|||+++. ++++.+++.+|+
T Consensus 23 ~v~l~k~~~~~lG~~i~~~~~~~~------~~~gv~V~~V~~~spA~~aG~l~~GD~Il~ing~~v~~~~~~~~~~~~l~ 96 (117)
T 2o2t_A 23 VFELLKPPSGGLGFSVVGLRSENR------GELGIFVQEIQEGSVAHRDGRLKETDQILAINGQALDQTITHQQAISILQ 96 (117)
T ss_dssp EEEEECCSSSCSSCCEEEEECCC--------CEEEEECCCCTTSHHHHHCCCCTTCEEEEETTEECCTTSCHHHHHHHHH
T ss_pred EEEEEECCCCCCCEEEeecccCCC------CCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCCHHHHHHHHH
Confidence 344444446789999987643211 1348999999999999999999999999999999998 999999999999
Q ss_pred cCCCeEEEEEecCCc
Q psy4596 337 YSGHQISLTVCKGFE 351 (439)
Q Consensus 337 ~~~~~v~l~v~r~~~ 351 (439)
..+..+.|+|.|...
T Consensus 97 ~~~~~v~l~v~R~~~ 111 (117)
T 2o2t_A 97 KAKDTVQLVIARGSL 111 (117)
T ss_dssp HCCSEEEEEEESSCC
T ss_pred cCCCEEEEEEEeCCc
Confidence 999999999998643
No 150
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=99.35 E-value=1.4e-12 Score=106.60 Aligned_cols=86 Identities=37% Similarity=0.564 Sum_probs=71.3
Q ss_pred eeeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhc
Q psy4596 258 EITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRY 337 (439)
Q Consensus 258 ~v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~ 337 (439)
++.+.+. ..+|||+++++..... ...+++|..|.++|||+++|+|++||+|++|||.++.++++.+++.+|+.
T Consensus 28 ~v~L~k~-~~glGf~l~~g~~~~~------~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 100 (117)
T 2fne_A 28 SITLERG-PDGLGFSIVGGYGSPH------GDLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILKR 100 (117)
T ss_dssp EEEECCB-TTBTSEEEEEEEEETT------EEEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHH
T ss_pred EEEEEeC-CCcccEEEecccCCCC------CCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 4444444 4679999988642111 12479999999999999999999999999999999999999999999998
Q ss_pred CCCeEEEEEecCC
Q psy4596 338 SGHQISLTVCKGF 350 (439)
Q Consensus 338 ~~~~v~l~v~r~~ 350 (439)
.+..+.|+|.|..
T Consensus 101 ~~~~v~l~v~R~g 113 (117)
T 2fne_A 101 TKGTVTLMVLSSD 113 (117)
T ss_dssp CCSSEEEEEEECS
T ss_pred CCCeEEEEEEeCC
Confidence 8888999999864
No 151
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=99.35 E-value=3.6e-12 Score=98.32 Aligned_cols=81 Identities=42% Similarity=0.602 Sum_probs=69.9
Q ss_pred eEEEEEecCC--CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhh-cCCCCCCCEEEEECCeeCCCCCHHHHHHHH
Q psy4596 160 LQDVVLPKSG--PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAAL-SGKLRMGDRILAVNGRDVSKVTHEEAVLAL 236 (439)
Q Consensus 160 ~~~v~l~~~~--~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~-~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l 236 (439)
++.|.|.+.. +|||++.++.+. ..+++|..|.++|||++ +| |++||+|++|||.++.+++|.+++..+
T Consensus 3 ~~~v~l~~~~~~~lG~~i~~~~~~--------~~~~~V~~V~~gspA~~~ag-l~~GD~I~~vng~~v~~~~~~~~~~~~ 73 (87)
T 4e34_A 3 IRKVLLLKEDHEGLGISITGGKEH--------GVPILISEIHPGQPADRCGG-LHVGDAILAVNGVNLRDTKHKEAVTIL 73 (87)
T ss_dssp CEEEEEECCTTBCCCEEEEEEGGG--------TEEEEEEEECTTSHHHHHSC-CCTTEEEEEETTEECTTCCHHHHHHHH
T ss_pred EEEEEEEECCCCcccEEEEccCCC--------CCCEEEEEECCCCHHHhcCC-CCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 4678888763 999999987542 23699999999999999 68 999999999999999999999999999
Q ss_pred hCCCCeEEEEEec
Q psy4596 237 LEPCPEILLKIQH 249 (439)
Q Consensus 237 ~~~~~~v~l~v~r 249 (439)
+..+..+.|+|.+
T Consensus 74 ~~~~~~v~l~v~~ 86 (87)
T 4e34_A 74 SQQRGEIEFEVVY 86 (87)
T ss_dssp HHCCSEEEEEEEE
T ss_pred HcCCCeEEEEEEE
Confidence 8888888888764
No 152
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=99.35 E-value=4.1e-12 Score=101.94 Aligned_cols=81 Identities=30% Similarity=0.516 Sum_probs=69.9
Q ss_pred ccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCeEE
Q psy4596 264 QEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRYSGHQIS 343 (439)
Q Consensus 264 ~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~ 343 (439)
+...+|||++.++.... ....+++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+++..+..+.
T Consensus 18 ~~~~glG~~i~~~~~~~------~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~ 91 (106)
T 3axa_A 18 KKQNGMGLSIVAAKGAG------QDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRTSSVVT 91 (106)
T ss_dssp ECSSSCSEEEEEEECSS------CSSEEEEEEEEBTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEE
T ss_pred CCCCccCEEEEeecCCC------CCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEE
Confidence 45678999998753211 124589999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCC
Q psy4596 344 LTVCKGF 350 (439)
Q Consensus 344 l~v~r~~ 350 (439)
|+|.|..
T Consensus 92 l~v~R~~ 98 (106)
T 3axa_A 92 LEVAKQG 98 (106)
T ss_dssp EEEECCC
T ss_pred EEEEeCC
Confidence 9999864
No 153
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=99.35 E-value=5.7e-12 Score=96.72 Aligned_cols=74 Identities=27% Similarity=0.525 Sum_probs=64.9
Q ss_pred CcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcC--CCeEE
Q psy4596 266 GEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRYS--GHQIS 343 (439)
Q Consensus 266 ~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~--~~~v~ 343 (439)
..+|||.+.++.. ...+++|..|.++|||+++|+|++||+|++|||+++.++++.++.++|+.. +..+.
T Consensus 10 ~~g~G~~i~~~~~---------~~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~ 80 (85)
T 2i04_A 10 SRGFGFTVVGGDE---------PDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVD 80 (85)
T ss_dssp TTBSSEEEEECCS---------TTBCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTSCTTCEEE
T ss_pred CCCCCEEEEcccC---------CCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEE
Confidence 4579999987532 234799999999999999999999999999999999999999999999986 78999
Q ss_pred EEEec
Q psy4596 344 LTVCK 348 (439)
Q Consensus 344 l~v~r 348 (439)
|+|.|
T Consensus 81 l~v~R 85 (85)
T 2i04_A 81 LELCR 85 (85)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 99865
No 154
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=99.35 E-value=4.9e-12 Score=100.88 Aligned_cols=82 Identities=30% Similarity=0.650 Sum_probs=69.9
Q ss_pred CcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCeEEEE
Q psy4596 266 GEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRYSGHQISLT 345 (439)
Q Consensus 266 ~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l~ 345 (439)
...|||++.++.. ..+.+......+++|..|.++|||++ | |++||+|++|||+++.++++.+++..++..+..+.|+
T Consensus 20 ~~~lG~~i~gg~~-~~~~p~~~~~~gv~V~~V~~~spA~~-g-L~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~ 96 (103)
T 1n7t_A 20 DPELGFSISGGVG-GRGNPFRPDDDGIFVTRVQPEGPASK-L-LQPGDKIIQANGYSFINIEHGQAVSLLKTFQNTVELI 96 (103)
T ss_dssp SSCCCBEEEECTT-SSBCSSCSSCCSEECCCBSSSSTTSS-S-CCTTCEEEEETTEECSSCCHHHHHHHHHHCCSEEEEE
T ss_pred CCCccEEEEcccC-CCCCccccCCCCEEEEEECCCCchHH-C-CCCCCEEEEECCEECCCCCHHHHHHHhhcCCCeEEEE
Confidence 4479999998643 22334444466999999999999999 8 9999999999999999999999999999889999999
Q ss_pred EecCC
Q psy4596 346 VCKGF 350 (439)
Q Consensus 346 v~r~~ 350 (439)
|.|..
T Consensus 97 v~R~~ 101 (103)
T 1n7t_A 97 IVREV 101 (103)
T ss_dssp EECCC
T ss_pred EEecC
Confidence 99863
No 155
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.35 E-value=8.7e-12 Score=99.82 Aligned_cols=83 Identities=36% Similarity=0.626 Sum_probs=70.1
Q ss_pred cCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCeEEE
Q psy4596 265 EGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRYSGHQISL 344 (439)
Q Consensus 265 ~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l 344 (439)
...+|||++.++.... +......+++|..|.++|||+++|.|++||+|++|||+++.++++.+++.+|+..+..+.|
T Consensus 16 ~~~glG~~l~~g~~~~---~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~~g~~v~l 92 (105)
T 1wha_A 16 SERGLGFSIAGGKGST---PYRAGDAGIFVSRIAEGGAAHRAGTLQVGDRVLSINGVDVTEARHDHAVSLLTAASPTIAL 92 (105)
T ss_dssp CTTCCSCEEECCTTSC---CSSTTCCSCEEEECCTTSSHHHHSSCCTTCEEEEESSCBCTTCCHHHHHHHHTSCCSCEEE
T ss_pred CCCccCEEEEeccCCC---cccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEE
Confidence 3456999999865321 1112245899999999999999999999999999999999999999999999988999999
Q ss_pred EEecCC
Q psy4596 345 TVCKGF 350 (439)
Q Consensus 345 ~v~r~~ 350 (439)
+|.|..
T Consensus 93 ~v~R~~ 98 (105)
T 1wha_A 93 LLEREA 98 (105)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 999874
No 156
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=99.35 E-value=5.8e-12 Score=100.09 Aligned_cols=90 Identities=28% Similarity=0.438 Sum_probs=72.0
Q ss_pred CCcceeeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHH
Q psy4596 254 EGFQEITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVN 333 (439)
Q Consensus 254 ~~~~~v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~ 333 (439)
..+.++.+.+..+..|||.+..... + ....+++|.+|.++|||+++|.|++||+|++|||+++.+.+++++++
T Consensus 8 ~~~~~v~l~k~~g~~lG~~i~~~~~---~----~~~~~~~V~~V~~~spA~~~ggl~~GD~I~~Ing~~v~~~~~~~~~~ 80 (101)
T 2yt7_A 8 DNCREVHLEKRRGEGLGVALVESGW---G----SLLPTAVIANLLHGGPAERSGALSIGDRLTAINGTSLVGLPLAACQA 80 (101)
T ss_dssp CCCEEEEEECCTTCCCCEEEEECCC---S----SSSCCEEEEEECTTSTTGGGSSCCTTCEEEEESSCBCTTSCHHHHHH
T ss_pred CceEEEEEEeCCCCccCEEEEeCCC---C----CCccCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 3445666666666789999974211 0 11236999999999999995559999999999999999999999999
Q ss_pred HHhc--CCCeEEEEEecCC
Q psy4596 334 TLRY--SGHQISLTVCKGF 350 (439)
Q Consensus 334 ~l~~--~~~~v~l~v~r~~ 350 (439)
+|+. .+..+.|+|.|..
T Consensus 81 ~l~~~~~g~~v~l~v~R~~ 99 (101)
T 2yt7_A 81 AVRETKSQTSVTLSIVHCP 99 (101)
T ss_dssp HHHHTTTSSEEEEEECCCC
T ss_pred HHHhCCCCCeEEEEEEeCC
Confidence 9998 6789999998753
No 157
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.35 E-value=4.8e-12 Score=100.90 Aligned_cols=86 Identities=31% Similarity=0.349 Sum_probs=73.0
Q ss_pred eEEEEEecCC-CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHhC
Q psy4596 160 LQDVVLPKSG-PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALLE 238 (439)
Q Consensus 160 ~~~v~l~~~~-~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~ 238 (439)
.+.|.+.+.. +|||+|.++.+.. .+.++|..|.+++||+++|+|++||+|++|||.++.+++|.+++..|+.
T Consensus 7 ~~~v~l~k~~~glG~~i~gg~~~~-------~~~~~I~~v~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 79 (103)
T 1ufx_A 7 GTLVRVKKSAATLGIAIEGGANTR-------QPLPRIVTIQRGGSAHNCGQLKVGHVILEVNGLTLRGKEHREAARIIAE 79 (103)
T ss_dssp SEEEEEECCSSSCCEEEECBTTSS-------CSSCEEEEECTTSHHHHHCSSCTTCBCCEETTEECTTCBHHHHHHHHHH
T ss_pred eEEEEEEcCCCcCCeEEECCCCCC-------CCcEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHH
Confidence 4677887766 9999999876632 2345999999999999999999999999999999999999999998875
Q ss_pred -----CCCeEEEEEecCCC
Q psy4596 239 -----PCPEILLKIQHDPH 252 (439)
Q Consensus 239 -----~~~~v~l~v~r~~~ 252 (439)
..+.+.|+|.|...
T Consensus 80 ~~~~~~~~~i~l~v~r~~~ 98 (103)
T 1ufx_A 80 AFKTKDRDYIDFLVTEFNS 98 (103)
T ss_dssp HHHCSSCSEEEEEECCCCC
T ss_pred hcccCCCCeEEEEEEEccc
Confidence 56788888888654
No 158
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=99.35 E-value=4.8e-12 Score=100.95 Aligned_cols=93 Identities=31% Similarity=0.488 Sum_probs=69.2
Q ss_pred eeeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhc
Q psy4596 258 EITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRY 337 (439)
Q Consensus 258 ~v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~ 337 (439)
++.+.+.....|||.+.+...............+++|..|.++|||+++|+|++||+|++|||+++.++++.++..+|+.
T Consensus 7 ~v~l~~~~~~~lG~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~ 86 (103)
T 2fcf_A 7 RVELWREPSKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRK 86 (103)
T ss_dssp EEEECCCC-CCCCEEEECCCC-------------EEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHT
T ss_pred EEEEEeCCCCceeEEEEccCCCCcccccCCCCCCEEEEEeCCCCcHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 45555555567999998754221111111223589999999999999999999999999999999999999999999999
Q ss_pred CCCeEEEEEecCC
Q psy4596 338 SGHQISLTVCKGF 350 (439)
Q Consensus 338 ~~~~v~l~v~r~~ 350 (439)
.++.+.|+|.|..
T Consensus 87 ~~~~v~l~v~r~~ 99 (103)
T 2fcf_A 87 AGNPVVFMVQSII 99 (103)
T ss_dssp CCSSEEEEEECCC
T ss_pred CCCcEEEEEEECC
Confidence 8889999998753
No 159
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.35 E-value=9.1e-12 Score=103.50 Aligned_cols=101 Identities=33% Similarity=0.498 Sum_probs=80.0
Q ss_pred CCCeEEEEEecCCCCCCcceeeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEE
Q psy4596 239 PCPEILLKIQHDPHPEGFQEITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEV 318 (439)
Q Consensus 239 ~~~~v~l~v~r~~~~~~~~~v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~V 318 (439)
++..+.++|.|++.. .++.+.......|||.+.++.. ...+++|..|.++|||+++| |++||+|++|
T Consensus 7 ~g~~v~l~v~R~g~~---~~v~v~~~~~~~lG~~~~~~~~---------~~~gv~V~~V~~~spA~~aG-L~~GD~I~~v 73 (128)
T 1uf1_A 7 GDRRSTLHLLQGGDE---KKVNLVLGDGRSLGLTIRGGAE---------YGLGIYITGVDPGSEAEGSG-LKVGDQILEV 73 (128)
T ss_dssp TTTSCCSCCCCCSSE---EEEEEECCSSCCCCEEEECCTT---------TTCCCEEEEECTTCHHHHHT-CCTTCEEEEE
T ss_pred CCCEEEEEEEeCCcE---EEEEEEECCCCccCEEEECccc---------CCCCEEEEEECCCCHHHHCC-CCCCCEEEEE
Confidence 456677788887754 4455544444679999977421 23489999999999999999 9999999999
Q ss_pred CCEEcCCCCHHHHHHHHhcCCCeEEEEEecCCccC
Q psy4596 319 NGMSLLGASHQEAVNTLRYSGHQISLTVCKGFERG 353 (439)
Q Consensus 319 Ng~~v~~~~~~~~~~~l~~~~~~v~l~v~r~~~~~ 353 (439)
||+++.++++.+++..++. +..+.|+|.|.....
T Consensus 74 ng~~v~~~~~~~~~~~~~~-~~~v~l~v~R~g~~~ 107 (128)
T 1uf1_A 74 NGRSFLNILHDEAVRLLKS-SRHLILTVKDVGRLP 107 (128)
T ss_dssp TTEECSSCCHHHHHHHHTT-CSEEEEEEECCSCCS
T ss_pred CCEECCCCCHHHHHHHHhc-CCeEEEEEEECCccc
Confidence 9999999999999998887 469999999875443
No 160
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=99.35 E-value=1.5e-12 Score=108.24 Aligned_cols=97 Identities=25% Similarity=0.368 Sum_probs=75.3
Q ss_pred CCcceeeeeecc-CcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHH
Q psy4596 254 EGFQEITLIRQE-GEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAV 332 (439)
Q Consensus 254 ~~~~~v~l~~~~-~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~ 332 (439)
..++.+.+.+.. ...|||++.++..............|++|..|.++|||+++|.|++||+|++|||+++.+++|.+++
T Consensus 28 ~~~r~v~l~k~~~~~~lG~~i~~~~~~~~~~~g~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~ 107 (128)
T 1nf3_C 28 ETHRRVRLCKYGTEKPLGFYIRDGSSVRVTPHGLEKVPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVT 107 (128)
T ss_dssp TTCEEEEECCSSTTSCCCEEEEEEEEEEEETTEEEEEEEEEEEEECTTCHHHHHTCCCTTCEEEEETTEESTTCCHHHHH
T ss_pred CccEEEEEEECCCCCCccEEEEccccccccccccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHH
Confidence 344556666554 5789999987642111000001123799999999999999998899999999999999999999999
Q ss_pred HHHhcCCCeEEEEEecCC
Q psy4596 333 NTLRYSGHQISLTVCKGF 350 (439)
Q Consensus 333 ~~l~~~~~~v~l~v~r~~ 350 (439)
.+|+..+..+.|+|.|..
T Consensus 108 ~~l~~~~~~v~l~v~r~~ 125 (128)
T 1nf3_C 108 DMMIANSRNLIITVRPAN 125 (128)
T ss_dssp HHHHHTTTSEEEEEECCC
T ss_pred HHHHcCCCeEEEEEEECC
Confidence 999998889999998864
No 161
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.35 E-value=9.6e-12 Score=101.14 Aligned_cols=94 Identities=28% Similarity=0.371 Sum_probs=76.5
Q ss_pred ceeEEEEEecCC--CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhh-cCCCCCCCEEEEECCeeCCCCCHHHHHH
Q psy4596 158 LFLQDVVLPKSG--PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAAL-SGKLRMGDRILAVNGRDVSKVTHEEAVL 234 (439)
Q Consensus 158 ~~~~~v~l~~~~--~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~-~G~L~~GD~Il~VNg~~v~~~~~~~~~~ 234 (439)
...++|.|.+.+ +|||+|.++.+....... ...+++|..|.++|||++ +| |++||+|++|||.++.++++.++..
T Consensus 9 ~~~~~v~l~~~~~~~lGf~l~~~~~~~~~g~~-~~~~~~V~~V~~~spA~~~ag-L~~GD~I~~ing~~v~~~~~~~~~~ 86 (114)
T 1uew_A 9 LQTSDVVIHRKENEGFGFVIISSLNRPESGST-ITVPHKIGRIIDGSPADRCAK-LKVGDRILAVNGQSIINMPHADIVK 86 (114)
T ss_dssp CCCEEEEEECCTTSCCCEEEECCCCSCCSSCC-SCCSCEEEEECTTCTTGGGSS-CCTTCBEEEETTBCTTTSCHHHHHH
T ss_pred ccceEEEEEECCCCCCCEEEEeecccCCCCcc-cccCeEEEEECCCChHHHhCC-CCCCCEEEEECCEECCCCCHHHHHH
Confidence 356788898854 899999987654321100 112679999999999999 99 9999999999999999988999999
Q ss_pred HHhCCCCeEEEEEecCCCC
Q psy4596 235 ALLEPCPEILLKIQHDPHP 253 (439)
Q Consensus 235 ~l~~~~~~v~l~v~r~~~~ 253 (439)
+++..+..+.|+|.|++..
T Consensus 87 ~l~~~g~~v~l~v~r~~~~ 105 (114)
T 1uew_A 87 LIKDAGLSVTLRIIPQEEL 105 (114)
T ss_dssp HHHHTTTEEEEEECCCSCC
T ss_pred HHHcCCCeEEEEEEeCCcC
Confidence 9988888999999997654
No 162
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=99.34 E-value=1.2e-11 Score=98.58 Aligned_cols=94 Identities=31% Similarity=0.439 Sum_probs=72.7
Q ss_pred eeEEEEEecCC--CccEEEeeCCCCCCCCCCC-CCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHH
Q psy4596 159 FLQDVVLPKSG--PLGFSIIGGTDHSCIPFGQ-HKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLA 235 (439)
Q Consensus 159 ~~~~v~l~~~~--~lG~~i~~~~~~~~~~~g~-~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~ 235 (439)
.++.+.+.+.. .|||++.+..+.....++. ...|++|..|.++|||+++|+|++||+|++|||.++.++++.++...
T Consensus 4 dp~~v~l~~~~~~~lG~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~ 83 (103)
T 2fcf_A 4 QPRRVELWREPSKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEA 83 (103)
T ss_dssp SCEEEEECCCC-CCCCEEEECCCC-------------EEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHH
T ss_pred CCEEEEEEeCCCCceeEEEEccCCCCcccccCCCCCCEEEEEeCCCCcHHHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 44678887754 8999999876543322222 12489999999999999999999999999999999998889999999
Q ss_pred HhCCCCeEEEEEecCCC
Q psy4596 236 LLEPCPEILLKIQHDPH 252 (439)
Q Consensus 236 l~~~~~~v~l~v~r~~~ 252 (439)
++..+..+.|+|.|...
T Consensus 84 l~~~~~~v~l~v~r~~~ 100 (103)
T 2fcf_A 84 IRKAGNPVVFMVQSIIS 100 (103)
T ss_dssp HHTCCSSEEEEEECCCC
T ss_pred HHhCCCcEEEEEEECCC
Confidence 98777799999998754
No 163
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=99.34 E-value=4.8e-12 Score=102.08 Aligned_cols=92 Identities=25% Similarity=0.449 Sum_probs=73.1
Q ss_pred eeeeeeccCcccceeecCCccCCC--CC-CCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHH
Q psy4596 258 EITLIRQEGEKLGMHIKGGLRGQR--GN-PLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNT 334 (439)
Q Consensus 258 ~v~l~~~~~~~lG~~i~~~~~~~~--g~-~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~ 334 (439)
.+.+.+....+|||++.++..... +. +......|++|..|.++|||+++| |++||+|++|||+++.+++|.+++.+
T Consensus 10 ~v~l~~~~~~g~G~~l~~~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~ 88 (109)
T 1q3o_A 10 TVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAG-LRMGDFLIEVNGQNVVKVGHRQVVNM 88 (109)
T ss_dssp EEEEECCTTSCCSEEEEESSCCCTTSCCCCCSSCCSSEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHH
T ss_pred EEEEEECCCCCCcEEEEeccCCCCcccccccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHH
Confidence 455555667889999987653110 00 111123489999999999999999 99999999999999999999999999
Q ss_pred HhcCCCeEEEEEecCC
Q psy4596 335 LRYSGHQISLTVCKGF 350 (439)
Q Consensus 335 l~~~~~~v~l~v~r~~ 350 (439)
|+..+..+.|+|.|..
T Consensus 89 l~~~~~~v~l~v~~~~ 104 (109)
T 1q3o_A 89 IRQGGNTLMVKVVMVT 104 (109)
T ss_dssp HHHTTTEEEEEEEEEE
T ss_pred HHhCCCEEEEEEEECC
Confidence 9988899999998753
No 164
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=99.34 E-value=1.2e-11 Score=99.27 Aligned_cols=94 Identities=31% Similarity=0.407 Sum_probs=75.7
Q ss_pred eeEEEEEecCC-CccEEEeeCCCCCCCC---CC-CCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHH
Q psy4596 159 FLQDVVLPKSG-PLGFSIIGGTDHSCIP---FG-QHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAV 233 (439)
Q Consensus 159 ~~~~v~l~~~~-~lG~~i~~~~~~~~~~---~g-~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~ 233 (439)
..+.|.|.|.. +|||++.++.+..... .+ ...++++|..|.++|||+++| |++||+|++|||.++.++++.++.
T Consensus 6 ~~r~v~l~k~~~g~G~~l~~~~~~~~~~~~~~~~~~~p~~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~ 84 (107)
T 3qe1_A 6 SPRVVRIVKSESGYGFNVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAG-VRKGDRILEVNGVNVEGATHKQVV 84 (107)
T ss_dssp CCEEEEEECBTTBTCEEEECCSSSCCCCEESSSSEESCCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHH
T ss_pred CcEEEEEEECCCCCCEEEEcccccCCcceeccccccCCceEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHH
Confidence 45778898876 9999998874422100 00 012356799999999999999 999999999999999999999999
Q ss_pred HHHhCCCCeEEEEEecCCCC
Q psy4596 234 LALLEPCPEILLKIQHDPHP 253 (439)
Q Consensus 234 ~~l~~~~~~v~l~v~r~~~~ 253 (439)
..++..+..+.|+|.|....
T Consensus 85 ~~l~~~g~~v~l~v~r~~~~ 104 (107)
T 3qe1_A 85 DLIRAGEKELILTVLSVESE 104 (107)
T ss_dssp HHHHHCSSEEEEEEECSSCC
T ss_pred HHHHcCCCEEEEEEEcCCCC
Confidence 99988889999999987643
No 165
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=99.34 E-value=2.9e-12 Score=102.98 Aligned_cols=84 Identities=23% Similarity=0.375 Sum_probs=70.8
Q ss_pred ceeeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcC-CCCCCCEEEEECCEEcCCCCHHHHHHHH
Q psy4596 257 QEITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDG-RLKVGMRLLEVNGMSLLGASHQEAVNTL 335 (439)
Q Consensus 257 ~~v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G-~L~~GD~Il~VNg~~v~~~~~~~~~~~l 335 (439)
..+.+.+.....|||.+.++.. ...+++|..|.++|||+++| +|++||+|++|||+++.+++|.+++.+|
T Consensus 19 ~~v~l~~~~~~~~G~~~~gg~~---------~~~~~~V~~V~~~spA~~aG~rL~~GD~Il~ing~~v~~~~~~~~~~~i 89 (107)
T 3nfk_A 19 VLIRMKPDENGRFGFNVKGGYD---------QKMPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFI 89 (107)
T ss_dssp EEEEECCCTTSCCCEEEEEEGG---------GTEEEEEEEECTTSHHHHSSSCCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred EEEEEEcCCCCCCCEEEEccCC---------CCCCeEEEEECCCCchHHcCCccCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 4455555556789999987642 12379999999999999999 6999999999999999999999999999
Q ss_pred hcCCC----eEEEEEecC
Q psy4596 336 RYSGH----QISLTVCKG 349 (439)
Q Consensus 336 ~~~~~----~v~l~v~r~ 349 (439)
+..+. .+.|+|.|.
T Consensus 90 ~~~~~~~~~~v~l~v~r~ 107 (107)
T 3nfk_A 90 KASCERHSGELMLLVRPN 107 (107)
T ss_dssp HCGGGSBTTBEEEEEECC
T ss_pred HhccccCCcEEEEEEEcC
Confidence 98765 999999873
No 166
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=99.34 E-value=3.8e-12 Score=98.87 Aligned_cols=82 Identities=35% Similarity=0.566 Sum_probs=68.6
Q ss_pred eeeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhc
Q psy4596 258 EITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRY 337 (439)
Q Consensus 258 ~v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~ 337 (439)
++.+.+. ..+|||++.++.. ...+++|..|.++|||+++|+|++||+|++|||.++.++++.+++.+|+.
T Consensus 5 ~v~l~~~-~~g~G~~~~~g~~---------~~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~ 74 (90)
T 2q9v_A 5 DIFLWRK-ETGFGFRILGGNE---------PGEPIYIGHIVPLGAADTDGRLRSGDELISVDGTPVIGKSHQLVVQLMQQ 74 (90)
T ss_dssp EEEEECB-TTBCCEEEEECSS---------TTSCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHH
T ss_pred EEEEEEC-CCccCEEEEcccc---------CCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 3444443 4679999987642 13479999999999999999999999999999999999999999999998
Q ss_pred CC--CeEEEEEecC
Q psy4596 338 SG--HQISLTVCKG 349 (439)
Q Consensus 338 ~~--~~v~l~v~r~ 349 (439)
.+ ..+.|+|.|.
T Consensus 75 ~~~~~~v~l~v~R~ 88 (90)
T 2q9v_A 75 AAKQGHVNLTVRQT 88 (90)
T ss_dssp HHHHTEEEEEEEEC
T ss_pred CCCCCeEEEEEEec
Confidence 64 4899999875
No 167
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=99.34 E-value=1.7e-11 Score=98.43 Aligned_cols=93 Identities=27% Similarity=0.372 Sum_probs=77.0
Q ss_pred CceeEEEEEecCC--CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHH
Q psy4596 157 SLFLQDVVLPKSG--PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVL 234 (439)
Q Consensus 157 ~~~~~~v~l~~~~--~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~ 234 (439)
.++.++|.|.|.. +|||++.++.+.... .....|++|..|.++|||+ +| |++||+|++|||.++.++++...+.
T Consensus 5 ~~~~~~v~l~k~~~~glG~~i~~~~~~~~~--~~~~~gv~V~~V~~~spA~-ag-l~~GD~I~~vng~~v~~~~~~~~~~ 80 (107)
T 2h2b_A 5 IWEQHTVTLHRAPGFGFGIAISGGRDNPHF--QSGETSIVISDVLKGGPAE-GQ-LQENDRVAMVNGVSMDNVEHAFAVQ 80 (107)
T ss_dssp CEEEEEEEEECBTTTBTCEEEEECTTSCCT--TTCCCCEEEEEECTTSTTB-TT-BCTTCEEEEETTEECTTCCHHHHHH
T ss_pred cceeEEEEEEeCCCCccCEEEecCcCCCcc--cCCCCCEEEEEECCCCchh-hC-CCCCCEEEEECCEECCCccHHHHHH
Confidence 3467889999873 999999987654321 1123589999999999999 99 9999999999999999999988887
Q ss_pred HHhCCCCeEEEEEecCCCC
Q psy4596 235 ALLEPCPEILLKIQHDPHP 253 (439)
Q Consensus 235 ~l~~~~~~v~l~v~r~~~~ 253 (439)
.+...+..+.|+|.|++..
T Consensus 81 ~~~~~g~~v~l~v~R~~~~ 99 (107)
T 2h2b_A 81 QLRKSGKNAKITIRRKKGG 99 (107)
T ss_dssp HHHTCCSEEEEEEEEESCC
T ss_pred HhhCCCCEEEEEEEECCCC
Confidence 7777889999999987654
No 168
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.34 E-value=7.2e-12 Score=100.12 Aligned_cols=89 Identities=25% Similarity=0.365 Sum_probs=75.7
Q ss_pred eeEEEEEecCC-CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHh
Q psy4596 159 FLQDVVLPKSG-PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALL 237 (439)
Q Consensus 159 ~~~~v~l~~~~-~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~ 237 (439)
..+.+.|.+.. +|||++.++.+.. ...+++|..|.++|||+++|+|++||+|++|||.++.++++.+++..++
T Consensus 11 ~~~~v~l~~~~~g~G~~l~~~~~~~------~~~~v~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~ 84 (104)
T 2djt_A 11 GHFSVELVRGYAGFGLTLGGGRDVA------GDTPLAVRGLLKDGPAQRCGRLEVGDLVLHINGESTQGLTHAQAVERIR 84 (104)
T ss_dssp CCEEEEEECCSSSCCEEEECCEETT------EECCCEEEEECTTCHHHHHCSCCTTCBEEEETTEECTTCCHHHHHHHHH
T ss_pred ceEEEEEEeCCCCccEEEEeccCCC------CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 55778888866 9999999865421 1247999999999999999999999999999999999999999998887
Q ss_pred CCCCeEEEEEecCCCC
Q psy4596 238 EPCPEILLKIQHDPHP 253 (439)
Q Consensus 238 ~~~~~v~l~v~r~~~~ 253 (439)
..+..+.|+|.|++..
T Consensus 85 ~~g~~v~l~v~R~g~~ 100 (104)
T 2djt_A 85 AGGPQLHLVIRRPLSG 100 (104)
T ss_dssp HTCSEEEEEECCCCCC
T ss_pred cCCCeEEEEEEECCCC
Confidence 7788999999987653
No 169
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=99.34 E-value=5.4e-12 Score=100.65 Aligned_cols=86 Identities=40% Similarity=0.532 Sum_probs=73.0
Q ss_pred eeEEEEEecCC--CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhc-CCCCCCCEEEEECCeeCCCCCHHHHHHH
Q psy4596 159 FLQDVVLPKSG--PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALS-GKLRMGDRILAVNGRDVSKVTHEEAVLA 235 (439)
Q Consensus 159 ~~~~v~l~~~~--~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~-G~L~~GD~Il~VNg~~v~~~~~~~~~~~ 235 (439)
..+.|.|.+.. +|||++.++.+. ..|++|..|.++|+|+++ | |++||+|++|||.++.++++.+++..
T Consensus 9 ~~~~v~l~~~~~~~lG~~l~~g~~~--------~~~~~V~~V~~~s~A~~a~g-L~~GD~Il~Ing~~v~~~~~~~~~~~ 79 (103)
T 2dc2_A 9 PIRKVLLLKEDHEGLGISITGGKEH--------GVPILISEIHPGQPADRCGG-LHVGDAILAVNGVNLRDTKHKEAVTI 79 (103)
T ss_dssp CEEEEEEECCSSSCCCEEEEEEGGG--------TEEEEEEEECTTSHHHHHTC-CCSSEEEEEETTEESTTSCHHHHHHH
T ss_pred CcEEEEEEeCCCCccCEEEEeccCC--------CCCEEEEEECCCCHHHHhCC-CCCCCEEEEECCEECCCCCHHHHHHH
Confidence 35677787754 999999987552 237999999999999996 8 99999999999999999999999999
Q ss_pred HhCCCCeEEEEEecCCCC
Q psy4596 236 LLEPCPEILLKIQHDPHP 253 (439)
Q Consensus 236 l~~~~~~v~l~v~r~~~~ 253 (439)
++..+..+.|+|.+....
T Consensus 80 l~~~~~~v~l~v~~~~~~ 97 (103)
T 2dc2_A 80 LSQQRGEIEFEVVYVALE 97 (103)
T ss_dssp HHHCCSEEEEEEEECC--
T ss_pred HHhCCCcEEEEEEecCCc
Confidence 998888999999987654
No 170
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.34 E-value=4.5e-12 Score=101.89 Aligned_cols=82 Identities=30% Similarity=0.612 Sum_probs=69.7
Q ss_pred ccCcccceeecC---CccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCC
Q psy4596 264 QEGEKLGMHIKG---GLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRYSGH 340 (439)
Q Consensus 264 ~~~~~lG~~i~~---~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~ 340 (439)
+...+|||++.+ +... .....++||..|.++|||+++|+|++||+|++|||+++.++++.+++.+++..+.
T Consensus 17 k~~~glG~~i~~~~~g~~~------~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~ 90 (107)
T 1wf8_A 17 KDEDGLGISIIGMGVGADA------GLEKLGIFVKTVTEGGAAQRDGRIQVNDQIVEVDGISLVGVTQNFAATVLRNTKG 90 (107)
T ss_dssp CBTTBSCEEEEEEEESCCT------TCCEEEEEEEEECTTCHHHHHCSSCTTCBEEEETTEECBSCCHHHHHHHHHHCCS
T ss_pred ECCCcccEEEEecCCCCCC------CCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCC
Confidence 335689999988 3211 1124589999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEecCCc
Q psy4596 341 QISLTVCKGFE 351 (439)
Q Consensus 341 ~v~l~v~r~~~ 351 (439)
.+.|+|.|...
T Consensus 91 ~v~l~v~R~~~ 101 (107)
T 1wf8_A 91 NVRFVIGREKP 101 (107)
T ss_dssp EEEEEEEEECC
T ss_pred eEEEEEEeCCC
Confidence 99999998643
No 171
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=99.34 E-value=5.4e-12 Score=101.19 Aligned_cols=82 Identities=32% Similarity=0.516 Sum_probs=70.9
Q ss_pred eeeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhc
Q psy4596 258 EITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRY 337 (439)
Q Consensus 258 ~v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~ 337 (439)
.+.+.+.....|||.+.... ...|++|..|.++|||+++| |++||+|++|||+++.+++|.+++.+|+.
T Consensus 4 ~v~l~~~~~~~~G~~l~~~~----------~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~ 72 (106)
T 3ngh_A 4 ESKLSKQEGQNYGFFLRIEK----------DTDGHLIRVIEEGSPAEKAG-LLDGDRVLRINGVFVDKEEHAQVVELVRK 72 (106)
T ss_dssp EEEEECCTTCCCCCEEECCT----------TCCSCEEECCCTTSHHHHTT-CCTTCEEEEETTEECTTSCHHHHHHHHHH
T ss_pred EEEEEeCCCCeeCEEEEEEe----------CCCCEEEEEeCCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 45556666678898887653 23489999999999999999 99999999999999999999999999998
Q ss_pred CCCeEEEEEecCC
Q psy4596 338 SGHQISLTVCKGF 350 (439)
Q Consensus 338 ~~~~v~l~v~r~~ 350 (439)
.+..+.|+|.|..
T Consensus 73 ~g~~v~l~v~r~~ 85 (106)
T 3ngh_A 73 SGNSVTLLVLDGD 85 (106)
T ss_dssp TTTEEEEEEECHH
T ss_pred CCCEEEEEEEECC
Confidence 8999999998764
No 172
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.34 E-value=7.7e-12 Score=101.01 Aligned_cols=86 Identities=36% Similarity=0.568 Sum_probs=71.9
Q ss_pred eeeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhc
Q psy4596 258 EITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRY 337 (439)
Q Consensus 258 ~v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~ 337 (439)
++.+.+. ..+|||++.++..... ...+++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+++.
T Consensus 11 ~v~l~~~-~~glG~~l~~g~~~~~------~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~ 83 (110)
T 1um1_A 11 TVELERG-PSGLGMGLIDGMHTHL------GAPGLYIQTLLPGSPAAADGRLSLGDRILEVNGSSLLGLGYLRAVDLIRH 83 (110)
T ss_dssp EEEEECC-TTCCCEEEEETTTSTT------CCSSEEEEEECTTSHHHHHSCCCTTCEEEEESSCBCSSCCHHHHHHHHHT
T ss_pred EEEEEEC-CCccCEEEeCCcCCCC------CCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 3344433 4679999987643211 24589999999999999999999999999999999999999999999999
Q ss_pred CCCeEEEEEecCC
Q psy4596 338 SGHQISLTVCKGF 350 (439)
Q Consensus 338 ~~~~v~l~v~r~~ 350 (439)
.+..+.|+|.|..
T Consensus 84 ~~~~v~l~v~R~~ 96 (110)
T 1um1_A 84 GGKKMRFLVAKSD 96 (110)
T ss_dssp CCSEEEEEEECCC
T ss_pred CCCeEEEEEEeCC
Confidence 9999999999864
No 173
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=99.34 E-value=8.6e-12 Score=103.97 Aligned_cols=90 Identities=30% Similarity=0.501 Sum_probs=74.0
Q ss_pred eeEEEEEecC----------C-CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCC
Q psy4596 159 FLQDVVLPKS----------G-PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKV 227 (439)
Q Consensus 159 ~~~~v~l~~~----------~-~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~ 227 (439)
....+.+.+. + .|||+|.++.+... ...|+||..|.++|+|+++|+|++||+|++|||+++.++
T Consensus 27 ~i~~v~l~~~~~~~~i~k~~~~~lG~~i~gg~~~~~-----~~~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~ 101 (131)
T 1wfg_A 27 LIGRILLNKRLKDGSVPRDSGAMLGLKVVGGKMTES-----GRLCAFITKVKKGSLADTVGHLRPGDEVLEWNGRLLQGA 101 (131)
T ss_dssp EEEEEEEECSCTTSCCCSCSCTTTTEEEEEEEECSS-----SCEEEEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTC
T ss_pred eeeEEEEeccceeEEEecCCCCCCCEEEecCccCCC-----CCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCC
Confidence 4555666654 3 89999998765321 234899999999999999999999999999999999999
Q ss_pred CHHHHHHHHhCC--CCeEEEEEecCCCC
Q psy4596 228 THEEAVLALLEP--CPEILLKIQHDPHP 253 (439)
Q Consensus 228 ~~~~~~~~l~~~--~~~v~l~v~r~~~~ 253 (439)
+|.+++.+++.. +..+.|+|.|++..
T Consensus 102 ~~~~~~~~l~~~~~g~~v~l~v~R~g~~ 129 (131)
T 1wfg_A 102 TFEEVYNIILESKPEPQVELVVSRSGPS 129 (131)
T ss_dssp CHHHHHHHHHHTSSSSEEEEEEEEECSC
T ss_pred CHHHHHHHHHhcCCCCEEEEEEEcCCCC
Confidence 999999988764 48899999987643
No 174
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=99.34 E-value=6.1e-12 Score=103.67 Aligned_cols=94 Identities=31% Similarity=0.489 Sum_probs=72.6
Q ss_pred ceeeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHh
Q psy4596 257 QEITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLR 336 (439)
Q Consensus 257 ~~v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~ 336 (439)
.++.+.+.....|||.+.++..............|++|..|.++|||+++|+|++||+|++|||+++.++++.+++++|+
T Consensus 26 ~~v~l~k~~~~~lGi~v~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 105 (123)
T 2iwq_A 26 RRVELWREPSKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIR 105 (123)
T ss_dssp EEEEECCCTTSCCSEEEEECC---------CCCCSEEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred EEEEEEecCCCCccEEEEeccCccccccccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 34555555567799999875422111111122458999999999999999999999999999999999999999999999
Q ss_pred cCCCeEEEEEecCC
Q psy4596 337 YSGHQISLTVCKGF 350 (439)
Q Consensus 337 ~~~~~v~l~v~r~~ 350 (439)
..+..+.|+|.|..
T Consensus 106 ~~~~~v~l~v~r~~ 119 (123)
T 2iwq_A 106 KAGNPVVFMVQSII 119 (123)
T ss_dssp HCCSSEEEEEECCC
T ss_pred cCCCeEEEEEEECC
Confidence 98889999998753
No 175
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.34 E-value=9e-12 Score=100.28 Aligned_cols=81 Identities=38% Similarity=0.685 Sum_probs=69.4
Q ss_pred cCcccceeec-----CCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCC
Q psy4596 265 EGEKLGMHIK-----GGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRYSG 339 (439)
Q Consensus 265 ~~~~lG~~i~-----~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~ 339 (439)
....|||++. ++..... ...+++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+++..+
T Consensus 18 ~~~~lG~~i~~~~~~gg~~~~~------~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~g 91 (108)
T 1q7x_A 18 NDNSLGISVTVLFDKGGVNTSV------RHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRNTG 91 (108)
T ss_dssp SSCSCCEEESSSSSSBCBCTTS------SSCCCBEEEECTTSTHHHHTCCCSSCEEEEETTEECBSCTTSHHHHHHHHTT
T ss_pred CCCCccEEEEEeccCCCccccC------CCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 3567999998 5432211 2458999999999999999999999999999999999999999999999999
Q ss_pred CeEEEEEecCCc
Q psy4596 340 HQISLTVCKGFE 351 (439)
Q Consensus 340 ~~v~l~v~r~~~ 351 (439)
..+.|+|.|...
T Consensus 92 ~~v~l~v~R~~~ 103 (108)
T 1q7x_A 92 QVVHLLLEKGQS 103 (108)
T ss_dssp SEEEEEEECCCC
T ss_pred CeEEEEEEeCCc
Confidence 999999998643
No 176
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=99.34 E-value=1.2e-11 Score=97.70 Aligned_cols=79 Identities=37% Similarity=0.544 Sum_probs=68.5
Q ss_pred cCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCeEEE
Q psy4596 265 EGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRYSGHQISL 344 (439)
Q Consensus 265 ~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l 344 (439)
...+|||++.++... ...+++|..|.++|||+++|+|++||+|++|||.++.++++.+++.+++..+..+.|
T Consensus 13 ~~~~lG~~l~~~~~~--------~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l 84 (98)
T 2opg_A 13 GRTGLGLSIVGGSDT--------LLGAIIIHEVYEEGAACKDGRLWAGDQILEVNGIDLRKATHDEAINVLRQTPQRVRL 84 (98)
T ss_dssp BTTBTCEEEEECTTS--------TTCSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEEE
T ss_pred CCCcccEEEecCCCC--------CCCCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEE
Confidence 356799999875421 114899999999999999999999999999999999999999999999988899999
Q ss_pred EEecCCc
Q psy4596 345 TVCKGFE 351 (439)
Q Consensus 345 ~v~r~~~ 351 (439)
+|.|...
T Consensus 85 ~v~R~~~ 91 (98)
T 2opg_A 85 TLYRDEA 91 (98)
T ss_dssp EEEECSS
T ss_pred EEEcCCC
Confidence 9988643
No 177
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=99.34 E-value=3e-12 Score=97.83 Aligned_cols=76 Identities=21% Similarity=0.407 Sum_probs=65.7
Q ss_pred eeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcC
Q psy4596 259 ITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRYS 338 (439)
Q Consensus 259 v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~ 338 (439)
+.+.+. ..+|||.+.++ .+++|..|.++|||+++| |++||+|++|||+++.+++|.+++.+++..
