RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy4598
(369 letters)
>d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3'
phosphatase, middle domain {Mouse (Mus musculus) [TaxId:
10090]}
Length = 195
Score = 185 bits (470), Expect = 4e-58
Identities = 99/196 (50%), Positives = 129/196 (65%), Gaps = 4/196 (2%)
Query: 5 WDIVDNGKLLVFTSNDVCNSAKIASFDLDGTLITTKSGKVFPVDTHDWKLLFSNIESVLK 64
W+ + KLLVFT++ V K+A+FDLDGTLITT+SGKVFP DW++L+ I L+
Sbjct: 3 WESLK--KLLVFTASGVKPQGKVAAFDLDGTLITTRSGKVFPTSPSDWRILYPEIPKKLQ 60
Query: 65 QYLDDGYKLVIFTNQGAIGRKKMSTRDFQAKAEKIIKSLNVPVQMFVATQYDRYRKPVPG 124
+ +GYKLVIFTNQ IGR K+ F+ K E +++ L VP Q+ VAT RKPV G
Sbjct: 61 ELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVPFQVLVATHAGLNRKPVSG 120
Query: 125 MWEYLSQEKNGDLAIDISQSFYAGDAAGRAANWAP-KKKKDFACTDHLFAFNLNLAFFTP 183
MW++L ++ N + I + S + GDAAGR ANWAP +KKKDF+C D LFA N+ L F TP
Sbjct: 121 MWDHLQEQANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPFATP 180
Query: 184 EQIFLNEKAPDFPNLP 199
E+ FL A F LP
Sbjct: 181 EEFFLKWPAARF-ELP 195
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3'
phosphatase, C-terminal domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 172
Score = 76.1 bits (186), Expect = 4e-17
Identities = 48/97 (49%), Positives = 63/97 (64%)
Query: 273 SVLIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTLGSWQKCVSVMKAALDSGLSVVVDNTN 332
V++ +G G+GKS+F+ +L Y VNRDTLGSWQ+CVS +AAL G VV+DNTN
Sbjct: 15 EVVVAVGFPGAGKSTFIQEHLVSAGYVHVNRDTLGSWQRCVSSCQAALRQGKRVVIDNTN 74
Query: 333 PDKESRHRYIEAAKQHGVRCIAVHMNISKEHAKHNIK 369
PD SR RYI+ AK GV C + + E A+HN +
Sbjct: 75 PDVPSRARYIQCAKDAGVPCRCFNFCATIEQARHNNR 111
>d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase
domain {Bacteriophage T4 [TaxId: 10665]}
Length = 149
Score = 45.5 bits (107), Expect = 1e-06
Identities = 20/114 (17%), Positives = 45/114 (39%), Gaps = 1/114 (0%)
Query: 26 KIASFDLDGTLITTKSGKVFPVDTHDWKLLFSNIESVLKQYLDDGYKLVIFTNQGAIGRK 85
K FD+DGTL + ++ D ++ + + K Y GY++V+ + + + ++
Sbjct: 8 KAVIFDVDGTLAKMNGRGPYDLEKCDTDVINPMVVELSKMYALMGYQIVVVSGRESGTKE 67
Query: 86 KMSTRDFQAKAEKIIKSLNVPVQMFVATQYDRYRKPVPGMWEYLSQEKNGDLAI 139
T+ ++ + + VP+ M + RK E + +
Sbjct: 68 D-PTKYYRMTRKWVEDIAGVPLVMQCQREQGDTRKDDVVKEEIFWKHIAPHFDV 120
>d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional
protein HisB, phosphatase domain {Escherichia coli
[TaxId: 562]}
Length = 161
Score = 44.1 bits (103), Expect = 5e-06
Identities = 30/146 (20%), Positives = 46/146 (31%), Gaps = 18/146 (12%)
Query: 24 SAKIASFDLDGTLITTKSGKVFPVDTHDWKLLFSNIESVLKQYLDDGYKLVIFTNQGAIG 83
S K D DGTLI+ + L + GYKLV+ TNQ +G
Sbjct: 1 SQKYLFIDRDGTLISEPPSDFQVDRFDKLA-FEPGVIPQLLKLQKAGYKLVMITNQDGLG 59
Query: 84 RKKMSTRDFQAKAE--------KIIKSLNVPVQMFVATQYDRYRKPVPGMWEYLSQEKNG 135
+ DF + ++ V + + RKP + E E+
Sbjct: 60 TQSFPQADFDGPHNLMMQIFTSQGVQFDEVLICPHLPADECDCRKPKVKLVERYLAEQA- 118
Query: 136 DLAIDISQSFYAGDA-----AGRAAN 156
+D + S+ GD
Sbjct: 119 ---MDRANSYVIGDRATDIQLAENMG 141
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain
{Bacteriophage T4 [TaxId: 10665]}
Length = 152
Score = 35.5 bits (80), Expect = 0.003
Identities = 18/121 (14%), Positives = 39/121 (32%), Gaps = 25/121 (20%)
Query: 274 VLIMIGSQGSGKSSFVSTYLKP------LNYTTVNRDTLGSW------------------ 309
+++ IG GSGKS++ ++ +N + +
Sbjct: 4 IILTIGCPGSGKSTWAREFIAKNPGFYNINRDDYRQSIMAHEERDEYKYTKKKEGIVTGM 63
Query: 310 -QKCVSVMKAALDSGLSVVVDNTNPDKESRHRYIEAAKQHGVRCIAVHMNISKEHAKHNI 368
+ DS V++ +TN + E R + AK++G + ++
Sbjct: 64 QFDTAKSILYGGDSVKGVIISDTNLNPERRLAWETFAKEYGWKVEHKVFDVPWTELVKRN 123
Query: 369 K 369
Sbjct: 124 S 124
>d1bifa1 c.37.1.7 (A:37-249)
6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase,
kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 213
Score = 35.3 bits (80), Expect = 0.006
Identities = 20/148 (13%), Positives = 35/148 (23%), Gaps = 26/148 (17%)
Query: 225 VLIMIGSQGSGKSSF---VSTYLKPLNYTT--VNRDTLGSWQKCVSVMKAALDSVLIMIG 279
+++M+G GK+ ++ YL + T N
Sbjct: 4 LIVMVGLPARGKTYISKKLTRYLNFIGVPTREFNVGQ---------------------YR 42
Query: 280 SQGSGKSSFVSTYLKPLNYTTVNRDTLGSWQKCVSVMKAALDSGLSVVVDNTNPDKESRH 339
+L R + + G V D TN +E R
Sbjct: 43 RDMVKTYKSFEFFLPDNEEGLKIRKQCALAALNDVRKFLSEEGGHVAVFDATNTTRERRA 102
Query: 340 RYIEAAKQHGVRCIAVHMNISKEHAKHN 367
+Q+G + V
Sbjct: 103 MIFNFGEQNGYKTFFVESICVDPEVIAA 130
>d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131
{Bacteroides thetaiotaomicron [TaxId: 818]}
Length = 260
Score = 35.3 bits (80), Expect = 0.008
Identities = 32/249 (12%), Positives = 70/249 (28%), Gaps = 25/249 (10%)
Query: 26 KIASFDLDGTLITTKSGKVFPVDTHDWKLLFSNIESVLKQYLDDGYKLVIFTNQGAIGRK 85
K FD+DGTL++ ++ ++ S IE L+ G K+ I T GR
Sbjct: 2 KALFFDIDGTLVSFETHRIPS----------STIE-ALEAAHAKGLKIFIAT-----GRP 45
Query: 86 KMSTRDFQAKAEKIIKSLNVPVQMFVATQYDRYRKPVPGMWEYLSQEKNGDLAIDISQSF 145
K + ++ + + + + E + + F
Sbjct: 46 KAIINNLSELQDRNLIDGYITMNGAYCFVGEEVIYKSAIPQEEVKAMAAFCEKKGVPCIF 105
Query: 146 YAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFFTPEQIFLNEKAPDFPNLPTFKPRE 205
N + + + ++N P F + + F E
Sbjct: 106 VEEH------NISVCQPNEMVKKIFYDFLHVN---VIPTVSFEEASNKEVIQMTPFITEE 156
Query: 206 VYQKAQSQTIPNIPHDKKQVLIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTLGSWQKCVS 265
++ + ++G K + ++ + G +S
Sbjct: 157 EEKEVLPSIPTCEIGRWYPAFADVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDIS 216
Query: 266 VMKAALDSV 274
+++ A V
Sbjct: 217 MLRHAAIGV 225
>d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 222
Score = 34.7 bits (78), Expect = 0.011
Identities = 18/133 (13%), Positives = 38/133 (28%), Gaps = 4/133 (3%)
Query: 26 KIASFDLDGTLITTKSGKVFPVDTHDWKLLFSNIESVLKQYLDDGYKLVIFTNQGAIGRK 85
++A+FDLDG L F L + + +G + + +
Sbjct: 1 RVAAFDLDGVLALPSIAGAFRRSEEALALPRDFLLGAYQTEFPEGPTEQLMKGKITF-SQ 59
Query: 86 KMSTRDFQAKAEKIIKSLNVPVQMFVATQYDRYR---KPVPGMWEYLSQEKNGDLAIDIS 142
+ D + N+P ++ + + M + K I
Sbjct: 60 WVPLMDESYRKSSKACGANLPENFSISQIFSQAMAARSINRPMLQAAIALKKKGFTTCIV 119
Query: 143 QSFYAGDAAGRAA 155
+ + D R +
Sbjct: 120 TNNWLDDGDKRDS 132
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId:
9606]}
Length = 175
Score = 34.1 bits (77), Expect = 0.013
Identities = 21/149 (14%), Positives = 54/149 (36%), Gaps = 9/149 (6%)
Query: 226 LIMIGSQGSGKSSFVSTYLK-PLNYTTVNRDTLGSWQKCVSVMKAALDSVLIMIGSQGSG 284
+++IG G GKS+ +S + + N + + + + + V + + + Q
Sbjct: 7 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 66
Query: 285 KSSFVSTYLKP----LNYTTVNRDTLGSWQKCVSVMKAALDSGLSVVVDNTNPD-KESRH 339
+ + Y L Y T + ++ + ++ DS + +++ D + R
Sbjct: 67 RRITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRA 126
Query: 340 RYIEAAKQHGVRCIAVHMNISKEHAKHNI 368
+ A+ + + S A +
Sbjct: 127 VPTDEARAFAEKNNLSFIETS---ALDST 152
>d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio
cholerae [TaxId: 666]}
Length = 124
Score = 32.5 bits (74), Expect = 0.020
Identities = 19/84 (22%), Positives = 29/84 (34%), Gaps = 9/84 (10%)
Query: 26 KIASFDLDGTLITTKSGKVFPVDTHDWKLLFSNIESVLKQYLDDGYKLVIFTNQGAI--- 82
K DLDGTL + D + IE L++Y G+++VI T +
Sbjct: 2 KKLIVDLDGTLTQANTS-----DYRNVLPRLDVIE-QLREYHQLGFEIVISTARNMRTYE 55
Query: 83 GRKKMSTRDFQAKAEKIIKSLNVP 106
G + + VP
Sbjct: 56 GNVGKINIHTLPIITEWLDKHQVP 79
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth
inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Length = 168
Score = 32.7 bits (73), Expect = 0.032
Identities = 21/149 (14%), Positives = 36/149 (24%), Gaps = 5/149 (3%)
Query: 226 LIMIGSQGSGKSSFVSTYLK---PLNYTTVNRDTLGSWQKCVSVMKAALDSVLIMIGSQG 282
L + G G GKS+ V +L Y T + +
Sbjct: 5 LAIFGRAGVGKSALVVRFLTKRFIWEYDPTLESTYRHQATIDDEVVSMEILDTAGQEDTI 64
Query: 283 SGKSSFVSTYLKPLNYTTVNRDTLGSWQKCVS--VMKAALDSGLSVVVDNTNPDKESRHR 340
+ L Y +R + + + ++V N SR
