Query psy4598
Match_columns 369
No_of_seqs 493 out of 3447
Neff 7.7
Searched_HMMs 29240
Date Fri Aug 16 21:00:12 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4598.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/4598hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3zvl_A Bifunctional polynucleo 100.0 7.1E-60 2.4E-64 470.6 33.3 316 3-368 38-354 (416)
2 2fpr_A Histidine biosynthesis 99.9 1.4E-23 4.9E-28 184.4 11.8 140 23-183 12-159 (176)
3 3l8h_A Putative haloacid dehal 99.9 8.9E-23 3.1E-27 178.3 14.0 136 25-183 1-144 (179)
4 2gmw_A D,D-heptose 1,7-bisphos 99.8 7.5E-21 2.6E-25 171.5 12.3 146 14-183 14-175 (211)
5 2o2x_A Hypothetical protein; s 99.8 1E-19 3.6E-24 164.4 11.7 139 21-183 27-181 (218)
6 3ib6_A Uncharacterized protein 99.8 4.4E-19 1.5E-23 156.9 14.0 129 25-183 3-141 (189)
7 3kbb_A Phosphorylated carbohyd 99.8 5.4E-19 1.9E-23 157.9 7.3 95 55-181 85-181 (216)
8 2oda_A Hypothetical protein ps 99.7 1.8E-18 6E-23 154.6 8.9 122 23-183 4-131 (196)
9 2pr7_A Haloacid dehalogenase/e 99.7 1.8E-18 6.2E-23 143.2 3.0 113 25-182 2-116 (137)
10 4g9b_A Beta-PGM, beta-phosphog 99.7 5E-17 1.7E-21 149.0 7.5 96 55-184 96-193 (243)
11 4gib_A Beta-phosphoglucomutase 99.7 1.8E-16 6E-21 145.9 9.8 94 55-182 117-212 (250)
12 2ah5_A COG0546: predicted phos 99.6 1.5E-16 5E-21 142.2 5.4 93 55-182 85-179 (210)
13 3kzx_A HAD-superfamily hydrola 99.6 1.8E-15 6E-20 136.0 10.9 96 55-182 104-202 (231)
14 3m9l_A Hydrolase, haloacid deh 99.6 4.1E-16 1.4E-20 138.1 6.3 96 55-183 71-170 (205)
15 2wm8_A MDP-1, magnesium-depend 99.6 2.3E-15 7.8E-20 132.6 10.7 123 24-183 26-163 (187)
16 2pib_A Phosphorylated carbohyd 99.6 7.4E-16 2.5E-20 135.7 7.2 95 55-181 85-181 (216)
17 1zrn_A L-2-haloacid dehalogena 99.6 7.4E-16 2.5E-20 138.6 7.3 96 55-182 96-193 (232)
18 2no4_A (S)-2-haloacid dehaloge 99.6 2.3E-15 7.9E-20 136.4 10.5 96 55-182 106-203 (240)
19 2nyv_A Pgpase, PGP, phosphogly 99.6 9.4E-16 3.2E-20 138.1 7.4 97 55-183 84-182 (222)
20 3e58_A Putative beta-phosphogl 99.6 1.1E-15 3.7E-20 134.4 7.6 97 55-183 90-188 (214)
21 2p9j_A Hypothetical protein AQ 99.6 2.4E-15 8.3E-20 129.0 8.7 117 24-181 8-124 (162)
22 3um9_A Haloacid dehalogenase, 99.6 1.7E-15 5.9E-20 135.4 8.0 96 55-182 97-194 (230)
23 4ex6_A ALNB; modified rossman 99.6 9.6E-16 3.3E-20 138.1 6.2 96 55-182 105-202 (237)
24 3mc1_A Predicted phosphatase, 99.6 1.2E-15 4.2E-20 136.2 6.7 96 55-182 87-184 (226)
25 3umb_A Dehalogenase-like hydro 99.6 2E-15 6.8E-20 135.5 7.9 96 55-182 100-197 (233)
26 1ly1_A Polynucleotide kinase; 99.6 9E-15 3.1E-19 127.0 11.7 99 271-369 1-124 (181)
27 2gfh_A Haloacid dehalogenase-l 99.6 2.9E-15 1E-19 138.8 8.9 95 55-182 122-220 (260)
28 2w43_A Hypothetical 2-haloalka 99.6 5.1E-15 1.8E-19 130.6 8.4 92 55-182 75-168 (201)
29 3s6j_A Hydrolase, haloacid deh 99.6 2.5E-15 8.6E-20 134.4 6.4 97 55-183 92-190 (233)
30 3nas_A Beta-PGM, beta-phosphog 99.6 2.4E-15 8.2E-20 135.2 5.8 94 55-182 93-188 (233)
31 3cnh_A Hydrolase family protei 99.6 1.7E-15 5.8E-20 133.3 4.4 95 55-182 87-183 (200)
32 2hsz_A Novel predicted phospha 99.5 4.3E-15 1.5E-19 135.7 7.1 97 55-183 115-213 (243)
33 3sd7_A Putative phosphatase; s 99.5 3.1E-15 1.1E-19 135.4 6.0 96 55-182 111-209 (240)
34 1qq5_A Protein (L-2-haloacid d 99.5 7.5E-15 2.6E-19 134.5 8.5 94 55-182 94-189 (253)
35 3iru_A Phoshonoacetaldehyde hy 99.5 2.3E-14 7.8E-19 131.8 11.2 98 54-183 111-212 (277)
36 3k1z_A Haloacid dehalogenase-l 99.5 7.2E-15 2.5E-19 135.8 7.6 96 55-182 107-204 (263)
37 3smv_A S-(-)-azetidine-2-carbo 99.5 3.3E-15 1.1E-19 133.9 4.9 96 55-182 100-198 (240)
38 2hdo_A Phosphoglycolate phosph 99.5 4.9E-15 1.7E-19 131.2 5.9 95 55-182 84-180 (209)
39 3dv9_A Beta-phosphoglucomutase 99.5 4.1E-15 1.4E-19 134.5 5.2 95 55-182 109-207 (247)
40 3i28_A Epoxide hydrolase 2; ar 99.5 2.1E-15 7.1E-20 151.2 2.8 101 55-181 101-201 (555)
41 2i6x_A Hydrolase, haloacid deh 99.5 5.6E-15 1.9E-19 130.9 5.1 95 55-182 90-192 (211)
42 3e8m_A Acylneuraminate cytidyl 99.5 1.9E-14 6.5E-19 123.6 7.8 118 24-182 3-120 (164)
43 3m1y_A Phosphoserine phosphata 99.5 4.9E-14 1.7E-18 125.1 10.6 95 55-181 76-182 (217)
44 3qnm_A Haloacid dehalogenase-l 99.5 1.2E-14 4.1E-19 130.4 6.6 96 55-182 108-205 (240)
45 3ed5_A YFNB; APC60080, bacillu 99.5 1.3E-14 4.4E-19 130.2 6.7 96 55-182 104-202 (238)
46 3u26_A PF00702 domain protein; 99.5 1.9E-14 6.5E-19 129.0 7.8 96 55-182 101-198 (234)
47 4eek_A Beta-phosphoglucomutase 99.5 5.3E-15 1.8E-19 135.6 4.1 96 55-182 111-210 (259)
48 4dcc_A Putative haloacid dehal 99.5 6.3E-15 2.2E-19 132.9 4.4 98 55-182 113-215 (229)
49 3qxg_A Inorganic pyrophosphata 99.5 9.3E-15 3.2E-19 132.6 5.6 95 55-182 110-208 (243)
50 2fi1_A Hydrolase, haloacid deh 99.5 2.1E-14 7.1E-19 124.9 6.9 93 55-182 83-177 (190)
51 3l5k_A Protein GS1, haloacid d 99.5 7.3E-15 2.5E-19 133.9 4.0 97 55-182 113-215 (250)
52 1k1e_A Deoxy-D-mannose-octulos 99.5 6.4E-14 2.2E-18 122.7 9.0 117 24-181 7-123 (180)
53 2b0c_A Putative phosphatase; a 99.5 2.3E-14 7.9E-19 126.2 6.1 99 55-182 92-190 (206)
54 3nuq_A Protein SSM1, putative 99.5 7.1E-14 2.4E-18 130.0 9.5 93 55-179 143-244 (282)
55 3mmz_A Putative HAD family hyd 99.5 1.3E-13 4.4E-18 120.6 10.6 114 24-181 11-126 (176)
56 2zg6_A Putative uncharacterize 99.5 1.5E-14 5.2E-19 129.8 3.3 93 55-183 96-191 (220)
57 4eze_A Haloacid dehalogenase-l 99.5 4.3E-14 1.5E-18 135.4 6.5 95 55-181 180-286 (317)
58 3n07_A 3-deoxy-D-manno-octulos 99.5 1.6E-13 5.5E-18 122.4 9.6 117 24-181 24-140 (195)
59 3umg_A Haloacid dehalogenase; 99.5 2.4E-14 8.3E-19 129.5 4.3 95 55-182 117-211 (254)
60 1ltq_A Polynucleotide kinase; 99.5 2.6E-13 9E-18 128.1 11.5 98 271-368 1-123 (301)
61 3umc_A Haloacid dehalogenase; 99.5 3.4E-14 1.2E-18 129.1 4.9 95 55-182 121-215 (254)
62 3vay_A HAD-superfamily hydrola 99.5 7.3E-14 2.5E-18 124.9 7.0 92 55-183 106-199 (230)
63 2fea_A 2-hydroxy-3-keto-5-meth 99.4 1.5E-14 5.3E-19 131.6 2.4 94 55-182 78-188 (236)
64 2r8e_A 3-deoxy-D-manno-octulos 99.4 1.9E-13 6.3E-18 120.7 9.0 117 24-181 25-141 (188)
65 2rhm_A Putative kinase; P-loop 99.4 5E-13 1.7E-17 117.4 11.6 98 271-368 4-122 (193)
66 2go7_A Hydrolase, haloacid deh 99.4 1.3E-13 4.5E-18 120.1 7.7 96 55-183 86-183 (207)
67 1yv9_A Hydrolase, haloacid deh 99.4 8E-13 2.7E-17 121.8 12.9 47 118-183 181-227 (264)
68 1te2_A Putative phosphatase; s 99.4 1.1E-13 3.8E-18 122.7 6.7 96 55-182 95-192 (226)
69 3d6j_A Putative haloacid dehal 99.4 9.7E-14 3.3E-18 123.0 5.9 97 55-183 90-188 (225)
70 3n1u_A Hydrolase, HAD superfam 99.4 4.5E-13 1.5E-17 118.8 9.9 117 24-181 18-134 (191)
71 2b82_A APHA, class B acid phos 99.4 2.5E-13 8.5E-18 122.5 7.6 125 24-183 36-184 (211)
72 2wf7_A Beta-PGM, beta-phosphog 99.4 7.1E-14 2.4E-18 123.9 3.8 93 55-181 92-186 (221)
73 2p5t_B PEZT; postsegregational 99.4 1.3E-12 4.5E-17 120.8 12.5 100 269-368 29-154 (253)
74 2om6_A Probable phosphoserine 99.4 1.9E-13 6.6E-18 122.0 6.5 100 55-182 100-201 (235)
75 2hi0_A Putative phosphoglycola 99.4 4.6E-13 1.6E-17 121.7 8.7 96 55-182 111-207 (240)
76 2ho4_A Haloacid dehalogenase-l 99.4 1E-12 3.5E-17 120.1 11.0 47 118-183 177-223 (259)
77 3a4m_A L-seryl-tRNA(SEC) kinas 99.4 1.9E-12 6.6E-17 120.2 12.5 96 272-368 4-117 (260)
78 3ddh_A Putative haloacid dehal 99.4 2E-13 6.9E-18 121.4 5.5 93 55-183 106-201 (234)
79 2qlt_A (DL)-glycerol-3-phospha 99.4 1.3E-13 4.5E-18 128.2 4.1 96 55-182 115-219 (275)
80 1ltq_A Polynucleotide kinase; 99.4 5.2E-13 1.8E-17 126.0 8.3 123 25-182 159-295 (301)
81 3mn1_A Probable YRBI family ph 99.4 5.9E-13 2E-17 117.7 8.1 117 24-181 18-134 (189)
82 1gvn_B Zeta; postsegregational 99.4 2.2E-12 7.4E-17 121.8 11.9 99 269-367 30-158 (287)
83 2hcf_A Hydrolase, haloacid deh 99.4 5.8E-13 2E-17 119.2 7.6 96 55-182 94-195 (234)
84 3ij5_A 3-deoxy-D-manno-octulos 99.4 6.9E-13 2.4E-17 119.7 7.5 115 24-181 48-164 (211)
85 1swv_A Phosphonoacetaldehyde h 99.4 8.7E-13 3E-17 121.1 7.7 96 55-182 104-203 (267)
86 1vjr_A 4-nitrophenylphosphatas 99.4 3.6E-12 1.2E-16 117.7 11.7 50 21-83 13-62 (271)
87 1nnl_A L-3-phosphoserine phosp 99.3 9.8E-13 3.4E-17 117.9 7.5 93 55-182 87-195 (225)
88 3p96_A Phosphoserine phosphata 99.3 5.8E-13 2E-17 131.8 6.3 95 55-181 257-363 (415)
89 1yns_A E-1 enzyme; hydrolase f 99.3 1.8E-12 6.1E-17 120.3 8.8 95 55-183 131-230 (261)
90 1rku_A Homoserine kinase; phos 99.3 1.2E-12 4E-17 115.8 7.2 94 55-181 70-169 (206)
91 3fvv_A Uncharacterized protein 99.3 6E-13 2.1E-17 119.7 5.3 97 55-183 93-205 (232)
92 2g80_A Protein UTR4; YEL038W, 99.3 1.4E-12 4.8E-17 120.9 7.8 91 55-182 126-229 (253)
93 3epr_A Hydrolase, haloacid deh 99.3 4E-12 1.4E-16 117.5 10.9 47 117-183 179-226 (264)
94 2oyc_A PLP phosphatase, pyrido 99.3 8.5E-12 2.9E-16 118.0 12.4 48 23-83 19-66 (306)
95 3t61_A Gluconokinase; PSI-biol 99.3 4.6E-12 1.6E-16 112.6 9.8 95 271-368 17-128 (202)
96 3kd3_A Phosphoserine phosphohy 99.3 2.5E-12 8.5E-17 113.3 7.4 95 55-181 83-187 (219)
97 1qhx_A CPT, protein (chloramph 99.3 1E-11 3.5E-16 107.7 11.1 96 271-368 2-130 (178)
98 3nvb_A Uncharacterized protein 99.3 5.4E-12 1.8E-16 123.2 10.4 122 22-181 219-354 (387)
99 2vli_A Antibiotic resistance p 99.3 7.5E-12 2.6E-16 108.9 10.1 98 271-368 4-122 (183)
100 2pke_A Haloacid delahogenase-l 99.3 5.4E-12 1.8E-16 114.9 9.0 92 55-183 113-206 (251)
101 2yvu_A Probable adenylyl-sulfa 99.3 3E-11 1E-15 105.9 12.1 98 271-368 12-130 (186)
102 3ewi_A N-acylneuraminate cytid 99.3 9.8E-12 3.4E-16 108.2 8.6 115 23-181 7-123 (168)
103 2axn_A 6-phosphofructo-2-kinas 99.3 1.7E-11 5.8E-16 124.9 11.4 98 270-367 33-164 (520)
104 3qgm_A P-nitrophenyl phosphata 99.3 4E-11 1.4E-15 110.6 12.5 48 116-183 183-231 (268)
105 1qf9_A UMP/CMP kinase, protein 99.2 4.7E-11 1.6E-15 104.4 12.3 102 267-368 1-128 (194)
106 1knq_A Gluconate kinase; ALFA/ 99.2 5.7E-11 2E-15 102.9 12.4 93 272-368 8-121 (175)
107 1m7g_A Adenylylsulfate kinase; 99.2 3.3E-11 1.1E-15 108.0 11.1 100 269-368 22-149 (211)
108 3pdw_A Uncharacterized hydrola 99.2 2.1E-11 7.2E-16 112.5 10.0 47 117-183 180-227 (266)
109 2i33_A Acid phosphatase; HAD s 99.2 6.9E-12 2.4E-16 116.6 6.7 124 22-181 56-212 (258)
110 2hx1_A Predicted sugar phospha 99.2 4.6E-11 1.6E-15 111.5 12.3 47 23-82 12-58 (284)
111 1qyi_A ZR25, hypothetical prot 99.2 4.5E-12 1.5E-16 124.3 5.0 100 55-182 216-340 (384)
112 2hoq_A Putative HAD-hydrolase 99.2 3E-11 1E-15 109.3 10.1 97 55-182 95-193 (241)
113 2fdr_A Conserved hypothetical 99.2 1.2E-12 4E-17 116.8 0.6 93 55-182 88-185 (229)
114 1l7m_A Phosphoserine phosphata 99.2 9.6E-12 3.3E-16 109.2 6.2 94 55-180 77-182 (211)
115 2p11_A Hypothetical protein; p 99.2 1.5E-12 5.1E-17 117.7 0.0 89 55-183 97-190 (231)
116 2i7d_A 5'(3')-deoxyribonucleot 99.2 2.5E-13 8.4E-18 120.0 -5.1 81 55-182 74-160 (193)
117 1tev_A UMP-CMP kinase; ploop, 99.2 8.8E-11 3E-15 102.8 11.4 97 272-368 3-131 (196)
118 1zjj_A Hypothetical protein PH 99.2 1.1E-10 3.6E-15 107.9 12.5 46 117-183 184-229 (263)
119 4eun_A Thermoresistant glucoki 99.2 5.5E-11 1.9E-15 105.7 9.5 96 269-368 26-142 (200)
120 2x4d_A HLHPP, phospholysine ph 99.2 1.9E-10 6.3E-15 105.0 12.7 46 118-182 188-233 (271)
121 2cdn_A Adenylate kinase; phosp 99.2 1.5E-10 5.2E-15 102.6 11.3 100 269-368 17-144 (201)
122 3kc2_A Uncharacterized protein 99.1 4E-10 1.4E-14 109.2 13.5 47 24-83 12-58 (352)
123 3n28_A Phosphoserine phosphata 99.1 1.5E-11 5.1E-16 118.0 3.2 95 55-181 179-285 (335)
124 2c4n_A Protein NAGD; nucleotid 99.1 1.1E-10 3.6E-15 104.9 8.6 46 117-182 173-219 (250)
125 3uie_A Adenylyl-sulfate kinase 99.1 2.2E-10 7.4E-15 101.8 10.2 100 267-368 20-140 (200)
126 3lw7_A Adenylate kinase relate 99.1 2.8E-10 9.4E-15 97.4 10.3 91 273-368 2-119 (179)
127 2c95_A Adenylate kinase 1; tra 99.1 2.9E-10 1E-14 99.8 10.2 94 272-368 9-130 (196)
128 1aky_A Adenylate kinase; ATP:A 99.1 3.7E-10 1.3E-14 101.6 11.1 97 272-368 4-129 (220)
129 3cm0_A Adenylate kinase; ATP-b 99.1 3.6E-10 1.2E-14 98.6 10.7 95 272-368 4-123 (186)
130 3fb4_A Adenylate kinase; psych 99.1 3.7E-10 1.3E-14 101.0 11.0 95 274-368 2-124 (216)
131 3dl0_A Adenylate kinase; phosp 99.1 3.7E-10 1.3E-14 101.2 11.0 95 274-368 2-124 (216)
132 2bwj_A Adenylate kinase 5; pho 99.1 3.1E-10 1E-14 99.9 10.1 95 271-368 11-133 (199)
133 2hhl_A CTD small phosphatase-l 99.1 3.2E-11 1.1E-15 107.5 3.4 119 23-180 26-160 (195)
134 3sr0_A Adenylate kinase; phosp 99.1 5.7E-10 1.9E-14 100.2 10.6 95 274-368 2-121 (206)
135 1x6v_B Bifunctional 3'-phospho 99.1 7.7E-10 2.6E-14 114.4 12.7 98 271-368 51-169 (630)
136 3be4_A Adenylate kinase; malar 99.1 8.4E-10 2.9E-14 99.3 11.4 96 273-368 6-129 (217)
137 3tlx_A Adenylate kinase 2; str 99.1 8.9E-10 3E-14 101.2 11.6 97 271-367 28-152 (243)
138 2ght_A Carboxy-terminal domain 99.0 8E-11 2.7E-15 103.6 4.1 122 23-180 13-147 (181)
139 2xb4_A Adenylate kinase; ATP-b 99.0 1.1E-09 3.8E-14 99.0 11.0 95 274-368 2-123 (223)
140 3kb2_A SPBC2 prophage-derived 99.0 1.9E-09 6.4E-14 92.4 11.6 92 273-368 2-112 (173)
141 1ukz_A Uridylate kinase; trans 99.0 1.4E-09 4.8E-14 96.3 10.9 97 269-368 12-138 (203)
142 3trf_A Shikimate kinase, SK; a 99.0 5.8E-10 2E-14 97.2 8.2 90 272-368 5-115 (185)
143 3vaa_A Shikimate kinase, SK; s 99.0 5.4E-10 1.9E-14 99.1 7.8 93 272-368 25-135 (199)
144 1m8p_A Sulfate adenylyltransfe 99.0 2.5E-09 8.5E-14 110.0 13.1 98 270-368 394-513 (573)
145 2ze6_A Isopentenyl transferase 99.0 1.7E-09 5.7E-14 100.0 9.9 91 273-368 2-135 (253)
146 3umf_A Adenylate kinase; rossm 99.0 2.3E-09 8E-14 96.9 10.3 96 270-368 27-150 (217)
147 2pez_A Bifunctional 3'-phospho 98.9 7.8E-09 2.7E-13 89.8 12.7 97 272-368 5-122 (179)
148 1e6c_A Shikimate kinase; phosp 98.9 2.3E-09 7.8E-14 92.2 9.1 90 271-368 1-111 (173)
149 4gp7_A Metallophosphoesterase; 98.9 5.8E-09 2E-13 90.4 11.6 95 271-367 8-117 (171)
150 1bif_A 6-phosphofructo-2-kinas 98.9 3.1E-09 1.1E-13 106.8 11.2 98 270-367 37-167 (469)
151 4ap9_A Phosphoserine phosphata 98.9 2.1E-10 7.1E-15 99.8 1.9 91 55-180 80-173 (201)
152 1ak2_A Adenylate kinase isoenz 98.9 6.7E-09 2.3E-13 94.4 11.7 96 272-367 16-139 (233)
153 2bdt_A BH3686; alpha-beta prot 98.9 1.2E-08 4E-13 89.3 12.5 96 272-368 2-119 (189)
154 3skx_A Copper-exporting P-type 98.9 3.2E-10 1.1E-14 104.4 2.5 84 54-181 144-229 (280)
155 1zd8_A GTP:AMP phosphotransfer 98.9 6.7E-09 2.3E-13 93.8 10.4 93 272-368 7-125 (227)
156 2iyv_A Shikimate kinase, SK; t 98.9 2.7E-09 9.4E-14 92.9 6.8 90 271-368 1-111 (184)
157 2gks_A Bifunctional SAT/APS ki 98.9 3.4E-09 1.2E-13 108.4 8.6 96 271-368 371-487 (546)
158 2pt5_A Shikimate kinase, SK; a 98.8 4.3E-09 1.5E-13 90.1 7.2 88 274-368 2-110 (168)
159 3gyg_A NTD biosynthesis operon 98.8 1.5E-09 5.1E-14 101.4 4.7 107 55-181 123-251 (289)
160 1wr8_A Phosphoglycolate phosph 98.8 2E-08 6.8E-13 90.9 11.1 123 25-180 3-192 (231)
161 3fzq_A Putative hydrolase; YP_ 98.8 1.6E-08 5.5E-13 92.9 10.6 44 118-181 197-240 (274)
162 1q92_A 5(3)-deoxyribonucleotid 98.8 3.7E-10 1.3E-14 99.8 -0.8 82 55-183 76-163 (197)
163 2pbr_A DTMP kinase, thymidylat 98.8 2.9E-08 1E-12 86.5 11.3 95 274-368 2-140 (195)
164 1zak_A Adenylate kinase; ATP:A 98.8 1.4E-08 4.9E-13 91.2 8.8 94 271-368 4-126 (222)
165 1via_A Shikimate kinase; struc 98.8 6.3E-09 2.1E-13 90.0 6.1 88 273-368 5-110 (175)
166 2obb_A Hypothetical protein; s 98.8 8E-09 2.7E-13 87.1 6.0 69 25-110 3-71 (142)
167 3iij_A Coilin-interacting nucl 98.7 1.2E-08 4.3E-13 88.5 6.2 86 272-368 11-114 (180)
168 1e4v_A Adenylate kinase; trans 98.7 5.3E-08 1.8E-12 87.1 9.6 90 274-367 2-119 (214)
169 1l6r_A Hypothetical protein TA 98.7 2.6E-08 8.9E-13 90.2 7.6 43 25-79 5-47 (227)
170 4dw8_A Haloacid dehalogenase-l 98.7 7.8E-08 2.7E-12 88.9 10.9 43 119-181 195-237 (279)
171 3mpo_A Predicted hydrolase of 98.7 3.2E-08 1.1E-12 91.5 8.3 44 25-80 5-48 (279)
172 2z0h_A DTMP kinase, thymidylat 98.7 5.7E-08 1.9E-12 85.0 9.3 94 274-368 2-139 (197)
173 1kag_A SKI, shikimate kinase I 98.7 4.7E-08 1.6E-12 83.9 8.1 93 271-367 3-113 (173)
174 3ocu_A Lipoprotein E; hydrolas 98.7 9.4E-09 3.2E-13 95.3 3.7 108 23-151 56-183 (262)
175 1nks_A Adenylate kinase; therm 98.7 2.9E-08 9.8E-13 86.4 6.5 90 273-367 2-132 (194)
176 1y63_A LMAJ004144AAA protein; 98.6 4.5E-08 1.5E-12 85.6 7.6 91 267-367 5-117 (184)
177 3r4c_A Hydrolase, haloacid deh 98.6 1.5E-07 5.1E-12 86.4 11.4 46 24-80 11-56 (268)
178 1kht_A Adenylate kinase; phosp 98.6 1.3E-08 4.4E-13 88.6 3.8 93 273-366 4-130 (192)
179 1zuh_A Shikimate kinase; alpha 98.6 4.5E-08 1.5E-12 83.9 6.8 36 271-306 6-41 (168)
180 2plr_A DTMP kinase, probable t 98.6 1E-07 3.6E-12 84.2 9.2 97 272-368 4-139 (213)
181 2qor_A Guanylate kinase; phosp 98.6 3.8E-08 1.3E-12 87.4 6.2 90 272-368 12-144 (204)
182 3cr8_A Sulfate adenylyltranfer 98.6 8.3E-08 2.8E-12 98.2 9.2 97 271-368 368-486 (552)
183 3dnp_A Stress response protein 98.6 1.5E-07 5.1E-12 87.4 9.5 44 25-80 6-49 (290)
184 3l7y_A Putative uncharacterize 98.6 1E-07 3.6E-12 89.6 8.5 45 24-80 36-81 (304)
185 2wwf_A Thymidilate kinase, put 98.6 1.4E-08 4.9E-13 90.1 2.1 97 272-368 10-148 (212)
186 1nn5_A Similar to deoxythymidy 98.6 5.1E-08 1.7E-12 86.6 5.6 97 272-368 9-147 (215)
187 3a1c_A Probable copper-exporti 98.6 2.1E-07 7.3E-12 87.0 9.7 105 25-180 143-247 (287)
188 3pct_A Class C acid phosphatas 98.5 3.4E-08 1.2E-12 91.4 3.8 106 25-151 58-183 (260)
189 3pgv_A Haloacid dehalogenase-l 98.5 3.1E-07 1.1E-11 85.5 10.2 46 23-80 19-64 (285)
190 4eaq_A DTMP kinase, thymidylat 98.5 2.5E-07 8.6E-12 84.1 9.0 98 271-368 25-166 (229)
191 3dao_A Putative phosphatse; st 98.5 9.3E-07 3.2E-11 82.2 12.5 48 22-80 18-65 (283)
192 3gmt_A Adenylate kinase; ssgci 98.5 3.4E-07 1.2E-11 83.3 9.0 91 274-368 10-128 (230)
193 2rbk_A Putative uncharacterize 98.5 8.5E-07 2.9E-11 81.3 11.8 44 118-181 184-227 (261)
194 2jaq_A Deoxyguanosine kinase; 98.5 8.2E-07 2.8E-11 77.8 11.0 29 274-302 2-30 (205)
195 1uj2_A Uridine-cytidine kinase 98.5 6.2E-07 2.1E-11 82.3 10.2 41 267-307 17-67 (252)
196 3zx4_A MPGP, mannosyl-3-phosph 98.5 3.8E-07 1.3E-11 83.6 8.6 42 120-181 175-218 (259)
197 3a8t_A Adenylate isopentenyltr 98.4 2.4E-06 8.2E-11 81.9 14.2 95 271-367 39-190 (339)
198 2grj_A Dephospho-COA kinase; T 98.4 2.4E-07 8.3E-12 82.0 6.4 35 272-306 12-46 (192)
199 2f6r_A COA synthase, bifunctio 98.4 4.2E-07 1.4E-11 85.1 7.2 38 268-306 71-108 (281)
200 1jjv_A Dephospho-COA kinase; P 98.4 5.5E-07 1.9E-11 79.7 7.3 35 271-306 1-35 (206)
201 2v54_A DTMP kinase, thymidylat 98.4 8.9E-07 3E-11 77.8 8.3 95 272-366 4-137 (204)
202 3bwv_A Putative 5'(3')-deoxyri 98.4 3.8E-07 1.3E-11 78.8 5.7 24 55-79 70-93 (180)
203 1zp6_A Hypothetical protein AT 98.4 2.2E-06 7.5E-11 74.5 10.5 92 272-368 9-123 (191)
204 3nwj_A ATSK2; P loop, shikimat 98.3 4.8E-07 1.6E-11 83.4 6.4 88 272-367 48-158 (250)
205 2pq0_A Hypothetical conserved 98.3 3.7E-06 1.3E-10 76.7 11.8 44 25-80 3-46 (258)
206 4edh_A DTMP kinase, thymidylat 98.3 5E-06 1.7E-10 74.7 11.7 97 272-368 6-149 (213)
207 2qt1_A Nicotinamide riboside k 98.3 2.8E-06 9.7E-11 75.1 9.4 89 271-367 20-146 (207)
208 3crm_A TRNA delta(2)-isopenten 98.3 1.5E-06 5E-11 83.0 7.6 37 270-306 3-39 (323)
209 4hlc_A DTMP kinase, thymidylat 98.3 6.9E-06 2.4E-10 73.3 11.6 97 271-367 1-141 (205)
210 1rlm_A Phosphatase; HAD family 98.2 4.7E-06 1.6E-10 76.9 10.8 44 118-181 188-231 (271)
211 3lv8_A DTMP kinase, thymidylat 98.2 1.8E-06 6.3E-11 78.8 7.7 97 272-368 27-172 (236)
212 2if2_A Dephospho-COA kinase; a 98.2 1E-06 3.4E-11 77.8 5.1 33 273-306 2-34 (204)
213 2bbw_A Adenylate kinase 4, AK4 98.2 5.1E-06 1.7E-10 75.7 9.8 92 272-367 27-144 (246)
214 2yj3_A Copper-transporting ATP 97.5 1.8E-07 6.2E-12 86.6 0.0 83 55-180 137-221 (263)
215 3tr0_A Guanylate kinase, GMP k 98.2 1.4E-05 4.9E-10 70.0 12.1 89 273-367 8-135 (205)
216 3ake_A Cytidylate kinase; CMP 98.2 3.7E-06 1.3E-10 74.0 8.1 35 273-307 3-37 (208)
217 3foz_A TRNA delta(2)-isopenten 98.2 7.6E-06 2.6E-10 77.4 10.3 38 269-306 7-44 (316)
218 3v9p_A DTMP kinase, thymidylat 98.2 3.5E-06 1.2E-10 76.5 7.6 97 272-368 25-169 (227)
219 3tau_A Guanylate kinase, GMP k 98.1 9.3E-07 3.2E-11 78.8 3.5 26 272-297 8-33 (208)
220 4i1u_A Dephospho-COA kinase; s 98.1 1.5E-05 5.1E-10 71.4 10.0 37 269-306 6-42 (210)
221 3ld9_A DTMP kinase, thymidylat 98.1 1.2E-05 4.2E-10 72.7 9.4 101 266-367 15-162 (223)
222 4tmk_A Protein (thymidylate ki 98.0 1E-05 3.5E-10 72.6 8.1 95 273-367 4-149 (213)
223 3r20_A Cytidylate kinase; stru 98.0 1E-05 3.5E-10 73.7 7.8 36 271-306 8-43 (233)
224 3fdi_A Uncharacterized protein 98.0 6E-06 2.1E-10 73.4 6.0 87 273-368 7-134 (201)
225 2j41_A Guanylate kinase; GMP, 98.0 3.2E-05 1.1E-09 67.7 10.7 26 271-296 5-30 (207)
226 1kgd_A CASK, peripheral plasma 98.0 5.7E-06 2E-10 71.8 5.3 25 272-296 5-29 (180)
227 1xpj_A Hypothetical protein; s 98.0 7.8E-06 2.7E-10 67.1 5.5 50 26-81 2-51 (126)
228 3hjn_A DTMP kinase, thymidylat 97.9 6.6E-05 2.3E-09 66.4 11.6 95 274-368 2-139 (197)
229 1p5z_B DCK, deoxycytidine kina 97.9 9.7E-06 3.3E-10 74.7 6.1 31 272-302 24-55 (263)
230 1ex7_A Guanylate kinase; subst 97.9 1.9E-05 6.5E-10 69.4 7.6 88 274-367 3-131 (186)
231 4e22_A Cytidylate kinase; P-lo 97.9 4.4E-05 1.5E-09 70.0 10.4 35 273-307 28-62 (252)
232 3exa_A TRNA delta(2)-isopenten 97.9 2.4E-05 8.1E-10 74.2 8.4 35 272-306 3-37 (322)
233 1gtv_A TMK, thymidylate kinase 97.9 1.4E-06 4.8E-11 77.1 -0.3 23 274-296 2-24 (214)
234 3hdt_A Putative kinase; struct 97.9 2.4E-05 8.4E-10 70.7 7.9 35 272-306 14-48 (223)
235 1q3t_A Cytidylate kinase; nucl 97.9 5.2E-05 1.8E-09 68.5 10.0 38 270-307 14-51 (236)
236 1uf9_A TT1252 protein; P-loop, 97.8 6.9E-06 2.4E-10 71.9 3.1 35 271-306 7-41 (203)
237 3a00_A Guanylate kinase, GMP k 97.8 8E-06 2.8E-10 71.2 2.8 88 273-367 2-131 (186)
238 1rz3_A Hypothetical protein rb 97.8 1.2E-05 4.1E-10 71.0 3.9 38 269-306 19-61 (201)
239 3d3q_A TRNA delta(2)-isopenten 97.8 1.6E-05 5.5E-10 76.3 4.8 36 271-306 6-41 (340)
240 1cke_A CK, MSSA, protein (cyti 97.8 9.4E-06 3.2E-10 72.5 2.7 36 272-307 5-40 (227)
241 3qle_A TIM50P; chaperone, mito 97.7 7.4E-06 2.5E-10 73.1 1.6 104 23-151 32-139 (204)
242 1vht_A Dephospho-COA kinase; s 97.7 1.8E-05 6.1E-10 70.5 3.6 34 272-306 4-37 (218)
243 2jc9_A Cytosolic purine 5'-nuc 97.7 8.5E-05 2.9E-09 75.0 8.1 93 55-183 247-390 (555)
244 3eph_A TRNA isopentenyltransfe 97.6 0.00011 3.8E-09 71.9 7.2 35 272-306 2-36 (409)
245 1s96_A Guanylate kinase, GMP k 97.5 0.00082 2.8E-08 60.3 11.5 89 273-367 17-146 (219)
246 3ney_A 55 kDa erythrocyte memb 97.5 0.00019 6.6E-09 63.5 7.2 27 271-297 18-44 (197)
247 2h92_A Cytidylate kinase; ross 97.5 3.5E-05 1.2E-09 68.4 2.4 35 272-306 3-37 (219)
248 2ocp_A DGK, deoxyguanosine kin 97.5 0.00021 7.1E-09 64.7 7.4 29 272-300 2-31 (241)
249 3asz_A Uridine kinase; cytidin 97.5 5.8E-05 2E-09 66.6 3.5 37 270-306 4-42 (211)
250 3tmk_A Thymidylate kinase; pho 97.5 4.4E-05 1.5E-09 68.7 2.6 96 272-368 5-144 (216)
251 2zos_A MPGP, mannosyl-3-phosph 97.4 0.00016 5.4E-09 65.8 6.2 41 25-79 2-42 (249)
252 1g8f_A Sulfate adenylyltransfe 97.4 0.00011 3.8E-09 74.3 5.2 59 272-333 395-460 (511)
253 3lnc_A Guanylate kinase, GMP k 97.4 0.00021 7.2E-09 64.1 6.5 25 272-296 27-52 (231)
254 3ef0_A RNA polymerase II subun 97.4 0.00015 5E-09 70.5 5.7 108 22-151 15-154 (372)
255 1xvi_A MPGP, YEDP, putative ma 97.4 0.00025 8.5E-09 65.5 6.6 57 25-105 9-65 (275)
256 3syl_A Protein CBBX; photosynt 97.3 0.00094 3.2E-08 62.2 10.3 87 272-360 67-178 (309)
257 1nrw_A Hypothetical protein, h 97.3 0.00041 1.4E-08 64.3 7.7 42 25-78 4-45 (288)
258 2chg_A Replication factor C sm 97.3 0.0013 4.6E-08 57.0 10.3 84 274-357 40-138 (226)
259 3ec2_A DNA replication protein 97.3 0.0012 4.3E-08 56.5 9.8 74 272-345 38-126 (180)
260 1a7j_A Phosphoribulokinase; tr 97.3 5.3E-05 1.8E-09 71.1 1.1 36 272-307 5-45 (290)
261 2vp4_A Deoxynucleoside kinase; 97.2 0.00071 2.4E-08 60.8 8.1 32 271-302 19-50 (230)
262 3kl4_A SRP54, signal recogniti 97.2 0.0012 4.2E-08 65.2 10.0 37 271-307 96-137 (433)
263 3dm5_A SRP54, signal recogniti 97.2 0.0016 5.6E-08 64.5 10.7 37 271-307 99-140 (443)
264 3f9r_A Phosphomannomutase; try 97.2 0.00028 9.7E-09 64.3 4.8 43 25-79 4-46 (246)
265 1njg_A DNA polymerase III subu 97.1 0.0013 4.6E-08 57.7 8.3 25 272-296 45-69 (250)
266 1nf2_A Phosphatase; structural 97.1 0.00076 2.6E-08 61.8 6.9 42 25-79 2-43 (268)
267 3ch4_B Pmkase, phosphomevalona 97.1 0.0025 8.6E-08 56.4 9.9 93 271-367 10-143 (202)
268 3t15_A Ribulose bisphosphate c 97.1 0.0003 1E-08 65.9 4.1 37 269-305 33-71 (293)
269 3co5_A Putative two-component 97.1 0.0015 5E-08 54.2 7.8 71 274-347 29-101 (143)
270 2qmh_A HPR kinase/phosphorylas 97.1 0.00044 1.5E-08 61.3 4.6 34 272-306 34-67 (205)
271 2cvh_A DNA repair and recombin 97.1 0.0026 8.7E-08 55.9 9.7 34 272-305 20-55 (220)
272 4b4t_M 26S protease regulatory 97.1 0.00056 1.9E-08 67.7 5.8 35 268-302 211-245 (434)
273 1rkq_A Hypothetical protein YI 97.0 0.00043 1.5E-08 64.0 4.7 43 25-79 5-47 (282)
274 4b4t_K 26S protease regulatory 97.0 0.00077 2.6E-08 66.6 6.5 36 268-303 202-237 (428)
275 3u61_B DNA polymerase accessor 97.0 0.0017 5.7E-08 61.1 8.5 85 271-356 47-141 (324)
276 4b4t_L 26S protease subunit RP 97.0 0.0008 2.7E-08 66.7 6.4 35 268-302 211-245 (437)
277 4b4t_J 26S protease regulatory 97.0 0.00072 2.5E-08 66.2 5.9 34 269-302 179-212 (405)
278 2b30_A Pvivax hypothetical pro 97.0 0.00053 1.8E-08 64.3 4.7 43 25-79 27-70 (301)
279 3n70_A Transport activator; si 97.0 0.0024 8.2E-08 52.9 8.3 88 274-364 26-120 (145)
280 1sxj_E Activator 1 40 kDa subu 97.0 0.0025 8.4E-08 60.5 9.4 23 272-295 37-59 (354)
281 4b4t_I 26S protease regulatory 97.0 0.00092 3.1E-08 65.9 6.4 36 267-302 211-246 (437)
282 3c8u_A Fructokinase; YP_612366 97.0 0.0004 1.4E-08 61.4 3.4 37 270-306 20-61 (208)
283 2p65_A Hypothetical protein PF 96.9 0.00089 3E-08 56.8 5.4 26 271-296 42-67 (187)
284 2kjq_A DNAA-related protein; s 96.9 0.0013 4.4E-08 55.3 6.1 53 273-333 37-94 (149)
285 3h4m_A Proteasome-activating n 96.9 0.0015 5.1E-08 60.1 7.0 31 271-301 50-80 (285)
286 4b4t_H 26S protease regulatory 96.9 0.00099 3.4E-08 66.2 5.9 34 269-302 240-273 (467)
287 1vma_A Cell division protein F 96.9 0.0047 1.6E-07 58.2 10.3 38 270-307 102-144 (306)
288 1iqp_A RFCS; clamp loader, ext 96.9 0.0026 9E-08 59.2 8.5 85 274-358 48-147 (327)
289 4a74_A DNA repair and recombin 96.9 0.0039 1.3E-07 55.0 9.2 23 272-294 25-47 (231)
290 3tqc_A Pantothenate kinase; bi 96.9 0.00068 2.3E-08 64.5 4.3 38 269-306 89-133 (321)
291 2vhj_A Ntpase P4, P4; non- hyd 96.9 0.0029 1E-07 60.1 8.6 60 273-332 124-192 (331)
292 1odf_A YGR205W, hypothetical 3 96.8 0.00066 2.3E-08 63.6 3.7 39 268-306 27-73 (290)
293 2px0_A Flagellar biosynthesis 96.8 0.007 2.4E-07 56.7 10.7 36 272-307 105-146 (296)
294 2jeo_A Uridine-cytidine kinase 96.8 0.00077 2.6E-08 61.1 3.8 36 271-306 24-69 (245)
295 1hqc_A RUVB; extended AAA-ATPa 96.8 0.0014 4.7E-08 61.4 5.5 76 273-348 39-117 (324)
296 1sq5_A Pantothenate kinase; P- 96.7 0.001 3.4E-08 62.7 4.4 37 270-306 78-121 (308)
297 2j37_W Signal recognition part 96.7 0.008 2.7E-07 60.6 11.2 37 271-307 100-141 (504)
298 1u02_A Trehalose-6-phosphate p 96.7 0.001 3.6E-08 60.0 4.3 46 26-79 2-47 (239)
299 1sxj_A Activator 1 95 kDa subu 96.7 0.0014 4.7E-08 66.3 5.6 31 272-302 77-107 (516)
300 2amy_A PMM 2, phosphomannomuta 96.7 0.0012 4E-08 59.7 4.3 42 24-78 5-46 (246)
301 1svi_A GTP-binding protein YSX 96.7 0.0087 3E-07 51.1 9.7 25 271-295 22-46 (195)
302 1ye8_A Protein THEP1, hypothet 96.7 0.0032 1.1E-07 54.4 6.8 23 274-296 2-24 (178)
303 3cf0_A Transitional endoplasmi 96.7 0.0011 3.8E-08 62.0 4.1 34 271-304 48-81 (301)
304 2yhs_A FTSY, cell division pro 96.7 0.0091 3.1E-07 59.9 10.9 38 270-307 291-333 (503)
305 3pvs_A Replication-associated 96.6 0.0029 9.9E-08 62.9 7.2 75 273-347 51-132 (447)
306 3zvl_A Bifunctional polynucleo 96.6 0.011 3.8E-07 58.0 11.3 47 220-266 255-301 (416)
307 3pfi_A Holliday junction ATP-d 96.6 0.0026 8.8E-08 60.1 6.5 76 273-349 56-134 (338)
308 2qz4_A Paraplegin; AAA+, SPG7, 96.6 0.001 3.5E-08 60.2 3.5 36 271-306 38-75 (262)
309 1sxj_B Activator 1 37 kDa subu 96.6 0.0044 1.5E-07 57.6 7.9 84 275-358 45-144 (323)
310 1lv7_A FTSH; alpha/beta domain 96.6 0.0011 3.8E-08 60.2 3.5 35 272-306 45-81 (257)
311 1sxj_D Activator 1 41 kDa subu 96.6 0.005 1.7E-07 58.1 8.1 83 275-357 61-169 (353)
312 3e70_C DPA, signal recognition 96.6 0.0074 2.5E-07 57.4 9.3 37 270-306 127-168 (328)
313 2v1u_A Cell division control p 96.6 0.0063 2.2E-07 57.8 8.8 25 272-296 44-68 (387)
314 3b9p_A CG5977-PA, isoform A; A 96.6 0.0015 5E-08 60.6 4.2 34 272-305 54-89 (297)
315 1l8q_A Chromosomal replication 96.5 0.0046 1.6E-07 58.1 7.6 59 273-331 38-107 (324)
316 1jbk_A CLPB protein; beta barr 96.5 0.0017 5.8E-08 55.0 4.1 26 271-296 42-67 (195)
317 2fue_A PMM 1, PMMH-22, phospho 96.5 0.0016 5.6E-08 59.4 4.1 42 24-78 12-53 (262)
318 3uk6_A RUVB-like 2; hexameric 96.5 0.0053 1.8E-07 58.5 7.7 25 273-297 71-95 (368)
319 1d2n_A N-ethylmaleimide-sensit 96.5 0.0016 5.6E-08 59.6 3.9 32 269-300 61-92 (272)
320 2x8a_A Nuclear valosin-contain 96.5 0.0017 5.7E-08 60.2 3.9 32 275-306 47-80 (274)
321 1jr3_A DNA polymerase III subu 96.5 0.0049 1.7E-07 58.7 7.2 88 272-359 38-157 (373)
322 2qby_B CDC6 homolog 3, cell di 96.4 0.0029 9.8E-08 60.5 5.5 26 271-296 44-69 (384)
323 1p6x_A Thymidine kinase; P-loo 96.4 0.0059 2E-07 58.2 7.6 26 272-297 7-32 (334)
324 1sxj_C Activator 1 40 kDa subu 96.4 0.0072 2.5E-07 57.3 8.2 82 275-356 49-145 (340)
325 1j8m_F SRP54, signal recogniti 96.4 0.015 5E-07 54.5 10.1 36 272-307 98-138 (297)
326 3lda_A DNA repair protein RAD5 96.4 0.013 4.5E-07 57.2 10.0 33 273-305 179-222 (400)
327 3eie_A Vacuolar protein sortin 96.4 0.0018 6.1E-08 61.2 3.6 31 272-302 51-81 (322)
328 3cf2_A TER ATPase, transitiona 96.4 0.0058 2E-07 64.9 7.8 35 270-304 236-270 (806)
329 3hws_A ATP-dependent CLP prote 96.4 0.0015 5.2E-08 62.6 3.1 32 272-303 51-82 (363)
330 3tqf_A HPR(Ser) kinase; transf 96.3 0.0026 8.9E-08 55.0 4.0 33 273-306 17-49 (181)
331 1g41_A Heat shock protein HSLU 96.3 0.0016 5.6E-08 64.5 3.1 33 272-304 50-82 (444)
332 2ffh_A Protein (FFH); SRP54, s 96.3 0.022 7.4E-07 56.2 11.2 36 272-307 98-138 (425)
333 1in4_A RUVB, holliday junction 96.3 0.0051 1.8E-07 58.4 6.5 69 273-342 52-123 (334)
334 2dyk_A GTP-binding protein; GT 96.3 0.022 7.5E-07 46.7 9.6 88 274-361 3-120 (161)
335 3rlf_A Maltose/maltodextrin im 96.3 0.018 6E-07 56.0 10.1 51 313-365 142-198 (381)
336 1xwi_A SKD1 protein; VPS4B, AA 96.3 0.0024 8.2E-08 60.5 3.9 34 272-305 45-81 (322)
337 1zu4_A FTSY; GTPase, signal re 96.3 0.018 6.1E-07 54.5 9.9 37 271-307 104-145 (320)
338 2zr9_A Protein RECA, recombina 96.2 0.014 4.7E-07 56.0 9.0 33 273-305 62-99 (349)
339 3pqc_A Probable GTP-binding pr 96.2 0.023 7.8E-07 48.2 9.7 89 273-361 24-145 (195)
340 2dr3_A UPF0273 protein PH0284; 96.2 0.02 6.9E-07 50.9 9.6 33 273-305 24-61 (247)
341 3b9q_A Chloroplast SRP recepto 96.2 0.024 8.4E-07 53.1 10.4 37 271-307 99-140 (302)
342 1ixz_A ATP-dependent metallopr 96.2 0.0022 7.6E-08 58.1 3.1 30 274-303 51-82 (254)
343 2xxa_A Signal recognition part 96.2 0.021 7.4E-07 56.3 10.3 37 271-307 99-141 (433)
344 3te6_A Regulatory protein SIR3 96.2 0.011 3.7E-07 56.1 7.8 28 269-296 42-69 (318)
345 1lvg_A Guanylate kinase, GMP k 96.2 0.0021 7E-08 56.4 2.6 23 273-295 5-27 (198)
346 2v3c_C SRP54, signal recogniti 96.2 0.0049 1.7E-07 60.9 5.6 35 272-306 99-138 (432)
347 2chq_A Replication factor C sm 96.2 0.0025 8.5E-08 59.2 3.3 84 275-358 41-139 (319)
348 1nrj_B SR-beta, signal recogni 96.2 0.037 1.3E-06 48.2 10.8 24 272-295 12-35 (218)
349 1n0w_A DNA repair protein RAD5 96.1 0.013 4.5E-07 52.0 7.9 33 273-305 25-68 (243)
350 4g1u_C Hemin import ATP-bindin 96.1 0.029 9.8E-07 51.6 10.3 23 273-295 38-60 (266)
351 2qp9_X Vacuolar protein sortin 96.1 0.0027 9.3E-08 60.9 3.5 30 273-302 85-114 (355)
352 2og2_A Putative signal recogni 96.1 0.023 7.9E-07 54.7 9.9 37 271-307 156-197 (359)
353 1ofh_A ATP-dependent HSL prote 96.1 0.0021 7.3E-08 59.4 2.5 34 272-305 50-85 (310)
354 1um8_A ATP-dependent CLP prote 96.1 0.0027 9.1E-08 61.2 3.1 29 273-301 73-101 (376)
355 1xjc_A MOBB protein homolog; s 96.1 0.0046 1.6E-07 53.2 4.3 24 272-295 4-27 (169)
356 3bos_A Putative DNA replicatio 96.1 0.0028 9.7E-08 56.0 3.1 35 272-306 52-91 (242)
357 3d8b_A Fidgetin-like protein 1 96.1 0.0039 1.3E-07 59.8 4.2 34 272-305 117-152 (357)
358 1tue_A Replication protein E1; 96.1 0.0022 7.5E-08 57.1 2.2 30 272-301 58-87 (212)
359 2ga8_A Hypothetical 39.9 kDa p 96.1 0.0017 5.7E-08 62.5 1.5 29 272-300 24-52 (359)
360 3hr8_A Protein RECA; alpha and 96.0 0.015 5.2E-07 55.9 8.2 34 272-305 61-99 (356)
361 3czq_A Putative polyphosphate 96.0 0.0057 2E-07 57.5 5.1 98 270-367 84-207 (304)
362 1c9k_A COBU, adenosylcobinamid 96.0 0.0032 1.1E-07 54.8 3.1 31 274-304 1-32 (180)
363 3bh0_A DNAB-like replicative h 96.0 0.023 8E-07 53.4 9.4 32 273-304 69-105 (315)
364 2w58_A DNAI, primosome compone 96.0 0.0034 1.2E-07 54.6 3.1 33 273-305 55-92 (202)
365 2r2a_A Uncharacterized protein 96.0 0.0038 1.3E-07 55.1 3.4 24 270-293 3-26 (199)
366 2qby_A CDC6 homolog 1, cell di 96.0 0.0076 2.6E-07 57.2 5.7 26 271-296 44-69 (386)
367 1iy2_A ATP-dependent metallopr 96.0 0.0034 1.2E-07 57.8 3.1 29 275-303 76-106 (278)
368 1pui_A ENGB, probable GTP-bind 96.0 0.019 6.7E-07 49.7 7.9 24 272-295 26-49 (210)
369 1np6_A Molybdopterin-guanine d 96.0 0.0038 1.3E-07 53.9 3.2 25 271-295 5-29 (174)
370 2r62_A Cell division protease 95.9 0.0013 4.3E-08 60.1 0.1 26 273-298 45-70 (268)
371 1fnn_A CDC6P, cell division co 95.9 0.022 7.6E-07 54.2 9.0 24 273-296 45-68 (389)
372 4a1f_A DNAB helicase, replicat 95.9 0.05 1.7E-06 51.9 11.2 33 273-305 47-84 (338)
373 1rj9_A FTSY, signal recognitio 95.9 0.018 6.2E-07 54.1 8.1 35 272-306 102-141 (304)
374 3nh6_A ATP-binding cassette SU 95.9 0.027 9.1E-07 53.0 9.2 24 273-296 81-104 (306)
375 1znw_A Guanylate kinase, GMP k 95.9 0.0039 1.3E-07 54.8 3.2 24 273-296 21-44 (207)
376 3p32_A Probable GTPase RV1496/ 95.9 0.039 1.3E-06 52.8 10.5 35 270-304 77-116 (355)
377 1ls1_A Signal recognition part 95.9 0.047 1.6E-06 50.9 10.8 36 272-307 98-138 (295)
378 1dek_A Deoxynucleoside monopho 95.9 0.0048 1.7E-07 56.1 3.8 32 273-304 2-33 (241)
379 3vfd_A Spastin; ATPase, microt 95.9 0.0047 1.6E-07 59.9 3.9 31 272-302 148-178 (389)
380 1pzn_A RAD51, DNA repair and r 95.9 0.05 1.7E-06 52.0 11.0 24 272-295 131-154 (349)
381 3aez_A Pantothenate kinase; tr 95.9 0.0052 1.8E-07 58.1 3.9 37 270-306 88-131 (312)
382 1svm_A Large T antigen; AAA+ f 95.8 0.0048 1.6E-07 59.9 3.7 33 270-302 167-199 (377)
383 1u0j_A DNA replication protein 95.8 0.0041 1.4E-07 57.4 3.1 51 242-295 77-127 (267)
384 3clv_A RAB5 protein, putative; 95.8 0.015 5.2E-07 49.5 6.6 28 268-295 3-30 (208)
385 2ehv_A Hypothetical protein PH 95.8 0.0043 1.5E-07 55.5 3.2 33 273-305 31-69 (251)
386 2z4s_A Chromosomal replication 95.8 0.012 4.2E-07 58.1 6.6 73 272-344 130-219 (440)
387 1z6g_A Guanylate kinase; struc 95.8 0.0039 1.3E-07 55.5 2.8 25 272-296 23-47 (218)
388 2f1r_A Molybdopterin-guanine d 95.8 0.0025 8.6E-08 54.9 1.2 25 271-295 1-25 (171)
389 2zan_A Vacuolar protein sortin 95.8 0.0056 1.9E-07 60.6 3.9 34 272-305 167-203 (444)
390 1u94_A RECA protein, recombina 95.8 0.018 6.3E-07 55.3 7.5 34 272-305 63-101 (356)
391 2gno_A DNA polymerase III, gam 95.8 0.032 1.1E-06 52.4 9.0 87 272-358 18-119 (305)
392 1s2o_A SPP, sucrose-phosphatas 95.7 0.0056 1.9E-07 55.2 3.5 65 24-114 2-67 (244)
393 2c9o_A RUVB-like 1; hexameric 95.7 0.0045 1.5E-07 61.5 2.9 25 273-297 64-88 (456)
394 3fvq_A Fe(3+) IONS import ATP- 95.6 0.053 1.8E-06 52.1 10.2 23 273-295 31-53 (359)
395 2ce7_A Cell division protein F 95.6 0.0056 1.9E-07 61.3 3.4 34 272-305 49-84 (476)
396 3tui_C Methionine import ATP-b 95.6 0.049 1.7E-06 52.5 9.7 23 273-295 55-77 (366)
397 1v5w_A DMC1, meiotic recombina 95.6 0.074 2.5E-06 50.6 10.9 35 271-305 121-166 (343)
398 2w0m_A SSO2452; RECA, SSPF, un 95.6 0.0065 2.2E-07 53.5 3.2 33 273-305 24-61 (235)
399 4fcw_A Chaperone protein CLPB; 95.6 0.0062 2.1E-07 56.5 3.2 34 273-306 48-86 (311)
400 2i1q_A DNA repair and recombin 95.6 0.022 7.4E-07 53.6 7.0 23 272-294 98-120 (322)
401 1htw_A HI0065; nucleotide-bind 95.5 0.0083 2.8E-07 50.9 3.5 26 271-296 32-57 (158)
402 2yyz_A Sugar ABC transporter, 95.5 0.067 2.3E-06 51.4 10.1 23 273-295 30-52 (359)
403 1a5t_A Delta prime, HOLB; zinc 95.4 0.043 1.5E-06 51.9 8.7 26 271-296 23-48 (334)
404 2bjv_A PSP operon transcriptio 95.4 0.01 3.4E-07 54.0 4.1 34 273-306 30-68 (265)
405 3shq_A UBLCP1; phosphatase, hy 95.4 0.02 6.9E-07 54.2 6.2 104 22-151 137-257 (320)
406 3jvv_A Twitching mobility prot 95.4 0.061 2.1E-06 51.6 9.7 87 272-360 123-232 (356)
407 4g63_A Cytosolic IMP-GMP speci 95.4 0.032 1.1E-06 55.5 7.8 100 55-182 187-322 (470)
408 1z47_A CYSA, putative ABC-tran 95.4 0.061 2.1E-06 51.6 9.6 23 273-295 42-64 (355)
409 1xp8_A RECA protein, recombina 95.4 0.024 8.4E-07 54.7 6.9 33 273-305 75-112 (366)
410 2r44_A Uncharacterized protein 95.4 0.0064 2.2E-07 57.2 2.6 24 274-297 48-71 (331)
411 2z43_A DNA repair and recombin 95.4 0.034 1.2E-06 52.4 7.7 34 272-305 107-151 (324)
412 3cf2_A TER ATPase, transitiona 95.4 0.018 6.3E-07 61.1 6.3 34 271-304 510-543 (806)
413 4as2_A Phosphorylcholine phosp 95.3 0.01 3.5E-07 56.4 3.9 24 55-78 144-167 (327)
414 4dhe_A Probable GTP-binding pr 95.3 0.08 2.8E-06 46.1 9.5 90 272-361 29-156 (223)
415 1ly1_A Polynucleotide kinase; 95.3 0.0041 1.4E-07 52.6 1.0 36 224-259 3-39 (181)
416 2q6t_A DNAB replication FORK h 95.3 0.077 2.6E-06 52.3 10.3 32 273-304 201-238 (444)
417 3hu3_A Transitional endoplasmi 95.3 0.012 4E-07 59.2 4.3 33 270-302 236-268 (489)
418 1v43_A Sugar-binding transport 95.2 0.058 2E-06 52.2 8.9 23 273-295 38-60 (372)
419 2eyu_A Twitching motility prot 95.2 0.011 3.7E-07 54.3 3.6 81 272-354 25-128 (261)
420 3tif_A Uncharacterized ABC tra 95.2 0.0092 3.1E-07 53.9 3.0 23 273-295 32-54 (235)
421 4dcu_A GTP-binding protein ENG 95.2 0.085 2.9E-06 52.1 10.2 89 273-361 24-143 (456)
422 4gp7_A Metallophosphoesterase; 95.2 0.024 8.2E-07 48.2 5.4 36 221-258 7-42 (171)
423 2dhr_A FTSH; AAA+ protein, hex 95.2 0.0091 3.1E-07 60.1 3.1 33 274-306 66-100 (499)
424 1cr0_A DNA primase/helicase; R 95.1 0.011 3.6E-07 54.9 3.1 23 273-295 36-58 (296)
425 2qen_A Walker-type ATPase; unk 95.1 0.017 5.7E-07 54.0 4.5 32 273-304 32-63 (350)
426 1ypw_A Transitional endoplasmi 95.1 0.014 4.7E-07 62.3 4.3 33 270-302 236-268 (806)
427 2pcj_A ABC transporter, lipopr 95.0 0.01 3.6E-07 53.1 2.8 23 273-295 31-53 (224)
428 2r6a_A DNAB helicase, replicat 95.0 0.092 3.1E-06 51.9 10.0 33 273-305 204-242 (454)
429 3iev_A GTP-binding protein ERA 95.0 0.16 5.3E-06 47.5 11.1 93 268-360 6-133 (308)
430 3m6a_A ATP-dependent protease 95.0 0.012 4.2E-07 59.7 3.6 26 272-297 108-133 (543)
431 3bgw_A DNAB-like replicative h 95.0 0.058 2E-06 53.3 8.3 32 273-304 198-234 (444)
432 2wsm_A Hydrogenase expression/ 95.0 0.018 6.2E-07 50.4 4.2 36 270-305 28-67 (221)
433 2i3b_A HCR-ntpase, human cance 95.0 0.011 3.6E-07 51.7 2.6 22 274-295 3-24 (189)
434 2cbz_A Multidrug resistance-as 94.9 0.012 4.3E-07 53.1 3.0 24 273-296 32-55 (237)
435 1nlf_A Regulatory protein REPA 94.9 0.013 4.6E-07 53.8 3.1 22 273-294 31-52 (279)
436 2v9p_A Replication protein E1; 94.9 0.014 4.8E-07 54.9 3.3 25 272-296 126-150 (305)
437 3dm5_A SRP54, signal recogniti 94.9 0.45 1.5E-05 46.9 14.2 23 222-244 99-121 (443)
438 3j08_A COPA, copper-exporting 94.8 0.058 2E-06 56.0 8.1 84 55-180 458-541 (645)
439 1mv5_A LMRA, multidrug resista 94.8 0.016 5.3E-07 52.6 3.4 23 273-295 29-51 (243)
440 2onk_A Molybdate/tungstate ABC 94.8 0.015 5.3E-07 52.6 3.3 23 273-295 25-47 (240)
441 1g8p_A Magnesium-chelatase 38 94.8 0.0077 2.6E-07 56.8 1.3 23 275-297 48-70 (350)
442 3gfo_A Cobalt import ATP-bindi 94.8 0.015 5.1E-07 53.9 3.1 23 273-295 35-57 (275)
443 3kta_A Chromosome segregation 94.8 0.016 5.4E-07 49.4 3.1 22 273-294 27-48 (182)
444 2ce2_X GTPase HRAS; signaling 94.7 0.019 6.6E-07 46.9 3.5 22 274-295 5-26 (166)
445 3b85_A Phosphate starvation-in 94.7 0.013 4.5E-07 51.9 2.5 22 273-294 23-44 (208)
446 1b0u_A Histidine permease; ABC 94.7 0.015 5.2E-07 53.3 3.0 23 273-295 33-55 (262)
447 3pxg_A Negative regulator of g 94.7 0.013 4.4E-07 58.4 2.7 25 272-296 201-225 (468)
448 1ko7_A HPR kinase/phosphatase; 94.7 0.021 7.3E-07 53.9 4.1 33 273-306 145-177 (314)
449 1ji0_A ABC transporter; ATP bi 94.7 0.016 5.4E-07 52.5 3.0 23 273-295 33-55 (240)
450 2ff7_A Alpha-hemolysin translo 94.7 0.016 5.4E-07 52.8 3.0 23 273-295 36-58 (247)
451 3pxi_A Negative regulator of g 94.7 0.026 8.8E-07 59.6 5.1 26 271-296 200-225 (758)
452 1g6h_A High-affinity branched- 94.7 0.016 5.5E-07 53.0 3.0 23 273-295 34-56 (257)
453 2d2e_A SUFC protein; ABC-ATPas 94.6 0.017 5.9E-07 52.6 3.2 23 273-295 30-52 (250)
454 2pze_A Cystic fibrosis transme 94.6 0.016 5.6E-07 52.0 3.0 24 273-296 35-58 (229)
455 1sgw_A Putative ABC transporte 94.6 0.014 4.7E-07 52.1 2.4 23 273-295 36-58 (214)
456 1yrb_A ATP(GTP)binding protein 94.6 0.036 1.2E-06 50.0 5.3 34 272-305 14-51 (262)
457 4fe3_A Cytosolic 5'-nucleotida 94.6 0.021 7.1E-07 53.0 3.7 41 55-107 142-182 (297)
458 2orw_A Thymidine kinase; TMTK, 94.6 0.016 5.4E-07 50.2 2.7 23 273-295 4-26 (184)
459 2olj_A Amino acid ABC transpor 94.6 0.017 5.7E-07 53.2 3.0 23 273-295 51-73 (263)
460 2qgz_A Helicase loader, putati 94.6 0.016 5.5E-07 54.4 2.9 24 272-295 152-175 (308)
461 2p67_A LAO/AO transport system 94.6 0.19 6.5E-06 47.6 10.5 36 270-305 54-94 (341)
462 2ixe_A Antigen peptide transpo 94.5 0.018 6.1E-07 53.2 3.0 23 273-295 46-68 (271)
463 2zts_A Putative uncharacterize 94.5 0.02 6.7E-07 51.0 3.2 33 273-305 31-69 (251)
464 2ghi_A Transport protein; mult 94.5 0.018 6.2E-07 52.8 3.0 23 273-295 47-69 (260)
465 1knx_A Probable HPR(Ser) kinas 94.5 0.021 7.3E-07 53.8 3.5 33 273-306 148-180 (312)
466 1w5s_A Origin recognition comp 94.5 0.11 3.7E-06 49.8 8.7 26 271-296 49-76 (412)
467 1vpl_A ABC transporter, ATP-bi 94.5 0.019 6.3E-07 52.6 3.0 23 273-295 42-64 (256)
468 2zu0_C Probable ATP-dependent 94.5 0.02 6.7E-07 52.8 3.2 23 273-295 47-69 (267)
469 3nbx_X ATPase RAVA; AAA+ ATPas 94.5 0.018 6E-07 58.0 3.1 23 274-296 43-65 (500)
470 2qi9_C Vitamin B12 import ATP- 94.4 0.019 6.5E-07 52.3 3.0 23 273-295 27-49 (249)
471 2yz2_A Putative ABC transporte 94.4 0.02 6.8E-07 52.7 3.0 23 273-295 34-56 (266)
472 1nij_A Hypothetical protein YJ 94.4 0.026 9E-07 53.1 4.0 24 272-295 4-27 (318)
473 2ihy_A ABC transporter, ATP-bi 94.3 0.02 6.9E-07 53.1 3.0 23 273-295 48-70 (279)
474 1q57_A DNA primase/helicase; d 94.3 0.14 4.7E-06 51.2 9.3 32 273-304 243-280 (503)
475 4gxt_A A conserved functionall 94.3 0.032 1.1E-06 54.2 4.5 88 55-175 222-330 (385)
476 1oix_A RAS-related protein RAB 94.3 0.021 7.3E-07 49.1 2.9 23 273-295 30-52 (191)
477 3qf4_A ABC transporter, ATP-bi 94.3 0.23 8E-06 50.7 11.1 24 273-296 370-393 (587)
478 1z2a_A RAS-related protein RAB 94.3 0.024 8.3E-07 46.7 3.1 23 273-295 6-28 (168)
479 2nq2_C Hypothetical ABC transp 94.3 0.022 7.4E-07 52.1 2.9 23 273-295 32-54 (253)
480 2wjg_A FEOB, ferrous iron tran 94.2 0.03 1E-06 47.3 3.7 22 273-294 8-29 (188)
481 1r6b_X CLPA protein; AAA+, N-t 94.2 0.065 2.2E-06 56.4 7.0 72 261-332 196-288 (758)
482 1ojl_A Transcriptional regulat 94.2 0.033 1.1E-06 52.1 4.2 34 273-306 26-64 (304)
483 2f9l_A RAB11B, member RAS onco 94.2 0.025 8.4E-07 48.8 3.1 23 273-295 6-28 (199)
484 2ewv_A Twitching motility prot 94.2 0.028 9.7E-07 54.3 3.8 25 271-295 135-159 (372)
485 1gvn_B Zeta; postsegregational 94.2 0.014 4.9E-07 54.2 1.6 39 220-258 30-70 (287)
486 2gza_A Type IV secretion syste 94.2 0.021 7.1E-07 54.9 2.8 24 273-296 176-199 (361)
487 3sop_A Neuronal-specific septi 94.2 0.022 7.6E-07 52.5 2.8 22 274-295 4-25 (270)
488 1lw7_A Transcriptional regulat 94.1 0.027 9.1E-07 54.1 3.4 25 273-297 171-195 (365)
489 2wji_A Ferrous iron transport 94.1 0.032 1.1E-06 46.5 3.5 22 273-294 4-25 (165)
490 2zej_A Dardarin, leucine-rich 94.1 0.026 9.1E-07 48.0 3.0 21 274-294 4-24 (184)
491 1kao_A RAP2A; GTP-binding prot 94.0 0.029 9.9E-07 46.0 3.1 22 273-294 4-25 (167)
492 2pjz_A Hypothetical protein ST 94.0 0.028 9.5E-07 51.7 3.1 24 272-295 30-53 (263)
493 1wf3_A GTP-binding protein; GT 94.0 0.26 9E-06 45.9 9.9 89 273-361 8-129 (301)
494 2ged_A SR-beta, signal recogni 94.0 0.024 8.3E-07 48.2 2.6 25 271-295 47-71 (193)
495 3ozx_A RNAse L inhibitor; ATP 94.0 0.31 1E-05 49.4 11.0 24 272-295 294-317 (538)
496 2fna_A Conserved hypothetical 94.0 0.071 2.4E-06 49.7 6.0 33 273-305 31-65 (357)
497 3rfu_A Copper efflux ATPase; a 93.9 0.17 5.7E-06 53.3 9.3 106 25-180 534-639 (736)
498 1u8z_A RAS-related protein RAL 93.9 0.031 1.1E-06 45.8 3.1 22 273-294 5-26 (168)
499 2qm8_A GTPase/ATPase; G protei 93.9 0.039 1.3E-06 52.5 4.1 25 270-294 53-77 (337)
500 2hf9_A Probable hydrogenase ni 93.9 0.034 1.2E-06 48.8 3.4 25 271-295 37-61 (226)
No 1
>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*
Probab=100.00 E-value=7.1e-60 Score=470.59 Aligned_cols=316 Identities=48% Similarity=0.818 Sum_probs=287.5
Q ss_pred CCcEEecCceEEEEecCCCCCCceEEEEecCCceeecCCCCCCCCCccccccccccHHHHHHHHHHCCcEEEEEecCCCc
Q psy4598 3 GSWDIVDNGKLLVFTSNDVCNSAKIASFDLDGTLITTKSGKVFPVDTHDWKLLFSNIESVLKQYLDDGYKLVIFTNQGAI 82 (369)
Q Consensus 3 ~~W~~~~~~~~~~~~~~~~~~~~k~~~fDlDgTLi~~~sg~~~~~~~~d~~~~~p~v~~~L~~L~~~G~~i~i~TNq~gi 82 (369)
..|+.++ ++++|+.+.+..+.|+++||+||||+.+.+|..|.....+|.+++||+.++|+.|+++||+++|+|||+|+
T Consensus 38 ~~W~~~~--~~~~~~~~~~~~~~k~v~fD~DGTL~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTN~~gi 115 (416)
T 3zvl_A 38 LGWESLK--KLLVFTASGVKPQGKVAAFDLDGTLITTRSGKVFPTSPSDWRILYPEIPKKLQELAAEGYKLVIFTNQMGI 115 (416)
T ss_dssp CEEEEET--TEEEEECTTCCCCSSEEEECSBTTTEECSSCSSSCSSTTCCEESCTTHHHHHHHHHHTTCEEEEEEECHHH
T ss_pred cCceecC--cEEEecCCCCCCCCeEEEEeCCCCccccCCCccCCCCHHHhhhhcccHHHHHHHHHHCCCeEEEEeCCccc
Confidence 4599998 47999999999999999999999999999888999999999989999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCCCCCCCCchhHHHHHHHHhcCCccccCCccEEeeCccccccccCCC-C
Q psy4598 83 GRKKMSTRDFQAKAEKIIKSLNVPVQMFVATQYDRYRKPVPGMWEYLSQEKNGDLAIDISQSFYAGDAAGRAANWAPK-K 161 (369)
Q Consensus 83 ~~~~~~~~~~~~~i~~~l~~l~i~~~~~~~~~~~~~rKP~~gm~~~~~~~~~~~~~i~~~~s~~VGD~~gr~~~~~~~-~ 161 (369)
++|+++...+..++..+++.+|++|++++|++++.++||+|+||+.++++++.++++++++|+||||++||+++|.++ +
T Consensus 116 ~~g~~~~~~~~~~~~~~l~~lgl~fd~i~~~~~~~~~KP~p~~~~~a~~~l~~~~~v~~~~~l~VGDs~gr~~~~~~~~~ 195 (416)
T 3zvl_A 116 GRGKLPAEVFKGKVEAVLEKLGVPFQVLVATHAGLNRKPVSGMWDHLQEQANEGIPISVEDSVFVGDAAGRLANWAPGRK 195 (416)
T ss_dssp HTTSSCHHHHHHHHHHHHHHHTSCCEEEEECSSSTTSTTSSHHHHHHHHHSSTTCCCCGGGCEEECSCSCBCTTSSTTCC
T ss_pred cCCCCCHHHHHHHHHHHHHHcCCCEEEEEECCCCCCCCCCHHHHHHHHHHhCCCCCCCHHHeEEEECCCCCccccccccc
Confidence 999999999999999999999999999999999999999999999999997655569999999999999999999984 6
Q ss_pred CCCCCcccHHHHHhCCCCccCchhhccCCCCCCCCCCCCCCcchhccccccCCCCCCCCCCceEEEEEcCCCCCcchhhh
Q psy4598 162 KKDFACTDHLFAFNLNLAFFTPEQIFLNEKAPDFPNLPTFKPREVYQKAQSQTIPNIPHDKKQVLIMIGSQGSGKSSFVS 241 (369)
Q Consensus 162 ~~d~s~~D~~~A~n~Gi~f~~pe~~f~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~i~v~~g~~~~gks~~~~ 241 (369)
|||||++|+++|+|+||+|++||+||++++..+| .+|+|+|+.+....+.+. |.++
T Consensus 196 ~~d~s~~Di~~A~~aGi~f~~pe~~f~~~~~~~~-~~~~f~p~~~~~~~~~~~-----------------p~~~------ 251 (416)
T 3zvl_A 196 KKDFSCADRLFALNVGLPFATPEEFFLKWPAARF-ELPAFDPRTISSAGPLYL-----------------PESS------ 251 (416)
T ss_dssp SCCSCCHHHHHHHHHTCCEECHHHHHSCCCCCCB-CCCSCCGGGCCSCSCSSB-----------------STTS------
T ss_pred ccCCChhhHHHHHHcCCcccCcHHhhCCCCcCcc-ccCCCChhhhcccccccC-----------------CCcc------
Confidence 9999999999999999999999999999998888 789999988754332210 0000
Q ss_pred hccCCCcccccccccccchhhhhhhccccccEEEEEEcCCCCcHHHHHHHHhccCCcEEEeCCcchhHHHHHHHHHHHHh
Q psy4598 242 TYLKPLNYTTVNRDTLGSWQKCVSVMKAALDSVLIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTLGSWQKCVSVMKAALD 321 (369)
Q Consensus 242 ~~~~~~~~~~i~r~~~~~~~~~~~~~~~~~~~lIll~G~pGSGKSTla~~L~~~~~~~~i~~D~~~~~~~~~~~~~~~l~ 321 (369)
....+.+.+|+|+|+|||||||+++.|++.+++.+|+.|.++.|+.+...+..++.
T Consensus 252 ------------------------~~~~~~~~lIil~G~pGSGKSTla~~L~~~~~~~~i~~D~~~~~~~~~~~~~~~l~ 307 (416)
T 3zvl_A 252 ------------------------SLLSPNPEVVVAVGFPGAGKSTFIQEHLVSAGYVHVNRDTLGSWQRCVSSCQAALR 307 (416)
T ss_dssp ------------------------CSCCSSCCEEEEESCTTSSHHHHHHHHTGGGTCEECCGGGSCSHHHHHHHHHHHHH
T ss_pred ------------------------ccCCCCCEEEEEECCCCCCHHHHHHHHHHhcCcEEEccchHHHHHHHHHHHHHHHh
Confidence 01123457899999999999999999999999999999999999999999999999
Q ss_pred CCCcEEEeCCCCCHHHHHHHHHHHHhcCCeEEEEEEeCCHHHHHHHc
Q psy4598 322 SGLSVVVDNTNPDKESRHRYIEAAKQHGVRCIAVHMNISKEHAKHNI 368 (369)
Q Consensus 322 ~g~~vIiD~tn~~~~~r~~~~~la~~~~~~v~~v~l~~~~e~~~~Rn 368 (369)
.|.+||+|+++.....|..++++++++++.+.+|++++|.+++++|+
T Consensus 308 ~g~~vIiD~~~~~~~~r~~~~~~~~~~~~~~~~v~l~~~~e~l~~R~ 354 (416)
T 3zvl_A 308 QGKRVVIDNTNPDVPSRARYIQCAKDAGVPCRCFNFCATIEQARHNN 354 (416)
T ss_dssp TTCCEEEESCCCSHHHHHHHHHHHHHHTCCEEEEEECCCHHHHHHHH
T ss_pred cCCcEEEeCCCCCHHHHHHHHHHHHHcCCeEEEEEEeCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999996
No 2
>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*
Probab=99.90 E-value=1.4e-23 Score=184.42 Aligned_cols=140 Identities=27% Similarity=0.324 Sum_probs=115.6
Q ss_pred CCceEEEEecCCceeecCCCCCCCCCccccccccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHH---HHHHHH
Q psy4598 23 NSAKIASFDLDGTLITTKSGKVFPVDTHDWKLLFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQ---AKAEKI 99 (369)
Q Consensus 23 ~~~k~~~fDlDgTLi~~~sg~~~~~~~~d~~~~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~---~~i~~~ 99 (369)
+..|+++||+||||+.+.++..+.....++. ++|++.+.|++|+++||+++|+||++++.+|+++...+. ..+..+
T Consensus 12 ~~~k~~~~D~Dgtl~~~~~~~~~~~~~~~~~-~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~ 90 (176)
T 2fpr_A 12 SSQKYLFIDRDGTLISEPPSDFQVDRFDKLA-FEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQI 90 (176)
T ss_dssp -CCEEEEECSBTTTBCCC--CCCCCSGGGCC-BCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHH
T ss_pred CcCcEEEEeCCCCeEcCCCCCcCcCCHHHCc-CCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHH
Confidence 4679999999999998876544455555665 799999999999999999999999999999999888763 467788
Q ss_pred HHHcCCCeEEE-Ee----cCCCCCCCCchhHHHHHHHHhcCCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHH
Q psy4598 100 IKSLNVPVQMF-VA----TQYDRYRKPVPGMWEYLSQEKNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAF 174 (369)
Q Consensus 100 l~~l~i~~~~~-~~----~~~~~~rKP~~gm~~~~~~~~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~ 174 (369)
++.+|++|+.+ ++ .++..++||+|+||+.+++++ ++++++++||||+. .|+++|+
T Consensus 91 l~~~gl~fd~v~~s~~~~~~~~~~~KP~p~~~~~~~~~~----gi~~~~~l~VGD~~----------------~Di~~A~ 150 (176)
T 2fpr_A 91 FTSQGVQFDEVLICPHLPADECDCRKPKVKLVERYLAEQ----AMDRANSYVIGDRA----------------TDIQLAE 150 (176)
T ss_dssp HHHTTCCEEEEEEECCCGGGCCSSSTTSCGGGGGGC--------CCGGGCEEEESSH----------------HHHHHHH
T ss_pred HHHcCCCeeEEEEcCCCCcccccccCCCHHHHHHHHHHc----CCCHHHEEEEcCCH----------------HHHHHHH
Confidence 99999998755 45 267789999999999999885 78999999999999 8999999
Q ss_pred hCCCCccCc
Q psy4598 175 NLNLAFFTP 183 (369)
Q Consensus 175 n~Gi~f~~p 183 (369)
++||+++..
T Consensus 151 ~aG~~~i~v 159 (176)
T 2fpr_A 151 NMGINGLRY 159 (176)
T ss_dssp HHTSEEEEC
T ss_pred HcCCeEEEE
Confidence 999998643
No 3
>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}
Probab=99.89 E-value=8.9e-23 Score=178.32 Aligned_cols=136 Identities=20% Similarity=0.325 Sum_probs=117.3
Q ss_pred ceEEEEecCCceeecCCCCCCCCCccccccccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHH---HHHHHHHH
Q psy4598 25 AKIASFDLDGTLITTKSGKVFPVDTHDWKLLFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQ---AKAEKIIK 101 (369)
Q Consensus 25 ~k~~~fDlDgTLi~~~sg~~~~~~~~d~~~~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~---~~i~~~l~ 101 (369)
.|+++||+||||+.+. ..|.....++. ++|++.++|++|+++|++++|+||++.++++.++...+. +.+..+++
T Consensus 1 ~k~v~~D~DGtL~~~~--~~~~~~~~~~~-~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~ 77 (179)
T 3l8h_A 1 MKLIILDRDGVVNQDS--DAFVKSPDEWI-ALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALA 77 (179)
T ss_dssp CCEEEECSBTTTBCCC--TTCCCSGGGCC-BCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHH
T ss_pred CCEEEEcCCCccccCC--CccCCCHHHce-ECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHH
Confidence 3789999999999764 35888888888 699999999999999999999999999999998887766 45677788
Q ss_pred HcCCCeEE-EEe----cCCCCCCCCchhHHHHHHHHhcCCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhC
Q psy4598 102 SLNVPVQM-FVA----TQYDRYRKPVPGMWEYLSQEKNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNL 176 (369)
Q Consensus 102 ~l~i~~~~-~~~----~~~~~~rKP~~gm~~~~~~~~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~ 176 (369)
.+|.+|+. +.+ .+...++||+|++|+.+++++ ++++++++||||+. +|+++|+++
T Consensus 78 ~~g~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~~----~~~~~~~~~vGD~~----------------~Di~~a~~a 137 (179)
T 3l8h_A 78 QMGGVVDAIFMCPHGPDDGCACRKPLPGMYRDIARRY----DVDLAGVPAVGDSL----------------RDLQAAAQA 137 (179)
T ss_dssp HTTCCCCEEEEECCCTTSCCSSSTTSSHHHHHHHHHH----TCCCTTCEEEESSH----------------HHHHHHHHH
T ss_pred hCCCceeEEEEcCCCCCCCCCCCCCCHHHHHHHHHHc----CCCHHHEEEECCCH----------------HHHHHHHHC
Confidence 99976764 333 356678999999999999996 79999999999998 899999999
Q ss_pred CCCccCc
Q psy4598 177 NLAFFTP 183 (369)
Q Consensus 177 Gi~f~~p 183 (369)
|++++..
T Consensus 138 G~~~i~v 144 (179)
T 3l8h_A 138 GCAPWLV 144 (179)
T ss_dssp TCEEEEE
T ss_pred CCcEEEE
Confidence 9998643
No 4
>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*
Probab=99.84 E-value=7.5e-21 Score=171.50 Aligned_cols=146 Identities=23% Similarity=0.343 Sum_probs=114.2
Q ss_pred EEEecCCCCCCceEEEEecCCceeecCCCCCCCCCccccccccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHH-
Q psy4598 14 LVFTSNDVCNSAKIASFDLDGTLITTKSGKVFPVDTHDWKLLFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDF- 92 (369)
Q Consensus 14 ~~~~~~~~~~~~k~~~fDlDgTLi~~~sg~~~~~~~~d~~~~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~- 92 (369)
++-+-.-...+.|+++||+||||+... .|.....++. ++|++.++|++|+++|++++|+||++..+++.++.+.+
T Consensus 14 ~~~~~~~m~~~~k~v~~D~DGTL~~~~---~~~~~~~~~~-~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~ 89 (211)
T 2gmw_A 14 LVPRGSHMAKSVPAIFLDRDGTINVDH---GYVHEIDNFE-FIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFE 89 (211)
T ss_dssp ----------CBCEEEECSBTTTBCCC---SSCCSGGGCC-BCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHH
T ss_pred ccccchhhhhcCCEEEEcCCCCeECCC---CcccCcccCc-CCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHH
Confidence 555544445567899999999999764 4777776666 69999999999999999999999998776677766665
Q ss_pred --HHHHHHHHHHcCCCeE-EEEec-----------CCCCCCCCchhHHHHHHHHhcCCccccCCccEEeeCccccccccC
Q psy4598 93 --QAKAEKIIKSLNVPVQ-MFVAT-----------QYDRYRKPVPGMWEYLSQEKNGDLAIDISQSFYAGDAAGRAANWA 158 (369)
Q Consensus 93 --~~~i~~~l~~l~i~~~-~~~~~-----------~~~~~rKP~~gm~~~~~~~~~~~~~i~~~~s~~VGD~~gr~~~~~ 158 (369)
...+..+++.+|+.|+ +++++ +...++||+|.+|+.+++++ ++++++++||||+.
T Consensus 90 ~~~~~~~~~l~~~gl~f~~~~~~~~~~~~~~~~~~~~~~~~KP~p~~~~~~~~~l----gi~~~~~~~VGD~~------- 158 (211)
T 2gmw_A 90 TLTEWMDWSLADRDVDLDGIYYCPHHPQGSVEEFRQVCDCRKPHPGMLLSARDYL----HIDMAASYMVGDKL------- 158 (211)
T ss_dssp HHHHHHHHHHHHTTCCCSEEEEECCBTTCSSGGGBSCCSSSTTSCHHHHHHHHHH----TBCGGGCEEEESSH-------
T ss_pred HHHHHHHHHHHHcCCceEEEEECCcCCCCcccccCccCcCCCCCHHHHHHHHHHc----CCCHHHEEEEcCCH-------
Confidence 3456778889999875 45553 24667999999999999986 79999999999999
Q ss_pred CCCCCCCCcccHHHHHhCCCCc-cCc
Q psy4598 159 PKKKKDFACTDHLFAFNLNLAF-FTP 183 (369)
Q Consensus 159 ~~~~~d~s~~D~~~A~n~Gi~f-~~p 183 (369)
+|+.+|+++|+++ +..
T Consensus 159 ---------~Di~~a~~aG~~~~i~v 175 (211)
T 2gmw_A 159 ---------EDMQAAVAANVGTKVLV 175 (211)
T ss_dssp ---------HHHHHHHHTTCSEEEEE
T ss_pred ---------HHHHHHHHCCCceEEEE
Confidence 8999999999998 654
No 5
>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19
Probab=99.81 E-value=1e-19 Score=164.42 Aligned_cols=139 Identities=22% Similarity=0.289 Sum_probs=116.0
Q ss_pred CCCCceEEEEecCCceeecCCCCCCCCCccccccccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHH---HHHH
Q psy4598 21 VCNSAKIASFDLDGTLITTKSGKVFPVDTHDWKLLFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQ---AKAE 97 (369)
Q Consensus 21 ~~~~~k~~~fDlDgTLi~~~sg~~~~~~~~d~~~~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~---~~i~ 97 (369)
...+.|.++||+||||+... .|.....++. ++|++.++|++|+++|++++|+||++..+++.++.+.+. ..+.
T Consensus 27 ~~~~~k~i~~D~DGtl~~~~---~y~~~~~~~~-~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~ 102 (218)
T 2o2x_A 27 FPPHLPALFLDRDGTINVDT---DYPSDPAEIV-LRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVL 102 (218)
T ss_dssp CCSSCCCEEECSBTTTBCCC---SCTTCGGGCC-BCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHH
T ss_pred hhhcCCEEEEeCCCCcCCCC---cccCCcccCe-ECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHH
Confidence 34567999999999998653 5777777776 699999999999999999999999987777777665443 4567
Q ss_pred HHHHHcCCCeE-EEEec-----------CCCCCCCCchhHHHHHHHHhcCCccccCCccEEeeCccccccccCCCCCCCC
Q psy4598 98 KIIKSLNVPVQ-MFVAT-----------QYDRYRKPVPGMWEYLSQEKNGDLAIDISQSFYAGDAAGRAANWAPKKKKDF 165 (369)
Q Consensus 98 ~~l~~l~i~~~-~~~~~-----------~~~~~rKP~~gm~~~~~~~~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~ 165 (369)
.+++.+|+.|+ ++++. +...++||+|.||+.+++++ ++++++++||||+.
T Consensus 103 ~~l~~~gl~~~~~~~~~~~~~g~~~~~~~~~~~~KP~~~~~~~~~~~~----~i~~~~~~~VGD~~-------------- 164 (218)
T 2o2x_A 103 ELLREEGVFVDMVLACAYHEAGVGPLAIPDHPMRKPNPGMLVEAGKRL----ALDLQRSLIVGDKL-------------- 164 (218)
T ss_dssp HHHHHTTCCCSEEEEECCCTTCCSTTCCSSCTTSTTSCHHHHHHHHHH----TCCGGGCEEEESSH--------------
T ss_pred HHHHHcCCceeeEEEeecCCCCceeecccCCccCCCCHHHHHHHHHHc----CCCHHHEEEEeCCH--------------
Confidence 78899998765 45565 45678999999999999986 79999999999999
Q ss_pred CcccHHHHHhCCCCc-cCc
Q psy4598 166 ACTDHLFAFNLNLAF-FTP 183 (369)
Q Consensus 166 s~~D~~~A~n~Gi~f-~~p 183 (369)
+|+.+|+++|+++ +..
T Consensus 165 --~Di~~a~~aG~~~~i~v 181 (218)
T 2o2x_A 165 --ADMQAGKRAGLAQGWLV 181 (218)
T ss_dssp --HHHHHHHHTTCSEEEEE
T ss_pred --HHHHHHHHCCCCEeEEE
Confidence 8999999999998 653
No 6
>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}
Probab=99.80 E-value=4.4e-19 Score=156.89 Aligned_cols=129 Identities=16% Similarity=0.234 Sum_probs=103.9
Q ss_pred ceEEEEecCCceeecCCCCCCCCCcccc---ccccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHH
Q psy4598 25 AKIASFDLDGTLITTKSGKVFPVDTHDW---KLLFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIK 101 (369)
Q Consensus 25 ~k~~~fDlDgTLi~~~sg~~~~~~~~d~---~~~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~ 101 (369)
.|+++||+||||+.... ..|.....+. ..++||+.+.|++|+++|++++|+||++.. ....+..+++
T Consensus 3 ik~vifD~DgtL~~~~~-~~y~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~---------~~~~~~~~l~ 72 (189)
T 3ib6_A 3 LTHVIWDMGETLNTVPN-TRYDHHPLDTYPEVVLRKNAKETLEKVKQLGFKQAILSNTATS---------DTEVIKRVLT 72 (189)
T ss_dssp CCEEEECTBTTTBCCCT-TSSCSSCGGGCTTCCBCTTHHHHHHHHHHTTCEEEEEECCSSC---------CHHHHHHHHH
T ss_pred ceEEEEcCCCceeeccc-hhhhhHHHhccCCceeCcCHHHHHHHHHHCCCEEEEEECCCcc---------chHHHHHHHH
Confidence 58999999999987543 1233332221 347999999999999999999999996532 1234667788
Q ss_pred HcCC--CeEEEEecCCC----CCCCCchhHHHHHHHHhcCCccccCCccEEeeCc-cccccccCCCCCCCCCcccHHHHH
Q psy4598 102 SLNV--PVQMFVATQYD----RYRKPVPGMWEYLSQEKNGDLAIDISQSFYAGDA-AGRAANWAPKKKKDFACTDHLFAF 174 (369)
Q Consensus 102 ~l~i--~~~~~~~~~~~----~~rKP~~gm~~~~~~~~~~~~~i~~~~s~~VGD~-~gr~~~~~~~~~~d~s~~D~~~A~ 174 (369)
.+|+ .|+.++++++. .++||+|.+|+.+++++ ++++++++||||+ . .|+.+|+
T Consensus 73 ~~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~----~~~~~~~l~VGD~~~----------------~Di~~A~ 132 (189)
T 3ib6_A 73 NFGIIDYFDFIYASNSELQPGKMEKPDKTIFDFTLNAL----QIDKTEAVMVGNTFE----------------SDIIGAN 132 (189)
T ss_dssp HTTCGGGEEEEEECCTTSSTTCCCTTSHHHHHHHHHHH----TCCGGGEEEEESBTT----------------TTHHHHH
T ss_pred hcCchhheEEEEEccccccccCCCCcCHHHHHHHHHHc----CCCcccEEEECCCcH----------------HHHHHHH
Confidence 9998 48888888765 78999999999999996 7899999999999 6 8999999
Q ss_pred hCCCCccCc
Q psy4598 175 NLNLAFFTP 183 (369)
Q Consensus 175 n~Gi~f~~p 183 (369)
++|++++..
T Consensus 133 ~aG~~~i~v 141 (189)
T 3ib6_A 133 RAGIHAIWL 141 (189)
T ss_dssp HTTCEEEEE
T ss_pred HCCCeEEEE
Confidence 999998643
No 7
>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}
Probab=99.76 E-value=5.4e-19 Score=157.92 Aligned_cols=95 Identities=14% Similarity=0.122 Sum_probs=84.7
Q ss_pred ccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHcCCC--eEEEEecCCCCCCCCchhHHHHHHHH
Q psy4598 55 LFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSLNVP--VQMFVATQYDRYRKPVPGMWEYLSQE 132 (369)
Q Consensus 55 ~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l~i~--~~~~~~~~~~~~rKP~~gm~~~~~~~ 132 (369)
++||+.+.|+.|++.|++++|+||.+ ...+...++.+|+. |+.+++++....+||+|.+|+.++++
T Consensus 85 ~~pg~~~~l~~L~~~g~~~~i~tn~~------------~~~~~~~l~~~~l~~~fd~~~~~~~~~~~KP~p~~~~~a~~~ 152 (216)
T 3kbb_A 85 ENPGVREALEFVKSKRIKLALATSTP------------QREALERLRRLDLEKYFDVMVFGDQVKNGKPDPEIYLLVLER 152 (216)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECSSC------------HHHHHHHHHHTTCGGGCSEEECGGGSSSCTTSTHHHHHHHHH
T ss_pred cCccHHHHHHHHHHcCCCcccccCCc------------HHHHHHHHHhcCCCccccccccccccCCCcccHHHHHHHHHh
Confidence 57999999999999999999999943 23455667888884 89999999999999999999999999
Q ss_pred hcCCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCcc
Q psy4598 133 KNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFF 181 (369)
Q Consensus 133 ~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~ 181 (369)
+ +++|++|+||||+. .|+++|+++||+++
T Consensus 153 l----g~~p~e~l~VgDs~----------------~Di~aA~~aG~~~i 181 (216)
T 3kbb_A 153 L----NVVPEKVVVFEDSK----------------SGVEAAKSAGIERI 181 (216)
T ss_dssp H----TCCGGGEEEEECSH----------------HHHHHHHHTTCCCE
T ss_pred h----CCCccceEEEecCH----------------HHHHHHHHcCCcEE
Confidence 6 79999999999998 89999999999985
No 8
>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV}
Probab=99.75 E-value=1.8e-18 Score=154.61 Aligned_cols=122 Identities=14% Similarity=0.053 Sum_probs=93.4
Q ss_pred CCceEEEEecCCceeecCCCCCCCCCccc-----cccccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHH
Q psy4598 23 NSAKIASFDLDGTLITTKSGKVFPVDTHD-----WKLLFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAE 97 (369)
Q Consensus 23 ~~~k~~~fDlDgTLi~~~sg~~~~~~~~d-----~~~~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~ 97 (369)
...|+++||+||||+.- + +...... ...++||+.+.|+.|+++||+++|+||.+ .... .
T Consensus 4 ~~~kav~fDlDGTL~d~--~--~~~~~~~~~~~~~~~~~pg~~e~L~~L~~~g~~~~i~T~~~--------~~~~----~ 67 (196)
T 2oda_A 4 PTFPALLFGLSGCLVDF--G--AQAATSDTPDDEHAQLTPGAQNALKALRDQGMPCAWIDELP--------EALS----T 67 (196)
T ss_dssp -CCSCEEEETBTTTBCT--T--STTTSCSSCCGGGGSBCTTHHHHHHHHHHHTCCEEEECCSC--------HHHH----H
T ss_pred CcCCEEEEcCCCceEec--c--ccccchhhcccccCCcCcCHHHHHHHHHHCCCEEEEEcCCh--------HHHH----H
Confidence 34689999999999852 1 2222111 12369999999999999999999999843 1111 1
Q ss_pred HHHHHcCCCeEEEEecCCCCCCCCchhHHHHHHHHhcCCccccC-CccEEeeCccccccccCCCCCCCCCcccHHHHHhC
Q psy4598 98 KIIKSLNVPVQMFVATQYDRYRKPVPGMWEYLSQEKNGDLAIDI-SQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNL 176 (369)
Q Consensus 98 ~~l~~l~i~~~~~~~~~~~~~rKP~~gm~~~~~~~~~~~~~i~~-~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~ 176 (369)
.++ +..|+.+++.++...+||+|.+|..+++++ ++++ ++|+||||+. .|+++|+++
T Consensus 68 ~~~---~~~~d~v~~~~~~~~~KP~p~~~~~a~~~l----~~~~~~~~v~VGDs~----------------~Di~aA~~a 124 (196)
T 2oda_A 68 PLA---APVNDWMIAAPRPTAGWPQPDACWMALMAL----NVSQLEGCVLISGDP----------------RLLQSGLNA 124 (196)
T ss_dssp HHH---TTTTTTCEECCCCSSCTTSTHHHHHHHHHT----TCSCSTTCEEEESCH----------------HHHHHHHHH
T ss_pred Hhc---CccCCEEEECCcCCCCCCChHHHHHHHHHc----CCCCCccEEEEeCCH----------------HHHHHHHHC
Confidence 222 244677888888889999999999999986 6765 8999999999 899999999
Q ss_pred CCCccCc
Q psy4598 177 NLAFFTP 183 (369)
Q Consensus 177 Gi~f~~p 183 (369)
||.++..
T Consensus 125 G~~~i~v 131 (196)
T 2oda_A 125 GLWTIGL 131 (196)
T ss_dssp TCEEEEE
T ss_pred CCEEEEE
Confidence 9998643
No 9
>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}
Probab=99.71 E-value=1.8e-18 Score=143.21 Aligned_cols=113 Identities=15% Similarity=0.077 Sum_probs=91.8
Q ss_pred ceEEEEecCCceeecCCCCCCCCCccccccccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHcC
Q psy4598 25 AKIASFDLDGTLITTKSGKVFPVDTHDWKLLFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSLN 104 (369)
Q Consensus 25 ~k~~~fDlDgTLi~~~sg~~~~~~~~d~~~~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l~ 104 (369)
.|.++||+||||... ..++|++.+.|++|+++|++++|+||++.. . +..+++.+|
T Consensus 2 ~k~i~~D~DgtL~~~-------------~~~~~~~~~~l~~L~~~G~~~~i~S~~~~~--------~----~~~~l~~~~ 56 (137)
T 2pr7_A 2 MRGLIVDYAGVLDGT-------------DEDQRRWRNLLAAAKKNGVGTVILSNDPGG--------L----GAAPIRELE 56 (137)
T ss_dssp CCEEEECSTTTTSSC-------------HHHHHHHHHHHHHHHHTTCEEEEEECSCCG--------G----GGHHHHHHH
T ss_pred CcEEEEeccceecCC-------------CccCccHHHHHHHHHHCCCEEEEEeCCCHH--------H----HHHHHHHCC
Confidence 378999999999321 237999999999999999999999996531 1 223344444
Q ss_pred C--CeEEEEecCCCCCCCCchhHHHHHHHHhcCCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCccC
Q psy4598 105 V--PVQMFVATQYDRYRKPVPGMWEYLSQEKNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFFT 182 (369)
Q Consensus 105 i--~~~~~~~~~~~~~rKP~~gm~~~~~~~~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~~ 182 (369)
+ .|+.+++++....+||+|.+|+.+++++ ++++++++||||+. .|+.+|+++|+.++.
T Consensus 57 l~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~----~~~~~~~~~vgD~~----------------~di~~a~~~G~~~i~ 116 (137)
T 2pr7_A 57 TNGVVDKVLLSGELGVEKPEEAAFQAAADAI----DLPMRDCVLVDDSI----------------LNVRGAVEAGLVGVY 116 (137)
T ss_dssp HTTSSSEEEEHHHHSCCTTSHHHHHHHHHHT----TCCGGGEEEEESCH----------------HHHHHHHHHTCEEEE
T ss_pred hHhhccEEEEeccCCCCCCCHHHHHHHHHHc----CCCcccEEEEcCCH----------------HHHHHHHHCCCEEEE
Confidence 3 4777777777778999999999999986 68999999999999 899999999998853
No 10
>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}
Probab=99.67 E-value=5e-17 Score=149.04 Aligned_cols=96 Identities=11% Similarity=0.051 Sum_probs=84.2
Q ss_pred ccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHcCC--CeEEEEecCCCCCCCCchhHHHHHHHH
Q psy4598 55 LFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSLNV--PVQMFVATQYDRYRKPVPGMWEYLSQE 132 (369)
Q Consensus 55 ~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l~i--~~~~~~~~~~~~~rKP~~gm~~~~~~~ 132 (369)
++||+.+.|+.|+++|++++++||.. ....+++.+|+ +|+.+++.++...+||+|.+|..++++
T Consensus 96 ~~pg~~~ll~~L~~~g~~i~i~t~~~--------------~~~~~l~~~gl~~~fd~i~~~~~~~~~KP~p~~~~~a~~~ 161 (243)
T 4g9b_A 96 VLPGIRSLLADLRAQQISVGLASVSL--------------NAPTILAALELREFFTFCADASQLKNSKPDPEIFLAACAG 161 (243)
T ss_dssp BCTTHHHHHHHHHHTTCEEEECCCCT--------------THHHHHHHTTCGGGCSEECCGGGCSSCTTSTHHHHHHHHH
T ss_pred ccccHHHHHHhhhcccccceeccccc--------------chhhhhhhhhhccccccccccccccCCCCcHHHHHHHHHH
Confidence 57999999999999999999999942 12345778888 488899999999999999999999999
Q ss_pred hcCCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCccCch
Q psy4598 133 KNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFFTPE 184 (369)
Q Consensus 133 ~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~~pe 184 (369)
+ +++|++|+||||+. .|+++|+++||+++...
T Consensus 162 l----g~~p~e~l~VgDs~----------------~di~aA~~aG~~~I~V~ 193 (243)
T 4g9b_A 162 L----GVPPQACIGIEDAQ----------------AGIDAINASGMRSVGIG 193 (243)
T ss_dssp H----TSCGGGEEEEESSH----------------HHHHHHHHHTCEEEEES
T ss_pred c----CCChHHEEEEcCCH----------------HHHHHHHHcCCEEEEEC
Confidence 6 79999999999998 89999999999997553
No 11
>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}
Probab=99.66 E-value=1.8e-16 Score=145.91 Aligned_cols=94 Identities=14% Similarity=0.172 Sum_probs=82.2
Q ss_pred ccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHcCC--CeEEEEecCCCCCCCCchhHHHHHHHH
Q psy4598 55 LFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSLNV--PVQMFVATQYDRYRKPVPGMWEYLSQE 132 (369)
Q Consensus 55 ~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l~i--~~~~~~~~~~~~~rKP~~gm~~~~~~~ 132 (369)
++|++.+.|+.|++.|+++++.||.. ....+++.+|+ +|+.++++++...+||+|.+|..++++
T Consensus 117 ~~p~~~~ll~~Lk~~g~~i~i~~~~~--------------~~~~~L~~~gl~~~Fd~i~~~~~~~~~KP~p~~~~~a~~~ 182 (250)
T 4gib_A 117 ILPGIESLLIDVKSNNIKIGLSSASK--------------NAINVLNHLGISDKFDFIADAGKCKNNKPHPEIFLMSAKG 182 (250)
T ss_dssp SCTTHHHHHHHHHHTTCEEEECCSCT--------------THHHHHHHHTCGGGCSEECCGGGCCSCTTSSHHHHHHHHH
T ss_pred cchhHHHHHHHHHhcccccccccccc--------------hhhhHhhhcccccccceeecccccCCCCCcHHHHHHHHHH
Confidence 57999999999999999999988742 12345677888 488899999999999999999999999
Q ss_pred hcCCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCccC
Q psy4598 133 KNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFFT 182 (369)
Q Consensus 133 ~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~~ 182 (369)
+ +++|++|+||||+. .|+++|+++||+++.
T Consensus 183 l----g~~p~e~l~VGDs~----------------~Di~aA~~aG~~~i~ 212 (250)
T 4gib_A 183 L----NVNPQNCIGIEDAS----------------AGIDAINSANMFSVG 212 (250)
T ss_dssp H----TCCGGGEEEEESSH----------------HHHHHHHHTTCEEEE
T ss_pred h----CCChHHeEEECCCH----------------HHHHHHHHcCCEEEE
Confidence 6 79999999999998 899999999999863
No 12
>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=99.63 E-value=1.5e-16 Score=142.22 Aligned_cols=93 Identities=19% Similarity=0.228 Sum_probs=78.9
Q ss_pred ccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHcCCC--eEEEEecCCCCCCCCchhHHHHHHHH
Q psy4598 55 LFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSLNVP--VQMFVATQYDRYRKPVPGMWEYLSQE 132 (369)
Q Consensus 55 ~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l~i~--~~~~~~~~~~~~rKP~~gm~~~~~~~ 132 (369)
++||+.+.|+.|++ ||+++|+||.+ ...+..+++.+|+. |+.+++.+ ...||+|.+|..++++
T Consensus 85 ~~~g~~~~l~~L~~-~~~l~i~T~~~------------~~~~~~~l~~~gl~~~f~~i~~~~--~~~Kp~p~~~~~~~~~ 149 (210)
T 2ah5_A 85 LFPQIIDLLEELSS-SYPLYITTTKD------------TSTAQDMAKNLEIHHFFDGIYGSS--PEAPHKADVIHQALQT 149 (210)
T ss_dssp ECTTHHHHHHHHHT-TSCEEEEEEEE------------HHHHHHHHHHTTCGGGCSEEEEEC--SSCCSHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHc-CCeEEEEeCCC------------HHHHHHHHHhcCchhheeeeecCC--CCCCCChHHHHHHHHH
Confidence 57999999999999 99999999942 12345567888884 77777665 6799999999999999
Q ss_pred hcCCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCccC
Q psy4598 133 KNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFFT 182 (369)
Q Consensus 133 ~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~~ 182 (369)
+ +++|++|+||||+. .|+++|+++|++++.
T Consensus 150 l----g~~p~~~~~vgDs~----------------~Di~~a~~aG~~~i~ 179 (210)
T 2ah5_A 150 H----QLAPEQAIIIGDTK----------------FDMLGARETGIQKLA 179 (210)
T ss_dssp T----TCCGGGEEEEESSH----------------HHHHHHHHHTCEEEE
T ss_pred c----CCCcccEEEECCCH----------------HHHHHHHHCCCcEEE
Confidence 6 79999999999998 899999999998753
No 13
>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}
Probab=99.61 E-value=1.8e-15 Score=136.03 Aligned_cols=96 Identities=17% Similarity=0.189 Sum_probs=84.5
Q ss_pred ccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHcCCC--eEEEEecCCCCCCCCchhHHHHHHHH
Q psy4598 55 LFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSLNVP--VQMFVATQYDRYRKPVPGMWEYLSQE 132 (369)
Q Consensus 55 ~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l~i~--~~~~~~~~~~~~rKP~~gm~~~~~~~ 132 (369)
++|++.+.|+.|+++|++++|+||.. ...+..+++.+|+. |+.+++.+....+||+|.+++.++++
T Consensus 104 ~~~~~~~~l~~l~~~g~~~~i~T~~~------------~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~ 171 (231)
T 3kzx_A 104 LNDGAIELLDTLKENNITMAIVSNKN------------GERLRSEIHHKNLTHYFDSIIGSGDTGTIKPSPEPVLAALTN 171 (231)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEEEEE------------HHHHHHHHHHTTCGGGCSEEEEETSSSCCTTSSHHHHHHHHH
T ss_pred ECcCHHHHHHHHHHCCCeEEEEECCC------------HHHHHHHHHHCCchhheeeEEcccccCCCCCChHHHHHHHHH
Confidence 68999999999999999999999942 23456677888884 78888888888999999999999999
Q ss_pred hcCCccccCC-ccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCccC
Q psy4598 133 KNGDLAIDIS-QSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFFT 182 (369)
Q Consensus 133 ~~~~~~i~~~-~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~~ 182 (369)
+ +++++ +++||||+. .|+.+|+++|+.++.
T Consensus 172 l----gi~~~~~~v~vGD~~----------------~Di~~a~~aG~~~v~ 202 (231)
T 3kzx_A 172 I----NIEPSKEVFFIGDSI----------------SDIQSAIEAGCLPIK 202 (231)
T ss_dssp H----TCCCSTTEEEEESSH----------------HHHHHHHHTTCEEEE
T ss_pred c----CCCcccCEEEEcCCH----------------HHHHHHHHCCCeEEE
Confidence 6 79998 999999999 899999999998864
No 14
>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*
Probab=99.61 E-value=4.1e-16 Score=138.13 Aligned_cols=96 Identities=16% Similarity=0.157 Sum_probs=81.7
Q ss_pred ccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHcCCC--e--EEEEecCCCCCCCCchhHHHHHH
Q psy4598 55 LFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSLNVP--V--QMFVATQYDRYRKPVPGMWEYLS 130 (369)
Q Consensus 55 ~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l~i~--~--~~~~~~~~~~~rKP~~gm~~~~~ 130 (369)
++|++.+.|+.|++.|++++|+||.. ...+..+++.+|+. | +.+++.+. ..+||+|.+++.++
T Consensus 71 ~~~~~~~~l~~l~~~g~~~~i~s~~~------------~~~~~~~l~~~~l~~~f~~~~i~~~~~-~~~kp~~~~~~~~~ 137 (205)
T 3m9l_A 71 PAPGAVELVRELAGRGYRLGILTRNA------------RELAHVTLEAIGLADCFAEADVLGRDE-APPKPHPGGLLKLA 137 (205)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEECSSC------------HHHHHHHHHHTTCGGGSCGGGEECTTT-SCCTTSSHHHHHHH
T ss_pred CCccHHHHHHHHHhcCCeEEEEeCCc------------hHHHHHHHHHcCchhhcCcceEEeCCC-CCCCCCHHHHHHHH
Confidence 68999999999999999999999953 23456677888873 6 55666655 78999999999999
Q ss_pred HHhcCCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCccCc
Q psy4598 131 QEKNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFFTP 183 (369)
Q Consensus 131 ~~~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~~p 183 (369)
+++ ++++++++||||+. .|+.+|+++|++++..
T Consensus 138 ~~~----g~~~~~~i~iGD~~----------------~Di~~a~~aG~~~i~v 170 (205)
T 3m9l_A 138 EAW----DVSPSRMVMVGDYR----------------FDLDCGRAAGTRTVLV 170 (205)
T ss_dssp HHT----TCCGGGEEEEESSH----------------HHHHHHHHHTCEEEEC
T ss_pred HHc----CCCHHHEEEECCCH----------------HHHHHHHHcCCEEEEE
Confidence 996 79999999999999 8999999999987644
No 15
>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A
Probab=99.61 E-value=2.3e-15 Score=132.56 Aligned_cols=123 Identities=20% Similarity=0.173 Sum_probs=92.5
Q ss_pred CceEEEEecCCceeecCC-------------CCCCCCCccccccccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHH
Q psy4598 24 SAKIASFDLDGTLITTKS-------------GKVFPVDTHDWKLLFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTR 90 (369)
Q Consensus 24 ~~k~~~fDlDgTLi~~~s-------------g~~~~~~~~d~~~~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~ 90 (369)
+.|+++||+||||+.... +..+....... .++|++.+.|++|+++|++++|+||++.
T Consensus 26 ~~k~vifDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~e~L~~L~~~G~~v~ivT~~~~--------- 95 (187)
T 2wm8_A 26 LPKLAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQDV-RLYPEVPEVLKRLQSLGVPGAAASRTSE--------- 95 (187)
T ss_dssp SCSEEEECSBTTTBSSCTTTSSCSCCEECTTSCEECTTCCEE-CCCTTHHHHHHHHHHHTCCEEEEECCSC---------
T ss_pred ccCEEEEcCCCCcchHHHhhccCcchhhhcccchhhccCccc-CcchhHHHHHHHHHHCCceEEEEeCCCC---------
Confidence 468999999999984321 00011112223 3699999999999999999999999531
Q ss_pred HHHHHHHHHHHHcCCC--eEEEEecCCCCCCCCchhHHHHHHHHhcCCccccCCccEEeeCccccccccCCCCCCCCCcc
Q psy4598 91 DFQAKAEKIIKSLNVP--VQMFVATQYDRYRKPVPGMWEYLSQEKNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACT 168 (369)
Q Consensus 91 ~~~~~i~~~l~~l~i~--~~~~~~~~~~~~rKP~~gm~~~~~~~~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~ 168 (369)
...+..+++.+|+. |+.++.. .+|+|.++..+++++ ++++++++||||+. .
T Consensus 96 --~~~~~~~l~~~gl~~~f~~~~~~-----~~~k~~~~~~~~~~~----~~~~~~~~~igD~~----------------~ 148 (187)
T 2wm8_A 96 --IEGANQLLELFDLFRYFVHREIY-----PGSKITHFERLQQKT----GIPFSQMIFFDDER----------------R 148 (187)
T ss_dssp --HHHHHHHHHHTTCTTTEEEEEES-----SSCHHHHHHHHHHHH----CCCGGGEEEEESCH----------------H
T ss_pred --hHHHHHHHHHcCcHhhcceeEEE-----eCchHHHHHHHHHHc----CCChHHEEEEeCCc----------------c
Confidence 12355667888884 7754332 267889999999986 78999999999998 8
Q ss_pred cHHHHHhCCCCccCc
Q psy4598 169 DHLFAFNLNLAFFTP 183 (369)
Q Consensus 169 D~~~A~n~Gi~f~~p 183 (369)
|+.+|+++|++++..
T Consensus 149 Di~~a~~aG~~~i~v 163 (187)
T 2wm8_A 149 NIVDVSKLGVTCIHI 163 (187)
T ss_dssp HHHHHHTTTCEEEEC
T ss_pred ChHHHHHcCCEEEEE
Confidence 999999999998643
No 16
>2pib_A Phosphorylated carbohydrates phosphatase TM_1254; 3D-structure, structural genomics, NPPSFA; HET: MSE GOL; 1.73A {Thermotoga maritima MSB8} PDB: 3kbb_A*
Probab=99.60 E-value=7.4e-16 Score=135.68 Aligned_cols=95 Identities=14% Similarity=0.122 Sum_probs=84.6
Q ss_pred ccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHcCCC--eEEEEecCCCCCCCCchhHHHHHHHH
Q psy4598 55 LFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSLNVP--VQMFVATQYDRYRKPVPGMWEYLSQE 132 (369)
Q Consensus 55 ~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l~i~--~~~~~~~~~~~~rKP~~gm~~~~~~~ 132 (369)
++|++.+.|+.|++.|++++|+||.. ...+..+++.+|+. |+.+++.+.....||+|.+++.++++
T Consensus 85 ~~~~~~~~l~~l~~~g~~~~i~s~~~------------~~~~~~~l~~~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~ 152 (216)
T 2pib_A 85 ENPGVREALEFVKSKRIKLALATSTP------------QREALERLRRLDLEKYFDVMVFGDQVKNGKPDPEIYLLVLER 152 (216)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECSSC------------HHHHHHHHHHTTCGGGCSEEECGGGSSSCTTSTHHHHHHHHH
T ss_pred cCcCHHHHHHHHHHCCCCEEEEeCCc------------HHhHHHHHHhcChHHhcCEEeecccCCCCCcCcHHHHHHHHH
Confidence 68999999999999999999999943 23456677888885 88888888888999999999999999
Q ss_pred hcCCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCcc
Q psy4598 133 KNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFF 181 (369)
Q Consensus 133 ~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~ 181 (369)
+ ++++++++||||+. +|+.+|+++|++++
T Consensus 153 ~----~~~~~~~i~iGD~~----------------~Di~~a~~aG~~~i 181 (216)
T 2pib_A 153 L----NVVPEKVVVFEDSK----------------SGVEAAKSAGIERI 181 (216)
T ss_dssp H----TCCGGGEEEEECSH----------------HHHHHHHHTTCCEE
T ss_pred c----CCCCceEEEEeCcH----------------HHHHHHHHcCCcEE
Confidence 6 79999999999998 89999999999887
No 17
>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A
Probab=99.60 E-value=7.4e-16 Score=138.61 Aligned_cols=96 Identities=18% Similarity=0.233 Sum_probs=83.4
Q ss_pred ccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHcCCC--eEEEEecCCCCCCCCchhHHHHHHHH
Q psy4598 55 LFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSLNVP--VQMFVATQYDRYRKPVPGMWEYLSQE 132 (369)
Q Consensus 55 ~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l~i~--~~~~~~~~~~~~rKP~~gm~~~~~~~ 132 (369)
++|++.+.|+.|+++|++++|+||.+ ...+..+++.+|+. |+.+++.+....+||+|.+++.++++
T Consensus 96 ~~~~~~~~l~~l~~~g~~~~i~t~~~------------~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~ 163 (232)
T 1zrn_A 96 PFSEVPDSLRELKRRGLKLAILSNGS------------PQSIDAVVSHAGLRDGFDHLLSVDPVQVYKPDNRVYELAEQA 163 (232)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEESSC------------HHHHHHHHHHTTCGGGCSEEEESGGGTCCTTSHHHHHHHHHH
T ss_pred CCccHHHHHHHHHHCCCEEEEEeCCC------------HHHHHHHHHhcChHhhhheEEEecccCCCCCCHHHHHHHHHH
Confidence 57999999999999999999999953 12355667888874 77788888788999999999999998
Q ss_pred hcCCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCccC
Q psy4598 133 KNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFFT 182 (369)
Q Consensus 133 ~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~~ 182 (369)
+ ++++++++||||+. +|+.+|+++|+.++.
