BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4599
(201 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|121543875|gb|ABM55602.1| putative signal sequence receptor beta subunit [Maconellicoccus
hirsutus]
Length = 196
Score = 139 bits (350), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 82/201 (40%), Positives = 112/201 (55%), Gaps = 49/201 (24%)
Query: 1 MDVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQP 60
MD+V+KYTIYN+GN A VV++D SFP +AF + GGQ IDR+PPQTNV+H V+V+P
Sbjct: 45 MDIVIKYTIYNVGNGPAQEVVINDESFPADAFVVAGGQLNVRIDRIPPQTNVSHTVVVRP 104
Query: 61 KSYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVI 120
K++G+FNFS A V YKASE+ AT + + SS P E I F+
Sbjct: 105 KTFGSFNFSSAYVQYKASES-------------ATELQSAVSSEPGEGRII---NFRDYD 148
Query: 121 DRVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLIPFLL 180
+ P HV+ DWAAFA MT+P +++PF+L
Sbjct: 149 KKFSP-----HVL----------------------------DWAAFAIMTMPSIIVPFIL 175
Query: 181 WFQSKTKYEKLAGGKTKKSKD 201
++ SKTKYE +A K +K +D
Sbjct: 176 FWSSKTKYEAIAKQKREKKQD 196
>gi|312373721|gb|EFR21414.1| hypothetical protein AND_17079 [Anopheles darlingi]
Length = 193
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/197 (41%), Positives = 105/197 (53%), Gaps = 50/197 (25%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 61
DVVVKYT+YN+G+ A NV + D+ F PE FE+ GGQ IDR+ PQTNVTH+V+V+PK
Sbjct: 45 DVVVKYTLYNVGSGPAVNVRLVDNGFHPEVFEVVGGQLSATIDRIAPQTNVTHIVVVRPK 104
Query: 62 SYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVID 121
+YG NF+ AEV+YKA+E+A + S SS P E
Sbjct: 105 TYGYLNFTAAEVNYKATEDASEEQF-------------SISSEPGE-------------- 137
Query: 122 RVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLIPFLLW 181
GA AEV + ++ DW AFAF+TLP L IP+ +W
Sbjct: 138 -------------------GAI---VAEVQFNKQFSSHYLDWLAFAFLTLPSLAIPYAMW 175
Query: 182 FQSKTKYEKLAGGKTKK 198
+ SKTKYE L G TKK
Sbjct: 176 YSSKTKYE-LLGKPTKK 191
>gi|389608539|dbj|BAM17879.1| signal sequence receptor beta [Papilio xuthus]
Length = 190
Score = 133 bits (334), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 78/195 (40%), Positives = 106/195 (54%), Gaps = 49/195 (25%)
Query: 1 MDVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQP 60
MD++VKYT+YN+G + A +V + D+ F P+ FE+ GGQ IDR+PPQTNV+HVV V+
Sbjct: 42 MDILVKYTLYNVGTAPAVDVKLVDNGFHPDVFEVVGGQLTAEIDRIPPQTNVSHVVTVRS 101
Query: 61 KSYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVI 120
+G FNF+ AEV+Y+ASE++ D Y+I +S +V AF+ +F
Sbjct: 102 NRFGYFNFTAAEVTYRASEDSTDVQ-YSISSSPGEGAIV--------AFKDYDRKFS--- 149
Query: 121 DRVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLIPFLL 180
+H++ DWAAFA MTLP L IPF L
Sbjct: 150 ---------SHIL----------------------------DWAAFAVMTLPSLAIPFGL 172
Query: 181 WFQSKTKYEKLAGGK 195
WF SK+KYEKLA K
Sbjct: 173 WFSSKSKYEKLAKPK 187
>gi|389611275|dbj|BAM19249.1| signal sequence receptor beta [Papilio polytes]
Length = 190
Score = 132 bits (332), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 79/195 (40%), Positives = 104/195 (53%), Gaps = 49/195 (25%)
Query: 1 MDVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQP 60
MDV+VKYT+YN+G + A V + D+ F P+ FE+ GGQ IDR+PPQTNV+HVV V+
Sbjct: 42 MDVLVKYTLYNVGTAPAVEVKLIDTGFHPDVFEVVGGQLTAEIDRIPPQTNVSHVVTVRS 101
Query: 61 KSYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVI 120
+G FNF+ AEV+Y+ASE + D Y+I +S +V AF+ +F
Sbjct: 102 TRFGYFNFTAAEVTYRASEESTDVQ-YSISSSPGEGAIV--------AFKDYDRKFS--- 149
Query: 121 DRVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLIPFLL 180
+H++ DWAAFA MTLP L IPF L
Sbjct: 150 ---------SHIL----------------------------DWAAFAVMTLPSLAIPFGL 172
Query: 181 WFQSKTKYEKLAGGK 195
WF SK+KYEKLA K
Sbjct: 173 WFSSKSKYEKLAKPK 187
>gi|194749617|ref|XP_001957235.1| GF24158 [Drosophila ananassae]
gi|190624517|gb|EDV40041.1| GF24158 [Drosophila ananassae]
Length = 190
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/143 (50%), Positives = 86/143 (60%), Gaps = 30/143 (20%)
Query: 84 YTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAF 143
YTI+N+GN AT V + DS F PEAFE+ GGQ V+DR+ PQTN THVV+V+PK++G F
Sbjct: 49 YTIFNVGNGAATKVSLVDSGFHPEAFEVVGGQPTAVVDRIAPQTNFTHVVVVRPKAFGYF 108
Query: 144 NFSFAEVSYKASENAE-----------DG-----------------DWAAFAFMTLPPLL 175
NF+ AEVSYK E AE +G DW AFA MTLP L
Sbjct: 109 NFTAAEVSYKPVEEAETLQLAISSEPGEGGIVNLNEYNKRFSSHFFDWVAFAVMTLPSLA 168
Query: 176 IPFLLWFQSKTKYEKLAGGKTKK 198
IP LW QSK+KYE+ GK KK
Sbjct: 169 IPLGLWHQSKSKYER--SGKNKK 189
>gi|242015836|ref|XP_002428553.1| translocon-associated protein subunit beta precursor, putative
[Pediculus humanus corporis]
gi|212513187|gb|EEB15815.1| translocon-associated protein subunit beta precursor, putative
[Pediculus humanus corporis]
Length = 188
Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 64/136 (47%), Positives = 83/136 (61%), Gaps = 27/136 (19%)