T Consensus 6 v~l~~~-~~g~G~~~~~~-------------~~~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 70 (83)
T 2kv8_A 6 VEVARG-RAGYGFTLSGQ-------------APCVLSCVMRGSPADFVG-LRAGDQILAVNEINVKKASHEDVVKLIGKC 70 (83)
T ss_dssp EEECCC-SSCCSCBCCCS-------------SSCBCCBCCTTSTTTTTT-CCTTCEEEEETTEECSSCCHHHHHHHHTTC
T ss_pred EEEEeC-CCcccEEEEcC-------------CCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 444433 46789988653 279999999999999999 999999999999999999999999999988
Q ss_pred CCeEEEEEecC
Q psy4596 339 GHQISLTVCKG 349 (439)
Q Consensus 339 ~~~v~l~v~r~ 349 (439)
+..+.|+|.|.
T Consensus 71 ~~~v~l~v~R~ 81 (83)
T 2kv8_A 71 SGVLHMVIAEG 81 (83)
T ss_dssp SSCEEEEEECC
T ss_pred CCeEEEEEEcC
Confidence 88899999885
No 178
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=99.33 E-value=3.6e-12 Score=99.23 Aligned_cols=81 Identities=27% Similarity=0.467 Sum_probs=66.6
Q ss_pred eeeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhc
Q psy4596 258 EITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRY 337 (439)
Q Consensus 258 ~v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~ 337 (439)
.+.+.+. ..+|||++.+.. ...+++|..|.++|||+++| |++||+|++|||+++.++++.++.++|+.
T Consensus 6 ~v~l~k~-~~~~G~~l~~~~----------~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~ 73 (91)
T 2vsp_A 6 LCRLAKG-ENGYGFHLNAIR----------GLPGSFIKEVQKGGPADLAG-LEDEDVIIEVNGVNVLDEPYEKVVDRIQS 73 (91)
T ss_dssp EEEEECB-TTBTSCCCBCCT----------TCSCCBC-CCCTTSHHHHTT-CCTTCEEEEETTEECTTSCHHHHHHHHTT
T ss_pred EEEEEeC-CCcccEEEEecc----------CCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 3444444 447999997643 13478999999999999999 99999999999999999999999999998
Q ss_pred CCCeEEEEEecCC
Q psy4596 338 SGHQISLTVCKGF 350 (439)
Q Consensus 338 ~~~~v~l~v~r~~ 350 (439)
.+..+.|+|.|..
T Consensus 74 ~g~~v~l~v~r~~ 86 (91)
T 2vsp_A 74 SGKNVTLLVCGKK 86 (91)
T ss_dssp SCSEEEEEEEC--
T ss_pred CCCEEEEEEEeCC
Confidence 8899999999864
No 179
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=99.33 E-value=7.9e-12 Score=96.62 Aligned_cols=82 Identities=26% Similarity=0.312 Sum_probs=69.9
Q ss_pred eEEEEEecCC--CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhh-cCCCCCCCEEEEECCeeCCCCCHHHHHHHH
Q psy4596 160 LQDVVLPKSG--PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAAL-SGKLRMGDRILAVNGRDVSKVTHEEAVLAL 236 (439)
Q Consensus 160 ~~~v~l~~~~--~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~-~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l 236 (439)
.+.|.|.|.. +|||++.... ..+++|..|.++|||++ +| |++||+|++|||.++.+++|.++...+
T Consensus 2 ~r~V~l~K~~~~~lG~~i~~~~----------~~~~~I~~V~~gspA~~~ag-L~~GD~I~~Ing~~v~~~~~~~~~~~l 70 (88)
T 1kwa_A 2 SRLVQFQKNTDEPMGITLKMNE----------LNHCIVARIMHGGMIHRQGT-LHVGDEIREINGISVANQTVEQLQKML 70 (88)
T ss_dssp CEEEEEEECSSSCCCEEEECSC----------GGGEEEEEECTTSHHHHHTC-CCTTCEEEEETTEEGGGSCHHHHHHHH
T ss_pred eEEEEEEeCCCCceeEEEEeCC----------CCCEEEEEECCCCHHHHcCC-CCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 3678888873 9999998732 12699999999999999 77 999999999999999999999999999
Q ss_pred hCCCCeEEEEEecCCC
Q psy4596 237 LEPCPEILLKIQHDPH 252 (439)
Q Consensus 237 ~~~~~~v~l~v~r~~~ 252 (439)
+.....+.|+|.|...
T Consensus 71 ~~~~~~v~l~v~r~~~ 86 (88)
T 1kwa_A 71 REMRGSITFKIVPSYR 86 (88)
T ss_dssp HHCCEEEEEEEECCCC
T ss_pred hcCCCcEEEEEECCcC
Confidence 8665588999988653
No 180
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=99.33 E-value=1.1e-11 Score=97.50 Aligned_cols=85 Identities=22% Similarity=0.312 Sum_probs=72.3
Q ss_pred CceeEEEEEecC-C-CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHH
Q psy4596 157 SLFLQDVVLPKS-G-PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVL 234 (439)
Q Consensus 157 ~~~~~~v~l~~~-~-~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~ 234 (439)
.+...++.|.+. . +|||.+... ..|++|..|.++|||+++|+|++||+|++|||.++.++++.++..
T Consensus 6 ~~~~~~v~l~~~~~~glG~~~~~~-----------~~gv~V~~V~~~spA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~ 74 (96)
T 2qkv_A 6 SLEKFNVDLMKKAGKELGLSLSPN-----------EIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVSYA 74 (96)
T ss_dssp CCCCEEEEEECBTTBCCCEEEEEC-----------SSSEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHH
T ss_pred HCceEEEEEEeCCCCCccEEEEeC-----------CCcEEEEEeCCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 345677888653 3 899998762 237999999999999999999999999999999999999999998
Q ss_pred HHhCCCCeEEEEEecCCC
Q psy4596 235 ALLEPCPEILLKIQHDPH 252 (439)
Q Consensus 235 ~l~~~~~~v~l~v~r~~~ 252 (439)
.++..++.+.|+|.|...
T Consensus 75 ~~~~~~~~v~l~v~R~~p 92 (96)
T 2qkv_A 75 LFKGANGKVSMEVTRPKP 92 (96)
T ss_dssp HHHTCSSEEEEEEECCCC
T ss_pred HHhcCCCcEEEEEEeCCc
Confidence 888888889999998643
No 181
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=99.33 E-value=3.9e-12 Score=105.74 Aligned_cols=90 Identities=24% Similarity=0.464 Sum_probs=77.8
Q ss_pred eeEEEEEecCC--CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCC-CCCHHHHHHH
Q psy4596 159 FLQDVVLPKSG--PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVS-KVTHEEAVLA 235 (439)
Q Consensus 159 ~~~~v~l~~~~--~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~-~~~~~~~~~~ 235 (439)
..+.|.|.+.. +|||+|.++.+... ...|++|..|.++|+|+++|+|++||+|++|||.++. ++++.+++..
T Consensus 25 ~~~~v~l~k~~~~~lG~~i~g~~~~~~-----~~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~~ 99 (128)
T 2db5_A 25 QIEYIDIERPSTGGLGFSVVALRSQNL-----GKVDIFVKDVQPGSVADRDQRLKENDQILAINHTPLDQNISHQQAIAL 99 (128)
T ss_dssp EEEEEEEECCSSSCCCCEEEEEECSSS-----SCEEEEEECCCTTSHHHHTCCCCSSCBEEEESSCBCSTTSCHHHHHHH
T ss_pred ceEEEEEEECCCCccCEEEecccCCCC-----CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCCHHHHHHH
Confidence 56788888874 89999988765321 2348999999999999999999999999999999997 9999999999
Q ss_pred HhCCCCeEEEEEecCCCC
Q psy4596 236 LLEPCPEILLKIQHDPHP 253 (439)
Q Consensus 236 l~~~~~~v~l~v~r~~~~ 253 (439)
++..+..+.|+|.|++..
T Consensus 100 l~~~~~~v~l~v~r~~~~ 117 (128)
T 2db5_A 100 LQQTTGSLRLIVAREPVH 117 (128)
T ss_dssp HHHCCSEEEEEEEECCCS
T ss_pred HHcCCCeEEEEEEcCCCC
Confidence 988889999999998643
No 182
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=99.33 E-value=1.2e-11 Score=97.28 Aligned_cols=90 Identities=24% Similarity=0.264 Sum_probs=70.7
Q ss_pred eeEEEEEecCC--CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHH
Q psy4596 159 FLQDVVLPKSG--PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLAL 236 (439)
Q Consensus 159 ~~~~v~l~~~~--~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l 236 (439)
..+.|.|.|.. +|||+|.+........ .....+++|..|.++|||+++| |++||+|++|||.++.++++.++...+
T Consensus 4 ~~r~v~l~k~~~~~~Gf~l~~~g~~~~~~-~~~~~~~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l 81 (96)
T 2ego_A 4 QRKVLTLEKGDNQTFGFEIQTYGLHHREE-QRVEMVTFVARVHESSPAQLAG-LTPGDTIASVNGLNVEGIRHREIVDII 81 (96)
T ss_dssp CEEEEEEECCTTCCCSEEEEEEEC--------CCEEEEEEEECTTCHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred ccEEEEEEeCCCCCccEEEEeccccccCC-CCCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 45788998865 9999999721100000 0012379999999999999999 999999999999999998899999988
Q ss_pred hCCCCeEEEEEecC
Q psy4596 237 LEPCPEILLKIQHD 250 (439)
Q Consensus 237 ~~~~~~v~l~v~r~ 250 (439)
+..+..+.|+|.+.
T Consensus 82 ~~~~~~v~l~v~~~ 95 (96)
T 2ego_A 82 KASGNVLRLETLYG 95 (96)
T ss_dssp HHTTTEEEEEEECC
T ss_pred HhCCCeEEEEEEEC
Confidence 87777899988764
No 183
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=99.33 E-value=1.6e-11 Score=95.90 Aligned_cols=81 Identities=27% Similarity=0.472 Sum_probs=70.0
Q ss_pred eeEEEEEecCC-CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHh
Q psy4596 159 FLQDVVLPKSG-PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALL 237 (439)
Q Consensus 159 ~~~~v~l~~~~-~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~ 237 (439)
..+.|.|.+.. +|||.+.+. .+++|..|.++|||+++| |++||+|++|||+++.++++.+++..++
T Consensus 8 ~~r~v~l~~~~~~~G~~l~~~------------~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~ 74 (93)
T 2dls_A 8 VQRCVIIQKDQHGFGFTVSGD------------RIVLVQSVRPGGAAMKAG-VKEGDRIIKVNGTMVTNSSHLEVVKLIK 74 (93)
T ss_dssp CEEEEEEECSSSSCCEEEECS------------SSCEEEEECSSSTTTTTT-CCSSCEEEEETTEECSSSCHHHHHHHHT
T ss_pred CCEEEEEEeCCCceeEEEeCC------------CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHhhc
Confidence 45778888877 999998752 369999999999999999 9999999999999999999988777665
Q ss_pred CCCCeEEEEEecCCCC
Q psy4596 238 EPCPEILLKIQHDPHP 253 (439)
Q Consensus 238 ~~~~~v~l~v~r~~~~ 253 (439)
.+..+.|+|.|++..
T Consensus 75 -~g~~v~l~v~R~~~~ 89 (93)
T 2dls_A 75 -SGAYVALTLLGSSSG 89 (93)
T ss_dssp -SSSEEEEEEECCCCC
T ss_pred -CCCEEEEEEEECCCC
Confidence 689999999997643
No 184
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.33 E-value=1.6e-11 Score=97.33 Aligned_cols=86 Identities=33% Similarity=0.516 Sum_probs=73.0
Q ss_pred eeEEEEEecCC--CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHH
Q psy4596 159 FLQDVVLPKSG--PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLAL 236 (439)
Q Consensus 159 ~~~~v~l~~~~--~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l 236 (439)
..++|.|.+.. .|||++....+. ..|++|..|.++|||+++| |++||+|++|||.++.++++.+++..+
T Consensus 10 ~~~~v~l~~~~~~~lG~~~~~~~~~--------~~gv~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~ 80 (100)
T 2eeh_A 10 IIHSVRVEKSPAGRLGFSVRGGSEH--------GLGIFVSKVEEGSSAERAG-LCVGDKITEVNGLSLESTTMGSAVKVL 80 (100)
T ss_dssp EECCEEECCCSSSSCSEEEECCTTT--------TCCEEEEEECTTSHHHHHT-CCSSCEEEEETTEECSSCCHHHHHHHH
T ss_pred eEEEEEEEECCCCCccEEEEccccC--------CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHhh
Confidence 45668888765 699999986541 2479999999999999999 999999999999999998888888877
Q ss_pred hCCCCeEEEEEecCCCCC
Q psy4596 237 LEPCPEILLKIQHDPHPE 254 (439)
Q Consensus 237 ~~~~~~v~l~v~r~~~~~ 254 (439)
+. +..+.|+|.|++...
T Consensus 81 ~~-~~~v~l~v~R~g~~p 97 (100)
T 2eeh_A 81 TS-SSRLHMMVRRMGSGP 97 (100)
T ss_dssp HS-CSSEEEEEEECSCCC
T ss_pred cC-CCEEEEEEEECCcCC
Confidence 76 788999999987653
No 185
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=99.33 E-value=1e-11 Score=99.45 Aligned_cols=83 Identities=19% Similarity=0.268 Sum_probs=71.4
Q ss_pred eeEEEEEecCC--CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHH
Q psy4596 159 FLQDVVLPKSG--PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLAL 236 (439)
Q Consensus 159 ~~~~v~l~~~~--~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l 236 (439)
+..+|.|.+.. +|||++.+. ..|++|..|.++|||+++|+|++||+|++|||+++.++++.++...+
T Consensus 2 ~~~~v~L~k~~~~glG~~i~~~-----------~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~ 70 (106)
T 2la8_A 2 EKFNVDLMKKAGKELGLSLSPN-----------EIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALF 70 (106)
T ss_dssp EEEEEEECCBSSSTTCCEEEEC-----------SSSEEEEECCTTSCHHHHTTCCTTCEEEEESSCBCSSSCHHHHHHHH
T ss_pred eEEEEEEEeCCCCccCEEEEeC-----------CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 45678887543 899998761 24799999999999999999999999999999999999999999888
Q ss_pred hCCCCeEEEEEecCCC
Q psy4596 237 LEPCPEILLKIQHDPH 252 (439)
Q Consensus 237 ~~~~~~v~l~v~r~~~ 252 (439)
+..++.+.|+|.|...
T Consensus 71 ~~~~~~v~l~v~R~~~ 86 (106)
T 2la8_A 71 KGANGKVSMEVTRPKP 86 (106)
T ss_dssp HSCBSCEEEEEEECCS
T ss_pred hCCCCeEEEEEEeCCC
Confidence 8888889999998643
No 186
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=99.32 E-value=1.5e-11 Score=101.73 Aligned_cols=85 Identities=29% Similarity=0.404 Sum_probs=74.5
Q ss_pred eeEEEEEecCC--CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHH
Q psy4596 159 FLQDVVLPKSG--PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLAL 236 (439)
Q Consensus 159 ~~~~v~l~~~~--~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l 236 (439)
..+++.+.+.. +|||++.++.+. ..+++|..|.++|||+++|+|++||+|++|||.++.+++|.++...+
T Consensus 19 ~~~~v~l~k~~~~~lG~~i~gg~~~--------~~~~~V~~v~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l 90 (125)
T 3hpk_A 19 VPGKVTLQKDAQNLIGISIGGGAQY--------CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMI 90 (125)
T ss_dssp EEEEEEEECCTTSCCCEEEEECSSC--------CSSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CCeEEEEEeCCCCCcCEEEeccCCC--------CCCEEEEEeCCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 46778888854 899999987652 24799999999999999999999999999999999999999999999
Q ss_pred hCCCCeEEEEEecCC
Q psy4596 237 LEPCPEILLKIQHDP 251 (439)
Q Consensus 237 ~~~~~~v~l~v~r~~ 251 (439)
+..+..+.|+|.|..
T Consensus 91 ~~~~~~v~l~v~r~~ 105 (125)
T 3hpk_A 91 QEVKGEVTIHYNKLQ 105 (125)
T ss_dssp HHSCSEEEEEEEEEC
T ss_pred HcCCCeEEEEEEECC
Confidence 888788999998854
No 187
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.32 E-value=3.3e-12 Score=104.73 Aligned_cols=85 Identities=21% Similarity=0.338 Sum_probs=71.3
Q ss_pred ceeeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhc--CCCCCCCEEEEECCEEcCCCCHHHHHHH
Q psy4596 257 QEITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRD--GRLKVGMRLLEVNGMSLLGASHQEAVNT 334 (439)
Q Consensus 257 ~~v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~--G~L~~GD~Il~VNg~~v~~~~~~~~~~~ 334 (439)
..+.+.+.....|||++.++.. ...+++|..|.++|||+++ | |++||+|++|||+++.+++|.+++.+
T Consensus 17 ~~v~l~k~~~~~~G~~l~gg~~---------~~~~v~V~~V~~~spA~~a~gG-L~~GD~Il~ing~~v~~~~~~~~~~~ 86 (119)
T 2cs5_A 17 VLIRMKPDENGRFGFNVKGGYD---------QKMPVIVSRVAPGTPADLCVPR-LNEGDQVVLINGRDIAEHTHDQVVLF 86 (119)
T ss_dssp EEEEECCCSSSCCSEEEEEEGG---------GTEEEEEEEECSSSTTTSSSSC-CCTTCEEEEETTBCTTSSCHHHHHHH
T ss_pred EEEEEEeCCCCCcCEEEecccC---------CCCCeEEEEECCCCHHHHhhcC-CCCCCEEEEECCEECCCCCHHHHHHH
Confidence 3455566666779999987642 1237999999999999999 7 99999999999999999999999999
Q ss_pred HhcCC----CeEEEEEecCCc
Q psy4596 335 LRYSG----HQISLTVCKGFE 351 (439)
Q Consensus 335 l~~~~----~~v~l~v~r~~~ 351 (439)
++..+ ..+.|+|.|...
T Consensus 87 ~~~~~~~~~~~v~l~v~R~~~ 107 (119)
T 2cs5_A 87 IKASCERHSGELMLLVRPNAV 107 (119)
T ss_dssp HHHHHHCCSSCEEEEEECCCC
T ss_pred HHhccccCCCEEEEEEEcccc
Confidence 99864 589999998743
No 188
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.32 E-value=1.6e-11 Score=102.08 Aligned_cols=95 Identities=25% Similarity=0.461 Sum_probs=79.4
Q ss_pred CCceeEEEEEecC-C-CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHH
Q psy4596 156 SSLFLQDVVLPKS-G-PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAV 233 (439)
Q Consensus 156 ~~~~~~~v~l~~~-~-~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~ 233 (439)
..++...|.|.+. . +|||++.++.+... ++ ...|++|..|.++|||+++|+|++||+|++|||.++.++++.++.
T Consensus 12 ~~~~~~~v~l~~~~~~~lG~~i~~~~~~~~--~~-~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~ 88 (129)
T 2dmz_A 12 SLFETYNVELVRKDGQSLGIRIVGYVGTSH--TG-EASGIYVKSVIPGSAAYHNGHIQVNDKIVAVDGVNIQGFANHDVV 88 (129)
T ss_dssp CCEEEEEEEECCCTTCCCCEEEEEECCCSS--SC-CCCEEEEEEECTTSHHHHHTCCCSSCBEEEETTBCCTTCCHHHHH
T ss_pred CCCcEEEEEEEeCCCCCcCEEEEeecCCcc--cC-CCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHH
Confidence 3457788899663 3 99999998765432 11 235899999999999999999999999999999999998899999
Q ss_pred HHHhCCCCeEEEEEecCCCC
Q psy4596 234 LALLEPCPEILLKIQHDPHP 253 (439)
Q Consensus 234 ~~l~~~~~~v~l~v~r~~~~ 253 (439)
..++..+..+.|+|.|++..
T Consensus 89 ~~l~~~~~~v~l~v~R~~~~ 108 (129)
T 2dmz_A 89 EVLRNAGQVVHLTLVRRKTS 108 (129)
T ss_dssp HHHHHCCSSEEEEEEEESSS
T ss_pred HHHHcCCCeEEEEEEeCCcc
Confidence 98888888999999998754
No 189
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=99.32 E-value=1.6e-11 Score=96.00 Aligned_cols=73 Identities=30% Similarity=0.559 Sum_probs=64.4
Q ss_pred eccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCeE
Q psy4596 263 RQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRYSGHQI 342 (439)
Q Consensus 263 ~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v 342 (439)
.+....|||.+.+. .+++|..|.++|||+++| |++||+|++|||+++.++++.+++..++ .+..+
T Consensus 15 ~~~~~~~G~~l~~~-------------~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~-~g~~v 79 (93)
T 2dls_A 15 QKDQHGFGFTVSGD-------------RIVLVQSVRPGGAAMKAG-VKEGDRIIKVNGTMVTNSSHLEVVKLIK-SGAYV 79 (93)
T ss_dssp ECSSSSCCEEEECS-------------SSCEEEEECSSSTTTTTT-CCSSCEEEEETTEECSSSCHHHHHHHHT-SSSEE
T ss_pred EeCCCceeEEEeCC-------------CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHhhc-CCCEE
Confidence 34456799998753 379999999999999999 9999999999999999999999999887 58999
Q ss_pred EEEEecCC
Q psy4596 343 SLTVCKGF 350 (439)
Q Consensus 343 ~l~v~r~~ 350 (439)
.|+|.|..
T Consensus 80 ~l~v~R~~ 87 (93)
T 2dls_A 80 ALTLLGSS 87 (93)
T ss_dssp EEEEECCC
T ss_pred EEEEEECC
Confidence 99999864
No 190
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=99.32 E-value=8.9e-12 Score=98.19 Aligned_cols=82 Identities=37% Similarity=0.675 Sum_probs=69.5
Q ss_pred cCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCeEEE
Q psy4596 265 EGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRYSGHQISL 344 (439)
Q Consensus 265 ~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l 344 (439)
...+|||++.++.... .....+++|..|.++|||+++|+|++||+|++|||+++.++++.++..+|+..+..+.|
T Consensus 12 ~~~~lG~~i~~~~~~~-----~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l 86 (97)
T 2jil_A 12 EGNTFGFVIRGGAHDD-----RNKSRPVVITSVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQCGQEAAL 86 (97)
T ss_dssp BTTBCSEEEEEECCSC-----C--CEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHHSCSEEEE
T ss_pred CCCccCEEEeCcccCC-----CCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEE
Confidence 4578999998764221 01235899999999999999999999999999999999999999999999998899999
Q ss_pred EEecCCc
Q psy4596 345 TVCKGFE 351 (439)
Q Consensus 345 ~v~r~~~ 351 (439)
+|.|...
T Consensus 87 ~v~R~~~ 93 (97)
T 2jil_A 87 LIEYDVS 93 (97)
T ss_dssp EEEEECC
T ss_pred EEEeCCC
Confidence 9998643
No 191
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=99.32 E-value=1e-11 Score=100.67 Aligned_cols=82 Identities=23% Similarity=0.585 Sum_probs=70.0
Q ss_pred eeeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhc
Q psy4596 258 EITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRY 337 (439)
Q Consensus 258 ~v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~ 337 (439)
++.+.+. ..+|||++.++.. ...+++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+++.
T Consensus 27 ~v~l~~~-~~glG~~l~~~~~---------~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 96 (112)
T 2r4h_A 27 TVELERG-AKGFGFSLRGGRE---------YNMDLYVLRLAEDGPAERSGKMRIGDEILEINGETTKNMKHSRAIELIKN 96 (112)
T ss_dssp EEEEECB-TTBTSEEEEECGG---------GTCCEEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHT
T ss_pred EEEEEcC-CCccCEEEecccc---------CCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 4444433 4579999987642 13489999999999999999999999999999999999999999999998
Q ss_pred CCCeEEEEEecC
Q psy4596 338 SGHQISLTVCKG 349 (439)
Q Consensus 338 ~~~~v~l~v~r~ 349 (439)
.+..+.|+|.|.
T Consensus 97 ~g~~v~l~v~R~ 108 (112)
T 2r4h_A 97 GGRRVRLFLKRG 108 (112)
T ss_dssp TTTEEEEEEECC
T ss_pred CCCeEEEEEEeC
Confidence 889999999875
No 192
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=99.32 E-value=4.9e-12 Score=104.88 Aligned_cols=91 Identities=32% Similarity=0.480 Sum_probs=73.8
Q ss_pred eeEEEEEec-CC-CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHH
Q psy4596 159 FLQDVVLPK-SG-PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLAL 236 (439)
Q Consensus 159 ~~~~v~l~~-~~-~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l 236 (439)
...+|.|.+ .. +|||+|.++.+... ....+++|..|.++|||+++|+|++||+|++|||.++.+++|.+++..|
T Consensus 25 ~~~~v~l~k~~~~glG~~i~~~~~~~~----~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l 100 (127)
T 1wg6_A 25 LTLEIPLNDSGSAGLGVSLKGNKSRET----GTDLGIFIKSIIHGGAAFKDGRLRMNDQLIAVNGETLLGKSNHEAMETL 100 (127)
T ss_dssp EEEEEECSSSTTTCCCCEEEEEEETTT----TEEEEEEEEECCSSSSTHHHHTSCSCCBEEEETTEESTTSCHHHHHHHH
T ss_pred eEEEEEEeeCCCCccCeEEecccCCCC----CCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 345566663 33 99999998764310 0123799999999999999999999999999999999999999999988
Q ss_pred hCC-------CCeEEEEEecCCCC
Q psy4596 237 LEP-------CPEILLKIQHDPHP 253 (439)
Q Consensus 237 ~~~-------~~~v~l~v~r~~~~ 253 (439)
+.. +..+.|+|.|+..+
T Consensus 101 ~~~~~~~g~~~~~v~l~v~R~~~~ 124 (127)
T 1wg6_A 101 RRSMSMEGNIRGMIQLVILRRSGP 124 (127)
T ss_dssp HHHHHHHHHHTCEEEEEEEECSCS
T ss_pred HHhhccccCCCCEEEEEEEeCCCC
Confidence 864 78999999997654
No 193
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=99.32 E-value=1e-11 Score=97.55 Aligned_cols=81 Identities=25% Similarity=0.409 Sum_probs=69.6
Q ss_pred eEEEEEecCC--CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHh
Q psy4596 160 LQDVVLPKSG--PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALL 237 (439)
Q Consensus 160 ~~~v~l~~~~--~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~ 237 (439)
.+.|.|.|.. .|||++....+ .|++|..|.++|||+++|+|++||+|++|||.++.++++.++...++
T Consensus 13 ~~~v~l~K~~~~~lG~~l~~~~~----------~gv~V~~V~~gspA~~aG~L~~GD~Il~ING~~v~~~~~~~~~~~l~ 82 (97)
T 2ejy_A 13 VRLIQFEKVTEEPMGICLKLNEK----------QSCTVARILHGGMIHRQGSLHVGDEILEINGTNVTNHSVDQLQKAMK 82 (97)
T ss_dssp CEEEEEEECSSSCCSEEEEECTT----------CCEEEEEECSSSHHHHHTCCCTTCEEEEETTBCCCSSCSHHHHHHHH
T ss_pred cEEEEEEeCCCCCeeEEEEeCCC----------CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 4678887743 99999986322 37999999999999999999999999999999999888999999998
Q ss_pred CCCCeEEEEEecC
Q psy4596 238 EPCPEILLKIQHD 250 (439)
Q Consensus 238 ~~~~~v~l~v~r~ 250 (439)
..+..+.|+|.+.
T Consensus 83 ~~~~~v~L~V~~~ 95 (97)
T 2ejy_A 83 ETKGMISLKVIPN 95 (97)
T ss_dssp HCCEEEEEEEECC
T ss_pred cCCCeEEEEEEEC
Confidence 7777888888764
No 194
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=99.32 E-value=1.4e-11 Score=102.47 Aligned_cols=86 Identities=29% Similarity=0.378 Sum_probs=74.2
Q ss_pred eeEEEEEecCC-CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHh
Q psy4596 159 FLQDVVLPKSG-PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALL 237 (439)
Q Consensus 159 ~~~~v~l~~~~-~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~ 237 (439)
...+|.|.+.. +|||++.++.+. ..+++|..|.++|+|+++|+|++||+|++|||.++.+++|.+++..++
T Consensus 18 ~~~~v~l~~~~~g~G~~i~g~~~~--------~~~v~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~ 89 (129)
T 2kpk_A 18 KFIHTKLRKSSRGFGFTVVGGDEP--------DEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQ 89 (129)
T ss_dssp EEEEEEEEECSSCCSEEEEEEEET--------TEEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTSCHHHHHHHHH
T ss_pred cEEEEEEEECCCcccEEEeCccCC--------CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 55677888876 999999986431 347999999999999999999999999999999999999999999888
Q ss_pred CC--CCeEEEEEecCCC
Q psy4596 238 EP--CPEILLKIQHDPH 252 (439)
Q Consensus 238 ~~--~~~v~l~v~r~~~ 252 (439)
.. +..+.|+|.|+..
T Consensus 90 ~~~~g~~v~l~v~R~~~ 106 (129)
T 2kpk_A 90 SIPIGASVDLELCRGYP 106 (129)
T ss_dssp HSCTTEEEEEEEEECSC
T ss_pred hCCCCCeEEEEEEeCCC
Confidence 65 6789999998753
No 195
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.31 E-value=3.8e-12 Score=102.09 Aligned_cols=86 Identities=27% Similarity=0.463 Sum_probs=74.1
Q ss_pred eeEEEEEecCC-CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHh
Q psy4596 159 FLQDVVLPKSG-PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALL 237 (439)
Q Consensus 159 ~~~~v~l~~~~-~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~ 237 (439)
..+.|.|.|.+ +|||.+.+... ..|++|..|.++|||+++| |++||+|++|||.++.++++.++...++
T Consensus 8 ~~r~v~l~k~~~~~G~~l~~~~~---------~~g~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~~~ 77 (106)
T 2eei_A 8 QPRLCYLVKEGGSYGFSLKTVQG---------KKGVYMTDITPQGVAMRAG-VLADDHLIEVNGENVEDASHEEVVEKVK 77 (106)
T ss_dssp SSEEEEEECCSSSCSCCEECCSS---------CCSCEECCCCTTSHHHHHT-CCSSEEEEEETTEECTTCCHHHHHHHHH
T ss_pred CCEEEEEEECCCCCCEEEEeccC---------CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 45778898876 99999986532 3479999999999999999 9999999999999999999999998887
Q ss_pred CCCCeEEEEEecCCCCC
Q psy4596 238 EPCPEILLKIQHDPHPE 254 (439)
Q Consensus 238 ~~~~~v~l~v~r~~~~~ 254 (439)
..+..+.|++.|.....
T Consensus 78 ~~~~~v~l~v~r~~~~~ 94 (106)
T 2eei_A 78 KSGSRVMFLLVDKETDK 94 (106)
T ss_dssp HHCSEEEEEECCTTTSC
T ss_pred hCCCeEEEEEEcCchhh
Confidence 77888999999876553
No 196
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=99.31 E-value=4.5e-12 Score=103.61 Aligned_cols=90 Identities=33% Similarity=0.544 Sum_probs=77.5
Q ss_pred eeEEEEEecC--CCccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCC-CCCHHHHHHH
Q psy4596 159 FLQDVVLPKS--GPLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVS-KVTHEEAVLA 235 (439)
Q Consensus 159 ~~~~v~l~~~--~~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~-~~~~~~~~~~ 235 (439)
..+.|.|.+. ++|||++.++.+... ...|++|..|.++|||+++|+|++||+|++|||.++. ++++.++...
T Consensus 20 ~~~~v~l~k~~~~~lG~~i~~~~~~~~-----~~~gv~V~~V~~~spA~~aG~l~~GD~Il~ing~~v~~~~~~~~~~~~ 94 (117)
T 2o2t_A 20 HVEVFELLKPPSGGLGFSVVGLRSENR-----GELGIFVQEIQEGSVAHRDGRLKETDQILAINGQALDQTITHQQAISI 94 (117)
T ss_dssp CEEEEEEECCSSSCSSCCEEEEECCC-------CEEEEECCCCTTSHHHHHCCCCTTCEEEEETTEECCTTSCHHHHHHH
T ss_pred eEEEEEEEECCCCCCCEEEeecccCCC-----CCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCCHHHHHHH
Confidence 5688999886 389999998754211 1348999999999999999999999999999999998 9999999999
Q ss_pred HhCCCCeEEEEEecCCCC
Q psy4596 236 LLEPCPEILLKIQHDPHP 253 (439)
Q Consensus 236 l~~~~~~v~l~v~r~~~~ 253 (439)
++..+..+.|+|.|++..
T Consensus 95 l~~~~~~v~l~v~R~~~~ 112 (117)
T 2o2t_A 95 LQKAKDTVQLVIARGSLP 112 (117)
T ss_dssp HHHCCSEEEEEEESSCCG
T ss_pred HHcCCCEEEEEEEeCCcc
Confidence 888889999999998754
No 197
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.31 E-value=9.6e-12 Score=102.75 Aligned_cols=78 Identities=29% Similarity=0.532 Sum_probs=68.8
Q ss_pred CcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCeEEEE
Q psy4596 266 GEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRYSGHQISLT 345 (439)
Q Consensus 266 ~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l~ 345 (439)
...|||++.++... ...+++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+++..+..+.|+
T Consensus 35 ~~glG~~l~~~~~~--------~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~~~~~v~l~ 106 (124)
T 2daz_A 35 KNGLGLSLAGNKDR--------SRMSIFVVGINPEGPAAADGRMRIGDELLEINNQILYGRSHQNASAIIKTAPSKVKLV 106 (124)
T ss_dssp SSCCCEEEECBSST--------TSCCEEEEEECTTSHHHHHTCCCTTCEECEESSCBCTTSCHHHHHHHHHHSCSEEEEE
T ss_pred CCccCEEEeccCCC--------CcCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEE
Confidence 46799999876421 1348999999999999999999999999999999999999999999999988999999
Q ss_pred EecCCc
Q psy4596 346 VCKGFE 351 (439)
Q Consensus 346 v~r~~~ 351 (439)
|.|...
T Consensus 107 v~R~~~ 112 (124)
T 2daz_A 107 FIRNED 112 (124)
T ss_dssp EEECTT
T ss_pred EEeCCC
Confidence 998643
No 198
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=99.31 E-value=3.4e-12 Score=97.57 Aligned_cols=80 Identities=29% Similarity=0.427 Sum_probs=69.5
Q ss_pred eeEEEEEecCC-CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHh
Q psy4596 159 FLQDVVLPKSG-PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALL 237 (439)
Q Consensus 159 ~~~~v~l~~~~-~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~ 237 (439)
.++.|.|.+.. +|||++.+. .|++|..|.++|||+++| |++||+|++|||.++.++++.++...++
T Consensus 2 ~~r~v~l~~~~~g~G~~~~~~------------~~~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~ 68 (83)
T 2kv8_A 2 RVRSVEVARGRAGYGFTLSGQ------------APCVLSCVMRGSPADFVG-LRAGDQILAVNEINVKKASHEDVVKLIG 68 (83)
T ss_dssp CEEEEEECCCSSCCSCBCCCS------------SSCBCCBCCTTSTTTTTT-CCTTCEEEEETTEECSSCCHHHHHHHHT
T ss_pred CcEEEEEEeCCCcccEEEEcC------------CCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 35778898876 899887652 268999999999999999 9999999999999999999999998888
Q ss_pred CCCCeEEEEEecCC
Q psy4596 238 EPCPEILLKIQHDP 251 (439)
Q Consensus 238 ~~~~~v~l~v~r~~ 251 (439)
..+..+.|+|.|+.
T Consensus 69 ~~~~~v~l~v~R~~ 82 (83)
T 2kv8_A 69 KCSGVLHMVIAEGV 82 (83)
T ss_dssp TCSSCEEEEEECCC
T ss_pred hCCCeEEEEEEcCC
Confidence 77778999998864
No 199
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.31 E-value=1.7e-11 Score=97.17 Aligned_cols=84 Identities=29% Similarity=0.533 Sum_probs=71.3
Q ss_pred ceeeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHh
Q psy4596 257 QEITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLR 336 (439)
Q Consensus 257 ~~v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~ 336 (439)
.++.+.+.....|||.+.+... ...+++|..|.++|||+++| |++||+|++|||+++.++++.+++..++
T Consensus 12 ~~v~l~~~~~~~lG~~~~~~~~---------~~~gv~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~ 81 (100)
T 2eeh_A 12 HSVRVEKSPAGRLGFSVRGGSE---------HGLGIFVSKVEEGSSAERAG-LCVGDKITEVNGLSLESTTMGSAVKVLT 81 (100)
T ss_dssp CCEEECCCSSSSCSEEEECCTT---------TTCCEEEEEECTTSHHHHHT-CCSSCEEEEETTEECSSCCHHHHHHHHH
T ss_pred EEEEEEECCCCCccEEEEcccc---------CCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHhhc
Confidence 4456666666679999987532 13489999999999999999 9999999999999999999999999998
Q ss_pred cCCCeEEEEEecCCc
Q psy4596 337 YSGHQISLTVCKGFE 351 (439)
Q Consensus 337 ~~~~~v~l~v~r~~~ 351 (439)
. +..+.|+|.|...
T Consensus 82 ~-~~~v~l~v~R~g~ 95 (100)
T 2eeh_A 82 S-SSRLHMMVRRMGS 95 (100)
T ss_dssp S-CSSEEEEEEECSC
T ss_pred C-CCEEEEEEEECCc
Confidence 8 7999999998754
No 200
>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.31 E-value=5.1e-12 Score=102.25 Aligned_cols=94 Identities=33% Similarity=0.492 Sum_probs=76.9
Q ss_pred eEEEEEecC--CCccEEEeeCCCCCC-CCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHH
Q psy4596 160 LQDVVLPKS--GPLGFSIIGGTDHSC-IPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLAL 236 (439)
Q Consensus 160 ~~~v~l~~~--~~lG~~i~~~~~~~~-~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l 236 (439)
.++|.|.+. .+|||+|.++.+... .++.....|++|..|.++|+|+++|+|++||+|++|||+++.++++.+++..+
T Consensus 10 ~~~v~l~k~~~~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l 89 (111)
T 1uju_A 10 LRELCIQKAPGERLGISIRGGARGHAGNPRDPTDEGIFISKVSPTGAAGRDGRLRVGLRLLEVNQQSLLGLTHGEAVQLL 89 (111)
T ss_dssp SSCEEEECCTTCCCCEEEECCSSSSCSCSSCTTCCCCEEEEECTTSHHHHHSSCCTTCBCCBBSSCBCTTSCHHHHHHHH
T ss_pred cEEEEEEECCCCccCEEEECCccccccccccCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 345777775 399999998875321 11222345899999999999999999999999999999999999999999999
Q ss_pred hCCCCeEEEEEecCCCC
Q psy4596 237 LEPCPEILLKIQHDPHP 253 (439)
Q Consensus 237 ~~~~~~v~l~v~r~~~~ 253 (439)
+..+..+.|+|.|+...
T Consensus 90 ~~~g~~v~l~v~r~~~~ 106 (111)
T 1uju_A 90 RSVGDTLTVLVCDGFES 106 (111)
T ss_dssp SSCSSEEEECCCCCCCC
T ss_pred HcCCCeEEEEEEECCCC
Confidence 88888999999887544
No 201
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=99.31 E-value=8.1e-12 Score=97.21 Aligned_cols=76 Identities=21% Similarity=0.344 Sum_probs=67.2
Q ss_pred cCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCeEEE
Q psy4596 265 EGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRYSGHQISL 344 (439)
Q Consensus 265 ~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l 344 (439)
....|||++.++.. ...+++|..|.++|||+++| |++||+|++|||+++.++++.++..+++..+..+.|
T Consensus 11 ~~~~~G~~l~~~~~---------~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l 80 (91)
T 2pkt_A 11 GPGPWGFRLVGGKD---------FEQPLAISRVTPGSKAALAN-LCIGDVITAIDGENTSNMTHLEAQNRIKGCTDNLTL 80 (91)
T ss_dssp SSSCCSEEEEEEGG---------GTEEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEEE
T ss_pred CCCCCCEEEEccCC---------CCCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEE
Confidence 35679999987642 12479999999999999999 999999999999999999999999999998899999
Q ss_pred EEecCC
Q psy4596 345 TVCKGF 350 (439)
Q Consensus 345 ~v~r~~ 350 (439)
+|.|..
T Consensus 81 ~v~R~g 86 (91)
T 2pkt_A 81 TVARSE 86 (91)
T ss_dssp EEEEEC
T ss_pred EEEECC
Confidence 999864
No 202
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=99.31 E-value=1.3e-11 Score=97.01 Aligned_cols=85 Identities=27% Similarity=0.417 Sum_probs=70.3
Q ss_pred eeeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhc
Q psy4596 258 EITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRY 337 (439)
Q Consensus 258 ~v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~ 337 (439)
.+.+.+. ..+|||++.+... .+...+++|..|.++|||+++| |++||+|++|||+++.++++.++..+|+.
T Consensus 6 ~v~l~k~-~~~~G~~l~~~~~-------~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~ 76 (96)
T 2v90_A 6 CLHLEKG-PQGFGFLLREEKG-------LDGRPGQFLWEVDPGLPAKKAG-MQAGDRLVAVAGESVEGLGHEETVSRIQG 76 (96)
T ss_dssp EEEEECB-TTBSCEEEEEEEC-------TTSCEEEEEEEECTTSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHT
T ss_pred EEEEEeC-CCcccEEEEeccC-------CCCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 4444444 4589999976321 0123489999999999999999 99999999999999999999999999999
Q ss_pred CCCeEEEEEecCCc
Q psy4596 338 SGHQISLTVCKGFE 351 (439)
Q Consensus 338 ~~~~v~l~v~r~~~ 351 (439)
.+..+.|+|.|...
T Consensus 77 ~g~~v~l~v~r~~~ 90 (96)
T 2v90_A 77 QGSCVSLTVVDPEA 90 (96)
T ss_dssp TTTEEEEEEECCCT
T ss_pred CCCEEEEEEECCCC
Confidence 88999999998754
No 203
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=99.31 E-value=1.6e-11 Score=98.70 Aligned_cols=84 Identities=23% Similarity=0.489 Sum_probs=71.1
Q ss_pred eccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCeE
Q psy4596 263 RQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRYSGHQI 342 (439)
Q Consensus 263 ~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v 342 (439)
.....+|||++.++..... .....+++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+|+..+..+
T Consensus 21 ~~~~~~lG~~~~~~~~~~~----~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g~~v 96 (108)
T 2jre_A 21 EKDTSSLGISISGMRDQST----TGEATGIYVKSLIPGSAAALDGRIEPNDKILRVDDVNVQGMAQSDVVEVLRNAGNPV 96 (108)
T ss_dssp CSTTSCCSEEEECCCCCSC----SSCCCCCEEEEECTTSHHHHHSSCCSSEEEEEETTEECTTSCHHHHHHHHHHHCSEE
T ss_pred cCCCCCcCEEEEcccCCCC----CCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence 4567789999987643211 112458999999999999999999999999999999999999999999999888999
Q ss_pred EEEEecCC
Q psy4596 343 SLTVCKGF 350 (439)
Q Consensus 343 ~l~v~r~~ 350 (439)
.|+|.|..
T Consensus 97 ~l~v~R~~ 104 (108)
T 2jre_A 97 RLLLIRRL 104 (108)
T ss_dssp EEEEEECC
T ss_pred EEEEEeCC
Confidence 99998864
No 204
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=99.31 E-value=2e-11 Score=100.60 Aligned_cols=94 Identities=31% Similarity=0.440 Sum_probs=73.9
Q ss_pred eeEEEEEecC--CCccEEEeeCCCCCCCCCCC-CCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHH
Q psy4596 159 FLQDVVLPKS--GPLGFSIIGGTDHSCIPFGQ-HKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLA 235 (439)
Q Consensus 159 ~~~~v~l~~~--~~lG~~i~~~~~~~~~~~g~-~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~ 235 (439)
..+.+.+.+. ++|||++.++.+.....++. ...|++|..|.++|||+++|+|++||+|++|||.++.++++.++...
T Consensus 24 ~p~~v~l~k~~~~~lGi~v~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~ 103 (123)
T 2iwq_A 24 QPRRVELWREPSKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEA 103 (123)
T ss_dssp CCEEEEECCCTTSCCSEEEEECC---------CCCCSEEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHH
T ss_pred CCEEEEEEecCCCCccEEEEeccCccccccccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 4467888775 38999999876533322221 23489999999999999999999999999999999998889999999
Q ss_pred HhCCCCeEEEEEecCCC
Q psy4596 236 LLEPCPEILLKIQHDPH 252 (439)
Q Consensus 236 l~~~~~~v~l~v~r~~~ 252 (439)
++..+..+.|+|.|.+.
T Consensus 104 l~~~~~~v~l~v~r~~~ 120 (123)
T 2iwq_A 104 IRKAGNPVVFMVQSIIS 120 (123)
T ss_dssp HHHCCSSEEEEEECCCC
T ss_pred HHcCCCeEEEEEEECCc
Confidence 98777799999998764
No 205
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=99.31 E-value=1.2e-11 Score=99.39 Aligned_cols=73 Identities=18% Similarity=0.261 Sum_probs=63.7
Q ss_pred cCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCC-eEE
Q psy4596 265 EGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRYSGH-QIS 343 (439)
Q Consensus 265 ~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~-~v~ 343 (439)
....|||.+.+.. +++|..|.++|||+++| |++||+|++|||.++.++++.+++++|+..++ .+.
T Consensus 32 ~~~~~G~~l~~~~-------------~v~V~~V~~gspA~~AG-L~~GD~Il~VnG~~v~~~~~~dv~~~i~~~~~~~v~ 97 (109)
T 2vsv_A 32 EEGDLGFTLRGNA-------------PVQVHFLDPYCSASVAG-AREGDYIVSIQLVDCKWLTLSEVMKLLKSFGEDEIE 97 (109)
T ss_dssp GGGCCCEEEESSS-------------SCEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTTTTSCEE
T ss_pred CCCceeEEEeCCC-------------CeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCeEE
Confidence 3577899886532 68999999999999999 99999999999999999999999999998766 499
Q ss_pred EEEecCCc
Q psy4596 344 LTVCKGFE 351 (439)
Q Consensus 344 l~v~r~~~ 351 (439)
|+|.|..+
T Consensus 98 l~V~~~~~ 105 (109)
T 2vsv_A 98 MKVVSLLD 105 (109)
T ss_dssp EEEESCC-
T ss_pred EEEEECCC
Confidence 99988654
No 206
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.31 E-value=4.8e-12 Score=100.97 Aligned_cols=86 Identities=27% Similarity=0.401 Sum_probs=73.9
Q ss_pred eeEEEEEecCCCccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHhC
Q psy4596 159 FLQDVVLPKSGPLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALLE 238 (439)
Q Consensus 159 ~~~~v~l~~~~~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~ 238 (439)
+..+|.|....+|||++.++.+. ..+++|..|.++|||+++| |++||+|++|||.++.++++.++...++.