T Consensus 164 ~----~~~~~~~~~iGD~~----------------~Di~~a~~aG~~~~~ 193 (232)
T 1zrn_A 164 L----GLDRSAILFVASNA----------------WDATGARYFGFPTCW 193 (232)
T ss_dssp H----TSCGGGEEEEESCH----------------HHHHHHHHHTCCEEE
T ss_pred c----CCCcccEEEEeCCH----------------HHHHHHHHcCCEEEE
Confidence 6 78999999999998 899999999999864
No 18
>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*
Probab=99.60 E-value=2.3e-15 Score=136.41 Aligned_cols=96 Identities=13% Similarity=0.235 Sum_probs=83.6
Q ss_pred ccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHcCCC--eEEEEecCCCCCCCCchhHHHHHHHH
Q psy4598 55 LFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSLNVP--VQMFVATQYDRYRKPVPGMWEYLSQE 132 (369)
Q Consensus 55 ~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l~i~--~~~~~~~~~~~~rKP~~gm~~~~~~~ 132 (369)
++|++.+.|+.|+++|++++|+||.+ ...+..+++.+|+. |+.+++.+....+||+|.+++.++++
T Consensus 106 ~~~~~~~~l~~l~~~g~~~~i~s~~~------------~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~ 173 (240)
T 2no4_A 106 AYPDAAETLEKLKSAGYIVAILSNGN------------DEMLQAALKASKLDRVLDSCLSADDLKIYKPDPRIYQFACDR 173 (240)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEESSC------------HHHHHHHHHHTTCGGGCSEEEEGGGTTCCTTSHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHCCCEEEEEcCCC------------HHHHHHHHHhcCcHHHcCEEEEccccCCCCCCHHHHHHHHHH
Confidence 46999999999999999999999953 23456667888874 77788888888999999999999998
Q ss_pred hcCCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCccC
Q psy4598 133 KNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFFT 182 (369)
Q Consensus 133 ~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~~ 182 (369)
+ ++++++++||||+. .|+.+|+++|+.++.
T Consensus 174 ~----~~~~~~~~~iGD~~----------------~Di~~a~~aG~~~~~ 203 (240)
T 2no4_A 174 L----GVNPNEVCFVSSNA----------------WDLGGAGKFGFNTVR 203 (240)
T ss_dssp H----TCCGGGEEEEESCH----------------HHHHHHHHHTCEEEE
T ss_pred c----CCCcccEEEEeCCH----------------HHHHHHHHCCCEEEE
Confidence 6 79999999999998 899999999999864
No 19
>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A
Probab=99.60 E-value=9.4e-16 Score=138.09 Aligned_cols=97 Identities=18% Similarity=0.198 Sum_probs=84.3
Q ss_pred ccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHcCCC--eEEEEecCCCCCCCCchhHHHHHHHH
Q psy4598 55 LFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSLNVP--VQMFVATQYDRYRKPVPGMWEYLSQE 132 (369)
Q Consensus 55 ~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l~i~--~~~~~~~~~~~~rKP~~gm~~~~~~~ 132 (369)
++|++.+.|+.|++.|++++|+||.+ ...+..+++.+|+. |+.+++.++...+||+|.++..++++
T Consensus 84 ~~~~~~~~l~~l~~~g~~~~i~s~~~------------~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~ 151 (222)
T 2nyv_A 84 PYPEIPYTLEALKSKGFKLAVVSNKL------------EELSKKILDILNLSGYFDLIVGGDTFGEKKPSPTPVLKTLEI 151 (222)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEECSSC------------HHHHHHHHHHTTCGGGCSEEECTTSSCTTCCTTHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHCCCeEEEEcCCC------------HHHHHHHHHHcCCHHHheEEEecCcCCCCCCChHHHHHHHHH
Confidence 58999999999999999999999943 22455677888874 78888888888899999999999998
Q ss_pred hcCCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCccCc
Q psy4598 133 KNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFFTP 183 (369)
Q Consensus 133 ~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~~p 183 (369)
+ ++++++++||||+. +|+.+|+++|+.++..
T Consensus 152 ~----~~~~~~~~~vGD~~----------------~Di~~a~~aG~~~i~v 182 (222)
T 2nyv_A 152 L----GEEPEKALIVGDTD----------------ADIEAGKRAGTKTALA 182 (222)
T ss_dssp H----TCCGGGEEEEESSH----------------HHHHHHHHHTCEEEEE
T ss_pred h----CCCchhEEEECCCH----------------HHHHHHHHCCCeEEEE
Confidence 6 68999999999998 8999999999997644
No 20
>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}
Probab=99.60 E-value=1.1e-15 Score=134.44 Aligned_cols=97 Identities=10% Similarity=0.196 Sum_probs=85.3
Q ss_pred ccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHcCC--CeEEEEecCCCCCCCCchhHHHHHHHH
Q psy4598 55 LFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSLNV--PVQMFVATQYDRYRKPVPGMWEYLSQE 132 (369)
Q Consensus 55 ~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l~i--~~~~~~~~~~~~~rKP~~gm~~~~~~~ 132 (369)
++|++.+.|+.|++.|++++|+||.. ...+..+++.+|+ .|+.+++.+....+||+|.+++.++++
T Consensus 90 ~~~~~~~~l~~l~~~g~~~~i~s~~~------------~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~ 157 (214)
T 3e58_A 90 IFPDVLKVLNEVKSQGLEIGLASSSV------------KADIFRALEENRLQGFFDIVLSGEEFKESKPNPEIYLTALKQ 157 (214)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEESSC------------HHHHHHHHHHTTCGGGCSEEEEGGGCSSCTTSSHHHHHHHHH
T ss_pred cCchHHHHHHHHHHCCCCEEEEeCCc------------HHHHHHHHHHcCcHhheeeEeecccccCCCCChHHHHHHHHH
Confidence 68999999999999999999999943 2345667788888 478888888888999999999999999
Q ss_pred hcCCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCccCc
Q psy4598 133 KNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFFTP 183 (369)
Q Consensus 133 ~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~~p 183 (369)
+ ++++++++||||+. .|+.+|+++|+.++..
T Consensus 158 ~----~~~~~~~~~iGD~~----------------~Di~~a~~aG~~~~~~ 188 (214)
T 3e58_A 158 L----NVQASRALIIEDSE----------------KGIAAGVAADVEVWAI 188 (214)
T ss_dssp H----TCCGGGEEEEECSH----------------HHHHHHHHTTCEEEEE
T ss_pred c----CCChHHeEEEeccH----------------hhHHHHHHCCCEEEEE
Confidence 6 79999999999998 8999999999998643
No 21
>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}
Probab=99.59 E-value=2.4e-15 Score=128.98 Aligned_cols=117 Identities=15% Similarity=0.152 Sum_probs=90.8
Q ss_pred CceEEEEecCCceeecCCCCCCCCCccccccccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHc
Q psy4598 24 SAKIASFDLDGTLITTKSGKVFPVDTHDWKLLFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSL 103 (369)
Q Consensus 24 ~~k~~~fDlDgTLi~~~sg~~~~~~~~d~~~~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l 103 (369)
+.|+++||+||||+.... .+......+..+.|++.+.|++|+++|++++|+||.+. ..+..+++.+
T Consensus 8 ~~k~v~~DlDGTL~~~~~--~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~------------~~~~~~l~~~ 73 (162)
T 2p9j_A 8 KLKLLIMDIDGVLTDGKL--YYTEHGETIKVFNVLDGIGIKLLQKMGITLAVISGRDS------------APLITRLKEL 73 (162)
T ss_dssp HCCEEEECCTTTTSCSEE--EEETTEEEEEEEEHHHHHHHHHHHTTTCEEEEEESCCC------------HHHHHHHHHT
T ss_pred ceeEEEEecCcceECCce--eecCCCceeeeecccHHHHHHHHHHCCCEEEEEeCCCc------------HHHHHHHHHc
Confidence 468999999999996431 22333344555688999999999999999999999541 2355667888
Q ss_pred CCCeEEEEecCCCCCCCCchhHHHHHHHHhcCCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCcc
Q psy4598 104 NVPVQMFVATQYDRYRKPVPGMWEYLSQEKNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFF 181 (369)
Q Consensus 104 ~i~~~~~~~~~~~~~rKP~~gm~~~~~~~~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~ 181 (369)
|+.. ++. ..||+|.+++.+++++ ++++++++||||+. +|+.+|+++|+.++
T Consensus 74 gl~~--~~~-----~~kp~~~~~~~~~~~~----~~~~~~~~~vGD~~----------------~Di~~a~~ag~~~~ 124 (162)
T 2p9j_A 74 GVEE--IYT-----GSYKKLEIYEKIKEKY----SLKDEEIGFIGDDV----------------VDIEVMKKVGFPVA 124 (162)
T ss_dssp TCCE--EEE-----CC--CHHHHHHHHHHT----TCCGGGEEEEECSG----------------GGHHHHHHSSEEEE
T ss_pred CCHh--hcc-----CCCCCHHHHHHHHHHc----CCCHHHEEEECCCH----------------HHHHHHHHCCCeEE
Confidence 8742 222 2799999999999986 68999999999999 89999999999975
No 22
>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}
Probab=99.59 E-value=1.7e-15 Score=135.42 Aligned_cols=96 Identities=15% Similarity=0.197 Sum_probs=84.1
Q ss_pred ccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHcCCC--eEEEEecCCCCCCCCchhHHHHHHHH
Q psy4598 55 LFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSLNVP--VQMFVATQYDRYRKPVPGMWEYLSQE 132 (369)
Q Consensus 55 ~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l~i~--~~~~~~~~~~~~rKP~~gm~~~~~~~ 132 (369)
++|++.+.|+.|++.|++++|+||.+ ...+..+++.+|+. |+.+++.+....+||+|.+++.++++
T Consensus 97 ~~~~~~~~l~~l~~~g~~~~i~s~~~------------~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~ 164 (230)
T 3um9_A 97 PFADVPQALQQLRAAGLKTAILSNGS------------RHSIRQVVGNSGLTNSFDHLISVDEVRLFKPHQKVYELAMDT 164 (230)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEESSC------------HHHHHHHHHHHTCGGGCSEEEEGGGTTCCTTCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHhCCCeEEEEeCCC------------HHHHHHHHHHCCChhhcceeEehhhcccCCCChHHHHHHHHH
Confidence 58999999999999999999999953 23455667777874 78888888888999999999999999
Q ss_pred hcCCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCccC
Q psy4598 133 KNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFFT 182 (369)
Q Consensus 133 ~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~~ 182 (369)
+ ++++++++||||+. +|+.+|+++|+.++.
T Consensus 165 ~----~~~~~~~~~iGD~~----------------~Di~~a~~aG~~~~~ 194 (230)
T 3um9_A 165 L----HLGESEILFVSCNS----------------WDATGAKYFGYPVCW 194 (230)
T ss_dssp H----TCCGGGEEEEESCH----------------HHHHHHHHHTCCEEE
T ss_pred h----CCCcccEEEEeCCH----------------HHHHHHHHCCCEEEE
Confidence 6 79999999999998 899999999999864
No 23
>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A
Probab=99.58 E-value=9.6e-16 Score=138.12 Aligned_cols=96 Identities=16% Similarity=0.225 Sum_probs=84.0
Q ss_pred ccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHcCC--CeEEEEecCCCCCCCCchhHHHHHHHH
Q psy4598 55 LFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSLNV--PVQMFVATQYDRYRKPVPGMWEYLSQE 132 (369)
Q Consensus 55 ~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l~i--~~~~~~~~~~~~~rKP~~gm~~~~~~~ 132 (369)
++|++.+.|+.|++.|++++|+||.. ...+..+++.+|+ .|+.+++.+....+||+|.+++.++++
T Consensus 105 ~~~~~~~~l~~l~~~g~~~~i~s~~~------------~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~ 172 (237)
T 4ex6_A 105 LYPGVLEGLDRLSAAGFRLAMATSKV------------EKAARAIAELTGLDTRLTVIAGDDSVERGKPHPDMALHVARG 172 (237)
T ss_dssp BCTTHHHHHHHHHHTTEEEEEECSSC------------HHHHHHHHHHHTGGGTCSEEECTTTSSSCTTSSHHHHHHHHH
T ss_pred cCCCHHHHHHHHHhCCCcEEEEcCCC------------hHHHHHHHHHcCchhheeeEEeCCCCCCCCCCHHHHHHHHHH
Confidence 68999999999999999999999943 2345566777777 478888888888999999999999999
Q ss_pred hcCCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCccC
Q psy4598 133 KNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFFT 182 (369)
Q Consensus 133 ~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~~ 182 (369)
+ ++++++++||||+. .|+.+|.++|++++.
T Consensus 173 l----g~~~~~~i~vGD~~----------------~Di~~a~~aG~~~i~ 202 (237)
T 4ex6_A 173 L----GIPPERCVVIGDGV----------------PDAEMGRAAGMTVIG 202 (237)
T ss_dssp H----TCCGGGEEEEESSH----------------HHHHHHHHTTCEEEE
T ss_pred c----CCCHHHeEEEcCCH----------------HHHHHHHHCCCeEEE
Confidence 6 79999999999999 899999999998754
No 24
>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0
Probab=99.58 E-value=1.2e-15 Score=136.25 Aligned_cols=96 Identities=20% Similarity=0.316 Sum_probs=84.5
Q ss_pred ccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHcCCC--eEEEEecCCCCCCCCchhHHHHHHHH
Q psy4598 55 LFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSLNVP--VQMFVATQYDRYRKPVPGMWEYLSQE 132 (369)
Q Consensus 55 ~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l~i~--~~~~~~~~~~~~rKP~~gm~~~~~~~ 132 (369)
++|++.+.|+.|++.|++++|+||.. ...+..+++.+|+. |+.+++.+....+||+|.+++.++++
T Consensus 87 ~~~~~~~~l~~l~~~g~~~~i~t~~~------------~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~ 154 (226)
T 3mc1_A 87 VYDGIEALLSSLKDYGFHLVVATSKP------------TVFSKQILEHFKLAFYFDAIVGSSLDGKLSTKEDVIRYAMES 154 (226)
T ss_dssp BCTTHHHHHHHHHHHTCEEEEEEEEE------------HHHHHHHHHHTTCGGGCSEEEEECTTSSSCSHHHHHHHHHHH
T ss_pred cCcCHHHHHHHHHHCCCeEEEEeCCC------------HHHHHHHHHHhCCHhheeeeeccCCCCCCCCCHHHHHHHHHH
Confidence 68999999999999999999999932 23456678888884 78888888888999999999999999
Q ss_pred hcCCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCccC
Q psy4598 133 KNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFFT 182 (369)
Q Consensus 133 ~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~~ 182 (369)
+ ++++++++||||+. .|+.+|+++|+.++.
T Consensus 155 l----gi~~~~~i~iGD~~----------------~Di~~a~~aG~~~i~ 184 (226)
T 3mc1_A 155 L----NIKSDDAIMIGDRE----------------YDVIGALKNNLPSIG 184 (226)
T ss_dssp H----TCCGGGEEEEESSH----------------HHHHHHHTTTCCEEE
T ss_pred h----CcCcccEEEECCCH----------------HHHHHHHHCCCCEEE
Confidence 6 79999999999999 899999999998754
No 25
>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}
Probab=99.58 E-value=2e-15 Score=135.48 Aligned_cols=96 Identities=19% Similarity=0.199 Sum_probs=84.6
Q ss_pred ccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHcCCC--eEEEEecCCCCCCCCchhHHHHHHHH
Q psy4598 55 LFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSLNVP--VQMFVATQYDRYRKPVPGMWEYLSQE 132 (369)
Q Consensus 55 ~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l~i~--~~~~~~~~~~~~rKP~~gm~~~~~~~ 132 (369)
++|++.+.|+.|++.|++++|+||.+ ...+..+++.+|+. |+.+++.+....+||+|.++..++++
T Consensus 100 ~~~~~~~~l~~l~~~g~~~~i~t~~~------------~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~ 167 (233)
T 3umb_A 100 AFPENVPVLRQLREMGLPLGILSNGN------------PQMLEIAVKSAGMSGLFDHVLSVDAVRLYKTAPAAYALAPRA 167 (233)
T ss_dssp ECTTHHHHHHHHHTTTCCEEEEESSC------------HHHHHHHHHTTTCTTTCSEEEEGGGTTCCTTSHHHHTHHHHH
T ss_pred CCCCHHHHHHHHHhCCCcEEEEeCCC------------HHHHHHHHHHCCcHhhcCEEEEecccCCCCcCHHHHHHHHHH
Confidence 58999999999999999999999953 23456667888874 88888888888999999999999999
Q ss_pred hcCCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCccC
Q psy4598 133 KNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFFT 182 (369)
Q Consensus 133 ~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~~ 182 (369)
+ ++++++++||||+. .|+.+|.++|+.++.
T Consensus 168 ~----~~~~~~~~~vGD~~----------------~Di~~a~~~G~~~~~ 197 (233)
T 3umb_A 168 F----GVPAAQILFVSSNG----------------WDACGATWHGFTTFW 197 (233)
T ss_dssp H----TSCGGGEEEEESCH----------------HHHHHHHHHTCEEEE
T ss_pred h----CCCcccEEEEeCCH----------------HHHHHHHHcCCEEEE
Confidence 6 79999999999998 899999999999864
No 26
>1ly1_A Polynucleotide kinase; PNK, phosphatase, transferase; 2.00A {Enterobacteria phage T4} SCOP: c.37.1.1
Probab=99.58 E-value=9e-15 Score=127.02 Aligned_cols=99 Identities=22% Similarity=0.361 Sum_probs=84.4
Q ss_pred ccEEEEEEcCCCCcHHHHHHHHhc-cCCcEEEeCCcchh------------H---------HHHHHHHHHHH---hCCCc
Q psy4598 271 LDSVLIMIGSQGSGKSSFVSTYLK-PLNYTTVNRDTLGS------------W---------QKCVSVMKAAL---DSGLS 325 (369)
Q Consensus 271 ~~~lIll~G~pGSGKSTla~~L~~-~~~~~~i~~D~~~~------------~---------~~~~~~~~~~l---~~g~~ 325 (369)
||.+|+|+|+|||||||+++.|++ .+++.+|+.|.++. | +.+...+..++ ..|..
T Consensus 1 M~~~I~i~G~~GsGKST~a~~L~~~~~~~~~i~~d~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~ 80 (181)
T 1ly1_A 1 MKKIILTIGCPGSGKSTWAREFIAKNPGFYNINRDDYRQSIMAHEERDEYKYTKKKEGIVTGMQFDTAKSILYGGDSVKG 80 (181)
T ss_dssp CCEEEEEECCTTSSHHHHHHHHHHHSTTEEEECHHHHHHHHTTSCCGGGCCCCHHHHHHHHHHHHHHHHHHHTSCSSCCE
T ss_pred CCeEEEEecCCCCCHHHHHHHHHhhcCCcEEecHHHHHHHhhCCCccchhhhchhhhhHHHHHHHHHHHHHHhhccCCCe
Confidence 578999999999999999999999 78999999887631 1 11234566677 78999
Q ss_pred EEEeCCCCCHHHHHHHHHHHHhcCCeEEEEEEeCCHHHHHHHcC
Q psy4598 326 VVVDNTNPDKESRHRYIEAAKQHGVRCIAVHMNISKEHAKHNIK 369 (369)
Q Consensus 326 vIiD~tn~~~~~r~~~~~la~~~~~~v~~v~l~~~~e~~~~Rn~ 369 (369)
||+|+++.+...|..+.++++.+++++.+|++++|.+++.+|+.
T Consensus 81 vi~d~~~~~~~~~~~l~~~~~~~~~~~~~i~l~~~~~~~~~R~~ 124 (181)
T 1ly1_A 81 VIISDTNLNPERRLAWETFAKEYGWKVEHKVFDVPWTELVKRNS 124 (181)
T ss_dssp EEECSCCCSHHHHHHHHHHHHHHTCEEEEEECCCCHHHHHHHHT
T ss_pred EEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEEeCCHHHHHHHHh
Confidence 99999999999999999999999999999999999999999863
No 27
>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A
Probab=99.58 E-value=2.9e-15 Score=138.80 Aligned_cols=95 Identities=18% Similarity=0.255 Sum_probs=80.3
Q ss_pred ccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHcCCC--eEEEEecCCCCCCCCchhHHHHHHHH
Q psy4598 55 LFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSLNVP--VQMFVATQYDRYRKPVPGMWEYLSQE 132 (369)
Q Consensus 55 ~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l~i~--~~~~~~~~~~~~rKP~~gm~~~~~~~ 132 (369)
++||+.+.|+.|++ |++++|+||++ ...+..+++.+|+. |+.++++++...+||+|.+|+.++++
T Consensus 122 ~~~g~~~~L~~L~~-~~~l~i~Tn~~------------~~~~~~~l~~~gl~~~f~~i~~~~~~~~~KP~p~~~~~~~~~ 188 (260)
T 2gfh_A 122 LADDVKAMLTELRK-EVRLLLLTNGD------------RQTQREKIEACACQSYFDAIVIGGEQKEEKPAPSIFYHCCDL 188 (260)
T ss_dssp CCHHHHHHHHHHHT-TSEEEEEECSC------------HHHHHHHHHHHTCGGGCSEEEEGGGSSSCTTCHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHc-CCcEEEEECcC------------hHHHHHHHHhcCHHhhhheEEecCCCCCCCCCHHHHHHHHHH
Confidence 57999999999987 69999999954 12345567777874 88878888888999999999999998
Q ss_pred hcCCccccCCccEEeeCc-cccccccCCCCCCCCCcccHHHHHhCCC-CccC
Q psy4598 133 KNGDLAIDISQSFYAGDA-AGRAANWAPKKKKDFACTDHLFAFNLNL-AFFT 182 (369)
Q Consensus 133 ~~~~~~i~~~~s~~VGD~-~gr~~~~~~~~~~d~s~~D~~~A~n~Gi-~f~~ 182 (369)
+ ++++++|+||||+ . .|+++|+++|+ .++.
T Consensus 189 ~----~~~~~~~~~vGDs~~----------------~Di~~A~~aG~~~~i~ 220 (260)
T 2gfh_A 189 L----GVQPGDCVMVGDTLE----------------TDIQGGLNAGLKATVW 220 (260)
T ss_dssp H----TCCGGGEEEEESCTT----------------THHHHHHHTTCSEEEE
T ss_pred c----CCChhhEEEECCCch----------------hhHHHHHHCCCceEEE
Confidence 6 7899999999995 6 89999999999 6653
No 28
>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A
Probab=99.56 E-value=5.1e-15 Score=130.61 Aligned_cols=92 Identities=13% Similarity=0.194 Sum_probs=79.7
Q ss_pred ccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHcCCC--eEEEEecCCCCCCCCchhHHHHHHHH
Q psy4598 55 LFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSLNVP--VQMFVATQYDRYRKPVPGMWEYLSQE 132 (369)
Q Consensus 55 ~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l~i~--~~~~~~~~~~~~rKP~~gm~~~~~~~ 132 (369)
++|++.+ |+.|+++ ++++|+||.+ ...+..+++.+|+. |+.+++.+....+||+|.++..++++
T Consensus 75 ~~~~~~~-l~~l~~~-~~~~i~t~~~------------~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~ 140 (201)
T 2w43_A 75 AYEDTKY-LKEISEI-AEVYALSNGS------------INEVKQHLERNGLLRYFKGIFSAESVKEYKPSPKVYKYFLDS 140 (201)
T ss_dssp ECGGGGG-HHHHHHH-SEEEEEESSC------------HHHHHHHHHHTTCGGGCSEEEEGGGGTCCTTCHHHHHHHHHH
T ss_pred cCCChHH-HHHHHhC-CeEEEEeCcC------------HHHHHHHHHHCCcHHhCcEEEehhhcCCCCCCHHHHHHHHHh
Confidence 5899999 9999999 9999999953 23456677888884 78788888888999999999999998
Q ss_pred hcCCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCccC
Q psy4598 133 KNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFFT 182 (369)
Q Consensus 133 ~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~~ 182 (369)
+ + +++++||||+. .|+.+|+++|+.++.
T Consensus 141 ~----~--~~~~~~vGD~~----------------~Di~~a~~aG~~~~~ 168 (201)
T 2w43_A 141 I----G--AKEAFLVSSNA----------------FDVIGAKNAGMRSIF 168 (201)
T ss_dssp H----T--CSCCEEEESCH----------------HHHHHHHHTTCEEEE
T ss_pred c----C--CCcEEEEeCCH----------------HHhHHHHHCCCEEEE
Confidence 6 5 89999999999 899999999999864
No 29
>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}
Probab=99.56 E-value=2.5e-15 Score=134.45 Aligned_cols=97 Identities=21% Similarity=0.191 Sum_probs=84.4
Q ss_pred ccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHcCCC--eEEEEecCCCCCCCCchhHHHHHHHH
Q psy4598 55 LFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSLNVP--VQMFVATQYDRYRKPVPGMWEYLSQE 132 (369)
Q Consensus 55 ~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l~i~--~~~~~~~~~~~~rKP~~gm~~~~~~~ 132 (369)
++|++.+.|+.|++.|++++|+||.. ...+..+++.+|+. |+.+++.+....+||++.+++.++++
T Consensus 92 ~~~~~~~~l~~l~~~g~~~~i~s~~~------------~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~ 159 (233)
T 3s6j_A 92 ALPGAVELLETLDKENLKWCIATSGG------------IDTATINLKALKLDINKINIVTRDDVSYGKPDPDLFLAAAKK 159 (233)
T ss_dssp ECTTHHHHHHHHHHTTCCEEEECSSC------------HHHHHHHHHTTTCCTTSSCEECGGGSSCCTTSTHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHCCCeEEEEeCCc------------hhhHHHHHHhcchhhhhheeeccccCCCCCCChHHHHHHHHH
Confidence 58999999999999999999999943 23456667888874 78888888888999999999999999
Q ss_pred hcCCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCccCc
Q psy4598 133 KNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFFTP 183 (369)
Q Consensus 133 ~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~~p 183 (369)
+ ++++++++||||+. .|+.+|+++|++++..
T Consensus 160 l----~~~~~~~i~iGD~~----------------~Di~~a~~aG~~~i~v 190 (233)
T 3s6j_A 160 I----GAPIDECLVIGDAI----------------WDMLAARRCKATGVGL 190 (233)
T ss_dssp T----TCCGGGEEEEESSH----------------HHHHHHHHTTCEEEEE
T ss_pred h----CCCHHHEEEEeCCH----------------HhHHHHHHCCCEEEEE
Confidence 6 79999999999999 8999999999987543
No 30
>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}
Probab=99.55 E-value=2.4e-15 Score=135.16 Aligned_cols=94 Identities=16% Similarity=0.154 Sum_probs=74.5
Q ss_pred ccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHcCC--CeEEEEecCCCCCCCCchhHHHHHHHH
Q psy4598 55 LFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSLNV--PVQMFVATQYDRYRKPVPGMWEYLSQE 132 (369)
Q Consensus 55 ~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l~i--~~~~~~~~~~~~~rKP~~gm~~~~~~~ 132 (369)
++|++.+.|+.|++.|++++|+||.+ .+..+++.+|+ .|+.+++.+....+||+|.+++.++++
T Consensus 93 ~~~~~~~~l~~l~~~g~~~~i~t~~~--------------~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~ 158 (233)
T 3nas_A 93 LLPGIGRLLCQLKNENIKIGLASSSR--------------NAPKILRRLAIIDDFHAIVDPTTLAKGKPDPDIFLTAAAM 158 (233)
T ss_dssp SCTTHHHHHHHHHHTTCEEEECCSCT--------------THHHHHHHTTCTTTCSEECCC---------CCHHHHHHHH
T ss_pred cCcCHHHHHHHHHHCCCcEEEEcCch--------------hHHHHHHHcCcHhhcCEEeeHhhCCCCCCChHHHHHHHHH
Confidence 58999999999999999999999942 13456778887 478888888888999999999999999
Q ss_pred hcCCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCccC
Q psy4598 133 KNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFFT 182 (369)
Q Consensus 133 ~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~~ 182 (369)
+ ++++++++||||+. .|+.+|+++|+.++.
T Consensus 159 l----gi~~~~~i~vGDs~----------------~Di~~a~~aG~~~~~ 188 (233)
T 3nas_A 159 L----DVSPADCAAIEDAE----------------AGISAIKSAGMFAVG 188 (233)
T ss_dssp H----TSCGGGEEEEECSH----------------HHHHHHHHTTCEEEE
T ss_pred c----CCCHHHEEEEeCCH----------------HHHHHHHHcCCEEEE
Confidence 6 79999999999998 899999999999853
No 31
>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}
Probab=99.55 E-value=1.7e-15 Score=133.27 Aligned_cols=95 Identities=12% Similarity=0.133 Sum_probs=80.4
Q ss_pred ccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHcCCC--eEEEEecCCCCCCCCchhHHHHHHHH
Q psy4598 55 LFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSLNVP--VQMFVATQYDRYRKPVPGMWEYLSQE 132 (369)
Q Consensus 55 ~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l~i~--~~~~~~~~~~~~rKP~~gm~~~~~~~ 132 (369)
++|++.+.|+.|+++| +++|+||.+ ...+..+++.+|+. |+.+++.+....+||+|.+++.++++
T Consensus 87 ~~~~~~~~l~~l~~~g-~~~i~s~~~------------~~~~~~~l~~~~~~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~ 153 (200)
T 3cnh_A 87 PRPEVLALARDLGQRY-RMYSLNNEG------------RDLNEYRIRTFGLGEFLLAFFTSSALGVMKPNPAMYRLGLTL 153 (200)
T ss_dssp BCHHHHHHHHHHTTTS-EEEEEECCC------------HHHHHHHHHHHTGGGTCSCEEEHHHHSCCTTCHHHHHHHHHH
T ss_pred cCccHHHHHHHHHHcC-CEEEEeCCc------------HHHHHHHHHhCCHHHhcceEEeecccCCCCCCHHHHHHHHHH
Confidence 5799999999999999 999999953 22345556677763 77777777777899999999999998
Q ss_pred hcCCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCccC
Q psy4598 133 KNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFFT 182 (369)
Q Consensus 133 ~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~~ 182 (369)
+ ++++++++||||+. .|+.+|+++|+.++.
T Consensus 154 ~----~~~~~~~~~vgD~~----------------~Di~~a~~aG~~~~~ 183 (200)
T 3cnh_A 154 A----QVRPEEAVMVDDRL----------------QNVQAARAVGMHAVQ 183 (200)
T ss_dssp H----TCCGGGEEEEESCH----------------HHHHHHHHTTCEEEE
T ss_pred c----CCCHHHeEEeCCCH----------------HHHHHHHHCCCEEEE
Confidence 6 78999999999999 899999999999853
No 32
>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6
Probab=99.55 E-value=4.3e-15 Score=135.74 Aligned_cols=97 Identities=22% Similarity=0.340 Sum_probs=84.2
Q ss_pred ccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHcCCC--eEEEEecCCCCCCCCchhHHHHHHHH
Q psy4598 55 LFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSLNVP--VQMFVATQYDRYRKPVPGMWEYLSQE 132 (369)
Q Consensus 55 ~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l~i~--~~~~~~~~~~~~rKP~~gm~~~~~~~ 132 (369)
++|++.+.|+.|+++|++++|+||.. ...+..+++.+|+. |+.+++.+....+||+|.++..++++
T Consensus 115 ~~~~~~~~l~~l~~~g~~~~i~t~~~------------~~~~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~ 182 (243)
T 2hsz_A 115 LYPNVKETLEALKAQGYILAVVTNKP------------TKHVQPILTAFGIDHLFSEMLGGQSLPEIKPHPAPFYYLCGK 182 (243)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEECSSC------------HHHHHHHHHHTTCGGGCSEEECTTTSSSCTTSSHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHCCCEEEEEECCc------------HHHHHHHHHHcCchheEEEEEecccCCCCCcCHHHHHHHHHH
Confidence 46999999999999999999999953 22456677888874 78888888888899999999999998
Q ss_pred hcCCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCccCc
Q psy4598 133 KNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFFTP 183 (369)
Q Consensus 133 ~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~~p 183 (369)
+ ++++++++||||+. .|+.+|+++|+.++..
T Consensus 183 ~----~~~~~~~~~vGD~~----------------~Di~~a~~aG~~~i~v 213 (243)
T 2hsz_A 183 F----GLYPKQILFVGDSQ----------------NDIFAAHSAGCAVVGL 213 (243)
T ss_dssp H----TCCGGGEEEEESSH----------------HHHHHHHHHTCEEEEE
T ss_pred h----CcChhhEEEEcCCH----------------HHHHHHHHCCCeEEEE
Confidence 6 78999999999998 8999999999998643
No 33
>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}
Probab=99.55 E-value=3.1e-15 Score=135.36 Aligned_cols=96 Identities=16% Similarity=0.278 Sum_probs=84.5
Q ss_pred ccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHcCCC--eEEEEecCCCCCCCCchhHHHHHHHH
Q psy4598 55 LFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSLNVP--VQMFVATQYDRYRKPVPGMWEYLSQE 132 (369)
Q Consensus 55 ~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l~i~--~~~~~~~~~~~~rKP~~gm~~~~~~~ 132 (369)
++|++.+.|+.|++.|++++|+||.. ...+..+++.+|+. |+.+++.+....+||+|.+++.++++
T Consensus 111 ~~~~~~~~l~~l~~~g~~~~i~s~~~------------~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~ 178 (240)
T 3sd7_A 111 IYENMKEILEMLYKNGKILLVATSKP------------TVFAETILRYFDIDRYFKYIAGSNLDGTRVNKNEVIQYVLDL 178 (240)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEEEEE------------HHHHHHHHHHTTCGGGCSEEEEECTTSCCCCHHHHHHHHHHH
T ss_pred cCccHHHHHHHHHHCCCeEEEEeCCc------------HHHHHHHHHHcCcHhhEEEEEeccccCCCCCCHHHHHHHHHH
Confidence 68999999999999999999999932 23456677888884 78888888888999999999999999
Q ss_pred hcCCcccc-CCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCccC
Q psy4598 133 KNGDLAID-ISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFFT 182 (369)
Q Consensus 133 ~~~~~~i~-~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~~ 182 (369)
+ +++ +++++||||+. .|+.+|.++|++++.
T Consensus 179 ~----g~~~~~~~i~vGD~~----------------~Di~~a~~aG~~~i~ 209 (240)
T 3sd7_A 179 C----NVKDKDKVIMVGDRK----------------YDIIGAKKIGIDSIG 209 (240)
T ss_dssp H----TCCCGGGEEEEESSH----------------HHHHHHHHHTCEEEE
T ss_pred c----CCCCCCcEEEECCCH----------------HHHHHHHHCCCCEEE
Confidence 6 788 99999999999 899999999998754
No 34
>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A
Probab=99.55 E-value=7.5e-15 Score=134.52 Aligned_cols=94 Identities=12% Similarity=0.200 Sum_probs=81.3
Q ss_pred ccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHcCCC--eEEEEecCCCCCCCCchhHHHHHHHH
Q psy4598 55 LFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSLNVP--VQMFVATQYDRYRKPVPGMWEYLSQE 132 (369)
Q Consensus 55 ~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l~i~--~~~~~~~~~~~~rKP~~gm~~~~~~~ 132 (369)
++|++.+.|+.|+ |++++|+||.+ ...+..+++.+|+. |+.+++.+....+||+|.++..++++
T Consensus 94 ~~~~~~~~l~~l~--g~~~~i~t~~~------------~~~~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~ 159 (253)
T 1qq5_A 94 PYPDAAQCLAELA--PLKRAILSNGA------------PDMLQALVANAGLTDSFDAVISVDAKRVFKPHPDSYALVEEV 159 (253)
T ss_dssp BCTTHHHHHHHHT--TSEEEEEESSC------------HHHHHHHHHHTTCGGGCSEEEEGGGGTCCTTSHHHHHHHHHH
T ss_pred CCccHHHHHHHHc--CCCEEEEeCcC------------HHHHHHHHHHCCchhhccEEEEccccCCCCCCHHHHHHHHHH
Confidence 5799999999998 99999999953 22345667788874 78888888888999999999999998
Q ss_pred hcCCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCccC
Q psy4598 133 KNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFFT 182 (369)
Q Consensus 133 ~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~~ 182 (369)
+ ++++++++||||+. .|+.+|+++|+.++.
T Consensus 160 ~----~~~~~~~~~vGD~~----------------~Di~~a~~aG~~~~~ 189 (253)
T 1qq5_A 160 L----GVTPAEVLFVSSNG----------------FDVGGAKNFGFSVAR 189 (253)
T ss_dssp H----CCCGGGEEEEESCH----------------HHHHHHHHHTCEEEE
T ss_pred c----CCCHHHEEEEeCCh----------------hhHHHHHHCCCEEEE
Confidence 6 79999999999998 899999999999853
No 35
>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0
Probab=99.54 E-value=2.3e-14 Score=131.76 Aligned_cols=98 Identities=12% Similarity=0.048 Sum_probs=80.9
Q ss_pred cccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHc---CCCeEEEEecCCCCCCCCchhHHHHHH
Q psy4598 54 LLFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSL---NVPVQMFVATQYDRYRKPVPGMWEYLS 130 (369)
Q Consensus 54 ~~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l---~i~~~~~~~~~~~~~rKP~~gm~~~~~ 130 (369)
.++|++.+.|+.|++.|++++|+||.+ . ..+..+++.+ +..|+.+++.+....+||+|.+++.++
T Consensus 111 ~~~~~~~~~l~~l~~~g~~~~i~tn~~--------~----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~ 178 (277)
T 3iru_A 111 QLIPGWKEVFDKLIAQGIKVGGNTGYG--------P----GMMAPALIAAKEQGYTPASTVFATDVVRGRPFPDMALKVA 178 (277)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSC--------H----HHHHHHHHHHHHTTCCCSEEECGGGSSSCTTSSHHHHHHH
T ss_pred ccCcCHHHHHHHHHHcCCeEEEEeCCc--------h----HHHHHHHHhcCcccCCCceEecHHhcCCCCCCHHHHHHHH
Confidence 368999999999999999999999953 1 2223334433 333788888888889999999999999
Q ss_pred HHhcCCccccC-CccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCccCc
Q psy4598 131 QEKNGDLAIDI-SQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFFTP 183 (369)
Q Consensus 131 ~~~~~~~~i~~-~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~~p 183 (369)
+++ ++++ ++++||||+. .|+.+|+++|+.++..
T Consensus 179 ~~l----gi~~~~~~i~vGD~~----------------~Di~~a~~aG~~~v~v 212 (277)
T 3iru_A 179 LEL----EVGHVNGCIKVDDTL----------------PGIEEGLRAGMWTVGV 212 (277)
T ss_dssp HHH----TCSCGGGEEEEESSH----------------HHHHHHHHTTCEEEEE
T ss_pred HHc----CCCCCccEEEEcCCH----------------HHHHHHHHCCCeEEEE
Confidence 996 7999 9999999998 8999999999987543
No 36
>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}
Probab=99.54 E-value=7.2e-15 Score=135.82 Aligned_cols=96 Identities=16% Similarity=0.246 Sum_probs=82.9
Q ss_pred ccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHcCC--CeEEEEecCCCCCCCCchhHHHHHHHH
Q psy4598 55 LFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSLNV--PVQMFVATQYDRYRKPVPGMWEYLSQE 132 (369)
Q Consensus 55 ~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l~i--~~~~~~~~~~~~~rKP~~gm~~~~~~~ 132 (369)
++|++.+.|+.|++.|++++|+||... .+..+++.+|+ .|+.+++......+||+|.+|..++++
T Consensus 107 ~~~~~~~~l~~l~~~g~~~~i~tn~~~-------------~~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~ 173 (263)
T 3k1z_A 107 VLDGAEDTLRECRTRGLRLAVISNFDR-------------RLEGILGGLGLREHFDFVLTSEAAGWPKPDPRIFQEALRL 173 (263)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEESCCT-------------THHHHHHHTTCGGGCSCEEEHHHHSSCTTSHHHHHHHHHH
T ss_pred ECcCHHHHHHHHHhCCCcEEEEeCCcH-------------HHHHHHHhCCcHHhhhEEEeecccCCCCCCHHHHHHHHHH
Confidence 689999999999999999999999431 13566788888 478778887788999999999999999
Q ss_pred hcCCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCccC
Q psy4598 133 KNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFFT 182 (369)
Q Consensus 133 ~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~~ 182 (369)
+ ++++++++||||+.. .|+.+|+++|+.++.
T Consensus 174 ~----g~~~~~~~~vGD~~~---------------~Di~~a~~aG~~~i~ 204 (263)
T 3k1z_A 174 A----HMEPVVAAHVGDNYL---------------CDYQGPRAVGMHSFL 204 (263)
T ss_dssp H----TCCGGGEEEEESCHH---------------HHTHHHHTTTCEEEE
T ss_pred c----CCCHHHEEEECCCcH---------------HHHHHHHHCCCEEEE
Confidence 6 799999999999952 799999999999864
No 37
>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}
Probab=99.53 E-value=3.3e-15 Score=133.88 Aligned_cols=96 Identities=21% Similarity=0.245 Sum_probs=80.4
Q ss_pred ccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCCCCCCCCchhHHHHH---HH
Q psy4598 55 LFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSLNVPVQMFVATQYDRYRKPVPGMWEYL---SQ 131 (369)
Q Consensus 55 ~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l~i~~~~~~~~~~~~~rKP~~gm~~~~---~~ 131 (369)
++|++.+.|+.|++ |++++|+||.+ ...+...++.++-.|+.++++.+...+||+|.+|..+ ++
T Consensus 100 ~~~~~~~~l~~l~~-~~~~~i~tn~~------------~~~~~~~l~~l~~~fd~i~~~~~~~~~KP~~~~~~~~l~~~~ 166 (240)
T 3smv_A 100 AFPDTVEALQYLKK-HYKLVILSNID------------RNEFKLSNAKLGVEFDHIITAQDVGSYKPNPNNFTYMIDALA 166 (240)
T ss_dssp BCTTHHHHHHHHHH-HSEEEEEESSC------------HHHHHHHHTTTCSCCSEEEEHHHHTSCTTSHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHh-CCeEEEEeCCC------------hhHHHHHHHhcCCccCEEEEccccCCCCCCHHHHHHHHHHHH
Confidence 68999999999999 89999999953 1233444556777788888888888999999999999 66
Q ss_pred HhcCCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCccC
Q psy4598 132 EKNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFFT 182 (369)
Q Consensus 132 ~~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~~ 182 (369)
++ ++++++++||||+.. .|+.+|+++|+.++.
T Consensus 167 ~l----gi~~~~~~~vGD~~~---------------~Di~~a~~aG~~~~~ 198 (240)
T 3smv_A 167 KA----GIEKKDILHTAESLY---------------HDHIPANDAGLVSAW 198 (240)
T ss_dssp HT----TCCGGGEEEEESCTT---------------TTHHHHHHHTCEEEE
T ss_pred hc----CCCchhEEEECCCch---------------hhhHHHHHcCCeEEE
Confidence 64 799999999999942 799999999999864
No 38
>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6
Probab=99.53 E-value=4.9e-15 Score=131.22 Aligned_cols=95 Identities=21% Similarity=0.274 Sum_probs=82.8
Q ss_pred ccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHcCC--CeEEEEecCCCCCCCCchhHHHHHHHH
Q psy4598 55 LFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSLNV--PVQMFVATQYDRYRKPVPGMWEYLSQE 132 (369)
Q Consensus 55 ~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l~i--~~~~~~~~~~~~~rKP~~gm~~~~~~~ 132 (369)
++|++.+.|+.|+++ ++++|+||.+ ...+..+++.+|+ .|+.+++.+....+||+|.+++.++++
T Consensus 84 ~~~~~~~~l~~l~~~-~~~~i~s~~~------------~~~~~~~l~~~~l~~~f~~~~~~~~~~~~KP~~~~~~~~~~~ 150 (209)
T 2hdo_A 84 LYPGITSLFEQLPSE-LRLGIVTSQR------------RNELESGMRSYPFMMRMAVTISADDTPKRKPDPLPLLTALEK 150 (209)
T ss_dssp ECTTHHHHHHHSCTT-SEEEEECSSC------------HHHHHHHHTTSGGGGGEEEEECGGGSSCCTTSSHHHHHHHHH
T ss_pred cCCCHHHHHHHHHhc-CcEEEEeCCC------------HHHHHHHHHHcChHhhccEEEecCcCCCCCCCcHHHHHHHHH
Confidence 689999999999999 9999999953 2345566777777 488888888888999999999999998
Q ss_pred hcCCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCccC
Q psy4598 133 KNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFFT 182 (369)
Q Consensus 133 ~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~~ 182 (369)
+ ++++++++||||+. +|+.+|+++|+.++.
T Consensus 151 ~----~~~~~~~i~vGD~~----------------~Di~~a~~aG~~~~~ 180 (209)
T 2hdo_A 151 V----NVAPQNALFIGDSV----------------SDEQTAQAANVDFGL 180 (209)
T ss_dssp T----TCCGGGEEEEESSH----------------HHHHHHHHHTCEEEE
T ss_pred c----CCCcccEEEECCCh----------------hhHHHHHHcCCeEEE
Confidence 6 78999999999998 899999999999864
No 39
>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}
Probab=99.53 E-value=4.1e-15 Score=134.46 Aligned_cols=95 Identities=13% Similarity=0.165 Sum_probs=78.9
Q ss_pred ccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHcCC--Ce--EEEEecCCCCCCCCchhHHHHHH
Q psy4598 55 LFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSLNV--PV--QMFVATQYDRYRKPVPGMWEYLS 130 (369)
Q Consensus 55 ~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l~i--~~--~~~~~~~~~~~rKP~~gm~~~~~ 130 (369)
++|++.+.|+.|++.|++++|+||... . .+...++. ++ .| +.+++.+....+||+|.+++.++
T Consensus 109 ~~~~~~~~l~~l~~~g~~~~i~t~~~~--------~----~~~~~l~~-~l~~~f~~~~~~~~~~~~~~kp~~~~~~~~~ 175 (247)
T 3dv9_A 109 RMPGALEVLTKIKSEGLTPMVVTGSGQ--------T----SLLDRLNH-NFPGIFQANLMVTAFDVKYGKPNPEPYLMAL 175 (247)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECSCC---------------CHHHHHH-HSTTTCCGGGEECGGGCSSCTTSSHHHHHHH
T ss_pred CCCCHHHHHHHHHHcCCcEEEEcCCch--------H----HHHHHHHh-hHHHhcCCCeEEecccCCCCCCCCHHHHHHH
Confidence 579999999999999999999999531 1 12233444 44 47 77888888889999999999999
Q ss_pred HHhcCCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCccC
Q psy4598 131 QEKNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFFT 182 (369)
Q Consensus 131 ~~~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~~ 182 (369)
+++ ++++++++||||+. .|+.+|+++|+.++.
T Consensus 176 ~~l----g~~~~~~i~vGD~~----------------~Di~~a~~aG~~~i~ 207 (247)
T 3dv9_A 176 KKG----GFKPNEALVIENAP----------------LGVQAGVAAGIFTIA 207 (247)
T ss_dssp HHH----TCCGGGEEEEECSH----------------HHHHHHHHTTSEEEE
T ss_pred HHc----CCChhheEEEeCCH----------------HHHHHHHHCCCeEEE
Confidence 996 79999999999999 899999999998753
No 40
>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*
Probab=99.52 E-value=2.1e-15 Score=151.17 Aligned_cols=101 Identities=13% Similarity=0.201 Sum_probs=81.1
Q ss_pred ccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCCCCCCCCchhHHHHHHHHhc
Q psy4598 55 LFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSLNVPVQMFVATQYDRYRKPVPGMWEYLSQEKN 134 (369)
Q Consensus 55 ~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l~i~~~~~~~~~~~~~rKP~~gm~~~~~~~~~ 134 (369)
++|++.+.|+.|+++||+++|+||... ..... ...+...+..+.-+|+.++++++...+||+|.+|+.+++++
T Consensus 101 ~~~~~~~~L~~L~~~g~~~~i~Tn~~~--~~~~~----~~~~~~~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~l- 173 (555)
T 3i28_A 101 INRPMLQAALMLRKKGFTTAILTNTWL--DDRAE----RDGLAQLMCELKMHFDFLIESCQVGMVKPEPQIYKFLLDTL- 173 (555)
T ss_dssp ECHHHHHHHHHHHHTTCEEEEEECCCC--CCSTT----HHHHHHHHHHHHTTSSEEEEHHHHTCCTTCHHHHHHHHHHH-
T ss_pred cChhHHHHHHHHHHCCCEEEEEeCCCc--cccch----hhHHHHHhhhhhhheeEEEeccccCCCCCCHHHHHHHHHHc-
Confidence 679999999999999999999999410 01111 22233333344446888888888889999999999999996
Q ss_pred CCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCcc
Q psy4598 135 GDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFF 181 (369)
Q Consensus 135 ~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~ 181 (369)
++++++|+||||+. .|+++|+++|++++
T Consensus 174 ---g~~p~~~~~v~D~~----------------~di~~a~~aG~~~~ 201 (555)
T 3i28_A 174 ---KASPSEVVFLDDIG----------------ANLKPARDLGMVTI 201 (555)
T ss_dssp ---TCCGGGEEEEESCH----------------HHHHHHHHHTCEEE
T ss_pred ---CCChhHEEEECCcH----------------HHHHHHHHcCCEEE
Confidence 79999999999998 89999999999983
No 41
>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}
Probab=99.52 E-value=5.6e-15 Score=130.88 Aligned_cols=95 Identities=9% Similarity=0.147 Sum_probs=80.2
Q ss_pred ccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHH------cCCC--eEEEEecCCCCCCCCchhHH
Q psy4598 55 LFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKS------LNVP--VQMFVATQYDRYRKPVPGMW 126 (369)
Q Consensus 55 ~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~------l~i~--~~~~~~~~~~~~rKP~~gm~ 126 (369)
++|++.+.|+.|++ |++++|+||.+ ...+..+++. +|+. |+.+++.+....+||+|.++
T Consensus 90 ~~~~~~~~l~~l~~-g~~~~i~t~~~------------~~~~~~~~~~l~~~~~~~l~~~f~~~~~~~~~~~~Kp~~~~~ 156 (211)
T 2i6x_A 90 ISAEKFDYIDSLRP-DYRLFLLSNTN------------PYVLDLAMSPRFLPSGRTLDSFFDKVYASCQMGKYKPNEDIF 156 (211)
T ss_dssp ECHHHHHHHHHHTT-TSEEEEEECCC------------HHHHHHHTSTTSSTTCCCGGGGSSEEEEHHHHTCCTTSHHHH
T ss_pred cChHHHHHHHHHHc-CCeEEEEeCCC------------HHHHHHHHhhhccccccCHHHHcCeEEeecccCCCCCCHHHH
Confidence 57999999999998 99999999953 1234455555 5663 77777777778899999999
Q ss_pred HHHHHHhcCCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCccC
Q psy4598 127 EYLSQEKNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFFT 182 (369)
Q Consensus 127 ~~~~~~~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~~ 182 (369)
..+++++ ++++++++||||+. .|+.+|.++|+.++.
T Consensus 157 ~~~~~~~----~~~~~~~~~igD~~----------------~Di~~a~~aG~~~~~ 192 (211)
T 2i6x_A 157 LEMIADS----GMKPEETLFIDDGP----------------ANVATAERLGFHTYC 192 (211)
T ss_dssp HHHHHHH----CCCGGGEEEECSCH----------------HHHHHHHHTTCEEEC
T ss_pred HHHHHHh----CCChHHeEEeCCCH----------------HHHHHHHHcCCEEEE
Confidence 9999986 79999999999999 899999999999864
No 42
>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*
Probab=99.51 E-value=1.9e-14 Score=123.62 Aligned_cols=118 Identities=18% Similarity=0.189 Sum_probs=88.6
Q ss_pred CceEEEEecCCceeecCCCCCCCCCccccccccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHc
Q psy4598 24 SAKIASFDLDGTLITTKSGKVFPVDTHDWKLLFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSL 103 (369)
Q Consensus 24 ~~k~~~fDlDgTLi~~~sg~~~~~~~~d~~~~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l 103 (369)
+.|.++||+||||+... ..+......+..+...-...|+.|+++|++++|+||.+ ...+..+++.+
T Consensus 3 ~ik~vifD~DGTL~~~~--~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~------------~~~~~~~~~~~ 68 (164)
T 3e8m_A 3 EIKLILTDIDGVWTDGG--MFYDQTGNEWKKFNTSDSAGIFWAHNKGIPVGILTGEK------------TEIVRRRAEKL 68 (164)
T ss_dssp CCCEEEECSTTTTSSSE--EEECSSSCEEEEEEGGGHHHHHHHHHTTCCEEEECSSC------------CHHHHHHHHHT
T ss_pred cceEEEEcCCCceEcCc--EEEcCCCcEEEEecCChHHHHHHHHHCCCEEEEEeCCC------------hHHHHHHHHHc
Confidence 46899999999999743 12222333333333334458999999999999999954 13456677888
Q ss_pred CCCeEEEEecCCCCCCCCchhHHHHHHHHhcCCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCccC
Q psy4598 104 NVPVQMFVATQYDRYRKPVPGMWEYLSQEKNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFFT 182 (369)
Q Consensus 104 ~i~~~~~~~~~~~~~rKP~~gm~~~~~~~~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~~ 182 (369)
|+.- ++. ..||+|.++..+++++ ++++++++||||+. +|+.+|+++|+.+.-
T Consensus 69 gl~~--~~~-----~~kpk~~~~~~~~~~~----~~~~~~~~~vGD~~----------------~Di~~~~~ag~~~~~ 120 (164)
T 3e8m_A 69 KVDY--LFQ-----GVVDKLSAAEELCNEL----GINLEQVAYIGDDL----------------NDAKLLKRVGIAGVP 120 (164)
T ss_dssp TCSE--EEC-----SCSCHHHHHHHHHHHH----TCCGGGEEEECCSG----------------GGHHHHTTSSEEECC
T ss_pred CCCE--eec-----ccCChHHHHHHHHHHc----CCCHHHEEEECCCH----------------HHHHHHHHCCCeEEc
Confidence 8742 111 2599999999999996 78999999999999 899999999998753
No 43
>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0
Probab=99.51 E-value=4.9e-14 Score=125.11 Aligned_cols=95 Identities=16% Similarity=0.171 Sum_probs=78.5
Q ss_pred ccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHcCCC--eEEEEe----------cCCCCCCCCc
Q psy4598 55 LFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSLNVP--VQMFVA----------TQYDRYRKPV 122 (369)
Q Consensus 55 ~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l~i~--~~~~~~----------~~~~~~rKP~ 122 (369)
++|++.+.|+.|+++|++++|+||.. ...+..+++.+|+. |+.+++ +.....+||+
T Consensus 76 ~~~~~~~~l~~l~~~g~~~~i~S~~~------------~~~~~~~l~~~gl~~~f~~~~~~~~~~~~~~~~~~~~~~k~k 143 (217)
T 3m1y_A 76 LFEGALELVSALKEKNYKVVCFSGGF------------DLATNHYRDLLHLDAAFSNTLIVENDALNGLVTGHMMFSHSK 143 (217)
T ss_dssp BCBTHHHHHHHHHTTTEEEEEEEEEE------------HHHHHHHHHHHTCSEEEEEEEEEETTEEEEEEEESCCSTTHH
T ss_pred CCCCHHHHHHHHHHCCCEEEEEcCCc------------hhHHHHHHHHcCcchhccceeEEeCCEEEeeeccCCCCCCCh
Confidence 68999999999999999999999932 23455667788885 554442 2234578999
Q ss_pred hhHHHHHHHHhcCCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCcc
Q psy4598 123 PGMWEYLSQEKNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFF 181 (369)
Q Consensus 123 ~gm~~~~~~~~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~ 181 (369)
|.+++.+++++ ++++++++||||+. .|+.+|.++|+.+.
T Consensus 144 ~~~~~~~~~~~----g~~~~~~i~vGDs~----------------~Di~~a~~aG~~~~ 182 (217)
T 3m1y_A 144 GEMLLVLQRLL----NISKTNTLVVGDGA----------------NDLSMFKHAHIKIA 182 (217)
T ss_dssp HHHHHHHHHHH----TCCSTTEEEEECSG----------------GGHHHHTTCSEEEE
T ss_pred HHHHHHHHHHc----CCCHhHEEEEeCCH----------------HHHHHHHHCCCeEE
Confidence 99999999986 79999999999998 89999999999973
No 44
>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0
Probab=99.51 E-value=1.2e-14 Score=130.36 Aligned_cols=96 Identities=18% Similarity=0.235 Sum_probs=81.7
Q ss_pred ccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHcCC--CeEEEEecCCCCCCCCchhHHHHHHHH
Q psy4598 55 LFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSLNV--PVQMFVATQYDRYRKPVPGMWEYLSQE 132 (369)
Q Consensus 55 ~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l~i--~~~~~~~~~~~~~rKP~~gm~~~~~~~ 132 (369)
++|++.+.|+.|+ +|++++|+||.+ ...+...++.+|+ .|+.+++.+....+||+|.+++.++++
T Consensus 108 ~~~~~~~~l~~l~-~g~~~~i~sn~~------------~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~ 174 (240)
T 3qnm_A 108 LMPHAKEVLEYLA-PQYNLYILSNGF------------RELQSRKMRSAGVDRYFKKIILSEDLGVLKPRPEIFHFALSA 174 (240)
T ss_dssp BSTTHHHHHHHHT-TTSEEEEEECSC------------HHHHHHHHHHHTCGGGCSEEEEGGGTTCCTTSHHHHHHHHHH
T ss_pred cCccHHHHHHHHH-cCCeEEEEeCCc------------hHHHHHHHHHcChHhhceeEEEeccCCCCCCCHHHHHHHHHH
Confidence 5899999999999 999999999942 2234556677777 378888888888999999999999999
Q ss_pred hcCCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCccC
Q psy4598 133 KNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFFT 182 (369)
Q Consensus 133 ~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~~ 182 (369)
+ ++++++++||||+.. .|+.+|+++|+.++.
T Consensus 175 l----gi~~~~~~~iGD~~~---------------~Di~~a~~aG~~~~~ 205 (240)
T 3qnm_A 175 T----QSELRESLMIGDSWE---------------ADITGAHGVGMHQAF 205 (240)
T ss_dssp T----TCCGGGEEEEESCTT---------------TTHHHHHHTTCEEEE
T ss_pred c----CCCcccEEEECCCch---------------HhHHHHHHcCCeEEE
Confidence 6 799999999999941 799999999999854
No 45
>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A
Probab=99.51 E-value=1.3e-14 Score=130.22 Aligned_cols=96 Identities=14% Similarity=0.179 Sum_probs=82.5
Q ss_pred ccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHcCCC--eEEEEecCCCCCCCCchhHHHHHHHH
Q psy4598 55 LFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSLNVP--VQMFVATQYDRYRKPVPGMWEYLSQE 132 (369)
Q Consensus 55 ~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l~i~--~~~~~~~~~~~~rKP~~gm~~~~~~~ 132 (369)
++|++.+.|+.|++. ++++|+||.. ...+...++.+|+. |+.+++.+....+||+|.+++.++++
T Consensus 104 ~~~~~~~~l~~l~~~-~~~~i~t~~~------------~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~ 170 (238)
T 3ed5_A 104 LIDGAFDLISNLQQQ-FDLYIVTNGV------------SHTQYKRLRDSGLFPFFKDIFVSEDTGFQKPMKEYFNYVFER 170 (238)
T ss_dssp BCTTHHHHHHHHHTT-SEEEEEECSC------------HHHHHHHHHHTTCGGGCSEEEEGGGTTSCTTCHHHHHHHHHT
T ss_pred CCccHHHHHHHHHhc-CeEEEEeCCC------------HHHHHHHHHHcChHhhhheEEEecccCCCCCChHHHHHHHHH
Confidence 689999999999999 9999999953 23445667788874 78888888888999999999999998
Q ss_pred hcCCcc-ccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCccC
Q psy4598 133 KNGDLA-IDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFFT 182 (369)
Q Consensus 133 ~~~~~~-i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~~ 182 (369)
+ + +++++++||||+.. .|+.+|+++|+.++.
T Consensus 171 ~----g~~~~~~~i~vGD~~~---------------~Di~~a~~aG~~~i~ 202 (238)
T 3ed5_A 171 I----PQFSAEHTLIIGDSLT---------------ADIKGGQLAGLDTCW 202 (238)
T ss_dssp S----TTCCGGGEEEEESCTT---------------TTHHHHHHTTCEEEE
T ss_pred c----CCCChhHeEEECCCcH---------------HHHHHHHHCCCEEEE
Confidence 5 7 99999999999962 699999999998753
No 46
>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A
Probab=99.51 E-value=1.9e-14 Score=128.95 Aligned_cols=96 Identities=19% Similarity=0.333 Sum_probs=82.4
Q ss_pred ccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHcCCC--eEEEEecCCCCCCCCchhHHHHHHHH
Q psy4598 55 LFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSLNVP--VQMFVATQYDRYRKPVPGMWEYLSQE 132 (369)
Q Consensus 55 ~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l~i~--~~~~~~~~~~~~rKP~~gm~~~~~~~ 132 (369)
++|++.+.|+.|++. ++++|+||.+ ...+...++.+|+. |+.+++.+....+||+|.+++.++++
T Consensus 101 ~~~~~~~~l~~l~~~-~~~~i~t~~~------------~~~~~~~l~~~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~ 167 (234)
T 3u26_A 101 LYPEVVEVLKSLKGK-YHVGMITDSD------------TEQAMAFLDALGIKDLFDSITTSEEAGFFKPHPRIFELALKK 167 (234)
T ss_dssp BCTTHHHHHHHHTTT-SEEEEEESSC------------HHHHHHHHHHTTCGGGCSEEEEHHHHTBCTTSHHHHHHHHHH
T ss_pred cCcCHHHHHHHHHhC-CcEEEEECCC------------HHHHHHHHHHcCcHHHcceeEeccccCCCCcCHHHHHHHHHH
Confidence 689999999999999 9999999953 23455667888884 78888887778899999999999999
Q ss_pred hcCCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCccC
Q psy4598 133 KNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFFT 182 (369)
Q Consensus 133 ~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~~ 182 (369)
+ ++++++++||||+.. +|+.+|+++|+.++.
T Consensus 168 ~----~~~~~~~~~vGD~~~---------------~Di~~a~~aG~~~~~ 198 (234)
T 3u26_A 168 A----GVKGEEAVYVGDNPV---------------KDCGGSKNLGMTSIL 198 (234)
T ss_dssp H----TCCGGGEEEEESCTT---------------TTHHHHHTTTCEEEE
T ss_pred c----CCCchhEEEEcCCcH---------------HHHHHHHHcCCEEEE
Confidence 6 799999999999952 799999999998754
No 47
>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A
Probab=99.51 E-value=5.3e-15 Score=135.56 Aligned_cols=96 Identities=11% Similarity=0.177 Sum_probs=83.7
Q ss_pred ccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHcCCC--eEE-EEecCCCC-CCCCchhHHHHHH
Q psy4598 55 LFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSLNVP--VQM-FVATQYDR-YRKPVPGMWEYLS 130 (369)
Q Consensus 55 ~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l~i~--~~~-~~~~~~~~-~rKP~~gm~~~~~ 130 (369)
++|++.+.|+.|++.|++++|+||.. ...+..+++.+|+. |+. +++.+... .+||+|.+++.++
T Consensus 111 ~~~~~~~~l~~l~~~g~~~~i~s~~~------------~~~~~~~l~~~~l~~~f~~~i~~~~~~~~~~Kp~~~~~~~~~ 178 (259)
T 4eek_A 111 AIEGAAETLRALRAAGVPFAIGSNSE------------RGRLHLKLRVAGLTELAGEHIYDPSWVGGRGKPHPDLYTFAA 178 (259)
T ss_dssp ECTTHHHHHHHHHHHTCCEEEECSSC------------HHHHHHHHHHTTCHHHHCSCEECGGGGTTCCTTSSHHHHHHH
T ss_pred cCccHHHHHHHHHHCCCeEEEEeCCC------------HHHHHHHHHhcChHhhccceEEeHhhcCcCCCCChHHHHHHH
Confidence 58999999999999999999999953 23456677888884 776 78888888 9999999999999
Q ss_pred HHhcCCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCccC
Q psy4598 131 QEKNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFFT 182 (369)
Q Consensus 131 ~~~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~~ 182 (369)
+++ ++++++++||||+. .|+.+|+++|+.++.
T Consensus 179 ~~l----gi~~~~~i~iGD~~----------------~Di~~a~~aG~~~i~ 210 (259)
T 4eek_A 179 QQL----GILPERCVVIEDSV----------------TGGAAGLAAGATLWG 210 (259)
T ss_dssp HHT----TCCGGGEEEEESSH----------------HHHHHHHHHTCEEEE
T ss_pred HHc----CCCHHHEEEEcCCH----------------HHHHHHHHCCCEEEE
Confidence 996 79999999999999 899999999999753
No 48
>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A
Probab=99.51 E-value=6.3e-15 Score=132.86 Aligned_cols=98 Identities=15% Similarity=0.244 Sum_probs=80.3
Q ss_pred ccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHH---HHcCC--CeEEEEecCCCCCCCCchhHHHHH
Q psy4598 55 LFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKII---KSLNV--PVQMFVATQYDRYRKPVPGMWEYL 129 (369)
Q Consensus 55 ~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l---~~l~i--~~~~~~~~~~~~~rKP~~gm~~~~ 129 (369)
++|++.+.|+.|++. ++++|+||.+ ......+...+ +.+|+ .|+.++++.....+||+|.+|+.+
T Consensus 113 ~~~~~~~~l~~l~~~-~~~~i~Sn~~---------~~~~~~~~~~l~~~~~~~l~~~fd~i~~~~~~~~~KP~~~~~~~~ 182 (229)
T 4dcc_A 113 IPTYKLDLLLKLREK-YVVYLLSNTN---------DIHWKWVCKNAFPYRTFKVEDYFEKTYLSYEMKMAKPEPEIFKAV 182 (229)
T ss_dssp CCHHHHHHHHHHTTT-SEEEEEECCC---------HHHHHHHHHHTSCBTTBCHHHHCSEEEEHHHHTCCTTCHHHHHHH
T ss_pred ccHHHHHHHHHHHhc-CcEEEEECCC---------hHHHHHHHhhhhhhccCCHHHhCCEEEeecccCCCCCCHHHHHHH
Confidence 469999999999998 9999999953 12222222333 55666 377788888888999999999999
Q ss_pred HHHhcCCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCccC
Q psy4598 130 SQEKNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFFT 182 (369)
Q Consensus 130 ~~~~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~~ 182 (369)
++++ ++++++++||||+. .|+.+|+++|+.++.
T Consensus 183 ~~~~----g~~~~~~~~vGD~~----------------~Di~~a~~aG~~~i~ 215 (229)
T 4dcc_A 183 TEDA----GIDPKETFFIDDSE----------------INCKVAQELGISTYT 215 (229)
T ss_dssp HHHH----TCCGGGEEEECSCH----------------HHHHHHHHTTCEEEC
T ss_pred HHHc----CCCHHHeEEECCCH----------------HHHHHHHHcCCEEEE
Confidence 9996 79999999999999 899999999999864
No 49
>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A
Probab=99.51 E-value=9.3e-15 Score=132.61 Aligned_cols=95 Identities=12% Similarity=0.164 Sum_probs=79.6
Q ss_pred ccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHcCC--Ce--EEEEecCCCCCCCCchhHHHHHH
Q psy4598 55 LFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSLNV--PV--QMFVATQYDRYRKPVPGMWEYLS 130 (369)
Q Consensus 55 ~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l~i--~~--~~~~~~~~~~~rKP~~gm~~~~~ 130 (369)
++|++.+.|+.|++.|++++|+||... .. +...++. ++ .| +.+++.+....+||+|.+++.++
T Consensus 110 ~~~~~~~~l~~l~~~g~~~~i~t~~~~--------~~----~~~~l~~-~l~~~f~~d~i~~~~~~~~~kp~~~~~~~~~ 176 (243)
T 3qxg_A 110 RMPGAWELLQKVKSEGLTPMVVTGSGQ--------LS----LLERLEH-NFPGMFHKELMVTAFDVKYGKPNPEPYLMAL 176 (243)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECCCCC--------HH----HHTTHHH-HSTTTCCGGGEECTTTCSSCTTSSHHHHHHH
T ss_pred CCCCHHHHHHHHHHcCCcEEEEeCCcH--------HH----HHHHHHH-hHHHhcCcceEEeHHhCCCCCCChHHHHHHH
Confidence 579999999999999999999999531 12 2233343 44 47 77888888889999999999999
Q ss_pred HHhcCCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCccC
Q psy4598 131 QEKNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFFT 182 (369)
Q Consensus 131 ~~~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~~ 182 (369)
+++ ++++++++||||+. .|+.+|+++|+.++.
T Consensus 177 ~~l----g~~~~~~i~vGD~~----------------~Di~~a~~aG~~~i~ 208 (243)
T 3qxg_A 177 KKG----GLKADEAVVIENAP----------------LGVEAGHKAGIFTIA 208 (243)
T ss_dssp HHT----TCCGGGEEEEECSH----------------HHHHHHHHTTCEEEE
T ss_pred HHc----CCCHHHeEEEeCCH----------------HHHHHHHHCCCEEEE
Confidence 996 79999999999999 899999999998864
No 50
>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3
Probab=99.50 E-value=2.1e-14 Score=124.87 Aligned_cols=93 Identities=18% Similarity=0.285 Sum_probs=79.5
Q ss_pred ccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHcCCC--eEEEEecCCCCCCCCchhHHHHHHHH
Q psy4598 55 LFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSLNVP--VQMFVATQYDRYRKPVPGMWEYLSQE 132 (369)
Q Consensus 55 ~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l~i~--~~~~~~~~~~~~rKP~~gm~~~~~~~ 132 (369)
++|++.+.|+.|+++|++++|+||.+ . .+...++.+++. |+.+++.+....+||+|.+++.++++
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~t~~~---------~----~~~~~l~~~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~ 149 (190)
T 2fi1_A 83 LFEGVSDLLEDISNQGGRHFLVSHRN---------D----QVLEILEKTSIAAYFTEVVTSSSGFKRKPNPESMLYLREK 149 (190)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECSSC---------T----HHHHHHHHTTCGGGEEEEECGGGCCCCTTSCHHHHHHHHH
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCc---------H----HHHHHHHHcCCHhheeeeeeccccCCCCCCHHHHHHHHHH
Confidence 57999999999999999999999943 1 234556778873 88888888888999999999999998
Q ss_pred hcCCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCccC
Q psy4598 133 KNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFFT 182 (369)
Q Consensus 133 ~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~~ 182 (369)
+ +++ +++||||+. .|+.+|+++|+.++.
T Consensus 150 ~----~~~--~~~~iGD~~----------------~Di~~a~~aG~~~~~ 177 (190)
T 2fi1_A 150 Y----QIS--SGLVIGDRP----------------IDIEAGQAAGLDTHL 177 (190)
T ss_dssp T----TCS--SEEEEESSH----------------HHHHHHHHTTCEEEE
T ss_pred c----CCC--eEEEEcCCH----------------HHHHHHHHcCCeEEE
Confidence 6 576 999999998 899999999998753
No 51
>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}
Probab=99.50 E-value=7.3e-15 Score=133.88 Aligned_cols=97 Identities=13% Similarity=0.156 Sum_probs=77.3
Q ss_pred ccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHcCC--CeEEEEecC--CCCCCCCchhHHHHHH
Q psy4598 55 LFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSLNV--PVQMFVATQ--YDRYRKPVPGMWEYLS 130 (369)
Q Consensus 55 ~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l~i--~~~~~~~~~--~~~~rKP~~gm~~~~~ 130 (369)
++|++.+.|+.|++.|++++|+||.. ...+...+.. .+++ .|+.+++.+ ....+||+|.+++.++
T Consensus 113 ~~~~~~~~l~~l~~~g~~~~i~sn~~--------~~~~~~~l~~---~~~l~~~f~~~~~~~~~~~~~~Kp~~~~~~~~~ 181 (250)
T 3l5k_A 113 LMPGAEKLIIHLRKHGIPFALATSSR--------SASFDMKTSR---HKEFFSLFSHIVLGDDPEVQHGKPDPDIFLACA 181 (250)
T ss_dssp BCTTHHHHHHHHHHTTCCEEEECSCC--------HHHHHHHTTT---CHHHHTTSSCEECTTCTTCCSCTTSTHHHHHHH
T ss_pred CCCCHHHHHHHHHhCCCcEEEEeCCC--------HHHHHHHHHh---ccCHHhheeeEEecchhhccCCCCChHHHHHHH
Confidence 68999999999999999999999953 1222222211 1122 467777777 7789999999999999
Q ss_pred HHhcCCccccC--CccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCccC
Q psy4598 131 QEKNGDLAIDI--SQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFFT 182 (369)
Q Consensus 131 ~~~~~~~~i~~--~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~~ 182 (369)
+++ ++++ ++++||||+. .|+.+|+++|+.++.
T Consensus 182 ~~l----gi~~~~~~~i~iGD~~----------------~Di~~a~~aG~~~i~ 215 (250)
T 3l5k_A 182 KRF----SPPPAMEKCLVFEDAP----------------NGVEAALAAGMQVVM 215 (250)
T ss_dssp HTS----SSCCCGGGEEEEESSH----------------HHHHHHHHTTCEEEE
T ss_pred HHc----CCCCCcceEEEEeCCH----------------HHHHHHHHcCCEEEE
Confidence 986 6777 9999999999 899999999998854
No 52
>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*
Probab=99.48 E-value=6.4e-14 Score=122.74 Aligned_cols=117 Identities=15% Similarity=0.189 Sum_probs=91.2
Q ss_pred CceEEEEecCCceeecCCCCCCCCCccccccccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHc
Q psy4598 24 SAKIASFDLDGTLITTKSGKVFPVDTHDWKLLFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSL 103 (369)
Q Consensus 24 ~~k~~~fDlDgTLi~~~sg~~~~~~~~d~~~~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l 103 (369)
+.|+++||+||||+.... .+......+..+.+...++|++|+++|++++|+||.+. ..+..+++.+
T Consensus 7 ~ik~i~~DlDGTL~~~~~--~~~~~~~~~~~~~~~~~~~l~~L~~~G~~~~i~Tg~~~------------~~~~~~~~~l 72 (180)
T 1k1e_A 7 NIKFVITDVDGVLTDGQL--HYDANGEAIKSFHVRDGLGIKMLMDADIQVAVLSGRDS------------PILRRRIADL 72 (180)
T ss_dssp GCCEEEEECTTTTSCSEE--EEETTEEEEEEEEHHHHHHHHHHHHTTCEEEEEESCCC------------HHHHHHHHHH
T ss_pred CCeEEEEeCCCCcCCCCe--eeccCcceeeeeccchHHHHHHHHHCCCeEEEEeCCCc------------HHHHHHHHHc
Confidence 468999999999996431 22222233444678899999999999999999999542 2345667788
Q ss_pred CCCeEEEEecCCCCCCCCchhHHHHHHHHhcCCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCcc
Q psy4598 104 NVPVQMFVATQYDRYRKPVPGMWEYLSQEKNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFF 181 (369)
Q Consensus 104 ~i~~~~~~~~~~~~~rKP~~gm~~~~~~~~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~ 181 (369)
|+.- ++. ..||++.+++.+++++ ++++++++||||+. .|+.+|.++|+.+.
T Consensus 73 gl~~--~~~-----~~k~k~~~~~~~~~~~----~~~~~~~~~vGD~~----------------~Di~~~~~ag~~~~ 123 (180)
T 1k1e_A 73 GIKL--FFL-----GKLEKETACFDLMKQA----GVTAEQTAYIGDDS----------------VDLPAFAACGTSFA 123 (180)
T ss_dssp TCCE--EEE-----SCSCHHHHHHHHHHHH----TCCGGGEEEEECSG----------------GGHHHHHHSSEEEE
T ss_pred CCce--eec-----CCCCcHHHHHHHHHHc----CCCHHHEEEECCCH----------------HHHHHHHHcCCeEE
Confidence 8742 221 3599999999999986 68999999999999 89999999999975
No 53
>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2
Probab=99.48 E-value=2.3e-14 Score=126.22 Aligned_cols=99 Identities=15% Similarity=0.213 Sum_probs=76.7
Q ss_pred ccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCCCCCCCCchhHHHHHHHHhc
Q psy4598 55 LFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSLNVPVQMFVATQYDRYRKPVPGMWEYLSQEKN 134 (369)
Q Consensus 55 ~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l~i~~~~~~~~~~~~~rKP~~gm~~~~~~~~~ 134 (369)
++|++.+.|+.|+++|++++|+||.+......... ....+.. .|+.++++.....+||+|.++..+++++
T Consensus 92 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~-----~~~~l~~----~f~~~~~~~~~~~~Kp~~~~~~~~~~~~- 161 (206)
T 2b0c_A 92 LRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPE-----EYPEIRD----AADHIYLSQDLGMRKPEARIYQHVLQAE- 161 (206)
T ss_dssp ECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGG-----GCHHHHH----HCSEEEEHHHHTCCTTCHHHHHHHHHHH-
T ss_pred cCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHH-----hccChhh----heeeEEEecccCCCCCCHHHHHHHHHHc-
Confidence 68999999999999999999999965432211100 0001111 2566677777778999999999999986
Q ss_pred CCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCccC
Q psy4598 135 GDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFFT 182 (369)
Q Consensus 135 ~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~~ 182 (369)
++++++++||||+. .|+.+|.++|+.++.
T Consensus 162 ---~~~~~~~~~vgD~~----------------~Di~~a~~aG~~~~~ 190 (206)
T 2b0c_A 162 ---GFSPSDTVFFDDNA----------------DNIEGANQLGITSIL 190 (206)
T ss_dssp ---TCCGGGEEEEESCH----------------HHHHHHHTTTCEEEE
T ss_pred ---CCCHHHeEEeCCCH----------------HHHHHHHHcCCeEEE
Confidence 78999999999999 899999999999853
No 54
>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*
Probab=99.48 E-value=7.1e-14 Score=130.03 Aligned_cols=93 Identities=17% Similarity=0.244 Sum_probs=78.5
Q ss_pred ccccHHHHHHHHHHCCc--EEEEEecCCCcCCCCCCHHHHHHHHHHHHHHcCC--CeEEEEecCCC----CCCCCchhHH
Q psy4598 55 LFSNIESVLKQYLDDGY--KLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSLNV--PVQMFVATQYD----RYRKPVPGMW 126 (369)
Q Consensus 55 ~~p~v~~~L~~L~~~G~--~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l~i--~~~~~~~~~~~----~~rKP~~gm~ 126 (369)
++|++.+.|+.|++.|+ +++|+||.. ...+..+++.+|+ .|+.+++++.. ..+||+|.++
T Consensus 143 ~~p~~~~~L~~L~~~g~~~~l~i~Tn~~------------~~~~~~~l~~~gl~~~fd~v~~~~~~~~~~~~~Kp~~~~~ 210 (282)
T 3nuq_A 143 PDIPLRNMLLRLRQSGKIDKLWLFTNAY------------KNHAIRCLRLLGIADLFDGLTYCDYSRTDTLVCKPHVKAF 210 (282)
T ss_dssp CCHHHHHHHHHHHHSSSCSEEEEECSSC------------HHHHHHHHHHHTCTTSCSEEECCCCSSCSSCCCTTSHHHH
T ss_pred cChhHHHHHHHHHhCCCCceEEEEECCC------------hHHHHHHHHhCCcccccceEEEeccCCCcccCCCcCHHHH
Confidence 58999999999999999 999999943 2344566677777 47777766433 5679999999
Q ss_pred HHHHHHhcCCccccC-CccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCC
Q psy4598 127 EYLSQEKNGDLAIDI-SQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLA 179 (369)
Q Consensus 127 ~~~~~~~~~~~~i~~-~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~ 179 (369)
+.+++++ ++++ ++++||||+. .|+.+|+++|+.
T Consensus 211 ~~~~~~l----gi~~~~~~i~vGD~~----------------~Di~~a~~aG~~ 244 (282)
T 3nuq_A 211 EKAMKES----GLARYENAYFIDDSG----------------KNIETGIKLGMK 244 (282)
T ss_dssp HHHHHHH----TCCCGGGEEEEESCH----------------HHHHHHHHHTCS
T ss_pred HHHHHHc----CCCCcccEEEEcCCH----------------HHHHHHHHCCCe
Confidence 9999996 7998 9999999999 899999999994
No 55
>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}
Probab=99.48 E-value=1.3e-13 Score=120.61 Aligned_cols=114 Identities=12% Similarity=0.199 Sum_probs=86.0
Q ss_pred CceEEEEecCCceeecCCCCCCCCCccccccc--cccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHH
Q psy4598 24 SAKIASFDLDGTLITTKSGKVFPVDTHDWKLL--FSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIK 101 (369)
Q Consensus 24 ~~k~~~fDlDgTLi~~~sg~~~~~~~~d~~~~--~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~ 101 (369)
..|.++||+||||++.. ..+.........+ .+++ .|++|+++|++++|+||.. ...+..+++
T Consensus 11 ~~k~vifD~DGTL~d~~--~~~~~~~~~~~~~~~~~~~--~l~~L~~~g~~~~i~T~~~------------~~~~~~~~~ 74 (176)
T 3mmz_A 11 DIDAVVLDFDGTQTDDR--VLIDSDGREFVSVHRGDGL--GIAALRKSGLTMLILSTEQ------------NPVVAARAR 74 (176)
T ss_dssp GCSEEEECCTTTTSCSC--CEECTTCCEEEEEEHHHHH--HHHHHHHTTCEEEEEESSC------------CHHHHHHHH
T ss_pred cCCEEEEeCCCCcCcCC--EeecCCccHhHhcccccHH--HHHHHHHCCCeEEEEECcC------------hHHHHHHHH
Confidence 45899999999999732 2222222222211 2222 7999999999999999953 234567788
Q ss_pred HcCCCeEEEEecCCCCCCCCchhHHHHHHHHhcCCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCcc
Q psy4598 102 SLNVPVQMFVATQYDRYRKPVPGMWEYLSQEKNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFF 181 (369)
Q Consensus 102 ~l~i~~~~~~~~~~~~~rKP~~gm~~~~~~~~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~ 181 (369)
.+|+. +++. .||++.+++.+++++ ++++++++||||+. .|+.+|.++|+.+.
T Consensus 75 ~lgi~---~~~~-----~~~k~~~l~~~~~~~----~~~~~~~~~vGD~~----------------nD~~~~~~ag~~v~ 126 (176)
T 3mmz_A 75 KLKIP---VLHG-----IDRKDLALKQWCEEQ----GIAPERVLYVGNDV----------------NDLPCFALVGWPVA 126 (176)
T ss_dssp HHTCC---EEES-----CSCHHHHHHHHHHHH----TCCGGGEEEEECSG----------------GGHHHHHHSSEEEE
T ss_pred HcCCe---eEeC-----CCChHHHHHHHHHHc----CCCHHHEEEEcCCH----------------HHHHHHHHCCCeEE
Confidence 88987 3332 399999999999986 78999999999999 89999999999874
No 56
>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}
Probab=99.46 E-value=1.5e-14 Score=129.82 Aligned_cols=93 Identities=15% Similarity=0.250 Sum_probs=69.8
Q ss_pred ccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHcCCC--eEEEEecCCCCCCCCchhHHHHHHHH
Q psy4598 55 LFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSLNVP--VQMFVATQYDRYRKPVPGMWEYLSQE 132 (369)
Q Consensus 55 ~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l~i~--~~~~~~~~~~~~rKP~~gm~~~~~~~ 132 (369)
++|++.+.|+.|+++|++++|+||.+ . .+..+++.+|+. |+.+++++....+||+|.+|+.++++
T Consensus 96 ~~~~~~~~l~~l~~~g~~~~i~Tn~~---------~----~~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~ 162 (220)
T 2zg6_A 96 LYDDTLEFLEGLKSNGYKLALVSNAS---------P----RVKTLLEKFDLKKYFDALALSYEIKAVKPNPKIFGFALAK 162 (220)
T ss_dssp ECTTHHHHHHHHHTTTCEEEECCSCH---------H----HHHHHHHHHTCGGGCSEEC-----------CCHHHHHHHH
T ss_pred ECcCHHHHHHHHHHCCCEEEEEeCCc---------H----HHHHHHHhcCcHhHeeEEEeccccCCCCCCHHHHHHHHHH
Confidence 57999999999999999999999942 1 245667888884 88888888888999999999999998
Q ss_pred hcCCccccCCccEEeeCccccccccCCCCCCCCCcc-cHHHHHhCCCCccCc
Q psy4598 133 KNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACT-DHLFAFNLNLAFFTP 183 (369)
Q Consensus 133 ~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~-D~~~A~n~Gi~f~~p 183 (369)
+ ++++ +||||+. . |+.+|+++|++++..
T Consensus 163 ~----~~~~---~~vgD~~----------------~~Di~~a~~aG~~~i~v 191 (220)
T 2zg6_A 163 V----GYPA---VHVGDIY----------------ELDYIGAKRSYVDPILL 191 (220)
T ss_dssp H----CSSE---EEEESSC----------------CCCCCCSSSCSEEEEEB
T ss_pred c----CCCe---EEEcCCc----------------hHhHHHHHHCCCeEEEE
Confidence 6 5766 9999999 6 999999999998644
No 57
>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}
Probab=99.46 E-value=4.3e-14 Score=135.39 Aligned_cols=95 Identities=14% Similarity=0.066 Sum_probs=78.4
Q ss_pred ccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHcCCC--eEEEEe----------cCCCCCCCCc
Q psy4598 55 LFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSLNVP--VQMFVA----------TQYDRYRKPV 122 (369)
Q Consensus 55 ~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l~i~--~~~~~~----------~~~~~~rKP~ 122 (369)
++||+.+.|+.|+++|++++|+||.. ...+..+++.+|+. |...+. ......+||+
T Consensus 180 l~pg~~e~L~~Lk~~G~~v~IvSn~~------------~~~~~~~l~~lgl~~~f~~~l~~~dg~~tg~i~~~~~~~kpk 247 (317)
T 4eze_A 180 LSPGLLTILPVIKAKGFKTAIISGGL------------DIFTQRLKARYQLDYAFSNTVEIRDNVLTDNITLPIMNAANK 247 (317)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEEEE------------HHHHHHHHHHHTCSEEEEECEEEETTEEEEEECSSCCCHHHH
T ss_pred ECcCHHHHHHHHHhCCCEEEEEeCcc------------HHHHHHHHHHcCCCeEEEEEEEeeCCeeeeeEecccCCCCCC
Confidence 68999999999999999999999932 34566778888884 443322 2234467999
Q ss_pred hhHHHHHHHHhcCCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCcc
Q psy4598 123 PGMWEYLSQEKNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFF 181 (369)
Q Consensus 123 ~gm~~~~~~~~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~ 181 (369)
|.++..+++++ ++++++++||||+. +|+.+|+++|+.+.
T Consensus 248 p~~~~~~~~~l----gv~~~~~i~VGDs~----------------~Di~aa~~AG~~va 286 (317)
T 4eze_A 248 KQTLVDLAARL----NIATENIIACGDGA----------------NDLPMLEHAGTGIA 286 (317)
T ss_dssp HHHHHHHHHHH----TCCGGGEEEEECSG----------------GGHHHHHHSSEEEE
T ss_pred HHHHHHHHHHc----CCCcceEEEEeCCH----------------HHHHHHHHCCCeEE
Confidence 99999999986 78999999999999 89999999999874
No 58
>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}
Probab=99.46 E-value=1.6e-13 Score=122.38 Aligned_cols=117 Identities=18% Similarity=0.200 Sum_probs=91.9
Q ss_pred CceEEEEecCCceeecCCCCCCCCCccccccccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHc
Q psy4598 24 SAKIASFDLDGTLITTKSGKVFPVDTHDWKLLFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSL 103 (369)
Q Consensus 24 ~~k~~~fDlDgTLi~~~sg~~~~~~~~d~~~~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l 103 (369)
..|.++||+||||+.+. ..+......+..+.+.....|+.|+++|++++|+||++ ...+..+++.+
T Consensus 24 ~ik~vifD~DGtL~d~~--~~~~~~~~~~~~~~~~d~~~l~~L~~~G~~~~ivT~~~------------~~~~~~~l~~l 89 (195)
T 3n07_A 24 QIKLLICDVDGVFSDGL--IYMGNQGEELKTFHTRDGYGVKALMNAGIEIAIITGRR------------SQIVENRMKAL 89 (195)
T ss_dssp TCCEEEECSTTTTSCSC--CEECTTSCEECCCCTTHHHHHHHHHHTTCEEEEECSSC------------CHHHHHHHHHT
T ss_pred CCCEEEEcCCCCcCCCc--EEEccCchhhheeecccHHHHHHHHHCCCEEEEEECcC------------HHHHHHHHHHc
Confidence 36899999999999753 12333334555556666778999999999999999964 23456778899
Q ss_pred CCCeEEEEecCCCCCCCCchhHHHHHHHHhcCCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCcc
Q psy4598 104 NVPVQMFVATQYDRYRKPVPGMWEYLSQEKNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFF 181 (369)
Q Consensus 104 ~i~~~~~~~~~~~~~rKP~~gm~~~~~~~~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~ 181 (369)
|+.. ++. ..||++.++..+++++ ++++++++||||+. .|+.++.++|+.+.
T Consensus 90 gi~~--~~~-----~~k~k~~~~~~~~~~~----~~~~~~~~~vGD~~----------------nDi~~~~~ag~~va 140 (195)
T 3n07_A 90 GISL--IYQ-----GQDDKVQAYYDICQKL----AIAPEQTGYIGDDL----------------IDWPVMEKVALRVC 140 (195)
T ss_dssp TCCE--EEC-----SCSSHHHHHHHHHHHH----CCCGGGEEEEESSG----------------GGHHHHTTSSEEEE
T ss_pred CCcE--Eee-----CCCCcHHHHHHHHHHh----CCCHHHEEEEcCCH----------------HHHHHHHHCCCEEE
Confidence 9752 221 3499999999999986 79999999999999 89999999999874
No 59
>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}
Probab=99.46 E-value=2.4e-14 Score=129.47 Aligned_cols=95 Identities=16% Similarity=0.160 Sum_probs=82.1
Q ss_pred ccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCCCCCCCCchhHHHHHHHHhc
Q psy4598 55 LFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSLNVPVQMFVATQYDRYRKPVPGMWEYLSQEKN 134 (369)
Q Consensus 55 ~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l~i~~~~~~~~~~~~~rKP~~gm~~~~~~~~~ 134 (369)
++|++.+.|+.|++. ++++|+||.+ ...+..+++.+|+.|+.+++.+....+||+|.+|+.+++++
T Consensus 117 ~~~~~~~~l~~l~~~-~~~~i~t~~~------------~~~~~~~l~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~l- 182 (254)
T 3umg_A 117 PWPDSVPGLTAIKAE-YIIGPLSNGN------------TSLLLDMAKNAGIPWDVIIGSDINRKYKPDPQAYLRTAQVL- 182 (254)
T ss_dssp BCTTHHHHHHHHHHH-SEEEECSSSC------------HHHHHHHHHHHTCCCSCCCCHHHHTCCTTSHHHHHHHHHHT-
T ss_pred CCcCHHHHHHHHHhC-CeEEEEeCCC------------HHHHHHHHHhCCCCeeEEEEcCcCCCCCCCHHHHHHHHHHc-
Confidence 589999999999997 9999999943 23455667788888877777777788999999999999996
Q ss_pred CCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCccC
Q psy4598 135 GDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFFT 182 (369)
Q Consensus 135 ~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~~ 182 (369)
++++++++||||+. .|+.+|+++|+.++.
T Consensus 183 ---gi~~~~~~~iGD~~----------------~Di~~a~~aG~~~~~ 211 (254)
T 3umg_A 183 ---GLHPGEVMLAAAHN----------------GDLEAAHATGLATAF 211 (254)
T ss_dssp ---TCCGGGEEEEESCH----------------HHHHHHHHTTCEEEE
T ss_pred ---CCChHHEEEEeCCh----------------HhHHHHHHCCCEEEE
Confidence 79999999999998 899999999999853
No 60
>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A
Probab=99.45 E-value=2.6e-13 Score=128.08 Aligned_cols=98 Identities=22% Similarity=0.337 Sum_probs=83.4
Q ss_pred ccEEEEEEcCCCCcHHHHHHHHhccC-CcEEEeCCcchhH---------------------HHHHHHHHHHH---hCCCc
Q psy4598 271 LDSVLIMIGSQGSGKSSFVSTYLKPL-NYTTVNRDTLGSW---------------------QKCVSVMKAAL---DSGLS 325 (369)
Q Consensus 271 ~~~lIll~G~pGSGKSTla~~L~~~~-~~~~i~~D~~~~~---------------------~~~~~~~~~~l---~~g~~ 325 (369)
||.+|+|+|+|||||||+++.|++.+ ++.+|+.|.++.. +.+...+..++ +.|..
T Consensus 1 M~~~I~l~G~~GsGKST~a~~L~~~~~~~~~i~~D~~r~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~ 80 (301)
T 1ltq_A 1 MKKIILTIGCPGSGKSTWAREFIAKNPGFYNINRDDYRQSIMAHEERDEYKYTKKKEGIVTGMQFDTAKSILYGGDSVKG 80 (301)
T ss_dssp CCEEEEEECCTTSSHHHHHHHHHHHSTTEEEECHHHHHHHHTTSCCCC---CCHHHHHHHHHHHHHHHHHHTTSCTTCCE
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHhCCCcEEecccHHHHHhccCCcccccccchhhhhHHHHHHHHHHHHHHhhccCCCE
Confidence 56899999999999999999999974 8999998865310 11234556677 78889
Q ss_pred EEEeCCCCCHHHHHHHHHHHHhcCCeEEEEEEeCCHHHHHHHc
Q psy4598 326 VVVDNTNPDKESRHRYIEAAKQHGVRCIAVHMNISKEHAKHNI 368 (369)
Q Consensus 326 vIiD~tn~~~~~r~~~~~la~~~~~~v~~v~l~~~~e~~~~Rn 368 (369)
||+|+++.+...|..+.++++..++++.+|++++|.+++.+|.
T Consensus 81 vi~d~~~~~~~~~~~l~~~~~~~~~~~~~i~l~~~~e~~~~R~ 123 (301)
T 1ltq_A 81 VIISDTNLNPERRLAWETFAKEYGWKVEHKVFDVPWTELVKRN 123 (301)
T ss_dssp EEECSCCCCHHHHHHHHHHHHHTTCEEEEEECCCCHHHHHHHH
T ss_pred EEEeCCCCCHHHHHHHHHHHHHcCCcEEEEEEECCHHHHHHHH
Confidence 9999999999999999999999999999999999999999985
No 61
>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}
Probab=99.45 E-value=3.4e-14 Score=129.08 Aligned_cols=95 Identities=15% Similarity=0.124 Sum_probs=82.2
Q ss_pred ccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCCCCCCCCchhHHHHHHHHhc
Q psy4598 55 LFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSLNVPVQMFVATQYDRYRKPVPGMWEYLSQEKN 134 (369)
Q Consensus 55 ~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l~i~~~~~~~~~~~~~rKP~~gm~~~~~~~~~ 134 (369)
++|++.+.|+.|++. ++++|+||.. ...+..+++.+|+.|+.+++.+....+||+|.+|+.+++++
T Consensus 121 ~~~~~~~~l~~l~~~-~~~~i~s~~~------------~~~~~~~l~~~g~~f~~~~~~~~~~~~kp~~~~~~~~~~~l- 186 (254)
T 3umc_A 121 PWPDTLAGMHALKAD-YWLAALSNGN------------TALMLDVARHAGLPWDMLLCADLFGHYKPDPQVYLGACRLL- 186 (254)
T ss_dssp ECTTHHHHHHHHTTT-SEEEECCSSC------------HHHHHHHHHHHTCCCSEECCHHHHTCCTTSHHHHHHHHHHH-
T ss_pred CCccHHHHHHHHHhc-CeEEEEeCCC------------HHHHHHHHHHcCCCcceEEeecccccCCCCHHHHHHHHHHc-
Confidence 479999999999885 9999999943 23455667888888888888877789999999999999996
Q ss_pred CCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCccC
Q psy4598 135 GDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFFT 182 (369)
Q Consensus 135 ~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~~ 182 (369)
++++++++||||+. .|+.+|+++|+.++.
T Consensus 187 ---gi~~~~~~~iGD~~----------------~Di~~a~~aG~~~~~ 215 (254)
T 3umc_A 187 ---DLPPQEVMLCAAHN----------------YDLKAARALGLKTAF 215 (254)
T ss_dssp ---TCCGGGEEEEESCH----------------HHHHHHHHTTCEEEE
T ss_pred ---CCChHHEEEEcCch----------------HhHHHHHHCCCeEEE
Confidence 79999999999998 899999999999853
No 62
>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}
Probab=99.45 E-value=7.3e-14 Score=124.95 Aligned_cols=92 Identities=17% Similarity=0.214 Sum_probs=78.9
Q ss_pred ccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHcCCC--eEEEEecCCCCCCCCchhHHHHHHHH
Q psy4598 55 LFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSLNVP--VQMFVATQYDRYRKPVPGMWEYLSQE 132 (369)
Q Consensus 55 ~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l~i~--~~~~~~~~~~~~rKP~~gm~~~~~~~ 132 (369)
++|++.+.|+.|++. ++++|+||.+.. ++.+|+. |+.+++.+....+||+|.+++.++++
T Consensus 106 ~~~~~~~~l~~l~~~-~~~~i~t~~~~~-----------------l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~ 167 (230)
T 3vay_A 106 IFPEVQPTLEILAKT-FTLGVITNGNAD-----------------VRRLGLADYFAFALCAEDLGIGKPDPAPFLEALRR 167 (230)
T ss_dssp BCTTHHHHHHHHHTT-SEEEEEESSCCC-----------------GGGSTTGGGCSEEEEHHHHTCCTTSHHHHHHHHHH
T ss_pred cCcCHHHHHHHHHhC-CeEEEEECCchh-----------------hhhcCcHHHeeeeEEccccCCCCcCHHHHHHHHHH
Confidence 689999999999998 999999996421 3566764 78788887788899999999999999
Q ss_pred hcCCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCccCc
Q psy4598 133 KNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFFTP 183 (369)
Q Consensus 133 ~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~~p 183 (369)
+ ++++++++||||+.. +|+.+|+++|+.++..
T Consensus 168 ~----~~~~~~~~~vGD~~~---------------~Di~~a~~aG~~~~~v 199 (230)
T 3vay_A 168 A----KVDASAAVHVGDHPS---------------DDIAGAQQAGMRAIWY 199 (230)
T ss_dssp H----TCCGGGEEEEESCTT---------------TTHHHHHHTTCEEEEE
T ss_pred h----CCCchheEEEeCChH---------------HHHHHHHHCCCEEEEE
Confidence 6 799999999999962 6999999999998653
No 63
>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20
Probab=99.45 E-value=1.5e-14 Score=131.58 Aligned_cols=94 Identities=10% Similarity=0.053 Sum_probs=73.1
Q ss_pred ccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHcCC-CeEEEEecCCCC--------CCCCchhH
Q psy4598 55 LFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSLNV-PVQMFVATQYDR--------YRKPVPGM 125 (369)
Q Consensus 55 ~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l~i-~~~~~~~~~~~~--------~rKP~~gm 125 (369)
++|++.+.|+.|+++|++++|+||++ ...+..+++ |+ +++.+++.+... ++||+|.+
T Consensus 78 ~~pg~~~~l~~L~~~g~~~~ivS~~~------------~~~~~~~l~--~l~~~~~v~~~~~~~~~~~~~~~~~kp~p~~ 143 (236)
T 2fea_A 78 IREGFREFVAFINEHEIPFYVISGGM------------DFFVYPLLE--GIVEKDRIYCNHASFDNDYIHIDWPHSCKGT 143 (236)
T ss_dssp BCTTHHHHHHHHHHHTCCEEEEEEEE------------HHHHHHHHT--TTSCGGGEEEEEEECSSSBCEEECTTCCCTT
T ss_pred CCccHHHHHHHHHhCCCeEEEEeCCc------------HHHHHHHHh--cCCCCCeEEeeeeEEcCCceEEecCCCCccc
Confidence 68999999999999999999999953 123344454 54 345455554332 38999995
Q ss_pred -HH-------HHHHHhcCCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCccC
Q psy4598 126 -WE-------YLSQEKNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFFT 182 (369)
Q Consensus 126 -~~-------~~~~~~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~~ 182 (369)
+. .+++++ ++++++++||||+. +|+.+|+++|+.++.
T Consensus 144 ~~~~~~~~K~~~~~~~----~~~~~~~~~vGDs~----------------~Di~~a~~aG~~~~~ 188 (236)
T 2fea_A 144 CSNQCGCCKPSVIHEL----SEPNQYIIMIGDSV----------------TDVEAAKLSDLCFAR 188 (236)
T ss_dssp CCSCCSSCHHHHHHHH----CCTTCEEEEEECCG----------------GGHHHHHTCSEEEEC
T ss_pred cccccCCcHHHHHHHH----hccCCeEEEEeCCh----------------HHHHHHHhCCeeeec
Confidence 54 777876 68999999999998 899999999999874
No 64
>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*
Probab=99.44 E-value=1.9e-13 Score=120.71 Aligned_cols=117 Identities=16% Similarity=0.137 Sum_probs=86.5
Q ss_pred CceEEEEecCCceeecCCCCCCCCCccccccccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHc
Q psy4598 24 SAKIASFDLDGTLITTKSGKVFPVDTHDWKLLFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSL 103 (369)
Q Consensus 24 ~~k~~~fDlDgTLi~~~sg~~~~~~~~d~~~~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l 103 (369)
..|+++||+||||+... ..|.........+...-...|++|+++|++++|+||++. ..+..+++.+
T Consensus 25 ~ik~vifD~DGTL~~~~--~~~~~~~~~~~~~~~~d~~~l~~L~~~g~~v~ivT~~~~------------~~~~~~l~~l 90 (188)
T 2r8e_A 25 NIRLLILDVDGVLSDGL--IYMGNNGEELKAFNVRDGYGIRCALTSDIEVAIITGRKA------------KLVEDRCATL 90 (188)
T ss_dssp TCSEEEECCCCCCBCSE--EEEETTSCEEEEEEHHHHHHHHHHHTTTCEEEEECSSCC------------HHHHHHHHHH
T ss_pred cCCEEEEeCCCCcCCCC--EEecCCCcEEEEeecccHHHHHHHHHCCCeEEEEeCCCh------------HHHHHHHHHc
Confidence 56899999999999632 112222222222222233589999999999999999652 2345667778
Q ss_pred CCCeEEEEecCCCCCCCCchhHHHHHHHHhcCCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCcc
Q psy4598 104 NVPVQMFVATQYDRYRKPVPGMWEYLSQEKNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFF 181 (369)
Q Consensus 104 ~i~~~~~~~~~~~~~rKP~~gm~~~~~~~~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~ 181 (369)
|+. .++. ..||+|.+++.+++++ ++++++++||||+. +|+.+|.++|+.+.
T Consensus 91 gl~--~~~~-----~~kpk~~~~~~~~~~~----g~~~~~~~~iGD~~----------------~Di~~a~~ag~~~~ 141 (188)
T 2r8e_A 91 GIT--HLYQ-----GQSNKLIAFSDLLEKL----AIAPENVAYVGDDL----------------IDWPVMEKVGLSVA 141 (188)
T ss_dssp TCC--EEEC-----SCSCSHHHHHHHHHHH----TCCGGGEEEEESSG----------------GGHHHHTTSSEEEE
T ss_pred CCc--eeec-----CCCCCHHHHHHHHHHc----CCCHHHEEEECCCH----------------HHHHHHHHCCCEEE
Confidence 874 1221 3699999999999986 68899999999999 89999999999975
No 65
>2rhm_A Putative kinase; P-loop containing nucleoside triphosphate hydrolases fold, S genomics, joint center for structural genomics, JCSG; HET: MSE; 1.70A {Chloroflexus aurantiacus}
Probab=99.44 E-value=5e-13 Score=117.38 Aligned_cols=98 Identities=15% Similarity=0.237 Sum_probs=76.2
Q ss_pred ccEEEEEEcCCCCcHHHHHHHHhccCCcEEEeCCcchh------------H---------HHHHHHHHHHHhCCCcEEEe
Q psy4598 271 LDSVLIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTLGS------------W---------QKCVSVMKAALDSGLSVVVD 329 (369)
Q Consensus 271 ~~~lIll~G~pGSGKSTla~~L~~~~~~~~i~~D~~~~------------~---------~~~~~~~~~~l~~g~~vIiD 329 (369)
++.+|+|+|+|||||||+++.|++.+++.+++.|.++. | +.+...+...++.|..||+|
T Consensus 4 ~~~~I~l~G~~GsGKST~~~~L~~~l~~~~i~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~d 83 (193)
T 2rhm_A 4 TPALIIVTGHPATGKTTLSQALATGLRLPLLSKDAFKEVMFDGLGWSDREWSRRVGATAIMMLYHTAATILQSGQSLIME 83 (193)
T ss_dssp CCEEEEEEESTTSSHHHHHHHHHHHHTCCEEEHHHHHHHHHHHHCCCSHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHcCCeEecHHHHHHHHHHhcCccchHHHHHhhHHHHHHHHHHHHHHHhCCCeEEEe
Confidence 46799999999999999999999999999999998742 1 11122345567789999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCCeEEEEEEeCCHHHHHHHc
Q psy4598 330 NTNPDKESRHRYIEAAKQHGVRCIAVHMNISKEHAKHNI 368 (369)
Q Consensus 330 ~tn~~~~~r~~~~~la~~~~~~v~~v~l~~~~e~~~~Rn 368 (369)
.++.....+..+.+++...+.+..+|++++|.+++.+|.
T Consensus 84 ~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~~~e~~~~R~ 122 (193)
T 2rhm_A 84 SNFRVDLDTERMQNLHTIAPFTPIQIRCVASGDVLVERI 122 (193)
T ss_dssp ECCCHHHHHHHHHHHHHHSCCEEEEEEEECCHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHhcCCeEEEEEEeCCHHHHHHHH
Confidence 998322233456666677778899999999999999884
No 66
>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=99.44 E-value=1.3e-13 Score=120.09 Aligned_cols=96 Identities=26% Similarity=0.371 Sum_probs=81.2
Q ss_pred ccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHcCC--CeEEEEecCCCCCCCCchhHHHHHHHH
Q psy4598 55 LFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSLNV--PVQMFVATQYDRYRKPVPGMWEYLSQE 132 (369)
Q Consensus 55 ~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l~i--~~~~~~~~~~~~~rKP~~gm~~~~~~~ 132 (369)
++|++.+.|+.|++.|++++|+||... ..+. .++.+++ .|+.+++......+||++.++..++++
T Consensus 86 ~~~~~~~~l~~l~~~g~~~~i~s~~~~------------~~~~-~~~~~~~~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~ 152 (207)
T 2go7_A 86 LMPGAREVLAWADESGIQQFIYTHKGN------------NAFT-ILKDLGVESYFTEILTSQSGFVRKPSPEAATYLLDK 152 (207)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEECSSCT------------HHHH-HHHHHTCGGGEEEEECGGGCCCCTTSSHHHHHHHHH
T ss_pred eCcCHHHHHHHHHHCCCeEEEEeCCch------------HHHH-HHHHcCchhheeeEEecCcCCCCCCCcHHHHHHHHH
Confidence 579999999999999999999999531 1233 5566676 378888888788899999999999998
Q ss_pred hcCCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCccCc
Q psy4598 133 KNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFFTP 183 (369)
Q Consensus 133 ~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~~p 183 (369)
+ +++++++++|||+. .|+.+|.++|+.++..
T Consensus 153 ~----~i~~~~~~~iGD~~----------------nDi~~~~~aG~~~i~~ 183 (207)
T 2go7_A 153 Y----QLNSDNTYYIGDRT----------------LDVEFAQNSGIQSINF 183 (207)
T ss_dssp H----TCCGGGEEEEESSH----------------HHHHHHHHHTCEEEES
T ss_pred h----CCCcccEEEECCCH----------------HHHHHHHHCCCeEEEE
Confidence 6 78999999999998 8999999999997543
No 67
>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14
Probab=99.43 E-value=8e-13 Score=121.81 Aligned_cols=47 Identities=17% Similarity=0.111 Sum_probs=41.9
Q ss_pred CCCCchhHHHHHHHHhcCCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCccCc
Q psy4598 118 YRKPVPGMWEYLSQEKNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFFTP 183 (369)
Q Consensus 118 ~rKP~~gm~~~~~~~~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~~p 183 (369)
.+||+|.+|+.+++++ ++++++++||||+.. +|+.+|+++|++++..
T Consensus 181 ~~KP~p~~~~~~~~~~----~~~~~~~~~vGD~~~---------------~Di~~a~~aG~~~i~v 227 (264)
T 1yv9_A 181 IGKPKAIIMERAIAHL----GVEKEQVIMVGDNYE---------------TDIQSGIQNGIDSLLV 227 (264)
T ss_dssp CSTTSHHHHHHHHHHH----CSCGGGEEEEESCTT---------------THHHHHHHHTCEEEEE
T ss_pred cCCCCHHHHHHHHHHc----CCCHHHEEEECCCcH---------------HHHHHHHHcCCcEEEE
Confidence 6899999999999996 789999999999931 8999999999998644
No 68
>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6
Probab=99.43 E-value=1.1e-13 Score=122.66 Aligned_cols=96 Identities=10% Similarity=0.172 Sum_probs=82.2
Q ss_pred ccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHcCCC--eEEEEecCCCCCCCCchhHHHHHHHH
Q psy4598 55 LFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSLNVP--VQMFVATQYDRYRKPVPGMWEYLSQE 132 (369)
Q Consensus 55 ~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l~i~--~~~~~~~~~~~~rKP~~gm~~~~~~~ 132 (369)
++|++.+.|+.|++.|++++|+||.. ...+..+++.+++. |+.+++.......||++.+++.++++
T Consensus 95 ~~~~~~~~l~~l~~~g~~~~i~t~~~------------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~ 162 (226)
T 1te2_A 95 LLPGVREAVALCKEQGLLVGLASASP------------LHMLEKVLTMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAK 162 (226)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEESSC------------HHHHHHHHHHTTCGGGCSEEEECTTSSCCTTSTHHHHHHHHH
T ss_pred cCccHHHHHHHHHHCCCcEEEEeCCc------------HHHHHHHHHhcCcHhhCcEEEeccccCCCCCChHHHHHHHHH
Confidence 57899999999999999999999943 22345567777874 77777877788899999999999998
Q ss_pred hcCCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCccC
Q psy4598 133 KNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFFT 182 (369)
Q Consensus 133 ~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~~ 182 (369)
+ +++++++++|||+. .|+.+|+++|+.++.
T Consensus 163 ~----~i~~~~~i~iGD~~----------------nDi~~a~~aG~~~~~ 192 (226)
T 1te2_A 163 L----GVDPLTCVALEDSV----------------NGMIASKAARMRSIV 192 (226)
T ss_dssp H----TSCGGGEEEEESSH----------------HHHHHHHHTTCEEEE
T ss_pred c----CCCHHHeEEEeCCH----------------HHHHHHHHcCCEEEE
Confidence 6 79999999999999 899999999999854
No 69
>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=99.43 E-value=9.7e-14 Score=122.95 Aligned_cols=97 Identities=14% Similarity=0.171 Sum_probs=82.1
Q ss_pred ccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHcCCC--eEEEEecCCCCCCCCchhHHHHHHHH
Q psy4598 55 LFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSLNVP--VQMFVATQYDRYRKPVPGMWEYLSQE 132 (369)
Q Consensus 55 ~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l~i~--~~~~~~~~~~~~rKP~~gm~~~~~~~ 132 (369)
++|++.+.|+.|++.|++++|+||.. ...+...++.+++. |+.+++.+.....||++.++..++++
T Consensus 90 ~~~~~~~~l~~l~~~g~~~~i~s~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~ 157 (225)
T 3d6j_A 90 LFPDTLPTLTHLKKQGIRIGIISTKY------------RFRILSFLRNHMPDDWFDIIIGGEDVTHHKPDPEGLLLAIDR 157 (225)
T ss_dssp ECTTHHHHHHHHHHHTCEEEEECSSC------------HHHHHHHHHTSSCTTCCSEEECGGGCSSCTTSTHHHHHHHHH
T ss_pred cCcCHHHHHHHHHHCCCeEEEEECCC------------HHHHHHHHHHcCchhheeeeeehhhcCCCCCChHHHHHHHHH
Confidence 47899999999999999999999953 12345567777774 67777777777899999999999998
Q ss_pred hcCCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCccCc
Q psy4598 133 KNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFFTP 183 (369)
Q Consensus 133 ~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~~p 183 (369)
+ +++++++++|||+. .|+.+|+++|+.++..
T Consensus 158 ~----~~~~~~~i~iGD~~----------------nDi~~~~~aG~~~~~~ 188 (225)
T 3d6j_A 158 L----KACPEEVLYIGDST----------------VDAGTAAAAGVSFTGV 188 (225)
T ss_dssp T----TCCGGGEEEEESSH----------------HHHHHHHHHTCEEEEE
T ss_pred h----CCChHHeEEEcCCH----------------HHHHHHHHCCCeEEEE
Confidence 6 79999999999999 8999999999988643
No 70
>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0
Probab=99.42 E-value=4.5e-13 Score=118.83 Aligned_cols=117 Identities=16% Similarity=0.178 Sum_probs=86.1
Q ss_pred CceEEEEecCCceeecCCCCCCCCCccccccccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHc
Q psy4598 24 SAKIASFDLDGTLITTKSGKVFPVDTHDWKLLFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSL 103 (369)
Q Consensus 24 ~~k~~~fDlDgTLi~~~sg~~~~~~~~d~~~~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l 103 (369)
..|.++||+||||+... ..+......+..+...-...|+.|+++|++++|+||++. ..+..+++.+
T Consensus 18 ~ik~vifD~DGtL~~~~--~~~~~~~~~~~~~~~~d~~~l~~L~~~g~~~~ivTn~~~------------~~~~~~l~~l 83 (191)
T 3n1u_A 18 KIKCLICDVDGVLSDGL--LHIDNHGNELKSFHVQDGMGLKLLMAAGIQVAIITTAQN------------AVVDHRMEQL 83 (191)
T ss_dssp TCSEEEECSTTTTBCSC--CEECTTCCEECCBCHHHHHHHHHHHHTTCEEEEECSCCS------------HHHHHHHHHH
T ss_pred cCCEEEEeCCCCCCCCc--eeecCCchhhhhccccChHHHHHHHHCCCeEEEEeCcCh------------HHHHHHHHHc
Confidence 46899999999998642 122222222322222222269999999999999999641 3455677888
Q ss_pred CCCeEEEEecCCCCCCCCchhHHHHHHHHhcCCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCcc
Q psy4598 104 NVPVQMFVATQYDRYRKPVPGMWEYLSQEKNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFF 181 (369)
Q Consensus 104 ~i~~~~~~~~~~~~~rKP~~gm~~~~~~~~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~ 181 (369)
|+.. ++. ..||+|.++..+++++ ++++++++||||+. .|+.+|.++|+.+.