Query: 84 YTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAF 143
YT+YN+G + A NVV+SD SF PE+F + GGQ IDR+PP TN THV +++ YG +
Sbjct: 49 YTLYNVGKNAAINVVLSDQSFHPESFVLMGGQLSVKIDRIPPGTNATHVAVIRSTKYGYY 108
Query: 144 NFSFAEVSYKASE--------NAEDG-------------------DWAAFAFMTLPPLLI 176
NF+ AEVSYK SE +E G DW AFA MTLP L+I
Sbjct: 109 NFTAAEVSYKVSEEGALQYAVTSEPGEGLIVAFRDYDKKFSSHVLDWIAFAIMTLPSLVI 168
Query: 177 PFLLWFQSKTKYEKLA 192
PF+LW+ SK+KYE+L+
Sbjct: 169 PFVLWYSSKSKYEQLS 184
>gi|125976998|ref|XP_001352532.1| GA18908 [Drosophila pseudoobscura pseudoobscura]
gi|54641279|gb|EAL30029.1| GA18908 [Drosophila pseudoobscura pseudoobscura]
Length = 190
Score = 129 bits (325), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 70/143 (48%), Positives = 86/143 (60%), Gaps = 30/143 (20%)
Query: 84 YTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAF 143
YTI+N+GN ATNV + D+ F PEAFE+ GGQ ++R+ PQTN THVV+V+PK++G F
Sbjct: 49 YTIFNVGNGAATNVALVDNGFHPEAFEVVGGQPTATVERIAPQTNFTHVVVVRPKAFGYF 108
Query: 144 NFSFAEVSYKASENAE-----------DG-----------------DWAAFAFMTLPPLL 175
NF+ AEVSYK E AE +G DW AFA MTLP L
Sbjct: 109 NFTAAEVSYKPVEEAEALQLAISSEPGEGGIVNLNEYNKRFSSHFFDWVAFAVMTLPSLA 168
Query: 176 IPFLLWFQSKTKYEKLAGGKTKK 198
IP LW QSK+KYE+ GK KK
Sbjct: 169 IPLGLWHQSKSKYER--AGKNKK 189
>gi|195168305|ref|XP_002024972.1| GL17832 [Drosophila persimilis]
gi|194108402|gb|EDW30445.1| GL17832 [Drosophila persimilis]
Length = 190
Score = 129 bits (325), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 70/143 (48%), Positives = 86/143 (60%), Gaps = 30/143 (20%)
Query: 84 YTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAF 143
YTI+N+GN ATNV + D+ F PEAFE+ GGQ ++R+ PQTN THVV+V+PK++G F
Sbjct: 49 YTIFNVGNGAATNVALVDNGFHPEAFEVVGGQPTATVERIAPQTNFTHVVVVRPKAFGYF 108
Query: 144 NFSFAEVSYKASENAE-----------DG-----------------DWAAFAFMTLPPLL 175
NF+ AEVSYK E AE +G DW AFA MTLP L
Sbjct: 109 NFTAAEVSYKPVEEAEALQLAISSEPGEGGIVNLNEYNKRFSSHFFDWVAFAVMTLPSLA 168
Query: 176 IPFLLWFQSKTKYEKLAGGKTKK 198
IP LW QSK+KYE+ GK KK
Sbjct: 169 IPLGLWHQSKSKYER--AGKNKK 189
>gi|170038790|ref|XP_001847231.1| translocon-associated protein subunit beta [Culex quinquefasciatus]
gi|167882477|gb|EDS45860.1| translocon-associated protein subunit beta [Culex quinquefasciatus]
Length = 194
Score = 129 bits (324), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 77/198 (38%), Positives = 101/198 (51%), Gaps = 49/198 (24%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 61
D+VVKYT+YN+G ATNV + D+ F PEAF + GGQ IDR+ PQTNVTH+ +V+PK
Sbjct: 45 DIVVKYTVYNVGTGAATNVQLVDNGFHPEAFTVVGGQLTATIDRIAPQTNVTHIAVVRPK 104
Query: 62 SYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVID 121
++G FNF+ AEV+Y+ +E AT + + SS P E + QF
Sbjct: 105 AFGYFNFTAAEVNYQPTEE-------------ATVLQFAVSSEPGEGAIVAEAQFN---- 147
Query: 122 RVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLIPFLLW 181
K + + DW AFA MTLP L IP+ LW
Sbjct: 148 ----------------KQFSSHYL----------------DWFAFAIMTLPSLAIPYALW 175
Query: 182 FQSKTKYEKLAGGKTKKS 199
+ SKTKYE LA KK+
Sbjct: 176 YSSKTKYELLAKPAAKKA 193
>gi|225710348|gb|ACO11020.1| Translocon-associated protein subunit beta precursor [Caligus
rogercresseyi]
Length = 199
Score = 129 bits (324), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 104/197 (52%), Gaps = 48/197 (24%)
Query: 1 MDVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQP 60
MD+VVKY IYNIG+ A +V VS+ FP ++F++ GQ F +DR+PP +N TH ++V+P
Sbjct: 50 MDIVVKYGIYNIGDLPAVDVSVSEMGFPDDSFDVASGQTSFKLDRIPPHSNNTHALVVRP 109
Query: 61 KSYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVI 120
K +G FNF+ AEV Y+ SE A+D I +G S
Sbjct: 110 KKFGYFNFTSAEVKYRVSEEADD--IVQVGLS---------------------------- 139
Query: 121 DRVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLIPFLL 180
++ H VI+ K+Y FS A DW AFA +TLPPL +PF+L
Sbjct: 140 ------SDPGHGVIISLKNYDK-QFS-----------AHILDWIAFAVITLPPLAVPFML 181
Query: 181 WFQSKTKYEKLAGGKTK 197
W+ SK+KYE + G K
Sbjct: 182 WYSSKSKYESIMKGSKK 198
>gi|289740131|gb|ADD18813.1| translocon-associated complex TRAP beta subunit [Glossina morsitans
morsitans]
Length = 190
Score = 129 bits (324), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 76/197 (38%), Positives = 102/197 (51%), Gaps = 51/197 (25%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 61
D++V+YTIYN+GN ATNV + D+ F PEAFEI GGQ I+R+ PQ N THV++V+PK
Sbjct: 44 DLLVRYTIYNVGNGAATNVKLVDNGFHPEAFEIVGGQPMATIERIAPQANYTHVLVVRPK 103
Query: 62 SYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVID 121
SYG FNF+ AE++YK E AE + + I
Sbjct: 104 SYGYFNFTAAEITYKPIEEAE--------------------------------KLQLTIS 131
Query: 122 RVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLIPFLLW 181
P + + ++ G FN F+ + DW AFA M+LP L+IP LW
Sbjct: 132 SEPGEGGIVNL--------GEFNKRFSSHFF---------DWFAFAIMSLPSLVIPLALW 174