Sbjct: 65 QREGHMRWGEGFVLVYDITDRGSFEEVLPLKNILDEIKKPKNVTLILVGNKADLDHSRQV 124
Query: 341 YIEAAKQHGVRCIAVHMNISKEHAKHNIK 369
E ++ S + NI
Sbjct: 125 STEEGEKLATELACAFYECSACTGEGNIT 153
>d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820
{Bacteroides thetaiotaomicron [TaxId: 818]}
Length = 122
Score = 32.1 bits (73), Expect = 0.035
Identities = 8/56 (14%), Positives = 24/56 (42%), Gaps = 8/56 (14%)
Query: 30 FDLDGTLITTKSGKVFPVDTHDWKLLFSNIESVLKQYLDDGYKLVIFTNQGAIGRK 85
D DGT++ + ++ + + +E LK + ++L++++ +
Sbjct: 5 VDFDGTIVEHRYPRIG-------EEIPFAVE-TLKLLQQEKHRLILWSVREGELLD 52
>d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax
[TaxId: 5855]}
Length = 283
Score = 33.4 bits (75), Expect = 0.036
Identities = 20/107 (18%), Positives = 37/107 (34%), Gaps = 16/107 (14%)
Query: 26 KIASFDLDGTLITTKSGKVFPVDTHDWKLLFSNIESVLKQYLDDGYKLVIFTNQGAIGRK 85
K+ D DGTL K KV NI+ +K+ ++ GY + I T GR
Sbjct: 11 KLLLIDFDGTLFVDKDIKVPS----------ENID-AIKEAIEKGYMVSICT-----GRS 54
Query: 86 KMSTRDFQAKAEKIIKSLNVPVQMFVATQYDRYRKPVPGMWEYLSQE 132
K+ + + +++ + + E + +
Sbjct: 55 KVGILSAFGEENLKKMNFYGMPGVYINGTIVYDQIGYTLLDETIETD 101
>d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga
maritima [TaxId: 2336]}
Length = 261
Score = 32.7 bits (73), Expect = 0.050
Identities = 21/168 (12%), Positives = 49/168 (29%), Gaps = 16/168 (9%)
Query: 19 NDVCNSAKIASFDLDGTLITTKSGKVFPVDTHDWKLLFSNIESVLKQYLDDGYKLVIFTN 78
+ V + ++ D+DGT + L L+ + + V FTN
Sbjct: 1 HHVLDKIELFILDMDGTF-------------YLDDSLLPGSLEFLETLKEKNKRFVFFTN 47
Query: 79 QGAIGRKKMSTRDFQAKAEKIIKSLNVPVQM---FVATQYDRYRKPVPGMWEYLSQEKNG 135
++G + + + ++ ++ + ++ R R + G + +
Sbjct: 48 NSSLGAQDYVRKLRNMGVDVPDDAVVTSGEITAEHMLKRFGRCRIFLLGTPQLKKVFEAY 107
Query: 136 DLAIDISQSFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFFTP 183
ID + + + KK F + P
Sbjct: 108 GHVIDEENPDFVVLGFDKTLTYERLKKACILLRKGKFYIATHPDINCP 155
>d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 225
Score = 32.5 bits (72), Expect = 0.051
Identities = 15/108 (13%), Positives = 32/108 (29%), Gaps = 4/108 (3%)
Query: 30 FDLDGTLITTKSGKVFPVDTHDWKLLFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMST 89
FDLDG L V L + ++ +G + + + +
Sbjct: 7 FDLDGVLALPAVFGVLGRTEEALALPRGLLNDAFQKGGPEGATTRLMKGEITLSQWIPLM 66
Query: 90 RDFQAKAEKIIKSLNVPVQMFVATQYDRYR---KPVPGMWEYLSQEKN 134
+ K + K + +P + +D+ K M + +
Sbjct: 67 EENCRKCSETAK-VCLPKNFSIKEIFDKAISARKINRPMLQAALMLRK 113
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 31.4 bits (70), Expect = 0.089
Identities = 22/149 (14%), Positives = 44/149 (29%), Gaps = 9/149 (6%)
Query: 226 LIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTLGSWQKCVSVMKAALDSVLIMIGSQGSGK 285
I+IG G GKS + + + + + + + I +
Sbjct: 6 YIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQESF 65
Query: 286 SSFVSTYLKP-----LNYTTVNRDTLGSWQKCVSVMKAALDSGLSVV-VDNTNPDKESRH 339
S +Y + L Y R+T + + S + ++ + N + + R
Sbjct: 66 RSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLESRRD 125
Query: 340 RYIEAAKQHGVRCIAVHMNISKEHAKHNI 368
E + + M S AK
Sbjct: 126 VKREEGEAFAREHGLIFMETS---AKTAC 151
>d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV)
{Escherichia coli [TaxId: 562]}
Length = 269
Score = 31.8 bits (71), Expect = 0.099
Identities = 10/69 (14%), Positives = 20/69 (28%), Gaps = 16/69 (23%)
Query: 24 SAKIASFDLDGTLITTKSGKVFPVDTHDWKLLFSNIESVLKQYLDDGYKLVIFTNQGAIG 83
+ K+ D+DGT + + ++ G K V+ + G
Sbjct: 1 AVKVIVTDMDGTFL-----------NDAKTYNQPRFMAQYQELKKRGIKFVVAS-----G 44
Query: 84 RKKMSTRDF 92
+ F
Sbjct: 45 NQYYQLISF 53
>d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus
subtilis [TaxId: 1423]}
Length = 285
Score = 31.4 bits (70), Expect = 0.12
Identities = 24/116 (20%), Positives = 39/116 (33%), Gaps = 27/116 (23%)
Query: 26 KIASFDLDGTLITTKSGKVFPVDTHDWKLLFSNIESVLKQYLDDGYKLVIFTNQGAIGRK 85
K+ + DLDGTL+ ++ N L+Q DG ++V+ T GR
Sbjct: 2 KLIAIDLDGTLL-----------NSKHQVSLENEN-ALRQAQRDGIEVVVST-----GRA 44
Query: 86 KMSTRDFQAKAEKIIKSLNVPVQMFVATQYDRYRKPVPGMWEYLSQEKNGDLAIDI 141
I + L + + A + P Y + + A DI
Sbjct: 45 HFD-------VMSIFEPLGIKTWVISANGAVIHD---PEGRLYHHETIDKKRAYDI 90
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus
solfataricus [TaxId: 2287]}
Length = 283
Score = 31.6 bits (70), Expect = 0.14
Identities = 15/102 (14%), Positives = 35/102 (34%), Gaps = 5/102 (4%)
Query: 267 MKAALDSVLIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTLGSWQKCVSVMKAALDSGLSV 326
+K + +++G + +GKSS + + LN + D +K + L
Sbjct: 24 LKGLRAPITLVLGLRRTGKSSIIKIGINELNLPYIYLD----LRKFEERNYISYKDFLLE 79
Query: 327 VVDNTNPDKESRHRYIEAAKQH-GVRCIAVHMNISKEHAKHN 367
+ N + ++A K G+ + + +
Sbjct: 80 LQKEINKLVKRLPSLLKALKNIQGIVIMGNEIKFNWNRKDRL 121
Score = 29.3 bits (64), Expect = 0.70
Identities = 7/30 (23%), Positives = 16/30 (53%)
Query: 223 KQVLIMIGSQGSGKSSFVSTYLKPLNYTTV 252
+ +++G + +GKSS + + LN +
Sbjct: 29 APITLVLGLRRTGKSSIIKIGINELNLPYI 58
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId:
10090]}
Length = 165
Score = 30.8 bits (68), Expect = 0.15
Identities = 17/131 (12%), Positives = 36/131 (27%), Gaps = 10/131 (7%)
Query: 226 LIMIGSQGSGKSSFVSTYLK---PLNYTTVNRDTLGSWQKCVSVMKAALDSVLIMIGSQG 282
+I+IG GK+ + P + + + + G +
Sbjct: 5 IIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGERIKIQ-LWDTAGQER 63
Query: 283 SGKSSFVSTYLKP----LNYTTVNRDTLGSWQKCVSVMK--AALDSGLSVVVDNTNPDKE 336
KS Y Y N + S + K + ++V N +
Sbjct: 64 FRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPAWIEECKQHLLANDIPRILVGNKCDLRS 123
Query: 337 SRHRYIEAAKQ 347
+ + A++
Sbjct: 124 AIQVPTDLAQK 134
>d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli
[TaxId: 562]}
Length = 271
Score = 31.1 bits (69), Expect = 0.16
Identities = 25/186 (13%), Positives = 50/186 (26%), Gaps = 34/186 (18%)
Query: 24 SAKIASFDLDGTLITTKSGKVFPVDTHDWKLLFSNIESVLKQYLDDGYKLVIFTNQGAIG 83
+ K+ + D+DGTL+ D + + + G +V+ T G
Sbjct: 3 AIKLIAIDMDGTLL-----------LPDHTISPAVKN-AIAAARARGVNVVLTT-----G 45
Query: 84 RKKMSTRDFQAKAEKIIKSLNVPVQMFVATQYDRYRKPVPGMWEYLSQEKNGDLAIDISQ 143
R ++ + P + +K G + D
Sbjct: 46 RPYAGVHNYLKELHM-----EQPGDYCITYNGALVQKAADGSTVAQTALSYDDYRFLEKL 100
Query: 144 SFYAGDAAGRAANWAPKKKKDFACTDHLFAFNLNLAFFTPEQIFLNEKAPDFPNLPTFKP 203
S G L+ N +++++T + F+ F P
Sbjct: 101 SREVGSHF------------HALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDP 148
Query: 204 REVYQK 209
+ K
Sbjct: 149 NTQFLK 154
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId:
9606]}
Length = 166
Score = 29.8 bits (66), Expect = 0.27
Identities = 18/140 (12%), Positives = 45/140 (32%), Gaps = 10/140 (7%)
Query: 226 LIMIGSQGSGKSSFVSTYLK-PLNYTTVNRDTLGSWQKCVSVMKAALDSVLIMIGSQGSG 284
I+IG G GKS + + + + + + + V + + Q
Sbjct: 7 YIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERF 66
Query: 285 KSSFVSTYLKP----LNYTTVNRDTLGSWQKCVSVMKAALDSGLSVVVDNTNPDKESRHR 340
++ S Y + Y R T ++ + + +++ D E++
Sbjct: 67 RAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQRD 126
Query: 341 YIEA-----AKQHGVRCIAV 355
A+++G+ +
Sbjct: 127 VTYEEAKQFAEENGLLFLEA 146
>d1f5na2 c.37.1.8 (A:7-283) Interferon-induced guanylate-binding
protein 1 (GBP1), N-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 277
Score = 30.4 bits (68), Expect = 0.28
Identities = 13/72 (18%), Positives = 25/72 (34%), Gaps = 4/72 (5%)
Query: 225 VLIMIGSQGSGKSSFVSTYLKPLN----YTTVNRDTLGSWQKCVSVMKAALDSVLIMIGS 280
V+ ++G +GKS ++ +TV T G W CV K ++++
Sbjct: 34 VVAIVGLYRTGKSYLMNKLAGKKKGFSLGSTVQSHTKGIWMWCVPHPKKPGHILVLLDTE 93
Query: 281 QGSGKSSFVSTY 292
+
Sbjct: 94 GLGDVEKGDNQN 105
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 194
Score = 29.8 bits (66), Expect = 0.34
Identities = 19/150 (12%), Positives = 49/150 (32%), Gaps = 7/150 (4%)
Query: 226 LIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTLGSW--QKCVSVMKAALDSVLIMIGSQ-- 281