T Consensus 84 gl~~--~~~-----~~kpk~~~~~~~~~~~----~~~~~~~~~vGD~~----------------~Di~~~~~ag~~~~ 134 (191)
T 3n1u_A 84 GITH--YYK-----GQVDKRSAYQHLKKTL----GLNDDEFAYIGDDL----------------PDLPLIQQVGLGVA 134 (191)
T ss_dssp TCCE--EEC-----SCSSCHHHHHHHHHHH----TCCGGGEEEEECSG----------------GGHHHHHHSSEEEE
T ss_pred CCcc--cee-----CCCChHHHHHHHHHHh----CCCHHHEEEECCCH----------------HHHHHHHHCCCEEE
Confidence 8752 221 2399999999999986 78999999999999 89999999999873
No 71
>2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A
Probab=99.41 E-value=2.5e-13 Score=122.47 Aligned_cols=125 Identities=14% Similarity=0.204 Sum_probs=83.4
Q ss_pred CceEEEEecCCceeecCCCC------------CCCCCcccc----------ccccccHHHHHHHHHHCCcEEEEEecCCC
Q psy4598 24 SAKIASFDLDGTLITTKSGK------------VFPVDTHDW----------KLLFSNIESVLKQYLDDGYKLVIFTNQGA 81 (369)
Q Consensus 24 ~~k~~~fDlDgTLi~~~sg~------------~~~~~~~d~----------~~~~p~v~~~L~~L~~~G~~i~i~TNq~g 81 (369)
+.|+++||+||||+.+.... .|......| ...+|++.+.|++|+++|++++|+||++.
T Consensus 36 ~~kaviFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~L~~~G~~l~ivTn~~~ 115 (211)
T 2b82_A 36 PPMAVGFDIDDTVLFSSPGFWRGKKTFSPESEDYLKNPVFWEKMNNGWDEFSIPKEVARQLIDMHVRRGDAIFFVTGRSP 115 (211)
T ss_dssp CCCEEEECCBTTTEECHHHHHHHHHHHCTTSSGGGGCHHHHHHHHTTGGGGCEECHHHHHHHHHHHHHTCEEEEEECSCC
T ss_pred CCCEEEEcCCCCCCcCcHHHHHHHHHhhHHHHHHhhhHHHHHHHHHhHHhcCCCcHHHHHHHHHHHHCCCEEEEEcCCcH
Confidence 46899999999999863210 000000111 12467999999999999999999999764
Q ss_pred cCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecC--CCCCCCCchhHHHHHHHHhcCCccccCCccEEeeCccccccccCC
Q psy4598 82 IGRKKMSTRDFQAKAEKIIKSLNVPVQMFVATQ--YDRYRKPVPGMWEYLSQEKNGDLAIDISQSFYAGDAAGRAANWAP 159 (369)
Q Consensus 82 i~~~~~~~~~~~~~i~~~l~~l~i~~~~~~~~~--~~~~rKP~~gm~~~~~~~~~~~~~i~~~~s~~VGD~~gr~~~~~~ 159 (369)
.... . .+..+...++..+ .+.. ....+||+|.+|..+++++ ++ ++||||+.
T Consensus 116 ~~~~----~----~l~~l~~~f~~i~---~~~~~~~~~~~KP~p~~~~~~~~~~----g~----~l~VGDs~-------- 168 (211)
T 2b82_A 116 TKTE----T----VSKTLADNFHIPA---TNMNPVIFAGDKPGQNTKSQWLQDK----NI----RIFYGDSD-------- 168 (211)
T ss_dssp CSSC----C----HHHHHHHHTTCCT---TTBCCCEECCCCTTCCCSHHHHHHT----TE----EEEEESSH--------
T ss_pred HHHH----H----HHHHHHHhcCccc---cccchhhhcCCCCCHHHHHHHHHHC----CC----EEEEECCH--------
Confidence 2211 1 1112222233210 1111 1235899999999999986 45 99999999
Q ss_pred CCCCCCCcccHHHHHhCCCCccCc
Q psy4598 160 KKKKDFACTDHLFAFNLNLAFFTP 183 (369)
Q Consensus 160 ~~~~d~s~~D~~~A~n~Gi~f~~p 183 (369)
.|+++|+++||+++..
T Consensus 169 --------~Di~aA~~aG~~~i~v 184 (211)
T 2b82_A 169 --------NDITAARDVGARGIRI 184 (211)
T ss_dssp --------HHHHHHHHTTCEEEEC
T ss_pred --------HHHHHHHHCCCeEEEE
Confidence 8999999999998644
No 72
>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A
Probab=99.41 E-value=7.1e-14 Score=123.89 Aligned_cols=93 Identities=12% Similarity=0.153 Sum_probs=80.0
Q ss_pred ccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHcCCC--eEEEEecCCCCCCCCchhHHHHHHHH
Q psy4598 55 LFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSLNVP--VQMFVATQYDRYRKPVPGMWEYLSQE 132 (369)
Q Consensus 55 ~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l~i~--~~~~~~~~~~~~rKP~~gm~~~~~~~ 132 (369)
++|++.+.|+.|++.|++++|+||.. .+..+++.+++. |+.+++.+.....||+|.+++.++++
T Consensus 92 ~~~~~~~~l~~l~~~g~~~~i~t~~~--------------~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~ 157 (221)
T 2wf7_A 92 VYPGILQLLKDLRSNKIKIALASASK--------------NGPFLLERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHA 157 (221)
T ss_dssp BCTTHHHHHHHHHHTTCEEEECCCCT--------------THHHHHHHTTCGGGCSEECCTTTSSSCTTSSHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHCCCeEEEEcCcH--------------HHHHHHHHcChHHHcceEeccccCCCCCCChHHHHHHHHH
Confidence 46899999999999999999999940 123456677773 77778888888999999999999998
Q ss_pred hcCCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCcc
Q psy4598 133 KNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFF 181 (369)
Q Consensus 133 ~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~ 181 (369)
+ ++++++++||||+. .|+.+|+++|+.++
T Consensus 158 l----gi~~~~~i~iGD~~----------------nDi~~a~~aG~~~~ 186 (221)
T 2wf7_A 158 V----GVAPSESIGLEDSQ----------------AGIQAIKDSGALPI 186 (221)
T ss_dssp T----TCCGGGEEEEESSH----------------HHHHHHHHHTCEEE
T ss_pred c----CCChhHeEEEeCCH----------------HHHHHHHHCCCEEE
Confidence 6 79999999999999 89999999999985
No 73
>2p5t_B PEZT; postsegregational killing system, phosphoryltransferase, HEL helix motif, transcription regulator; 3.20A {Streptococcus pneumoniae}
Probab=99.41 E-value=1.3e-12 Score=120.79 Aligned_cols=100 Identities=14% Similarity=0.221 Sum_probs=82.7
Q ss_pred ccccEEEEEEcCCCCcHHHHHHHHhccCC--cEEEeCCcchh------------------H-----HH-HHHHHHHHHhC
Q psy4598 269 AALDSVLIMIGSQGSGKSSFVSTYLKPLN--YTTVNRDTLGS------------------W-----QK-CVSVMKAALDS 322 (369)
Q Consensus 269 ~~~~~lIll~G~pGSGKSTla~~L~~~~~--~~~i~~D~~~~------------------~-----~~-~~~~~~~~l~~ 322 (369)
..+|.+|+|+|+|||||||+++.|++.++ +.+++.|.++. + .. ....+..+++.
T Consensus 29 ~~~~~~i~l~G~~GsGKSTla~~L~~~l~~~~~~~~~D~~r~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (253)
T 2p5t_B 29 SKQPIAILLGGQSGAGKTTIHRIKQKEFQGNIVIIDGDSFRSQHPHYLELQQEYGKDSVEYTKDFAGKMVESLVTKLSSL 108 (253)
T ss_dssp CSSCEEEEEESCGGGTTHHHHHHHHHHTTTCCEEECGGGGGTTSTTHHHHHTTCSSTTHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccCCeEEEEECCCCCCHHHHHHHHHHhcCCCcEEEecHHHHHhchhHHHHHHHcCchHHHHhhHHHHHHHHHHHHHHHhc
Confidence 34568999999999999999999999875 78899998742 1 11 12344556677
Q ss_pred CCcEEEeCCCCCHHHHHHHHHHHHhcCCeEEEEEEeCCHHHHHHHc
Q psy4598 323 GLSVVVDNTNPDKESRHRYIEAAKQHGVRCIAVHMNISKEHAKHNI 368 (369)
Q Consensus 323 g~~vIiD~tn~~~~~r~~~~~la~~~~~~v~~v~l~~~~e~~~~Rn 368 (369)
|.+||+|+++.....+..+..+++++++.+.++++++|.+++.+|.
T Consensus 109 g~~vVid~~~~~~~~~~~~~~~l~~~g~~v~lv~l~~~~e~~~~R~ 154 (253)
T 2p5t_B 109 GYNLLIEGTLRTVDVPKKTAQLLKNKGYEVQLALIATKPELSYLST 154 (253)
T ss_dssp TCCEEEECCTTSSHHHHHHHHHHHHTTCEEEEEEECCCHHHHHHHH
T ss_pred CCCEEEeCCCCCHHHHHHHHHHHHHCCCcEEEEEEeCCHHHHHHHH
Confidence 8899999999888889999999999999999999999999999885
No 74
>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}
Probab=99.41 E-value=1.9e-13 Score=122.05 Aligned_cols=100 Identities=13% Similarity=0.107 Sum_probs=82.3
Q ss_pred ccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHcCCC--eEEEEecCCCCCCCCchhHHHHHHHH
Q psy4598 55 LFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSLNVP--VQMFVATQYDRYRKPVPGMWEYLSQE 132 (369)
Q Consensus 55 ~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l~i~--~~~~~~~~~~~~rKP~~gm~~~~~~~ 132 (369)
++|++.+.|+.|++.|++++|+||.. . .. ...+...++.+|+. |+.+++.+.....||+|.++..++++
T Consensus 100 ~~~~~~~~l~~l~~~g~~~~i~t~~~-~----~~----~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~ 170 (235)
T 2om6_A 100 VLEGTKEALQFVKERGLKTAVIGNVM-F----WP----GSYTRLLLERFGLMEFIDKTFFADEVLSYKPRKEMFEKVLNS 170 (235)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEECCC-S----SC----HHHHHHHHHHTTCGGGCSEEEEHHHHTCCTTCHHHHHHHHHH
T ss_pred cCccHHHHHHHHHHCCCEEEEEcCCc-c----cc----hhHHHHHHHhCCcHHHhhhheeccccCCCCCCHHHHHHHHHH
Confidence 37999999999999999999999953 1 11 12345567777874 77777777777899999999999999
Q ss_pred hcCCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCccC
Q psy4598 133 KNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFFT 182 (369)
Q Consensus 133 ~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~~ 182 (369)
+ +++++++++|||+.. .|+.+|+++|+.++.
T Consensus 171 l----gi~~~~~~~iGD~~~---------------nDi~~a~~aG~~~~~ 201 (235)
T 2om6_A 171 F----EVKPEESLHIGDTYA---------------EDYQGARKVGMWAVW 201 (235)
T ss_dssp T----TCCGGGEEEEESCTT---------------TTHHHHHHTTSEEEE
T ss_pred c----CCCccceEEECCChH---------------HHHHHHHHCCCEEEE
Confidence 6 799999999999972 599999999999854
No 75
>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}
Probab=99.40 E-value=4.6e-13 Score=121.66 Aligned_cols=96 Identities=20% Similarity=0.280 Sum_probs=82.7
Q ss_pred ccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHcCC-CeEEEEecCCCCCCCCchhHHHHHHHHh
Q psy4598 55 LFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSLNV-PVQMFVATQYDRYRKPVPGMWEYLSQEK 133 (369)
Q Consensus 55 ~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l~i-~~~~~~~~~~~~~rKP~~gm~~~~~~~~ 133 (369)
++||+.+.|+.|+++|++++|+||++ ...+..+++.+|+ .|+.+++.+....+||+|.+|..+++++
T Consensus 111 ~~~g~~~~l~~l~~~g~~~~i~t~~~------------~~~~~~~l~~~~l~~f~~~~~~~~~~~~Kp~p~~~~~~~~~l 178 (240)
T 2hi0_A 111 PFPGILDLMKNLRQKGVKLAVVSNKP------------NEAVQVLVEELFPGSFDFALGEKSGIRRKPAPDMTSECVKVL 178 (240)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEEEEE------------HHHHHHHHHHHSTTTCSEEEEECTTSCCTTSSHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHCCCEEEEEeCCC------------HHHHHHHHHHcCCcceeEEEecCCCCCCCCCHHHHHHHHHHc
Confidence 57999999999999999999999953 1234556677776 5888888888889999999999999996
Q ss_pred cCCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCccC
Q psy4598 134 NGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFFT 182 (369)
Q Consensus 134 ~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~~ 182 (369)
++++++|+||||+. .|+.+|+++|+.++.
T Consensus 179 ----~~~~~~~~~vGDs~----------------~Di~~a~~aG~~~v~ 207 (240)
T 2hi0_A 179 ----GVPRDKCVYIGDSE----------------IDIQTARNSEMDEIA 207 (240)
T ss_dssp ----TCCGGGEEEEESSH----------------HHHHHHHHTTCEEEE
T ss_pred ----CCCHHHeEEEcCCH----------------HHHHHHHHCCCeEEE
Confidence 79999999999998 899999999998753
No 76
>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A
Probab=99.40 E-value=1e-12 Score=120.08 Aligned_cols=47 Identities=15% Similarity=0.061 Sum_probs=42.2
Q ss_pred CCCCchhHHHHHHHHhcCCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCccCc
Q psy4598 118 YRKPVPGMWEYLSQEKNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFFTP 183 (369)
Q Consensus 118 ~rKP~~gm~~~~~~~~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~~p 183 (369)
.+||+|.+|+.+++++ ++++++++||||+.. +|+.+|+++|++++..
T Consensus 177 ~~Kp~~~~~~~~~~~l----gi~~~~~~~iGD~~~---------------~Di~~a~~aG~~~i~v 223 (259)
T 2ho4_A 177 VGKPEKTFFLEALRDA----DCAPEEAVMIGDDCR---------------DDVDGAQNIGMLGILV 223 (259)
T ss_dssp CSTTSHHHHHHHGGGG----TCCGGGEEEEESCTT---------------TTHHHHHHTTCEEEEE
T ss_pred ecCCCHHHHHHHHHHc----CCChHHEEEECCCcH---------------HHHHHHHHCCCcEEEE
Confidence 5899999999999986 799999999999962 7999999999998654
No 77
>3a4m_A L-seryl-tRNA(SEC) kinase; P-loop motif, walker A motif, ATP binding motif, ATP- binding, nucleotide-binding, transferase; HET: ADP; 1.79A {Methanocaldococcus jannaschii} PDB: 3a4l_A* 3a4n_A 3am1_A* 3add_A* 3adc_A* 3adb_A*
Probab=99.39 E-value=1.9e-12 Score=120.22 Aligned_cols=96 Identities=23% Similarity=0.277 Sum_probs=79.5
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhcc---CCcEEE--eCCcchh------------HH-HHHHHHHHHHhCCCcEEEeCCCC
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKP---LNYTTV--NRDTLGS------------WQ-KCVSVMKAALDSGLSVVVDNTNP 333 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~---~~~~~i--~~D~~~~------------~~-~~~~~~~~~l~~g~~vIiD~tn~ 333 (369)
+.+|+|+|+|||||||+++.|++. .++.++ +.|.++. +. .....+..+++. ..||+|+++.
T Consensus 4 ~~lIvl~G~pGSGKSTla~~La~~L~~~g~~~i~~~~D~~~~~l~~~~~~~e~~~~~~~~~~i~~~l~~-~~vIiD~~~~ 82 (260)
T 3a4m_A 4 IMLIILTGLPGVGKSTFSKNLAKILSKNNIDVIVLGSDLIRESFPVWKEKYEEFIKKSTYRLIDSALKN-YWVIVDDTNY 82 (260)
T ss_dssp CEEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEECTHHHHTTSSSCCGGGHHHHHHHHHHHHHHHHTT-SEEEECSCCC
T ss_pred CEEEEEEcCCCCCHHHHHHHHHHHHHhCCCEEEEECchHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhC-CEEEEeCCcc
Confidence 579999999999999999999987 666665 8887642 11 122344556666 7899999999
Q ss_pred CHHHHHHHHHHHHhcCCeEEEEEEeCCHHHHHHHc
Q psy4598 334 DKESRHRYIEAAKQHGVRCIAVHMNISKEHAKHNI 368 (369)
Q Consensus 334 ~~~~r~~~~~la~~~~~~v~~v~l~~~~e~~~~Rn 368 (369)
....|..+.++++..+.+..+|++++|.+++.+|+
T Consensus 83 ~~~~~~~l~~~a~~~~~~~~vi~l~~~~e~~~~R~ 117 (260)
T 3a4m_A 83 YNSMRRDLINIAKKYNKNYAIIYLKASLDVLIRRN 117 (260)
T ss_dssp SHHHHHHHHHHHHHTTCEEEEEEEECCHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCCEEEEEEeCCHHHHHHHH
Confidence 99999999999999999999999999999999986
No 78
>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}
Probab=99.39 E-value=2e-13 Score=121.43 Aligned_cols=93 Identities=17% Similarity=0.151 Sum_probs=76.4
Q ss_pred ccccHHHHHHHHHHCC-cEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHcCC--CeEEEEecCCCCCCCCchhHHHHHHH
Q psy4598 55 LFSNIESVLKQYLDDG-YKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSLNV--PVQMFVATQYDRYRKPVPGMWEYLSQ 131 (369)
Q Consensus 55 ~~p~v~~~L~~L~~~G-~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l~i--~~~~~~~~~~~~~rKP~~gm~~~~~~ 131 (369)
++|++.+.|+.|++.| ++++|+||.. ...+..+++.+++ .|+.+++. .||+|.+++.+++
T Consensus 106 ~~~~~~~~l~~l~~~g~~~~~i~t~~~------------~~~~~~~l~~~~~~~~f~~~~~~-----~kpk~~~~~~~~~ 168 (234)
T 3ddh_A 106 LLPGVKETLKTLKETGKYKLVVATKGD------------LLDQENKLERSGLSPYFDHIEVM-----SDKTEKEYLRLLS 168 (234)
T ss_dssp BCTTHHHHHHHHHHHCCCEEEEEEESC------------HHHHHHHHHHHTCGGGCSEEEEE-----SCCSHHHHHHHHH
T ss_pred cCccHHHHHHHHHhCCCeEEEEEeCCc------------hHHHHHHHHHhCcHhhhheeeec-----CCCCHHHHHHHHH
Confidence 5899999999999999 9999999943 2234556677776 36655543 5899999999999
Q ss_pred HhcCCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCccCc
Q psy4598 132 EKNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFFTP 183 (369)
Q Consensus 132 ~~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~~p 183 (369)
++ ++++++++||||+.. +|+.+|.++|+.++..
T Consensus 169 ~l----gi~~~~~i~iGD~~~---------------~Di~~a~~aG~~~v~v 201 (234)
T 3ddh_A 169 IL----QIAPSELLMVGNSFK---------------SDIQPVLSLGGYGVHI 201 (234)
T ss_dssp HH----TCCGGGEEEEESCCC---------------CCCHHHHHHTCEEEEC
T ss_pred Hh----CCCcceEEEECCCcH---------------HHhHHHHHCCCeEEEe
Confidence 96 799999999999942 7999999999998643
No 79
>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae}
Probab=99.38 E-value=1.3e-13 Score=128.24 Aligned_cols=96 Identities=13% Similarity=0.032 Sum_probs=81.0
Q ss_pred ccccHHHHHHHHHHC-CcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHcCCC-eEEEEecCCCCCCCCchhHHHHHHHH
Q psy4598 55 LFSNIESVLKQYLDD-GYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSLNVP-VQMFVATQYDRYRKPVPGMWEYLSQE 132 (369)
Q Consensus 55 ~~p~v~~~L~~L~~~-G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l~i~-~~~~~~~~~~~~rKP~~gm~~~~~~~ 132 (369)
++|++.+.|+.|++. |++++|+||.. ...+..+++.+++. |+.+++.+.....||+|.++..++++
T Consensus 115 ~~~g~~~~L~~l~~~~g~~l~i~T~~~------------~~~~~~~l~~~~l~~f~~i~~~~~~~~~kp~~~~~~~~~~~ 182 (275)
T 2qlt_A 115 EVPGAVKLCNALNALPKEKWAVATSGT------------RDMAKKWFDILKIKRPEYFITANDVKQGKPHPEPYLKGRNG 182 (275)
T ss_dssp ECTTHHHHHHHHHTSCGGGEEEECSSC------------HHHHHHHHHHHTCCCCSSEECGGGCSSCTTSSHHHHHHHHH
T ss_pred cCcCHHHHHHHHHhccCCeEEEEeCCC------------HHHHHHHHHHcCCCccCEEEEcccCCCCCCChHHHHHHHHH
Confidence 479999999999999 99999999953 12345556666763 67777777778899999999999998
Q ss_pred hcCCccc-------cCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCccC
Q psy4598 133 KNGDLAI-------DISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFFT 182 (369)
Q Consensus 133 ~~~~~~i-------~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~~ 182 (369)
+ ++ +++++++|||+. .|+.+|+++|+.++.
T Consensus 183 l----gi~~~~~~~~~~~~i~~GDs~----------------nDi~~a~~AG~~~i~ 219 (275)
T 2qlt_A 183 L----GFPINEQDPSKSKVVVFEDAP----------------AGIAAGKAAGCKIVG 219 (275)
T ss_dssp T----TCCCCSSCGGGSCEEEEESSH----------------HHHHHHHHTTCEEEE
T ss_pred c----CCCccccCCCcceEEEEeCCH----------------HHHHHHHHcCCEEEE
Confidence 6 68 999999999999 899999999999854
No 80
>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A
Probab=99.38 E-value=5.2e-13 Score=126.01 Aligned_cols=123 Identities=15% Similarity=0.164 Sum_probs=91.8
Q ss_pred ceEEEEecCCceeecCCCCCCCCCccccc-----cccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHH
Q psy4598 25 AKIASFDLDGTLITTKSGKVFPVDTHDWK-----LLFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKI 99 (369)
Q Consensus 25 ~k~~~fDlDgTLi~~~sg~~~~~~~~d~~-----~~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~ 99 (369)
.+.+.+|.|||+..... ..+.+|. .++||+.+.|+.|+++|++++|+||.+..... .+...
T Consensus 159 ~~~i~iD~dgtl~~~~~-----~~~~~~~~~~~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~---------~~~~~ 224 (301)
T 1ltq_A 159 PKAVIFDVDGTLAKMNG-----RGPYDLEKCDTDVINPMVVELSKMYALMGYQIVVVSGRESGTKE---------DPTKY 224 (301)
T ss_dssp CEEEEEETBTTTBCCSS-----CCTTCGGGGGGCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSS---------STTHH
T ss_pred cceEEEeCCCCcccccC-----CCchhhhhccccCCChHHHHHHHHHHHCCCeEEEEeCCCcccch---------hHHHH
Confidence 46788999999865421 2233442 36899999999999999999999997632211 12233
Q ss_pred HHH--------cCCCeEEEEecCCCCCCCCchhHHHHHHHHhcCCccccCC-ccEEeeCccccccccCCCCCCCCCcccH
Q psy4598 100 IKS--------LNVPVQMFVATQYDRYRKPVPGMWEYLSQEKNGDLAIDIS-QSFYAGDAAGRAANWAPKKKKDFACTDH 170 (369)
Q Consensus 100 l~~--------l~i~~~~~~~~~~~~~rKP~~gm~~~~~~~~~~~~~i~~~-~s~~VGD~~gr~~~~~~~~~~d~s~~D~ 170 (369)
++. +|++|+.+++.+.. .+||+|.++..+++++ ...+. .++||||+. .|+
T Consensus 225 l~~~~~~~~~~~~~~~~~~~~~~~~-~~kp~p~~~~~~~~~~----~~~~~~~~~~vgD~~----------------~di 283 (301)
T 1ltq_A 225 YRMTRKWVEDIAGVPLVMQCQREQG-DTRKDDVVKEEIFWKH----IAPHFDVKLAIDDRT----------------QVV 283 (301)
T ss_dssp HHHHHHHHHHTTCCCCSEEEECCTT-CCSCHHHHHHHHHHHH----TTTTCEEEEEEECCH----------------HHH
T ss_pred HHhcccccccccCCCchheeeccCC-CCcHHHHHHHHHHHHH----hccccceEEEeCCcH----------------HHH
Confidence 445 78888877766554 5799999999999885 34444 479999999 899
Q ss_pred HHHHhCCCCccC
Q psy4598 171 LFAFNLNLAFFT 182 (369)
Q Consensus 171 ~~A~n~Gi~f~~ 182 (369)
++|+++||+++.
T Consensus 284 ~~a~~aG~~~~~ 295 (301)
T 1ltq_A 284 EMWRRIGVECWQ 295 (301)
T ss_dssp HHHHHTTCCEEE
T ss_pred HHHHHcCCeEEE
Confidence 999999999864
No 81
>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A
Probab=99.38 E-value=5.9e-13 Score=117.72 Aligned_cols=117 Identities=24% Similarity=0.292 Sum_probs=84.0
Q ss_pred CceEEEEecCCceeecCCCCCCCCCccccccccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHc
Q psy4598 24 SAKIASFDLDGTLITTKSGKVFPVDTHDWKLLFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSL 103 (369)
Q Consensus 24 ~~k~~~fDlDgTLi~~~sg~~~~~~~~d~~~~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l 103 (369)
..|.++||+||||+++.. .+.........+...-...|++|+++|++++|+||.+ ...++.+++.+
T Consensus 18 ~ik~vifD~DGTL~d~~~--~~~~~~~~~~~~~~~~~~~l~~L~~~g~~~~i~T~~~------------~~~~~~~~~~l 83 (189)
T 3mn1_A 18 AIKLAVFDVDGVLTDGRL--YFMEDGSEIKTFNTLDGQGIKMLIASGVTTAIISGRK------------TAIVERRAKSL 83 (189)
T ss_dssp TCCEEEECSTTTTSCSEE--EEETTSCEEEEEEHHHHHHHHHHHHTTCEEEEECSSC------------CHHHHHHHHHH
T ss_pred hCCEEEEcCCCCcCCccE--eeccCCcEeeeeccccHHHHHHHHHCCCEEEEEECcC------------hHHHHHHHHHc
Confidence 468999999999997631 1222111111111111238999999999999999954 23456677888
Q ss_pred CCCeEEEEecCCCCCCCCchhHHHHHHHHhcCCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCcc
Q psy4598 104 NVPVQMFVATQYDRYRKPVPGMWEYLSQEKNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFF 181 (369)
Q Consensus 104 ~i~~~~~~~~~~~~~rKP~~gm~~~~~~~~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~ 181 (369)
|+. .++ .. .+|+|.+++.+++++ ++++++++||||+. .|+.+|.++|+.+.
T Consensus 84 gl~-~~f-~~-----~~~K~~~~~~~~~~~----g~~~~~~~~vGD~~----------------nDi~~~~~ag~~~~ 134 (189)
T 3mn1_A 84 GIE-HLF-QG-----REDKLVVLDKLLAEL----QLGYEQVAYLGDDL----------------PDLPVIRRVGLGMA 134 (189)
T ss_dssp TCS-EEE-CS-----CSCHHHHHHHHHHHH----TCCGGGEEEEECSG----------------GGHHHHHHSSEEEE
T ss_pred CCH-HHh-cC-----cCChHHHHHHHHHHc----CCChhHEEEECCCH----------------HHHHHHHHCCCeEE
Confidence 874 112 11 277789999999986 78999999999999 89999999999864
No 82
>1gvn_B Zeta; postsegregational killing system, plasmid; 1.95A {Streptococcus pyogenes} SCOP: c.37.1.21 PDB: 3q8x_B*
Probab=99.38 E-value=2.2e-12 Score=121.83 Aligned_cols=99 Identities=17% Similarity=0.280 Sum_probs=82.5
Q ss_pred ccccEEEEEEcCCCCcHHHHHHHHhccC--CcEEEeCCcchh-----------------------HHH-HHHHHHHHHhC
Q psy4598 269 AALDSVLIMIGSQGSGKSSFVSTYLKPL--NYTTVNRDTLGS-----------------------WQK-CVSVMKAALDS 322 (369)
Q Consensus 269 ~~~~~lIll~G~pGSGKSTla~~L~~~~--~~~~i~~D~~~~-----------------------~~~-~~~~~~~~l~~ 322 (369)
..++.+|+|+|+|||||||+++.|++.+ ++.+|+.|.++. +.. ....+.++++.
T Consensus 30 ~~~~~livl~G~sGsGKSTla~~L~~~~~~~~~~Is~D~~R~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~v~~~l~~ 109 (287)
T 1gvn_B 30 VESPTAFLLGGQPGSGKTSLRSAIFEETQGNVIVIDNDTFKQQHPNFDELVKLYEKDVVKHVTPYSNRMTEAIISRLSDQ 109 (287)
T ss_dssp CSSCEEEEEECCTTSCTHHHHHHHHHHTTTCCEEECTHHHHTTSTTHHHHHHHHGGGCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEECCCCCCHHHHHHHHHHHhCCCeEEEechHhHHhchhhHHHHHHccchhhhhhhHHHHHHHHHHHHHHHhc
Confidence 3457899999999999999999999887 789999998741 111 12344566778
Q ss_pred CCcEEEeCCCCCHHHHHHHHHHHHhcCCeEEEEEEeCCHHHH----HHH
Q psy4598 323 GLSVVVDNTNPDKESRHRYIEAAKQHGVRCIAVHMNISKEHA----KHN 367 (369)
Q Consensus 323 g~~vIiD~tn~~~~~r~~~~~la~~~~~~v~~v~l~~~~e~~----~~R 367 (369)
|.+||+|.++.....+..+++.+++.|+++.+++|.+|++++ .+|
T Consensus 110 g~~vIld~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~p~~~~~l~~~~R 158 (287)
T 1gvn_B 110 GYNLVIEGTGRTTDVPIQTATMLQAKGYETKMYVMAVPKINSYLGTIER 158 (287)
T ss_dssp TCCEEECCCCCCSHHHHHHHHHHHTTTCEEEEEEECCCHHHHHHHHHHH
T ss_pred CCeEEEECCCCCHHHHHHHHHHHHhCCCcEEEEEEECCHHHHHHHHHHH
Confidence 999999999998888889999999999999999999999999 666
No 83
>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6
Probab=99.37 E-value=5.8e-13 Score=119.16 Aligned_cols=96 Identities=15% Similarity=0.058 Sum_probs=77.1
Q ss_pred ccccHHHHHHHHHHC-CcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHcCCC--eEEEEecCCCC-CCCCchhHHHHHH
Q psy4598 55 LFSNIESVLKQYLDD-GYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSLNVP--VQMFVATQYDR-YRKPVPGMWEYLS 130 (369)
Q Consensus 55 ~~p~v~~~L~~L~~~-G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l~i~--~~~~~~~~~~~-~rKP~~gm~~~~~ 130 (369)
++|++.+.|+.|++. |++++|+||.. ...+...++.+|+. |+..++..+.. ..||.+.+++.++
T Consensus 94 ~~~~~~~~l~~l~~~~g~~~~i~t~~~------------~~~~~~~l~~~~l~~~f~~~~~~~~~~~~~k~~~~~~~~~~ 161 (234)
T 2hcf_A 94 LLEGVRELLDALSSRSDVLLGLLTGNF------------EASGRHKLKLPGIDHYFPFGAFADDALDRNELPHIALERAR 161 (234)
T ss_dssp ECTTHHHHHHHHHTCTTEEEEEECSSC------------HHHHHHHHHTTTCSTTCSCEECTTTCSSGGGHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHhCCCceEEEEcCCc------------HHHHHHHHHHCCchhhcCcceecCCCcCccchHHHHHHHHH
Confidence 578999999999999 99999999943 22345567788873 66545544433 4568899999999
Q ss_pred HHhcCCcc--ccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCccC
Q psy4598 131 QEKNGDLA--IDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFFT 182 (369)
Q Consensus 131 ~~~~~~~~--i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~~ 182 (369)
+++ + +++++++||||+. .|+.+|+++|+.++.
T Consensus 162 ~~l----g~~~~~~~~i~iGD~~----------------~Di~~a~~aG~~~i~ 195 (234)
T 2hcf_A 162 RMT----GANYSPSQIVIIGDTE----------------HDIRCARELDARSIA 195 (234)
T ss_dssp HHH----CCCCCGGGEEEEESSH----------------HHHHHHHTTTCEEEE
T ss_pred HHh----CCCCCcccEEEECCCH----------------HHHHHHHHCCCcEEE
Confidence 986 6 8999999999999 899999999998754
No 84
>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}
Probab=99.37 E-value=6.9e-13 Score=119.72 Aligned_cols=115 Identities=13% Similarity=0.122 Sum_probs=85.4
Q ss_pred CceEEEEecCCceeecCCCCCCCCCcccccc--ccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHH
Q psy4598 24 SAKIASFDLDGTLITTKSGKVFPVDTHDWKL--LFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIK 101 (369)
Q Consensus 24 ~~k~~~fDlDgTLi~~~sg~~~~~~~~d~~~--~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~ 101 (369)
..|.++||+||||+++. ..+......+.. +.++. .|+.|+++|++++|+||.+ ...+..+++
T Consensus 48 ~ik~viFDlDGTL~Ds~--~~~~~~~~~~~~~~~~d~~--~L~~L~~~G~~l~I~T~~~------------~~~~~~~l~ 111 (211)
T 3ij5_A 48 NIRLLICDVDGVMSDGL--IYMGNQGEELKAFNVRDGY--GIRCLITSDIDVAIITGRR------------AKLLEDRAN 111 (211)
T ss_dssp TCSEEEECCTTTTSSSE--EEEETTSCEEEEEEHHHHH--HHHHHHHTTCEEEEECSSC------------CHHHHHHHH
T ss_pred CCCEEEEeCCCCEECCH--HHHhhhhHHHHHhccchHH--HHHHHHHCCCEEEEEeCCC------------HHHHHHHHH
Confidence 45899999999999763 122222222221 12233 8999999999999999953 234566788
Q ss_pred HcCCCeEEEEecCCCCCCCCchhHHHHHHHHhcCCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCcc
Q psy4598 102 SLNVPVQMFVATQYDRYRKPVPGMWEYLSQEKNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFF 181 (369)
Q Consensus 102 ~l~i~~~~~~~~~~~~~rKP~~gm~~~~~~~~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~ 181 (369)
.+|+.- ++. ..||+|.+++.+++++ ++++++++||||+. .|+.+|+++|+.+.
T Consensus 112 ~lgi~~--~f~-----~~k~K~~~l~~~~~~l----g~~~~~~~~vGDs~----------------nDi~~~~~ag~~~a 164 (211)
T 3ij5_A 112 TLGITH--LYQ-----GQSDKLVAYHELLATL----QCQPEQVAYIGDDL----------------IDWPVMAQVGLSVA 164 (211)
T ss_dssp HHTCCE--EEC-----SCSSHHHHHHHHHHHH----TCCGGGEEEEECSG----------------GGHHHHTTSSEEEE
T ss_pred HcCCch--hhc-----ccCChHHHHHHHHHHc----CcCcceEEEEcCCH----------------HHHHHHHHCCCEEE
Confidence 888741 221 1299999999999986 79999999999999 89999999999875
No 85
>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A
Probab=99.36 E-value=8.7e-13 Score=121.08 Aligned_cols=96 Identities=15% Similarity=0.106 Sum_probs=76.8
Q ss_pred ccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHcCC--C-eEEEEecCCCCCCCCchhHHHHHHH
Q psy4598 55 LFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSLNV--P-VQMFVATQYDRYRKPVPGMWEYLSQ 131 (369)
Q Consensus 55 ~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l~i--~-~~~~~~~~~~~~rKP~~gm~~~~~~ 131 (369)
++|++.+.|+.|++.|++++|+||.+ .. .+..+++.+|+ . ++.+++.+....+||+|.++..+++
T Consensus 104 ~~~~~~~~l~~l~~~g~~~~i~t~~~--------~~----~~~~~l~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~ 171 (267)
T 1swv_A 104 PINGVKEVIASLRERGIKIGSTTGYT--------RE----MMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAM 171 (267)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEBCSSC--------HH----HHHHHHHHHHHTTCCCSCCBCGGGSSCCTTSSHHHHHHHH
T ss_pred cCccHHHHHHHHHHcCCeEEEEcCCC--------HH----HHHHHHHHcCCcccChHheecCCccCCCCCCHHHHHHHHH
Confidence 47899999999999999999999953 11 22333444332 2 3666677777789999999999999
Q ss_pred HhcCCccccC-CccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCccC
Q psy4598 132 EKNGDLAIDI-SQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFFT 182 (369)
Q Consensus 132 ~~~~~~~i~~-~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~~ 182 (369)
++ ++++ ++++||||+. .|+.+|+++|+.++.
T Consensus 172 ~l----gi~~~~~~i~iGD~~----------------nDi~~a~~aG~~~i~ 203 (267)
T 1swv_A 172 EL----GVYPMNHMIKVGDTV----------------SDMKEGRNAGMWTVG 203 (267)
T ss_dssp HH----TCCSGGGEEEEESSH----------------HHHHHHHHTTSEEEE
T ss_pred Hh----CCCCCcCEEEEeCCH----------------HHHHHHHHCCCEEEE
Confidence 86 7888 9999999999 899999999998754
No 86
>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*
Probab=99.35 E-value=3.6e-12 Score=117.69 Aligned_cols=50 Identities=24% Similarity=0.442 Sum_probs=42.9
Q ss_pred CCCCceEEEEecCCceeecCCCCCCCCCccccccccccHHHHHHHHHHCCcEEEEEecCCCcC
Q psy4598 21 VCNSAKIASFDLDGTLITTKSGKVFPVDTHDWKLLFSNIESVLKQYLDDGYKLVIFTNQGAIG 83 (369)
Q Consensus 21 ~~~~~k~~~fDlDgTLi~~~sg~~~~~~~~d~~~~~p~v~~~L~~L~~~G~~i~i~TNq~gi~ 83 (369)
+..+.+.++||+||||+.+. .+.|++.++|++|+++|++++++||++|..
T Consensus 13 ~~~~~~~v~~DlDGTLl~~~-------------~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~ 62 (271)
T 1vjr_A 13 VLDKIELFILDMDGTFYLDD-------------SLLPGSLEFLETLKEKNKRFVFFTNNSSLG 62 (271)
T ss_dssp GGGGCCEEEECCBTTTEETT-------------EECTTHHHHHHHHHHTTCEEEEEESCTTSC
T ss_pred cccCCCEEEEcCcCcEEeCC-------------EECcCHHHHHHHHHHcCCeEEEEECCCCCC
Confidence 44667999999999999752 267999999999999999999999998754
No 87
>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A
Probab=99.35 E-value=9.8e-13 Score=117.90 Aligned_cols=93 Identities=14% Similarity=0.167 Sum_probs=71.6
Q ss_pred ccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHcCCC----eEEE---------EecCCCC---C
Q psy4598 55 LFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSLNVP----VQMF---------VATQYDR---Y 118 (369)
Q Consensus 55 ~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l~i~----~~~~---------~~~~~~~---~ 118 (369)
++||+.+.|+.|+++|++++|+||++ ...++.+++.+|+. |+.. .+.+... .
T Consensus 87 ~~~g~~~~l~~L~~~g~~~~i~T~~~------------~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 154 (225)
T 1nnl_A 87 LTPGIRELVSRLQERNVQVFLISGGF------------RSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAE 154 (225)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEEEE------------HHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEECTTSGGGS
T ss_pred CCccHHHHHHHHHHCCCcEEEEeCCh------------HHHHHHHHHHcCCCcccEEeeeEEEcCCCcEecCCCCCcccC
Confidence 68999999999999999999999953 23456778888884 3322 2322211 1
Q ss_pred CCCchhHHHHHHHHhcCCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCccC
Q psy4598 119 RKPVPGMWEYLSQEKNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFFT 182 (369)
Q Consensus 119 rKP~~gm~~~~~~~~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~~ 182 (369)
.||+|.+++.+++++ ++ ++++||||+. .|+.+|+++|+ ++.
T Consensus 155 ~~~Kp~~~~~~~~~~----~~--~~~~~vGDs~----------------~Di~~a~~ag~-~i~ 195 (225)
T 1nnl_A 155 SGGKGKVIKLLKEKF----HF--KKIIMIGDGA----------------TDMEACPPADA-FIG 195 (225)
T ss_dssp TTHHHHHHHHHHHHH----CC--SCEEEEESSH----------------HHHTTTTTSSE-EEE
T ss_pred CCchHHHHHHHHHHc----CC--CcEEEEeCcH----------------HhHHHHHhCCe-EEE
Confidence 467888999999886 44 7899999999 89999999999 643
No 88
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=99.35 E-value=5.8e-13 Score=131.78 Aligned_cols=95 Identities=16% Similarity=0.152 Sum_probs=77.7
Q ss_pred ccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHcCCC--eEEE-------Ee---cCCCCCCCCc
Q psy4598 55 LFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSLNVP--VQMF-------VA---TQYDRYRKPV 122 (369)
Q Consensus 55 ~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l~i~--~~~~-------~~---~~~~~~rKP~ 122 (369)
++||+.+.|+.|+++||+++|+||. +...+..+++.+|+. |... ++ .+....+||+
T Consensus 257 ~~pg~~e~l~~Lk~~G~~~~ivS~~------------~~~~~~~~~~~lgl~~~~~~~l~~~dg~~tg~~~~~v~~~kpk 324 (415)
T 3p96_A 257 LMPGARTTLRTLRRLGYACGVVSGG------------FRRIIEPLAEELMLDYVAANELEIVDGTLTGRVVGPIIDRAGK 324 (415)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEEE------------EHHHHHHHHHHTTCSEEEEECEEEETTEEEEEECSSCCCHHHH
T ss_pred cCccHHHHHHHHHHCCCEEEEEcCC------------cHHHHHHHHHHcCccceeeeeEEEeCCEEEeeEccCCCCCcch
Confidence 6899999999999999999999993 234566778889985 2211 11 1244568999
Q ss_pred hhHHHHHHHHhcCCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCcc
Q psy4598 123 PGMWEYLSQEKNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFF 181 (369)
Q Consensus 123 ~gm~~~~~~~~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~ 181 (369)
|.++..+++++ ++++++++||||+. +|+.+|.++|+.+.
T Consensus 325 ~~~~~~~~~~~----gi~~~~~i~vGD~~----------------~Di~~a~~aG~~va 363 (415)
T 3p96_A 325 ATALREFAQRA----GVPMAQTVAVGDGA----------------NDIDMLAAAGLGIA 363 (415)
T ss_dssp HHHHHHHHHHH----TCCGGGEEEEECSG----------------GGHHHHHHSSEEEE
T ss_pred HHHHHHHHHHc----CcChhhEEEEECCH----------------HHHHHHHHCCCeEE
Confidence 99999999986 78999999999999 89999999999874
No 89
>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A
Probab=99.34 E-value=1.8e-12 Score=120.32 Aligned_cols=95 Identities=9% Similarity=0.182 Sum_probs=79.1
Q ss_pred ccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHc---CC--CeEEEEecCCCCCCCCchhHHHHH
Q psy4598 55 LFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSL---NV--PVQMFVATQYDRYRKPVPGMWEYL 129 (369)
Q Consensus 55 ~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l---~i--~~~~~~~~~~~~~rKP~~gm~~~~ 129 (369)
++|++.+.|+.|+++|++++|+||.+. .....+++.+ |+ .|+.+++. +.. +||+|.+|+.+
T Consensus 131 ~~~g~~~~L~~L~~~g~~~~i~Tn~~~------------~~~~~~l~~~~~~~l~~~fd~i~~~-~~~-~KP~p~~~~~~ 196 (261)
T 1yns_A 131 FFADVVPAVRKWREAGMKVYIYSSGSV------------EAQKLLFGHSTEGDILELVDGHFDT-KIG-HKVESESYRKI 196 (261)
T ss_dssp CCTTHHHHHHHHHHTTCEEEEECSSCH------------HHHHHHHHTBTTBCCGGGCSEEECG-GGC-CTTCHHHHHHH
T ss_pred cCcCHHHHHHHHHhCCCeEEEEeCCCH------------HHHHHHHHhhcccChHhhccEEEec-CCC-CCCCHHHHHHH
Confidence 689999999999999999999999541 1234445543 45 47877777 667 99999999999
Q ss_pred HHHhcCCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCccCc
Q psy4598 130 SQEKNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFFTP 183 (369)
Q Consensus 130 ~~~~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~~p 183 (369)
++++ +++|++|+||||+. .|+.+|+++|++++..
T Consensus 197 ~~~l----g~~p~~~l~VgDs~----------------~di~aA~~aG~~~i~v 230 (261)
T 1yns_A 197 ADSI----GCSTNNILFLTDVT----------------REASAAEEADVHVAVV 230 (261)
T ss_dssp HHHH----TSCGGGEEEEESCH----------------HHHHHHHHTTCEEEEE
T ss_pred HHHh----CcCcccEEEEcCCH----------------HHHHHHHHCCCEEEEE
Confidence 9996 78999999999997 8999999999998643
No 90
>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A
Probab=99.34 E-value=1.2e-12 Score=115.76 Aligned_cols=94 Identities=11% Similarity=0.090 Sum_probs=76.0
Q ss_pred ccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHcCCC--e-EEEEecCCCCC--C-CCchhHHHH
Q psy4598 55 LFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSLNVP--V-QMFVATQYDRY--R-KPVPGMWEY 128 (369)
Q Consensus 55 ~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l~i~--~-~~~~~~~~~~~--r-KP~~gm~~~ 128 (369)
++|++.+.|+.|+++ ++++|+||.+ ...+..+++.+|+. | +.+++..+..+ + ||+|.++..
T Consensus 70 ~~~g~~~~l~~l~~~-~~~~i~s~~~------------~~~~~~~l~~~gl~~~f~~~~~~~~~~~~~~~~~p~p~~~~~ 136 (206)
T 1rku_A 70 PLEGAVEFVDWLRER-FQVVILSDTF------------YEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQ 136 (206)
T ss_dssp CCTTHHHHHHHHHTT-SEEEEEEEEE------------HHHHHHHHHHTTCCCEEEEEEEECTTSCEEEEECCSSSHHHH
T ss_pred CCccHHHHHHHHHhc-CcEEEEECCh------------HHHHHHHHHHcCCcceecceeEEcCCceEEeeecCCCchHHH
Confidence 589999999999999 9999999943 23456778888885 5 34555444322 2 599999999
Q ss_pred HHHHhcCCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCcc
Q psy4598 129 LSQEKNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFF 181 (369)
Q Consensus 129 ~~~~~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~ 181 (369)
+++++ ++++++++||||+. +|+.+|+++|+.+.
T Consensus 137 ~l~~l----~~~~~~~~~iGD~~----------------~Di~~a~~aG~~~~ 169 (206)
T 1rku_A 137 SVIAF----KSLYYRVIAAGDSY----------------NDTTMLSEAHAGIL 169 (206)
T ss_dssp HHHHH----HHTTCEEEEEECSS----------------TTHHHHHHSSEEEE
T ss_pred HHHHH----HhcCCEEEEEeCCh----------------hhHHHHHhcCccEE
Confidence 99986 67899999999998 89999999999864
No 91
>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}
Probab=99.34 E-value=6e-13 Score=119.74 Aligned_cols=97 Identities=13% Similarity=0.098 Sum_probs=76.1
Q ss_pred ccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHcCCC--eE-EEEec---------CCCCCCCCc
Q psy4598 55 LFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSLNVP--VQ-MFVAT---------QYDRYRKPV 122 (369)
Q Consensus 55 ~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l~i~--~~-~~~~~---------~~~~~rKP~ 122 (369)
++||+.+.|+.|+++|++++|+||.. ...++.+++.+|+. +. .+... ....+.+|+
T Consensus 93 ~~~g~~~~l~~l~~~g~~~~ivS~~~------------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~K 160 (232)
T 3fvv_A 93 LTVQAVDVVRGHLAAGDLCALVTATN------------SFVTAPIARAFGVQHLIATDPEYRDGRYTGRIEGTPSFREGK 160 (232)
T ss_dssp CCHHHHHHHHHHHHTTCEEEEEESSC------------HHHHHHHHHHTTCCEEEECEEEEETTEEEEEEESSCSSTHHH
T ss_pred cCHHHHHHHHHHHHCCCEEEEEeCCC------------HHHHHHHHHHcCCCEEEEcceEEECCEEeeeecCCCCcchHH
Confidence 58999999999999999999999932 34566778888985 21 11110 133456788
Q ss_pred hhHHHHHHHHhcCCcc---ccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCc-cCc
Q psy4598 123 PGMWEYLSQEKNGDLA---IDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAF-FTP 183 (369)
Q Consensus 123 ~gm~~~~~~~~~~~~~---i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f-~~p 183 (369)
+..++.+++++ + +++++|+||||+. +|+.+|.++|+.+ +.|
T Consensus 161 ~~~~~~~~~~~----~~~~~~~~~~~~vGDs~----------------~D~~~~~~ag~~~~~~~ 205 (232)
T 3fvv_A 161 VVRVNQWLAGM----GLALGDFAESYFYSDSV----------------NDVPLLEAVTRPIAANP 205 (232)
T ss_dssp HHHHHHHHHHT----TCCGGGSSEEEEEECCG----------------GGHHHHHHSSEEEEESC
T ss_pred HHHHHHHHHHc----CCCcCchhheEEEeCCH----------------hhHHHHHhCCCeEEECc
Confidence 88899999875 7 8999999999999 8999999999998 344
No 92
>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22
Probab=99.34 E-value=1.4e-12 Score=120.90 Aligned_cols=91 Identities=8% Similarity=0.143 Sum_probs=68.6
Q ss_pred ccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHc--C---------C--CeEEEEecCCCCCCCC
Q psy4598 55 LFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSL--N---------V--PVQMFVATQYDRYRKP 121 (369)
Q Consensus 55 ~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l--~---------i--~~~~~~~~~~~~~rKP 121 (369)
++||+.+.|++ |++++|+||.+ ...+..+++.+ | + .|+.++... ....||
T Consensus 126 ~~pgv~e~L~~----g~~l~i~Tn~~------------~~~~~~~l~~~~~g~~~~~~~l~l~~~~~~~f~~~-~~g~KP 188 (253)
T 2g80_A 126 VYADAIDFIKR----KKRVFIYSSGS------------VKAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDIN-TSGKKT 188 (253)
T ss_dssp CCHHHHHHHHH----CSCEEEECSSC------------HHHHHHHHHSBCCTTCTTSCCBCCGGGCCEEECHH-HHCCTT
T ss_pred CCCCHHHHHHc----CCEEEEEeCCC------------HHHHHHHHHhhcccccccccccchHhhcceEEeee-ccCCCC
Confidence 46888888887 99999999953 12334455554 3 3 144444332 102599
Q ss_pred chhHHHHHHHHhcCCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCccC
Q psy4598 122 VPGMWEYLSQEKNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFFT 182 (369)
Q Consensus 122 ~~gm~~~~~~~~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~~ 182 (369)
+|.+|..+++++ +++|++|+||||+. .|+++|+++||+++.
T Consensus 189 ~p~~~~~a~~~l----g~~p~~~l~vgDs~----------------~di~aA~~aG~~~i~ 229 (253)
T 2g80_A 189 ETQSYANILRDI----GAKASEVLFLSDNP----------------LELDAAAGVGIATGL 229 (253)
T ss_dssp CHHHHHHHHHHH----TCCGGGEEEEESCH----------------HHHHHHHTTTCEEEE
T ss_pred CHHHHHHHHHHc----CCCcccEEEEcCCH----------------HHHHHHHHcCCEEEE
Confidence 999999999996 79999999999999 899999999999864
No 93
>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A
Probab=99.34 E-value=4e-12 Score=117.52 Aligned_cols=47 Identities=19% Similarity=0.128 Sum_probs=42.6
Q ss_pred CCCCCchhHHHHHHHHhcCCccccCCccEEeeCc-cccccccCCCCCCCCCcccHHHHHhCCCCccCc
Q psy4598 117 RYRKPVPGMWEYLSQEKNGDLAIDISQSFYAGDA-AGRAANWAPKKKKDFACTDHLFAFNLNLAFFTP 183 (369)
Q Consensus 117 ~~rKP~~gm~~~~~~~~~~~~~i~~~~s~~VGD~-~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~~p 183 (369)
..+||+|.+++.+++++ ++++++++||||+ . +|+.+|+++|++++..
T Consensus 179 ~~~Kp~~~~~~~~~~~~----~~~~~~~~~vGD~~~----------------~Di~~a~~aG~~~~~v 226 (264)
T 3epr_A 179 FIGKPNAIIMNKALEIL----NIPRNQAVMVGDNYL----------------TDIMAGINNDIDTLLV 226 (264)
T ss_dssp ECSTTSHHHHHHHHHHH----TSCGGGEEEEESCTT----------------THHHHHHHHTCEEEEE
T ss_pred cCCCCCHHHHHHHHHHh----CcCcccEEEECCCcH----------------HHHHHHHHCCCeEEEE
Confidence 45899999999999996 7999999999999 6 8999999999998654
No 94
>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*
Probab=99.32 E-value=8.5e-12 Score=118.03 Aligned_cols=48 Identities=19% Similarity=0.243 Sum_probs=41.7
Q ss_pred CCceEEEEecCCceeecCCCCCCCCCccccccccccHHHHHHHHHHCCcEEEEEecCCCcC
Q psy4598 23 NSAKIASFDLDGTLITTKSGKVFPVDTHDWKLLFSNIESVLKQYLDDGYKLVIFTNQGAIG 83 (369)
Q Consensus 23 ~~~k~~~fDlDgTLi~~~sg~~~~~~~~d~~~~~p~v~~~L~~L~~~G~~i~i~TNq~gi~ 83 (369)
.+.|+++||+||||+... .++|++.++|++|+++|++++++||++|..
T Consensus 19 ~~~k~i~~D~DGTL~~~~-------------~~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~ 66 (306)
T 2oyc_A 19 GRAQGVLFDCDGVLWNGE-------------RAVPGAPELLERLARAGKAALFVSNNSRRA 66 (306)
T ss_dssp HHCSEEEECSBTTTEETT-------------EECTTHHHHHHHHHHTTCEEEEEECCCSSC
T ss_pred hhCCEEEECCCCcEecCC-------------ccCcCHHHHHHHHHHCCCeEEEEECCCCCC
Confidence 356899999999999642 268999999999999999999999998765
No 95
>3t61_A Gluconokinase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium, nysgrc; 2.20A {Sinorhizobium meliloti}
Probab=99.32 E-value=4.6e-12 Score=112.63 Aligned_cols=95 Identities=21% Similarity=0.248 Sum_probs=76.4
Q ss_pred ccEEEEEEcCCCCcHHHHHHHHhccCCcEEEeCCcchh-----------------HHHHHHHHHHHHhCCCcEEEeCCCC
Q psy4598 271 LDSVLIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTLGS-----------------WQKCVSVMKAALDSGLSVVVDNTNP 333 (369)
Q Consensus 271 ~~~lIll~G~pGSGKSTla~~L~~~~~~~~i~~D~~~~-----------------~~~~~~~~~~~l~~g~~vIiD~tn~ 333 (369)
++.+|+|+|+|||||||+++.|++.+++.+++.|.+.. .......+...+..|..||+|.++.
T Consensus 17 ~~~~I~l~G~~GsGKSTla~~L~~~lg~~~i~~d~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~vivd~~~~ 96 (202)
T 3t61_A 17 FPGSIVVMGVSGSGKSSVGEAIAEACGYPFIEGDALHPPENIRKMSEGIPLTDDDRWPWLAAIGERLASREPVVVSCSAL 96 (202)
T ss_dssp CSSCEEEECSTTSCHHHHHHHHHHHHTCCEEEGGGGCCHHHHHHHHHTCCCCHHHHHHHHHHHHHHHTSSSCCEEECCCC
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHhCCEEEeCCcCcchhhHHHHhcCCCCCchhhHHHHHHHHHHHhcCCCEEEECCCC
Confidence 45789999999999999999999999999999998731 1122344555567888999999998
Q ss_pred CHHHHHHHHHHHHhcCCeEEEEEEeCCHHHHHHHc
Q psy4598 334 DKESRHRYIEAAKQHGVRCIAVHMNISKEHAKHNI 368 (369)
Q Consensus 334 ~~~~r~~~~~la~~~~~~v~~v~l~~~~e~~~~Rn 368 (369)
....+..+..++ +.++.+|++++|.+++.+|.
T Consensus 97 ~~~~~~~l~~~~---~~~~~vi~l~~~~e~~~~Rl 128 (202)
T 3t61_A 97 KRSYRDKLRESA---PGGLAFVFLHGSESVLAERM 128 (202)
T ss_dssp SHHHHHHHHHTS---TTCCEEEEEECCHHHHHHHH
T ss_pred CHHHHHHHHHhc---CCCeEEEEEeCCHHHHHHHH
Confidence 888877775543 55678999999999999884
No 96
>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}
Probab=99.31 E-value=2.5e-12 Score=113.31 Aligned_cols=95 Identities=14% Similarity=0.104 Sum_probs=71.5
Q ss_pred ccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHcCCC----eE--EEEecCC----CCCCCCchh
Q psy4598 55 LFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSLNVP----VQ--MFVATQY----DRYRKPVPG 124 (369)
Q Consensus 55 ~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l~i~----~~--~~~~~~~----~~~rKP~~g 124 (369)
++|++.+.|+.|+++|++++|+||.. ...+..+++.+|++ |. +.++.+. ....||+++
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~s~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (219)
T 3kd3_A 83 LTDGIKELVQDLKNKGFEIWIFSGGL------------SESIQPFADYLNIPRENIFAVETIWNSDGSFKELDNSNGACD 150 (219)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEEEE------------HHHHHHHHHHHTCCGGGEEEEEEEECTTSBEEEEECTTSTTT
T ss_pred CChhHHHHHHHHHHCCCeEEEEcCCc------------HHHHHHHHHHcCCCcccEEEeeeeecCCCceeccCCCCCCcc
Confidence 68999999999999999999999942 23455667888874 22 2222222 246899888
Q ss_pred HHHHHHHHhcCCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCcc
Q psy4598 125 MWEYLSQEKNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFF 181 (369)
Q Consensus 125 m~~~~~~~~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~ 181 (369)
....++.+. +++++++++||||+. +|+.+| ++|+.++
T Consensus 151 ~~~~~l~~~---~~~~~~~~~~vGD~~----------------~Di~~~-~~G~~~~ 187 (219)
T 3kd3_A 151 SKLSAFDKA---KGLIDGEVIAIGDGY----------------TDYQLY-EKGYATK 187 (219)
T ss_dssp CHHHHHHHH---GGGCCSEEEEEESSH----------------HHHHHH-HHTSCSE
T ss_pred cHHHHHHHH---hCCCCCCEEEEECCH----------------hHHHHH-hCCCCcE
Confidence 777666554 378999999999999 899998 6898853
No 97
>1qhx_A CPT, protein (chloramphenicol phosphotransferase); kinase, antibiotic resistance, phosphorylation, mononucleoti binding fold; HET: ATP; 2.50A {Streptomyces venezuelae} SCOP: c.37.1.3 PDB: 1grr_A* 1grq_A 1qhs_A* 1qhn_A* 1qhy_A*
Probab=99.31 E-value=1e-11 Score=107.71 Aligned_cols=96 Identities=16% Similarity=0.201 Sum_probs=71.0
Q ss_pred ccEEEEEEcCCCCcHHHHHHHHhccCCc--EEEeCCcch--------------------------hHHH----HHHHHHH
Q psy4598 271 LDSVLIMIGSQGSGKSSFVSTYLKPLNY--TTVNRDTLG--------------------------SWQK----CVSVMKA 318 (369)
Q Consensus 271 ~~~lIll~G~pGSGKSTla~~L~~~~~~--~~i~~D~~~--------------------------~~~~----~~~~~~~ 318 (369)
|+.+|+|+|+|||||||+++.|++.++. ..++.|.+. .++. +...+..
T Consensus 2 ~~~~i~l~G~~GsGKST~a~~La~~l~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (178)
T 1qhx_A 2 TTRMIILNGGSSAGKSGIVRCLQSVLPEPWLAFGVDSLIEAMPLKMQSAEGGIEFDADGGVSIGPEFRALEGAWAEGVVA 81 (178)
T ss_dssp CCCEEEEECCTTSSHHHHHHHHHHHSSSCEEEEEHHHHHHHSCGGGGTSTTSEEECTTSCEEECHHHHHHHHHHHHHHHH
T ss_pred CceEEEEECCCCCCHHHHHHHHHHhcCCCeEEeccchHhhhcchhhccchhhccccCCCccccchhHHHHHHHHHHHHHH
Confidence 3578999999999999999999998754 445566431 1122 2333566
Q ss_pred HHhCCCcEEEeCCCC-CHHHHHHHHHHHHhcCCeEEEEEEeCCHHHHHHHc
Q psy4598 319 ALDSGLSVVVDNTNP-DKESRHRYIEAAKQHGVRCIAVHMNISKEHAKHNI 368 (369)
Q Consensus 319 ~l~~g~~vIiD~tn~-~~~~r~~~~~la~~~~~~v~~v~l~~~~e~~~~Rn 368 (369)
.++.|.+||+|.++. ....+..+++.++ +..+.+|++++|.+++.+|.
T Consensus 82 ~~~~g~~vi~~~~~~~~~~~~~~~~~~~~--~~~~~~v~l~~~~e~l~~R~ 130 (178)
T 1qhx_A 82 MARAGARIIIDDVFLGGAAAQERWRSFVG--DLDVLWVGVRCDGAVAEGRE 130 (178)
T ss_dssp HHHTTCEEEEEECCTTTHHHHHHHHHHHT--TCCEEEEEEECCHHHHHHHH
T ss_pred HHhcCCeEEEEeccccChHHHHHHHHHhc--CCcEEEEEEECCHHHHHHHH
Confidence 677888999999886 4555777777664 45678899999999999985
No 98
>3nvb_A Uncharacterized protein; protein FKBH, protein fkbhstructural genomics, PSI-2, protei structure initiative; 1.71A {Bacteroides fragilis} PDB: 3slr_A
Probab=99.31 E-value=5.4e-12 Score=123.24 Aligned_cols=122 Identities=12% Similarity=0.129 Sum_probs=90.6
Q ss_pred CCCceEEEEecCCceeecC---CCCCCCCCcccc--ccccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHH
Q psy4598 22 CNSAKIASFDLDGTLITTK---SGKVFPVDTHDW--KLLFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKA 96 (369)
Q Consensus 22 ~~~~k~~~fDlDgTLi~~~---sg~~~~~~~~d~--~~~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i 96 (369)
....|.++||+||||+.-. .|.....-.+.. -.+||++.+.|+.|+++|++++|+||.+ ...+
T Consensus 219 ~~~iK~lv~DvDnTL~~G~l~~dG~~~~~~~dg~g~g~~ypgv~e~L~~Lk~~Gi~laI~Snn~------------~~~v 286 (387)
T 3nvb_A 219 GKFKKCLILDLDNTIWGGVVGDDGWENIQVGHGLGIGKAFTEFQEWVKKLKNRGIIIAVCSKNN------------EGKA 286 (387)
T ss_dssp TCCCCEEEECCBTTTBBSCHHHHCGGGSBCSSSSSTHHHHHHHHHHHHHHHHTTCEEEEEEESC------------HHHH
T ss_pred hCCCcEEEEcCCCCCCCCeecCCCceeEEeccCccccccCHHHHHHHHHHHHCCCEEEEEcCCC------------HHHH
Confidence 3567999999999998632 121111111111 2369999999999999999999999953 2345
Q ss_pred HHHHHH-----cCC-C-eEEEEecCCCCCCCCchhHHHHHHHHhcCCccccCCccEEeeCccccccccCCCCCCCCCccc
Q psy4598 97 EKIIKS-----LNV-P-VQMFVATQYDRYRKPVPGMWEYLSQEKNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTD 169 (369)
Q Consensus 97 ~~~l~~-----l~i-~-~~~~~~~~~~~~rKP~~gm~~~~~~~~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D 169 (369)
+.+++. +++ . +.++. ..||+|.++..+++++ ++++++++||||+. .|
T Consensus 287 ~~~l~~~~~~~l~l~~~~~v~~------~~KPKp~~l~~al~~L----gl~pee~v~VGDs~----------------~D 340 (387)
T 3nvb_A 287 KEPFERNPEMVLKLDDIAVFVA------NWENKADNIRTIQRTL----NIGFDSMVFLDDNP----------------FE 340 (387)
T ss_dssp HHHHHHCTTCSSCGGGCSEEEE------ESSCHHHHHHHHHHHH----TCCGGGEEEECSCH----------------HH
T ss_pred HHHHhhccccccCccCccEEEe------CCCCcHHHHHHHHHHh----CcCcccEEEECCCH----------------HH
Confidence 555655 232 1 23332 5899999999999996 79999999999999 89
Q ss_pred HHHHHhC--CCCcc
Q psy4598 170 HLFAFNL--NLAFF 181 (369)
Q Consensus 170 ~~~A~n~--Gi~f~ 181 (369)
+..|+++ ||.++
T Consensus 341 i~aaraalpgV~vi 354 (387)
T 3nvb_A 341 RNMVREHVPGVTVP 354 (387)
T ss_dssp HHHHHHHSTTCBCC
T ss_pred HHHHHhcCCCeEEE
Confidence 9999999 88875
No 99
>2vli_A Antibiotic resistance protein; transferase, tunicamycin, phosphotransferase; 1.95A {Deinococcus radiodurans}
Probab=99.30 E-value=7.5e-12 Score=108.95 Aligned_cols=98 Identities=14% Similarity=0.219 Sum_probs=72.0
Q ss_pred ccEEEEEEcCCCCcHHHHHHHHhccCCcEEE-eCCcc----h--------------hH-HHHHHHHHHHHhC-CCcEEEe
Q psy4598 271 LDSVLIMIGSQGSGKSSFVSTYLKPLNYTTV-NRDTL----G--------------SW-QKCVSVMKAALDS-GLSVVVD 329 (369)
Q Consensus 271 ~~~lIll~G~pGSGKSTla~~L~~~~~~~~i-~~D~~----~--------------~~-~~~~~~~~~~l~~-g~~vIiD 329 (369)
.+.+|+|+|+|||||||+++.|++.++..++ +.|.+ + .+ +.+.+.+...++. |..||+|
T Consensus 4 ~~~~I~l~G~~GsGKST~a~~La~~l~~~~i~d~~~~g~~i~~~~~~g~~~~~~~~~~~~~~~~~i~~~l~~~g~~vi~d 83 (183)
T 2vli_A 4 RSPIIWINGPFGVGKTHTAHTLHERLPGSFVFEPEEMGQALRKLTPGFSGDPQEHPMWIPLMLDALQYASREAAGPLIVP 83 (183)
T ss_dssp -CCEEEEECCC----CHHHHHHHHHSTTCEECCTHHHHHHHHHTSTTCCSCGGGSTTHHHHHHHHHHHHHHHCSSCEEEE
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHhcCCCEEEchhhhHHHHHHhCccccchhhhhHHHHHHHHHHHHHHHHhCCCcEEEe
Confidence 4579999999999999999999999887777 42111 1 11 2234445555665 7789999
Q ss_pred CCCCCHHHHHHHHHHHHhcCCeEEEEEEeCCHHHHHHHc
Q psy4598 330 NTNPDKESRHRYIEAAKQHGVRCIAVHMNISKEHAKHNI 368 (369)
Q Consensus 330 ~tn~~~~~r~~~~~la~~~~~~v~~v~l~~~~e~~~~Rn 368 (369)
.++...+.+..+++.+++.+..+..|++++|.+++.+|.
T Consensus 84 ~~~~~~~~~~~~~~~l~~~~~~~~~i~l~~~~e~~~~R~ 122 (183)
T 2vli_A 84 VSISDTARHRRLMSGLKDRGLSVHHFTLIAPLNVVLERL 122 (183)
T ss_dssp ECCCCHHHHHHHHHHHHHTTCCCEEEEEECCHHHHHHHH
T ss_pred eeccCHHHHHHHHHHHHhcCCceEEEEEeCCHHHHHHHH
Confidence 999888888888888888887778899999999999884
No 100
>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}
Probab=99.29 E-value=5.4e-12 Score=114.94 Aligned_cols=92 Identities=10% Similarity=0.097 Sum_probs=74.2
Q ss_pred ccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHcCC--CeEEEEecCCCCCCCCchhHHHHHHHH
Q psy4598 55 LFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSLNV--PVQMFVATQYDRYRKPVPGMWEYLSQE 132 (369)
Q Consensus 55 ~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l~i--~~~~~~~~~~~~~rKP~~gm~~~~~~~ 132 (369)
++|++.+.|+.|+ .|++++|+||.. ...+...++.+|+ .|+.+++ ..||+|.++..++++
T Consensus 113 ~~~~~~~~l~~l~-~~~~~~i~t~~~------------~~~~~~~l~~~~l~~~f~~i~~-----~~kp~~~~~~~~~~~ 174 (251)
T 2pke_A 113 VIAGVREAVAAIA-ADYAVVLITKGD------------LFHQEQKIEQSGLSDLFPRIEV-----VSEKDPQTYARVLSE 174 (251)
T ss_dssp BCTTHHHHHHHHH-TTSEEEEEEESC------------HHHHHHHHHHHSGGGTCCCEEE-----ESCCSHHHHHHHHHH
T ss_pred cCccHHHHHHHHH-CCCEEEEEeCCC------------HHHHHHHHHHcCcHHhCceeee-----eCCCCHHHHHHHHHH
Confidence 5799999999999 999999999943 1233455666666 3665554 269999999999998
Q ss_pred hcCCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCccCc
Q psy4598 133 KNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFFTP 183 (369)
Q Consensus 133 ~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~~p 183 (369)
+ ++++++++||||+.. .|+.+|+++|+.++..
T Consensus 175 l----~~~~~~~i~iGD~~~---------------~Di~~a~~aG~~~~~v 206 (251)
T 2pke_A 175 F----DLPAERFVMIGNSLR---------------SDVEPVLAIGGWGIYT 206 (251)
T ss_dssp H----TCCGGGEEEEESCCC---------------CCCHHHHHTTCEEEEC
T ss_pred h----CcCchhEEEECCCch---------------hhHHHHHHCCCEEEEE
Confidence 6 799999999999972 6999999999998643
No 101
>2yvu_A Probable adenylyl-sulfate kinase; transferase, structural genomics, NPPSFA, national P protein structural and functional analyses; 2.10A {Aeropyrum pernix}
Probab=99.27 E-value=3e-11 Score=105.90 Aligned_cols=98 Identities=16% Similarity=0.253 Sum_probs=76.9
Q ss_pred ccEEEEEEcCCCCcHHHHHHHHhccCC-----cEEEeCCcchh----------------HHHHHHHHHHHHhCCCcEEEe
Q psy4598 271 LDSVLIMIGSQGSGKSSFVSTYLKPLN-----YTTVNRDTLGS----------------WQKCVSVMKAALDSGLSVVVD 329 (369)
Q Consensus 271 ~~~lIll~G~pGSGKSTla~~L~~~~~-----~~~i~~D~~~~----------------~~~~~~~~~~~l~~g~~vIiD 329 (369)
.+.+|+|+|+|||||||+++.|++.++ +.+++.|.++. +..+...+...+..|..||+|
T Consensus 12 ~~~~i~l~G~~GsGKsT~~~~L~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~g~~vi~d 91 (186)
T 2yvu_A 12 KGIVVWLTGLPGSGKTTIATRLADLLQKEGYRVEVLDGDWARTTVSEGAGFTREERLRHLKRIAWIARLLARNGVIVICS 91 (186)
T ss_dssp CCEEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEEHHHHHTTTTTTCCCCHHHHHHHHHHHHHHHHHHHTTTCEEEEE
T ss_pred CCcEEEEEcCCCCCHHHHHHHHHHHHHhcCCeEEEeeHHHHHHHHhhccCCChhhHHHHHHHHHHHHHHHHhCCCEEEEe
Confidence 457999999999999999999998753 56788776531 111222333445678888899
Q ss_pred CCCCCHHHHHHHHHHHHhcCCeEEEEEEeCCHHHHHHHc
Q psy4598 330 NTNPDKESRHRYIEAAKQHGVRCIAVHMNISKEHAKHNI 368 (369)
Q Consensus 330 ~tn~~~~~r~~~~~la~~~~~~v~~v~l~~~~e~~~~Rn 368 (369)
.++.....|..+.+++...+.+..+||+++|.+++.+|.
T Consensus 92 ~~~~~~~~r~~~~~~~~~~~~~~~~v~L~~~~e~~~~R~ 130 (186)
T 2yvu_A 92 FVSPYKQARNMVRRIVEEEGIPFLEIYVKASLEEVIRRD 130 (186)
T ss_dssp CCCCCHHHHHHHHHHHHHTTCCEEEEEEECCHHHHHHHC
T ss_pred CccccHHHHHHHHHHhhccCCCeEEEEEeCCHHHHHHhh
Confidence 998888888888888888888899999999999999884
No 102
>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}
Probab=99.26 E-value=9.8e-12 Score=108.20 Aligned_cols=115 Identities=12% Similarity=0.120 Sum_probs=84.2
Q ss_pred CCceEEEEecCCceeecCCCCCCCCCccccccccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHH-
Q psy4598 23 NSAKIASFDLDGTLITTKSGKVFPVDTHDWKLLFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIK- 101 (369)
Q Consensus 23 ~~~k~~~fDlDgTLi~~~sg~~~~~~~~d~~~~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~- 101 (369)
...|.++||+||||.... ..+......+..+.-.=...|+.|+++|++++|+||. . .+..+++
T Consensus 7 ~~ikliv~D~DGtL~d~~--~~~~~~g~~~~~f~~~D~~~L~~Lk~~Gi~~~I~Tg~-~-------------~~~~~l~~ 70 (168)
T 3ewi_A 7 KEIKLLVCNIDGCLTNGH--IYVSGDQKEIISYDVKDAIGISLLKKSGIEVRLISER-A-------------CSKQTLSA 70 (168)
T ss_dssp CCCCEEEEECCCCCSCSC--CBCCSSCCCEEEEEHHHHHHHHHHHHTTCEEEEECSS-C-------------CCHHHHHT
T ss_pred hcCcEEEEeCccceECCc--EEEcCCCCEEEEEecCcHHHHHHHHHCCCEEEEEeCc-H-------------HHHHHHHH
Confidence 457899999999998643 2333333333332211224799999999999999994 1 1244567
Q ss_pred -HcCCCeEEEEecCCCCCCCCchhHHHHHHHHhcCCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCc
Q psy4598 102 -SLNVPVQMFVATQYDRYRKPVPGMWEYLSQEKNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAF 180 (369)
Q Consensus 102 -~l~i~~~~~~~~~~~~~rKP~~gm~~~~~~~~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f 180 (369)
.+++. ++.+ .+|++.++..+++++ ++++++++||||+. .|+.++.++|+.+
T Consensus 71 l~lgi~--~~~g------~~~K~~~l~~~~~~~----gi~~~~~~~vGD~~----------------nDi~~~~~ag~~~ 122 (168)
T 3ewi_A 71 LKLDCK--TEVS------VSDKLATVDEWRKEM----GLCWKEVAYLGNEV----------------SDEECLKRVGLSA 122 (168)
T ss_dssp TCCCCC--EECS------CSCHHHHHHHHHHHT----TCCGGGEEEECCSG----------------GGHHHHHHSSEEE
T ss_pred hCCCcE--EEEC------CCChHHHHHHHHHHc----CcChHHEEEEeCCH----------------hHHHHHHHCCCEE
Confidence 55654 3322 368899999999986 79999999999999 8999999999997
Q ss_pred c
Q psy4598 181 F 181 (369)
Q Consensus 181 ~ 181 (369)
.
T Consensus 123 a 123 (168)
T 3ewi_A 123 V 123 (168)
T ss_dssp E
T ss_pred E
Confidence 5
No 103
>2axn_A 6-phosphofructo-2-kinase/fructose-2,6- biphosphatase 3 (6PF-2-K/FRU- 2,6-P2ASE brain/placenta-type...; bifunctional enzyme, EDTA complex; HET: F6P EDT ADP; 2.10A {Homo sapiens} PDB: 2dwo_A* 2dwp_A* 2i1v_B* 3qpu_A* 3qpv_A* 3qpw_A*
Probab=99.26 E-value=1.7e-11 Score=124.89 Aligned_cols=98 Identities=21% Similarity=0.332 Sum_probs=75.0
Q ss_pred cccEEEEEEcCCCCcHHHHHHHHhccC-----CcEEEeCCcchh-------------------H---HHH----HHHHHH
Q psy4598 270 ALDSVLIMIGSQGSGKSSFVSTYLKPL-----NYTTVNRDTLGS-------------------W---QKC----VSVMKA 318 (369)
Q Consensus 270 ~~~~lIll~G~pGSGKSTla~~L~~~~-----~~~~i~~D~~~~-------------------~---~~~----~~~~~~ 318 (369)
.++.+|+|+|+|||||||+|++|++.+ +..+++.|+++. + +.+ ...+..
T Consensus 33 ~~~~lIvlvGlpGSGKSTia~~La~~L~~~~~d~~v~s~D~~r~~~~~~~~~~~~f~~~~~~~~~~re~~~~~~l~~~~~ 112 (520)
T 2axn_A 33 NSPTVIVMVGLPARGKTYISKKLTRYLNWIGVPTKVFNVGEYRREAVKQYSSYNFFRPDNEEAMKVRKQCALAALRDVKS 112 (520)
T ss_dssp CCCEEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEEHHHHHHHHHSCCCCGGGGCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHHHhhcCCCeEEecccHHHHHhccCCccccccCcccHHHHHHHHHHHHHHHHHHHH
Confidence 456899999999999999999999875 455677776531 1 111 122223
Q ss_pred HH--hCCCcEEEeCCCCCHHHHHHHHHHHHhcCCeEEEEEEeCCH-HHHHHH
Q psy4598 319 AL--DSGLSVVVDNTNPDKESRHRYIEAAKQHGVRCIAVHMNISK-EHAKHN 367 (369)
Q Consensus 319 ~l--~~g~~vIiD~tn~~~~~r~~~~~la~~~~~~v~~v~l~~~~-e~~~~R 367 (369)
.+ +.|..||+|+||.....|..++++++++++.+.++++.|+. +++.+|
T Consensus 113 ~L~~~~g~~VIvDat~~~~~~R~~~~~~a~~~g~~v~~l~~~~~d~e~i~~r 164 (520)
T 2axn_A 113 YLAKEGGQIAVFDATNTTRERRHMILHFAKENDFKAFFIESVCDDPTVVASN 164 (520)
T ss_dssp HHHHSCCCEEEEESCCCSHHHHHHHHHHHHHHTCEEEEEEEECCCHHHHHHH
T ss_pred HHHhcCCceEEecCCCCCHHHHHHHHHHHHHcCCeEEEEEEeCChHHHHHHH
Confidence 33 56889999999999999999999999999999999999984 444443
No 104
>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0
Probab=99.25 E-value=4e-11 Score=110.58 Aligned_cols=48 Identities=13% Similarity=-0.007 Sum_probs=42.8
Q ss_pred CCCCCCchhHHHHHHHHhcCCccccCCccEEeeCc-cccccccCCCCCCCCCcccHHHHHhCCCCccCc
Q psy4598 116 DRYRKPVPGMWEYLSQEKNGDLAIDISQSFYAGDA-AGRAANWAPKKKKDFACTDHLFAFNLNLAFFTP 183 (369)
Q Consensus 116 ~~~rKP~~gm~~~~~~~~~~~~~i~~~~s~~VGD~-~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~~p 183 (369)
...+||+|.+++.+++++ ++++++++||||+ . +|+.+|+++|++++..
T Consensus 183 ~~~~kp~~~~~~~~~~~~----~~~~~~~~~vGD~~~----------------~Di~~~~~~g~~~~~v 231 (268)
T 3qgm_A 183 VVVGKPSEVIMREALDIL----GLDAKDVAVVGDQID----------------VDVAAGKAIGAETVLV 231 (268)
T ss_dssp EECSTTSHHHHHHHHHHH----TCCGGGEEEEESCTT----------------THHHHHHHHTCEEEEE
T ss_pred eecCCCCHHHHHHHHHHh----CCCchhEEEECCCch----------------HHHHHHHHCCCcEEEE
Confidence 346999999999999996 7999999999999 5 8999999999988644
No 105
>1qf9_A UMP/CMP kinase, protein (uridylmonophosphate/cytidylmonophosphate kinase); nucleoside monophosphate kinase, NMP kinase; HET: ADP C5P; 1.70A {Dictyostelium discoideum} SCOP: c.37.1.1 PDB: 1uke_A* 2ukd_A* 3ukd_A* 4ukd_A* 5ukd_A*
Probab=99.25 E-value=4.7e-11 Score=104.36 Aligned_cols=102 Identities=19% Similarity=0.324 Sum_probs=75.0
Q ss_pred ccccccEEEEEEcCCCCcHHHHHHHHhccCCcEEEeCCcchhH------------------------HHHHHHHHHHHh-
Q psy4598 267 MKAALDSVLIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTLGSW------------------------QKCVSVMKAALD- 321 (369)
Q Consensus 267 ~~~~~~~lIll~G~pGSGKSTla~~L~~~~~~~~i~~D~~~~~------------------------~~~~~~~~~~l~- 321 (369)
|...|+.+|+|+|+|||||||+++.|++.+++.+++.|.+... ......+.+.+.
T Consensus 1 m~~~~~~~I~l~G~~GsGKsT~~~~L~~~l~~~~i~~d~~~~~~~~~~~~~~~~i~~~~~~g~~~~~~~~~~~l~~~i~~ 80 (194)
T 1qf9_A 1 MEKSKPNVVFVLGGPGSGKGTQCANIVRDFGWVHLSAGDLLRQEQQSGSKDGEMIATMIKNGEIVPSIVTVKLLKNAIDA 80 (194)
T ss_dssp CCCCCCEEEEEEESTTSSHHHHHHHHHHHHCCEEEEHHHHHHHHHHTTCTTHHHHHHHHHTTCCCCHHHHHHHHHHHHHT
T ss_pred CCCCcCcEEEEECCCCCCHHHHHHHHHHHhCCeEeeHHHHHHHHHhcCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHh
Confidence 3456788999999999999999999999999999999775210 011222233332
Q ss_pred -CCCcEEEeCCCCCHHHHHHHHHHHHhcCCeEEEEEEeCCHHHHHHHc
Q psy4598 322 -SGLSVVVDNTNPDKESRHRYIEAAKQHGVRCIAVHMNISKEHAKHNI 368 (369)
Q Consensus 322 -~g~~vIiD~tn~~~~~r~~~~~la~~~~~~v~~v~l~~~~e~~~~Rn 368 (369)
.+..||+|+.......+..+...+.....+-.+|++++|.+++.+|.
T Consensus 81 ~~~~~vi~d~~~~~~~~~~~~~~~~~~~~~~~~vi~l~~~~e~~~~R~ 128 (194)
T 1qf9_A 81 NQGKNFLVDGFPRNEENNNSWEENMKDFVDTKFVLFFDCPEEVMTQRL 128 (194)
T ss_dssp STTCCEEEETCCCSHHHHHHHHHHHTTTCEEEEEEEEECCHHHHHHHH
T ss_pred cCCCCEEEeCcCCCHHHHHHHHHHHhccCCCCEEEEEECCHHHHHHHH
Confidence 46789999988887777777666554323446899999999999884
No 106
>1knq_A Gluconate kinase; ALFA/beta structure, transferase; 2.00A {Escherichia coli} SCOP: c.37.1.17 PDB: 1ko1_A 1ko4_A 1ko5_A* 1ko8_A* 1kof_A*
Probab=99.24 E-value=5.7e-11 Score=102.86 Aligned_cols=93 Identities=15% Similarity=0.154 Sum_probs=71.5
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhccCCcEEEeCCcchh---------------------HHHHHHHHHHHHhCCCcEEEeC
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTLGS---------------------WQKCVSVMKAALDSGLSVVVDN 330 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~~~~~~i~~D~~~~---------------------~~~~~~~~~~~l~~g~~vIiD~ 330 (369)
..+|+|+|+|||||||+++.|+..++..+++.|.+.. +..+...+...+..+..+|+|.
T Consensus 8 g~~i~l~G~~GsGKSTl~~~l~~~~g~~~i~~d~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~ 87 (175)
T 1knq_A 8 HHIYVLMGVSGSGKSAVASEVAHQLHAAFLDGDFLHPRRNIEKMASGEPLNDDDRKPWLQALNDAAFAMQRTNKVSLIVC 87 (175)
T ss_dssp SEEEEEECSTTSCHHHHHHHHHHHHTCEEEEGGGGCCHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHCSEEEEEC
T ss_pred CcEEEEEcCCCCCHHHHHHHHHHhhCcEEEeCccccchHHHHHhhcCcCCCccccccHHHHHHHHHHHHHhcCCcEEEEe
Confidence 4789999999999999999999988999999998631 1112233444555688999999
Q ss_pred CCCCHHHHHHHHHHHHhcCCeEEEEEEeCCHHHHHHHc
Q psy4598 331 TNPDKESRHRYIEAAKQHGVRCIAVHMNISKEHAKHNI 368 (369)
Q Consensus 331 tn~~~~~r~~~~~la~~~~~~v~~v~l~~~~e~~~~Rn 368 (369)
+++.+..+.. +++.+..+.+|++++|.+++.+|.
T Consensus 88 ~~~~~~~~~~----l~~~~~~~~vv~l~~~~e~~~~R~ 121 (175)
T 1knq_A 88 SALKKHYRDL----LREGNPNLSFIYLKGDFDVIESRL 121 (175)
T ss_dssp CCCSHHHHHH----HHTTCTTEEEEEEECCHHHHHHHH
T ss_pred CchHHHHHHH----HHhcCCCEEEEEEECCHHHHHHHH
Confidence 8876655544 344556778999999999999984
No 107
>1m7g_A Adenylylsulfate kinase; APS kinase, transferase, sulfate Met nucleotide 2 kinase; HET: AV2 ADX ADP; 1.43A {Penicillium chrysogenum} SCOP: c.37.1.4 PDB: 1d6j_A* 1m7h_A* 3cr7_A*
Probab=99.24 E-value=3.3e-11 Score=108.03 Aligned_cols=100 Identities=17% Similarity=0.206 Sum_probs=77.7
Q ss_pred ccccEEEEEEcCCCCcHHHHHHHHhccCC------cEEEeCCcchh----------------HHHHHHHHHHHHhCCCcE
Q psy4598 269 AALDSVLIMIGSQGSGKSSFVSTYLKPLN------YTTVNRDTLGS----------------WQKCVSVMKAALDSGLSV 326 (369)
Q Consensus 269 ~~~~~lIll~G~pGSGKSTla~~L~~~~~------~~~i~~D~~~~----------------~~~~~~~~~~~l~~g~~v 326 (369)
..++.+|+|+|+|||||||+++.|++.++ +.+++.|.++. ++.+...+..+++.|..|
T Consensus 22 ~~~~~~i~~~G~~GsGKsT~~~~l~~~l~~~~g~~~~~~~~d~~r~~l~~~~~~~~~~r~~~~~~~~~~~~~~l~~g~~V 101 (211)
T 1m7g_A 22 NQRGLTIWLTGLSASGKSTLAVELEHQLVRDRRVHAYRLDGDNIRFGLNKDLGFSEADRNENIRRIAEVAKLFADSNSIA 101 (211)
T ss_dssp TSSCEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCEEEECHHHHTTTTTTTCCSSHHHHHHHHHHHHHHHHHHHHTTCEE
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHhccccCCcEEEECChHHhhhhccccCCCHHHHHHHHHHHHHHHHHHHHCCCEE
Confidence 34568999999999999999999998765 88888776531 222333455667889999
Q ss_pred EEeCCCCCHHHHHHHHHHHH------hcCCeEEEEEEeCCHHHHHHHc
Q psy4598 327 VVDNTNPDKESRHRYIEAAK------QHGVRCIAVHMNISKEHAKHNI 368 (369)
Q Consensus 327 IiD~tn~~~~~r~~~~~la~------~~~~~v~~v~l~~~~e~~~~Rn 368 (369)
|+|........|..+..++. ..+.+..+||+++|.+++.+|.
T Consensus 102 I~d~~~~~~~~~~~l~~l~~~~~~~~~~~~p~~vi~Ld~~~e~~~~R~ 149 (211)
T 1m7g_A 102 ITSFISPYRKDRDTARQLHEVATPGEETGLPFVEVYVDVPVEVAEQRD 149 (211)
T ss_dssp EEECCCCCHHHHHHHHHHHHCCCTTCSCCCCEEEEEEECCHHHHHTSC
T ss_pred EEecCCccHHHHHHHHHHhhhcccccccCCCeEEEEEeCCHHHHHHhh
Confidence 99966555677888888776 4467889999999999999883
No 108
>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0
Probab=99.24 E-value=2.1e-11 Score=112.48 Aligned_cols=47 Identities=23% Similarity=0.256 Sum_probs=42.2
Q ss_pred CCCCCchhHHHHHHHHhcCCccccCCccEEeeCc-cccccccCCCCCCCCCcccHHHHHhCCCCccCc
Q psy4598 117 RYRKPVPGMWEYLSQEKNGDLAIDISQSFYAGDA-AGRAANWAPKKKKDFACTDHLFAFNLNLAFFTP 183 (369)
Q Consensus 117 ~~rKP~~gm~~~~~~~~~~~~~i~~~~s~~VGD~-~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~~p 183 (369)
..+||+|.+++.+++++ ++++++++||||+ . +|+.+|+++|+.++..
T Consensus 180 ~~~kp~~~~~~~~~~~l----gi~~~~~~~iGD~~~----------------~Di~~~~~aG~~~~~v 227 (266)
T 3pdw_A 180 FIGKPESIIMEQAMRVL----GTDVSETLMVGDNYA----------------TDIMAGINAGMDTLLV 227 (266)
T ss_dssp ECSTTSSHHHHHHHHHH----TCCGGGEEEEESCTT----------------THHHHHHHHTCEEEEE
T ss_pred ccCCCCHHHHHHHHHHc----CCChhhEEEECCCcH----------------HHHHHHHHCCCeEEEE
Confidence 45899999999999996 7999999999999 6 8999999999988543
No 109
>2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A
Probab=99.24 E-value=6.9e-12 Score=116.62 Aligned_cols=124 Identities=17% Similarity=0.242 Sum_probs=83.9
Q ss_pred CCCceEEEEecCCceeecC--------CCCCCCCCcccc-----ccccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCC
Q psy4598 22 CNSAKIASFDLDGTLITTK--------SGKVFPVDTHDW-----KLLFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMS 88 (369)
Q Consensus 22 ~~~~k~~~fDlDgTLi~~~--------sg~~~~~~~~d~-----~~~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~ 88 (369)
....|+++||+||||+.+. .+..|.....+| ..++|++.+.|+.|+++|++++|+||.+.
T Consensus 56 ~~~~kavifDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~------- 128 (258)
T 2i33_A 56 TEKKPAIVLDLDETVLDNSPHQAMSVKTGKGYPYKWDDWINKAEAEALPGSIDFLKYTESKGVDIYYISNRKT------- 128 (258)
T ss_dssp CSSEEEEEECSBTTTEECHHHHHHHHHHSCCTTTTHHHHHHHCCCEECTTHHHHHHHHHHTTCEEEEEEEEEG-------
T ss_pred CCCCCEEEEeCcccCcCCHHHHHHHHhcccchHHHHHHHHHcCCCCcCccHHHHHHHHHHCCCEEEEEcCCch-------
Confidence 3567899999999999873 122341111222 45799999999999999999999999531
Q ss_pred HHHHHHHHHHHHHHcCCC----eEEEEecCCCCCCCCchhHHHHHHHHhcCCccccCCccEEeeCccccccccCCCCCCC
Q psy4598 89 TRDFQAKAEKIIKSLNVP----VQMFVATQYDRYRKPVPGMWEYLSQEKNGDLAIDISQSFYAGDAAGRAANWAPKKKKD 164 (369)
Q Consensus 89 ~~~~~~~i~~~l~~l~i~----~~~~~~~~~~~~rKP~~gm~~~~~~~~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d 164 (369)
.....+...|+.+|++ ++++++.+. ..||.+ ...+.+. + ...++||||+.
T Consensus 129 --~~~~~~~~~L~~~Gl~~v~~~~vi~~~~~--~~K~~~--~~~~~~~-----~--~~~~l~VGDs~------------- 182 (258)
T 2i33_A 129 --NQLDATIKNLERVGAPQATKEHILLQDPK--EKGKEK--RRELVSQ-----T--HDIVLFFGDNL------------- 182 (258)
T ss_dssp --GGHHHHHHHHHHHTCSSCSTTTEEEECTT--CCSSHH--HHHHHHH-----H--EEEEEEEESSG-------------
T ss_pred --hHHHHHHHHHHHcCCCcCCCceEEECCCC--CCCcHH--HHHHHHh-----C--CCceEEeCCCH-------------
Confidence 1133455667778876 456666543 246654 3333332 2 23499999999
Q ss_pred CCcccHHHHH-------h---------CCCCcc
Q psy4598 165 FACTDHLFAF-------N---------LNLAFF 181 (369)
Q Consensus 165 ~s~~D~~~A~-------n---------~Gi~f~ 181 (369)
+|+.+|. + +|++++
T Consensus 183 ---~Di~aA~~~~~~~r~a~v~~~~~~aG~~~i 212 (258)
T 2i33_A 183 ---SDFTGFDGKSVKDRNQAVTDSKAQFGEKFI 212 (258)
T ss_dssp ---GGSTTCSSCCHHHHHHHHHHTGGGBTTTEE
T ss_pred ---HHhcccccCCHHHHHHHHHHHHHHhcCceE
Confidence 7998883 4 799875
No 110
>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}
Probab=99.24 E-value=4.6e-11 Score=111.45 Aligned_cols=47 Identities=28% Similarity=0.260 Sum_probs=40.1
Q ss_pred CCceEEEEecCCceeecCCCCCCCCCccccccccccHHHHHHHHHHCCcEEEEEecCCCc
Q psy4598 23 NSAKIASFDLDGTLITTKSGKVFPVDTHDWKLLFSNIESVLKQYLDDGYKLVIFTNQGAI 82 (369)
Q Consensus 23 ~~~k~~~fDlDgTLi~~~sg~~~~~~~~d~~~~~p~v~~~L~~L~~~G~~i~i~TNq~gi 82 (369)
.+.|+++||+||||+... ..+|++.++|++|+++|++++++||+++.
T Consensus 12 ~~~k~i~~D~DGtL~~~~-------------~~~~~~~~~l~~l~~~g~~~~~~Tn~~~r 58 (284)
T 2hx1_A 12 PKYKCIFFDAFGVLKTYN-------------GLLPGIENTFDYLKAQGQDYYIVTNDASR 58 (284)
T ss_dssp GGCSEEEECSBTTTEETT-------------EECTTHHHHHHHHHHTTCEEEEEECCCSS
T ss_pred hcCCEEEEcCcCCcCcCC-------------eeChhHHHHHHHHHHCCCEEEEEeCCCCc
Confidence 457899999999999743 25799999999999999999999996653
No 111
>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13
Probab=99.23 E-value=4.5e-12 Score=124.27 Aligned_cols=100 Identities=18% Similarity=0.225 Sum_probs=80.9
Q ss_pred ccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHcCC--CeE--EEEecCCCC-----------CC
Q psy4598 55 LFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSLNV--PVQ--MFVATQYDR-----------YR 119 (369)
Q Consensus 55 ~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l~i--~~~--~~~~~~~~~-----------~r 119 (369)
++||+.+.|+.|+++|++++|+||.+ ...+..+++.+|+ +|+ .+++.++.. .+
T Consensus 216 l~pGv~elL~~Lk~~Gi~laIvTn~~------------~~~~~~~L~~lgL~~~Fd~~~Ivs~ddv~~~~~~~~~~kp~~ 283 (384)
T 1qyi_A 216 PVDEVKVLLNDLKGAGFELGIATGRP------------YTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLG 283 (384)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECSSC------------HHHHHHHHHHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCC
T ss_pred cCcCHHHHHHHHHhCCCEEEEEeCCc------------HHHHHHHHHHcCChHhcCCCEEEecccccccccccccccCCC
Confidence 69999999999999999999999953 2345566777787 377 677765432 48
Q ss_pred CCchhHHHHHHHHhc----------CCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCccC
Q psy4598 120 KPVPGMWEYLSQEKN----------GDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFFT 182 (369)
Q Consensus 120 KP~~gm~~~~~~~~~----------~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~~ 182 (369)
||+|.+|..+++.++ ....+++++|+||||+. .|+.+|+++||+++.
T Consensus 284 KP~P~~~~~a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~----------------~Di~aAk~AG~~~I~ 340 (384)
T 1qyi_A 284 KPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSL----------------ADLLSAQKIGATFIG 340 (384)
T ss_dssp TTSTHHHHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSH----------------HHHHHHHHHTCEEEE
T ss_pred CCCHHHHHHHHHHcCCccccccccccccCCCCcCeEEEcCCH----------------HHHHHHHHcCCEEEE
Confidence 999999999998752 01127899999999999 899999999999864
No 112
>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}
Probab=99.23 E-value=3e-11 Score=109.31 Aligned_cols=97 Identities=18% Similarity=0.240 Sum_probs=83.0
Q ss_pred ccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHcCCC--eEEEEecCCCCCCCCchhHHHHHHHH
Q psy4598 55 LFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSLNVP--VQMFVATQYDRYRKPVPGMWEYLSQE 132 (369)
Q Consensus 55 ~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l~i~--~~~~~~~~~~~~rKP~~gm~~~~~~~ 132 (369)
++|++.+.|+.|+++|++++|+||.. ...+..+++.+|+. |+.+++.+....+||+|.++..++++
T Consensus 95 ~~~~~~~~l~~l~~~g~~~~i~t~~~------------~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~ 162 (241)
T 2hoq_A 95 EVPGARKVLIRLKELGYELGIITDGN------------PVKQWEKILRLELDDFFEHVIISDFEGVKKPHPKIFKKALKA 162 (241)
T ss_dssp BCTTHHHHHHHHHHHTCEEEEEECSC------------HHHHHHHHHHTTCGGGCSEEEEGGGGTCCTTCHHHHHHHHHH
T ss_pred CCccHHHHHHHHHHCCCEEEEEECCC------------chhHHHHHHHcCcHhhccEEEEeCCCCCCCCCHHHHHHHHHH
Confidence 57999999999999999999999942 22345667788883 78888888888999999999999998
Q ss_pred hcCCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCccC
Q psy4598 133 KNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFFT 182 (369)
Q Consensus 133 ~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~~ 182 (369)
+ ++++++++||||+.. +|+.+|+++|+.++.
T Consensus 163 ~----g~~~~~~i~iGD~~~---------------~Di~~a~~aG~~~~~ 193 (241)
T 2hoq_A 163 F----NVKPEEALMVGDRLY---------------SDIYGAKRVGMKTVW 193 (241)
T ss_dssp H----TCCGGGEEEEESCTT---------------TTHHHHHHTTCEEEE
T ss_pred c----CCCcccEEEECCCch---------------HhHHHHHHCCCEEEE
Confidence 6 789999999999962 699999999999864
No 113
>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6
Probab=99.22 E-value=1.2e-12 Score=116.78 Aligned_cols=93 Identities=9% Similarity=0.109 Sum_probs=74.8
Q ss_pred ccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHcCCC--e-EEEEecCCCCCC--CCchhHHHHH
Q psy4598 55 LFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSLNVP--V-QMFVATQYDRYR--KPVPGMWEYL 129 (369)
Q Consensus 55 ~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l~i~--~-~~~~~~~~~~~r--KP~~gm~~~~ 129 (369)
++|++.+.|+.|+. +++|+||.. ...+..+++.+++. | +.+++.+....+ ||+|.+++.+
T Consensus 88 ~~~~~~~~l~~l~~---~~~i~s~~~------------~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~kpk~~~~~~~ 152 (229)
T 2fdr_A 88 IIDGVKFALSRLTT---PRCICSNSS------------SHRLDMMLTKVGLKPYFAPHIYSAKDLGADRVKPKPDIFLHG 152 (229)
T ss_dssp BCTTHHHHHHHCCS---CEEEEESSC------------HHHHHHHHHHTTCGGGTTTCEEEHHHHCTTCCTTSSHHHHHH
T ss_pred cCcCHHHHHHHhCC---CEEEEECCC------------hhHHHHHHHhCChHHhccceEEeccccccCCCCcCHHHHHHH
Confidence 46788888877753 899999943 22345667777874 6 666776665677 9999999999
Q ss_pred HHHhcCCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCccC
Q psy4598 130 SQEKNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFFT 182 (369)
Q Consensus 130 ~~~~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~~ 182 (369)
++++ +++++++++|||+. .|+.+|.++|+.++.
T Consensus 153 ~~~l----~~~~~~~i~iGD~~----------------~Di~~a~~aG~~~i~ 185 (229)
T 2fdr_A 153 AAQF----GVSPDRVVVVEDSV----------------HGIHGARAAGMRVIG 185 (229)
T ss_dssp HHHH----TCCGGGEEEEESSH----------------HHHHHHHHTTCEEEE
T ss_pred HHHc----CCChhHeEEEcCCH----------------HHHHHHHHCCCEEEE
Confidence 9996 79999999999999 899999999999754
No 114
>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*
Probab=99.22 E-value=9.6e-12 Score=109.21 Aligned_cols=94 Identities=15% Similarity=0.180 Sum_probs=70.1
Q ss_pred ccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHcCCC--eEEEEecCC----------CCCCCCc
Q psy4598 55 LFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSLNVP--VQMFVATQY----------DRYRKPV 122 (369)
Q Consensus 55 ~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l~i~--~~~~~~~~~----------~~~rKP~ 122 (369)
++|++.+.|+.|+++|++++|+||.. ...+..+++.+++. |...+...+ ....+++
T Consensus 77 l~~~~~~~l~~l~~~g~~~~i~T~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K 144 (211)
T 1l7m_A 77 PTEGAEETIKELKNRGYVVAVVSGGF------------DIAVNKIKEKLGLDYAFANRLIVKDGKLTGDVEGEVLKENAK 144 (211)
T ss_dssp BCTTHHHHHHHHHHTTEEEEEEEEEE------------HHHHHHHHHHHTCSEEEEEEEEEETTEEEEEEECSSCSTTHH
T ss_pred CCccHHHHHHHHHHCCCEEEEEcCCc------------HHHHHHHHHHcCCCeEEEeeeEEECCEEcCCcccCccCCccH
Confidence 57999999999999999999999832 11223456667764 322111111 1234667
Q ss_pred hhHHHHHHHHhcCCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCc
Q psy4598 123 PGMWEYLSQEKNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAF 180 (369)
Q Consensus 123 ~gm~~~~~~~~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f 180 (369)
+..+..+++++ ++++++++||||+. +|+.+|.++|+.+
T Consensus 145 ~~~l~~~~~~l----gi~~~~~~~iGD~~----------------~Di~~~~~ag~~~ 182 (211)
T 1l7m_A 145 GEILEKIAKIE----GINLEDTVAVGDGA----------------NDISMFKKAGLKI 182 (211)
T ss_dssp HHHHHHHHHHH----TCCGGGEEEEECSG----------------GGHHHHHHCSEEE
T ss_pred HHHHHHHHHHc----CCCHHHEEEEecCh----------------hHHHHHHHCCCEE
Confidence 88999999886 79999999999998 8999999999975
No 115
>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}
Probab=99.20 E-value=1.5e-12 Score=117.74 Aligned_cols=89 Identities=13% Similarity=0.085 Sum_probs=64.9
Q ss_pred ccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHcCCC--eEEEEecCCCCCCCCchhHHHHHHHH
Q psy4598 55 LFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSLNVP--VQMFVATQYDRYRKPVPGMWEYLSQE 132 (369)
Q Consensus 55 ~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l~i~--~~~~~~~~~~~~rKP~~gm~~~~~~~ 132 (369)
++||+.+.|+.|+++| +++|+||.+. ..+..+++.+|+. |+..++. .+|+|.++..+.+
T Consensus 97 ~~~g~~~~l~~l~~~g-~~~i~Tn~~~------------~~~~~~l~~~gl~~~f~~~~~~-----~~~K~~~~~~~~~- 157 (231)
T 2p11_A 97 VYPGALNALRHLGARG-PTVILSDGDV------------VFQPRKIARSGLWDEVEGRVLI-----YIHKELMLDQVME- 157 (231)
T ss_dssp BCTTHHHHHHHHHTTS-CEEEEEECCS------------SHHHHHHHHTTHHHHTTTCEEE-----ESSGGGCHHHHHH-
T ss_pred cCccHHHHHHHHHhCC-CEEEEeCCCH------------HHHHHHHHHcCcHHhcCeeEEe-----cCChHHHHHHHHh-
Confidence 6899999999999999 9999999642 1234455666652 3211111 1334678877765
Q ss_pred hcCCccccCCccEEeeCccccccccCCCCCCCCCcc---cHHHHHhCCCCccCc
Q psy4598 133 KNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACT---DHLFAFNLNLAFFTP 183 (369)
Q Consensus 133 ~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~---D~~~A~n~Gi~f~~p 183 (369)
++++++|+||||+. . |+.+|+++||+++..
T Consensus 158 -----~~~~~~~~~vgDs~----------------~d~~di~~A~~aG~~~i~v 190 (231)
T 2p11_A 158 -----CYPARHYVMVDDKL----------------RILAAMKKAWGARLTTVFP 190 (231)
T ss_dssp -----HSCCSEEEEECSCH----------------HHHHHHHHHHGGGEEEEEE
T ss_pred -----cCCCceEEEEcCcc----------------chhhhhHHHHHcCCeEEEe
Confidence 36899999999998 6 999999999998643
No 116
>2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A*
Probab=99.20 E-value=2.5e-13 Score=119.95 Aligned_cols=81 Identities=9% Similarity=-0.018 Sum_probs=60.1
Q ss_pred ccccHHHHHHHHHHC-CcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCCCCCCCCchhHHHHHHHHh
Q psy4598 55 LFSNIESVLKQYLDD-GYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSLNVPVQMFVATQYDRYRKPVPGMWEYLSQEK 133 (369)
Q Consensus 55 ~~p~v~~~L~~L~~~-G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l~i~~~~~~~~~~~~~rKP~~gm~~~~~~~~ 133 (369)
++||+.+.|++|+++ |++++|+||.+... +..+++.+|+ |+.+++. .+++++
T Consensus 74 ~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~------------~~~~l~~~gl-f~~i~~~--------------~~~~~~ 126 (193)
T 2i7d_A 74 PIPGALDAVREMNDLPDTQVFICTSPLLKY------------HHCVGEKYRW-VEQHLGP--------------QFVERI 126 (193)
T ss_dssp BCTTHHHHHHHHHTSTTEEEEEEECCCSSC------------TTTHHHHHHH-HHHHHCH--------------HHHTTE
T ss_pred cCcCHHHHHHHHHhCCCCeEEEEeCCChhh------------HHHHHHHhCc-hhhhcCH--------------HHHHHc
Confidence 689999999999999 99999999965321 1122334444 4433332 155554
Q ss_pred cCCccccCCccEEeeCccccccccCCCCCCCCCccc----HHHHH-hCCCCccC
Q psy4598 134 NGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTD----HLFAF-NLNLAFFT 182 (369)
Q Consensus 134 ~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D----~~~A~-n~Gi~f~~ 182 (369)
++++++++||||+. .| +.+|. ++|++.+.
T Consensus 127 ----~~~~~~~~~vgDs~----------------~dD~~~i~~A~~~aG~~~i~ 160 (193)
T 2i7d_A 127 ----ILTRDKTVVLGDLL----------------IDDKDTVRGQEETPSWEHIL 160 (193)
T ss_dssp ----EECSCGGGBCCSEE----------------EESSSCCCSSCSSCSSEEEE
T ss_pred ----CCCcccEEEECCch----------------hhCcHHHhhcccccccceEE
Confidence 78999999999998 66 99999 99999864
No 117
>1tev_A UMP-CMP kinase; ploop, NMP binding region, LID region, conformational changes, transferase; 2.10A {Homo sapiens} SCOP: c.37.1.1
Probab=99.20 E-value=8.8e-11 Score=102.76 Aligned_cols=97 Identities=13% Similarity=0.186 Sum_probs=71.2
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhccCCcEEEeCCcchhH---------H----H----------------HHHHHHH---H
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTLGSW---------Q----K----------------CVSVMKA---A 319 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~~~~~~i~~D~~~~~---------~----~----------------~~~~~~~---~ 319 (369)
+.+|+|+|+|||||||+++.|++.+++.+++.|.+-.. . . +...+.. .
T Consensus 3 ~~~I~l~G~~GsGKsT~a~~L~~~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~ 82 (196)
T 1tev_A 3 PLVVFVLGGPGAGKGTQCARIVEKYGYTHLSAGELLRDERKNPDSQYGELIEKYIKEGKIVPVEITISLLKREMDQTMAA 82 (196)
T ss_dssp CEEEEEECCTTSSHHHHHHHHHHHHCCEEEEHHHHHHHHHHCTTSTTHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEECCCCCCHHHHHHHHHHHhCCeEEeHHHHHHHHHhccCChHHHHHHHHHHCCCcCCHHHHHHHHHHHHHhhhcc
Confidence 57899999999999999999999999999998875210 0 0 0111111 1
Q ss_pred HhCCCcEEEeCCCCCHHHHHHHHHHHHhcCCeEEEEEEeCCHHHHHHHc
Q psy4598 320 LDSGLSVVVDNTNPDKESRHRYIEAAKQHGVRCIAVHMNISKEHAKHNI 368 (369)
Q Consensus 320 l~~g~~vIiD~tn~~~~~r~~~~~la~~~~~~v~~v~l~~~~e~~~~Rn 368 (369)
+..+..||+|+...+...+..|...+......-.+|++++|.+++.+|.
T Consensus 83 ~~~~~~vi~dg~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~e~~~~R~ 131 (196)
T 1tev_A 83 NAQKNKFLIDGFPRNQDNLQGWNKTMDGKADVSFVLFFDCNNEICIERC 131 (196)
T ss_dssp CTTCCEEEEESCCCSHHHHHHHHHHHTTTCEEEEEEEEECCHHHHHHHH
T ss_pred ccCCCeEEEeCCCCCHHHHHHHHHHhcccCCCCEEEEEECCHHHHHHHH
Confidence 2347789999999888877777666544333447899999999999884
No 118
>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}
Probab=99.20 E-value=1.1e-10 Score=107.94 Aligned_cols=46 Identities=22% Similarity=0.256 Sum_probs=40.1
Q ss_pred CCCCCchhHHHHHHHHhcCCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCccCc
Q psy4598 117 RYRKPVPGMWEYLSQEKNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFFTP 183 (369)
Q Consensus 117 ~~rKP~~gm~~~~~~~~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~~p 183 (369)
..+||+|.+|+.++++ +++++++||||+.. +|+.+|+++|++++..
T Consensus 184 ~~~KP~~~~~~~~~~~------~~~~~~~~VGD~~~---------------~Di~~A~~aG~~~i~v 229 (263)
T 1zjj_A 184 IIGKPNEPMYEVVREM------FPGEELWMVGDRLD---------------TDIAFAKKFGMKAIMV 229 (263)
T ss_dssp ECSTTSHHHHHHHHHH------STTCEEEEEESCTT---------------THHHHHHHTTCEEEEE
T ss_pred EecCCCHHHHHHHHHh------CCcccEEEECCChH---------------HHHHHHHHcCCeEEEE
Confidence 3689999999999986 67999999999952 8999999999998643
No 119
>4eun_A Thermoresistant glucokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Janibacter SP}
Probab=99.18 E-value=5.5e-11 Score=105.70 Aligned_cols=96 Identities=17% Similarity=0.223 Sum_probs=73.3
Q ss_pred ccccEEEEEEcCCCCcHHHHHHHHhccCCcEEEeCCcchh---------------------HHHHHHHHHHHHhCCCcEE
Q psy4598 269 AALDSVLIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTLGS---------------------WQKCVSVMKAALDSGLSVV 327 (369)
Q Consensus 269 ~~~~~lIll~G~pGSGKSTla~~L~~~~~~~~i~~D~~~~---------------------~~~~~~~~~~~l~~g~~vI 327 (369)
...+.+|+|+|+|||||||+++.|+..++..+++.|.+.. +..+...+...+..+..+|
T Consensus 26 ~~~g~~i~l~G~~GsGKSTl~~~L~~~~g~~~i~~d~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi 105 (200)
T 4eun_A 26 GEPTRHVVVMGVSGSGKTTIAHGVADETGLEFAEADAFHSPENIATMQRGIPLTDEDRWPWLRSLAEWMDARADAGVSTI 105 (200)
T ss_dssp --CCCEEEEECCTTSCHHHHHHHHHHHHCCEEEEGGGGSCHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCEE
T ss_pred CCCCcEEEEECCCCCCHHHHHHHHHHhhCCeEEcccccccHHHHHHHhcCCCCCCcccccHHHHHHHHHHHHHhcCCCEE
Confidence 3445799999999999999999999999999999998621 1223344455567788999
Q ss_pred EeCCCCCHHHHHHHHHHHHhcCCeEEEEEEeCCHHHHHHHc
Q psy4598 328 VDNTNPDKESRHRYIEAAKQHGVRCIAVHMNISKEHAKHNI 368 (369)
Q Consensus 328 iD~tn~~~~~r~~~~~la~~~~~~v~~v~l~~~~e~~~~Rn 368 (369)
+|.+...+..|..+. +...++.+|++++|.+++.+|.
T Consensus 106 id~~~~~~~~~~~l~----~~~~~~~vv~l~~~~e~l~~Rl 142 (200)
T 4eun_A 106 ITCSALKRTYRDVLR----EGPPSVDFLHLDGPAEVIKGRM 142 (200)
T ss_dssp EEECCCCHHHHHHHT----TSSSCCEEEEEECCHHHHHHHH
T ss_pred EEchhhhHHHHHHHH----HhCCceEEEEEeCCHHHHHHHH
Confidence 999988876665543 3334667899999999999884
No 120
>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens}
Probab=99.17 E-value=1.9e-10 Score=105.04 Aligned_cols=46 Identities=20% Similarity=0.178 Sum_probs=41.3
Q ss_pred CCCCchhHHHHHHHHhcCCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCccC
Q psy4598 118 YRKPVPGMWEYLSQEKNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFFT 182 (369)
Q Consensus 118 ~rKP~~gm~~~~~~~~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~~ 182 (369)
.+||+|.+++.+++++ +++++++++|||+.. +|+.+|+++|+.++.
T Consensus 188 ~~kpk~~~~~~~~~~l----gi~~~~~i~iGD~~~---------------nDi~~a~~aG~~~~~ 233 (271)
T 2x4d_A 188 VGKPSPEFFKSALQAI----GVEAHQAVMIGDDIV---------------GDVGGAQRCGMRALQ 233 (271)
T ss_dssp ESTTCHHHHHHHHHHH----TCCGGGEEEEESCTT---------------TTHHHHHHTTCEEEE
T ss_pred ccCCCHHHHHHHHHHh----CCCcceEEEECCCcH---------------HHHHHHHHCCCcEEE
Confidence 4899999999999986 799999999999962 799999999999854
No 121
>2cdn_A Adenylate kinase; phosphoryl transfer, associative mechanism, ATP-binding, nucleotide biosynthesis, nucleotide-binding, transferase; HET: ADP; 1.9A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1p4s_A
Probab=99.16 E-value=1.5e-10 Score=102.62 Aligned_cols=100 Identities=14% Similarity=0.227 Sum_probs=73.9
Q ss_pred ccccEEEEEEcCCCCcHHHHHHHHhccCCcEEEeCCcc-hh-------H-H---------------HHHHHHHHHH---h
Q psy4598 269 AALDSVLIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTL-GS-------W-Q---------------KCVSVMKAAL---D 321 (369)
Q Consensus 269 ~~~~~lIll~G~pGSGKSTla~~L~~~~~~~~i~~D~~-~~-------~-~---------------~~~~~~~~~l---~ 321 (369)
+.++.+|+|+|+|||||||+++.|++.+++.+++.|.+ +. . . .....+.+.+ .
T Consensus 17 ~~~~~~I~l~G~~GsGKST~a~~La~~l~~~~i~~d~~~r~~~~~~~~~g~~i~~~~~~g~~~~~~~~~~~~~~~~~~~~ 96 (201)
T 2cdn_A 17 RGSHMRVLLLGPPGAGKGTQAVKLAEKLGIPQISTGELFRRNIEEGTKLGVEAKRYLDAGDLVPSDLTNELVDDRLNNPD 96 (201)
T ss_dssp CCSCCEEEEECCTTSSHHHHHHHHHHHHTCCEEEHHHHHHHHHHTTCHHHHHHHHHHHHTCCCCHHHHHHHHHHHTTSGG
T ss_pred CCCCeEEEEECCCCCCHHHHHHHHHHHhCCcEEehhHHHHHHHHcCChHHHHHHHHHHcCCcccHHHHHHHHHHHHhccc
Confidence 34467999999999999999999999999999998765 21 0 0 0111222222 2
Q ss_pred CCCcEEEeCCCCCHHHHHHHHHHHHhcCCe-EEEEEEeCCHHHHHHHc
Q psy4598 322 SGLSVVVDNTNPDKESRHRYIEAAKQHGVR-CIAVHMNISKEHAKHNI 368 (369)
Q Consensus 322 ~g~~vIiD~tn~~~~~r~~~~~la~~~~~~-v~~v~l~~~~e~~~~Rn 368 (369)
.+..||+|+...+...+..+..++...+.. ..+|++++|.+++.+|.