Query: 182 FQSKTKYEKLAGGKTKK 198
SK+KYE+ GK KK
Sbjct: 175 HSSKSKYERY--GKNKK 189
>gi|195428006|ref|XP_002062066.1| GK16852 [Drosophila willistoni]
gi|194158151|gb|EDW73052.1| GK16852 [Drosophila willistoni]
Length = 190
Score = 129 bits (323), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 69/143 (48%), Positives = 86/143 (60%), Gaps = 30/143 (20%)
Query: 84 YTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAF 143
YTI+N+GN ATNV + D+ F P+AFE+ GGQ +DR+ PQTN THVV+V+PK++G +
Sbjct: 49 YTIFNVGNGAATNVQLVDNGFHPDAFEVVGGQPAATVDRIAPQTNFTHVVVVRPKAFGYY 108
Query: 144 NFSFAEVSYKASENAE-----------DG-----------------DWAAFAFMTLPPLL 175
NF+ AEVSYK E AE +G DW AFA MTLP L
Sbjct: 109 NFTAAEVSYKPVEEAETVQLAISSEPGEGGIVNLNEYNKRFSSHFFDWVAFAIMTLPSLA 168
Query: 176 IPFLLWFQSKTKYEKLAGGKTKK 198
IP LW QSK+KYE+ GK KK
Sbjct: 169 IPLALWHQSKSKYER--SGKNKK 189
>gi|24665049|ref|NP_524103.2| signal sequence receptor beta [Drosophila melanogaster]
gi|5679114|gb|AAD46863.1|AF160923_1 BcDNA.LD10457 [Drosophila melanogaster]
gi|23093371|gb|AAF49532.2| signal sequence receptor beta [Drosophila melanogaster]
gi|220952886|gb|ACL88986.1| SsRbeta-PA [synthetic construct]
Length = 190
Score = 129 bits (323), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 69/143 (48%), Positives = 87/143 (60%), Gaps = 30/143 (20%)
Query: 84 YTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAF 143
YTI+N+G+ AT V + DS F PEAF++ GGQ V+DR+ PQTN THV++V+PK++G F
Sbjct: 49 YTIFNVGSGAATKVRLVDSGFHPEAFDVVGGQPTAVVDRIAPQTNFTHVLVVRPKAFGYF 108
Query: 144 NFSFAEVSYKASENAE-----------DG-----------------DWAAFAFMTLPPLL 175
NF+ AEVSYKA E +E +G DW AFA MTLP L
Sbjct: 109 NFTAAEVSYKAVEESETLQLAVSSEPGEGGIVNLNEYNKRFSSHFFDWVAFAVMTLPSLA 168
Query: 176 IPFLLWFQSKTKYEKLAGGKTKK 198
IP LW QSK+KYE+ GK KK
Sbjct: 169 IPLALWHQSKSKYER--SGKNKK 189
>gi|307209959|gb|EFN86736.1| Translocon-associated protein subunit beta [Harpegnathos saltator]
Length = 197
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/197 (41%), Positives = 104/197 (52%), Gaps = 42/197 (21%)
Query: 1 MDVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQP 60
MD+V+KYTIYNIGN A V ++D+SF P+ F G+ IDRVPP TNV+H V+V+P
Sbjct: 42 MDIVIKYTIYNIGNVAAFEVEITDNSFHPDHFTHVSGEVNARIDRVPPYTNVSHTVVVRP 101
Query: 61 KSYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVI 120
+ +G FNF+ AEV Y+ E+A + V+ SS P E
Sbjct: 102 RKFGFFNFTSAEVLYRRKEDAP-------------RLQVAVSSEPGEG------------ 136
Query: 121 DRVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLIPFLL 180
+IV + Y FS + VSY A DWAAFA MTLPPL IPF L
Sbjct: 137 ------------LIVAYRDYDK-QFS-SHVSYHV---ALQIDWAAFAVMTLPPLAIPFAL 179
Query: 181 WFQSKTKYEKLAGGKTK 197
W+ SK+KYEKL K
Sbjct: 180 WYSSKSKYEKLLKNTKK 196
>gi|195478699|ref|XP_002086518.1| signal sequence receptor beta [Drosophila yakuba]
gi|195496618|ref|XP_002095769.1| GE19524 [Drosophila yakuba]
gi|194181870|gb|EDW95481.1| GE19524 [Drosophila yakuba]
gi|194186308|gb|EDW99919.1| signal sequence receptor beta [Drosophila yakuba]
Length = 190
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/143 (48%), Positives = 87/143 (60%), Gaps = 30/143 (20%)
Query: 84 YTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAF 143
YTI+N+G+ AT V + DS F PEAF++ GGQ V+DR+ PQTN THV++V+PK++G F
Sbjct: 49 YTIFNVGSGAATKVRLVDSGFHPEAFDVVGGQPTAVVDRIAPQTNFTHVLVVRPKAFGYF 108
Query: 144 NFSFAEVSYKASENAE-----------DG-----------------DWAAFAFMTLPPLL 175
NF+ AEVSYKA E +E +G DW AFA MTLP L
Sbjct: 109 NFTAAEVSYKAVEESETLQLAISSEPGEGGIVNLNEYNKRFSSHFFDWVAFAVMTLPSLA 168
Query: 176 IPFLLWFQSKTKYEKLAGGKTKK 198
IP LW QSK+KYE+ GK KK
Sbjct: 169 IPLGLWHQSKSKYER--SGKNKK 189
>gi|195327975|ref|XP_002030692.1| GM25590 [Drosophila sechellia]
gi|195590653|ref|XP_002085059.1| GD14599 [Drosophila simulans]
gi|194119635|gb|EDW41678.1| GM25590 [Drosophila sechellia]
gi|194197068|gb|EDX10644.1| GD14599 [Drosophila simulans]
Length = 190
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/143 (48%), Positives = 87/143 (60%), Gaps = 30/143 (20%)
Query: 84 YTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAF 143
YTI+N+G+ AT V + DS F PEAF++ GGQ V+DR+ PQTN THV++V+PK++G F
Sbjct: 49 YTIFNVGSGAATKVRLVDSGFHPEAFDVVGGQPTAVVDRIAPQTNFTHVLVVRPKAFGYF 108
Query: 144 NFSFAEVSYKASENAE-----------DG-----------------DWAAFAFMTLPPLL 175
NF+ AEVSYKA E +E +G DW AFA MTLP L
Sbjct: 109 NFTAAEVSYKAVEESETLQLAVSSEPGEGGIVNLNEYNKRFSSHFFDWVAFAVMTLPSLA 168
Query: 176 IPFLLWFQSKTKYEKLAGGKTKK 198
IP LW QSK+KYE+ GK KK
Sbjct: 169 IPLGLWHQSKSKYER--SGKNKK 189
>gi|194873313|ref|XP_001973182.1| GG15954 [Drosophila erecta]
gi|190654965|gb|EDV52208.1| GG15954 [Drosophila erecta]
Length = 190
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/143 (48%), Positives = 87/143 (60%), Gaps = 30/143 (20%)