L++IG+ G GKS + + YT T+G K V + + + Q
Sbjct: 9 LLLIGNSGVGKSCLLLRFSDD-TYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQER 67
Query: 282 --GSGKSSFVSTYLKPLNYTTVNRDTLGSWQKCVSVMKAALDSGLSVVVDNTNPDKESRH 339
S + ++ + Y ++++ + + + S + ++ D + +
Sbjct: 68 FRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYATSTVLKLLVGNKCDLKDKR 127
Query: 340 RYIEAAKQHGVRCIAVHMNISKEHAKHNIK 369
+ + + N++
Sbjct: 128 VVEYDVAKEFADANKMPFLETSALDSTNVE 157
>d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia
coli [TaxId: 562]}
Length = 197
Score = 29.7 bits (65), Expect = 0.35
Identities = 11/97 (11%), Positives = 26/97 (26%), Gaps = 11/97 (11%)
Query: 30 FDLDGTLITTKSGKVFPVDTHDWKLLFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMST 89
FDL ++ D+ + + + L K + +
Sbjct: 5 FDLGNVIVDI-----------DFNRVLGAWSDLTRIPLASLKKSFHMGEAFHQHERGEIS 53
Query: 90 RDFQAKAEKIIKSLNVPVQMFVATQYDRYRKPVPGMW 126
+ A+A +L + + F + P +
Sbjct: 54 DEAFAEALCHEMALPLSYEQFSHGWQAVFVALRPEVI 90
>d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon
Methanococcus jannaschii [TaxId: 2190]}
Length = 210
Score = 29.8 bits (65), Expect = 0.40
Identities = 6/16 (37%), Positives = 10/16 (62%)
Query: 26 KIASFDLDGTLITTKS 41
K+ FD D TL+ ++
Sbjct: 5 KLILFDFDSTLVNNET 20
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId:
9606]}
Length = 168
Score = 29.3 bits (64), Expect = 0.47
Identities = 17/148 (11%), Positives = 37/148 (25%), Gaps = 8/148 (5%)
Query: 226 LIMIGSQGSGKSSFVSTYLK---PLNYTTVNRDTLGSWQKCVSVMKAALDSVLIMIGSQG 282
++++G+ G GKS+ + S + + G +
Sbjct: 4 VLLLGAPGVGKSALARIFGGVEDGPEAEAAGHTYDRSIVVDGEEASLMVYDIWEQDGGRW 63
Query: 283 SGKSSFVSTYLKP--LNYTTVNRDTLGSWQKCVSVMKAALDSGLSVVVDNTNPDKESRHR 340
+ T S + D ++V N + SR
Sbjct: 64 LPGHCMAMGDAYVIVYSVTDKGSFEKASELRVQLRRARQTDDVPIILVGNKSDLVRSREV 123
Query: 341 YIEAAKQHGVRCIAVHMNISKEHAKHNI 368
++ + V + S A +
Sbjct: 124 SVDEGRACAVVFDCKFIETS---AALHH 148
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 173
Score = 29.3 bits (65), Expect = 0.54
Identities = 24/150 (16%), Positives = 55/150 (36%), Gaps = 11/150 (7%)
Query: 226 LIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTLGSWQKCVSVMKAALDSVLIMIGSQGSGK 285
L++IG G GK+ + + + + + T+G K ++ L + + G +
Sbjct: 9 LLLIGDSGVGKTCVLFRFSED-AFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQER 67
Query: 286 SSFVSTYLKP------LNYTTVNRDTLGSWQKCVSVMKAALDSGLS-VVVDNTNPDKESR 338
++T L Y N + + + + ++ + + +++ N + R
Sbjct: 68 FRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKR 127
Query: 339 HRYIEAAKQHGVRCIAVHMNISKEHAKHNI 368
E ++ + M S AK NI
Sbjct: 128 QVSKERGEKLALDYGIKFMETS---AKANI 154
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 169
Score = 28.9 bits (63), Expect = 0.66
Identities = 9/29 (31%), Positives = 16/29 (55%), Gaps = 3/29 (10%)
Query: 217 NIPHDKKQVLIMIGSQGSGKSSFVSTYLK 245
N+P K L+++G G GKS+ + +
Sbjct: 1 NLPTYK---LVVVGDGGVGKSALTIQFFQ 26
Score = 27.3 bits (59), Expect = 2.3
Identities = 6/20 (30%), Positives = 12/20 (60%)
Query: 275 LIMIGSQGSGKSSFVSTYLK 294
L+++G G GKS+ + +
Sbjct: 7 LVVVGDGGVGKSALTIQFFQ 26
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015
{Agrobacterium tumefaciens [TaxId: 358]}
Length = 176
Score = 28.8 bits (63), Expect = 0.67
Identities = 8/33 (24%), Positives = 14/33 (42%)
Query: 224 QVLIMIGSQGSGKSSFVSTYLKPLNYTTVNRDT 256
+L++ G GSGKS+ V+ +
Sbjct: 5 NILLLSGHPGSGKSTIAEALANLPGVPKVHFHS 37
Score = 28.4 bits (62), Expect = 0.93
Identities = 8/32 (25%), Positives = 14/32 (43%)
Query: 274 VLIMIGSQGSGKSSFVSTYLKPLNYTTVNRDT 305
+L++ G GSGKS+ V+ +
Sbjct: 6 ILLLSGHPGSGKSTIAEALANLPGVPKVHFHS 37
>d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]}
Length = 250
Score = 29.3 bits (64), Expect = 0.74
Identities = 12/64 (18%), Positives = 20/64 (31%), Gaps = 13/64 (20%)
Query: 30 FDLDGTLITTKSGKVFPVDTHDWKLLFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMST 89
D+DG L + L +D G LV+ TN + + ++
Sbjct: 8 CDIDGVL-------------MHDNVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLAN 54
Query: 90 RDFQ 93
R
Sbjct: 55 RFAT 58
>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal
recognition particle receptor FtsY {Thermotoga maritima
[TaxId: 2336]}
Length = 213
Score = 28.9 bits (64), Expect = 0.75
Identities = 7/24 (29%), Positives = 16/24 (66%)
Query: 217 NIPHDKKQVLIMIGSQGSGKSSFV 240
N+P + V++++G G+GK++
Sbjct: 5 NVPPEPPFVIMVVGVNGTGKTTSC 28
>d1in1a_ c.15.1.2 (A:) DNA ligase III alpha {Human (Homo sapiens)
[TaxId: 9606]}
Length = 88
Score = 27.6 bits (61), Expect = 0.84
Identities = 8/47 (17%), Positives = 15/47 (31%), Gaps = 6/47 (12%)
Query: 322 SGLSVVVDNTNPDKESRHRYIEAAKQHGVRCIAVHMNISKEHAKHNI 368
+G+ + + + PD RY A + A H +
Sbjct: 18 TGVRLYLPPSTPDFSRLRRYFVA---FDGD---LVQEFDMTSATHVL 58
>d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate
phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii
[TaxId: 53953]}
Length = 243
Score = 28.9 bits (63), Expect = 0.99
Identities = 7/52 (13%), Positives = 20/52 (38%), Gaps = 14/52 (26%)
Query: 26 KIASFDLDGTLITTKSGKVFPVDTHDWKLLFSNIESVLKQYLDDGYKLVIFT 77
++ D+D TLI + ++++ D G++++ +
Sbjct: 3 RLIFLDIDKTLIPGYE--------------PDPAKPIIEELKDMGFEIIFNS 40
>d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546)
{Staphylococcus aureus [TaxId: 1280]}
Length = 380
Score = 29.0 bits (64), Expect = 1.1
Identities = 6/60 (10%), Positives = 22/60 (36%), Gaps = 7/60 (11%)
Query: 310 QKCVSVMKAALDSGLSVVVDNTNPDKESRHRYIEAAKQHGVRCIAVHMNISKEHAKHNIK 369
+ ++ ++ +V ++ D + +A++ G I + + A ++
Sbjct: 303 ESYINKQDNIVNKDDVFIVGDSLAD-------LLSAQKIGATFIGTLTGLKGKDAAGELE 355
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId:
10090]}
Length = 179
Score = 28.5 bits (62), Expect = 1.1
Identities = 7/41 (17%), Positives = 18/41 (43%), Gaps = 3/41 (7%)
Query: 226 LIMIGSQGSGKSSFVSTYLK---PLNYTTVNRDTLGSWQKC 263
++++G GK++ + + K P NY + + +
Sbjct: 5 IVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEI 45
Score = 28.5 bits (62), Expect = 1.1
Identities = 7/41 (17%), Positives = 18/41 (43%), Gaps = 3/41 (7%)
Query: 275 LIMIGSQGSGKSSFVSTYLK---PLNYTTVNRDTLGSWQKC 312
++++G GK++ + + K P NY + + +
Sbjct: 5 IVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEI 45
>d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas
aeruginosa [TaxId: 287]}
Length = 206
Score = 28.3 bits (62), Expect = 1.2
Identities = 6/13 (46%), Positives = 9/13 (69%)
Query: 26 KIASFDLDGTLIT 38
+IA DL+G L+
Sbjct: 3 EIACLDLEGVLVP 15
>d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 217
Score = 28.3 bits (62), Expect = 1.3
Identities = 16/124 (12%), Positives = 40/124 (32%), Gaps = 7/124 (5%)
Query: 24 SAKIASFDLDGTLITTKSGKVFPVDTHDWKLLFSNIESVLKQYLDDGYKLVIFTNQGAIG 83
SA FD+D T+I + + + + ++ + +
Sbjct: 9 SADAVCFDVDSTVIREEGIDEL----AKICGVEDAVSEMTRRAMGGAVPFKAALTERLAL 64
Query: 84 RKKMSTRDFQAKAEKIIKSLNVPVQMFVATQYDRYRKP--VPGMWEYLSQEKNGDLAIDI 141
+ + + AE+ L ++ V+ +R + + G + + + L I
Sbjct: 65 IQPSREQVQRLIAEQPPH-LTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPA 123
Query: 142 SQSF 145
+ F
Sbjct: 124 TNVF 127
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId:
9606]}
Length = 186
Score = 27.9 bits (61), Expect = 1.3
Identities = 13/70 (18%), Positives = 24/70 (34%), Gaps = 3/70 (4%)
Query: 275 LIMIGSQGSGKSSFVSTYLK---PLNYTTVNRDTLGSWQKCVSVMKAALDSGLSVVVDNT 331
L+ +G G GK++F+ Y + T + + SG + V
Sbjct: 8 LLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHLQ 67
Query: 332 NPDKESRHRY 341
D + R+
Sbjct: 68 LWDTAGQERF 77
Score = 27.2 bits (59), Expect = 2.3
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 226 LIMIGSQGSGKSSFVSTYLK 245
L+ +G G GK++F+ Y
Sbjct: 8 LLALGDSGVGKTTFLYRYTD 27
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 184