T Consensus 97 ~~~~vIldg~~~~~~~~~~l~~~l~~~~~~~~~vi~l~~~~e~~~~Rl 144 (201)
T 2cdn_A 97 AANGFILDGYPRSVEQAKALHEMLERRGTDIDAVLEFRVSEEVLLERL 144 (201)
T ss_dssp GTTCEEEESCCCSHHHHHHHHHHHHHTTCCCCEEEEEECCHHHHHHHH
T ss_pred CCCeEEEECCCCCHHHHHHHHHHHHhcCCCCCEEEEEECCHHHHHHHH
Confidence 466899999877777787777777766653 37899999999999884
No 122
>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*
Probab=99.13 E-value=4e-10 Score=109.22 Aligned_cols=47 Identities=23% Similarity=0.357 Sum_probs=41.1
Q ss_pred CceEEEEecCCceeecCCCCCCCCCccccccccccHHHHHHHHHHCCcEEEEEecCCCcC
Q psy4598 24 SAKIASFDLDGTLITTKSGKVFPVDTHDWKLLFSNIESVLKQYLDDGYKLVIFTNQGAIG 83 (369)
Q Consensus 24 ~~k~~~fDlDgTLi~~~sg~~~~~~~~d~~~~~p~v~~~L~~L~~~G~~i~i~TNq~gi~ 83 (369)
+.|.++||+||||+... ..+|++.+.|+.|++.|++++++||+++.+
T Consensus 12 ~~~~~l~D~DGvl~~g~-------------~~~p~a~~~l~~l~~~g~~~~~vTNn~~~~ 58 (352)
T 3kc2_A 12 KKIAFAFDIDGVLFRGK-------------KPIAGASDALKLLNRNKIPYILLTNGGGFS 58 (352)
T ss_dssp CCEEEEECCBTTTEETT-------------EECTTHHHHHHHHHHTTCCEEEECSCCSSC
T ss_pred cCCEEEEECCCeeEcCC-------------eeCcCHHHHHHHHHHCCCEEEEEeCCCCCC
Confidence 57899999999999753 268999999999999999999999987543
No 123
>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}
Probab=99.13 E-value=1.5e-11 Score=118.01 Aligned_cols=95 Identities=14% Similarity=0.144 Sum_probs=77.3
Q ss_pred ccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHcCCC--eEEEE----------ecCCCCCCCCc
Q psy4598 55 LFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSLNVP--VQMFV----------ATQYDRYRKPV 122 (369)
Q Consensus 55 ~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l~i~--~~~~~----------~~~~~~~rKP~ 122 (369)
++|++.+.|+.|++.|++++|+||.. ...++.+++.+|+. |...+ ..+....+||+
T Consensus 179 ~~pg~~~~l~~L~~~g~~~~ivS~~~------------~~~~~~~~~~lgl~~~~~~~l~~~d~~~tg~~~~~~~~~kpk 246 (335)
T 3n28_A 179 LMPELPELVATLHAFGWKVAIASGGF------------TYFSDYLKEQLSLDYAQSNTLEIVSGKLTGQVLGEVVSAQTK 246 (335)
T ss_dssp CCTTHHHHHHHHHHTTCEEEEEEEEE------------HHHHHHHHHHHTCSEEEEEEEEEETTEEEEEEESCCCCHHHH
T ss_pred cCcCHHHHHHHHHHCCCEEEEEeCCc------------HHHHHHHHHHcCCCeEEeeeeEeeCCeeeeeecccccChhhh
Confidence 68999999999999999999999932 34456677888874 22111 11355678999
Q ss_pred hhHHHHHHHHhcCCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCcc
Q psy4598 123 PGMWEYLSQEKNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFF 181 (369)
Q Consensus 123 ~gm~~~~~~~~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~ 181 (369)
|.++..+++++ ++++++++||||+. .|+.+|.++|+.+.
T Consensus 247 ~~~~~~~~~~l----gi~~~~~v~vGDs~----------------nDi~~a~~aG~~va 285 (335)
T 3n28_A 247 ADILLTLAQQY----DVEIHNTVAVGDGA----------------NDLVMMAAAGLGVA 285 (335)
T ss_dssp HHHHHHHHHHH----TCCGGGEEEEECSG----------------GGHHHHHHSSEEEE
T ss_pred HHHHHHHHHHc----CCChhhEEEEeCCH----------------HHHHHHHHCCCeEE
Confidence 99999999996 79999999999999 89999999999874
No 124
>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14
Probab=99.13 E-value=1.1e-10 Score=104.88 Aligned_cols=46 Identities=22% Similarity=0.234 Sum_probs=42.1
Q ss_pred CCCCCchhHHHHHHHHhcCCccccCCccEEeeCc-cccccccCCCCCCCCCcccHHHHHhCCCCccC
Q psy4598 117 RYRKPVPGMWEYLSQEKNGDLAIDISQSFYAGDA-AGRAANWAPKKKKDFACTDHLFAFNLNLAFFT 182 (369)
Q Consensus 117 ~~rKP~~gm~~~~~~~~~~~~~i~~~~s~~VGD~-~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~~ 182 (369)
..+||+|.+++.+++++ +++++++++|||+ . +|+.+|+++|+.++.
T Consensus 173 ~~~kpk~~~~~~~~~~l----gi~~~~~i~iGD~~~----------------nDi~~~~~aG~~~~~ 219 (250)
T 2c4n_A 173 YVGKPSPWIIRAALNKM----QAHSEETVIVGDNLR----------------TDILAGFQAGLETIL 219 (250)
T ss_dssp ECSTTSTHHHHHHHHHH----TCCGGGEEEEESCTT----------------THHHHHHHTTCEEEE
T ss_pred EeCCCCHHHHHHHHHHc----CCCcceEEEECCCch----------------hHHHHHHHcCCeEEE
Confidence 47899999999999996 7999999999999 7 899999999999754
No 125
>3uie_A Adenylyl-sulfate kinase 1, chloroplastic; rossmann fold, transferase-transferase complex; HET: ADX ANP; 1.79A {Arabidopsis thaliana} SCOP: c.37.1.0 PDB: 4fxp_A*
Probab=99.12 E-value=2.2e-10 Score=101.81 Aligned_cols=100 Identities=17% Similarity=0.219 Sum_probs=77.9
Q ss_pred ccccccEEEEEEcCCCCcHHHHHHHHhccC---CcE--EEeCCcchh----------------HHHHHHHHHHHHhCCCc
Q psy4598 267 MKAALDSVLIMIGSQGSGKSSFVSTYLKPL---NYT--TVNRDTLGS----------------WQKCVSVMKAALDSGLS 325 (369)
Q Consensus 267 ~~~~~~~lIll~G~pGSGKSTla~~L~~~~---~~~--~i~~D~~~~----------------~~~~~~~~~~~l~~g~~ 325 (369)
+....+.+|+|+|+|||||||+++.|+..+ +.. +++.|.++. +......+......+..
T Consensus 20 ~~~~~g~~i~l~G~sGsGKSTl~~~La~~l~~~G~~~~~~d~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (200)
T 3uie_A 20 LLDQKGCVIWVTGLSGSGKSTLACALNQMLYQKGKLCYILDGDNVRHGLNRDLSFKAEDRAENIRRVGEVAKLFADAGII 99 (200)
T ss_dssp HHTSCCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEHHHHTTTTTTTCCSSHHHHHHHHHHHHHHHHHHHHTTCE
T ss_pred hcCCCCeEEEEECCCCCCHHHHHHHHHHHHHhcCceEEEecCchhhhHhhcccCcChHHHHHHHHHHHHHHHHHHhCCce
Confidence 334456899999999999999999999876 554 888887631 22333455556678889
Q ss_pred EEEeCCCCCHHHHHHHHHHHHhcCCeEEEEEEeCCHHHHHHHc
Q psy4598 326 VVVDNTNPDKESRHRYIEAAKQHGVRCIAVHMNISKEHAKHNI 368 (369)
Q Consensus 326 vIiD~tn~~~~~r~~~~~la~~~~~~v~~v~l~~~~e~~~~Rn 368 (369)
+|++..+..+..|..+.+++. +..+..||+++|.+++.+|.
T Consensus 100 vi~~~~~~~~~~r~~~~~~~~--~~~~~~v~L~a~~e~~~~R~ 140 (200)
T 3uie_A 100 CIASLISPYRTDRDACRSLLP--EGDFVEVFMDVPLSVCEARD 140 (200)
T ss_dssp EEEECCCCCHHHHHHHHHTSC--TTSEEEEEECCCHHHHHHHC
T ss_pred EEEecCCchHHHHHHHHHhcC--CCCEEEEEEeCCHHHHHHhc
Confidence 999999988888888876554 55788899999999999984
No 126
>3lw7_A Adenylate kinase related protein (ADKA-like); AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 2.30A {Sulfolobus solfataricus} PDB: 3h0k_A
Probab=99.11 E-value=2.8e-10 Score=97.42 Aligned_cols=91 Identities=16% Similarity=0.193 Sum_probs=69.5
Q ss_pred EEEEEEcCCCCcHHHHHHHHhccCCcEEEeCCcc-hhH---------------H---------HHHHHHHHHH--hCCCc
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTL-GSW---------------Q---------KCVSVMKAAL--DSGLS 325 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~~~~~~i~~D~~-~~~---------------~---------~~~~~~~~~l--~~g~~ 325 (369)
++|+|+|+|||||||+++.| +.+++.+++.|++ +.. . .....+...+ ..+..
T Consensus 2 ~~I~l~G~~GsGKsT~a~~L-~~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 80 (179)
T 3lw7_A 2 KVILITGMPGSGKSEFAKLL-KERGAKVIVMSDVVRKRYSIEAKPGERLMDFAKRLREIYGDGVVARLCVEELGTSNHDL 80 (179)
T ss_dssp CEEEEECCTTSCHHHHHHHH-HHTTCEEEEHHHHHHHHHHHHC---CCHHHHHHHHHHHHCTTHHHHHHHHHHCSCCCSC
T ss_pred cEEEEECCCCCCHHHHHHHH-HHCCCcEEEHhHHHHHHHHhcCCChhHHHHHHHHHHhhCCHHHHHHHHHHHHHhcCCCe
Confidence 47999999999999999999 8899999997654 210 0 0122344455 56778
Q ss_pred EEEeCCCCCHHHHHHHHHHHHhcCCeEEEEEEeCCHHHHHHHc
Q psy4598 326 VVVDNTNPDKESRHRYIEAAKQHGVRCIAVHMNISKEHAKHNI 368 (369)
Q Consensus 326 vIiD~tn~~~~~r~~~~~la~~~~~~v~~v~l~~~~e~~~~Rn 368 (369)
||+|+. .....+..+.+.+ +.+..+|++++|.+++.+|.
T Consensus 81 vi~dg~-~~~~~~~~l~~~~---~~~~~~i~l~~~~~~~~~R~ 119 (179)
T 3lw7_A 81 VVFDGV-RSLAEVEEFKRLL---GDSVYIVAVHSPPKIRYKRM 119 (179)
T ss_dssp EEEECC-CCHHHHHHHHHHH---CSCEEEEEEECCHHHHHHHH
T ss_pred EEEeCC-CCHHHHHHHHHHh---CCCcEEEEEECCHHHHHHHH
Confidence 999998 7788777776655 35788999999999999884
No 127
>2c95_A Adenylate kinase 1; transferase, AP4A, nucleotide kinase, transferase ATP-bindi; HET: B4P; 1.71A {Homo sapiens} PDB: 1z83_A* 3adk_A
Probab=99.10 E-value=2.9e-10 Score=99.76 Aligned_cols=94 Identities=14% Similarity=0.282 Sum_probs=68.6
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhccCCcEEEeCCcchhH----------------------------HHHHHHHHHHHhCC
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTLGSW----------------------------QKCVSVMKAALDSG 323 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~~~~~~i~~D~~~~~----------------------------~~~~~~~~~~l~~g 323 (369)
+.+|+|+|+|||||||+++.|++.+++.+++.|.+-.. ..+...+...+..|
T Consensus 9 ~~~I~l~G~~GsGKsT~~~~La~~l~~~~i~~d~~~~~~~~~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~ 88 (196)
T 2c95_A 9 TNIIFVVGGPGSGKGTQCEKIVQKYGYTHLSTGDLLRSEVSSGSARGKKLSEIMEKGQLVPLETVLDMLRDAMVAKVNTS 88 (196)
T ss_dssp SCEEEEEECTTSSHHHHHHHHHHHHCCEEEEHHHHHHHHHHTTCHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHTTTC
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHhCCeEEcHHHHHHHHHHcCChHHHHHHHHHHcCCcCCHHHHHHHHHHHHHhccccC
Confidence 46899999999999999999999999999998875210 01122233344578
Q ss_pred CcEEEeCCCCCHHHHHHHHHHHHhcCCeEEEEEEeCCHHHHHHHc
Q psy4598 324 LSVVVDNTNPDKESRHRYIEAAKQHGVRCIAVHMNISKEHAKHNI 368 (369)
Q Consensus 324 ~~vIiD~tn~~~~~r~~~~~la~~~~~~v~~v~l~~~~e~~~~Rn 368 (369)
..||+|........+..+...+ ..+-.+|++++|.+++.+|.
T Consensus 89 ~~vi~d~~~~~~~~~~~~~~~~---~~~~~vi~l~~~~e~~~~R~ 130 (196)
T 2c95_A 89 KGFLIDGYPREVQQGEEFERRI---GQPTLLLYVDAGPETMTQRL 130 (196)
T ss_dssp SCEEEESCCCSHHHHHHHHHHT---CCCSEEEEEECCHHHHHHHH
T ss_pred CcEEEeCCCCCHHHHHHHHHhc---CCCCEEEEEECCHHHHHHHH
Confidence 8999998776666555554433 23347899999999998884
No 128
>1aky_A Adenylate kinase; ATP:AMP phosphotransferase, myokinase, transferase (phosphotransferase); HET: AP5; 1.63A {Saccharomyces cerevisiae} SCOP: c.37.1.1 g.41.2.1 PDB: 2aky_A* 3aky_A* 1dvr_A*
Probab=99.10 E-value=3.7e-10 Score=101.64 Aligned_cols=97 Identities=15% Similarity=0.251 Sum_probs=71.5
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhccCCcEEEeCCcc-hhH-----------------------HHHHHHHHHHHh----CC
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTL-GSW-----------------------QKCVSVMKAALD----SG 323 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~~~~~~i~~D~~-~~~-----------------------~~~~~~~~~~l~----~g 323 (369)
+.+|+|+|+|||||||+++.|++.+++.+++.|++ +.. ......+...+. .+
T Consensus 4 ~~~I~l~G~~GsGKsT~a~~La~~l~~~~i~~d~~~~~~~~~~~~~g~~i~~~~~~g~~~~~~~~~~~l~~~l~~~~~~~ 83 (220)
T 1aky_A 4 SIRMVLIGPPGAGKGTQAPNLQERFHAAHLATGDMLRSQIAKGTQLGLEAKKIMDQGGLVSDDIMVNMIKDELTNNPACK 83 (220)
T ss_dssp CCEEEEECCTTSSHHHHHHHHHHHHCCEEEEHHHHHHHHHHTTCHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHCGGGG
T ss_pred CcEEEEECCCCCCHHHHHHHHHHHcCceEEehhHHHHHHHHcCChHHHHHHHHHHCCCcCCHHHHHHHHHHHHHhccccC
Confidence 46899999999999999999999999999999765 210 011223334443 46
Q ss_pred CcEEEeCCCCCHHHHHHHHHHHHhcCCeE-EEEEEeCCHHHHHHHc
Q psy4598 324 LSVVVDNTNPDKESRHRYIEAAKQHGVRC-IAVHMNISKEHAKHNI 368 (369)
Q Consensus 324 ~~vIiD~tn~~~~~r~~~~~la~~~~~~v-~~v~l~~~~e~~~~Rn 368 (369)
..+|+|+...+...+..+..++...+..+ .+|++++|.+++.+|.
T Consensus 84 ~~~i~dg~~~~~~~~~~l~~~l~~~~~~~d~vi~L~~~~e~~~~R~ 129 (220)
T 1aky_A 84 NGFILDGFPRTIPQAEKLDQMLKEQGTPLEKAIELKVDDELLVARI 129 (220)
T ss_dssp SCEEEESCCCSHHHHHHHHHHHHHHTCCCCEEEEEECCHHHHHHHH
T ss_pred CCeEEeCCCCCHHHHHHHHHHHHhcCCCCCEEEEEECCHHHHHHHH
Confidence 68999986556666666666666666554 6999999999999883
No 129
>3cm0_A Adenylate kinase; ATP-binding, cytoplasm, nucleotide biosynthesis, nucleotide-binding, transferase, structural genomics; 1.80A {Thermus thermophilus}
Probab=99.10 E-value=3.6e-10 Score=98.57 Aligned_cols=95 Identities=15% Similarity=0.245 Sum_probs=70.4
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhccCCcEEEeCCcchh--------H----------------HHHHHHHHHHHhCCCcEE
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTLGS--------W----------------QKCVSVMKAALDSGLSVV 327 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~~~~~~i~~D~~~~--------~----------------~~~~~~~~~~l~~g~~vI 327 (369)
+.+|+|+|+|||||||+++.|++.+++.+++.|.+-. . ......+...+..+ +|
T Consensus 4 g~~I~l~G~~GsGKST~~~~La~~l~~~~i~~d~~~~~~~~~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~l~~~--~i 81 (186)
T 3cm0_A 4 GQAVIFLGPPGAGKGTQASRLAQELGFKKLSTGDILRDHVARGTPLGERVRPIMERGDLVPDDLILELIREELAER--VI 81 (186)
T ss_dssp EEEEEEECCTTSCHHHHHHHHHHHHTCEEECHHHHHHHHHHTTCHHHHHHHHHHHTTCCCCHHHHHHHHHHHCCSE--EE
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHhCCeEecHHHHHHHHHHcCChHHHHHHHHHHcCCcCCHHHHHHHHHHHhcCC--EE
Confidence 4689999999999999999999999999999875421 0 01122233334333 99
Q ss_pred EeCCCCCHHHHHHHHHHHHhcCC-eEEEEEEeCCHHHHHHHc
Q psy4598 328 VDNTNPDKESRHRYIEAAKQHGV-RCIAVHMNISKEHAKHNI 368 (369)
Q Consensus 328 iD~tn~~~~~r~~~~~la~~~~~-~v~~v~l~~~~e~~~~Rn 368 (369)
+|........+..+..++.+.+. +-.++++++|.+++.+|.
T Consensus 82 ~dg~~~~~~~~~~l~~~l~~~~~~~~~vi~l~~~~e~~~~R~ 123 (186)
T 3cm0_A 82 FDGFPRTLAQAEALDRLLSETGTRLLGVVLVEVPEEELVRRI 123 (186)
T ss_dssp EESCCCSHHHHHHHHHHHHHTTEEEEEEEEEECCHHHHHHHH
T ss_pred EeCCCCCHHHHHHHHHHHHhcCCCCCEEEEEeCCHHHHHHHH
Confidence 99988777777666666776665 347899999999998873
No 130
>3fb4_A Adenylate kinase; psychrophIle, phosphotransferase, ATP-binding, nucleotide-binding, transferase; HET: AP5; 2.00A {Marinibacillus marinus}
Probab=99.10 E-value=3.7e-10 Score=101.04 Aligned_cols=95 Identities=8% Similarity=0.203 Sum_probs=73.9
Q ss_pred EEEEEcCCCCcHHHHHHHHhccCCcEEEeCCcch-h-----------------------HHHHHHHHHHHHh---CCCcE
Q psy4598 274 VLIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTLG-S-----------------------WQKCVSVMKAALD---SGLSV 326 (369)
Q Consensus 274 lIll~G~pGSGKSTla~~L~~~~~~~~i~~D~~~-~-----------------------~~~~~~~~~~~l~---~g~~v 326 (369)
.|+|+|+|||||||+++.|++.+++.+++.|.+- . .......+.+.+. .+..+
T Consensus 2 ~I~l~G~~GsGKsT~a~~L~~~~~~~~i~~d~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~ 81 (216)
T 3fb4_A 2 NIVLMGLPGAGKGTQAEQIIEKYEIPHISTGDMFRAAIKNGTELGLKAKSFMDQGNLVPDEVTIGIVHERLSKDDCQKGF 81 (216)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHCCCEEEHHHHHHHHHHTTCHHHHHHHHHHHHTCCCCHHHHHHHHHHHHTSGGGTTCE
T ss_pred EEEEECCCCCCHHHHHHHHHHHhCCcEeeHHHHHHHHHhcCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcccCCCcE
Confidence 4789999999999999999999999999997652 1 0112233344443 37789
Q ss_pred EEeCCCCCHHHHHHHHHHHHhcCCeE-EEEEEeCCHHHHHHHc
Q psy4598 327 VVDNTNPDKESRHRYIEAAKQHGVRC-IAVHMNISKEHAKHNI 368 (369)
Q Consensus 327 IiD~tn~~~~~r~~~~~la~~~~~~v-~~v~l~~~~e~~~~Rn 368 (369)
|+|+.......+..+...+...+..+ .++++++|.+++.+|-
T Consensus 82 ildg~p~~~~~~~~l~~~~~~~~~~~d~vi~l~~~~e~~~~Rl 124 (216)
T 3fb4_A 82 LLDGFPRTVAQADALDSLLTDLGKKLDYVLNIKVEQEELMKRL 124 (216)
T ss_dssp EEESCCCSHHHHHHHHHHHHHTTCCCSEEEEEECCHHHHHHHH
T ss_pred EEeCCCCCHHHHHHHHHHHHhcCCCCCEEEEEECCHHHHHHHH
Confidence 99998888888888888877777665 7899999999999884
No 131
>3dl0_A Adenylate kinase; phosphotransferase, zinc coordination, ATP-binding, binding, nucleotide biosynthesis, nucleotide-binding, trans; HET: AP5; 1.58A {Bacillus subtilis} PDB: 1p3j_A* 2ori_A* 2eu8_A* 2oo7_A* 2p3s_A* 2qaj_A* 2osb_A* 3dkv_A* 1zin_A* 1zio_A* 1zip_A* 1s3g_A*
Probab=99.10 E-value=3.7e-10 Score=101.15 Aligned_cols=95 Identities=12% Similarity=0.226 Sum_probs=74.1
Q ss_pred EEEEEcCCCCcHHHHHHHHhccCCcEEEeCCcc-hh-----------------------HHHHHHHHHHHHh---CCCcE
Q psy4598 274 VLIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTL-GS-----------------------WQKCVSVMKAALD---SGLSV 326 (369)
Q Consensus 274 lIll~G~pGSGKSTla~~L~~~~~~~~i~~D~~-~~-----------------------~~~~~~~~~~~l~---~g~~v 326 (369)
.|+|+|+|||||||+++.|++.+++.+++.|++ +. .......+...+. .+..+
T Consensus 2 ~I~l~G~~GsGKsT~a~~L~~~~~~~~i~~d~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~ 81 (216)
T 3dl0_A 2 NLVLMGLPGAGKGTQGERIVEKYGIPHISTGDMFRAAMKEETPLGLEAKSYIDKGELVPDEVTIGIVKERLGKDDCERGF 81 (216)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHSSCCEEEHHHHHHHHHHTTCHHHHHHHHHHTTTCCCCHHHHHHHHHHHHTSGGGTTCE
T ss_pred EEEEECCCCCCHHHHHHHHHHHhCCcEEeHHHHHHHHHhcCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcccccCCE
Confidence 478999999999999999999999999999765 21 1112233344443 37789
Q ss_pred EEeCCCCCHHHHHHHHHHHHhcCCeE-EEEEEeCCHHHHHHHc
Q psy4598 327 VVDNTNPDKESRHRYIEAAKQHGVRC-IAVHMNISKEHAKHNI 368 (369)
Q Consensus 327 IiD~tn~~~~~r~~~~~la~~~~~~v-~~v~l~~~~e~~~~Rn 368 (369)
|+|+.......+..+.+.+...+..+ .++++++|.+++.+|.
T Consensus 82 ildg~p~~~~~~~~~~~~~~~~~~~~d~vi~l~~~~e~~~~Rl 124 (216)
T 3dl0_A 82 LLDGFPRTVAQAEALEEILEEMGKPIDYVINIQVDKDVLMERL 124 (216)
T ss_dssp EEESCCCSHHHHHHHHHHHHHTTCCCSEEEEEECCGGGHHHHH
T ss_pred EEeCCCCCHHHHHHHHHHHHHcCCCCCEEEEEECCHHHHHHHH
Confidence 99998888888888888877777655 7899999999999884
No 132
>2bwj_A Adenylate kinase 5; phosphoryl transfer reaction, transferase; HET: AMP; 2.3A {Homo sapiens}
Probab=99.10 E-value=3.1e-10 Score=99.88 Aligned_cols=95 Identities=16% Similarity=0.257 Sum_probs=69.3
Q ss_pred ccEEEEEEcCCCCcHHHHHHHHhccCCcEEEeCCcchhH----------------------------HHHHHHHHHHHhC
Q psy4598 271 LDSVLIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTLGSW----------------------------QKCVSVMKAALDS 322 (369)
Q Consensus 271 ~~~lIll~G~pGSGKSTla~~L~~~~~~~~i~~D~~~~~----------------------------~~~~~~~~~~l~~ 322 (369)
++.+|+|+|+|||||||+++.|++.+++.+++.|.+-.. ..+...+...+..
T Consensus 11 ~~~~I~l~G~~GsGKsT~a~~L~~~l~~~~i~~d~~~~~~~~~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~i~~~~~~ 90 (199)
T 2bwj_A 11 KCKIIFIIGGPGSGKGTQCEKLVEKYGFTHLSTGELLREELASESERSKLIRDIMERGDLVPSGIVLELLKEAMVASLGD 90 (199)
T ss_dssp HSCEEEEEECTTSSHHHHHHHHHHHHTCEEEEHHHHHHHHHHHTCHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHTTS
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHhCCeEEcHHHHHHHHHHhCCHHHHHHHHHHHcCCcCCHHHHHHHHHHHHhccccc
Confidence 467999999999999999999999999999998876210 0011122233346
Q ss_pred CCcEEEeCCCCCHHHHHHHHHHHHhcCCeEEEEEEeCCHHHHHHHc
Q psy4598 323 GLSVVVDNTNPDKESRHRYIEAAKQHGVRCIAVHMNISKEHAKHNI 368 (369)
Q Consensus 323 g~~vIiD~tn~~~~~r~~~~~la~~~~~~v~~v~l~~~~e~~~~Rn 368 (369)
+..||+|....+...+..+.. ..+.+-.+|++++|.+++.+|.
T Consensus 91 ~~~vi~dg~~~~~~~~~~l~~---~~~~~~~~i~l~~~~~~~~~R~ 133 (199)
T 2bwj_A 91 TRGFLIDGYPREVKQGEEFGR---RIGDPQLVICMDCSADTMTNRL 133 (199)
T ss_dssp CSCEEEETCCSSHHHHHHHHH---HTCCCSEEEEEECCHHHHHHHH
T ss_pred CccEEEeCCCCCHHHHHHHHH---hcCCCCEEEEEECCHHHHHHHH
Confidence 789999998877776665543 2223336899999999998883
No 133
>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens}
Probab=99.09 E-value=3.2e-11 Score=107.47 Aligned_cols=119 Identities=14% Similarity=0.192 Sum_probs=91.2
Q ss_pred CCceEEEEecCCceeecCCCCCCCCCccc--------------cccccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCC
Q psy4598 23 NSAKIASFDLDGTLITTKSGKVFPVDTHD--------------WKLLFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMS 88 (369)
Q Consensus 23 ~~~k~~~fDlDgTLi~~~sg~~~~~~~~d--------------~~~~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~ 88 (369)
.+.+.+++|||+||+.+..... ...| +..+.||+.+.|++|++. |.++|+||..
T Consensus 26 ~~k~~LVLDLD~TLvhs~~~~~---~~~d~~~~~~~~g~~~~~~v~~RPgv~efL~~l~~~-~~i~I~Tss~-------- 93 (195)
T 2hhl_A 26 YGKKCVVIDLDETLVHSSFKPI---SNADFIVPVEIDGTIHQVYVLKRPHVDEFLQRMGQL-FECVLFTASL-------- 93 (195)
T ss_dssp TTCCEEEECCBTTTEEEESSCC---TTCSEEEEEEETTEEEEEEEEECTTHHHHHHHHHHH-SEEEEECSSC--------
T ss_pred CCCeEEEEccccceEcccccCC---CCccceeeeecCCceeeEEEEeCcCHHHHHHHHHcC-CeEEEEcCCC--------
Confidence 4578999999999998753111 1111 134689999999999998 9999999943
Q ss_pred HHHHHHHHHHHHHHcCC--CeEEEEecCCCCCCCCchhHHHHHHHHhcCCccccCCccEEeeCccccccccCCCCCCCCC
Q psy4598 89 TRDFQAKAEKIIKSLNV--PVQMFVATQYDRYRKPVPGMWEYLSQEKNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFA 166 (369)
Q Consensus 89 ~~~~~~~i~~~l~~l~i--~~~~~~~~~~~~~rKP~~gm~~~~~~~~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s 166 (369)
+..++.+++.+++ .|...++.+++...| +.+...++.+ +.+++++++|+|+.
T Consensus 94 ----~~~a~~vl~~ld~~~~f~~~l~rd~~~~~k---~~~lK~L~~L----g~~~~~~vivDDs~--------------- 147 (195)
T 2hhl_A 94 ----AKYADPVADLLDRWGVFRARLFRESCVFHR---GNYVKDLSRL----GRELSKVIIVDNSP--------------- 147 (195)
T ss_dssp ----HHHHHHHHHHHCCSSCEEEEECGGGCEEET---TEEECCGGGS----SSCGGGEEEEESCG---------------
T ss_pred ----HHHHHHHHHHhCCcccEEEEEEcccceecC---CceeeeHhHh----CCChhHEEEEECCH---------------
Confidence 3456677777776 378777777666555 6666667664 78999999999999
Q ss_pred cccHHHHHhCCCCc
Q psy4598 167 CTDHLFAFNLNLAF 180 (369)
Q Consensus 167 ~~D~~~A~n~Gi~f 180 (369)
.++.+|.++||..
T Consensus 148 -~~~~~~~~ngi~i 160 (195)
T 2hhl_A 148 -ASYIFHPENAVPV 160 (195)
T ss_dssp -GGGTTCGGGEEEC
T ss_pred -HHhhhCccCccEE
Confidence 7999999999985
No 134
>3sr0_A Adenylate kinase; phosphoryl transfer analogue, ALF4, transferase (phosphotran phosphoryl transfer, nucleotide-binding; HET: ADP AMP; 1.56A {Aquifex aeolicus} PDB: 2rh5_A 2rgx_A*
Probab=99.07 E-value=5.7e-10 Score=100.19 Aligned_cols=95 Identities=13% Similarity=0.270 Sum_probs=75.4
Q ss_pred EEEEEcCCCCcHHHHHHHHhccCCcEEEeCCc-chhH-----------------------HHHHHHHHHHHhCCCcEEEe
Q psy4598 274 VLIMIGSQGSGKSSFVSTYLKPLNYTTVNRDT-LGSW-----------------------QKCVSVMKAALDSGLSVVVD 329 (369)
Q Consensus 274 lIll~G~pGSGKSTla~~L~~~~~~~~i~~D~-~~~~-----------------------~~~~~~~~~~l~~g~~vIiD 329 (369)
+|+|.|||||||+|.|+.|++.+++.||+..+ +|.. +.....+.+.+.....+|+|
T Consensus 2 ~Iil~GpPGsGKgTqa~~La~~~g~~~istGdllR~~i~~~t~lg~~~~~~~~~G~lvpd~iv~~lv~~~l~~~~~~ilD 81 (206)
T 3sr0_A 2 ILVFLGPPGAGKGTQAKRLAKEKGFVHISTGDILREAVQKGTPLGKKAKEYMERGELVPDDLIIALIEEVFPKHGNVIFD 81 (206)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHCCEEEEHHHHHHHHHHHTCHHHHHHHHHHHHTCCCCHHHHHHHHHHHCCSSSCEEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCCeEEcHHHHHHHHHHhcChhhhhHHHHHhcCCcCCHHHHHHHHHHhhccCCceEec
Confidence 58899999999999999999999999999754 4310 11234455666666679999
Q ss_pred CCCCCHHHHHHHHHHHHhcCCeE-EEEEEeCCHHHHHHHc
Q psy4598 330 NTNPDKESRHRYIEAAKQHGVRC-IAVHMNISKEHAKHNI 368 (369)
Q Consensus 330 ~tn~~~~~r~~~~~la~~~~~~v-~~v~l~~~~e~~~~Rn 368 (369)
+...+..+...+.......+.++ .++++++|.+++.+|-
T Consensus 82 GfPRt~~Qa~~l~~~l~~~~~~~~~vi~l~v~~e~l~~Rl 121 (206)
T 3sr0_A 82 GFPRTVKQAEALDEMLEKKGLKVDHVLLFEVPDEVVIERL 121 (206)
T ss_dssp SCCCSHHHHHHHHHHHHHTTCCCCEEEEEECCHHHHHHHH
T ss_pred CCchhHHHHHHHHhhHHHhccccceeeecCCCHHHHHHHH
Confidence 99888888888877777777654 6889999999998883
No 135
>1x6v_B Bifunctional 3'-phosphoadenosine 5'- phosphosulfate synthethase 1; transferase, ATP sulfurylase, APS kinase, PAPS; HET: ADP; 1.75A {Homo sapiens} SCOP: b.122.1.3 c.26.1.5 c.37.1.4 PDB: 1xjq_B* 1xnj_B* 2qjf_A* 2ofx_A* 2ofw_A*
Probab=99.06 E-value=7.7e-10 Score=114.38 Aligned_cols=98 Identities=15% Similarity=0.219 Sum_probs=78.0
Q ss_pred ccEEEEEEcCCCCcHHHHHHHHhccC---Cc--EEEeCCcchh----------------HHHHHHHHHHHHhCCCcEEEe
Q psy4598 271 LDSVLIMIGSQGSGKSSFVSTYLKPL---NY--TTVNRDTLGS----------------WQKCVSVMKAALDSGLSVVVD 329 (369)
Q Consensus 271 ~~~lIll~G~pGSGKSTla~~L~~~~---~~--~~i~~D~~~~----------------~~~~~~~~~~~l~~g~~vIiD 329 (369)
++.+|+|+|+|||||||+|+.|++.+ ++ ..++.|.++. ++++.+.+...++.|..||.|
T Consensus 51 ~g~lIvLtGlsGSGKSTlAr~La~~L~~~G~~~v~lDgD~iR~~L~~~~~fs~~dree~~r~i~eva~~~l~~G~iVI~d 130 (630)
T 1x6v_B 51 RGCTVWLTGLSGAGKTTVSMALEEYLVCHGIPCYTLDGDNIRQGLNKNLGFSPEDREENVRRIAEVAKLFADAGLVCITS 130 (630)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEESHHHHTTTTTTTCCSSHHHHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHHHhcCCeEEEechHHhhhccCccccCChhhhHHHHHHHHHHHHHHHhCCCEEEEe
Confidence 56899999999999999999999986 54 4555555421 233444455567889888888
Q ss_pred CCCCCHHHHHHHHHHHHhcCCeEEEEEEeCCHHHHHHHc
Q psy4598 330 NTNPDKESRHRYIEAAKQHGVRCIAVHMNISKEHAKHNI 368 (369)
Q Consensus 330 ~tn~~~~~r~~~~~la~~~~~~v~~v~l~~~~e~~~~Rn 368 (369)
........|..+.+++++.+.++.+||+++|.+++.+|.
T Consensus 131 ~~s~~~~~r~~~r~ll~~~g~p~~vV~Ldap~Evl~~Rl 169 (630)
T 1x6v_B 131 FISPYTQDRNNARQIHEGASLPFFEVFVDAPLHVCEQRD 169 (630)
T ss_dssp CCCCCHHHHHHHHHHHHTTTCCEEEEEEECCHHHHHHHC
T ss_pred CchhhHHHHHHHHHHHHhCCCCeEEEEEECCHHHHHHHh
Confidence 776667788999999888888999999999999999995
No 136
>3be4_A Adenylate kinase; malaria, cryptosporidium parvum nonprotein inhibitors, nucleotide-binding, transferase; HET: AP5; 1.60A {Cryptosporidium parvum iowa II}
Probab=99.06 E-value=8.4e-10 Score=99.30 Aligned_cols=96 Identities=17% Similarity=0.185 Sum_probs=69.8
Q ss_pred EEEEEEcCCCCcHHHHHHHHhccCCcEEEeCCcchh-H----------------------H-HHHHHHHHHHh---CCCc
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTLGS-W----------------------Q-KCVSVMKAALD---SGLS 325 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~~~~~~i~~D~~~~-~----------------------~-~~~~~~~~~l~---~g~~ 325 (369)
..|+|.|+|||||||+++.|++.+++.+++.|++-. . + ...+.+...+. .+..
T Consensus 6 ~~I~l~G~~GsGKsT~a~~La~~l~~~~i~~d~li~~~~~~~t~~g~~i~~~~~~g~~~~~~~~~~~i~~~l~~~~~~~~ 85 (217)
T 3be4_A 6 HNLILIGAPGSGKGTQCEFIKKEYGLAHLSTGDMLREAIKNGTKIGLEAKSIIESGNFVGDEIVLGLVKEKFDLGVCVNG 85 (217)
T ss_dssp CEEEEEECTTSSHHHHHHHHHHHHCCEEEEHHHHHHHHHHTC--CCHHHHHHHHHTCCCCHHHHHHHHHHHHHTTTTTTC
T ss_pred eEEEEECCCCCCHHHHHHHHHHHhCceEEehhHHHHHHHHcCCHHHHHHHHHHHCCCcCCHHHHHHHHHHHHhccccCCC
Confidence 578999999999999999999999999999876511 0 0 11223333343 3778
Q ss_pred EEEeCCCCCHHHHHHHHHHHHhcCC-eEEEEEEeCCHHHHHHHc
Q psy4598 326 VVVDNTNPDKESRHRYIEAAKQHGV-RCIAVHMNISKEHAKHNI 368 (369)
Q Consensus 326 vIiD~tn~~~~~r~~~~~la~~~~~-~v~~v~l~~~~e~~~~Rn 368 (369)
||+|+...+......+.+++...+. +..+|++++|.+++.+|-
T Consensus 86 ~i~dg~~~~~~~~~~l~~~l~~~~~~~d~vi~L~~~~e~~~~Rl 129 (217)
T 3be4_A 86 FVLDGFPRTIPQAEGLAKILSEIGDSLTSVIYFEIDDSEIIERI 129 (217)
T ss_dssp EEEESCCCSHHHHHHHHHHHHHHTCCCCEEEEEECCHHHHHHHH
T ss_pred EEEeCCCCCHHHHHHHHHHHHhcCCCCCEEEEEECCHHHHHHHH
Confidence 9999876666556655555555553 447999999999999883
No 137
>3tlx_A Adenylate kinase 2; structural genomics, structural genomics consortium, SGC, RO fold, transferase, ATP binding, phosphorylation; HET: ADP ATP AMP; 2.75A {Plasmodium falciparum}
Probab=99.05 E-value=8.9e-10 Score=101.16 Aligned_cols=97 Identities=16% Similarity=0.205 Sum_probs=73.6
Q ss_pred ccEEEEEEcCCCCcHHHHHHHHhccCCcEEEeCCcc-hh-----------------------HHHHHHHHHHHHhC---C
Q psy4598 271 LDSVLIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTL-GS-----------------------WQKCVSVMKAALDS---G 323 (369)
Q Consensus 271 ~~~lIll~G~pGSGKSTla~~L~~~~~~~~i~~D~~-~~-----------------------~~~~~~~~~~~l~~---g 323 (369)
.|.+|+|+|+|||||||+++.|++.+++.+++.|++ +. .......+...+.. +
T Consensus 28 ~~~~I~l~G~~GsGKsT~a~~L~~~~g~~~is~~~~~r~~~~~~~~~g~~i~~~~~~g~~~~~~~~~~~~~~~l~~~~~~ 107 (243)
T 3tlx_A 28 PDGRYIFLGAPGSGKGTQSLNLKKSHCYCHLSTGDLLREAAEKKTELGLKIKNIINEGKLVDDQMVLSLVDEKLKTPQCK 107 (243)
T ss_dssp CCEEEEEECCTTSSHHHHHHHHHHHHCCEEEEHHHHHHHHTTSSSHHHHHHHHHHHTTCCCCHHHHHHHHHHHTTSGGGS
T ss_pred CCcEEEEECCCCCCHHHHHHHHHHHhCCeEEecHHHHHHHHhccchHHHHHHHHHhcCCCCcHHHHHHHHHHHHhccccc
Confidence 467999999999999999999999999999998765 11 11122333444433 6
Q ss_pred CcEEEeCCCCCHHHHHHHHHHHHhcCCe-EEEEEEeCCHHHHHHH
Q psy4598 324 LSVVVDNTNPDKESRHRYIEAAKQHGVR-CIAVHMNISKEHAKHN 367 (369)
Q Consensus 324 ~~vIiD~tn~~~~~r~~~~~la~~~~~~-v~~v~l~~~~e~~~~R 367 (369)
..+|+|...........+.+++...+.. -.++++++|.+++.+|
T Consensus 108 ~~~ildg~p~~~~q~~~l~~~l~~~~~~~d~vi~l~~p~e~~~~R 152 (243)
T 3tlx_A 108 KGFILDGYPRNVKQAEDLNKLLQKNQTKLDGVFYFNVPDEVLVNR 152 (243)
T ss_dssp SEEEEESCCCSHHHHHHHHHHHHHTTCCCCEEEEEECCHHHHHHH
T ss_pred CCEEecCCCCcHHHHHHHHHHHHHcCCCCceEEEEeCCHHHHHHH
Confidence 7899999777777777777766666554 3789999999999988
No 138
>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A
Probab=99.05 E-value=8e-11 Score=103.60 Aligned_cols=122 Identities=13% Similarity=0.167 Sum_probs=89.3
Q ss_pred CCceEEEEecCCceeecCCCCCCCCC-----------ccccccccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHH
Q psy4598 23 NSAKIASFDLDGTLITTKSGKVFPVD-----------THDWKLLFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRD 91 (369)
Q Consensus 23 ~~~k~~~fDlDgTLi~~~sg~~~~~~-----------~~d~~~~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~ 91 (369)
.+.+.+.+|||+||+.+........+ ..-+..+.||+.+.|++|++. |.++|+||..
T Consensus 13 ~~k~~LVLDLD~TLvhs~~~~~~~~d~~~~~~~~~~~~~~~v~~rPg~~efL~~l~~~-~~i~I~T~~~----------- 80 (181)
T 2ght_A 13 SDKICVVINLDETLVHSSFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMGEL-FECVLFTASL----------- 80 (181)
T ss_dssp TTSCEEEECCBTTTEEEESSCCSSCSEEEEEEETTEEEEEEEEECTTHHHHHHHHHHH-SEEEEECSSC-----------
T ss_pred CCCeEEEECCCCCeECCcccCCCCccceeeeeeCCeeEEEEEEeCCCHHHHHHHHHhC-CCEEEEcCCC-----------
Confidence 45789999999999987531110000 001234699999999999998 9999999953
Q ss_pred HHHHHHHHHHHcCC--CeEEEEecCCCCCCCCchhHHHHHHHHhcCCccccCCccEEeeCccccccccCCCCCCCCCccc
Q psy4598 92 FQAKAEKIIKSLNV--PVQMFVATQYDRYRKPVPGMWEYLSQEKNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTD 169 (369)
Q Consensus 92 ~~~~i~~~l~~l~i--~~~~~~~~~~~~~rKP~~gm~~~~~~~~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D 169 (369)
+..++.+++.++. .|...++.+.+...| +.+...++.+ +.++++++||||+. .+
T Consensus 81 -~~~a~~vl~~ld~~~~f~~~~~rd~~~~~k---~~~~k~L~~L----g~~~~~~vivdDs~----------------~~ 136 (181)
T 2ght_A 81 -AKYADPVADLLDKWGAFRARLFRESCVFHR---GNYVKDLSRL----GRDLRRVLILDNSP----------------AS 136 (181)
T ss_dssp -HHHHHHHHHHHCTTCCEEEEECGGGSEEET---TEEECCGGGT----CSCGGGEEEECSCG----------------GG
T ss_pred -HHHHHHHHHHHCCCCcEEEEEeccCceecC---CcEeccHHHh----CCCcceEEEEeCCH----------------HH
Confidence 3455667777776 377777766655443 5666666664 78999999999999 79
Q ss_pred HHHHHhCCCCc
Q psy4598 170 HLFAFNLNLAF 180 (369)
Q Consensus 170 ~~~A~n~Gi~f 180 (369)
+.++.++||..
T Consensus 137 ~~~~~~ngi~i 147 (181)
T 2ght_A 137 YVFHPDNAVPV 147 (181)
T ss_dssp GTTCTTSBCCC
T ss_pred hccCcCCEeEe
Confidence 99999999983
No 139
>2xb4_A Adenylate kinase; ATP-binding, nucleotide-binding, transferase; HET: SRT; 1.80A {Desulfovibrio gigas} PDB: 3l0s_A* 3l0p_A*
Probab=99.03 E-value=1.1e-09 Score=99.02 Aligned_cols=95 Identities=16% Similarity=0.269 Sum_probs=71.3
Q ss_pred EEEEEcCCCCcHHHHHHHHhccCCcEEEeCCcc-hh-----------------------HHHHHHHHHHHHhC--CCcEE
Q psy4598 274 VLIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTL-GS-----------------------WQKCVSVMKAALDS--GLSVV 327 (369)
Q Consensus 274 lIll~G~pGSGKSTla~~L~~~~~~~~i~~D~~-~~-----------------------~~~~~~~~~~~l~~--g~~vI 327 (369)
+|+|.|+|||||||+++.|++.+++.+++.|++ +. .+.....+...+.. |..||
T Consensus 2 ~I~l~G~~GsGKsT~a~~La~~lg~~~i~~dd~~r~~~~~~~~~g~~i~~~~~~g~~~~~~~~~~~i~~~l~~~~g~~vI 81 (223)
T 2xb4_A 2 NILIFGPNGSGKGTQGNLVKDKYSLAHIESGGIFREHIGGGTELGKKAKEFIDRGDLVPDDITIPMVLETLESKGKDGWL 81 (223)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHTCEEEEHHHHHHHHTTTTCHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHCTTCEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHhCCeEEchHHHHHHHHHcCCHHHHHHHHHHHcCCcCcHHHHHHHHHHHHhcccCCeEE
Confidence 689999999999999999999999999998765 21 01123345555666 88999
Q ss_pred EeCCCCCHHHHHHHHHHHHhcCC-eEEEEEEeCCHHHHHHHc
Q psy4598 328 VDNTNPDKESRHRYIEAAKQHGV-RCIAVHMNISKEHAKHNI 368 (369)
Q Consensus 328 iD~tn~~~~~r~~~~~la~~~~~-~v~~v~l~~~~e~~~~Rn 368 (369)
+|+..........+.+.+...+. +-.++++++|.+++.+|-
T Consensus 82 lDg~~~~~~~~~~l~~~~~~~~~~~d~vi~l~~~~e~~~~Rl 123 (223)
T 2xb4_A 82 LDGFPRNTVQAQKLFEALQEKGMKINFVIEILLPREVAKNRI 123 (223)
T ss_dssp EESCCCSHHHHHHHHHHHHHTTCCCCEEEEEECCHHHHHHHH
T ss_pred EeCCcCCHHHHHHHHHHHHhcCCCCCEEEEEECCHHHHHHHH
Confidence 99866666666666665555553 447899999999999883
No 140
>3kb2_A SPBC2 prophage-derived uncharacterized protein YORR; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: G3D; 2.20A {Bacillus subtilis} SCOP: c.37.1.1 PDB: 2axp_A*
Probab=99.02 E-value=1.9e-09 Score=92.42 Aligned_cols=92 Identities=14% Similarity=0.159 Sum_probs=65.5
Q ss_pred EEEEEEcCCCCcHHHHHHHHhccCCcEEEeCCcchh----HHHHHHHHHHHHhCCCcEEEeCCC---------------C
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTLGS----WQKCVSVMKAALDSGLSVVVDNTN---------------P 333 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~~~~~~i~~D~~~~----~~~~~~~~~~~l~~g~~vIiD~tn---------------~ 333 (369)
++|+|+|+|||||||+++.|++.+++.+++.|.+.. .....+ ....+..+..||.|... .
T Consensus 2 ~~i~l~G~~GsGKsT~~~~L~~~l~~~~i~~d~~~~~~~~~~~~~~-~~~~l~~~~~vi~dr~~~~~~v~~~~~~~~~~~ 80 (173)
T 3kb2_A 2 TLIILEGPDCCFKSTVAAKLSKELKYPIIKGSSFELAKSGNEKLFE-HFNKLADEDNVIIDRFVYSNLVYAKKFKDYSIL 80 (173)
T ss_dssp CEEEEECSSSSSHHHHHHHHHHHHCCCEEECCCHHHHTTCHHHHHH-HHHHHTTCCSEEEESCHHHHHHHTTTBTTCCCC
T ss_pred eEEEEECCCCCCHHHHHHHHHHHhCCeeecCcccccchhHHHHHHH-HHHHHHhCCCeEEeeeecchHHHHHHHHHhhHh
Confidence 479999999999999999999999999999998753 122222 33456778889988422 2
Q ss_pred CHHHHHHHHHHHHhcCCeEEEEEEeCCHHHHHHHc
Q psy4598 334 DKESRHRYIEAAKQHGVRCIAVHMNISKEHAKHNI 368 (369)
Q Consensus 334 ~~~~r~~~~~la~~~~~~v~~v~l~~~~e~~~~Rn 368 (369)
....+..+.. ....+..+|++++|.+++.+|.
T Consensus 81 ~~~~~~~l~~---~~~~~~~~i~l~~~~e~~~~R~ 112 (173)
T 3kb2_A 81 TERQLRFIED---KIKAKAKVVYLHADPSVIKKRL 112 (173)
T ss_dssp CHHHHHHHHH---HHTTTEEEEEEECCHHHHHHHH
T ss_pred hHHHHHHHhc---cCCCCCEEEEEeCCHHHHHHHH
Confidence 2233332222 1233556999999999999884
No 141
>1ukz_A Uridylate kinase; transferase; HET: ADP AMP; 1.90A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 1uky_A*
Probab=99.01 E-value=1.4e-09 Score=96.29 Aligned_cols=97 Identities=9% Similarity=0.171 Sum_probs=68.4
Q ss_pred ccccEEEEEEcCCCCcHHHHHHHHhccCCcEEEeCCcchh-----------------------------HHHHHHHHHHH
Q psy4598 269 AALDSVLIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTLGS-----------------------------WQKCVSVMKAA 319 (369)
Q Consensus 269 ~~~~~lIll~G~pGSGKSTla~~L~~~~~~~~i~~D~~~~-----------------------------~~~~~~~~~~~ 319 (369)
+..+.+|+|+|+|||||||+++.|++.+++.+++.|.+-. +..+.+.+...
T Consensus 12 ~~~~~~I~l~G~~GsGKsT~~~~L~~~~g~~~i~~d~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~~~~~~~l~~~i~~~ 91 (203)
T 1ukz_A 12 PDQVSVIFVLGGPGAGKGTQCEKLVKDYSFVHLSAGDLLRAEQGRAGSQYGELIKNCIKEGQIVPQEITLALLRNAISDN 91 (203)
T ss_dssp TTTCEEEEEECSTTSSHHHHHHHHHHHSSCEEEEHHHHHHHHHHSTTCSCHHHHHHHHHTTCCCCHHHHHHHHHHHHHHH
T ss_pred CCCCcEEEEECCCCCCHHHHHHHHHHHcCceEEeHHHHHHHHHhccCCHHHHHHHHHHHcCCcCCHHHHHHHHHHHHHhh
Confidence 4456899999999999999999999999999999886411 01112233445
Q ss_pred HhCC-CcEEEeCCCCCHHHHHHHHHHHHhcCCeEEEEEEeCCHHHHHHHc
Q psy4598 320 LDSG-LSVVVDNTNPDKESRHRYIEAAKQHGVRCIAVHMNISKEHAKHNI 368 (369)
Q Consensus 320 l~~g-~~vIiD~tn~~~~~r~~~~~la~~~~~~v~~v~l~~~~e~~~~Rn 368 (369)
+..| ..+|+|+.....+....+...+ ..+-.+|++++|.+++.+|-
T Consensus 92 l~~g~~~~i~dg~~~~~~~~~~~~~~~---~~~~~~i~l~~~~e~~~~Rl 138 (203)
T 1ukz_A 92 VKANKHKFLIDGFPRKMDQAISFERDI---VESKFILFFDCPEDIMLERL 138 (203)
T ss_dssp HHTTCCEEEEETCCCSHHHHHHHHHHT---CCCSEEEEEECCHHHHHHHH
T ss_pred hccCCCeEEEeCCCCCHHHHHHHHHhc---CCCCEEEEEECCHHHHHHHH
Confidence 5666 5799998766555544433322 12336899999999998873
No 142
>3trf_A Shikimate kinase, SK; amino acid biosynthesis, transferase; 2.60A {Coxiella burnetii}
Probab=99.01 E-value=5.8e-10 Score=97.22 Aligned_cols=90 Identities=19% Similarity=0.219 Sum_probs=61.8
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhccCCcEEEeCCcchh------------------HHHHHHHHHHHHhCCCcEEEeCC--
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTLGS------------------WQKCVSVMKAALDSGLSVVVDNT-- 331 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~~~~~~i~~D~~~~------------------~~~~~~~~~~~l~~g~~vIiD~t-- 331 (369)
++.|+|+|+|||||||+++.|++.+++.+++.|.+.. |+.....+...+.....+|++..
T Consensus 5 ~~~i~l~G~~GsGKst~a~~La~~l~~~~i~~d~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~vi~~gg~ 84 (185)
T 3trf_A 5 LTNIYLIGLMGAGKTSVGSQLAKLTKRILYDSDKEIEKRTGADIAWIFEMEGEAGFRRREREMIEALCKLDNIILATGGG 84 (185)
T ss_dssp CCEEEEECSTTSSHHHHHHHHHHHHCCCEEEHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCEEECCTT
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHhCCCEEEChHHHHHHcCCChhhHHHHhCHHHHHHHHHHHHHHHHhcCCcEEecCCc
Confidence 5689999999999999999999999999999998731 12222233333333345555553
Q ss_pred -CCCHHHHHHHHHHHHhcCCeEEEEEEeCCHHHHHHHc
Q psy4598 332 -NPDKESRHRYIEAAKQHGVRCIAVHMNISKEHAKHNI 368 (369)
Q Consensus 332 -n~~~~~r~~~~~la~~~~~~v~~v~l~~~~e~~~~Rn 368 (369)
......+..+ ++.+ .+||+++|.+++.+|.
T Consensus 85 ~~~~~~~~~~l----~~~~---~vi~L~~~~e~l~~Rl 115 (185)
T 3trf_A 85 VVLDEKNRQQI----SETG---VVIYLTASIDTQLKRI 115 (185)
T ss_dssp GGGSHHHHHHH----HHHE---EEEEEECCHHHHHHHH
T ss_pred eecCHHHHHHH----HhCC---cEEEEECCHHHHHHHH
Confidence 2344444433 3322 6899999999999885
No 143
>3vaa_A Shikimate kinase, SK; structural genomics, center for structural genomics of infec diseases, csgid, metal binding, transferase; 1.70A {Bacteroides thetaiotaomicron}
Probab=99.01 E-value=5.4e-10 Score=99.12 Aligned_cols=93 Identities=13% Similarity=0.126 Sum_probs=64.3
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhccCCcEEEeCCcchh------------------HHHHHHHHHHHHhCCCcEEEeCCCC
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTLGS------------------WQKCVSVMKAALDSGLSVVVDNTNP 333 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~~~~~~i~~D~~~~------------------~~~~~~~~~~~l~~g~~vIiD~tn~ 333 (369)
+++|+|+|+|||||||+++.|++.+++.+++.|.+.. ++.....+...+..+..+|++..+.
T Consensus 25 ~~~i~l~G~~GsGKsTl~~~La~~l~~~~i~~d~~~~~~~g~~i~~~~~~~~~~~~~~~e~~~l~~l~~~~~~vi~~ggg 104 (199)
T 3vaa_A 25 MVRIFLTGYMGAGKTTLGKAFARKLNVPFIDLDWYIEERFHKTVGELFTERGEAGFRELERNMLHEVAEFENVVISTGGG 104 (199)
T ss_dssp CCEEEEECCTTSCHHHHHHHHHHHHTCCEEEHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEEEECCTT
T ss_pred CCEEEEEcCCCCCHHHHHHHHHHHcCCCEEcchHHHHHHhCCcHHHHHHhcChHHHHHHHHHHHHHHhhcCCcEEECCCc
Confidence 4689999999999999999999999999999998621 1222333334445567888886554
Q ss_pred CHHHHHHHHHHHHhcCCeEEEEEEeCCHHHHHHHc
Q psy4598 334 DKESRHRYIEAAKQHGVRCIAVHMNISKEHAKHNI 368 (369)
Q Consensus 334 ~~~~r~~~~~la~~~~~~v~~v~l~~~~e~~~~Rn 368 (369)
....+..+..+ .+ ...+||+++|.+++.+|-
T Consensus 105 ~~~~~~~~~~l-~~---~~~vi~L~~~~e~l~~Rl 135 (199)
T 3vaa_A 105 APCFYDNMEFM-NR---TGKTVFLNVHPDVLFRRL 135 (199)
T ss_dssp GGGSTTHHHHH-HH---HSEEEEEECCHHHHHHHH
T ss_pred EEccHHHHHHH-Hc---CCEEEEEECCHHHHHHHH
Confidence 33222222222 22 236899999999999874
No 144
>1m8p_A Sulfate adenylyltransferase; rossmann fold, phosphosulfate binding, T-state; HET: PPS; 2.60A {Penicillium chrysogenum} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1i2d_A*
Probab=98.99 E-value=2.5e-09 Score=110.04 Aligned_cols=98 Identities=23% Similarity=0.283 Sum_probs=79.7
Q ss_pred cccEEEEEEcCCCCcHHHHHHHHhccCC------cEEEeCCcchh----------------HHHHHHHHHHHHhCCCcEE
Q psy4598 270 ALDSVLIMIGSQGSGKSSFVSTYLKPLN------YTTVNRDTLGS----------------WQKCVSVMKAALDSGLSVV 327 (369)
Q Consensus 270 ~~~~lIll~G~pGSGKSTla~~L~~~~~------~~~i~~D~~~~----------------~~~~~~~~~~~l~~g~~vI 327 (369)
..+.+|+|+|+|||||||+|+.|++.++ +.+++.|.++. ++.+...+...++.|..||
T Consensus 394 q~~~~I~l~GlsGSGKSTiA~~La~~L~~~G~~~~~~lD~D~ir~~l~~~~~f~~~er~~~i~ri~~v~~~~~~~g~~VI 473 (573)
T 1m8p_A 394 TQGFTIFLTGYMNSGKDAIARALQVTLNQQGGRSVSLLLGDTVRHELSSELGFTREDRHTNIQRIAFVATELTRAGAAVI 473 (573)
T ss_dssp TCCEEEEEECSTTSSHHHHHHHHHHHHHHHCSSCEEEEEHHHHHHHTCTTCCCSHHHHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred ccceEEEeecCCCCCHHHHHHHHHHHhcccCCceEEEECcHHHHHHhccccCCChhHHHHHHHHHHHHHHHHHhCCCEEE
Confidence 3457999999999999999999999854 57888887641 1223345667778899999
Q ss_pred EeCCCCCHHHHHHHHHHHHhcCCeEEEEEEeCCHHHHHHHc
Q psy4598 328 VDNTNPDKESRHRYIEAAKQHGVRCIAVHMNISKEHAKHNI 368 (369)
Q Consensus 328 iD~tn~~~~~r~~~~~la~~~~~~v~~v~l~~~~e~~~~Rn 368 (369)
+|..+..+..|..+++++++.+ .+.+||+++|.++|.+|.
T Consensus 474 ~~~is~~~~~R~~~r~l~~~~g-~~~~V~Lda~~ev~~~R~ 513 (573)
T 1m8p_A 474 AAPIAPYEESRKFARDAVSQAG-SFFLVHVATPLEHCEQSD 513 (573)
T ss_dssp EECCCCCHHHHHHHHHHHHTTS-EEEEEEECCCHHHHHHHC
T ss_pred EEcCCCcHHHHHHHHHHHHhcC-CeEEEEEeCCHHHHHHHh
Confidence 9988888889999988887655 688999999999999985
No 145
>2ze6_A Isopentenyl transferase; crown GALL tumor, cytokinin biosynthesis; HET: DST AMP; 2.10A {Agrobacterium tumefaciens} PDB: 2ze5_A* 2ze7_A* 2ze8_A
Probab=98.97 E-value=1.7e-09 Score=100.01 Aligned_cols=91 Identities=11% Similarity=0.122 Sum_probs=65.9
Q ss_pred EEEEEEcCCCCcHHHHHHHHhccCCcEEEeCCcchh---------------------------------H--HHHHHHHH
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTLGS---------------------------------W--QKCVSVMK 317 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~~~~~~i~~D~~~~---------------------------------~--~~~~~~~~ 317 (369)
++|+|+|+|||||||+|+.|++.+++.+++.|.+.. + ..+.+.+.
T Consensus 2 ~li~I~G~~GSGKSTla~~La~~~~~~~i~~D~~~~~~~~~~~t~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~f~~~~~ 81 (253)
T 2ze6_A 2 LLHLIYGPTCSGKTDMAIQIAQETGWPVVALDRVQCCPQIATGSGRPLESELQSTRRIYLDSRPLTEGILDAESAHRRLI 81 (253)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHHCCCEEECCSGGGCGGGTTTTTCCCGGGGTTCCEECSCCCCGGGCSCCHHHHHHHHH
T ss_pred eEEEEECCCCcCHHHHHHHHHhcCCCeEEeccHHhccCCCccccCCCCHHHHhCCCeEEEeeeccccccccHHHHHHHHH
Confidence 589999999999999999999999999999987520 1 11222222
Q ss_pred ---HHHhCCCcEEEeCCCCCHHHHHHHHHHHHh----cCCeEEEEEEeCCH-HHHHHHc
Q psy4598 318 ---AALDSGLSVVVDNTNPDKESRHRYIEAAKQ----HGVRCIAVHMNISK-EHAKHNI 368 (369)
Q Consensus 318 ---~~l~~g~~vIiD~tn~~~~~r~~~~~la~~----~~~~v~~v~l~~~~-e~~~~Rn 368 (369)
+.++.|..+|++.... ..+..+++. .++.+.++|+++|. +++.+|.
T Consensus 82 ~~i~~~~~g~~vIl~gg~~-----~~~~~~~~~~~~~~~~~~~~i~l~~~~~e~l~~Rl 135 (253)
T 2ze6_A 82 FEVDWRKSEEGLILEGGSI-----SLLNCMAKSPFWRSGFQWHVKRLRLGDSDAFLTRA 135 (253)
T ss_dssp HHHHTTTTSSEEEEEECCH-----HHHHHHHHCTTTTSSCEEEEEECCCCCHHHHHHHH
T ss_pred HHHHHHhCCCCeEEeccHH-----HHHHHHHhcccccccCceEEEEecchhHHHHHHHH
Confidence 3346788888876542 233445555 67888999999997 8888774
No 146
>3umf_A Adenylate kinase; rossmann fold, transferase; 2.05A {Schistosoma mansoni}
Probab=98.96 E-value=2.3e-09 Score=96.94 Aligned_cols=96 Identities=15% Similarity=0.346 Sum_probs=67.4
Q ss_pred cccEEEEEEcCCCCcHHHHHHHHhccCCcEEEeCCc-chh--------------H---------HHHHHHHHHHH----h
Q psy4598 270 ALDSVLIMIGSQGSGKSSFVSTYLKPLNYTTVNRDT-LGS--------------W---------QKCVSVMKAAL----D 321 (369)
Q Consensus 270 ~~~~lIll~G~pGSGKSTla~~L~~~~~~~~i~~D~-~~~--------------~---------~~~~~~~~~~l----~ 321 (369)
..+++|+|.|||||||+|.|+.|++.+++.+|+..+ ++. + +.....+.+.+ .
T Consensus 27 ~k~kiI~llGpPGsGKgTqa~~L~~~~g~~hIstGdllR~~i~~~t~lg~~~~~~~~~G~lVpde~~~~lv~~~l~~~~~ 106 (217)
T 3umf_A 27 AKAKVIFVLGGPGSGKGTQCEKLVQKFHFNHLSSGDLLRAEVQSGSPKGKELKAMMERGELVPLEVVLALLKEAMIKLVD 106 (217)
T ss_dssp TSCEEEEEECCTTCCHHHHHHHHHHHHCCEEECHHHHHHHHHTTCCHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHTT
T ss_pred cCCcEEEEECCCCCCHHHHHHHHHHHHCCceEcHHHHHHHHHHcCCchHHHHHHHHhcCCCCCHHHHHHHHHHHHhhccc
Confidence 456899999999999999999999999999999754 331 0 11122222322 3
Q ss_pred CCCcEEEeCCCCCHHHHHHHHHHHHhcCCeEEEEEEeCCHHHHHHHc
Q psy4598 322 SGLSVVVDNTNPDKESRHRYIEAAKQHGVRCIAVHMNISKEHAKHNI 368 (369)
Q Consensus 322 ~g~~vIiD~tn~~~~~r~~~~~la~~~~~~v~~v~l~~~~e~~~~Rn 368 (369)
....+|+|+.-.+..+...+.+ ...-...++++++|.+++.+|-
T Consensus 107 ~~~g~ilDGfPRt~~Qa~~l~~---~~~~~~~vi~l~v~~e~~~~Rl 150 (217)
T 3umf_A 107 KNCHFLIDGYPRELDQGIKFEK---EVCPCLCVINFDVSEEVMRKRL 150 (217)
T ss_dssp TCSEEEEETBCSSHHHHHHHHH---HTCCCSEEEEEECCHHHHHHHH
T ss_pred cccCcccccCCCcHHHHHHHHH---hCCccCEEEeccCCHHHHHHHH
Confidence 4557999998766655544433 2333446899999999999883
No 147
>2pez_A Bifunctional 3'-phosphoadenosine 5'- phosphosulfate synthetase 1 (PAPS synthetase...; NMP-kinase fold, protein in complex with nucleic acid; HET: GGZ DAT; 1.40A {Homo sapiens} PDB: 2pey_A* 2ax4_A*
Probab=98.94 E-value=7.8e-09 Score=89.75 Aligned_cols=97 Identities=15% Similarity=0.235 Sum_probs=65.1
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhccC---CcE--EEeCCcchh----------------HHHHHHHHHHHHhCCCcEEEeC
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKPL---NYT--TVNRDTLGS----------------WQKCVSVMKAALDSGLSVVVDN 330 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~~---~~~--~i~~D~~~~----------------~~~~~~~~~~~l~~g~~vIiD~ 330 (369)
..+|+|+|++||||||+++.|++.+ ++. .++.|.++. ++++...+....+.+..++.+.
T Consensus 5 g~~i~l~G~~GsGKST~~~~L~~~l~~~g~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (179)
T 2pez_A 5 GCTVWLTGLSGAGKTTVSMALEEYLVCHGIPCYTLDGDNIRQGLNKNLGFSPEDREENVRRIAEVAKLFADAGLVCITSF 84 (179)
T ss_dssp CEEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEEHHHHTTTTTTTCCSSHHHHHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred CcEEEEECCCCCCHHHHHHHHHHHHhhCCCcEEEECChHHHHHHhhccccccccHHHHHHHHHHHHHHHHHCCCEEEEec
Confidence 4689999999999999999999875 644 446554420 1222222211225564444454
Q ss_pred CCCCHHHHHHHHHHHHhcCCeEEEEEEeCCHHHHHHHc
Q psy4598 331 TNPDKESRHRYIEAAKQHGVRCIAVHMNISKEHAKHNI 368 (369)
Q Consensus 331 tn~~~~~r~~~~~la~~~~~~v~~v~l~~~~e~~~~Rn 368 (369)
..+....+..+..+++..+.+..+|++++|.+++.+|.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~e~~~~R~ 122 (179)
T 2pez_A 85 ISPYTQDRNNARQIHEGASLPFFEVFVDAPLHVCEQRD 122 (179)
T ss_dssp CCCCHHHHHHHHHHHHHTTCCEEEEEEECCHHHHHHHC
T ss_pred CCcchHHHHHHHHHhhccCCCeEEEEEeCCHHHHHHHH
Confidence 44445556666677677788889999999999999984
No 148
>1e6c_A Shikimate kinase; phosphoryl transfer, ADP, shikimate pathway, P-loop protein, transferase; 1.8A {Erwinia chrysanthemi} SCOP: c.37.1.2 PDB: 1shk_A 2shk_A*
Probab=98.94 E-value=2.3e-09 Score=92.17 Aligned_cols=90 Identities=18% Similarity=0.239 Sum_probs=60.9
Q ss_pred ccEEEEEEcCCCCcHHHHHHHHhccCCcEEEeCCcchh------------------HHHHHHHHHHHHhCCCcEEEeCCC
Q psy4598 271 LDSVLIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTLGS------------------WQKCVSVMKAALDSGLSVVVDNTN 332 (369)
Q Consensus 271 ~~~lIll~G~pGSGKSTla~~L~~~~~~~~i~~D~~~~------------------~~~~~~~~~~~l~~g~~vIiD~tn 332 (369)
|+.+|+|+|+|||||||+++.|++.+++.+++.|.+.. ++.....+...+. +..+||+...
T Consensus 1 m~~~I~l~G~~GsGKsT~a~~La~~lg~~~id~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~vi~~g~ 79 (173)
T 1e6c_A 1 MTEPIFMVGARGCGMTTVGRELARALGYEFVDTDIFMQHTSGMTVADVVAAEGWPGFRRRESEALQAVA-TPNRVVATGG 79 (173)
T ss_dssp CCCCEEEESCTTSSHHHHHHHHHHHHTCEEEEHHHHHHHHHCSCHHHHHHHHHHHHHHHHHHHHHHHHC-CSSEEEECCT
T ss_pred CCceEEEECCCCCCHHHHHHHHHHHhCCcEEcccHHHHHHhCCCHHHHHHHcCHHHHHHHHHHHHHHhh-cCCeEEECCC
Confidence 34689999999999999999999999999999987621 1111112222344 4567777542
Q ss_pred ---CCHHHHHHHHHHHHhcCCeEEEEEEeCCHHHHHHHc
Q psy4598 333 ---PDKESRHRYIEAAKQHGVRCIAVHMNISKEHAKHNI 368 (369)
Q Consensus 333 ---~~~~~r~~~~~la~~~~~~v~~v~l~~~~e~~~~Rn 368 (369)
.....+..+. .. ..+|++++|.+++.+|.
T Consensus 80 ~~~~~~~~~~~l~----~~---~~~i~l~~~~e~~~~R~ 111 (173)
T 1e6c_A 80 GMVLLEQNRQFMR----AH---GTVVYLFAPAEELALRL 111 (173)
T ss_dssp TGGGSHHHHHHHH----HH---SEEEEEECCHHHHHHHH
T ss_pred cEEeCHHHHHHHH----cC---CeEEEEECCHHHHHHHH
Confidence 2344444332 22 26899999999998884
No 149
>4gp7_A Metallophosphoesterase; polynucleotide kinase phosphatase, RNA repair, transferase; HET: ATP CIT; 2.00A {Clostridium thermocellum} PDB: 4gp6_A*
Probab=98.94 E-value=5.8e-09 Score=90.43 Aligned_cols=95 Identities=28% Similarity=0.368 Sum_probs=76.8
Q ss_pred ccEEEEEEcCCCCcHHHHHHHHhccCCcEEEeCCcch---------------hHHHHHHHHHHHHhCCCcEEEeCCCCCH
Q psy4598 271 LDSVLIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTLG---------------SWQKCVSVMKAALDSGLSVVVDNTNPDK 335 (369)
Q Consensus 271 ~~~lIll~G~pGSGKSTla~~L~~~~~~~~i~~D~~~---------------~~~~~~~~~~~~l~~g~~vIiD~tn~~~ 335 (369)
...++.|+|+|||||||+++.+.. +...++.|.++ .++.+...+...+..|..+++|+++...
T Consensus 8 ~gei~~l~G~nGsGKSTl~~~~~~--~~~~~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~s 85 (171)
T 4gp7_A 8 ELSLVVLIGSSGSGKSTFAKKHFK--PTEVISSDFCRGLMSDDENDQTVTGAAFDVLHYIVSKRLQLGKLTVVDATNVQE 85 (171)
T ss_dssp SSEEEEEECCTTSCHHHHHHHHSC--GGGEEEHHHHHHHHCSSTTCGGGHHHHHHHHHHHHHHHHHTTCCEEEESCCCSH
T ss_pred CCEEEEEECCCCCCHHHHHHHHcc--CCeEEccHHHHHHhcCcccchhhHHHHHHHHHHHHHHHHhCCCeEEEECCCCCH
Confidence 457899999999999999998653 34456666542 1344455566677889999999999999
Q ss_pred HHHHHHHHHHHhcCCeEEEEEEeCCHHHHHHH
Q psy4598 336 ESRHRYIEAAKQHGVRCIAVHMNISKEHAKHN 367 (369)
Q Consensus 336 ~~r~~~~~la~~~~~~v~~v~l~~~~e~~~~R 367 (369)
..++++..+|+.......++++|-|...+-.+
T Consensus 86 ~g~~qrv~iAral~~~p~~lllDEPt~~Ld~~ 117 (171)
T 4gp7_A 86 SARKPLIEMAKDYHCFPVAVVFNLPEKVCQER 117 (171)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEECCCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCcEEEEEEeCCHHHHHHH
Confidence 99999999999999999999999999877655
No 150
>1bif_A 6-phosphofructo-2-kinase/ fructose-2,6-bisphospha; transferase (phospho), phosphatase, hydrolase (phosp glycolysis, bifunctional enzyme; HET: AGS; 2.00A {Rattus norvegicus} SCOP: c.37.1.7 c.60.1.4 PDB: 3bif_A* 2bif_A* 1k6m_A* 1c80_A* 1c7z_A* 1c81_A* 1tip_A* 1fbt_A
Probab=98.94 E-value=3.1e-09 Score=106.76 Aligned_cols=98 Identities=17% Similarity=0.246 Sum_probs=70.0
Q ss_pred cccEEEEEEcCCCCcHHHHHHHHhccC-----CcEEEeCCcchh-------------------HH---H----HHHHHHH
Q psy4598 270 ALDSVLIMIGSQGSGKSSFVSTYLKPL-----NYTTVNRDTLGS-------------------WQ---K----CVSVMKA 318 (369)
Q Consensus 270 ~~~~lIll~G~pGSGKSTla~~L~~~~-----~~~~i~~D~~~~-------------------~~---~----~~~~~~~ 318 (369)
.++.+|+|+|+|||||||+++.|++.+ +...++.|.++. ++ . +...+..
T Consensus 37 ~~~~~IvlvGlpGsGKSTia~~La~~l~~~~~~t~~~~~d~~r~~~~g~~~~~~ifd~~g~~~~r~re~~~~~~l~~~~~ 116 (469)
T 1bif_A 37 NCPTLIVMVGLPARGKTYISKKLTRYLNFIGVPTREFNVGQYRRDMVKTYKSFEFFLPDNEEGLKIRKQCALAALNDVRK 116 (469)
T ss_dssp -CCEEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEEHHHHHHHHHCSCCCGGGGCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEECCCCCCHHHHHHHHHHHHhccCCCceEEecchhhhhhccCCCcccccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 356799999999999999999999875 344544333310 11 1 1112244
Q ss_pred HH--hCCCcEEEeCCCCCHHHHHHHHHHHHhcCCeEEEEEEeCCHHHHHHH
Q psy4598 319 AL--DSGLSVVVDNTNPDKESRHRYIEAAKQHGVRCIAVHMNISKEHAKHN 367 (369)
Q Consensus 319 ~l--~~g~~vIiD~tn~~~~~r~~~~~la~~~~~~v~~v~l~~~~e~~~~R 367 (369)
.+ ..|..+|+|++|...+.|+.|++.+++.++.+.++.+.|+...+..+
T Consensus 117 ~l~~~~G~~vV~D~tn~~~~~R~~~~~~~~~~~~~vv~l~~~~~~~~~i~~ 167 (469)
T 1bif_A 117 FLSEEGGHVAVFDATNTTRERRAMIFNFGEQNGYKTFFVESICVDPEVIAA 167 (469)
T ss_dssp HHHTTCCSEEEEESCCCSHHHHHHHHHHHHHHTCEEEEEEECCCCHHHHHH
T ss_pred HHHhCCCCEEEEeCCCCCHHHHHHHHHHHHhcCCcEEEEEEECCCHHHHHH
Confidence 44 45779999999999999999999999999888788877775444443
No 151
>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A
Probab=98.93 E-value=2.1e-10 Score=99.78 Aligned_cols=91 Identities=10% Similarity=0.020 Sum_probs=64.3
Q ss_pred ccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHcCCC--eEEEEecCC-CCCCCCchhHHHHHHH
Q psy4598 55 LFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSLNVP--VQMFVATQY-DRYRKPVPGMWEYLSQ 131 (369)
Q Consensus 55 ~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l~i~--~~~~~~~~~-~~~rKP~~gm~~~~~~ 131 (369)
++|++.+.|+.|++.|++++|+||.... .+..+ +.+|+. +..+.+.+. ....+|.+.....+++
T Consensus 80 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~------------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~l~ 146 (201)
T 4ap9_A 80 VSPEARELVETLREKGFKVVLISGSFEE------------VLEPF-KELGDEFMANRAIFEDGKFQGIRLRFRDKGEFLK 146 (201)
T ss_dssp CCHHHHHHHHHHHHTTCEEEEEEEEETT------------TSGGG-TTTSSEEEEEEEEEETTEEEEEECCSSCHHHHHG
T ss_pred CChhHHHHHHHHHHCCCeEEEEeCCcHH------------HHHHH-HHcCchhheeeEEeeCCceECCcCCccCHHHHHH
Confidence 5799999999999999999999995421 12233 556653 333333221 1114566655556665
Q ss_pred HhcCCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCc
Q psy4598 132 EKNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAF 180 (369)
Q Consensus 132 ~~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f 180 (369)
. +++++++||||+. +|+.+|+++|+.+
T Consensus 147 ~------l~~~~~i~iGD~~----------------~Di~~~~~ag~~v 173 (201)
T 4ap9_A 147 R------FRDGFILAMGDGY----------------ADAKMFERADMGI 173 (201)
T ss_dssp G------GTTSCEEEEECTT----------------CCHHHHHHCSEEE
T ss_pred h------cCcCcEEEEeCCH----------------HHHHHHHhCCceE
Confidence 4 3889999999999 8999999999985
No 152
>1ak2_A Adenylate kinase isoenzyme-2; nucleoside monophosphate kinase, phosphotransferase; 1.92A {Bos taurus} SCOP: c.37.1.1 g.41.2.1 PDB: 2ak2_A 2c9y_A*
Probab=98.92 E-value=6.7e-09 Score=94.36 Aligned_cols=96 Identities=8% Similarity=0.144 Sum_probs=68.1
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhccCCcEEEeCCcc-hh-------H----------------HHHHHHHHHHHh---CCC
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTL-GS-------W----------------QKCVSVMKAALD---SGL 324 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~~~~~~i~~D~~-~~-------~----------------~~~~~~~~~~l~---~g~ 324 (369)
+..|+|.|+|||||||+++.|++.+++.+++.|++ +. . +.....+...+. .+.
T Consensus 16 ~~~I~l~G~~GsGKsT~a~~La~~l~~~~i~~d~li~~~~~~~~~~g~~i~~~~~~g~~~~~~~~~~~i~~~l~~~~~~~ 95 (233)
T 1ak2_A 16 GVRAVLLGPPGAGKGTQAPKLAKNFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKLVSDEMVLELIEKNLETPPCKN 95 (233)
T ss_dssp CCEEEEECCTTSSHHHHHHHHHHHHTCEEEEHHHHHHHHHHHTCHHHHHHHHHHHTTCCCCHHHHHHHHHHHHTSGGGTT
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHhCCceecHHHHHHHHHHcCChhHHHHHHHHHCCCcCCHHHHHHHHHHHHhcccccC
Confidence 46899999999999999999999999999999764 21 0 001122223332 245
Q ss_pred cEEEeCCCCCHHHHHHHHHHHHhcC-CeEEEEEEeCCHHHHHHH
Q psy4598 325 SVVVDNTNPDKESRHRYIEAAKQHG-VRCIAVHMNISKEHAKHN 367 (369)
Q Consensus 325 ~vIiD~tn~~~~~r~~~~~la~~~~-~~v~~v~l~~~~e~~~~R 367 (369)
.+|+|....+......+.+++...+ .+-.+|++++|.+++.+|
T Consensus 96 g~ildg~~~~~~~~~~l~~~l~~~~~~~d~vi~L~~~~e~~~~R 139 (233)
T 1ak2_A 96 GFLLDGFPRTVRQAEMLDDLMEKRKEKLDSVIEFSIPDSLLIRR 139 (233)
T ss_dssp CEEEESCCCSHHHHHHHHHHHHHHTCCCCEEEEEECCHHHHHHH
T ss_pred cEEEeCCCCCHHHHHHHHHHHHhcCCCCCEEEEEECCHHHHHHH
Confidence 7999986656666666655555443 345799999999999988
No 153
>2bdt_A BH3686; alpha-beta protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG, function; 2.40A {Bacillus halodurans} SCOP: c.37.1.25
Probab=98.91 E-value=1.2e-08 Score=89.35 Aligned_cols=96 Identities=16% Similarity=0.219 Sum_probs=69.8
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhccCC-cEEEeCCcchh-------------------HHHHHHHHHHHHhCCCcEEEeCC
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKPLN-YTTVNRDTLGS-------------------WQKCVSVMKAALDSGLSVVVDNT 331 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~~~-~~~i~~D~~~~-------------------~~~~~~~~~~~l~~g~~vIiD~t 331 (369)
..+|+|+|+|||||||+++.|+...+ .++++.|.+.. ++.+...+...+..+..+|+|..
T Consensus 2 g~ii~l~G~~GaGKSTl~~~L~~~~~g~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ild~~ 81 (189)
T 2bdt_A 2 KKLYIITGPAGVGKSTTCKRLAAQLDNSAYIEGDIINHMVVGGYRPPWESDELLALTWKNITDLTVNFLLAQNDVVLDYI 81 (189)
T ss_dssp EEEEEEECSTTSSHHHHHHHHHHHSSSEEEEEHHHHHTTCCTTCCCGGGCHHHHHHHHHHHHHHHHHHHHTTCEEEEESC
T ss_pred CeEEEEECCCCCcHHHHHHHHhcccCCeEEEcccchhhhhccccccCccchhHHHHHHHHHHHHHHHHHhcCCcEEEeec
Confidence 46899999999999999999998765 47888776521 12233334455567778999986
Q ss_pred CCCHHHHHHHHHHHH--hcCCeEEEEEEeCCHHHHHHHc
Q psy4598 332 NPDKESRHRYIEAAK--QHGVRCIAVHMNISKEHAKHNI 368 (369)
Q Consensus 332 n~~~~~r~~~~~la~--~~~~~v~~v~l~~~~e~~~~Rn 368 (369)
. ....+..+.++++ ..+..+.++++.+|.+++.+|.
T Consensus 82 ~-~~~~~~~~~~~~~s~g~~~~~~~i~L~~~~e~l~~R~ 119 (189)
T 2bdt_A 82 A-FPDEAEALAQTVQAKVDDVEIRFIILWTNREELLRRD 119 (189)
T ss_dssp C-CHHHHHHHHHHHHHHCSSEEEEEEEEECCHHHHHHHT
T ss_pred c-CHHHHHHHHHHHHhcccCCCeEEEEEeCCHHHHHHHH
Confidence 4 5666666666644 3344677899999999999885
No 154
>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*
Probab=98.91 E-value=3.2e-10 Score=104.38 Aligned_cols=84 Identities=10% Similarity=0.088 Sum_probs=58.8
Q ss_pred cccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHcCCC--eEEEEecCCCCCCCCchhHHHHHHH
Q psy4598 54 LLFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSLNVP--VQMFVATQYDRYRKPVPGMWEYLSQ 131 (369)
Q Consensus 54 ~~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l~i~--~~~~~~~~~~~~rKP~~gm~~~~~~ 131 (369)
.++|++.+.|+.|++.|++++|+||.+ ...+..+++.+|+. |..+++.+ +........
T Consensus 144 ~~~~~~~~~l~~l~~~g~~~~i~T~~~------------~~~~~~~~~~~gl~~~f~~~~~~~-------k~~~~k~~~- 203 (280)
T 3skx_A 144 RIRPESREAISKLKAIGIKCMMLTGDN------------RFVAKWVAEELGLDDYFAEVLPHE-------KAEKVKEVQ- 203 (280)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSC------------HHHHHHHHHHHTCSEEECSCCGGG-------HHHHHHHHH-
T ss_pred CCCHhHHHHHHHHHHCCCEEEEEeCCC------------HHHHHHHHHHcCChhHhHhcCHHH-------HHHHHHHHH-
Confidence 367999999999999999999999943 23455677888874 33222221 122222222
Q ss_pred HhcCCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCcc
Q psy4598 132 EKNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFF 181 (369)
Q Consensus 132 ~~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~ 181 (369)
+.-+++||||+. .|+.+|.++|+.+.
T Consensus 204 --------~~~~~~~vGD~~----------------nDi~~~~~Ag~~va 229 (280)
T 3skx_A 204 --------QKYVTAMVGDGV----------------NDAPALAQADVGIA 229 (280)
T ss_dssp --------TTSCEEEEECTT----------------TTHHHHHHSSEEEE
T ss_pred --------hcCCEEEEeCCc----------------hhHHHHHhCCceEE
Confidence 223789999998 89999999998653
No 155
>1zd8_A GTP:AMP phosphotransferase mitochondrial; ATP:AMP phosphotransferase, myokinase, structural genomics, structural genomics consortium, SGC; 1.48A {Homo sapiens} PDB: 2ak3_A*
Probab=98.89 E-value=6.7e-09 Score=93.84 Aligned_cols=93 Identities=15% Similarity=0.139 Sum_probs=64.6
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhccCCcEEEeCCcch-hH-----------------------HHHHHHHHHHHh--CCCc
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTLG-SW-----------------------QKCVSVMKAALD--SGLS 325 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~~~~~~i~~D~~~-~~-----------------------~~~~~~~~~~l~--~g~~ 325 (369)
+.+|+|+|+|||||||+++.|++.+++.+++.|++- .. ......+.+.+. .+..
T Consensus 7 ~~~I~l~G~~GsGKsT~a~~La~~l~~~~i~~d~~~~~~~~~~~~~g~~i~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~ 86 (227)
T 1zd8_A 7 LLRAVIMGAPGSGKGTVSSRITTHFELKHLSSGDLLRDNMLRGTEIGVLAKAFIDQGKLIPDDVMTRLALHELKNLTQYS 86 (227)
T ss_dssp CCEEEEEECTTSSHHHHHHHHHHHSSSEEEEHHHHHHHHHHHTCHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHTCTTSC
T ss_pred CcEEEEECCCCCCHHHHHHHHHHHcCCeEEechHHHHHhhhcCChHHHHHHHHHHcCCcCCHHHHHHHHHHHHhcccCCC
Confidence 468999999999999999999999999999987651 10 011122333444 3678
Q ss_pred EEEeCCCCCHHHHHHHHHHHHhcCCeEEEEEEeCCHHHHHHHc
Q psy4598 326 VVVDNTNPDKESRHRYIEAAKQHGVRCIAVHMNISKEHAKHNI 368 (369)
Q Consensus 326 vIiD~tn~~~~~r~~~~~la~~~~~~v~~v~l~~~~e~~~~Rn 368 (369)
+|+|+...+......+..+ .. .-.+|++++|.+++.+|.
T Consensus 87 ~vid~~~~~~~~~~~l~~~---~~-~~~vi~L~~~~~~~~~R~ 125 (227)
T 1zd8_A 87 WLLDGFPRTLPQAEALDRA---YQ-IDTVINLNVPFEVIKQRL 125 (227)
T ss_dssp EEEESCCCSHHHHHHHHTT---SC-CCEEEEEECCHHHHHHHH
T ss_pred EEEeCCCCCHHHHHHHHHh---cC-CCEEEEEECCHHHHHHHH
Confidence 9999977654443322211 22 236899999999999884
No 156
>2iyv_A Shikimate kinase, SK; transferase, aromatic amino acid biosynthesis, P-loop kinase, metal- binding, shikimate pathway; HET: ADP; 1.35A {Mycobacterium tuberculosis} SCOP: c.37.1.2 PDB: 2iyr_A* 2iyq_A* 2iyt_A 2iyu_A* 2iys_A* 2iyw_A* 2iyx_A* 2iyy_A* 2iyz_A* 2g1k_A* 1l4y_A* 1u8a_A* 1we2_A* 1zyu_A* 2dfn_A* 2dft_A* 2g1j_A 1l4u_A* 3baf_A*
Probab=98.86 E-value=2.7e-09 Score=92.92 Aligned_cols=90 Identities=20% Similarity=0.239 Sum_probs=58.5
Q ss_pred ccEEEEEEcCCCCcHHHHHHHHhccCCcEEEeCCcchh----------H--------HHHH-HHHHHHHhCCCcEEEeCC
Q psy4598 271 LDSVLIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTLGS----------W--------QKCV-SVMKAALDSGLSVVVDNT 331 (369)
Q Consensus 271 ~~~lIll~G~pGSGKSTla~~L~~~~~~~~i~~D~~~~----------~--------~~~~-~~~~~~l~~g~~vIiD~t 331 (369)
|+++|+|+|+|||||||+|+.|++.+++.+++.|.+.. + +... ..+...+.....||.++.
T Consensus 1 M~~~I~l~G~~GsGKsT~a~~La~~lg~~~id~D~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~vi~~g~ 80 (184)
T 2iyv_A 1 MAPKAVLVGLPGSGKSTIGRRLAKALGVGLLDTDVAIEQRTGRSIADIFATDGEQEFRRIEEDVVRAALADHDGVLSLGG 80 (184)
T ss_dssp -CCSEEEECSTTSSHHHHHHHHHHHHTCCEEEHHHHHHHHHSSCHHHHHHHHCHHHHHHHHHHHHHHHHHHCCSEEECCT
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHcCCCEEeCchHHHHHcCCCHHHHHHHhChHHHHHHHHHHHHHHHhcCCeEEecCC
Confidence 34579999999999999999999999999999998631 1 1111 122333333434443332
Q ss_pred C--CCHHHHHHHHHHHHhcCCeEEEEEEeCCHHHHHHHc
Q psy4598 332 N--PDKESRHRYIEAAKQHGVRCIAVHMNISKEHAKHNI 368 (369)
Q Consensus 332 n--~~~~~r~~~~~la~~~~~~v~~v~l~~~~e~~~~Rn 368 (369)
+ ..+..|..+ + .+ .+|++++|.+++.+|.
T Consensus 81 ~~v~~~~~~~~l----~-~~---~vV~L~~~~e~~~~Rl 111 (184)
T 2iyv_A 81 GAVTSPGVRAAL----A-GH---TVVYLEISAAEGVRRT 111 (184)
T ss_dssp TGGGSHHHHHHH----T-TS---CEEEEECCHHHHHHHT
T ss_pred cEEcCHHHHHHH----c-CC---eEEEEeCCHHHHHHHH
Confidence 2 233344332 2 23 5899999999999984
No 157
>2gks_A Bifunctional SAT/APS kinase; transferase, sulfurylase; HET: ADP; 2.31A {Aquifex aeolicus}
Probab=98.86 E-value=3.4e-09 Score=108.40 Aligned_cols=96 Identities=15% Similarity=0.162 Sum_probs=77.1
Q ss_pred ccEEEEEEcCCCCcHHHHHHHHhccCC-----cEEEeCCcchh----------------HHHHHHHHHHHHhCCCcEEEe
Q psy4598 271 LDSVLIMIGSQGSGKSSFVSTYLKPLN-----YTTVNRDTLGS----------------WQKCVSVMKAALDSGLSVVVD 329 (369)
Q Consensus 271 ~~~lIll~G~pGSGKSTla~~L~~~~~-----~~~i~~D~~~~----------------~~~~~~~~~~~l~~g~~vIiD 329 (369)
.+.+|+++|+|||||||+++.|++.++ +.+++.|.++. ++.+...+...++.|..||+|
T Consensus 371 ~~~~I~l~G~~GsGKSTia~~La~~L~~~G~~~~~ld~D~ir~~l~~~~~f~~~er~~~l~~i~~~~~~~l~~G~~VI~d 450 (546)
T 2gks_A 371 QGFCVWLTGLPCAGKSTIAEILATMLQARGRKVTLLDGDVVRTHLSRGLGFSKEDRITNILRVGFVASEIVKHNGVVICA 450 (546)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEECHHHHHHHTCTTCCSSHHHHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred cceEEEccCCCCCCHHHHHHHHHHHhhhcCCeEEEECchHhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCEEEEE
Confidence 457899999999999999999998764 58889887641 123344566677889999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCCeEEEEEEeCCHHHHHHHc
Q psy4598 330 NTNPDKESRHRYIEAAKQHGVRCIAVHMNISKEHAKHNI 368 (369)
Q Consensus 330 ~tn~~~~~r~~~~~la~~~~~~v~~v~l~~~~e~~~~Rn 368 (369)
.+++.+..|..+.+++++ ..+.+|++++|.+++.+|.
T Consensus 451 ~~~~~~~~r~~~~~~l~~--~d~~vV~L~~~~e~~~~Rl 487 (546)
T 2gks_A 451 LVSPYRSARNQVRNMMEE--GKFIEVFVDAPVEVCEERD 487 (546)
T ss_dssp CCCCCHHHHHHHHTTSCT--TCEEEEEEECCGGGHHHHC
T ss_pred cCCCCHHHHHHHHHHhhc--CCEEEEEEeCCHHHHHHHh
Confidence 999888888887776654 3478999999999999996
No 158
>2pt5_A Shikimate kinase, SK; aromatic amino acid biosynthesis, P-loop kinase, SHI kinase, shikimate pathway; 2.10A {Aquifex aeolicus}
Probab=98.84 E-value=4.3e-09 Score=90.10 Aligned_cols=88 Identities=22% Similarity=0.183 Sum_probs=60.1
Q ss_pred EEEEEcCCCCcHHHHHHHHhccCCcEEEeCCcchh------------------HHHHHHHHHHHHhCCCcEEEeCC---C
Q psy4598 274 VLIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTLGS------------------WQKCVSVMKAALDSGLSVVVDNT---N 332 (369)
Q Consensus 274 lIll~G~pGSGKSTla~~L~~~~~~~~i~~D~~~~------------------~~~~~~~~~~~l~~g~~vIiD~t---n 332 (369)
.|+|+|+|||||||+++.|++.+++.+++.|.+.. ++.+...+...+.....+||++. .
T Consensus 2 ~I~l~G~~GsGKsT~a~~L~~~l~~~~i~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~Vi~~g~~~~ 81 (168)
T 2pt5_A 2 RIYLIGFMCSGKSTVGSLLSRSLNIPFYDVDEEVQKREGLSIPQIFEKKGEAYFRKLEFEVLKDLSEKENVVISTGGGLG 81 (168)
T ss_dssp EEEEESCTTSCHHHHHHHHHHHHTCCEEEHHHHHHHHHTSCHHHHHHHSCHHHHHHHHHHHHHHHTTSSSEEEECCHHHH
T ss_pred eEEEECCCCCCHHHHHHHHHHHhCCCEEECcHHHHHHcCCCHHHHHHHhChHHHHHHHHHHHHHHhccCCeEEECCCCEe
Confidence 58999999999999999999999999999988621 11222333334443446666632 2
Q ss_pred CCHHHHHHHHHHHHhcCCeEEEEEEeCCHHHHHHHc
Q psy4598 333 PDKESRHRYIEAAKQHGVRCIAVHMNISKEHAKHNI 368 (369)
Q Consensus 333 ~~~~~r~~~~~la~~~~~~v~~v~l~~~~e~~~~Rn 368 (369)
.....+..+ +.. -.+|++++|.+++.+|.
T Consensus 82 ~~~~~~~~l----~~~---~~~i~l~~~~e~~~~R~ 110 (168)
T 2pt5_A 82 ANEEALNFM----KSR---GTTVFIDIPFEVFLERC 110 (168)
T ss_dssp TCHHHHHHH----HTT---SEEEEEECCHHHHHHHC
T ss_pred CCHHHHHHH----HcC---CEEEEEECCHHHHHHHH
Confidence 344444333 222 26899999999999984
No 159
>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp}
Probab=98.84 E-value=1.5e-09 Score=101.40 Aligned_cols=107 Identities=14% Similarity=0.167 Sum_probs=75.6
Q ss_pred ccccHHHHHHHHHHC-CcEEEEEecCCCcCCC------CCCH---HHHHHHHHHHHHHcCCCeEEE------------Ee
Q psy4598 55 LFSNIESVLKQYLDD-GYKLVIFTNQGAIGRK------KMST---RDFQAKAEKIIKSLNVPVQMF------------VA 112 (369)
Q Consensus 55 ~~p~v~~~L~~L~~~-G~~i~i~TNq~gi~~~------~~~~---~~~~~~i~~~l~~l~i~~~~~------------~~ 112 (369)
.++++.+.|+.|++. |+++.+.|+...-... .... ......+..+++.+|+...+. ++
T Consensus 123 ~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 202 (289)
T 3gyg_A 123 SKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVSVNINRCNPLAGDPEDSYD 202 (289)
T ss_dssp CHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHHHTEEEEEEECCGGGTCCTTEEE
T ss_pred CHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHHcCCCEEEEEccccccCCCCceE
Confidence 467899999999987 9999999974211000 0000 112345667778888643222 22
Q ss_pred cCCCCCCCCchhHHHHHHHHhcCCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCcc
Q psy4598 113 TQYDRYRKPVPGMWEYLSQEKNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFF 181 (369)
Q Consensus 113 ~~~~~~rKP~~gm~~~~~~~~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~ 181 (369)
.+....++|++..+.++++++ ++++++++||||+. +|+.++.++|+.+.
T Consensus 203 ~~~~~~~~~k~~~~~~~~~~~----~~~~~~~~~~GDs~----------------~D~~~~~~ag~~~~ 251 (289)
T 3gyg_A 203 VDFIPIGTGKNEIVTFMLEKY----NLNTERAIAFGDSG----------------NDVRMLQTVGNGYL 251 (289)
T ss_dssp EEEEESCCSHHHHHHHHHHHH----TCCGGGEEEEECSG----------------GGHHHHTTSSEEEE
T ss_pred EEEEeCCCCHHHHHHHHHHHc----CCChhhEEEEcCCH----------------HHHHHHHhCCcEEE
Confidence 223346789999999999986 78999999999999 89999999998763
No 160
>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10
Probab=98.82 E-value=2e-08 Score=90.87 Aligned_cols=123 Identities=16% Similarity=0.119 Sum_probs=83.8
Q ss_pred ceEEEEecCCceeecCCCCCCCCCccccccccccHHHHHHHHHHCCcEEEEEecCCC-----------cCC------C--
Q psy4598 25 AKIASFDLDGTLITTKSGKVFPVDTHDWKLLFSNIESVLKQYLDDGYKLVIFTNQGA-----------IGR------K-- 85 (369)
Q Consensus 25 ~k~~~fDlDgTLi~~~sg~~~~~~~~d~~~~~p~v~~~L~~L~~~G~~i~i~TNq~g-----------i~~------~-- 85 (369)
.|+++||+||||+.+.. .+.+...++|++|+++|++++++|..+- +.. |
T Consensus 3 ~kli~~DlDGTLl~~~~------------~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~ 70 (231)
T 1wr8_A 3 IKAISIDIDGTITYPNR------------MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGA 70 (231)
T ss_dssp CCEEEEESTTTTBCTTS------------CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTE
T ss_pred eeEEEEECCCCCCCCCC------------cCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCCCeEEEeCCcE
Confidence 48999999999997532 2578899999999999999999997541 100 0
Q ss_pred -----C----CCHHHHHHH-----------------------------------HHHHHHHcCCCeEEEEecC----CCC
Q psy4598 86 -----K----MSTRDFQAK-----------------------------------AEKIIKSLNVPVQMFVATQ----YDR 117 (369)
Q Consensus 86 -----~----~~~~~~~~~-----------------------------------i~~~l~~l~i~~~~~~~~~----~~~ 117 (369)
. ...+.+++. +..+++.++-.|+++ +.. -..
T Consensus 71 i~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ei~~ 149 (231)
T 1wr8_A 71 ISYKKKRIFLASMDEEWILWNEIRKRFPNARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAV-DSGFAIHVKK 149 (231)
T ss_dssp EEETTEEEESCCCSHHHHHHHHHHHHCTTCCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEE-ECSSCEEEEC
T ss_pred EEeCCEEEEeccHHHHHHHHHHHHHhCCCceEEecCCCceeeEEEECCCCCHHHHHHHHHhcCCcEEEE-ecCcEEEEec
Confidence 0 000111111 112222222223433 221 123
Q ss_pred CCCCchhHHHHHHHHhcCCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCc
Q psy4598 118 YRKPVPGMWEYLSQEKNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAF 180 (369)
Q Consensus 118 ~rKP~~gm~~~~~~~~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f 180 (369)
.+||++.+++.+++++ ++++++++||||+. +|+.++.++|+.+
T Consensus 150 ~~~~K~~~~~~~~~~~----~~~~~~~~~iGD~~----------------nD~~~~~~ag~~v 192 (231)
T 1wr8_A 150 PWINKGSGIEKASEFL----GIKPKEVAHVGDGE----------------NDLDAFKVVGYKV 192 (231)
T ss_dssp TTCCHHHHHHHHHHHH----TSCGGGEEEEECSG----------------GGHHHHHHSSEEE
T ss_pred CCCChHHHHHHHHHHc----CCCHHHEEEECCCH----------------HHHHHHHHcCCeE
Confidence 5789999999999986 68899999999998 8999999999985
No 161
>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0
Probab=98.82 E-value=1.6e-08 Score=92.92 Aligned_cols=44 Identities=9% Similarity=0.056 Sum_probs=38.1
Q ss_pred CCCCchhHHHHHHHHhcCCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCcc
Q psy4598 118 YRKPVPGMWEYLSQEKNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFF 181 (369)
Q Consensus 118 ~rKP~~gm~~~~~~~~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~ 181 (369)
..++++..++.+++++ +++++++++|||+. +|+.++.++|+.+.
T Consensus 197 ~~~~K~~~l~~l~~~l----gi~~~~~i~~GD~~----------------NDi~m~~~ag~~va 240 (274)
T 3fzq_A 197 KDFHKGKAIKRLQERL----GVTQKETICFGDGQ----------------NDIVMFQASDVTIA 240 (274)
T ss_dssp TTCSHHHHHHHHHHHH----TCCSTTEEEECCSG----------------GGHHHHHTCSEEEE
T ss_pred CCCCHHHHHHHHHHHc----CCCHHHEEEECCCh----------------hHHHHHHhcCceEE
Confidence 3567788888889886 79999999999999 89999999997763
No 162
>1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A
Probab=98.81 E-value=3.7e-10 Score=99.82 Aligned_cols=82 Identities=9% Similarity=-0.064 Sum_probs=57.3
Q ss_pred ccccHHHHHHHHHHC-CcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCCCCCCCCchhHHHHHHHHh
Q psy4598 55 LFSNIESVLKQYLDD-GYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSLNVPVQMFVATQYDRYRKPVPGMWEYLSQEK 133 (369)
Q Consensus 55 ~~p~v~~~L~~L~~~-G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l~i~~~~~~~~~~~~~rKP~~gm~~~~~~~~ 133 (369)
++||+.+.|+.|+++ |++++|+||.+... . ....++. .+.... |+ ..+++++
T Consensus 76 ~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~----~-~~~l~~~-~l~~~~---f~------------------~~~~~~l 128 (197)
T 1q92_A 76 PLPGAVEAVKEMASLQNTDVFICTSPIKMF----K-YCPYEKY-AWVEKY---FG------------------PDFLEQI 128 (197)
T ss_dssp BCTTHHHHHHHHHHSTTEEEEEEECCCSCC----S-SHHHHHH-HHHHHH---HC------------------GGGGGGE
T ss_pred cCcCHHHHHHHHHhcCCCeEEEEeCCccch----H-HHHHHHh-chHHHh---ch------------------HHHHHHh
Confidence 689999999999999 99999999965321 1 1111111 111100 11 3455554
Q ss_pred cCCccccCCccEEeeCccccccccCCCCCCCCCccc----HHHHH-hCCCCccCc
Q psy4598 134 NGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTD----HLFAF-NLNLAFFTP 183 (369)
Q Consensus 134 ~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D----~~~A~-n~Gi~f~~p 183 (369)
++++++++||||+. .| +++|. ++|++++..
T Consensus 129 ----~~~~~~~~~vgDs~----------------~dD~~~~~~a~~~aG~~~i~~ 163 (197)
T 1q92_A 129 ----VLTRDKTVVSADLL----------------IDDRPDITGAEPTPSWEHVLF 163 (197)
T ss_dssp ----EECSCSTTSCCSEE----------------EESCSCCCCSCSSCSSEEEEE
T ss_pred ----ccCCccEEEECccc----------------ccCCchhhhcccCCCceEEEe
Confidence 78999999999998 66 99999 999998653
No 163
>2pbr_A DTMP kinase, thymidylate kinase; transferase, nucleotide biosynthesis, TMP-binding, A binding, structural genomics, NPPSFA; 1.96A {Aquifex aeolicus}
Probab=98.80 E-value=2.9e-08 Score=86.52 Aligned_cols=95 Identities=19% Similarity=0.174 Sum_probs=61.4
Q ss_pred EEEEEcCCCCcHHHHHHHHhccC---CcEEEeCCcch------hH-----------------------HHHHHHHHHHHh
Q psy4598 274 VLIMIGSQGSGKSSFVSTYLKPL---NYTTVNRDTLG------SW-----------------------QKCVSVMKAALD 321 (369)
Q Consensus 274 lIll~G~pGSGKSTla~~L~~~~---~~~~i~~D~~~------~~-----------------------~~~~~~~~~~l~ 321 (369)
+|+|+|+|||||||+++.|++.+ ++.+++.|... .. +.+.+.+...+.
T Consensus 2 ~I~l~G~~GsGKsT~~~~L~~~l~~~g~~~i~~d~~~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~~~l~~~i~~~l~ 81 (195)
T 2pbr_A 2 LIAFEGIDGSGKTTQAKKLYEYLKQKGYFVSLYREPGGTKVGEVLREILLTEELDERTELLLFEASRSKLIEEKIIPDLK 81 (195)
T ss_dssp EEEEECSTTSCHHHHHHHHHHHHHHTTCCEEEEESSCSSHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCCCchHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 68999999999999999999976 88888876421 00 111122334567
Q ss_pred CCCcEEEeCC------------CCCHHHHHHHHHHHHhcCCeEEEEEEeCCHHHHHHHc
Q psy4598 322 SGLSVVVDNT------------NPDKESRHRYIEAAKQHGVRCIAVHMNISKEHAKHNI 368 (369)
Q Consensus 322 ~g~~vIiD~t------------n~~~~~r~~~~~la~~~~~~v~~v~l~~~~e~~~~Rn 368 (369)
.|..||+|.. .........+..++.....+-.++++++|.+++.+|-
T Consensus 82 ~~~~vi~dr~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~d~vi~l~~~~e~~~~Rl 140 (195)
T 2pbr_A 82 RDKVVILDRFVLSTIAYQGYGKGLDVEFIKNLNEFATRGVKPDITLLLDIPVDIALRRL 140 (195)
T ss_dssp TTCEEEEESCHHHHHHHHTTTTCCCHHHHHHHHHHHHTTCCCSEEEEEECCHHHHHHHH
T ss_pred CCCEEEECcchhHHHHHccccCCCCHHHHHHHHHHhhcCCCCCEEEEEeCCHHHHHHHh
Confidence 8888999942 1222222222222222223557999999999999883
No 164
>1zak_A Adenylate kinase; ATP:AMP-phosphotransferase, transferase; HET: AP5; 3.50A {Zea mays} SCOP: c.37.1.1 g.41.2.1
Probab=98.78 E-value=1.4e-08 Score=91.23 Aligned_cols=94 Identities=11% Similarity=0.099 Sum_probs=61.8
Q ss_pred ccEEEEEEcCCCCcHHHHHHHHhccCCcEEEeCCcc-hh-----------HH------------HHHHHHHHHHh----C
Q psy4598 271 LDSVLIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTL-GS-----------WQ------------KCVSVMKAALD----S 322 (369)
Q Consensus 271 ~~~lIll~G~pGSGKSTla~~L~~~~~~~~i~~D~~-~~-----------~~------------~~~~~~~~~l~----~ 322 (369)
++.+|+|+|+|||||||+++.|++.+++.+++.|.+ +. .+ .....+...+. .
T Consensus 4 ~~~~I~l~G~~GsGKsT~~~~La~~l~~~~i~~d~~~~~~~~~~~~~g~~i~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 83 (222)
T 1zak_A 4 DPLKVMISGAPASGKGTQCELIKTKYQLAHISAGDLLRAEIAAGSENGKRAKEFMEKGQLVPDEIVVNMVKERLRQPDAQ 83 (222)
T ss_dssp CSCCEEEEESTTSSHHHHHHHHHHHHCCEECCHHHHHHHHHHHTCHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHSHHHH
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHhCCceecHHHHHHHHHHcCCchhHHHHHHHHcCCcCCHHHHHHHHHHHHhhcccc
Confidence 456899999999999999999999999999998765 11 00 01111222211 2
Q ss_pred CCcEEEeCCCCCHHHHHHHHHHHHhcC-CeEEEEEEeCCHHHHHHHc
Q psy4598 323 GLSVVVDNTNPDKESRHRYIEAAKQHG-VRCIAVHMNISKEHAKHNI 368 (369)
Q Consensus 323 g~~vIiD~tn~~~~~r~~~~~la~~~~-~~v~~v~l~~~~e~~~~Rn 368 (369)
+..+|+|+...+......+ ...+ .+-.+|++++|.+++.+|-
T Consensus 84 ~~~~vidg~~~~~~~~~~l----~~~~~~~~~vi~L~~~~~~~~~R~ 126 (222)
T 1zak_A 84 ENGWLLDGYPRSYSQAMAL----ETLEIRPDTFILLDVPDELLVERV 126 (222)
T ss_dssp HTCEEEESCCCSHHHHHHH----HTTTCCCSEEEEEECCHHHHHHHH
T ss_pred CCcEEEECCCCCHHHHHHH----HHcCCCCCEEEEEECCHHHHHHHH
Confidence 3467789855444333322 2222 2346899999999999883
No 165
>1via_A Shikimate kinase; structural genomics, transferase; HET: MSE; 1.57A {Campylobacter jejuni} SCOP: c.37.1.2
Probab=98.78 E-value=6.3e-09 Score=90.04 Aligned_cols=88 Identities=18% Similarity=0.239 Sum_probs=58.8
Q ss_pred EEEEEEcCCCCcHHHHHHHHhccCCcEEEeCCcchh------------------HHHHHHHHHHHHhCCCcEEEeCCCCC
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTLGS------------------WQKCVSVMKAALDSGLSVVVDNTNPD 334 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~~~~~~i~~D~~~~------------------~~~~~~~~~~~l~~g~~vIiD~tn~~ 334 (369)
+.|+|+|+|||||||+++.|++.+++.+++.|.+.. ++.....+...+.....+|+++....
T Consensus 5 ~~i~i~G~~GsGKsTla~~La~~l~~~~~d~d~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~vi~~g~~~ 84 (175)
T 1via_A 5 KNIVFIGFMGSGKSTLARALAKDLDLVFLDSDFLIEQKFNQKVSEIFEQKRENFFREQEQKMADFFSSCEKACIATGGGF 84 (175)
T ss_dssp CCEEEECCTTSCHHHHHHHHHHHHTCEEEEHHHHHHHHHTSCHHHHHHHHCHHHHHHHHHHHHHHHTTCCSEEEECCTTG
T ss_pred CEEEEEcCCCCCHHHHHHHHHHHcCCCEEcccHHHHHHcCCCHHHHHHHcCHHHHHHHHHHHHHHHHccCCEEEECCCCE
Confidence 468999999999999999999999999999998621 11112222233444556777744321
Q ss_pred HHHHHHHHHHHHhcCCeEEEEEEeCCHHHHHHHc
Q psy4598 335 KESRHRYIEAAKQHGVRCIAVHMNISKEHAKHNI 368 (369)
Q Consensus 335 ~~~r~~~~~la~~~~~~v~~v~l~~~~e~~~~Rn 368 (369)
...+. ++..+ .+||+++|.+++.+|.
T Consensus 85 ~~~~~-----l~~~~---~~i~l~~~~e~~~~R~ 110 (175)
T 1via_A 85 VNVSN-----LEKAG---FCIYLKADFEYLKKRL 110 (175)
T ss_dssp GGSTT-----GGGGC---EEEEEECCHHHHTTCC
T ss_pred ehhhH-----HhcCC---EEEEEeCCHHHHHHHH
Confidence 11111 22333 5899999999998874
No 166
>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25
Probab=98.76 E-value=8e-09 Score=87.14 Aligned_cols=69 Identities=14% Similarity=0.239 Sum_probs=50.8
Q ss_pred ceEEEEecCCceeecCCCCCCCCCccccccccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHcC
Q psy4598 25 AKIASFDLDGTLITTKSGKVFPVDTHDWKLLFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSLN 104 (369)
Q Consensus 25 ~k~~~fDlDgTLi~~~sg~~~~~~~~d~~~~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l~ 104 (369)
.|+++||+||||.... +.. .....|++.++|++|+++|+.++|+|++++ .....+...++.+|
T Consensus 3 ~k~i~~DlDGTL~~~~----~~~----i~~~~~~~~~al~~l~~~G~~iii~TgR~~---------~~~~~~~~~l~~~g 65 (142)
T 2obb_A 3 AMTIAVDFDGTIVEHR----YPR----IGEEIPFAVETLKLLQQEKHRLILWSVREG---------ELLDEAIEWCRARG 65 (142)
T ss_dssp CCEEEECCBTTTBCSC----TTS----CCCBCTTHHHHHHHHHHTTCEEEECCSCCH---------HHHHHHHHHHHTTT
T ss_pred CeEEEEECcCCCCCCC----Ccc----ccccCHHHHHHHHHHHHCCCEEEEEeCCCc---------ccHHHHHHHHHHcC
Confidence 5899999999999742 111 111468999999999999999999999764 12334556688899
Q ss_pred CCeEEE
Q psy4598 105 VPVQMF 110 (369)
Q Consensus 105 i~~~~~ 110 (369)
+++..+
T Consensus 66 i~~~~I 71 (142)
T 2obb_A 66 LEFYAA 71 (142)
T ss_dssp CCCSEE
T ss_pred CCeEEE
Confidence 876533
No 167
>3iij_A Coilin-interacting nuclear ATPase protein; alpha and beta proteins (A/B), protein binding, transferase, phosphotransferase; HET: ADP; 1.76A {Homo sapiens} SCOP: c.37.1.1 PDB: 3iik_A 3iil_A* 3iim_A* 1rkb_A
Probab=98.72 E-value=1.2e-08 Score=88.46 Aligned_cols=86 Identities=15% Similarity=0.180 Sum_probs=61.1
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhccCCcEEEeCCcch------------------hHHHHHHHHHHHHhCCCcEEEeCCCC
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTLG------------------SWQKCVSVMKAALDSGLSVVVDNTNP 333 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~~~~~~i~~D~~~------------------~~~~~~~~~~~~l~~g~~vIiD~tn~ 333 (369)
+.+|+|+|+|||||||+++.|++.+++.+++.|.+. ....+...+...+..|. +|+|..+.
T Consensus 11 ~~~i~i~G~~GsGKst~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~vv~~~~~ 89 (180)
T 3iij_A 11 LPNILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQLYDGYDEEYDCPILDEDRVVDELDNQMREGG-VIVDYHGC 89 (180)
T ss_dssp CCCEEEECSTTSSHHHHHHHHHHHHCCEEEEHHHHHHHHTCEEEEETTTTEEEECHHHHHHHHHHHHHHCC-EEEECSCC
T ss_pred CCeEEEEeCCCCCHHHHHHHHHHHhCCeEEEHHHHHhhcchhhhhhhhhcCccCChHHHHHHHHHHHhcCC-EEEEechh
Confidence 467999999999999999999999999999998751 02234555556666664 55665442
Q ss_pred CHHHHHHHHHHHHhcCCeEEEEEEeCCHHHHHHHc
Q psy4598 334 DKESRHRYIEAAKQHGVRCIAVHMNISKEHAKHNI 368 (369)
Q Consensus 334 ~~~~r~~~~~la~~~~~~v~~v~l~~~~e~~~~Rn 368 (369)
..- .. +....+||+++|.+++.+|.