Query: 84 YTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAF 143
YTI+N+G+ AT V + DS F PEAF++ GGQ V+DR+ PQTN THV++V+PK++G F
Sbjct: 49 YTIFNVGSGAATKVRLVDSGFHPEAFDVVGGQPTAVVDRIAPQTNFTHVLVVRPKAFGYF 108
Query: 144 NFSFAEVSYKASENAE-----------DG-----------------DWAAFAFMTLPPLL 175
NF+ AEVSYKA E +E +G DW AFA MTLP L
Sbjct: 109 NFTAAEVSYKAVEESETLQLAVSSEPGEGGIVNLNEYNKRFSSHFFDWVAFAVMTLPSLA 168
Query: 176 IPFLLWFQSKTKYEKLAGGKTKK 198
IP LW QSK+KYE+ GK KK
Sbjct: 169 IPLGLWHQSKSKYER--SGKNKK 189
>gi|38047895|gb|AAR09850.1| similar to Drosophila melanogaster SsRbeta, partial [Drosophila
yakuba]
Length = 194
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/143 (48%), Positives = 87/143 (60%), Gaps = 30/143 (20%)
Query: 84 YTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAF 143
YTI+N+G+ AT V + DS F PEAF++ GGQ V+DR+ PQTN THV++V+PK++G F
Sbjct: 53 YTIFNVGSGAATKVRLVDSGFHPEAFDVVGGQPTAVVDRIAPQTNFTHVLVVRPKAFGYF 112
Query: 144 NFSFAEVSYKASENAE-----------DG-----------------DWAAFAFMTLPPLL 175
NF+ AEVSYKA E +E +G DW AFA MTLP L
Sbjct: 113 NFTAAEVSYKAVEESETLQLAISSEPGEGGIVNLNEYNKRFSSHFFDWVAFAVMTLPSLA 172
Query: 176 IPFLLWFQSKTKYEKLAGGKTKK 198
IP LW QSK+KYE+ GK KK
Sbjct: 173 IPLGLWHQSKSKYER--SGKNKK 193
>gi|195375497|ref|XP_002046537.1| GJ12435 [Drosophila virilis]
gi|194153695|gb|EDW68879.1| GJ12435 [Drosophila virilis]
Length = 190
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/197 (40%), Positives = 104/197 (52%), Gaps = 51/197 (25%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 61
D++V+YTI+N+GN ATNV + D+ F PEAFE+ GGQ ++R+ PQTN THV++V+PK
Sbjct: 44 DLLVRYTIFNVGNGAATNVQLVDNGFHPEAFEVVGGQPAATVERIAPQTNFTHVLVVRPK 103
Query: 62 SYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVID 121
++G FNF+ AEVSYK E AE + + SS P E GG
Sbjct: 104 AFGYFNFTAAEVSYKPVEEAETLQL-------------AISSEPGE-----GG------- 138
Query: 122 RVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLIPFLLW 181
IV Y N F+ + DW AFA MTLP L IP +LW
Sbjct: 139 ------------IVNLNEY---NKRFSSHCF---------DWVAFAIMTLPSLAIPLILW 174
Query: 182 FQSKTKYEKLAGGKTKK 198
SK+KYE+ GK KK
Sbjct: 175 HSSKSKYERY--GKNKK 189
>gi|195135078|ref|XP_002011962.1| GI16699 [Drosophila mojavensis]
gi|193918226|gb|EDW17093.1| GI16699 [Drosophila mojavensis]
Length = 190
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/143 (47%), Positives = 86/143 (60%), Gaps = 30/143 (20%)
Query: 84 YTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAF 143
YTI+N+GN ATNV + D+ F P+AFE+ GGQ ++R+ PQTN THV++V+PK++G F
Sbjct: 49 YTIFNVGNGAATNVQLVDNGFHPDAFEVVGGQPSATVERIAPQTNFTHVLVVRPKAFGYF 108
Query: 144 NFSFAEVSYKASENAE-----------DG-----------------DWAAFAFMTLPPLL 175
NF+ AEVSYK E AE +G DW AFA MTLP L
Sbjct: 109 NFTAAEVSYKPIEEAEMLQLAISSEPGEGGIVNLNEYNKRFSSHFFDWVAFAIMTLPSLA 168
Query: 176 IPFLLWFQSKTKYEKLAGGKTKK 198
IP +LW SKTKYE+ GK KK
Sbjct: 169 IPLILWHSSKTKYER--HGKNKK 189
>gi|225708928|gb|ACO10310.1| Translocon-associated protein subunit beta precursor [Caligus
rogercresseyi]
Length = 199
Score = 126 bits (317), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 104/197 (52%), Gaps = 48/197 (24%)
Query: 1 MDVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQP 60
MD+VVKY IYNIG+ A +V VS+ FP ++F++ GQ F +DR+PP +N TH ++V+P
Sbjct: 50 MDIVVKYGIYNIGDLPAVDVSVSEMGFPDDSFDVVSGQTSFKLDRIPPHSNNTHTLVVRP 109
Query: 61 KSYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVI 120
K +G F+F+ AEV Y+ SE A+D I +G S
Sbjct: 110 KKFGYFSFTSAEVKYRVSEEADD--IVQVGLS---------------------------- 139
Query: 121 DRVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLIPFLL 180
++ H VI+ K+Y FS A DW AFA +TLPPL +PF+L
Sbjct: 140 ------SDPGHGVIISLKNYDK-QFS-----------AHILDWIAFAVITLPPLAVPFML 181
Query: 181 WFQSKTKYEKLAGGKTK 197
W+ SK+KYE + G K
Sbjct: 182 WYSSKSKYESIMKGSKK 198
>gi|118787158|ref|XP_556532.2| AGAP005861-PB [Anopheles gambiae str. PEST]
gi|158294897|ref|XP_001688740.1| AGAP005861-PA [Anopheles gambiae str. PEST]
gi|116126666|gb|EAL39950.2| AGAP005861-PB [Anopheles gambiae str. PEST]
gi|157015778|gb|EDO63746.1| AGAP005861-PA [Anopheles gambiae str. PEST]
Length = 192
Score = 126 bits (317), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 76/198 (38%), Positives = 102/198 (51%), Gaps = 50/198 (25%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 61
D+VVKYT+YN+G+ A NV + D+ F PE FE+ GGQ IDR+ PQTNVTH+V+V+PK
Sbjct: 44 DIVVKYTLYNVGSGPAVNVRLVDNGFHPEVFEVVGGQLTASIDRIAPQTNVTHIVVVRPK 103
Query: 62 SYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVID 121
YG NF+ AEV+Y A+E+ AT S SS P E + QF
Sbjct: 104 QYGYLNFTAAEVNYLATED-------------ATEPQFSISSEPGEGAIVAEAQFN---- 146
Query: 122 RVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLIPFLLW 181
K + + DW AFAF+TLP L IP+ +W
Sbjct: 147 ----------------KQFSSHYL----------------DWLAFAFLTLPSLAIPYAMW 174