Score = 28.1 bits (61), Expect = 1.3
Identities = 16/93 (17%), Positives = 38/93 (40%), Gaps = 5/93 (5%)
Query: 275 LIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTLGSWQKCVSVMKAALDSGLSVVVDNTNPD 334
+I++G G GK+S ++ Y+ ++ + T+G+ VM V + +
Sbjct: 5 VIILGDSGVGKTSLMNQYVNK-KFSNQYKATIGADFLTKEVM----VDDRLVTMQIWDTA 59
Query: 335 KESRHRYIEAAKQHGVRCIAVHMNISKEHAKHN 367
+ R + + A G C + +++ +
Sbjct: 60 GQERFQSLGVAFYRGADCCVLVFDVTAPNTFKT 92
Score = 27.7 bits (60), Expect = 1.7
Identities = 7/20 (35%), Positives = 14/20 (70%)
Query: 226 LIMIGSQGSGKSSFVSTYLK 245
+I++G G GK+S ++ Y+
Sbjct: 5 VIILGDSGVGKTSLMNQYVN 24
>d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 164
Score = 27.9 bits (61), Expect = 1.5
Identities = 15/66 (22%), Positives = 22/66 (33%), Gaps = 12/66 (18%)
Query: 26 KIASFDLDGTLITT-----------KSGKVFPVDTHDWKL-LFSNIESVLKQYLDDGYKL 73
K+A FDLD TL KS D + L+ + VL + G +
Sbjct: 6 KLAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQNIQLYPEVPEVLGRLQSLGVPV 65
Query: 74 VIFTNQ 79
+
Sbjct: 66 AAASRT 71
Score = 25.9 bits (56), Expect = 5.5
Identities = 9/44 (20%), Positives = 17/44 (38%), Gaps = 7/44 (15%)
Query: 326 VVVDNTNPDKESRHRYIEAAKQHGVRCIAVHMNISKEHAKHNIK 369
V D+ N + I + GV CI + +S + ++
Sbjct: 119 VFFDDENRN-------IIDVGRLGVTCIHIRDGMSLQTLTQGLE 155
>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA
{Escherichia coli [TaxId: 562]}
Length = 279
Score = 28.4 bits (62), Expect = 1.5
Identities = 10/51 (19%), Positives = 24/51 (47%), Gaps = 13/51 (25%)
Query: 191 KAPDFPNLPTFKPREVYQKAQSQTIPNIPHDKKQVLIMIGSQGSGKSSFVS 241
+ PD P+L S + +I ++ +++++G G GK++ +
Sbjct: 1 QRPDIPSL-------------SALVDDIARNEHGLIMLMGKGGVGKTTMAA 38
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin
(Saguinus oedipus) [TaxId: 9490]}
Length = 168
Score = 27.6 bits (60), Expect = 1.5
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 226 LIMIGSQGSGKSSFVSTYLK 245
+IM+GS G GKS+ ++
Sbjct: 7 VIMVGSGGVGKSALTLQFMY 26
Score = 27.6 bits (60), Expect = 1.5
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 275 LIMIGSQGSGKSSFVSTYLK 294
+IM+GS G GKS+ ++
Sbjct: 7 VIMVGSGGVGKSALTLQFMY 26
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Length = 177
Score = 27.7 bits (60), Expect = 1.6
Identities = 5/20 (25%), Positives = 10/20 (50%)
Query: 226 LIMIGSQGSGKSSFVSTYLK 245
L+++G GK+ + K
Sbjct: 5 LVIVGDGACGKTCLLIVNSK 24
Score = 27.7 bits (60), Expect = 1.6
Identities = 5/20 (25%), Positives = 10/20 (50%)
Query: 275 LIMIGSQGSGKSSFVSTYLK 294
L+++G GK+ + K
Sbjct: 5 LVIVGDGACGKTCLLIVNSK 24
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus)
[TaxId: 10029]}
Length = 186
Score = 27.7 bits (60), Expect = 1.7
Identities = 8/43 (18%), Positives = 15/43 (34%), Gaps = 1/43 (2%)
Query: 222 KKQV-LIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTLGSWQKC 263
KK L+ +G +GK++ + V S +
Sbjct: 11 KKTGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELT 53
Score = 27.0 bits (58), Expect = 3.1
Identities = 6/38 (15%), Positives = 13/38 (34%)
Query: 275 LIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTLGSWQKC 312
L+ +G +GK++ + V S +
Sbjct: 16 LVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELT 53
>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence
recognition protein Ffh {Archaeon Acidianus ambivalens
[TaxId: 2283]}
Length = 211
Score = 27.8 bits (61), Expect = 1.8
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 217 NIPHDKKQVLIMIGSQGSGKSSFV 240
IP V++++G QG+GK++
Sbjct: 6 VIPDKIPYVIMLVGVQGTGKATTA 29
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 27.6 bits (60), Expect = 1.8
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 226 LIMIGSQGSGKSSFVSTYLK 245
+ + G+ G GKSS V ++K
Sbjct: 5 VAVFGAGGVGKSSLVLRFVK 24
Score = 27.6 bits (60), Expect = 1.8
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 275 LIMIGSQGSGKSSFVSTYLK 294
+ + G+ G GKSS V ++K
Sbjct: 5 VAVFGAGGVGKSSLVLRFVK 24
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Length = 183
Score = 27.7 bits (60), Expect = 1.9
Identities = 4/20 (20%), Positives = 10/20 (50%)
Query: 226 LIMIGSQGSGKSSFVSTYLK 245
+++G GK+ + +Y
Sbjct: 8 CVVVGDGAVGKTCLLISYTT 27
Score = 27.7 bits (60), Expect = 1.9
Identities = 4/20 (20%), Positives = 10/20 (50%)
Query: 275 LIMIGSQGSGKSSFVSTYLK 294
+++G GK+ + +Y
Sbjct: 8 CVVVGDGAVGKTCLLISYTT 27
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Length = 174
Score = 27.6 bits (60), Expect = 1.9
Identities = 8/20 (40%), Positives = 14/20 (70%)
Query: 226 LIMIGSQGSGKSSFVSTYLK 245
+I++G G GKSS ++ Y+
Sbjct: 9 VILLGDGGVGKSSLMNRYVT 28
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 27.6 bits (60), Expect = 1.9
Identities = 6/20 (30%), Positives = 13/20 (65%)
Query: 226 LIMIGSQGSGKSSFVSTYLK 245
++++GS G GKS+ ++
Sbjct: 6 VVVLGSGGVGKSALTVQFVT 25
Score = 27.6 bits (60), Expect = 1.9
Identities = 6/20 (30%), Positives = 13/20 (65%)
Query: 275 LIMIGSQGSGKSSFVSTYLK 294
++++GS G GKS+ ++
Sbjct: 6 VVVLGSGGVGKSALTVQFVT 25
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 27.6 bits (60), Expect = 1.9
Identities = 7/20 (35%), Positives = 14/20 (70%)
Query: 226 LIMIGSQGSGKSSFVSTYLK 245
L+++GS G GKS+ +++
Sbjct: 6 LVVLGSGGVGKSALTVQFVQ 25
Score = 27.6 bits (60), Expect = 1.9
Identities = 7/20 (35%), Positives = 14/20 (70%)
Query: 275 LIMIGSQGSGKSSFVSTYLK 294
L+++GS G GKS+ +++
Sbjct: 6 LVVLGSGGVGKSALTVQFVQ 25
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId:
9606]}
Length = 164
Score = 27.6 bits (60), Expect = 1.9
Identities = 6/20 (30%), Positives = 13/20 (65%)
Query: 226 LIMIGSQGSGKSSFVSTYLK 245
L+ +G Q GK+S ++ ++
Sbjct: 3 LVFLGEQSVGKTSLITRFMY 22
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 164
Score = 27.4 bits (59), Expect = 2.0
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 226 LIMIGSQGSGKSSFVSTYLK 245
++++G+ GKSS + Y K
Sbjct: 5 MVVVGNGAVGKSSMIQRYCK 24
Score = 27.4 bits (59), Expect = 2.0
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 275 LIMIGSQGSGKSSFVSTYLK 294
++++G+ GKSS + Y K
Sbjct: 5 MVVVGNGAVGKSSMIQRYCK 24
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 27.3 bits (59), Expect = 2.0
Identities = 6/20 (30%), Positives = 13/20 (65%)
Query: 226 LIMIGSQGSGKSSFVSTYLK 245
L+++G G GKS+ +++
Sbjct: 9 LVVVGGGGVGKSALTIQFIQ 28
Score = 27.3 bits (59), Expect = 2.0
Identities = 6/20 (30%), Positives = 13/20 (65%)
Query: 275 LIMIGSQGSGKSSFVSTYLK 294
L+++G G GKS+ +++
Sbjct: 9 LVVVGGGGVGKSALTIQFIQ 28
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Length = 191
Score = 27.7 bits (60), Expect = 2.0
Identities = 4/20 (20%), Positives = 10/20 (50%)
Query: 226 LIMIGSQGSGKSSFVSTYLK 245
+++G GK+ + +Y
Sbjct: 6 CVVVGDGAVGKTCLLISYTT 25
Score = 27.7 bits (60), Expect = 2.0
Identities = 4/20 (20%), Positives = 10/20 (50%)
Query: 275 LIMIGSQGSGKSSFVSTYLK 294
+++G GK+ + +Y
Sbjct: 6 CVVVGDGAVGKTCLLISYTT 25
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 167
Score = 27.3 bits (59), Expect = 2.0
Identities = 13/79 (16%), Positives = 27/79 (34%)
Query: 226 LIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTLGSWQKCVSVMKAALDSVLIMIGSQGSGK 285
+ ++G G GKSS + +++ +N S+ + L LI +
Sbjct: 7 VCLLGDTGVGKSSIMWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGLERF 66
Query: 286 SSFVSTYLKPLNYTTVNRD 304
+ Y + + D
Sbjct: 67 RALAPMYYRGSAAAIIVYD 85
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus
halodurans [TaxId: 86665]}
Length = 176
Score = 27.3 bits (59), Expect = 2.0
Identities = 8/30 (26%), Positives = 14/30 (46%)
Query: 223 KQVLIMIGSQGSGKSSFVSTYLKPLNYTTV 252
K++ I+ G G GKS+ L+ +
Sbjct: 2 KKLYIITGPAGVGKSTTCKRLAAQLDNSAY 31
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase
{Streptomyces venezuelae [TaxId: 54571]}
Length = 178
Score = 27.3 bits (59), Expect = 2.0
Identities = 7/42 (16%), Positives = 14/42 (33%)
Query: 222 KKQVLIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTLGSWQKC 263
+++I+ G +GKS V L + +
Sbjct: 2 TTRMIILNGGSSAGKSGIVRCLQSVLPEPWLAFGVDSLIEAM 43
>d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK
{Escherichia coli [TaxId: 562]}
Length = 327
Score = 27.9 bits (61), Expect = 2.0
Identities = 7/28 (25%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Query: 219 PHDKKQVLIMI-GSQGSGKSSFVSTYLK 245
P+ + + + G+ G+GKS+F+ +
Sbjct: 49 PYCGNTLRLGVTGTPGAGKSTFLEAFGM 76
>d1tuea_ c.37.1.20 (A:) Replication protein E1 helicase domain
{Human papillomavirus type 18 [TaxId: 333761]}
Length = 205
Score = 27.5 bits (61), Expect = 2.1
Identities = 26/134 (19%), Positives = 49/134 (36%), Gaps = 26/134 (19%)
Query: 217 NIPHDKKQVLIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTLGS---WQKCVSVMKAALDS 273
P KK L+ G +GKS F +++ + ++ S + A LD
Sbjct: 49 GTP--KKNCLVFCGPANTGKSYFGMSFIHFIQGAVISFVNSTSHFWLEPLTDTKVAMLDD 106
Query: 274 VLIMIGSQGSGKSSFVSTYLKPL---NYTTVNRDTLGSWQ-KCVSVMKAALDSGLSVVVD 329
++ TY++ N +++R Q KC ++ +
Sbjct: 107 ATTTCW-------TYFDTYMRNALDGNPISIDRKHKPLIQLKCPPIL----------LTT 149
Query: 330 NTNPDKESRHRYIE 343
N +P K++R Y+E
Sbjct: 150 NIHPAKDNRWPYLE 163
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 27.3 bits (59), Expect = 2.2
Identities = 8/20 (40%), Positives = 15/20 (75%)
Query: 226 LIMIGSQGSGKSSFVSTYLK 245
L+++G G+GK++FV +L
Sbjct: 6 LVLVGDGGTGKTTFVKRHLT 25
Score = 27.3 bits (59), Expect = 2.2
Identities = 8/20 (40%), Positives = 15/20 (75%)
Query: 275 LIMIGSQGSGKSSFVSTYLK 294
L+++G G+GK++FV +L
Sbjct: 6 LVLVGDGGTGKTTFVKRHLT 25
>d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly
(Drosophila melanogaster) [TaxId: 7227]}
Length = 197
Score = 27.3 bits (59), Expect = 2.2
Identities = 9/42 (21%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 222 KKQVLIMI-GSQGSGKSSFVSTYLKPLNYTTVNRDTLGSWQK 262
+ ++I G+ GSGK+++++ + K N + + + W+
Sbjct: 7 TQPFTVLIEGNIGSGKTTYLNHFEKYKNDICLLTEPVEKWRN 48
Score = 25.4 bits (54), Expect = 9.4
Identities = 8/33 (24%), Positives = 19/33 (57%)
Query: 279 GSQGSGKSSFVSTYLKPLNYTTVNRDTLGSWQK 311
G+ GSGK+++++ + K N + + + W+
Sbjct: 16 GNIGSGKTTYLNHFEKYKNDICLLTEPVEKWRN 48
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId:
9606]}
Length = 185
Score = 27.3 bits (59), Expect = 2.4
Identities = 4/20 (20%), Positives = 10/20 (50%)
Query: 226 LIMIGSQGSGKSSFVSTYLK 245
+++G GK+ + +Y
Sbjct: 12 CVVVGDGAVGKTCLLMSYAN 31
Score = 27.3 bits (59), Expect = 2.4
Identities = 4/20 (20%), Positives = 10/20 (50%)
Query: 275 LIMIGSQGSGKSSFVSTYLK 294
+++G GK+ + +Y
Sbjct: 12 CVVVGDGAVGKTCLLMSYAN 31
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 175
Score = 27.3 bits (59), Expect = 2.6
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 226 LIMIGSQGSGKSSFVSTYLK 245
L ++G SGKSS + +L
Sbjct: 8 LGVLGDARSGKSSLIHRFLT 27
Score = 27.3 bits (59), Expect = 2.6
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 275 LIMIGSQGSGKSSFVSTYLK 294
L ++G SGKSS + +L
Sbjct: 8 LGVLGDARSGKSSLIHRFLT 27
>d1wdds_ d.73.1.1 (S:) Ribulose 1,5-bisphosphate
carboxylase-oxygenase {Rice (Oryza sativa) [TaxId:
4530]}
Length = 122
Score = 26.4 bits (58), Expect = 2.7
Identities = 8/39 (20%), Positives = 14/39 (35%)
Query: 40 KSGKVFPVDTHDWKLLFSNIESVLKQYLDDGYKLVIFTN 78
K+ D + +E K Y D +++ F N
Sbjct: 67 TMWKLPMFGCTDATQVLKELEEAKKAYPDAFVRIIGFDN 105
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 175
Score = 27.0 bits (58), Expect = 2.7
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 226 LIMIGSQGSGKSSFVSTYLK 245
+I++G G GK+S + Y+
Sbjct: 5 VIILGDSGVGKTSLMHRYVN 24
Score = 27.0 bits (58), Expect = 2.7
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 275 LIMIGSQGSGKSSFVSTYLK 294
+I++G G GK+S + Y+
Sbjct: 5 VIILGDSGVGKTSLMHRYVN 24
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 26.9 bits (58), Expect = 2.8
Identities = 6/20 (30%), Positives = 13/20 (65%)
Query: 226 LIMIGSQGSGKSSFVSTYLK 245
L+++G G GKS+ +++
Sbjct: 8 LVVVGGGGVGKSALTIQFIQ 27
Score = 26.9 bits (58), Expect = 2.8
Identities = 6/20 (30%), Positives = 13/20 (65%)
Query: 275 LIMIGSQGSGKSSFVSTYLK 294
L+++G G GKS+ +++
Sbjct: 8 LVVVGGGGVGKSALTIQFIQ 27
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId:
9606]}
Length = 177
Score = 27.1 bits (59), Expect = 2.8
Identities = 11/57 (19%), Positives = 20/57 (35%), Gaps = 1/57 (1%)
Query: 226 LIMIGSQGSGKSSFVSTYLK-PLNYTTVNRDTLGSWQKCVSVMKAALDSVLIMIGSQ 281
+++IG G GKSS + + + + K +SV + Q
Sbjct: 10 ILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQ 66
Score = 26.7 bits (58), Expect = 3.3
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 275 LIMIGSQGSGKSSFVSTYLK 294
+++IG G GKSS + +
Sbjct: 10 ILIIGESGVGKSSLLLRFTD 29
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF6 [TaxId: 9606]}
Length = 173
Score = 26.8 bits (58), Expect = 2.9
Identities = 7/34 (20%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 222 KKQV-LIMIGSQGSGKSSFVSTYLKPLNYTTVNR 254
K++ ++M+G +GK++ + + TT+
Sbjct: 10 NKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPT 43
Score = 26.1 bits (56), Expect = 5.8
Identities = 6/29 (20%), Positives = 15/29 (51%)
Query: 275 LIMIGSQGSGKSSFVSTYLKPLNYTTVNR 303
++M+G +GK++ + + TT+
Sbjct: 15 ILMLGLDAAGKTTILYKLKLGQSVTTIPT 43
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 166
Score = 26.9 bits (58), Expect = 2.9
Identities = 6/20 (30%), Positives = 13/20 (65%)
Query: 226 LIMIGSQGSGKSSFVSTYLK 245
L+++G+ G GKS+ ++
Sbjct: 6 LVVVGAGGVGKSALTIQLIQ 25
Score = 26.9 bits (58), Expect = 2.9
Identities = 6/20 (30%), Positives = 13/20 (65%)
Query: 275 LIMIGSQGSGKSSFVSTYLK 294
L+++G+ G GKS+ ++
Sbjct: 6 LVVVGAGGVGKSALTIQLIQ 25
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId:
9606]}
Length = 174
Score = 26.8 bits (58), Expect = 2.9
Identities = 6/20 (30%), Positives = 14/20 (70%)
Query: 226 LIMIGSQGSGKSSFVSTYLK 245
++IG+ G+GKS + +++
Sbjct: 8 FLVIGNAGTGKSCLLHQFIE 27
Score = 26.8 bits (58), Expect = 2.9
Identities = 6/20 (30%), Positives = 14/20 (70%)
Query: 275 LIMIGSQGSGKSSFVSTYLK 294
++IG+ G+GKS + +++
Sbjct: 8 FLVIGNAGTGKSCLLHQFIE 27
>d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c
{Streptococcus mutans [TaxId: 1309]}
Length = 253
Score = 27.3 bits (59), Expect = 2.9
Identities = 18/106 (16%), Positives = 33/106 (31%), Gaps = 27/106 (25%)
Query: 30 FDLDGTLITTKSGKVFPVDTHDWKLLFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMST 89
DLDGT+ + K E +K+ + ++ TN +T
Sbjct: 7 IDLDGTI-------------YKGKDRIPAGEDFVKRLQERQLPYILVTNN--------TT 45
Query: 90 RDFQAKAEKIIKSLNVPVQMFVATQYDRYRKPVPGMWEYLSQEKNG 135
R + E + S N+ + +Y++ K G
Sbjct: 46 RTPEMVQEMLATSFNIKTPLET------IYTATLATIDYMNDMKRG 85
>d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188
{Enterococcus faecalis [TaxId: 1351]}
Length = 253
Score = 27.3 bits (59), Expect = 2.9
Identities = 8/56 (14%), Positives = 17/56 (30%), Gaps = 13/56 (23%)
Query: 30 FDLDGTLITTKSGKVFPVDTHDWKLLFSNIESVLKQYLDDGYKLVIFTNQGAIGRK 85
DLDGT+ + K + +++ + + TN +
Sbjct: 7 IDLDGTI-------------YLGKEPIPAGKRFVERLQEKDLPFLFVTNNTTKSPE 49
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 26.9 bits (58), Expect = 3.0
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 226 LIMIGSQGSGKSSFVSTYLK 245
L+++G GKSS V ++K
Sbjct: 9 LVLLGESAVGKSSLVLRFVK 28
Score = 26.9 bits (58), Expect = 3.0
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 275 LIMIGSQGSGKSSFVSTYLK 294
L+++G GKSS V ++K
Sbjct: 9 LVLLGESAVGKSSLVLRFVK 28
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal
recognition particle receptor FtsY {Thermus aquaticus