T Consensus 90 ~~~---------~~-~~~~~vi~L~~~~e~l~~R~ 114 (180)
T 3iij_A 90 DFF---------PE-RWFHIVFVLRTDTNVLYERL 114 (180)
T ss_dssp TTS---------CG-GGCSEEEEEECCHHHHHHHH
T ss_pred hhc---------ch-hcCCEEEEEECCHHHHHHHH
Confidence 110 00 11336899999999999884
No 168
>1e4v_A Adenylate kinase; transferase(phosphotransferase); HET: AP5; 1.85A {Escherichia coli} SCOP: c.37.1.1 g.41.2.1 PDB: 1e4y_A* 1ake_A* 1ank_A* 2eck_A* 3hpq_A* 4ake_A 3hpr_A*
Probab=98.69 E-value=5.3e-08 Score=87.08 Aligned_cols=90 Identities=9% Similarity=0.193 Sum_probs=61.7
Q ss_pred EEEEEcCCCCcHHHHHHHHhccCCcEEEeCCcc-hh-----------------------HHHHHHHHHHHHhC---CCcE
Q psy4598 274 VLIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTL-GS-----------------------WQKCVSVMKAALDS---GLSV 326 (369)
Q Consensus 274 lIll~G~pGSGKSTla~~L~~~~~~~~i~~D~~-~~-----------------------~~~~~~~~~~~l~~---g~~v 326 (369)
.|+|.|+|||||||+++.|++.+++.+++.|++ +. .+.....+...+.. +..+
T Consensus 2 ~I~l~G~~GsGKsT~a~~L~~~~g~~~i~~d~~~r~~~~~~~~~g~~i~~~~~~g~~~~~~~~~~~i~~~l~~~~~~~~~ 81 (214)
T 1e4v_A 2 RIILLGAPVAGKGTQAQFIMEKYGIPQISTGDMLRAAVKSGSELGKQAKDIMDAGKLVTDELVIALVKERIAQEDCRNGF 81 (214)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHCCCEEEHHHHHHHHHHHTCTTTGGGHHHHHHTCCCCHHHHHHHHHHHHTSGGGGGCE
T ss_pred EEEEECCCCCCHHHHHHHHHHHhCCeEEeHHHHHHHHHHcCChHHHHHHHHHHCCCcCCHHHHHHHHHHHHhccccCCCE
Confidence 479999999999999999999999999998664 21 01122333444443 3579
Q ss_pred EEeCCCCCHHHHHHHHHHHHhcCC-eEEEEEEeCCHHHHHHH
Q psy4598 327 VVDNTNPDKESRHRYIEAAKQHGV-RCIAVHMNISKEHAKHN 367 (369)
Q Consensus 327 IiD~tn~~~~~r~~~~~la~~~~~-~v~~v~l~~~~e~~~~R 367 (369)
|+|...........+ . ..+. +-.++++++|.+++.+|
T Consensus 82 i~dg~~~~~~~~~~l---~-~~~~~~d~vi~l~~~~e~~~~R 119 (214)
T 1e4v_A 82 LLDGFPRTIPQADAM---K-EAGINVDYVLEFDVPDELIVDR 119 (214)
T ss_dssp EEESCCCSHHHHHHH---H-HTTCCCSEEEEEECCHHHHHHH
T ss_pred EEeCCCCCHHHHHHH---H-hcCCCCCEEEEEECCHHHHHHH
Confidence 999865444333322 2 2332 34689999999999988
No 169
>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A
Probab=98.69 E-value=2.6e-08 Score=90.24 Aligned_cols=43 Identities=16% Similarity=0.386 Sum_probs=36.8
Q ss_pred ceEEEEecCCceeecCCCCCCCCCccccccccccHHHHHHHHHHCCcEEEEEecC
Q psy4598 25 AKIASFDLDGTLITTKSGKVFPVDTHDWKLLFSNIESVLKQYLDDGYKLVIFTNQ 79 (369)
Q Consensus 25 ~k~~~fDlDgTLi~~~sg~~~~~~~~d~~~~~p~v~~~L~~L~~~G~~i~i~TNq 79 (369)
.|+++||+||||+.... .+-|.+.++|++|+++|++++|+|+.
T Consensus 5 ~kli~~DlDGTLl~~~~------------~i~~~~~~~l~~l~~~g~~~~i~TGr 47 (227)
T 1l6r_A 5 IRLAAIDVDGNLTDRDR------------LISTKAIESIRSAEKKGLTVSLLSGN 47 (227)
T ss_dssp CCEEEEEHHHHSBCTTS------------CBCHHHHHHHHHHHHTTCEEEEECSS
T ss_pred eEEEEEECCCCCcCCCC------------cCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 58999999999996431 25688999999999999999999984
No 170
>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A
Probab=98.69 E-value=7.8e-08 Score=88.86 Aligned_cols=43 Identities=9% Similarity=-0.038 Sum_probs=37.9
Q ss_pred CCCchhHHHHHHHHhcCCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCcc
Q psy4598 119 RKPVPGMWEYLSQEKNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFF 181 (369)
Q Consensus 119 rKP~~gm~~~~~~~~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~ 181 (369)
.++++..++.+++++ +++++++++|||+. .|+.++.++|+.+.
T Consensus 195 ~~~K~~~l~~l~~~l----gi~~~~~i~~GD~~----------------NDi~m~~~ag~~va 237 (279)
T 4dw8_A 195 GIDKALSLSVLLENI----GMTREEVIAIGDGY----------------NDLSMIKFAGMGVA 237 (279)
T ss_dssp TCCHHHHHHHHHHHH----TCCGGGEEEEECSG----------------GGHHHHHHSSEEEE
T ss_pred CCChHHHHHHHHHHc----CCCHHHEEEECCCh----------------hhHHHHHHcCcEEE
Confidence 556788999999986 79999999999999 89999999998763
No 171
>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0
Probab=98.69 E-value=3.2e-08 Score=91.52 Aligned_cols=44 Identities=27% Similarity=0.408 Sum_probs=29.8
Q ss_pred ceEEEEecCCceeecCCCCCCCCCccccccccccHHHHHHHHHHCCcEEEEEecCC
Q psy4598 25 AKIASFDLDGTLITTKSGKVFPVDTHDWKLLFSNIESVLKQYLDDGYKLVIFTNQG 80 (369)
Q Consensus 25 ~k~~~fDlDgTLi~~~sg~~~~~~~~d~~~~~p~v~~~L~~L~~~G~~i~i~TNq~ 80 (369)
.|+++||+||||+.+.. .+.+...++|++|+++|+.++++|..+
T Consensus 5 ~kli~~DlDGTLl~~~~------------~i~~~~~~al~~l~~~G~~~~iaTGR~ 48 (279)
T 3mpo_A 5 IKLIAIDIDGTLLNEKN------------ELAQATIDAVQAAKAQGIKVVLCTGRP 48 (279)
T ss_dssp CCEEEECC-----------------------CHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred eEEEEEcCcCCCCCCCC------------cCCHHHHHHHHHHHHCCCEEEEEcCCC
Confidence 68999999999997642 257889999999999999999999754
No 172
>2z0h_A DTMP kinase, thymidylate kinase; ATP-binding, nucleotide biosynthesis, nucleotide-binding, transferase, structural genomics, NPPSFA; HET: ADP TYD; 2.10A {Thermotoga maritima} PDB: 3hjn_A*
Probab=98.68 E-value=5.7e-08 Score=85.03 Aligned_cols=94 Identities=19% Similarity=0.201 Sum_probs=59.8
Q ss_pred EEEEEcCCCCcHHHHHHHHhccC---CcEEEeCCcc---------hh---------H-----------HHHHHHHHHHHh
Q psy4598 274 VLIMIGSQGSGKSSFVSTYLKPL---NYTTVNRDTL---------GS---------W-----------QKCVSVMKAALD 321 (369)
Q Consensus 274 lIll~G~pGSGKSTla~~L~~~~---~~~~i~~D~~---------~~---------~-----------~~~~~~~~~~l~ 321 (369)
+|++.|+|||||||+++.|++.+ ++.++..+.- +. + ..+.+ +..++.
T Consensus 2 ~I~l~G~~GsGKsT~~~~L~~~l~~~g~~v~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-i~~~l~ 80 (197)
T 2z0h_A 2 FITFEGIDGSGKSTQIQLLAQYLEKRGKKVILKREPGGTETGEKIRKILLEEEVTPKAELFLFLASRNLLVTE-IKQYLS 80 (197)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHHHCCC-EEEEESSCSSHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHH-HTTC--
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEeeCCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH-HHHHHh
Confidence 68999999999999999999987 7777754331 00 0 01111 233456
Q ss_pred CCCcEEEeCC------------CCCHHHHHHHHHHHHhcCCeEEEEEEeCCHHHHHHHc
Q psy4598 322 SGLSVVVDNT------------NPDKESRHRYIEAAKQHGVRCIAVHMNISKEHAKHNI 368 (369)
Q Consensus 322 ~g~~vIiD~t------------n~~~~~r~~~~~la~~~~~~v~~v~l~~~~e~~~~Rn 368 (369)
.|..||+|.. +........+...+.....+-.++++++|.+++.+|-
T Consensus 81 ~g~~vi~dr~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~l~~~~e~~~~Rl 139 (197)
T 2z0h_A 81 EGYAVLLDRYTDSSVAYQGFGRNLGKEIVEELNDFATDGLIPDLTFYIDVDVETALKRK 139 (197)
T ss_dssp --CEEEEESCHHHHHHHTTTTTCSCHHHHHHHHHHHHTTCCCSEEEEEECCHHHHHHHC
T ss_pred CCCEEEECCChhHHHHHHHhccCCCHHHHHHHHHHhcCCCCCCEEEEEeCCHHHHHHHH
Confidence 7888999943 2344444455444444445667899999999999984
No 173
>1kag_A SKI, shikimate kinase I; transferase, structural genomics, PSI, protein structure initiative; 2.05A {Escherichia coli} SCOP: c.37.1.2
Probab=98.66 E-value=4.7e-08 Score=83.91 Aligned_cols=93 Identities=14% Similarity=0.152 Sum_probs=59.3
Q ss_pred ccEEEEEEcCCCCcHHHHHHHHhccCCcEEEeCCcchh------HHHHH------------HHHHHHHhCCCcEEEeCCC
Q psy4598 271 LDSVLIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTLGS------WQKCV------------SVMKAALDSGLSVVVDNTN 332 (369)
Q Consensus 271 ~~~lIll~G~pGSGKSTla~~L~~~~~~~~i~~D~~~~------~~~~~------------~~~~~~l~~g~~vIiD~tn 332 (369)
|+.+|+|+|+|||||||+++.|+..+++.+++.|.+.. ...+. ..+...+....++|+....
T Consensus 3 ~~~~i~l~G~~GsGKSTl~~~La~~l~~~~id~d~~~~~~~~~~i~~i~~~~g~~~~~~~~~~~l~~l~~~~~~v~~~~~ 82 (173)
T 1kag_A 3 EKRNIFLVGPMGAGKSTIGRQLAQQLNMEFYDSDQEIEKRTGADVGWVFDLEGEEGFRDREEKVINELTEKQGIVLATGG 82 (173)
T ss_dssp CCCCEEEECCTTSCHHHHHHHHHHHTTCEEEEHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHTSSSEEEECCT
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHhCCCEEeccHHHHHHhCcCHHHHHHHHhHHHHHHHHHHHHHHHHhCCCeEEECCC
Confidence 34689999999999999999999999999999887521 11111 1122233345567776422
Q ss_pred CCHHHHHHHHHHHHhcCCeEEEEEEeCCHHHHHHH
Q psy4598 333 PDKESRHRYIEAAKQHGVRCIAVHMNISKEHAKHN 367 (369)
Q Consensus 333 ~~~~~r~~~~~la~~~~~~v~~v~l~~~~e~~~~R 367 (369)
. .........+++..+ .++++++|.+++.+|
T Consensus 83 ~-~~~~~~~~~~l~~~~---~~i~l~~~~~~l~~R 113 (173)
T 1kag_A 83 G-SVKSRETRNRLSARG---VVVYLETTIEKQLAR 113 (173)
T ss_dssp T-GGGSHHHHHHHHHHS---EEEECCCCHHHHHSC
T ss_pred e-EEecHHHHHHHHhCC---EEEEEeCCHHHHHHH
Confidence 1 111122223334444 378999999998876
No 174
>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A
Probab=98.66 E-value=9.4e-09 Score=95.29 Aligned_cols=108 Identities=16% Similarity=0.234 Sum_probs=73.3
Q ss_pred CCceEEEEecCCceeecCC--------CCCCCCCcccc--------ccccccHHHHHHHHHHCCcEEEEEecCCCcCCCC
Q psy4598 23 NSAKIASFDLDGTLITTKS--------GKVFPVDTHDW--------KLLFSNIESVLKQYLDDGYKLVIFTNQGAIGRKK 86 (369)
Q Consensus 23 ~~~k~~~fDlDgTLi~~~s--------g~~~~~~~~d~--------~~~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~ 86 (369)
...++++||+||||..... +..| +..+| ..++||+.+.|+.|++.|++|+|+||.+..
T Consensus 56 ~~~~avVfDIDgTlldn~~y~~~~~~~~~~f--~~~~w~~wv~~~~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~---- 129 (262)
T 3ocu_A 56 GKKKAVVADLNETMLDNSPYAGWQVQNNKPF--DGKDWTRWVDARQSRAVPGAVEFNNYVNSHNGKVFYVTNRKDS---- 129 (262)
T ss_dssp TCEEEEEECCBTTTEECHHHHHHHHHHTCCC--CHHHHHHHHHHTCCEECTTHHHHHHHHHHTTEEEEEEEEEETT----
T ss_pred CCCeEEEEECCCcCCCCchhhhhhccccccC--CHHHHHHHHHcCCCCCCccHHHHHHHHHHCCCeEEEEeCCCcc----
Confidence 4557999999999997641 2233 22222 236899999999999999999999995421
Q ss_pred CCHHHHHHHHHHHHHHcCCCe----EEEEecCCCCCCCCchhHHHHHHHHhcCCccccCCccEEeeCcc
Q psy4598 87 MSTRDFQAKAEKIIKSLNVPV----QMFVATQYDRYRKPVPGMWEYLSQEKNGDLAIDISQSFYAGDAA 151 (369)
Q Consensus 87 ~~~~~~~~~i~~~l~~l~i~~----~~~~~~~~~~~rKP~~gm~~~~~~~~~~~~~i~~~~s~~VGD~~ 151 (369)
..+......|+.+|++. .++.... ..++......+.++ +. .-+.||||..
T Consensus 130 ----~~r~~T~~~L~~lGi~~~~~~~Lilr~~----~~~K~~~r~~l~~~-----Gy--~iv~~vGD~~ 183 (262)
T 3ocu_A 130 ----TEKSGTIDDMKRLGFNGVEESAFYLKKD----KSAKAARFAEIEKQ-----GY--EIVLYVGDNL 183 (262)
T ss_dssp ----TTHHHHHHHHHHHTCSCCSGGGEEEESS----CSCCHHHHHHHHHT-----TE--EEEEEEESSG
T ss_pred ----chHHHHHHHHHHcCcCcccccceeccCC----CCChHHHHHHHHhc-----CC--CEEEEECCCh
Confidence 02344566688899985 4555433 13346677776665 12 2399999998
No 175
>1nks_A Adenylate kinase; thermophilic, transferase; HET: AMP ADP; 2.57A {Sulfolobus acidocaldarius} SCOP: c.37.1.1
Probab=98.65 E-value=2.9e-08 Score=86.40 Aligned_cols=90 Identities=12% Similarity=0.101 Sum_probs=57.1
Q ss_pred EEEEEEcCCCCcHHHHHHHHhccCC-----cEEEeCCcc-h----------hH-----------HHHH----HHHHHHH-
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKPLN-----YTTVNRDTL-G----------SW-----------QKCV----SVMKAAL- 320 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~~~-----~~~i~~D~~-~----------~~-----------~~~~----~~~~~~l- 320 (369)
++|+|+|+|||||||+++.|++.++ +.+++.|++ + .+ ..+. ..+...+
T Consensus 2 ~~I~i~G~~GsGKsT~~~~L~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~ 81 (194)
T 1nks_A 2 KIGIVTGIPGVGKSTVLAKVKEILDNQGINNKIINYGDFMLATALKLGYAKDRDEMRKLSVEKQKKLQIDAAKGIAEEAR 81 (194)
T ss_dssp EEEEEEECTTSCHHHHHHHHHHHHHTTTCCEEEEEHHHHHHHHHHTTTSCSSHHHHTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHHhcCceEEEEECChHHHHHHHhcccccchhhhhcCCHHHHHHHHHHHHHHHHHHhh
Confidence 5899999999999999999999876 788875432 1 01 1111 1123344
Q ss_pred -hCCCcEEEeCCCCCHHH--------HHHHHHHHHhcCCeEEEEEEeCCHHHHHHH
Q psy4598 321 -DSGLSVVVDNTNPDKES--------RHRYIEAAKQHGVRCIAVHMNISKEHAKHN 367 (369)
Q Consensus 321 -~~g~~vIiD~tn~~~~~--------r~~~~~la~~~~~~v~~v~l~~~~e~~~~R 367 (369)
..+..||+|........ +..+.. .. +..++++++|.+++.+|
T Consensus 82 ~~~~~~vi~d~~~~~~~~~~~~~~~~~~~~~~----~~-~~~vi~l~~~~~~~~~r 132 (194)
T 1nks_A 82 AGGEGYLFIDTHAVIRTPSGYLPGLPSYVITE----IN-PSVIFLLEADPKIILSR 132 (194)
T ss_dssp HTCSSEEEEEECSEEEETTEEEESSCHHHHHH----HC-CSEEEEEECCHHHHHHH
T ss_pred ccCCCEEEECCchhhccccccccCCCHHHHHh----cC-CCEEEEEeCCHHHHHHH
Confidence 67889999975210000 122222 11 34689999999988755
No 176
>1y63_A LMAJ004144AAA protein; structural genomics, protein structure initiative, PSI, SGPP structural genomics of pathogenic protozoa consortium; HET: ADP; 1.70A {Leishmania major} SCOP: c.37.1.1
Probab=98.65 E-value=4.5e-08 Score=85.60 Aligned_cols=91 Identities=16% Similarity=0.251 Sum_probs=60.9
Q ss_pred ccccccEEEEEEcCCCCcHHHHHHHHhcc-CCcEEEeCCcchh-------H--------------HHHHHHHHHHHhCCC
Q psy4598 267 MKAALDSVLIMIGSQGSGKSSFVSTYLKP-LNYTTVNRDTLGS-------W--------------QKCVSVMKAALDSGL 324 (369)
Q Consensus 267 ~~~~~~~lIll~G~pGSGKSTla~~L~~~-~~~~~i~~D~~~~-------~--------------~~~~~~~~~~l~~g~ 324 (369)
|.++.+..|+|+|+|||||||+++.|++. +++.+++.|.+-. + ....+.+...+..+.
T Consensus 5 ~~~~~~~~I~l~G~~GsGKSTv~~~La~~l~g~~~id~d~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~l~~~~~~~g 84 (184)
T 1y63_A 5 MEQPKGINILITGTPGTGKTSMAEMIAAELDGFQHLEVGKLVKENHFYTEYDTELDTHIIEEKDEDRLLDFMEPIMVSRG 84 (184)
T ss_dssp -CCCSSCEEEEECSTTSSHHHHHHHHHHHSTTEEEEEHHHHHHHTTCSCC------CCCCCHHHHHHHHHHHHHHHTSSS
T ss_pred cCCCCCCEEEEECCCCCCHHHHHHHHHHhcCCCEEeeHHHHHHHhhhhhhHHHHhhhcccCCCCHHHHHHHHHHHHhccC
Confidence 34455678999999999999999999999 7999999887521 0 112233344442344
Q ss_pred cEEEeCCCCCHHHHHHHHHHHHhcCCeEEEEEEeCCHHHHHHH
Q psy4598 325 SVVVDNTNPDKESRHRYIEAAKQHGVRCIAVHMNISKEHAKHN 367 (369)
Q Consensus 325 ~vIiD~tn~~~~~r~~~~~la~~~~~~v~~v~l~~~~e~~~~R 367 (369)
.+|+|..+... + ++... -.+|++++|.+++.+|
T Consensus 85 ~~vi~~~~~~~-----~----~~~~~-~~vi~l~~~~e~~~~R 117 (184)
T 1y63_A 85 NHVVDYHSSEL-----F----PERWF-HMVVVLHTSTEVLFER 117 (184)
T ss_dssp EEEEECSCCTT-----S----CGGGC-SEEEEEECCHHHHHHH
T ss_pred CEEEeCchHhh-----h----hhccC-CEEEEEECCHHHHHHH
Confidence 67788654311 1 11112 2589999999999887
No 177
>3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0
Probab=98.65 E-value=1.5e-07 Score=86.42 Aligned_cols=46 Identities=30% Similarity=0.417 Sum_probs=37.7
Q ss_pred CceEEEEecCCceeecCCCCCCCCCccccccccccHHHHHHHHHHCCcEEEEEecCC
Q psy4598 24 SAKIASFDLDGTLITTKSGKVFPVDTHDWKLLFSNIESVLKQYLDDGYKLVIFTNQG 80 (369)
Q Consensus 24 ~~k~~~fDlDgTLi~~~sg~~~~~~~~d~~~~~p~v~~~L~~L~~~G~~i~i~TNq~ 80 (369)
+.|+++||+||||+.+... .+.+...++|++|+++|++++++|..+
T Consensus 11 miKli~~DlDGTLl~~~~~-----------~i~~~~~~al~~l~~~G~~~~iaTGR~ 56 (268)
T 3r4c_A 11 MIKVLLLDVDGTLLSFETH-----------KVSQSSIDALKKVHDSGIKIVIATGRA 56 (268)
T ss_dssp CCCEEEECSBTTTBCTTTC-----------SCCHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred ceEEEEEeCCCCCcCCCCC-----------cCCHHHHHHHHHHHHCCCEEEEEcCCC
Confidence 4699999999999973211 257789999999999999999999654
No 178
>1kht_A Adenylate kinase; phosphotransferase, signaling protein, transferase; HET: AMP; 2.50A {Methanococcus voltae} SCOP: c.37.1.1 PDB: 3h86_B* 1ki9_A
Probab=98.64 E-value=1.3e-08 Score=88.59 Aligned_cols=93 Identities=12% Similarity=0.139 Sum_probs=56.4
Q ss_pred EEEEEEcCCCCcHHHHHHHHhccCC-----cEEEeCCcc-hh---------------------HHHHHHHH---HHHHhC
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKPLN-----YTTVNRDTL-GS---------------------WQKCVSVM---KAALDS 322 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~~~-----~~~i~~D~~-~~---------------------~~~~~~~~---~~~l~~ 322 (369)
.+|+|+|+|||||||+++.|++.++ +.+++.|.+ +. ...+...+ ...+..
T Consensus 4 ~~I~i~G~~GsGKsT~~~~L~~~l~~~g~~~~~i~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 83 (192)
T 1kht_A 4 KVVVVTGVPGVGSTTSSQLAMDNLRKEGVNYKMVSFGSVMFEVAKEENLVSDRDQMRKMDPETQKRIQKMAGRKIAEMAK 83 (192)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHHHTTTCCCEEEEHHHHHHHHHHHTTSCSSGGGGSSCCHHHHHHHHHHHHHHHHHHHT
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHHhcCcceEEEehHHHHHHHHhccCCCCCHHHHhcCCHHHHHHHHHHHHHHHHhhcc
Confidence 5899999999999999999999876 888986542 10 11111111 111234
Q ss_pred CCcEEEeCCCCCHHHHHHH----HHHHHhcCCeEEEEEEeCCHHHHHH
Q psy4598 323 GLSVVVDNTNPDKESRHRY----IEAAKQHGVRCIAVHMNISKEHAKH 366 (369)
Q Consensus 323 g~~vIiD~tn~~~~~r~~~----~~la~~~~~~v~~v~l~~~~e~~~~ 366 (369)
+..||+|...........+ ..+.+.....+ +|++++|.+++.+
T Consensus 84 ~~~viid~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~l~~~~~~~~~ 130 (192)
T 1kht_A 84 ESPVAVDTHSTVSTPKGYLPGLPSWVLNELNPDL-IIVVETTGDEILM 130 (192)
T ss_dssp TSCEEEECCSEEEETTEEEESSCHHHHHHHCCSE-EEEEECCHHHHHH
T ss_pred CCeEEEccceeccccccccccCcHHHHhccCCCE-EEEEeCCHHHHHH
Confidence 6689999764310000000 01122223344 9999999999985
No 179
>1zuh_A Shikimate kinase; alpha-beta protein, transferase; 1.80A {Helicobacter pylori} PDB: 1zui_A* 3hr7_A 3muf_A* 3mrs_A 3n2e_A*
Probab=98.63 E-value=4.5e-08 Score=83.90 Aligned_cols=36 Identities=31% Similarity=0.412 Sum_probs=32.3
Q ss_pred ccEEEEEEcCCCCcHHHHHHHHhccCCcEEEeCCcc
Q psy4598 271 LDSVLIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTL 306 (369)
Q Consensus 271 ~~~lIll~G~pGSGKSTla~~L~~~~~~~~i~~D~~ 306 (369)
.+..|+|+|+|||||||+++.|++.+++.+++.|.+
T Consensus 6 ~~~~i~l~G~~GsGKSTva~~La~~lg~~~id~D~~ 41 (168)
T 1zuh_A 6 HMQHLVLIGFMGSGKSSLAQELGLALKLEVLDTDMI 41 (168)
T ss_dssp --CEEEEESCTTSSHHHHHHHHHHHHTCCEEEHHHH
T ss_pred ccceEEEECCCCCCHHHHHHHHHHHhCCCEEEChHH
Confidence 456899999999999999999999999999999986
No 180
>2plr_A DTMP kinase, probable thymidylate kinase; TMP-binding, ATP-binding, structural GEN NPPSFA; HET: 1PE PGE EPE PG4; 1.60A {Sulfolobus tokodaii}
Probab=98.62 E-value=1e-07 Score=84.16 Aligned_cols=97 Identities=18% Similarity=0.079 Sum_probs=58.7
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhccCCc--EEEe-----CCcchhH--------------HHH----------HHHHHHHH
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKPLNY--TTVN-----RDTLGSW--------------QKC----------VSVMKAAL 320 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~~~~--~~i~-----~D~~~~~--------------~~~----------~~~~~~~l 320 (369)
+.+|+|.|+|||||||+++.|++.++. .++. .+.++.+ ..+ .+.+..++
T Consensus 4 ~~~I~i~G~~GsGKsT~~~~L~~~l~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~i~~~l 83 (213)
T 2plr_A 4 GVLIAFEGIDGSGKSSQATLLKDWIELKRDVYLTEWNSSDWIHDIIKEAKKKDLLTPLTFSLIHATDFSDRYERYILPML 83 (213)
T ss_dssp CEEEEEECCTTSSHHHHHHHHHHHHTTTSCEEEEETTCCCHHHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTHHHHH
T ss_pred CeEEEEEcCCCCCHHHHHHHHHHHHhhcCCEEEecCCcHHHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 478999999999999999999997654 1232 1212110 000 01123456
Q ss_pred hCCCcEEEeCCCCCHHH--------HHHHHHHHHhcCCeEEEEEEeCCHHHHHHHc
Q psy4598 321 DSGLSVVVDNTNPDKES--------RHRYIEAAKQHGVRCIAVHMNISKEHAKHNI 368 (369)
Q Consensus 321 ~~g~~vIiD~tn~~~~~--------r~~~~~la~~~~~~v~~v~l~~~~e~~~~Rn 368 (369)
..|..||+|....+... +..+..+......+-.++++++|.+++.+|.
T Consensus 84 ~~g~~vi~D~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~vi~l~~~~e~~~~Rl 139 (213)
T 2plr_A 84 KSGFIVISDRYIYTAYARDSVRGVDIDWVKKLYSFAIKPDITFYIRVSPDIALERI 139 (213)
T ss_dssp HTTCEEEEESCHHHHHHHHHTTTCCHHHHHHHTTTSCCCSEEEEEECCHHHHHHHH
T ss_pred hCCCEEEEeCcHhHHHHHHHhhCCCHHHHHHHHhcCCCCCEEEEEeCCHHHHHHHH
Confidence 67889999976432211 1122233222233446899999999999884
No 181
>2qor_A Guanylate kinase; phosphotransferase, purine metabolism, structural genomics, structural genomics of pathogenic protozoa consortium; HET: 5GP POP; 1.80A {Plasmodium vivax}
Probab=98.62 E-value=3.8e-08 Score=87.44 Aligned_cols=90 Identities=17% Similarity=0.213 Sum_probs=58.6
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhccCC-----------------------cEEEeCCcchhH-----------------HH
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKPLN-----------------------YTTVNRDTLGSW-----------------QK 311 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~~~-----------------------~~~i~~D~~~~~-----------------~~ 311 (369)
+.+|+|+|+|||||||+++.|++.++ +.+++.|.+... ..
T Consensus 12 ~~~i~l~G~sGsGKsTl~~~L~~~~~~~~~~~~~~ttR~~~~~e~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (204)
T 2qor_A 12 IPPLVVCGPSGVGKGTLIKKVLSEFPSRFRFSISCTTRNKREKETNGVDYYFVDKDDFERKLKEGQFLEFDKYANNFYGT 91 (204)
T ss_dssp CCCEEEECCTTSCHHHHHHHHHHHCTTTEEECCEEECSCCCTTCCBTTTEEECCHHHHHHHHHTTCEEEEEEETTEEEEE
T ss_pred CCEEEEECCCCCCHHHHHHHHHHhCccceeeeeeecCCCCCCCCCCCcceeeCCHHHHHHHHHcCCCEEeHHhCCCeecC
Confidence 46899999999999999999998763 222333333210 00
Q ss_pred HHHHHHHHHhCCCcEEEeCCCCCHHHHHHHHHHHHhcCC--eEEEEEEe-CCHHHHHHHc
Q psy4598 312 CVSVMKAALDSGLSVVVDNTNPDKESRHRYIEAAKQHGV--RCIAVHMN-ISKEHAKHNI 368 (369)
Q Consensus 312 ~~~~~~~~l~~g~~vIiD~tn~~~~~r~~~~~la~~~~~--~v~~v~l~-~~~e~~~~Rn 368 (369)
....+...++.|..||+|... +....+ ++... ...+||++ +|.+++.+|-
T Consensus 92 ~~~~i~~~l~~g~~vi~d~~~---~~~~~l----~~~~~~~~~~~i~l~~~s~e~l~~Rl 144 (204)
T 2qor_A 92 LKSEYDLAVGEGKICLFEMNI---NGVKQL----KESKHIQDGIYIFVKPPSIDILLGRL 144 (204)
T ss_dssp EHHHHHHHHHTTCEEEEECCH---HHHHHH----HHCSSCSCCEEEEEECSCHHHHHHHH
T ss_pred CHHHHHHHHHcCCeEEEEECH---HHHHHH----HHhcCCCCeEEEEEcCCCHHHHHHHH
Confidence 123456677899999999643 222222 22222 45788998 8999998873
No 182
>3cr8_A Sulfate adenylyltranferase, adenylylsulfate kinase; APS kinase, transferase, sulfate metabolism, nucleotide 2 kinase; 2.95A {Thiobacillus denitrificans}
Probab=98.61 E-value=8.3e-08 Score=98.17 Aligned_cols=97 Identities=14% Similarity=0.182 Sum_probs=63.4
Q ss_pred ccEEEEEEcCCCCcHHHHHHHHhccCC------cEEEeCCcchh----------------HHHHHHHHHHHHhCCCcEEE
Q psy4598 271 LDSVLIMIGSQGSGKSSFVSTYLKPLN------YTTVNRDTLGS----------------WQKCVSVMKAALDSGLSVVV 328 (369)
Q Consensus 271 ~~~lIll~G~pGSGKSTla~~L~~~~~------~~~i~~D~~~~----------------~~~~~~~~~~~l~~g~~vIi 328 (369)
...+|+|+|++||||||+++.|+..++ +.+++.|.++. ++.+...++.....+..+|.
T Consensus 368 ~G~iI~LiG~sGSGKSTLar~La~~L~~~~G~~i~~lDgD~~~~~l~~~l~f~~~~r~~~~r~i~~v~q~l~~~~~ivi~ 447 (552)
T 3cr8_A 368 QGFTVFFTGLSGAGKSTLARALAARLMEMGGRCVTLLDGDIVRRHLSSELGFSKAHRDVNVRRIGFVASEITKNRGIAIC 447 (552)
T ss_dssp SCEEEEEEESSCHHHHHHHHHHHHHHHTTCSSCEEEESSHHHHHHTTSSCCCSHHHHHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred cceEEEEECCCCChHHHHHHHHHHhhcccCCceEEEECCcHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHhcCCEEEE
Confidence 347899999999999999999998752 45688887632 11222233344445655665
Q ss_pred eCCCCCHHHHHHHHHHHHhcCCeEEEEEEeCCHHHHHHHc
Q psy4598 329 DNTNPDKESRHRYIEAAKQHGVRCIAVHMNISKEHAKHNI 368 (369)
Q Consensus 329 D~tn~~~~~r~~~~~la~~~~~~v~~v~l~~~~e~~~~Rn 368 (369)
.........|....++++..+ .+..||+++|.++|.+|.
T Consensus 448 ~~~~~~~~~r~~~r~lL~~~g-~f~~V~L~~~~e~~~~R~ 486 (552)
T 3cr8_A 448 APIAPYRQTRRDVRAMIEAVG-GFVEIHVATPIETCESRD 486 (552)
T ss_dssp CCCCCCHHHHHHHHHHHHTTS-EEEEEEECC---------
T ss_pred ecCCccHHHHHHHHHHHHHcC-CEEEEEEcCCHHHHHHhc
Confidence 555555778888888888877 789999999999999885
No 183
>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0
Probab=98.58 E-value=1.5e-07 Score=87.43 Aligned_cols=44 Identities=14% Similarity=0.370 Sum_probs=37.4
Q ss_pred ceEEEEecCCceeecCCCCCCCCCccccccccccHHHHHHHHHHCCcEEEEEecCC
Q psy4598 25 AKIASFDLDGTLITTKSGKVFPVDTHDWKLLFSNIESVLKQYLDDGYKLVIFTNQG 80 (369)
Q Consensus 25 ~k~~~fDlDgTLi~~~sg~~~~~~~~d~~~~~p~v~~~L~~L~~~G~~i~i~TNq~ 80 (369)
.|+++|||||||+.+.. .+.+...++|++|+++|+.++++|..+
T Consensus 6 ~kli~fDlDGTLl~~~~------------~i~~~~~~al~~l~~~G~~~~iaTGR~ 49 (290)
T 3dnp_A 6 KQLLALNIDGALLRSNG------------KIHQATKDAIEYVKKKGIYVTLVTNRH 49 (290)
T ss_dssp CCEEEECCCCCCSCTTS------------CCCHHHHHHHHHHHHTTCEEEEBCSSC
T ss_pred ceEEEEcCCCCCCCCCC------------ccCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 58999999999997642 257889999999999999999998654
No 184
>3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans}
Probab=98.58 E-value=1e-07 Score=89.62 Aligned_cols=45 Identities=27% Similarity=0.456 Sum_probs=37.0
Q ss_pred CceEEEEecCCceeecCCCCCCCCCcccccccccc-HHHHHHHHHHCCcEEEEEecCC
Q psy4598 24 SAKIASFDLDGTLITTKSGKVFPVDTHDWKLLFSN-IESVLKQYLDDGYKLVIFTNQG 80 (369)
Q Consensus 24 ~~k~~~fDlDgTLi~~~sg~~~~~~~~d~~~~~p~-v~~~L~~L~~~G~~i~i~TNq~ 80 (369)
+.|+++||+||||+.+.. .+.+. ..++|++|+++|+.++++|..+
T Consensus 36 ~iKli~fDlDGTLld~~~------------~i~~~~~~~al~~l~~~G~~~~iaTGR~ 81 (304)
T 3l7y_A 36 SVKVIATDMDGTFLNSKG------------SYDHNRFQRILKQLQERDIRFVVASSNP 81 (304)
T ss_dssp CCSEEEECCCCCCSCTTS------------CCCHHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred eeEEEEEeCCCCCCCCCC------------ccCHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 469999999999997643 14566 7899999999999999999754
No 185
>2wwf_A Thymidilate kinase, putative; transferase, malaria; HET: TMP ADP; 1.89A {Plasmodium falciparum} PDB: 2wwg_A* 2wwh_A* 2wwi_A*
Probab=98.57 E-value=1.4e-08 Score=90.08 Aligned_cols=97 Identities=16% Similarity=0.156 Sum_probs=57.7
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhccCCcEEEeCCcc-------------hh------------HHHHH--------HHHHH
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTL-------------GS------------WQKCV--------SVMKA 318 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~~~~~~i~~D~~-------------~~------------~~~~~--------~~~~~ 318 (369)
+.+|+|+|+|||||||+++.|++.++..+++.|.+ +. ...+. +.+..
T Consensus 10 ~~~I~l~G~~GsGKST~~~~L~~~l~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 89 (212)
T 2wwf_A 10 GKFIVFEGLDRSGKSTQSKLLVEYLKNNNVEVKHLYFPNRETGIGQIISKYLKMENSMSNETIHLLFSANRWEHMNEIKS 89 (212)
T ss_dssp SCEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEESSCTTSHHHHHHHHHHTTSSCCCHHHHHHHHHHHHHTTHHHHHH
T ss_pred CCEEEEEcCCCCCHHHHHHHHHHHHHHcCCcEEEEecCCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 47999999999999999999998754322222111 00 00111 12345
Q ss_pred HHhCCCcEEEeCCCCCHH----HH----HHHHH-HHHhcCCeEEEEEEeCCHHHHHHHc
Q psy4598 319 ALDSGLSVVVDNTNPDKE----SR----HRYIE-AAKQHGVRCIAVHMNISKEHAKHNI 368 (369)
Q Consensus 319 ~l~~g~~vIiD~tn~~~~----~r----~~~~~-la~~~~~~v~~v~l~~~~e~~~~Rn 368 (369)
.+..+..||+|....+.. .+ ..++. +......+-.+|++++|.+++.+|.
T Consensus 90 ~l~~~~~vi~D~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~vi~l~~~~e~~~~Rl 148 (212)
T 2wwf_A 90 LLLKGIWVVCDRYAYSGVAYSSGALNLNKTWCMNPDQGLIKPDVVFYLNVPPNYAQNRS 148 (212)
T ss_dssp HHHHTCEEEEECCHHHHHHHHHHHSCCCHHHHHGGGTTSBCCSEEEEEECCTTGGGGST
T ss_pred HHhCCCEEEEecchhhHHHHHHhccCCCHHHHHHHhhCCCCCCEEEEEeCCHHHHHHhh
Confidence 566788899997653211 11 11211 1121223456899999999998874
No 186
>1nn5_A Similar to deoxythymidylate kinase (thymidylate K; P-loop, D4TMP, transferase; HET: 2DT ANP; 1.50A {Homo sapiens} SCOP: c.37.1.1 PDB: 1e2e_A* 1e2d_A* 1e2g_A* 1e2q_A* 1e99_A* 1e9a_A* 1e9b_A* 1nmx_A* 1nmz_A* 1nn0_A* 1nn1_A* 1e2f_A* 1nn3_A* 2xx3_A* 1e9c_A* 1e9d_A* 1e9e_A* 1e98_A* 1nmy_A* 1e9f_A*
Probab=98.57 E-value=5.1e-08 Score=86.56 Aligned_cols=97 Identities=16% Similarity=0.184 Sum_probs=56.2
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhccCC-----cEEEeCCc--------chh----------H--HHH--------HHHHHH
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKPLN-----YTTVNRDT--------LGS----------W--QKC--------VSVMKA 318 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~~~-----~~~i~~D~--------~~~----------~--~~~--------~~~~~~ 318 (369)
+.+|+|+|+|||||||+++.|++.++ +..+.... ++. + ..+ ...+..
T Consensus 9 ~~~I~l~G~~GsGKsT~~~~L~~~l~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~r~~~~~~i~~ 88 (215)
T 1nn5_A 9 GALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVEDHSVHLLFSANRWEQVPLIKE 88 (215)
T ss_dssp CCEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEESSCTTSHHHHHHHHHHTTSSCCCHHHHHHHHHHHHHTTHHHHHH
T ss_pred CcEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEeeCCCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 57999999999999999999998642 22222110 110 0 000 013445
Q ss_pred HHhCCCcEEEeCCCCCHH---------HHHHHHHHHHhcCCeEEEEEEeCCHHHHHHHc
Q psy4598 319 ALDSGLSVVVDNTNPDKE---------SRHRYIEAAKQHGVRCIAVHMNISKEHAKHNI 368 (369)
Q Consensus 319 ~l~~g~~vIiD~tn~~~~---------~r~~~~~la~~~~~~v~~v~l~~~~e~~~~Rn 368 (369)
.+..|..||+|....+.. .+..+..+......+-.+|++++|.+++.+|.
T Consensus 89 ~l~~~~~vi~dr~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~d~vi~l~~~~e~~~~Rl 147 (215)
T 1nn5_A 89 KLSQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQPDVGLPKPDLVLFLQLQLADAAKRG 147 (215)
T ss_dssp HHHTTCEEEEESCHHHHHHHHHTSTTCCHHHHHGGGTTSBCCSEEEEEECCHHHHHHC-
T ss_pred HHHCCCEEEEeCCcccHHHHHhhcCCCCHHHHHHHHhCCCCCCEEEEEeCCHHHHHHHh
Confidence 567888899995421100 01222222222223456899999999999884
No 187
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I
Probab=98.55 E-value=2.1e-07 Score=86.97 Aligned_cols=105 Identities=15% Similarity=0.147 Sum_probs=75.2
Q ss_pred ceEEEEecCCceeecCCCCCCCCCccccccccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHcC
Q psy4598 25 AKIASFDLDGTLITTKSGKVFPVDTHDWKLLFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSLN 104 (369)
Q Consensus 25 ~k~~~fDlDgTLi~~~sg~~~~~~~~d~~~~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l~ 104 (369)
.+++++|.|+++..... .. ..++|++.+.|+.|+++|++++|+||.+ ...+..+++.+|
T Consensus 143 ~~~i~~~~d~~~~~~~~--------~~-~~~~~g~~~~l~~L~~~g~~~~i~T~~~------------~~~~~~~l~~~g 201 (287)
T 3a1c_A 143 KTAVIVARNGRVEGIIA--------VS-DTLKESAKPAVQELKRMGIKVGMITGDN------------WRSAEAISRELN 201 (287)
T ss_dssp CEEEEEEETTEEEEEEE--------EE-CCBCTTHHHHHHHHHHTTCEEEEECSSC------------HHHHHHHHHHHT
T ss_pred CeEEEEEECCEEEEEEE--------ec-cccchhHHHHHHHHHHCCCeEEEEeCCC------------HHHHHHHHHHhC
Confidence 46889999998764310 11 1379999999999999999999999953 233556677788
Q ss_pred CCeEEEEecCCCCCCCCchhHHHHHHHHhcCCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCc
Q psy4598 105 VPVQMFVATQYDRYRKPVPGMWEYLSQEKNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAF 180 (369)
Q Consensus 105 i~~~~~~~~~~~~~rKP~~gm~~~~~~~~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f 180 (369)
+.- ++.. -.|.+ ...+++.+ +.+ ++++||||+. .|+.+|+++|+..
T Consensus 202 l~~--~f~~-----i~~~~--K~~~~~~l----~~~-~~~~~vGDs~----------------~Di~~a~~ag~~v 247 (287)
T 3a1c_A 202 LDL--VIAE-----VLPHQ--KSEEVKKL----QAK-EVVAFVGDGI----------------NDAPALAQADLGI 247 (287)
T ss_dssp CSE--EECS-----CCTTC--HHHHHHHH----TTT-CCEEEEECTT----------------TCHHHHHHSSEEE
T ss_pred Cce--eeee-----cChHH--HHHHHHHH----hcC-CeEEEEECCH----------------HHHHHHHHCCeeE
Confidence 741 1111 01222 25667765 566 9999999998 8999999999973
No 188
>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}
Probab=98.54 E-value=3.4e-08 Score=91.42 Aligned_cols=106 Identities=16% Similarity=0.230 Sum_probs=69.9
Q ss_pred ceEEEEecCCceeecC--------CCCCCCCCcccc--------ccccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCC
Q psy4598 25 AKIASFDLDGTLITTK--------SGKVFPVDTHDW--------KLLFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMS 88 (369)
Q Consensus 25 ~k~~~fDlDgTLi~~~--------sg~~~~~~~~d~--------~~~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~ 88 (369)
.++++||+||||.... .++.|. +..| ..++||+.+.|+.|++.|++|+|+||.+..
T Consensus 58 ~~avVfDIDgTlldn~~y~~~~~~~~~~f~--~~~w~~wv~~g~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~------ 129 (260)
T 3pct_A 58 KKAVVVDLDETMIDNSAYAGWQVQSGQGFS--PKTWTKWVDARQSAAIPGAVEFSNYVNANGGTMFFVSNRRDD------ 129 (260)
T ss_dssp CEEEEECCBTTTEECHHHHHHHHHHTCCCC--HHHHHHHHHTTCCEECTTHHHHHHHHHHTTCEEEEEEEEETT------
T ss_pred CCEEEEECCccCcCChhHHHhhcccCCCCC--HHHHHHHHHcCCCCCCccHHHHHHHHHHCCCeEEEEeCCCcc------
Confidence 3599999999999763 122232 1111 236899999999999999999999995421
Q ss_pred HHHHHHHHHHHHHHcCCCe----EEEEecCCCCCCCCchhHHHHHHHHhcCCccccCCccEEeeCcc
Q psy4598 89 TRDFQAKAEKIIKSLNVPV----QMFVATQYDRYRKPVPGMWEYLSQEKNGDLAIDISQSFYAGDAA 151 (369)
Q Consensus 89 ~~~~~~~i~~~l~~l~i~~----~~~~~~~~~~~rKP~~gm~~~~~~~~~~~~~i~~~~s~~VGD~~ 151 (369)
..+......|+.+|++. .++.... ..........+.+. + ..-+.||||..
T Consensus 130 --~~r~~T~~~L~~lGi~~~~~~~Lilr~~----~~~K~~~r~~L~~~-----g--y~iv~~iGD~~ 183 (260)
T 3pct_A 130 --VEKAGTVDDMKRLGFTGVNDKTLLLKKD----KSNKSVRFKQVEDM-----G--YDIVLFVGDNL 183 (260)
T ss_dssp --TSHHHHHHHHHHHTCCCCSTTTEEEESS----CSSSHHHHHHHHTT-----T--CEEEEEEESSG
T ss_pred --ccHHHHHHHHHHcCcCccccceeEecCC----CCChHHHHHHHHhc-----C--CCEEEEECCCh
Confidence 02344566688899974 2555442 12235555555542 1 23399999998
No 189
>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}
Probab=98.53 E-value=3.1e-07 Score=85.49 Aligned_cols=46 Identities=26% Similarity=0.377 Sum_probs=37.5
Q ss_pred CCceEEEEecCCceeecCCCCCCCCCccccccccccHHHHHHHHHHCCcEEEEEecCC
Q psy4598 23 NSAKIASFDLDGTLITTKSGKVFPVDTHDWKLLFSNIESVLKQYLDDGYKLVIFTNQG 80 (369)
Q Consensus 23 ~~~k~~~fDlDgTLi~~~sg~~~~~~~~d~~~~~p~v~~~L~~L~~~G~~i~i~TNq~ 80 (369)
.+.|+++||+||||+.+.. .+.+...++|++|+++|++++|+|..+
T Consensus 19 ~~~kli~~DlDGTLl~~~~------------~i~~~~~~al~~l~~~G~~v~iaTGR~ 64 (285)
T 3pgv_A 19 GMYQVVASDLDGTLLSPDH------------FLTPYAKETLKLLTARGINFVFATGRH 64 (285)
T ss_dssp --CCEEEEECCCCCSCTTS------------CCCHHHHHHHHHHHTTTCEEEEECSSC
T ss_pred CcceEEEEeCcCCCCCCCC------------cCCHHHHHHHHHHHHCCCEEEEEcCCC
Confidence 4569999999999997542 257789999999999999999999754
No 190
>4eaq_A DTMP kinase, thymidylate kinase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, MTBI, transferase; HET: ATM; 1.85A {Staphylococcus aureus subsp} PDB: 4dwj_A* 4f4i_A
Probab=98.52 E-value=2.5e-07 Score=84.06 Aligned_cols=98 Identities=20% Similarity=0.274 Sum_probs=65.5
Q ss_pred ccEEEEEEcCCCCcHHHHHHHHhccCC--cEEEeCCc---------chh----------HHH-H-H--H-------HHHH
Q psy4598 271 LDSVLIMIGSQGSGKSSFVSTYLKPLN--YTTVNRDT---------LGS----------WQK-C-V--S-------VMKA 318 (369)
Q Consensus 271 ~~~lIll~G~pGSGKSTla~~L~~~~~--~~~i~~D~---------~~~----------~~~-~-~--~-------~~~~ 318 (369)
+..+|++.|+|||||||+++.|++.++ ..++.... ++. +.. + . . .+..
T Consensus 25 ~g~~i~i~G~~GsGKsT~~~~l~~~l~~~~~~~~~~~p~~~~~g~~i~~~~~~~~~~~~~~~~ll~~a~r~~~~~~~i~~ 104 (229)
T 4eaq_A 25 MSAFITFEGPEGSGKTTVINEVYHRLVKDYDVIMTREPGGVPTGEEIRKIVLEGNDMDIRTEAMLFAASRREHLVLKVIP 104 (229)
T ss_dssp CCEEEEEECCTTSCHHHHHHHHHHHHTTTSCEEEECTTTTCHHHHHHHHHTTC---CCHHHHHHHHHHHHHHHCCCCCHH
T ss_pred CCeEEEEEcCCCCCHHHHHHHHHHHHhcCCCceeecCCCCCchHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 457999999999999999999998764 33332211 110 000 0 0 1 1134
Q ss_pred HHhCCCcEEEe----------CC--CCCHHHHHHHHHHHHhcCCeEEEEEEeCCHHHHHHHc
Q psy4598 319 ALDSGLSVVVD----------NT--NPDKESRHRYIEAAKQHGVRCIAVHMNISKEHAKHNI 368 (369)
Q Consensus 319 ~l~~g~~vIiD----------~t--n~~~~~r~~~~~la~~~~~~v~~v~l~~~~e~~~~Rn 368 (369)
+++.|..||+| +. +........+..++...-.+-.++++++|.+++.+|.
T Consensus 105 ~l~~g~~Vi~DRy~~s~~ayqg~~r~~~~~~~~~l~~~~~~~~~pd~vi~L~~~~e~~~~R~ 166 (229)
T 4eaq_A 105 ALKEGKVVLCDRYIDSSLAYQGYARGIGVEEVRALNEFAINGLYPDLTIYLNVSAEVGRERI 166 (229)
T ss_dssp HHHTTCEEEEECCHHHHCCCCCCCSCSCHHHHHHHHHHHHTTCCCSEEEEEECCHHHHHHHH
T ss_pred HHHCCCEEEECCchhHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCCEEEEEeCCHHHHHHHH
Confidence 56788899999 43 4566666666666655556678999999999999883
No 191
>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}
Probab=98.50 E-value=9.3e-07 Score=82.19 Aligned_cols=48 Identities=27% Similarity=0.406 Sum_probs=38.8
Q ss_pred CCCceEEEEecCCceeecCCCCCCCCCccccccccccHHHHHHHHHHCCcEEEEEecCC
Q psy4598 22 CNSAKIASFDLDGTLITTKSGKVFPVDTHDWKLLFSNIESVLKQYLDDGYKLVIFTNQG 80 (369)
Q Consensus 22 ~~~~k~~~fDlDgTLi~~~sg~~~~~~~~d~~~~~p~v~~~L~~L~~~G~~i~i~TNq~ 80 (369)
..+.|+++|||||||+.+... .+.+...++|++|+++|+.++++|..+
T Consensus 18 ~~~~kli~~DlDGTLl~~~~~-----------~i~~~~~~al~~l~~~G~~v~iaTGR~ 65 (283)
T 3dao_A 18 QGMIKLIATDIDGTLVKDGSL-----------LIDPEYMSVIDRLIDKGIIFVVCSGRQ 65 (283)
T ss_dssp -CCCCEEEECCBTTTBSTTCS-----------CCCHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred ccCceEEEEeCcCCCCCCCCC-----------cCCHHHHHHHHHHHHCCCEEEEEcCCC
Confidence 356799999999999966421 256889999999999999999999754
No 192
>3gmt_A Adenylate kinase; ssgcid, ATP-BIN cytoplasm, nucleotide biosynthesis, nucleotide-BIND transferase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=98.49 E-value=3.4e-07 Score=83.28 Aligned_cols=91 Identities=13% Similarity=0.227 Sum_probs=63.9
Q ss_pred EEEEEcCCCCcHHHHHHHHhccCCcEEEeCCcc-hhH-----------------------HHHHHHHHHHHhC---CCcE
Q psy4598 274 VLIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTL-GSW-----------------------QKCVSVMKAALDS---GLSV 326 (369)
Q Consensus 274 lIll~G~pGSGKSTla~~L~~~~~~~~i~~D~~-~~~-----------------------~~~~~~~~~~l~~---g~~v 326 (369)
-+-+.|+|||||||+|+.|++.+++.+|+.+++ +.. +.....+.+.+.. +..+
T Consensus 10 ~~~~~G~pGsGKsT~a~~L~~~~g~~~is~gdllR~~~~~~t~lG~~i~~~~~~G~lvpdei~~~ll~~~l~~~~~~~g~ 89 (230)
T 3gmt_A 10 RLILLGAPGAGKGTQANFIKEKFGIPQISTGDMLRAAVKAGTPLGVEAKTYMDEGKLVPDSLIIGLVKERLKEADCANGY 89 (230)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHTCCEECHHHHHHHHHHTTCHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHSGGGTTCE
T ss_pred ceeeECCCCCCHHHHHHHHHHHhCCCeeechHHHHHhccCCChHHHHHHHHHhhccccccHHHHHHHHHHHhCcccCCCe
Confidence 356889999999999999999999999998654 210 1123344455543 4579
Q ss_pred EEeCCCCCHHHHHHHHHHHHhcCC-eEEEEEEeCCHHHHHHHc
Q psy4598 327 VVDNTNPDKESRHRYIEAAKQHGV-RCIAVHMNISKEHAKHNI 368 (369)
Q Consensus 327 IiD~tn~~~~~r~~~~~la~~~~~-~v~~v~l~~~~e~~~~Rn 368 (369)
|+|+...+..+...+ .+.+. .-.+|+|++|.+++.+|-
T Consensus 90 ILDGfPRt~~Qa~~L----~~~~~~~d~VI~Ldvp~e~l~~Rl 128 (230)
T 3gmt_A 90 LFDGFPRTIAQADAM----KEAGVAIDYVLEIDVPFSEIIERM 128 (230)
T ss_dssp EEESCCCSHHHHHHH----HHTTCCCSEEEEECCCHHHHHHHH
T ss_pred EecCCCCcHHHHHHH----HHhCCCccEEEEEeCCHHHHHHHH
Confidence 999976665444433 23332 346899999999999883
No 193
>2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A
Probab=98.49 E-value=8.5e-07 Score=81.29 Aligned_cols=44 Identities=9% Similarity=0.068 Sum_probs=37.8
Q ss_pred CCCCchhHHHHHHHHhcCCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCcc
Q psy4598 118 YRKPVPGMWEYLSQEKNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFF 181 (369)
Q Consensus 118 ~rKP~~gm~~~~~~~~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~ 181 (369)
..+|++..+..+++++ +++++++++|||+. +|+.++.++|+.+.
T Consensus 184 ~~~~K~~~~~~~~~~~----~~~~~~~~~iGD~~----------------nD~~~~~~ag~~v~ 227 (261)
T 2rbk_A 184 KGDTKQKGIDEIIRHF----GIKLEETMSFGDGG----------------NDISMLRHAAIGVA 227 (261)
T ss_dssp TTCSHHHHHHHHHHHH----TCCGGGEEEEECSG----------------GGHHHHHHSSEEEE
T ss_pred CCCChHHHHHHHHHHc----CCCHHHEEEECCCH----------------HHHHHHHHcCceEE
Confidence 3567778888888886 68999999999998 89999999999653
No 194
>2jaq_A Deoxyguanosine kinase; transferase, deoxyribonucleoside kinase; HET: DCP; 2.3A {Mycoplasma mycoides subsp} PDB: 2jat_A* 2jas_A*
Probab=98.48 E-value=8.2e-07 Score=77.84 Aligned_cols=29 Identities=28% Similarity=0.516 Sum_probs=26.4
Q ss_pred EEEEEcCCCCcHHHHHHHHhccCCcEEEe
Q psy4598 274 VLIMIGSQGSGKSSFVSTYLKPLNYTTVN 302 (369)
Q Consensus 274 lIll~G~pGSGKSTla~~L~~~~~~~~i~ 302 (369)
+|+|.|+|||||||+++.|++.++..++.
T Consensus 2 ~I~i~G~~GsGKsT~~~~L~~~l~~~~~~ 30 (205)
T 2jaq_A 2 KIAIFGTVGAGKSTISAEISKKLGYEIFK 30 (205)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHCCEEEC
T ss_pred EEEEECCCccCHHHHHHHHHHhcCCcEEc
Confidence 68999999999999999999998877765
No 195
>1uj2_A Uridine-cytidine kinase 2; alpha/beta mononucleotide-binding HOLD, transferase; HET: C5P ADP; 1.80A {Homo sapiens} SCOP: c.37.1.6 PDB: 1uei_A* 1uej_A* 1udw_A 1ufq_A* 1xrj_A*
Probab=98.46 E-value=6.2e-07 Score=82.30 Aligned_cols=41 Identities=20% Similarity=0.242 Sum_probs=33.0
Q ss_pred ccccccEEEEEEcCCCCcHHHHHHHHhccCCcE----------EEeCCcch
Q psy4598 267 MKAALDSVLIMIGSQGSGKSSFVSTYLKPLNYT----------TVNRDTLG 307 (369)
Q Consensus 267 ~~~~~~~lIll~G~pGSGKSTla~~L~~~~~~~----------~i~~D~~~ 307 (369)
+....+.+|.|+|+|||||||+|+.|++.+++. +++.|.+.
T Consensus 17 ~~~~~~~iI~I~G~~GSGKST~a~~L~~~lg~~~~d~~~~~~~~i~~D~~~ 67 (252)
T 1uj2_A 17 PNGGEPFLIGVSGGTASGKSSVCAKIVQLLGQNEVDYRQKQVVILSQDSFY 67 (252)
T ss_dssp ----CCEEEEEECSTTSSHHHHHHHHHHHTTGGGSCGGGCSEEEEEGGGGB
T ss_pred ccCCCcEEEEEECCCCCCHHHHHHHHHHHhhhhcccccCCceEEEecCccc
Confidence 334456799999999999999999999988765 89999873
No 196
>3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A*
Probab=98.45 E-value=3.8e-07 Score=83.62 Aligned_cols=42 Identities=14% Similarity=-0.020 Sum_probs=37.5
Q ss_pred CCchhHHHHHHHHhcCCccccC--CccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCcc
Q psy4598 120 KPVPGMWEYLSQEKNGDLAIDI--SQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFF 181 (369)
Q Consensus 120 KP~~gm~~~~~~~~~~~~~i~~--~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~ 181 (369)
++++..++.+++++ ++++ +++++|||+. +|+.++.++|+.+.
T Consensus 175 ~~K~~~l~~l~~~~----~i~~~~~~~~~~GD~~----------------nD~~m~~~ag~~va 218 (259)
T 3zx4_A 175 ADKGRAVARLRALW----PDPEEARFAVGLGDSL----------------NDLPLFRAVDLAVY 218 (259)
T ss_dssp CCHHHHHHHHHHTC----SSHHHHTSEEEEESSG----------------GGHHHHHTSSEEEE
T ss_pred CCHHHHHHHHHHHh----CCCCCCceEEEEeCCH----------------HHHHHHHhCCCeEE
Confidence 67788999999885 7888 9999999999 89999999998864
No 197
>3a8t_A Adenylate isopentenyltransferase; rossmann fold protein; HET: ATP; 2.37A {Humulus lupulus}
Probab=98.45 E-value=2.4e-06 Score=81.88 Aligned_cols=95 Identities=13% Similarity=0.233 Sum_probs=64.8
Q ss_pred ccEEEEEEcCCCCcHHHHHHHHhccCCcEEEeCCcch--------------------------------------hHHH-
Q psy4598 271 LDSVLIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTLG--------------------------------------SWQK- 311 (369)
Q Consensus 271 ~~~lIll~G~pGSGKSTla~~L~~~~~~~~i~~D~~~--------------------------------------~~~~- 311 (369)
++.+|+|+||+||||||++..|++.++..+||.|.+. .|..
T Consensus 39 ~~~lIvI~GPTgsGKTtLa~~LA~~l~~eiIs~Ds~qvYr~mdIgTakp~~eE~~gvphhlidi~~~~~e~~s~~~F~~~ 118 (339)
T 3a8t_A 39 KEKLLVLMGATGTGKSRLSIDLAAHFPLEVINSDKMQVYKGLDITTNKISVPDRGGVPHHLLGEVDPARGELTPADFRSL 118 (339)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHTTSCEEEEECCSSTTBSSCTTTTTCCCSGGGTTCCEESSSCBCGGGCCCCHHHHHHH
T ss_pred CCceEEEECCCCCCHHHHHHHHHHHCCCcEEcccccccccceeeecCCCCHHHHcCCCEeeccccCcccCccCHHHHHHH
Confidence 3469999999999999999999999999999999861 1222
Q ss_pred HHHHHHHHHhCCCcEEEeCCCCCHHHHHHHHH------------------HHHhcCCeEEEEEEeCCHHHHHHH
Q psy4598 312 CVSVMKAALDSGLSVVVDNTNPDKESRHRYIE------------------AAKQHGVRCIAVHMNISKEHAKHN 367 (369)
Q Consensus 312 ~~~~~~~~l~~g~~vIiD~tn~~~~~r~~~~~------------------la~~~~~~v~~v~l~~~~e~~~~R 367 (369)
..+.+.+....|+.+|+-+.. .-..+.++. +.....+.+.+++++++.+++.+|
T Consensus 119 a~~~i~~i~~~g~~pIlvGGt--glYi~all~g~~~p~~~d~~~a~~~~~~~~~~~~~~~~i~L~~~re~L~~R 190 (339)
T 3a8t_A 119 AGKAVSEITGRRKLPVLVGGS--NSFIHALLVDRFDSSGPGVFEEGSHSVVSSELRYDCCFLWVDVSVKVLTDY 190 (339)
T ss_dssp HHHHHHHHHHTTCEEEEECCC--HHHHHHHHBSSCCTTCC-------------CBSSEEEEEEEECCHHHHHHH
T ss_pred HHHHHHHHHhcCCeEEEEcCH--HHHHHHHHhCCCCCcccChhhhcccCccccccccCeEEEEEeCCHHHHHHH
Confidence 233344455678877765442 111222211 001234678899999999998877
No 198
>2grj_A Dephospho-COA kinase; TM1387, EC 2.7.1.24, dephosphocoenzyme kinase, structural genomics, joint center for structural GE JCSG; HET: ADP COD; 2.60A {Thermotoga maritima}
Probab=98.43 E-value=2.4e-07 Score=82.00 Aligned_cols=35 Identities=26% Similarity=0.347 Sum_probs=32.8
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhccCCcEEEeCCcc
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTL 306 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~~~~~~i~~D~~ 306 (369)
..+|.|+|.+||||||+++.|++.+++.+|+.|.+
T Consensus 12 ~~iIgltG~~GSGKSTva~~L~~~lg~~vid~D~~ 46 (192)
T 2grj_A 12 HMVIGVTGKIGTGKSTVCEILKNKYGAHVVNVDRI 46 (192)
T ss_dssp EEEEEEECSTTSSHHHHHHHHHHHHCCEEEEHHHH
T ss_pred ceEEEEECCCCCCHHHHHHHHHHhcCCEEEECcHH
Confidence 46899999999999999999999989999999987
No 199
>2f6r_A COA synthase, bifunctional coenzyme A synthase; 18044849, bifunctional coenzyme A synthase (COA synthase), S genomics; HET: ACO UNL; 1.70A {Mus musculus}
Probab=98.39 E-value=4.2e-07 Score=85.09 Aligned_cols=38 Identities=32% Similarity=0.287 Sum_probs=33.0
Q ss_pred cccccEEEEEEcCCCCcHHHHHHHHhccCCcEEEeCCcc
Q psy4598 268 KAALDSVLIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTL 306 (369)
Q Consensus 268 ~~~~~~lIll~G~pGSGKSTla~~L~~~~~~~~i~~D~~ 306 (369)
.++.|.+|.|+|+|||||||+++.|+ .+++.+|+.|.+
T Consensus 71 ~~~~~~iI~I~G~~GSGKSTva~~La-~lg~~~id~D~~ 108 (281)
T 2f6r_A 71 LPSGLYVLGLTGISGSGKSSVAQRLK-NLGAYIIDSDHL 108 (281)
T ss_dssp SCTTCEEEEEEECTTSCHHHHHHHHH-HHTCEEEEHHHH
T ss_pred CCCCCEEEEEECCCCCCHHHHHHHHH-HCCCcEEehhHH
Confidence 34456899999999999999999999 578999998875
No 200
>1jjv_A Dephospho-COA kinase; P-loop nucleotide-binding fold, structure 2 function project, S2F, structural genomics, transferase; HET: ATP; 2.00A {Haemophilus influenzae} SCOP: c.37.1.1
Probab=98.38 E-value=5.5e-07 Score=79.67 Aligned_cols=35 Identities=23% Similarity=0.466 Sum_probs=31.3
Q ss_pred ccEEEEEEcCCCCcHHHHHHHHhccCCcEEEeCCcc
Q psy4598 271 LDSVLIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTL 306 (369)
Q Consensus 271 ~~~lIll~G~pGSGKSTla~~L~~~~~~~~i~~D~~ 306 (369)
|+.+|.|+|+|||||||+++.|+. +++.+++.|.+
T Consensus 1 m~~~i~l~G~~GsGKST~~~~La~-lg~~~id~d~~ 35 (206)
T 1jjv_A 1 MTYIVGLTGGIGSGKTTIANLFTD-LGVPLVDADVV 35 (206)
T ss_dssp CCEEEEEECSTTSCHHHHHHHHHT-TTCCEEEHHHH
T ss_pred CCcEEEEECCCCCCHHHHHHHHHH-CCCcccchHHH
Confidence 356899999999999999999988 89999998875
No 201
>2v54_A DTMP kinase, thymidylate kinase; nucleotide biosynthesis, ATP-binding, nucleotide-binding, poxvirus, transferase; HET: TYD POP; 2.4A {Vaccinia virus copenhagen} PDB: 2w0s_A*
Probab=98.36 E-value=8.9e-07 Score=77.83 Aligned_cols=95 Identities=11% Similarity=0.157 Sum_probs=56.9
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhccC-CcEEEeCCcch----------h-------H----HHH---------HHHHHHHH
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKPL-NYTTVNRDTLG----------S-------W----QKC---------VSVMKAAL 320 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~~-~~~~i~~D~~~----------~-------~----~~~---------~~~~~~~l 320 (369)
+.+|+|+|+|||||||+++.|++.+ ++.+++.+... . + ..+ .+.+...+
T Consensus 4 ~~~I~l~G~~GsGKsT~~~~L~~~l~g~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~l~~~~r~~~~~~i~~~l 83 (204)
T 2v54_A 4 GALIVFEGLDKSGKTTQCMNIMESIPANTIKYLNFPQRSTVTGKMIDDYLTRKKTYNDHIVNLLFCANRWEFASFIQEQL 83 (204)
T ss_dssp CCEEEEECCTTSSHHHHHHHHHHTSCGGGEEEEESSCTTSHHHHHHHHHHTSSCCCCHHHHHHHHHHHHHTTHHHHHHHH
T ss_pred CcEEEEEcCCCCCHHHHHHHHHHHHCCCceEEEecCCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4689999999999999999999987 46555433211 0 0 000 01223456
Q ss_pred hCCCcEEEeCCCCCHHH--------HHHHHHHHHhcCCeEEEEEEeCCHHHHHH
Q psy4598 321 DSGLSVVVDNTNPDKES--------RHRYIEAAKQHGVRCIAVHMNISKEHAKH 366 (369)
Q Consensus 321 ~~g~~vIiD~tn~~~~~--------r~~~~~la~~~~~~v~~v~l~~~~e~~~~ 366 (369)
..+..||+|....+... +..+..+......+-.+|++++|.+++.+
T Consensus 84 ~~~~~vi~Dr~~~s~~~~~~~~g~~~~~~~~~~~~~~~~d~vi~l~~~~e~~~~ 137 (204)
T 2v54_A 84 EQGITLIVDRYAFSGVAYAAAKGASMTLSKSYESGLPKPDLVIFLESGSKEINR 137 (204)
T ss_dssp HTTCEEEEESCHHHHHHHHHHTTCCHHHHHHHHTTSBCCSEEEEECCCHHHHTT
T ss_pred HCCCEEEEECchhhHHHHHHccCCCHHHHHHHhcCCCCCCEEEEEeCCHHHHHh
Confidence 77888999964321100 22222222221233468999999998865
No 202
>3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis}
Probab=98.36 E-value=3.8e-07 Score=78.84 Aligned_cols=24 Identities=25% Similarity=0.407 Sum_probs=22.0
Q ss_pred ccccHHHHHHHHHHCCcEEEEEecC
Q psy4598 55 LFSNIESVLKQYLDDGYKLVIFTNQ 79 (369)
Q Consensus 55 ~~p~v~~~L~~L~~~G~~i~i~TNq 79 (369)
++||+.+.|+.|++ +++++|+||.
T Consensus 70 ~~pg~~e~L~~L~~-~~~~~i~T~~ 93 (180)
T 3bwv_A 70 VMPHAQEVVKQLNE-HYDIYIATAA 93 (180)
T ss_dssp BCTTHHHHHHHHTT-TSEEEEEECC
T ss_pred CCcCHHHHHHHHHh-cCCEEEEeCC
Confidence 68999999999998 4999999994
No 203
>1zp6_A Hypothetical protein ATU3015; alpha-beta protein., structural genomics, PSI, protein struc initiative; 3.20A {Agrobacterium tumefaciens str} SCOP: c.37.1.25
Probab=98.35 E-value=2.2e-06 Score=74.55 Aligned_cols=92 Identities=16% Similarity=0.176 Sum_probs=60.2
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhccC--CcEEEeCCcchh---------------------HHHHHHHHHHHHhCCCcEEE
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKPL--NYTTVNRDTLGS---------------------WQKCVSVMKAALDSGLSVVV 328 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~~--~~~~i~~D~~~~---------------------~~~~~~~~~~~l~~g~~vIi 328 (369)
..+|+|+|+|||||||+++.|+... +.++++.|.+.. ++.+...+......|..+++
T Consensus 9 g~~i~l~G~~GsGKSTl~~~La~~~~~g~i~i~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~ 88 (191)
T 1zp6_A 9 GNILLLSGHPGSGKSTIAEALANLPGVPKVHFHSDDLWGYIKHGRIDPWLPQSHQQNRMIMQIAADVAGRYAKEGYFVIL 88 (191)
T ss_dssp TEEEEEEECTTSCHHHHHHHHHTCSSSCEEEECTTHHHHTCCSSCCCTTSSSHHHHHHHHHHHHHHHHHHHHHTSCEEEE
T ss_pred CeEEEEECCCCCCHHHHHHHHHhccCCCeEEEcccchhhhhhcccccCCccchhhhhHHHHHHHHHHHHHHhccCCeEEE
Confidence 4689999999999999999999875 456888876421 11111122223455667888
Q ss_pred eCCCCCHHHHHHHHHHHHhcCCeEEEEEEeCCHHHHHHHc
Q psy4598 329 DNTNPDKESRHRYIEAAKQHGVRCIAVHMNISKEHAKHNI 368 (369)
Q Consensus 329 D~tn~~~~~r~~~~~la~~~~~~v~~v~l~~~~e~~~~Rn 368 (369)
|.... ...+..+ ...+..+..+++.++.+++++|.
T Consensus 89 ~~~~~-~~~l~~~----~~~~~~~~~ls~~~~~~v~~~R~ 123 (191)
T 1zp6_A 89 DGVVR-PDWLPAF----TALARPLHYIVLRTTAAEAIERC 123 (191)
T ss_dssp CSCCC-TTTTHHH----HTTCSCEEEEEEECCHHHHHHHH
T ss_pred eccCc-HHHHHHH----HhcCCCeEEEEecCCHHHHHHHH
Confidence 87542 2222222 22245567899999999998874
No 204
>3nwj_A ATSK2; P loop, shikimate, nucleoside monophosphate kinase, shikimat ATP binding, chloroplast, transferase; 2.35A {Arabidopsis thaliana}
Probab=98.35 E-value=4.8e-07 Score=83.44 Aligned_cols=88 Identities=20% Similarity=0.267 Sum_probs=57.4
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhccCCcEEEeCCcchh-------------------HHHHHH-HHHHHHhC-CCcEEEeC
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTLGS-------------------WQKCVS-VMKAALDS-GLSVVVDN 330 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~~~~~~i~~D~~~~-------------------~~~~~~-~~~~~l~~-g~~vIiD~ 330 (369)
...|+|+|+|||||||+++.|++.+++.+++.|.+.. ++.... .+.+.+.. ...||.++
T Consensus 48 g~~i~l~G~~GsGKSTl~~~La~~lg~~~~d~d~~~~~~~~g~~i~~i~~~~ge~~fr~~e~~~l~~l~~~~~~~Via~G 127 (250)
T 3nwj_A 48 GRSMYLVGMMGSGKTTVGKIMARSLGYTFFDCDTLIEQAMKGTSVAEIFEHFGESVFREKETEALKKLSLMYHQVVVSTG 127 (250)
T ss_dssp TCCEEEECSTTSCHHHHHHHHHHHHTCEEEEHHHHHHHHSTTSCHHHHHHHHCHHHHHHHHHHHHHHHHHHCSSEEEECC
T ss_pred CCEEEEECCCCCCHHHHHHHHHHhcCCcEEeCcHHHHHHhcCccHHHHHHHhCcHHHHHHHHHHHHHHHhhcCCcEEecC
Confidence 3579999999999999999999999999999887621 112222 22333333 33444333
Q ss_pred C--CCCHHHHHHHHHHHHhcCCeEEEEEEeCCHHHHHHH
Q psy4598 331 T--NPDKESRHRYIEAAKQHGVRCIAVHMNISKEHAKHN 367 (369)
Q Consensus 331 t--n~~~~~r~~~~~la~~~~~~v~~v~l~~~~e~~~~R 367 (369)
. ......+..+ + .+ .+||+++|.+++.+|
T Consensus 128 gG~v~~~~~~~~l----~-~~---~vV~L~a~~e~l~~R 158 (250)
T 3nwj_A 128 GGAVIRPINWKYM----H-KG---ISIWLDVPLEALAHR 158 (250)
T ss_dssp GGGGGSHHHHHHH----T-TS---EEEEEECCHHHHHHH
T ss_pred CCeecCHHHHHHH----h-CC---cEEEEECCHHHHHHH
Confidence 2 2233333332 2 22 589999999999887
No 205
>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A
Probab=98.32 E-value=3.7e-06 Score=76.69 Aligned_cols=44 Identities=27% Similarity=0.396 Sum_probs=36.1
Q ss_pred ceEEEEecCCceeecCCCCCCCCCccccccccccHHHHHHHHHHCCcEEEEEecCC
Q psy4598 25 AKIASFDLDGTLITTKSGKVFPVDTHDWKLLFSNIESVLKQYLDDGYKLVIFTNQG 80 (369)
Q Consensus 25 ~k~~~fDlDgTLi~~~sg~~~~~~~~d~~~~~p~v~~~L~~L~~~G~~i~i~TNq~ 80 (369)
.|+++|||||||+.+.. .+.+...++|++|+++|++++++|-.+
T Consensus 3 ~kli~~DlDGTLl~~~~------------~i~~~~~~al~~l~~~G~~~~~aTGR~ 46 (258)
T 2pq0_A 3 RKIVFFDIDGTLLDEQK------------QLPLSTIEAVRRLKQSGVYVAIATGRA 46 (258)
T ss_dssp CCEEEECTBTTTBCTTS------------CCCHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred ceEEEEeCCCCCcCCCC------------ccCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 48999999999997642 146778899999999999999988643
No 206
>4edh_A DTMP kinase, thymidylate kinase; structural genomics, PSI-biology; HET: TMP ADP; 1.32A {Pseudomonas aeruginosa PAO1} PDB: 4e5u_A* 4esh_A* 4gmd_A* 3uwk_A* 3uwo_A* 3uxm_A*
Probab=98.29 E-value=5e-06 Score=74.66 Aligned_cols=97 Identities=15% Similarity=0.132 Sum_probs=63.5
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhccC---CcEEEeCC----c-----ch-----------------------hHHHHHHHH
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKPL---NYTTVNRD----T-----LG-----------------------SWQKCVSVM 316 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~~---~~~~i~~D----~-----~~-----------------------~~~~~~~~~ 316 (369)
..+|++.|++||||||+++.|++.+ +..++... . ++ .++.+.+.+
T Consensus 6 g~~i~~eG~~gsGKsT~~~~l~~~l~~~~~~v~~~~~p~~~~~g~~i~~~l~~~~~~~~~~~~~~llf~a~R~~~~~~~i 85 (213)
T 4edh_A 6 GLFVTLEGPEGAGKSTNRDYLAERLRERGIEVQLTREPGGTPLAERIRELLLAPSDEPMAADTELLLMFAARAQHLAGVI 85 (213)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHHHHHTTTCCEEEEESSCSSHHHHHHHHHHHSCCSSCCCHHHHHHHHHHHHHHHHHHTH
T ss_pred ceEEEEEcCCCCCHHHHHHHHHHHHHHcCCCcccccCCCCCHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 4799999999999999999998764 22222110 0 11 012223445
Q ss_pred HHHHhCCCcEEEeCC------------CCCHHHHHHHHHHHHhcCCeEEEEEEeCCHHHHHHHc
Q psy4598 317 KAALDSGLSVVVDNT------------NPDKESRHRYIEAAKQHGVRCIAVHMNISKEHAKHNI 368 (369)
Q Consensus 317 ~~~l~~g~~vIiD~t------------n~~~~~r~~~~~la~~~~~~v~~v~l~~~~e~~~~Rn 368 (369)
..+++.|..||.|-. ....+....+...+...-.+-.+++|++|++++.+|-
T Consensus 86 ~p~l~~g~~Vi~DRy~~S~~ayq~~~~g~~~~~~~~l~~~~~~~~~PDlvi~Ld~~~e~~~~Ri 149 (213)
T 4edh_A 86 RPALARGAVVLCDRFTDATYAYQGGGRGLPEARIAALESFVQGDLRPDLTLVFDLPVEIGLARA 149 (213)
T ss_dssp HHHHHTTCEEEEESCHHHHHHHTTTTTCCCHHHHHHHHHHHHTTCCCSEEEEEECCHHHHHHHH
T ss_pred HHHHHCCCEEEECccHhHHHHHhhhccCCCHHHHHHHHHHHhcCCCCCEEEEEeCCHHHHHHHH
Confidence 667789999999953 2233444444444444456778999999999999884
No 207
>2qt1_A Nicotinamide riboside kinase 1; non-protein kinase, NAD+, NRK1, nicotinic acid riboside kinase activity, NAD biosynthesis; HET: NNR; 1.32A {Homo sapiens} PDB: 2qsy_A* 2qsz_A* 2qt0_A* 2p0e_A* 2qg6_A* 2ql6_A*
Probab=98.27 E-value=2.8e-06 Score=75.14 Aligned_cols=89 Identities=15% Similarity=0.179 Sum_probs=60.1
Q ss_pred ccEEEEEEcCCCCcHHHHHHHHhccC-CcEEEeCCcch--------------h--------HHHHHHHHHHHHh------
Q psy4598 271 LDSVLIMIGSQGSGKSSFVSTYLKPL-NYTTVNRDTLG--------------S--------WQKCVSVMKAALD------ 321 (369)
Q Consensus 271 ~~~lIll~G~pGSGKSTla~~L~~~~-~~~~i~~D~~~--------------~--------~~~~~~~~~~~l~------ 321 (369)
++.+|.++|+|||||||+++.|++.+ ++.++++|.+- . ...+.+.+...+.
T Consensus 20 ~~~~i~i~G~~GsGKSTl~~~L~~~~~~~~~i~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~ 99 (207)
T 2qt1_A 20 KTFIIGISGVTNSGKTTLAKNLQKHLPNCSVISQDDFFKPESEIETDKNGFLQYDVLEALNMEKMMSAISCWMESARHSV 99 (207)
T ss_dssp CCEEEEEEESTTSSHHHHHHHHHTTSTTEEEEEGGGGBCCGGGSCBCTTSCBCCSSGGGBCHHHHHHHHHHHHHHHTTSS
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHhcCCcEEEeCCccccCHhHhhccccCCChhHHHHHhHHHHHHHHHHHHHhCCCCCC
Confidence 45789999999999999999999988 89999998761 0 1123333333332
Q ss_pred ---------CCCcEEEeCCCCCHHHHHHHHHHHHhcCCeEEEEEEeCCHHHHHHH
Q psy4598 322 ---------SGLSVVVDNTNPDKESRHRYIEAAKQHGVRCIAVHMNISKEHAKHN 367 (369)
Q Consensus 322 ---------~g~~vIiD~tn~~~~~r~~~~~la~~~~~~v~~v~l~~~~e~~~~R 367 (369)
....||+|+..... .+ .+. ...-.++++++|.+++.+|
T Consensus 100 ~~~~~~~~~~~~~vi~eg~~~~~-~~-~~~------~~~d~~i~l~~~~~~~~~R 146 (207)
T 2qt1_A 100 VSTDQESAEEIPILIIEGFLLFN-YK-PLD------TIWNRSYFLTIPYEECKRR 146 (207)
T ss_dssp CCC-----CCCCEEEEECTTCTT-CG-GGT------TTCSEEEEEECCHHHHHHH
T ss_pred cCCCeeecCCCCEEEEeehHHcC-cH-HHH------HhcCeeEEEECCHHHHHHH
Confidence 24578899865431 11 111 1222689999999998877
No 208
>3crm_A TRNA delta(2)-isopentenylpyrophosphate transferase; ATP-binding, nucleotide-binding, nucleotidyltransferase, tRNA processing; 1.90A {Pseudomonas aeruginosa} PDB: 3crq_A 3crr_A
Probab=98.26 E-value=1.5e-06 Score=82.96 Aligned_cols=37 Identities=16% Similarity=0.393 Sum_probs=34.2
Q ss_pred cccEEEEEEcCCCCcHHHHHHHHhccCCcEEEeCCcc
Q psy4598 270 ALDSVLIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTL 306 (369)
Q Consensus 270 ~~~~lIll~G~pGSGKSTla~~L~~~~~~~~i~~D~~ 306 (369)
+|+.+|+|+|++||||||++..|++.++..+|+.|.+
T Consensus 3 ~m~~~i~i~GptGsGKTtla~~La~~l~~~iis~Ds~ 39 (323)
T 3crm_A 3 SLPPAIFLMGPTAAGKTDLAMALADALPCELISVDSA 39 (323)
T ss_dssp CCCEEEEEECCTTSCHHHHHHHHHHHSCEEEEEECTT
T ss_pred CCCcEEEEECCCCCCHHHHHHHHHHHcCCcEEeccch
Confidence 3678999999999999999999999999999999875
No 209
>4hlc_A DTMP kinase, thymidylate kinase; TMK, MRSA, pipiridine, transfera transferase inhibitor complex; HET: T05; 1.55A {Staphylococcus aureus subsp} PDB: 2cck_A 4gfd_A* 4gsy_A* 4hdc_A* 4hej_A* 2ccj_A* 4hld_A* 2ccg_A*
Probab=98.25 E-value=6.9e-06 Score=73.30 Aligned_cols=97 Identities=20% Similarity=0.258 Sum_probs=61.7
Q ss_pred ccEEEEEEcCCCCcHHHHHHHHhccC--Cc--EEEe-CC-c-----ch---------------------hHHHHHHHHHH
Q psy4598 271 LDSVLIMIGSQGSGKSSFVSTYLKPL--NY--TTVN-RD-T-----LG---------------------SWQKCVSVMKA 318 (369)
Q Consensus 271 ~~~lIll~G~pGSGKSTla~~L~~~~--~~--~~i~-~D-~-----~~---------------------~~~~~~~~~~~ 318 (369)
|.++|++-|+.||||||.++.|++.+ +. .... .. . ++ .++.+......
T Consensus 1 M~kFI~~EG~dGsGKsTq~~~L~~~L~~~~~v~~~~eP~~t~~g~~ir~~l~~~~~~~~~~~~lLf~a~R~~~~~~~i~p 80 (205)
T 4hlc_A 1 MSAFITFEGPEGSGKTTVINEVYHRLVKDYDVIMTREPGGVPTGEEIRKIVLEGNDMDIRTEAMLFAASRREHLVLKVIP 80 (205)
T ss_dssp -CEEEEEECCTTSCHHHHHHHHHHHHTTTSCEEEEESSTTCHHHHHHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHTHHH
T ss_pred CCCEEEEECCCCCcHHHHHHHHHHHHHCCCCEEEeeCCCCChHHHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 45789999999999999999998765 22 2221 11 1 11 01223344566
Q ss_pred HHhCCCcEEEeCCC------------CCHHHHHHHHHHHHhcCCeEEEEEEeCCHHHHHHH
Q psy4598 319 ALDSGLSVVVDNTN------------PDKESRHRYIEAAKQHGVRCIAVHMNISKEHAKHN 367 (369)
Q Consensus 319 ~l~~g~~vIiD~tn------------~~~~~r~~~~~la~~~~~~v~~v~l~~~~e~~~~R 367 (369)
++..|..||.|-.. ...+....+...+...-.|=.++++++|++++.+|
T Consensus 81 ~l~~g~~Vi~DRy~~S~~ayq~~~~~~~~~~~~~l~~~~~~~~~PDl~i~Ld~~~e~~~~R 141 (205)
T 4hlc_A 81 ALKEGKVVLCDRYIDSSLAYQGYARGIGVEEVRALNEFAINGLYPDLTIYLNVSAEVGRER 141 (205)
T ss_dssp HHHTTCEEEEECCHHHHHHHTTTTTSSCHHHHHHHHHHHHTTCCCSEEEEEECCHHHHHHH
T ss_pred HHHcCCEEEecCcccchHHHHhccccchHHHHHHHHHHHhcCCCCCEEeeeCCCHHHHHHH
Confidence 78999999988532 23333334444443333455789999999999988
No 210
>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A
Probab=98.25 E-value=4.7e-06 Score=76.87 Aligned_cols=44 Identities=11% Similarity=-0.022 Sum_probs=38.4
Q ss_pred CCCCchhHHHHHHHHhcCCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCcc
Q psy4598 118 YRKPVPGMWEYLSQEKNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFF 181 (369)
Q Consensus 118 ~rKP~~gm~~~~~~~~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f~ 181 (369)
..+|++..++.+++++ +++++++++|||+. .|+.++..+|+.+.
T Consensus 188 ~~~~K~~~~~~l~~~l----~i~~~~~~~~GD~~----------------nD~~m~~~ag~~va 231 (271)
T 1rlm_A 188 PGLHKANGISRLLKRW----DLSPQNVVAIGDSG----------------NDAEMLKMARYSFA 231 (271)
T ss_dssp TTCSHHHHHHHHHHHH----TCCGGGEEEEECSG----------------GGHHHHHHCSEEEE
T ss_pred CCCChHHHHHHHHHHh----CCCHHHEEEECCcH----------------HHHHHHHHcCCeEE
Confidence 3678888899998886 78999999999998 89999999999753
No 211
>3lv8_A DTMP kinase, thymidylate kinase; structural genomics, in diseases, center for structural genomics of infectious DISE ATP-binding; HET: ADP TMP TYD; 1.80A {Vibrio cholerae o1 biovar eltor} PDB: 3n2i_A*
Probab=98.24 E-value=1.8e-06 Score=78.83 Aligned_cols=97 Identities=21% Similarity=0.235 Sum_probs=61.4
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhccC---Cc--EEEeCC---------------------cch-----------hHHHHHH
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKPL---NY--TTVNRD---------------------TLG-----------SWQKCVS 314 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~~---~~--~~i~~D---------------------~~~-----------~~~~~~~ 314 (369)
+.+|++.|++||||||+++.|++.+ +. +.+... .+. .++.+.+
T Consensus 27 ~~~i~~eG~~GsGKsT~~~~l~~~l~~~~~~~~~~~rep~~t~~g~~ir~~l~~~~~~~~~~~~~e~lLf~A~R~~~~~~ 106 (236)
T 3lv8_A 27 AKFIVIEGLEGAGKSTAIQVVVETLQQNGIDHITRTREPGGTLLAEKLRALVKEEHPGEELQDITELLLVYAARVQLVEN 106 (236)
T ss_dssp CCEEEEEESTTSCHHHHHHHHHHHHHHTTCCCEEEEESSCSSHHHHHHHHHHHSCCTTSCCCHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHHhcCCCeeeeecCCCCCHHHHHHHHHHhhCCCcccCCHHHHHHHHHHHHHHHHHH
Confidence 4799999999999999999998864 21 222110 010 0122233
Q ss_pred HHHHHHhCCCcEEEeCC------------CCCHHHHHHHHHHHHhcCCeEEEEEEeCCHHHHHHHc
Q psy4598 315 VMKAALDSGLSVVVDNT------------NPDKESRHRYIEAAKQHGVRCIAVHMNISKEHAKHNI 368 (369)
Q Consensus 315 ~~~~~l~~g~~vIiD~t------------n~~~~~r~~~~~la~~~~~~v~~v~l~~~~e~~~~Rn 368 (369)
.++.+++.|..||.|-. ....+....+...+...-.+-.+++|++|++++.+|-
T Consensus 107 ~I~paL~~g~~VI~DRy~~S~~AYq~~~rgl~~~~i~~l~~~~~~~~~PDlvi~Ldv~~e~~~~Ri 172 (236)
T 3lv8_A 107 VIKPALARGEWVVGDRHDMSSQAYQGGGRQIAPSTMQSLKQTALGDFKPDLTLYLDIDPKLGLERA 172 (236)
T ss_dssp THHHHHHTTCEEEEESCHHHHHHHTTTTTCCCHHHHHHHHHHHHTTCCCSEEEEEECCHHHHHHC-
T ss_pred HHHHHHHcCCEEEEeeecchHHhhhhhccCCCHHHHHHHHHHHhcCCCCCEEEEEeCCHHHHHHHH
Confidence 45567889999999942 2233333344344433334667999999999999873
No 212
>2if2_A Dephospho-COA kinase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 3.00A {Aquifex aeolicus}
Probab=98.21 E-value=1e-06 Score=77.76 Aligned_cols=33 Identities=24% Similarity=0.413 Sum_probs=30.3
Q ss_pred EEEEEEcCCCCcHHHHHHHHhccCCcEEEeCCcc
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTL 306 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~~~~~~i~~D~~ 306 (369)
..|.++|++||||||+++.|++ +++.+++.|.+
T Consensus 2 ~~i~i~G~~GsGKSTl~~~L~~-~g~~~i~~d~~ 34 (204)
T 2if2_A 2 KRIGLTGNIGCGKSTVAQMFRE-LGAYVLDADKL 34 (204)
T ss_dssp CEEEEEECTTSSHHHHHHHHHH-TTCEEEEHHHH
T ss_pred eEEEEECCCCcCHHHHHHHHHH-CCCEEEEccHH
Confidence 4689999999999999999999 89999998875
No 213
>2bbw_A Adenylate kinase 4, AK4; nucleotide kinase, nucleotide binding, human, structura genomics, structural genomics consortium, SGC, transferase; HET: GP5; 2.05A {Homo sapiens} PDB: 2ar7_A* 3ndp_A
Probab=98.20 E-value=5.1e-06 Score=75.72 Aligned_cols=92 Identities=16% Similarity=0.202 Sum_probs=57.8
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhccCCcEEEeCCcchhH--------H----------------HHHHHHHHHHh--CCCc
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTLGSW--------Q----------------KCVSVMKAALD--SGLS 325 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~~~~~~i~~D~~~~~--------~----------------~~~~~~~~~l~--~g~~ 325 (369)
+.+|+|+|+|||||||+++.|++.++...++.+.+... . ...+.+...+. .+..
T Consensus 27 ~~~i~l~G~~GsGKSTl~k~La~~lg~~~~~~G~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~~l~~~l~~~~~~~ 106 (246)
T 2bbw_A 27 LLRAVILGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENIKASTEVGEMAKQYIEKSLLVPDHVITRLMMSELENRRGQH 106 (246)
T ss_dssp CCEEEEECCTTSSHHHHHHHHHHHHCCCCEEHHHHHHHHHHTTCHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTCTTSC
T ss_pred CcEEEEECCCCCCHHHHHHHHHHHhCCeEecHHHHHHHHHhcCChHHHHHHHHHHcCCCCCHHHHHHHHHHHHHhcCCCe
Confidence 57899999999999999999999888777776554110 0 01111222222 3456
Q ss_pred EEEeCCCCCHHHHHHHHHHHHhcCCeEEEEEEeCCHHHHHHH
Q psy4598 326 VVVDNTNPDKESRHRYIEAAKQHGVRCIAVHMNISKEHAKHN 367 (369)
Q Consensus 326 vIiD~tn~~~~~r~~~~~la~~~~~~v~~v~l~~~~e~~~~R 367 (369)
+|+|.......... .+....... .++++++|.+++.+|
T Consensus 107 ~il~g~~~~~~~~~---~l~~~~~~~-~vi~L~~~~~~~l~r 144 (246)
T 2bbw_A 107 WLLDGFPRTLGQAE---ALDKICEVD-LVISLNIPFETLKDR 144 (246)
T ss_dssp EEEESCCCSHHHHH---HHHTTCCCC-EEEEEECCHHHHHHH
T ss_pred EEEECCCCCHHHHH---HHHhhcCCC-EEEEEECCHHHHHHH
Confidence 78887544432111 222112333 578999999998876
No 214
>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*
Probab=97.51 E-value=1.8e-07 Score=86.56 Aligned_cols=83 Identities=16% Similarity=0.249 Sum_probs=64.4
Q ss_pred ccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHcCCC--eEEEEecCCCCCCCCchhHHHHHHHH
Q psy4598 55 LFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSLNVP--VQMFVATQYDRYRKPVPGMWEYLSQE 132 (369)
Q Consensus 55 ~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l~i~--~~~~~~~~~~~~rKP~~gm~~~~~~~ 132 (369)
++|++.+.|++|++.|++++|+||.+ ...+..+++.+|+. |..++ |..+..++++
T Consensus 137 ~~~g~~~~l~~L~~~g~~~~i~T~~~------------~~~~~~~~~~~gl~~~f~~~~-----------p~~k~~~~~~ 193 (263)
T 2yj3_A 137 PRPNLKDYLEKLKNEGLKIIILSGDK------------EDKVKELSKELNIQEYYSNLS-----------PEDKVRIIEK 193 (263)
Confidence 58999999999999999999999943 22345566777763 32221 4456777777
Q ss_pred hcCCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCc
Q psy4598 133 KNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAF 180 (369)
Q Consensus 133 ~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f 180 (369)
+ +.++++++||||+. +|+.+|.++|+..
T Consensus 194 l----~~~~~~~~~VGD~~----------------~D~~aa~~Agv~v 221 (263)
T 2yj3_A 194 L----KQNGNKVLMIGDGV----------------NDAAALALADVSV 221 (263)
Confidence 5 67889999999998 8999999999864
No 215
>3tr0_A Guanylate kinase, GMP kinase; purines, pyrimidines, nucleosides, nucleotides, transferase; HET: 5GP; 1.85A {Coxiella burnetii}
Probab=98.19 E-value=1.4e-05 Score=70.02 Aligned_cols=89 Identities=17% Similarity=0.200 Sum_probs=54.3
Q ss_pred EEEEEEcCCCCcHHHHHHHHhccCCcEEEeCCcc-------------------hhHHHHH--------------------
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTL-------------------GSWQKCV-------------------- 313 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~~~~~~i~~D~~-------------------~~~~~~~-------------------- 313 (369)
.+|.|+|++||||||+++.|+...+...++.... ..+....
T Consensus 8 ~ii~l~Gp~GsGKSTl~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (205)
T 3tr0_A 8 NLFIISAPSGAGKTSLVRALVKALAEIKISISHTTRPKRPGDQEGVDYFFIDETRFQAMVKEGAFLEHATIYERHYGTEK 87 (205)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHSSSEEECCCEECSCCCTTCCBTTTBEECCHHHHHHHHHHTCEEEEEEETTEEEEEEH
T ss_pred cEEEEECcCCCCHHHHHHHHHhhCCCeEEeceeccCCCchhHhcCceEEeccHHHHHHHHhcCcEEeeeeeecccccchH
Confidence 6899999999999999999987654333332111 0122221
Q ss_pred HHHHHHHhCCCcEEEeCCCCCHHHHHHHHHHHHhcCCeEEEEEEeCCHHHHHHH
Q psy4598 314 SVMKAALDSGLSVVVDNTNPDKESRHRYIEAAKQHGVRCIAVHMNISKEHAKHN 367 (369)
Q Consensus 314 ~~~~~~l~~g~~vIiD~tn~~~~~r~~~~~la~~~~~~v~~v~l~~~~e~~~~R 367 (369)
..+.+.++.|..+|+|.. ... +..+.........++...+|.++..+|
T Consensus 88 ~~i~~~l~~g~~vi~d~~---~~~---~~~~~~~~~~~~~v~~~~~~~e~l~~R 135 (205)
T 3tr0_A 88 DWVLRQLKAGRDVLLEID---WQG---ARQIRELFPPALSIFILPPSIEALRER 135 (205)
T ss_dssp HHHHHHHHTTCEEEEECC---HHH---HHHHHHHCTTCEEEEEECSCHHHHHHH
T ss_pred HHHHHHHHcCCeEEEEEC---HHH---HHHHHHhCCCcEEEEEECcCHHHHHHH
Confidence 356777888999999953 222 223333333334444445568887776
No 216
>3ake_A Cytidylate kinase; CMP kinase, CMP complex, open conformation, nucleotide metab transferase; HET: C5P; 1.50A {Thermus thermophilus} PDB: 3akc_A* 3akd_A*
Probab=98.18 E-value=3.7e-06 Score=73.96 Aligned_cols=35 Identities=23% Similarity=0.265 Sum_probs=32.6
Q ss_pred EEEEEEcCCCCcHHHHHHHHhccCCcEEEeCCcch
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTLG 307 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~~~~~~i~~D~~~ 307 (369)
.+|.++|++||||||+++.|++.+++.+++.|.+.
T Consensus 3 ~~i~i~G~~GsGKst~~~~la~~lg~~~~d~d~~~ 37 (208)
T 3ake_A 3 GIVTIDGPSASGKSSVARRVAAALGVPYLSSGLLY 37 (208)
T ss_dssp SEEEEECSTTSSHHHHHHHHHHHHTCCEEEHHHHH
T ss_pred eEEEEECCCCCCHHHHHHHHHHhcCCceeccchHH
Confidence 48999999999999999999999999999999874
No 217
>3foz_A TRNA delta(2)-isopentenylpyrophosphate transferas; nucleoside modification, isopentenyl-tRNA transferase, transferase-RNA complex; 2.50A {Escherichia coli k-12} PDB: 2zxu_A* 2zm5_A
Probab=98.17 E-value=7.6e-06 Score=77.45 Aligned_cols=38 Identities=24% Similarity=0.391 Sum_probs=35.1
Q ss_pred ccccEEEEEEcCCCCcHHHHHHHHhccCCcEEEeCCcc
Q psy4598 269 AALDSVLIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTL 306 (369)
Q Consensus 269 ~~~~~lIll~G~pGSGKSTla~~L~~~~~~~~i~~D~~ 306 (369)
..++.+|+++||+||||||++..|++.++..+|+.|.+
T Consensus 7 ~~~~~~i~i~GptgsGKt~la~~La~~~~~~iis~Ds~ 44 (316)
T 3foz_A 7 ASLPKAIFLMGPTASGKTALAIELRKILPVELISVDSA 44 (316)
T ss_dssp CCCCEEEEEECCTTSCHHHHHHHHHHHSCEEEEECCTT
T ss_pred CCCCcEEEEECCCccCHHHHHHHHHHhCCCcEEecccc
Confidence 45678999999999999999999999999999999985
No 218
>3v9p_A DTMP kinase, thymidylate kinase; ssgcid, STRU genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia thailandensis}
Probab=98.16 E-value=3.5e-06 Score=76.48 Aligned_cols=97 Identities=19% Similarity=0.201 Sum_probs=60.1
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhccC-------CcEEE-eC---Cc-----chh--------------------HHHHHHH
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKPL-------NYTTV-NR---DT-----LGS--------------------WQKCVSV 315 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~~-------~~~~i-~~---D~-----~~~--------------------~~~~~~~ 315 (369)
..+|++.|++||||||+++.|++.+ +..++ .. +. ++. ++.+.+.
T Consensus 25 g~~I~~eG~~GsGKsT~~~~l~~~l~~~~~~~g~~v~~~rep~~t~~g~~ir~~l~~~~~~~~~~~llf~a~R~~~~~~~ 104 (227)
T 3v9p_A 25 GKFITFEGIDGAGKTTHLQWFCDRLQERLGPAGRHVVVTREPGGTRLGETLREILLNQPMDLETEALLMFAGRREHLALV 104 (227)
T ss_dssp CCEEEEECCC---CHHHHHHHHHHHHHHHGGGTCCEEEEESSSSSHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHT
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHHhhccccceeeeeecCCCCChHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 3699999999999999999998875 32222 11 10 110 1222334
Q ss_pred HHHHHhCCCcEEEeCC------------CCCHHHHHHHHHHHHhcCCeEEEEEEeCCHHHHHHHc
Q psy4598 316 MKAALDSGLSVVVDNT------------NPDKESRHRYIEAAKQHGVRCIAVHMNISKEHAKHNI 368 (369)
Q Consensus 316 ~~~~l~~g~~vIiD~t------------n~~~~~r~~~~~la~~~~~~v~~v~l~~~~e~~~~Rn 368 (369)
++.+++.|..||.|-. +...+....+...+...-.+-.+++|++|++++.+|-
T Consensus 105 i~p~l~~g~~VI~DRy~~S~~ayq~~~~gl~~~~~~~l~~~~~~~~~PDl~I~Ldv~~e~~~~Ri 169 (227)
T 3v9p_A 105 IEPALARGDWVVSDRFTDATFAYQGGGRGLPRDKLEALERWVQGGFQPDLTVLFDVPPQIASARR 169 (227)
T ss_dssp HHHHHHTTCEEEEECCHHHHHHHHTTTTCCCHHHHHHHHHHHHTTCCCSEEEEEECCSSCGGGTT
T ss_pred HHHHHHcCCEEEEeccHhHHHHHhhhccCCCHHHHHHHHHHHhcCCCCCEEEEEeCCHHHHHHHH
Confidence 5667889999999943 2333444444444444445778999999999998874
No 219
>3tau_A Guanylate kinase, GMP kinase; structural genomics, center for structural genomics of infec diseases, csgid, putative guanylate kinase; HET: MSE; 2.05A {Listeria monocytogenes}
Probab=98.15 E-value=9.3e-07 Score=78.75 Aligned_cols=26 Identities=19% Similarity=0.413 Sum_probs=23.4
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhccCC
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKPLN 297 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~~~ 297 (369)
..+|+|+||+||||||+++.|...++
T Consensus 8 g~~i~l~GpsGsGKsTl~~~L~~~~~ 33 (208)
T 3tau_A 8 GLLIVLSGPSGVGKGTVREAVFKDPE 33 (208)
T ss_dssp CCEEEEECCTTSCHHHHHHHHHHSTT
T ss_pred CcEEEEECcCCCCHHHHHHHHHhhCC
Confidence 47899999999999999999998763
No 220
>4i1u_A Dephospho-COA kinase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.05A {Burkholderia vietnamiensis} PDB: 4i1v_A*
Probab=98.08 E-value=1.5e-05 Score=71.43 Aligned_cols=37 Identities=19% Similarity=0.268 Sum_probs=32.9
Q ss_pred ccccEEEEEEcCCCCcHHHHHHHHhccCCcEEEeCCcc
Q psy4598 269 AALDSVLIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTL 306 (369)
Q Consensus 269 ~~~~~lIll~G~pGSGKSTla~~L~~~~~~~~i~~D~~ 306 (369)
...+-.|-|+|.+||||||+++.|++ +|+.+|+.|.+
T Consensus 6 ~~~~~~iglTGgigsGKStv~~~l~~-~g~~vidaD~i 42 (210)
T 4i1u_A 6 HHHMYAIGLTGGIGSGKTTVADLFAA-RGASLVDTDLI 42 (210)
T ss_dssp CCSCCEEEEECCTTSCHHHHHHHHHH-TTCEEEEHHHH
T ss_pred ccceeEEEEECCCCCCHHHHHHHHHH-CCCcEEECcHH
Confidence 34456899999999999999999998 99999999986
No 221
>3ld9_A DTMP kinase, thymidylate kinase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 2.15A {Ehrlichia chaffeensis}
Probab=98.07 E-value=1.2e-05 Score=72.70 Aligned_cols=101 Identities=15% Similarity=0.132 Sum_probs=54.8
Q ss_pred hccccccEEEEEEcCCCCcHHHHHHHHhccCCc-----EEE-eC--Cc------ch---------------------hHH
Q psy4598 266 VMKAALDSVLIMIGSQGSGKSSFVSTYLKPLNY-----TTV-NR--DT------LG---------------------SWQ 310 (369)
Q Consensus 266 ~~~~~~~~lIll~G~pGSGKSTla~~L~~~~~~-----~~i-~~--D~------~~---------------------~~~ 310 (369)
.|....+.+|++.|++||||||+++.|++.++. +.+ .. +. ++ .++
T Consensus 15 ~~~~~~~~~i~~~G~~g~GKst~~~~l~~~l~~~~g~~v~~~treP~~t~~g~~ir~~l~~~~~~~~~~e~llf~a~R~~ 94 (223)
T 3ld9_A 15 QTQGPGSMFITFEGIDGSGKTTQSHLLAEYLSEIYGVNNVVLTREPGGTLLNESVRNLLFKAQGLDSLSELLFFIAMRRE 94 (223)
T ss_dssp ----CCCEEEEEECSTTSSHHHHHHHHHHHHHHHHCGGGEEEEESSCSSHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHH
T ss_pred cccCCCCeEEEEECCCCCCHHHHHHHHHHHHhhccCceeeEeeeCCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHHHHH
Confidence 444556789999999999999999999886532 222 11 10 10 012
Q ss_pred HHHHHHHHHHhCCCcEEEeCCCC------------CHHHHHHHHHHHHhcCCeEEEEEEeCCHHHHHHH
Q psy4598 311 KCVSVMKAALDSGLSVVVDNTNP------------DKESRHRYIEAAKQHGVRCIAVHMNISKEHAKHN 367 (369)
Q Consensus 311 ~~~~~~~~~l~~g~~vIiD~tn~------------~~~~r~~~~~la~~~~~~v~~v~l~~~~e~~~~R 367 (369)
...+.++.+++.|..||.|-... ..+....+...+.. -.+=.++++++|.+++.+|
T Consensus 95 ~~~~~I~paL~~g~~VI~DRy~~S~~Ayq~~~~g~~~~~~~~l~~~~~~-~~PDl~I~Ldv~~e~~~~R 162 (223)
T 3ld9_A 95 HFVKIIKPSLMQKKIVICDRFIDSTIAYQGYGQGIDCSLIDQLNDLVID-VYPDITFIIDVDINESLSR 162 (223)
T ss_dssp HHHHTHHHHHHTTCEEEEESCHHHHHHHHTTTTCCCHHHHHHHHHHHCS-SCCSEEEEEECC-------
T ss_pred HHHHHHHHHHhcCCeEEEccchhhHHHhccccCCccHHHHHHHHHHhhc-CCCCeEEEEeCCHHHHHHH
Confidence 22233556788999999986421 12222223333332 3455799999999999887
No 222
>4tmk_A Protein (thymidylate kinase); ATP:DTMP phosphotransferase, transferase; HET: T5A; 1.98A {Escherichia coli} SCOP: c.37.1.1 PDB: 5tmp_A*
Probab=98.03 E-value=1e-05 Score=72.62 Aligned_cols=95 Identities=18% Similarity=0.240 Sum_probs=61.8
Q ss_pred EEEEEEcCCCCcHHHHHHHHhccC---Cc--EEEeCC-----------------------cch-----------hHHHHH
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKPL---NY--TTVNRD-----------------------TLG-----------SWQKCV 313 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~~---~~--~~i~~D-----------------------~~~-----------~~~~~~ 313 (369)
.+|++.|++||||||.++.|.+.+ +. +++... .+. .++.+.
T Consensus 4 ~~i~~eG~~gsGKsT~~~~l~~~l~~~~~~~v~~~rep~~t~~g~~ir~~l~~~~~~~~~~~~~~~e~lL~~A~R~~~~~ 83 (213)
T 4tmk_A 4 KYIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLLLDIKSVGDEVITDKAEVLMFYAARVQLVE 83 (213)
T ss_dssp CEEEEEECTTSCHHHHHHHHHHHHHHTTCCCEEEEESSCSSHHHHHHHHHHHSTTTTTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHHHcCCCcceeeeCCCCCHHHHHHHHHHhcccccccccCChHHHHHHHHHHHHHHHH
Confidence 689999999999999999998764 32 222111 110 012223
Q ss_pred HHHHHHHhCCCcEEEeCC------------CCCHHHHHHHHHHHHhcCCeEEEEEEeCCHHHHHHH
Q psy4598 314 SVMKAALDSGLSVVVDNT------------NPDKESRHRYIEAAKQHGVRCIAVHMNISKEHAKHN 367 (369)
Q Consensus 314 ~~~~~~l~~g~~vIiD~t------------n~~~~~r~~~~~la~~~~~~v~~v~l~~~~e~~~~R 367 (369)
+.++.+++.|..||.|-. ....+....+...+...-.+-.++++++|++++.+|
T Consensus 84 ~~i~paL~~g~~VI~DRy~~S~~AYq~~~~g~~~~~~~~l~~~~~~~~~PDl~i~Ldv~~e~~~~R 149 (213)
T 4tmk_A 84 TVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQHMLATLRDAVLGDFRPDLTLYLDVTPEVGLKR 149 (213)
T ss_dssp HTHHHHHHTTCEEEEECCHHHHHHHTTTTTCCCHHHHHHHHHHHHTTCCCSEEEEEECCHHHHHHH
T ss_pred HHHHHHHHCCCEEEEcCcHhHHHHHcccccCCCHHHHHHHHHHhccCCCCCEEEEEeCCHHHHHHH
Confidence 446677899999999953 223333333444444334567899999999999887
No 223
>3r20_A Cytidylate kinase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, ADP, DCMP, D transferase; 2.00A {Mycobacterium smegmatis} SCOP: c.37.1.0 PDB: 3r8c_A 4die_A*
Probab=98.02 E-value=1e-05 Score=73.67 Aligned_cols=36 Identities=22% Similarity=0.301 Sum_probs=33.0
Q ss_pred ccEEEEEEcCCCCcHHHHHHHHhccCCcEEEeCCcc
Q psy4598 271 LDSVLIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTL 306 (369)
Q Consensus 271 ~~~lIll~G~pGSGKSTla~~L~~~~~~~~i~~D~~ 306 (369)
++.+|.+.|+|||||||+++.|++.+++.+++.|.+
T Consensus 8 ~~~~i~i~G~~GsGKsTla~~la~~lg~~~~d~g~~ 43 (233)
T 3r20_A 8 GSLVVAVDGPAGTGKSSVSRGLARALGARYLDTGAM 43 (233)
T ss_dssp -CCEEEEECCTTSSHHHHHHHHHHHHTCEEEEHHHH
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHhCCCcccCCcH
Confidence 456899999999999999999999999999999886
No 224
>3fdi_A Uncharacterized protein; cytidylate kinase like protein, PSI, MCSG, PRK04182 class ME structural genomics, protein structure initiative; 2.20A {Eubacterium ventriosum}
Probab=98.01 E-value=6e-06 Score=73.38 Aligned_cols=87 Identities=10% Similarity=0.066 Sum_probs=58.0
Q ss_pred EEEEEEcCCCCcHHHHHHHHhccCCcEEEeCCcchh--------------H-------H------------------HHH
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTLGS--------------W-------Q------------------KCV 313 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~~~~~~i~~D~~~~--------------~-------~------------------~~~ 313 (369)
.+|.|.|++||||||+++.|++.+++.+++.+.++. + . ...
T Consensus 7 ~iI~i~g~~GsGk~ti~~~la~~lg~~~~D~~~~~~~a~~~g~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (201)
T 3fdi_A 7 IIIAIGREFGSGGHLVAKKLAEHYNIPLYSKELLDEVAKDGRYSKEVLERFDEKPMNFAFIPVPAGGTTISLEQDIAIRQ 86 (201)
T ss_dssp CEEEEEECTTSSHHHHHHHHHHHTTCCEECHHHHHHTTCC---------------------------------CHHHHHH
T ss_pred eEEEEeCCCCCCHHHHHHHHHHHhCcCEECHHHHHHHHHhcCCCHHHHHHHhhhchhHHHHHhccccccccccHHHHHHH
Confidence 589999999999999999999999999998554320 0 0 011
Q ss_pred HHHHHHHh--CCCcEEEeCCCCCHHHHHHHHHHHHhcCCeEEEEEEeCCHHHHHHHc
Q psy4598 314 SVMKAALD--SGLSVVVDNTNPDKESRHRYIEAAKQHGVRCIAVHMNISKEHAKHNI 368 (369)
Q Consensus 314 ~~~~~~l~--~g~~vIiD~tn~~~~~r~~~~~la~~~~~~v~~v~l~~~~e~~~~Rn 368 (369)
..+...+. ...++|+++.... + +.+.. -....||+++|.++..+|-
T Consensus 87 ~~~i~~la~~~~~~~Vi~Gr~g~------~--vl~~~-~~~~~V~L~A~~e~r~~R~ 134 (201)
T 3fdi_A 87 FNFIRKKANEEKESFVIVGRCAE------E--ILSDN-PNMISAFILGDKDTKTKRV 134 (201)
T ss_dssp HHHHHHHHHTSCCCEEEESTTHH------H--HTTTC-TTEEEEEEEECHHHHHHHH
T ss_pred HHHHHHHHhhcCCCEEEEECCcc------h--hcCCC-CCeEEEEEECCHHHHHHHH
Confidence 22222234 4557888876421 1 11221 2367899999999988873
No 225
>2j41_A Guanylate kinase; GMP, GMK, transferase, ATP-binding, nucleotide- binding; HET: 5GP; 1.9A {Staphylococcus aureus}
Probab=98.01 E-value=3.2e-05 Score=67.73 Aligned_cols=26 Identities=15% Similarity=0.342 Sum_probs=23.2
Q ss_pred ccEEEEEEcCCCCcHHHHHHHHhccC
Q psy4598 271 LDSVLIMIGSQGSGKSSFVSTYLKPL 296 (369)
Q Consensus 271 ~~~lIll~G~pGSGKSTla~~L~~~~ 296 (369)
...+|.|+|+|||||||+++.|+..+
T Consensus 5 ~g~~i~l~G~~GsGKSTl~~~L~~~~ 30 (207)
T 2j41_A 5 KGLLIVLSGPSGVGKGTVRKRIFEDP 30 (207)
T ss_dssp CCCEEEEECSTTSCHHHHHHHHHHCT
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHhh
Confidence 34689999999999999999998875
No 226
>1kgd_A CASK, peripheral plasma membrane CASK; maguk, guanylate kinase like domain, protein binding; 1.31A {Homo sapiens} SCOP: c.37.1.1
Probab=97.99 E-value=5.7e-06 Score=71.81 Aligned_cols=25 Identities=20% Similarity=0.521 Sum_probs=22.2
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhccC
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKPL 296 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~~ 296 (369)
..+++|+||+||||||+++.|....
T Consensus 5 g~~i~i~GpsGsGKSTL~~~L~~~~ 29 (180)
T 1kgd_A 5 RKTLVLLGAHGVGRRHIKNTLITKH 29 (180)
T ss_dssp CCEEEEECCTTSSHHHHHHHHHHHC
T ss_pred CCEEEEECCCCCCHHHHHHHHHhhC
Confidence 3689999999999999999998754
No 227
>1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18
Probab=97.97 E-value=7.8e-06 Score=67.07 Aligned_cols=50 Identities=28% Similarity=0.417 Sum_probs=39.2
Q ss_pred eEEEEecCCceeecCCCCCCCCCccccccccccHHHHHHHHHHCCcEEEEEecCCC
Q psy4598 26 KIASFDLDGTLITTKSGKVFPVDTHDWKLLFSNIESVLKQYLDDGYKLVIFTNQGA 81 (369)
Q Consensus 26 k~~~fDlDgTLi~~~sg~~~~~~~~d~~~~~p~v~~~L~~L~~~G~~i~i~TNq~g 81 (369)
|+++|||||||+.+..+ .| .+. .+.|++.++|++|+++|++++|+|+.+.