Query: 182 FQSKTKYEKLAGGKTKKS 199
+ SK+KYE + G +KK+
Sbjct: 175 YSSKSKYEAM-GKSSKKA 191
>gi|114052941|ref|NP_001040332.1| signal sequence receptor beta subunit precursor [Bombyx mori]
gi|87248411|gb|ABD36258.1| signal sequence receptor beta subunit [Bombyx mori]
Length = 190
Score = 125 bits (315), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 76/195 (38%), Positives = 104/195 (53%), Gaps = 49/195 (25%)
Query: 1 MDVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQP 60
MD++VKYT++N+G++ A V + D+ F P+ F + GGQ IDR+ PQTNV+HVV V+
Sbjct: 42 MDILVKYTLFNVGSAPAVEVKLVDNGFHPDVFTVVGGQLTAEIDRIAPQTNVSHVVTVRS 101
Query: 61 KSYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVI 120
YG FNFS AEV+YKASE+A D Y+I ++ +V AF+ +F
Sbjct: 102 NKYGYFNFSSAEVTYKASEDATDVQ-YSISSAPGEGAIV--------AFKDYDRKFS--- 149
Query: 121 DRVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLIPFLL 180
+H++ DWAAFA MTLP L IPF L
Sbjct: 150 ---------SHIL----------------------------DWAAFAVMTLPSLAIPFGL 172
Query: 181 WFQSKTKYEKLAGGK 195
W+ SK+KYEKL+ K
Sbjct: 173 WYSSKSKYEKLSKPK 187
>gi|157124896|ref|XP_001660576.1| translocon-associated protein, beta subunit precursor (trap-beta)
(signal sequence receptor beta subunit) [Aedes aegypti]
gi|94468872|gb|ABF18285.1| translocon-associated complex TRAP beta subunit [Aedes aegypti]
gi|108873816|gb|EAT38041.1| AAEL010032-PA [Aedes aegypti]
Length = 193
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/191 (37%), Positives = 98/191 (51%), Gaps = 49/191 (25%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 61
D+VVKYT+YN+G+ A NV + D+ F PEAF + GGQ IDR+ PQTNVTH+ +V+PK
Sbjct: 45 DIVVKYTLYNVGSGAAVNVQLVDNGFHPEAFTVVGGQLSATIDRIAPQTNVTHIAVVRPK 104
Query: 62 SYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVID 121
+YG FNF+ AEV+Y+ +E E E+Q F +
Sbjct: 105 AYGYFNFTAAEVNYQPAE---------------------------EVTELQ-----FAVS 132
Query: 122 RVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLIPFLLW 181
P + + AE + ++ DW AFA MTLP L IP+ LW
Sbjct: 133 SEPGEGAIV-----------------AEAQFNKQFSSHYLDWFAFAIMTLPSLAIPYGLW 175
Query: 182 FQSKTKYEKLA 192
F SK+KYE L+
Sbjct: 176 FSSKSKYELLS 186
>gi|322785544|gb|EFZ12206.1| hypothetical protein SINV_10588 [Solenopsis invicta]
Length = 202
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 98/201 (48%), Gaps = 57/201 (28%)
Query: 1 MDVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQP 60
MD+V+KYTIYN GN A V ++D+SF P+ F G+ IDRVPP TNV+H V+V+P
Sbjct: 54 MDIVIKYTIYNTGNVAALEVEITDNSFHPDHFTHVSGELNARIDRVPPYTNVSHTVVVRP 113
Query: 61 KSYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPE----AFEIQGGQF 116
+ +G FNF+ AEV Y+ E+A + V+ SS P E A+ QF
Sbjct: 114 RKFGYFNFTSAEVLYRRKEDAP-------------RLQVAVSSEPGEGLIVAYRDYDKQF 160
Query: 117 KFVIDRVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLI 176
+HVV DWAAFA MTLP LLI
Sbjct: 161 S------------SHVV----------------------------DWAAFAVMTLPSLLI 180
Query: 177 PFLLWFQSKTKYEKLAGGKTK 197
PF LW+ SK KYEKL K
Sbjct: 181 PFALWYSSKCKYEKLLKNTKK 201
>gi|225719752|gb|ACO15722.1| Translocon-associated protein subunit beta precursor [Caligus
clemensi]
Length = 199
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 103/197 (52%), Gaps = 48/197 (24%)
Query: 1 MDVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQP 60
MD+V+KY IYN+G+ A +V V + FP ++F++ G F +DRVPP +N TH ++V+P
Sbjct: 50 MDIVIKYGIYNVGDLPAVDVSVKEVGFPEDSFDLVSGHASFKLDRVPPHSNNTHTLVVRP 109
Query: 61 KSYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVI 120
K +G FNF+ AE+ Y+ SE A+D + IG+S
Sbjct: 110 KKFGYFNFTSAEIKYRVSEEADD--VVQIGSS---------------------------- 139
Query: 121 DRVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLIPFLL 180
++ H VI+ K+Y FS A DW AFA +TLPPL +PF+L
Sbjct: 140 ------SDPGHGVIISLKNYDK-QFS-----------AHILDWIAFAVITLPPLGVPFML 181
Query: 181 WFQSKTKYEKLAGGKTK 197
W+ SK+KYE + G K
Sbjct: 182 WYSSKSKYESILRGSKK 198
>gi|332017836|gb|EGI58496.1| Translocon-associated protein subunit beta [Acromyrmex echinatior]
Length = 191
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 98/201 (48%), Gaps = 57/201 (28%)
Query: 1 MDVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQP 60
MD+V+KYTIYN GN A V ++D+SF P+ F G+ IDRVPP TNV+H V+V+P
Sbjct: 43 MDIVIKYTIYNTGNVAALEVEITDNSFHPDHFTHVSGELNARIDRVPPYTNVSHTVVVRP 102
Query: 61 KSYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPE----AFEIQGGQF 116
+ +G FNF+ AEV Y+ E+A + V+ SS P E A+ QF
Sbjct: 103 RKFGYFNFTSAEVLYRRKEDAP-------------RLQVAVSSEPGEGLIVAYRDYDKQF 149
Query: 117 KFVIDRVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLI 176
+HVV DWAAFA MTLP LLI
Sbjct: 150 S------------SHVV----------------------------DWAAFAVMTLPSLLI 169
Query: 177 PFLLWFQSKTKYEKLAGGKTK 197
PF LW+ SK KYEKL K
Sbjct: 170 PFALWYSSKCKYEKLLKNTKK 190
>gi|357608662|gb|EHJ66087.1| signal sequence receptor beta subunit [Danaus plexippus]