[TaxId: 271]}
Length = 207
Score = 27.0 bits (59), Expect = 3.0
Identities = 6/20 (30%), Positives = 14/20 (70%)
Query: 221 DKKQVLIMIGSQGSGKSSFV 240
K +V++++G G GK++ +
Sbjct: 4 PKGRVVLVVGVNGVGKTTTI 23
>d1a7ja_ c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter sphaeroides
[TaxId: 1063]}
Length = 288
Score = 27.2 bits (60), Expect = 3.1
Identities = 9/22 (40%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
Query: 222 KKQVLIMI-GSQGSGKSSFVST 242
KK +I + GS G+G S+ T
Sbjct: 2 KKHPIISVTGSSGAGTSTVKHT 23
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo
sapiens) [TaxId: 9606]}
Length = 167
Score = 26.6 bits (57), Expect = 3.2
Identities = 5/20 (25%), Positives = 12/20 (60%)
Query: 226 LIMIGSQGSGKSSFVSTYLK 245
+ ++G + GKSS +++
Sbjct: 7 IAILGYRSVGKSSLTIQFVE 26
Score = 26.6 bits (57), Expect = 3.2
Identities = 5/20 (25%), Positives = 12/20 (60%)
Query: 275 LIMIGSQGSGKSSFVSTYLK 294
+ ++G + GKSS +++
Sbjct: 7 IAILGYRSVGKSSLTIQFVE 26
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId:
9606]}
Length = 167
Score = 26.8 bits (58), Expect = 3.2
Identities = 6/20 (30%), Positives = 12/20 (60%)
Query: 226 LIMIGSQGSGKSSFVSTYLK 245
++++G GK+S V Y +
Sbjct: 6 VVLLGEGCVGKTSLVLRYCE 25
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 170
Score = 26.9 bits (58), Expect = 3.3
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 226 LIMIGSQGSGKSSFVSTYLK 245
L+++G GKSS V ++
Sbjct: 6 LVLLGEAAVGKSSIVLRFVS 25
Score = 26.9 bits (58), Expect = 3.3
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 275 LIMIGSQGSGKSSFVSTYLK 294
L+++G GKSS V ++
Sbjct: 6 LVLLGEAAVGKSSIVLRFVS 25
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 26.7 bits (58), Expect = 3.5
Identities = 6/20 (30%), Positives = 13/20 (65%)
Query: 226 LIMIGSQGSGKSSFVSTYLK 245
+++IG+ G GK+ V + +
Sbjct: 8 IVLIGNAGVGKTCLVRRFTQ 27
Score = 26.7 bits (58), Expect = 3.5
Identities = 6/20 (30%), Positives = 13/20 (65%)
Query: 275 LIMIGSQGSGKSSFVSTYLK 294
+++IG+ G GK+ V + +
Sbjct: 8 IVLIGNAGVGKTCLVRRFTQ 27
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955
{Pyrococcus abyssi [TaxId: 29292]}
Length = 244
Score = 26.9 bits (58), Expect = 3.6
Identities = 13/78 (16%), Positives = 28/78 (35%), Gaps = 13/78 (16%)
Query: 274 VLIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTLGSWQKCVSVMKAALDSGLSVVVDNTNP 333
+++ +G+ GSGK++ + + L K V LD+G+ + +
Sbjct: 2 IVVFVGTAGSGKTTLTGEFGR----------YLEDNYKVAYV---NLDTGVKELPYEPSI 48
Query: 334 DKESRHRYIEAAKQHGVR 351
D E ++
Sbjct: 49 DVREFVTVEEIMREGYGP 66
Score = 26.5 bits (57), Expect = 5.4
Identities = 5/21 (23%), Positives = 14/21 (66%)
Query: 225 VLIMIGSQGSGKSSFVSTYLK 245
+++ +G+ GSGK++ + +
Sbjct: 2 IVVFVGTAGSGKTTLTGEFGR 22
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 169
Score = 26.8 bits (58), Expect = 3.6
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 226 LIMIGSQGSGKSSFVSTYLK 245
+++IG+ GK+SF+ Y
Sbjct: 8 ILIIGNSSVGKTSFLFRYAD 27
Score = 26.8 bits (58), Expect = 3.6
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 275 LIMIGSQGSGKSSFVSTYLK 294
+++IG+ GK+SF+ Y
Sbjct: 8 ILIIGNSSVGKTSFLFRYAD 27
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARL1 [TaxId: 9606]}
Length = 169
Score = 26.6 bits (57), Expect = 3.7
Identities = 5/27 (18%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Query: 220 HDKKQV-LIMIGSQGSGKSSFVSTYLK 245
H +++ ++++G G+GK++ +
Sbjct: 1 HMTREMRILILGLDGAGKTTILYRLQV 27
Score = 25.8 bits (55), Expect = 6.7
Identities = 4/20 (20%), Positives = 12/20 (60%)
Query: 275 LIMIGSQGSGKSSFVSTYLK 294
++++G G+GK++ +
Sbjct: 8 ILILGLDGAGKTTILYRLQV 27
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo
sapiens) [TaxId: 9606]}
Length = 172
Score = 26.6 bits (57), Expect = 3.7
Identities = 9/38 (23%), Positives = 18/38 (47%)
Query: 226 LIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTLGSWQKC 263
+++IG QG GKS+ + + + + + LG
Sbjct: 6 VVLIGEQGVGKSTLANIFAGVHDSMDSDCEVLGEDTYE 43
Score = 26.6 bits (57), Expect = 3.7
Identities = 9/38 (23%), Positives = 18/38 (47%)
Query: 275 LIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTLGSWQKC 312
+++IG QG GKS+ + + + + + LG
Sbjct: 6 VVLIGEQGVGKSTLANIFAGVHDSMDSDCEVLGEDTYE 43
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 166
Score = 26.7 bits (58), Expect = 3.7
Identities = 6/20 (30%), Positives = 13/20 (65%)
Query: 226 LIMIGSQGSGKSSFVSTYLK 245
+++IG G GKS + +++
Sbjct: 5 ILLIGDSGVGKSCLLVRFVE 24
Score = 26.7 bits (58), Expect = 3.7
Identities = 6/20 (30%), Positives = 13/20 (65%)
Query: 275 LIMIGSQGSGKSSFVSTYLK 294
+++IG G GKS + +++
Sbjct: 5 ILLIGDSGVGKSCLLVRFVE 24
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 166
Score = 26.6 bits (57), Expect = 3.9
Identities = 4/20 (20%), Positives = 10/20 (50%)
Query: 226 LIMIGSQGSGKSSFVSTYLK 245
L+ +G +GK++ +
Sbjct: 3 LLFLGLDNAGKTTLLHMLKN 22
Score = 26.6 bits (57), Expect = 3.9
Identities = 4/20 (20%), Positives = 10/20 (50%)
Query: 275 LIMIGSQGSGKSSFVSTYLK 294
L+ +G +GK++ +
Sbjct: 3 LLFLGLDNAGKTTLLHMLKN 22
>d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus
cereus [TaxId: 1396]}
Length = 257
Score = 27.1 bits (58), Expect = 3.9
Identities = 13/110 (11%), Positives = 31/110 (28%), Gaps = 8/110 (7%)
Query: 30 FDLDGTLITTKSGKVFPV-----DTHDWKLLFSNIESVLKQYLDDGYKLVIFTNQGAIGR 84
F GT + V + + D + + + A
Sbjct: 7 FAWAGTTVDYGCFAPLEVFMEIFHKRGVAITAEEARKPMGLLKIDHVRALTEMPRIASEW 66
Query: 85 KKMSTRDFQAKAEKIIKSLNVPVQMFVATQYDRYRKPVPGMWEYLSQEKN 134
++ + E I+ + + + RY P+ G+ E ++ +
Sbjct: 67 NRVFRQLPT---EADIQEMYEEFEEILFAILPRYASPINGVKEVIASLRE 113
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF1 [TaxId: 9606]}
Length = 160
Score = 26.5 bits (57), Expect = 4.0
Identities = 4/20 (20%), Positives = 11/20 (55%)
Query: 226 LIMIGSQGSGKSSFVSTYLK 245
++M+G +GK++ +
Sbjct: 3 ILMVGLDAAGKTTILYKLKL 22
Score = 26.5 bits (57), Expect = 4.0
Identities = 4/20 (20%), Positives = 11/20 (55%)
Query: 275 LIMIGSQGSGKSSFVSTYLK 294
++M+G +GK++ +
Sbjct: 3 ILMVGLDAAGKTTILYKLKL 22
>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal
recognition particle receptor FtsY {Escherichia coli
[TaxId: 562]}
Length = 211
Score = 26.6 bits (58), Expect = 4.0
Identities = 7/24 (29%), Positives = 14/24 (58%)
Query: 217 NIPHDKKQVLIMIGSQGSGKSSFV 240
N+ V++M+G G GK++ +
Sbjct: 3 NVEGKAPFVILMVGVNGVGKTTTI 26
>d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga
maritima [TaxId: 2336]}
Length = 267
Score = 26.9 bits (58), Expect = 4.1
Identities = 14/70 (20%), Positives = 29/70 (41%), Gaps = 18/70 (25%)
Query: 26 KIASFDLDGTLITTKSGKVFPVDTHDWKLLFSNIESVLKQYLDDGYKLVIFTNQGAIGRK 85
++ FDLDGTL+ + ++ + ++ + L +V + GR
Sbjct: 3 RVFVFDLDGTLL-----------NDNLEISEKDRRNI--EKLSRKCYVVFAS-----GRM 44
Query: 86 KMSTRDFQAK 95
+ST + + K
Sbjct: 45 LVSTLNVEKK 54
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 196
Score = 26.5 bits (57), Expect = 4.3
Identities = 9/42 (21%), Positives = 20/42 (47%)
Query: 216 PNIPHDKKQVLIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTL 257
P D+ V+ ++G G+GK + +K ++ ++ L
Sbjct: 1 PAFSPDQVSVIFVLGGPGAGKGTQCEKLVKDYSFVHLSAGDL 42
>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase
{Pseudomonas fragi [TaxId: 296]}
Length = 260
Score = 26.7 bits (58), Expect = 4.4
Identities = 12/48 (25%), Positives = 19/48 (39%)
Query: 317 KAALDSGLSVVVDNTNPDKESRHRYIEAAKQHGVRCIAVHMNISKEHA 364
A G +V++ E A QHGV+ + ++SK A
Sbjct: 22 TALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEA 69
>d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 243
Score = 26.5 bits (57), Expect = 4.4
Identities = 6/15 (40%), Positives = 9/15 (60%)
Query: 26 KIASFDLDGTLITTK 40
+ FD+DGTL +
Sbjct: 4 ALCLFDVDGTLTAPR 18