T Consensus 2 k~i~~DlDGTL~~~~~~-~~----~~~-~~~~~~~~~l~~l~~~Gi~~~iaTGR~~ 51 (126)
T 1xpj_A 2 KKLIVDLDGTLTQANTS-DY----RNV-LPRLDVIEQLREYHQLGFEIVISTARNM 51 (126)
T ss_dssp CEEEECSTTTTBCCCCS-CG----GGC-CBCHHHHHHHHHHHHTTCEEEEEECTTT
T ss_pred CEEEEecCCCCCCCCCC-cc----ccC-CCCHHHHHHHHHHHhCCCeEEEEeCCCh
Confidence 78999999999975432 12 111 2578999999999999999999999753
No 228
>3hjn_A DTMP kinase, thymidylate kinase; ATP-binding, nucleotide biosynth nucleotide-binding, transferase, structural genomics; HET: ADP TYD; 2.10A {Thermotoga maritima}
Probab=97.95 E-value=6.6e-05 Score=66.37 Aligned_cols=95 Identities=21% Similarity=0.248 Sum_probs=60.8
Q ss_pred EEEEEcCCCCcHHHHHHHHhccC---CcEEE-eCC----cc----h-------------------hHHHHHHHHHHHHhC
Q psy4598 274 VLIMIGSQGSGKSSFVSTYLKPL---NYTTV-NRD----TL----G-------------------SWQKCVSVMKAALDS 322 (369)
Q Consensus 274 lIll~G~pGSGKSTla~~L~~~~---~~~~i-~~D----~~----~-------------------~~~~~~~~~~~~l~~ 322 (369)
+|++-|+.||||||.++.|++.+ +..++ ... .+ + ...........++..
T Consensus 2 fI~~EG~DGsGKsTq~~~L~~~L~~~g~~v~~treP~~t~~~~~ir~~l~~~~~~~~~~~ll~~a~r~~~~~~I~~~L~~ 81 (197)
T 3hjn_A 2 FITFEGIDGSGKSTQIQLLAQYLEKRGKKVILKREPGGTETGEKIRKILLEEEVTPKAELFLFLASRNLLVTEIKQYLSE 81 (197)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESSCSSHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEECCCCCcHHHHHHHHhhcccCChHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 68899999999999999998764 32222 111 11 0 012234556677889
Q ss_pred CCcEEEeCCC------------CCHHHHHHHHHHHHhcCCeEEEEEEeCCHHHHHHHc
Q psy4598 323 GLSVVVDNTN------------PDKESRHRYIEAAKQHGVRCIAVHMNISKEHAKHNI 368 (369)
Q Consensus 323 g~~vIiD~tn------------~~~~~r~~~~~la~~~~~~v~~v~l~~~~e~~~~Rn 368 (369)
|..||.|-.. ...+.-..+...+...-.+-..+++++|++++.+|.
T Consensus 82 g~~Vi~DRy~~S~~ayq~~~~~~~~~~i~~l~~~~~~~~~PDl~i~Ld~~~e~~~~R~ 139 (197)
T 3hjn_A 82 GYAVLLDRYTDSSVAYQGFGRNLGKEIVEELNDFATDGLIPDLTFYIDVDVETALKRK 139 (197)
T ss_dssp TCEEEEESCHHHHHHHHTTTTCSCHHHHHHHHHHHHTTCCCSEEEEEECCHHHHHHHC
T ss_pred CCeEEecccchHHHHHHHhccCCCHHHHHHHHhhhhcCCCCCceeecCcChHHHHHhC
Confidence 9999998542 222333333333433334667899999999999884
No 229
>1p5z_B DCK, deoxycytidine kinase; nucleoside kinase, P-loop, ARAC, cytarabine, transferase; HET: AR3 ADP; 1.60A {Homo sapiens} SCOP: c.37.1.1 PDB: 1p60_A* 1p61_B* 1p62_B* 2a7q_A* 2qrn_A* 2qro_A* 3exk_A* 3hp1_A* 2no7_A* 2no1_A* 2no6_A* 2no0_A* 2no9_A* 2noa_A* 2zi5_A* 2zi4_A* 2zi6_A* 2zi7_B* 2zia_A* 3kfx_A* ...
Probab=97.94 E-value=9.7e-06 Score=74.65 Aligned_cols=31 Identities=23% Similarity=0.336 Sum_probs=27.2
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhccC-CcEEEe
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKPL-NYTTVN 302 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~~-~~~~i~ 302 (369)
+.+|+|.|++||||||+++.|++.+ ++.++.
T Consensus 24 ~~~I~ieG~~GsGKST~~~~L~~~l~~~~~i~ 55 (263)
T 1p5z_B 24 IKKISIEGNIAAGKSTFVNILKQLCEDWEVVP 55 (263)
T ss_dssp CEEEEEECSTTSSHHHHHTTTGGGCTTEEEEC
T ss_pred ceEEEEECCCCCCHHHHHHHHHHhcCCCEEEe
Confidence 5799999999999999999999998 566663
No 230
>1ex7_A Guanylate kinase; substrate-induced FIT, domain movement, GMP, ATP, substrate specificity, X-RAY diffraction, transferase; HET: 5GP; 1.90A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 1ex6_A* 1gky_A* 3sqk_A 4f4j_A
Probab=97.93 E-value=1.9e-05 Score=69.40 Aligned_cols=88 Identities=19% Similarity=0.300 Sum_probs=51.8
Q ss_pred EEEEEcCCCCcHHHHHHHHhccCC-----------------------cEEEeCCcchh-----------------HHHHH
Q psy4598 274 VLIMIGSQGSGKSSFVSTYLKPLN-----------------------YTTVNRDTLGS-----------------WQKCV 313 (369)
Q Consensus 274 lIll~G~pGSGKSTla~~L~~~~~-----------------------~~~i~~D~~~~-----------------~~~~~ 313 (369)
.|+|+||+||||||+.+.|.+..+ +.+++.+.+.. |-...
T Consensus 3 pIVi~GPSG~GK~Tl~~~L~~~~~~~~~~svs~TTR~pR~gE~~G~dY~Fvs~~eF~~~i~~g~flE~~~~~g~~YGt~~ 82 (186)
T 1ex7_A 3 PIVISGPSGTGKSTLLKKLFAEYPDSFGFSVSSTTRTPRAGEVNGKDYNFVSVDEFKSMIKNNEFIEWAQFSGNYYGSTV 82 (186)
T ss_dssp CEEEECCTTSSHHHHHHHHHHHCTTTEEECCCEECSCCCTTCCBTTTBEECCHHHHHHHHHTTCEEEEEEETTEEEEEEH
T ss_pred EEEEECCCCCCHHHHHHHHHHhCCCCeEEEEEEeccCCCCCCcCCceeEeecHHHHHHHHHcCCEEEEEEEcCceeeeec
Confidence 489999999999999999986542 11222222210 11124
Q ss_pred HHHHHHHhCCCcEEEeCCCCCHHHHHHHHHHHHhcCCeEEEEEE-eCCHHHHHHH
Q psy4598 314 SVMKAALDSGLSVVVDNTNPDKESRHRYIEAAKQHGVRCIAVHM-NISKEHAKHN 367 (369)
Q Consensus 314 ~~~~~~l~~g~~vIiD~tn~~~~~r~~~~~la~~~~~~v~~v~l-~~~~e~~~~R 367 (369)
..+...+++|+.||+|-. .+.-.. +-+..+.....|++ .++.++..+|
T Consensus 83 ~~v~~~l~~g~~vil~id---~~g~~~---~k~~~~~~~~~Ifi~pps~e~L~~R 131 (186)
T 1ex7_A 83 ASVKQVSKSGKTCILDID---MQGVKS---VKAIPELNARFLFIAPPSVEDLKKR 131 (186)
T ss_dssp HHHHHHHHHTSEEEEECC---HHHHHH---HHTCGGGCCEEEEEECSCHHHHHHH
T ss_pred ceeeehhhCCCEEEecCC---HHHHHH---HHHhcccCceEEEEeCCCHHHHHHH
Confidence 567778899999999953 232222 22223433344444 5556777666
No 231
>4e22_A Cytidylate kinase; P-loop, CMP/ATP binding, transferase; 2.32A {Yersinia pseudotuberculosis}
Probab=97.93 E-value=4.4e-05 Score=69.98 Aligned_cols=35 Identities=20% Similarity=0.451 Sum_probs=32.0
Q ss_pred EEEEEEcCCCCcHHHHHHHHhccCCcEEEeCCcch
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTLG 307 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~~~~~~i~~D~~~ 307 (369)
.+|.|+|++||||||+++.|++.+++.+++.+.+.
T Consensus 28 ~~I~I~G~~GsGKSTl~k~La~~Lg~~~~d~g~i~ 62 (252)
T 4e22_A 28 PVITVDGPSGAGKGTLCKALAESLNWRLLDSGAIY 62 (252)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHTTCEEEEHHHHH
T ss_pred cEEEEECCCCCCHHHHHHHHHHhcCCCcCCCCcee
Confidence 58999999999999999999999999999887753
No 232
>3exa_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacillus halodurans} PDB: 2qgn_A
Probab=97.91 E-value=2.4e-05 Score=74.21 Aligned_cols=35 Identities=20% Similarity=0.393 Sum_probs=33.0
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhccCCcEEEeCCcc
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTL 306 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~~~~~~i~~D~~ 306 (369)
+.+|+++||+||||||++..|++.++..+||.|.+
T Consensus 3 ~~~i~i~GptgsGKt~la~~La~~~~~~iis~Ds~ 37 (322)
T 3exa_A 3 EKLVAIVGPTAVGKTKTSVMLAKRLNGEVISGDSM 37 (322)
T ss_dssp CEEEEEECCTTSCHHHHHHHHHHTTTEEEEECCGG
T ss_pred CcEEEEECCCcCCHHHHHHHHHHhCccceeecCcc
Confidence 46899999999999999999999999999999986
No 233
>1gtv_A TMK, thymidylate kinase; transferase, transferase (ATP:TMP phosphotransferase); HET: TYD TMP; 1.55A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1g3u_A* 1gsi_A* 1mrn_A* 1mrs_A* 1n5i_A* 1n5j_A* 1n5k_A* 1n5l_A* 1w2g_A* 1w2h_A*
Probab=97.90 E-value=1.4e-06 Score=77.12 Aligned_cols=23 Identities=22% Similarity=0.489 Sum_probs=21.3
Q ss_pred EEEEEcCCCCcHHHHHHHHhccC
Q psy4598 274 VLIMIGSQGSGKSSFVSTYLKPL 296 (369)
Q Consensus 274 lIll~G~pGSGKSTla~~L~~~~ 296 (369)
+|+|.|++||||||+++.|++.+
T Consensus 2 ~I~i~G~~GsGKsTl~~~L~~~l 24 (214)
T 1gtv_A 2 LIAIEGVDGAGKRTLVEKLSGAF 24 (214)
T ss_dssp EEEEEEEEEEEHHHHHHHHHHHH
T ss_pred EEEEEcCCCCCHHHHHHHHHHHH
Confidence 78999999999999999998865
No 234
>3hdt_A Putative kinase; structura genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 2.79A {Clostridium symbiosum atcc 14940}
Probab=97.90 E-value=2.4e-05 Score=70.67 Aligned_cols=35 Identities=17% Similarity=0.208 Sum_probs=32.3
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhccCCcEEEeCCcc
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTL 306 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~~~~~~i~~D~~ 306 (369)
+.+|.+.|++||||||+++.|++.+++.+++.|.+
T Consensus 14 ~~iI~i~g~~gsGk~~i~~~la~~lg~~~~d~~~~ 48 (223)
T 3hdt_A 14 NLIITIEREYGSGGRIVGKKLAEELGIHFYDDDIL 48 (223)
T ss_dssp CEEEEEEECTTSCHHHHHHHHHHHHTCEEECHHHH
T ss_pred CeEEEEeCCCCCCHHHHHHHHHHHcCCcEEcHHHH
Confidence 36899999999999999999999999999998876
No 235
>1q3t_A Cytidylate kinase; nucleotide monophosphate kinase, CMP kinase, transferase; NMR {Streptococcus pneumoniae} SCOP: c.37.1.1
Probab=97.89 E-value=5.2e-05 Score=68.53 Aligned_cols=38 Identities=18% Similarity=0.258 Sum_probs=33.8
Q ss_pred cccEEEEEEcCCCCcHHHHHHHHhccCCcEEEeCCcch
Q psy4598 270 ALDSVLIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTLG 307 (369)
Q Consensus 270 ~~~~lIll~G~pGSGKSTla~~L~~~~~~~~i~~D~~~ 307 (369)
..+.+|.|+|++||||||+++.|++.+++.+++.|.+.
T Consensus 14 ~~~~~i~i~G~~gsGKst~~~~l~~~lg~~~~d~d~~~ 51 (236)
T 1q3t_A 14 MKTIQIAIDGPASSGKSTVAKIIAKDFGFTYLDTGAMY 51 (236)
T ss_dssp CCCCEEEEECSSCSSHHHHHHHHHHHHCCEEEEHHHHH
T ss_pred cCCcEEEEECCCCCCHHHHHHHHHHHcCCceecCCCee
Confidence 34468999999999999999999999999999998864
No 236
>1uf9_A TT1252 protein; P-loop, nucleotide binding domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ATP; 2.80A {Thermus thermophilus} SCOP: c.37.1.1
Probab=97.84 E-value=6.9e-06 Score=71.89 Aligned_cols=35 Identities=26% Similarity=0.374 Sum_probs=32.1
Q ss_pred ccEEEEEEcCCCCcHHHHHHHHhccCCcEEEeCCcc
Q psy4598 271 LDSVLIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTL 306 (369)
Q Consensus 271 ~~~lIll~G~pGSGKSTla~~L~~~~~~~~i~~D~~ 306 (369)
.+.+|.|+|++||||||+++.|++. ++.+++.|.+
T Consensus 7 ~~~~I~i~G~~GsGKST~~~~La~~-g~~~id~d~~ 41 (203)
T 1uf9_A 7 HPIIIGITGNIGSGKSTVAALLRSW-GYPVLDLDAL 41 (203)
T ss_dssp CCEEEEEEECTTSCHHHHHHHHHHT-TCCEEEHHHH
T ss_pred CceEEEEECCCCCCHHHHHHHHHHC-CCEEEcccHH
Confidence 3578999999999999999999998 9999999976
No 237
>3a00_A Guanylate kinase, GMP kinase; domain movement, dimerization, acetylation, ATP-binding, nucleotide-binding, phosphoprotein, transferase; 1.80A {Saccharomyces cerevisiae} PDB: 1ex6_A* 1ex7_A 1gky_A* 2zzz_A 3sqk_A 4f4j_A 2zzy_A
Probab=97.79 E-value=8e-06 Score=71.18 Aligned_cols=88 Identities=17% Similarity=0.292 Sum_probs=49.2
Q ss_pred EEEEEEcCCCCcHHHHHHHHhccCCc------EE---------EeCCcc-----hhHHHH--------------------
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKPLNY------TT---------VNRDTL-----GSWQKC-------------------- 312 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~~~~------~~---------i~~D~~-----~~~~~~-------------------- 312 (369)
.++.|+||+||||||+.+.|...+.. .+ ++...+ ..+..+
T Consensus 2 ~ii~l~GpsGaGKsTl~~~L~~~~~~~~~~~~~~~tr~~~~ge~~g~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~yg~~ 81 (186)
T 3a00_A 2 RPIVISGPSGTGKSTLLKKLFAEYPDSFGFSVSSTTRTPRAGEVNGKDYNFVSVDEFKSMIKNNEFIEWAQFSGNYYGST 81 (186)
T ss_dssp CCEEEESSSSSSHHHHHHHHHHHCGGGEECCCEEECSCCCTTCCBTTTBEECCHHHHHHHHHTTCEEEEEEETTEEEEEE
T ss_pred CEEEEECCCCCCHHHHHHHHHhhCCccceEEeeccccCCCCCccCCeeeeecCHHHHHHHHhhcceeeEEEEeceeccCc
Confidence 46889999999999999999854320 00 011111 011111
Q ss_pred HHHHHHHHhCCCcEEEeCCCCCHHHHHHHHHHHHh-cCCeEEEEEEeCCH-HHHHHH
Q psy4598 313 VSVMKAALDSGLSVVVDNTNPDKESRHRYIEAAKQ-HGVRCIAVHMNISK-EHAKHN 367 (369)
Q Consensus 313 ~~~~~~~l~~g~~vIiD~tn~~~~~r~~~~~la~~-~~~~v~~v~l~~~~-e~~~~R 367 (369)
.+.+.+.++.|..+|+|... ..... .+. .+....+|++.+|. ++..+|
T Consensus 82 ~~~i~~~l~~g~~~il~~~~---~g~~~----l~~~~~~~~~~i~i~~p~~~~l~~R 131 (186)
T 3a00_A 82 VASVKQVSKSGKTCILDIDM---QGVKS----VKAIPELNARFLFIAPPSVEDLKKR 131 (186)
T ss_dssp HHHHHHHHHTTCEEEEECCH---HHHHH----HHTCGGGCCEEEEEECSCC------
T ss_pred HHHHHHHHHcCCeEEEEEcH---HHHHH----HHHhcCCCeEEEEEECcCHHHHHHH
Confidence 24567778899999999643 22222 233 34555678888865 666555
No 238
>1rz3_A Hypothetical protein rbstp0775; MCSG, structural genomics, PSI, protein structure initiative; 1.90A {Geobacillus stearothermophilus} SCOP: c.37.1.6
Probab=97.79 E-value=1.2e-05 Score=70.99 Aligned_cols=38 Identities=24% Similarity=0.218 Sum_probs=30.3
Q ss_pred ccccEEEEEEcCCCCcHHHHHHHHhccC-----CcEEEeCCcc
Q psy4598 269 AALDSVLIMIGSQGSGKSSFVSTYLKPL-----NYTTVNRDTL 306 (369)
Q Consensus 269 ~~~~~lIll~G~pGSGKSTla~~L~~~~-----~~~~i~~D~~ 306 (369)
...+.+|.++|++||||||+++.|...+ .+.+++.|.+
T Consensus 19 ~~~~~~i~i~G~~GsGKstl~~~l~~~~~~~~~~v~~~~~d~~ 61 (201)
T 1rz3_A 19 TAGRLVLGIDGLSRSGKTTLANQLSQTLREQGISVCVFHMDDH 61 (201)
T ss_dssp CSSSEEEEEEECTTSSHHHHHHHHHHHHHHTTCCEEEEEGGGG
T ss_pred cCCCeEEEEECCCCCCHHHHHHHHHHHHhhcCCeEEEeccCcc
Confidence 4456899999999999999999998743 3556677765
No 239
>3d3q_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2; 2.70A {Staphylococcus epidermidis atcc 12228}
Probab=97.78 E-value=1.6e-05 Score=76.27 Aligned_cols=36 Identities=19% Similarity=0.385 Sum_probs=33.6
Q ss_pred ccEEEEEEcCCCCcHHHHHHHHhccCCcEEEeCCcc
Q psy4598 271 LDSVLIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTL 306 (369)
Q Consensus 271 ~~~lIll~G~pGSGKSTla~~L~~~~~~~~i~~D~~ 306 (369)
|+.+|+|+|++||||||+|..|++.++..+|+.|.+
T Consensus 6 m~~lI~I~GptgSGKTtla~~La~~l~~~iis~Ds~ 41 (340)
T 3d3q_A 6 KPFLIVIVGPTASGKTELSIEVAKKFNGEIISGDSM 41 (340)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHHHTTEEEEECCSS
T ss_pred CCceEEEECCCcCcHHHHHHHHHHHcCCceeccccc
Confidence 457999999999999999999999999999999986
No 240
>1cke_A CK, MSSA, protein (cytidine monophosphate kinase); nucleotide monophosphate kinase,, transferase; 1.75A {Escherichia coli} SCOP: c.37.1.1 PDB: 1kdo_A* 1kdp_A* 1kdr_A* 1kdt_A* 2cmk_A* 2fem_A 2feo_A*
Probab=97.76 E-value=9.4e-06 Score=72.50 Aligned_cols=36 Identities=17% Similarity=0.411 Sum_probs=32.7
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhccCCcEEEeCCcch
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTLG 307 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~~~~~~i~~D~~~ 307 (369)
+..|.|+|+|||||||+++.|++.+++.+++.|.+.
T Consensus 5 ~~~i~i~G~~GsGKSTl~~~L~~~~g~~~~d~g~i~ 40 (227)
T 1cke_A 5 APVITIDGPSGAGKGTLCKAMAEALQWHLLDSGAIY 40 (227)
T ss_dssp SCEEEEECCTTSSHHHHHHHHHHHHTCEEEEHHHHH
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHhCCCcccCccee
Confidence 357999999999999999999999999999998864
No 241
>3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118}
Probab=97.73 E-value=7.4e-06 Score=73.07 Aligned_cols=104 Identities=16% Similarity=0.193 Sum_probs=72.7
Q ss_pred CCceEEEEecCCceeecCCCCCCCCCcccc-ccccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHH
Q psy4598 23 NSAKIASFDLDGTLITTKSGKVFPVDTHDW-KLLFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIK 101 (369)
Q Consensus 23 ~~~k~~~fDlDgTLi~~~sg~~~~~~~~d~-~~~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~ 101 (369)
.+.+.+.+|||+||+.+.... . ..| ...-||+.+.|+.+. ++|.|+|+|... +..++.+++
T Consensus 32 ~~~~tLVLDLDeTLvh~~~~~---~--~~~~v~~RPgl~eFL~~l~-~~yeivI~Tas~------------~~ya~~vl~ 93 (204)
T 3qle_A 32 QRPLTLVITLEDFLVHSEWSQ---K--HGWRTAKRPGADYFLGYLS-QYYEIVLFSSNY------------MMYSDKIAE 93 (204)
T ss_dssp CCSEEEEEECBTTTEEEEEET---T--TEEEEEECTTHHHHHHHHT-TTEEEEEECSSC------------HHHHHHHHH
T ss_pred CCCeEEEEeccccEEeeeccc---c--CceeEEeCCCHHHHHHHHH-hCCEEEEEcCCc------------HHHHHHHHH
Confidence 456899999999999875311 1 123 346899999999998 789999999842 445677778
Q ss_pred HcCC---CeEEEEecCCCCCCCCchhHHHHHHHHhcCCccccCCccEEeeCcc
Q psy4598 102 SLNV---PVQMFVATQYDRYRKPVPGMWEYLSQEKNGDLAIDISQSFYAGDAA 151 (369)
Q Consensus 102 ~l~i---~~~~~~~~~~~~~rKP~~gm~~~~~~~~~~~~~i~~~~s~~VGD~~ 151 (369)
.++. .|...+..+.|.+ ..|.+...++. ++.+++++++|-|+.
T Consensus 94 ~LDp~~~~f~~rl~R~~c~~---~~g~y~KdL~~----Lgrdl~~vIiIDDsp 139 (204)
T 3qle_A 94 KLDPIHAFVSYNLFKEHCVY---KDGVHIKDLSK----LNRDLSKVIIIDTDP 139 (204)
T ss_dssp HTSTTCSSEEEEECGGGSEE---ETTEEECCGGG----SCSCGGGEEEEESCT
T ss_pred HhCCCCCeEEEEEEecceeE---ECCeeeecHHH----hCCChHHEEEEECCH
Confidence 7775 3665454444433 23444444444 367899999999998
No 242
>1vht_A Dephospho-COA kinase; structural genomics, transferase; HET: BA3; 1.59A {Escherichia coli} SCOP: c.37.1.1 PDB: 1vhl_A* 1viy_A 1t3h_A 1n3b_A
Probab=97.70 E-value=1.8e-05 Score=70.49 Aligned_cols=34 Identities=24% Similarity=0.524 Sum_probs=30.9
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhccCCcEEEeCCcc
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTL 306 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~~~~~~i~~D~~ 306 (369)
+.+|.|+|++||||||+++.|++ +++.+++.|.+
T Consensus 4 ~~~I~i~G~~GSGKST~~~~L~~-lg~~~id~D~~ 37 (218)
T 1vht_A 4 RYIVALTGGIGSGKSTVANAFAD-LGINVIDADII 37 (218)
T ss_dssp CEEEEEECCTTSCHHHHHHHHHH-TTCEEEEHHHH
T ss_pred ceEEEEECCCCCCHHHHHHHHHH-cCCEEEEccHH
Confidence 57899999999999999999998 89999998764
No 243
>2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A*
Probab=97.66 E-value=8.5e-05 Score=74.96 Aligned_cols=93 Identities=18% Similarity=0.195 Sum_probs=67.4
Q ss_pred ccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHc-CC---------------CeEEEEecCCCCC
Q psy4598 55 LFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSL-NV---------------PVQMFVATQYDRY 118 (369)
Q Consensus 55 ~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l-~i---------------~~~~~~~~~~~~~ 118 (369)
..|++++.|++|++.| +++++||.. .++. ..+++.+ |+ .|+++++. .
T Consensus 247 kdp~l~~~L~~Lr~~G-KlfLiTNS~---------~~yv---~~~m~yllg~~~~~~~~~~~~dWrdlFD~vI~~----A 309 (555)
T 2jc9_A 247 KDGKLPLLLSRMKEVG-KVFLATNSD---------YKYT---DKIMTYLFDFPHGPKPGSSHRPWQSYFDLILVD----A 309 (555)
T ss_dssp CCTHHHHHHHHHHHHS-EEEEECSSC---------HHHH---HHHHHHHTCSSSSSSTTSCCCCGGGGCSEEEES----C
T ss_pred CChHHHHHHHHHHHcC-CEEEEeCCC---------hHHH---HHHHHHhcCCCccccccccccchhhhCCEEEEe----C
Confidence 4578999999999999 999999932 3333 3333333 53 25765553 4
Q ss_pred CCCchhH----------------------------------HHHHHHHhcCCccccCCccEEeeCccccccccCCCCCCC
Q psy4598 119 RKPVPGM----------------------------------WEYLSQEKNGDLAIDISQSFYAGDAAGRAANWAPKKKKD 164 (369)
Q Consensus 119 rKP~~gm----------------------------------~~~~~~~~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d 164 (369)
+||..-- +..+.+.+ ++..++++||||..
T Consensus 310 ~KP~FF~~~~pfr~Vd~~tg~l~~~~~~~~l~~g~vY~gGn~~~~~~ll----g~~g~eVLYVGDhI------------- 372 (555)
T 2jc9_A 310 RKPLFFGEGTVLRQVDTKTGKLKIGTYTGPLQHGIVYSGGSSDTICDLL----GAKGKDILYIGDHI------------- 372 (555)
T ss_dssp CTTGGGTTCCCEEEEETTTTEECSSCCCSCCCTTCCEEECCHHHHHHHH----TCCGGGEEEEESCC-------------
T ss_pred CCCCcccCCCcceEeecCCCccccccccccccCCceeccCCHHHHHHHh----CCCCCeEEEECCEe-------------
Confidence 5665322 57777775 67889999999998
Q ss_pred CCcccHHHHH-hCCCCccCc
Q psy4598 165 FACTDHLFAF-NLNLAFFTP 183 (369)
Q Consensus 165 ~s~~D~~~A~-n~Gi~f~~p 183 (369)
.+||..|+ ..|++++..
T Consensus 373 --ftDIl~~kk~~GWrTiLV 390 (555)
T 2jc9_A 373 --FGDILKSKKRQGWRTFLV 390 (555)
T ss_dssp --CCCCHHHHHHHCCEEEEE
T ss_pred --hHhHHhHHhhcCeEEEEE
Confidence 39999997 999999543
No 244
>3eph_A TRNA isopentenyltransferase; transferase, alternative initiation, ATP-binding, cytoplasm, mitochondrion, nucleotide-binding, nucleus; 2.95A {Saccharomyces cerevisiae} PDB: 3epj_A 3epk_A* 3epl_A*
Probab=97.56 E-value=0.00011 Score=71.91 Aligned_cols=35 Identities=26% Similarity=0.513 Sum_probs=32.2
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhccCCcEEEeCCcc
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTL 306 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~~~~~~i~~D~~ 306 (369)
+.+|+++||+||||||++..|++.++..+|+.|.+
T Consensus 2 ~~~i~i~GptgsGKttla~~La~~~~~~iis~Ds~ 36 (409)
T 3eph_A 2 KKVIVIAGTTGVGKSQLSIQLAQKFNGEVINSDSM 36 (409)
T ss_dssp CEEEEEEECSSSSHHHHHHHHHHHHTEEEEECCTT
T ss_pred CcEEEEECcchhhHHHHHHHHHHHCCCeEeecCcc
Confidence 36899999999999999999999999999999873
No 245
>1s96_A Guanylate kinase, GMP kinase; E.coli, dimer, SAD, transferase; 2.00A {Escherichia coli} SCOP: c.37.1.1 PDB: 2an9_A* 2anb_A* 2anc_A 2f3r_A* 2f3t_A*
Probab=97.49 E-value=0.00082 Score=60.31 Aligned_cols=89 Identities=18% Similarity=0.259 Sum_probs=58.3
Q ss_pred EEEEEEcCCCCcHHHHHHHHhccCC-------cEEEeCCc-------c-------hhHHHH-------------------
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKPLN-------YTTVNRDT-------L-------GSWQKC------------------- 312 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~~~-------~~~i~~D~-------~-------~~~~~~------------------- 312 (369)
.+++|+||+||||||+.+.|..... ..+...+. + ..+...
T Consensus 17 ~ii~l~GpsGsGKSTLlk~L~g~~~p~~~~g~v~~ttr~~~~~e~~gi~y~fq~~~~f~~~~~~~~f~E~~~~~~~~yg~ 96 (219)
T 1s96_A 17 TLYIVSAPSGAGKSSLIQALLKTQPLYDTQVSVSHTTRQPRPGEVHGEHYFFVNHDEFKEMISRDAFLEHAEVFGNYYGT 96 (219)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHSCTTTEEECCCEECSCCCTTCCBTTTBEECCHHHHHHHHHTTCEEEEEEETTEEEEE
T ss_pred cEEEEECCCCCCHHHHHHHHhccCCCCceEEEEEecCCCCCcccccCceEEECCHHHHHHHHhcCHHHHHHHHHhccCCC
Confidence 6899999999999999999986543 11111110 0 001110
Q ss_pred -HHHHHHHHhCCCcEEEeCCCCCHHHHHHHHHHHHhcCCeEEEEEEeCCHHHHHHH
Q psy4598 313 -VSVMKAALDSGLSVVVDNTNPDKESRHRYIEAAKQHGVRCIAVHMNISKEHAKHN 367 (369)
Q Consensus 313 -~~~~~~~l~~g~~vIiD~tn~~~~~r~~~~~la~~~~~~v~~v~l~~~~e~~~~R 367 (369)
.+.+.++++.|..+|+| ++...+..+.++.. -.+.++....+.+++.+|
T Consensus 97 ~~~~v~~~l~~G~illLD---LD~~~~~~i~~~l~---~~~tI~i~th~~~~l~~R 146 (219)
T 1s96_A 97 SREAIEQVLATGVDVFLD---IDWQGAQQIRQKMP---HARSIFILPPSKIELDRR 146 (219)
T ss_dssp EHHHHHHHHTTTCEEEEE---CCHHHHHHHHHHCT---TCEEEEEECSSHHHHHHH
T ss_pred CHHHHHHHHhcCCeEEEE---ECHHHHHHHHHHcc---CCEEEEEECCCHHHHHHH
Confidence 23467788899999999 88888888887665 134455555566766654
No 246
>3ney_A 55 kDa erythrocyte membrane protein; structural genomics consortium, SGC, 55 kDa erythrocyte MEMB protein; 2.26A {Homo sapiens} SCOP: c.37.1.0
Probab=97.49 E-value=0.00019 Score=63.48 Aligned_cols=27 Identities=26% Similarity=0.432 Sum_probs=23.3
Q ss_pred ccEEEEEEcCCCCcHHHHHHHHhccCC
Q psy4598 271 LDSVLIMIGSQGSGKSSFVSTYLKPLN 297 (369)
Q Consensus 271 ~~~lIll~G~pGSGKSTla~~L~~~~~ 297 (369)
..++|+|+||+||||||+.+.|.+...
T Consensus 18 ~g~~ivl~GPSGaGKsTL~~~L~~~~~ 44 (197)
T 3ney_A 18 GRKTLVLIGASGVGRSHIKNALLSQNP 44 (197)
T ss_dssp SCCEEEEECCTTSSHHHHHHHHHHHCT
T ss_pred CCCEEEEECcCCCCHHHHHHHHHhhCC
Confidence 347999999999999999999987653
No 247
>2h92_A Cytidylate kinase; rossmann fold, transferase; HET: C5P PG4; 2.30A {Staphylococcus aureus}
Probab=97.49 E-value=3.5e-05 Score=68.43 Aligned_cols=35 Identities=17% Similarity=0.268 Sum_probs=32.4
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhccCCcEEEeCCcc
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTL 306 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~~~~~~i~~D~~ 306 (369)
+.+|.|+|+|||||||+++.|++.+++.+++.|.+
T Consensus 3 ~~~i~i~G~~gsGkst~~~~l~~~~g~~~~~~d~~ 37 (219)
T 2h92_A 3 AINIALDGPAAAGKSTIAKRVASELSMIYVDTGAM 37 (219)
T ss_dssp CCCEEEECCTTSSHHHHHHHHHHHTTCEEEEHHHH
T ss_pred ceEEEEECCCCCCHHHHHHHHHHhcCCceecCChH
Confidence 35799999999999999999999999999999886
No 248
>2ocp_A DGK, deoxyguanosine kinase; protein-nucleotide complex, transferase; HET: DTP; 2.80A {Homo sapiens} SCOP: c.37.1.1
Probab=97.48 E-value=0.00021 Score=64.67 Aligned_cols=29 Identities=28% Similarity=0.387 Sum_probs=25.3
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhccC-CcEE
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKPL-NYTT 300 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~~-~~~~ 300 (369)
+.+|++.|++||||||+++.|++.+ ++.+
T Consensus 2 ~~~i~~~G~~g~GKtt~~~~l~~~l~~~~~ 31 (241)
T 2ocp_A 2 PRRLSIEGNIAVGKSTFVKLLTKTYPEWHV 31 (241)
T ss_dssp CEEEEEEECTTSSHHHHHHHHHHHCTTSEE
T ss_pred CeEEEEEcCCCCCHHHHHHHHHHHcCCCee
Confidence 5789999999999999999999987 4443
No 249
>3asz_A Uridine kinase; cytidine phosphorylation, transferase; HET: C5P; 2.25A {Thermus thermophilus} PDB: 3asy_A*
Probab=97.47 E-value=5.8e-05 Score=66.60 Aligned_cols=37 Identities=19% Similarity=0.284 Sum_probs=31.6
Q ss_pred cccEEEEEEcCCCCcHHHHHHHHhccCC--cEEEeCCcc
Q psy4598 270 ALDSVLIMIGSQGSGKSSFVSTYLKPLN--YTTVNRDTL 306 (369)
Q Consensus 270 ~~~~lIll~G~pGSGKSTla~~L~~~~~--~~~i~~D~~ 306 (369)
..+.+|.|+|++||||||+++.|+..++ +.++++|.+
T Consensus 4 ~~~~~i~i~G~~GsGKSTl~~~l~~~~~~~i~~v~~d~~ 42 (211)
T 3asz_A 4 PKPFVIGIAGGTASGKTTLAQALARTLGERVALLPMDHY 42 (211)
T ss_dssp -CCEEEEEEESTTSSHHHHHHHHHHHHGGGEEEEEGGGC
T ss_pred CCcEEEEEECCCCCCHHHHHHHHHHHhCCCeEEEecCcc
Confidence 3457899999999999999999999877 888888764
No 250
>3tmk_A Thymidylate kinase; phosphotransferase; HET: T5A; 2.00A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 2tmk_A* 1tmk_A*
Probab=97.46 E-value=4.4e-05 Score=68.66 Aligned_cols=96 Identities=14% Similarity=0.213 Sum_probs=59.1
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhccCCc--EEEe-C--Cc-----chh----------------------HHHHHHHHHHH
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKPLNY--TTVN-R--DT-----LGS----------------------WQKCVSVMKAA 319 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~~~~--~~i~-~--D~-----~~~----------------------~~~~~~~~~~~ 319 (369)
..+|++.|++||||||+++.|++.++. ..+. . +. ++. ++ ..+.+..+
T Consensus 5 g~~i~~eG~~g~GKst~~~~l~~~l~~~~~~~~ep~~~t~~g~~ir~~l~~~~~~~~~~~~~llf~a~R~~-~~~~I~pa 83 (216)
T 3tmk_A 5 GKLILIEGLDRTGKTTQCNILYKKLQPNCKLLKFPERSTRIGGLINEYLTDDSFQLSDQAIHLLFSANRWE-IVDKIKKD 83 (216)
T ss_dssp CCEEEEEECSSSSHHHHHHHHHHHHCSSEEEEESSCTTSHHHHHHHHHHHCTTSCCCHHHHHHHHHHHHHT-THHHHHHH
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHhcccceEEEecCCCChHHHHHHHHHHhcccCCCHHHHHHHHHHHHHH-HHHHHHHH
Confidence 469999999999999999999998753 2222 1 11 110 11 12345567
Q ss_pred HhCCCcEEEeCCCCCHHH-----------HHHHHHHHHhcCCeEEEEEE-eCCHHHHHHHc
Q psy4598 320 LDSGLSVVVDNTNPDKES-----------RHRYIEAAKQHGVRCIAVHM-NISKEHAKHNI 368 (369)
Q Consensus 320 l~~g~~vIiD~tn~~~~~-----------r~~~~~la~~~~~~v~~v~l-~~~~e~~~~Rn 368 (369)
++.|..||.|-...+.-. ...+..++...-.|=..+++ ++|++++.+|.
T Consensus 84 L~~g~~VI~DRy~~S~~ayq~~~~l~~~~~~~l~~~~~~~~~PDlti~L~dv~pe~~~~R~ 144 (216)
T 3tmk_A 84 LLEGKNIVMDRYVYSGVAYSAAKGTNGMDLDWCLQPDVGLLKPDLTLFLSTQDVDNNAEKS 144 (216)
T ss_dssp HHTTCEEEEESCHHHHHHHHHTTCCTTCCHHHHHGGGTTSBCCSEEEEEECSCCSCGGGCC
T ss_pred HHcCCEEEEeccHhHHHHHHHhcCCCHHHHHHHHHHhhCCCCCCEEEEEeCCCHHHHHHHh
Confidence 789999999865322111 11122222111235578999 99999998874
No 251
>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A
Probab=97.44 E-value=0.00016 Score=65.77 Aligned_cols=41 Identities=17% Similarity=0.362 Sum_probs=33.7
Q ss_pred ceEEEEecCCceeecCCCCCCCCCccccccccccHHHHHHHHHHCCcEEEEEecC
Q psy4598 25 AKIASFDLDGTLITTKSGKVFPVDTHDWKLLFSNIESVLKQYLDDGYKLVIFTNQ 79 (369)
Q Consensus 25 ~k~~~fDlDgTLi~~~sg~~~~~~~~d~~~~~p~v~~~L~~L~~~G~~i~i~TNq 79 (369)
.|+++||+||||+ +. . ..+.+.++|++|+++|++++|+|+.
T Consensus 2 ikli~~DlDGTLl-~~--~-----------~~~~~~~~l~~l~~~g~~~~i~Tgr 42 (249)
T 2zos_A 2 IRLIFLDIDKTLI-PG--Y-----------EPDPAKPIIEELKDMGFEIIFNSSK 42 (249)
T ss_dssp EEEEEECCSTTTC-TT--S-----------CSGGGHHHHHHHHHTTEEEEEBCSS
T ss_pred ccEEEEeCCCCcc-CC--C-----------CcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4899999999999 32 1 1244889999999999999999984
No 252
>1g8f_A Sulfate adenylyltransferase; alpha-beta protein, beta-barrel, rossmann-fold, kinase fold; 1.95A {Saccharomyces cerevisiae} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1g8g_A* 1g8h_A* 1j70_A 1jec_A 1jed_A* 1jee_A*
Probab=97.42 E-value=0.00011 Score=74.25 Aligned_cols=59 Identities=8% Similarity=0.161 Sum_probs=45.3
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhccCCc-------EEEeCCcchhHHHHHHHHHHHHhCCCcEEEeCCCC
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKPLNY-------TTVNRDTLGSWQKCVSVMKAALDSGLSVVVDNTNP 333 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~~~~-------~~i~~D~~~~~~~~~~~~~~~l~~g~~vIiD~tn~ 333 (369)
..+|+|+|+|||||||+|++|++.++. .+++.|.- ..+...+...++.|..||+...+.
T Consensus 395 ~~~I~l~GlsGsGKSTIa~~La~~L~~~~g~r~~~~lDgD~~---~ei~~va~~~~~~G~~Vv~~~~sp 460 (511)
T 1g8f_A 395 GFSIVLGNSLTVSREQLSIALLSTFLQFGGGRYYKIFEHNNK---TELLSLIQDFIGSGSGLIIPDQWE 460 (511)
T ss_dssp CEEEEECTTCCSCHHHHHHHHHHHHTTSCSCCCEEECCCTTC---HHHHTTHHHHHHTTCEEEESSCCC
T ss_pred ceEEEecccCCCCHHHHHHHHHHHHHHhhcCcceEEecCCCc---HHHHHHHHHHHhcCCeEEEecCCH
Confidence 478999999999999999999999874 78999981 123334555667887777776654
No 253
>3lnc_A Guanylate kinase, GMP kinase; ALS collaborative crystallography, emerald biostructures, ATP-binding, cytoplasm, nucleotide-binding; HET: 5GP; 1.95A {Anaplasma phagocytophilum}
Probab=97.41 E-value=0.00021 Score=64.14 Aligned_cols=25 Identities=24% Similarity=0.493 Sum_probs=16.6
Q ss_pred cEEEEEEcCCCCcHHHHHHHHh-ccC
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYL-KPL 296 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~-~~~ 296 (369)
..+|.|+|++||||||+++.|+ ...
T Consensus 27 G~ii~l~Gp~GsGKSTl~~~L~~~~~ 52 (231)
T 3lnc_A 27 GVILVLSSPSGCGKTTVANKLLEKQK 52 (231)
T ss_dssp CCEEEEECSCC----CHHHHHHC---
T ss_pred CCEEEEECCCCCCHHHHHHHHHhcCC
Confidence 4689999999999999999999 543
No 254
>3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe}
Probab=97.40 E-value=0.00015 Score=70.45 Aligned_cols=108 Identities=17% Similarity=0.158 Sum_probs=66.8
Q ss_pred CCCceEEEEecCCceeecCCCC----------C----CCCCccc--------------cccccccHHHHHHHHHHCCcEE
Q psy4598 22 CNSAKIASFDLDGTLITTKSGK----------V----FPVDTHD--------------WKLLFSNIESVLKQYLDDGYKL 73 (369)
Q Consensus 22 ~~~~k~~~fDlDgTLi~~~sg~----------~----~~~~~~d--------------~~~~~p~v~~~L~~L~~~G~~i 73 (369)
..+.+.++|||||||+.+.... . +..+..+ +..+-||+.+.|+++. ++|.|
T Consensus 15 ~~~k~~LVlDLD~TLvhS~~~~~~~~w~~~~~~~~~~~~~dv~~f~~~~~~~~~~~~~~v~~RPg~~eFL~~l~-~~yei 93 (372)
T 3ef0_A 15 QEKRLSLIVDLDQTIIHATVDPTVGEWMSDPGNVNYDVLRDVRSFNLQEGPSGYTSCYYIKFRPGLAQFLQKIS-ELYEL 93 (372)
T ss_dssp HHTCEEEEECCBTTTEEEECCTHHHHHHTCTTSTTTGGGTTCEEEEEEETTTTEEEEEEEEECTTHHHHHHHHH-TTEEE
T ss_pred hCCCCEEEEcCCCCcccccCcCccchhhccCCCCchhhhhhhhceeeeeccCCceEEEEEEECcCHHHHHHHHh-cCcEE
Confidence 3567899999999999983210 0 0011111 1234699999999998 88999
Q ss_pred EEEecCCCcCCCCCCHHHHHHHHHHHHHHcCC---CeE-EEEecCCCCCCCCchhHHHHHHHHhcCCccccCCccEEeeC
Q psy4598 74 VIFTNQGAIGRKKMSTRDFQAKAEKIIKSLNV---PVQ-MFVATQYDRYRKPVPGMWEYLSQEKNGDLAIDISQSFYAGD 149 (369)
Q Consensus 74 ~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l~i---~~~-~~~~~~~~~~rKP~~gm~~~~~~~~~~~~~i~~~~s~~VGD 149 (369)
+|+|+.. ......+++.++. .|. .+++.+.+. .++..-++.+ ++.+++++++|-|
T Consensus 94 vI~Tas~------------~~yA~~vl~~LDp~~~~f~~ri~sr~~~g------~~~~KdL~~L---~~~dl~~viiiDd 152 (372)
T 3ef0_A 94 HIYTMGT------------KAYAKEVAKIIDPTGKLFQDRVLSRDDSG------SLAQKSLRRL---FPCDTSMVVVIDD 152 (372)
T ss_dssp EEECSSC------------HHHHHHHHHHHCTTSCSSSSCEECTTTSS------CSSCCCGGGT---CSSCCTTEEEEES
T ss_pred EEEeCCc------------HHHHHHHHHHhccCCceeeeEEEEecCCC------CcceecHHHh---cCCCCceEEEEeC
Confidence 9999943 2345556666654 354 344443332 1222222221 2578999999999
Q ss_pred cc
Q psy4598 150 AA 151 (369)
Q Consensus 150 ~~ 151 (369)
+.
T Consensus 153 ~~ 154 (372)
T 3ef0_A 153 RG 154 (372)
T ss_dssp CS
T ss_pred CH
Confidence 97
No 255
>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10
Probab=97.36 E-value=0.00025 Score=65.51 Aligned_cols=57 Identities=18% Similarity=0.279 Sum_probs=42.7
Q ss_pred ceEEEEecCCceeecCCCCCCCCCccccccccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHcC
Q psy4598 25 AKIASFDLDGTLITTKSGKVFPVDTHDWKLLFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSLN 104 (369)
Q Consensus 25 ~k~~~fDlDgTLi~~~sg~~~~~~~~d~~~~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l~ 104 (369)
.|+++||+||||+.... ...+...++|++|+++|++++|+|..+ .. .+..+++.++
T Consensus 9 ~~li~~DlDGTLl~~~~------------~~~~~~~~~l~~l~~~G~~~~iaTGR~--------~~----~~~~~~~~l~ 64 (275)
T 1xvi_A 9 PLLVFSDLDGTLLDSHS------------YDWQPAAPWLTRLREANVPVILCSSKT--------SA----EMLYLQKTLG 64 (275)
T ss_dssp CEEEEEECTTTTSCSSC------------CSCCTTHHHHHHHHHTTCCEEEECSSC--------HH----HHHHHHHHTT
T ss_pred ceEEEEeCCCCCCCCCC------------cCCHHHHHHHHHHHHCCCeEEEEcCCC--------HH----HHHHHHHHcC
Confidence 58999999999986421 134667899999999999999999742 22 3445567777
Q ss_pred C
Q psy4598 105 V 105 (369)
Q Consensus 105 i 105 (369)
+
T Consensus 65 ~ 65 (275)
T 1xvi_A 65 L 65 (275)
T ss_dssp C
T ss_pred C
Confidence 6
No 256
>3syl_A Protein CBBX; photosynthesis, rubisco activase, AAA+ protein, calvin cycle chaperone; 3.00A {Rhodobacter sphaeroides} PDB: 3syk_A 3zuh_A*
Probab=97.33 E-value=0.00094 Score=62.18 Aligned_cols=87 Identities=18% Similarity=0.243 Sum_probs=53.2
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhccC---------CcEEEeCCcch-----hH-HHHHHHHHHHHhCCCcEEEeCCC----
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKPL---------NYTTVNRDTLG-----SW-QKCVSVMKAALDSGLSVVVDNTN---- 332 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~~---------~~~~i~~D~~~-----~~-~~~~~~~~~~l~~g~~vIiD~tn---- 332 (369)
..-++|.|+||+|||++|+.+++.+ .+..++...+. .. .........+ .+..++||...
T Consensus 67 ~~~vll~G~~GtGKT~la~~la~~l~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~--~~~vl~iDEid~l~~ 144 (309)
T 3syl_A 67 TLHMSFTGNPGTGKTTVALKMAGLLHRLGYVRKGHLVSVTRDDLVGQYIGHTAPKTKEVLKRA--MGGVLFIDEAYYLYR 144 (309)
T ss_dssp CCEEEEEECTTSSHHHHHHHHHHHHHHTTSSSSCCEEEECGGGTCCSSTTCHHHHHHHHHHHH--TTSEEEEETGGGSCC
T ss_pred CceEEEECCCCCCHHHHHHHHHHHHHhcCCcCCCcEEEEcHHHhhhhcccccHHHHHHHHHhc--CCCEEEEEChhhhcc
Confidence 3568999999999999999888764 45566655541 11 1122222222 35577788653
Q ss_pred ------CCHHHHHHHHHHHHhcCCeEEEEEEeCC
Q psy4598 333 ------PDKESRHRYIEAAKQHGVRCIAVHMNIS 360 (369)
Q Consensus 333 ------~~~~~r~~~~~la~~~~~~v~~v~l~~~ 360 (369)
........+..........+.++....+
T Consensus 145 ~~~~~~~~~~~~~~Ll~~l~~~~~~~~~i~~~~~ 178 (309)
T 3syl_A 145 PDNERDYGQEAIEILLQVMENNRDDLVVILAGYA 178 (309)
T ss_dssp CC---CCTHHHHHHHHHHHHHCTTTCEEEEEECH
T ss_pred CCCcccccHHHHHHHHHHHhcCCCCEEEEEeCCh
Confidence 2455566777777766555555555433
No 257
>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10
Probab=97.33 E-value=0.00041 Score=64.27 Aligned_cols=42 Identities=36% Similarity=0.512 Sum_probs=36.0
Q ss_pred ceEEEEecCCceeecCCCCCCCCCccccccccccHHHHHHHHHHCCcEEEEEec
Q psy4598 25 AKIASFDLDGTLITTKSGKVFPVDTHDWKLLFSNIESVLKQYLDDGYKLVIFTN 78 (369)
Q Consensus 25 ~k~~~fDlDgTLi~~~sg~~~~~~~~d~~~~~p~v~~~L~~L~~~G~~i~i~TN 78 (369)
.|+++|||||||+.+.. .+.+...++|++|+++|+.++++|.
T Consensus 4 ikli~~DlDGTLl~~~~------------~i~~~~~~al~~l~~~G~~~~iaTG 45 (288)
T 1nrw_A 4 MKLIAIDLDGTLLNSKH------------QVSLENENALRQAQRDGIEVVVSTG 45 (288)
T ss_dssp CCEEEEECCCCCSCTTS------------CCCHHHHHHHHHHHHTTCEEEEECS
T ss_pred eEEEEEeCCCCCCCCCC------------ccCHHHHHHHHHHHHCCCEEEEEeC
Confidence 58999999999997542 1567889999999999999999996
No 258
>2chg_A Replication factor C small subunit; DNA-binding protein, DNA replication, clamp loader, AAA+ ATPase, ATP-binding, nucleotide-binding; HET: ANP; 2.1A {Archaeoglobus fulgidus}
Probab=97.30 E-value=0.0013 Score=57.03 Aligned_cols=84 Identities=13% Similarity=0.184 Sum_probs=50.9
Q ss_pred EEEEEcCCCCcHHHHHHHHhccC-------CcEEEeCCcchhHHHHHHHHHHHHh-------CCCcEEEeCCC-CCHHHH
Q psy4598 274 VLIMIGSQGSGKSSFVSTYLKPL-------NYTTVNRDTLGSWQKCVSVMKAALD-------SGLSVVVDNTN-PDKESR 338 (369)
Q Consensus 274 lIll~G~pGSGKSTla~~L~~~~-------~~~~i~~D~~~~~~~~~~~~~~~l~-------~g~~vIiD~tn-~~~~~r 338 (369)
.+++.|+||+|||++++.+++.+ .+..++................... ....+|+|... ......
T Consensus 40 ~~ll~G~~G~GKT~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vliiDe~~~l~~~~~ 119 (226)
T 2chg_A 40 HLLFSGPPGTGKTATAIALARDLFGENWRDNFIEMNASDERGIDVVRHKIKEFARTAPIGGAPFKIIFLDEADALTADAQ 119 (226)
T ss_dssp CEEEECSTTSSHHHHHHHHHHHHHGGGGGGGEEEEETTCTTCHHHHHHHHHHHHTSCCSTTCSCEEEEEETGGGSCHHHH
T ss_pred eEEEECCCCCCHHHHHHHHHHHHhccccccceEEeccccccChHHHHHHHHHHhcccCCCccCceEEEEeChhhcCHHHH
Confidence 38999999999999999998753 2455555444333333333333332 23357788754 355566
Q ss_pred HHHHHHHHhcCCeEEEEEE
Q psy4598 339 HRYIEAAKQHGVRCIAVHM 357 (369)
Q Consensus 339 ~~~~~la~~~~~~v~~v~l 357 (369)
..+..+.......+.++..
T Consensus 120 ~~l~~~l~~~~~~~~~i~~ 138 (226)
T 2chg_A 120 AALRRTMEMYSKSCRFILS 138 (226)
T ss_dssp HHHHHHHHHTTTTEEEEEE
T ss_pred HHHHHHHHhcCCCCeEEEE
Confidence 6677766665444544444
No 259
>3ec2_A DNA replication protein DNAC; helicase loader, replication initiation factor, ATP-binding, nucleotide-binding; HET: DNA ADP; 2.70A {Aquifex aeolicus} PDB: 3ecc_A*
Probab=97.29 E-value=0.0012 Score=56.47 Aligned_cols=74 Identities=16% Similarity=0.160 Sum_probs=46.8
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhccC------CcEEEeCCcch-hHHHHH-----HHHHHHHhCCCcEEEeCCC---CCHH
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKPL------NYTTVNRDTLG-SWQKCV-----SVMKAALDSGLSVVVDNTN---PDKE 336 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~~------~~~~i~~D~~~-~~~~~~-----~~~~~~l~~g~~vIiD~tn---~~~~ 336 (369)
...++|.|+|||||||+++.++... .+.+++...+. .+.... ..+.+.+.....+|+|... .+.+
T Consensus 38 g~~~~l~G~~G~GKTtL~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llilDE~~~~~~~~~ 117 (180)
T 3ec2_A 38 GKGLTFVGSPGVGKTHLAVATLKAIYEKKGIRGYFFDTKDLIFRLKHLMDEGKDTKFLKTVLNSPVLVLDDLGSERLSDW 117 (180)
T ss_dssp CCEEEECCSSSSSHHHHHHHHHHHHHHHSCCCCCEEEHHHHHHHHHHHHHHTCCSHHHHHHHTCSEEEEETCSSSCCCHH
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHHHcCCeEEEEEHHHHHHHHHHHhcCchHHHHHHHhcCCCEEEEeCCCCCcCCHH
Confidence 5688999999999999999997653 34555554432 111111 1223344556678899764 5677
Q ss_pred HHHHHHHHH
Q psy4598 337 SRHRYIEAA 345 (369)
Q Consensus 337 ~r~~~~~la 345 (369)
.+..+.++.
T Consensus 118 ~~~~l~~ll 126 (180)
T 3ec2_A 118 QRELISYII 126 (180)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 777665544
No 260
>1a7j_A Phosphoribulokinase; transferase, calvin cycle; 2.50A {Rhodobacter sphaeroides} SCOP: c.37.1.6
Probab=97.29 E-value=5.3e-05 Score=71.10 Aligned_cols=36 Identities=19% Similarity=0.410 Sum_probs=29.1
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhccCC-----cEEEeCCcch
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKPLN-----YTTVNRDTLG 307 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~~~-----~~~i~~D~~~ 307 (369)
+.+|.++|++||||||+++.|++.++ +.+|+.|.+.
T Consensus 5 ~~iIgItG~sGSGKSTva~~L~~~lg~~~~~~~vI~~D~~~ 45 (290)
T 1a7j_A 5 HPIISVTGSSGAGTSTVKHTFDQIFRREGVKAVSIEGDAFH 45 (290)
T ss_dssp SCEEEEESCC---CCTHHHHHHHHHHHHTCCEEEEEGGGGB
T ss_pred ceEEEEECCCCCCHHHHHHHHHHHHhhcCCCeeEeecchhh
Confidence 46899999999999999999999765 7899999875
No 261
>2vp4_A Deoxynucleoside kinase; ATP-binding, DNA synthesis, phosphoprotein, feedback inhibition, deoxyribonucleoside kinase, salvage pathway; HET: DCP; 2.20A {Drosophila melanogaster} SCOP: c.37.1.1 PDB: 1j90_A* 2jj8_A* 2vp2_A* 1oe0_A* 2vp5_A* 2vp6_A* 2vp9_A* 2vpp_A* 2vqs_A* 2vp0_A* 1ot3_A* 2jcs_A* 1zm7_A* 1zmx_A*
Probab=97.24 E-value=0.00071 Score=60.79 Aligned_cols=32 Identities=22% Similarity=0.345 Sum_probs=26.0
Q ss_pred ccEEEEEEcCCCCcHHHHHHHHhccCCcEEEe
Q psy4598 271 LDSVLIMIGSQGSGKSSFVSTYLKPLNYTTVN 302 (369)
Q Consensus 271 ~~~lIll~G~pGSGKSTla~~L~~~~~~~~i~ 302 (369)
...+|.+.|++||||||+++.|+...+-+.+.
T Consensus 19 ~g~~i~i~G~~GsGKSTl~~~L~~~~g~v~~~ 50 (230)
T 2vp4_A 19 QPFTVLIEGNIGSGKTTYLNHFEKYKNDICLL 50 (230)
T ss_dssp CCEEEEEECSTTSCHHHHHHTTGGGTTTEEEE
T ss_pred CceEEEEECCCCCCHHHHHHHHHhccCCeEEE
Confidence 34799999999999999999999875434444
No 262
>3kl4_A SRP54, signal recognition 54 kDa protein; signal recognition particle, SRP, SRP54, FFH, signal sequenc peptide; 3.50A {Sulfolobus solfataricus} PDB: 1qzx_A 1qzw_A
Probab=97.21 E-value=0.0012 Score=65.23 Aligned_cols=37 Identities=24% Similarity=0.357 Sum_probs=30.2
Q ss_pred ccEEEEEEcCCCCcHHHHHHHHhccC-----CcEEEeCCcch
Q psy4598 271 LDSVLIMIGSQGSGKSSFVSTYLKPL-----NYTTVNRDTLG 307 (369)
Q Consensus 271 ~~~lIll~G~pGSGKSTla~~L~~~~-----~~~~i~~D~~~ 307 (369)
.+.+|+++|++||||||++..|+..+ .+.+++.|.++
T Consensus 96 ~~~vI~lvG~~GsGKTTt~~kLA~~l~~~G~kVllv~~D~~r 137 (433)
T 3kl4_A 96 LPFIIMLVGVQGSGKTTTAGKLAYFYKKRGYKVGLVAADVYR 137 (433)
T ss_dssp SSEEEEECCCTTSCHHHHHHHHHHHHHHTTCCEEEEEECCSC
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEecCccc
Confidence 35789999999999999999998643 56678888764
No 263
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=97.20 E-value=0.0016 Score=64.48 Aligned_cols=37 Identities=32% Similarity=0.464 Sum_probs=30.6
Q ss_pred ccEEEEEEcCCCCcHHHHHHHHhcc-----CCcEEEeCCcch
Q psy4598 271 LDSVLIMIGSQGSGKSSFVSTYLKP-----LNYTTVNRDTLG 307 (369)
Q Consensus 271 ~~~lIll~G~pGSGKSTla~~L~~~-----~~~~~i~~D~~~ 307 (369)
.|.+|+++|+|||||||++..|+.. ..+.+++.|.++
T Consensus 99 ~p~vIlivG~~G~GKTTt~~kLA~~l~~~G~kVllv~~D~~R 140 (443)
T 3dm5_A 99 KPTILLMVGIQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWR 140 (443)
T ss_dssp SSEEEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEEECCCSS
T ss_pred CCeEEEEECcCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCcc
Confidence 3678999999999999999999864 356788888874
No 264
>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A*
Probab=97.19 E-value=0.00028 Score=64.30 Aligned_cols=43 Identities=19% Similarity=0.311 Sum_probs=36.9
Q ss_pred ceEEEEecCCceeecCCCCCCCCCccccccccccHHHHHHHHHHCCcEEEEEecC
Q psy4598 25 AKIASFDLDGTLITTKSGKVFPVDTHDWKLLFSNIESVLKQYLDDGYKLVIFTNQ 79 (369)
Q Consensus 25 ~k~~~fDlDgTLi~~~sg~~~~~~~~d~~~~~p~v~~~L~~L~~~G~~i~i~TNq 79 (369)
.|+++||+||||+.+.. .+.|...++|++|+++|++++|+|-.
T Consensus 4 ~kli~~DlDGTLl~~~~------------~i~~~~~~~l~~l~~~g~~~~iaTGR 46 (246)
T 3f9r_A 4 RVLLLFDVDGTLTPPRL------------CQTDEMRALIKRARGAGFCVGTVGGS 46 (246)
T ss_dssp SEEEEECSBTTTBSTTS------------CCCHHHHHHHHHHHHTTCEEEEECSS
T ss_pred ceEEEEeCcCCcCCCCC------------ccCHHHHHHHHHHHHCCCEEEEECCC
Confidence 68999999999986542 25688999999999999999999973
No 265
>1njg_A DNA polymerase III subunit gamma; rossman-like fold, AAA+ ATPase domains, sensor 1, sensor 2, transferase; HET: DNA; 2.20A {Escherichia coli} SCOP: c.37.1.20 PDB: 1njf_A*
Probab=97.11 E-value=0.0013 Score=57.69 Aligned_cols=25 Identities=28% Similarity=0.476 Sum_probs=21.9
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhccC
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKPL 296 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~~ 296 (369)
+..+++.|+||+||||+++.+++..
T Consensus 45 ~~~~ll~G~~G~GKT~l~~~~~~~~ 69 (250)
T 1njg_A 45 HHAYLFSGTRGVGKTSIARLLAKGL 69 (250)
T ss_dssp CSEEEEECSTTSCHHHHHHHHHHHH
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHh
Confidence 3588999999999999999998754
No 266
>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10
Probab=97.10 E-value=0.00076 Score=61.79 Aligned_cols=42 Identities=21% Similarity=0.331 Sum_probs=35.1
Q ss_pred ceEEEEecCCceeecCCCCCCCCCccccccccccHHHHHHHHHHCCcEEEEEecC
Q psy4598 25 AKIASFDLDGTLITTKSGKVFPVDTHDWKLLFSNIESVLKQYLDDGYKLVIFTNQ 79 (369)
Q Consensus 25 ~k~~~fDlDgTLi~~~sg~~~~~~~~d~~~~~p~v~~~L~~L~~~G~~i~i~TNq 79 (369)
.|+++||+||||+.+.. .+.|...++|++ +++|++++|+|-.
T Consensus 2 ikli~~DlDGTLl~~~~------------~i~~~~~~al~~-~~~Gi~v~iaTGR 43 (268)
T 1nf2_A 2 YRVFVFDLDGTLLNDNL------------EISEKDRRNIEK-LSRKCYVVFASGR 43 (268)
T ss_dssp BCEEEEECCCCCSCTTS------------CCCHHHHHHHHH-HTTTSEEEEECSS
T ss_pred ccEEEEeCCCcCCCCCC------------ccCHHHHHHHHH-HhCCCEEEEECCC
Confidence 48999999999996532 146778999999 9999999999973
No 267
>3ch4_B Pmkase, phosphomevalonate kinase; parallel beta-sheet with the strand order 23145, walker A motif, cholesterol biosynthesis, lipid synthesis; 1.76A {Homo sapiens}
Probab=97.10 E-value=0.0025 Score=56.43 Aligned_cols=93 Identities=16% Similarity=0.182 Sum_probs=57.5
Q ss_pred ccEEEEEEcCCCCcHHHHHHHHhccC---CcEEEeC-Ccchh----------------------HHHHH----HH-----
Q psy4598 271 LDSVLIMIGSQGSGKSSFVSTYLKPL---NYTTVNR-DTLGS----------------------WQKCV----SV----- 315 (369)
Q Consensus 271 ~~~lIll~G~pGSGKSTla~~L~~~~---~~~~i~~-D~~~~----------------------~~~~~----~~----- 315 (369)
++.+|+++|.|||||+|+|+.+.+.+ ++..++. |.++. |+... +.
T Consensus 10 ~~~II~itGk~~SGKd~va~~l~~~~g~~~~~vv~msD~iK~~~a~~~gl~~~~~l~~~~ykE~~R~~m~~~g~~~R~~d 89 (202)
T 3ch4_B 10 PRLVLLFSGKRKSGKDFVTEALQSRLGADVCAVLRLSGPLKEQYAQEHGLNFQRLLDTSTYKEAFRKDMIRWGEEKRQAD 89 (202)
T ss_dssp CSEEEEEEECTTSSHHHHHHHHHHHHCTTTEEEECTHHHHHHHHHHTTTCCCC-------CCSSHHHHHHHHHHHHHHHC
T ss_pred CCEEEEEECCCCCChHHHHHHHHHHcCCCCceEEEccHHHHHHHHHHcCCCchhhcchhhhHHHHHHHHHHHHHHHHhcC
Confidence 45799999999999999999998865 3555653 43331 11111 11
Q ss_pred ----HHHHHhC--CCcEEEeCCCCCHHHHHHHHHHHHhcCCeEEEEEEeCCHHHHHHH
Q psy4598 316 ----MKAALDS--GLSVVVDNTNPDKESRHRYIEAAKQHGVRCIAVHMNISKEHAKHN 367 (369)
Q Consensus 316 ----~~~~l~~--g~~vIiD~tn~~~~~r~~~~~la~~~~~~v~~v~l~~~~e~~~~R 367 (369)
++.++.. ...||||+.= ...+.+.+.+. .+..+.+|.+.+|+++-.+|
T Consensus 90 ~~~~~~~~~~~~~~~~vII~dvR-~~~Ev~~fr~~---~g~~~~iirI~as~~~R~~R 143 (202)
T 3ch4_B 90 PGFFCRKIVEGISQPIWLVSDTR-RVSDIQWFREA---YGAVTQTVRVVALEQSRQQR 143 (202)
T ss_dssp TTTTHHHHSBTCCCSEEEECCCC-SHHHHHHHHHH---HGGGEEEEEEEECHHHHHHT
T ss_pred chHHHHHHHHhcCCCcEEEeCCC-CHHHHHHHHHh---CCCcEEEEEEECCHHHHHHH
Confidence 1222211 2257777764 44444444432 34458899999999988777
No 268
>3t15_A Ribulose bisphosphate carboxylase/oxygenase activ chloroplastic; photosynthesis, rubisco activase, AAA+ protein; 2.95A {Nicotiana tabacum} PDB: 3zw6_A
Probab=97.09 E-value=0.0003 Score=65.87 Aligned_cols=37 Identities=16% Similarity=0.233 Sum_probs=28.8
Q ss_pred ccccEEEEEEcCCCCcHHHHHHHHhccCC--cEEEeCCc
Q psy4598 269 AALDSVLIMIGSQGSGKSSFVSTYLKPLN--YTTVNRDT 305 (369)
Q Consensus 269 ~~~~~lIll~G~pGSGKSTla~~L~~~~~--~~~i~~D~ 305 (369)
...|..++|.||||+|||++|+++++.++ ...++...
T Consensus 33 ~~~p~~lLl~GppGtGKT~la~aiA~~l~~~~i~v~~~~ 71 (293)
T 3t15_A 33 IKVPLILGIWGGKGQGKSFQCELVFRKMGINPIMMSAGE 71 (293)
T ss_dssp CCCCSEEEEEECTTSCHHHHHHHHHHHHTCCCEEEEHHH
T ss_pred CCCCeEEEEECCCCCCHHHHHHHHHHHhCCCEEEEeHHH
Confidence 34467889999999999999999999875 45555433
No 269
>3co5_A Putative two-component system transcriptional RES regulator; structural genomics, APC89341.1; 2.40A {Neisseria gonorrhoeae}
Probab=97.08 E-value=0.0015 Score=54.20 Aligned_cols=71 Identities=10% Similarity=0.041 Sum_probs=42.1
Q ss_pred EEEEEcCCCCcHHHHHHHHhccCC-cEEEeCCcchhHHHHHHHHHHHHhCCCcEEEeCCC-CCHHHHHHHHHHHHh
Q psy4598 274 VLIMIGSQGSGKSSFVSTYLKPLN-YTTVNRDTLGSWQKCVSVMKAALDSGLSVVVDNTN-PDKESRHRYIEAAKQ 347 (369)
Q Consensus 274 lIll~G~pGSGKSTla~~L~~~~~-~~~i~~D~~~~~~~~~~~~~~~l~~g~~vIiD~tn-~~~~~r~~~~~la~~ 347 (369)
-|+|.|+||+|||++|+.+..... +..++...+.. .......+. ..+..+++|... ........+.....+
T Consensus 29 ~vll~G~~GtGKt~lA~~i~~~~~~~~~~~~~~~~~--~~~~~~~~~-a~~~~l~lDei~~l~~~~q~~Ll~~l~~ 101 (143)
T 3co5_A 29 PVFLTGEAGSPFETVARYFHKNGTPWVSPARVEYLI--DMPMELLQK-AEGGVLYVGDIAQYSRNIQTGITFIIGK 101 (143)
T ss_dssp CEEEEEETTCCHHHHHGGGCCTTSCEECCSSTTHHH--HCHHHHHHH-TTTSEEEEEECTTCCHHHHHHHHHHHHH
T ss_pred cEEEECCCCccHHHHHHHHHHhCCCeEEechhhCCh--HhhhhHHHh-CCCCeEEEeChHHCCHHHHHHHHHHHHh
Confidence 378999999999999999998765 33444433321 111111222 234567788654 355555555555443
No 270
>2qmh_A HPR kinase/phosphorylase; V267F mutation, ATP-binding, carbohydrate metabolism, magnesium, metal-binding, multifunctional enzyme; 2.60A {Lactobacillus casei} PDB: 1jb1_A 1kkl_A 1kkm_A*
Probab=97.07 E-value=0.00044 Score=61.25 Aligned_cols=34 Identities=18% Similarity=0.281 Sum_probs=30.1
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhccCCcEEEeCCcc
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTL 306 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~~~~~~i~~D~~ 306 (369)
...|+++|++||||||+|.+|+++.+ .+|+.|..
T Consensus 34 g~~ilI~GpsGsGKStLA~~La~~g~-~iIsdDs~ 67 (205)
T 2qmh_A 34 GLGVLITGDSGVGKSETALELVQRGH-RLIADDRV 67 (205)
T ss_dssp TEEEEEECCCTTTTHHHHHHHHTTTC-EEEESSEE
T ss_pred CEEEEEECCCCCCHHHHHHHHHHhCC-eEEecchh
Confidence 36799999999999999999999877 88888875
No 271
>2cvh_A DNA repair and recombination protein RADB; filament formation, homologous recombination, ATPase domain, hyperthermophIle; HET: DNA; 2.20A {Thermococcus kodakarensis} PDB: 2cvf_A*
Probab=97.06 E-value=0.0026 Score=55.85 Aligned_cols=34 Identities=15% Similarity=0.120 Sum_probs=27.2
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhcc--CCcEEEeCCc
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKP--LNYTTVNRDT 305 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~--~~~~~i~~D~ 305 (369)
..++++.|+|||||||++..++.. .++.+++.+.
T Consensus 20 G~~~~i~G~~GsGKTtl~~~l~~~~~~~v~~i~~~~ 55 (220)
T 2cvh_A 20 GVLTQVYGPYASGKTTLALQTGLLSGKKVAYVDTEG 55 (220)
T ss_dssp TSEEEEECSTTSSHHHHHHHHHHHHCSEEEEEESSC
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHcCCcEEEEECCC
Confidence 368999999999999999999752 2466777654
No 272
>4b4t_M 26S protease regulatory subunit 6A; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.05 E-value=0.00056 Score=67.67 Aligned_cols=35 Identities=20% Similarity=0.241 Sum_probs=29.3
Q ss_pred cccccEEEEEEcCCCCcHHHHHHHHhccCCcEEEe
Q psy4598 268 KAALDSVLIMIGSQGSGKSSFVSTYLKPLNYTTVN 302 (369)
Q Consensus 268 ~~~~~~lIll~G~pGSGKSTla~~L~~~~~~~~i~ 302 (369)
.-+.|+=|+|.||||+|||++|++++...++.++.
T Consensus 211 g~~~prGvLLyGPPGTGKTllAkAiA~e~~~~f~~ 245 (434)
T 4b4t_M 211 GIRAPKGALMYGPPGTGKTLLARACAAQTNATFLK 245 (434)
T ss_dssp CCCCCCEEEEESCTTSSHHHHHHHHHHHHTCEEEE
T ss_pred CCCCCCeeEEECcCCCCHHHHHHHHHHHhCCCEEE
Confidence 34557889999999999999999999998765554
No 273
>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10
Probab=97.05 E-value=0.00043 Score=63.99 Aligned_cols=43 Identities=21% Similarity=0.400 Sum_probs=36.7
Q ss_pred ceEEEEecCCceeecCCCCCCCCCccccccccccHHHHHHHHHHCCcEEEEEecC
Q psy4598 25 AKIASFDLDGTLITTKSGKVFPVDTHDWKLLFSNIESVLKQYLDDGYKLVIFTNQ 79 (369)
Q Consensus 25 ~k~~~fDlDgTLi~~~sg~~~~~~~~d~~~~~p~v~~~L~~L~~~G~~i~i~TNq 79 (369)
.|+++||+||||+.+.. .+.|...++|++|+++|++++|+|..
T Consensus 5 ~kli~~DlDGTLl~~~~------------~i~~~~~~aL~~l~~~Gi~vviaTGR 47 (282)
T 1rkq_A 5 IKLIAIDMDGTLLLPDH------------TISPAVKNAIAAARARGVNVVLTTGR 47 (282)
T ss_dssp CCEEEECCCCCCSCTTS------------CCCHHHHHHHHHHHHTTCEEEEECSS
T ss_pred ceEEEEeCCCCCCCCCC------------cCCHHHHHHHHHHHHCCCEEEEEcCC
Confidence 58999999999996531 25688999999999999999999963
No 274
>4b4t_K 26S protease regulatory subunit 6B homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.03 E-value=0.00077 Score=66.62 Aligned_cols=36 Identities=14% Similarity=0.232 Sum_probs=29.6
Q ss_pred cccccEEEEEEcCCCCcHHHHHHHHhccCCcEEEeC
Q psy4598 268 KAALDSVLIMIGSQGSGKSSFVSTYLKPLNYTTVNR 303 (369)
Q Consensus 268 ~~~~~~lIll~G~pGSGKSTla~~L~~~~~~~~i~~ 303 (369)
.-+.|+=|+|.||||+|||++|++++..+++.++..
T Consensus 202 g~~~prGiLL~GPPGtGKT~lakAiA~~~~~~~~~v 237 (428)
T 4b4t_K 202 GIDPPRGVLLYGPPGTGKTMLVKAVANSTKAAFIRV 237 (428)
T ss_dssp CCCCCCEEEEESCTTTTHHHHHHHHHHHHTCEEEEE
T ss_pred CCCCCceEEEECCCCCCHHHHHHHHHHHhCCCeEEE
Confidence 345567899999999999999999999987655543
No 275
>3u61_B DNA polymerase accessory protein 44; AAA+, ATP hydrolase, clamp loader, sliding clamp, primer-TEM DNA, DNA binding protein-DNA complex; HET: DNA ADP 08T; 3.20A {Enterobacteria phage T4} PDB: 3u5z_B* 3u60_B*
Probab=97.01 E-value=0.0017 Score=61.06 Aligned_cols=85 Identities=14% Similarity=0.185 Sum_probs=51.6
Q ss_pred ccEEEEEEcCCCCcHHHHHHHHhccCCcE--EEeCCcchhHHHHHHHHHHHHh------CCCcEEEeCCCC-C-HHHHHH
Q psy4598 271 LDSVLIMIGSQGSGKSSFVSTYLKPLNYT--TVNRDTLGSWQKCVSVMKAALD------SGLSVVVDNTNP-D-KESRHR 340 (369)
Q Consensus 271 ~~~lIll~G~pGSGKSTla~~L~~~~~~~--~i~~D~~~~~~~~~~~~~~~l~------~g~~vIiD~tn~-~-~~~r~~ 340 (369)
.+.++++.|+||+|||++++.+++.++.. .++....+ ...+......... ....+|||.... . ......
T Consensus 47 ~~~~~L~~G~~G~GKT~la~~la~~l~~~~~~i~~~~~~-~~~i~~~~~~~~~~~~~~~~~~vliiDEi~~l~~~~~~~~ 125 (324)
T 3u61_B 47 IPHIILHSPSPGTGKTTVAKALCHDVNADMMFVNGSDCK-IDFVRGPLTNFASAASFDGRQKVIVIDEFDRSGLAESQRH 125 (324)
T ss_dssp CCSEEEECSSTTSSHHHHHHHHHHHTTEEEEEEETTTCC-HHHHHTHHHHHHHBCCCSSCEEEEEEESCCCGGGHHHHHH
T ss_pred CCeEEEeeCcCCCCHHHHHHHHHHHhCCCEEEEcccccC-HHHHHHHHHHHHhhcccCCCCeEEEEECCcccCcHHHHHH
Confidence 45688999999999999999999987644 44544433 2222233333332 234677887653 4 556666
Q ss_pred HHHHHHhcCCeEEEEE
Q psy4598 341 YIEAAKQHGVRCIAVH 356 (369)
Q Consensus 341 ~~~la~~~~~~v~~v~ 356 (369)
+........-.+.+|.
T Consensus 126 L~~~le~~~~~~~iI~ 141 (324)
T 3u61_B 126 LRSFMEAYSSNCSIII 141 (324)
T ss_dssp HHHHHHHHGGGCEEEE
T ss_pred HHHHHHhCCCCcEEEE
Confidence 6666555433333333
No 276
>4b4t_L 26S protease subunit RPT4; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.00 E-value=0.0008 Score=66.65 Aligned_cols=35 Identities=11% Similarity=0.209 Sum_probs=29.2
Q ss_pred cccccEEEEEEcCCCCcHHHHHHHHhccCCcEEEe
Q psy4598 268 KAALDSVLIMIGSQGSGKSSFVSTYLKPLNYTTVN 302 (369)
Q Consensus 268 ~~~~~~lIll~G~pGSGKSTla~~L~~~~~~~~i~ 302 (369)
....|+=|+|.||||+|||++|++++...++.++.
T Consensus 211 g~~~prGvLL~GPPGtGKTllAkAiA~e~~~~~~~ 245 (437)
T 4b4t_L 211 GIKPPKGVLLYGPPGTGKTLLAKAVAATIGANFIF 245 (437)
T ss_dssp CCCCCCEEEEESCTTSSHHHHHHHHHHHHTCEEEE
T ss_pred CCCCCCeEEEECCCCCcHHHHHHHHHHHhCCCEEE
Confidence 34456789999999999999999999998765554
No 277
>4b4t_J 26S protease regulatory subunit 8 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.00 E-value=0.00072 Score=66.19 Aligned_cols=34 Identities=18% Similarity=0.291 Sum_probs=28.6
Q ss_pred ccccEEEEEEcCCCCcHHHHHHHHhccCCcEEEe
Q psy4598 269 AALDSVLIMIGSQGSGKSSFVSTYLKPLNYTTVN 302 (369)
Q Consensus 269 ~~~~~lIll~G~pGSGKSTla~~L~~~~~~~~i~ 302 (369)
.+.|+=|+|.||||+|||.+|++++...++.++.
T Consensus 179 i~~prGvLL~GPPGTGKTllAkAiA~e~~~~f~~ 212 (405)
T 4b4t_J 179 IAQPKGVILYGPPGTGKTLLARAVAHHTDCKFIR 212 (405)
T ss_dssp CCCCCCEEEESCSSSSHHHHHHHHHHHHTCEEEE
T ss_pred CCCCCceEEeCCCCCCHHHHHHHHHHhhCCCceE
Confidence 3446778999999999999999999998766554
No 278
>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10
Probab=96.99 E-value=0.00053 Score=64.29 Aligned_cols=43 Identities=28% Similarity=0.420 Sum_probs=36.6
Q ss_pred ceEEEEecCCceeec-CCCCCCCCCccccccccccHHHHHHHHHHCCcEEEEEecC
Q psy4598 25 AKIASFDLDGTLITT-KSGKVFPVDTHDWKLLFSNIESVLKQYLDDGYKLVIFTNQ 79 (369)
Q Consensus 25 ~k~~~fDlDgTLi~~-~sg~~~~~~~~d~~~~~p~v~~~L~~L~~~G~~i~i~TNq 79 (369)
.|+++||+||||+.. .. .+.|...++|++|+++|+.++|+|..
T Consensus 27 ikli~~DlDGTLl~~~~~------------~is~~~~~al~~l~~~Gi~v~iaTGR 70 (301)
T 2b30_A 27 IKLLLIDFDGTLFVDKDI------------KVPSENIDAIKEAIEKGYMVSICTGR 70 (301)
T ss_dssp CCEEEEETBTTTBCCTTT------------CSCHHHHHHHHHHHHHTCEEEEECSS
T ss_pred ccEEEEECCCCCcCCCCC------------ccCHHHHHHHHHHHHCCCEEEEEcCC
Confidence 589999999999965 31 15678999999999999999999963
No 279
>3n70_A Transport activator; sigma-54, ntpase, PSI, MCSG, structural genomics, center for structural genomics; 2.80A {Escherichia coli}
Probab=96.98 E-value=0.0024 Score=52.94 Aligned_cols=88 Identities=10% Similarity=0.109 Sum_probs=50.6
Q ss_pred EEEEEcCCCCcHHHHHHHHhccC-----CcEEEeCCcchhHHHHHHHHHHHHhCCCcEEEeCCC-CCHHHHHHHHHHHHh
Q psy4598 274 VLIMIGSQGSGKSSFVSTYLKPL-----NYTTVNRDTLGSWQKCVSVMKAALDSGLSVVVDNTN-PDKESRHRYIEAAKQ 347 (369)
Q Consensus 274 lIll~G~pGSGKSTla~~L~~~~-----~~~~i~~D~~~~~~~~~~~~~~~l~~g~~vIiD~tn-~~~~~r~~~~~la~~ 347 (369)
-|+|.|+||+|||++|+.+.... ..+ ++...+..-........ . ..+..+++|... +.......+......
T Consensus 26 ~vll~G~~GtGKt~lA~~i~~~~~~~~~~~v-~~~~~~~~~~~~~~~~~-~-a~~g~l~ldei~~l~~~~q~~Ll~~l~~ 102 (145)
T 3n70_A 26 AVWLYGAPGTGRMTGARYLHQFGRNAQGEFV-YRELTPDNAPQLNDFIA-L-AQGGTLVLSHPEHLTREQQYHLVQLQSQ 102 (145)
T ss_dssp CEEEESSTTSSHHHHHHHHHHSSTTTTSCCE-EEECCTTTSSCHHHHHH-H-HTTSCEEEECGGGSCHHHHHHHHHHHHS
T ss_pred CEEEECCCCCCHHHHHHHHHHhCCccCCCEE-EECCCCCcchhhhcHHH-H-cCCcEEEEcChHHCCHHHHHHHHHHHhh
Confidence 47999999999999999998763 344 65544421111111111 1 234577888754 455556666666555
Q ss_pred cCCeEEEEEE-eCCHHHH
Q psy4598 348 HGVRCIAVHM-NISKEHA 364 (369)
Q Consensus 348 ~~~~v~~v~l-~~~~e~~ 364 (369)
....+++|.. +.+.+..
T Consensus 103 ~~~~~~~I~~t~~~~~~~ 120 (145)
T 3n70_A 103 EHRPFRLIGIGDTSLVEL 120 (145)
T ss_dssp SSCSSCEEEEESSCHHHH
T ss_pred cCCCEEEEEECCcCHHHH
Confidence 5444444433 4454443
No 280
>1sxj_E Activator 1 40 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=96.98 E-value=0.0025 Score=60.50 Aligned_cols=23 Identities=26% Similarity=0.534 Sum_probs=20.5
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhcc
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKP 295 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~ 295 (369)
+. +++.|+||+||||+++.++..
T Consensus 37 ~~-~ll~Gp~G~GKTtl~~~la~~ 59 (354)
T 1sxj_E 37 PH-LLLYGPNGTGKKTRCMALLES 59 (354)
T ss_dssp CC-EEEECSTTSSHHHHHHTHHHH
T ss_pred Ce-EEEECCCCCCHHHHHHHHHHH
Confidence 45 899999999999999999874
No 281
>4b4t_I 26S protease regulatory subunit 4 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=96.98 E-value=0.00092 Score=65.87 Aligned_cols=36 Identities=19% Similarity=0.274 Sum_probs=29.6
Q ss_pred ccccccEEEEEEcCCCCcHHHHHHHHhccCCcEEEe
Q psy4598 267 MKAALDSVLIMIGSQGSGKSSFVSTYLKPLNYTTVN 302 (369)
Q Consensus 267 ~~~~~~~lIll~G~pGSGKSTla~~L~~~~~~~~i~ 302 (369)
...+.|+=|+|.||||+|||.+|++++...++.++.
T Consensus 211 ~Gi~~prGvLLyGPPGTGKTlLAkAiA~e~~~~fi~ 246 (437)
T 4b4t_I 211 MGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLR 246 (437)
T ss_dssp HTCCCCSEEEEESSTTTTHHHHHHHHHHHHTCEEEE
T ss_pred CCCCCCCCCceECCCCchHHHHHHHHHHHhCCCEEE
Confidence 334556789999999999999999999998765554
No 282
>3c8u_A Fructokinase; YP_612366.1, putative fructose transport system kinase, STRU genomics, joint center for structural genomics, JCSG; 1.95A {Silicibacter SP}
Probab=96.96 E-value=0.0004 Score=61.37 Aligned_cols=37 Identities=24% Similarity=0.354 Sum_probs=29.8
Q ss_pred cccEEEEEEcCCCCcHHHHHHHHhccCC-----cEEEeCCcc
Q psy4598 270 ALDSVLIMIGSQGSGKSSFVSTYLKPLN-----YTTVNRDTL 306 (369)
Q Consensus 270 ~~~~lIll~G~pGSGKSTla~~L~~~~~-----~~~i~~D~~ 306 (369)
....+|.|+|++||||||+++.|+..+. ..+|..|.+
T Consensus 20 ~~g~~v~I~G~sGsGKSTl~~~l~~~~~~~g~~~g~v~~d~~ 61 (208)
T 3c8u_A 20 PGRQLVALSGAPGSGKSTLSNPLAAALSAQGLPAEVVPMDGF 61 (208)
T ss_dssp CSCEEEEEECCTTSCTHHHHHHHHHHHHHTTCCEEEEESGGG
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHHHhhcCCceEEEecCCC
Confidence 3457999999999999999999987653 567777654
No 283
>2p65_A Hypothetical protein PF08_0063; CLPB, malaria, structural genomics, structural genomics consortium, SGC, unknown function; 1.70A {Plasmodium falciparum}
Probab=96.95 E-value=0.00089 Score=56.77 Aligned_cols=26 Identities=23% Similarity=0.418 Sum_probs=22.3
Q ss_pred ccEEEEEEcCCCCcHHHHHHHHhccC
Q psy4598 271 LDSVLIMIGSQGSGKSSFVSTYLKPL 296 (369)
Q Consensus 271 ~~~lIll~G~pGSGKSTla~~L~~~~ 296 (369)
.+..++|.|+||+||||+++.+++.+
T Consensus 42 ~~~~vll~G~~G~GKT~la~~~~~~~ 67 (187)
T 2p65_A 42 TKNNPILLGDPGVGKTAIVEGLAIKI 67 (187)
T ss_dssp SSCEEEEESCGGGCHHHHHHHHHHHH
T ss_pred CCCceEEECCCCCCHHHHHHHHHHHH
Confidence 34567999999999999999998764
No 284
>2kjq_A DNAA-related protein; solution structure, NESG, structural genomics, PSI-2, protei structure initiative; NMR {Neisseria meningitidis serogroup B}
Probab=96.92 E-value=0.0013 Score=55.26 Aligned_cols=53 Identities=15% Similarity=0.258 Sum_probs=36.8
Q ss_pred EEEEEEcCCCCcHHHHHHHHhccC---C--cEEEeCCcchhHHHHHHHHHHHHhCCCcEEEeCCCC
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKPL---N--YTTVNRDTLGSWQKCVSVMKAALDSGLSVVVDNTNP 333 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~~---~--~~~i~~D~~~~~~~~~~~~~~~l~~g~~vIiD~tn~ 333 (369)
..++|.|++||||||+++.++... + ..+++...+... ..+.....+|+|....
T Consensus 37 ~~~~l~G~~G~GKTtL~~~i~~~~~~~g~~~~~~~~~~~~~~--------~~~~~~~lLilDE~~~ 94 (149)
T 2kjq_A 37 QFIYVWGEEGAGKSHLLQAWVAQALEAGKNAAYIDAASMPLT--------DAAFEAEYLAVDQVEK 94 (149)
T ss_dssp SEEEEESSSTTTTCHHHHHHHHHHHTTTCCEEEEETTTSCCC--------GGGGGCSEEEEESTTC
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHhcCCcEEEEcHHHhhHH--------HHHhCCCEEEEeCccc
Confidence 467899999999999999998754 4 667776654322 1233445677886543
No 285
>3h4m_A Proteasome-activating nucleotidase; ATPase, PAN, ATP-binding, nucleotide-binding, HY; HET: ADP; 3.11A {Methanocaldococcus jannaschii}
Probab=96.90 E-value=0.0015 Score=60.08 Aligned_cols=31 Identities=19% Similarity=0.318 Sum_probs=25.8
Q ss_pred ccEEEEEEcCCCCcHHHHHHHHhccCCcEEE
Q psy4598 271 LDSVLIMIGSQGSGKSSFVSTYLKPLNYTTV 301 (369)
Q Consensus 271 ~~~lIll~G~pGSGKSTla~~L~~~~~~~~i 301 (369)
.+.-++|.|+||+|||+++++++...+..++
T Consensus 50 ~~~~~ll~G~~GtGKT~la~~la~~~~~~~~ 80 (285)
T 3h4m_A 50 PPKGILLYGPPGTGKTLLAKAVATETNATFI 80 (285)
T ss_dssp CCSEEEEESSSSSSHHHHHHHHHHHTTCEEE
T ss_pred CCCeEEEECCCCCcHHHHHHHHHHHhCCCEE
Confidence 3456899999999999999999998765443
No 286
>4b4t_H 26S protease regulatory subunit 7 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=96.90 E-value=0.00099 Score=66.23 Aligned_cols=34 Identities=15% Similarity=0.239 Sum_probs=29.0
Q ss_pred ccccEEEEEEcCCCCcHHHHHHHHhccCCcEEEe
Q psy4598 269 AALDSVLIMIGSQGSGKSSFVSTYLKPLNYTTVN 302 (369)
Q Consensus 269 ~~~~~lIll~G~pGSGKSTla~~L~~~~~~~~i~ 302 (369)
-..|+=|+|.||||+|||++|++++...++.++.
T Consensus 240 i~pprGILLyGPPGTGKTlLAkAiA~e~~~~fi~ 273 (467)
T 4b4t_H 240 IDPPKGILLYGPPGTGKTLCARAVANRTDATFIR 273 (467)
T ss_dssp CCCCSEEEECSCTTSSHHHHHHHHHHHHTCEEEE
T ss_pred CCCCCceEeeCCCCCcHHHHHHHHHhccCCCeEE
Confidence 3457789999999999999999999998766554
No 287
>1vma_A Cell division protein FTSY; TM0570, structural genomics, JCS protein structure initiative, PSI, joint center for structu genomics; HET: CIT; 1.60A {Thermotoga maritima} SCOP: a.24.13.1 c.37.1.10
Probab=96.88 E-value=0.0047 Score=58.23 Aligned_cols=38 Identities=21% Similarity=0.352 Sum_probs=30.7
Q ss_pred cccEEEEEEcCCCCcHHHHHHHHhccC-----CcEEEeCCcch
Q psy4598 270 ALDSVLIMIGSQGSGKSSFVSTYLKPL-----NYTTVNRDTLG 307 (369)
Q Consensus 270 ~~~~lIll~G~pGSGKSTla~~L~~~~-----~~~~i~~D~~~ 307 (369)
..+.+|+++|++||||||++..|+..+ .+.+++.|.++
T Consensus 102 ~~~~vi~ivG~~GsGKTTl~~~LA~~l~~~g~kV~lv~~D~~r 144 (306)
T 1vma_A 102 EPPFVIMVVGVNGTGKTTSCGKLAKMFVDEGKSVVLAAADTFR 144 (306)
T ss_dssp SSCEEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEEECTTC
T ss_pred CCCeEEEEEcCCCChHHHHHHHHHHHHHhcCCEEEEEcccccc
Confidence 346799999999999999999998653 46677888764
No 288
>1iqp_A RFCS; clamp loader, extended AAA-ATPase domain, complex with ADP, replication; HET: ADP; 2.80A {Pyrococcus furiosus} SCOP: a.80.1.1 c.37.1.20
Probab=96.88 E-value=0.0026 Score=59.23 Aligned_cols=85 Identities=13% Similarity=0.151 Sum_probs=50.9
Q ss_pred EEEEEcCCCCcHHHHHHHHhccC-------CcEEEeCCcchhHHHHHHHHHHHH-------hCCCcEEEeCCC-CCHHHH
Q psy4598 274 VLIMIGSQGSGKSSFVSTYLKPL-------NYTTVNRDTLGSWQKCVSVMKAAL-------DSGLSVVVDNTN-PDKESR 338 (369)
Q Consensus 274 lIll~G~pGSGKSTla~~L~~~~-------~~~~i~~D~~~~~~~~~~~~~~~l-------~~g~~vIiD~tn-~~~~~r 338 (369)
.+++.|+||+||||+++.+++.+ .+..++.........+........ .....+|+|... .+....
T Consensus 48 ~~ll~G~~G~GKT~la~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vliiDe~~~l~~~~~ 127 (327)
T 1iqp_A 48 HLLFAGPPGVGKTTAALALARELFGENWRHNFLELNASDERGINVIREKVKEFARTKPIGGASFKIIFLDEADALTQDAQ 127 (327)
T ss_dssp EEEEESCTTSSHHHHHHHHHHHHHGGGHHHHEEEEETTCHHHHHTTHHHHHHHHHSCCGGGCSCEEEEEETGGGSCHHHH
T ss_pred eEEEECcCCCCHHHHHHHHHHHhcCCcccCceEEeeccccCchHHHHHHHHHHHhhCCcCCCCCeEEEEeCCCcCCHHHH
Confidence 38999999999999999998864 244555444322111111222221 224467788754 456667
Q ss_pred HHHHHHHHhcCCeEEEEEEe
Q psy4598 339 HRYIEAAKQHGVRCIAVHMN 358 (369)
Q Consensus 339 ~~~~~la~~~~~~v~~v~l~ 358 (369)
..+.....+....+.++...
T Consensus 128 ~~L~~~le~~~~~~~~i~~~ 147 (327)
T 1iqp_A 128 QALRRTMEMFSSNVRFILSC 147 (327)
T ss_dssp HHHHHHHHHTTTTEEEEEEE
T ss_pred HHHHHHHHhcCCCCeEEEEe
Confidence 77777776655555555443
No 289
>4a74_A DNA repair and recombination protein RADA; hydrolase, recombinase; HET: DNA ANP; 1.48A {Pyrococcus furiosus} PDB: 4a6x_A* 4a6p_A* 4a7o_A*
Probab=96.87 E-value=0.0039 Score=55.01 Aligned_cols=23 Identities=26% Similarity=0.432 Sum_probs=20.9
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhc
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLK 294 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~ 294 (369)
-.++.|+|+|||||||+++.++.
T Consensus 25 G~~~~l~G~nGsGKSTll~~l~g 47 (231)
T 4a74_A 25 QAITEVFGEFGSGKTQLAHTLAV 47 (231)
T ss_dssp SEEEEEEESTTSSHHHHHHHHHH
T ss_pred CcEEEEECCCCCCHHHHHHHHHH
Confidence 36899999999999999999975
No 290
>3tqc_A Pantothenate kinase; biosynthesis of cofactors, prosthetic groups, carriers, TRAN; HET: ADP; 2.30A {Coxiella burnetii}
Probab=96.86 E-value=0.00068 Score=64.49 Aligned_cols=38 Identities=21% Similarity=0.264 Sum_probs=31.7
Q ss_pred ccccEEEEEEcCCCCcHHHHHHHHhccC-------CcEEEeCCcc
Q psy4598 269 AALDSVLIMIGSQGSGKSSFVSTYLKPL-------NYTTVNRDTL 306 (369)
Q Consensus 269 ~~~~~lIll~G~pGSGKSTla~~L~~~~-------~~~~i~~D~~ 306 (369)
...|.+|-++|++||||||+++.|...+ .+.+++.|.+
T Consensus 89 ~~~p~iigI~GpsGSGKSTl~~~L~~ll~~~~~~~~v~~i~~D~f 133 (321)
T 3tqc_A 89 PKVPYIIGIAGSVAVGKSTTSRVLKALLSRWPDHPNVEVITTDGF 133 (321)
T ss_dssp CCCCEEEEEECCTTSSHHHHHHHHHHHHTTSTTCCCEEEEEGGGG
T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHhcccCCCCeEEEEeeccc
Confidence 4557899999999999999999998754 3677888885
No 291
>2vhj_A Ntpase P4, P4; non- hydrolysable ATP analogue, hydrolase, virus dsRNA, molecular motor, packaging ATPase, hexameric helicase; HET: ADP; 1.80A {Pseudomonas phage PHI12} PDB: 2vhq_A* 1w44_A* 1w46_A* 1w47_A* 1w48_A* 1w49_A* 1w4a_A* 1w4b_A* 1w4c_A 2vht_A* 2vhu_A* 2vhc_A*
Probab=96.86 E-value=0.0029 Score=60.10 Aligned_cols=60 Identities=17% Similarity=0.214 Sum_probs=38.6
Q ss_pred EEEEEEcCCCCcHHHHHHHHhcc--CCcEEEeC------Ccch-hHHHHHHHHHHHHhCCCcEEEeCCC
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKP--LNYTTVNR------DTLG-SWQKCVSVMKAALDSGLSVVVDNTN 332 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~--~~~~~i~~------D~~~-~~~~~~~~~~~~l~~g~~vIiD~tn 332 (369)
.++++.|+||+||||||.+++.. ..+.+++. +.+. ..+...+.+.+.+.....+|||...
T Consensus 124 sviLI~GpPGsGKTtLAlqlA~~~G~~VlyIs~~~eE~v~~~~~~le~~l~~i~~~l~~~~LLVIDsI~ 192 (331)
T 2vhj_A 124 GMVIVTGKGNSGKTPLVHALGEALGGKDKYATVRFGEPLSGYNTDFNVFVDDIARAMLQHRVIVIDSLK 192 (331)
T ss_dssp EEEEEECSCSSSHHHHHHHHHHHHHTTSCCEEEEBSCSSTTCBCCHHHHHHHHHHHHHHCSEEEEECCT
T ss_pred cEEEEEcCCCCCHHHHHHHHHHhCCCCEEEEEecchhhhhhhhcCHHHHHHHHHHHHhhCCEEEEeccc
Confidence 56799999999999999999864 23456665 2221 2233344444444433378899754
No 292
>1odf_A YGR205W, hypothetical 33.3 kDa protein in ADE3-Ser2 intergenic region; yeast protein, ATP binding protein; 2.25A {Saccharomyces cerevisiae} SCOP: c.37.1.6
Probab=96.81 E-value=0.00066 Score=63.60 Aligned_cols=39 Identities=23% Similarity=0.187 Sum_probs=31.4
Q ss_pred cccccEEEEEEcCCCCcHHHHHHHHhccCC-------cEEE-eCCcc
Q psy4598 268 KAALDSVLIMIGSQGSGKSSFVSTYLKPLN-------YTTV-NRDTL 306 (369)
Q Consensus 268 ~~~~~~lIll~G~pGSGKSTla~~L~~~~~-------~~~i-~~D~~ 306 (369)
....+.+|.++|++||||||+++.|+..++ ...+ +.|.+
T Consensus 27 ~~~~~~ii~I~G~sGsGKSTla~~L~~~l~~~g~~~~~~~iv~~D~f 73 (290)
T 1odf_A 27 GNKCPLFIFFSGPQGSGKSFTSIQIYNHLMEKYGGEKSIGYASIDDF 73 (290)
T ss_dssp TCCSCEEEEEECCTTSSHHHHHHHHHHHHHHHHGGGSCEEEEEGGGG
T ss_pred cCCCCeEEEEECCCCCCHHHHHHHHHHHhhhcCCCCceEEEeccccc
Confidence 345578999999999999999999987642 4556 88886
No 293
>2px0_A Flagellar biosynthesis protein FLHF; SRP GTPase, flagellum, protein transport, biosynthetic protein; HET: GNP; 3.00A {Bacillus subtilis} PDB: 2px3_A* 3syn_A*
Probab=96.79 E-value=0.007 Score=56.71 Aligned_cols=36 Identities=19% Similarity=0.382 Sum_probs=28.8
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhcc----C--CcEEEeCCcch
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKP----L--NYTTVNRDTLG 307 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~----~--~~~~i~~D~~~ 307 (369)
+.+|+++|++||||||++..|+.. . .+.+++.|..+
T Consensus 105 g~vi~lvG~~GsGKTTl~~~LA~~l~~~~G~~V~lv~~D~~r 146 (296)
T 2px0_A 105 SKYIVLFGSTGAGKTTTLAKLAAISMLEKHKKIAFITTDTYR 146 (296)
T ss_dssp SSEEEEEESTTSSHHHHHHHHHHHHHHTTCCCEEEEECCCSS
T ss_pred CcEEEEECCCCCCHHHHHHHHHHHHHHhcCCEEEEEecCccc
Confidence 457899999999999999998743 2 46778888764
No 294
>2jeo_A Uridine-cytidine kinase 1; UCK, transferase, ATP-binding, nucleoside kinase, nucleotide-binding; 2.50A {Homo sapiens} PDB: 2uvq_A*
Probab=96.78 E-value=0.00077 Score=61.10 Aligned_cols=36 Identities=19% Similarity=0.299 Sum_probs=29.3
Q ss_pred ccEEEEEEcCCCCcHHHHHHHHhccCCcE----------EEeCCcc
Q psy4598 271 LDSVLIMIGSQGSGKSSFVSTYLKPLNYT----------TVNRDTL 306 (369)
Q Consensus 271 ~~~lIll~G~pGSGKSTla~~L~~~~~~~----------~i~~D~~ 306 (369)
.+.+|-|+|++||||||+++.|+..++.. ++++|.+
T Consensus 24 ~g~iigI~G~~GsGKSTl~k~L~~~lG~~~~~~~~~~i~~v~~d~~ 69 (245)
T 2jeo_A 24 RPFLIGVSGGTASGKSTVCEKIMELLGQNEVEQRQRKVVILSQDRF 69 (245)
T ss_dssp CSEEEEEECSTTSSHHHHHHHHHHHHTGGGSCGGGCSEEEEEGGGG
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHhchhcccccCCceEEEeCCcC
Confidence 34689999999999999999998876543 6777754
No 295
>1hqc_A RUVB; extended AAA-ATPase domain, complex with nucleotide, hydrolase; HET: ADE; 3.20A {Thermus thermophilus} SCOP: a.4.5.11 c.37.1.20 PDB: 1ixs_B* 1ixr_C*
Probab=96.75 E-value=0.0014 Score=61.38 Aligned_cols=76 Identities=13% Similarity=0.298 Sum_probs=49.2
Q ss_pred EEEEEEcCCCCcHHHHHHHHhccCC--cEEEeCCcchhHHHHHHHHHHHHhCCCcEEEeCCCC-CHHHHHHHHHHHHhc
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKPLN--YTTVNRDTLGSWQKCVSVMKAALDSGLSVVVDNTNP-DKESRHRYIEAAKQH 348 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~~~--~~~i~~D~~~~~~~~~~~~~~~l~~g~~vIiD~tn~-~~~~r~~~~~la~~~ 348 (369)
..|+|.|+||+|||++|+.+++..+ ...++...+.....+.......+..+..+++|.... .......+.......
T Consensus 39 ~~vll~G~~GtGKT~la~~i~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~l~lDEi~~l~~~~~~~L~~~l~~~ 117 (324)
T 1hqc_A 39 EHLLLFGPPGLGKTTLAHVIAHELGVNLRVTSGPAIEKPGDLAAILANSLEEGDILFIDEIHRLSRQAEEHLYPAMEDF 117 (324)
T ss_dssp CCCEEECCTTCCCHHHHHHHHHHHTCCEEEECTTTCCSHHHHHHHHTTTCCTTCEEEETTTTSCCHHHHHHHHHHHHHS
T ss_pred CcEEEECCCCCCHHHHHHHHHHHhCCCEEEEeccccCChHHHHHHHHHhccCCCEEEEECCcccccchHHHHHHHHHhh
Confidence 4689999999999999999998765 345565555433333333333234566788887653 455556666665554
No 296
>1sq5_A Pantothenate kinase; P-loop, transferase; HET: PAU ADP; 2.20A {Escherichia coli} SCOP: c.37.1.6 PDB: 1esm_A* 1esn_A*
Probab=96.73 E-value=0.001 Score=62.74 Aligned_cols=37 Identities=19% Similarity=0.276 Sum_probs=29.9
Q ss_pred cccEEEEEEcCCCCcHHHHHHHHhccCC-------cEEEeCCcc
Q psy4598 270 ALDSVLIMIGSQGSGKSSFVSTYLKPLN-------YTTVNRDTL 306 (369)
Q Consensus 270 ~~~~lIll~G~pGSGKSTla~~L~~~~~-------~~~i~~D~~ 306 (369)
..+.+|.|+|++||||||+++.|+..++ +.+|+.|.+
T Consensus 78 ~~g~iigI~G~~GsGKSTl~~~L~~~l~~~~~~G~i~vi~~d~~ 121 (308)
T 1sq5_A 78 RIPYIISIAGSVAVGKSTTARVLQALLSRWPEHRRVELITTDGF 121 (308)
T ss_dssp CCCEEEEEEECTTSSHHHHHHHHHHHHTTSTTCCCEEEEEGGGG
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHhhCCCCCeEEEEecCCc
Confidence 4457999999999999999999987543 667777754
No 297
>2j37_W Signal recognition particle 54 kDa protein (SRP54); ribosome, SRP, translation/RNA; 8.00A {Canis SP} PDB: 1wgw_A
Probab=96.73 E-value=0.008 Score=60.56 Aligned_cols=37 Identities=27% Similarity=0.370 Sum_probs=29.1
Q ss_pred ccEEEEEEcCCCCcHHHHHHHHhcc-----CCcEEEeCCcch
Q psy4598 271 LDSVLIMIGSQGSGKSSFVSTYLKP-----LNYTTVNRDTLG 307 (369)
Q Consensus 271 ~~~lIll~G~pGSGKSTla~~L~~~-----~~~~~i~~D~~~ 307 (369)
.+.+|+++|+|||||||++..|+.. ....+++.|.++
T Consensus 100 ~~~vI~ivG~~GvGKTTl~~kLA~~l~~~G~kVllVd~D~~r 141 (504)
T 2j37_W 100 KQNVIMFVGLQGSGKTTTCSKLAYYYQRKGWKTCLICADTFR 141 (504)
T ss_dssp --EEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEECCSS
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHHhCCCeEEEEeccccc
Confidence 3578999999999999999999854 356778888764
No 298
>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15
Probab=96.72 E-value=0.001 Score=59.98 Aligned_cols=46 Identities=17% Similarity=0.246 Sum_probs=35.5
Q ss_pred eEEEEecCCceeecCCCCCCCCCccccccccccHHHHHHHHHHCCcEEEEEecC
Q psy4598 26 KIASFDLDGTLITTKSGKVFPVDTHDWKLLFSNIESVLKQYLDDGYKLVIFTNQ 79 (369)
Q Consensus 26 k~~~fDlDgTLi~~~sg~~~~~~~~d~~~~~p~v~~~L~~L~~~G~~i~i~TNq 79 (369)
|+++||+||||+.... ++.+ ..+.|...++|++|+++| +++|+|..
T Consensus 2 kli~~DlDGTLl~~~~------~~~~-~~i~~~~~~al~~l~~~g-~v~iaTGR 47 (239)
T 1u02_A 2 SLIFLDYDGTLVPIIM------NPEE-SYADAGLLSLISDLKERF-DTYIVTGR 47 (239)
T ss_dssp CEEEEECBTTTBCCCS------CGGG-CCCCHHHHHHHHHHHHHS-EEEEECSS
T ss_pred eEEEEecCCCCcCCCC------Cccc-CCCCHHHHHHHHHHhcCC-CEEEEeCC
Confidence 6899999999996421 1112 125788999999999999 99999973
No 299
>1sxj_A Activator 1 95 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=96.72 E-value=0.0014 Score=66.30 Aligned_cols=31 Identities=19% Similarity=0.351 Sum_probs=26.8
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhccCCcEEEe
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKPLNYTTVN 302 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~~~~~~i~ 302 (369)
+..++|+|+||+||||+|+.+++.+++.++.
T Consensus 77 ~~~lLL~GppGtGKTtla~~la~~l~~~~i~ 107 (516)
T 1sxj_A 77 FRAAMLYGPPGIGKTTAAHLVAQELGYDILE 107 (516)
T ss_dssp CSEEEEECSTTSSHHHHHHHHHHHTTCEEEE
T ss_pred CcEEEEECCCCCCHHHHHHHHHHHcCCCEEE
Confidence 4688999999999999999999998765554
No 300
>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A
Probab=96.69 E-value=0.0012 Score=59.66 Aligned_cols=42 Identities=19% Similarity=0.412 Sum_probs=35.3
Q ss_pred CceEEEEecCCceeecCCCCCCCCCccccccccccHHHHHHHHHHCCcEEEEEec
Q psy4598 24 SAKIASFDLDGTLITTKSGKVFPVDTHDWKLLFSNIESVLKQYLDDGYKLVIFTN 78 (369)
Q Consensus 24 ~~k~~~fDlDgTLi~~~sg~~~~~~~~d~~~~~p~v~~~L~~L~~~G~~i~i~TN 78 (369)
+.|+++||+||||+.... .+-|...++|++|+++ ++++|+|-
T Consensus 5 ~~kli~~DlDGTLl~~~~------------~i~~~~~~al~~l~~~-i~v~iaTG 46 (246)
T 2amy_A 5 GPALCLFDVDGTLTAPRQ------------KITKEMDDFLQKLRQK-IKIGVVGG 46 (246)
T ss_dssp CSEEEEEESBTTTBCTTS------------CCCHHHHHHHHHHTTT-SEEEEECS
T ss_pred CceEEEEECCCCcCCCCc------------ccCHHHHHHHHHHHhC-CeEEEEcC
Confidence 468999999999996531 1467899999999999 99999996
No 301
>1svi_A GTP-binding protein YSXC; ENGB, GTPase, GDP, hydrolase; HET: GDP; 1.95A {Bacillus subtilis} SCOP: c.37.1.8 PDB: 1sul_A* 1svw_A*
Probab=96.68 E-value=0.0087 Score=51.13 Aligned_cols=25 Identities=24% Similarity=0.394 Sum_probs=21.3
Q ss_pred ccEEEEEEcCCCCcHHHHHHHHhcc
Q psy4598 271 LDSVLIMIGSQGSGKSSFVSTYLKP 295 (369)
Q Consensus 271 ~~~lIll~G~pGSGKSTla~~L~~~ 295 (369)
...-|+++|.+|+||||+...|...
T Consensus 22 ~~~~i~v~G~~~~GKSsli~~l~~~ 46 (195)
T 1svi_A 22 GLPEIALAGRSNVGKSSFINSLINR 46 (195)
T ss_dssp CCCEEEEEEBTTSSHHHHHHHHHTC
T ss_pred CCCEEEEECCCCCCHHHHHHHHhCC
Confidence 3456899999999999999999754
No 302
>1ye8_A Protein THEP1, hypothetical UPF0334 kinase-like protein AQ_1292; mixed alpha-beta protein, rossman fold, signaling protein, transferase; 1.40A {Aquifex aeolicus} SCOP: c.37.1.11
Probab=96.66 E-value=0.0032 Score=54.43 Aligned_cols=23 Identities=30% Similarity=0.624 Sum_probs=20.1
Q ss_pred EEEEEcCCCCcHHHHHHHHhccC
Q psy4598 274 VLIMIGSQGSGKSSFVSTYLKPL 296 (369)
Q Consensus 274 lIll~G~pGSGKSTla~~L~~~~ 296 (369)
.+.|+|++||||||+.+.++..+
T Consensus 2 ~i~l~G~nGsGKTTLl~~l~g~l 24 (178)
T 1ye8_A 2 KIIITGEPGVGKTTLVKKIVERL 24 (178)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHh
Confidence 47899999999999999998654
No 303
>3cf0_A Transitional endoplasmic reticulum ATPase; AAA, P97/VCP, ERAD, CDC48, ATP-binding, lipid-binding, nucle binding, nucleus, phosphoprotein, transport; HET: ADP; 3.00A {Mus musculus}
Probab=96.66 E-value=0.0011 Score=62.05 Aligned_cols=34 Identities=12% Similarity=0.215 Sum_probs=28.0
Q ss_pred ccEEEEEEcCCCCcHHHHHHHHhccCCcEEEeCC
Q psy4598 271 LDSVLIMIGSQGSGKSSFVSTYLKPLNYTTVNRD 304 (369)
Q Consensus 271 ~~~lIll~G~pGSGKSTla~~L~~~~~~~~i~~D 304 (369)
.+.-|+|.|+||+|||++|++++...+..++..+
T Consensus 48 ~~~~vLL~Gp~GtGKT~la~ala~~~~~~~i~v~ 81 (301)
T 3cf0_A 48 PSKGVLFYGPPGCGKTLLAKAIANECQANFISIK 81 (301)
T ss_dssp CCSEEEEECSSSSSHHHHHHHHHHHTTCEEEEEC
T ss_pred CCceEEEECCCCcCHHHHHHHHHHHhCCCEEEEE
Confidence 3467899999999999999999998876655443
No 304
>2yhs_A FTSY, cell division protein FTSY; cell cycle, protein targeting, simibi class GTPase, GTP-BIND membrane, nucleotide-binding; 1.60A {Escherichia coli} PDB: 2qy9_A 2xxa_B* 1fts_A
Probab=96.65 E-value=0.0091 Score=59.88 Aligned_cols=38 Identities=21% Similarity=0.420 Sum_probs=29.3
Q ss_pred cccEEEEEEcCCCCcHHHHHHHHhccC----CcEEE-eCCcch
Q psy4598 270 ALDSVLIMIGSQGSGKSSFVSTYLKPL----NYTTV-NRDTLG 307 (369)
Q Consensus 270 ~~~~lIll~G~pGSGKSTla~~L~~~~----~~~~i-~~D~~~ 307 (369)
..+.+|.|+|++||||||+.+.|+..+ +-+.+ +.|.++
T Consensus 291 ~~GeVI~LVGpNGSGKTTLl~~LAgll~~~~G~V~l~g~D~~r 333 (503)
T 2yhs_A 291 KAPFVILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAAGDTFR 333 (503)
T ss_dssp CTTEEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEECCCTTC
T ss_pred cCCeEEEEECCCcccHHHHHHHHHHHhhhcCCeEEEecCcccc
Confidence 346899999999999999999998643 44455 577654
No 305
>3pvs_A Replication-associated recombination protein A; maintenance of genome stability Pro recombination; 2.50A {Escherichia coli}
Probab=96.64 E-value=0.0029 Score=62.87 Aligned_cols=75 Identities=13% Similarity=0.247 Sum_probs=43.1
Q ss_pred EEEEEEcCCCCcHHHHHHHHhccCCcEEEe--CCcc--hhHHHHHHHHHHHHh--CCCcEEEeCCCC-CHHHHHHHHHHH
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKPLNYTTVN--RDTL--GSWQKCVSVMKAALD--SGLSVVVDNTNP-DKESRHRYIEAA 345 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~~~~~~i~--~D~~--~~~~~~~~~~~~~l~--~g~~vIiD~tn~-~~~~r~~~~~la 345 (369)
.-++|.|+||+||||+|+.+++..+..++. .... ...+.....+..... .+..++||.... +......++...