T Consensus 5 ~~~~v~l~~~~~~G~~l~gg~~~--------~~~v~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~ 75 (103)
T 1wf7_A 5 SSGSVSLVGPAPWGFRLQGGKDF--------NMPLTISSLKDGGKASQAH-VRIGDVVLSIDGISAQGMTHLEAQNKIKA 75 (103)
T ss_dssp CCEEEEEESSSCCSCCEEEETTT--------TEEEEECCCCTTCHHHHTT-CCTTCBEEEETTEECSSCCHHHHHHHHHH
T ss_pred CEEEEEEeCCCccCEEEeccccC--------CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 34677777666999999987652 2368999999999999999 99999999999999999999999888877
Q ss_pred CCCeEEEEEecCCCC
Q psy4596 239 PCPEILLKIQHDPHP 253 (439)
Q Consensus 239 ~~~~v~l~v~r~~~~ 253 (439)
.+..+.|+|.|++..
T Consensus 76 ~g~~v~l~v~R~g~~ 90 (103)
T 1wf7_A 76 CTGSLNMTLQRASAA 90 (103)
T ss_dssp CSSEEEEEECCCSCC
T ss_pred CCCeEEEEEEeCCCc
Confidence 788999999998754
No 207
>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=99.31 E-value=1.7e-11 Score=100.54 Aligned_cols=88 Identities=27% Similarity=0.528 Sum_probs=72.5
Q ss_pred eeEEEEEecCC--CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHH
Q psy4596 159 FLQDVVLPKSG--PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLAL 236 (439)
Q Consensus 159 ~~~~v~l~~~~--~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l 236 (439)
..+.+.+.+.. +|||++.++.+.. ..|++|..|.++|||+++|+|++||+|++|||.++.+++|.+++..+
T Consensus 15 ~~~~v~l~~~~~~~lG~~i~g~~~~~-------~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l 87 (119)
T 1x6d_A 15 GIHVTILHKEEGAGLGFSLAGGADLE-------NKVITVHRVFPNGLASQEGTIQKGNEVLSINGKSLKGTTHHDALAIL 87 (119)
T ss_dssp TEEEEEEECCTTSCCSEEEECCSSSS-------CSSCEEEEECSSSHHHHHTSSCTTCBCCEETTEECSSCCHHHHHHHH
T ss_pred CeEEEEEEeCCCCccCEEEeCCCCCC-------CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 45667777753 9999999876531 34799999999999999999999999999999999999999999888
Q ss_pred hCCC-CeEEEEEecCCCC
Q psy4596 237 LEPC-PEILLKIQHDPHP 253 (439)
Q Consensus 237 ~~~~-~~v~l~v~r~~~~ 253 (439)
+..+ ..+.+++.|++..
T Consensus 88 ~~~~~~~~~l~v~R~~~~ 105 (119)
T 1x6d_A 88 RQAREPRQAVIVTRKLTP 105 (119)
T ss_dssp HHTTSSSEEEEEEECCCS
T ss_pred HhCCCCeEEEEEEcCCCc
Confidence 7654 4455788887654
No 208
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=99.31 E-value=1.6e-11 Score=98.68 Aligned_cols=92 Identities=25% Similarity=0.420 Sum_probs=70.6
Q ss_pred eeeeeeccCcccceeecCCccCCCCC---CCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHH
Q psy4596 258 EITLIRQEGEKLGMHIKGGLRGQRGN---PLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNT 334 (439)
Q Consensus 258 ~v~l~~~~~~~lG~~i~~~~~~~~g~---~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~ 334 (439)
.+.+.+. ..+|||++.++....... ....+..++||..|.++|||+++| |++||+|++|||+++.++++.+++.+
T Consensus 9 ~v~l~k~-~~g~G~~l~~~~~~~~~~~~~~~~~~~p~~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~ 86 (107)
T 3qe1_A 9 VVRIVKS-ESGYGFNVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAG-VRKGDRILEVNGVNVEGATHKQVVDL 86 (107)
T ss_dssp EEEEECB-TTBTCEEEECCSSSCCCCEESSSSEESCCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHH
T ss_pred EEEEEEC-CCCCCEEEEcccccCCcceeccccccCCceEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHH
Confidence 3444444 447999998863211100 001112356799999999999999 99999999999999999999999999
Q ss_pred HhcCCCeEEEEEecCCc
Q psy4596 335 LRYSGHQISLTVCKGFE 351 (439)
Q Consensus 335 l~~~~~~v~l~v~r~~~ 351 (439)
|++.+..+.|+|.|...
T Consensus 87 l~~~g~~v~l~v~r~~~ 103 (107)
T 3qe1_A 87 IRAGEKELILTVLSVES 103 (107)
T ss_dssp HHHCSSEEEEEEECSSC
T ss_pred HHcCCCEEEEEEEcCCC
Confidence 99989999999998643
No 209
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.30 E-value=1.1e-11 Score=97.12 Aligned_cols=76 Identities=24% Similarity=0.314 Sum_probs=66.9
Q ss_pred cCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCeEEE
Q psy4596 265 EGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRYSGHQISL 344 (439)
Q Consensus 265 ~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l 344 (439)
....|||.+.++.. ...+++|..|.++|||+++| |++||+|++|||+++.++++.++..+++..+..+.|
T Consensus 16 ~~~~~G~~l~gg~~---------~~~~v~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l 85 (94)
T 2eeg_A 16 GPSPWGFRLVGGRD---------FSAPLTISRVHAGSKAALAA-LCPGDLIQAINGESTELMTHLEAQNRIKGCHDHLTL 85 (94)
T ss_dssp CSSCCSCCEECCTT---------TTSCCEECCCCSSSHHHHTT-CCTTCEEEEETTEETTTCCHHHHHHHHHTCCSCEEE
T ss_pred CCCccCEEEECccC---------CCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEE
Confidence 34679999988652 23479999999999999999 999999999999999999999999999988889999
Q ss_pred EEecCC
Q psy4596 345 TVCKGF 350 (439)
Q Consensus 345 ~v~r~~ 350 (439)
+|.|..
T Consensus 86 ~v~R~g 91 (94)
T 2eeg_A 86 SVSSGP 91 (94)
T ss_dssp EEECCS
T ss_pred EEEeCC
Confidence 998864
No 210
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=99.30 E-value=1.3e-11 Score=102.67 Aligned_cols=78 Identities=27% Similarity=0.546 Sum_probs=68.3
Q ss_pred cCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcC--CCeE
Q psy4596 265 EGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRYS--GHQI 342 (439)
Q Consensus 265 ~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~--~~~v 342 (439)
...+|||++.++.. ...+++|..|.++|+|+++|+|++||+|++|||+++.+++|.+++++|+.. +..|
T Consensus 27 ~~~g~G~~i~g~~~---------~~~~v~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~~~~g~~v 97 (129)
T 2kpk_A 27 SSRGFGFTVVGGDE---------PDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASV 97 (129)
T ss_dssp CSSCCSEEEEEEEE---------TTEEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTSCHHHHHHHHHHSCTTEEE
T ss_pred CCCcccEEEeCccC---------CCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeE
Confidence 45679999987542 133799999999999999999999999999999999999999999999986 7889
Q ss_pred EEEEecCCc
Q psy4596 343 SLTVCKGFE 351 (439)
Q Consensus 343 ~l~v~r~~~ 351 (439)
.|+|.|...
T Consensus 98 ~l~v~R~~~ 106 (129)
T 2kpk_A 98 DLELCRGYP 106 (129)
T ss_dssp EEEEEECSC
T ss_pred EEEEEeCCC
Confidence 999999753
No 211
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=99.30 E-value=8.8e-12 Score=97.80 Aligned_cols=81 Identities=26% Similarity=0.409 Sum_probs=68.3
Q ss_pred eeeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhc
Q psy4596 258 EITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRY 337 (439)
Q Consensus 258 ~v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~ 337 (439)
.+.+.+ ...+|||.+.++.. ..+++|..|.++|||+++| |++||+|++|||+++.+++|.+++.+|+.
T Consensus 8 ~v~l~~-~~~~~G~~l~~~~~----------~~~~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~ 75 (95)
T 3r68_A 8 VVVIKK-GSNGYGFYLRAGPE----------QKGQIIKDIEPGSPAEAAG-LKNNDLVVAVNGKSVEALDHDGVVEMIRK 75 (95)
T ss_dssp EEEEEC-BTTBCSCEEEEC------------CCSEEEECCCTTSHHHHHT-CCTTEEEEEETTEECTTCCHHHHHHHHHT
T ss_pred EEEEec-CCCcccEEEEecCC----------CCCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 344443 45789999976531 2389999999999999999 99999999999999999999999999999
Q ss_pred CCCeEEEEEecCC
Q psy4596 338 SGHQISLTVCKGF 350 (439)
Q Consensus 338 ~~~~v~l~v~r~~ 350 (439)
.+..+.+++.|..
T Consensus 76 ~~~~~~~~~~r~~ 88 (95)
T 3r68_A 76 GGDQTTLLVLDKE 88 (95)
T ss_dssp TTTEEEEEEEECC
T ss_pred CCCeEEEEEECCc
Confidence 8899999888764
No 212
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.30 E-value=3.3e-11 Score=97.76 Aligned_cols=83 Identities=28% Similarity=0.407 Sum_probs=72.4
Q ss_pred eeEEEEEecCC--CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCC-CCCCEEEEECCeeCCCCCHHHHHHH
Q psy4596 159 FLQDVVLPKSG--PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKL-RMGDRILAVNGRDVSKVTHEEAVLA 235 (439)
Q Consensus 159 ~~~~v~l~~~~--~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L-~~GD~Il~VNg~~v~~~~~~~~~~~ 235 (439)
..+.|.|.|.. +|||.+... ..+++|..|.++|||+++| | ++||+|++|||+++.++++.++...
T Consensus 25 ~~~~v~l~k~~~~~lG~~i~~~-----------~~gv~V~~V~~~spA~~aG-ll~~GD~I~~vng~~v~~~~~~~~~~~ 92 (113)
T 1va8_A 25 TVKIVRIEKARDIPLGATVRNE-----------MDSVIISRIVKGGAAEKSG-LLHEGDEVLEINGIEIRGKDVNEVFDL 92 (113)
T ss_dssp ECEEEEEEECTTCCCCEEEEEC-----------SSSEEEEEECTTSHHHHHT-CCCTTCEEEEETTEECTTCCHHHHHHH
T ss_pred ceEEEEEEeCCCCceeEEEEeC-----------CCCEEEEEeCCCCHHHHcC-CCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 56778888865 799999874 2379999999999999999 7 9999999999999999999999999
Q ss_pred HhCCCCeEEEEEecCCCC
Q psy4596 236 LLEPCPEILLKIQHDPHP 253 (439)
Q Consensus 236 l~~~~~~v~l~v~r~~~~ 253 (439)
++.....+.|+|.|.+..
T Consensus 93 l~~~~~~v~l~v~r~~~~ 110 (113)
T 1va8_A 93 LSDMHGTLTFVLIPSSGP 110 (113)
T ss_dssp HHHCCEEEEEEEECCCCC
T ss_pred HHcCCCeEEEEEEECCcc
Confidence 887777899999987653
No 213
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.30 E-value=1.5e-11 Score=100.44 Aligned_cols=87 Identities=29% Similarity=0.330 Sum_probs=75.4
Q ss_pred eeEEEEEecCC--CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHH
Q psy4596 159 FLQDVVLPKSG--PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLAL 236 (439)
Q Consensus 159 ~~~~v~l~~~~--~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l 236 (439)
..+.|.|.+.. +|||.+.++.+.. ..+++|..|.++|+|+++|+|++||+|++|||.++.++++.++...+
T Consensus 15 ~~~~v~l~k~~~~~lG~~i~~~~~~~-------~~~~~V~~V~~~spA~~aG~l~~GD~Il~Ing~~v~~~~~~~~~~~l 87 (117)
T 1v62_A 15 GPLMVEIVKTPGSALGISLTTTSLRN-------KSVITIDRIKPASVVDRSGALHPGDHILSIDGTSMEHCSLLEATKLL 87 (117)
T ss_dssp SSEEEEEECCTTCCCCCEEEEECCSS-------SCEEEEEECCTTSHHHHHTCCCTTCBEEEETTEETTSCCHHHHHHHH
T ss_pred CcEEEEEEcCCCCcccEEEEccCCCC-------CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 45778888864 8999999865421 23599999999999999999999999999999999988999999999
Q ss_pred hCCCCeEEEEEecCCC
Q psy4596 237 LEPCPEILLKIQHDPH 252 (439)
Q Consensus 237 ~~~~~~v~l~v~r~~~ 252 (439)
+..+..+.|+|.|.+.
T Consensus 88 ~~~g~~v~l~v~r~~~ 103 (117)
T 1v62_A 88 ASISEKVRLEILPVPQ 103 (117)
T ss_dssp HSCSSEEEEEECCBTT
T ss_pred HhCCCeEEEEEEECCC
Confidence 9888999999999764
No 214
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.30 E-value=1.3e-11 Score=100.99 Aligned_cols=87 Identities=30% Similarity=0.392 Sum_probs=72.9
Q ss_pred eeEEEEEecCCCccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhc-CCCCCCCEEEEECCeeCCCCCHHHHHHHHh
Q psy4596 159 FLQDVVLPKSGPLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALS-GKLRMGDRILAVNGRDVSKVTHEEAVLALL 237 (439)
Q Consensus 159 ~~~~v~l~~~~~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~-G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~ 237 (439)
..+.+.+.+.++|||+|.++.+.. ...++|..|.++|||+++ | |++||+|++|||.++.+++|.+++..|+
T Consensus 18 ~~~~~~~~~~~glG~~i~gg~~~~-------~~~i~I~~V~~gspA~~agg-L~~GD~Il~Ing~~v~~~~~~~~~~~l~ 89 (118)
T 1v6b_A 18 DVRLLRIKKEGSLDLALEGGVDSP-------VGKVVVSAVYEGGAAERHGG-VVKGDEIMAINGKIVTDYTLAEAEAALQ 89 (118)
T ss_dssp CEEEEEEESCSCCCCEEEEBTTSS-------SCSEEEEECCTTSHHHHHCS-SCTTCEEEEESSCBCTTCBHHHHHHHHH
T ss_pred eEEEEEECCCCccCEEEEcccCCC-------CCCEEEEEECCCCHHHHcCC-CCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 356677777789999999876532 224999999999999999 7 9999999999999999999999998886
Q ss_pred CC----CCeEEEEEecCCCC
Q psy4596 238 EP----CPEILLKIQHDPHP 253 (439)
Q Consensus 238 ~~----~~~v~l~v~r~~~~ 253 (439)
.. +..+.|+|.|.+..
T Consensus 90 ~~~~~~g~~v~l~v~r~~~~ 109 (118)
T 1v6b_A 90 KAWNQGGDWIDLVVAVCPPK 109 (118)
T ss_dssp HHHHHTCSEEEEEEECCCSC
T ss_pred HhhhcCCCeEEEEEEeCCcc
Confidence 43 78899999996543
No 215
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=99.30 E-value=4.1e-11 Score=96.86 Aligned_cols=91 Identities=29% Similarity=0.400 Sum_probs=75.5
Q ss_pred ceeEEEEEecCC-CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHH
Q psy4596 158 LFLQDVVLPKSG-PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLAL 236 (439)
Q Consensus 158 ~~~~~v~l~~~~-~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l 236 (439)
.....+.+.+.. +|||++.+..+... ...|++|..|.++|||+++|+|++||+|++|||.++.++++.++...+
T Consensus 10 ~~~~~~~l~~~~~glG~~~~~~~~~~~-----~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l 84 (111)
T 2koj_A 10 GKRLNIQLKKGTEGLGFSITSRDVTIG-----GSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLAGKSQEEVVSLL 84 (111)
T ss_dssp CEEEEEEEECBTTBTCEEEEECSCSSS-----SSSCEEEEEECSSSHHHHHCSSCTTCEEEEETTEECTTSCHHHHHHHH
T ss_pred CcEEEEEEEECCCccCEEEEeccCCCC-----CCcCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 356677787766 99999998654211 134899999999999999998999999999999999988999999888
Q ss_pred hCC--CCeEEEEEecCCCC
Q psy4596 237 LEP--CPEILLKIQHDPHP 253 (439)
Q Consensus 237 ~~~--~~~v~l~v~r~~~~ 253 (439)
+.. +..+.|+|.|++..
T Consensus 85 ~~~~~g~~v~l~v~R~~~~ 103 (111)
T 2koj_A 85 RSTKMEGTVSLLVFRQEEA 103 (111)
T ss_dssp HHCCCSSEEEEEEEECCCC
T ss_pred HhCCCCCeEEEEEEeCCCC
Confidence 753 78899999998754
No 216
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.30 E-value=1.4e-11 Score=97.98 Aligned_cols=82 Identities=26% Similarity=0.406 Sum_probs=69.4
Q ss_pred eeeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhc
Q psy4596 258 EITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRY 337 (439)
Q Consensus 258 ~v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~ 337 (439)
.+.+.+ ...+|||.+.++. ...+++|..|.++|||+++| |++||+|++|||+++.++++.+++.+|+.
T Consensus 9 ~v~l~k-~~~g~G~~l~~~~----------~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~ 76 (102)
T 2d90_A 9 VVVIKK-GSNGYGFYLRAGP----------EQKGQIIKDIEPGSPAEAAG-LKNNDLVVAVNGKSVEALDHDGVVEMIRK 76 (102)
T ss_dssp EEEEEC-CSSSSSCEEEECS----------SSSSEEEECCCTTSTTTTTT-CCTTCEEEEESSCBCTTSCHHHHHHHHHH
T ss_pred EEEEee-CCCCccEEEEeec----------CCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 344443 4568999998642 13489999999999999999 99999999999999999999999999998
Q ss_pred CCCeEEEEEecCCc
Q psy4596 338 SGHQISLTVCKGFE 351 (439)
Q Consensus 338 ~~~~v~l~v~r~~~ 351 (439)
.+..+.|+|.|...
T Consensus 77 ~g~~v~l~v~r~~~ 90 (102)
T 2d90_A 77 GGDQTTLLVLDKEA 90 (102)
T ss_dssp STTEEEEEECSTTC
T ss_pred CCCEEEEEEEECCC
Confidence 89999999987643
No 217
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.30 E-value=7.6e-12 Score=98.02 Aligned_cols=84 Identities=29% Similarity=0.509 Sum_probs=71.0
Q ss_pred EEEEEecCCCccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHhCCC
Q psy4596 161 QDVVLPKSGPLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALLEPC 240 (439)
Q Consensus 161 ~~v~l~~~~~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~ 240 (439)
..+.+....+|||++.++.+. ..|++|..|.++|||+++| |++||+|++|||.++.++++.++...++...
T Consensus 8 ~~~~~~~~~~lG~~l~~g~~~--------~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~ 78 (94)
T 1vb7_A 8 LTVDVAGPAPWGFRISGGRDF--------HTPIIVTKVTERGKAEAAD-LRPGDIIVAINGQSAENMLHAEAQSKIRQSA 78 (94)
T ss_dssp EEEEECSSSCCSBCCEEETTT--------TEEEECCCBCTTSSHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCC
T ss_pred EEEEecCCCCccEEEecccCC--------CCCeEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 344454445999999886542 2379999999999999999 9999999999999999999999999888767
Q ss_pred CeEEEEEecCCCC
Q psy4596 241 PEILLKIQHDPHP 253 (439)
Q Consensus 241 ~~v~l~v~r~~~~ 253 (439)
..+.|+|.|++..
T Consensus 79 ~~v~l~v~R~g~~ 91 (94)
T 1vb7_A 79 SPLRLQLDRSSGP 91 (94)
T ss_dssp SSEEEEEECCCCC
T ss_pred CcEEEEEEECCcC
Confidence 8899999998754
No 218
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.30 E-value=5.6e-12 Score=98.76 Aligned_cols=83 Identities=24% Similarity=0.340 Sum_probs=70.5
Q ss_pred eeeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhc
Q psy4596 258 EITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRY 337 (439)
Q Consensus 258 ~v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~ 337 (439)
.+.+.......|||.+.++.. ...+++|..|.++|||+++| |++||+|++|||+++.+++|.++..+|+.
T Consensus 7 ~~~~~~~~~~~lG~~l~~g~~---------~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~ 76 (94)
T 1vb7_A 7 GLTVDVAGPAPWGFRISGGRD---------FHTPIIVTKVTERGKAEAAD-LRPGDIIVAINGQSAENMLHAEAQSKIRQ 76 (94)
T ss_dssp CEEEEECSSSCCSBCCEEETT---------TTEEEECCCBCTTSSHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHT
T ss_pred EEEEEecCCCCccEEEecccC---------CCCCeEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 344444556789999987542 13479999999999999999 99999999999999999999999999998
Q ss_pred CCCeEEEEEecCC
Q psy4596 338 SGHQISLTVCKGF 350 (439)
Q Consensus 338 ~~~~v~l~v~r~~ 350 (439)
.+..+.|+|.|..
T Consensus 77 ~~~~v~l~v~R~g 89 (94)
T 1vb7_A 77 SASPLRLQLDRSS 89 (94)
T ss_dssp CCSSEEEEEECCC
T ss_pred CCCcEEEEEEECC
Confidence 7799999999864
No 219
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.30 E-value=1.4e-11 Score=100.00 Aligned_cols=81 Identities=23% Similarity=0.429 Sum_probs=70.2
Q ss_pred ceeeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCC-CCCCEEEEECCEEcCCCCHHHHHHHH
Q psy4596 257 QEITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRL-KVGMRLLEVNGMSLLGASHQEAVNTL 335 (439)
Q Consensus 257 ~~v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L-~~GD~Il~VNg~~v~~~~~~~~~~~l 335 (439)
+.+.+.+....+|||.+... ..+++|..|.++|||+++| | ++||+|++|||+++.++++.+++.+|
T Consensus 27 ~~v~l~k~~~~~lG~~i~~~------------~~gv~V~~V~~~spA~~aG-ll~~GD~I~~vng~~v~~~~~~~~~~~l 93 (113)
T 1va8_A 27 KIVRIEKARDIPLGATVRNE------------MDSVIISRIVKGGAAEKSG-LLHEGDEVLEINGIEIRGKDVNEVFDLL 93 (113)
T ss_dssp EEEEEEECTTCCCCEEEEEC------------SSSEEEEEECTTSHHHHHT-CCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred EEEEEEeCCCCceeEEEEeC------------CCCEEEEEeCCCCHHHHcC-CCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 34566666666899998754 2489999999999999999 7 99999999999999999999999999
Q ss_pred hcCCCeEEEEEecCC
Q psy4596 336 RYSGHQISLTVCKGF 350 (439)
Q Consensus 336 ~~~~~~v~l~v~r~~ 350 (439)
+..++.+.|+|.|..
T Consensus 94 ~~~~~~v~l~v~r~~ 108 (113)
T 1va8_A 94 SDMHGTLTFVLIPSS 108 (113)
T ss_dssp HHCCEEEEEEEECCC
T ss_pred HcCCCeEEEEEEECC
Confidence 988889999998764
No 220
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=99.29 E-value=1.3e-11 Score=99.20 Aligned_cols=84 Identities=31% Similarity=0.608 Sum_probs=72.2
Q ss_pred eeEEEEEecCC--CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcC-CCCCCCEEEEECCeeCCCCCHHHHHHH
Q psy4596 159 FLQDVVLPKSG--PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSG-KLRMGDRILAVNGRDVSKVTHEEAVLA 235 (439)
Q Consensus 159 ~~~~v~l~~~~--~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G-~L~~GD~Il~VNg~~v~~~~~~~~~~~ 235 (439)
..+.+.|.+.. +|||.+.++.+. ..+++|..|.++|+|+++| ||++||+|++|||.++.+++|.+++..
T Consensus 17 ~~~~v~l~~~~~~~~G~~~~gg~~~--------~~~~~V~~V~~~spA~~aG~rL~~GD~Il~ing~~v~~~~~~~~~~~ 88 (107)
T 3nfk_A 17 NLVLIRMKPDENGRFGFNVKGGYDQ--------KMPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLF 88 (107)
T ss_dssp CCEEEEECCCTTSCCCEEEEEEGGG--------TEEEEEEEECTTSHHHHSSSCCCTTCEEEEETTEECTTCCHHHHHHH
T ss_pred CEEEEEEEcCCCCCCCEEEEccCCC--------CCCeEEEEECCCCchHHcCCccCCCCEEEEECCEECCCCCHHHHHHH
Confidence 46778888765 999999987552 2379999999999999999 699999999999999999999999988
Q ss_pred HhCCCC----eEEEEEecC
Q psy4596 236 LLEPCP----EILLKIQHD 250 (439)
Q Consensus 236 l~~~~~----~v~l~v~r~ 250 (439)
++..+. .+.|+|.|+
T Consensus 89 i~~~~~~~~~~v~l~v~r~ 107 (107)
T 3nfk_A 89 IKASCERHSGELMLLVRPN 107 (107)
T ss_dssp HHCGGGSBTTBEEEEEECC
T ss_pred HHhccccCCcEEEEEEEcC
Confidence 887654 899998874
No 221
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.29 E-value=1.7e-11 Score=102.06 Aligned_cols=90 Identities=24% Similarity=0.567 Sum_probs=74.3
Q ss_pred eeeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhc
Q psy4596 258 EITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRY 337 (439)
Q Consensus 258 ~v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~ 337 (439)
.+.+.+.....|||++.++..... .....+++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+|+.
T Consensus 18 ~v~l~~~~~~~lG~~i~~~~~~~~----~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~ 93 (129)
T 2dmz_A 18 NVELVRKDGQSLGIRIVGYVGTSH----TGEASGIYVKSVIPGSAAYHNGHIQVNDKIVAVDGVNIQGFANHDVVEVLRN 93 (129)
T ss_dssp EEEECCCTTCCCCEEEEEECCCSS----SCCCCEEEEEEECTTSHHHHHTCCCSSCBEEEETTBCCTTCCHHHHHHHHHH
T ss_pred EEEEEeCCCCCcCEEEEeecCCcc----cCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 344445567889999987543211 1124589999999999999999999999999999999999999999999999
Q ss_pred CCCeEEEEEecCCc
Q psy4596 338 SGHQISLTVCKGFE 351 (439)
Q Consensus 338 ~~~~v~l~v~r~~~ 351 (439)
.+..+.|+|.|...
T Consensus 94 ~~~~v~l~v~R~~~ 107 (129)
T 2dmz_A 94 AGQVVHLTLVRRKT 107 (129)
T ss_dssp CCSSEEEEEEEESS
T ss_pred CCCeEEEEEEeCCc
Confidence 88999999998653
No 222
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=99.29 E-value=4.4e-11 Score=96.35 Aligned_cols=92 Identities=28% Similarity=0.426 Sum_probs=72.8
Q ss_pred eeEEEEEecCC--CccEEEeeCCCCCC-CCC---CCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHH
Q psy4596 159 FLQDVVLPKSG--PLGFSIIGGTDHSC-IPF---GQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEA 232 (439)
Q Consensus 159 ~~~~v~l~~~~--~lG~~i~~~~~~~~-~~~---g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~ 232 (439)
..+.+.|.+.. +|||++.++.+... ..+ .....|++|..|.++|+|+++| |++||+|++|||.++.++++.++
T Consensus 7 ~~~~v~l~~~~~~g~G~~l~~~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~ 85 (109)
T 1q3o_A 7 KEKTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAG-LRMGDFLIEVNGQNVVKVGHRQV 85 (109)
T ss_dssp EEEEEEEECCTTSCCSEEEEESSCCCTTSCCCCCSSCCSSEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHH
T ss_pred CcEEEEEEECCCCCCcEEEEeccCCCCcccccccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHH
Confidence 45678887643 99999998765210 000 0012379999999999999999 99999999999999999999999
Q ss_pred HHHHhCCCCeEEEEEecCC
Q psy4596 233 VLALLEPCPEILLKIQHDP 251 (439)
Q Consensus 233 ~~~l~~~~~~v~l~v~r~~ 251 (439)
...++..+..+.|+|.|..
T Consensus 86 ~~~l~~~~~~v~l~v~~~~ 104 (109)
T 1q3o_A 86 VNMIRQGGNTLMVKVVMVT 104 (109)
T ss_dssp HHHHHHTTTEEEEEEEEEE
T ss_pred HHHHHhCCCEEEEEEEECC
Confidence 9888877888999888754
No 223
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.29 E-value=1.4e-11 Score=100.74 Aligned_cols=88 Identities=25% Similarity=0.413 Sum_probs=71.4
Q ss_pred eeeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhc
Q psy4596 258 EITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRY 337 (439)
Q Consensus 258 ~v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~ 337 (439)
.+.+.+.....|||+|.++..... ......+++|..|.++|||+ +| |++||+|++|||+++.+++|.+++.+++.
T Consensus 17 ~v~l~k~~~~glG~~i~gg~~~~~---~~~~~~gv~V~~V~~~spA~-~g-L~~GD~I~~Vng~~v~~~~~~~~~~~l~~ 91 (117)
T 2csj_A 17 TVTLQKDSKRGFGIAVSGGRDNPH---FENGETSIVISDVLPGGPAD-GL-LQENDRVVMVNGTPMEDVLHSFAVQQLRK 91 (117)
T ss_dssp EEEEECCSSSTTCEEEECCSSCCC---CSSCCCBCEEEEECTTSSHH-HH-BCTTCEEEEESSCBCBTCCHHHHHHHHHH
T ss_pred EEEEEECCCCccCEEEeCCcCCcc---ccCCCCCEEEEEECCCCccc-cc-CCCCCEEEEECCEECCCcCHHHHHHHHhc
Confidence 344555556889999998643211 01124589999999999997 88 99999999999999999999999999999
Q ss_pred CCCeEEEEEecCC
Q psy4596 338 SGHQISLTVCKGF 350 (439)
Q Consensus 338 ~~~~v~l~v~r~~ 350 (439)
.+..+.|+|.|..
T Consensus 92 ~~~~v~l~v~R~~ 104 (117)
T 2csj_A 92 SGKIAAIVVKRPR 104 (117)
T ss_dssp SCSEEEEEEEEEE
T ss_pred CCCeEEEEEEECC
Confidence 9999999999853
No 224
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=99.29 E-value=1e-11 Score=100.76 Aligned_cols=84 Identities=32% Similarity=0.552 Sum_probs=69.6
Q ss_pred cCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCeEEE
Q psy4596 265 EGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRYSGHQISL 344 (439)
Q Consensus 265 ~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l 344 (439)
...+|||++.+...+ ........+++|..|.++|||+++|+|++||+|++|||.++.++++.+++.+++..+..+.|
T Consensus 13 ~~~glG~~l~~~~~~---~~~~~~~~g~~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l 89 (113)
T 2g5m_B 13 DSEGLGISIIGMGAG---ADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLRNTKGRVRF 89 (113)
T ss_dssp CSSCCCCEEEEEECC---CCSSSCCEEEEEEECCTTSHHHHHTCSCTTCBEEEETTEECSSCCHHHHHHHHHHSCSSCEE
T ss_pred CCCCCCEEEEecCCC---CcCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCeEEE
Confidence 346799999872111 11111245899999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCc
Q psy4596 345 TVCKGFE 351 (439)
Q Consensus 345 ~v~r~~~ 351 (439)
+|.|...
T Consensus 90 ~v~R~~~ 96 (113)
T 2g5m_B 90 MIGRERP 96 (113)
T ss_dssp EEEECCC
T ss_pred EEEeCCC
Confidence 9998754
No 225
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=99.29 E-value=5.4e-13 Score=134.27 Aligned_cols=150 Identities=19% Similarity=0.236 Sum_probs=43.7
Q ss_pred cceeEEe------cCcccccCCCCEEEEECCeecCCCCHHHHHHHHhh--cCCeEEEEEEeccccCccccccCCCCCCCC
Q psy4596 14 QAGVILA------AGEVVIHPVGMRLLEVNGMSLLGASHQEAVNTLRY--SGHQISLTVCKGFERGDIERRASTSEGSRS 85 (439)
Q Consensus 14 ~~Gi~vs------a~~~~gL~~GD~Il~VNG~~v~~~~~~~~v~~l~~--~~~~v~L~V~R~~~~~~~~~~~~~~~~~~~ 85 (439)
..|++|. ++..+||++||+|++|||+++.++. +...++.. +++.|+|+|.|+.+...+....
T Consensus 285 ~~G~~V~~V~~gspA~~AGL~~GDvI~~inG~~v~~~~--~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~-------- 354 (448)
T 1ky9_A 285 QRGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISSFA--ALRAQVGTMPVGSKLTLGLLRDGKQVNVNLEL-------- 354 (448)
T ss_dssp CCSEECCCCTTCSSSTTTTCCTTCEECBSSSSBCCSSH--HHHHHTTSSBTTCCCEEEEESSSCEEECCCC---------
T ss_pred CCceEEEEeccCCHHHHcCCCCCCEEEEECCEEcCCHH--HHHHHHHhcCCCCEEEEEEEECCEEEEEEEEE--------
Confidence 3688886 5667789999999999999999884 45555553 6889999999854211111000
Q ss_pred ccccCCCCCcCCCcccccccCccceeeeccccCCCCCCCCCCCCcccccCCCCCcccccccCcCCCCCCCCCceeEEEEE
Q psy4596 86 VTQSMSSLDREDLDTDVFKQGQWSTVVTAHQRLDTGYGLPSNSTVAAHISSSLKPSILVTYNFFSPSVRSSSLFLQDVVL 165 (439)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~v~l 165 (439)
... +..... . ...
T Consensus 355 ------------------------------~~~------~~~~~~----~-------------------------~~~-- 367 (448)
T 1ky9_A 355 ------------------------------QQS------SQNQVD----S-------------------------SSI-- 367 (448)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ------------------------------ecC------CCcccc----c-------------------------ccc--
Confidence 000 000000 0 000
Q ss_pred ecCCCccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHhCCCCeEEE
Q psy4596 166 PKSGPLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALLEPCPEILL 245 (439)
Q Consensus 166 ~~~~~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l 245 (439)
....+|+.+.... ...|++|..|.++|+|+++| |++||+|++|||+++. ++.++...++.....+.|
T Consensus 368 -~~~~~G~~l~~~~---------~~~gv~V~~V~~gspA~~aG-L~~GDiI~~vng~~v~--~~~~l~~~l~~~~~~v~l 434 (448)
T 1ky9_A 368 -FNGIEGAEMSNKG---------KDQGVVVNNVKTGTPAAQIG-LKKGDVIIGANQQAVK--NIAELRKVLDSKPSVLAL 434 (448)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -cccccceEeeccC---------CCCeEEEEEecCCCHHHHcC-CCCCCEEEEECCEECC--CHHHHHHHHHcCCCeEEE
Confidence 0123466654321 13479999999999999999 9999999999999999 677777777765557888
Q ss_pred EEecCCCC
Q psy4596 246 KIQHDPHP 253 (439)
Q Consensus 246 ~v~r~~~~ 253 (439)
+|.|++..
T Consensus 435 ~v~R~g~~ 442 (448)
T 1ky9_A 435 NIQRGDST 442 (448)
T ss_dssp --------
T ss_pred EEEECCEE
Confidence 89887654
No 226
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=99.29 E-value=1.3e-11 Score=97.64 Aligned_cols=89 Identities=26% Similarity=0.278 Sum_probs=71.2
Q ss_pred EEEecCC-CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHhCCCC
Q psy4596 163 VVLPKSG-PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALLEPCP 241 (439)
Q Consensus 163 v~l~~~~-~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~ 241 (439)
+.+.+.+ +|||++.......... .....|++|..|.++|||+++| |++||+|++|||.++.++++.++...++..+.
T Consensus 6 v~l~~~~~~~Gf~l~~~~~~~~~~-~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~ 83 (99)
T 3khf_A 6 IVIHSSGKKYGFSLRAIRVYMGDS-DVYTVHHVVWSVEDGSPAQEAG-LRAGDLITHINGESVLGLVHMDVVELLLKSGN 83 (99)
T ss_dssp EEEEC-CCCCCEEEEEEEEESSSS-SCEEEEEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHHSCS
T ss_pred EEEEeCCCCCcEEEEecccccCcc-ccccCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcCCC
Confidence 6676666 9999998764321100 0011267999999999999999 99999999999999999999999999988899
Q ss_pred eEEEEEecCCCC
Q psy4596 242 EILLKIQHDPHP 253 (439)
Q Consensus 242 ~v~l~v~r~~~~ 253 (439)
.+.|++.|.+..
T Consensus 84 ~v~l~v~r~~~~ 95 (99)
T 3khf_A 84 KISLRTTALENT 95 (99)
T ss_dssp EEEEEEECSCSS
T ss_pred EEEEEEEECCCc
Confidence 999999997643
No 227
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=99.28 E-value=3.4e-11 Score=94.83 Aligned_cols=83 Identities=41% Similarity=0.738 Sum_probs=69.5
Q ss_pred ccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCeEE
Q psy4596 264 QEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRYSGHQIS 343 (439)
Q Consensus 264 ~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~ 343 (439)
....+|||++.++.... ++.....+++|..|.++|||+++| |++||+|++|||+++.++++.+++..++..+..+.
T Consensus 11 ~~~~glG~~i~~g~~~~---~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~ 86 (97)
T 2w4f_A 11 RQTGGLGISIAGGKGST---PYKGDDEGIFISRVSEEGPAARAG-VRVGDKLLEVNGVALQGAEHHEAVEALRGAGTAVQ 86 (97)
T ss_dssp CBTTBSSEEEEECTTSC---CSBTTBCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTSCSEEE
T ss_pred eCCCceeEEEECCccCC---cccCCCCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHhCCCCeEE
Confidence 33678999998764321 111234589999999999999999 99999999999999999999999988888899999
Q ss_pred EEEecCC
Q psy4596 344 LTVCKGF 350 (439)
Q Consensus 344 l~v~r~~ 350 (439)
|+|.|..
T Consensus 87 l~v~R~g 93 (97)
T 2w4f_A 87 MRVWRER 93 (97)
T ss_dssp EEEECCS
T ss_pred EEEEeCC
Confidence 9999864
No 228
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=99.28 E-value=2.3e-11 Score=99.71 Aligned_cols=84 Identities=44% Similarity=0.730 Sum_probs=74.3
Q ss_pred eeEEEEEecCC-CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHh
Q psy4596 159 FLQDVVLPKSG-PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALL 237 (439)
Q Consensus 159 ~~~~v~l~~~~-~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~ 237 (439)
..+.|.|.+.. +|||++.+..+ ..|++|..|.++|||+++|+|++||+|++|||.++.++++.++...++
T Consensus 14 ~~~~v~l~k~~~glG~~l~~~~~---------~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~ 84 (119)
T 1tp5_A 14 EPRRIVIHRGSTGLGFNIVGGED---------GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALK 84 (119)
T ss_dssp SCEEEEEECTTSCCCEEEEECGG---------GCCEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHHH
T ss_pred ccEEEEEEECCCCccEEEecCCC---------CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 56789998876 89999998653 237999999999999999999999999999999999999888888888
Q ss_pred CCCCeEEEEEecCC
Q psy4596 238 EPCPEILLKIQHDP 251 (439)
Q Consensus 238 ~~~~~v~l~v~r~~ 251 (439)
..+..+.|+|.|.+
T Consensus 85 ~~~~~v~l~v~r~~ 98 (119)
T 1tp5_A 85 NAGQTVTIIAQYKP 98 (119)
T ss_dssp TSCSEEEEEEEECH
T ss_pred cCCCeEEEEEEECC
Confidence 88889999999865
No 229
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.28 E-value=1e-11 Score=101.60 Aligned_cols=76 Identities=26% Similarity=0.410 Sum_probs=65.2
Q ss_pred cccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcC----CCeE
Q psy4596 267 EKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRYS----GHQI 342 (439)
Q Consensus 267 ~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~----~~~v 342 (439)
.+|||+|.++.... ...++|.+|.++|||+++|.|++||+|++|||+++.+++|++++++|+.. +..+
T Consensus 28 ~glG~~i~gg~~~~--------~~~i~I~~V~~gspA~~aggL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~~~g~~v 99 (118)
T 1v6b_A 28 GSLDLALEGGVDSP--------VGKVVVSAVYEGGAAERHGGVVKGDEIMAINGKIVTDYTLAEAEAALQKAWNQGGDWI 99 (118)
T ss_dssp SCCCCEEEEBTTSS--------SCSEEEEECCTTSHHHHHCSSCTTCEEEEESSCBCTTCBHHHHHHHHHHHHHHTCSEE
T ss_pred CccCEEEEcccCCC--------CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhhhcCCCeE
Confidence 47999998865321 12599999999999999933999999999999999999999999999874 7899
Q ss_pred EEEEecCC
Q psy4596 343 SLTVCKGF 350 (439)
Q Consensus 343 ~l~v~r~~ 350 (439)
.|+|.|..
T Consensus 100 ~l~v~r~~ 107 (118)
T 1v6b_A 100 DLVVAVCP 107 (118)
T ss_dssp EEEEECCC
T ss_pred EEEEEeCC
Confidence 99999854
No 230
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.28 E-value=2e-11 Score=99.78 Aligned_cols=92 Identities=27% Similarity=0.387 Sum_probs=76.4
Q ss_pred CceeEEEEEecCC--CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHH
Q psy4596 157 SLFLQDVVLPKSG--PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVL 234 (439)
Q Consensus 157 ~~~~~~v~l~~~~--~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~ 234 (439)
.++.+.|.|.|.. +|||+|.++.+.... .....|++|..|.++|+|+ +| |++||+|++|||.++.+++|.+++.
T Consensus 12 ~~~~~~v~l~k~~~~glG~~i~gg~~~~~~--~~~~~gv~V~~V~~~spA~-~g-L~~GD~I~~Vng~~v~~~~~~~~~~ 87 (117)
T 2csj_A 12 IWEQYTVTLQKDSKRGFGIAVSGGRDNPHF--ENGETSIVISDVLPGGPAD-GL-LQENDRVVMVNGTPMEDVLHSFAVQ 87 (117)
T ss_dssp EEEEEEEEEECCSSSTTCEEEECCSSCCCC--SSCCCBCEEEEECTTSSHH-HH-BCTTCEEEEESSCBCBTCCHHHHHH
T ss_pred cceEEEEEEEECCCCccCEEEeCCcCCccc--cCCCCCEEEEEECCCCccc-cc-CCCCCEEEEECCEECCCcCHHHHHH
Confidence 3467788888864 999999988664321 1124589999999999997 88 9999999999999999999999999
Q ss_pred HHhCCCCeEEEEEecCCC
Q psy4596 235 ALLEPCPEILLKIQHDPH 252 (439)
Q Consensus 235 ~l~~~~~~v~l~v~r~~~ 252 (439)
.++..+..+.|+|.|...
T Consensus 88 ~l~~~~~~v~l~v~R~~~ 105 (117)
T 2csj_A 88 QLRKSGKIAAIVVKRPRK 105 (117)
T ss_dssp HHHHSCSEEEEEEEEEEE
T ss_pred HHhcCCCeEEEEEEECCc
Confidence 888888999999998653
No 231
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.28 E-value=1e-11 Score=98.99 Aligned_cols=78 Identities=22% Similarity=0.423 Sum_probs=67.9
Q ss_pred cCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCeEEE
Q psy4596 265 EGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRYSGHQISL 344 (439)
Q Consensus 265 ~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l 344 (439)
....|||.+.++.. ...+++|..|.++|||+++| |++||+|++|||+++.++++.+++.+++..+..+.|
T Consensus 13 ~~~~~G~~l~gg~~---------~~~~v~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l 82 (103)
T 1wf7_A 13 GPAPWGFRLQGGKD---------FNMPLTISSLKDGGKASQAH-VRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSLNM 82 (103)
T ss_dssp SSSCCSCCEEEETT---------TTEEEEECCCCTTCHHHHTT-CCTTCBEEEETTEECSSCCHHHHHHHHHHCSSEEEE
T ss_pred CCCccCEEEecccc---------CCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEE
Confidence 35679999987642 13368999999999999999 999999999999999999999999999988899999
Q ss_pred EEecCCcc
Q psy4596 345 TVCKGFER 352 (439)
Q Consensus 345 ~v~r~~~~ 352 (439)
+|.|....
T Consensus 83 ~v~R~g~~ 90 (103)
T 1wf7_A 83 TLQRASAA 90 (103)
T ss_dssp EECCCSCC
T ss_pred EEEeCCCc
Confidence 99886543
No 232
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=99.28 E-value=2.7e-11 Score=93.55 Aligned_cols=81 Identities=30% Similarity=0.414 Sum_probs=67.2
Q ss_pred eeEEEEEecCC-CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHh
Q psy4596 159 FLQDVVLPKSG-PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALL 237 (439)
Q Consensus 159 ~~~~v~l~~~~-~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~ 237 (439)
+.++|+|.|.. +|||++....+ ..+++|..| ++|||+ +| |++||+|++|||.++.++++.++...++
T Consensus 3 ~~~~v~l~k~~~g~G~~~~~~~~---------~~~~~v~~v-~~spA~-aG-l~~GD~I~~vng~~v~~~~~~~~~~~l~ 70 (88)
T 3bpu_A 3 ELITVHIVKGPMGFGFTIADSPG---------GGGQRVKQI-VDSPRS-RG-LKEGDLIVEVNKKNVQALTHNQVVDMLV 70 (88)
T ss_dssp EEEEEEEECBTTBSSCEEEECTT---------SSSEEEEEC-CC--CC-TT-CCTTCEEEEETTEECTTSCHHHHHHHHH
T ss_pred cEEEEEEEcCCCceeEEEEecCC---------CCcEEEEEe-cCChhH-hC-CCCCCEEEEECCEEcCCCCHHHHHHHHH
Confidence 56788999876 99999987533 237899887 999999 99 9999999999999999998999998887
Q ss_pred C--CCCeEEEEEecCC
Q psy4596 238 E--PCPEILLKIQHDP 251 (439)
Q Consensus 238 ~--~~~~v~l~v~r~~ 251 (439)
+ .+..+.|+|.|++
T Consensus 71 ~~~~g~~v~l~v~R~g 86 (88)
T 3bpu_A 71 ESPKGSEVTLLVQRQT 86 (88)
T ss_dssp TSCTTCEEEEEEEEEC
T ss_pred hCCCCCEEEEEEEeCC
Confidence 4 5788999998865
No 233
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.28 E-value=2.8e-11 Score=96.64 Aligned_cols=85 Identities=31% Similarity=0.509 Sum_probs=70.5
Q ss_pred eeeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhc
Q psy4596 258 EITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRY 337 (439)
Q Consensus 258 ~v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~ 337 (439)
.+.+.+ ...+|||.+.++... ....+++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+++.