Length = 149
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/195 (37%), Positives = 104/195 (53%), Gaps = 49/195 (25%)
Query: 1 MDVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQP 60
MD+++KYT++N+G + A +V + D+ F PE F + GGQ IDR+PPQTNV+HVV V+
Sbjct: 1 MDILIKYTLFNVGTAPAVDVKLVDNGFHPEVFAVVGGQLSAHIDRIPPQTNVSHVVTVRS 60
Query: 61 KSYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVI 120
YG FNF+ AEV+YK SE++ + Y+I ++ +V AF+ +F
Sbjct: 61 NRYGYFNFTAAEVTYKPSEDSAEVQ-YSISSAPGEGTIV--------AFKDYDRKFS--- 108
Query: 121 DRVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLIPFLL 180
+H++ DWAAFA MTLP L IPF L
Sbjct: 109 ---------SHIL----------------------------DWAAFAVMTLPSLAIPFGL 131
Query: 181 WFQSKTKYEKLAGGK 195
W+ SK+KYEKL+ K
Sbjct: 132 WYSSKSKYEKLSKPK 146
>gi|224924406|gb|ACN69153.1| translocon-associated complex TRAP, beta subunit [Stomoxys
calcitrans]
Length = 192
Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/197 (40%), Positives = 105/197 (53%), Gaps = 51/197 (25%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 61
D++V+YT+YN+GN ATN+ + D+ F PEAFEI GG+ ++R+ PQ N THVV+V+PK
Sbjct: 46 DLLVRYTLYNVGNGAATNIKLVDNGFHPEAFEIVGGKPSANVERLAPQANYTHVVVVRPK 105
Query: 62 SYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVID 121
++G FNF+ AEVSYK E AE + ++ SS P E GG
Sbjct: 106 AHGYFNFTAAEVSYKPVEEAEK-------------IQLAVSSEPGE-----GG------- 140
Query: 122 RVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLIPFLLW 181
IV + G FN F+ + DW AFA MTLP L IP LW
Sbjct: 141 ------------IV---NLGEFNRRFSSHFF---------DWIAFAIMTLPSLAIPLALW 176
Query: 182 FQSKTKYEKLAGGKTKK 198
SK+KYE+ GK KK
Sbjct: 177 HSSKSKYER--PGKNKK 191
>gi|195016435|ref|XP_001984410.1| GH16443 [Drosophila grimshawi]
gi|193897892|gb|EDV96758.1| GH16443 [Drosophila grimshawi]
Length = 190
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/143 (46%), Positives = 84/143 (58%), Gaps = 30/143 (20%)
Query: 84 YTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAF 143
YTI+N+GN AT+V + D+ F PE FE+ GGQ ++R+ PQTN THV++V+PKS G F
Sbjct: 49 YTIFNVGNGAATSVQLVDNGFHPEVFEVVGGQPTATVERIAPQTNFTHVLVVRPKSSGYF 108
Query: 144 NFSFAEVSYKASENAE-----------DG-----------------DWAAFAFMTLPPLL 175
NF+ AEVSYK E AE +G DW AFA MTLP L
Sbjct: 109 NFTAAEVSYKPVEEAETLQLAISSEPGEGGIVNLNEYNKRFSSHFFDWVAFAIMTLPSLA 168
Query: 176 IPFLLWFQSKTKYEKLAGGKTKK 198
IP +LW SK+KYE+ GK KK
Sbjct: 169 IPLILWHSSKSKYER--HGKNKK 189
>gi|66501038|ref|XP_623954.1| PREDICTED: translocon-associated protein subunit beta isoform 2
[Apis mellifera]
gi|328792432|ref|XP_003251723.1| PREDICTED: translocon-associated protein subunit beta isoform 1
[Apis mellifera]
Length = 191
Score = 122 bits (306), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 78/197 (39%), Positives = 101/197 (51%), Gaps = 49/197 (24%)
Query: 1 MDVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQP 60
MD+V+KYT+YNIG++ A V ++D+SF P+ F G+ IDRVPP TNV+H VIV+P
Sbjct: 43 MDIVIKYTVYNIGSAAALEVEITDNSFHPDHFTHVSGELNARIDRVPPYTNVSHTVIVRP 102
Query: 61 KSYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVI 120
+ +G FNF+ AEV Y+ E+A ++ + SS P EA
Sbjct: 103 RKFGYFNFTSAEVLYRRKEDAP-------------SLQFAASSEPGEA------------ 137
Query: 121 DRVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLIPFLL 180
VIV + Y FS V DWAAFA MTLP L IPF L
Sbjct: 138 ------------VIVSFRDYDK-QFSSHVV-----------DWAAFAVMTLPSLAIPFAL 173
Query: 181 WFQSKTKYEKLAGGKTK 197
W+ SK+KYEKL K
Sbjct: 174 WYSSKSKYEKLLKTTKK 190
>gi|350419189|ref|XP_003492100.1| PREDICTED: translocon-associated protein subunit beta-like [Bombus
impatiens]
Length = 191
Score = 122 bits (306), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 100/197 (50%), Gaps = 49/197 (24%)
Query: 1 MDVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQP 60
MD+V+KYT+YN+G++ A V ++D+SF P+ F G+ IDRVPP TNV+H+V+V+P
Sbjct: 43 MDIVIKYTVYNVGSAAALEVEITDNSFHPDHFTHISGELNARIDRVPPYTNVSHIVVVRP 102
Query: 61 KSYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVI 120
+ +G FNF+ AEV YK E+A Y + + ++VS F QF
Sbjct: 103 RKFGYFNFTSAEVLYKRKEDAP-YLQFAASSEPGEAIIVS--------FRDYDKQFS--- 150
Query: 121 DRVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLIPFLL 180
+HVV DWAAFA MTLP L IPF L
Sbjct: 151 ---------SHVV----------------------------DWAAFAVMTLPSLAIPFAL 173
Query: 181 WFQSKTKYEKLAGGKTK 197
W+ SK+KYEKL K
Sbjct: 174 WYSSKSKYEKLLKTTKK 190
>gi|380023550|ref|XP_003695581.1| PREDICTED: translocon-associated protein subunit beta-like [Apis
florea]
Length = 192
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/197 (39%), Positives = 101/197 (51%), Gaps = 49/197 (24%)
Query: 1 MDVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQP 60
MD+V+KYT+YNIG++ A V ++D+SF P+ F G+ IDRVPP TNV+H V+V+P
Sbjct: 44 MDIVIKYTVYNIGSAAALEVEITDNSFHPDHFTHVSGELNARIDRVPPYTNVSHTVVVRP 103