T Consensus 51 ~~vLL~GppGtGKTtlAr~ia~~~~~~f~~l~a~~~~~~~ir~~~~~a~~~~~~~~~~iLfIDEI~~l~~~~q~~LL~~l 130 (447)
T 3pvs_A 51 HSMILWGPPGTGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHI 130 (447)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHHTTCEEEEEETTTCCHHHHHHHHHHHHHHHHTTCCEEEEEETTTCC------CCHHHH
T ss_pred cEEEEECCCCCcHHHHHHHHHHHhCCCeEEEEeccCCHHHHHHHHHHHHHhhhcCCCcEEEEeChhhhCHHHHHHHHHHH
Confidence 468999999999999999999988655443 3222 122333333333322 344677887643 344445555555
Q ss_pred Hh
Q psy4598 346 KQ 347 (369)
Q Consensus 346 ~~ 347 (369)
.+
T Consensus 131 e~ 132 (447)
T 3pvs_A 131 ED 132 (447)
T ss_dssp HT
T ss_pred hc
Confidence 54
No 306
>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*
Probab=96.64 E-value=0.011 Score=57.98 Aligned_cols=47 Identities=47% Similarity=0.861 Sum_probs=40.2
Q ss_pred CCCceEEEEEcCCCCCcchhhhhccCCCcccccccccccchhhhhhh
Q psy4598 220 HDKKQVLIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTLGSWQKCVSV 266 (369)
Q Consensus 220 ~~~~~i~v~~g~~~~gks~~~~~~~~~~~~~~i~r~~~~~~~~~~~~ 266 (369)
...+.+++++|+|||||||+++.+....+|..|+.|.+..+..+...
T Consensus 255 ~~~~~lIil~G~pGSGKSTla~~L~~~~~~~~i~~D~~~~~~~~~~~ 301 (416)
T 3zvl_A 255 SPNPEVVVAVGFPGAGKSTFIQEHLVSAGYVHVNRDTLGSWQRCVSS 301 (416)
T ss_dssp CSSCCEEEEESCTTSSHHHHHHHHTGGGTCEECCGGGSCSHHHHHHH
T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHhcCcEEEccchHHHHHHHHHH
Confidence 45678999999999999999999887779999999999887766543
No 307
>3pfi_A Holliday junction ATP-dependent DNA helicase RUVB; probable holliday junction DNA helicase; HET: ADP; 2.69A {Campylobacter jejuni subsp}
Probab=96.63 E-value=0.0026 Score=60.08 Aligned_cols=76 Identities=12% Similarity=0.185 Sum_probs=48.5
Q ss_pred EEEEEEcCCCCcHHHHHHHHhccCCc--EEEeCCcchhHHHHHHHHHHHHhCCCcEEEeCCC-CCHHHHHHHHHHHHhcC
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKPLNY--TTVNRDTLGSWQKCVSVMKAALDSGLSVVVDNTN-PDKESRHRYIEAAKQHG 349 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~~~~--~~i~~D~~~~~~~~~~~~~~~l~~g~~vIiD~tn-~~~~~r~~~~~la~~~~ 349 (369)
.-|+|.|+||+|||++|+.+++..+. ..++...+.....+.... ..+..+..+++|... ........+.....+..
T Consensus 56 ~~vll~G~~GtGKT~la~~ia~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~vl~lDEi~~l~~~~~~~Ll~~l~~~~ 134 (338)
T 3pfi_A 56 DHILFSGPAGLGKTTLANIISYEMSANIKTTAAPMIEKSGDLAAIL-TNLSEGDILFIDEIHRLSPAIEEVLYPAMEDYR 134 (338)
T ss_dssp CCEEEECSTTSSHHHHHHHHHHHTTCCEEEEEGGGCCSHHHHHHHH-HTCCTTCEEEEETGGGCCHHHHHHHHHHHHTSC
T ss_pred CeEEEECcCCCCHHHHHHHHHHHhCCCeEEecchhccchhHHHHHH-HhccCCCEEEEechhhcCHHHHHHHHHHHHhcc
Confidence 45899999999999999999998754 445544443322222222 223456678888754 45566666666665544
No 308
>2qz4_A Paraplegin; AAA+, SPG7, protease, ADP, structural genomics, structural G consortium, SGC, ATP-binding, nucleotide-binding, hydrolase; HET: ADP; 2.22A {Homo sapiens}
Probab=96.63 E-value=0.001 Score=60.21 Aligned_cols=36 Identities=11% Similarity=0.314 Sum_probs=27.9
Q ss_pred ccEEEEEEcCCCCcHHHHHHHHhccCC--cEEEeCCcc
Q psy4598 271 LDSVLIMIGSQGSGKSSFVSTYLKPLN--YTTVNRDTL 306 (369)
Q Consensus 271 ~~~lIll~G~pGSGKSTla~~L~~~~~--~~~i~~D~~ 306 (369)
.+.-|+|.|+||+|||++|+.+++..+ ...++...+
T Consensus 38 ~~~~vll~G~~GtGKT~la~~la~~~~~~~~~~~~~~~ 75 (262)
T 2qz4_A 38 VPKGALLLGPPGCGKTLLAKAVATEAQVPFLAMAGAEF 75 (262)
T ss_dssp CCCEEEEESCTTSSHHHHHHHHHHHHTCCEEEEETTTT
T ss_pred CCceEEEECCCCCCHHHHHHHHHHHhCCCEEEechHHH
Confidence 345689999999999999999999865 445555443
No 309
>1sxj_B Activator 1 37 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=96.62 E-value=0.0044 Score=57.58 Aligned_cols=84 Identities=13% Similarity=0.098 Sum_probs=50.2
Q ss_pred EEEEcCCCCcHHHHHHHHhccC-------CcEEEeCCcchhHHHHHHHHHHHH-------hC-CCcEEEeCCC-CCHHHH
Q psy4598 275 LIMIGSQGSGKSSFVSTYLKPL-------NYTTVNRDTLGSWQKCVSVMKAAL-------DS-GLSVVVDNTN-PDKESR 338 (369)
Q Consensus 275 Ill~G~pGSGKSTla~~L~~~~-------~~~~i~~D~~~~~~~~~~~~~~~l-------~~-g~~vIiD~tn-~~~~~r 338 (369)
+++.|+||+||||+++.+++.+ .+..++.........+...+.... .. ...+|||... .+....
T Consensus 45 ~ll~G~~G~GKt~la~~l~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~viiiDe~~~l~~~~~ 124 (323)
T 1sxj_B 45 MIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASDDRGIDVVRNQIKHFAQKKLHLPPGKHKIVILDEADSMTAGAQ 124 (323)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHHGGGHHHHEEEECTTSCCSHHHHHTHHHHHHHBCCCCCTTCCEEEEEESGGGSCHHHH
T ss_pred EEEECcCCCCHHHHHHHHHHHhcCCcccCCEEEecCccccChHHHHHHHHHHHhccccCCCCCceEEEEECcccCCHHHH
Confidence 8999999999999999998864 244455433222333333333332 22 3467788753 355556
Q ss_pred HHHHHHHHhcCCeEEEEEEe
Q psy4598 339 HRYIEAAKQHGVRCIAVHMN 358 (369)
Q Consensus 339 ~~~~~la~~~~~~v~~v~l~ 358 (369)
..+.....+..-.+.++...
T Consensus 125 ~~L~~~le~~~~~~~~il~~ 144 (323)
T 1sxj_B 125 QALRRTMELYSNSTRFAFAC 144 (323)
T ss_dssp HTTHHHHHHTTTTEEEEEEE
T ss_pred HHHHHHHhccCCCceEEEEe
Confidence 66666666654444444443
No 310
>1lv7_A FTSH; alpha/beta domain, four helix bundle, hydrolase; 1.50A {Escherichia coli} SCOP: c.37.1.20
Probab=96.58 E-value=0.0011 Score=60.18 Aligned_cols=35 Identities=17% Similarity=0.401 Sum_probs=27.3
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhccCC--cEEEeCCcc
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKPLN--YTTVNRDTL 306 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~~~--~~~i~~D~~ 306 (369)
+.-|+|.|+||+||||+++.++...+ ...++...+
T Consensus 45 ~~~vll~G~~GtGKT~la~~la~~~~~~~~~i~~~~~ 81 (257)
T 1lv7_A 45 PKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDF 81 (257)
T ss_dssp CCEEEEECCTTSCHHHHHHHHHHHHTCCEEEECSCSS
T ss_pred CCeEEEECcCCCCHHHHHHHHHHHcCCCEEEEeHHHH
Confidence 34589999999999999999998765 455555444
No 311
>1sxj_D Activator 1 41 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=96.58 E-value=0.005 Score=58.11 Aligned_cols=83 Identities=12% Similarity=0.127 Sum_probs=48.1
Q ss_pred EEEEcCCCCcHHHHHHHHhccC--------CcEEEeCCcchhHHHHHHHHHHHH-----------------hCCCcEEEe
Q psy4598 275 LIMIGSQGSGKSSFVSTYLKPL--------NYTTVNRDTLGSWQKCVSVMKAAL-----------------DSGLSVVVD 329 (369)
Q Consensus 275 Ill~G~pGSGKSTla~~L~~~~--------~~~~i~~D~~~~~~~~~~~~~~~l-----------------~~g~~vIiD 329 (369)
++|.|+||+||||+++.+++.+ ....++.........+.+...... .....+++|
T Consensus 61 ~ll~G~~G~GKT~la~~la~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vliiD 140 (353)
T 1sxj_D 61 MLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSKPSKHDLENYPCPPYKIIILD 140 (353)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHHHHHHHTTSEEEECSSSCCCHHHHTTHHHHHHHSCCCCCCTTHHHHSCCCSCEEEEET
T ss_pred EEEECCCCCCHHHHHHHHHHHhCCCcccccceEEEccccccchHHHHHHHHHHhhhcccccchhhcccCCCCCceEEEEE
Confidence 8999999999999999998764 244455443222211111111111 122367788
Q ss_pred CCC-CCHHHHHHHHHHHHhcCCeEEEEEE
Q psy4598 330 NTN-PDKESRHRYIEAAKQHGVRCIAVHM 357 (369)
Q Consensus 330 ~tn-~~~~~r~~~~~la~~~~~~v~~v~l 357 (369)
... ........+.+...+......++..
T Consensus 141 E~~~l~~~~~~~Ll~~le~~~~~~~~il~ 169 (353)
T 1sxj_D 141 EADSMTADAQSALRRTMETYSGVTRFCLI 169 (353)
T ss_dssp TGGGSCHHHHHHHHHHHHHTTTTEEEEEE
T ss_pred CCCccCHHHHHHHHHHHHhcCCCceEEEE
Confidence 653 4566667777776665444444444
No 312
>3e70_C DPA, signal recognition particle receptor; FTSY, SRP-GTPase, protein-targeting, transport protein; HET: GDP; 1.97A {Pyrococcus furiosus} PDB: 3dmd_B 3dm9_B*
Probab=96.57 E-value=0.0074 Score=57.44 Aligned_cols=37 Identities=24% Similarity=0.393 Sum_probs=28.7
Q ss_pred cccEEEEEEcCCCCcHHHHHHHHhccC-----CcEEEeCCcc
Q psy4598 270 ALDSVLIMIGSQGSGKSSFVSTYLKPL-----NYTTVNRDTL 306 (369)
Q Consensus 270 ~~~~lIll~G~pGSGKSTla~~L~~~~-----~~~~i~~D~~ 306 (369)
..+.+|.|+|++||||||+.+.|+..+ .+.+...|..
T Consensus 127 ~~g~vi~lvG~nGaGKTTll~~Lag~l~~~~g~V~l~g~D~~ 168 (328)
T 3e70_C 127 EKPYVIMFVGFNGSGKTTTIAKLANWLKNHGFSVVIAASDTF 168 (328)
T ss_dssp CSSEEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEEECCS
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHHHHhcCCEEEEEeeccc
Confidence 346799999999999999999998653 3455566654
No 313
>2v1u_A Cell division control protein 6 homolog; DNA replication, nucleotide-binding, replication, archaea; HET: ADP; 3.10A {Aeropyrum pernix}
Probab=96.56 E-value=0.0063 Score=57.84 Aligned_cols=25 Identities=28% Similarity=0.473 Sum_probs=22.2
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhccC
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKPL 296 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~~ 296 (369)
+..++|.|+||+||||+++.+++..
T Consensus 44 ~~~vll~G~~G~GKT~l~~~~~~~~ 68 (387)
T 2v1u_A 44 PSNALLYGLTGTGKTAVARLVLRRL 68 (387)
T ss_dssp CCCEEECBCTTSSHHHHHHHHHHHH
T ss_pred CCcEEEECCCCCCHHHHHHHHHHHH
Confidence 4578999999999999999998765
No 314
>3b9p_A CG5977-PA, isoform A; AAA ATPase, ATP-binding, nucleotide-binding, hydrolase; 2.70A {Drosophila melanogaster}
Probab=96.56 E-value=0.0015 Score=60.59 Aligned_cols=34 Identities=18% Similarity=0.346 Sum_probs=27.3
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhccCCcE--EEeCCc
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKPLNYT--TVNRDT 305 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~~~~~--~i~~D~ 305 (369)
+.-|+|.|+||+||||+|+.++...+.. .++...
T Consensus 54 ~~~vll~Gp~GtGKT~la~~la~~~~~~~~~i~~~~ 89 (297)
T 3b9p_A 54 AKGLLLFGPPGNGKTLLARAVATECSATFLNISAAS 89 (297)
T ss_dssp CSEEEEESSSSSCHHHHHHHHHHHTTCEEEEEESTT
T ss_pred CCeEEEECcCCCCHHHHHHHHHHHhCCCeEEeeHHH
Confidence 4578999999999999999999988644 445443
No 315
>1l8q_A Chromosomal replication initiator protein DNAA; AAA+, helix-turn-helix, nucleotide-binding, DNA binding, REP initiation, DNA binding protein; HET: ADP; 2.70A {Aquifex aeolicus} SCOP: a.4.12.2 c.37.1.20 PDB: 3r8f_A* 2hcb_A*
Probab=96.55 E-value=0.0046 Score=58.13 Aligned_cols=59 Identities=14% Similarity=0.224 Sum_probs=37.5
Q ss_pred EEEEEEcCCCCcHHHHHHHHhccC-----CcEEEeCCcchh-HH-HH----HHHHHHHHhCCCcEEEeCC
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKPL-----NYTTVNRDTLGS-WQ-KC----VSVMKAALDSGLSVVVDNT 331 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~~-----~~~~i~~D~~~~-~~-~~----~~~~~~~l~~g~~vIiD~t 331 (369)
..++|.|+||+||||+++.++... .+.+++...+.. +. .+ .......+.....+++|..
T Consensus 38 ~~lll~G~~GtGKT~la~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vL~iDEi 107 (324)
T 1l8q_A 38 NPIFIYGSVGTGKTHLLQAAGNEAKKRGYRVIYSSADDFAQAMVEHLKKGTINEFRNMYKSVDLLLLDDV 107 (324)
T ss_dssp SSEEEECSSSSSHHHHHHHHHHHHHHTTCCEEEEEHHHHHHHHHHHHHHTCHHHHHHHHHTCSEEEEECG
T ss_pred CeEEEECCCCCcHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHcCcHHHHHHHhcCCCEEEEcCc
Confidence 457999999999999999998754 456676655421 11 01 1122233444567788875
No 316
>1jbk_A CLPB protein; beta barrel, chaperone; 1.80A {Escherichia coli} SCOP: c.37.1.20
Probab=96.54 E-value=0.0017 Score=54.98 Aligned_cols=26 Identities=23% Similarity=0.460 Sum_probs=22.5
Q ss_pred ccEEEEEEcCCCCcHHHHHHHHhccC
Q psy4598 271 LDSVLIMIGSQGSGKSSFVSTYLKPL 296 (369)
Q Consensus 271 ~~~lIll~G~pGSGKSTla~~L~~~~ 296 (369)
.+..++|.|+||+|||++++.+++.+
T Consensus 42 ~~~~~ll~G~~G~GKT~l~~~~~~~~ 67 (195)
T 1jbk_A 42 TKNNPVLIGEPGVGKTAIVEGLAQRI 67 (195)
T ss_dssp SSCEEEEECCTTSCHHHHHHHHHHHH
T ss_pred CCCceEEECCCCCCHHHHHHHHHHHH
Confidence 34668999999999999999998864
No 317
>2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A*
Probab=96.51 E-value=0.0016 Score=59.41 Aligned_cols=42 Identities=17% Similarity=0.339 Sum_probs=34.7
Q ss_pred CceEEEEecCCceeecCCCCCCCCCccccccccccHHHHHHHHHHCCcEEEEEec
Q psy4598 24 SAKIASFDLDGTLITTKSGKVFPVDTHDWKLLFSNIESVLKQYLDDGYKLVIFTN 78 (369)
Q Consensus 24 ~~k~~~fDlDgTLi~~~sg~~~~~~~~d~~~~~p~v~~~L~~L~~~G~~i~i~TN 78 (369)
+.|+++||+||||+.... .+-|...++|++|+++ ++++|+|-
T Consensus 12 ~~kli~~DlDGTLl~~~~------------~is~~~~~al~~l~~~-i~v~iaTG 53 (262)
T 2fue_A 12 ERVLCLFDVDGTLTPARQ------------KIDPEVAAFLQKLRSR-VQIGVVGG 53 (262)
T ss_dssp -CEEEEEESBTTTBSTTS------------CCCHHHHHHHHHHTTT-SEEEEECS
T ss_pred CeEEEEEeCccCCCCCCC------------cCCHHHHHHHHHHHhC-CEEEEEcC
Confidence 469999999999996531 1467899999999988 99999995
No 318
>3uk6_A RUVB-like 2; hexameric AAA+ ATP-ASE, DNA unwinding, hydrolase; HET: ADP; 2.95A {Homo sapiens} PDB: 2xsz_D*
Probab=96.49 E-value=0.0053 Score=58.48 Aligned_cols=25 Identities=20% Similarity=0.490 Sum_probs=22.6
Q ss_pred EEEEEEcCCCCcHHHHHHHHhccCC
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKPLN 297 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~~~ 297 (369)
..++|.|+||+|||++|+.+++.++
T Consensus 71 ~~vLl~GppGtGKT~la~~la~~l~ 95 (368)
T 3uk6_A 71 RAVLIAGQPGTGKTAIAMGMAQALG 95 (368)
T ss_dssp CEEEEEESTTSSHHHHHHHHHHHHC
T ss_pred CEEEEECCCCCCHHHHHHHHHHHhc
Confidence 5789999999999999999998754
No 319
>1d2n_A N-ethylmaleimide-sensitive fusion protein; hexamerization domain, ATPase, transport; HET: ANP; 1.75A {Cricetulus griseus} SCOP: c.37.1.20 PDB: 1nsf_A*
Probab=96.48 E-value=0.0016 Score=59.64 Aligned_cols=32 Identities=16% Similarity=0.243 Sum_probs=26.2
Q ss_pred ccccEEEEEEcCCCCcHHHHHHHHhccCCcEE
Q psy4598 269 AALDSVLIMIGSQGSGKSSFVSTYLKPLNYTT 300 (369)
Q Consensus 269 ~~~~~lIll~G~pGSGKSTla~~L~~~~~~~~ 300 (369)
...+.-++|.|+||+|||++|+++++..+..+
T Consensus 61 ~~~~~~vLl~G~~GtGKT~la~~ia~~~~~~~ 92 (272)
T 1d2n_A 61 RTPLVSVLLEGPPHSGKTALAAKIAEESNFPF 92 (272)
T ss_dssp SCSEEEEEEECSTTSSHHHHHHHHHHHHTCSE
T ss_pred CCCCeEEEEECCCCCcHHHHHHHHHHHhCCCE
Confidence 34457899999999999999999999865443
No 320
>2x8a_A Nuclear valosin-containing protein-like; nuclear protein; 2.60A {Homo sapiens}
Probab=96.47 E-value=0.0017 Score=60.20 Aligned_cols=32 Identities=19% Similarity=0.373 Sum_probs=25.6
Q ss_pred EEEEcCCCCcHHHHHHHHhccCCc--EEEeCCcc
Q psy4598 275 LIMIGSQGSGKSSFVSTYLKPLNY--TTVNRDTL 306 (369)
Q Consensus 275 Ill~G~pGSGKSTla~~L~~~~~~--~~i~~D~~ 306 (369)
++|.|||||||||+++.++...+. ..++...+
T Consensus 47 vlL~Gp~GtGKTtLakala~~~~~~~i~i~g~~l 80 (274)
T 2x8a_A 47 VLLAGPPGCGKTLLAKAVANESGLNFISVKGPEL 80 (274)
T ss_dssp EEEESSTTSCHHHHHHHHHHHTTCEEEEEETTTT
T ss_pred EEEECCCCCcHHHHHHHHHHHcCCCEEEEEcHHH
Confidence 899999999999999999987653 44554443
No 321
>1jr3_A DNA polymerase III subunit gamma; processivity, processivity clamp, clamp loader, AAA+ ATPase, transferase; HET: DNA; 2.70A {Escherichia coli} SCOP: a.80.1.1 c.37.1.20 PDB: 1xxh_B* 3glh_B* 3glf_B* 3gli_B* 3glg_B* 1xxi_B*
Probab=96.46 E-value=0.0049 Score=58.66 Aligned_cols=88 Identities=13% Similarity=0.155 Sum_probs=51.3
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhccCCc--------------------------EEEeCCc---chhHHHHHHHHHHHH--
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKPLNY--------------------------TTVNRDT---LGSWQKCVSVMKAAL-- 320 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~~~~--------------------------~~i~~D~---~~~~~~~~~~~~~~l-- 320 (369)
+..+++.|+||+||||+++.+++.+++ ..++... ....+.+...+....
T Consensus 38 ~~~~ll~G~~G~GKT~la~~la~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 117 (373)
T 1jr3_A 38 HHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPAR 117 (373)
T ss_dssp CSEEEEESCTTSSHHHHHHHHHHHHSCTTCSCSSCCSSSHHHHHHHTSCCSSCEEEETTCSCCSSCHHHHHHHTTSCCSS
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhccCCCceEEecccccCCHHHHHHHHHHHhhcccc
Confidence 457899999999999999999876432 2222211 111222222221111
Q ss_pred hCCCcEEEeCC-CCCHHHHHHHHHHHHhcCCeEEEEEEeC
Q psy4598 321 DSGLSVVVDNT-NPDKESRHRYIEAAKQHGVRCIAVHMNI 359 (369)
Q Consensus 321 ~~g~~vIiD~t-n~~~~~r~~~~~la~~~~~~v~~v~l~~ 359 (369)
.....+|||.. ..+......+.+...+....+.++....
T Consensus 118 ~~~~vliiDe~~~l~~~~~~~Ll~~le~~~~~~~~Il~~~ 157 (373)
T 1jr3_A 118 GRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATT 157 (373)
T ss_dssp SSSEEEEEECGGGSCHHHHHHHHHHHHSCCSSEEEEEEES
T ss_pred CCeEEEEEECcchhcHHHHHHHHHHHhcCCCceEEEEEeC
Confidence 12346778865 3466677778777776555565555543
No 322
>2qby_B CDC6 homolog 3, cell division control protein 6 homolog 3; winged-helix domain, helix-turn-helix, AAA+ ATPase domain, protein-DNA complex; HET: DNA SPD ADP; 3.35A {Sulfolobus solfataricus}
Probab=96.44 E-value=0.0029 Score=60.52 Aligned_cols=26 Identities=15% Similarity=0.328 Sum_probs=22.7
Q ss_pred ccEEEEEEcCCCCcHHHHHHHHhccC
Q psy4598 271 LDSVLIMIGSQGSGKSSFVSTYLKPL 296 (369)
Q Consensus 271 ~~~lIll~G~pGSGKSTla~~L~~~~ 296 (369)
.+..++|.|+||+||||+++.+++..
T Consensus 44 ~~~~vll~G~~G~GKT~la~~l~~~~ 69 (384)
T 2qby_B 44 VKFSNLFLGLTGTGKTFVSKYIFNEI 69 (384)
T ss_dssp CCCEEEEEECTTSSHHHHHHHHHHHH
T ss_pred CCCcEEEECCCCCCHHHHHHHHHHHH
Confidence 34689999999999999999998754
No 323
>1p6x_A Thymidine kinase; P-loop, LID, transferase; HET: THM; 2.00A {Equid herpesvirus 4} SCOP: c.37.1.1 PDB: 1p72_A* 1p73_A* 1p75_A*
Probab=96.44 E-value=0.0059 Score=58.25 Aligned_cols=26 Identities=19% Similarity=0.124 Sum_probs=23.6
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhccCC
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKPLN 297 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~~~ 297 (369)
..+|.+-|+-||||||+++.|++.++
T Consensus 7 ~~fI~~EG~dGaGKTT~~~~La~~L~ 32 (334)
T 1p6x_A 7 IVRIYLDGVYGIGKSTTGRVMASAAS 32 (334)
T ss_dssp EEEEEEECSTTSSHHHHHHHHHSGGG
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHhc
Confidence 47999999999999999999999863
No 324
>1sxj_C Activator 1 40 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=96.43 E-value=0.0072 Score=57.26 Aligned_cols=82 Identities=11% Similarity=0.121 Sum_probs=46.5
Q ss_pred EEEEcCCCCcHHHHHHHHhccCC-------cEEEeCCcchhHHHHHHHHHHHHh-------CCCcEEEeCC-CCCHHHHH
Q psy4598 275 LIMIGSQGSGKSSFVSTYLKPLN-------YTTVNRDTLGSWQKCVSVMKAALD-------SGLSVVVDNT-NPDKESRH 339 (369)
Q Consensus 275 Ill~G~pGSGKSTla~~L~~~~~-------~~~i~~D~~~~~~~~~~~~~~~l~-------~g~~vIiD~t-n~~~~~r~ 339 (369)
+++.||||+||||+++.+++.+. +..++...........+.+....+ ..+.+|+|.. ..+.....
T Consensus 49 ~ll~Gp~G~GKTtla~~la~~l~~~~~~~~~~~~~~~~~~~~~~ir~~i~~~~~~~~~~~~~~~viiiDe~~~l~~~~~~ 128 (340)
T 1sxj_C 49 LLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFASTRQIFSKGFKLIILDEADAMTNAAQN 128 (340)
T ss_dssp EEEECSSSSSHHHHHHHHHHHHHTTSHHHHEEEECTTSCCSHHHHHTHHHHHHHBCCSSSCSCEEEEETTGGGSCHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHHcCCCccceEEEEcCcccccHHHHHHHHHHHHhhcccCCCCceEEEEeCCCCCCHHHHH
Confidence 79999999999999999998641 233333222222222222222221 1345677754 34566666
Q ss_pred HHHHHHHhcCCeEEEEE
Q psy4598 340 RYIEAAKQHGVRCIAVH 356 (369)
Q Consensus 340 ~~~~la~~~~~~v~~v~ 356 (369)
.+.....+..-.+.++.
T Consensus 129 ~L~~~le~~~~~~~~il 145 (340)
T 1sxj_C 129 ALRRVIERYTKNTRFCV 145 (340)
T ss_dssp HHHHHHHHTTTTEEEEE
T ss_pred HHHHHHhcCCCCeEEEE
Confidence 77776665544344433
No 325
>1j8m_F SRP54, signal recognition 54 kDa protein; signaling protein; 2.00A {Acidianus ambivalens} SCOP: a.24.13.1 c.37.1.10 PDB: 1j8y_F
Probab=96.42 E-value=0.015 Score=54.52 Aligned_cols=36 Identities=22% Similarity=0.341 Sum_probs=29.2
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhccC-----CcEEEeCCcch
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKPL-----NYTTVNRDTLG 307 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~~-----~~~~i~~D~~~ 307 (369)
+.+|+++|++|+||||++..|+..+ ...+++.|..+
T Consensus 98 ~~vi~i~G~~G~GKTT~~~~la~~~~~~g~~v~l~~~D~~r 138 (297)
T 1j8m_F 98 PYVIMLVGVQGTGKTTTAGKLAYFYKKKGFKVGLVGADVYR 138 (297)
T ss_dssp SEEEEEECSSCSSTTHHHHHHHHHHHHTTCCEEEEECCCSS
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEecCCCC
Confidence 4678889999999999999998643 56778888654
No 326
>3lda_A DNA repair protein RAD51; DNA binding protein, ATP-binding, DNA damage, DNA recombinat repair, nucleotide-binding; HET: DNA; 2.50A {Saccharomyces cerevisiae} PDB: 1szp_A*
Probab=96.39 E-value=0.013 Score=57.24 Aligned_cols=33 Identities=18% Similarity=0.233 Sum_probs=25.5
Q ss_pred EEEEEEcCCCCcHHHHHHHHhcc-----------CCcEEEeCCc
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKP-----------LNYTTVNRDT 305 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~-----------~~~~~i~~D~ 305 (369)
.++.|+|+||||||||+..++-. .+..+++...
T Consensus 179 ei~~I~G~sGsGKTTLl~~la~~~~~p~~~Gg~~~~viyid~E~ 222 (400)
T 3lda_A 179 SITELFGEFRTGKSQLCHTLAVTCQIPLDIGGGEGKCLYIDTEG 222 (400)
T ss_dssp SEEEEEESTTSSHHHHHHHHHHHTTSCGGGTCCSSEEEEEESSS
T ss_pred cEEEEEcCCCCChHHHHHHHHHHhccCcccCCCCCcEEEEeCCC
Confidence 68999999999999999977521 2367777654
No 327
>3eie_A Vacuolar protein sorting-associated protein 4; AAA ATPase, ATP-binding cassette, ATP-binding, endosome, MEM nucleotide-binding; 2.70A {Saccharomyces cerevisiae} PDB: 3eih_A* 2rko_A 3mhv_C
Probab=96.39 E-value=0.0018 Score=61.20 Aligned_cols=31 Identities=26% Similarity=0.364 Sum_probs=25.9
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhccCCcEEEe
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKPLNYTTVN 302 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~~~~~~i~ 302 (369)
+.-|+|.|+||+|||++|++++...+..++.
T Consensus 51 ~~~vLl~GppGtGKT~la~aia~~~~~~~~~ 81 (322)
T 3eie_A 51 TSGILLYGPPGTGKSYLAKAVATEANSTFFS 81 (322)
T ss_dssp CCEEEEECSSSSCHHHHHHHHHHHHTCEEEE
T ss_pred CCeEEEECCCCCcHHHHHHHHHHHHCCCEEE
Confidence 4568999999999999999999987655443
No 328
>3cf2_A TER ATPase, transitional endoplasmic reticulum ATPase, valosi; AAA, CDC48, ERAD, transport protein; HET: ADP ANP; 3.50A {Mus musculus} PDB: 3cf1_A* 3cf3_A* 1r7r_A*
Probab=96.38 E-value=0.0058 Score=64.88 Aligned_cols=35 Identities=11% Similarity=0.133 Sum_probs=29.6
Q ss_pred cccEEEEEEcCCCCcHHHHHHHHhccCCcEEEeCC
Q psy4598 270 ALDSVLIMIGSQGSGKSSFVSTYLKPLNYTTVNRD 304 (369)
Q Consensus 270 ~~~~lIll~G~pGSGKSTla~~L~~~~~~~~i~~D 304 (369)
..|+=|+|.||||+|||++|++++..+++.++..+
T Consensus 236 ~~p~GILL~GPPGTGKT~LAraiA~elg~~~~~v~ 270 (806)
T 3cf2_A 236 KPPRGILLYGPPGTGKTLIARAVANETGAFFFLIN 270 (806)
T ss_dssp CCCCEEEEECCTTSCHHHHHHHHHTTTTCEEEEEE
T ss_pred CCCCeEEEECCCCCCHHHHHHHHHHHhCCeEEEEE
Confidence 45678999999999999999999999887666543
No 329
>3hws_A ATP-dependent CLP protease ATP-binding subunit CL; CLPXP, AAA+ molecular machine, hexamer, asymmetric,, ATP-BIN chaperone, metal-binding; HET: ADP; 3.25A {Escherichia coli} PDB: 3hte_A
Probab=96.37 E-value=0.0015 Score=62.64 Aligned_cols=32 Identities=28% Similarity=0.440 Sum_probs=26.5
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhccCCcEEEeC
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKPLNYTTVNR 303 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~~~~~~i~~ 303 (369)
+.-|+|.||||+|||++|+.+++.++..++..
T Consensus 51 ~~~vll~GppGtGKT~la~~ia~~~~~~~~~~ 82 (363)
T 3hws_A 51 KSNILLIGPTGSGKTLLAETLARLLDVPFTMA 82 (363)
T ss_dssp CCCEEEECCTTSSHHHHHHHHHHHTTCCEEEE
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHcCCCEEEe
Confidence 35689999999999999999999886555543
No 330
>3tqf_A HPR(Ser) kinase; transferase, hydrolase; 2.80A {Coxiella burnetii}
Probab=96.34 E-value=0.0026 Score=55.03 Aligned_cols=33 Identities=18% Similarity=0.272 Sum_probs=27.6
Q ss_pred EEEEEEcCCCCcHHHHHHHHhccCCcEEEeCCcc
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTL 306 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~~~~~~i~~D~~ 306 (369)
.-|+++|+||+||||+|.+|.++ ++.+++-|..
T Consensus 17 ~gvli~G~SGaGKStlal~L~~r-G~~lvaDD~v 49 (181)
T 3tqf_A 17 MGVLITGEANIGKSELSLALIDR-GHQLVCDDVI 49 (181)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHT-TCEEEESSEE
T ss_pred EEEEEEcCCCCCHHHHHHHHHHc-CCeEecCCEE
Confidence 46899999999999999999985 6677776654
No 331
>1g41_A Heat shock protein HSLU; AAA-ATPase, CLPY, ATP-dependent proteolysis, chaperone; HET: ADP; 2.30A {Haemophilus influenzae} SCOP: c.37.1.20 PDB: 1g3i_A* 1im2_A* 1kyi_A* 1g4a_E* 1g4b_E 1yyf_A* 1do0_A* 1do2_A* 1e94_E* 1hqy_E* 1ht1_E* 1ht2_E*
Probab=96.33 E-value=0.0016 Score=64.53 Aligned_cols=33 Identities=24% Similarity=0.390 Sum_probs=27.4
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhccCCcEEEeCC
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKPLNYTTVNRD 304 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~~~~~~i~~D 304 (369)
+.-|+|.||||+||||+|+++++.+++.++..|
T Consensus 50 ~~~iLl~GppGtGKT~lar~lA~~l~~~~~~v~ 82 (444)
T 1g41_A 50 PKNILMIGPTGVGKTEIARRLAKLANAPFIKVE 82 (444)
T ss_dssp CCCEEEECCTTSSHHHHHHHHHHHTTCCEEEEE
T ss_pred CceEEEEcCCCCCHHHHHHHHHHHcCCCceeec
Confidence 345899999999999999999999876665543
No 332
>2ffh_A Protein (FFH); SRP54, signal recognition particle, GTPase, M domain, RNA-binding, signal sequence-binding, helix-turn-helix, protein targeting; 3.20A {Thermus aquaticus} SCOP: a.24.13.1 a.36.1.1 c.37.1.10 PDB: 2iy3_A
Probab=96.33 E-value=0.022 Score=56.16 Aligned_cols=36 Identities=25% Similarity=0.296 Sum_probs=29.3
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhccC-----CcEEEeCCcch
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKPL-----NYTTVNRDTLG 307 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~~-----~~~~i~~D~~~ 307 (369)
+.+|+++|++||||||++..|+..+ .+.+++.|..+
T Consensus 98 ~~vi~i~G~~GsGKTT~~~~LA~~l~~~g~~Vllvd~D~~r 138 (425)
T 2ffh_A 98 RNLWFLVGLQGSGKTTTAAKLALYYKGKGRRPLLVAADTQR 138 (425)
T ss_dssp SEEEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEEECCSSC
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEeeccccC
Confidence 4678889999999999999998643 46778888764
No 333
>1in4_A RUVB, holliday junction DNA helicase RUVB; AAA+-class ATPase, winged-helix domain, ATP hydrolysis, walker A, walker B, sensor 1, sensor 2; HET: ADP; 1.60A {Thermotoga maritima} SCOP: a.4.5.11 c.37.1.20 PDB: 1in5_A* 1in6_A* 1in8_A* 1in7_A* 1j7k_A*
Probab=96.32 E-value=0.0051 Score=58.37 Aligned_cols=69 Identities=14% Similarity=0.239 Sum_probs=39.7
Q ss_pred EEEEEEcCCCCcHHHHHHHHhccCCc--EEEeCCcchhHHHHHHHHHHHHhCCCcEEEeCCC-CCHHHHHHHH
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKPLNY--TTVNRDTLGSWQKCVSVMKAALDSGLSVVVDNTN-PDKESRHRYI 342 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~~~~--~~i~~D~~~~~~~~~~~~~~~l~~g~~vIiD~tn-~~~~~r~~~~ 342 (369)
..++|.||||+||||+++.++..++. ...+...+..-..+.. ....+..+..++||... +.....+.+.
T Consensus 52 ~~~ll~Gp~G~GKTTLa~~ia~~l~~~~~~~sg~~~~~~~~l~~-~~~~~~~~~v~~iDE~~~l~~~~~e~L~ 123 (334)
T 1in4_A 52 DHVLLAGPPGLGKTTLAHIIASELQTNIHVTSGPVLVKQGDMAA-ILTSLERGDVLFIDEIHRLNKAVEELLY 123 (334)
T ss_dssp CCEEEESSTTSSHHHHHHHHHHHHTCCEEEEETTTCCSHHHHHH-HHHHCCTTCEEEEETGGGCCHHHHHHHH
T ss_pred CeEEEECCCCCcHHHHHHHHHHHhCCCEEEEechHhcCHHHHHH-HHHHccCCCEEEEcchhhcCHHHHHHHH
Confidence 56899999999999999999988754 3344444321112111 11223345566777543 3443334343
No 334
>2dyk_A GTP-binding protein; GTPase, ribosome-binding protein, structural genomics; HET: GDP; 1.96A {Thermus thermophilus}
Probab=96.31 E-value=0.022 Score=46.70 Aligned_cols=88 Identities=22% Similarity=0.252 Sum_probs=50.9
Q ss_pred EEEEEcCCCCcHHHHHHHHhccCC--------------cEEEeCCc--c--------hh----HHHHHHHHHHHHhCCC-
Q psy4598 274 VLIMIGSQGSGKSSFVSTYLKPLN--------------YTTVNRDT--L--------GS----WQKCVSVMKAALDSGL- 324 (369)
Q Consensus 274 lIll~G~pGSGKSTla~~L~~~~~--------------~~~i~~D~--~--------~~----~~~~~~~~~~~l~~g~- 324 (369)
-|+++|.+|+||||+.+++..... ...+..+. + .. ...........+....
T Consensus 3 ki~v~G~~~~GKSsli~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dt~G~~~~~~~~~~~~~~~~~~~~~~~~ 82 (161)
T 2dyk_A 3 KVVIVGRPNVGKSSLFNRLLKKRSAVVADVPGVTRDLKEGVVETDRGRFLLVDTGGLWSGDKWEKKIQEKVDRALEDAEV 82 (161)
T ss_dssp EEEEECCTTSSHHHHHHHHHHCCC-----------CCEEEEEEETTEEEEEEECGGGCSSSSCCHHHHHHHHHHTTTCSE
T ss_pred EEEEECCCCCCHHHHHHHHhCCCeeeccCCCCceecceEEEEEeCCceEEEEECCCCCCccchHHHHHHHHHHHHHhCCE
Confidence 478999999999999999976421 00111111 0 01 1223333444444333
Q ss_pred -cEEEeCCCCCHHHHHHHHHHHHhcCCeEEEEEEeCCH
Q psy4598 325 -SVVVDNTNPDKESRHRYIEAAKQHGVRCIAVHMNISK 361 (369)
Q Consensus 325 -~vIiD~tn~~~~~r~~~~~la~~~~~~v~~v~l~~~~ 361 (369)
.+|+|.++........+.+..+..+.++.++.-.++.
T Consensus 83 ~i~v~d~~~~~~~~~~~~~~~~~~~~~p~ilv~nK~Dl 120 (161)
T 2dyk_A 83 VLFAVDGRAELTQADYEVAEYLRRKGKPVILVATKVDD 120 (161)
T ss_dssp EEEEEESSSCCCHHHHHHHHHHHHHTCCEEEEEECCCS
T ss_pred EEEEEECCCcccHhHHHHHHHHHhcCCCEEEEEECccc
Confidence 4568888754444455666666678888777766665
No 335
>3rlf_A Maltose/maltodextrin import ATP-binding protein M; integral membrane protein, ATPase, ABC transporter, membrane transmembrane; HET: UMQ MAL PGV ANP; 2.20A {Escherichia coli} PDB: 1q1e_A 1q12_A* 2awo_A* 3fh6_A 3puv_A* 3puw_A* 3pux_A* 3puy_A* 3puz_A* 3pv0_A* 2awn_A* 2r6g_A* 1q1b_A
Probab=96.29 E-value=0.018 Score=55.97 Aligned_cols=51 Identities=14% Similarity=0.140 Sum_probs=32.4
Q ss_pred HHHHHHHHhCCCcEEEeC--CCCCHHHHHHHHHHHH----hcCCeEEEEEEeCCHHHHH
Q psy4598 313 VSVMKAALDSGLSVVVDN--TNPDKESRHRYIEAAK----QHGVRCIAVHMNISKEHAK 365 (369)
Q Consensus 313 ~~~~~~~l~~g~~vIiD~--tn~~~~~r~~~~~la~----~~~~~v~~v~l~~~~e~~~ 365 (369)
...++..+..-..+++|= ++++...|..+++..+ +.|. .++++.=+.+++.
T Consensus 142 VaiArAL~~~P~lLLLDEPts~LD~~~~~~l~~~l~~l~~~~g~--tii~vTHd~~ea~ 198 (381)
T 3rlf_A 142 VAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGR--TMIYVTHDQVEAM 198 (381)
T ss_dssp HHHHHHHHHCCSEEEEESTTTTSCHHHHHHHHHHHHHHHHHHCC--EEEEECSCHHHHH
T ss_pred HHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHhCCC--EEEEEECCHHHHH
Confidence 445566666777889994 5678887777765544 3455 4566666665554
No 336
>1xwi_A SKD1 protein; VPS4B, AAA ATPase, protein transport; 2.80A {Homo sapiens}
Probab=96.29 E-value=0.0024 Score=60.49 Aligned_cols=34 Identities=18% Similarity=0.297 Sum_probs=26.7
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhccC-Cc--EEEeCCc
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKPL-NY--TTVNRDT 305 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~~-~~--~~i~~D~ 305 (369)
+.-|+|.||||+|||++|++++... +. ..++...
T Consensus 45 ~~~iLL~GppGtGKT~la~ala~~~~~~~~~~i~~~~ 81 (322)
T 1xwi_A 45 WRGILLFGPPGTGKSYLAKAVATEANNSTFFSISSSD 81 (322)
T ss_dssp CSEEEEESSSSSCHHHHHHHHHHHTTSCEEEEEECCS
T ss_pred CceEEEECCCCccHHHHHHHHHHHcCCCcEEEEEhHH
Confidence 3578999999999999999999876 43 4455443
No 337
>1zu4_A FTSY; GTPase, signal recognition particle, SRP, receptor, protein transport; 1.95A {Mycoplasma mycoides} PDB: 1zu5_A
Probab=96.27 E-value=0.018 Score=54.53 Aligned_cols=37 Identities=16% Similarity=0.336 Sum_probs=29.7
Q ss_pred ccEEEEEEcCCCCcHHHHHHHHhccC-----CcEEEeCCcch
Q psy4598 271 LDSVLIMIGSQGSGKSSFVSTYLKPL-----NYTTVNRDTLG 307 (369)
Q Consensus 271 ~~~lIll~G~pGSGKSTla~~L~~~~-----~~~~i~~D~~~ 307 (369)
.+.+|+++|++|+||||++..|+..+ .+.+++.|..+
T Consensus 104 ~~~vI~ivG~~G~GKTT~~~~LA~~l~~~g~kVllid~D~~r 145 (320)
T 1zu4_A 104 RLNIFMLVGVNGTGKTTSLAKMANYYAELGYKVLIAAADTFR 145 (320)
T ss_dssp SCEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEECCCSC
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCcc
Confidence 35789999999999999999998643 46677888754
No 338
>2zr9_A Protein RECA, recombinase A; recombination, RECA mutants, DNA-repair, ATP-binding, DNA DA recombination, DNA repair, DNA-binding; HET: DTP; 2.50A {Mycobacterium smegmatis str} PDB: 2zr0_A* 2zra_A* 2zrb_A 2zrm_A* 1ubc_A* 1ubf_A* 1ubg_A* 1ube_A* 2g88_A* 2odw_A* 2oe2_A 2oep_A* 2oes_A 2ofo_A 2zr7_A 2odn_A* 2zrn_A 2zro_A* 2zrp_A* 2zre_A* ...
Probab=96.25 E-value=0.014 Score=56.03 Aligned_cols=33 Identities=15% Similarity=0.218 Sum_probs=26.6
Q ss_pred EEEEEEcCCCCcHHHHHHHHhcc-----CCcEEEeCCc
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKP-----LNYTTVNRDT 305 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~-----~~~~~i~~D~ 305 (369)
.++++.|+|||||||++..++.. ..+.+++.+.
T Consensus 62 ~iv~I~G~pGsGKTtLal~la~~~~~~g~~vlyi~~E~ 99 (349)
T 2zr9_A 62 RVIEIYGPESSGKTTVALHAVANAQAAGGIAAFIDAEH 99 (349)
T ss_dssp SEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHHhCCCeEEEEECCC
Confidence 58899999999999999998753 2567777654
No 339
>3pqc_A Probable GTP-binding protein ENGB; rossmann fold, GTPase, cell cycle, hydrolase; HET: GDP; 1.90A {Thermotoga maritima} PDB: 3pr1_A
Probab=96.25 E-value=0.023 Score=48.20 Aligned_cols=89 Identities=18% Similarity=0.250 Sum_probs=49.3
Q ss_pred EEEEEEcCCCCcHHHHHHHHhccC---------------------CcEEEeCCcch-------hHHHHHHHHHHHHhC--
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKPL---------------------NYTTVNRDTLG-------SWQKCVSVMKAALDS-- 322 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~~---------------------~~~~i~~D~~~-------~~~~~~~~~~~~l~~-- 322 (369)
.-|+++|.+|+||||+..++.... ...+++.--+. ............+..
T Consensus 24 ~~i~v~G~~~~GKSsli~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~i~Dt~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (195)
T 3pqc_A 24 GEVAFVGRSNVGKSSLLNALFNRKIAFVSKTPGKTRSINFYLVNSKYYFVDLPGYGYAKVSKKERMLWKRLVEDYFKNRW 103 (195)
T ss_dssp CEEEEEEBTTSSHHHHHHHHHTSCCSCCCSSCCCCCCEEEEEETTTEEEEECCCBSSSCCCHHHHHHHHHHHHHHHHHCT
T ss_pred eEEEEECCCCCCHHHHHHHHHcCccccccCCCCCccCeEEEEECCcEEEEECCCCccccCChhhHHHHHHHHHHHHhcCc
Confidence 468899999999999999997642 01122221110 011122222222322
Q ss_pred ---CCcEEEeCCCCCHHHHHHHHHHHHhcCCeEEEEEEeCCH
Q psy4598 323 ---GLSVVVDNTNPDKESRHRYIEAAKQHGVRCIAVHMNISK 361 (369)
Q Consensus 323 ---g~~vIiD~tn~~~~~r~~~~~la~~~~~~v~~v~l~~~~ 361 (369)
...+|+|.+.........+....+..+.++.++.-.++.
T Consensus 104 ~~~~vi~v~d~~~~~~~~~~~~~~~~~~~~~p~i~v~nK~Dl 145 (195)
T 3pqc_A 104 SLQMVFLLVDGRIPPQDSDLMMVEWMKSLNIPFTIVLTKMDK 145 (195)
T ss_dssp TEEEEEEEEETTSCCCHHHHHHHHHHHHTTCCEEEEEECGGG
T ss_pred CceEEEEEecCCCCCCHHHHHHHHHHHHcCCCEEEEEEChhc
Confidence 224457876654444445566667778888777665553
No 340
>2dr3_A UPF0273 protein PH0284; RECA superfamily ATPase, hexamer, structural genomics; HET: ADP; 2.00A {Pyrococcus horikoshii}
Probab=96.24 E-value=0.02 Score=50.86 Aligned_cols=33 Identities=24% Similarity=0.390 Sum_probs=25.7
Q ss_pred EEEEEEcCCCCcHHHHHHHHhcc-----CCcEEEeCCc
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKP-----LNYTTVNRDT 305 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~-----~~~~~i~~D~ 305 (369)
.++++.|+|||||||++..++.. .++.+++.+.
T Consensus 24 ~~~~i~G~~GsGKTtl~~~~~~~~~~~~~~v~~~~~e~ 61 (247)
T 2dr3_A 24 NVVLLSGGPGTGKTIFSQQFLWNGLKMGEPGIYVALEE 61 (247)
T ss_dssp CEEEEEECTTSSHHHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred cEEEEECCCCCCHHHHHHHHHHHHHhcCCeEEEEEccC
Confidence 58899999999999999888643 2566666554
No 341
>3b9q_A Chloroplast SRP receptor homolog, alpha subunit CPFTSY; protein translocation, GTP-binding, nucleotide-binding, protein transport; 1.75A {Arabidopsis thaliana}
Probab=96.22 E-value=0.024 Score=53.13 Aligned_cols=37 Identities=22% Similarity=0.408 Sum_probs=27.7
Q ss_pred ccEEEEEEcCCCCcHHHHHHHHhccC----C-cEEEeCCcch
Q psy4598 271 LDSVLIMIGSQGSGKSSFVSTYLKPL----N-YTTVNRDTLG 307 (369)
Q Consensus 271 ~~~lIll~G~pGSGKSTla~~L~~~~----~-~~~i~~D~~~ 307 (369)
.+.++.|+|++||||||+.+.|+..+ + +.+...|..+
T Consensus 99 ~g~vi~lvG~nGsGKTTll~~Lag~l~~~~g~V~l~g~d~~r 140 (302)
T 3b9q_A 99 KPAVIMIVGVNGGGKTTSLGKLAHRLKNEGTKVLMAAGDTFR 140 (302)
T ss_dssp SCEEEEEECCTTSCHHHHHHHHHHHHHHTTCCEEEECCCCSC
T ss_pred CCcEEEEEcCCCCCHHHHHHHHHHHHHHcCCeEEEEeecccc
Confidence 35789999999999999999998653 3 3444556543
No 342
>1ixz_A ATP-dependent metalloprotease FTSH; AAA domain fold, hydrolase; 2.20A {Thermus thermophilus} SCOP: c.37.1.20 PDB: 1iy0_A* 1iy1_A*
Probab=96.21 E-value=0.0022 Score=58.07 Aligned_cols=30 Identities=17% Similarity=0.395 Sum_probs=24.3
Q ss_pred EEEEEcCCCCcHHHHHHHHhccCC--cEEEeC
Q psy4598 274 VLIMIGSQGSGKSSFVSTYLKPLN--YTTVNR 303 (369)
Q Consensus 274 lIll~G~pGSGKSTla~~L~~~~~--~~~i~~ 303 (369)
=++|.|+|||||||+++.++...+ ...++.
T Consensus 51 g~ll~G~~G~GKTtl~~~i~~~~~~~~i~~~~ 82 (254)
T 1ixz_A 51 GVLLVGPPGVGKTHLARAVAGEARVPFITASG 82 (254)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHTTCCEEEEEH
T ss_pred eEEEECCCCCCHHHHHHHHHHHhCCCEEEeeH
Confidence 389999999999999999998764 444443
No 343
>2xxa_A Signal recognition particle protein; protein transport, RNA/RNA binding protein, hydrolase, gtpas; HET: GCP; 3.94A {Escherichia coli} PDB: 2j28_9
Probab=96.19 E-value=0.021 Score=56.32 Aligned_cols=37 Identities=30% Similarity=0.336 Sum_probs=30.2
Q ss_pred ccEEEEEEcCCCCcHHHHHHHHhcc------CCcEEEeCCcch
Q psy4598 271 LDSVLIMIGSQGSGKSSFVSTYLKP------LNYTTVNRDTLG 307 (369)
Q Consensus 271 ~~~lIll~G~pGSGKSTla~~L~~~------~~~~~i~~D~~~ 307 (369)
.|.+|+++|++|+||||++..|+.. ..+.+++.|..+
T Consensus 99 ~~~vI~ivG~~GvGKTT~a~~LA~~l~~~~G~kVllvd~D~~r 141 (433)
T 2xxa_A 99 PPAVVLMAGLQGAGKTTSVGKLGKFLREKHKKKVLVVSADVYR 141 (433)
T ss_dssp SSEEEEEECSTTSSHHHHHHHHHHHHHHTSCCCEEEEECCCSS
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHHHhcCCeEEEEecCCCC
Confidence 3578899999999999999999843 357788999764
No 344
>3te6_A Regulatory protein SIR3; heterochromatin, gene silencing, SIR complex, HMR, HML, TELO AAA+ domain, structural, nucleus, gene RE; 2.80A {Saccharomyces cerevisiae}
Probab=96.19 E-value=0.011 Score=56.09 Aligned_cols=28 Identities=14% Similarity=0.288 Sum_probs=23.9
Q ss_pred ccccEEEEEEcCCCCcHHHHHHHHhccC
Q psy4598 269 AALDSVLIMIGSQGSGKSSFVSTYLKPL 296 (369)
Q Consensus 269 ~~~~~lIll~G~pGSGKSTla~~L~~~~ 296 (369)
...+..+++.|+||+|||++++.+++.+
T Consensus 42 ~~~~~~lli~GpPGTGKT~~v~~v~~~L 69 (318)
T 3te6_A 42 SSQNKLFYITNADDSTKFQLVNDVMDEL 69 (318)
T ss_dssp TTCCCEEEEECCCSHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEECCCCCCHHHHHHHHHHHH
Confidence 3456788999999999999999998764
No 345
>1lvg_A Guanylate kinase, GMP kinase; transferase; HET: ADP 5GP; 2.10A {Mus musculus} SCOP: c.37.1.1
Probab=96.17 E-value=0.0021 Score=56.42 Aligned_cols=23 Identities=22% Similarity=0.570 Sum_probs=20.5
Q ss_pred EEEEEEcCCCCcHHHHHHHHhcc
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKP 295 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~ 295 (369)
.++.|+||+||||||+.+.|...
T Consensus 5 ~~i~lvGpsGaGKSTLl~~L~~~ 27 (198)
T 1lvg_A 5 RPVVLSGPSGAGKSTLLKKLFQE 27 (198)
T ss_dssp CCEEEECCTTSSHHHHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHhh
Confidence 57899999999999999999753
No 346
>2v3c_C SRP54, signal recognition 54 kDa protein; nucleotide-binding, signal recognition particle, GTP-binding, RNA-binding; 2.50A {Methanocaldococcus jannaschii} PDB: 3ndb_B
Probab=96.17 E-value=0.0049 Score=60.94 Aligned_cols=35 Identities=26% Similarity=0.501 Sum_probs=29.2
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhccC-----CcEEEeCCcc
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKPL-----NYTTVNRDTL 306 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~~-----~~~~i~~D~~ 306 (369)
+.+|+++|+||+||||++..|+..+ .+.+++.|..
T Consensus 99 ~~vI~ivG~~GvGKTTla~~La~~l~~~G~kVllv~~D~~ 138 (432)
T 2v3c_C 99 QNVILLVGIQGSGKTTTAAKLARYIQKRGLKPALIAADTY 138 (432)
T ss_dssp CCCEEEECCSSSSTTHHHHHHHHHHHHHHCCEEEECCSCC
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEecccc
Confidence 4578999999999999999998763 5778888865
No 347
>2chq_A Replication factor C small subunit; DNA-binding protein, DNA replication, clamp loader, AAA+ ATP ATP-binding, nucleotide-binding; HET: ANP; 3.5A {Archaeoglobus fulgidus} PDB: 2chv_A
Probab=96.17 E-value=0.0025 Score=59.16 Aligned_cols=84 Identities=13% Similarity=0.184 Sum_probs=46.4
Q ss_pred EEEEcCCCCcHHHHHHHHhccC-------CcEEEeCCcchhHHHHHHHHHHHH-------hCCCcEEEeCCC-CCHHHHH
Q psy4598 275 LIMIGSQGSGKSSFVSTYLKPL-------NYTTVNRDTLGSWQKCVSVMKAAL-------DSGLSVVVDNTN-PDKESRH 339 (369)
Q Consensus 275 Ill~G~pGSGKSTla~~L~~~~-------~~~~i~~D~~~~~~~~~~~~~~~l-------~~g~~vIiD~tn-~~~~~r~ 339 (369)
+++.|+||+|||++++.+++.+ .+..++.................. .....+|||... .+.....
T Consensus 41 ~ll~G~~G~GKt~la~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vliiDe~~~l~~~~~~ 120 (319)
T 2chq_A 41 LLFSGPPGTGKTATAIALARDLFGENWRDNFIEMNASDERGIDVVRHKIKEFARTAPIGGAPFKIIFLDEADALTADAQA 120 (319)
T ss_dssp EEEESSSSSSHHHHHHHHHHHHHTTCHHHHCEEEETTSTTCTTTSSHHHHHHHHSCCSSSCCCEEEEEETGGGSCHHHHH
T ss_pred EEEECcCCcCHHHHHHHHHHHhcCCcccCCeEEEeCccccChHHHHHHHHHHHhcCCCCCCCceEEEEeCCCcCCHHHHH
Confidence 7999999999999999998863 245555443211111111111111 123467788653 4555555
Q ss_pred HHHHHHHhcCCeEEEEEEe
Q psy4598 340 RYIEAAKQHGVRCIAVHMN 358 (369)
Q Consensus 340 ~~~~la~~~~~~v~~v~l~ 358 (369)
.+.....+....+.++...
T Consensus 121 ~L~~~le~~~~~~~~i~~~ 139 (319)
T 2chq_A 121 ALRRTMEMYSKSCRFILSC 139 (319)
T ss_dssp TTGGGTSSSSSSEEEEEEE
T ss_pred HHHHHHHhcCCCCeEEEEe
Confidence 5555554444445554443
No 348
>1nrj_B SR-beta, signal recognition particle receptor beta subunit; transmembrane, endoplasmic reticulum, GTP-binding; HET: GTP; 1.70A {Saccharomyces cerevisiae} SCOP: c.37.1.8
Probab=96.17 E-value=0.037 Score=48.22 Aligned_cols=24 Identities=29% Similarity=0.511 Sum_probs=21.1
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhcc
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKP 295 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~ 295 (369)
..-|+++|++|+||||+..+|...
T Consensus 12 ~~~i~~~G~~g~GKTsl~~~l~~~ 35 (218)
T 1nrj_B 12 QPSIIIAGPQNSGKTSLLTLLTTD 35 (218)
T ss_dssp CCEEEEECSTTSSHHHHHHHHHHS
T ss_pred CCEEEEECCCCCCHHHHHHHHhcC
Confidence 356899999999999999999864
No 349
>1n0w_A DNA repair protein RAD51 homolog 1; DNA repair, homologous recombination, breast cancer susceptibility, RECA-like ATPase, protein complex; HET: DNA MSE; 1.70A {Homo sapiens} SCOP: c.37.1.11
Probab=96.14 E-value=0.013 Score=52.03 Aligned_cols=33 Identities=18% Similarity=0.221 Sum_probs=27.0
Q ss_pred EEEEEEcCCCCcHHHHHHHHhcc-----------CCcEEEeCCc
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKP-----------LNYTTVNRDT 305 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~-----------~~~~~i~~D~ 305 (369)
.++.+.|+|||||||++..++.. .+..+++.+.
T Consensus 25 ~~~~i~G~~GsGKTtl~~~l~~~~~~~~~~g~~~~~~~~i~~~~ 68 (243)
T 1n0w_A 25 SITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDTEG 68 (243)
T ss_dssp SEEEEECCTTSSHHHHHHHHHHHTTSCGGGTCCSSEEEEEESSS
T ss_pred eEEEEECCCCCcHHHHHHHHHHHHhCchhcCCCCCeEEEEECCC
Confidence 68999999999999999999862 2467777665
No 350
>4g1u_C Hemin import ATP-binding protein HMUV; membrane transporter, type II ABC importer, HMUT, plasma MEM transport protein-hydrolase complex; 3.01A {Yersinia pestis}
Probab=96.14 E-value=0.029 Score=51.64 Aligned_cols=23 Identities=26% Similarity=0.508 Sum_probs=20.8
Q ss_pred EEEEEEcCCCCcHHHHHHHHhcc
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKP 295 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~ 295 (369)
.++.++|++||||||+.+.++-.
T Consensus 38 e~~~liG~nGsGKSTLl~~l~Gl 60 (266)
T 4g1u_C 38 EMVAIIGPNGAGKSTLLRLLTGY 60 (266)
T ss_dssp CEEEEECCTTSCHHHHHHHHTSS
T ss_pred CEEEEECCCCCcHHHHHHHHhcC
Confidence 57899999999999999999864
No 351
>2qp9_X Vacuolar protein sorting-associated protein 4; ATPase domain, beta domain, C-terminal helix, ATP-binding, E nucleotide-binding; 2.90A {Saccharomyces cerevisiae} PDB: 2qpa_A*
Probab=96.14 E-value=0.0027 Score=60.94 Aligned_cols=30 Identities=27% Similarity=0.376 Sum_probs=25.3
Q ss_pred EEEEEEcCCCCcHHHHHHHHhccCCcEEEe
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKPLNYTTVN 302 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~~~~~~i~ 302 (369)
.-|+|.|+||+|||++|++++..++..++.
T Consensus 85 ~~iLL~GppGtGKT~la~ala~~~~~~~~~ 114 (355)
T 2qp9_X 85 SGILLYGPPGTGKSYLAKAVATEANSTFFS 114 (355)
T ss_dssp CCEEEECSTTSCHHHHHHHHHHHHTCEEEE
T ss_pred ceEEEECCCCCcHHHHHHHHHHHhCCCEEE
Confidence 458899999999999999999987755543
No 352
>2og2_A Putative signal recognition particle receptor; nucleotide-binding, protein transport; 2.00A {Arabidopsis thaliana}
Probab=96.12 E-value=0.023 Score=54.70 Aligned_cols=37 Identities=22% Similarity=0.408 Sum_probs=28.1
Q ss_pred ccEEEEEEcCCCCcHHHHHHHHhccC----C-cEEEeCCcch
Q psy4598 271 LDSVLIMIGSQGSGKSSFVSTYLKPL----N-YTTVNRDTLG 307 (369)
Q Consensus 271 ~~~lIll~G~pGSGKSTla~~L~~~~----~-~~~i~~D~~~ 307 (369)
.+.+|.|+|++||||||+.+.|+..+ + +.+...|..+
T Consensus 156 ~g~vi~lvG~nGsGKTTll~~Lag~l~~~~G~V~l~g~D~~r 197 (359)
T 2og2_A 156 KPAVIMIVGVNGGGKTTSLGKLAHRLKNEGTKVLMAAGDTFR 197 (359)
T ss_dssp SSEEEEEECCTTSCHHHHHHHHHHHHHHTTCCEEEECCCCSC
T ss_pred CCeEEEEEcCCCChHHHHHHHHHhhccccCCEEEEecccccc
Confidence 45799999999999999999998653 3 4444556543
No 353
>1ofh_A ATP-dependent HSL protease ATP-binding subunit HSLU; chaperone, hydrolase, ATP-binding; HET: ADP; 2.5A {Haemophilus influenzae} SCOP: c.37.1.20 PDB: 1ofi_A*
Probab=96.10 E-value=0.0021 Score=59.42 Aligned_cols=34 Identities=26% Similarity=0.458 Sum_probs=26.6
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhccCC--cEEEeCCc
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKPLN--YTTVNRDT 305 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~~~--~~~i~~D~ 305 (369)
+.-++|.|+||+|||++|+.+++.++ ...++...
T Consensus 50 ~~~vll~G~~GtGKT~la~~la~~l~~~~~~i~~~~ 85 (310)
T 1ofh_A 50 PKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATK 85 (310)
T ss_dssp CCCEEEECCTTSSHHHHHHHHHHHHTCCEEEEEGGG
T ss_pred CceEEEECCCCCCHHHHHHHHHHHhCCCEEEEcchh
Confidence 45688999999999999999998865 34455443
No 354
>1um8_A ATP-dependent CLP protease ATP-binding subunit CL; CLPP binding loop, chaperone; HET: ADP; 2.60A {Helicobacter pylori} SCOP: c.37.1.20
Probab=96.08 E-value=0.0027 Score=61.20 Aligned_cols=29 Identities=34% Similarity=0.550 Sum_probs=24.5
Q ss_pred EEEEEEcCCCCcHHHHHHHHhccCCcEEE
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKPLNYTTV 301 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~~~~~~i 301 (369)
.-|+|.|+||+|||++|+.+++.++..++
T Consensus 73 ~~ill~Gp~GtGKT~la~~la~~l~~~~~ 101 (376)
T 1um8_A 73 SNILLIGPTGSGKTLMAQTLAKHLDIPIA 101 (376)
T ss_dssp CCEEEECCTTSSHHHHHHHHHHHTTCCEE
T ss_pred CCEEEECCCCCCHHHHHHHHHHHhCCCEE
Confidence 46899999999999999999998764433
No 355
>1xjc_A MOBB protein homolog; structural genomics, midwest center for structural GEN PSI, protein structure initiative, MCSG; 2.10A {Geobacillus stearothermophilus} SCOP: c.37.1.10
Probab=96.08 E-value=0.0046 Score=53.19 Aligned_cols=24 Identities=21% Similarity=0.458 Sum_probs=21.5
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhcc
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKP 295 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~ 295 (369)
+.+|.++|++||||||++..|.+.
T Consensus 4 ~~~i~i~G~sGsGKTTl~~~L~~~ 27 (169)
T 1xjc_A 4 MNVWQVVGYKHSGKTTLMEKWVAA 27 (169)
T ss_dssp CCEEEEECCTTSSHHHHHHHHHHH
T ss_pred CEEEEEECCCCCCHHHHHHHHHHh
Confidence 468999999999999999999875
No 356
>3bos_A Putative DNA replication factor; P-loop containing nucleoside triphosphate hydrolases, struct genomics; HET: MSE CDP; 1.75A {Shewanella amazonensis} PDB: 3sc3_A
Probab=96.07 E-value=0.0028 Score=56.00 Aligned_cols=35 Identities=9% Similarity=0.087 Sum_probs=27.2
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhccC-----CcEEEeCCcc
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKPL-----NYTTVNRDTL 306 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~~-----~~~~i~~D~~ 306 (369)
...++|.|+||+||||+++.+++.. .+.+++.+.+
T Consensus 52 ~~~~ll~G~~G~GKT~la~~l~~~~~~~~~~~~~~~~~~~ 91 (242)
T 3bos_A 52 VQAIYLWGPVKSGRTHLIHAACARANELERRSFYIPLGIH 91 (242)
T ss_dssp CSEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEGGGG
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEEHHHH
Confidence 4678999999999999999998753 3456665443
No 357
>3d8b_A Fidgetin-like protein 1; AAA+, ATPase, ADP, SGC, structural genomics consortium, ATP- hydrolase, magnesium, metal-binding, nucleotide-binding; HET: ADP; 2.00A {Homo sapiens}
Probab=96.07 E-value=0.0039 Score=59.80 Aligned_cols=34 Identities=15% Similarity=0.263 Sum_probs=27.3
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhccCCcEE--EeCCc
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKPLNYTT--VNRDT 305 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~~~~~~--i~~D~ 305 (369)
+.-|+|.|+||+|||++|++++...+..+ ++...
T Consensus 117 ~~~vLl~GppGtGKT~la~aia~~~~~~~~~i~~~~ 152 (357)
T 3d8b_A 117 PKGILLFGPPGTGKTLIGKCIASQSGATFFSISASS 152 (357)
T ss_dssp CSEEEEESSTTSSHHHHHHHHHHHTTCEEEEEEGGG
T ss_pred CceEEEECCCCCCHHHHHHHHHHHcCCeEEEEehHH
Confidence 45789999999999999999999876544 44433
No 358
>1tue_A Replication protein E1; helicase, replication, E1E2 complex, AAA+ protein; 2.10A {Human papillomavirus type 18} SCOP: c.37.1.20
Probab=96.06 E-value=0.0022 Score=57.06 Aligned_cols=30 Identities=20% Similarity=0.440 Sum_probs=24.2
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhccCCcEEE
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKPLNYTTV 301 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~~~~~~i 301 (369)
...+++.||||+||||+|.++++.+.-.++
T Consensus 58 kn~ili~GPPGtGKTt~a~ala~~l~g~i~ 87 (212)
T 1tue_A 58 KNCLVFCGPANTGKSYFGMSFIHFIQGAVI 87 (212)
T ss_dssp CSEEEEESCGGGCHHHHHHHHHHHHTCEEC
T ss_pred ccEEEEECCCCCCHHHHHHHHHHHhCCCee
Confidence 357999999999999999999987543333
No 359
>2ga8_A Hypothetical 39.9 kDa protein; YFR007W, YFH7, unknown function; HET: CME; 1.77A {Saccharomyces cerevisiae} PDB: 2gaa_A*
Probab=96.05 E-value=0.0017 Score=62.52 Aligned_cols=29 Identities=31% Similarity=0.484 Sum_probs=25.3
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhccCCcEE
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKPLNYTT 300 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~~~~~~ 300 (369)
...|+|+|+|||||||+++.|++.+++.+
T Consensus 24 ~~~i~l~G~~G~GKTTl~~~la~~l~~~f 52 (359)
T 2ga8_A 24 RVCVILVGSPGSGKSTIAEELCQIINEKY 52 (359)
T ss_dssp CEEEEEECCTTSSHHHHHHHHHHHHHHHH
T ss_pred eeEEEEECCCCCcHHHHHHHHHHHhCCCe
Confidence 35689999999999999999999877665
No 360
>3hr8_A Protein RECA; alpha and beta proteins (A/B, A+B), ATP-binding, cytoplasm, damage, DNA recombination, DNA repair, DNA-binding; 1.95A {Thermotoga maritima}
Probab=96.04 E-value=0.015 Score=55.92 Aligned_cols=34 Identities=12% Similarity=0.284 Sum_probs=27.7
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhccC-----CcEEEeCCc
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKPL-----NYTTVNRDT 305 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~~-----~~~~i~~D~ 305 (369)
..++++.|+||||||||+..++... .+.+|+...
T Consensus 61 G~i~~I~GppGsGKSTLal~la~~~~~~gg~VlyId~E~ 99 (356)
T 3hr8_A 61 GRIVEIFGQESSGKTTLALHAIAEAQKMGGVAAFIDAEH 99 (356)
T ss_dssp TEEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CcEEEEECCCCCCHHHHHHHHHHHHHhcCCeEEEEeccc
Confidence 3689999999999999999988652 466887765
No 361
>3czq_A Putative polyphosphate kinase 2; structural genomics, APC6299, PSI-2, structure initiative; HET: MSE GOL; 2.23A {Sinorhizobium meliloti}
Probab=96.04 E-value=0.0057 Score=57.45 Aligned_cols=98 Identities=15% Similarity=0.170 Sum_probs=63.2
Q ss_pred cccEEEEEEcCCCCcHHHHHHHHhccCC---cEEEeCCcchh---HHHHHHHHHHHH-hCCCcEEEeCCCCC--------
Q psy4598 270 ALDSVLIMIGSQGSGKSSFVSTYLKPLN---YTTVNRDTLGS---WQKCVSVMKAAL-DSGLSVVVDNTNPD-------- 334 (369)
Q Consensus 270 ~~~~lIll~G~pGSGKSTla~~L~~~~~---~~~i~~D~~~~---~~~~~~~~~~~l-~~g~~vIiD~tn~~-------- 334 (369)
..+.+|++-|.-||||||..+.|.+.++ +.++....=.. .+.........+ ..|..||.|-...+
T Consensus 84 ~~~vlIvfEG~DgAGKgt~Ik~L~e~Ldprg~~V~~~~~Pt~eE~~~~yl~R~~~~LP~~G~IvIfDRswYs~v~~~rv~ 163 (304)
T 3czq_A 84 GKRVMAVFEGRDAAGKGGAIHATTANMNPRSARVVALTKPTETERGQWYFQRYVATFPTAGEFVLFDRSWYNRAGVEPVM 163 (304)
T ss_dssp CCCEEEEEEESTTSSHHHHHHHHHTTSCTTTEEEEECCSCCHHHHTSCTTHHHHTTCCCTTCEEEEEECGGGGTTHHHHH
T ss_pred CCCeEEEEeCCCCCCHHHHHHHHHHHhcccCCeEEEeCCcChHHHhchHHHHHHHhcccCCeEEEEECCcchHHHHHHHh
Confidence 3478999999999999999999999874 33343221100 011122233334 78999999865432
Q ss_pred ----HHHHHH-HHH------HHHhcCCeEEEEEEeCCHHHHHHH
Q psy4598 335 ----KESRHR-YIE------AAKQHGVRCIAVHMNISKEHAKHN 367 (369)
Q Consensus 335 ----~~~r~~-~~~------la~~~~~~v~~v~l~~~~e~~~~R 367 (369)
...... +.. .+...|+++..+||++|.++..+|
T Consensus 164 g~~~~~e~~~~~~~In~FE~~L~~~G~~~lKf~L~Is~eeq~kR 207 (304)
T 3czq_A 164 GFCTPDQYEQFLKEAPRFEEMIANEGIHLFKFWINIGREMQLKR 207 (304)
T ss_dssp TSSCHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEECCHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHhCCCeeEEEEEECCHHHHHHH
Confidence 211111 111 345578999999999999998887
No 362
>1c9k_A COBU, adenosylcobinamide kinase; alpha/beta structure rossmann fold P-loop, transferase; HET: 5GP; 2.20A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1cbu_A
Probab=96.04 E-value=0.0032 Score=54.78 Aligned_cols=31 Identities=16% Similarity=0.292 Sum_probs=25.0
Q ss_pred EEEEEcCCCCcHHHHHHHHhcc-CCcEEEeCC
Q psy4598 274 VLIMIGSQGSGKSSFVSTYLKP-LNYTTVNRD 304 (369)
Q Consensus 274 lIll~G~pGSGKSTla~~L~~~-~~~~~i~~D 304 (369)
+|+++|.+||||||+|++|+.. ....+|.+.
T Consensus 1 ~ilV~Gg~~SGKS~~A~~la~~~~~~~yiaT~ 32 (180)
T 1c9k_A 1 MILVTGGARSGKSRHAEALIGDAPQVLYIATS 32 (180)
T ss_dssp CEEEEECTTSSHHHHHHHHHCSCSSEEEEECC
T ss_pred CEEEECCCCCcHHHHHHHHHhcCCCeEEEecC
Confidence 3789999999999999999976 235677663
No 363
>3bh0_A DNAB-like replicative helicase; ATPase, replication; 2.35A {Bacillus phage SPP1}
Probab=96.03 E-value=0.023 Score=53.44 Aligned_cols=32 Identities=13% Similarity=0.154 Sum_probs=25.9
Q ss_pred EEEEEEcCCCCcHHHHHHHHhcc-----CCcEEEeCC
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKP-----LNYTTVNRD 304 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~-----~~~~~i~~D 304 (369)
.+++++|.||+|||||+..++.. .++.+++.+
T Consensus 69 ~l~li~G~pG~GKTtl~l~ia~~~a~~g~~vl~~slE 105 (315)
T 3bh0_A 69 NFVLIAARPSMGKTAFALKQAKNMSDNDDVVNLHSLE 105 (315)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHHHTTTCEEEEEESS
T ss_pred cEEEEEeCCCCCHHHHHHHHHHHHHHcCCeEEEEECC
Confidence 68999999999999999998754 245666655
No 364
>2w58_A DNAI, primosome component (helicase loader); ATP-binding, nucleotide-binding, hydrolase; HET: ADP; 2.50A {Geobacillus kaustophilus HTA426}
Probab=96.00 E-value=0.0034 Score=54.64 Aligned_cols=33 Identities=24% Similarity=0.265 Sum_probs=25.4
Q ss_pred EEEEEEcCCCCcHHHHHHHHhccC-----CcEEEeCCc
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKPL-----NYTTVNRDT 305 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~~-----~~~~i~~D~ 305 (369)
..++|.|+||+||||+++.++... .+.+++...
T Consensus 55 ~~~~l~G~~GtGKT~la~~i~~~~~~~~~~~~~~~~~~ 92 (202)
T 2w58_A 55 KGLYLHGSFGVGKTYLLAAIANELAKRNVSSLIVYVPE 92 (202)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHHHHTTTCCEEEEEHHH
T ss_pred CeEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEEhHH
Confidence 678999999999999999998753 344455443
No 365
>2r2a_A Uncharacterized protein; zonular occludens toxin, structural genomics, APC84050.2, PS protein structure initiative; HET: MSE; 1.82A {Neisseria meningitidis MC58}
Probab=95.97 E-value=0.0038 Score=55.10 Aligned_cols=24 Identities=25% Similarity=0.538 Sum_probs=20.6
Q ss_pred cccEEEEEEcCCCCcHHHHHHHHh
Q psy4598 270 ALDSVLIMIGSQGSGKSSFVSTYL 293 (369)
Q Consensus 270 ~~~~lIll~G~pGSGKSTla~~L~ 293 (369)
.|+.+++++|+||||||++|..+.
T Consensus 3 ~~~mi~l~tG~pGsGKT~~a~~~~ 26 (199)
T 2r2a_A 3 AMAEICLITGTPGSGKTLKMVSMM 26 (199)
T ss_dssp -CCCEEEEECCTTSSHHHHHHHHH
T ss_pred cceeEEEEEeCCCCCHHHHHHHHH
Confidence 467799999999999999998863
No 366
>2qby_A CDC6 homolog 1, cell division control protein 6 homolog 1; winged-helix domain, helix-turn-helix, AAA+ ATPase domain, protein-DNA complex; HET: DNA SPD ADP; 3.35A {Sulfolobus solfataricus}
Probab=95.97 E-value=0.0076 Score=57.16 Aligned_cols=26 Identities=27% Similarity=0.441 Sum_probs=22.5
Q ss_pred ccEEEEEEcCCCCcHHHHHHHHhccC
Q psy4598 271 LDSVLIMIGSQGSGKSSFVSTYLKPL 296 (369)
Q Consensus 271 ~~~lIll~G~pGSGKSTla~~L~~~~ 296 (369)
.+..+++.|+||+||||+++.+++..
T Consensus 44 ~~~~vli~G~~G~GKTtl~~~l~~~~ 69 (386)
T 2qby_A 44 KPNNIFIYGLTGTGKTAVVKFVLSKL 69 (386)
T ss_dssp CCCCEEEEECTTSSHHHHHHHHHHHH
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHH
Confidence 34678999999999999999998754
No 367
>1iy2_A ATP-dependent metalloprotease FTSH; AAA domain fold, hydrolase; 3.20A {Thermus thermophilus} SCOP: c.37.1.20
Probab=95.96 E-value=0.0034 Score=57.82 Aligned_cols=29 Identities=17% Similarity=0.446 Sum_probs=23.9
Q ss_pred EEEEcCCCCcHHHHHHHHhccCC--cEEEeC
Q psy4598 275 LIMIGSQGSGKSSFVSTYLKPLN--YTTVNR 303 (369)
Q Consensus 275 Ill~G~pGSGKSTla~~L~~~~~--~~~i~~ 303 (369)
|+|.|+|||||||+++.++...+ ...++.
T Consensus 76 vll~Gp~GtGKTtl~~~i~~~~~~~~i~~~~ 106 (278)
T 1iy2_A 76 VLLVGPPGVGKTHLARAVAGEARVPFITASG 106 (278)
T ss_dssp EEEECCTTSSHHHHHHHHHHHTTCCEEEEEH
T ss_pred EEEECCCcChHHHHHHHHHHHcCCCEEEecH
Confidence 89999999999999999998764 444443
No 368
>1pui_A ENGB, probable GTP-binding protein ENGB; structural genomics, nysgxrc T16, GTPase, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.37.1.8
Probab=95.96 E-value=0.019 Score=49.66 Aligned_cols=24 Identities=25% Similarity=0.317 Sum_probs=20.9
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhcc
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKP 295 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~ 295 (369)
...|.++|++||||||+.+.|...
T Consensus 26 ~~~v~lvG~~g~GKSTLl~~l~g~ 49 (210)
T 1pui_A 26 GIEVAFAGRSNAGKSSALNTLTNQ 49 (210)
T ss_dssp SEEEEEEECTTSSHHHHHTTTCCC
T ss_pred CcEEEEECCCCCCHHHHHHHHhCC
Confidence 457899999999999999998753
No 369
>1np6_A Molybdopterin-guanine dinucleotide biosynthesis protein B; mixed alpha-beta fold, elongated beta-sheet, walker A motif, P-loop structural motif; 1.90A {Escherichia coli} SCOP: c.37.1.10 PDB: 1p9n_A
Probab=95.95 E-value=0.0038 Score=53.88 Aligned_cols=25 Identities=16% Similarity=0.401 Sum_probs=22.1
Q ss_pred ccEEEEEEcCCCCcHHHHHHHHhcc
Q psy4598 271 LDSVLIMIGSQGSGKSSFVSTYLKP 295 (369)
Q Consensus 271 ~~~lIll~G~pGSGKSTla~~L~~~ 295 (369)
|..+++++|++||||||+.+.|...
T Consensus 5 ~~~~i~i~G~sGsGKTTl~~~l~~~ 29 (174)
T 1np6_A 5 MIPLLAFAAWSGTGKTTLLKKLIPA 29 (174)
T ss_dssp CCCEEEEECCTTSCHHHHHHHHHHH
T ss_pred cceEEEEEeCCCCCHHHHHHHHHHh
Confidence 4578999999999999999998865
No 370
>2r62_A Cell division protease FTSH homolog; ATPase domain, ATP-binding, cell CELL division, hydrolase, membrane, metal-binding; 3.30A {Helicobacter pylori} PDB: 2r65_A*
Probab=95.95 E-value=0.0013 Score=60.12 Aligned_cols=26 Identities=15% Similarity=0.376 Sum_probs=22.4
Q ss_pred EEEEEEcCCCCcHHHHHHHHhccCCc
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKPLNY 298 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~~~~ 298 (369)
.-++|.|+||+|||++|+.++...+.
T Consensus 45 ~~vll~G~~GtGKT~la~~la~~~~~ 70 (268)
T 2r62_A 45 KGVLLVGPPGTGKTLLAKAVAGEAHV 70 (268)
T ss_dssp SCCCCBCSSCSSHHHHHHHHHHHHTC
T ss_pred ceEEEECCCCCcHHHHHHHHHHHhCC
Confidence 34789999999999999999987643
No 371
>1fnn_A CDC6P, cell division control protein 6; ORC1, AAA protein, DNA replication initation factor, cell cycle control factor; HET: ADP; 2.00A {Pyrobaculum aerophilum} SCOP: a.4.5.11 c.37.1.20
Probab=95.95 E-value=0.022 Score=54.17 Aligned_cols=24 Identities=17% Similarity=0.342 Sum_probs=21.4
Q ss_pred EEEEEEcCCCCcHHHHHHHHhccC
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKPL 296 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~~ 296 (369)
..++|.|+||+||||+++.++...
T Consensus 45 ~~~li~G~~G~GKTtl~~~l~~~~ 68 (389)
T 1fnn_A 45 PRATLLGRPGTGKTVTLRKLWELY 68 (389)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHH
T ss_pred CeEEEECCCCCCHHHHHHHHHHHH
Confidence 378999999999999999998754
No 372
>4a1f_A DNAB helicase, replicative DNA helicase; hydrolase, DNA replication, ATPase; HET: FLC; 2.50A {Helicobacter pylori}
Probab=95.94 E-value=0.05 Score=51.90 Aligned_cols=33 Identities=15% Similarity=0.220 Sum_probs=26.4
Q ss_pred EEEEEEcCCCCcHHHHHHHHhcc-----CCcEEEeCCc
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKP-----LNYTTVNRDT 305 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~-----~~~~~i~~D~ 305 (369)
.++++.|.||+|||||+..++.. .++.+++.+.
T Consensus 47 ~LiiIaG~pG~GKTt~al~ia~~~a~~g~~Vl~fSlEm 84 (338)
T 4a1f_A 47 SLVIIGARPSMGKTSLMMNMVLSALNDDRGVAVFSLEM 84 (338)
T ss_dssp CEEEEEECTTSCHHHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred cEEEEEeCCCCCHHHHHHHHHHHHHHcCCeEEEEeCCC
Confidence 68999999999999999998765 2455666653
No 373
>1rj9_A FTSY, signal recognition protein; SRP-GTPase domain, heterodimer, nucleotide twinning, protein complex, protein transport; HET: GCP; 1.90A {Thermus aquaticus} SCOP: a.24.13.1 c.37.1.10 PDB: 2q9c_A* 2q9b_A* 2q9a_A* 1okk_D* 2xkv_D 2iyl_D* 2cnw_D* 2j7p_D*
Probab=95.93 E-value=0.018 Score=54.10 Aligned_cols=35 Identities=20% Similarity=0.376 Sum_probs=26.3
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhccC-----CcEEEeCCcc
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKPL-----NYTTVNRDTL 306 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~~-----~~~~i~~D~~ 306 (369)
+.+|.|+|++||||||+++.|+..+ .+.+...|..
T Consensus 102 g~vi~lvG~nGsGKTTll~~Lagll~~~~g~V~l~g~D~~ 141 (304)
T 1rj9_A 102 GRVVLVVGVNGVGKTTTIAKLGRYYQNLGKKVMFCAGDTF 141 (304)
T ss_dssp SSEEEEECSTTSSHHHHHHHHHHHHHTTTCCEEEECCCCS
T ss_pred CeEEEEECCCCCcHHHHHHHHHHHHHhcCCEEEEEeecCC
Confidence 4688999999999999999998542 3444455543
No 374
>3nh6_A ATP-binding cassette SUB-family B member 6, mitoc; ABC-transporter, ABCB6, nucleotide binding domain, heme BIOS transport protein; 2.00A {Homo sapiens} PDB: 3nh9_A* 3nha_A* 3nhb_A*
Probab=95.93 E-value=0.027 Score=53.04 Aligned_cols=24 Identities=25% Similarity=0.555 Sum_probs=21.4
Q ss_pred EEEEEEcCCCCcHHHHHHHHhccC
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKPL 296 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~~ 296 (369)
.++.|+|++||||||+.+.|...+
T Consensus 81 e~vaivG~sGsGKSTLl~ll~gl~ 104 (306)
T 3nh6_A 81 QTLALVGPSGAGKSTILRLLFRFY 104 (306)
T ss_dssp CEEEEESSSCHHHHHHHHHHTTSS
T ss_pred CEEEEECCCCchHHHHHHHHHcCC
Confidence 578999999999999999998753
No 375
>1znw_A Guanylate kinase, GMP kinase; ATP:GMP-phosphotransferase, TR; 2.10A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1znx_A* 1zny_A* 1znz_A* 1s4q_A 1z8f_A
Probab=95.93 E-value=0.0039 Score=54.84 Aligned_cols=24 Identities=25% Similarity=0.459 Sum_probs=21.3
Q ss_pred EEEEEEcCCCCcHHHHHHHHhccC
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKPL 296 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~~ 296 (369)
.++.|+|++||||||+.+.+....
T Consensus 21 ei~~l~GpnGsGKSTLl~~l~gl~ 44 (207)
T 1znw_A 21 RVVVLSGPSAVGKSTVVRCLRERI 44 (207)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHHS
T ss_pred CEEEEECCCCCCHHHHHHHHHhhC
Confidence 588999999999999999997654
No 376
>3p32_A Probable GTPase RV1496/MT1543; structural genomics, seattle structural genomics center for infectious disease, ssgcid, MEAB, MMAA; HET: GDP PGE; 1.90A {Mycobacterium tuberculosis} PDB: 3md0_A* 4gt1_A* 3nxs_A* 3tk1_A*
Probab=95.91 E-value=0.039 Score=52.79 Aligned_cols=35 Identities=20% Similarity=0.206 Sum_probs=27.5
Q ss_pred cccEEEEEEcCCCCcHHHHHHHHhccC-----CcEEEeCC
Q psy4598 270 ALDSVLIMIGSQGSGKSSFVSTYLKPL-----NYTTVNRD 304 (369)
Q Consensus 270 ~~~~lIll~G~pGSGKSTla~~L~~~~-----~~~~i~~D 304 (369)
.....|.++|.||+||||++..|+..+ .+.+++.|
T Consensus 77 ~~~~~I~i~G~~G~GKSTl~~~L~~~l~~~g~kV~vi~~D 116 (355)
T 3p32_A 77 GNAHRVGITGVPGVGKSTAIEALGMHLIERGHRVAVLAVD 116 (355)
T ss_dssp CCSEEEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEEEEC
T ss_pred CCceEEEEECCCCCCHHHHHHHHHHHHHhCCCceEEEecC
Confidence 345789999999999999999997542 45566666
No 377
>1ls1_A Signal recognition particle protein; FFH, SRP54, SRP, GTPase, ultrahigh resolution, protein transport; 1.10A {Thermus aquaticus} SCOP: a.24.13.1 c.37.1.10 PDB: 1jpn_B* 1jpj_A* 1ry1_U* 2j45_A* 1o87_A* 2c04_A* 2j46_A* 1rj9_B* 2c03_A* 2j7p_A* 1okk_A* 2cnw_A* 1ng1_A* 2xkv_A 3ng1_A 1ffh_A 2ng1_A*
Probab=95.91 E-value=0.047 Score=50.93 Aligned_cols=36 Identities=25% Similarity=0.296 Sum_probs=28.1
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhccC-----CcEEEeCCcch
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKPL-----NYTTVNRDTLG 307 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~~-----~~~~i~~D~~~ 307 (369)
+.+|.++|++|+||||++..|+..+ ...+++.|..+
T Consensus 98 ~~~i~i~g~~G~GKTT~~~~la~~~~~~~~~v~l~~~d~~~ 138 (295)
T 1ls1_A 98 RNLWFLVGLQGSGKTTTAAKLALYYKGKGRRPLLVAADTQR 138 (295)
T ss_dssp SEEEEEECCTTTTHHHHHHHHHHHHHHTTCCEEEEECCSSC
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEecCCccc
Confidence 4577888999999999999998642 45677777653
No 378
>1dek_A Deoxynucleoside monophosphate kinase; transferase, phosphotransferase; HET: DGP; 2.00A {Enterobacteria phage T4} SCOP: c.37.1.1 PDB: 1del_A*
Probab=95.90 E-value=0.0048 Score=56.15 Aligned_cols=32 Identities=13% Similarity=0.212 Sum_probs=28.3
Q ss_pred EEEEEEcCCCCcHHHHHHHHhccCCcEEEeCC
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKPLNYTTVNRD 304 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~~~~~~i~~D 304 (369)
.+|.|+|.+||||||+++.|.+.+++.+++..
T Consensus 2 ~~i~ltG~~~sGK~tv~~~l~~~~g~~~~~~~ 33 (241)
T 1dek_A 2 KLIFLSGVKRSGKDTTADFIMSNYSAVKYQLA 33 (241)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHSCEEECCTT
T ss_pred eEEEEECCCCCCHHHHHHHHHHhcCCeEEecC
Confidence 57899999999999999999998888877654
No 379
>3vfd_A Spastin; ATPase, microtubule severing, hydrolase; 3.30A {Homo sapiens}
Probab=95.89 E-value=0.0047 Score=59.88 Aligned_cols=31 Identities=26% Similarity=0.370 Sum_probs=26.1
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhccCCcEEEe
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKPLNYTTVN 302 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~~~~~~i~ 302 (369)
+.-|+|.|+||+|||++|++++...+..++.
T Consensus 148 ~~~vLL~GppGtGKT~la~aia~~~~~~~~~ 178 (389)
T 3vfd_A 148 ARGLLLFGPPGNGKTMLAKAVAAESNATFFN 178 (389)
T ss_dssp CSEEEEESSTTSCHHHHHHHHHHHTTCEEEE
T ss_pred CceEEEECCCCCCHHHHHHHHHHhhcCcEEE
Confidence 4578999999999999999999987655443
No 380
>1pzn_A RAD51, DNA repair and recombination protein RAD51, RADA; heptameric ring, heptamer, ring, oligomer, RAD51 polymerizat motif; HET: DNA; 2.85A {Pyrococcus furiosus} SCOP: a.60.4.1 c.37.1.11
Probab=95.87 E-value=0.05 Score=52.03 Aligned_cols=24 Identities=25% Similarity=0.380 Sum_probs=21.5
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhcc
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKP 295 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~ 295 (369)
-.++.|+|+||||||||+..++..
T Consensus 131 G~i~~I~G~~GsGKTTL~~~l~~~ 154 (349)
T 1pzn_A 131 QAITEVFGEFGSGKTQLAHTLAVM 154 (349)
T ss_dssp SEEEEEEESTTSSHHHHHHHHHHH
T ss_pred CeEEEEECCCCCCHHHHHHHHHHH
Confidence 468999999999999999999764
No 381
>3aez_A Pantothenate kinase; transferase, homodimer, COA biosynthesis, nucleotide binding binding, cytoplasm, nucleotide-binding; HET: GDP PAZ; 2.20A {Mycobacterium tuberculosis} PDB: 2ges_A* 2geu_A* 2gev_A* 2zs7_A* 2zs8_A* 2zs9_A* 2zsa_A* 2zsb_A* 2zsd_A* 2zse_A* 2zsf_A* 2get_A* 3af0_A* 3af1_A* 3af2_A* 3af3_A* 3af4_A* 3avp_A* 3avo_A* 3avq_A*
Probab=95.85 E-value=0.0052 Score=58.06 Aligned_cols=37 Identities=22% Similarity=0.233 Sum_probs=29.6
Q ss_pred cccEEEEEEcCCCCcHHHHHHHHhccC-------CcEEEeCCcc
Q psy4598 270 ALDSVLIMIGSQGSGKSSFVSTYLKPL-------NYTTVNRDTL 306 (369)
Q Consensus 270 ~~~~lIll~G~pGSGKSTla~~L~~~~-------~~~~i~~D~~ 306 (369)
..+.+|.|+|++||||||+++.|+..+ .+.++.+|.+
T Consensus 88 ~~g~ivgI~G~sGsGKSTL~~~L~gll~~~~G~~~v~~v~qd~~ 131 (312)
T 3aez_A 88 PVPFIIGVAGSVAVGKSTTARVLQALLARWDHHPRVDLVTTDGF 131 (312)
T ss_dssp CCCEEEEEECCTTSCHHHHHHHHHHHHHTSTTCCCEEEEEGGGG
T ss_pred CCCEEEEEECCCCchHHHHHHHHHhhccccCCCCeEEEEecCcc
Confidence 446799999999999999999998743 3567777764
No 382
>1svm_A Large T antigen; AAA+ fold, viral protein; HET: ATP; 1.94A {Simian virus 40} SCOP: c.37.1.20 PDB: 1svl_A* 1svo_A 1n25_A 2h1l_A
Probab=95.84 E-value=0.0048 Score=59.94 Aligned_cols=33 Identities=18% Similarity=0.275 Sum_probs=27.1
Q ss_pred cccEEEEEEcCCCCcHHHHHHHHhccCCcEEEe
Q psy4598 270 ALDSVLIMIGSQGSGKSSFVSTYLKPLNYTTVN 302 (369)
Q Consensus 270 ~~~~lIll~G~pGSGKSTla~~L~~~~~~~~i~ 302 (369)
+...+|++.|+|||||||+++.++...+..++.
T Consensus 167 ~~~~~i~l~G~~GsGKSTl~~~l~~~~~g~~~~ 199 (377)
T 1svm_A 167 PKKRYWLFKGPIDSGKTTLAAALLELCGGKALN 199 (377)
T ss_dssp TTCCEEEEECSTTSSHHHHHHHHHHHHCCEEEC
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHhhcCCcEEE
Confidence 345689999999999999999999876555554
No 383
>1u0j_A DNA replication protein; AAA+ protein, P-loop atpases, helicase; HET: DNA ADP; 2.10A {Adeno-associated virus - 2} SCOP: c.37.1.20 PDB: 1s9h_A
Probab=95.84 E-value=0.0041 Score=57.45 Aligned_cols=51 Identities=14% Similarity=0.145 Sum_probs=38.2
Q ss_pred hccCCCcccccccccccchhhhhhhccccccEEEEEEcCCCCcHHHHHHHHhcc
Q psy4598 242 TYLKPLNYTTVNRDTLGSWQKCVSVMKAALDSVLIMIGSQGSGKSSFVSTYLKP 295 (369)
Q Consensus 242 ~~~~~~~~~~i~r~~~~~~~~~~~~~~~~~~~lIll~G~pGSGKSTla~~L~~~ 295 (369)
+++.-.|| |=..+..+-.++.....+....|+|.||||+|||+++.+++..
T Consensus 77 ~~l~~qg~---~~~~~~~~l~~~l~~~~~~~n~~~l~GppgtGKt~~a~ala~~ 127 (267)
T 1u0j_A 77 KILELNGY---DPQYAASVFLGWATKKFGKRNTIWLFGPATTGKTNIAEAIAHT 127 (267)
T ss_dssp HHHHHTTC---CHHHHHHHHHHHHTTCSTTCCEEEEECSTTSSHHHHHHHHHHH
T ss_pred HHHHHcCC---CHHHHHHHHHHHHhCCCCCCcEEEEECCCCCCHHHHHHHHHhh
Confidence 34433454 3345666677777777666778999999999999999999974
No 384
>3clv_A RAB5 protein, putative; malaria, GTPase, structural genomics, GTP-binding, nucleotide-binding, signaling protein; HET: GDP; 1.89A {Plasmodium falciparum}
Probab=95.84 E-value=0.015 Score=49.46 Aligned_cols=28 Identities=25% Similarity=0.317 Sum_probs=22.6
Q ss_pred cccccEEEEEEcCCCCcHHHHHHHHhcc
Q psy4598 268 KAALDSVLIMIGSQGSGKSSFVSTYLKP 295 (369)
Q Consensus 268 ~~~~~~lIll~G~pGSGKSTla~~L~~~ 295 (369)
+.....-|+++|.+|+|||||..+|...
T Consensus 3 ~~~~~~ki~v~G~~~~GKSsli~~l~~~ 30 (208)
T 3clv_A 3 EKKSSYKTVLLGESSVGKSSIVLRLTKD 30 (208)
T ss_dssp CCCSSEEEEEECCTTSSHHHHHHHHHHS
T ss_pred CCCcceEEEEECCCCCCHHHHHHHHHhC
Confidence 3334456899999999999999999754
No 385
>2ehv_A Hypothetical protein PH0186; KAIC, RECA ATPase, unknown function; HET: ADP; 2.07A {Pyrococcus horikoshii} PDB: 2zts_A*
Probab=95.84 E-value=0.0043 Score=55.49 Aligned_cols=33 Identities=18% Similarity=0.453 Sum_probs=25.0
Q ss_pred EEEEEEcCCCCcHHHHHHHHh-----cc-CCcEEEeCCc
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYL-----KP-LNYTTVNRDT 305 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~-----~~-~~~~~i~~D~ 305 (369)
.++.+.|++||||||+++.++ .. .+..+++.+.
T Consensus 31 ~~~~l~GpnGsGKSTLl~~i~~~~~~~~~~~~~~~~~~~ 69 (251)
T 2ehv_A 31 TTVLLTGGTGTGKTTFAAQFIYKGAEEYGEPGVFVTLEE 69 (251)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHHHHHHCCCEEEEESSS
T ss_pred cEEEEEeCCCCCHHHHHHHHHHHHHHhCCCeEEEEEccC
Confidence 688999999999999999887 22 2455665543
No 386
>2z4s_A Chromosomal replication initiator protein DNAA; AAA+ ATPase, domain III (ATPase domain), ATP-binding, cytoplasm, DNA replication; HET: ADP; 3.00A {Thermotoga maritima} PDB: 2z4r_A*
Probab=95.82 E-value=0.012 Score=58.12 Aligned_cols=73 Identities=8% Similarity=0.149 Sum_probs=42.9
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhccC-------CcEEEeCCcchh-HHHH-----HHHHHHHHh-CCCcEEEeCCCC---C
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKPL-------NYTTVNRDTLGS-WQKC-----VSVMKAALD-SGLSVVVDNTNP---D 334 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~~-------~~~~i~~D~~~~-~~~~-----~~~~~~~l~-~g~~vIiD~tn~---~ 334 (369)
+.-++|.|+||+||||+++.++... .+.+++...+.. +... .......+. ....++||.... .
T Consensus 130 ~~~lll~Gp~G~GKTtLa~aia~~l~~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vL~IDEi~~l~~~ 209 (440)
T 2z4s_A 130 YNPLFIYGGVGLGKTHLLQSIGNYVVQNEPDLRVMYITSEKFLNDLVDSMKEGKLNEFREKYRKKVDILLIDDVQFLIGK 209 (440)
T ss_dssp SCCEEEECSSSSSHHHHHHHHHHHHHHHCCSSCEEEEEHHHHHHHHHHHHHTTCHHHHHHHHTTTCSEEEEECGGGGSSC
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHHHHhCCCCeEEEeeHHHHHHHHHHHHHcccHHHHHHHhcCCCCEEEEeCcccccCC
Confidence 4568999999999999999998753 345666555421 1110 112223334 455778887532 2
Q ss_pred HHHHHHHHHH
Q psy4598 335 KESRHRYIEA 344 (369)
Q Consensus 335 ~~~r~~~~~l 344 (369)
......+...
T Consensus 210 ~~~q~~l~~~ 219 (440)
T 2z4s_A 210 TGVQTELFHT 219 (440)
T ss_dssp HHHHHHHHHH
T ss_pred hHHHHHHHHH
Confidence 2445555444
No 387
>1z6g_A Guanylate kinase; structural genomics, SGC, structural genom consortium, transferase; HET: EPE; 2.18A {Plasmodium falciparum}
Probab=95.82 E-value=0.0039 Score=55.48 Aligned_cols=25 Identities=24% Similarity=0.495 Sum_probs=21.9
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhccC
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKPL 296 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~~ 296 (369)
..++.|+||+||||||+.+.|....
T Consensus 23 G~~~~lvGpsGsGKSTLl~~L~g~~ 47 (218)
T 1z6g_A 23 IYPLVICGPSGVGKGTLIKKLLNEF 47 (218)
T ss_dssp CCCEEEECSTTSSHHHHHHHHHHHS
T ss_pred CCEEEEECCCCCCHHHHHHHHHhhC
Confidence 3578999999999999999998754
No 388
>2f1r_A Molybdopterin-guanine dinucleotide biosynthesis protein B (MOBB); structural genomics, PSI, protein structure initiative; 2.10A {Archaeoglobus fulgidus}
Probab=95.77 E-value=0.0025 Score=54.88 Aligned_cols=25 Identities=20% Similarity=0.551 Sum_probs=21.0
Q ss_pred ccEEEEEEcCCCCcHHHHHHHHhcc
Q psy4598 271 LDSVLIMIGSQGSGKSSFVSTYLKP 295 (369)
Q Consensus 271 ~~~lIll~G~pGSGKSTla~~L~~~ 295 (369)
|+++|.++|++||||||+++.|...
T Consensus 1 m~~~v~IvG~SGsGKSTL~~~L~~~ 25 (171)
T 2f1r_A 1 MSLILSIVGTSDSGKTTLITRMMPI 25 (171)
T ss_dssp --CEEEEEESCHHHHHHHHHHHHHH
T ss_pred CceEEEEECCCCCCHHHHHHHHHHH
Confidence 3568899999999999999999865
No 389
>2zan_A Vacuolar protein sorting-associating protein 4B; SKD1, VPS4B, AAA ATPase, ATP-binding, coiled coil, membrane, nucleotide-binding, phosphorylation; HET: ATP; 3.00A {Mus musculus} PDB: 2zam_A* 2zao_A* 2jqh_A 2jqk_A 1wr0_A 2jq9_A 2k3w_A 1yxr_A
Probab=95.77 E-value=0.0056 Score=60.62 Aligned_cols=34 Identities=21% Similarity=0.343 Sum_probs=26.1
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhccC-CcE--EEeCCc
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKPL-NYT--TVNRDT 305 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~~-~~~--~i~~D~ 305 (369)
+.-|+|.||||+|||++|++++... +.. .++...
T Consensus 167 ~~~vLL~GppGtGKT~lA~aia~~~~~~~~~~v~~~~ 203 (444)
T 2zan_A 167 WRGILLFGPPGTGKSYLAKAVATEANNSTFFSISSSD 203 (444)
T ss_dssp CSEEEEECSTTSSHHHHHHHHHHHCCSSEEEEECCC-
T ss_pred CceEEEECCCCCCHHHHHHHHHHHcCCCCEEEEeHHH
Confidence 3578999999999999999999887 444 344433
No 390
>1u94_A RECA protein, recombinase A; homologous recombination, ATPase, DNA repair, DNA binding protein; 1.90A {Escherichia coli} SCOP: c.37.1.11 d.48.1.1 PDB: 1u98_A 1u99_A 1xms_A* 1xmv_A* 2rec_A 2reb_A 1n03_A* 1rea_A 1aa3_A
Probab=95.77 E-value=0.018 Score=55.30 Aligned_cols=34 Identities=12% Similarity=0.324 Sum_probs=27.7
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhcc-----CCcEEEeCCc
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKP-----LNYTTVNRDT 305 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~-----~~~~~i~~D~ 305 (369)
..++++.|+|||||||+|..++.. ..+.+++.+.
T Consensus 63 G~ii~I~G~pGsGKTtLal~la~~~~~~g~~vlyid~E~ 101 (356)
T 1u94_A 63 GRIVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEH 101 (356)
T ss_dssp TSEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 358899999999999999998764 2577888754
No 391
>2gno_A DNA polymerase III, gamma subunit-related protein; structural genomics, joint center for structural genomics, J protein structure initiative; HET: DNA; 2.00A {Thermotoga maritima} SCOP: a.80.1.1 c.37.1.20
Probab=95.76 E-value=0.032 Score=52.40 Aligned_cols=87 Identities=8% Similarity=0.097 Sum_probs=54.6
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhcc--------CCcEEEeCCc--ch--hHHHHHHHHHHHH--hCCCcEEEeCC-CCCHH
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKP--------LNYTTVNRDT--LG--SWQKCVSVMKAAL--DSGLSVVVDNT-NPDKE 336 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~--------~~~~~i~~D~--~~--~~~~~~~~~~~~l--~~g~~vIiD~t-n~~~~ 336 (369)
+..+++.||||+||||+++.+++. .+...++.+. .. ..+.+.+.+...- ...+.||||.. ..+..
T Consensus 18 ~~~~Lf~Gp~G~GKtt~a~~la~~~~~~~~~~~d~~~l~~~~~~~~id~ir~li~~~~~~p~~~~~kvviIdead~lt~~ 97 (305)
T 2gno_A 18 GISILINGEDLSYPREVSLELPEYVEKFPPKASDVLEIDPEGENIGIDDIRTIKDFLNYSPELYTRKYVIVHDCERMTQQ 97 (305)
T ss_dssp SEEEEEECSSSSHHHHHHHHHHHHHHTSCCCTTTEEEECCSSSCBCHHHHHHHHHHHTSCCSSSSSEEEEETTGGGBCHH
T ss_pred CcEEEEECCCCCCHHHHHHHHHHhCchhhccCCCEEEEcCCcCCCCHHHHHHHHHHHhhccccCCceEEEeccHHHhCHH
Confidence 468899999999999999999873 3566777642 22 1222333222111 12346778764 34667
Q ss_pred HHHHHHHHHHhcCCeEEEEEEe
Q psy4598 337 SRHRYIEAAKQHGVRCIAVHMN 358 (369)
Q Consensus 337 ~r~~~~~la~~~~~~v~~v~l~ 358 (369)
..+.+++...+..-.++++.+.
T Consensus 98 a~naLLk~LEep~~~t~fIl~t 119 (305)
T 2gno_A 98 AANAFLKALEEPPEYAVIVLNT 119 (305)
T ss_dssp HHHHTHHHHHSCCTTEEEEEEE
T ss_pred HHHHHHHHHhCCCCCeEEEEEE
Confidence 7777888877765555555554
No 392
>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*
Probab=95.72 E-value=0.0056 Score=55.21 Aligned_cols=65 Identities=14% Similarity=0.208 Sum_probs=0.0
Q ss_pred CceEEEEecCCceeecCCCCCCCCCccccccccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHc
Q psy4598 24 SAKIASFDLDGTLITTKSGKVFPVDTHDWKLLFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSL 103 (369)
Q Consensus 24 ~~k~~~fDlDgTLi~~~sg~~~~~~~~d~~~~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l 103 (369)
+..+++||+||||+.+.. ..+...++|++++ +|++++|+|-.+ ...+..+++.+
T Consensus 2 ~~~li~~DlDGTLl~~~~-------------~~~~~~~~l~~~~-~gi~v~iaTGR~------------~~~~~~~~~~l 55 (244)
T 1s2o_A 2 RQLLLISDLDNTWVGDQQ-------------ALEHLQEYLGDRR-GNFYLAYATGRS------------YHSARELQKQV 55 (244)
T ss_dssp CSEEEEECTBTTTBSCHH-------------HHHHHHHHHHTTG-GGEEEEEECSSC------------HHHHHHHHHHH
T ss_pred CCeEEEEeCCCCCcCCHH-------------HHHHHHHHHHHhc-CCCEEEEEcCCC------------HHHHHHHHHHc
Q ss_pred CCC-eEEEEecC
Q psy4598 104 NVP-VQMFVATQ 114 (369)
Q Consensus 104 ~i~-~~~~~~~~ 114 (369)
++. ...++|..
T Consensus 56 ~l~~~~~~I~~N 67 (244)
T 1s2o_A 56 GLMEPDYWLTAV 67 (244)
T ss_dssp TCCCCSEEEETT
T ss_pred CCCCCCEEEECC
No 393
>2c9o_A RUVB-like 1; hexameric helicase, AAA+-ATPase, ATP-binding, chromatin regulator, growth regulation, hydrolase, nuclear protein, DNA recombination; HET: ADP; 2.2A {Homo sapiens} PDB: 2xsz_A*
Probab=95.69 E-value=0.0045 Score=61.47 Aligned_cols=25 Identities=20% Similarity=0.506 Sum_probs=22.7
Q ss_pred EEEEEEcCCCCcHHHHHHHHhccCC
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKPLN 297 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~~~ 297 (369)
.-++|.||||+|||++|+++++.++
T Consensus 64 ~~iLl~GppGtGKT~la~ala~~l~ 88 (456)
T 2c9o_A 64 RAVLLAGPPGTGKTALALAIAQELG 88 (456)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHHC
T ss_pred CeEEEECCCcCCHHHHHHHHHHHhC
Confidence 4589999999999999999999865
No 394
>3fvq_A Fe(3+) IONS import ATP-binding protein FBPC; nucleotide binding domain, ABC motor domain, ferric iron TRA ATP-binding, cell inner membrane; HET: ATP; 1.90A {Neisseria gonorrhoeae}
Probab=95.65 E-value=0.053 Score=52.14 Aligned_cols=23 Identities=26% Similarity=0.569 Sum_probs=20.9
Q ss_pred EEEEEEcCCCCcHHHHHHHHhcc
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKP 295 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~ 295 (369)
.++.|.||+||||||+.+.++-.
T Consensus 31 e~~~llGpsGsGKSTLLr~iaGl 53 (359)
T 3fvq_A 31 EILFIIGASGCGKTTLLRCLAGF 53 (359)
T ss_dssp CEEEEEESTTSSHHHHHHHHHTS
T ss_pred CEEEEECCCCchHHHHHHHHhcC
Confidence 57899999999999999999864
No 395
>2ce7_A Cell division protein FTSH; metalloprotease; HET: ADP; 2.44A {Thermotoga maritima} SCOP: a.269.1.1 c.37.1.20 PDB: 2cea_A* 3kds_E*
Probab=95.64 E-value=0.0056 Score=61.26 Aligned_cols=34 Identities=15% Similarity=0.323 Sum_probs=26.5
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhccCCc--EEEeCCc
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKPLNY--TTVNRDT 305 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~~~~--~~i~~D~ 305 (369)
|.-|+|.||||+|||+++++++...+. ..++...
T Consensus 49 p~gvLL~GppGtGKT~Laraia~~~~~~f~~is~~~ 84 (476)
T 2ce7_A 49 PKGILLVGPPGTGKTLLARAVAGEANVPFFHISGSD 84 (476)
T ss_dssp CSEEEEECCTTSSHHHHHHHHHHHHTCCEEEEEGGG
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHcCCCeeeCCHHH
Confidence 445899999999999999999988654 4445443
No 396
>3tui_C Methionine import ATP-binding protein METN; ABC-transporter, type I ABC type importer, methionine uptake transporter, membrane protein; HET: ADP; 2.90A {Escherichia coli} PDB: 3tuj_C 3tuz_C* 3dhw_C
Probab=95.60 E-value=0.049 Score=52.53 Aligned_cols=23 Identities=26% Similarity=0.427 Sum_probs=20.8
Q ss_pred EEEEEEcCCCCcHHHHHHHHhcc
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKP 295 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~ 295 (369)
.++.++|++||||||+.+.+.-.
T Consensus 55 ei~~IiGpnGaGKSTLlr~i~GL 77 (366)
T 3tui_C 55 QIYGVIGASGAGKSTLIRCVNLL 77 (366)
T ss_dssp CEEEEECCTTSSHHHHHHHHHTS
T ss_pred CEEEEEcCCCchHHHHHHHHhcC
Confidence 57899999999999999999864
No 397
>1v5w_A DMC1, meiotic recombination protein DMC1/LIM15 homolog; DNA-binding protein, ring protein, octamer, AAA ATPase; 3.20A {Homo sapiens} SCOP: c.37.1.11 PDB: 2zjb_A
Probab=95.58 E-value=0.074 Score=50.59 Aligned_cols=35 Identities=11% Similarity=0.126 Sum_probs=28.4
Q ss_pred ccEEEEEEcCCCCcHHHHHHHHhcc-----------CCcEEEeCCc
Q psy4598 271 LDSVLIMIGSQGSGKSSFVSTYLKP-----------LNYTTVNRDT 305 (369)
Q Consensus 271 ~~~lIll~G~pGSGKSTla~~L~~~-----------~~~~~i~~D~ 305 (369)
...++++.|+|||||||++..++.. .++.+|+.+.
T Consensus 121 ~G~i~~I~G~~GsGKTtla~~la~~~~~~~~~gg~~~~vlyi~~E~ 166 (343)
T 1v5w_A 121 SMAITEAFGEFRTGKTQLSHTLCVTAQLPGAGGYPGGKIIFIDTEN 166 (343)
T ss_dssp SSEEEEEECCTTCTHHHHHHHHHHHTTSCBTTTBCCCEEEEEESSS
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHhcccccCCCCCeEEEEECCC
Confidence 3478999999999999999998763 2467888766
No 398
>2w0m_A SSO2452; RECA, SSPF, unknown FUN; 2.0A {Sulfolobus solfataricus P2}
Probab=95.58 E-value=0.0065 Score=53.46 Aligned_cols=33 Identities=18% Similarity=0.351 Sum_probs=25.8
Q ss_pred EEEEEEcCCCCcHHHHHHHHhcc-----CCcEEEeCCc
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKP-----LNYTTVNRDT 305 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~-----~~~~~i~~D~ 305 (369)
.++++.|+|||||||+++.++.. ..+.+++.+.
T Consensus 24 ~~~~i~G~~GsGKTtl~~~l~~~~~~~~~~v~~~~~~~ 61 (235)
T 2w0m_A 24 FFIALTGEPGTGKTIFSLHFIAKGLRDGDPCIYVTTEE 61 (235)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHHHHHHTCCEEEEESSS
T ss_pred CEEEEEcCCCCCHHHHHHHHHHHHHHCCCeEEEEEccc
Confidence 68899999999999999999843 2455666544
No 399
>4fcw_A Chaperone protein CLPB; AAA domain; HET: ADP; 2.35A {Thermus thermophilus} PDB: 4fcv_A* 4fd2_A* 4fct_A*
Probab=95.58 E-value=0.0062 Score=56.50 Aligned_cols=34 Identities=18% Similarity=0.414 Sum_probs=26.6
Q ss_pred EEEEEEcCCCCcHHHHHHHHhccC-----CcEEEeCCcc
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKPL-----NYTTVNRDTL 306 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~~-----~~~~i~~D~~ 306 (369)
..++|.|+||+|||++|+.+++.. ....++...+
T Consensus 48 ~~~ll~G~~GtGKt~la~~la~~~~~~~~~~~~~~~~~~ 86 (311)
T 4fcw_A 48 GSFLFLGPTGVGKTELAKTLAATLFDTEEAMIRIDMTEY 86 (311)
T ss_dssp EEEEEESCSSSSHHHHHHHHHHHHHSCGGGEEEEEGGGC
T ss_pred eEEEEECCCCcCHHHHHHHHHHHHcCCCcceEEeecccc
Confidence 478999999999999999999864 2455655443
No 400
>2i1q_A DNA repair and recombination protein RADA; ATPase, recombinase, ATP complex, calcium stimulation, RECA, DMC1; HET: DNA ANP; 1.90A {Methanococcus voltae} SCOP: a.60.4.1 c.37.1.11 PDB: 1xu4_A* 2b21_A* 2fpk_A* 2fpl_A* 2fpm_A* 1t4g_A* 3fyh_A* 2f1j_A* 2f1i_A* 2f1h_A* 3ntu_A* 3ewa_A* 3ew9_A* 3etl_A* 4dc9_A* 2gdj_A*
Probab=95.56 E-value=0.022 Score=53.58 Aligned_cols=23 Identities=30% Similarity=0.348 Sum_probs=20.8
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhc
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLK 294 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~ 294 (369)
..++++.|+||||||+++..++.