T Consensus 14 ~v~l~~-~~~g~G~~l~~~~~~-------~~~~~v~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~ 85 (104)
T 2djt_A 14 SVELVR-GYAGFGLTLGGGRDV-------AGDTPLAVRGLLKDGPAQRCGRLEVGDLVLHINGESTQGLTHAQAVERIRA 85 (104)
T ss_dssp EEEEEC-CSSSCCEEEECCEET-------TEECCCEEEEECTTCHHHHHCSCCTTCBEEEETTEECTTCCHHHHHHHHHH
T ss_pred EEEEEe-CCCCccEEEEeccCC-------CCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 344443 346899999875421 013479999999999999999999999999999999999999999999998
Q ss_pred CCCeEEEEEecCC
Q psy4596 338 SGHQISLTVCKGF 350 (439)
Q Consensus 338 ~~~~v~l~v~r~~ 350 (439)
.+..+.|+|.|..
T Consensus 86 ~g~~v~l~v~R~g 98 (104)
T 2djt_A 86 GGPQLHLVIRRPL 98 (104)
T ss_dssp TCSEEEEEECCCC
T ss_pred CCCeEEEEEEECC
Confidence 8899999998864
No 234
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=99.27 E-value=2.5e-11 Score=97.54 Aligned_cols=82 Identities=21% Similarity=0.288 Sum_probs=65.0
Q ss_pred eeeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhc
Q psy4596 258 EITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRY 337 (439)
Q Consensus 258 ~v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~ 337 (439)
++.+.+. ..+|||+|.++. .+.+|..|.+ +|+.+| |++||+|++|||+++.+++|.+++++|++
T Consensus 15 ~V~L~Kg-~~G~GFsI~~~~------------~g~~V~~I~~--~~~~aG-L~~GD~Il~VNG~~v~~~~h~evv~~lk~ 78 (113)
T 3soe_A 15 TIPLIKG-PKGFGFAIADSP------------TGQKVKMILD--SQWCQG-LQKGDIIKEIYHQNVQNLTHLQVVEVLKQ 78 (113)
T ss_dssp EEEEECB-TTBSSEEEEEET------------TEEEEEEESC--GGGSTT-CCTTCEEEEETTEECTTSCHHHHHHHHHH
T ss_pred EEEEEEC-CCcccEEEeCCC------------CCcEEEEecC--hHHhCC-CCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 4445444 568999996432 2678999988 577778 99999999999999999999999999998
Q ss_pred C--CCeEEEEEecCCccCcc
Q psy4596 338 S--GHQISLTVCKGFERGDI 355 (439)
Q Consensus 338 ~--~~~v~l~v~r~~~~~~~ 355 (439)
+ +..+.|+|.|.......
T Consensus 79 ~~~G~~v~L~V~R~g~~~p~ 98 (113)
T 3soe_A 79 FPVGADVPLLILRGGPPSPT 98 (113)
T ss_dssp SCTTCEEEEEEEESSCC---
T ss_pred CCCCCEEEEEEEECCccCcc
Confidence 5 67999999997654433
No 235
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=99.27 E-value=2.2e-12 Score=115.01 Aligned_cols=91 Identities=31% Similarity=0.528 Sum_probs=76.6
Q ss_pred cCCCCCCcceeeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCH
Q psy4596 249 HDPHPEGFQEITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASH 328 (439)
Q Consensus 249 r~~~~~~~~~v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~ 328 (439)
+.+.......+.+.+....+|||++.++.. ...+++|..|.++|||+++| |++||+|++|||.++.++++
T Consensus 78 ~~~~~~~~~~v~l~k~~~~~lG~~i~~~~~---------~~~~~~V~~V~~gspA~~aG-L~~GD~Il~vng~~v~~~~~ 147 (192)
T 3k1r_A 78 TPRRSRKLKEVRLDRLHPEGLGLSVRGGLE---------FGCGLFISHLIKGGQADSVG-LQVGDEIVRINGYSISSCTH 147 (192)
T ss_dssp SCCCCSSCEEEEEETTSTTCCCEEEEEEGG---------GTEEEEEEEECTTSHHHHTT-CCTTEEEEEETTEECTTCCH
T ss_pred CCCCCCceEEEEEEeCCCCceeEEEEcccc---------cCCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCH
Confidence 334444445677777767899999987642 13479999999999999999 99999999999999999999
Q ss_pred HHHHHHHhcCCCeEEEEEecCC
Q psy4596 329 QEAVNTLRYSGHQISLTVCKGF 350 (439)
Q Consensus 329 ~~~~~~l~~~~~~v~l~v~r~~ 350 (439)
.+++.+|+. +..+.|+|.|..
T Consensus 148 ~~~~~~l~~-~~~v~l~v~r~g 168 (192)
T 3k1r_A 148 EEVINLIRT-EKTVSIKVRHIG 168 (192)
T ss_dssp HHHHHHHTS-SSEEEEEEEECC
T ss_pred HHHHHHHcC-CCeEEEEEEECC
Confidence 999999999 999999999864
No 236
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.27 E-value=1.8e-11 Score=98.16 Aligned_cols=84 Identities=30% Similarity=0.478 Sum_probs=70.9
Q ss_pred ceeeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHh
Q psy4596 257 QEITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLR 336 (439)
Q Consensus 257 ~~v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~ 336 (439)
+.+.+.+ ....|||.+.+.. ...+++|..|.++|||+++| |++||+|++|||+++.++++.+++.+++
T Consensus 10 r~v~l~k-~~~~~G~~l~~~~----------~~~g~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~~~ 77 (106)
T 2eei_A 10 RLCYLVK-EGGSYGFSLKTVQ----------GKKGVYMTDITPQGVAMRAG-VLADDHLIEVNGENVEDASHEEVVEKVK 77 (106)
T ss_dssp EEEEEEC-CSSSCSCCEECCS----------SCCSCEECCCCTTSHHHHHT-CCSSEEEEEETTEECTTCCHHHHHHHHH
T ss_pred EEEEEEE-CCCCCCEEEEecc----------CCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 3444444 5778999997643 13489999999999999999 9999999999999999999999999999
Q ss_pred cCCCeEEEEEecCCcc
Q psy4596 337 YSGHQISLTVCKGFER 352 (439)
Q Consensus 337 ~~~~~v~l~v~r~~~~ 352 (439)
..+..+.|+|.|....
T Consensus 78 ~~~~~v~l~v~r~~~~ 93 (106)
T 2eei_A 78 KSGSRVMFLLVDKETD 93 (106)
T ss_dssp HHCSEEEEEECCTTTS
T ss_pred hCCCeEEEEEEcCchh
Confidence 8889999999886543
No 237
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=99.27 E-value=4e-11 Score=96.27 Aligned_cols=82 Identities=26% Similarity=0.335 Sum_probs=69.7
Q ss_pred eeEEEEEecCC-CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHh
Q psy4596 159 FLQDVVLPKSG-PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALL 237 (439)
Q Consensus 159 ~~~~v~l~~~~-~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~ 237 (439)
+..+|.|.|.. +|||+|.+.. .|.+|..|.+ ++..+| |++||+|++|||.++.+++|.+++..|+
T Consensus 12 ~~~~V~L~Kg~~G~GFsI~~~~-----------~g~~V~~I~~--~~~~aG-L~~GD~Il~VNG~~v~~~~h~evv~~lk 77 (113)
T 3soe_A 12 LLVTIPLIKGPKGFGFAIADSP-----------TGQKVKMILD--SQWCQG-LQKGDIIKEIYHQNVQNLTHLQVVEVLK 77 (113)
T ss_dssp EEEEEEEECBTTBSSEEEEEET-----------TEEEEEEESC--GGGSTT-CCTTCEEEEETTEECTTSCHHHHHHHHH
T ss_pred CEEEEEEEECCCcccEEEeCCC-----------CCcEEEEecC--hHHhCC-CCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 56789999977 9999996532 2678999987 577888 9999999999999999999999999998
Q ss_pred CC--CCeEEEEEecCCCCC
Q psy4596 238 EP--CPEILLKIQHDPHPE 254 (439)
Q Consensus 238 ~~--~~~v~l~v~r~~~~~ 254 (439)
.. +..+.|+|.|++...
T Consensus 78 ~~~~G~~v~L~V~R~g~~~ 96 (113)
T 3soe_A 78 QFPVGADVPLLILRGGPPS 96 (113)
T ss_dssp HSCTTCEEEEEEEESSCC-
T ss_pred cCCCCCEEEEEEEECCccC
Confidence 53 779999999988653
No 238
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=99.27 E-value=4.2e-11 Score=94.21 Aligned_cols=89 Identities=28% Similarity=0.433 Sum_probs=73.3
Q ss_pred eeEEEEEecCC-CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHh
Q psy4596 159 FLQDVVLPKSG-PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALL 237 (439)
Q Consensus 159 ~~~~v~l~~~~-~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~ 237 (439)
+..++.+.+.. +|||++.+..+... ....|++|..|.++|+|+++|+|++||+|++|||.++.++++.++...++
T Consensus 4 ~~~~v~l~~~~~~lG~~i~~~~~~~~----~~~~~~~V~~v~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~ 79 (97)
T 2iwn_A 4 ETFDVELTKNVQGLGITIAGYIGDKK----LEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLR 79 (97)
T ss_dssp EEEEEEEECBTTBSCEEEECCCCC--------CCCCEEEEECTTCHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHH
T ss_pred EEEEEEEecCCCCCcEEEEccCCCCC----CCCCCEEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 45667777765 89999998643211 12348999999999999999999999999999999999999999998888
Q ss_pred CCCCeEEEEEecCC
Q psy4596 238 EPCPEILLKIQHDP 251 (439)
Q Consensus 238 ~~~~~v~l~v~r~~ 251 (439)
..+..+.|+|.|++
T Consensus 80 ~~~~~v~l~v~r~g 93 (97)
T 2iwn_A 80 HTGQTVLLTLMRRG 93 (97)
T ss_dssp TCCSEEEEEEEEEE
T ss_pred cCCCeEEEEEEeCC
Confidence 88889999998865
No 239
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.27 E-value=5.4e-11 Score=95.99 Aligned_cols=83 Identities=41% Similarity=0.740 Sum_probs=70.3
Q ss_pred ccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCeEE
Q psy4596 264 QEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRYSGHQIS 343 (439)
Q Consensus 264 ~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~ 343 (439)
....+|||.+.++.... +......+++|..|.++|||+++| |++||+|++|||+++.++++.+++..++..+..+.
T Consensus 23 ~~~~glG~~i~~g~~~~---~~~~~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~ 98 (110)
T 1x5q_A 23 RQTGGLGISIAGGKGST---PYKGDDEGIFISRVSEEGPAARAG-VRVGDKLLEVNGVALQGAEHHEAVEALRGAGTAVQ 98 (110)
T ss_dssp CSSSSCSEEEEECTTSC---CSSTTCCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHSCCSEEE
T ss_pred cCCCeeeEEEEccccCC---ccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHhhCCCCeEE
Confidence 34678999998765321 112235689999999999999999 99999999999999999999999999998899999
Q ss_pred EEEecCC
Q psy4596 344 LTVCKGF 350 (439)
Q Consensus 344 l~v~r~~ 350 (439)
|+|.|..
T Consensus 99 l~v~R~g 105 (110)
T 1x5q_A 99 MRVWRES 105 (110)
T ss_dssp EEEEECS
T ss_pred EEEEECC
Confidence 9999864
No 240
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=99.26 E-value=2e-11 Score=97.82 Aligned_cols=82 Identities=28% Similarity=0.345 Sum_probs=71.0
Q ss_pred EEEEEecCC--CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHhC
Q psy4596 161 QDVVLPKSG--PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALLE 238 (439)
Q Consensus 161 ~~v~l~~~~--~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~ 238 (439)
+.|.|.+.. .|||.+....+ ..|++|..|.++|||+++| |++||+|++|||.++.++++.++...++.
T Consensus 3 r~v~l~~~~~~~~G~~l~~~~~---------~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~ 72 (106)
T 3ngh_A 3 RESKLSKQEGQNYGFFLRIEKD---------TDGHLIRVIEEGSPAEKAG-LLDGDRVLRINGVFVDKEEHAQVVELVRK 72 (106)
T ss_dssp EEEEEECCTTCCCCCEEECCTT---------CCSCEEECCCTTSHHHHTT-CCTTCEEEEETTEECTTSCHHHHHHHHHH
T ss_pred EEEEEEeCCCCeeCEEEEEEeC---------CCCEEEEEeCCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 567777754 89999887533 3479999999999999999 99999999999999999999999998888
Q ss_pred CCCeEEEEEecCCC
Q psy4596 239 PCPEILLKIQHDPH 252 (439)
Q Consensus 239 ~~~~v~l~v~r~~~ 252 (439)
.+..+.|+|.|++.
T Consensus 73 ~g~~v~l~v~r~~~ 86 (106)
T 3ngh_A 73 SGNSVTLLVLDGDS 86 (106)
T ss_dssp TTTEEEEEEECHHH
T ss_pred CCCEEEEEEEECCe
Confidence 88899999998753
No 241
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.26 E-value=1.9e-11 Score=96.93 Aligned_cols=73 Identities=23% Similarity=0.272 Sum_probs=64.2
Q ss_pred ccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCeEE
Q psy4596 264 QEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRYSGHQIS 343 (439)
Q Consensus 264 ~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~ 343 (439)
....+|||.+... .+++|..|.++|||+++| |++||+|++|||+++.++++.+++.+|+..+..+.
T Consensus 23 ~~~~g~G~~~~~~-------------~~~~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~ 88 (100)
T 1whd_A 23 RGKDGFGFTICCD-------------SPVRVQAVDSGGPAERAG-LQQLDTVLQLNERPVEHWKCVELAHEIRSCPSEII 88 (100)
T ss_dssp CCSSSSSCBCCCS-------------SSCBCCBCCTTSHHHHHT-CCSSCEEEEETTEECTTCCHHHHHHHHHHCSSEEE
T ss_pred CCCCeeeEEEeCC-------------CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEE
Confidence 3346788887653 379999999999999999 99999999999999999999999999998888899
Q ss_pred EEEecCC
Q psy4596 344 LTVCKGF 350 (439)
Q Consensus 344 l~v~r~~ 350 (439)
|+|.|..
T Consensus 89 l~v~R~~ 95 (100)
T 1whd_A 89 LLVWRVS 95 (100)
T ss_dssp EEEEECC
T ss_pred EEEEECC
Confidence 9998864
No 242
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=99.26 E-value=2.9e-11 Score=95.39 Aligned_cols=83 Identities=30% Similarity=0.414 Sum_probs=68.9
Q ss_pred eeEEEEEecCC-CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHh
Q psy4596 159 FLQDVVLPKSG-PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALL 237 (439)
Q Consensus 159 ~~~~v~l~~~~-~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~ 237 (439)
..+.+.+.+.. +|||++....+ ..|++|..|.++|||+++| |++||+|++|||.++.++++.++...+.
T Consensus 9 ~~~~~~l~~~~~g~G~~~~~~~~---------~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~ 78 (98)
T 2jxo_A 9 RPRLCTMKKGPSGYGFNLHSDKS---------KPGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIR 78 (98)
T ss_dssp CCEEEEEECTTTCCCEEEECCCS---------SSCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred CcEEEEEEeCCCcccEEEEecCC---------CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 34667888876 99999987543 2379999999999999999 9999999999999999888999999888
Q ss_pred CCC-CeEEEEEecCC
Q psy4596 238 EPC-PEILLKIQHDP 251 (439)
Q Consensus 238 ~~~-~~v~l~v~r~~ 251 (439)
... ..+.|+|.|++
T Consensus 79 ~~~~~~~~l~v~R~g 93 (98)
T 2jxo_A 79 AGGDETKLLVVDRET 93 (98)
T ss_dssp TTTTEEEEEECCHHH
T ss_pred hCCCcEEEEEEECCc
Confidence 654 34567777754
No 243
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=99.26 E-value=2e-11 Score=99.28 Aligned_cols=83 Identities=31% Similarity=0.518 Sum_probs=70.9
Q ss_pred ceeeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHh
Q psy4596 257 QEITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLR 336 (439)
Q Consensus 257 ~~v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~ 336 (439)
..+.+.+.....|||.+.... ...|++|..|.++|||+++| |++||+|++|||+++.++++.+++..|+
T Consensus 15 ~~~~l~~~~~~~~G~~l~~~~----------~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~ 83 (114)
T 2edz_A 15 RECKLSKQEGQNYGFFLRIEK----------DTDGHLIRVIEEGSPAEKAG-LLDGDRVLRINGVFVDKEEHAQVVELVR 83 (114)
T ss_dssp EEEEEECCTTCCCSCEEECCT----------TCCSCEEECCCTTCTTGGGT-CCTTCEEEEESSSBCSSSCHHHHHHHHH
T ss_pred EEEEEeCCCCCcccEEEEEec----------CCCCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 345555566677899887542 13489999999999999999 9999999999999999999999999999
Q ss_pred cCCCeEEEEEecCC
Q psy4596 337 YSGHQISLTVCKGF 350 (439)
Q Consensus 337 ~~~~~v~l~v~r~~ 350 (439)
..+..+.|+|.|..
T Consensus 84 ~~g~~v~l~v~R~~ 97 (114)
T 2edz_A 84 KSGNSVTLLVLDGD 97 (114)
T ss_dssp HTCSEEEEEEECHH
T ss_pred cCCCEEEEEEEECC
Confidence 88999999998864
No 244
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=99.26 E-value=3.9e-11 Score=96.35 Aligned_cols=80 Identities=23% Similarity=0.279 Sum_probs=68.2
Q ss_pred eEEEEEecCC-CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHhC
Q psy4596 160 LQDVVLPKSG-PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALLE 238 (439)
Q Consensus 160 ~~~v~l~~~~-~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~ 238 (439)
.+.|.|.|.. +|||.+.+. .+++|..|.++|||+++| |++||+|++|||.++.++++.++...++.
T Consensus 24 ~r~v~l~k~~~~~G~~l~~~------------~~v~V~~V~~gspA~~AG-L~~GD~Il~VnG~~v~~~~~~dv~~~i~~ 90 (109)
T 2vsv_A 24 PRSIRFTAEEGDLGFTLRGN------------APVQVHFLDPYCSASVAG-AREGDYIVSIQLVDCKWLTLSEVMKLLKS 90 (109)
T ss_dssp CEEEEECCGGGCCCEEEESS------------SSCEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHT
T ss_pred CEEEEEEeCCCceeEEEeCC------------CCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 4778898865 999998642 258999999999999999 99999999999999999999999988887
Q ss_pred CCC-eEEEEEecCCC
Q psy4596 239 PCP-EILLKIQHDPH 252 (439)
Q Consensus 239 ~~~-~v~l~v~r~~~ 252 (439)
.+. .+.|+|.|...
T Consensus 91 ~~~~~v~l~V~~~~~ 105 (109)
T 2vsv_A 91 FGEDEIEMKVVSLLD 105 (109)
T ss_dssp TTTSCEEEEEESCC-
T ss_pred CCCCeEEEEEEECCC
Confidence 655 48999987643
No 245
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.26 E-value=3.4e-11 Score=93.32 Aligned_cols=71 Identities=28% Similarity=0.535 Sum_probs=62.1
Q ss_pred eeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCe
Q psy4596 262 IRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRYSGHQ 341 (439)
Q Consensus 262 ~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~ 341 (439)
.......|||.+.+ | +|.+|.++|||+++| |++||+|++|||+++.++++.++.++|+..+..
T Consensus 19 ~~~~~~~lG~~~~~---------------G-~V~~V~~~spA~~aG-L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~g~~ 81 (90)
T 1y7n_A 19 RPDLRYQLGFSVQN---------------G-IICSLMRGGIAERGG-VRVGHRIIEINGQSVVATPHEKIVHILSNAVGE 81 (90)
T ss_dssp ESSTTSCCCEEEET---------------T-EEEEECTTSHHHHHT-CCSSCEEEEETTEECTTSCHHHHHHHHHHCCEE
T ss_pred eCCCccccCeEecC---------------C-EEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 33445678988742 4 899999999999999 999999999999999999999999999988899
Q ss_pred EEEEEecC
Q psy4596 342 ISLTVCKG 349 (439)
Q Consensus 342 v~l~v~r~ 349 (439)
+.|+|.+.
T Consensus 82 v~l~v~p~ 89 (90)
T 1y7n_A 82 IHMKTMPA 89 (90)
T ss_dssp EEEEEECC
T ss_pred EEEEEEEC
Confidence 99998753
No 246
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=99.26 E-value=3e-11 Score=96.42 Aligned_cols=82 Identities=30% Similarity=0.566 Sum_probs=66.4
Q ss_pred cccceeecCCccCCCC---CCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhc-CCCeE
Q psy4596 267 EKLGMHIKGGLRGQRG---NPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRY-SGHQI 342 (439)
Q Consensus 267 ~~lG~~i~~~~~~~~g---~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~-~~~~v 342 (439)
..|||++.++...... ........|++|..|.++|||+++| |++||+|++|||.++.+++|++++..|+. .+..+
T Consensus 19 ~~lG~~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g~~v 97 (104)
T 3sfj_A 19 LILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAG-LQIGDKIMQVNGWDMTMVTHDQARKRLTKRSEEVV 97 (104)
T ss_dssp EECSEEEEECTTSCGGGCSSCSSTTCCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHTCTTCSEE
T ss_pred CcccEEEECccccCccccccccCCCCCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCEE
Confidence 3699999965542111 0111335689999999999999999 99999999999999999999999999986 56899
Q ss_pred EEEEecC
Q psy4596 343 SLTVCKG 349 (439)
Q Consensus 343 ~l~v~r~ 349 (439)
.|+|.|+
T Consensus 98 ~l~v~R~ 104 (104)
T 3sfj_A 98 RLLVTRQ 104 (104)
T ss_dssp EEEEEEC
T ss_pred EEEEEcC
Confidence 9999874
No 247
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=99.26 E-value=4.2e-11 Score=92.52 Aligned_cols=70 Identities=23% Similarity=0.361 Sum_probs=62.3
Q ss_pred CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHhCCCCeEEEEEec
Q psy4596 170 PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALLEPCPEILLKIQH 249 (439)
Q Consensus 170 ~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l~v~r 249 (439)
.|||.+.+ |++|..|.++|+|+++|+|++||+|++|||.++.+++|.++...++..+..+.|++.+
T Consensus 14 ~~G~~~~~--------------gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~i~~~~~~v~L~v~~ 79 (88)
T 3e17_A 14 EYGLRLGS--------------QIFVKEMTRTGLATKDGNLHEGDIILKINGTVTENMSLTDARKLIEKSRGKLQLVVLR 79 (88)
T ss_dssp CCCEEEEE--------------EEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHTTTEEEEEECC
T ss_pred CCCEEEeC--------------CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEeC
Confidence 78998865 5999999999999999999999999999999999999999999999888899999987
Q ss_pred CCCC
Q psy4596 250 DPHP 253 (439)
Q Consensus 250 ~~~~ 253 (439)
....
T Consensus 80 ~~~~ 83 (88)
T 3e17_A 80 DLEH 83 (88)
T ss_dssp C---
T ss_pred CCcc
Confidence 6543
No 248
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=99.25 E-value=4.7e-11 Score=96.48 Aligned_cols=82 Identities=37% Similarity=0.513 Sum_probs=68.9
Q ss_pred eccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcC--CC
Q psy4596 263 RQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRYS--GH 340 (439)
Q Consensus 263 ~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~--~~ 340 (439)
.....+|||++.+..... ....+++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+|+.. +.
T Consensus 18 ~~~~~glG~~~~~~~~~~------~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~g~ 91 (111)
T 2koj_A 18 KKGTEGLGFSITSRDVTI------GGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLAGKSQEEVVSLLRSTKMEG 91 (111)
T ss_dssp ECBTTBTCEEEEECSCSS------SSSSCEEEEEECSSSHHHHHCSSCTTCEEEEETTEECTTSCHHHHHHHHHHCCCSS
T ss_pred EECCCccCEEEEeccCCC------CCCcCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCC
Confidence 344568999998754221 1135899999999999999999999999999999999999999999999975 78
Q ss_pred eEEEEEecCC
Q psy4596 341 QISLTVCKGF 350 (439)
Q Consensus 341 ~v~l~v~r~~ 350 (439)
.+.|+|.|..
T Consensus 92 ~v~l~v~R~~ 101 (111)
T 2koj_A 92 TVSLLVFRQE 101 (111)
T ss_dssp EEEEEEEECC
T ss_pred eEEEEEEeCC
Confidence 9999998864
No 249
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.25 E-value=1.9e-11 Score=100.16 Aligned_cols=85 Identities=31% Similarity=0.588 Sum_probs=72.6
Q ss_pred eeEEEEEecCC--CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhc--CCCCCCCEEEEECCeeCCCCCHHHHHH
Q psy4596 159 FLQDVVLPKSG--PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALS--GKLRMGDRILAVNGRDVSKVTHEEAVL 234 (439)
Q Consensus 159 ~~~~v~l~~~~--~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~--G~L~~GD~Il~VNg~~v~~~~~~~~~~ 234 (439)
..+.|.|.|.. .|||++.++.+. ..|++|..|.++|||+++ | |++||+|++|||.++.+++|.+++.
T Consensus 15 ~~~~v~l~k~~~~~~G~~l~gg~~~--------~~~v~V~~V~~~spA~~a~gG-L~~GD~Il~ing~~v~~~~~~~~~~ 85 (119)
T 2cs5_A 15 NLVLIRMKPDENGRFGFNVKGGYDQ--------KMPVIVSRVAPGTPADLCVPR-LNEGDQVVLINGRDIAEHTHDQVVL 85 (119)
T ss_dssp CCEEEEECCCSSSCCSEEEEEEGGG--------TEEEEEEEECSSSTTTSSSSC-CCTTCEEEEETTBCTTSSCHHHHHH
T ss_pred CeEEEEEEeCCCCCcCEEEecccCC--------CCCeEEEEECCCCHHHHhhcC-CCCCCEEEEECCEECCCCCHHHHHH
Confidence 46778888855 699999987652 237999999999999999 8 9999999999999999999999998
Q ss_pred HHhCCC----CeEEEEEecCCC
Q psy4596 235 ALLEPC----PEILLKIQHDPH 252 (439)
Q Consensus 235 ~l~~~~----~~v~l~v~r~~~ 252 (439)
.++..+ ..+.|+|.|+..
T Consensus 86 ~~~~~~~~~~~~v~l~v~R~~~ 107 (119)
T 2cs5_A 86 FIKASCERHSGELMLLVRPNAV 107 (119)
T ss_dssp HHHHHHHCCSSCEEEEEECCCC
T ss_pred HHHhccccCCCEEEEEEEcccc
Confidence 887653 589999998754
No 250
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=99.25 E-value=7.8e-11 Score=93.51 Aligned_cols=87 Identities=29% Similarity=0.409 Sum_probs=70.5
Q ss_pred eeEEEEEecCC--CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHH
Q psy4596 159 FLQDVVLPKSG--PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLAL 236 (439)
Q Consensus 159 ~~~~v~l~~~~--~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l 236 (439)
..+.|.+.+.. +|||++...... ....+++|..|.++|+|+++|.|++||+|++|||.++.+.++.++...|
T Consensus 9 ~~~~v~l~k~~g~~lG~~i~~~~~~------~~~~~~~V~~V~~~spA~~~ggl~~GD~I~~Ing~~v~~~~~~~~~~~l 82 (101)
T 2yt7_A 9 NCREVHLEKRRGEGLGVALVESGWG------SLLPTAVIANLLHGGPAERSGALSIGDRLTAINGTSLVGLPLAACQAAV 82 (101)
T ss_dssp CCEEEEEECCTTCCCCEEEEECCCS------SSSCCEEEEEECTTSTTGGGSSCCTTCEEEEESSCBCTTSCHHHHHHHH
T ss_pred ceEEEEEEeCCCCccCEEEEeCCCC------CCccCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 45778887643 899999753211 1234799999999999999444999999999999999888999999999
Q ss_pred hC--CCCeEEEEEecCC
Q psy4596 237 LE--PCPEILLKIQHDP 251 (439)
Q Consensus 237 ~~--~~~~v~l~v~r~~ 251 (439)
+. .+..+.|+|.|.+
T Consensus 83 ~~~~~g~~v~l~v~R~~ 99 (101)
T 2yt7_A 83 RETKSQTSVTLSIVHCP 99 (101)
T ss_dssp HHTTTSSEEEEEECCCC
T ss_pred HhCCCCCeEEEEEEeCC
Confidence 86 6789999999875
No 251
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=99.25 E-value=9.1e-12 Score=115.54 Aligned_cols=87 Identities=37% Similarity=0.517 Sum_probs=74.5
Q ss_pred ceeeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhh-cCCCCCCCEEEEECCEEcCCCCHHHHHHHH
Q psy4596 257 QEITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKR-DGRLKVGMRLLEVNGMSLLGASHQEAVNTL 335 (439)
Q Consensus 257 ~~v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~-~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l 335 (439)
..+.+.+....+|||+|.++.. ...++||..|.++|||++ +| |++||+|++|||++|.+++|.+++.+|
T Consensus 79 r~V~L~k~~~~glGf~I~gg~d---------~~~gi~V~~V~~gspA~~~aG-L~~GD~Il~VNG~~v~~~t~~e~v~~l 148 (263)
T 1z87_A 79 RRVTVRKADAGGLGISIKGGRE---------NKMPILISKIFKGLAADQTEA-LFVGDAILSVNGEDLSSATHDEAVQAL 148 (263)
T ss_dssp EEECCCTTTTCCCCCEEEEETT---------TTEEEEEEECCTTSHHHHCTT-CCSSCEEEEESSCBCTTSCHHHHHHHH
T ss_pred EEEEEEeCCCCCEeEEEeeccC---------CCCCEEEEEECCCCHHHHhCC-CCCCCEEEEECCEECCCcCHHHHHHHH
Confidence 4556666666889999988642 134899999999999999 57 999999999999999999999999999
Q ss_pred hcCCCeEEEEEecCCccC
Q psy4596 336 RYSGHQISLTVCKGFERG 353 (439)
Q Consensus 336 ~~~~~~v~l~v~r~~~~~ 353 (439)
+..+..|.|+|.|.....
T Consensus 149 ~~~g~~V~L~V~R~~~~~ 166 (263)
T 1z87_A 149 KKTGKEVVLEVKYMKEVS 166 (263)
T ss_dssp HHCCSCCCEEEECCSSSS
T ss_pred hcCCCeEEEEEEeCcccc
Confidence 999999999999975443
No 252
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=99.25 E-value=2e-11 Score=96.60 Aligned_cols=84 Identities=27% Similarity=0.389 Sum_probs=67.6
Q ss_pred ccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCeEE
Q psy4596 264 QEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRYSGHQIS 343 (439)
Q Consensus 264 ~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~ 343 (439)
+....|||++.+... ..+.. ..+..|++|..|.++|||+++| |++||+|++|||+++.++++.+++.+|+..+..+.
T Consensus 10 ~~~~~~Gf~l~~~~~-~~~~~-~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~ 86 (99)
T 3khf_A 10 SSGKKYGFSLRAIRV-YMGDS-DVYTVHHVVWSVEDGSPAQEAG-LRAGDLITHINGESVLGLVHMDVVELLLKSGNKIS 86 (99)
T ss_dssp C-CCCCCEEEEEEEE-ESSSS-SCEEEEEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHHSCSEEE
T ss_pred eCCCCCcEEEEeccc-ccCcc-ccccCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcCCCEEE
Confidence 456789999986432 11110 0112367899999999999999 99999999999999999999999999999999999
Q ss_pred EEEecCC
Q psy4596 344 LTVCKGF 350 (439)
Q Consensus 344 l~v~r~~ 350 (439)
|++.|..
T Consensus 87 l~v~r~~ 93 (99)
T 3khf_A 87 LRTTALE 93 (99)
T ss_dssp EEEECSC
T ss_pred EEEEECC
Confidence 9999853
No 253
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.25 E-value=1.9e-11 Score=99.67 Aligned_cols=87 Identities=36% Similarity=0.515 Sum_probs=74.6
Q ss_pred eEEEEEecCC-CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHhC
Q psy4596 160 LQDVVLPKSG-PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALLE 238 (439)
Q Consensus 160 ~~~v~l~~~~-~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~ 238 (439)
.+.+.+.+.. +|||++.++.+.. ..+++|..|.++|+|+++|+|++||+|++|||.++.++++.++...++.
T Consensus 18 ~~~v~l~~~~~glG~~l~~~~~~~-------~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~ 90 (116)
T 2dm8_A 18 EMIIEISKGRSGLGLSIVGGKDTP-------LNAIVIHEVYEEGAAARDGRLWAGDQILEVNGVDLRNSSHEEAITALRQ 90 (116)
T ss_dssp CEEEEEECCSSCCCCCCBCCTTSS-------CSSEECCCCCSSSHHHHHTCCCTTCEEEEETTEECSSSCHHHHHHHHHT
T ss_pred EEEEEEEECCCcccEEEeCCCCCC-------cCCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 4667887765 9999998765431 1479999999999999999999999999999999999899999988887
Q ss_pred CCCeEEEEEecCCCC
Q psy4596 239 PCPEILLKIQHDPHP 253 (439)
Q Consensus 239 ~~~~v~l~v~r~~~~ 253 (439)
.+..+.|+|.|++..
T Consensus 91 ~~~~v~l~v~R~~~~ 105 (116)
T 2dm8_A 91 TPQKVRLVVYRDEAH 105 (116)
T ss_dssp CCSEEEEEEECCSSC
T ss_pred CCCeEEEEEEeCCcc
Confidence 778899999997654
No 254
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.25 E-value=6.1e-12 Score=100.29 Aligned_cols=87 Identities=25% Similarity=0.451 Sum_probs=73.6
Q ss_pred eeEEEEEecCC-CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHh
Q psy4596 159 FLQDVVLPKSG-PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALL 237 (439)
Q Consensus 159 ~~~~v~l~~~~-~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~ 237 (439)
....+.+.+.. +|||++.++.+. ..+++|..|.++|||+++|+|++||+|++|||.++.++++.++...++
T Consensus 11 ~~~~v~l~~~~~g~G~~~~~~~~~--------~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~ 82 (103)
T 1wfv_A 11 DYFTVDMEKGAKGFGFSIRGGREY--------KMDLYVLRLAEDGPAIRNGRMRVGDQIIEINGESTRDMTHARAIELIK 82 (103)
T ss_dssp CCEECCEECCTTSSSBCCEEETTT--------TEEEECCCBCTTSHHHHHCSSCTTCEEEEETTEECSSCCHHHHHHHHH
T ss_pred eEEEEEEecCCCcCCEEEeccccC--------CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 44567777665 899999876542 237999999999999999999999999999999999999999998887
Q ss_pred CCCCeEEEEEecCCCC
Q psy4596 238 EPCPEILLKIQHDPHP 253 (439)
Q Consensus 238 ~~~~~v~l~v~r~~~~ 253 (439)
..+..+.|+|.|++..
T Consensus 83 ~~g~~v~l~v~R~~~~ 98 (103)
T 1wfv_A 83 SGGRRVRLLLKRGTGS 98 (103)
T ss_dssp HHCSEECEEEECTTCS
T ss_pred cCCCeEEEEEEECCCC
Confidence 7788999999987643
No 255
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.25 E-value=8.6e-12 Score=98.91 Aligned_cols=85 Identities=32% Similarity=0.474 Sum_probs=70.0
Q ss_pred CcceeeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhc-CCCCCCCEEEEECCEEcCCCCHHHHHH
Q psy4596 255 GFQEITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRD-GRLKVGMRLLEVNGMSLLGASHQEAVN 333 (439)
Q Consensus 255 ~~~~v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~-G~L~~GD~Il~VNg~~v~~~~~~~~~~ 333 (439)
.+.++.+.......|||.+.++... ..+++|.+|.++|||+++ | |++||+|++|||+++.++ +.+++.
T Consensus 9 ~~~~~~v~~~~~~~~G~~~~gg~~~---------~~~v~V~~V~~~spA~~agG-L~~GD~I~~ing~~v~~~-~~~~~~ 77 (100)
T 2edp_A 9 SFQYVPVQLQGGAPWGFTLKGGLEH---------CEPLTVSKIEDGGKAALSQK-MRTGDELVNINGTPLYGS-RQEALI 77 (100)
T ss_dssp CCEEEEEECCSCSCCCCCEEEEGGG---------TEEEEECCCCTTSHHHHHTS-CCTTCEEEEETTEECCSC-SHHHHH
T ss_pred CcEEEEEEECCCCCcCEEEeccCCC---------CCCeEEEEECCCCHHHHcCC-CCCCCEEEEECCEEccch-HHHHHH
Confidence 3445555545556799999875421 237899999999999999 7 999999999999999987 899999
Q ss_pred HHhcCCCeEEEEEecCC
Q psy4596 334 TLRYSGHQISLTVCKGF 350 (439)
Q Consensus 334 ~l~~~~~~v~l~v~r~~ 350 (439)
+++..+..+.|+|.|..
T Consensus 78 ~~~~~~~~v~l~v~R~~ 94 (100)
T 2edp_A 78 LIKGSFRILKLIVRRRN 94 (100)
T ss_dssp HHHTCCSSCEEEEEECC
T ss_pred HHHhCCCeEEEEEEeCC
Confidence 99988899999999864
No 256
>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A
Probab=99.25 E-value=3.9e-11 Score=97.40 Aligned_cols=84 Identities=21% Similarity=0.353 Sum_probs=70.9
Q ss_pred ceeeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHh
Q psy4596 257 QEITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLR 336 (439)
Q Consensus 257 ~~v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~ 336 (439)
+++.+.+.....|||.+.++.. ...+++|..|.++|||+++|+|++||+|++|||.++.+.++.++.++|+
T Consensus 26 ~~V~l~~~~~~~lG~~l~~~~~---------~~~~~~V~~V~~gspA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~l~ 96 (114)
T 2gzv_A 26 GKVTLQKDAQNLIGISIGGGAQ---------YCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQ 96 (114)
T ss_dssp EEEEEECCTTSCCSEEEEECCC-----------CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred EEEEEEECCCCcEeEEEEeCCC---------CCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 4566666666779999987542 1247999999999999999999999999999999999999999999999
Q ss_pred cCCCeEEEEEecC
Q psy4596 337 YSGHQISLTVCKG 349 (439)
Q Consensus 337 ~~~~~v~l~v~r~ 349 (439)
..++.+.|+|.+.
T Consensus 97 ~~~~~v~l~v~~~ 109 (114)
T 2gzv_A 97 EVKGEVTIHYNKL 109 (114)
T ss_dssp HCCSEEEEEEECC
T ss_pred cCCCeEEEEEEec
Confidence 8888889988653
No 257
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.25 E-value=4e-11 Score=98.67 Aligned_cols=89 Identities=22% Similarity=0.384 Sum_probs=72.2
Q ss_pred eeeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhc
Q psy4596 258 EITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRY 337 (439)
Q Consensus 258 ~v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~ 337 (439)
++.+.+.....|||.+.++.... .....+++|..|.+++||+++|.|++||+|++|||+++.++++.++.++|+.
T Consensus 18 ~v~l~k~~~~glG~~l~~~~~~~-----~~~~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~ 92 (122)
T 1v5q_A 18 EVVLTADPVTGFGIQLQGSVFAT-----ETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRD 92 (122)
T ss_dssp EEEECCCSSSSSCEEEECCSCCS-----SSCSSCCEEEEECTTSHHHHSCCCCTTCCEEEETTEESSSSCHHHHHHHHHH
T ss_pred EEEEEeCCCCccCEEEecccccC-----CcCCCCcEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 34455555688999998753110 0123478999999999999999999999999999999999999999999998
Q ss_pred C--CCeEEEEEecCCc
Q psy4596 338 S--GHQISLTVCKGFE 351 (439)
Q Consensus 338 ~--~~~v~l~v~r~~~ 351 (439)
. +..+.|+|.|...
T Consensus 93 ~~~g~~v~l~v~R~~~ 108 (122)
T 1v5q_A 93 SSITSKVTLEIEFDVA 108 (122)
T ss_dssp HTTTTCEEEEEEEECC
T ss_pred CCCCCeEEEEEEECCc
Confidence 5 6899999998643
No 258
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.24 E-value=3.9e-11 Score=97.80 Aligned_cols=80 Identities=36% Similarity=0.564 Sum_probs=68.7
Q ss_pred ccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCeEE
Q psy4596 264 QEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRYSGHQIS 343 (439)
Q Consensus 264 ~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~ 343 (439)
....+|||.+.++... ...+++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+|+..+..+.
T Consensus 25 ~~~~glG~~l~~~~~~--------~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~ 96 (116)
T 2dm8_A 25 KGRSGLGLSIVGGKDT--------PLNAIVIHEVYEEGAAARDGRLWAGDQILEVNGVDLRNSSHEEAITALRQTPQKVR 96 (116)
T ss_dssp CCSSCCCCCCBCCTTS--------SCSSEECCCCCSSSHHHHHTCCCTTCEEEEETTEECSSSCHHHHHHHHHTCCSEEE
T ss_pred ECCCcccEEEeCCCCC--------CcCCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEE
Confidence 3456799999875421 11489999999999999999999999999999999999999999999998889999
Q ss_pred EEEecCCc
Q psy4596 344 LTVCKGFE 351 (439)
Q Consensus 344 l~v~r~~~ 351 (439)
|+|.|...
T Consensus 97 l~v~R~~~ 104 (116)
T 2dm8_A 97 LVVYRDEA 104 (116)
T ss_dssp EEEECCSS
T ss_pred EEEEeCCc
Confidence 99988643
No 259
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=99.24 E-value=8.4e-11 Score=91.23 Aligned_cols=83 Identities=23% Similarity=0.397 Sum_probs=67.5
Q ss_pred eeEEEEEecCC----CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHH
Q psy4596 159 FLQDVVLPKSG----PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVL 234 (439)
Q Consensus 159 ~~~~v~l~~~~----~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~ 234 (439)
..+.|.+.|.. +|||++...... ...|++|..|.++|||+++| |++||+|++|||+++.++++.++..
T Consensus 6 ~~~~v~i~k~~~~~~~~Gf~v~~~~~~-------~~~g~~V~~V~~~spA~~aG-L~~GD~Il~vng~~v~~~~~~~l~~ 77 (94)
T 3kzd_A 6 VTHSIHIEKSDTAADTYGFSLSSVEED-------GIRRLYVNSVKETGLASKKG-LKAGDEILEINNRAADALNSSMLKD 77 (94)
T ss_dssp EEEEEEEEC------CCSEEEEEECSS-------SSCEEEEEEECTTSHHHHTT-CCTTCEEEEETTEEGGGCCHHHHHH
T ss_pred ceeEEEEEeCCCCcCCcCEEEEecCCC-------CcCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHH
Confidence 56778888865 699999885432 13479999999999999999 9999999999999999999999998
Q ss_pred HHhCCCCeEEEEEecCC
Q psy4596 235 ALLEPCPEILLKIQHDP 251 (439)
Q Consensus 235 ~l~~~~~~v~l~v~r~~ 251 (439)
.+.+ ..+.|+|+.-|
T Consensus 78 ~l~~--~~l~ltV~~~p 92 (94)
T 3kzd_A 78 FLSQ--PSLGLLVRTYP 92 (94)
T ss_dssp HHHS--SEEEEEEEECC
T ss_pred HHhC--CeEEEEEEecC
Confidence 8863 56777776543
No 260
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=99.24 E-value=1.2e-10 Score=95.54 Aligned_cols=89 Identities=29% Similarity=0.402 Sum_probs=73.5
Q ss_pred ceeEEEEEecCC-CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHH
Q psy4596 158 LFLQDVVLPKSG-PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLAL 236 (439)
Q Consensus 158 ~~~~~v~l~~~~-~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l 236 (439)
+....+.+.+.. +|||++.+..+.. ....+++|..|.++|||+++|+|++||+|++|||.++.++++.++...+
T Consensus 29 ~~~~~v~l~~~~~~lG~~l~~~~~~~-----~g~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~l 103 (121)
T 2kom_A 29 GKRLNIQLKKGTEGLGFSITSRDVTI-----GGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLVGKSQEEVVSLL 103 (121)
T ss_dssp CEEEEEEEECCTTCCCEEEECCCCSS-----SSSCCEEEEEECTTSHHHHHTCCCSSSEEEEETTEECTTSCHHHHHHHH
T ss_pred CeEEEEEEEcCCCcEeEEEEeccCCc-----CCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHH
Confidence 356677777765 9999999865421 1135799999999999999999999999999999999988899999888
Q ss_pred hCC--CCeEEEEEecCC
Q psy4596 237 LEP--CPEILLKIQHDP 251 (439)
Q Consensus 237 ~~~--~~~v~l~v~r~~ 251 (439)
+.. +..+.|+|.|++
T Consensus 104 ~~~~~g~~v~l~v~R~g 120 (121)
T 2kom_A 104 RSTKMEGTVSLLVFRQE 120 (121)
T ss_dssp HHCCSSCEEEEEEEECC
T ss_pred hcCCCCCEEEEEEEeCC
Confidence 753 788999998865
No 261
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=99.23 E-value=6.1e-11 Score=93.54 Aligned_cols=77 Identities=25% Similarity=0.490 Sum_probs=64.1
Q ss_pred eeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCC-
Q psy4596 262 IRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRYSGH- 340 (439)
Q Consensus 262 ~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~- 340 (439)
+.....+|||.+.++. ...+++|..|.++|||+++| |++||+|++|||+++.++++.++.++|+....
T Consensus 15 l~~~~~g~G~~~~~~~----------~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~ 83 (98)
T 2jxo_A 15 MKKGPSGYGFNLHSDK----------SKPGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDE 83 (98)
T ss_dssp EECTTTCCCEEEECCC----------SSSCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTTTTE
T ss_pred EEeCCCcccEEEEecC----------CCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCc
Confidence 3344567999997753 13489999999999999999 99999999999999999889999999998654
Q ss_pred eEEEEEecC
Q psy4596 341 QISLTVCKG 349 (439)
Q Consensus 341 ~v~l~v~r~ 349 (439)
.+.|+|.|.