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId:
9606]}
Length = 170
Score = 26.4 bits (57), Expect = 4.6
Identities = 4/20 (20%), Positives = 11/20 (55%)
Query: 226 LIMIGSQGSGKSSFVSTYLK 245
++++G G GK+ + +
Sbjct: 9 VMLVGDSGVGKTCLLVRFKD 28
Score = 26.4 bits (57), Expect = 4.6
Identities = 4/20 (20%), Positives = 11/20 (55%)
Query: 275 LIMIGSQGSGKSSFVSTYLK 294
++++G G GK+ + +
Sbjct: 9 VMLVGDSGVGKTCLLVRFKD 28
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 26.4 bits (57), Expect = 4.6
Identities = 7/22 (31%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Query: 223 KQV-LIMIGSQGSGKSSFVSTY 243
+++ L+++G+ SGKS+F+
Sbjct: 1 RELKLLLLGTGESGKSTFIKQM 22
Score = 26.4 bits (57), Expect = 4.7
Identities = 7/18 (38%), Positives = 13/18 (72%)
Query: 275 LIMIGSQGSGKSSFVSTY 292
L+++G+ SGKS+F+
Sbjct: 5 LLLLGTGESGKSTFIKQM 22
>d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence
recognition protein Ffh {Thermus aquaticus [TaxId: 271]}
Length = 207
Score = 26.6 bits (58), Expect = 4.7
Identities = 8/25 (32%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Query: 217 NIPHDKKQ-VLIMIGSQGSGKSSFV 240
+P K + + ++G QGSGK++
Sbjct: 3 RLPVLKDRNLWFLVGLQGSGKTTTA 27
>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase
{Pseudomonas aeruginosa [TaxId: 287]}
Length = 162
Score = 26.4 bits (57), Expect = 4.8
Identities = 6/42 (14%), Positives = 18/42 (42%)
Query: 325 SVVVDNTNPDKESRHRYIEAAKQHGVRCIAVHMNISKEHAKH 366
++V++ + S + AA++ G+ + ++ A
Sbjct: 89 TLVLECSTIAPTSARKIHAAARERGLAMLDAPVSGGTAGAAA 130
>d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related
protein {Archaeon Thermoplasma acidophilum [TaxId:
2303]}
Length = 229
Score = 26.4 bits (57), Expect = 5.0
Identities = 9/48 (18%), Positives = 18/48 (37%), Gaps = 8/48 (16%)
Query: 30 FDLDGTLITTKSGKVFPVDTHDWKLLFSNIESVLKQYLDDGYKLVIFT 77
D DGTL+ + + + + S++ L + + I T
Sbjct: 5 LDYDGTLVP-------IIMNPEESYADAGLLSLISD-LKERFDTYIVT 44
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId:
562]}
Length = 171
Score = 26.1 bits (56), Expect = 5.0
Identities = 10/36 (27%), Positives = 18/36 (50%)
Query: 222 KKQVLIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTL 257
+ +++G GSGKS+ S L+ ++ D L
Sbjct: 5 DHHIYVLMGVSGSGKSAVASEVAHQLHAAFLDGDFL 40
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo
sapiens), ARL5A [TaxId: 9606]}
Length = 177
Score = 26.1 bits (56), Expect = 5.3
Identities = 8/48 (16%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
Query: 222 KKQV-LIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTLGSWQKCVSVMK 268
++ +I++G +GK++ + + N T+GS + + +
Sbjct: 13 HQEHKVIIVGLDNAGKTTILYQFSM--NEVVHTSPTIGSNVEEIVINN 58
Score = 25.7 bits (55), Expect = 7.3
Identities = 8/43 (18%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Query: 275 LIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTLGSWQKCVSVMK 317
+I++G +GK++ + + N T+GS + + +
Sbjct: 18 VIIVGLDNAGKTTILYQFSM--NEVVHTSPTIGSNVEEIVINN 58
>d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB {Methylobacterium
extorquens [TaxId: 408]}
Length = 323
Score = 26.4 bits (57), Expect = 5.4
Identities = 7/23 (30%), Positives = 12/23 (52%), Gaps = 1/23 (4%)
Query: 219 PHDKKQVLIMI-GSQGSGKSSFV 240
P + + + I G G GKS+ +
Sbjct: 46 PQTGRAIRVGITGVPGVGKSTTI 68
>d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 244
Score = 26.2 bits (56), Expect = 5.4
Identities = 8/52 (15%), Positives = 17/52 (32%), Gaps = 12/52 (23%)
Query: 26 KIASFDLDGTLITTKSGKVFPVDTHDWKLLFSNIESVLKQYLDDGYKLVIFT 77
+ FD+DGTL + + + + L++ V+
Sbjct: 2 VLCLFDVDGTLTP--ARQKIDPEVAAF----------LQKLRSRVQIGVVGG 41
>d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708
{Chlorobium tepidum [TaxId: 1097]}
Length = 228
Score = 26.3 bits (56), Expect = 5.4
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 24 SAKIASFDLDGTLITT 39
S + FD+DGTL+
Sbjct: 1 SRTLVLFDIDGTLLKV 16
>d1muka_ e.8.1.4 (A:) Reovirus polymerase lambda3 {Reovirus [TaxId:
10891]}
Length = 1264
Score = 26.9 bits (59), Expect = 5.7
Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 3/36 (8%)
Query: 193 PDFPNLPTFKPREVYQKAQSQTIPNIPHDKKQVLIM 228
PDF LP +++Q AQ + N+P V I+
Sbjct: 477 PDFKGLPVKAATKIFQAAQ---LANLPFSHTSVAIL 509
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL2 [TaxId: 10090]}
Length = 165
Score = 26.2 bits (56), Expect = 5.8
Identities = 5/20 (25%), Positives = 12/20 (60%)
Query: 226 LIMIGSQGSGKSSFVSTYLK 245
L+M+G +GK++ + +
Sbjct: 5 LLMLGLDNAGKTTILKKFNG 24
Score = 26.2 bits (56), Expect = 5.8
Identities = 5/20 (25%), Positives = 12/20 (60%)
Query: 275 LIMIGSQGSGKSSFVSTYLK 294
L+M+G +GK++ + +
Sbjct: 5 LLMLGLDNAGKTTILKKFNG 24
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit)
{Cow (Bos taurus) [TaxId: 9913]}
Length = 221
Score = 26.3 bits (57), Expect = 6.0
Identities = 7/24 (29%), Positives = 13/24 (54%)
Query: 220 HDKKQVLIMIGSQGSGKSSFVSTY 243
+ L+++G+ SGKS+ V
Sbjct: 3 YRATHRLLLLGAGESGKSTIVKQM 26
Score = 25.5 bits (55), Expect = 8.7
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 275 LIMIGSQGSGKSSFVSTY 292
L+++G+ SGKS+ V
Sbjct: 9 LLLLGAGESGKSTIVKQM 26
>d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790
{Agrobacterium tumefaciens [TaxId: 358]}
Length = 222
Score = 26.3 bits (56), Expect = 6.0
Identities = 5/10 (50%), Positives = 7/10 (70%)
Query: 30 FDLDGTLITT 39
FD DG L+ +
Sbjct: 7 FDCDGVLVDS 16
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta,
toxin zeta subunit {Streptococcus pyogenes [TaxId:
1314]}
Length = 273
Score = 26.5 bits (57), Expect = 6.0
Identities = 20/136 (14%), Positives = 40/136 (29%), Gaps = 7/136 (5%)
Query: 204 REVYQKAQSQTIPNIPHDKKQVLIMIGSQGSGKSSFVSTYLKPL--NYTTVNRDTL-GSW 260
+ + Q + P ++ G GSGK+S S + N ++ DT
Sbjct: 17 DNLEELIQGKKAVESPT----AFLLGGQPGSGKTSLRSAIFEETQGNVIVIDNDTFKQQH 72
Query: 261 QKCVSVMKAALDSVLIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTLGSWQKCVSVMKAAL 320
++K V+ + + + + + L Y V T + +
Sbjct: 73 PNFDELVKLYEKDVVKHVTPYSNRMTEAIISRLSDQGYNLVIEGTGRTTDVPIQTATMLQ 132
Query: 321 DSGLSVVVDNTNPDKE 336
G + K
Sbjct: 133 AKGYETKMYVMAVPKI 148
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos
taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Length = 189
Score = 26.0 bits (56), Expect = 6.3
Identities = 13/99 (13%), Positives = 24/99 (24%), Gaps = 5/99 (5%)
Query: 275 LIMIGSQGSGKSSFVSTYLKPLNYTTVNRDTLGSWQKCVSVM-----KAALDSGLSVVVD 329
++G+ GSGK + S K ++ L K +D G + D
Sbjct: 9 AAIMGAPGSGKGTVSSRITKHFELKHLSSGDLLRDNMLRGTEIGVLAKTFIDQGKLIPDD 68
Query: 330 NTNPDKESRHRYIEAAKQHGVRCIAVHMNISKEHAKHNI 368
+ + + I
Sbjct: 69 VMTRLVLHELKNLTQYNWLLDGFPRTLPQAEALDRAYQI 107
>d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase
{Pyrococcus horikoshii [TaxId: 53953]}
Length = 230
Score = 26.1 bits (56), Expect = 6.3
Identities = 10/67 (14%), Positives = 21/67 (31%), Gaps = 17/67 (25%)
Query: 26 KIASFDLDGTLITTKSGKVFPVDTHDWKLLFSNIESVLKQYLDDGYKLVIFTNQGAIGRK 85
K S D+DGT+ + + +E +++ G +++ T G
Sbjct: 3 KAISIDIDGTIT-----------YPNRMIHEKALE-AIRRAESLGIPIMLVT-----GNT 45
Query: 86 KMSTRDF 92
Sbjct: 46 VQFAEAA 52
>d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD
{Xanthobacter autotrophicus [TaxId: 280]}
Length = 245
Score = 26.3 bits (56), Expect = 6.5
Identities = 6/12 (50%), Positives = 7/12 (58%)
Query: 30 FDLDGTLITTKS 41
FD GTL +S
Sbjct: 7 FDAYGTLFDVQS 18
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo
sapiens), ARL8A [TaxId: 9606]}
Length = 164
Score = 25.8 bits (55), Expect = 6.6
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 226 LIMIGSQGSGKSSFVSTYLK 245
L ++G Q SGK++FV+
Sbjct: 5 LTLVGLQYSGKTTFVNVIAS 24
Score = 25.8 bits (55), Expect = 6.6
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 275 LIMIGSQGSGKSSFVSTYLK 294