T Consensus 98 g~i~~i~G~~gsGKT~la~~la~ 120 (322)
T 2i1q_A 98 QSVTEFAGVFGSGKTQIMHQSCV 120 (322)
T ss_dssp TEEEEEEESTTSSHHHHHHHHHH
T ss_pred CeEEEEECCCCCCHHHHHHHHHH
Confidence 36899999999999999999874
No 401
>1htw_A HI0065; nucleotide-binding fold, structural genomics, structure 2 function project, S2F, unknown function; HET: ADP; 1.70A {Haemophilus influenzae} SCOP: c.37.1.18 PDB: 1fl9_A
Probab=95.52 E-value=0.0083 Score=50.87 Aligned_cols=26 Identities=19% Similarity=0.408 Sum_probs=22.5
Q ss_pred ccEEEEEEcCCCCcHHHHHHHHhccC
Q psy4598 271 LDSVLIMIGSQGSGKSSFVSTYLKPL 296 (369)
Q Consensus 271 ~~~lIll~G~pGSGKSTla~~L~~~~ 296 (369)
.-.++.|.|++||||||+.+.++..+
T Consensus 32 ~Ge~v~L~G~nGaGKTTLlr~l~g~l 57 (158)
T 1htw_A 32 KAIMVYLNGDLGAGKTTLTRGMLQGI 57 (158)
T ss_dssp SCEEEEEECSTTSSHHHHHHHHHHHT
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHhC
Confidence 34689999999999999999998754
No 402
>2yyz_A Sugar ABC transporter, ATP-binding protein; sugar transport, alpha and beta proteins (A/B) TM0421, structural genomics, NPPSFA; 2.11A {Thermotoga maritima}
Probab=95.45 E-value=0.067 Score=51.44 Aligned_cols=23 Identities=17% Similarity=0.372 Sum_probs=20.8
Q ss_pred EEEEEEcCCCCcHHHHHHHHhcc
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKP 295 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~ 295 (369)
.++.|.|++||||||+.+.++-.
T Consensus 30 e~~~llGpnGsGKSTLLr~iaGl 52 (359)
T 2yyz_A 30 EFVALLGPSGCGKTTTLLMLAGI 52 (359)
T ss_dssp CEEEEECSTTSSHHHHHHHHHTS
T ss_pred CEEEEEcCCCchHHHHHHHHHCC
Confidence 57899999999999999999864
No 403
>1a5t_A Delta prime, HOLB; zinc finger, DNA replication; 2.20A {Escherichia coli K12} SCOP: a.80.1.1 c.37.1.20 PDB: 1jr3_E* 1xxh_E* 1xxi_E* 3glf_E* 3glg_E* 3glh_E* 3gli_E*
Probab=95.45 E-value=0.043 Score=51.86 Aligned_cols=26 Identities=15% Similarity=0.267 Sum_probs=22.8
Q ss_pred ccEEEEEEcCCCCcHHHHHHHHhccC
Q psy4598 271 LDSVLIMIGSQGSGKSSFVSTYLKPL 296 (369)
Q Consensus 271 ~~~lIll~G~pGSGKSTla~~L~~~~ 296 (369)
.+..+++.|+||+|||++|+.+++.+
T Consensus 23 ~~~a~L~~G~~G~GKt~~a~~la~~l 48 (334)
T 1a5t_A 23 GHHALLIQALPGMGDDALIYALSRYL 48 (334)
T ss_dssp CCSEEEEECCTTSCHHHHHHHHHHHH
T ss_pred cceeEEEECCCCchHHHHHHHHHHHH
Confidence 45678999999999999999998764
No 404
>2bjv_A PSP operon transcriptional activator; AAA, transcription activation, gene regulation, sigma54 activator, enhancer binding protein, PSPF; 1.7A {Escherichia coli} PDB: 2bjw_A 2c96_A* 2c98_A* 2c99_A* 2c9c_A* 2vii_A*
Probab=95.43 E-value=0.01 Score=54.00 Aligned_cols=34 Identities=24% Similarity=0.405 Sum_probs=26.8
Q ss_pred EEEEEEcCCCCcHHHHHHHHhccC-----CcEEEeCCcc
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKPL-----NYTTVNRDTL 306 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~~-----~~~~i~~D~~ 306 (369)
.-|+|.|+||+|||++|+.+.+.. .+..++...+
T Consensus 30 ~~vll~G~~GtGKt~la~~i~~~~~~~~~~~~~v~~~~~ 68 (265)
T 2bjv_A 30 KPVLIIGERGTGKELIASRLHYLSSRWQGPFISLNCAAL 68 (265)
T ss_dssp SCEEEECCTTSCHHHHHHHHHHTSTTTTSCEEEEEGGGS
T ss_pred CCEEEECCCCCcHHHHHHHHHHhcCccCCCeEEEecCCC
Confidence 357899999999999999998864 3566665544
No 405
>3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster}
Probab=95.42 E-value=0.02 Score=54.21 Aligned_cols=104 Identities=18% Similarity=0.309 Sum_probs=69.1
Q ss_pred CCCceEEEEecCCceeecCCCCCCCCCcccc-ccccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHH
Q psy4598 22 CNSAKIASFDLDGTLITTKSGKVFPVDTHDW-KLLFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKII 100 (369)
Q Consensus 22 ~~~~k~~~fDlDgTLi~~~sg~~~~~~~~d~-~~~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l 100 (369)
....+.+.+|||+||+...+. . ..| ...-|++.+.|+.+. +.|.|+|+|... ...+..++
T Consensus 137 ~~~k~tLVLDLDeTLvh~~~~----~--~~~~~~~RP~l~eFL~~l~-~~yeivIfTas~------------~~ya~~vl 197 (320)
T 3shq_A 137 REGKKLLVLDIDYTLFDHRSP----A--ETGTELMRPYLHEFLTSAY-EDYDIVIWSATS------------MRWIEEKM 197 (320)
T ss_dssp CTTCEEEEECCBTTTBCSSSC----C--SSHHHHBCTTHHHHHHHHH-HHEEEEEECSSC------------HHHHHHHH
T ss_pred cCCCcEEEEeccccEEccccc----C--CCcceEeCCCHHHHHHHHH-hCCEEEEEcCCc------------HHHHHHHH
Confidence 345799999999999987531 1 222 235799999999998 569999999843 34567777
Q ss_pred HHcCCC----eE--EEEec-C--------CC-CCCCCchhHHHHHHHHhcCCccccCCccEEeeCcc
Q psy4598 101 KSLNVP----VQ--MFVAT-Q--------YD-RYRKPVPGMWEYLSQEKNGDLAIDISQSFYAGDAA 151 (369)
Q Consensus 101 ~~l~i~----~~--~~~~~-~--------~~-~~rKP~~gm~~~~~~~~~~~~~i~~~~s~~VGD~~ 151 (369)
+.++.. +. +|... . .. .+-|+-..+|..+ . +-+++++++|-|+.
T Consensus 198 d~Ld~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~vKdLs~Lw~~~----p---~rdl~~tIiIDdsp 257 (320)
T 3shq_A 198 RLLGVASNDNYKVMFYLDSTAMISVHVPERGVVDVKPLGVIWALY----K---QYNSSNTIMFDDIR 257 (320)
T ss_dssp HHTTCTTCSSCCCCEEECGGGCEEEEETTTEEEEECCHHHHHHHC----T---TCCGGGEEEEESCG
T ss_pred HHhCCCCCcceeEEEEEcCCccccccccCCCCEEEEEhHHhhccc----C---CCChhHEEEEeCCh
Confidence 777541 22 22211 0 01 2456655565442 1 46789999999997
No 406
>3jvv_A Twitching mobility protein; hexameric P-loop ATPase, secretion ATPase, ATP-binding, FIMB nucleotide-binding, transport; HET: ACP CIT; 2.60A {Pseudomonas aeruginosa} PDB: 3jvu_A*
Probab=95.42 E-value=0.061 Score=51.64 Aligned_cols=87 Identities=21% Similarity=0.263 Sum_probs=47.9
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhccC-----CcEEEeCCcch-----------------hHHHHHHHHHHHHhCCC-cEEE
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKPL-----NYTTVNRDTLG-----------------SWQKCVSVMKAALDSGL-SVVV 328 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~~-----~~~~i~~D~~~-----------------~~~~~~~~~~~~l~~g~-~vIi 328 (369)
..+|+++|++||||||+.+.+.... +....-.|.+. ....+...+..++...- .+++
T Consensus 123 ~g~i~I~GptGSGKTTlL~~l~g~~~~~~~~~i~t~ed~~e~~~~~~~~~v~q~~~~~~~~~~~~~La~aL~~~Pdvill 202 (356)
T 3jvv_A 123 RGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHESKKCLVNQREVHRDTLGFSEALRSALREDPDIILV 202 (356)
T ss_dssp SEEEEEECSTTSCHHHHHHHHHHHHHHHCCCEEEEEESSCCSCCCCSSSEEEEEEBTTTBSCHHHHHHHHTTSCCSEEEE
T ss_pred CCEEEEECCCCCCHHHHHHHHHhcccCCCCcEEEEccCcHHhhhhccccceeeeeeccccCCHHHHHHHHhhhCcCEEec
Confidence 3589999999999999999986542 11222222210 00112334455555544 4556
Q ss_pred eCCCCCHHHHHHHHHHHHhcCCeEEEEEEeCC
Q psy4598 329 DNTNPDKESRHRYIEAAKQHGVRCIAVHMNIS 360 (369)
Q Consensus 329 D~tn~~~~~r~~~~~la~~~~~~v~~v~l~~~ 360 (369)
|=.. +.+....+++.+. .|..+..+.-+.+
T Consensus 203 DEp~-d~e~~~~~~~~~~-~G~~vl~t~H~~~ 232 (356)
T 3jvv_A 203 GEMR-DLETIRLALTAAE-TGHLVFGTLHTTS 232 (356)
T ss_dssp SCCC-SHHHHHHHHHHHH-TTCEEEEEESCSS
T ss_pred CCCC-CHHHHHHHHHHHh-cCCEEEEEEccCh
Confidence 6554 6666666565544 4665544433333
No 407
>4g63_A Cytosolic IMP-GMP specific 5'-nucleotidase; structural genomics, PSI-biology, northeast structural genom consortium, NESG; 2.70A {Legionella pneumophila subsp} PDB: 2bde_A
Probab=95.41 E-value=0.032 Score=55.46 Aligned_cols=100 Identities=16% Similarity=0.164 Sum_probs=63.4
Q ss_pred ccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHH-HHHHHHc---C--C--CeEEEEecCC-----------
Q psy4598 55 LFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKA-EKIIKSL---N--V--PVQMFVATQY----------- 115 (369)
Q Consensus 55 ~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i-~~~l~~l---~--i--~~~~~~~~~~----------- 115 (369)
..|.++..|++|+++|.+++++|| +.-++...+ ..++... | . .|+++++...
T Consensus 187 k~~~l~~~L~~lr~~GKklFLiTN---------S~~~y~~~~M~y~~~~~~~~g~dWrdlFDvVIv~A~KP~FF~~~~~~ 257 (470)
T 4g63_A 187 REKEVVEGLKHFIRYGKKIFILTN---------SEYSYSKLLLDYALSPFLDKGEHWQGLFEFVITLANKPRFFYDNLRF 257 (470)
T ss_dssp CCHHHHHHHHHHHTTTCEEEEECS---------SCHHHHHHHHHHHTGGGSCTTCCGGGGCSEEEESCCTTHHHHSCCCE
T ss_pred CCHhHHHHHHHHHHcCCeEEEeeC---------CCchHHHHHHHhhcccCCCCCCChhhhcCEEEECCCCCCcccCCCcc
Confidence 358899999999999999999999 344555543 3333211 1 2 3776665421
Q ss_pred -------------CCCCCCc---hhHHHHHHHHhcCCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHh-CCC
Q psy4598 116 -------------DRYRKPV---PGMWEYLSQEKNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFN-LNL 178 (369)
Q Consensus 116 -------------~~~rKP~---~gm~~~~~~~~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n-~Gi 178 (369)
....+|. -|-|..+.+.. +..-.+++||||.. .+||..++. .|.
T Consensus 258 ~~v~~~~g~l~~~~~~~~~~vY~gGn~~~l~~ll----g~~g~~VLY~GDhi---------------~~Di~~~kk~~gW 318 (470)
T 4g63_A 258 LSVNPENGTMTNVHGPIVPGVYQGGNAKKFTEDL----GVGGDEILYIGDHI---------------YGDILRLKKDCNW 318 (470)
T ss_dssp EEECTTTCCEEECCSSCCSEEEEECCHHHHHHHT----TCCGGGEEEEESCC---------------CSCHHHHHHSCCC
T ss_pred eEEECCCCcccccccccCCceeecCcHHHHHHHh----CCCCCeEEEECCch---------------HHHHHhhhhccCC
Confidence 0011121 33455555542 45567899999998 489877764 688
Q ss_pred CccC
Q psy4598 179 AFFT 182 (369)
Q Consensus 179 ~f~~ 182 (369)
++..
T Consensus 319 rT~~ 322 (470)
T 4g63_A 319 RTAL 322 (470)
T ss_dssp EEEE
T ss_pred eEEE
Confidence 8843
No 408
>1z47_A CYSA, putative ABC-transporter ATP-binding protein; alpha/beta motif, beta sandwich, ligand binding protein; 1.90A {Alicyclobacillus acidocaldarius}
Probab=95.41 E-value=0.061 Score=51.64 Aligned_cols=23 Identities=22% Similarity=0.429 Sum_probs=20.7
Q ss_pred EEEEEEcCCCCcHHHHHHHHhcc
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKP 295 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~ 295 (369)
.++.|.|++||||||+.+.++-.
T Consensus 42 e~~~llGpnGsGKSTLLr~iaGl 64 (355)
T 1z47_A 42 EMVGLLGPSGSGKTTILRLIAGL 64 (355)
T ss_dssp CEEEEECSTTSSHHHHHHHHHTS
T ss_pred CEEEEECCCCCcHHHHHHHHhCC
Confidence 57899999999999999999854
No 409
>1xp8_A RECA protein, recombinase A; recombination, radioresistance, DNA-repair, ATPase, DNA-BIND protein, DNA binding protein; HET: AGS; 2.50A {Deinococcus radiodurans} SCOP: c.37.1.11 d.48.1.1
Probab=95.40 E-value=0.024 Score=54.66 Aligned_cols=33 Identities=9% Similarity=0.256 Sum_probs=27.5
Q ss_pred EEEEEEcCCCCcHHHHHHHHhcc-----CCcEEEeCCc
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKP-----LNYTTVNRDT 305 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~-----~~~~~i~~D~ 305 (369)
.++++.|+||||||||+..++.. ..+.+++.+.
T Consensus 75 ~li~I~G~pGsGKTtlal~la~~~~~~g~~vlyi~~E~ 112 (366)
T 1xp8_A 75 RITEIYGPESGGKTTLALAIVAQAQKAGGTCAFIDAEH 112 (366)
T ss_dssp SEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred cEEEEEcCCCCChHHHHHHHHHHHHHCCCeEEEEECCC
Confidence 57899999999999999998764 3578888765
No 410
>2r44_A Uncharacterized protein; putative ATPase, structural genomics, joint center for struc genomics, JCSG; HET: MSE PG4; 2.00A {Cytophaga hutchinsonii atcc 33406}
Probab=95.38 E-value=0.0064 Score=57.23 Aligned_cols=24 Identities=25% Similarity=0.387 Sum_probs=21.7
Q ss_pred EEEEEcCCCCcHHHHHHHHhccCC
Q psy4598 274 VLIMIGSQGSGKSSFVSTYLKPLN 297 (369)
Q Consensus 274 lIll~G~pGSGKSTla~~L~~~~~ 297 (369)
-++|.|+||+|||++++.+++.++
T Consensus 48 ~vll~G~pGtGKT~la~~la~~~~ 71 (331)
T 2r44_A 48 HILLEGVPGLAKTLSVNTLAKTMD 71 (331)
T ss_dssp CEEEESCCCHHHHHHHHHHHHHTT
T ss_pred eEEEECCCCCcHHHHHHHHHHHhC
Confidence 479999999999999999998764
No 411
>2z43_A DNA repair and recombination protein RADA; archaea, filament, DNA binding, molecular SWI RECA, DMC1; HET: DNA; 1.93A {Sulfolobus solfataricus} PDB: 2bke_A* 2dfl_A* 2zub_A* 2zuc_A* 2zud_A*
Probab=95.38 E-value=0.034 Score=52.44 Aligned_cols=34 Identities=15% Similarity=0.218 Sum_probs=27.8
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhcc-----------CCcEEEeCCc
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKP-----------LNYTTVNRDT 305 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~-----------~~~~~i~~D~ 305 (369)
..++++.|+|||||||++..++.. .++.+++.+.
T Consensus 107 G~i~~i~G~~GsGKT~la~~la~~~~~~~~~gg~~~~vlyi~~e~ 151 (324)
T 2z43_A 107 RTMTEFFGEFGSGKTQLCHQLSVNVQLPPEKGGLSGKAVYIDTEG 151 (324)
T ss_dssp TSEEEEEESTTSSHHHHHHHHHHHTTSCGGGTCCSCEEEEEESSS
T ss_pred CcEEEEECCCCCCHhHHHHHHHHHHhcccccCCCCCeEEEEECCC
Confidence 368999999999999999998753 2467888775
No 412
>3cf2_A TER ATPase, transitional endoplasmic reticulum ATPase, valosi; AAA, CDC48, ERAD, transport protein; HET: ADP ANP; 3.50A {Mus musculus} PDB: 3cf1_A* 3cf3_A* 1r7r_A*
Probab=95.37 E-value=0.018 Score=61.07 Aligned_cols=34 Identities=12% Similarity=0.215 Sum_probs=29.6
Q ss_pred ccEEEEEEcCCCCcHHHHHHHHhccCCcEEEeCC
Q psy4598 271 LDSVLIMIGSQGSGKSSFVSTYLKPLNYTTVNRD 304 (369)
Q Consensus 271 ~~~lIll~G~pGSGKSTla~~L~~~~~~~~i~~D 304 (369)
.++=|+|.||||+|||.+|++++...+..+++.+
T Consensus 510 ~~~gvLl~GPPGtGKT~lAkaiA~e~~~~f~~v~ 543 (806)
T 3cf2_A 510 PSKGVLFYGPPGCGKTLLAKAIANECQANFISIK 543 (806)
T ss_dssp CCSCCEEESSTTSSHHHHHHHHHHTTTCEEEECC
T ss_pred CCceEEEecCCCCCchHHHHHHHHHhCCceEEec
Confidence 3456899999999999999999999988888754
No 413
>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*
Probab=95.34 E-value=0.01 Score=56.42 Aligned_cols=24 Identities=13% Similarity=0.487 Sum_probs=18.6
Q ss_pred ccccHHHHHHHHHHCCcEEEEEec
Q psy4598 55 LFSNIESVLKQYLDDGYKLVIFTN 78 (369)
Q Consensus 55 ~~p~v~~~L~~L~~~G~~i~i~TN 78 (369)
+||++.+.|+.|+++|+.++|||-
T Consensus 144 ~~~~~~~l~~~l~~~G~~v~ivSa 167 (327)
T 4as2_A 144 VFSGQRELYNKLMENGIEVYVISA 167 (327)
T ss_dssp ECHHHHHHHHHHHHTTCEEEEEEE
T ss_pred cCHHHHHHHHHHHHCCCEEEEEeC
Confidence 567777888888888888888876
No 414
>4dhe_A Probable GTP-binding protein ENGB; melioidosis, RAS-like GTPase, cell division, cell cycle, SEP GTP-binding; 2.20A {Burkholderia thailandensis}
Probab=95.33 E-value=0.08 Score=46.10 Aligned_cols=90 Identities=16% Similarity=0.199 Sum_probs=51.2
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhccC-------------CcEEEeCC-----cc------h--h-------HHHHHHHHHH
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKPL-------------NYTTVNRD-----TL------G--S-------WQKCVSVMKA 318 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~~-------------~~~~i~~D-----~~------~--~-------~~~~~~~~~~ 318 (369)
..-|+++|.+|+|||||...|.... ........ .+ + . ..........
T Consensus 29 ~~~i~v~G~~~~GKSslin~l~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~l~DtpG~~~~~~~~~~~~~~~~~~~~ 108 (223)
T 4dhe_A 29 QPEIAFAGRSNAGKSTAINVLCNQKRLAFASKTPGRTQHINYFSVGPAAEPVAHLVDLPGYGYAEVPGAAKAHWEQLLSS 108 (223)
T ss_dssp SCEEEEEESCHHHHHHHHHHHTTCSSSSCTTCCCCSCCCEEEEEESCTTSCSEEEEECCCCCSSCCCSTHHHHHHHHHHH
T ss_pred CCEEEEEcCCCCCHHHHHHHHhCCCcceeecCCCCcccceEEEEecCCCCCcEEEEcCCCCCcccCChhhHHHHHHHHHH
Confidence 3568899999999999999997642 01111111 00 0 0 1222233333
Q ss_pred HHhCC-----CcEEEeCCCCCHHHHHHHHHHHHhcCCeEEEEEEeCCH
Q psy4598 319 ALDSG-----LSVVVDNTNPDKESRHRYIEAAKQHGVRCIAVHMNISK 361 (369)
Q Consensus 319 ~l~~g-----~~vIiD~tn~~~~~r~~~~~la~~~~~~v~~v~l~~~~ 361 (369)
.+... ..+|+|.+.........+....+..+.++.+|.-.++.
T Consensus 109 ~~~~~~~~d~vi~v~d~~~~~~~~~~~~~~~l~~~~~p~i~v~nK~Dl 156 (223)
T 4dhe_A 109 YLQTRPQLCGMILMMDARRPLTELDRRMIEWFAPTGKPIHSLLTKCDK 156 (223)
T ss_dssp HHHHCTTEEEEEEEEETTSCCCHHHHHHHHHHGGGCCCEEEEEECGGG
T ss_pred HHhcCcCcCEEEEEEeCCCCCCHHHHHHHHHHHhcCCCEEEEEecccc
Confidence 33322 34678887653344455666667778887776665553
No 415
>1ly1_A Polynucleotide kinase; PNK, phosphatase, transferase; 2.00A {Enterobacteria phage T4} SCOP: c.37.1.1
Probab=95.33 E-value=0.0041 Score=52.64 Aligned_cols=36 Identities=28% Similarity=0.646 Sum_probs=28.8
Q ss_pred eEEEEEcCCCCCcchhhhhccC-CCcccccccccccc
Q psy4598 224 QVLIMIGSQGSGKSSFVSTYLK-PLNYTTVNRDTLGS 259 (369)
Q Consensus 224 ~i~v~~g~~~~gks~~~~~~~~-~~~~~~i~r~~~~~ 259 (369)
.+++++|+|||||||+++.+.. ..++..++.|.++.
T Consensus 3 ~~I~i~G~~GsGKST~a~~L~~~~~~~~~i~~d~~r~ 39 (181)
T 1ly1_A 3 KIILTIGCPGSGKSTWAREFIAKNPGFYNINRDDYRQ 39 (181)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHSTTEEEECHHHHHH
T ss_pred eEEEEecCCCCCHHHHHHHHHhhcCCcEEecHHHHHH
Confidence 5788999999999999998765 46777777766543
No 416
>2q6t_A DNAB replication FORK helicase; hydrolase; 2.90A {Thermus aquaticus}
Probab=95.29 E-value=0.077 Score=52.28 Aligned_cols=32 Identities=19% Similarity=0.254 Sum_probs=25.8
Q ss_pred EEEEEEcCCCCcHHHHHHHHhcc------CCcEEEeCC
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKP------LNYTTVNRD 304 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~------~~~~~i~~D 304 (369)
.+++++|+||+|||||+..++.. .++.+++..
T Consensus 201 ~l~ii~G~pg~GKT~lal~ia~~~a~~~g~~vl~~slE 238 (444)
T 2q6t_A 201 SLNIIAARPAMGKTAFALTIAQNAALKEGVGVGIYSLE 238 (444)
T ss_dssp CEEEEEECTTSCHHHHHHHHHHHHHHTTCCCEEEEESS
T ss_pred cEEEEEeCCCCCHHHHHHHHHHHHHHhCCCeEEEEECC
Confidence 68999999999999999998753 246677664
No 417
>3hu3_A Transitional endoplasmic reticulum ATPase; VCP, transport protein; HET: AGS; 2.20A {Homo sapiens} PDB: 3hu2_A* 3hu1_A* 1e32_A* 1s3s_A*
Probab=95.29 E-value=0.012 Score=59.16 Aligned_cols=33 Identities=12% Similarity=0.143 Sum_probs=26.9
Q ss_pred cccEEEEEEcCCCCcHHHHHHHHhccCCcEEEe
Q psy4598 270 ALDSVLIMIGSQGSGKSSFVSTYLKPLNYTTVN 302 (369)
Q Consensus 270 ~~~~lIll~G~pGSGKSTla~~L~~~~~~~~i~ 302 (369)
..+.-|+|.|+||+|||++|++++...+..++.
T Consensus 236 ~~~~~vLL~GppGtGKT~lAraia~~~~~~fv~ 268 (489)
T 3hu3_A 236 KPPRGILLYGPPGTGKTLIARAVANETGAFFFL 268 (489)
T ss_dssp CCCCEEEEECSTTSSHHHHHHHHHHHCSSEEEE
T ss_pred CCCCcEEEECcCCCCHHHHHHHHHHHhCCCEEE
Confidence 345678999999999999999999987655443
No 418
>1v43_A Sugar-binding transport ATP-binding protein; ATPase, active transport, sugar uptake and regulation, transport protein; 2.20A {Pyrococcus horikoshii} SCOP: b.40.6.3 b.40.6.3 c.37.1.12 PDB: 1vci_A*
Probab=95.24 E-value=0.058 Score=52.16 Aligned_cols=23 Identities=22% Similarity=0.482 Sum_probs=20.7
Q ss_pred EEEEEEcCCCCcHHHHHHHHhcc
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKP 295 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~ 295 (369)
.++.|.|++||||||+.+.++-.
T Consensus 38 e~~~llGpnGsGKSTLLr~iaGl 60 (372)
T 1v43_A 38 EFLVLLGPSGCGKTTTLRMIAGL 60 (372)
T ss_dssp CEEEEECCTTSSHHHHHHHHHTS
T ss_pred CEEEEECCCCChHHHHHHHHHcC
Confidence 57899999999999999999854
No 419
>2eyu_A Twitching motility protein PILT; pilus retraction motor, C-terminal domain PILT, protein transport; 1.87A {Aquifex aeolicus}
Probab=95.23 E-value=0.011 Score=54.33 Aligned_cols=81 Identities=20% Similarity=0.286 Sum_probs=46.3
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhccC-----CcEEEeCCcchh---------H--------HHHHHHHHHHHh-CCCcEEE
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKPL-----NYTTVNRDTLGS---------W--------QKCVSVMKAALD-SGLSVVV 328 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~~-----~~~~i~~D~~~~---------~--------~~~~~~~~~~l~-~g~~vIi 328 (369)
..++.++|++||||||+.+.+...+ +-..+..+.+.. . ..+...+..++. ....+++
T Consensus 25 g~~v~i~Gp~GsGKSTll~~l~g~~~~~~~G~I~~~g~~i~~~~~~~~~~v~q~~~gl~~~~l~~~la~aL~~~p~illl 104 (261)
T 2eyu_A 25 MGLILVTGPTGSGKSTTIASMIDYINQTKSYHIITIEDPIEYVFKHKKSIVNQREVGEDTKSFADALRAALREDPDVIFV 104 (261)
T ss_dssp SEEEEEECSTTCSHHHHHHHHHHHHHHHCCCEEEEEESSCCSCCCCSSSEEEEEEBTTTBSCHHHHHHHHHHHCCSEEEE
T ss_pred CCEEEEECCCCccHHHHHHHHHHhCCCCCCCEEEEcCCcceeecCCcceeeeHHHhCCCHHHHHHHHHHHHhhCCCEEEe
Confidence 3689999999999999999987632 333343333210 0 011223333333 3445666
Q ss_pred eCCCCCHHHHHHHHHHHHhcCCeEEE
Q psy4598 329 DNTNPDKESRHRYIEAAKQHGVRCIA 354 (369)
Q Consensus 329 D~tn~~~~~r~~~~~la~~~~~~v~~ 354 (369)
|-.. +.+....+++.+ ..|..+..
T Consensus 105 DEp~-D~~~~~~~l~~~-~~g~~vl~ 128 (261)
T 2eyu_A 105 GEMR-DLETVETALRAA-ETGHLVFG 128 (261)
T ss_dssp SCCC-SHHHHHHHHHHH-HTTCEEEE
T ss_pred CCCC-CHHHHHHHHHHH-ccCCEEEE
Confidence 7655 777776666655 34554433
No 420
>3tif_A Uncharacterized ABC transporter ATP-binding prote; nucleotide-binding domain, ABC transporter ATPase; HET: ADP; 1.80A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID} PDB: 1l2t_A* 1f3o_A*
Probab=95.22 E-value=0.0092 Score=53.90 Aligned_cols=23 Identities=26% Similarity=0.411 Sum_probs=20.9
Q ss_pred EEEEEEcCCCCcHHHHHHHHhcc
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKP 295 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~ 295 (369)
.++.++|++||||||+.+.++-.
T Consensus 32 e~~~iiG~nGsGKSTLl~~l~Gl 54 (235)
T 3tif_A 32 EFVSIMGPSGSGKSTMLNIIGCL 54 (235)
T ss_dssp CEEEEECSTTSSHHHHHHHHTTS
T ss_pred CEEEEECCCCCcHHHHHHHHhcC
Confidence 57899999999999999999864
No 421
>4dcu_A GTP-binding protein ENGA; GTPase, GDP, protein binding, hydrolase; HET: GDP; 2.00A {Bacillus subtilis} PDB: 4dct_A* 4dcs_A* 4dcv_A* 2hjg_A*
Probab=95.18 E-value=0.085 Score=52.13 Aligned_cols=89 Identities=13% Similarity=0.182 Sum_probs=52.3
Q ss_pred EEEEEEcCCCCcHHHHHHHHhccCC-----cEEEeCCcc-----------------h-------hHHHHHHHHHHHHhCC
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKPLN-----YTTVNRDTL-----------------G-------SWQKCVSVMKAALDSG 323 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~~~-----~~~i~~D~~-----------------~-------~~~~~~~~~~~~l~~g 323 (369)
..|+|+|.||+|||||..+|....- ..-+..|.. + ..+.+...+..+++.-
T Consensus 24 ~~V~lvG~~nvGKSTL~n~l~~~~~~~v~~~~g~t~~~~~~~~~~~~~~~~liDT~G~~~~~~~~~~~~~~~~~~~~~~a 103 (456)
T 4dcu_A 24 PVVAIVGRPNVGKSTIFNRIAGERISIVEDTPGVTRDRIYSSAEWLNYDFNLIDTGGIDIGDEPFLAQIRQQAEIAMDEA 103 (456)
T ss_dssp CEEEEECSSSSSHHHHHHHHEEEEEC-----------CEEEECTTCSSCCEEECCCC------CCHHHHHHHHHHHHHHC
T ss_pred CEEEEECCCCCcHHHHHHHHhCCCCcccCCCCCcceeEEEEEEEECCceEEEEECCCCCCcchHHHHHHHHHHHhhHhhC
Confidence 5799999999999999999976420 011111110 0 0233444455555433
Q ss_pred --CcEEEeCCCCCHHHHHHHHHHHHhcCCeEEEEEEeCCH
Q psy4598 324 --LSVVVDNTNPDKESRHRYIEAAKQHGVRCIAVHMNISK 361 (369)
Q Consensus 324 --~~vIiD~tn~~~~~r~~~~~la~~~~~~v~~v~l~~~~ 361 (369)
..+|+|...........+.+..++.+.++.++.=.++.
T Consensus 104 d~il~VvD~~~~~~~~d~~l~~~l~~~~~pvilV~NK~D~ 143 (456)
T 4dcu_A 104 DVIIFMVNGREGVTAADEEVAKILYRTKKPVVLAVNKLDN 143 (456)
T ss_dssp SEEEEEEESSSCSCHHHHHHHHHHTTCCSCEEEEEECC--
T ss_pred CEEEEEEeCCCCCChHHHHHHHHHHHcCCCEEEEEECccc
Confidence 35568887644444556677777788888777666664
No 422
>4gp7_A Metallophosphoesterase; polynucleotide kinase phosphatase, RNA repair, transferase; HET: ATP CIT; 2.00A {Clostridium thermocellum} PDB: 4gp6_A*
Probab=95.17 E-value=0.024 Score=48.19 Aligned_cols=36 Identities=28% Similarity=0.457 Sum_probs=27.9
Q ss_pred CCceEEEEEcCCCCCcchhhhhccCCCccccccccccc
Q psy4598 221 DKKQVLIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTLG 258 (369)
Q Consensus 221 ~~~~i~v~~g~~~~gks~~~~~~~~~~~~~~i~r~~~~ 258 (369)
.+.+++.++|++||||||+++.++ .++..++.|.++
T Consensus 7 ~~gei~~l~G~nGsGKSTl~~~~~--~~~~~~~~d~~~ 42 (171)
T 4gp7_A 7 PELSLVVLIGSSGSGKSTFAKKHF--KPTEVISSDFCR 42 (171)
T ss_dssp ESSEEEEEECCTTSCHHHHHHHHS--CGGGEEEHHHHH
T ss_pred CCCEEEEEECCCCCCHHHHHHHHc--cCCeEEccHHHH
Confidence 467899999999999999999765 355556655554
No 423
>2dhr_A FTSH; AAA+ protein, hexameric Zn metalloprotease, hydrolase; HET: ADP; 3.90A {Thermus thermophilus}
Probab=95.17 E-value=0.0091 Score=60.09 Aligned_cols=33 Identities=15% Similarity=0.384 Sum_probs=26.2
Q ss_pred EEEEEcCCCCcHHHHHHHHhccCC--cEEEeCCcc
Q psy4598 274 VLIMIGSQGSGKSSFVSTYLKPLN--YTTVNRDTL 306 (369)
Q Consensus 274 lIll~G~pGSGKSTla~~L~~~~~--~~~i~~D~~ 306 (369)
=|+|.|+|||||||++++++...+ ...++...+
T Consensus 66 GvLL~GppGtGKTtLaraIa~~~~~~~i~i~g~~~ 100 (499)
T 2dhr_A 66 GVLLVGPPGVGKTHLARAVAGEARVPFITASGSDF 100 (499)
T ss_dssp EEEEECSSSSSHHHHHHHHHHHTTCCEEEEEGGGG
T ss_pred eEEEECCCCCCHHHHHHHHHHHhCCCEEEEehhHH
Confidence 389999999999999999998764 455555443
No 424
>1cr0_A DNA primase/helicase; RECA-type protein fold, transferase; HET: DNA; 2.30A {Enterobacteria phage T7} SCOP: c.37.1.11 PDB: 1cr1_A* 1cr2_A* 1cr4_A* 1e0j_A* 1e0k_A*
Probab=95.10 E-value=0.011 Score=54.92 Aligned_cols=23 Identities=30% Similarity=0.502 Sum_probs=20.6
Q ss_pred EEEEEEcCCCCcHHHHHHHHhcc
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKP 295 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~ 295 (369)
.+++|+|+||||||||++.++..
T Consensus 36 ~~~~i~G~~G~GKTTl~~~ia~~ 58 (296)
T 1cr0_A 36 EVIMVTSGSGMGKSTFVRQQALQ 58 (296)
T ss_dssp CEEEEEESTTSSHHHHHHHHHHH
T ss_pred eEEEEEeCCCCCHHHHHHHHHHH
Confidence 58999999999999999998753
No 425
>2qen_A Walker-type ATPase; unknown function; HET: ADP; 2.25A {Pyrococcus abyssi}
Probab=95.08 E-value=0.017 Score=54.03 Aligned_cols=32 Identities=19% Similarity=0.368 Sum_probs=28.1
Q ss_pred EEEEEEcCCCCcHHHHHHHHhccCCcEEEeCC
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKPLNYTTVNRD 304 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~~~~~~i~~D 304 (369)
.++++.|++|+||||+++.+.+..++.+++..
T Consensus 32 ~~v~i~G~~G~GKT~Ll~~~~~~~~~~~~~~~ 63 (350)
T 2qen_A 32 PLTLLLGIRRVGKSSLLRAFLNERPGILIDCR 63 (350)
T ss_dssp SEEEEECCTTSSHHHHHHHHHHHSSEEEEEHH
T ss_pred CeEEEECCCcCCHHHHHHHHHHHcCcEEEEee
Confidence 58999999999999999999988777777754
No 426
>1ypw_A Transitional endoplasmic reticulum ATPase; AAA, P97/VCP, ERAD, CDC48; HET: ADP ANP; 3.50A {Mus musculus} PDB: 1oz4_A* 1yq0_A* 1yqi_A* 1r7r_A* 3cf2_A* 3cf1_A* 3cf3_A*
Probab=95.07 E-value=0.014 Score=62.27 Aligned_cols=33 Identities=12% Similarity=0.143 Sum_probs=27.3
Q ss_pred cccEEEEEEcCCCCcHHHHHHHHhccCCcEEEe
Q psy4598 270 ALDSVLIMIGSQGSGKSSFVSTYLKPLNYTTVN 302 (369)
Q Consensus 270 ~~~~lIll~G~pGSGKSTla~~L~~~~~~~~i~ 302 (369)
..+.-|+|+|+|||||||+++.++...+..++.
T Consensus 236 ~~~~~vLL~Gp~GtGKTtLarala~~l~~~~i~ 268 (806)
T 1ypw_A 236 KPPRGILLYGPPGTGKTLIARAVANETGAFFFL 268 (806)
T ss_dssp CCCCEEEECSCTTSSHHHHHHHHHHTTTCEEEE
T ss_pred CCCCeEEEECcCCCCHHHHHHHHHHHcCCcEEE
Confidence 345679999999999999999999987655443
No 427
>2pcj_A ABC transporter, lipoprotein-releasing system ATP-binding protein; structural genomics; 1.70A {Aquifex aeolicus} PDB: 2pcl_A
Probab=95.05 E-value=0.01 Score=53.09 Aligned_cols=23 Identities=30% Similarity=0.429 Sum_probs=20.7
Q ss_pred EEEEEEcCCCCcHHHHHHHHhcc
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKP 295 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~ 295 (369)
.++.++|++||||||+.+.++-.
T Consensus 31 e~~~iiG~nGsGKSTLl~~l~Gl 53 (224)
T 2pcj_A 31 EFVSIIGASGSGKSTLLYILGLL 53 (224)
T ss_dssp CEEEEEECTTSCHHHHHHHHTTS
T ss_pred CEEEEECCCCCCHHHHHHHHhcC
Confidence 57899999999999999999754
No 428
>2r6a_A DNAB helicase, replicative helicase; replication, DNAB; 2.90A {Geobacillus stearothermophilus} PDB: 2r6c_A 2r6d_A 2r6e_A 2vyf_A 2vye_A
Probab=95.04 E-value=0.092 Score=51.90 Aligned_cols=33 Identities=15% Similarity=0.287 Sum_probs=26.2
Q ss_pred EEEEEEcCCCCcHHHHHHHHhcc----C--CcEEEeCCc
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKP----L--NYTTVNRDT 305 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~----~--~~~~i~~D~ 305 (369)
.++++.|+||+|||||+..++.. . ++.+++.+.
T Consensus 204 ~liiI~G~pG~GKTtl~l~ia~~~~~~~g~~Vl~~s~E~ 242 (454)
T 2r6a_A 204 DLIIVAARPSVGKTAFALNIAQNVATKTNENVAIFSLEM 242 (454)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHHHHHSSCCEEEEESSS
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 68999999999999999998763 1 466776553
No 429
>3iev_A GTP-binding protein ERA; ERA, GTPase, KH domain, anti-SD, 16S rRNA, 30S ribosome ASSE GTP-binding, nucleotide-binding; HET: GNP; 1.90A {Aquifex aeolicus} PDB: 3r9w_A* 3r9x_A*
Probab=95.03 E-value=0.16 Score=47.49 Aligned_cols=93 Identities=18% Similarity=0.228 Sum_probs=54.8
Q ss_pred cccccEEEEEEcCCCCcHHHHHHHHhccC--------C------cEEEeCC-cc--------h--------h-HHHHHHH
Q psy4598 268 KAALDSVLIMIGSQGSGKSSFVSTYLKPL--------N------YTTVNRD-TL--------G--------S-WQKCVSV 315 (369)
Q Consensus 268 ~~~~~~lIll~G~pGSGKSTla~~L~~~~--------~------~~~i~~D-~~--------~--------~-~~~~~~~ 315 (369)
.++.+-.|.++|.||+|||||..+|.... + ..++..+ .. + . -+.+...
T Consensus 6 ~~~~~g~v~ivG~~nvGKSTLin~l~g~~~~i~s~~~~tT~~~~~~~~~~~~~~~i~lvDTPG~~~~~~~~~l~~~~~~~ 85 (308)
T 3iev_A 6 HHMKVGYVAIVGKPNVGKSTLLNNLLGTKVSIISPKAGTTRMRVLGVKNIPNEAQIIFLDTPGIYEPKKSDVLGHSMVEI 85 (308)
T ss_dssp -CCEEEEEEEECSTTSSHHHHHHHHHTSCCSCCCSSSCCCCSCEEEEEEETTTEEEEEEECCCCCCCCTTCHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCCcHHHHHHHHhCCCccccCCCCCceeeEEEEEEecCCCCeEEEEECcCCCccccchhHHHHHHHH
Confidence 44455789999999999999999997531 0 0111111 11 0 0 1233344
Q ss_pred HHHHHhCC--CcEEEeCCCC-CHHHHHHHHHHHHhcCCeEEEEEEeCC
Q psy4598 316 MKAALDSG--LSVVVDNTNP-DKESRHRYIEAAKQHGVRCIAVHMNIS 360 (369)
Q Consensus 316 ~~~~l~~g--~~vIiD~tn~-~~~~r~~~~~la~~~~~~v~~v~l~~~ 360 (369)
+...+..- ..+|+|.+.. +......|++.++..+.++.++.=.++
T Consensus 86 ~~~~l~~aD~il~VvD~~~~~~~~~~~~~~~~l~~~~~pvilV~NK~D 133 (308)
T 3iev_A 86 AKQSLEEADVILFMIDATEGWRPRDEEIYQNFIKPLNKPVIVVINKID 133 (308)
T ss_dssp HHHHHHHCSEEEEEEETTTBSCHHHHHHHHHHTGGGCCCEEEEEECGG
T ss_pred HHHHhhcCCEEEEEEeCCCCCCchhHHHHHHHHHhcCCCEEEEEECcc
Confidence 44455433 3567898864 555666557777777788766655444
No 430
>3m6a_A ATP-dependent protease LA 1; alpha, beta, ATP-binding, hydrolase, nucleotide-binding, Pro serine protease, stress response; HET: ADP; 3.40A {Bacillus subtilis} PDB: 1x37_A
Probab=95.02 E-value=0.012 Score=59.70 Aligned_cols=26 Identities=31% Similarity=0.567 Sum_probs=23.1
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhccCC
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKPLN 297 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~~~ 297 (369)
...++|.||||+||||+++.++..++
T Consensus 108 g~~vll~Gp~GtGKTtlar~ia~~l~ 133 (543)
T 3m6a_A 108 GPILCLAGPPGVGKTSLAKSIAKSLG 133 (543)
T ss_dssp SCEEEEESSSSSSHHHHHHHHHHHHT
T ss_pred CCEEEEECCCCCCHHHHHHHHHHhcC
Confidence 45789999999999999999998764
No 431
>3bgw_A DNAB-like replicative helicase; ATPase, replication; 3.91A {Bacillus phage SPP1}
Probab=94.98 E-value=0.058 Score=53.34 Aligned_cols=32 Identities=13% Similarity=0.225 Sum_probs=25.9
Q ss_pred EEEEEEcCCCCcHHHHHHHHhccC-----CcEEEeCC
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKPL-----NYTTVNRD 304 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~~-----~~~~i~~D 304 (369)
.++++.|.||+|||||+..++... ++.+++.+
T Consensus 198 ~liiIaG~pG~GKTtlal~ia~~~a~~g~~vl~fSlE 234 (444)
T 3bgw_A 198 NFVLIAARPSMGKTAFALKQAKNMSDNDDVVNLHSLE 234 (444)
T ss_dssp CEEEEEECSSSSHHHHHHHHHHHHHHTTCEEEEECSS
T ss_pred cEEEEEeCCCCChHHHHHHHHHHHHHcCCEEEEEECC
Confidence 689999999999999999987642 45666654
No 432
>2wsm_A Hydrogenase expression/formation protein (HYPB); metal binding protein; 2.30A {Archaeoglobus fulgidus}
Probab=94.98 E-value=0.018 Score=50.45 Aligned_cols=36 Identities=17% Similarity=0.322 Sum_probs=27.5
Q ss_pred cccEEEEEEcCCCCcHHHHHHHHhccC----CcEEEeCCc
Q psy4598 270 ALDSVLIMIGSQGSGKSSFVSTYLKPL----NYTTVNRDT 305 (369)
Q Consensus 270 ~~~~lIll~G~pGSGKSTla~~L~~~~----~~~~i~~D~ 305 (369)
.....|+++|.+||||||+...|.... ....++.|.
T Consensus 28 ~~~~~i~i~G~~g~GKTTl~~~l~~~~~~~~~~~~i~~d~ 67 (221)
T 2wsm_A 28 SGTVAVNIMGAIGSGKTLLIERTIERIGNEVKIGAMLGDV 67 (221)
T ss_dssp HTCEEEEEEECTTSCHHHHHHHHHHHHTTTSCEEEEECSC
T ss_pred cCceEEEEEcCCCCCHHHHHHHHHHHhccCCeEEEEecCC
Confidence 345789999999999999999998652 345566554
No 433
>2i3b_A HCR-ntpase, human cancer-related ntpase; AAA, rossmann, hydrolase; NMR {Homo sapiens} SCOP: c.37.1.11
Probab=94.98 E-value=0.011 Score=51.72 Aligned_cols=22 Identities=18% Similarity=0.430 Sum_probs=19.6
Q ss_pred EEEEEcCCCCcHHHHHHHHhcc
Q psy4598 274 VLIMIGSQGSGKSSFVSTYLKP 295 (369)
Q Consensus 274 lIll~G~pGSGKSTla~~L~~~ 295 (369)
.+.++|++||||||+.+.++..
T Consensus 3 ~i~i~G~nG~GKTTll~~l~g~ 24 (189)
T 2i3b_A 3 HVFLTGPPGVGKTTLIHKASEV 24 (189)
T ss_dssp CEEEESCCSSCHHHHHHHHHHH
T ss_pred EEEEECCCCChHHHHHHHHHhh
Confidence 5789999999999999998764
No 434
>2cbz_A Multidrug resistance-associated protein 1; ABC proteins, MRP1/ABCC1, nucleotide-binding domain, ATP- binding, hydrolysis, transport; HET: ATP; 1.5A {Homo sapiens}
Probab=94.93 E-value=0.012 Score=53.07 Aligned_cols=24 Identities=33% Similarity=0.657 Sum_probs=21.4
Q ss_pred EEEEEEcCCCCcHHHHHHHHhccC
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKPL 296 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~~ 296 (369)
.++.|+|++||||||+.+.++...
T Consensus 32 e~~~i~G~nGsGKSTLl~~l~Gl~ 55 (237)
T 2cbz_A 32 ALVAVVGQVGCGKSSLLSALLAEM 55 (237)
T ss_dssp CEEEEECSTTSSHHHHHHHHTTCS
T ss_pred CEEEEECCCCCCHHHHHHHHhcCC
Confidence 578999999999999999998653
No 435
>1nlf_A Regulatory protein REPA; replicative DNA helicase structural changes, replication; 1.95A {Escherichia coli} SCOP: c.37.1.11 PDB: 1g8y_A 1olo_A
Probab=94.87 E-value=0.013 Score=53.81 Aligned_cols=22 Identities=23% Similarity=0.336 Sum_probs=19.7
Q ss_pred EEEEEEcCCCCcHHHHHHHHhc
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLK 294 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~ 294 (369)
.+++|.|+||||||||+..++.
T Consensus 31 ~i~~i~G~~GsGKTtl~~~l~~ 52 (279)
T 1nlf_A 31 TVGALVSPGGAGKSMLALQLAA 52 (279)
T ss_dssp SEEEEEESTTSSHHHHHHHHHH
T ss_pred CEEEEEcCCCCCHHHHHHHHHH
Confidence 4789999999999999998874
No 436
>2v9p_A Replication protein E1; AAA+ molecular motor, DNA replication, DNA translocation, nucleotide-binding, DNA-binding; 3.00A {Bovine papillomavirus type 1} PDB: 2gxa_A*
Probab=94.86 E-value=0.014 Score=54.94 Aligned_cols=25 Identities=28% Similarity=0.501 Sum_probs=22.0
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhccC
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKPL 296 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~~ 296 (369)
-.++.|+|++|||||||.+.|...+
T Consensus 126 Ge~vaIvGpsGsGKSTLl~lL~gl~ 150 (305)
T 2v9p_A 126 KNCLAFIGPPNTGKSMLCNSLIHFL 150 (305)
T ss_dssp CSEEEEECSSSSSHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCcHHHHHHHHhhhc
Confidence 4688999999999999999998654
No 437
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=94.86 E-value=0.45 Score=46.94 Aligned_cols=23 Identities=43% Similarity=0.728 Sum_probs=19.8
Q ss_pred CceEEEEEcCCCCCcchhhhhcc
Q psy4598 222 KKQVLIMIGSQGSGKSSFVSTYL 244 (369)
Q Consensus 222 ~~~i~v~~g~~~~gks~~~~~~~ 244 (369)
++.+++++|++|+||||.+.++.
T Consensus 99 ~p~vIlivG~~G~GKTTt~~kLA 121 (443)
T 3dm5_A 99 KPTILLMVGIQGSGKTTTVAKLA 121 (443)
T ss_dssp SSEEEEEECCTTSSHHHHHHHHH
T ss_pred CCeEEEEECcCCCCHHHHHHHHH
Confidence 57889999999999999988653
No 438
>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=94.82 E-value=0.058 Score=55.95 Aligned_cols=84 Identities=18% Similarity=0.197 Sum_probs=58.6
Q ss_pred ccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHcCCCeEEEEecCCCCCCCCchhHHHHHHHHhc
Q psy4598 55 LFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSLNVPVQMFVATQYDRYRKPVPGMWEYLSQEKN 134 (369)
Q Consensus 55 ~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l~i~~~~~~~~~~~~~rKP~~gm~~~~~~~~~ 134 (369)
+.|+++++|++|+++|++++++|+.. ......+.+++|+. .+++. -.|. -=..+++++.
T Consensus 458 l~~~~~~~i~~L~~~Gi~v~~~TGd~------------~~~a~~ia~~lgi~--~~~~~-----~~P~--~K~~~v~~l~ 516 (645)
T 3j08_A 458 LKESAKPAVQELKRMGIKVGMITGDN------------WRSAEAISRELNLD--LVIAE-----VLPH--QKSEEVKKLQ 516 (645)
T ss_dssp CTTTHHHHHHHHHHTTCEEEEECSSC------------HHHHHHHHHHHTCS--EEECS-----CCTT--CHHHHHHHHT
T ss_pred chhHHHHHHHHHHHCCCEEEEEeCCC------------HHHHHHHHHHcCCC--EEEEe-----CCHH--hHHHHHHHHh
Confidence 57999999999999999999999832 23456677888874 12211 1121 2223333331
Q ss_pred CCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCc
Q psy4598 135 GDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAF 180 (369)
Q Consensus 135 ~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f 180 (369)
-. +++.||||.. +|+.+.+.+|+-.
T Consensus 517 ----~~-~~v~~vGDg~----------------ND~~al~~A~vgi 541 (645)
T 3j08_A 517 ----AK-EVVAFVGDGI----------------NDAPALAQADLGI 541 (645)
T ss_dssp ----TT-CCEEEEECSS----------------SCHHHHHHSSEEE
T ss_pred ----hC-CeEEEEeCCH----------------hHHHHHHhCCEEE
Confidence 12 7899999999 8999999999765
No 439
>1mv5_A LMRA, multidrug resistance ABC transporter ATP-binding and permease protein; asymmetric dimer, tetramer, P-glycoprotein; HET: ATP ADP; 3.10A {Lactococcus lactis} SCOP: c.37.1.12
Probab=94.81 E-value=0.016 Score=52.58 Aligned_cols=23 Identities=30% Similarity=0.492 Sum_probs=20.9
Q ss_pred EEEEEEcCCCCcHHHHHHHHhcc
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKP 295 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~ 295 (369)
.++.++|++||||||+.+.++-.
T Consensus 29 e~~~i~G~nGsGKSTLl~~l~Gl 51 (243)
T 1mv5_A 29 SIIAFAGPSGGGKSTIFSLLERF 51 (243)
T ss_dssp EEEEEECCTTSSHHHHHHHHTTS
T ss_pred CEEEEECCCCCCHHHHHHHHhcC
Confidence 68899999999999999999764
No 440
>2onk_A Molybdate/tungstate ABC transporter, ATP-binding protein; membrane protein; 3.10A {Archaeoglobus fulgidus} SCOP: c.37.1.12
Probab=94.81 E-value=0.015 Score=52.65 Aligned_cols=23 Identities=26% Similarity=0.499 Sum_probs=20.8
Q ss_pred EEEEEEcCCCCcHHHHHHHHhcc
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKP 295 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~ 295 (369)
.++.+.|++||||||+.+.++-.
T Consensus 25 e~~~liG~nGsGKSTLl~~l~Gl 47 (240)
T 2onk_A 25 DYCVLLGPTGAGKSVFLELIAGI 47 (240)
T ss_dssp SEEEEECCTTSSHHHHHHHHHTS
T ss_pred EEEEEECCCCCCHHHHHHHHhCC
Confidence 57899999999999999999864
No 441
>1g8p_A Magnesium-chelatase 38 kDa subunit; parallel beta sheet, P-loop, rossman fold, AAA+, photosynthesis, metal transport; 2.10A {Rhodobacter capsulatus} SCOP: c.37.1.20 PDB: 2x31_G
Probab=94.79 E-value=0.0077 Score=56.78 Aligned_cols=23 Identities=30% Similarity=0.553 Sum_probs=21.2
Q ss_pred EEEEcCCCCcHHHHHHHHhccCC
Q psy4598 275 LIMIGSQGSGKSSFVSTYLKPLN 297 (369)
Q Consensus 275 Ill~G~pGSGKSTla~~L~~~~~ 297 (369)
|+|.|+||+|||++|+.+++..+
T Consensus 48 vLl~G~~GtGKT~la~~la~~~~ 70 (350)
T 1g8p_A 48 VLVFGDRGTGKSTAVRALAALLP 70 (350)
T ss_dssp EEEECCGGGCTTHHHHHHHHHSC
T ss_pred EEEECCCCccHHHHHHHHHHhCc
Confidence 89999999999999999998764
No 442
>3gfo_A Cobalt import ATP-binding protein CBIO 1; structural genomics, cell membrane, cobalt transport, hydrolase, ION transport; 2.30A {Clostridium perfringens atcc 13124}
Probab=94.77 E-value=0.015 Score=53.92 Aligned_cols=23 Identities=26% Similarity=0.505 Sum_probs=20.7
Q ss_pred EEEEEEcCCCCcHHHHHHHHhcc
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKP 295 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~ 295 (369)
.++.++|++||||||+.+.++-.
T Consensus 35 e~~~iiGpnGsGKSTLl~~l~Gl 57 (275)
T 3gfo_A 35 EVTAILGGNGVGKSTLFQNFNGI 57 (275)
T ss_dssp SEEEEECCTTSSHHHHHHHHTTS
T ss_pred CEEEEECCCCCCHHHHHHHHHcC
Confidence 57899999999999999999754
No 443
>3kta_A Chromosome segregation protein SMC; structural maintenance of chromosomes, ABC ATPase, CFTR adenylate kinase, AP5A, transferase; HET: AP5; 1.63A {Pyrococcus furiosus} PDB: 1xex_A* 1xew_X*
Probab=94.77 E-value=0.016 Score=49.38 Aligned_cols=22 Identities=32% Similarity=0.499 Sum_probs=19.6
Q ss_pred EEEEEEcCCCCcHHHHHHHHhc
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLK 294 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~ 294 (369)
.+.+++|++||||||+.+++.-
T Consensus 27 g~~~i~G~NGsGKStll~ai~~ 48 (182)
T 3kta_A 27 GFTAIVGANGSGKSNIGDAILF 48 (182)
T ss_dssp SEEEEEECTTSSHHHHHHHHHH
T ss_pred CcEEEECCCCCCHHHHHHHHHH
Confidence 3789999999999999999854
No 444
>2ce2_X GTPase HRAS; signaling protein, guanine nucleotide binding protein, fluor membrane, lipoprotein, palmitate, prenylation; HET: GDP XY2; 1.0A {Homo sapiens} PDB: 2cl0_X* 2cl6_X* 2cl7_X* 2clc_X* 2evw_X* 2cld_X* 1aa9_A* 1ioz_A* 1q21_A* 6q21_A* 3k9l_A* 3k9n_A* 1ctq_A* 1bkd_R 1crp_A* 1crq_A* 1crr_A* 121p_A* 1gnp_A* 1gnq_A* ...
Probab=94.75 E-value=0.019 Score=46.93 Aligned_cols=22 Identities=27% Similarity=0.593 Sum_probs=19.4
Q ss_pred EEEEEcCCCCcHHHHHHHHhcc
Q psy4598 274 VLIMIGSQGSGKSSFVSTYLKP 295 (369)
Q Consensus 274 lIll~G~pGSGKSTla~~L~~~ 295 (369)
-|+++|.+|+||||+.+.+...
T Consensus 5 ~i~v~G~~~~GKssl~~~l~~~ 26 (166)
T 2ce2_X 5 KLVVVGAGGVGKSALTIQLIQN 26 (166)
T ss_dssp EEEEEESTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHhC
Confidence 4889999999999999999753
No 445
>3b85_A Phosphate starvation-inducible protein; PHOH2, ATPase, PFAM: PF02562, ST genomics, PSI-2, protein structure initiative; 2.35A {Corynebacterium glutamicum atcc 13032}
Probab=94.69 E-value=0.013 Score=51.94 Aligned_cols=22 Identities=23% Similarity=0.425 Sum_probs=19.8
Q ss_pred EEEEEEcCCCCcHHHHHHHHhc
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLK 294 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~ 294 (369)
.++.+.|++||||||+.+.++-
T Consensus 23 e~~~liG~nGsGKSTLl~~l~G 44 (208)
T 3b85_A 23 TIVFGLGPAGSGKTYLAMAKAV 44 (208)
T ss_dssp SEEEEECCTTSSTTHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHhc
Confidence 5788999999999999999874
No 446
>1b0u_A Histidine permease; ABC transporter, transport protein; HET: ATP; 1.50A {Salmonella typhimurium} SCOP: c.37.1.12
Probab=94.69 E-value=0.015 Score=53.34 Aligned_cols=23 Identities=43% Similarity=0.602 Sum_probs=20.8
Q ss_pred EEEEEEcCCCCcHHHHHHHHhcc
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKP 295 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~ 295 (369)
.++.|+|++||||||+.+.++-.
T Consensus 33 e~~~liG~nGsGKSTLlk~l~Gl 55 (262)
T 1b0u_A 33 DVISIIGSSGSGKSTFLRCINFL 55 (262)
T ss_dssp CEEEEECCTTSSHHHHHHHHTTS
T ss_pred CEEEEECCCCCCHHHHHHHHhcC
Confidence 57899999999999999999864
No 447
>3pxg_A Negative regulator of genetic competence CLPC/MEC; CLPB, proteolysis, CLPX, HSP100/CLP, AAA+ proteins, PR binding; 3.65A {Bacillus subtilis}
Probab=94.69 E-value=0.013 Score=58.37 Aligned_cols=25 Identities=20% Similarity=0.461 Sum_probs=21.6
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhccC
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKPL 296 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~~ 296 (369)
+.-++|.|+||+|||++++.+++..
T Consensus 201 ~~~~LL~G~pG~GKT~la~~la~~l 225 (468)
T 3pxg_A 201 KNNPVLIGEPGVGKTAIAEGLAQQI 225 (468)
T ss_dssp SCEEEEESCTTTTTHHHHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHHHH
Confidence 3456899999999999999999874
No 448
>1ko7_A HPR kinase/phosphatase; protein kinase, phosphotransfer, protein phosphatase, dual activity, product, substrate, transferase, hydrolase; 1.95A {Staphylococcus xylosus} SCOP: c.98.2.1 c.91.1.2
Probab=94.69 E-value=0.021 Score=53.87 Aligned_cols=33 Identities=24% Similarity=0.343 Sum_probs=26.5
Q ss_pred EEEEEEcCCCCcHHHHHHHHhccCCcEEEeCCcc
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTL 306 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~~~~~~i~~D~~ 306 (369)
.-|+++|++|+||||++.+|.++ ++.+++-|..
T Consensus 145 ~~vl~~G~sG~GKSt~a~~l~~~-g~~lv~dD~~ 177 (314)
T 1ko7_A 145 VGVLITGDSGIGKSETALELIKR-GHRLVADDNV 177 (314)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHT-TCEEEESSEE
T ss_pred EEEEEEeCCCCCHHHHHHHHHhc-CCceecCCeE
Confidence 56899999999999999999886 4555655543
No 449
>1ji0_A ABC transporter; ATP binding protein, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; HET: ATP; 2.00A {Thermotoga maritima} SCOP: c.37.1.12
Probab=94.68 E-value=0.016 Score=52.48 Aligned_cols=23 Identities=26% Similarity=0.541 Sum_probs=20.8
Q ss_pred EEEEEEcCCCCcHHHHHHHHhcc
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKP 295 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~ 295 (369)
.++.+.|++||||||+.+.++-.
T Consensus 33 e~~~l~G~nGsGKSTLl~~l~Gl 55 (240)
T 1ji0_A 33 QIVTLIGANGAGKTTTLSAIAGL 55 (240)
T ss_dssp CEEEEECSTTSSHHHHHHHHTTS
T ss_pred CEEEEECCCCCCHHHHHHHHhCC
Confidence 57899999999999999999764
No 450
>2ff7_A Alpha-hemolysin translocation ATP-binding protein HLYB; ABC-transporter, transport protein; HET: ADP; 1.60A {Escherichia coli} SCOP: c.37.1.12 PDB: 2ffb_A* 2fgk_A* 2ffa_A* 2fgj_A* 2pmk_A* 3b5j_A* 1mt0_A 1xef_A*
Probab=94.67 E-value=0.016 Score=52.76 Aligned_cols=23 Identities=30% Similarity=0.491 Sum_probs=20.9
Q ss_pred EEEEEEcCCCCcHHHHHHHHhcc
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKP 295 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~ 295 (369)
.++.|+|++||||||+.+.++-.
T Consensus 36 e~~~i~G~nGsGKSTLl~~l~Gl 58 (247)
T 2ff7_A 36 EVIGIVGRSGSGKSTLTKLIQRF 58 (247)
T ss_dssp CEEEEECSTTSSHHHHHHHHTTS
T ss_pred CEEEEECCCCCCHHHHHHHHhcC
Confidence 57899999999999999999765
No 451
>3pxi_A Negative regulator of genetic competence CLPC/MEC; CLPB, proteolysis, CLPX, HSP100/CLP, AAA+ proteins, PR binding; 6.93A {Bacillus subtilis}
Probab=94.66 E-value=0.026 Score=59.56 Aligned_cols=26 Identities=19% Similarity=0.427 Sum_probs=22.4
Q ss_pred ccEEEEEEcCCCCcHHHHHHHHhccC
Q psy4598 271 LDSVLIMIGSQGSGKSSFVSTYLKPL 296 (369)
Q Consensus 271 ~~~lIll~G~pGSGKSTla~~L~~~~ 296 (369)
.+.-++|.|+||+|||++|+.+++.+
T Consensus 200 ~~~~vLL~G~pGtGKT~la~~la~~l 225 (758)
T 3pxi_A 200 TKNNPVLIGEPGVGKTAIAEGLAQQI 225 (758)
T ss_dssp SSCEEEEESCTTTTTHHHHHHHHHHH
T ss_pred CCCCeEEECCCCCCHHHHHHHHHHHH
Confidence 34457999999999999999999874
No 452
>1g6h_A High-affinity branched-chain amino acid transport ATP-binding protein; beta-core domain; HET: ADP; 1.60A {Methanocaldococcus jannaschii} SCOP: c.37.1.12 PDB: 1gaj_A 1g9x_A*
Probab=94.65 E-value=0.016 Score=53.00 Aligned_cols=23 Identities=35% Similarity=0.595 Sum_probs=20.6
Q ss_pred EEEEEEcCCCCcHHHHHHHHhcc
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKP 295 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~ 295 (369)
.++.++|++||||||+.+.++-.
T Consensus 34 e~~~liG~nGsGKSTLlk~l~Gl 56 (257)
T 1g6h_A 34 DVTLIIGPNGSGKSTLINVITGF 56 (257)
T ss_dssp CEEEEECSTTSSHHHHHHHHTTS
T ss_pred CEEEEECCCCCCHHHHHHHHhCC
Confidence 57899999999999999999754
No 453
>2d2e_A SUFC protein; ABC-ATPase, SUF protein, 310-helix, riken structural genomics/proteomics initiative, RSGI, structural genomics, binding; 1.70A {Thermus thermophilus} PDB: 2d2f_A*
Probab=94.64 E-value=0.017 Score=52.55 Aligned_cols=23 Identities=26% Similarity=0.440 Sum_probs=21.0
Q ss_pred EEEEEEcCCCCcHHHHHHHHhcc
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKP 295 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~ 295 (369)
.++.|+|++||||||+.+.++-.
T Consensus 30 e~~~l~G~nGsGKSTLlk~l~Gl 52 (250)
T 2d2e_A 30 EVHALMGPNGAGKSTLGKILAGD 52 (250)
T ss_dssp CEEEEECSTTSSHHHHHHHHHTC
T ss_pred CEEEEECCCCCCHHHHHHHHhCC
Confidence 57899999999999999999874
No 454
>2pze_A Cystic fibrosis transmembrane conductance regulat; NBD, ABC transporter, CFTR, hydrolase; HET: ATP; 1.70A {Homo sapiens} PDB: 2pzg_A* 2pzf_A* 1ckx_A 1cky_A 1ckw_A 1ckz_A
Probab=94.63 E-value=0.016 Score=51.96 Aligned_cols=24 Identities=33% Similarity=0.588 Sum_probs=21.3
Q ss_pred EEEEEEcCCCCcHHHHHHHHhccC
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKPL 296 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~~ 296 (369)
.++.++|++||||||+.+.++-..
T Consensus 35 e~~~i~G~nGsGKSTLl~~l~Gl~ 58 (229)
T 2pze_A 35 QLLAVAGSTGAGKTSLLMMIMGEL 58 (229)
T ss_dssp CEEEEECCTTSSHHHHHHHHTTSS
T ss_pred CEEEEECCCCCCHHHHHHHHhCCC
Confidence 578999999999999999998653
No 455
>1sgw_A Putative ABC transporter; structural genomics, P protein structure initiative, southeast collaboratory for S genomics, secsg; 1.70A {Pyrococcus furiosus} SCOP: c.37.1.12
Probab=94.62 E-value=0.014 Score=52.07 Aligned_cols=23 Identities=26% Similarity=0.416 Sum_probs=20.5
Q ss_pred EEEEEEcCCCCcHHHHHHHHhcc
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKP 295 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~ 295 (369)
.++.++|++||||||+.+.++-.
T Consensus 36 e~~~iiG~NGsGKSTLlk~l~Gl 58 (214)
T 1sgw_A 36 NVVNFHGPNGIGKTTLLKTISTY 58 (214)
T ss_dssp CCEEEECCTTSSHHHHHHHHTTS
T ss_pred CEEEEECCCCCCHHHHHHHHhcC
Confidence 46789999999999999999764
No 456
>1yrb_A ATP(GTP)binding protein; GTPase, P-loop, rossman fold, GDP, HYDR; HET: GDP; 1.75A {Pyrococcus abyssi} SCOP: c.37.1.10 PDB: 1yr6_A* 1yr8_A* 1yr9_A* 1yra_A* 1yr7_A* 2oxr_A*
Probab=94.62 E-value=0.036 Score=49.95 Aligned_cols=34 Identities=26% Similarity=0.535 Sum_probs=27.5
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhcc----CCcEEEeCCc
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKP----LNYTTVNRDT 305 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~----~~~~~i~~D~ 305 (369)
+.+++++|.+|+||||++..|+.. ....+++.|.
T Consensus 14 ~~i~~~~GkgGvGKTTl~~~La~~l~~g~~v~vvd~D~ 51 (262)
T 1yrb_A 14 SMIVVFVGTAGSGKTTLTGEFGRYLEDNYKVAYVNLDT 51 (262)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHHHHTTTSCEEEEECCS
T ss_pred eEEEEEeCCCCCCHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 478999999999999999999843 3566777763
No 457
>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A
Probab=94.60 E-value=0.021 Score=52.98 Aligned_cols=41 Identities=20% Similarity=0.293 Sum_probs=35.1
Q ss_pred ccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHcCCCe
Q psy4598 55 LFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSLNVPV 107 (369)
Q Consensus 55 ~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l~i~~ 107 (369)
+.||+.+.++.|+++|++++|+|. .+...++.+++++|+.+
T Consensus 142 l~~g~~e~i~~l~~~gi~v~ivSg------------g~~~~i~~i~~~~g~~~ 182 (297)
T 4fe3_A 142 LKEGYENFFGKLQQHGIPVFIFSA------------GIGDVLEEVIRQAGVYH 182 (297)
T ss_dssp BCBTHHHHHHHHHHTTCCEEEEEE------------EEHHHHHHHHHHTTCCC
T ss_pred CCCcHHHHHHHHHHcCCeEEEEeC------------CcHHHHHHHHHHcCCCc
Confidence 679999999999999999999997 24556788899999853
No 458
>2orw_A Thymidine kinase; TMTK, TP4A, transferase; HET: 4TA; 1.50A {Thermotoga maritima} PDB: 2qpo_A 2qq0_A* 2qqe_A*
Probab=94.59 E-value=0.016 Score=50.25 Aligned_cols=23 Identities=17% Similarity=0.369 Sum_probs=19.3
Q ss_pred EEEEEEcCCCCcHHHHHHHHhcc
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKP 295 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~ 295 (369)
.+++++|+|||||||++..++..
T Consensus 4 ~i~vi~G~~gsGKTT~ll~~~~~ 26 (184)
T 2orw_A 4 KLTVITGPMYSGKTTELLSFVEI 26 (184)
T ss_dssp CEEEEEESTTSSHHHHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHHHHH
Confidence 57899999999999999666543
No 459
>2olj_A Amino acid ABC transporter; ABC domain, ATPase, hydrolase; HET: ADP; 2.05A {Geobacillus stearothermophilus} PDB: 2olk_A* 2ouk_A 2q0h_A* 3c4j_A* 3c41_J*
Probab=94.59 E-value=0.017 Score=53.18 Aligned_cols=23 Identities=39% Similarity=0.642 Sum_probs=20.9
Q ss_pred EEEEEEcCCCCcHHHHHHHHhcc
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKP 295 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~ 295 (369)
.++.|+|++||||||+.+.++-.
T Consensus 51 ei~~liG~NGsGKSTLlk~l~Gl 73 (263)
T 2olj_A 51 EVVVVIGPSGSGKSTFLRCLNLL 73 (263)
T ss_dssp CEEEEECCTTSSHHHHHHHHTTS
T ss_pred CEEEEEcCCCCcHHHHHHHHHcC
Confidence 57899999999999999999864
No 460
>2qgz_A Helicase loader, putative primosome component; structural genomics, PSI-2, protein structure initiative; 2.40A {Streptococcus pyogenes serotype M3}
Probab=94.58 E-value=0.016 Score=54.44 Aligned_cols=24 Identities=25% Similarity=0.394 Sum_probs=20.9
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhcc
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKP 295 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~ 295 (369)
..-++|.|+||+|||+++.+++..
T Consensus 152 ~~~lll~G~~GtGKT~La~aia~~ 175 (308)
T 2qgz_A 152 QKGLYLYGDMGIGKSYLLAAMAHE 175 (308)
T ss_dssp CCEEEEECSTTSSHHHHHHHHHHH
T ss_pred CceEEEECCCCCCHHHHHHHHHHH
Confidence 457899999999999999998763
No 461
>2p67_A LAO/AO transport system kinase; ARGK, structural GEN PSI-2, protein structure initiative, NEW YORK SGX research for structural genomics; 1.80A {Escherichia coli} SCOP: c.37.1.10
Probab=94.56 E-value=0.19 Score=47.63 Aligned_cols=36 Identities=25% Similarity=0.367 Sum_probs=26.5
Q ss_pred cccEEEEEEcCCCCcHHHHHHHHhcc-----CCcEEEeCCc
Q psy4598 270 ALDSVLIMIGSQGSGKSSFVSTYLKP-----LNYTTVNRDT 305 (369)
Q Consensus 270 ~~~~lIll~G~pGSGKSTla~~L~~~-----~~~~~i~~D~ 305 (369)
....+|.++|+||+||||+...|+.. ....+++.|.
T Consensus 54 ~~~~~i~i~G~~g~GKSTl~~~l~~~~~~~~~~v~v~~~d~ 94 (341)
T 2p67_A 54 GNTLRLGVTGTPGAGKSTFLEAFGMLLIREGLKVAVIAVDP 94 (341)
T ss_dssp SCSEEEEEEECTTSCHHHHHHHHHHHHHHTTCCEEEEEECC
T ss_pred CCCEEEEEEcCCCCCHHHHHHHHHHHHHhcCCeEEEEeecC
Confidence 34578899999999999999999743 2344555444
No 462
>2ixe_A Antigen peptide transporter 1; ABC ATPase, hydrolase; HET: ATP; 2.0A {Rattus norvegicus} PDB: 2ixg_A* 2ixf_A* 1jj7_A*
Probab=94.51 E-value=0.018 Score=53.16 Aligned_cols=23 Identities=30% Similarity=0.497 Sum_probs=20.8
Q ss_pred EEEEEEcCCCCcHHHHHHHHhcc
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKP 295 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~ 295 (369)
.++.|+|++|||||||.+.++-.
T Consensus 46 e~~~i~G~nGsGKSTLlk~l~Gl 68 (271)
T 2ixe_A 46 KVTALVGPNGSGKSTVAALLQNL 68 (271)
T ss_dssp CEEEEECSTTSSHHHHHHHHTTS
T ss_pred CEEEEECCCCCCHHHHHHHHhcC
Confidence 57899999999999999999764
No 463
>2zts_A Putative uncharacterized protein PH0186; KAIC like protein, ATP-binding, nucleotide-binding, ATP- binding protein; HET: ADP; 2.07A {Pyrococcus horikoshii}
Probab=94.50 E-value=0.02 Score=50.97 Aligned_cols=33 Identities=18% Similarity=0.445 Sum_probs=25.3
Q ss_pred EEEEEEcCCCCcHHHHHHHHhcc------CCcEEEeCCc
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKP------LNYTTVNRDT 305 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~------~~~~~i~~D~ 305 (369)
.++++.|.||+|||+|+.+++.. ..+.+++.+.
T Consensus 31 ~l~~i~G~pG~GKT~l~l~~~~~~~~~~~~~v~~~s~E~ 69 (251)
T 2zts_A 31 TTVLLTGGTGTGKTTFAAQFIYKGAEEYGEPGVFVTLEE 69 (251)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHHHHHHCCCEEEEESSS
T ss_pred eEEEEEeCCCCCHHHHHHHHHHHHHHhcCCCceeecccC
Confidence 68999999999999999987542 2455666543
No 464
>2ghi_A Transport protein; multidrug resistance protein, MDR, structural genomics, structural genomics consortium, SGC; 2.20A {Plasmodium yoelii yoelii str}
Probab=94.50 E-value=0.018 Score=52.75 Aligned_cols=23 Identities=26% Similarity=0.473 Sum_probs=20.8
Q ss_pred EEEEEEcCCCCcHHHHHHHHhcc
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKP 295 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~ 295 (369)
.++.++|++||||||+.+.++-.
T Consensus 47 e~~~i~G~nGsGKSTLl~~l~Gl 69 (260)
T 2ghi_A 47 TTCALVGHTGSGKSTIAKLLYRF 69 (260)
T ss_dssp CEEEEECSTTSSHHHHHHHHTTS
T ss_pred CEEEEECCCCCCHHHHHHHHhcc
Confidence 57899999999999999999764
No 465
>1knx_A Probable HPR(Ser) kinase/phosphatase; HPR kinase, HPR kinase/phosphatase, HPRK/P, P-loop, walker A BOX, catabolite repression; 2.50A {Mycoplasma pneumoniae} SCOP: c.98.2.1 c.91.1.2
Probab=94.49 E-value=0.021 Score=53.82 Aligned_cols=33 Identities=24% Similarity=0.365 Sum_probs=26.0
Q ss_pred EEEEEEcCCCCcHHHHHHHHhccCCcEEEeCCcc
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTL 306 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~~~~~~i~~D~~ 306 (369)
.-|+++|+||+||||+|.+|.++ |+.+++-|..
T Consensus 148 ~gvli~G~sG~GKStlal~l~~~-G~~lv~DD~v 180 (312)
T 1knx_A 148 VGVLLTGRSGIGKSECALDLINK-NHLFVGDDAI 180 (312)
T ss_dssp EEEEEEESSSSSHHHHHHHHHTT-TCEEEEEEEE
T ss_pred EEEEEEcCCCCCHHHHHHHHHHc-CCEEEeCCEE
Confidence 46899999999999999999874 4556655543
No 466
>1w5s_A Origin recognition complex subunit 2 ORC2; replication, CDC6, DNA replication initiation, DNA BIND protein, AAA+ ATPase; HET: ADP; 2.4A {Aeropyrum pernix} SCOP: a.4.5.11 c.37.1.20 PDB: 1w5t_A*
Probab=94.49 E-value=0.11 Score=49.82 Aligned_cols=26 Identities=31% Similarity=0.469 Sum_probs=22.0
Q ss_pred ccEEEEE--EcCCCCcHHHHHHHHhccC
Q psy4598 271 LDSVLIM--IGSQGSGKSSFVSTYLKPL 296 (369)
Q Consensus 271 ~~~lIll--~G~pGSGKSTla~~L~~~~ 296 (369)
.+..+++ .|+||+||||+++.+++..
T Consensus 49 ~~~~~li~i~G~~G~GKT~L~~~~~~~~ 76 (412)
T 1w5s_A 49 SDVNMIYGSIGRVGIGKTTLAKFTVKRV 76 (412)
T ss_dssp CCEEEEEECTTCCSSSHHHHHHHHHHHH
T ss_pred CCCEEEEeCcCcCCCCHHHHHHHHHHHH
Confidence 3567888 9999999999999998653
No 467
>1vpl_A ABC transporter, ATP-binding protein; TM0544, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.10A {Thermotoga maritima} SCOP: c.37.1.12
Probab=94.48 E-value=0.019 Score=52.65 Aligned_cols=23 Identities=22% Similarity=0.430 Sum_probs=20.8
Q ss_pred EEEEEEcCCCCcHHHHHHHHhcc
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKP 295 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~ 295 (369)
.++.|.|++||||||+.+.++-.
T Consensus 42 ei~~l~G~NGsGKSTLlk~l~Gl 64 (256)
T 1vpl_A 42 EIFGLIGPNGAGKTTTLRIISTL 64 (256)
T ss_dssp CEEEEECCTTSSHHHHHHHHTTS
T ss_pred cEEEEECCCCCCHHHHHHHHhcC
Confidence 57899999999999999999864
No 468
>2zu0_C Probable ATP-dependent transporter SUFC; iron-sulfur cluster, ABC-ATPase, ATP-binding, cytoplasm, nucleotide-binding; HET: MES; 2.20A {Escherichia coli} PDB: 2d3w_A
Probab=94.47 E-value=0.02 Score=52.76 Aligned_cols=23 Identities=35% Similarity=0.541 Sum_probs=20.9
Q ss_pred EEEEEEcCCCCcHHHHHHHHhcc
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKP 295 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~ 295 (369)
.++.|+|++||||||+.+.++-.
T Consensus 47 e~~~l~G~NGsGKSTLlk~l~Gl 69 (267)
T 2zu0_C 47 EVHAIMGPNGSGKSTLSATLAGR 69 (267)
T ss_dssp CEEEEECCTTSSHHHHHHHHHTC
T ss_pred CEEEEECCCCCCHHHHHHHHhCC
Confidence 57899999999999999999874
No 469
>3nbx_X ATPase RAVA; AAA+ ATPase, alpha-beta-alpha structure, rossman fold, hydro; HET: ADP; 2.91A {Escherichia coli}
Probab=94.46 E-value=0.018 Score=58.00 Aligned_cols=23 Identities=17% Similarity=0.297 Sum_probs=21.2
Q ss_pred EEEEEcCCCCcHHHHHHHHhccC
Q psy4598 274 VLIMIGSQGSGKSSFVSTYLKPL 296 (369)
Q Consensus 274 lIll~G~pGSGKSTla~~L~~~~ 296 (369)
-|+|.|+||+|||++|+.++...
T Consensus 43 ~VLL~GpPGtGKT~LAraLa~~l 65 (500)
T 3nbx_X 43 SVFLLGPPGIAKSLIARRLKFAF 65 (500)
T ss_dssp EEEEECCSSSSHHHHHHHGGGGB
T ss_pred eeEeecCchHHHHHHHHHHHHHH
Confidence 47999999999999999999876
No 470
>2qi9_C Vitamin B12 import ATP-binding protein BTUD; inner membrane, membrane, transmembrane, transport, ATP- binding, hydrolase, nucleotide-binding, periplasm; HET: 1PE; 2.60A {Escherichia coli} PDB: 1l7v_C* 4dbl_C
Probab=94.44 E-value=0.019 Score=52.34 Aligned_cols=23 Identities=26% Similarity=0.576 Sum_probs=20.6
Q ss_pred EEEEEEcCCCCcHHHHHHHHhcc
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKP 295 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~ 295 (369)
.++.+.|++||||||+.+.++-.
T Consensus 27 e~~~liG~NGsGKSTLlk~l~Gl 49 (249)
T 2qi9_C 27 EILHLVGPNGAGKSTLLARMAGM 49 (249)
T ss_dssp CEEEEECCTTSSHHHHHHHHTTS
T ss_pred CEEEEECCCCCcHHHHHHHHhCC
Confidence 57899999999999999998754
No 471
>2yz2_A Putative ABC transporter ATP-binding protein TM_0; cobalt transport, TM02 hydrolase, inner membrane, membrane, nucleotide-binding; 2.30A {Thermotoga maritima}
Probab=94.39 E-value=0.02 Score=52.66 Aligned_cols=23 Identities=30% Similarity=0.512 Sum_probs=20.6
Q ss_pred EEEEEEcCCCCcHHHHHHHHhcc
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKP 295 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~ 295 (369)
.++.++|++||||||+.+.++-.
T Consensus 34 e~~~liG~nGsGKSTLl~~i~Gl 56 (266)
T 2yz2_A 34 ECLLVAGNTGSGKSTLLQIVAGL 56 (266)
T ss_dssp CEEEEECSTTSSHHHHHHHHTTS
T ss_pred CEEEEECCCCCcHHHHHHHHhCC
Confidence 57899999999999999999764
No 472
>1nij_A Hypothetical protein YJIA; structural genomics, P-loop protein, GTP binding, structure function project, S2F, unknown function; 2.00A {Escherichia coli} SCOP: c.37.1.10 d.237.1.1
Probab=94.39 E-value=0.026 Score=53.13 Aligned_cols=24 Identities=25% Similarity=0.473 Sum_probs=21.3
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhcc
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKP 295 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~ 295 (369)
.++++++|++||||||+.+.|...
T Consensus 4 i~v~~i~G~~GaGKTTll~~l~~~ 27 (318)
T 1nij_A 4 IAVTLLTGFLGAGKTTLLRHILNE 27 (318)
T ss_dssp EEEEEEEESSSSSCHHHHHHHHHS
T ss_pred ccEEEEEecCCCCHHHHHHHHHhh
Confidence 468999999999999999999843
No 473
>2ihy_A ABC transporter, ATP-binding protein; ATPase, ABC cassette, hydrolase; HET: MSE; 1.90A {Staphylococcus aureus}
Probab=94.35 E-value=0.02 Score=53.06 Aligned_cols=23 Identities=22% Similarity=0.400 Sum_probs=20.7
Q ss_pred EEEEEEcCCCCcHHHHHHHHhcc
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKP 295 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~ 295 (369)
.++.|+|++||||||+.+.++-.
T Consensus 48 e~~~liG~NGsGKSTLlk~l~Gl 70 (279)
T 2ihy_A 48 DKWILYGLNGAGKTTLLNILNAY 70 (279)
T ss_dssp CEEEEECCTTSSHHHHHHHHTTS
T ss_pred CEEEEECCCCCcHHHHHHHHhCC
Confidence 57899999999999999999764
No 474
>1q57_A DNA primase/helicase; dntpase, DNA replication, transferase; HET: DNA; 3.45A {Enterobacteria phage T7} SCOP: c.37.1.11 e.13.1.2
Probab=94.34 E-value=0.14 Score=51.25 Aligned_cols=32 Identities=16% Similarity=0.145 Sum_probs=25.7
Q ss_pred EEEEEEcCCCCcHHHHHHHHhcc------CCcEEEeCC
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKP------LNYTTVNRD 304 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~------~~~~~i~~D 304 (369)
.++++.|+||+|||||+..++.. .++.+++.+
T Consensus 243 ~l~li~G~pG~GKT~lal~~a~~~a~~~g~~vl~~s~E 280 (503)
T 1q57_A 243 EVIMVTSGSGMVMSTFVRQQALQWGTAMGKKVGLAMLE 280 (503)
T ss_dssp CEEEEEESSCHHHHHHHHHHHHHHTTTSCCCEEEEESS
T ss_pred eEEEEeecCCCCchHHHHHHHHHHHHhcCCcEEEEecc
Confidence 68999999999999999998753 245666655
No 475
>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}
Probab=94.32 E-value=0.032 Score=54.19 Aligned_cols=88 Identities=10% Similarity=0.123 Sum_probs=56.9
Q ss_pred ccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHcCC----CeEEEEecC-----CC---------
Q psy4598 55 LFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSLNV----PVQMFVATQ-----YD--------- 116 (369)
Q Consensus 55 ~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l~i----~~~~~~~~~-----~~--------- 116 (369)
++|++.+.++.|+++|++++|||- .+...++.+.+.+|+ |-+-+++.. +.
T Consensus 222 ~~p~~~eLi~~L~~~G~~v~IVSg------------g~~~~v~~ia~~lg~~y~ip~~~Vig~~l~~~~dG~~tg~~~~~ 289 (385)
T 4gxt_A 222 TLDEMVDLYRSLEENGIDCYIVSA------------SFIDIVRAFATDTNNNYKMKEEKVLGLRLMKDDEGKILPKFDKD 289 (385)
T ss_dssp ECHHHHHHHHHHHHTTCEEEEEEE------------EEHHHHHHHHHCTTSSCCCCGGGEEEECEEECTTCCEEEEECTT
T ss_pred eCHHHHHHHHHHHHCCCeEEEEcC------------CcHHHHHHHHHHhCcccCCCcceEEEeEEEEecCCceeeeecCc
Confidence 599999999999999999999997 234556777787764 322222221 10
Q ss_pred ---CCCCCchhHHHHHHHHhcCCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHh
Q psy4598 117 ---RYRKPVPGMWEYLSQEKNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFN 175 (369)
Q Consensus 117 ---~~rKP~~gm~~~~~~~~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n 175 (369)
.++.-++..++.+++. .++...++++||+. .|+.+-..
T Consensus 290 ~p~~~~~gK~~~i~~~~~~-----~~~~~~i~a~GDs~----------------~D~~ML~~ 330 (385)
T 4gxt_A 290 FPISIREGKVQTINKLIKN-----DRNYGPIMVGGDSD----------------GDFAMLKE 330 (385)
T ss_dssp SCCCSTHHHHHHHHHHTCC-----TTEECCSEEEECSG----------------GGHHHHHH
T ss_pred cceeCCCchHHHHHHHHHh-----cCCCCcEEEEECCH----------------hHHHHHhc
Confidence 0111133344444432 34567899999999 68887765
No 476
>1oix_A RAS-related protein RAB-11A; small G protein, intracellular trafficking, GTP-binding, lipoprotein, prenylation, protein transport; HET: GDP; 1.7A {Homo sapiens} SCOP: c.37.1.8 PDB: 1oiw_A* 1oiv_A* 3rwo_B* 3rwm_B*
Probab=94.30 E-value=0.021 Score=49.07 Aligned_cols=23 Identities=30% Similarity=0.644 Sum_probs=20.4
Q ss_pred EEEEEEcCCCCcHHHHHHHHhcc
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKP 295 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~ 295 (369)
..|+|+|++|||||||.+.+...
T Consensus 30 ~kv~lvG~~g~GKSTLl~~l~~~ 52 (191)
T 1oix_A 30 FKVVLIGDSGVGKSNLLSRFTRN 52 (191)
T ss_dssp EEEEEEECTTSSHHHHHHHHHHS
T ss_pred eEEEEECcCCCCHHHHHHHHhcC
Confidence 46899999999999999999754
No 477
>3qf4_A ABC transporter, ATP-binding protein; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=94.27 E-value=0.23 Score=50.70 Aligned_cols=24 Identities=29% Similarity=0.582 Sum_probs=21.5
Q ss_pred EEEEEEcCCCCcHHHHHHHHhccC
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKPL 296 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~~ 296 (369)
..+.++|++||||||+.+.+...+
T Consensus 370 e~~~ivG~sGsGKSTll~~l~g~~ 393 (587)
T 3qf4_A 370 SLVAVLGETGSGKSTLMNLIPRLI 393 (587)
T ss_dssp CEEEEECSSSSSHHHHHHTTTTSS
T ss_pred CEEEEECCCCCCHHHHHHHHhCCc
Confidence 578999999999999999998754
No 478
>1z2a_A RAS-related protein RAB-23; RAB GTPase, vesicular trafficking, protein transport; HET: GDP; 1.90A {Mus musculus} SCOP: c.37.1.8 PDB: 1z22_A*
Probab=94.26 E-value=0.024 Score=46.68 Aligned_cols=23 Identities=30% Similarity=0.579 Sum_probs=20.0
Q ss_pred EEEEEEcCCCCcHHHHHHHHhcc
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKP 295 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~ 295 (369)
.-|+++|.+|+||||+.+.+...
T Consensus 6 ~~i~v~G~~~~GKssl~~~l~~~ 28 (168)
T 1z2a_A 6 IKMVVVGNGAVGKSSMIQRYCKG 28 (168)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHC
T ss_pred EEEEEECcCCCCHHHHHHHHHcC
Confidence 45789999999999999999753
No 479
>2nq2_C Hypothetical ABC transporter ATP-binding protein HI1470; putative iron chelatin ABC transporter, nucleotide binding domain; 2.40A {Haemophilus influenzae}
Probab=94.26 E-value=0.022 Score=52.06 Aligned_cols=23 Identities=30% Similarity=0.612 Sum_probs=20.7
Q ss_pred EEEEEEcCCCCcHHHHHHHHhcc
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKP 295 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~ 295 (369)
.++.+.|++||||||+.+.++-.
T Consensus 32 e~~~l~G~nGsGKSTLl~~l~Gl 54 (253)
T 2nq2_C 32 DILAVLGQNGCGKSTLLDLLLGI 54 (253)
T ss_dssp CEEEEECCSSSSHHHHHHHHTTS
T ss_pred CEEEEECCCCCCHHHHHHHHhCC
Confidence 57899999999999999999764
No 480
>2wjg_A FEOB, ferrous iron transport protein B homolog; membrane G-proteins, cell membrane, ION transport, transmembrane; HET: GDP; 2.20A {Methanocaldococcus jannaschii}
Probab=94.24 E-value=0.03 Score=47.33 Aligned_cols=22 Identities=23% Similarity=0.386 Sum_probs=20.3
Q ss_pred EEEEEEcCCCCcHHHHHHHHhc
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLK 294 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~ 294 (369)
.-|+++|++|+||||+.+.|..
T Consensus 8 ~~i~lvG~~gvGKStL~~~l~~ 29 (188)
T 2wjg_A 8 YEIALIGNPNVGKSTIFNALTG 29 (188)
T ss_dssp EEEEEECSTTSSHHHHHHHHHT
T ss_pred CEEEEECCCCCCHHHHHHHHhC
Confidence 5789999999999999999986
No 481
>1r6b_X CLPA protein; AAA+, N-terminal domain, CLPS, crystal, binding mechanism, hydrolase; HET: ADP; 2.25A {Escherichia coli} SCOP: a.174.1.1 c.37.1.20 c.37.1.20 PDB: 1ksf_X*
Probab=94.23 E-value=0.065 Score=56.39 Aligned_cols=72 Identities=15% Similarity=0.305 Sum_probs=0.0
Q ss_pred hhhhhhccccccEEEEEEcCCCCcHHHHHHHHhccC----------CcEEEeCCcc---------hhHHHHHHHHHHHHh
Q psy4598 261 QKCVSVMKAALDSVLIMIGSQGSGKSSFVSTYLKPL----------NYTTVNRDTL---------GSWQKCVSVMKAALD 321 (369)
Q Consensus 261 ~~~~~~~~~~~~~lIll~G~pGSGKSTla~~L~~~~----------~~~~i~~D~~---------~~~~~~~~~~~~~l~ 321 (369)
...........+.-++|+|+||+|||++++.+++.+ +..++..|.- ..+....+.+...+.
T Consensus 196 ~~l~~~l~~~~~~~vlL~G~~GtGKT~la~~la~~l~~~~v~~~~~~~~~~~~~~~~l~~~~~~~g~~e~~l~~~~~~~~ 275 (758)
T 1r6b_X 196 ERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLE 275 (758)
T ss_dssp HHHHHHHTSSSSCEEEEECCTTSSHHHHHHHHHHHHHHTCSCGGGTTCEEEECCCC---CCCCCSSCHHHHHHHHHHHHS
T ss_pred HHHHHHHhccCCCCeEEEcCCCCCHHHHHHHHHHHHHhCCCChhhcCCEEEEEcHHHHhccccccchHHHHHHHHHHHHH
Q ss_pred C--CCcEEEeCCC
Q psy4598 322 S--GLSVVVDNTN 332 (369)
Q Consensus 322 ~--g~~vIiD~tn 332 (369)
. +..++||...
T Consensus 276 ~~~~~iL~IDEi~ 288 (758)
T 1r6b_X 276 QDTNSILFIDEIH 288 (758)
T ss_dssp SSSCEEEEETTTT
T ss_pred hcCCeEEEEechH
No 482
>1ojl_A Transcriptional regulatory protein ZRAR; response regulator, two component system, AAA domain, NTRC family, DNA-binding; HET: ATP; 3.0A {Salmonella typhimurium}
Probab=94.23 E-value=0.033 Score=52.13 Aligned_cols=34 Identities=21% Similarity=0.312 Sum_probs=26.6
Q ss_pred EEEEEEcCCCCcHHHHHHHHhccC-----CcEEEeCCcc
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKPL-----NYTTVNRDTL 306 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~~-----~~~~i~~D~~ 306 (369)
.-|+|.|+||+|||++|+.+.... .++.++...+
T Consensus 26 ~~vLi~Ge~GtGKt~lAr~i~~~~~~~~~~~v~v~~~~~ 64 (304)
T 1ojl_A 26 ATVLIHGDSGTGKELVARALHACSARSDRPLVTLNCAAL 64 (304)
T ss_dssp SCEEEESCTTSCHHHHHHHHHHHSSCSSSCCCEEECSSC
T ss_pred CcEEEECCCCchHHHHHHHHHHhCcccCCCeEEEeCCCC
Confidence 457899999999999999998742 4566775554
No 483
>2f9l_A RAB11B, member RAS oncogene family; RAB11B GTPase, vesicle transport, hydrolase; HET: GDP; 1.55A {Homo sapiens} SCOP: c.37.1.8 PDB: 2f9m_A* 1yzk_A* 2hv8_A* 2gzd_A* 2gzh_A* 2d7c_A* 3bfk_A*
Probab=94.20 E-value=0.025 Score=48.82 Aligned_cols=23 Identities=30% Similarity=0.644 Sum_probs=20.2
Q ss_pred EEEEEEcCCCCcHHHHHHHHhcc
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKP 295 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~ 295 (369)
.-|+++|++||||||+.+.+...
T Consensus 6 ~kv~lvG~~g~GKSTLl~~l~~~ 28 (199)
T 2f9l_A 6 FKVVLIGDSGVGKSNLLSRFTRN 28 (199)
T ss_dssp EEEEEESSTTSSHHHHHHHHHHS
T ss_pred EEEEEECcCCCCHHHHHHHHhcC
Confidence 45789999999999999999764
No 484
>2ewv_A Twitching motility protein PILT; pilus retraction motor, ATPase, hexameric PILT, protein TRAN; HET: ADP; 2.80A {Aquifex aeolicus} PDB: 2eww_A* 2gsz_A*
Probab=94.20 E-value=0.028 Score=54.25 Aligned_cols=25 Identities=24% Similarity=0.488 Sum_probs=21.9
Q ss_pred ccEEEEEEcCCCCcHHHHHHHHhcc
Q psy4598 271 LDSVLIMIGSQGSGKSSFVSTYLKP 295 (369)
Q Consensus 271 ~~~lIll~G~pGSGKSTla~~L~~~ 295 (369)
...+|+++|++||||||+.+.+...
T Consensus 135 ~g~~i~ivG~~GsGKTTll~~l~~~ 159 (372)
T 2ewv_A 135 KMGLILVTGPTGSGKSTTIASMIDY 159 (372)
T ss_dssp SSEEEEEECSSSSSHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHHHHHhh
Confidence 3478999999999999999999764
No 485
>1gvn_B Zeta; postsegregational killing system, plasmid; 1.95A {Streptococcus pyogenes} SCOP: c.37.1.21 PDB: 3q8x_B*
Probab=94.18 E-value=0.014 Score=54.25 Aligned_cols=39 Identities=26% Similarity=0.416 Sum_probs=31.0
Q ss_pred CCCceEEEEEcCCCCCcchhhhhccCC--Cccccccccccc
Q psy4598 220 HDKKQVLIMIGSQGSGKSSFVSTYLKP--LNYTTVNRDTLG 258 (369)
Q Consensus 220 ~~~~~i~v~~g~~~~gks~~~~~~~~~--~~~~~i~r~~~~ 258 (369)
.....++|++|+|||||||+++.+... .++..|+.|+++
T Consensus 30 ~~~~~livl~G~sGsGKSTla~~L~~~~~~~~~~Is~D~~R 70 (287)
T 1gvn_B 30 VESPTAFLLGGQPGSGKTSLRSAIFEETQGNVIVIDNDTFK 70 (287)
T ss_dssp CSSCEEEEEECCTTSCTHHHHHHHHHHTTTCCEEECTHHHH
T ss_pred CCCCeEEEEECCCCCCHHHHHHHHHHHhCCCeEEEechHhH
Confidence 344678899999999999999987543 377888888775
No 486
>2gza_A Type IV secretion system protein VIRB11; ATPase, hydrolase; 2.60A {Brucella suis}
Probab=94.17 E-value=0.021 Score=54.93 Aligned_cols=24 Identities=25% Similarity=0.684 Sum_probs=21.7
Q ss_pred EEEEEEcCCCCcHHHHHHHHhccC
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKPL 296 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~~ 296 (369)
.+++++|++||||||+.+.|...+
T Consensus 176 ~~i~ivG~sGsGKSTll~~l~~~~ 199 (361)
T 2gza_A 176 RVIVVAGETGSGKTTLMKALMQEI 199 (361)
T ss_dssp CCEEEEESSSSCHHHHHHHHHTTS
T ss_pred CEEEEECCCCCCHHHHHHHHHhcC
Confidence 578999999999999999998764
No 487
>3sop_A Neuronal-specific septin-3; hydrolase; HET: GDP; 2.88A {Homo sapiens}
Probab=94.15 E-value=0.022 Score=52.48 Aligned_cols=22 Identities=36% Similarity=0.715 Sum_probs=19.4
Q ss_pred EEEEEcCCCCcHHHHHHHHhcc
Q psy4598 274 VLIMIGSQGSGKSSFVSTYLKP 295 (369)
Q Consensus 274 lIll~G~pGSGKSTla~~L~~~ 295 (369)
.+.++|++||||||+.+.|...
T Consensus 4 ~v~lvG~nGaGKSTLln~L~g~ 25 (270)
T 3sop_A 4 NIMVVGQSGLGKSTLVNTLFKS 25 (270)
T ss_dssp EEEEEESSSSSHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 4789999999999999999753
No 488
>1lw7_A Transcriptional regulator NADR; NMN, NMN adenylyl transferase, ribosylnicotinamide KINA transferase; HET: NAD; 2.90A {Haemophilus influenzae} SCOP: c.26.1.3 c.37.1.1
Probab=94.13 E-value=0.027 Score=54.06 Aligned_cols=25 Identities=28% Similarity=0.501 Sum_probs=21.8
Q ss_pred EEEEEEcCCCCcHHHHHHHHhccCC
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKPLN 297 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~~~ 297 (369)
..+.++|++||||||+++.|+..++
T Consensus 171 ~k~~IvG~nGsGKSTLlk~L~gl~~ 195 (365)
T 1lw7_A 171 KTVAILGGESSGKSVLVNKLAAVFN 195 (365)
T ss_dssp EEEEEECCTTSHHHHHHHHHHHHTT
T ss_pred CeEEEECCCCCCHHHHHHHHHHHhC
Confidence 5678999999999999999987654
No 489
>2wji_A Ferrous iron transport protein B homolog; membrane G-proteins, cell membrane, ION transport, transmembrane; HET: GNP; 1.90A {Methanocaldococcus jannaschii} PDB: 2wjj_A* 2wjh_A*
Probab=94.10 E-value=0.032 Score=46.53 Aligned_cols=22 Identities=23% Similarity=0.386 Sum_probs=20.1
Q ss_pred EEEEEEcCCCCcHHHHHHHHhc
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLK 294 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~ 294 (369)
..|+++|+||+||||+.+++..
T Consensus 4 ~~v~lvG~~gvGKStL~~~l~~ 25 (165)
T 2wji_A 4 YEIALIGNPNVGKSTIFNALTG 25 (165)
T ss_dssp EEEEEECSTTSSHHHHHHHHHC
T ss_pred cEEEEECCCCCCHHHHHHHHhC
Confidence 4689999999999999999986
No 490
>2zej_A Dardarin, leucine-rich repeat kinase 2; parkinson'S disease, LRRK2, ROC, GTPase, ROCO, ATP-B disease mutation, GTP-binding, GTPase activation; HET: GDP; 2.00A {Homo sapiens} PDB: 3d6t_B*
Probab=94.06 E-value=0.026 Score=47.96 Aligned_cols=21 Identities=33% Similarity=0.785 Sum_probs=19.2
Q ss_pred EEEEEcCCCCcHHHHHHHHhc
Q psy4598 274 VLIMIGSQGSGKSSFVSTYLK 294 (369)
Q Consensus 274 lIll~G~pGSGKSTla~~L~~ 294 (369)
-|+++|.||+|||||.+.+..
T Consensus 4 kv~ivG~~gvGKStLl~~l~~ 24 (184)
T 2zej_A 4 KLMIVGNTGSGKTTLLQQLMK 24 (184)
T ss_dssp EEEEESCTTSSHHHHHHHHTC
T ss_pred EEEEECCCCCCHHHHHHHHhc
Confidence 378999999999999999986
No 491
>1kao_A RAP2A; GTP-binding protein, small G protein, GDP, RAS; HET: GDP; 1.70A {Homo sapiens} SCOP: c.37.1.8 PDB: 2rap_A* 3rap_R*
Probab=94.03 E-value=0.029 Score=45.99 Aligned_cols=22 Identities=27% Similarity=0.610 Sum_probs=19.4
Q ss_pred EEEEEEcCCCCcHHHHHHHHhc
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLK 294 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~ 294 (369)
.-|+++|.+|+||||+..++..
T Consensus 4 ~~i~v~G~~~~GKSsli~~l~~ 25 (167)
T 1kao_A 4 YKVVVLGSGGVGKSALTVQFVT 25 (167)
T ss_dssp EEEEEECCTTSSHHHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHHHc
Confidence 3589999999999999999874
No 492
>2pjz_A Hypothetical protein ST1066; ATP binding protein, structural genomics, NPPSFA; 1.90A {Sulfolobus tokodaii}
Probab=94.00 E-value=0.028 Score=51.69 Aligned_cols=24 Identities=25% Similarity=0.515 Sum_probs=20.8
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhcc
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKP 295 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~ 295 (369)
-.++.+.|++||||||+.+.++-.
T Consensus 30 Ge~~~i~G~NGsGKSTLlk~l~Gl 53 (263)
T 2pjz_A 30 GEKVIILGPNGSGKTTLLRAISGL 53 (263)
T ss_dssp SSEEEEECCTTSSHHHHHHHHTTS
T ss_pred CEEEEEECCCCCCHHHHHHHHhCC
Confidence 357899999999999999999753
No 493
>1wf3_A GTP-binding protein; GTPase, riken structural genomics/prote initiative, RSGI, structural genomics, hydrolase; HET: GNP; 1.88A {Thermus thermophilus} SCOP: c.37.1.8 d.52.3.1
Probab=93.98 E-value=0.26 Score=45.87 Aligned_cols=89 Identities=17% Similarity=0.123 Sum_probs=50.2
Q ss_pred EEEEEEcCCCCcHHHHHHHHhccCC-----cE---------EEeCCcc----------h----hHH-HHHHHHHHHHhCC
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKPLN-----YT---------TVNRDTL----------G----SWQ-KCVSVMKAALDSG 323 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~~~-----~~---------~i~~D~~----------~----~~~-~~~~~~~~~l~~g 323 (369)
..|.++|.||+|||||..+|....- .. .++.+.. . ... .+...+..++..-
T Consensus 8 g~V~ivG~~nvGKSTLln~l~g~~~~ivs~~~~tTr~~i~~i~~~~~~~l~l~DTpG~~~~~~~l~~~~~~~~~~~l~~a 87 (301)
T 1wf3_A 8 GFVAIVGKPNVGKSTLLNNLLGVKVAPISPRPQTTRKRLRGILTEGRRQIVFVDTPGLHKPMDALGEFMDQEVYEALADV 87 (301)
T ss_dssp EEEEEECSTTSSHHHHHHHHHTSCCSCCCSSSCCCCSCEEEEEEETTEEEEEEECCCCCCCCSHHHHHHHHHHHHHTSSC
T ss_pred CEEEEECCCCCCHHHHHHHHhCCceeeecCCCCceeEEEEEEEEeCCcEEEEecCccccchhhHHHHHHHHHHHHHHhcC
Confidence 4689999999999999999975410 00 1111111 0 011 2344455555443
Q ss_pred C--cEEEeCCCCCHHHHHHHHHHHHhc--CCeEEEEEEeCCH
Q psy4598 324 L--SVVVDNTNPDKESRHRYIEAAKQH--GVRCIAVHMNISK 361 (369)
Q Consensus 324 ~--~vIiD~tn~~~~~r~~~~~la~~~--~~~v~~v~l~~~~ 361 (369)
. .+|+|.++........+.+.+++. +.++.++.=.++.
T Consensus 88 d~il~VvD~~~~~~~~~~~i~~~l~~~~~~~p~ilV~NK~Dl 129 (301)
T 1wf3_A 88 NAVVWVVDLRHPPTPEDELVARALKPLVGKVPILLVGNKLDA 129 (301)
T ss_dssp SEEEEEEETTSCCCHHHHHHHHHHGGGTTTSCEEEEEECGGG
T ss_pred CEEEEEEECCCCCChHHHHHHHHHHhhcCCCCEEEEEECccc
Confidence 3 567898874333334445556666 7777666554543
No 494
>2ged_A SR-beta, signal recognition particle receptor beta subunit; protein transport, G protein, proline isomerization, circular permutation; 2.20A {Saccharomyces cerevisiae}
Probab=93.97 E-value=0.024 Score=48.25 Aligned_cols=25 Identities=28% Similarity=0.490 Sum_probs=21.6
Q ss_pred ccEEEEEEcCCCCcHHHHHHHHhcc
Q psy4598 271 LDSVLIMIGSQGSGKSSFVSTYLKP 295 (369)
Q Consensus 271 ~~~lIll~G~pGSGKSTla~~L~~~ 295 (369)
...-|+++|++||||||+...|...
T Consensus 47 ~~~~i~vvG~~g~GKSsll~~l~~~ 71 (193)
T 2ged_A 47 YQPSIIIAGPQNSGKTSLLTLLTTD 71 (193)
T ss_dssp CCCEEEEECCTTSSHHHHHHHHHHS
T ss_pred CCCEEEEECCCCCCHHHHHHHHhcC
Confidence 3457899999999999999999864
No 495
>3ozx_A RNAse L inhibitor; ATP binding cassette protein, hydrolase, translation; HET: ADP; 2.05A {Sulfolobus solfataricus}
Probab=93.96 E-value=0.31 Score=49.37 Aligned_cols=24 Identities=21% Similarity=0.540 Sum_probs=21.4
Q ss_pred cEEEEEEcCCCCcHHHHHHHHhcc
Q psy4598 272 DSVLIMIGSQGSGKSSFVSTYLKP 295 (369)
Q Consensus 272 ~~lIll~G~pGSGKSTla~~L~~~ 295 (369)
-.++.|+|++||||||+.+.|+-.
T Consensus 294 Gei~~i~G~nGsGKSTLl~~l~Gl 317 (538)
T 3ozx_A 294 GEIIGILGPNGIGKTTFARILVGE 317 (538)
T ss_dssp TCEEEEECCTTSSHHHHHHHHTTS
T ss_pred CCEEEEECCCCCCHHHHHHHHhCC
Confidence 368899999999999999999864
No 496
>2fna_A Conserved hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE ADP; 2.00A {Sulfolobus solfataricus} SCOP: a.4.5.11 c.37.1.20
Probab=93.95 E-value=0.071 Score=49.75 Aligned_cols=33 Identities=21% Similarity=0.433 Sum_probs=26.9
Q ss_pred EEEEEEcCCCCcHHHHHHHHhccC--CcEEEeCCc
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLKPL--NYTTVNRDT 305 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~~~--~~~~i~~D~ 305 (369)
.++++.|++|+||||+++.+.+.. ...+++...
T Consensus 31 ~~v~i~G~~G~GKT~L~~~~~~~~~~~~~~~~~~~ 65 (357)
T 2fna_A 31 PITLVLGLRRTGKSSIIKIGINELNLPYIYLDLRK 65 (357)
T ss_dssp SEEEEEESTTSSHHHHHHHHHHHHTCCEEEEEGGG
T ss_pred CcEEEECCCCCCHHHHHHHHHHhcCCCEEEEEchh
Confidence 489999999999999999998764 456777553
No 497
>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}
Probab=93.92 E-value=0.17 Score=53.33 Aligned_cols=106 Identities=18% Similarity=0.195 Sum_probs=70.2
Q ss_pred ceEEEEecCCceeecCCCCCCCCCccccccccccHHHHHHHHHHCCcEEEEEecCCCcCCCCCCHHHHHHHHHHHHHHcC
Q psy4598 25 AKIASFDLDGTLITTKSGKVFPVDTHDWKLLFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSLN 104 (369)
Q Consensus 25 ~k~~~fDlDgTLi~~~sg~~~~~~~~d~~~~~p~v~~~L~~L~~~G~~i~i~TNq~gi~~~~~~~~~~~~~i~~~l~~l~ 104 (369)
.+++++..||+++.-- ...|- +-|+++++|++|+++|++++++|.-. ..-...+.+++|
T Consensus 534 ~~vl~va~d~~~~G~i-------~i~D~--i~~~~~~aI~~L~~~Gi~v~mlTGd~------------~~~a~~ia~~lg 592 (736)
T 3rfu_A 534 ASVMFMAVDGKTVALL-------VVEDP--IKSSTPETILELQQSGIEIVMLTGDS------------KRTAEAVAGTLG 592 (736)
T ss_dssp CEEEEEEETTEEEEEE-------EEECC--BCSSHHHHHHHHHHHTCEEEEECSSC------------HHHHHHHHHHHT
T ss_pred CeEEEEEECCEEEEEE-------Eeecc--chhhHHHHHHHHHHCCCeEEEECCCC------------HHHHHHHHHHcC
Confidence 4788889999876421 11121 57999999999999999999999832 234566778888
Q ss_pred CCeEEEEecCCCCCCCCchhHHHHHHHHhcCCccccCCccEEeeCccccccccCCCCCCCCCcccHHHHHhCCCCc
Q psy4598 105 VPVQMFVATQYDRYRKPVPGMWEYLSQEKNGDLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAF 180 (369)
Q Consensus 105 i~~~~~~~~~~~~~rKP~~gm~~~~~~~~~~~~~i~~~~s~~VGD~~gr~~~~~~~~~~d~s~~D~~~A~n~Gi~f 180 (369)
+.- +++. - .|.--..+++.+ .-..+.+.||||.. +|..+-..+++-.
T Consensus 593 i~~--v~a~-----~--~P~~K~~~v~~l----~~~g~~V~~vGDG~----------------ND~paL~~AdvGI 639 (736)
T 3rfu_A 593 IKK--VVAE-----I--MPEDKSRIVSEL----KDKGLIVAMAGDGV----------------NDAPALAKADIGI 639 (736)
T ss_dssp CCC--EECS-----C--CHHHHHHHHHHH----HHHSCCEEEEECSS----------------TTHHHHHHSSEEE
T ss_pred CCE--EEEe-----c--CHHHHHHHHHHH----HhcCCEEEEEECCh----------------HhHHHHHhCCEEE
Confidence 731 1111 1 222223333332 22356799999999 8998888887654
No 498
>1u8z_A RAS-related protein RAL-A; GNP, GTP, GMPPNP, GPPNHP, GDP, GTPase, signaling protein; HET: GDP; 1.50A {Saguinus oedipus} SCOP: c.37.1.8 PDB: 1u8y_A* 1u90_A* 1uad_A* 1zc3_A* 1zc4_A* 2kwi_A* 2ke5_A*
Probab=93.92 E-value=0.031 Score=45.82 Aligned_cols=22 Identities=36% Similarity=0.659 Sum_probs=19.5
Q ss_pred EEEEEEcCCCCcHHHHHHHHhc
Q psy4598 273 SVLIMIGSQGSGKSSFVSTYLK 294 (369)
Q Consensus 273 ~lIll~G~pGSGKSTla~~L~~ 294 (369)
.-|+++|.+|+||||+.+++..
T Consensus 5 ~~i~v~G~~~~GKssl~~~l~~ 26 (168)
T 1u8z_A 5 HKVIMVGSGGVGKSALTLQFMY 26 (168)
T ss_dssp EEEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHHHh
Confidence 3578999999999999999975
No 499
>2qm8_A GTPase/ATPase; G protein, G3E, metallochaperone, chaperone; HET: MSE; 1.70A {Methylobacterium extorquens} SCOP: c.37.1.10 PDB: 2qm7_A*
Probab=93.91 E-value=0.039 Score=52.50 Aligned_cols=25 Identities=20% Similarity=0.210 Sum_probs=22.0
Q ss_pred cccEEEEEEcCCCCcHHHHHHHHhc
Q psy4598 270 ALDSVLIMIGSQGSGKSSFVSTYLK 294 (369)
Q Consensus 270 ~~~~lIll~G~pGSGKSTla~~L~~ 294 (369)
....++.|+|+|||||||+.+.+..
T Consensus 53 ~~g~~v~i~G~~GaGKSTLl~~l~g 77 (337)
T 2qm8_A 53 GRAIRVGITGVPGVGKSTTIDALGS 77 (337)
T ss_dssp CCSEEEEEECCTTSCHHHHHHHHHH
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHH
Confidence 3457899999999999999999975
No 500
>2hf9_A Probable hydrogenase nickel incorporation protein HYPB; alpha and beta protein; HET: GSP; 1.90A {Methanocaldococcus jannaschii} PDB: 2hf8_A*
Probab=93.88 E-value=0.034 Score=48.85 Aligned_cols=25 Identities=20% Similarity=0.344 Sum_probs=21.7
Q ss_pred ccEEEEEEcCCCCcHHHHHHHHhcc
Q psy4598 271 LDSVLIMIGSQGSGKSSFVSTYLKP 295 (369)
Q Consensus 271 ~~~lIll~G~pGSGKSTla~~L~~~ 295 (369)
....|+++|.+|+||||+...+...
T Consensus 37 ~~~~i~ivG~~gvGKTtl~~~l~~~ 61 (226)
T 2hf9_A 37 GVVAFDFMGAIGSGKTLLIEKLIDN 61 (226)
T ss_dssp TCEEEEEEESTTSSHHHHHHHHHHH
T ss_pred CCeEEEEEcCCCCCHHHHHHHHHHH
Confidence 4567888899999999999999865
Done!