T Consensus 84 ~~~l~v~R~ 92 (98)
T 2jxo_A 84 TKLLVVDRE 92 (98)
T ss_dssp EEEEECCHH
T ss_pred EEEEEEECC
Confidence 556777664
No 262
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=99.23 E-value=5.6e-11 Score=95.38 Aligned_cols=88 Identities=30% Similarity=0.453 Sum_probs=71.2
Q ss_pred eeeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhc
Q psy4596 258 EITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRY 337 (439)
Q Consensus 258 ~v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~ 337 (439)
++.+.+....+|||++.++.... .......+++|..|.++|||+ +| |++||+|++|||+++.++++.+++..++.
T Consensus 10 ~v~l~k~~~~glG~~i~~~~~~~---~~~~~~~gv~V~~V~~~spA~-ag-l~~GD~I~~vng~~v~~~~~~~~~~~~~~ 84 (107)
T 2h2b_A 10 TVTLHRAPGFGFGIAISGGRDNP---HFQSGETSIVISDVLKGGPAE-GQ-LQENDRVAMVNGVSMDNVEHAFAVQQLRK 84 (107)
T ss_dssp EEEEECBTTTBTCEEEEECTTSC---CTTTCCCCEEEEEECTTSTTB-TT-BCTTCEEEEETTEECTTCCHHHHHHHHHT
T ss_pred EEEEEeCCCCccCEEEecCcCCC---cccCCCCCEEEEEECCCCchh-hC-CCCCCEEEEECCEECCCccHHHHHHHhhC
Confidence 45555665688999998754211 011124589999999999999 88 99999999999999999999999988888
Q ss_pred CCCeEEEEEecCC
Q psy4596 338 SGHQISLTVCKGF 350 (439)
Q Consensus 338 ~~~~v~l~v~r~~ 350 (439)
.+..+.|+|.|..
T Consensus 85 ~g~~v~l~v~R~~ 97 (107)
T 2h2b_A 85 SGKNAKITIRRKK 97 (107)
T ss_dssp CCSEEEEEEEEES
T ss_pred CCCEEEEEEEECC
Confidence 8899999998854
No 263
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.23 E-value=2.6e-11 Score=96.08 Aligned_cols=84 Identities=21% Similarity=0.263 Sum_probs=71.5
Q ss_pred CceeEEEEEecCC-CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHH
Q psy4596 157 SLFLQDVVLPKSG-PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLA 235 (439)
Q Consensus 157 ~~~~~~v~l~~~~-~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~ 235 (439)
.+....+.+.+.. +|||.+... .+++|..|.++|||+++| |++||+|++|||.++.++++.++...
T Consensus 13 ~~~~~~v~l~~~~~g~G~~~~~~------------~~~~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~ 79 (100)
T 1whd_A 13 NGEKLQITIRRGKDGFGFTICCD------------SPVRVQAVDSGGPAERAG-LQQLDTVLQLNERPVEHWKCVELAHE 79 (100)
T ss_dssp CCEEEEEEEECCSSSSSCBCCCS------------SSCBCCBCCTTSHHHHHT-CCSSCEEEEETTEECTTCCHHHHHHH
T ss_pred ccceEEEEEECCCCeeeEEEeCC------------CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHH
Confidence 4466778888765 899887652 258999999999999999 99999999999999999999999988
Q ss_pred HhCCCCeEEEEEecCCCC
Q psy4596 236 LLEPCPEILLKIQHDPHP 253 (439)
Q Consensus 236 l~~~~~~v~l~v~r~~~~ 253 (439)
++..+..+.|+|.|+..+
T Consensus 80 l~~~~~~v~l~v~R~~~~ 97 (100)
T 1whd_A 80 IRSCPSEIILLVWRVSGP 97 (100)
T ss_dssp HHHCSSEEEEEEEECCSS
T ss_pred HHcCCCeEEEEEEECCCC
Confidence 887777799999987654
No 264
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.23 E-value=1.7e-11 Score=97.10 Aligned_cols=84 Identities=29% Similarity=0.460 Sum_probs=68.7
Q ss_pred eeEEEEEecCCCccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhc-CCCCCCCEEEEECCeeCCCCCHHHHHHHHh
Q psy4596 159 FLQDVVLPKSGPLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALS-GKLRMGDRILAVNGRDVSKVTHEEAVLALL 237 (439)
Q Consensus 159 ~~~~v~l~~~~~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~-G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~ 237 (439)
....+.+....+|||++.++.+. ..+++|..|.++|||+++ | |++||+|++|||+++.++ +.+++..++
T Consensus 11 ~~~~v~~~~~~~~G~~~~gg~~~--------~~~v~V~~V~~~spA~~agG-L~~GD~I~~ing~~v~~~-~~~~~~~~~ 80 (100)
T 2edp_A 11 QYVPVQLQGGAPWGFTLKGGLEH--------CEPLTVSKIEDGGKAALSQK-MRTGDELVNINGTPLYGS-RQEALILIK 80 (100)
T ss_dssp EEEEEECCSCSCCCCCEEEEGGG--------TEEEEECCCCTTSHHHHHTS-CCTTCEEEEETTEECCSC-SHHHHHHHH
T ss_pred EEEEEEECCCCCcCEEEeccCCC--------CCCeEEEEECCCCHHHHcCC-CCCCCEEEEECCEEccch-HHHHHHHHH
Confidence 33444454445999999886542 236899999999999999 8 999999999999999986 788888888
Q ss_pred CCCCeEEEEEecCCC
Q psy4596 238 EPCPEILLKIQHDPH 252 (439)
Q Consensus 238 ~~~~~v~l~v~r~~~ 252 (439)
..+..+.|+|.|++.
T Consensus 81 ~~~~~v~l~v~R~~~ 95 (100)
T 2edp_A 81 GSFRILKLIVRRRNS 95 (100)
T ss_dssp TCCSSCEEEEEECCC
T ss_pred hCCCeEEEEEEeCCC
Confidence 778889999999864
No 265
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.23 E-value=3.5e-11 Score=93.56 Aligned_cols=79 Identities=29% Similarity=0.383 Sum_probs=66.9
Q ss_pred EEEEEecC--CCccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHhC
Q psy4596 161 QDVVLPKS--GPLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALLE 238 (439)
Q Consensus 161 ~~v~l~~~--~~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~ 238 (439)
+.|.|.|. .+|||++.+. ..+++|..|.++|||+++|.|++||+|++|||.++ +.++.++...++.
T Consensus 8 r~v~l~k~~~~~lG~~i~~~-----------~~~v~V~~V~~~spA~~ag~L~~GD~I~~ing~~v-~~~~~~~~~~l~~ 75 (91)
T 2e7k_A 8 RMVGIRKTAGEHLGVTFRVE-----------GGELVIARILHGGMVAQQGLLHVGDIIKEVNGQPV-GSDPRALQELLRN 75 (91)
T ss_dssp CBCCBCCCTTCCCCEEEEES-----------SSSEEEEEECSSSHHHHHCCCCTTCEEEEETTEEC-TTCHHHHHHHHHT
T ss_pred EEEEEEECCCCcEeEEEEec-----------CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEC-CCCHHHHHHHHHc
Confidence 45666653 3899999872 23799999999999999866999999999999999 7799999999988
Q ss_pred CCCeEEEEEecCC
Q psy4596 239 PCPEILLKIQHDP 251 (439)
Q Consensus 239 ~~~~v~l~v~r~~ 251 (439)
.+..+.|+|.|..
T Consensus 76 ~~~~v~l~v~~~~ 88 (91)
T 2e7k_A 76 ASGSVILKILSGP 88 (91)
T ss_dssp CCSSBCEEEECCS
T ss_pred CCCeEEEEEEECC
Confidence 7888999988753
No 266
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=99.23 E-value=1e-10 Score=96.11 Aligned_cols=82 Identities=37% Similarity=0.553 Sum_probs=68.6
Q ss_pred eeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcC--C
Q psy4596 262 IRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRYS--G 339 (439)
Q Consensus 262 ~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~--~ 339 (439)
.......|||.+.+...... ...+++|..|.++|||+++|+|++||+|++|||+++.++++.+++++|+.. +
T Consensus 36 l~~~~~~lG~~l~~~~~~~~------g~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~g 109 (121)
T 2kom_A 36 LKKGTEGLGFSITSRDVTIG------GSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLVGKSQEEVVSLLRSTKME 109 (121)
T ss_dssp EECCTTCCCEEEECCCCSSS------SSCCEEEEEECTTSHHHHHTCCCSSSEEEEETTEECTTSCHHHHHHHHHHCCSS
T ss_pred EEcCCCcEeEEEEeccCCcC------CCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCC
Confidence 33455679999987542211 135899999999999999999999999999999999999999999999974 7
Q ss_pred CeEEEEEecC
Q psy4596 340 HQISLTVCKG 349 (439)
Q Consensus 340 ~~v~l~v~r~ 349 (439)
..+.|+|.|.
T Consensus 110 ~~v~l~v~R~ 119 (121)
T 2kom_A 110 GTVSLLVFRQ 119 (121)
T ss_dssp CEEEEEEEEC
T ss_pred CEEEEEEEeC
Confidence 8999999875
No 267
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=99.23 E-value=4.4e-11 Score=106.84 Aligned_cols=79 Identities=33% Similarity=0.709 Sum_probs=69.8
Q ss_pred cccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCeEEEEE
Q psy4596 267 EKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRYSGHQISLTV 346 (439)
Q Consensus 267 ~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l~v 346 (439)
.+|||+|.|+..+ .|.+......|++|..|.++|||++ | |++||+|++|||+++.+++|.+++.+++..+..+.|+|
T Consensus 2 ~g~Gf~i~gg~~~-~~~~~~~~~~g~~V~~v~~~spA~~-g-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v 78 (195)
T 2qbw_A 2 PELGFSISGGVGG-RGNPFRPDDDGIFVTRVQPEGPASK-L-LQPGDKIIQANGYSFINIEHGQAVSLLKTFQNTVELII 78 (195)
T ss_dssp CCSSEEEEECTTS-CCCSSCTTCCSEEEEEECTTSTTTT-T-CCTTCEEEEETTEECTTCCHHHHHHHHHHCCSEEEEEE
T ss_pred CcccEEEECCcCC-CCCccccCCCCEEEEEECCCChHHh-C-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEE
Confidence 4699999997643 3444444567999999999999999 8 99999999999999999999999999999889999999
Q ss_pred ec
Q psy4596 347 CK 348 (439)
Q Consensus 347 ~r 348 (439)
.|
T Consensus 79 ~r 80 (195)
T 2qbw_A 79 VR 80 (195)
T ss_dssp EE
T ss_pred EE
Confidence 99
No 268
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.23 E-value=7.7e-11 Score=96.21 Aligned_cols=84 Identities=33% Similarity=0.602 Sum_probs=72.3
Q ss_pred eeEEEEEecCC-CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHh
Q psy4596 159 FLQDVVLPKSG-PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALL 237 (439)
Q Consensus 159 ~~~~v~l~~~~-~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~ 237 (439)
+.+.|.+.+.. .|||.+....+ .|++|..|.++|||+++| |++||+|++|||.++.++++.++...+.
T Consensus 19 ~~~~v~l~~~~~~lG~~~~~~~~----------~gv~V~~V~~~spA~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~~~ 87 (117)
T 1uit_A 19 EPRHVKVQKGSEPLGISIVSGEK----------GGIYVSKVTVGSIAHQAG-LEYGDQLLEFNGINLRSATEQQARLIIG 87 (117)
T ss_dssp CCEEEEEECSSCCCCEEEEECTT----------SCEEEEEECTTSHHHHHT-CCTTCEECEETTEETTTCCHHHHHHHTT
T ss_pred CCEEEEEEeCCCCccEEEEccCC----------CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 35678888766 99999987543 379999999999999999 9999999999999999999988886666
Q ss_pred CCCCeEEEEEecCCCC
Q psy4596 238 EPCPEILLKIQHDPHP 253 (439)
Q Consensus 238 ~~~~~v~l~v~r~~~~ 253 (439)
..+..+.|+|.|++..
T Consensus 88 ~~g~~v~l~v~r~~~~ 103 (117)
T 1uit_A 88 QQCDTITILAQYNPHV 103 (117)
T ss_dssp SCCSEEEEEECCCSCC
T ss_pred cCCCeEEEEEEECCch
Confidence 7788999999998654
No 269
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=99.22 E-value=5.6e-11 Score=98.00 Aligned_cols=75 Identities=27% Similarity=0.509 Sum_probs=65.8
Q ss_pred ccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhc--CCCe
Q psy4596 264 QEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRY--SGHQ 341 (439)
Q Consensus 264 ~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~--~~~~ 341 (439)
.....|||.+.++. ..+++|..|.++|||+++| |++||+|++|||+++.++++.+++..|++ .+..
T Consensus 36 ~~~~~lG~~l~~~~-----------~~gv~V~~V~~gspA~~aG-L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~g~~ 103 (124)
T 3tsv_A 36 RKGDSVGLRLAGGN-----------DVGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEE 103 (124)
T ss_dssp ECSSCCCEEEEECT-----------TSCEEEEEECTTCHHHHTT-CCTTEEEEEETTEECSSCCHHHHHHHHHHSCTTCE
T ss_pred CCCCceeEEEecCC-----------CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCE
Confidence 33568999997653 3489999999999999999 99999999999999999999999998884 7789
Q ss_pred EEEEEecCC
Q psy4596 342 ISLTVCKGF 350 (439)
Q Consensus 342 v~l~v~r~~ 350 (439)
+.|+|.|..
T Consensus 104 v~l~v~R~~ 112 (124)
T 3tsv_A 104 VTILAQKKK 112 (124)
T ss_dssp EEEEEEECH
T ss_pred EEEEEEECC
Confidence 999998863
No 270
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=99.22 E-value=6.6e-11 Score=96.90 Aligned_cols=83 Identities=35% Similarity=0.574 Sum_probs=70.6
Q ss_pred ceeeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHh
Q psy4596 257 QEITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLR 336 (439)
Q Consensus 257 ~~v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~ 336 (439)
.++.+.+. ..+|||.+.++.. ..+++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+++
T Consensus 16 ~~v~l~k~-~~glG~~l~~~~~----------~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~ 84 (119)
T 1tp5_A 16 RRIVIHRG-STGLGFNIVGGED----------GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALK 84 (119)
T ss_dssp EEEEEECT-TSCCCEEEEECGG----------GCCEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHHH
T ss_pred EEEEEEEC-CCCccEEEecCCC----------CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 34555444 4569999987541 248999999999999999999999999999999999999999999999
Q ss_pred cCCCeEEEEEecCC
Q psy4596 337 YSGHQISLTVCKGF 350 (439)
Q Consensus 337 ~~~~~v~l~v~r~~ 350 (439)
..+..+.|+|.|..
T Consensus 85 ~~~~~v~l~v~r~~ 98 (119)
T 1tp5_A 85 NAGQTVTIIAQYKP 98 (119)
T ss_dssp TSCSEEEEEEEECH
T ss_pred cCCCeEEEEEEECC
Confidence 98999999999863
No 271
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.22 E-value=2.9e-11 Score=98.09 Aligned_cols=84 Identities=45% Similarity=0.723 Sum_probs=74.4
Q ss_pred eeEEEEEecCC-CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHh
Q psy4596 159 FLQDVVLPKSG-PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALL 237 (439)
Q Consensus 159 ~~~~v~l~~~~-~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~ 237 (439)
..+.|.|.+.. +|||++.+..+ ..+++|..|.++|+|+++|+|++||+|++|||.++.++++.++...++
T Consensus 15 ~~~~v~l~k~~~glG~~l~~~~~---------~~gv~V~~V~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~~~ 85 (113)
T 1um7_A 15 EPRKIILHKGSTGLGFNIVGGED---------GEGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQAAAALK 85 (113)
T ss_dssp SEEEEEEECCSSCSSBCCBCCST---------TCCCBCCCBCSSSHHHHTTCCCTTCEEEEESSCBCTTCCHHHHHHHHH
T ss_pred ceEEEEEEECCCcccEEEEeccC---------CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 67889998876 89999987643 247999999999999999999999999999999999999999998888
Q ss_pred CCCCeEEEEEecCC
Q psy4596 238 EPCPEILLKIQHDP 251 (439)
Q Consensus 238 ~~~~~v~l~v~r~~ 251 (439)
..+..+.|+|.|++
T Consensus 86 ~~~~~v~l~v~r~~ 99 (113)
T 1um7_A 86 RAGQSVTIVAQYRP 99 (113)
T ss_dssp SCCSEEEEEEECCH
T ss_pred hCCCcEEEEEEECc
Confidence 88889999999875
No 272
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.22 E-value=1.9e-11 Score=100.60 Aligned_cols=76 Identities=25% Similarity=0.369 Sum_probs=66.7
Q ss_pred eccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhc--CCC
Q psy4596 263 RQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRY--SGH 340 (439)
Q Consensus 263 ~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~--~~~ 340 (439)
.....+|||.+.+. ..+++|..|.++|||+++|+|++||+|++|||+++.+.+|.+++++|+. .+.
T Consensus 34 ~k~~~glG~~i~~~------------~~~v~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~s~~d~~~~l~~~~~G~ 101 (126)
T 1wif_A 34 TVGNLGLGLVVIQN------------GPYLQISHLINKGAAASDGILQPGDVLISVGHANVLGYTLREFLKLLQNITIGT 101 (126)
T ss_dssp ECCTTCCCCCEEEE------------TTEEEECCCCTTSSGGGCSSSCTTCBEEEESSSCCTTCCHHHHHHHHTSCCSSC
T ss_pred ecCCceEeEEEEcC------------CCcEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCC
Confidence 34467789988652 2378999999999999999999999999999999999999999999997 578
Q ss_pred eEEEEEecCC
Q psy4596 341 QISLTVCKGF 350 (439)
Q Consensus 341 ~v~l~v~r~~ 350 (439)
.|.|+|.|.+
T Consensus 102 ~v~l~V~R~~ 111 (126)
T 1wif_A 102 VLQIKAYRGF 111 (126)
T ss_dssp EEEEEEESSS
T ss_pred EEEEEEEECC
Confidence 9999999974
No 273
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.21 E-value=1.8e-11 Score=96.29 Aligned_cols=77 Identities=23% Similarity=0.356 Sum_probs=65.3
Q ss_pred eeeeeccC-cccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhc
Q psy4596 259 ITLIRQEG-EKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRY 337 (439)
Q Consensus 259 v~l~~~~~-~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~ 337 (439)
+.+.+... ..|||.+.+. .+++|..|.++|||+ +| |++||+|++|||+++.++++.+++.+++.
T Consensus 12 v~l~~~~~~~~~G~~l~~~-------------~~~~V~~V~~~spA~-ag-L~~GD~Il~ing~~v~~~~~~~~~~~~~~ 76 (96)
T 2edv_A 12 VKIDKDTLLQDYGFHISES-------------LPLTVVAVTAGGSAH-GK-LFPGDQILQMNNEPAEDLSWERAVDILRE 76 (96)
T ss_dssp EEECCCSSSCSCSBCCCSS-------------SSCBCCCBCSSSSST-TT-SCTTCBEEEESSCBSTTCCHHHHHHHHHH
T ss_pred EEEEECCCCCcccEEEecC-------------CCeEEEEECCCCchh-hC-CCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 34443332 3689988652 279999999999996 88 99999999999999999999999999998
Q ss_pred CCCeEEEEEecCC
Q psy4596 338 SGHQISLTVCKGF 350 (439)
Q Consensus 338 ~~~~v~l~v~r~~ 350 (439)
.+..+.|+|.|..
T Consensus 77 ~g~~v~l~v~R~~ 89 (96)
T 2edv_A 77 AEDSLSITVVRCT 89 (96)
T ss_dssp CSSCEEEEEEECC
T ss_pred CCCeEEEEEEECC
Confidence 8999999999864
No 274
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.21 E-value=8.6e-11 Score=96.66 Aligned_cols=92 Identities=27% Similarity=0.334 Sum_probs=75.1
Q ss_pred ceeEEEEEecC--CCccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHH
Q psy4596 158 LFLQDVVLPKS--GPLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLA 235 (439)
Q Consensus 158 ~~~~~v~l~~~--~~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~ 235 (439)
.+.++|.|.+. .+|||+|.++..... ....+++|..|.+++||+++|+|++||+|++|||+++.++++.++...
T Consensus 14 ~~~~~v~l~k~~~~glG~~l~~~~~~~~----~~~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~ 89 (122)
T 1v5q_A 14 TETTEVVLTADPVTGFGIQLQGSVFATE----TLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQL 89 (122)
T ss_dssp EEEEEEEECCCSSSSSCEEEECCSCCSS----SCSSCCEEEEECTTSHHHHSCCCCTTCCEEEETTEESSSSCHHHHHHH
T ss_pred ceeEEEEEEeCCCCccCEEEecccccCC----cCCCCcEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 36778899887 399999998632111 012368999999999999999999999999999999998889999988
Q ss_pred HhCC--CCeEEEEEecCCCC
Q psy4596 236 LLEP--CPEILLKIQHDPHP 253 (439)
Q Consensus 236 l~~~--~~~v~l~v~r~~~~ 253 (439)
++.. +..+.|+|.|+...
T Consensus 90 l~~~~~g~~v~l~v~R~~~~ 109 (122)
T 1v5q_A 90 LRDSSITSKVTLEIEFDVAE 109 (122)
T ss_dssp HHHHTTTTCEEEEEEEECCC
T ss_pred HHhCCCCCeEEEEEEECCcc
Confidence 8753 77899999997643
No 275
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.21 E-value=3.9e-11 Score=95.23 Aligned_cols=87 Identities=31% Similarity=0.557 Sum_probs=69.2
Q ss_pred CCCcceeeeee-ccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHH
Q psy4596 253 PEGFQEITLIR-QEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEA 331 (439)
Q Consensus 253 ~~~~~~v~l~~-~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~ 331 (439)
+..+.++.+.+ .....|||.+.+... ...+++|..|.++|||+++| |++||+|++|||+++.++++.++
T Consensus 6 ~~~~~~v~l~~~~~~~~lG~~~~~~~~---------~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~ 75 (101)
T 1uez_A 6 SGEVRLVSLRRAKAHEGLGFSIRGGSE---------HGVGIYVSLVEPGSLAEKEG-LRVGDQILRVNDKSLARVTHAEA 75 (101)
T ss_dssp SCCCEEECCCCCCTTTCSSEEEEECTT---------TTCCEEEEEECTTSHHHHHT-CCSSCCEEEETTEECSSCCHHHH
T ss_pred CCccEEEEEEECCCCCcccEEEeCCCC---------CCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHH
Confidence 33445555544 245789999987532 23489999999999999999 99999999999999999999888
Q ss_pred HHHHhcCCCeEEEEEecCC
Q psy4596 332 VNTLRYSGHQISLTVCKGF 350 (439)
Q Consensus 332 ~~~l~~~~~~v~l~v~r~~ 350 (439)
+..++. +..+.|+|.|..
T Consensus 76 ~~~~~~-~~~v~l~v~R~g 93 (101)
T 1uez_A 76 VKALKG-SKKLVLSVYSAG 93 (101)
T ss_dssp HHHSSS-SSSCCEEECCCC
T ss_pred HHhhcC-CCeEEEEEEECC
Confidence 877765 468899998763
No 276
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=99.20 E-value=1.1e-10 Score=91.72 Aligned_cols=81 Identities=30% Similarity=0.601 Sum_probs=67.9
Q ss_pred ccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCeEE
Q psy4596 264 QEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRYSGHQIS 343 (439)
Q Consensus 264 ~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~ 343 (439)
....+|||.+.+...... ....+++|..|.++|||+++|+|++||+|++|||.++.++++.+++.+++..+..+.
T Consensus 12 ~~~~~lG~~i~~~~~~~~-----~~~~~~~V~~v~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~ 86 (97)
T 2iwn_A 12 KNVQGLGITIAGYIGDKK-----LEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVL 86 (97)
T ss_dssp CBTTBSCEEEECCCCC---------CCCCEEEEECTTCHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHTCCSEEE
T ss_pred cCCCCCcEEEEccCCCCC-----CCCCCEEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEE
Confidence 445679999987532111 124589999999999999999999999999999999999999999999998889999
Q ss_pred EEEecC
Q psy4596 344 LTVCKG 349 (439)
Q Consensus 344 l~v~r~ 349 (439)
|+|.|.
T Consensus 87 l~v~r~ 92 (97)
T 2iwn_A 87 LTLMRR 92 (97)
T ss_dssp EEEEEE
T ss_pred EEEEeC
Confidence 999875
No 277
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.20 E-value=2.3e-11 Score=100.68 Aligned_cols=61 Identities=26% Similarity=0.495 Sum_probs=57.4
Q ss_pred CCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCeEEEEEecCC
Q psy4596 289 DEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRYSGHQISLTVCKGF 350 (439)
Q Consensus 289 ~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l~v~r~~ 350 (439)
..+++|..|.++|||+++| |++||+|++|||+++.++++.+++++|+..+..+.|+|.|..
T Consensus 60 ~~gv~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~r~~ 120 (126)
T 2yuy_A 60 MDTIFVKQVKEGGPAFEAG-LCTGDRIIKVNGESVIGKTYSQVIALIQNSDTTLELSVMPKD 120 (126)
T ss_dssp CCCCCBCCCCSSSHHHHHT-CCSSCCCCEETTEECSSCCHHHHHHHHHTCTTEEEEECCCCC
T ss_pred CCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEEEEECC
Confidence 4579999999999999999 999999999999999999999999999998999999998864
No 278
>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A
Probab=99.20 E-value=1.5e-10 Score=93.95 Aligned_cols=84 Identities=30% Similarity=0.410 Sum_probs=70.6
Q ss_pred eeEEEEEecCC--CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHH
Q psy4596 159 FLQDVVLPKSG--PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLAL 236 (439)
Q Consensus 159 ~~~~v~l~~~~--~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l 236 (439)
..++|.|.+.. .|||++.++.+. ..+++|..|.++|||+++|+|++||+|++|||.++.+.++.++...+
T Consensus 24 ~~~~V~l~~~~~~~lG~~l~~~~~~--------~~~~~V~~V~~gspA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~l 95 (114)
T 2gzv_A 24 VPGKVTLQKDAQNLIGISIGGGAQY--------CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMI 95 (114)
T ss_dssp CCEEEEEECCTTSCCSEEEEECCC----------CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CCEEEEEEECCCCcEeEEEEeCCCC--------CCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 45778888765 699999986542 24799999999999999999999999999999999877999999888
Q ss_pred hCCCCeEEEEEecC
Q psy4596 237 LEPCPEILLKIQHD 250 (439)
Q Consensus 237 ~~~~~~v~l~v~r~ 250 (439)
+..+..+.|+|.+.
T Consensus 96 ~~~~~~v~l~v~~~ 109 (114)
T 2gzv_A 96 QEVKGEVTIHYNKL 109 (114)
T ss_dssp HHCCSEEEEEEECC
T ss_pred HcCCCeEEEEEEec
Confidence 86667788888654
No 279
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.20 E-value=2.8e-11 Score=96.38 Aligned_cols=77 Identities=26% Similarity=0.584 Sum_probs=67.2
Q ss_pred cCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCeEEE
Q psy4596 265 EGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRYSGHQISL 344 (439)
Q Consensus 265 ~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l 344 (439)
...+|||.+.++.. ...+++|..|.++|||+++|.|++||+|++|||+++.++++.+++.+++..+..+.|
T Consensus 20 ~~~g~G~~~~~~~~---------~~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l 90 (103)
T 1wfv_A 20 GAKGFGFSIRGGRE---------YKMDLYVLRLAEDGPAIRNGRMRVGDQIIEINGESTRDMTHARAIELIKSGGRRVRL 90 (103)
T ss_dssp CTTSSSBCCEEETT---------TTEEEECCCBCTTSHHHHHCSSCTTCEEEEETTEECSSCCHHHHHHHHHHHCSEECE
T ss_pred CCCcCCEEEecccc---------CCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEE
Confidence 34569999986531 123799999999999999999999999999999999999999999999988899999
Q ss_pred EEecCC
Q psy4596 345 TVCKGF 350 (439)
Q Consensus 345 ~v~r~~ 350 (439)
+|.|..
T Consensus 91 ~v~R~~ 96 (103)
T 1wfv_A 91 LLKRGT 96 (103)
T ss_dssp EEECTT
T ss_pred EEEECC
Confidence 998864
No 280
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=99.20 E-value=1.7e-10 Score=97.00 Aligned_cols=94 Identities=35% Similarity=0.598 Sum_probs=74.3
Q ss_pred eeEEEEEecCC-----CccEEEeeCCCCC--CCCCCC--CCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCH
Q psy4596 159 FLQDVVLPKSG-----PLGFSIIGGTDHS--CIPFGQ--HKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTH 229 (439)
Q Consensus 159 ~~~~v~l~~~~-----~lG~~i~~~~~~~--~~~~g~--~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~ 229 (439)
..+.|.|.+.+ +|||++.++.+.. ...++. ...|++|..|.++|||+++| |++||+|++|||.++.++++
T Consensus 23 ~~~~v~l~~~~~~~~~~lG~~i~~g~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~~~~ 101 (139)
T 2vz5_A 23 MVQRVEIHKLRQGENLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAG-LQIGDKIMQVNGWDMTMVTH 101 (139)
T ss_dssp EEEEEEEECEEETTEEECSEEEEECTTSCGGGCSSCSSTTCCCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCH
T ss_pred ceEEEEEEEcCCCCcccccEEEEccccCChhhhhhcccCCCCCEEEEEECCCCHHHHCC-CCCCCEEEEECCEEcCCCCH
Confidence 45667777643 7999998865421 112332 23589999999999999999 99999999999999999999
Q ss_pred HHHHHHHhC-CCCeEEEEEecCCCC
Q psy4596 230 EEAVLALLE-PCPEILLKIQHDPHP 253 (439)
Q Consensus 230 ~~~~~~l~~-~~~~v~l~v~r~~~~ 253 (439)
.++...+.. .+..+.|+|.|++..
T Consensus 102 ~~~~~~l~~~~g~~v~l~v~R~g~~ 126 (139)
T 2vz5_A 102 DQARKRLTKRSEEVVRLLVTRQSLQ 126 (139)
T ss_dssp HHHHHHHCCTTCSEEEEEEEECC--
T ss_pred HHHHHHHHhCCCCEEEEEEEECCEE
Confidence 999998886 568899999998754
No 281
>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}
Probab=99.20 E-value=5.6e-11 Score=94.87 Aligned_cols=86 Identities=24% Similarity=0.370 Sum_probs=68.2
Q ss_pred eeeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhc
Q psy4596 258 EITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRY 337 (439)
Q Consensus 258 ~v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~ 337 (439)
++.+.+.....|||.+.+....... ......+++|..|.++|||+++| |++||+|++|||+++.++++.+++++|+.
T Consensus 18 ~v~l~~~~~~~~G~~l~~~~~~~~~--~~~~~~~~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~l~~ 94 (104)
T 2z17_A 18 LVTVEKQDNETFGFEIQSYRPQNQN--ACSSEMFTLICKIQEDSPAHCAG-LQAGDVLANINGVSTEGFTYKQVVDLIRS 94 (104)
T ss_dssp EEEEECCTTSCCSEEEEECCCCCCS--SSCCSCCEEEEEECTTSHHHHHT-CCTTCBCCEETTEECTTCCHHHHHHHHHH
T ss_pred EEEEEeCCCCCccEEEEeeecccCC--cccCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHHHh
Confidence 4555555567899999873211110 01224589999999999999999 99999999999999999999999999999
Q ss_pred CCCeEEEEE
Q psy4596 338 SGHQISLTV 346 (439)
Q Consensus 338 ~~~~v~l~v 346 (439)
.+..+.|+|
T Consensus 95 ~~~~v~l~v 103 (104)
T 2z17_A 95 SGNLLTIET 103 (104)
T ss_dssp TTTEEEEEC
T ss_pred CCCcEEEEE
Confidence 877888875
No 282
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.20 E-value=1.3e-11 Score=98.41 Aligned_cols=83 Identities=35% Similarity=0.554 Sum_probs=70.9
Q ss_pred EEEEecCCCccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHhCCCC
Q psy4596 162 DVVLPKSGPLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALLEPCP 241 (439)
Q Consensus 162 ~v~l~~~~~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~ 241 (439)
++.+....+|||++.++.+. ..+++|..|.++|||+++| |++||+|++|||.++.++++.++...++..+.
T Consensus 8 ~v~~~~~~~lG~~l~~g~~~--------~~~~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~ 78 (103)
T 1v5l_A 8 NVVLPGPAPWGFRLSGGIDF--------NQPLVITRITPGSKAAAAN-LCPGDVILAIDGFGTESMTHADAQDRIKAASY 78 (103)
T ss_dssp CCEEESSSCCSBCCEEETTT--------TEEEECSCBCTTSTTGGGT-CCTTCBEEEETTEECSSCCHHHHHHHHTTCCS
T ss_pred EEEEcCCCCcCEEEeccccC--------CCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 45555556999999876542 2379999999999999999 99999999999999998889999999987788
Q ss_pred eEEEEEecCCCC
Q psy4596 242 EILLKIQHDPHP 253 (439)
Q Consensus 242 ~v~l~v~r~~~~ 253 (439)
.+.|+|.|++..
T Consensus 79 ~v~l~v~R~g~~ 90 (103)
T 1v5l_A 79 QLCLKIDRAETR 90 (103)
T ss_dssp EEECEECCCTTT
T ss_pred eEEEEEEECCeE
Confidence 999999998754
No 283
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.20 E-value=7.3e-11 Score=93.66 Aligned_cols=85 Identities=40% Similarity=0.652 Sum_probs=69.0
Q ss_pred eeEEEEEecCC---CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHH
Q psy4596 159 FLQDVVLPKSG---PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLA 235 (439)
Q Consensus 159 ~~~~v~l~~~~---~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~ 235 (439)
+.+.+.+.+.+ +|||++.+..+. ..|++|..|.++|||+++| |++||+|++|||.++.++++.+++..
T Consensus 8 ~~~~v~l~~~~~~~~lG~~~~~~~~~--------~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~ 78 (101)
T 1uez_A 8 EVRLVSLRRAKAHEGLGFSIRGGSEH--------GVGIYVSLVEPGSLAEKEG-LRVGDQILRVNDKSLARVTHAEAVKA 78 (101)
T ss_dssp CCEEECCCCCCTTTCSSEEEEECTTT--------TCCEEEEEECTTSHHHHHT-CCSSCCEEEETTEECSSCCHHHHHHH
T ss_pred ccEEEEEEECCCCCcccEEEeCCCCC--------CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHh
Confidence 45677777632 899999987542 2479999999999999999 99999999999999999998776654
Q ss_pred HhCCCCeEEEEEecCCCC
Q psy4596 236 LLEPCPEILLKIQHDPHP 253 (439)
Q Consensus 236 l~~~~~~v~l~v~r~~~~ 253 (439)
+ +.+..+.|+|.|++..
T Consensus 79 ~-~~~~~v~l~v~R~g~~ 95 (101)
T 1uez_A 79 L-KGSKKLVLSVYSAGRI 95 (101)
T ss_dssp S-SSSSSCCEEECCCCCC
T ss_pred h-cCCCeEEEEEEECCcc
Confidence 4 4456788999887643
No 284
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.19 E-value=1.7e-10 Score=94.18 Aligned_cols=81 Identities=27% Similarity=0.456 Sum_probs=68.4
Q ss_pred eeeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhc
Q psy4596 258 EITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRY 337 (439)
Q Consensus 258 ~v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~ 337 (439)
.+.+.+. ...|||.+.++. ..+++|..|.++|||+++| |++||+|++|||+++.++++.+++..++.
T Consensus 22 ~v~l~~~-~~~lG~~~~~~~-----------~~gv~V~~V~~~spA~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~~~~ 88 (117)
T 1uit_A 22 HVKVQKG-SEPLGISIVSGE-----------KGGIYVSKVTVGSIAHQAG-LEYGDQLLEFNGINLRSATEQQARLIIGQ 88 (117)
T ss_dssp EEEEECS-SCCCCEEEEECT-----------TSCEEEEEECTTSHHHHHT-CCTTCEECEETTEETTTCCHHHHHHHTTS
T ss_pred EEEEEeC-CCCccEEEEccC-----------CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 4444443 467999987653 3489999999999999999 99999999999999999999999887888
Q ss_pred CCCeEEEEEecCCc
Q psy4596 338 SGHQISLTVCKGFE 351 (439)
Q Consensus 338 ~~~~v~l~v~r~~~ 351 (439)
.+..+.|+|.|...
T Consensus 89 ~g~~v~l~v~r~~~ 102 (117)
T 1uit_A 89 QCDTITILAQYNPH 102 (117)
T ss_dssp CCSEEEEEECCCSC
T ss_pred CCCeEEEEEEECCc
Confidence 88999999988643
No 285
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.19 E-value=1.6e-11 Score=97.94 Aligned_cols=78 Identities=21% Similarity=0.379 Sum_probs=67.3
Q ss_pred ccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCeEE
Q psy4596 264 QEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRYSGHQIS 343 (439)
Q Consensus 264 ~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~ 343 (439)
.....|||.+.++.+ ...+++|..|.++|||+++| |++||+|++|||+++.++++.++.++|+..+..+.
T Consensus 12 ~~~~~lG~~l~~g~~---------~~~~~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~ 81 (103)
T 1v5l_A 12 PGPAPWGFRLSGGID---------FNQPLVITRITPGSKAAAAN-LCPGDVILAIDGFGTESMTHADAQDRIKAASYQLC 81 (103)
T ss_dssp ESSSCCSBCCEEETT---------TTEEEECSCBCTTSTTGGGT-CCTTCBEEEETTEECSSCCHHHHHHHHTTCCSEEE
T ss_pred cCCCCcCEEEecccc---------CCCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEE
Confidence 345679999876541 12378999999999999999 99999999999999999889999999998899999
Q ss_pred EEEecCCc
Q psy4596 344 LTVCKGFE 351 (439)
Q Consensus 344 l~v~r~~~ 351 (439)
|+|.|...
T Consensus 82 l~v~R~g~ 89 (103)
T 1v5l_A 82 LKIDRAET 89 (103)
T ss_dssp CEECCCTT
T ss_pred EEEEECCe
Confidence 99988643
No 286
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=99.19 E-value=1.3e-10 Score=95.78 Aligned_cols=80 Identities=36% Similarity=0.552 Sum_probs=68.2
Q ss_pred EEEEEecCCCccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHh--C
Q psy4596 161 QDVVLPKSGPLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALL--E 238 (439)
Q Consensus 161 ~~v~l~~~~~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~--~ 238 (439)
+.+.+.+...|||.+.++.+ .|++|..|.++|||+++| |++||+|++|||+++.++++.++...+. .
T Consensus 31 ~~~~~~~~~~lG~~l~~~~~----------~gv~V~~V~~gspA~~aG-L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~ 99 (124)
T 3tsv_A 31 KLVKFRKGDSVGLRLAGGND----------VGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLDLP 99 (124)
T ss_dssp EEEEEECSSCCCEEEEECTT----------SCEEEEEECTTCHHHHTT-CCTTEEEEEETTEECSSCCHHHHHHHHHHSC
T ss_pred EEEEcCCCCceeEEEecCCC----------CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhcC
Confidence 34455555699999987543 379999999999999999 9999999999999999998899988777 4
Q ss_pred CCCeEEEEEecCC
Q psy4596 239 PCPEILLKIQHDP 251 (439)
Q Consensus 239 ~~~~v~l~v~r~~ 251 (439)
.+..+.|+|.|++
T Consensus 100 ~g~~v~l~v~R~~ 112 (124)
T 3tsv_A 100 KGEEVTILAQKKK 112 (124)
T ss_dssp TTCEEEEEEEECH
T ss_pred CCCEEEEEEEECC
Confidence 6888999999875
No 287
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=99.19 E-value=2.2e-10 Score=91.30 Aligned_cols=80 Identities=38% Similarity=0.668 Sum_probs=65.2
Q ss_pred CccEEEeeCCCCCC--CCCC--CCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHhC-CCCeEE
Q psy4596 170 PLGFSIIGGTDHSC--IPFG--QHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALLE-PCPEIL 244 (439)
Q Consensus 170 ~lG~~i~~~~~~~~--~~~g--~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~-~~~~v~ 244 (439)
+|||++.++.+... .+|+ ....|++|..|.++|||+++| |++||+|++|||.++.+++|.++...++. .+..+.
T Consensus 20 ~lG~~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g~~v~ 98 (104)
T 3sfj_A 20 ILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAG-LQIGDKIMQVNGWDMTMVTHDQARKRLTKRSEEVVR 98 (104)
T ss_dssp ECSEEEEECTTSCGGGCSSCSSTTCCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHTCTTCSEEE
T ss_pred cccEEEECccccCccccccccCCCCCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCEEE
Confidence 69999997765311 1221 124589999999999999999 99999999999999999999999988875 467889
Q ss_pred EEEecC
Q psy4596 245 LKIQHD 250 (439)
Q Consensus 245 l~v~r~ 250 (439)
|+|.|.
T Consensus 99 l~v~R~ 104 (104)
T 3sfj_A 99 LLVTRQ 104 (104)
T ss_dssp EEEEEC
T ss_pred EEEEcC
Confidence 988873
No 288
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.19 E-value=1.2e-10 Score=95.76 Aligned_cols=81 Identities=26% Similarity=0.306 Sum_probs=70.4
Q ss_pred eeEEEEEecCC-CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHh
Q psy4596 159 FLQDVVLPKSG-PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALL 237 (439)
Q Consensus 159 ~~~~v~l~~~~-~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~ 237 (439)
....+.|.+.. +|||++.+. ..+++|..|.++|||+++|+|++||+|++|||.++.+.+|.+++..++
T Consensus 27 ~~~~~~l~k~~~glG~~i~~~-----------~~~v~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~s~~d~~~~l~ 95 (126)
T 1wif_A 27 KVIQTKLTVGNLGLGLVVIQN-----------GPYLQISHLINKGAAASDGILQPGDVLISVGHANVLGYTLREFLKLLQ 95 (126)
T ss_dssp CEEEEEEECCTTCCCCCEEEE-----------TTEEEECCCCTTSSGGGCSSSCTTCBEEEESSSCCTTCCHHHHHHHHT
T ss_pred ceEEEEEecCCceEeEEEEcC-----------CCcEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHh
Confidence 45667787766 999998762 236899999999999999999999999999999998889999999998
Q ss_pred C--CCCeEEEEEecC
Q psy4596 238 E--PCPEILLKIQHD 250 (439)
Q Consensus 238 ~--~~~~v~l~v~r~ 250 (439)
. .+..+.|+|.|+
T Consensus 96 ~~~~G~~v~l~V~R~ 110 (126)
T 1wif_A 96 NITIGTVLQIKAYRG 110 (126)
T ss_dssp SCCSSCEEEEEEESS
T ss_pred cCCCCCEEEEEEEEC
Confidence 6 578899999997
No 289
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.19 E-value=1.8e-11 Score=101.31 Aligned_cols=93 Identities=24% Similarity=0.284 Sum_probs=74.2
Q ss_pred eEEEEEecCC-CccEEEeeCCCCCC-------------CCCC------C-CCCcEEEEEECCCChhhhcCCCCCCCEEEE
Q psy4596 160 LQDVVLPKSG-PLGFSIIGGTDHSC-------------IPFG------Q-HKPGIFISHIVPGGVAALSGKLRMGDRILA 218 (439)
Q Consensus 160 ~~~v~l~~~~-~lG~~i~~~~~~~~-------------~~~g------~-~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~ 218 (439)
.+.|+|.|.. +|||+|.+.+.... ..|+ . ...+++|..|.++|||+++| |++||+|++
T Consensus 9 ~r~v~l~r~~~g~Gf~l~~~t~y~~~~~~~~~~~~~~~G~~~G~~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~I~~ 87 (126)
T 2yuy_A 9 PKTVTLKRTSQGFGFTLRHFIVYPPESAIQFSYKDEENGNRGGKQRNRLEPMDTIFVKQVKEGGPAFEAG-LCTGDRIIK 87 (126)
T ss_dssp CCCEEEECCSSSCSCCBCCCCCCCCSSCCCSCSSSCCCCSCCCTTSCCCCCCCCCCBCCCCSSSHHHHHT-CCSSCCCCE
T ss_pred CEEEEEEECCCCcceeecCccccCCHHHHHHHHHhhcCcceeceeeecccCCCCEEEEEECCCChHHHcC-CCCCCEEEE
Confidence 3568888876 99999986432110 0010 0 12469999999999999999 999999999
Q ss_pred ECCeeCCCCCHHHHHHHHhCCCCeEEEEEecCCCC
Q psy4596 219 VNGRDVSKVTHEEAVLALLEPCPEILLKIQHDPHP 253 (439)
Q Consensus 219 VNg~~v~~~~~~~~~~~l~~~~~~v~l~v~r~~~~ 253 (439)
|||.++.++++.+++..|+..+..+.|+|.|.+..
T Consensus 88 ing~~v~~~~~~~~~~~l~~~g~~v~l~v~r~~~~ 122 (126)
T 2yuy_A 88 VNGESVIGKTYSQVIALIQNSDTTLELSVMPKDSG 122 (126)
T ss_dssp ETTEECSSCCHHHHHHHHHTCTTEEEEECCCCCCC
T ss_pred ECCEECCCCCHHHHHHHHHcCCCEEEEEEEECCCC
Confidence 99999999999999999988889999999987643
No 290
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=99.19 E-value=5e-10 Score=90.54 Aligned_cols=84 Identities=35% Similarity=0.496 Sum_probs=71.2
Q ss_pred eEEEEEecC--CCccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCC-CCCCEEEEECCeeCCCCCHHHHHHHH
Q psy4596 160 LQDVVLPKS--GPLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKL-RMGDRILAVNGRDVSKVTHEEAVLAL 236 (439)
Q Consensus 160 ~~~v~l~~~--~~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L-~~GD~Il~VNg~~v~~~~~~~~~~~l 236 (439)
..+|.|.+. .+|||.+....+ ..+++|..|.++|||+++| | ++||+|++|||.++.++++.++...+
T Consensus 2 ~~~v~l~~~~~~glG~~~~~~~~---------~~~~~V~~v~~~spA~~aG-ll~~GD~I~~ing~~v~~~~~~~~~~~l 71 (112)
T 1qau_A 2 VISVRLFKRKVGGLGFLVKERVS---------KPPVIISDLIRGGAAEQSG-LIQAGDIILAVNDRPLVDLSYDSALEVL 71 (112)
T ss_dssp EEEEEEECBTTTBTSEEEEECSS---------SSCEEEEEECTTSHHHHHT-CCCTTCEEEEETTEECTTSCHHHHHHHH
T ss_pred EEEEEEEcCCCCceeEEEEecCC---------CCCEEEEEeCCCChHHHcC-CCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 356777665 389999987543 2479999999999999999 8 99999999999999988899999888
Q ss_pred hC-CCCeEEEEEecCCCC
Q psy4596 237 LE-PCPEILLKIQHDPHP 253 (439)
Q Consensus 237 ~~-~~~~v~l~v~r~~~~ 253 (439)
.. .+..+.|++.|++..