Query: 61 KSYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVI 120
+ +G FNF+ AEV Y+ E+A ++ + SS P EA
Sbjct: 104 RKFGYFNFTSAEVLYRRKEDAP-------------SLQFAASSEPGEA------------ 138
Query: 121 DRVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLIPFLL 180
VIV + Y FS V DWAAFA MTLP L IPF L
Sbjct: 139 ------------VIVSFRDYDK-QFSSHVV-----------DWAAFAVMTLPSLAIPFAL 174
Query: 181 WFQSKTKYEKLAGGKTK 197
W+ SK+KYEKL K
Sbjct: 175 WYSSKSKYEKLLKTTKK 191
>gi|340708800|ref|XP_003393009.1| PREDICTED: translocon-associated protein subunit beta-like [Bombus
terrestris]
Length = 199
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 100/197 (50%), Gaps = 49/197 (24%)
Query: 1 MDVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQP 60
MD+V+KYT+YNIG++ A V ++D+SF P+ F G+ IDRVPP TNV+H+VIV+
Sbjct: 51 MDIVIKYTVYNIGSAAALEVKITDNSFHPDYFTHVSGELNARIDRVPPYTNVSHIVIVRS 110
Query: 61 KSYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVI 120
+ +G FNF+ AEV YK E+A + + + T ++VS F QF
Sbjct: 111 RKFGYFNFTSAEVLYKRKEDAPNLQ-FAASSEPGTAIIVS--------FRDYDKQFS--- 158
Query: 121 DRVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLIPFLL 180
+HVV DWAAFA MTLP L IPF L
Sbjct: 159 ---------SHVV----------------------------DWAAFAVMTLPSLAIPFAL 181
Query: 181 WFQSKTKYEKLAGGKTK 197
W+ SK+KYEKL K
Sbjct: 182 WYSSKSKYEKLLKTTKK 198
>gi|383856498|ref|XP_003703745.1| PREDICTED: translocon-associated protein subunit beta-like
[Megachile rotundata]
Length = 191
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 99/201 (49%), Gaps = 57/201 (28%)
Query: 1 MDVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQP 60
MD+V+KYT+YN+GN+ A V ++D+SF P+ F G+ IDRVPP TNV+H V+V+P
Sbjct: 43 MDIVIKYTVYNVGNAAALEVEITDNSFHPDHFTHVSGEINARIDRVPPYTNVSHTVVVRP 102
Query: 61 KSYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEA----FEIQGGQF 116
+ +G FNF+ AEV Y+ E+A + + SS P EA F QF
Sbjct: 103 RKFGYFNFTSAEVLYRRKEDAP-------------RLQFAASSEPGEAIIVSFRDYDKQF 149
Query: 117 KFVIDRVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLI 176
+HVV DWAAFA MTLP L I
Sbjct: 150 S------------SHVV----------------------------DWAAFAVMTLPSLAI 169
Query: 177 PFLLWFQSKTKYEKLAGGKTK 197
PF LW+ SK+KYEKL K
Sbjct: 170 PFALWYSSKSKYEKLLKTTKK 190
>gi|225712054|gb|ACO11873.1| Translocon-associated protein subunit beta precursor
[Lepeophtheirus salmonis]
Length = 198
Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 99/191 (51%), Gaps = 48/191 (25%)
Query: 1 MDVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQP 60
MD+VVKY IYNIG A +V V + FP ++F++ G F +DR+PP +N TH ++V+P
Sbjct: 49 MDIVVKYAIYNIGEQPAVDVQVKEVGFPEDSFDVVSGHASFKLDRIPPHSNNTHTLVVRP 108
Query: 61 KSYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVI 120
K +G FNF+ AEV Y+ S+ A+D IQ G
Sbjct: 109 KKFGYFNFTSAEVKYRVSDEADDI--------------------------IQTG------ 136
Query: 121 DRVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLIPFLL 180
+++ H VI+ K+Y FS A DW AFA +TLPPL +PF+L
Sbjct: 137 ----ASSDLGHGVIISLKNYDK-QFS-----------AHILDWIAFAVITLPPLGVPFML 180
Query: 181 WFQSKTKYEKL 191
W+ S++KYE +
Sbjct: 181 WYSSESKYESI 191
>gi|225712622|gb|ACO12157.1| Translocon-associated protein subunit beta precursor
[Lepeophtheirus salmonis]
gi|225714650|gb|ACO13171.1| Translocon-associated protein subunit beta precursor
[Lepeophtheirus salmonis]
Length = 198
Score = 120 bits (300), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 98/191 (51%), Gaps = 48/191 (25%)
Query: 1 MDVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQP 60
MD+VVKY IYNIG A +V V + FP ++F++ G F +DR+PP +N TH ++V+P
Sbjct: 49 MDIVVKYAIYNIGEQPAVDVQVKEVGFPEDSFDVVSGHASFKLDRIPPHSNNTHTLVVRP 108
Query: 61 KSYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVI 120
K +G FNF+ AEV Y+ S+ A+D IQ G
Sbjct: 109 KKFGYFNFTSAEVKYRVSDEADDI--------------------------IQTGA----- 137
Query: 121 DRVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLIPFLL 180
++ H VI+ K+Y FS A DW AFA +TLPPL +PF+L
Sbjct: 138 -----SSDPGHGVIISLKNYDK-QFS-----------AHILDWIAFAVITLPPLGVPFML 180
Query: 181 WFQSKTKYEKL 191
W+ SK+KYE +
Sbjct: 181 WYSSKSKYESI 191
>gi|290562754|gb|ADD38772.1| Translocon-associated protein subunit beta [Lepeophtheirus
salmonis]
Length = 198
Score = 119 bits (298), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 97/189 (51%), Gaps = 48/189 (25%)
Query: 1 MDVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQP 60
MD+VVKY IYNIG A +V V + FP ++F++ G F +DR+PP +N TH ++V+P
Sbjct: 49 MDIVVKYAIYNIGEQPAVDVQVKEVGFPEDSFDVVSGHASFKLDRIPPHSNNTHTLVVRP 108
Query: 61 KSYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVI 120
K +G FNF+ AEV Y+ S+ A+D IQ G
Sbjct: 109 KKFGYFNFTSAEVQYRVSDEADDI--------------------------IQTG------ 136
Query: 121 DRVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLIPFLL 180