L ++G Q SGK++FV+
Sbjct: 5 LTLVGLQYSGKTTFVNVIAS 24
>d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph
{Haemophilus somnus [TaxId: 731]}
Length = 224
Score = 26.0 bits (55), Expect = 6.9
Identities = 8/14 (57%), Positives = 11/14 (78%)
Query: 26 KIASFDLDGTLITT 39
K+ FDLDGTL+ +
Sbjct: 5 KLIGFDLDGTLVNS 18
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL3 [TaxId: 10090]}
Length = 176
Score = 25.7 bits (55), Expect = 6.9
Identities = 4/25 (16%), Positives = 14/25 (56%)
Query: 221 DKKQVLIMIGSQGSGKSSFVSTYLK 245
D++ ++++G +GK++ +
Sbjct: 14 DQEVRILLLGLDNAGKTTLLKQLAS 38
Score = 25.3 bits (54), Expect = 9.1
Identities = 3/20 (15%), Positives = 11/20 (55%)
Query: 275 LIMIGSQGSGKSSFVSTYLK 294
++++G +GK++ +
Sbjct: 19 ILLLGLDNAGKTTLLKQLAS 38
>d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 247
Score = 26.0 bits (55), Expect = 7.1
Identities = 12/108 (11%), Positives = 25/108 (23%), Gaps = 8/108 (7%)
Query: 30 FDLDGTLI-TTKSGKVFPVDTHDWKLLFSNIESVLKQYLDDGYKLVIFTNQGAIGRKKMS 88
FDLD TLI T + + ++ + + + D +
Sbjct: 11 FDLDNTLIDTAGASRRGMLEVIKLLQSKYHYKEEAEIICDKVQVKLSKECFHPYSTCITD 70
Query: 89 TRDFQAKAEKIIKSLNVPVQMFVATQYDRYR-------KPVPGMWEYL 129
R + + Y ++ + L
Sbjct: 71 VRTSHWEEAIQETKGGADNRKLAEECYFLWKSTRLQHMILADDVKAML 118
>d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId:
562]}
Length = 218
Score = 25.9 bits (55), Expect = 7.1
Identities = 6/10 (60%), Positives = 8/10 (80%)
Query: 30 FDLDGTLITT 39
FD+DG LI +
Sbjct: 8 FDMDGLLIDS 17
>d1u0la2 c.37.1.8 (A:69-293) Probable GTPase EngC (YjeQ), C-terminal
domain {Thermotoga maritima [TaxId: 2336]}
Length = 225
Score = 25.8 bits (56), Expect = 7.1
Identities = 9/30 (30%), Positives = 13/30 (43%)
Query: 222 KKQVLIMIGSQGSGKSSFVSTYLKPLNYTT 251
K ++ M G G GKSS ++ L
Sbjct: 94 KGKISTMAGLSGVGKSSLLNAINPGLKLRV 123
>d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon
Pyrococcus horikoshii [TaxId: 53953]}
Length = 230
Score = 26.0 bits (55), Expect = 7.4
Identities = 5/12 (41%), Positives = 8/12 (66%)
Query: 30 FDLDGTLITTKS 41
FD GTL++ +
Sbjct: 7 FDFVGTLLSVEG 18
>d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase
{Lactobacillus plantarum [TaxId: 1590]}
Length = 207
Score = 26.0 bits (55), Expect = 7.6
Identities = 6/10 (60%), Positives = 8/10 (80%)
Query: 30 FDLDGTLITT 39
FD+DGTL +
Sbjct: 8 FDIDGTLTNS 17
>d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate
phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]}
Length = 232
Score = 25.8 bits (55), Expect = 7.7
Identities = 7/48 (14%), Positives = 14/48 (29%), Gaps = 12/48 (25%)
Query: 30 FDLDGTLITTKSGKVFPVDTHDWKLLFSNIESVLKQYLDDGYKLVIFT 77
DLDGTL+ L + + +++ +
Sbjct: 9 SDLDGTLL-----------DSHSYDWQPAAP-WLTRLREANVPVILCS 44
>d1v5ma_ b.55.1.1 (A:) SH2 and PH domain-containing adapter protein
APS {Mouse (Mus musculus) [TaxId: 10090]}
Length = 136
Score = 25.2 bits (54), Expect = 7.8
Identities = 15/97 (15%), Positives = 25/97 (25%), Gaps = 11/97 (11%)
Query: 279 GSQGSGKSSFVSTYL-----------KPLNYTTVNRDTLGSWQKCVSVMKAALDSGLSVV 327
GS GS + L + WQKC +++ A+ +
Sbjct: 1 GSSGSSGNLAAKVELVDIQREGALRFMVADDAASGPGGTAQWQKCRLLLRRAVAGERFRL 60
Query: 328 VDNTNPDKESRHRYIEAAKQHGVRCIAVHMNISKEHA 364
P I + VR K++
Sbjct: 61 EFFVPPKASRPKVSIPLSAIIEVRTTMPLEMPEKDNT 97
>d2ctfa1 d.51.1.1 (A:7-96) Vigilin {Human (Homo sapiens) [TaxId:
9606]}
Length = 90
Score = 24.8 bits (54), Expect = 7.8
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 204 REVYQKAQSQTIPNIPHDKKQVLIMIGSQGS 234
EVY KA S T+ ++ +IG +G
Sbjct: 11 TEVYAKANSFTVSSVAAPSWLHRFIIGKKGQ 41
>d2akab1 c.37.1.8 (B:6-304) Dynamin G domain {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 299
Score = 26.0 bits (56), Expect = 8.6
Identities = 6/15 (40%), Positives = 11/15 (73%)
Query: 226 LIMIGSQGSGKSSFV 240
+ ++G Q +GKSS +
Sbjct: 29 IAVVGGQSAGKSSVL 43
Score = 26.0 bits (56), Expect = 8.6
Identities = 6/15 (40%), Positives = 11/15 (73%)
Query: 275 LIMIGSQGSGKSSFV 289
+ ++G Q +GKSS +
Sbjct: 29 IAVVGGQSAGKSSVL 43
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 25.6 bits (55), Expect = 8.7
Identities = 6/18 (33%), Positives = 13/18 (72%)
Query: 226 LIMIGSQGSGKSSFVSTY 243
++++G+ SGKS+F+
Sbjct: 5 ILLLGAGESGKSTFLKQM 22
Score = 25.6 bits (55), Expect = 8.7
Identities = 6/18 (33%), Positives = 13/18 (72%)
Query: 275 LIMIGSQGSGKSSFVSTY 292
++++G+ SGKS+F+
Sbjct: 5 ILLLGAGESGKSTFLKQM 22
>d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064
{Streptococcus pneumoniae [TaxId: 1313]}
Length = 204
Score = 25.5 bits (54), Expect = 8.7
Identities = 6/10 (60%), Positives = 9/10 (90%)
Query: 30 FDLDGTLITT 39
+DLDGTL+ +
Sbjct: 6 WDLDGTLLDS 15
>d1w0pa2 b.29.1.8 (A:347-543) Vibrio cholerae sialidase, N-terminal
and insertion domains {Vibrio cholerae [TaxId: 666]}
Length = 197
Score = 25.7 bits (56), Expect = 8.8
Identities = 12/57 (21%), Positives = 23/57 (40%), Gaps = 6/57 (10%)
Query: 24 SAKIASFDLDGTLITTKSGKVFPVDTHDWKLLFSNIESVLKQYLDDGYKLVIFTNQG 80
+ +DG ITT +G+V + + + I+ L + ++ T QG
Sbjct: 104 LNHTTTLFVDGQQITTWAGEVSQENNIQFGNADAQIDGRL------HVQKIVLTQQG 154
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 195
Score = 25.7 bits (55), Expect = 9.1
Identities = 8/22 (36%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
Query: 223 KQV-LIMIGSQGSGKSSFVSTY 243
++V L+++G+ SGKS+ V
Sbjct: 1 REVKLLLLGAGESGKSTIVKQM 22
Score = 25.7 bits (55), Expect = 9.2
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 275 LIMIGSQGSGKSSFVSTY 292
L+++G+ SGKS+ V
Sbjct: 5 LLLLGAGESGKSTIVKQM 22
>d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104
{Streptococcus pneumoniae [TaxId: 1313]}
Length = 210
Score = 25.6 bits (54), Expect = 9.1
Identities = 7/10 (70%), Positives = 9/10 (90%)
Query: 30 FDLDGTLITT 39
FDLDGTL+ +
Sbjct: 9 FDLDGTLVDS 18
>d1pq4a_ c.92.2.2 (A:) Periplasmic zinc binding protein ZnuA
{Synechocystis sp. pcc 6803 [TaxId: 1148]}
Length = 289
Score = 25.7 bits (55), Expect = 9.4
Identities = 6/40 (15%), Positives = 18/40 (45%)
Query: 326 VVVDNTNPDKESRHRYIEAAKQHGVRCIAVHMNISKEHAK 365
+ V+ P + + I+ AK++ + + S + ++
Sbjct: 214 IEVEGQEPSAQELKQLIDTAKENNLTMVFGETQFSTKSSE 253
>d1jwyb_ c.37.1.8 (B:) Dynamin G domain {Dictyostelium discoideum
[TaxId: 44689]}
Length = 306
Score = 25.9 bits (56), Expect = 9.4
Identities = 8/15 (53%), Positives = 13/15 (86%)
Query: 226 LIMIGSQGSGKSSFV 240
++++GSQ SGKSS +
Sbjct: 27 IVVVGSQSSGKSSVL 41
Score = 25.9 bits (56), Expect = 9.4
Identities = 8/15 (53%), Positives = 13/15 (86%)
Query: 275 LIMIGSQGSGKSSFV 289
++++GSQ SGKSS +
Sbjct: 27 IVVVGSQSSGKSSVL 41
>d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD
{Pseudomonas sp., strain YL [TaxId: 306]}
Length = 220
Score = 25.6 bits (54), Expect = 9.5
Identities = 7/12 (58%), Positives = 7/12 (58%)
Query: 30 FDLDGTLITTKS 41
FDL GTL S
Sbjct: 7 FDLYGTLFDVHS 18
>d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId:
9823]}
Length = 194
Score = 25.3 bits (54), Expect = 9.9
Identities = 6/16 (37%), Positives = 11/16 (68%)
Query: 222 KKQVLIMIGSQGSGKS 237
K +++ ++G GSGK
Sbjct: 7 KSKIIFVVGGPGSGKG 22
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.318 0.132 0.392
Gapped
Lambda K H
0.267 0.0467 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,345,060
Number of extensions: 61566
Number of successful extensions: 645
Number of sequences better than 10.0: 1
Number of HSP's gapped: 629
Number of HSP's successfully gapped: 204
Length of query: 369
Length of database: 2,407,596
Length adjustment: 87
Effective length of query: 282
Effective length of database: 1,213,086
Effective search space: 342090252
Effective search space used: 342090252
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.2 bits)