T Consensus 72 ~~~~g~~v~l~v~R~g~~ 89 (112)
T 1qau_A 72 RGIASETHVVLILRGPEG 89 (112)
T ss_dssp HHSCSSSEEEEEEECCTT
T ss_pred HhCCCCcEEEEEEeCCcc
Confidence 75 468899999998765
No 291
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.18 E-value=2.4e-10 Score=89.77 Aligned_cols=81 Identities=27% Similarity=0.386 Sum_probs=68.2
Q ss_pred eeEEEEEecCC-CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHh
Q psy4596 159 FLQDVVLPKSG-PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALL 237 (439)
Q Consensus 159 ~~~~v~l~~~~-~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~ 237 (439)
+...+.+.+.. +|||++.... .|++|..|.++ |+++| |++||+|++|||+++.+++|.+++..++
T Consensus 10 ~~~~v~l~~~~~g~G~~i~~~~-----------~Gv~V~~v~~~--a~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~l~ 75 (96)
T 1ujv_A 10 ELMTLTIVKGAQGFGFTIADSP-----------TGQRVKQILDI--QGCPG-LCEGDLIVEINQQNVQNLSHTEVVDILK 75 (96)
T ss_dssp CCEEEEEECCSSSSSEEEEEET-----------TEEEEEEESCG--GGSTT-CCSSCEEEEETTEECSSCCHHHHHHHHH
T ss_pred eEEEEEEEeCCCceeEEEEcCC-----------CCEEEEEEecc--cccCC-CCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 45678888865 9999997532 27999999983 78899 9999999999999999999999999888
Q ss_pred C--CCCeEEEEEecCCCC
Q psy4596 238 E--PCPEILLKIQHDPHP 253 (439)
Q Consensus 238 ~--~~~~v~l~v~r~~~~ 253 (439)
. .+..+.|+|.|++..
T Consensus 76 ~~~~g~~v~l~v~R~g~~ 93 (96)
T 1ujv_A 76 DCPIGSETSLIIHRGSGP 93 (96)
T ss_dssp HSCTTSEEEEEEECCSSC
T ss_pred cCCCCCEEEEEEEECCCC
Confidence 5 378999999998654
No 292
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=99.18 E-value=8.9e-11 Score=95.35 Aligned_cols=84 Identities=27% Similarity=0.320 Sum_probs=71.5
Q ss_pred eeEEEEEecCC--CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHH
Q psy4596 159 FLQDVVLPKSG--PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLAL 236 (439)
Q Consensus 159 ~~~~v~l~~~~--~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l 236 (439)
.++.+.+.+.. .|||.+..... ..|++|..|.++|||+++| |++||+|++|||.++.++++.++...+
T Consensus 13 dp~~~~l~~~~~~~~G~~l~~~~~---------~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l 82 (114)
T 2edz_A 13 NPRECKLSKQEGQNYGFFLRIEKD---------TDGHLIRVIEEGSPAEKAG-LLDGDRVLRINGVFVDKEEHAQVVELV 82 (114)
T ss_dssp CCEEEEEECCTTCCCSCEEECCTT---------CCSCEEECCCTTCTTGGGT-CCTTCEEEEESSSBCSSSCHHHHHHHH
T ss_pred CCEEEEEeCCCCCcccEEEEEecC---------CCCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 45667777653 88998876432 3479999999999999999 999999999999999998899999988
Q ss_pred hCCCCeEEEEEecCCC
Q psy4596 237 LEPCPEILLKIQHDPH 252 (439)
Q Consensus 237 ~~~~~~v~l~v~r~~~ 252 (439)
+..+..+.|+|.|++.
T Consensus 83 ~~~g~~v~l~v~R~~~ 98 (114)
T 2edz_A 83 RKSGNSVTLLVLDGDS 98 (114)
T ss_dssp HHTCSEEEEEEECHHH
T ss_pred HcCCCEEEEEEEECCc
Confidence 8778999999998753
No 293
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=99.18 E-value=5.5e-11 Score=110.26 Aligned_cols=87 Identities=39% Similarity=0.513 Sum_probs=76.7
Q ss_pred eeEEEEEecCC--CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhh-cCCCCCCCEEEEECCeeCCCCCHHHHHHH
Q psy4596 159 FLQDVVLPKSG--PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAAL-SGKLRMGDRILAVNGRDVSKVTHEEAVLA 235 (439)
Q Consensus 159 ~~~~v~l~~~~--~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~-~G~L~~GD~Il~VNg~~v~~~~~~~~~~~ 235 (439)
..+.|.|.|.. +|||+|.++.+. ..|++|..|.++|+|++ +| |++||+|++|||+++.+++|.+++..
T Consensus 77 ~~r~V~L~k~~~~glGf~I~gg~d~--------~~gi~V~~V~~gspA~~~aG-L~~GD~Il~VNG~~v~~~t~~e~v~~ 147 (263)
T 1z87_A 77 QRRRVTVRKADAGGLGISIKGGREN--------KMPILISKIFKGLAADQTEA-LFVGDAILSVNGEDLSSATHDEAVQA 147 (263)
T ss_dssp SSEEECCCTTTTCCCCCEEEEETTT--------TEEEEEEECCTTSHHHHCTT-CCSSCEEEEESSCBCTTSCHHHHHHH
T ss_pred ccEEEEEEeCCCCCEeEEEeeccCC--------CCCEEEEEECCCCHHHHhCC-CCCCCEEEEECCEECCCcCHHHHHHH
Confidence 56889999863 999999987653 24799999999999999 68 99999999999999999999999999
Q ss_pred HhCCCCeEEEEEecCCCCC
Q psy4596 236 LLEPCPEILLKIQHDPHPE 254 (439)
Q Consensus 236 l~~~~~~v~l~v~r~~~~~ 254 (439)
++..+..+.|+|.|.+...
T Consensus 148 l~~~g~~V~L~V~R~~~~~ 166 (263)
T 1z87_A 148 LKKTGKEVVLEVKYMKEVS 166 (263)
T ss_dssp HHHCCSCCCEEEECCSSSS
T ss_pred HhcCCCeEEEEEEeCcccc
Confidence 9988889999999976543
No 294
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=99.18 E-value=1e-10 Score=104.13 Aligned_cols=84 Identities=36% Similarity=0.589 Sum_probs=73.8
Q ss_pred eeEEEEEecC--CCccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHH
Q psy4596 159 FLQDVVLPKS--GPLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLAL 236 (439)
Q Consensus 159 ~~~~v~l~~~--~~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l 236 (439)
..+.|.|.+. .+|||++.++.+. ..|++|..|.++|||+++| |++||+|++|||.++.+++|.+++..+
T Consensus 84 ~~~~v~l~k~~~~~lG~~i~~~~~~--------~~~~~V~~V~~gspA~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~l 154 (192)
T 3k1r_A 84 KLKEVRLDRLHPEGLGLSVRGGLEF--------GCGLFISHLIKGGQADSVG-LQVGDEIVRINGYSISSCTHEEVINLI 154 (192)
T ss_dssp SCEEEEEETTSTTCCCEEEEEEGGG--------TEEEEEEEECTTSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHH
T ss_pred ceEEEEEEeCCCCceeEEEEccccc--------CCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 4577889887 3999999886542 2379999999999999999 999999999999999999999999888
Q ss_pred hCCCCeEEEEEecCCC
Q psy4596 237 LEPCPEILLKIQHDPH 252 (439)
Q Consensus 237 ~~~~~~v~l~v~r~~~ 252 (439)
+. +..+.|+|.|.+.
T Consensus 155 ~~-~~~v~l~v~r~g~ 169 (192)
T 3k1r_A 155 RT-EKTVSIKVRHIGL 169 (192)
T ss_dssp TS-SSEEEEEEEECCE
T ss_pred cC-CCeEEEEEEECCc
Confidence 87 8999999999764
No 295
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.18 E-value=8e-11 Score=95.43 Aligned_cols=82 Identities=34% Similarity=0.592 Sum_probs=69.9
Q ss_pred eeeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhc
Q psy4596 258 EITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRY 337 (439)
Q Consensus 258 ~v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~ 337 (439)
.+.+.+ ...+|||.+.++.. ..+++|..|.+++||+++|+|++||+|++|||+++.++++.+++.+++.
T Consensus 18 ~v~l~k-~~~glG~~l~~~~~----------~~gv~V~~V~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~~~~ 86 (113)
T 1um7_A 18 KIILHK-GSTGLGFNIVGGED----------GEGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQAAAALKR 86 (113)
T ss_dssp EEEEEC-CSSCSSBCCBCCST----------TCCCBCCCBCSSSHHHHTTCCCTTCEEEEESSCBCTTCCHHHHHHHHHS
T ss_pred EEEEEE-CCCcccEEEEeccC----------CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 344444 35679999987531 3489999999999999999999999999999999999999999999998
Q ss_pred CCCeEEEEEecCC
Q psy4596 338 SGHQISLTVCKGF 350 (439)
Q Consensus 338 ~~~~v~l~v~r~~ 350 (439)
.+..+.|+|.|..
T Consensus 87 ~~~~v~l~v~r~~ 99 (113)
T 1um7_A 87 AGQSVTIVAQYRP 99 (113)
T ss_dssp CCSEEEEEEECCH
T ss_pred CCCcEEEEEEECc
Confidence 8899999998753
No 296
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=99.17 E-value=1.8e-10 Score=88.90 Aligned_cols=78 Identities=22% Similarity=0.368 Sum_probs=62.2
Q ss_pred eeeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhc
Q psy4596 258 EITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRY 337 (439)
Q Consensus 258 ~v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~ 337 (439)
++.+.+ ...+|||++.+.. ...+++|..+ ++|||+ +| |++||+|++|||+++.++++.+++.+|++
T Consensus 6 ~v~l~k-~~~g~G~~~~~~~----------~~~~~~v~~v-~~spA~-aG-l~~GD~I~~vng~~v~~~~~~~~~~~l~~ 71 (88)
T 3bpu_A 6 TVHIVK-GPMGFGFTIADSP----------GGGGQRVKQI-VDSPRS-RG-LKEGDLIVEVNKKNVQALTHNQVVDMLVE 71 (88)
T ss_dssp EEEEEC-BTTBSSCEEEECT----------TSSSEEEEEC-CC--CC-TT-CCTTCEEEEETTEECTTSCHHHHHHHHHT
T ss_pred EEEEEc-CCCceeEEEEecC----------CCCcEEEEEe-cCChhH-hC-CCCCCEEEEECCEEcCCCCHHHHHHHHHh
Confidence 344444 3467999997542 1347899887 999999 88 99999999999999999999999999985
Q ss_pred --CCCeEEEEEecC
Q psy4596 338 --SGHQISLTVCKG 349 (439)
Q Consensus 338 --~~~~v~l~v~r~ 349 (439)
.+..+.|+|.|.
T Consensus 72 ~~~g~~v~l~v~R~ 85 (88)
T 3bpu_A 72 SPKGSEVTLLVQRQ 85 (88)
T ss_dssp SCTTCEEEEEEEEE
T ss_pred CCCCCEEEEEEEeC
Confidence 578999999875
No 297
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=99.16 E-value=1.4e-10 Score=94.14 Aligned_cols=82 Identities=27% Similarity=0.535 Sum_probs=69.5
Q ss_pred ceeeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHh
Q psy4596 257 QEITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLR 336 (439)
Q Consensus 257 ~~v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~ 336 (439)
.++.+.......|||.+.++.. ...+++|..|.++++|+++| |++||+|++|||+++.++++.+++.+++
T Consensus 17 ~~v~~~~~~~~~lG~~l~~~~~---------~~~gv~V~~V~~~s~A~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~~~ 86 (114)
T 1x5n_A 17 KKVFISLVGSRGLGCSISSGPI---------QKPGIFISHVKPGSLSAEVG-LEIGDQIVEVNGVDFSNLDHKEAVNVLK 86 (114)
T ss_dssp EEEEECCCSSCCCCEEEEECCS---------SSCSEEEEEECTTSTTTTTT-CCTTCEEEEETTEETTSCCTTHHHHHHH
T ss_pred EEEEEEEcCCCceeEEEeecCC---------CCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHh
Confidence 4555656667889999987531 23489999999999999999 9999999999999999999888999888
Q ss_pred cCCCeEEEEEecC
Q psy4596 337 YSGHQISLTVCKG 349 (439)
Q Consensus 337 ~~~~~v~l~v~r~ 349 (439)
.. ..+.|+|.|.
T Consensus 87 ~~-~~v~l~v~r~ 98 (114)
T 1x5n_A 87 SS-RSLTISIVAA 98 (114)
T ss_dssp HC-SSEEEEECSS
T ss_pred cC-CeEEEEEEcC
Confidence 75 6899999876
No 298
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.15 E-value=5.9e-11 Score=95.80 Aligned_cols=78 Identities=19% Similarity=0.310 Sum_probs=65.4
Q ss_pred eeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcC
Q psy4596 259 ITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRYS 338 (439)
Q Consensus 259 v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~ 338 (439)
+.+.+ ....|||.+.+. .+++|..|.+++||+++| |++||+|++|||+++.++++++++++|+..
T Consensus 19 v~l~~-~~~~~G~~l~~~-------------~~v~V~~V~~~spA~~aG-L~~GD~Il~InG~~v~~~~~~d~~~~i~~~ 83 (111)
T 1vae_A 19 IHFTV-EEGDLGFTLRGN-------------TPVQVHFLDPHCSASLAG-AKEGDYIVSIQGVDCKWLTVSEVMKLLKSF 83 (111)
T ss_dssp CCEEC-CSSCCSCCEESS-------------SSCEECCCCTTSSHHHHH-CCTTCEEEEETTEECSSCCHHHHHHHHHHT
T ss_pred EEEEc-CCCcccEEEeCC-------------CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 33443 467789988653 268999999999999999 999999999999999988999999999986
Q ss_pred CC-eEEEEEecCCc
Q psy4596 339 GH-QISLTVCKGFE 351 (439)
Q Consensus 339 ~~-~v~l~v~r~~~ 351 (439)
+. .+.|+|.|..+
T Consensus 84 ~~~~v~l~V~~~~~ 97 (111)
T 1vae_A 84 GGEEVEMKVVSLLD 97 (111)
T ss_dssp TTSEECEEEECEEC
T ss_pred CCceEEEEEEecCC
Confidence 54 69999987643
No 299
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.15 E-value=1.1e-10 Score=94.62 Aligned_cols=85 Identities=24% Similarity=0.393 Sum_probs=71.0
Q ss_pred eeEEEEEecCC----CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHH
Q psy4596 159 FLQDVVLPKSG----PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVL 234 (439)
Q Consensus 159 ~~~~v~l~~~~----~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~ 234 (439)
..+.+.|.+.+ .|||+|....+.. ..+++|..|.++|||+++| |++||+|++|||.++.+++|.++..
T Consensus 15 ~~~~v~l~k~~~~~~~~G~~v~~~~~~~-------~~gv~V~~V~~~spA~~aG-L~~GD~Il~Ing~~v~~~~~~~~~~ 86 (114)
T 2d8i_A 15 VTQSIHIEKSDTAADTYGFSLSSVEEDG-------IRRLYVNSVKETGLASKKG-LKAGDEILEINNRAADALNSSMLKD 86 (114)
T ss_dssp EEEEEEEECSCTTTCCCCCEEEEEEETT-------EEEEEEEECCTTSSHHHHT-CCTTCCEEEESSCBGGGCCHHHHHH
T ss_pred ceEEEEEEeCCCCccccCEEEEecCcCC-------cCCEEEEEeCCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHH
Confidence 57888998876 4999998754320 1379999999999999999 9999999999999999888999888
Q ss_pred HHhCCCCeEEEEEecCCCC
Q psy4596 235 ALLEPCPEILLKIQHDPHP 253 (439)
Q Consensus 235 ~l~~~~~~v~l~v~r~~~~ 253 (439)
.++. ..+.|+|.|.+..
T Consensus 87 ~l~~--~~v~l~v~R~p~~ 103 (114)
T 2d8i_A 87 FLSQ--PSLGLLVRTYPEL 103 (114)
T ss_dssp HHTS--SEEEEEEEECCCS
T ss_pred HHhC--CcEEEEEEECCCC
Confidence 8874 3889999987654
No 300
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.15 E-value=3.7e-10 Score=87.44 Aligned_cols=65 Identities=37% Similarity=0.640 Sum_probs=58.2
Q ss_pred CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHhCCCCeEEEEEec
Q psy4596 170 PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALLEPCPEILLKIQH 249 (439)
Q Consensus 170 ~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l~v~r 249 (439)
.|||.+.+ | +|..|.++|+|+++| |++||+|++|||.++.++++.++...++..+..+.|+|.+
T Consensus 25 ~lG~~~~~--------------G-~V~~V~~~spA~~aG-L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~g~~v~l~v~p 88 (90)
T 1y7n_A 25 QLGFSVQN--------------G-IICSLMRGGIAERGG-VRVGHRIIEINGQSVVATPHEKIVHILSNAVGEIHMKTMP 88 (90)
T ss_dssp CCCEEEET--------------T-EEEEECTTSHHHHHT-CCSSCEEEEETTEECTTSCHHHHHHHHHHCCEEEEEEEEC
T ss_pred ccCeEecC--------------C-EEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEE
Confidence 89998743 3 899999999999999 9999999999999998889999999998778888888875
Q ss_pred C
Q psy4596 250 D 250 (439)
Q Consensus 250 ~ 250 (439)
.
T Consensus 89 ~ 89 (90)
T 1y7n_A 89 A 89 (90)
T ss_dssp C
T ss_pred C
Confidence 3
No 301
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=99.14 E-value=2.2e-10 Score=88.83 Aligned_cols=71 Identities=18% Similarity=0.296 Sum_probs=59.2
Q ss_pred cccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCeEEEEE
Q psy4596 267 EKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRYSGHQISLTV 346 (439)
Q Consensus 267 ~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l~v 346 (439)
..|||++...... ...+++|..|.++|||+++| |++||+|++|||+++.+++++++.+++++ ..++|+|
T Consensus 20 ~~~Gf~v~~~~~~--------~~~g~~V~~V~~~spA~~aG-L~~GD~Il~vng~~v~~~~~~~l~~~l~~--~~l~ltV 88 (94)
T 3kzd_A 20 DTYGFSLSSVEED--------GIRRLYVNSVKETGLASKKG-LKAGDEILEINNRAADALNSSMLKDFLSQ--PSLGLLV 88 (94)
T ss_dssp -CCSEEEEEECSS--------SSCEEEEEEECTTSHHHHTT-CCTTCEEEEETTEEGGGCCHHHHHHHHHS--SEEEEEE
T ss_pred CCcCEEEEecCCC--------CcCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhC--CeEEEEE
Confidence 4699999763211 13479999999999999999 99999999999999999999999999985 5677777
Q ss_pred ec
Q psy4596 347 CK 348 (439)
Q Consensus 347 ~r 348 (439)
..
T Consensus 89 ~~ 90 (94)
T 3kzd_A 89 RT 90 (94)
T ss_dssp EE
T ss_pred Ee
Confidence 54
No 302
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.14 E-value=4.9e-11 Score=93.73 Aligned_cols=80 Identities=24% Similarity=0.300 Sum_probs=69.4
Q ss_pred eeEEEEEecCC---CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHH
Q psy4596 159 FLQDVVLPKSG---PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLA 235 (439)
Q Consensus 159 ~~~~v~l~~~~---~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~ 235 (439)
..++|.|.+.. +|||.+.+ ..+++|..|.++|||+ +| |++||+|++|||.++.+++|.++...
T Consensus 8 ~~~~v~l~~~~~~~~~G~~l~~------------~~~~~V~~V~~~spA~-ag-L~~GD~Il~ing~~v~~~~~~~~~~~ 73 (96)
T 2edv_A 8 VRHTVKIDKDTLLQDYGFHISE------------SLPLTVVAVTAGGSAH-GK-LFPGDQILQMNNEPAEDLSWERAVDI 73 (96)
T ss_dssp EEEEEEECCCSSSCSCSBCCCS------------SSSCBCCCBCSSSSST-TT-SCTTCBEEEESSCBSTTCCHHHHHHH
T ss_pred ccEEEEEEECCCCCcccEEEec------------CCCeEEEEECCCCchh-hC-CCCCCEEEEECCEECCCCCHHHHHHH
Confidence 45778888865 78998875 2368999999999995 88 99999999999999999999999988
Q ss_pred HhCCCCeEEEEEecCCC
Q psy4596 236 LLEPCPEILLKIQHDPH 252 (439)
Q Consensus 236 l~~~~~~v~l~v~r~~~ 252 (439)
++..+..+.|+|.|+..
T Consensus 74 ~~~~g~~v~l~v~R~~~ 90 (96)
T 2edv_A 74 LREAEDSLSITVVRCTS 90 (96)
T ss_dssp HHHCSSCEEEEEEECCC
T ss_pred HHcCCCeEEEEEEECCC
Confidence 88788999999999863
No 303
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=99.14 E-value=2.6e-10 Score=86.39 Aligned_cols=72 Identities=22% Similarity=0.416 Sum_probs=62.2
Q ss_pred eccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCeE
Q psy4596 263 RQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRYSGHQI 342 (439)
Q Consensus 263 ~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v 342 (439)
......|||.+. .|++|.+|.++|||+++|.|++||+|++|||.++.++++.++..+|+..+..+
T Consensus 9 ~~~~~~~g~~~~---------------~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v 73 (81)
T 2rcz_A 9 SRKNEEYGLRLA---------------SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSKGKL 73 (81)
T ss_dssp CSTTCCCCEEEE---------------EEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTCCHHHHHHHHHTSTTEE
T ss_pred CCCCCCCCEEEe---------------CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHCCCCeE
Confidence 334566788764 17999999999999999999999999999999999889999999999877899
Q ss_pred EEEEecC
Q psy4596 343 SLTVCKG 349 (439)
Q Consensus 343 ~l~v~r~ 349 (439)
.|+|.|.
T Consensus 74 ~l~v~R~ 80 (81)
T 2rcz_A 74 KMVVQRD 80 (81)
T ss_dssp EEEEEC-
T ss_pred EEEEEeC
Confidence 9999774
No 304
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=99.13 E-value=2.6e-10 Score=92.22 Aligned_cols=84 Identities=27% Similarity=0.423 Sum_probs=70.5
Q ss_pred eeeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCC-CCCCEEEEECCEEcCCCCHHHHHHHHh
Q psy4596 258 EITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRL-KVGMRLLEVNGMSLLGASHQEAVNTLR 336 (439)
Q Consensus 258 ~v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L-~~GD~Il~VNg~~v~~~~~~~~~~~l~ 336 (439)
++.+.+....+|||.+.... ...+++|..|.++|||+++| | ++||+|++|||.++.++++.++..+|+
T Consensus 4 ~v~l~~~~~~glG~~~~~~~----------~~~~~~V~~v~~~spA~~aG-ll~~GD~I~~ing~~v~~~~~~~~~~~l~ 72 (112)
T 1qau_A 4 SVRLFKRKVGGLGFLVKERV----------SKPPVIISDLIRGGAAEQSG-LIQAGDIILAVNDRPLVDLSYDSALEVLR 72 (112)
T ss_dssp EEEEECBTTTBTSEEEEECS----------SSSCEEEEEECTTSHHHHHT-CCCTTCEEEEETTEECTTSCHHHHHHHHH
T ss_pred EEEEEcCCCCceeEEEEecC----------CCCCEEEEEeCCCChHHHcC-CCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 45555565678999997643 13479999999999999999 7 999999999999999988999999998
Q ss_pred c-CCCeEEEEEecCCcc
Q psy4596 337 Y-SGHQISLTVCKGFER 352 (439)
Q Consensus 337 ~-~~~~v~l~v~r~~~~ 352 (439)
. .+..+.|++.|....
T Consensus 73 ~~~g~~v~l~v~R~g~~ 89 (112)
T 1qau_A 73 GIASETHVVLILRGPEG 89 (112)
T ss_dssp HSCSSSEEEEEEECCTT
T ss_pred hCCCCcEEEEEEeCCcc
Confidence 7 468999999987543
No 305
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=99.13 E-value=3.8e-10 Score=88.00 Aligned_cols=80 Identities=18% Similarity=0.292 Sum_probs=66.7
Q ss_pred eeEEEEEecCC-CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHh
Q psy4596 159 FLQDVVLPKSG-PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALL 237 (439)
Q Consensus 159 ~~~~v~l~~~~-~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~ 237 (439)
....+.+.+.. ++||.+... ..+++|..|.++|||+++| |++||+|++|||.++...+|.++...+.
T Consensus 17 ~~~~l~l~~~~~g~G~~l~~~-----------~~~~~I~~V~~gSpA~~AG-L~~GD~I~~Ing~~v~~~s~~dv~~~i~ 84 (101)
T 3qik_A 17 LAKRLLILPQEEDYGFDIEEK-----------NKAVVVKSVQRGSLAEVAG-LQVGRKIYSINEDLVFLRPFSEVESILN 84 (101)
T ss_dssp TEEEEEECCCSSSSSEEEEEE-----------TTEEEEEEECTTSHHHHHT-CCTTCBEEEETTEESTTSCHHHHHHHHH
T ss_pred ecCeEEEEeCCCcccEEEEcc-----------CCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEEcCcCCHHHHHHHHH
Confidence 34566676655 899998863 2368999999999999999 9999999999999997779999998887
Q ss_pred C---CCCeEEEEEecC
Q psy4596 238 E---PCPEILLKIQHD 250 (439)
Q Consensus 238 ~---~~~~v~l~v~r~ 250 (439)
. .++.+.|+|...
T Consensus 85 ~~~~~g~~v~LLV~~~ 100 (101)
T 3qik_A 85 QSFCSRRPLRLLVATK 100 (101)
T ss_dssp HHHHTTCCEEEEEECC
T ss_pred HhhccCCeEEEEEecC
Confidence 5 588899888643
No 306
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=99.13 E-value=3.4e-10 Score=101.04 Aligned_cols=79 Identities=34% Similarity=0.497 Sum_probs=68.0
Q ss_pred CCccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHhCCCCeEEEEEe
Q psy4596 169 GPLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALLEPCPEILLKIQ 248 (439)
Q Consensus 169 ~~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l~v~ 248 (439)
++|||+|.++.+....++.....|++|..|.++|||++ | |++||+|++|||.++.+++|.+++..++..+..+.|+|.
T Consensus 2 ~g~Gf~i~gg~~~~~~~~~~~~~g~~V~~v~~~spA~~-g-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~ 79 (195)
T 2qbw_A 2 PELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-L-LQPGDKIIQANGYSFINIEHGQAVSLLKTFQNTVELIIV 79 (195)
T ss_dssp CCSSEEEEECTTSCCCSSCTTCCSEEEEEECTTSTTTT-T-CCTTCEEEEETTEECTTCCHHHHHHHHHHCCSEEEEEEE
T ss_pred CcccEEEECCcCCCCCccccCCCCEEEEEECCCChHHh-C-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEE
Confidence 47999999987532223333456899999999999999 9 999999999999999999999999999888889999999
Q ss_pred c
Q psy4596 249 H 249 (439)
Q Consensus 249 r 249 (439)
|
T Consensus 80 r 80 (195)
T 2qbw_A 80 R 80 (195)
T ss_dssp E
T ss_pred E
Confidence 9
No 307
>2lob_A Golgi-associated PDZ and coiled-coil motif-contai protein; structural protein-hydrolase complex, peptide binding protei; NMR {Homo sapiens}
Probab=98.73 E-value=5.1e-12 Score=102.30 Aligned_cols=80 Identities=35% Similarity=0.611 Sum_probs=67.8
Q ss_pred eeeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhh-cCCCCCCCEEEEECCEEcCCCCHHHHHHHHh
Q psy4596 258 EITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKR-DGRLKVGMRLLEVNGMSLLGASHQEAVNTLR 336 (439)
Q Consensus 258 ~v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~-~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~ 336 (439)
.+.+.+....+|||.+.++.. ...+++|..|.++|||++ +| |++||+|++|||.++.+.++.+++.+|+
T Consensus 30 ~v~l~k~~~~glG~~l~~g~~---------~~~gv~V~~V~~~spA~~~aG-L~~GD~Il~ING~~v~~~~~~~~~~~l~ 99 (112)
T 2lob_A 30 KVLLLKEDHEGLGISITGGKE---------HGVPILISEIHPGQPADRCGG-LHVGDAILAVNGVNLRDTKHKEAVTILS 99 (112)
Confidence 455556666789999987642 124799999999999999 78 9999999999999999999999999999
Q ss_pred cCCCeEEEEEe
Q psy4596 337 YSGHQISLTVC 347 (439)
Q Consensus 337 ~~~~~v~l~v~ 347 (439)
..++.+.|+|.
T Consensus 100 ~~~~~v~l~V~ 110 (112)
T 2lob_A 100 QQRGEIEFEVV 110 (112)
Confidence 88877888774
No 308
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=99.13 E-value=2e-10 Score=89.61 Aligned_cols=71 Identities=23% Similarity=0.378 Sum_probs=62.0
Q ss_pred cCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhc---CCCe
Q psy4596 265 EGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRY---SGHQ 341 (439)
Q Consensus 265 ~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~---~~~~ 341 (439)
....+||.+... ..+++|.+|.++|||+++| |++||+|++|||.++...+++++...+++ .+++
T Consensus 26 ~~~g~G~~l~~~------------~~~~~I~~V~~gSpA~~AG-L~~GD~I~~Ing~~v~~~s~~dv~~~i~~~~~~g~~ 92 (101)
T 3qik_A 26 QEEDYGFDIEEK------------NKAVVVKSVQRGSLAEVAG-LQVGRKIYSINEDLVFLRPFSEVESILNQSFCSRRP 92 (101)
T ss_dssp CSSSSSEEEEEE------------TTEEEEEEECTTSHHHHHT-CCTTCBEEEETTEESTTSCHHHHHHHHHHHHHTTCC
T ss_pred CCCcccEEEEcc------------CCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEEcCcCCHHHHHHHHHHhhccCCe
Confidence 456788888642 2368999999999999999 99999999999999988899999999987 5899
Q ss_pred EEEEEec
Q psy4596 342 ISLTVCK 348 (439)
Q Consensus 342 v~l~v~r 348 (439)
+.|.|+.
T Consensus 93 v~LLV~~ 99 (101)
T 3qik_A 93 LRLLVAT 99 (101)
T ss_dssp EEEEEEC
T ss_pred EEEEEec
Confidence 9999975
No 309
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=99.12 E-value=3.7e-10 Score=91.62 Aligned_cols=80 Identities=43% Similarity=0.676 Sum_probs=66.5
Q ss_pred EEEEEecCC--CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHhC
Q psy4596 161 QDVVLPKSG--PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALLE 238 (439)
Q Consensus 161 ~~v~l~~~~--~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~ 238 (439)
+++.+.+.+ +|||++.++.+. ..|++|..|.++++|+++| |++||+|++|||.++.++.+.++...++.
T Consensus 17 ~~v~~~~~~~~~lG~~l~~~~~~--------~~gv~V~~V~~~s~A~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~~~~ 87 (114)
T 1x5n_A 17 KKVFISLVGSRGLGCSISSGPIQ--------KPGIFISHVKPGSLSAEVG-LEIGDQIVEVNGVDFSNLDHKEAVNVLKS 87 (114)
T ss_dssp EEEEECCCSSCCCCEEEEECCSS--------SCSEEEEEECTTSTTTTTT-CCTTCEEEEETTEETTSCCTTHHHHHHHH
T ss_pred EEEEEEEcCCCceeEEEeecCCC--------CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhc
Confidence 556665544 999999987542 3479999999999999999 99999999999999999988778777765
Q ss_pred CCCeEEEEEecC
Q psy4596 239 PCPEILLKIQHD 250 (439)
Q Consensus 239 ~~~~v~l~v~r~ 250 (439)
. ..+.|+|.|+
T Consensus 88 ~-~~v~l~v~r~ 98 (114)
T 1x5n_A 88 S-RSLTISIVAA 98 (114)
T ss_dssp C-SSEEEEECSS
T ss_pred C-CeEEEEEEcC
Confidence 4 6789999887
No 310
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.12 E-value=7.2e-10 Score=86.97 Aligned_cols=71 Identities=25% Similarity=0.358 Sum_probs=61.2
Q ss_pred cCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcC--CCeE
Q psy4596 265 EGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRYS--GHQI 342 (439)
Q Consensus 265 ~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~--~~~v 342 (439)
...+|||.+... ..|++|..|.++ |+.+| |++||+|++|||+++.+++|.+++++|+.. +..+
T Consensus 19 ~~~g~G~~i~~~------------~~Gv~V~~v~~~--a~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v 83 (96)
T 1ujv_A 19 GAQGFGFTIADS------------PTGQRVKQILDI--QGCPG-LCEGDLIVEINQQNVQNLSHTEVVDILKDCPIGSET 83 (96)
T ss_dssp CSSSSSEEEEEE------------TTEEEEEEESCG--GGSTT-CCSSCEEEEETTEECSSCCHHHHHHHHHHSCTTSEE
T ss_pred CCCceeEEEEcC------------CCCEEEEEEecc--cccCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCCCEE
Confidence 457899999642 227999999983 78888 999999999999999999999999999984 7899
Q ss_pred EEEEecCC
Q psy4596 343 SLTVCKGF 350 (439)
Q Consensus 343 ~l~v~r~~ 350 (439)
.|+|.|..
T Consensus 84 ~l~v~R~g 91 (96)
T 1ujv_A 84 SLIIHRGS 91 (96)
T ss_dssp EEEEECCS
T ss_pred EEEEEECC
Confidence 99999864
No 311
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.11 E-value=9.9e-10 Score=91.07 Aligned_cols=83 Identities=36% Similarity=0.574 Sum_probs=67.3
Q ss_pred EEEEEec--CCCccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHhC
Q psy4596 161 QDVVLPK--SGPLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALLE 238 (439)
Q Consensus 161 ~~v~l~~--~~~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~ 238 (439)
+++.+.. ...|||.+.+..+. ..|++|..|.++|||+++| |++||+|++|||.++.++++.+++..++.
T Consensus 22 ~~v~v~~~~~~~lG~~~~~~~~~--------~~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~~~~ 92 (128)
T 1uf1_A 22 KKVNLVLGDGRSLGLTIRGGAEY--------GLGIYITGVDPGSEAEGSG-LKVGDQILEVNGRSFLNILHDEAVRLLKS 92 (128)
T ss_dssp EEEEEECCSSCCCCEEEECCTTT--------TCCCEEEEECTTCHHHHHT-CCTTCEEEEETTEECSSCCHHHHHHHHTT
T ss_pred EEEEEEECCCCccCEEEECcccC--------CCCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHhc
Confidence 4444443 35899999875331 2379999999999999999 99999999999999999989777766655
Q ss_pred CCCeEEEEEecCCCC
Q psy4596 239 PCPEILLKIQHDPHP 253 (439)
Q Consensus 239 ~~~~v~l~v~r~~~~ 253 (439)
+..+.|+|.|++..
T Consensus 93 -~~~v~l~v~R~g~~ 106 (128)
T 1uf1_A 93 -SRHLILTVKDVGRL 106 (128)
T ss_dssp -CSEEEEEEECCSCC
T ss_pred -CCeEEEEEEECCcc
Confidence 57899999998765
No 312
>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}
Probab=99.11 E-value=3.4e-10 Score=90.25 Aligned_cols=86 Identities=19% Similarity=0.188 Sum_probs=67.4
Q ss_pred eEEEEEecC--CCccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHh
Q psy4596 160 LQDVVLPKS--GPLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALL 237 (439)
Q Consensus 160 ~~~v~l~~~--~~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~ 237 (439)
.+.+.+.+. +.|||++.+........ .....+++|..|.++|||+++| |++||+|++|||.++.++++.++...++
T Consensus 16 ~~~v~l~~~~~~~~G~~l~~~~~~~~~~-~~~~~~~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~l~ 93 (104)
T 2z17_A 16 RKLVTVEKQDNETFGFEIQSYRPQNQNA-CSSEMFTLICKIQEDSPAHCAG-LQAGDVLANINGVSTEGFTYKQVVDLIR 93 (104)
T ss_dssp CCEEEEECCTTSCCSEEEEECCCCCCSS-SCCSCCEEEEEECTTSHHHHHT-CCTTCBCCEETTEECTTCCHHHHHHHHH
T ss_pred ceEEEEEeCCCCCccEEEEeeecccCCc-ccCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHHH
Confidence 456778775 38999999854321100 0123489999999999999999 9999999999999999999999999988
Q ss_pred CCCCeEEEEE
Q psy4596 238 EPCPEILLKI 247 (439)
Q Consensus 238 ~~~~~v~l~v 247 (439)
..+..+.|+|
T Consensus 94 ~~~~~v~l~v 103 (104)
T 2z17_A 94 SSGNLLTIET 103 (104)
T ss_dssp HTTTEEEEEC
T ss_pred hCCCcEEEEE
Confidence 7666777664
No 313
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=99.11 E-value=4.9e-10 Score=92.93 Aligned_cols=84 Identities=30% Similarity=0.406 Sum_probs=71.4
Q ss_pred eeEEEEEecCC-CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHh
Q psy4596 159 FLQDVVLPKSG-PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALL 237 (439)
Q Consensus 159 ~~~~v~l~~~~-~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~ 237 (439)
..+.+.+.+.. +|||.+....+ ..|++|..|.++|+|+++| |++||+|++|||.++.++++.++...+.
T Consensus 9 ~~r~v~l~~~~~g~G~~l~~~~~---------~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~ 78 (128)
T 2kjd_A 9 RPRLCTMKKGPSGYGFNLHSDKS---------KPGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIR 78 (128)
T ss_dssp CCEEEEEECCSSSCCEEEEECSS---------SCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred CcEEEEEecCCCcccEEEEecCC---------CCCEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 45778888876 99999987543 2379999999999999999 9999999999999999888999998888
Q ss_pred CC-CCeEEEEEecCCC
Q psy4596 238 EP-CPEILLKIQHDPH 252 (439)
Q Consensus 238 ~~-~~~v~l~v~r~~~ 252 (439)
.. +..+.|+|.|++.
T Consensus 79 ~~~~~~~~l~v~R~g~ 94 (128)
T 2kjd_A 79 AGGDETKLLVVDRETD 94 (128)
T ss_dssp TTCSEEEEEEECHHHH
T ss_pred hCCCCEEEEEEEeCCc
Confidence 65 4567788988764
No 314
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=99.11 E-value=4e-10 Score=87.28 Aligned_cols=70 Identities=26% Similarity=0.424 Sum_probs=60.1
Q ss_pred CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHhC--CCCeEEEEE
Q psy4596 170 PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALLE--PCPEILLKI 247 (439)
Q Consensus 170 ~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~--~~~~v~l~v 247 (439)
.|||++... ..|++|..|.++|||+++| |++||+|++|||.++.+.++.++...+.. .+..+.|+|
T Consensus 18 ~lG~~~~~~-----------~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v 85 (90)
T 2eaq_A 18 DFGFTIKWD-----------IPGIFVASVEAGSPAEFSQ-LQVDDEIIAINNTKFSYNDSKEWEEAMAKAQETGHLVMDV 85 (90)
T ss_dssp CCSEEEEEE-----------TTEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECCTTCHHHHHHHHHHHHHHTEEEEEE
T ss_pred cccEEEEec-----------CCCEEEEEECCCChHHHcC-CCCCCEEEEECCEEccCCCHHHHHHHHHhcCCCCEEEEEE
Confidence 689988742 2379999999999999999 99999999999999966689988887763 578899999
Q ss_pred ecCC
Q psy4596 248 QHDP 251 (439)
Q Consensus 248 ~r~~ 251 (439)
.|++
T Consensus 86 ~R~g 89 (90)
T 2eaq_A 86 RRYG 89 (90)
T ss_dssp EEEC
T ss_pred EeCC
Confidence 8865
No 315
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=99.10 E-value=4.7e-10 Score=87.20 Aligned_cols=60 Identities=23% Similarity=0.365 Sum_probs=55.3
Q ss_pred CeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCeEEEEEecCC
Q psy4596 291 GVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRYSGHQISLTVCKGF 350 (439)
Q Consensus 291 gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l~v~r~~ 350 (439)
+++|..|.++|+|+++|+|++||+|++|||.++.++++.++..+|+..+..+.|+|.|..
T Consensus 24 gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~r~g 83 (92)
T 3cyy_A 24 HIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSKGKLKMVVQRDE 83 (92)
T ss_dssp EEEEEEECTTCHHHHSCCCCTTCEEEEETTEECTTCCHHHHHHHHHTTTTEEEEEEEC--
T ss_pred CEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCcEEEEEEeCC
Confidence 799999999999999999999999999999999988999999999987789999998864
No 316
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=99.10 E-value=3.7e-10 Score=94.98 Aligned_cols=84 Identities=30% Similarity=0.523 Sum_probs=67.0
Q ss_pred cccceeecCCccCCC---CCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhc-CCCeE
Q psy4596 267 EKLGMHIKGGLRGQR---GNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRY-SGHQI 342 (439)
Q Consensus 267 ~~lG~~i~~~~~~~~---g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~-~~~~v 342 (439)
..|||.+.++..... .........|++|..|.++|||+++| |++||+|++|||+++.++++.+++.+|+. .+..+
T Consensus 38 ~~lG~~i~~g~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~l~~~~g~~v 116 (139)
T 2vz5_A 38 LILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAG-LQIGDKIMQVNGWDMTMVTHDQARKRLTKRSEEVV 116 (139)
T ss_dssp EECSEEEEECTTSCGGGCSSCSSTTCCCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHCCTTCSEE
T ss_pred ccccEEEEccccCChhhhhhcccCCCCCEEEEEECCCCHHHHCC-CCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCCEE
Confidence 368999877543211 00011234699999999999999999 99999999999999999999999999997 56889
Q ss_pred EEEEecCCc
Q psy4596 343 SLTVCKGFE 351 (439)
Q Consensus 343 ~l~v~r~~~ 351 (439)
.|+|.|...
T Consensus 117 ~l~v~R~g~ 125 (139)
T 2vz5_A 117 RLLVTRQSL 125 (139)
T ss_dssp EEEEEECC-
T ss_pred EEEEEECCE
Confidence 999998753
No 317
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=99.10 E-value=2.4e-10 Score=88.52 Aligned_cols=70 Identities=17% Similarity=0.281 Sum_probs=60.8
Q ss_pred cccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhc--CCCeEEE
Q psy4596 267 EKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRY--SGHQISL 344 (439)
Q Consensus 267 ~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~--~~~~v~l 344 (439)
..|||.+... ..+++|..|.++|||+++| |++||+|++|||.++.+.++.++..+|+. .+..+.|
T Consensus 17 ~~lG~~~~~~------------~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~g~~v~l 83 (90)
T 2eaq_A 17 LDFGFTIKWD------------IPGIFVASVEAGSPAEFSQ-LQVDDEIIAINNTKFSYNDSKEWEEAMAKAQETGHLVM 83 (90)
T ss_dssp SCCSEEEEEE------------TTEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECCTTCHHHHHHHHHHHHHHTEEEE
T ss_pred CcccEEEEec------------CCCEEEEEECCCChHHHcC-CCCCCEEEEECCEEccCCCHHHHHHHHHhcCCCCEEEE
Confidence 3688887532 3389999999999999999 99999999999999988889999999985 5789999
Q ss_pred EEecC
Q psy4596 345 TVCKG 349 (439)
Q Consensus 345 ~v~r~ 349 (439)
+|.|.
T Consensus 84 ~v~R~ 88 (90)
T 2eaq_A 84 DVRRY 88 (90)
T ss_dssp EEEEE
T ss_pred EEEeC
Confidence 99874
No 318
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=99.09 E-value=5.7e-10 Score=92.51 Aligned_cols=77 Identities=25% Similarity=0.470 Sum_probs=64.7
Q ss_pred eccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCC-Ce
Q psy4596 263 RQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRYSG-HQ 341 (439)
Q Consensus 263 ~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~-~~ 341 (439)
.....+|||.+.++. ...+++|..|.++|||+++| |++||+|++|||.++.++++.++..+|+... ..
T Consensus 16 ~~~~~g~G~~l~~~~----------~~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~ 84 (128)
T 2kjd_A 16 KKGPSGYGFNLHSDK----------SKPGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDET 84 (128)
T ss_dssp ECCSSSCCEEEEECS----------SSCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTTCSEE
T ss_pred ecCCCcccEEEEecC----------CCCCEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCE
Confidence 334567999997653 13489999999999999999 9999999999999999989999999999864 56
Q ss_pred EEEEEecCC
Q psy4596 342 ISLTVCKGF 350 (439)
Q Consensus 342 v~l~v~r~~ 350 (439)
+.|+|.|..
T Consensus 85 ~~l~v~R~g 93 (128)
T 2kjd_A 85 KLLVVDRET 93 (128)
T ss_dssp EEEEECHHH
T ss_pred EEEEEEeCC
Confidence 778888753
No 319
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.09 E-value=1.7e-10 Score=93.41 Aligned_cols=82 Identities=17% Similarity=0.248 Sum_probs=65.5
Q ss_pred eeeeeeccCc--ccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHH
Q psy4596 258 EITLIRQEGE--KLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTL 335 (439)
Q Consensus 258 ~v~l~~~~~~--~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l 335 (439)
.+.+.+.... .|||+|.+.... ...+++|..|.++|||+++| |++||+|++|||+++.++++.++.++|
T Consensus 18 ~v~l~k~~~~~~~~G~~v~~~~~~--------~~~gv~V~~V~~~spA~~aG-L~~GD~Il~Ing~~v~~~~~~~~~~~l 88 (114)
T 2d8i_A 18 SIHIEKSDTAADTYGFSLSSVEED--------GIRRLYVNSVKETGLASKKG-LKAGDEILEINNRAADALNSSMLKDFL 88 (114)
T ss_dssp EEEEECSCTTTCCCCCEEEEEEET--------TEEEEEEEECCTTSSHHHHT-CCTTCCEEEESSCBGGGCCHHHHHHHH
T ss_pred EEEEEeCCCCccccCEEEEecCcC--------CcCCEEEEEeCCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHH
Confidence 4445444442 689998763211 01379999999999999999 999999999999999999999999999
Q ss_pred hcCCCeEEEEEecCC
Q psy4596 336 RYSGHQISLTVCKGF 350 (439)
Q Consensus 336 ~~~~~~v~l~v~r~~ 350 (439)
+. ..+.|+|.|..
T Consensus 89 ~~--~~v~l~v~R~p 101 (114)
T 2d8i_A 89 SQ--PSLGLLVRTYP 101 (114)
T ss_dssp TS--SEEEEEEEECC
T ss_pred hC--CcEEEEEEECC
Confidence 86 48999998854
No 320
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=99.09 E-value=2.8e-09 Score=108.51 Aligned_cols=55 Identities=9% Similarity=0.066 Sum_probs=46.8
Q ss_pred CcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHhCCC-CeEEEEEe
Q psy4596 191 PGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALLEPC-PEILLKIQ 248 (439)
Q Consensus 191 ~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~-~~v~l~v~ 248 (439)
.+++|..|.++++|+..| ++.||+|++|||++|. +..++..++.++. ..+.|.+.
T Consensus 415 ~gVvvs~V~~~s~a~~~g-~~~gdiI~~vNg~~V~--s~~~l~~~l~~~k~~~l~~~~~ 470 (539)
T 4fln_A 415 QIVILSQVLANEVNIGYE-DMNNQQVLKFNGIPIR--NIHHLAHLIDMCKDKYLVFEFE 470 (539)
T ss_dssp CCEEEEEECCCGGGTTCS-SCCSEEEEEETTEECC--SHHHHHHHHHTCCSSEEEEEET
T ss_pred eEEEEEEecCCchhhhcC-CCCCCEEEeECCEEcC--CHHHHHHHHHHcCCCeEEEEEC
Confidence 489999999999999999 9999999999999999 7778888888764 44555554
No 321
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=99.09 E-value=1.2e-09 Score=84.97 Aligned_cols=70 Identities=21% Similarity=0.390 Sum_probs=60.1
Q ss_pred CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHhCCCCeEEEEEec
Q psy4596 170 PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALLEPCPEILLKIQH 249 (439)
Q Consensus 170 ~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l~v~r 249 (439)
.|||.+.. |++|..|.++|+|+++|+|++||+|++|||.++.++++.++...+...+..+.|+|.|
T Consensus 16 ~~g~~~~~--------------gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~r 81 (92)
T 3cyy_A 16 EYGLRLAS--------------HIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSKGKLKMVVQR 81 (92)
T ss_dssp CCCEEEEE--------------EEEEEEECTTCHHHHSCCCCTTCEEEEETTEECTTCCHHHHHHHHHTTTTEEEEEEEC
T ss_pred CCCEEEeC--------------CEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCcEEEEEEe
Confidence 78887652 6999999999999999999999999999999999999999998888777789999998
Q ss_pred CCCC
Q psy4596 250 DPHP 253 (439)
Q Consensus 250 ~~~~ 253 (439)
++..
T Consensus 82 ~g~~ 85 (92)
T 3cyy_A 82 DERA 85 (92)
T ss_dssp ----
T ss_pred CCce
Confidence 7643
No 322
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=99.08 E-value=5e-10 Score=84.73 Aligned_cols=67 Identities=22% Similarity=0.406 Sum_probs=59.1
Q ss_pred CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHhCCCCeEEEEEec
Q psy4596 170 PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALLEPCPEILLKIQH 249 (439)
Q Consensus 170 ~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l~v~r 249 (439)
.|||.+.. |++|..|.++|+|+++|+|++||+|++|||.++.++++.++...+......+.|+|.|
T Consensus 14 ~~g~~~~~--------------gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~R 79 (81)
T 2rcz_A 14 EYGLRLAS--------------HIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSKGKLKMVVQR 79 (81)
T ss_dssp CCCEEEEE--------------EEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTCCHHHHHHHHHTSTTEEEEEEEC
T ss_pred CCCEEEeC--------------CEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHCCCCeEEEEEEe
Confidence 77877652 6999999999999999989999999999999999999999998888766788899887
Q ss_pred C
Q psy4596 250 D 250 (439)
Q Consensus 250 ~ 250 (439)
+
T Consensus 80 ~ 80 (81)
T 2rcz_A 80 D 80 (81)
T ss_dssp -
T ss_pred C
Confidence 5
No 323
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.07 E-value=8.9e-10 Score=90.82 Aligned_cols=87 Identities=36% Similarity=0.505 Sum_probs=70.4
Q ss_pred eeEEEEEecCC---CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHH
Q psy4596 159 FLQDVVLPKSG---PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLA 235 (439)
Q Consensus 159 ~~~~v~l~~~~---~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~ 235 (439)
..+.+.+.+.+ .|||++....+.. ...|++|..|.++|||+++|+|++||+|++|||+++. ++.++..+
T Consensus 19 ~~~~~~~~~~~~~~~lG~~~~~~~~~~------~~~gv~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~--~~~~~~~~ 90 (124)
T 1wh1_A 19 ELEEVDLYRMNSQDKLGLTVCYRTDDE------DDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQ--NREEAVAL 90 (124)
T ss_dssp EECCBCCCCSSTTCCCCEEEECCCCCS------SCCCEEEEEECSSSHHHHTCCCCTTCEEEEESSCBCC--SHHHHHHH
T ss_pred eEEEEEEEecCCCCcccEEEEecCCCC------CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECC--CHHHHHHH
Confidence 44555565543 7999998765431 1358999999999999999999999999999999999 78888888
Q ss_pred HhCC-CCeEEEEEecCCCC
Q psy4596 236 LLEP-CPEILLKIQHDPHP 253 (439)
Q Consensus 236 l~~~-~~~v~l~v~r~~~~ 253 (439)
|... +..+.|+|.|++..
T Consensus 91 l~~~~g~~v~l~v~R~g~~ 109 (124)
T 1wh1_A 91 LTSEENKNFSLLIARPELQ 109 (124)
T ss_dssp HTCSSCCSCCEEEEECSSC
T ss_pred HHhCCCCEEEEEEEECCEE
Confidence 8763 67899999998754
No 324
>2lob_A Golgi-associated PDZ and coiled-coil motif-contai protein; structural protein-hydrolase complex, peptide binding protei; NMR {Homo sapiens}
Probab=98.62 E-value=1.9e-11 Score=98.92 Aligned_cols=81 Identities=42% Similarity=0.590 Sum_probs=66.9
Q ss_pred eeEEEEEecCC--CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhh-cCCCCCCCEEEEECCeeCCCCCHHHHHHH
Q psy4596 159 FLQDVVLPKSG--PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAAL-SGKLRMGDRILAVNGRDVSKVTHEEAVLA 235 (439)
Q Consensus 159 ~~~~v~l~~~~--~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~-~G~L~~GD~Il~VNg~~v~~~~~~~~~~~ 235 (439)
..+.|.|.+.. +|||++.++.+. ..|++|..|.++|||++ +| |++||+|++|||.++.++++.++...
T Consensus 27 ~~~~v~l~k~~~~glG~~l~~g~~~--------~~gv~V~~V~~~spA~~~aG-L~~GD~Il~ING~~v~~~~~~~~~~~ 97 (112)
T 2lob_A 27 GIRKVLLLKEDHEGLGISITGGKEH--------GVPILISEIHPGQPADRCGG-LHVGDAILAVNGVNLRDTKHKEAVTI 97 (112)
Confidence 34567777754 999999986542 23799999999999999 88 99999999999999988899999988
Q ss_pred HhCCCCeEEEEEe
Q psy4596 236 LLEPCPEILLKIQ 248 (439)
Q Consensus 236 l~~~~~~v~l~v~ 248 (439)
++..+..+.|+|.
T Consensus 98 l~~~~~~v~l~V~ 110 (112)
T 2lob_A 98 LSQQRGEIEFEVV 110 (112)
Confidence 8877666777664
No 325
>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=99.03 E-value=1e-09 Score=90.90 Aligned_cols=84 Identities=27% Similarity=0.419 Sum_probs=70.6
Q ss_pred ceeeeeeccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCC-CCCCEEEEECCEEcCCCCHHHHHHHH
Q psy4596 257 QEITLIRQEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRL-KVGMRLLEVNGMSLLGASHQEAVNTL 335 (439)
Q Consensus 257 ~~v~l~~~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L-~~GD~Il~VNg~~v~~~~~~~~~~~l 335 (439)
.++.+.+....+|||.+.... ...+++|..|.++|||+++| | ++||+|++|||+++.++++.++.++|
T Consensus 10 ~~v~l~~~~~~glG~~~~~~~----------~~~~~~V~~V~~~spA~~aG-ll~~GD~I~~ing~~v~~~~~~~~~~~l 78 (127)
T 1b8q_A 10 ISVRLFKRKVGGLGFLVKERV----------SKPPVIISDLIRGGAAEQSG-LIQAGDIILAVNDRPLVDLSYDSALEVL 78 (127)
T ss_dssp EEEEEECTTTSCCSCCEEECT----------TSSCEEECCCSSSSSHHHHS-SCCTTTCCCEETTEECSSSCHHHHHHHH
T ss_pred EEEEEEeCCCCcEeEEEEecC----------CCCCEEEEEeCCCCHHHHcC-CCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 455666665678999987643 12479999999999999999 7 99999999999999999999999999
Q ss_pred hc-CCCeEEEEEecCCc
Q psy4596 336 RY-SGHQISLTVCKGFE 351 (439)
Q Consensus 336 ~~-~~~~v~l~v~r~~~ 351 (439)
+. .+..+.|+|.|...
T Consensus 79 ~~~~g~~v~l~v~R~g~ 95 (127)
T 1b8q_A 79 RGIASETHVVLILRGPE 95 (127)
T ss_dssp HSCCSSCEEEEEECCCC
T ss_pred HhCCCCeEEEEEEeCCc
Confidence 97 45899999998754
No 326
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=99.01 E-value=8.8e-10 Score=110.27 Aligned_cols=81 Identities=36% Similarity=0.569 Sum_probs=73.0
Q ss_pred eEEEEEecCCCccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHhC-
Q psy4596 160 LQDVVLPKSGPLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALLE- 238 (439)
Q Consensus 160 ~~~v~l~~~~~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~- 238 (439)
++.|.+.+..+|||.+.++.+ .|++|..|.++|||+++| |++||+|++|||.++.++++.+++..|+.
T Consensus 2 ~r~V~l~k~~~lG~~i~gg~~----------~Gi~V~~V~~gspA~~aG-L~~GD~Il~VNG~~v~~~t~~e~~~~L~~~ 70 (468)
T 3shw_A 2 MKLVKFRKGDSVGLRLAGGND----------VGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLDL 70 (468)
T ss_dssp EEEEEEECCSSCCEEEEEETT----------TEEEEEEECSSSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHHS
T ss_pred ceEEEEecCCccceEEEccCc----------CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhc
Confidence 467888888899999988643 379999999999999999 99999999999999999999999999886
Q ss_pred -CCCeEEEEEecCC
Q psy4596 239 -PCPEILLKIQHDP 251 (439)
Q Consensus 239 -~~~~v~l~v~r~~ 251 (439)
.+..+.|+|.|++
T Consensus 71 ~~g~~v~L~V~r~g 84 (468)
T 3shw_A 71 PKGEEVTILAQKKK 84 (468)
T ss_dssp CTTSEEEEEEEECH
T ss_pred CCCCEEEEEEEECC
Confidence 7889999999875
No 327
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.01 E-value=1.8e-10 Score=92.99 Aligned_cols=77 Identities=23% Similarity=0.355 Sum_probs=64.5
Q ss_pred EEEEEecCC-CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHhCC
Q psy4596 161 QDVVLPKSG-PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALLEP 239 (439)
Q Consensus 161 ~~v~l~~~~-~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~ 239 (439)
+.|.|.+.+ .|||.+.+. .+++|..|.++++|+++| |++||+|++|||.++.+++|.++...+...
T Consensus 17 r~v~l~~~~~~~G~~l~~~------------~~v~V~~V~~~spA~~aG-L~~GD~Il~InG~~v~~~~~~d~~~~i~~~ 83 (111)
T 1vae_A 17 RGIHFTVEEGDLGFTLRGN------------TPVQVHFLDPHCSASLAG-AKEGDYIVSIQGVDCKWLTVSEVMKLLKSF 83 (111)
T ss_dssp CCCCEECCSSCCSCCEESS------------SSCEECCCCTTSSHHHHH-CCTTCEEEEETTEECSSCCHHHHHHHHHHT
T ss_pred eEEEEEcCCCcccEEEeCC------------CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 456677765 899988652 258999999999999999 999999999999999999999999888765
Q ss_pred C-CeEEEEEecC
Q psy4596 240 C-PEILLKIQHD 250 (439)
Q Consensus 240 ~-~~v~l~v~r~ 250 (439)
. ..+.|+|.|.
T Consensus 84 ~~~~v~l~V~~~ 95 (111)
T 1vae_A 84 GGEEVEMKVVSL 95 (111)
T ss_dssp TTSEECEEEECE
T ss_pred CCceEEEEEEec
Confidence 4 4588888765
No 328
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=98.99 E-value=1.5e-09 Score=107.08 Aligned_cols=82 Identities=35% Similarity=0.538 Sum_probs=73.3
Q ss_pred eeEEEEEecCCCccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHh-
Q psy4596 159 FLQDVVLPKSGPLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALL- 237 (439)
Q Consensus 159 ~~~~v~l~~~~~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~- 237 (439)
..+.+.+.+.++|||++.++.+ .|++|..|.++|||+++| |++||+|++|||.++.++++.+++..++
T Consensus 9 ~~~~v~~~k~~~lG~~i~gg~~----------~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~e~~~~l~~ 77 (391)
T 3tsz_A 9 SMKLVKFRKGDSVGLRLAGGND----------VGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLD 77 (391)
T ss_dssp CEEEEEEECCSSCCEEEEEETT----------TEEEEEEECTTCHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHH
T ss_pred CcEEEEeecCCceeEEEEecCC----------CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 4567888888899999998643 379999999999999999 9999999999999999999999999988
Q ss_pred -CCCCeEEEEEecCC
Q psy4596 238 -EPCPEILLKIQHDP 251 (439)
Q Consensus 238 -~~~~~v~l~v~r~~ 251 (439)
..+..+.|+|.|++
T Consensus 78 ~~~g~~v~l~v~r~~ 92 (391)
T 3tsz_A 78 LPKGEEVTILAQKKK 92 (391)
T ss_dssp SCTTSEEEEEEEECH
T ss_pred hcCCCeEEEEEeeCC
Confidence 47889999999875
No 329
>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.99 E-value=9e-10 Score=91.17 Aligned_cols=85 Identities=33% Similarity=0.448 Sum_probs=72.1
Q ss_pred eeEEEEEecCC--CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCC-CCCCEEEEECCeeCCCCCHHHHHHH
Q psy4596 159 FLQDVVLPKSG--PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKL-RMGDRILAVNGRDVSKVTHEEAVLA 235 (439)
Q Consensus 159 ~~~~v~l~~~~--~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L-~~GD~Il~VNg~~v~~~~~~~~~~~ 235 (439)
+.+.|.+.+.. +|||.+....+ ..+++|..|.++|+|+++| | ++||+|++|||.++.++++.++...
T Consensus 8 ~~~~v~l~~~~~~glG~~~~~~~~---------~~~~~V~~V~~~spA~~aG-ll~~GD~I~~ing~~v~~~~~~~~~~~ 77 (127)
T 1b8q_A 8 NVISVRLFKRKVGGLGFLVKERVS---------KPPVIISDLIRGGAAEQSG-LIQAGDIILAVNDRPLVDLSYDSALEV 77 (127)
T ss_dssp CSEEEEEECTTTSCCSCCEEECTT---------SSCEEECCCSSSSSHHHHS-SCCTTTCCCEETTEECSSSCHHHHHHH
T ss_pred ceEEEEEEeCCCCcEeEEEEecCC---------CCCEEEEEeCCCCHHHHcC-CCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 45678887764 89999987543 2479999999999999999 8 9999999999999998889999988
Q ss_pred HhC-CCCeEEEEEecCCCC
Q psy4596 236 LLE-PCPEILLKIQHDPHP 253 (439)
Q Consensus 236 l~~-~~~~v~l~v~r~~~~ 253 (439)
++. .+..+.|+|.|++..
T Consensus 78 l~~~~g~~v~l~v~R~g~~ 96 (127)
T 1b8q_A 78 LRGIASETHVVLILRGPEG 96 (127)
T ss_dssp HHSCCSSCEEEEEECCCCS
T ss_pred HHhCCCCeEEEEEEeCCce
Confidence 875 467899999998754
No 330
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=98.98 E-value=9.8e-10 Score=109.94 Aligned_cols=72 Identities=28% Similarity=0.533 Sum_probs=66.1
Q ss_pred CcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhc--CCCeEE
Q psy4596 266 GEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRY--SGHQIS 343 (439)
Q Consensus 266 ~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~--~~~~v~ 343 (439)
...|||.+.++. ..|+||..|.+||||+++| |++||+|++|||.++.++++.+++.+|+. .+..++
T Consensus 10 ~~~lG~~i~gg~-----------~~Gi~V~~V~~gspA~~aG-L~~GD~Il~VNG~~v~~~t~~e~~~~L~~~~~g~~v~ 77 (468)
T 3shw_A 10 GDSVGLRLAGGN-----------DVGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVT 77 (468)
T ss_dssp CSSCCEEEEEET-----------TTEEEEEEECSSSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHHSCTTSEEE
T ss_pred CCccceEEEccC-----------cCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEE
Confidence 377999998764 3589999999999999999 99999999999999999999999999998 789999
Q ss_pred EEEecC
Q psy4596 344 LTVCKG 349 (439)
Q Consensus 344 l~v~r~ 349 (439)
|+|.|.
T Consensus 78 L~V~r~ 83 (468)
T 3shw_A 78 ILAQKK 83 (468)
T ss_dssp EEEEEC
T ss_pred EEEEEC
Confidence 999985
No 331
>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.96 E-value=2.2e-09 Score=87.53 Aligned_cols=64 Identities=17% Similarity=0.290 Sum_probs=58.1
Q ss_pred CCCeEEEEeCC--CCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCeEEEEEecCCccC
Q psy4596 289 DEGVFITKINS--GGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRYSGHQISLTVCKGFERG 353 (439)
Q Consensus 289 ~~gi~I~~v~~--~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l~v~r~~~~~ 353 (439)
..+++|..|.+ ++||+++| |++||+|++|||.++.+++|.++..+|+..+..+.|+|.|.....
T Consensus 43 ~~gv~V~~V~~~~~spA~~aG-L~~GD~Il~Vng~~v~~~~~~dl~~~l~~~g~~v~l~v~R~g~~~ 108 (118)
T 2yub_A 43 ATTVQVKEVNRMHISPNNRNA-IHPGDRILEINGTPVRTLRVEEVEDAIKQTSQTLQLLIEHDPVPQ 108 (118)
T ss_dssp CCEEEEEECCTTTSCTTHHHH-CCTTCCEEEESSSBTTTSCHHHHHHHHHCCSSCEEEEEEECSSCC
T ss_pred CCcEEEEEecCCCCChHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHHhCCCEEEEEEEECCEEE
Confidence 35899999999 99999999 999999999999999999999999999987889999999875433
No 332
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=98.96 E-value=1.5e-09 Score=106.98 Aligned_cols=71 Identities=27% Similarity=0.510 Sum_probs=65.0
Q ss_pred cccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhc--CCCeEEE
Q psy4596 267 EKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRY--SGHQISL 344 (439)
Q Consensus 267 ~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~--~~~~v~l 344 (439)
.+|||++.++. ..|++|..|.+||||+++| |++||+|++|||.++.++++++++.+|+. .|..+.|
T Consensus 19 ~~lG~~i~gg~-----------~~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~e~~~~l~~~~~g~~v~l 86 (391)
T 3tsz_A 19 DSVGLRLAGGN-----------DVGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTI 86 (391)
T ss_dssp SSCCEEEEEET-----------TTEEEEEEECTTCHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHHSCTTSEEEE
T ss_pred CceeEEEEecC-----------CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhhcCCCeEEE
Confidence 46999998754 3589999999999999999 99999999999999999999999999995 7889999
Q ss_pred EEecC
Q psy4596 345 TVCKG 349 (439)
Q Consensus 345 ~v~r~ 349 (439)
+|.|.
T Consensus 87 ~v~r~ 91 (391)
T 3tsz_A 87 LAQKK 91 (391)
T ss_dssp EEEEC
T ss_pred EEeeC
Confidence 99986
No 333
>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell projection, disease mutation, membrane, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=98.95 E-value=6.5e-10 Score=100.35 Aligned_cols=83 Identities=31% Similarity=0.434 Sum_probs=71.3
Q ss_pred eeEEEEEecCC-CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHh
Q psy4596 159 FLQDVVLPKSG-PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALL 237 (439)
Q Consensus 159 ~~~~v~l~~~~-~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~ 237 (439)
..+.|+|.+.. +|||.+.+..+ ..|++|..|.++|+|+++| |++||+|++|||.+|.++++.++...+.
T Consensus 9 ~~r~v~l~k~~~glG~~l~~~~~---------~~gv~V~~V~~gSpA~~aG-L~~GD~Il~VNG~~V~~~s~~dl~~~l~ 78 (216)
T 2krg_A 9 RPRLCTMKKGPSGYGFNLHSDKS---------KPGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIR 78 (216)
T ss_dssp CCEEEEEECCSSSSCEEECCCSS---------SCSCBEEEECTTSHHHHHT-CCTTCBCCEETTEECTTCCTHHHHHHHH
T ss_pred ceEEEEEEeCCCCceEEEEecCC---------CCCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 56778888876 99999987543 2379999999999999999 9999999999999999999999998887
Q ss_pred CCCCeE-EEEEecCC
Q psy4596 238 EPCPEI-LLKIQHDP 251 (439)
Q Consensus 238 ~~~~~v-~l~v~r~~ 251 (439)
..+..+ .|+|.|++
T Consensus 79 ~~g~~v~~l~V~R~g 93 (216)
T 2krg_A 79 AGGDETKLLVVDRET 93 (216)
T ss_dssp HHCSEEEEEECCHHH
T ss_pred hcCCeEEEEEEEECC
Confidence 657778 88887765
No 334
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.93 E-value=5.1e-09 Score=86.22 Aligned_cols=76 Identities=28% Similarity=0.533 Sum_probs=63.4
Q ss_pred cccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcC-CCeEEEE
Q psy4596 267 EKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRYS-GHQISLT 345 (439)
Q Consensus 267 ~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~-~~~v~l~ 345 (439)
..|||.+...... ....+++|..|.++|||+++|+|++||+|++|||+++. ++.++..+|+.. +..+.|+
T Consensus 32 ~~lG~~~~~~~~~-------~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~--~~~~~~~~l~~~~g~~v~l~ 102 (124)
T 1wh1_A 32 DKLGLTVCYRTDD-------EDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQ--NREEAVALLTSEENKNFSLL 102 (124)
T ss_dssp CCCCEEEECCCCC-------SSCCCEEEEEECSSSHHHHTCCCCTTCEEEEESSCBCC--SHHHHHHHHTCSSCCSCCEE
T ss_pred CcccEEEEecCCC-------CCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECC--CHHHHHHHHHhCCCCEEEEE
Confidence 4689998764321 11358999999999999999999999999999999996 579999999984 6899999
Q ss_pred EecCCc
Q psy4596 346 VCKGFE 351 (439)
Q Consensus 346 v~r~~~ 351 (439)
|.|...
T Consensus 103 v~R~g~ 108 (124)
T 1wh1_A 103 IARPEL 108 (124)
T ss_dssp EEECSS
T ss_pred EEECCE
Confidence 998753
No 335
>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell projection, disease mutation, membrane, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=98.91 E-value=1.5e-09 Score=97.95 Aligned_cols=75 Identities=25% Similarity=0.494 Sum_probs=64.5
Q ss_pred ccCcccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCeE-
Q psy4596 264 QEGEKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRYSGHQI- 342 (439)
Q Consensus 264 ~~~~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v- 342 (439)
....+|||.+.++. ...|++|..|.++|+|+++| |++||+|++|||++|.++++.+++.+|+..+..+
T Consensus 17 k~~~glG~~l~~~~----------~~~gv~V~~V~~gSpA~~aG-L~~GD~Il~VNG~~V~~~s~~dl~~~l~~~g~~v~ 85 (216)
T 2krg_A 17 KGPSGYGFNLHSDK----------SKPGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDETK 85 (216)
T ss_dssp CCSSSSCEEECCCS----------SSCSCBEEEECTTSHHHHHT-CCTTCBCCEETTEECTTCCTHHHHHHHHHHCSEEE
T ss_pred eCCCCceEEEEecC----------CCCCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhcCCeEE
Confidence 33467999997753 13389999999999999999 9999999999999999889999999999878888
Q ss_pred EEEEecC
Q psy4596 343 SLTVCKG 349 (439)
Q Consensus 343 ~l~v~r~ 349 (439)
.|+|.|.
T Consensus 86 ~l~V~R~ 92 (216)
T 2krg_A 86 LLVVDRE 92 (216)
T ss_dssp EEECCHH
T ss_pred EEEEEEC
Confidence 8888654
No 336
>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.90 E-value=1.2e-08 Score=83.03 Aligned_cols=62 Identities=27% Similarity=0.405 Sum_probs=56.3
Q ss_pred CcEEEEEECC--CChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHhCCCCeEEEEEecCCCC
Q psy4596 191 PGIFISHIVP--GGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALLEPCPEILLKIQHDPHP 253 (439)
Q Consensus 191 ~g~~V~~V~~--~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l~v~r~~~~ 253 (439)
.|++|..|.+ ++||+++| |++||+|++|||.++.++++.++...+...+..+.|+|.|++..
T Consensus 44 ~gv~V~~V~~~~~spA~~aG-L~~GD~Il~Vng~~v~~~~~~dl~~~l~~~g~~v~l~v~R~g~~ 107 (118)
T 2yub_A 44 TTVQVKEVNRMHISPNNRNA-IHPGDRILEINGTPVRTLRVEEVEDAIKQTSQTLQLLIEHDPVP 107 (118)
T ss_dssp CEEEEEECCTTTSCTTHHHH-CCTTCCEEEESSSBTTTSCHHHHHHHHHCCSSCEEEEEEECSSC
T ss_pred CcEEEEEecCCCCChHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHHhCCCEEEEEEEECCEE
Confidence 4899999999 99999999 99999999999999998877999988886677899999998765
No 337
>3i18_A LMO2051 protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.70A {Listeria monocytogenes} PDB: 2kjk_A 3i1e_A
Probab=98.85 E-value=2e-08 Score=79.31 Aligned_cols=60 Identities=17% Similarity=0.239 Sum_probs=52.5
Q ss_pred CCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHhC--CCCeEEEEEecCCCC
Q psy4596 190 KPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALLE--PCPEILLKIQHDPHP 253 (439)
Q Consensus 190 ~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~--~~~~v~l~v~r~~~~ 253 (439)
..|++|..|.++|||+. | |++||+|++|||.++. ++.++...+.. .+..+.|+|.|++..
T Consensus 6 ~~Gv~V~~V~~~spA~~-G-L~~GD~I~~Ing~~v~--~~~dl~~~l~~~~~g~~v~l~v~R~g~~ 67 (100)
T 3i18_A 6 YDGVYVMSVKDDVPAAD-V-LHAGDLITEIDGNAFK--SSQEFIDYIHSKKVGDTVKINYKHGDKN 67 (100)
T ss_dssp CCCEEEEEECTTSGGGG-T-CCTTCEEEEETTBCCS--SHHHHHHHHHTSCTTCEEEEEEEETTEE
T ss_pred CCCEEEEEeCCCCchHH-C-CCCCCEEEEECCEECC--CHHHHHHHHHhCCCCCEEEEEEEECCEE
Confidence 45899999999999995 9 9999999999999999 77888777764 578899999998754
No 338
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=98.85 E-value=5.6e-09 Score=87.15 Aligned_cols=81 Identities=14% Similarity=0.196 Sum_probs=63.3
Q ss_pred CCccEEEeeCCC---CCCCCCCCC---CCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHhC--CC
Q psy4596 169 GPLGFSIIGGTD---HSCIPFGQH---KPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALLE--PC 240 (439)
Q Consensus 169 ~~lG~~i~~~~~---~~~~~~g~~---~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~--~~ 240 (439)
+.||+.+..... .....+|++ ..|++|..|.++|||+ +| |++||+|++|||.++. ++.++...+.. .+
T Consensus 29 ~~LGv~~~~~~~~~~~~~~~lgl~~~~~~g~~V~~V~~~spA~-aG-L~~GD~I~~inG~~v~--~~~~l~~~l~~~~~g 104 (134)
T 2l97_A 29 PALGIQMVNLSNVSTSDIRRLNIPSNVTSGVIVRSVQSNMPAN-GH-LEKYDVITKVDDKEIA--SSTDLQSALYNHSIG 104 (134)
T ss_dssp CCCCCEEEESSSSCHHHHHHHSSCSSSCSCEEEEECSTTSGGG-TT-SCSSCEEEEETTEECC--CHHHHHHHHHHSSTT
T ss_pred eEeeEEEEECCchhHHHHHHcCCCcCCCCCEEEEEECCCCchH-HC-CCCCCEEEEECCEEcC--CHHHHHHHHHhCCCC
Confidence 578988877653 112223443 3589999999999999 99 9999999999999999 67777766653 57
Q ss_pred CeEEEEEecCCCC
Q psy4596 241 PEILLKIQHDPHP 253 (439)
Q Consensus 241 ~~v~l~v~r~~~~ 253 (439)
..+.|+|.|++..
T Consensus 105 ~~v~l~v~R~g~~ 117 (134)
T 2l97_A 105 DTIKITYYRNGKE 117 (134)
T ss_dssp CEEEEEEEETTEE
T ss_pred CEEEEEEEECCEE
Confidence 8999999998743
No 339
>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}
Probab=98.80 E-value=2.3e-09 Score=86.59 Aligned_cols=79 Identities=23% Similarity=0.358 Sum_probs=61.9
Q ss_pred CccEEEeeCCCCCCCCCCC-------CCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHhCCCCe
Q psy4596 170 PLGFSIIGGTDHSCIPFGQ-------HKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALLEPCPE 242 (439)
Q Consensus 170 ~lG~~i~~~~~~~~~~~g~-------~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~ 242 (439)
.||+.+...++.....|+. ...|++|..|.++|||+++| |++||+|++|||.++. ++.++...+. .+..
T Consensus 7 ~lGi~~~~l~~~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~--~~~~~~~~l~-~g~~ 82 (112)
T 2p3w_A 7 FIGIRMRTITPSLVDELKASNPDFPEVSSGIYVQEVAPNSPSQRGG-IQDGDIIVKVNGRPLV--DSSELQEAVL-TESP 82 (112)
T ss_dssp ECCEEEEECCHHHHHHHHHHCTTC--CCSSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECC--SHHHHHHHHH-HCSS
T ss_pred eeeEEEecCCHHHHHHhcccCcCcccCCCCeEEEEECCCChHHHCC-CCCCCEEEEECCEECC--CHHHHHHHHh-CCCe
Confidence 5788888765433222221 13589999999999999999 9999999999999999 6777776664 4678
Q ss_pred EEEEEecCCC
Q psy4596 243 ILLKIQHDPH 252 (439)
Q Consensus 243 v~l~v~r~~~ 252 (439)
+.|+|.|++.
T Consensus 83 v~l~v~R~g~ 92 (112)
T 2p3w_A 83 LLLEVRRGND 92 (112)
T ss_dssp EEEEEEETTE
T ss_pred EEEEEEECCE
Confidence 9999999864
No 340
>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}
Probab=98.79 E-value=3.7e-09 Score=81.95 Aligned_cols=58 Identities=22% Similarity=0.418 Sum_probs=51.4
Q ss_pred cEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHhC--CCCeEEEEEecCCCC
Q psy4596 192 GIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALLE--PCPEILLKIQHDPHP 253 (439)
Q Consensus 192 g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~--~~~~v~l~v~r~~~~ 253 (439)
|++|..|.++|||++ | |++||+|++|||.++. ++.++...+.. .+..+.|+|.|++..
T Consensus 2 Gv~V~~V~~~spA~~-G-L~~GD~I~~InG~~v~--~~~~l~~~l~~~~~g~~v~l~v~R~g~~ 61 (91)
T 2kjp_A 2 GIYASSVVENMPAKG-K-IEVGDKIISADGKNYQ--SAEKLIDYISSKKAGDKVTLKIEREEKE 61 (91)
T ss_dssp CSSCCCCCCSSCCSS-C-CCSSCEEEEETTBCCS--SHHHHHHHHSSCCSSCEECEEEESSSCE
T ss_pred ceEEEEECCCChHHH-c-CCCCCEEEEECCEECC--CHHHHHHHHHcCCCCCEEEEEEEECCEE
Confidence 578899999999999 9 9999999999999999 77888888875 478899999998765
No 341
>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4
Probab=98.77 E-value=6.5e-09 Score=84.04 Aligned_cols=81 Identities=21% Similarity=0.311 Sum_probs=62.3
Q ss_pred CCccEEEeeCCCCCCCCCCC-------CCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHhCCCC
Q psy4596 169 GPLGFSIIGGTDHSCIPFGQ-------HKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALLEPCP 241 (439)
Q Consensus 169 ~~lG~~i~~~~~~~~~~~g~-------~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~ 241 (439)
+.||+.+....+.....++. ...|++|..|.++|||+++| |++||+|++|||.++. ++.++...+.. +.
T Consensus 6 ~~lGi~~~~l~~~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~--~~~~~~~~l~~-~~ 81 (113)
T 2pzd_A 6 RYIGVMMLTLSPSILAELQLREPSFPDVQHGVLIHKVILGSPAHRAG-LRPGDVILAIGEQMVQ--NAEDVYEAVRT-QS 81 (113)
T ss_dssp EECCEEEEECCHHHHHHHHHHCSSCCCCSSCEEEEEEBTTSHHHHHT-CCTTCEEEEETTEECC--SHHHHHHHHHH-CS
T ss_pred cEeEEEEEeCCHHHHHHhccccccccCCCCCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECC--CHHHHHHHHhC-CC
Confidence 35788887754322221211 23589999999999999999 9999999999999999 67777777765 67
Q ss_pred eEEEEEecCCCC
Q psy4596 242 EILLKIQHDPHP 253 (439)
Q Consensus 242 ~v~l~v~r~~~~ 253 (439)
.+.|+|.|++..
T Consensus 82 ~v~l~v~R~g~~ 93 (113)
T 2pzd_A 82 QLAVQIRRGRET 93 (113)
T ss_dssp SEEEEEEETTEE
T ss_pred eEEEEEEECCEE
Confidence 899999997643
No 342
>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}
Probab=98.64 E-value=1.7e-08 Score=78.13 Aligned_cols=57 Identities=14% Similarity=0.385 Sum_probs=50.6
Q ss_pred CeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcC--CCeEEEEEecCCc
Q psy4596 291 GVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRYS--GHQISLTVCKGFE 351 (439)
Q Consensus 291 gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~--~~~v~l~v~r~~~ 351 (439)
|++|..|.++|||++ | |++||+|++|||.++.+ ..++..+|+.. +..+.|+|.|...
T Consensus 2 Gv~V~~V~~~spA~~-G-L~~GD~I~~InG~~v~~--~~~l~~~l~~~~~g~~v~l~v~R~g~ 60 (91)
T 2kjp_A 2 GIYASSVVENMPAKG-K-IEVGDKIISADGKNYQS--AEKLIDYISSKKAGDKVTLKIEREEK 60 (91)
T ss_dssp CSSCCCCCCSSCCSS-C-CCSSCEEEEETTBCCSS--HHHHHHHHSSCCSSCEECEEEESSSC
T ss_pred ceEEEEECCCChHHH-c-CCCCCEEEEECCEECCC--HHHHHHHHHcCCCCCEEEEEEEECCE
Confidence 688999999999999 9 99999999999999964 58999999874 7899999998754
No 343
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=98.61 E-value=2.2e-07 Score=89.28 Aligned_cols=82 Identities=22% Similarity=0.300 Sum_probs=68.8
Q ss_pred CCccEEEeeCCCCCCCCCCCC-CCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHhC--CCCeEEE
Q psy4596 169 GPLGFSIIGGTDHSCIPFGQH-KPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALLE--PCPEILL 245 (439)
Q Consensus 169 ~~lG~~i~~~~~~~~~~~g~~-~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~--~~~~v~l 245 (439)
+.||+.+.......+..++++ ..|++|..|.++|||+++| |++||+|++|||+++. ++.++...+.. .+..+.|
T Consensus 221 ~~lGi~~~~~~~~~~~~~g~~~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~--~~~~l~~~l~~~~~g~~v~l 297 (318)
T 1te0_A 221 GYIGIGGREIAPLHAQGGGIDQLQGIVVNEVSPDGPAANAG-IQVNDLIISVDNKPAI--SALETMDQVAEIRPGSVIPV 297 (318)
T ss_dssp EECCEEEEECSCCCSSSSCSSSCCCEEEEEECTTSTTTTTC-CCTTCCEEEETTEECC--CHHHHHHHHHTSCTTCEEEE
T ss_pred ccceeEeeecchhHHHhccCCCCCcEEEEEeCCCChHHHCC-CCCCCEEEEECCEEcC--CHHHHHHHHHhcCCCCEEEE
Confidence 378999888766666666654 3589999999999999999 9999999999999999 67777777764 5789999
Q ss_pred EEecCCCC
Q psy4596 246 KIQHDPHP 253 (439)
Q Consensus 246 ~v~r~~~~ 253 (439)
+|.|++..
T Consensus 298 ~v~R~g~~ 305 (318)
T 1te0_A 298 VVMRDDKQ 305 (318)
T ss_dssp EEESSSCE
T ss_pred EEEECCEE
Confidence 99998754
No 344
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=98.59 E-value=1.5e-07 Score=73.47 Aligned_cols=57 Identities=16% Similarity=0.220 Sum_probs=49.8
Q ss_pred EEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHhC-C-CCeEEEEEecCCC
Q psy4596 193 IFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALLE-P-CPEILLKIQHDPH 252 (439)
Q Consensus 193 ~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~-~-~~~v~l~v~r~~~ 252 (439)
.+|..|.++|||+++| |++||+|++|||+++. ++.++...+.. . +..+.|+|.|++.
T Consensus 4 p~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~--~~~d~~~~l~~~~~~~~v~l~v~R~g~ 62 (95)
T 3id1_A 4 PVVGEIAANSIAAEAQ-IAPGTELKAVDGIETP--DWDAVRLQLVDKIGDESTTITVAPFGS 62 (95)
T ss_dssp CBEEEECTTSHHHHTT-CCTTCEEEEETTEECS--SHHHHHHHHHHTTTCSEEEEEEECTTC
T ss_pred CEEEeeCCCCHHHHcC-CCCCCEEEEECCEECC--CHHHHHHHHHHhcCCCcEEEEEEECCC
Confidence 4789999999999999 9999999999999999 78888877753 2 3689999999874
No 345
>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4
Probab=98.59 E-value=1.3e-07 Score=76.29 Aligned_cols=59 Identities=25% Similarity=0.458 Sum_probs=52.6
Q ss_pred CCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCeEEEEEecCCc
Q psy4596 289 DEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRYSGHQISLTVCKGFE 351 (439)
Q Consensus 289 ~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l~v~r~~~ 351 (439)
..|++|..|.++|||+++| |++||+|++|||+++. +..++...|+. +..+.|++.|+..
T Consensus 34 ~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~--~~~~~~~~l~~-~~~v~l~v~R~g~ 92 (113)
T 2pzd_A 34 QHGVLIHKVILGSPAHRAG-LRPGDVILAIGEQMVQ--NAEDVYEAVRT-QSQLAVQIRRGRE 92 (113)
T ss_dssp SSCEEEEEEBTTSHHHHHT-CCTTCEEEEETTEECC--SHHHHHHHHHH-CSSEEEEEEETTE
T ss_pred CCCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECC--CHHHHHHHHhC-CCeEEEEEEECCE
Confidence 4589999999999999999 9999999999999996 56888888887 6899999998643
No 346
>3i18_A LMO2051 protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.70A {Listeria monocytogenes} PDB: 2kjk_A 3i1e_A
Probab=98.59 E-value=1.7e-07 Score=73.84 Aligned_cols=59 Identities=20% Similarity=0.356 Sum_probs=51.2
Q ss_pred CCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhc--CCCeEEEEEecCCc
Q psy4596 289 DEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRY--SGHQISLTVCKGFE 351 (439)
Q Consensus 289 ~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~--~~~~v~l~v~r~~~ 351 (439)
..|++|..|.++|||+. | |++||+|++|||+++. ++.++...|.. .+..+.|+|.|...
T Consensus 6 ~~Gv~V~~V~~~spA~~-G-L~~GD~I~~Ing~~v~--~~~dl~~~l~~~~~g~~v~l~v~R~g~ 66 (100)
T 3i18_A 6 YDGVYVMSVKDDVPAAD-V-LHAGDLITEIDGNAFK--SSQEFIDYIHSKKVGDTVKINYKHGDK 66 (100)
T ss_dssp CCCEEEEEECTTSGGGG-T-CCTTCEEEEETTBCCS--SHHHHHHHHHTSCTTCEEEEEEEETTE
T ss_pred CCCEEEEEeCCCCchHH-C-CCCCCEEEEECCEECC--CHHHHHHHHHhCCCCCEEEEEEEECCE
Confidence 45899999999999995 8 9999999999999995 45888888886 46899999998643
No 347
>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}
Probab=98.58 E-value=6.5e-08 Score=75.37 Aligned_cols=60 Identities=18% Similarity=0.380 Sum_probs=52.1
Q ss_pred CCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhc--CCCeEEEEEecCCcc
Q psy4596 289 DEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRY--SGHQISLTVCKGFER 352 (439)
Q Consensus 289 ~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~--~~~~v~l~v~r~~~~ 352 (439)
..|++|..|.++|||++ | |++||+|++|||.++.+ ..++..+|+. .+..+.|+|.|....
T Consensus 4 ~~Gv~V~~V~~~spA~~-G-L~~GD~Il~InG~~v~~--~~~l~~~l~~~~~g~~v~l~v~R~g~~ 65 (94)
T 2kl1_A 4 AKGVYVMSVLPNMPAAG-R-LEAGDRIAAIDGQPINT--SEQIVSYVREKQAGDRVRVTFIRDRKQ 65 (94)
T ss_dssp CCCEECCCCCTTSTTBT-T-BCTTCEEEEETTBCCCC--HHHHHHHHHHSCTTCCEEEEEEETTEE
T ss_pred CCcEEEEEECCCChHHh-C-CCCCCEEEEECCEECCC--HHHHHHHHHhCCCCCEEEEEEEECCEE
Confidence 44899999999999998 8 99999999999999964 5888888886 478999999987543
No 348
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=98.58 E-value=9.2e-08 Score=92.79 Aligned_cols=81 Identities=23% Similarity=0.431 Sum_probs=66.3
Q ss_pred CccEEEeeCCCCCCCCCCCC-CCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHhC--CCCeEEEE
Q psy4596 170 PLGFSIIGGTDHSCIPFGQH-KPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALLE--PCPEILLK 246 (439)
Q Consensus 170 ~lG~~i~~~~~~~~~~~g~~-~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~--~~~~v~l~ 246 (439)
.||+.+...+...+..++++ ..|++|..|.++|||+++| |++||+|++|||+++. ++.++...+.. .++.+.|+
T Consensus 241 ~lGv~~~~~~~~~a~~~gl~~~~G~~V~~V~~~spA~~aG-L~~GDvI~~ing~~v~--~~~~l~~~l~~~~~g~~v~l~ 317 (345)
T 3stj_A 241 LLGIKGTEMSADIAKAFNLDVQRGAFVSEVLPGSGSAKAG-VKAGDIITSLNGKPLN--SFAELRSRIATTEPGTKVKLG 317 (345)
T ss_dssp ECCEEEEECCHHHHHHTTCSCCSSEEEEEECTTSHHHHHT-CCTTCEECEETTEECS--CHHHHHHHHHTSCTTCEEEEE
T ss_pred ccceeeEeecHHHHHhcCCCCCceEEEEEeccCChHHHcC-CCCCCEEEEECCEECC--CHHHHHHHHHhcCCCCEEEEE
Confidence 67887776654444445554 3589999999999999999 9999999999999999 77788777764 68899999
Q ss_pred EecCCCC
Q psy4596 247 IQHDPHP 253 (439)
Q Consensus 247 v~r~~~~ 253 (439)
|.|++..
T Consensus 318 v~R~g~~ 324 (345)
T 3stj_A 318 LLRNGKP 324 (345)
T ss_dssp EEETTEE
T ss_pred EEECCEE
Confidence 9998754
No 349
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=98.57 E-value=1.1e-07 Score=72.95 Aligned_cols=58 Identities=22% Similarity=0.234 Sum_probs=50.0
Q ss_pred cEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHhC--CCCeEEEEEecCCC
Q psy4596 192 GIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALLE--PCPEILLKIQHDPH 252 (439)
Q Consensus 192 g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~--~~~~v~l~v~r~~~ 252 (439)
|+.|..+.|+|+|+++| |++||+|++|||.++. ++.++...+.. .+..+.|+|.|++.
T Consensus 20 G~~V~~~~~~s~A~~aG-l~~GD~I~~ing~~v~--~~~d~~~~~~~~~~g~~v~l~v~R~g~ 79 (87)
T 2i6v_A 20 GYRVSPGKDPVLFESIG-LQDGDMAVALNGLDLT--DPNVMNTLFQSMNEMTEMSLTVERDGQ 79 (87)
T ss_dssp EEEEEECSCHHHHHHTT-CCTTCEEEEETTEETT--CHHHHHHHHHTGGGCSEEEEEEEETTE
T ss_pred EEEEEeCCCCCHHHHCC-CCCCCEEEEECCEECC--CHHHHHHHHHhcCCCCEEEEEEEECCE
Confidence 67888889999999999 9999999999999999 77777766653 46789999999863
No 350
>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}
Probab=98.56 E-value=7.9e-08 Score=74.87 Aligned_cols=59 Identities=27% Similarity=0.442 Sum_probs=51.5
Q ss_pred CcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHhC--CCCeEEEEEecCCCC
Q psy4596 191 PGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALLE--PCPEILLKIQHDPHP 253 (439)
Q Consensus 191 ~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~--~~~~v~l~v~r~~~~ 253 (439)
.|++|..|.++|||++ | |++||+|++|||.++. ++.++...+.. .+..+.|+|.|++..
T Consensus 5 ~Gv~V~~V~~~spA~~-G-L~~GD~Il~InG~~v~--~~~~l~~~l~~~~~g~~v~l~v~R~g~~ 65 (94)
T 2kl1_A 5 KGVYVMSVLPNMPAAG-R-LEAGDRIAAIDGQPIN--TSEQIVSYVREKQAGDRVRVTFIRDRKQ 65 (94)
T ss_dssp CCEECCCCCTTSTTBT-T-BCTTCEEEEETTBCCC--CHHHHHHHHHHSCTTCCEEEEEEETTEE
T ss_pred CcEEEEEECCCChHHh-C-CCCCCEEEEECCEECC--CHHHHHHHHHhCCCCCEEEEEEEECCEE
Confidence 4799999999999999 9 9999999999999999 67777777764 588999999998754
No 351
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=98.54 E-value=2.3e-07 Score=77.30 Aligned_cols=58 Identities=17% Similarity=0.216 Sum_probs=51.1
Q ss_pred CCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhc--CCCeEEEEEecCCc
Q psy4596 290 EGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRY--SGHQISLTVCKGFE 351 (439)
Q Consensus 290 ~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~--~~~~v~l~v~r~~~ 351 (439)
.|++|..|.++|||+ +| |++||+|++|||.++.+ ..++...|.. .++.+.|+|.|...
T Consensus 57 ~g~~V~~V~~~spA~-aG-L~~GD~I~~inG~~v~~--~~~l~~~l~~~~~g~~v~l~v~R~g~ 116 (134)
T 2l97_A 57 SGVIVRSVQSNMPAN-GH-LEKYDVITKVDDKEIAS--STDLQSALYNHSIGDTIKITYYRNGK 116 (134)
T ss_dssp SCEEEEECSTTSGGG-TT-SCSSCEEEEETTEECCC--HHHHHHHHHHSSTTCEEEEEEEETTE
T ss_pred CCEEEEEECCCCchH-HC-CCCCCEEEEECCEEcCC--HHHHHHHHHhCCCCCEEEEEEEECCE
Confidence 489999999999999 99 99999999999999965 4788888876 47899999998653
No 352
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=98.52 E-value=2.4e-07 Score=72.27 Aligned_cols=56 Identities=18% Similarity=0.174 Sum_probs=48.6
Q ss_pred eEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcC-C-CeEEEEEecCC
Q psy4596 292 VFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRYS-G-HQISLTVCKGF 350 (439)
Q Consensus 292 i~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~-~-~~v~l~v~r~~ 350 (439)
.+|..|.++|||+++| |++||+|++|||+.+. ++.++...|... + ..+.|+|.|..
T Consensus 4 p~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~--~~~d~~~~l~~~~~~~~v~l~v~R~g 61 (95)
T 3id1_A 4 PVVGEIAANSIAAEAQ-IAPGTELKAVDGIETP--DWDAVRLQLVDKIGDESTTITVAPFG 61 (95)
T ss_dssp CBEEEECTTSHHHHTT-CCTTCEEEEETTEECS--SHHHHHHHHHHTTTCSEEEEEEECTT
T ss_pred CEEEeeCCCCHHHHcC-CCCCCEEEEECCEECC--CHHHHHHHHHHhcCCCcEEEEEEECC
Confidence 4789999999999999 9999999999999995 558888888753 3 68999999864
No 353
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=98.52 E-value=1.6e-07 Score=71.97 Aligned_cols=57 Identities=19% Similarity=0.149 Sum_probs=49.1
Q ss_pred CeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhc--CCCeEEEEEecCC
Q psy4596 291 GVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRY--SGHQISLTVCKGF 350 (439)
Q Consensus 291 gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~--~~~~v~l~v~r~~ 350 (439)
|+.|..+.|+|+|+++| |++||+|++|||+++. ++.++.++++. .+..+.|+|.|..
T Consensus 20 G~~V~~~~~~s~A~~aG-l~~GD~I~~ing~~v~--~~~d~~~~~~~~~~g~~v~l~v~R~g 78 (87)
T 2i6v_A 20 GYRVSPGKDPVLFESIG-LQDGDMAVALNGLDLT--DPNVMNTLFQSMNEMTEMSLTVERDG 78 (87)
T ss_dssp EEEEEECSCHHHHHHTT-CCTTCEEEEETTEETT--CHHHHHHHHHTGGGCSEEEEEEEETT
T ss_pred EEEEEeCCCCCHHHHCC-CCCCCEEEEECCEECC--CHHHHHHHHHhcCCCCEEEEEEEECC
Confidence 67888888999999999 9999999999999995 45888887775 4689999998864
No 354
>2zpm_A Regulator of sigma E protease; metalloproteinase, membrane protein, PDZ domain, hydrolase, inner membrane, membrane, metal-binding; HET: MLY MSE; 0.98A {Escherichia coli} PDB: 3id2_A 3id3_A 3id4_A
Probab=98.49 E-value=2.1e-07 Score=71.91 Aligned_cols=59 Identities=25% Similarity=0.526 Sum_probs=50.4
Q ss_pred cEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHhC-CCCeEEEEEecCCCC
Q psy4596 192 GIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALLE-PCPEILLKIQHDPHP 253 (439)
Q Consensus 192 g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~-~~~~v~l~v~r~~~~ 253 (439)
.++|..|.++|+|+++| |++||+|++|||.++. ++.++...+.. .+..+.|++.|++..
T Consensus 5 ~~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~--~~~~~~~~l~~~~g~~v~l~v~R~g~~ 64 (91)
T 2zpm_A 5 EPVLENVQPNSAASXAG-LQAGDRIVXVDGQPLT--QWVTFVMLVRDNPGXSLALEIERQGSP 64 (91)
T ss_dssp -CBCSEECTTSHHHHTT-CCTTCEEEEETTEECC--CHHHHHHHHHHCTTCCEEEEEEETTEE
T ss_pred CeEEEEECCCChHHhcC-CCCCCEEEEECCeEcC--CHHHHHHHHhcCCCCeEEEEEEECCeE
Confidence 36788999999999999 9999999999999999 77888777763 567899999998743
No 355
>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}
Probab=98.49 E-value=2.8e-07 Score=74.16 Aligned_cols=58 Identities=21% Similarity=0.459 Sum_probs=51.1
Q ss_pred CCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCeEEEEEecCC
Q psy4596 289 DEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRYSGHQISLTVCKGF 350 (439)
Q Consensus 289 ~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l~v~r~~ 350 (439)
..|++|..|.++|||+++| |++||+|++|||+++. +..++...|+ .+..+.|+|.|..
T Consensus 34 ~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~--~~~~~~~~l~-~g~~v~l~v~R~g 91 (112)
T 2p3w_A 34 SSGIYVQEVAPNSPSQRGG-IQDGDIIVKVNGRPLV--DSSELQEAVL-TESPLLLEVRRGN 91 (112)
T ss_dssp CSSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECC--SHHHHHHHHH-HCSSEEEEEEETT
T ss_pred CCCeEEEEECCCChHHHCC-CCCCCEEEEECCEECC--CHHHHHHHHh-CCCeEEEEEEECC
Confidence 3589999999999999999 9999999999999996 4588888885 4788999998864
No 356
>2zpm_A Regulator of sigma E protease; metalloproteinase, membrane protein, PDZ domain, hydrolase, inner membrane, membrane, metal-binding; HET: MLY MSE; 0.98A {Escherichia coli} PDB: 3id2_A 3id3_A 3id4_A
Probab=98.45 E-value=2.6e-07 Score=71.36 Aligned_cols=57 Identities=23% Similarity=0.353 Sum_probs=49.4
Q ss_pred CeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhc-CCCeEEEEEecCC
Q psy4596 291 GVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRY-SGHQISLTVCKGF 350 (439)
Q Consensus 291 gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~-~~~~v~l~v~r~~ 350 (439)
.++|..|.++|||+++| |++||+|++|||.++. ++.++...|+. .+..+.|++.|..
T Consensus 5 ~~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~--~~~~~~~~l~~~~g~~v~l~v~R~g 62 (91)
T 2zpm_A 5 EPVLENVQPNSAASXAG-LQAGDRIVXVDGQPLT--QWVTFVMLVRDNPGXSLALEIERQG 62 (91)
T ss_dssp -CBCSEECTTSHHHHTT-CCTTCEEEEETTEECC--CHHHHHHHHHHCTTCCEEEEEEETT
T ss_pred CeEEEEECCCChHHhcC-CCCCCEEEEECCeEcC--CHHHHHHHHhcCCCCeEEEEEEECC
Confidence 46789999999999999 9999999999999996 55888888876 4678999998864
No 357
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=98.42 E-value=6.2e-07 Score=71.27 Aligned_cols=58 Identities=22% Similarity=0.237 Sum_probs=47.1
Q ss_pred cEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHh--CCCCeEEEEEecCCC
Q psy4596 192 GIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALL--EPCPEILLKIQHDPH 252 (439)
Q Consensus 192 g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~--~~~~~v~l~v~r~~~ 252 (439)
|++|..+.|+|+|+++| |++||+|++|||.++.++ .++...+. ..+..+.|+|.|++.
T Consensus 38 G~~V~~~~pas~A~~aG-l~~GDvI~~ing~~v~~~--~d~~~~~~~~~~g~~v~l~v~R~g~ 97 (105)
T 2i4s_A 38 GYRVSPGKDPVLFESIG-LQDGDMAVALNGLDLTDP--NVMNTLFQSMNEMTEMSLTVERDGQ 97 (105)
T ss_dssp EEEEEECSCTHHHHHHT-CCTTCEEEEETTEETTST--THHHHHHHHHTTCSEEEEEEEETTE
T ss_pred EEEEecCCCCCHHHHcC-CCCCCEEEEECCEECCCH--HHHHHHHHhcCCCCeEEEEEEECCE
Confidence 57788888888999999 999999999999999955 44444444 467889999999864
No 358
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=98.41 E-value=3.8e-07 Score=87.81 Aligned_cols=80 Identities=21% Similarity=0.330 Sum_probs=61.8
Q ss_pred CccEEEeeCCCCCCCCCCCC-------CCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHhCCCCe
Q psy4596 170 PLGFSIIGGTDHSCIPFGQH-------KPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALLEPCPE 242 (439)
Q Consensus 170 ~lG~~i~~~~~~~~~~~g~~-------~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~ 242 (439)
.+|+.+....+.....++.. ..|++|..|.++|||+++| |++||+|++|||+++. ++.++...+.. ++.
T Consensus 228 ~lGv~~~~l~~~~~~~~~l~~~~~~~~~~gv~V~~V~~~spA~~aG-l~~GDvI~~ing~~v~--~~~~l~~~l~~-~~~ 303 (325)
T 1lcy_A 228 YIGVMMLTLSPSILAELQLREPSFPDVQHGVLIHKVILGSPAHRAG-LRPGDVILAIGEQMVQ--NAEDVYEAVRT-QSQ 303 (325)
T ss_dssp ECCEEEEECCHHHHHHHTTSCTTSCCCSSCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECC--SHHHHHHHHTT-CSS
T ss_pred ccceEeecCCHHHHHhhCccccccccCCCCeEEEEeCcCChHHHCC-CCCCCEEEEECCEEcC--CHHHHHHHHhC-CCe
Confidence 46777766543222222221 3589999999999999999 9999999999999999 77888877765 588
Q ss_pred EEEEEecCCCC
Q psy4596 243 ILLKIQHDPHP 253 (439)
Q Consensus 243 v~l~v~r~~~~ 253 (439)
+.|+|.|++..
T Consensus 304 v~l~v~R~g~~ 314 (325)
T 1lcy_A 304 LAVQIRRGRET 314 (325)
T ss_dssp EEEEEEETTEE
T ss_pred EEEEEEECCEE
Confidence 99999998744
No 359
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=98.36 E-value=5.9e-07 Score=71.40 Aligned_cols=57 Identities=19% Similarity=0.155 Sum_probs=47.6
Q ss_pred CeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhc--CCCeEEEEEecCC
Q psy4596 291 GVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRY--SGHQISLTVCKGF 350 (439)
Q Consensus 291 gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~--~~~~v~l~v~r~~ 350 (439)
|++|..+.|+|+|+++| |++||+|++|||+++.++ .++..+++. .+..+.|+|.|..
T Consensus 38 G~~V~~~~pas~A~~aG-l~~GDvI~~ing~~v~~~--~d~~~~~~~~~~g~~v~l~v~R~g 96 (105)
T 2i4s_A 38 GYRVSPGKDPVLFESIG-LQDGDMAVALNGLDLTDP--NVMNTLFQSMNEMTEMSLTVERDG 96 (105)
T ss_dssp EEEEEECSCTHHHHHHT-CCTTCEEEEETTEETTST--THHHHHHHHHTTCSEEEEEEEETT
T ss_pred EEEEecCCCCCHHHHcC-CCCCCEEEEECCEECCCH--HHHHHHHHhcCCCCeEEEEEEECC
Confidence 56788888888889999 999999999999999766 666666664 5689999998864
No 360
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=98.36 E-value=1.5e-06 Score=83.37 Aligned_cols=60 Identities=17% Similarity=0.366 Sum_probs=53.2
Q ss_pred CCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhc--CCCeEEEEEecCCc
Q psy4596 289 DEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRY--SGHQISLTVCKGFE 351 (439)
Q Consensus 289 ~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~--~~~~v~l~v~r~~~ 351 (439)
..|++|..|.++|||+++| |++||+|++|||+++.+ ..++...|+. .++.+.|+|.|...
T Consensus 243 ~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~--~~~l~~~l~~~~~g~~v~l~v~R~g~ 304 (318)
T 1te0_A 243 LQGIVVNEVSPDGPAANAG-IQVNDLIISVDNKPAIS--ALETMDQVAEIRPGSVIPVVVMRDDK 304 (318)
T ss_dssp CCCEEEEEECTTSTTTTTC-CCTTCCEEEETTEECCC--HHHHHHHHHTSCTTCEEEEEEESSSC
T ss_pred CCcEEEEEeCCCChHHHCC-CCCCCEEEEECCEEcCC--HHHHHHHHHhcCCCCEEEEEEEECCE
Confidence 4589999999999999999 99999999999999954 5888888885 67899999998754
No 361
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=98.32 E-value=2.6e-06 Score=81.95 Aligned_cols=60 Identities=27% Similarity=0.390 Sum_probs=52.6
Q ss_pred CcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHhC--CCCeEEEEEec-CCCC
Q psy4596 191 PGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALLE--PCPEILLKIQH-DPHP 253 (439)
Q Consensus 191 ~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~--~~~~v~l~v~r-~~~~ 253 (439)
.|++|..|.++|||+++| |++||+|++|||+++. ++.++...+.. .+..+.|+|.| ++..
T Consensus 242 ~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~--~~~~l~~~l~~~~~g~~v~l~v~R~~g~~ 304 (324)
T 1y8t_A 242 LGAKIVEVVAGGAAANAG-VPKGVVVTKVDDRPIN--SADALVAAVRSKAPGATVALTFQDPSGGS 304 (324)
T ss_dssp SSEEEEEECTTSTTTTTT-CCTTCEEEEETTEECC--SHHHHHHHHHTSCTTCEEEEEEECSSCCE
T ss_pred CceEEEEECCCChHHHcC-CCCCCEEEEECCEECC--CHHHHHHHHHhcCCCCEEEEEEEECCCCE
Confidence 479999999999999999 9999999999999999 77777777753 57889999999 7643
No 362
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=98.29 E-value=7.9e-07 Score=86.21 Aligned_cols=60 Identities=22% Similarity=0.422 Sum_probs=53.7
Q ss_pred CCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhc--CCCeEEEEEecCCc
Q psy4596 289 DEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRY--SGHQISLTVCKGFE 351 (439)
Q Consensus 289 ~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~--~~~~v~l~v~r~~~ 351 (439)
..|++|..|.++|||+++| |++||+|++|||+++. +..++...|+. .++.+.|+|.|...
T Consensus 262 ~~G~~V~~V~~~spA~~aG-L~~GDvI~~ing~~v~--~~~~l~~~l~~~~~g~~v~l~v~R~g~ 323 (345)
T 3stj_A 262 QRGAFVSEVLPGSGSAKAG-VKAGDIITSLNGKPLN--SFAELRSRIATTEPGTKVKLGLLRNGK 323 (345)
T ss_dssp CSSEEEEEECTTSHHHHHT-CCTTCEECEETTEECS--CHHHHHHHHHTSCTTCEEEEEEEETTE
T ss_pred CceEEEEEeccCChHHHcC-CCCCCEEEEECCEECC--CHHHHHHHHHhcCCCCEEEEEEEECCE
Confidence 4589999999999999999 9999999999999995 55899888876 67999999999754
No 363
>1fc6_A Photosystem II D1 protease; D1 C-terminal processing protease, serine protease, serine- lysine catalytic DYAD, PDZ domain, photosynthesis; 1.80A {Scenedesmus obliquus} SCOP: b.36.1.3 c.14.1.2 PDB: 1fc9_A 1fc7_A 1fcf_A
Probab=98.26 E-value=2.4e-06 Score=84.28 Aligned_cols=75 Identities=19% Similarity=0.301 Sum_probs=62.1
Q ss_pred cccceeecCCccCCCCCCCCCCCCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhc-CCCeEEEE
Q psy4596 267 EKLGMHIKGGLRGQRGNPLDKNDEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRY-SGHQISLT 345 (439)
Q Consensus 267 ~~lG~~i~~~~~~~~g~~~~~~~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~-~~~~v~l~ 345 (439)
.++|+.+.... ....+++|..|.++|||+++| |++||+|++|||+++.+++..++..+|+. .+..|.|+
T Consensus 85 ~giG~~~~~~~---------~~~~~~~V~~v~~~spA~~aG-l~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~g~~v~l~ 154 (388)
T 1fc6_A 85 TGVGLEITYDG---------GSGKDVVVLTPAPGGPAEKAG-ARAGDVIVTVDGTAVKGMSLYDVSDLLQGEADSQVEVV 154 (388)
T ss_dssp BBCSEEEEECT---------TCSSCEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHCBSTTCEEEEE
T ss_pred EEEEEEEEEee---------cCCCcEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcCCCCEEEEE
Confidence 45787775320 013479999999999999999 99999999999999999988999999985 56889999
Q ss_pred EecCCc
Q psy4596 346 VCKGFE 351 (439)
Q Consensus 346 v~r~~~ 351 (439)
|.|...
T Consensus 155 v~r~g~ 160 (388)
T 1fc6_A 155 LHAPGA 160 (388)
T ss_dssp EEETTE
T ss_pred EEeCCC
Confidence 988643
No 364
>2hga_A Conserved protein MTH1368; GFT structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: b.36.1.6
Probab=98.26 E-value=3.4e-06 Score=69.10 Aligned_cols=57 Identities=26% Similarity=0.253 Sum_probs=49.9
Q ss_pred CcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHh--CCCCeEEEEEecCCC
Q psy4596 191 PGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALL--EPCPEILLKIQHDPH 252 (439)
Q Consensus 191 ~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~--~~~~~v~l~v~r~~~ 252 (439)
.|++|..|.++|||+++ |++||+|++|||.++. ++.++...+. ..+..+.|+| |++.
T Consensus 25 ~gv~V~~V~~~spA~~a--L~~GD~Il~InG~~v~--~~~dl~~~l~~~~~g~~v~l~V-R~g~ 83 (125)
T 2hga_A 25 DGVQIDSVVPGSPASKV--LTPGLVIESINGMPTS--NLTTYSAALKTISVGEVINITT-DQGT 83 (125)
T ss_dssp CCEEEEEECSSSGGGGT--SCTTCEEEEETTEECS--SHHHHHHHHTTCCTTCEEEEEE-TTEE
T ss_pred CceEEEEECCCChHHHh--cCCCCEEEEECCEEcC--CHHHHHHHHHhcCCCCEEEEEE-ECCE
Confidence 47999999999999998 9999999999999999 7788887776 3578899999 8764
No 365
>1fc6_A Photosystem II D1 protease; D1 C-terminal processing protease, serine protease, serine- lysine catalytic DYAD, PDZ domain, photosynthesis; 1.80A {Scenedesmus obliquus} SCOP: b.36.1.3 c.14.1.2 PDB: 1fc9_A 1fc7_A 1fcf_A
Probab=98.24 E-value=4.8e-06 Score=82.10 Aligned_cols=74 Identities=22% Similarity=0.306 Sum_probs=61.2
Q ss_pred CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHh-CCCCeEEEEEe
Q psy4596 170 PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALL-EPCPEILLKIQ 248 (439)
Q Consensus 170 ~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~-~~~~~v~l~v~ 248 (439)
++|+.+..... ...+++|..|.++|||+++| |++||+|++|||+++.+++..++...++ ..+..+.|+|.
T Consensus 86 giG~~~~~~~~--------~~~~~~V~~v~~~spA~~aG-l~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~g~~v~l~v~ 156 (388)
T 1fc6_A 86 GVGLEITYDGG--------SGKDVVVLTPAPGGPAEKAG-ARAGDVIVTVDGTAVKGMSLYDVSDLLQGEADSQVEVVLH 156 (388)
T ss_dssp BCSEEEEECTT--------CSSCEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHCBSTTCEEEEEEE
T ss_pred EEEEEEEEeec--------CCCcEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcCCCCEEEEEEE
Confidence 68888875310 12369999999999999999 9999999999999999887788887776 35788999999
Q ss_pred cCCC
Q psy4596 249 HDPH 252 (439)
Q Consensus 249 r~~~ 252 (439)
|++.
T Consensus 157 r~g~ 160 (388)
T 1fc6_A 157 APGA 160 (388)
T ss_dssp ETTE
T ss_pred eCCC
Confidence 9765
No 366
>2hga_A Conserved protein MTH1368; GFT structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: b.36.1.6
Probab=98.23 E-value=4.3e-06 Score=68.50 Aligned_cols=58 Identities=24% Similarity=0.337 Sum_probs=49.8
Q ss_pred CCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhc--CCCeEEEEEecCCc
Q psy4596 289 DEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRY--SGHQISLTVCKGFE 351 (439)
Q Consensus 289 ~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~--~~~~v~l~v~r~~~ 351 (439)
..+++|..|.++|||+++ |++||+|++|||.++.+ +.++...|+. .+..+.|+| |...
T Consensus 24 ~~gv~V~~V~~~spA~~a--L~~GD~Il~InG~~v~~--~~dl~~~l~~~~~g~~v~l~V-R~g~ 83 (125)
T 2hga_A 24 PDGVQIDSVVPGSPASKV--LTPGLVIESINGMPTSN--LTTYSAALKTISVGEVINITT-DQGT 83 (125)
T ss_dssp CCCEEEEEECSSSGGGGT--SCTTCEEEEETTEECSS--HHHHHHHHTTCCTTCEEEEEE-TTEE
T ss_pred CCceEEEEECCCChHHHh--cCCCCEEEEECCEEcCC--HHHHHHHHHhcCCCCEEEEEE-ECCE
Confidence 348999999999999998 99999999999999964 5888888874 578999999 7543
No 367
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=98.21 E-value=3.2e-06 Score=82.10 Aligned_cols=77 Identities=27% Similarity=0.400 Sum_probs=60.2
Q ss_pred CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCC-----------CCEEEEECCeeCCCCCHHHHHHHHhC
Q psy4596 170 PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRM-----------GDRILAVNGRDVSKVTHEEAVLALLE 238 (439)
Q Consensus 170 ~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~-----------GD~Il~VNg~~v~~~~~~~~~~~l~~ 238 (439)
.||+.+.... ....++. .|++|..|.++|||+++| |++ ||+|++|||+++. ++.++...+..
T Consensus 234 ~lGi~~~~~~--~~~~~~~--~Gv~V~~V~~~spA~~AG-l~~~~~~~~~~l~~GDvI~~ing~~v~--~~~dl~~~l~~ 306 (348)
T 3qo6_A 234 ILGIKFAPDQ--SVEQLGV--SGVLVLDAPPSGPAGKAG-LQSTKRDGYGRLVLGDIITSVNGTKVS--NGSDLYRILDQ 306 (348)
T ss_dssp ECCCEECCTT--TTTTTTC--SSEEEEECCSSSHHHHHT-CCCCEECSSSCEECCCEECEETTBCCS--SSHHHHHHHTT
T ss_pred ecCcEEccch--hhhhcCC--ceEEEEEecCCChHHHcC-CccccccccCCCCCCCEEEEECCEEeC--CHHHHHHHHHh
Confidence 5666665321 1222232 589999999999999999 999 9999999999999 66777777753
Q ss_pred --CCCeEEEEEecCCCC
Q psy4596 239 --PCPEILLKIQHDPHP 253 (439)
Q Consensus 239 --~~~~v~l~v~r~~~~ 253 (439)
.++.+.|+|.|++..
T Consensus 307 ~~~g~~v~l~v~R~g~~ 323 (348)
T 3qo6_A 307 CKVGDEVTVEVLRGDHK 323 (348)
T ss_dssp CCTTCEEEEEEECSSSE
T ss_pred CCCcCEEEEEEEECCEE
Confidence 578999999998754
No 368
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=98.14 E-value=7.9e-06 Score=78.54 Aligned_cols=59 Identities=24% Similarity=0.349 Sum_probs=51.7
Q ss_pred CCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhc--CCCeEEEEEec-CC
Q psy4596 289 DEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRY--SGHQISLTVCK-GF 350 (439)
Q Consensus 289 ~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~--~~~~v~l~v~r-~~ 350 (439)
..+++|..|.++|||+++| |++||+|++|||+++.+ +.++...|.. .++.+.|+|.| ..
T Consensus 241 ~~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~l~~~l~~~~~g~~v~l~v~R~~g 302 (324)
T 1y8t_A 241 TLGAKIVEVVAGGAAANAG-VPKGVVVTKVDDRPINS--ADALVAAVRSKAPGATVALTFQDPSG 302 (324)
T ss_dssp SSSEEEEEECTTSTTTTTT-CCTTCEEEEETTEECCS--HHHHHHHHHTSCTTCEEEEEEECSSC
T ss_pred CCceEEEEECCCChHHHcC-CCCCCEEEEECCEECCC--HHHHHHHHHhcCCCCEEEEEEEECCC
Confidence 3489999999999999999 99999999999999964 4788888875 57899999998 53
No 369
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=98.10 E-value=3.8e-07 Score=88.09 Aligned_cols=80 Identities=16% Similarity=0.304 Sum_probs=0.0
Q ss_pred CccEEEeeCCCCCCCCCC-----C--CCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHhCCCCe
Q psy4596 170 PLGFSIIGGTDHSCIPFG-----Q--HKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALLEPCPE 242 (439)
Q Consensus 170 ~lG~~i~~~~~~~~~~~g-----~--~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~ 242 (439)
.||+.+..........++ . ...|++|..|.++|||+++| |++||+|++|||+++. ++.++...+.. +..
T Consensus 226 ~lGi~~~~~~~~~~~~~~~~~~~~~~~~~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~--~~~~~~~~l~~-~~~ 301 (332)
T 3num_A 226 YIGIRMMSLTSSKAKELKDRHRDFPDVISGAYIIEVIPDTPAEAGG-LKENDVIISINGQSVV--SANDVSDVIKR-EST 301 (332)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccceEEEecCHHHhhhhhhhccccCCCCCceEEEEeccCCChHHcC-CCCCCEEEEECCEECC--CHHHHHHHHhC-CCe
Confidence 567766654432222111 1 12489999999999999999 9999999999999998 66666666654 778
Q ss_pred EEEEEecCCCC
Q psy4596 243 ILLKIQHDPHP 253 (439)
Q Consensus 243 v~l~v~r~~~~ 253 (439)
+.|+|.|++..
T Consensus 302 v~l~v~R~g~~ 312 (332)
T 3num_A 302 LNMVVRRGNED 312 (332)
T ss_dssp -----------
T ss_pred EEEEEEECCEE
Confidence 99999998765
No 370
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=98.10 E-value=6.1e-06 Score=79.32 Aligned_cols=59 Identities=25% Similarity=0.458 Sum_probs=52.6
Q ss_pred CCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCeEEEEEecCCc
Q psy4596 289 DEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRYSGHQISLTVCKGFE 351 (439)
Q Consensus 289 ~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l~v~r~~~ 351 (439)
..|++|.+|.++|||+++| |++||+|++|||+++. +..++.+.|+. ++.+.|+|.|+..
T Consensus 255 ~~gv~V~~V~~~spA~~aG-l~~GDvI~~ing~~v~--~~~~l~~~l~~-~~~v~l~v~R~g~ 313 (325)
T 1lcy_A 255 QHGVLIHKVILGSPAHRAG-LRPGDVILAIGEQMVQ--NAEDVYEAVRT-QSQLAVQIRRGRE 313 (325)
T ss_dssp SSCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECC--SHHHHHHHHTT-CSSEEEEEEETTE
T ss_pred CCCeEEEEeCcCChHHHCC-CCCCCEEEEECCEEcC--CHHHHHHHHhC-CCeEEEEEEECCE
Confidence 3589999999999999999 9999999999999995 55889888887 6899999998753
No 371
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=98.09 E-value=5.9e-06 Score=85.68 Aligned_cols=58 Identities=17% Similarity=0.255 Sum_probs=48.5
Q ss_pred cEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHh--CCCCeEEEEEecCCCC
Q psy4596 192 GIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALL--EPCPEILLKIQHDPHP 253 (439)
Q Consensus 192 g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~--~~~~~v~l~v~r~~~~ 253 (439)
|++|..|.++|||+++| |++||+|++|||.+|.. .++...+. +.++.+.|+|.|++..
T Consensus 497 gv~V~~V~~~spA~~AG-L~~GD~I~aInG~~v~~---~~l~~~l~~~~~g~~v~l~v~R~g~~ 556 (597)
T 4fgm_A 497 GLDVLNVYHDESAYHAG-LSAGDKIIAIDHLQATE---QSVKRILERYIPGDTVTIHAFRRDEL 556 (597)
T ss_dssp EEEEEEECTTSHHHHHT-CCTTCEEEEETTEECCT---TTHHHHHTTCCTTCEEEEEEEETTEE
T ss_pred eEEEEEeCCCChHHHCC-CCCCCEEEEECCEECCH---HHHHHHHHhcCCCCEEEEEEEECCEE
Confidence 78999999999999999 99999999999999953 33344444 4678999999998754
No 372
>3k50_A Putative S41 protease; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=97.98 E-value=6.9e-06 Score=80.93 Aligned_cols=74 Identities=20% Similarity=0.308 Sum_probs=55.6
Q ss_pred CccEEEeeCCCCCCCCCCCCCCcEEEEEECCCChhhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHhCCCCeEEEEEec
Q psy4596 170 PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPGGVAALSGKLRMGDRILAVNGRDVSKVTHEEAVLALLEPCPEILLKIQH 249 (439)
Q Consensus 170 ~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l~v~r 249 (439)
++||++....+.. ....++|..|.++|||+++| |++||+|++|||.++.++. +...++..+..+.|++.|
T Consensus 75 G~~~~l~~~~~~~------~~~~~~V~~V~~gsPA~~AG-L~~GD~I~~InG~~v~~~~---~~~~l~~~g~~v~l~v~R 144 (403)
T 3k50_A 75 GFDYTLYKVLDND------TAYNALISYVVPGSPAEEAG-LQRGHWIMMMNGDYITKKV---ESELLQGSTRQLQIGVYK 144 (403)
T ss_dssp SEEEEEEECTTCS------SCEEEEEEEECTTSHHHHTT-CCTTCEEEEETTBCBCTTT---GGGGTSCSCEEEEEEEEE
T ss_pred ceEEEEEEcCCCC------cceeEEEEEeCCCChHHHcC-CCCCCEEEEECCEEccchh---HHHHhhCCCCEEEEEEEe
Confidence 6777776543210 01137899999999999999 9999999999999999764 344455567789999988
Q ss_pred CCCC
Q psy4596 250 DPHP 253 (439)
Q Consensus 250 ~~~~ 253 (439)
++..
T Consensus 145 ~g~~ 148 (403)
T 3k50_A 145 EVVG 148 (403)
T ss_dssp EEC-
T ss_pred CCcc
Confidence 7654
No 373
>3k50_A Putative S41 protease; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=97.96 E-value=5.3e-06 Score=81.77 Aligned_cols=57 Identities=23% Similarity=0.320 Sum_probs=49.6
Q ss_pred CeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCeEEEEEecCCc
Q psy4596 291 GVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRYSGHQISLTVCKGFE 351 (439)
Q Consensus 291 gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l~v~r~~~ 351 (439)
.++|..|.++|||+++| |++||+|++|||+++.+++ +..+|+..+..++|++.|...
T Consensus 91 ~~~V~~V~~gsPA~~AG-L~~GD~I~~InG~~v~~~~---~~~~l~~~g~~v~l~v~R~g~ 147 (403)
T 3k50_A 91 NALISYVVPGSPAEEAG-LQRGHWIMMMNGDYITKKV---ESELLQGSTRQLQIGVYKEVV 147 (403)
T ss_dssp EEEEEEECTTSHHHHTT-CCTTCEEEEETTBCBCTTT---GGGGTSCSCEEEEEEEEEEEC
T ss_pred eEEEEEeCCCChHHHcC-CCCCCEEEEECCEEccchh---HHHHhhCCCCEEEEEEEeCCc
Confidence 37899999999999999 9999999999999998875 566677777899999988643
No 374
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=97.95 E-value=9.6e-06 Score=78.72 Aligned_cols=60 Identities=23% Similarity=0.436 Sum_probs=53.2
Q ss_pred CCeEEEEeCCCCchhhcCCCCC-----------CCEEEEECCEEcCCCCHHHHHHHHhc--CCCeEEEEEecCCcc
Q psy4596 290 EGVFITKINSGGAAKRDGRLKV-----------GMRLLEVNGMSLLGASHQEAVNTLRY--SGHQISLTVCKGFER 352 (439)
Q Consensus 290 ~gi~I~~v~~~s~A~~~G~L~~-----------GD~Il~VNg~~v~~~~~~~~~~~l~~--~~~~v~l~v~r~~~~ 352 (439)
.|++|..|.++|||+++| |++ ||+|++|||+++.++ .++...|.. .++.++|+|.|....
T Consensus 251 ~Gv~V~~V~~~spA~~AG-l~~~~~~~~~~l~~GDvI~~ing~~v~~~--~dl~~~l~~~~~g~~v~l~v~R~g~~ 323 (348)
T 3qo6_A 251 SGVLVLDAPPSGPAGKAG-LQSTKRDGYGRLVLGDIITSVNGTKVSNG--SDLYRILDQCKVGDEVTVEVLRGDHK 323 (348)
T ss_dssp SSEEEEECCSSSHHHHHT-CCCCEECSSSCEECCCEECEETTBCCSSS--HHHHHHHTTCCTTCEEEEEEECSSSE
T ss_pred ceEEEEEecCCChHHHcC-CccccccccCCCCCCCEEEEECCEEeCCH--HHHHHHHHhCCCcCEEEEEEEECCEE
Confidence 489999999999999999 999 999999999999766 888888865 578999999987543
No 375
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=97.94 E-value=1e-05 Score=83.92 Aligned_cols=59 Identities=15% Similarity=0.301 Sum_probs=49.7
Q ss_pred CCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhc--CCCeEEEEEecCCcc
Q psy4596 290 EGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRY--SGHQISLTVCKGFER 352 (439)
Q Consensus 290 ~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~--~~~~v~l~v~r~~~~ 352 (439)
.|++|..|.++|||+++| |++||+|++|||..|.. .++.+.|+. .+..|.|+|.|+...
T Consensus 496 ~gv~V~~V~~~spA~~AG-L~~GD~I~aInG~~v~~---~~l~~~l~~~~~g~~v~l~v~R~g~~ 556 (597)
T 4fgm_A 496 QGLDVLNVYHDESAYHAG-LSAGDKIIAIDHLQATE---QSVKRILERYIPGDTVTIHAFRRDEL 556 (597)
T ss_dssp TEEEEEEECTTSHHHHHT-CCTTCEEEEETTEECCT---TTHHHHHTTCCTTCEEEEEEEETTEE
T ss_pred CeEEEEEeCCCChHHHCC-CCCCCEEEEECCEECCH---HHHHHHHHhcCCCCEEEEEEEECCEE
Confidence 379999999999999999 99999999999999943 455556654 678999999997543
No 376
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=97.73 E-value=4.2e-06 Score=80.72 Aligned_cols=59 Identities=22% Similarity=0.417 Sum_probs=0.0
Q ss_pred CCCeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCeEEEEEecCCc
Q psy4596 289 DEGVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLLGASHQEAVNTLRYSGHQISLTVCKGFE 351 (439)
Q Consensus 289 ~~gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~l~v~r~~~ 351 (439)
..|++|..|.++|||+++| |++||+|++|||+++. ++.++...|+. +..+.|+|.|...
T Consensus 253 ~~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~--~~~~~~~~l~~-~~~v~l~v~R~g~ 311 (332)
T 3num_A 253 ISGAYIIEVIPDTPAEAGG-LKENDVIISINGQSVV--SANDVSDVIKR-ESTLNMVVRRGNE 311 (332)
T ss_dssp ---------------------------------------------------------------
T ss_pred CCceEEEEeccCCChHHcC-CCCCCEEEEECCEECC--CHHHHHHHHhC-CCeEEEEEEECCE
Confidence 3489999999999999999 9999999999999995 44788888876 7889999988643
No 377
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=96.94 E-value=0.0013 Score=73.02 Aligned_cols=58 Identities=14% Similarity=0.197 Sum_probs=50.4
Q ss_pred CCeEEEEeCCC--------CchhhcC-CCCCCCEEEEECCEEcCCCCHHHHHHHHhc-CCCeEEEEEecCC
Q psy4596 290 EGVFITKINSG--------GAAKRDG-RLKVGMRLLEVNGMSLLGASHQEAVNTLRY-SGHQISLTVCKGF 350 (439)
Q Consensus 290 ~gi~I~~v~~~--------s~A~~~G-~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~-~~~~v~l~v~r~~ 350 (439)
.+++|..|.++ |||+++| .|+ ||+|++|||+++.++. ++..+|+. .+..|.|+|.|..
T Consensus 748 ~~~~v~~v~~~~~~~~~~~spa~~ag~~l~-GD~I~~i~g~~~~~~~--~~~~~~~~~~g~~v~l~v~r~~ 815 (1045)
T 1k32_A 748 DHYVVAKAYAGDYSNEGEKSPIFEYGIDPT-GYLIEDIDGETVGAGS--NIYRVLSEKAGTSARIRLSGKG 815 (1045)
T ss_dssp TEEEEEEECBSCTTSTTCBCGGGGGTCCCT-TCEEEEETTEECBTTB--CHHHHHHTTTTSEEEEEEECSS
T ss_pred CEEEEEEecCCCcccccCCChHHHCCCCcC-CCEEEEECCEEccchh--hHHHhhcCCCCCEEEEEEECCC
Confidence 47899999998 9999999 489 9999999999998874 77888886 6789999998853
No 378
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=96.85 E-value=0.0029 Score=70.22 Aligned_cols=68 Identities=10% Similarity=0.081 Sum_probs=54.6
Q ss_pred CccEEEeeCCCCCCCCCCCCCCcEEEEEECCC--------ChhhhcC-CCCCCCEEEEECCeeCCCCCHHHHHHHHh-CC
Q psy4596 170 PLGFSIIGGTDHSCIPFGQHKPGIFISHIVPG--------GVAALSG-KLRMGDRILAVNGRDVSKVTHEEAVLALL-EP 239 (439)
Q Consensus 170 ~lG~~i~~~~~~~~~~~g~~~~g~~V~~V~~~--------s~A~~~G-~L~~GD~Il~VNg~~v~~~~~~~~~~~l~-~~ 239 (439)
++|+.+... ..+++|..|.++ |||+++| .|+ ||+|++|||+++.++. ++...+. ..
T Consensus 738 g~G~~~~~~-----------~~~~~v~~v~~~~~~~~~~~spa~~ag~~l~-GD~I~~i~g~~~~~~~--~~~~~~~~~~ 803 (1045)
T 1k32_A 738 RIACDFKLD-----------GDHYVVAKAYAGDYSNEGEKSPIFEYGIDPT-GYLIEDIDGETVGAGS--NIYRVLSEKA 803 (1045)
T ss_dssp BCSEEEEEE-----------TTEEEEEEECBSCTTSTTCBCGGGGGTCCCT-TCEEEEETTEECBTTB--CHHHHHHTTT
T ss_pred eecEEEEEe-----------CCEEEEEEecCCCcccccCCChHHHCCCCcC-CCEEEEECCEEccchh--hHHHhhcCCC
Confidence 677776542 236899999998 9999999 489 9999999999999665 5555665 46
Q ss_pred CCeEEEEEecCC
Q psy4596 240 CPEILLKIQHDP 251 (439)
Q Consensus 240 ~~~v~l~v~r~~ 251 (439)
+..+.|+|.|++
T Consensus 804 g~~v~l~v~r~~ 815 (1045)
T 1k32_A 804 GTSARIRLSGKG 815 (1045)
T ss_dssp TSEEEEEEECSS
T ss_pred CCEEEEEEECCC
Confidence 789999999976
No 379
>1at0_A 17-hedgehog; developmental signaling molecule, cholesterol transfer, signaling protein; 1.90A {Drosophila melanogaster} SCOP: b.86.1.1
Probab=46.36 E-value=44 Score=27.08 Aligned_cols=16 Identities=13% Similarity=0.052 Sum_probs=13.3
Q ss_pred hcCCCCCCCEEEEECC
Q psy4596 305 RDGRLKVGMRLLEVNG 320 (439)
Q Consensus 305 ~~G~L~~GD~Il~VNg 320 (439)
.++.|++||.|+-.+|
T Consensus 88 ~A~~l~~GD~v~~~~~ 103 (145)
T 1at0_A 88 FADRIEEKNQVLVRDV 103 (145)
T ss_dssp EGGGCCTTCEEEEECT
T ss_pred EHHHCcCCCEEEEecC
Confidence 4566999999998876
No 380
>3dor_A Protein CT_858, CPAF; mature CPAF, dimer, transferase; 2.20A {Chlamydia trachomatis} PDB: 3dpm_A* 3dpn_A 3dja_A
Probab=32.28 E-value=41 Score=34.03 Aligned_cols=29 Identities=28% Similarity=0.473 Sum_probs=22.1
Q ss_pred CeEEEEeCCCCchhhcCCCCCCCEEEEECCEEcC
Q psy4596 291 GVFITKINSGGAAKRDGRLKVGMRLLEVNGMSLL 324 (439)
Q Consensus 291 gi~I~~v~~~s~A~~~G~L~~GD~Il~VNg~~v~ 324 (439)
.+||..+..... + +..||+|++|||.++.
T Consensus 97 ~i~V~dv~~~~s----~-I~vGdEIlsING~pv~ 125 (583)
T 3dor_A 97 RFYFVDIMTFSS----E-IRVGDELLEVDGAPVQ 125 (583)
T ss_dssp CEEEEEECSSCC----S-SCTTCEEEEETTEEHH
T ss_pred cEEEEecccccc----C-CCCCCEEEEECCccHH
Confidence 478877643322 5 9999999999999884
No 381
>3dor_A Protein CT_858, CPAF; mature CPAF, dimer, transferase; 2.20A {Chlamydia trachomatis} PDB: 3dpm_A* 3dpn_A 3dja_A
Probab=27.47 E-value=71 Score=32.34 Aligned_cols=28 Identities=32% Similarity=0.606 Sum_probs=21.4
Q ss_pred EEEEEECCCChhhhcCCCCCCCEEEEECCeeCC
Q psy4596 193 IFISHIVPGGVAALSGKLRMGDRILAVNGRDVS 225 (439)
Q Consensus 193 ~~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~ 225 (439)
++|..+.... ++ +..||.|++|||+++.
T Consensus 98 i~V~dv~~~~----s~-I~vGdEIlsING~pv~ 125 (583)
T 3dor_A 98 FYFVDIMTFS----SE-IRVGDELLEVDGAPVQ 125 (583)
T ss_dssp EEEEEECSSC----CS-SCTTCEEEEETTEEHH
T ss_pred EEEEeccccc----cC-CCCCCEEEEECCccHH
Confidence 7776663322 26 9999999999999986
No 382
>2j3t_D Trafficking protein particle complex subunit 4; trapp, palmitate, transport, lipoprotein, ER-golgi transport apparatus, protein transport; HET: PLM; 2.4A {Homo sapiens} PDB: 2zmv_A 2jsn_A
Probab=25.54 E-value=61 Score=28.33 Aligned_cols=53 Identities=25% Similarity=0.334 Sum_probs=36.7
Q ss_pred cceeEEecCcccccCCCCEEEEECCeecCCCC---HHHHHHHHhh-cCCeEEEEEEe
Q psy4596 14 QAGVILAAGEVVIHPVGMRLLEVNGMSLLGAS---HQEAVNTLRY-SGHQISLTVCK 66 (439)
Q Consensus 14 ~~Gi~vsa~~~~gL~~GD~Il~VNG~~v~~~~---~~~~v~~l~~-~~~~v~L~V~R 66 (439)
+.-+.|.-|+.-|+.+|..++++||.++.+.. ..++...|-. ...++-|....
T Consensus 44 ~~~~~v~~~~~d~~~~~~~~~~~ng~~~~~~~~~d~~~v~~~iigk~N~PLyir~f~ 100 (219)
T 2j3t_D 44 DERVLVAFGQRDGIRVGHAVLAINGMDVNGRYTADGKEVLEYLGNPANYPVSIRFGR 100 (219)
T ss_dssp SSSEEEEECCCTTCCTTCEEEEETTEECBTTBCTTSSBHHHHTTCGGGCSEEEEEEC
T ss_pred cceeEEeecccCCccccceeeecCCccCCCcccccCceeeeeeecCCCCceEEEecC
Confidence 45566776777779999999999999999852 1345555544 44566665543
Done!