++ H VI+ K+Y FS A DW AFA +TLPPL +PF+L
Sbjct: 137 ----ASSDPGHGVIISLKNYDK-QFS-----------AHILDWIAFAVITLPPLGVPFML 180
Query: 181 WFQSKTKYE 189
W+ SK+KYE
Sbjct: 181 WYSSKSKYE 189
>gi|156550476|ref|XP_001602398.1| PREDICTED: translocon-associated protein subunit beta-like isoform
1 [Nasonia vitripennis]
gi|345488529|ref|XP_003425930.1| PREDICTED: translocon-associated protein subunit beta-like isoform
2 [Nasonia vitripennis]
Length = 192
Score = 119 bits (298), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 98/197 (49%), Gaps = 49/197 (24%)
Query: 1 MDVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQP 60
MDV+VKYT+YN G++ A V ++D+SF P+ F G+ IDRVPP TNVTH V+V+P
Sbjct: 44 MDVIVKYTVYNTGSAAALEVEITDNSFDPDNFAHVSGELSARIDRVPPNTNVTHTVVVRP 103
Query: 61 KSYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVI 120
+ G FNF+ AEV Y+ ++ A + V+ SS P AF ++
Sbjct: 104 RKPGYFNFTSAEVLYRRKDD-------------APRLQVAASSEPGLAFFTSYKEYD--- 147
Query: 121 DRVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLIPFLL 180
+ +HV+ DWAAFA MTLP L IPF L
Sbjct: 148 -----KKFSSHVI----------------------------DWAAFAVMTLPSLAIPFAL 174
Query: 181 WFQSKTKYEKLAGGKTK 197
WF SK KYEKL+ +
Sbjct: 175 WFSSKRKYEKLSKSTKR 191
>gi|91092204|ref|XP_969577.1| PREDICTED: similar to signal sequence receptor beta subunit
[Tribolium castaneum]
gi|270014481|gb|EFA10929.1| hypothetical protein TcasGA2_TC001756 [Tribolium castaneum]
Length = 190
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/190 (38%), Positives = 92/190 (48%), Gaps = 50/190 (26%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 61
D+ VKYT+YN+G S A V + D+ F PEAFE+ GG +R+ PQTNV+HVV+V+PK
Sbjct: 43 DIEVKYTLYNVGTSAAVGVQLVDNGFHPEAFEVVGGHLSAKFERILPQTNVSHVVVVRPK 102
Query: 62 SYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVID 121
YG FNF+ AE +YK NS A+ V VS SS P E GG F
Sbjct: 103 RYGYFNFTSAEATYK--------------NSDASVVQVSLSSEPGE-----GGIIAF--- 140
Query: 122 RVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLIPFLLW 181
Y ++ DW AF MT P L IP LW
Sbjct: 141 ----------------------------RDYDKKFSSHTWDWLAFTLMTTPSLAIPLALW 172
Query: 182 FQSKTKYEKL 191
+ SK+KYEKL
Sbjct: 173 YGSKSKYEKL 182
>gi|241740497|ref|XP_002414113.1| signal sequence receptor beta [Ixodes scapularis]
gi|215507967|gb|EEC17421.1| signal sequence receptor beta [Ixodes scapularis]
gi|442756205|gb|JAA70262.1| Putative signal sequence receptor beta [Ixodes ricinus]
Length = 191
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/137 (45%), Positives = 79/137 (57%), Gaps = 28/137 (20%)
Query: 83 DYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGA 142
DY IYN+G S A +V V D+SF FE+ G KF +DR+PP +NVTH +V+ YG
Sbjct: 48 DYNIYNVGGSAALDVKVVDNSFGEGDFEVVSGLLKFKLDRLPPGSNVTHTAVVRAIKYGR 107
Query: 143 FNFSFAEVSYKASEN---------AEDG-------------------DWAAFAFMTLPPL 174
FNF+ AEV+Y++SE+ AE G DW AFA MTLP L
Sbjct: 108 FNFTSAEVTYRSSEDSKELQFAHTAEPGEGGIIAVKDFDRKFSPHVLDWLAFAVMTLPSL 167
Query: 175 LIPFLLWFQSKTKYEKL 191
IPFLLWF SK+KYE +
Sbjct: 168 GIPFLLWFNSKSKYEAI 184
>gi|67083809|gb|AAY66839.1| signal sequence receptor beta [Ixodes scapularis]
Length = 191
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/137 (45%), Positives = 79/137 (57%), Gaps = 28/137 (20%)
Query: 83 DYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGA 142
DY IYN+G S A +V V D+SF FE+ G KF +DR+PP +NVTH +V+ YG
Sbjct: 48 DYNIYNVGGSAALDVKVVDNSFGEGDFEVVSGLLKFKLDRLPPGSNVTHTAVVRAIKYGR 107
Query: 143 FNFSFAEVSYKASEN---------AEDG-------------------DWAAFAFMTLPPL 174
FNF+ AEV+Y++SE+ AE G DW AFA MTLP L
Sbjct: 108 FNFTSAEVTYRSSEDSKELQFAHTAEPGEGSIIAVKDFDRKFSPHVLDWLAFAVMTLPSL 167
Query: 175 LIPFLLWFQSKTKYEKL 191
IPFLLWF SK+KYE +
Sbjct: 168 GIPFLLWFNSKSKYEAI 184
>gi|321468810|gb|EFX79793.1| hypothetical protein DAPPUDRAFT_230994 [Daphnia pulex]
Length = 191
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 102/198 (51%), Gaps = 49/198 (24%)
Query: 1 MDVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQP 60
MD+V+KY+++N+G + A +V V+D++F P+ FE+ GGQ K IDR+ P +N THVV+++P
Sbjct: 43 MDIVIKYSLFNVGGTAALDVQVADNTFGPQDFEVVGGQLKVTIDRIAPGSNATHVVVIRP 102
Query: 61 KSYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVI 120
+G FNF+ AEV+Y SENA + +V SS P GQ V
Sbjct: 103 SKFGYFNFTAAEVTYLPSENAAE-------------ALVGLSSEP--------GQGAIV- 140
Query: 121 DRVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLIPFLL 180
F E K S + DW +FA M++P L++PF L
Sbjct: 141 -------------------------PFKEYDRKFSPHLL--DWLSFAVMSMPSLVLPFAL 173
Query: 181 WFQSKTKYEKLAGGKTKK 198
WF SK+KYE + K K
Sbjct: 174 WFSSKSKYEAVLTQKKDK 191
>gi|307169164|gb|EFN61980.1| Translocon-associated protein subunit beta [Camponotus floridanus]
Length = 191
Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 96/201 (47%), Gaps = 57/201 (28%)
Query: 1 MDVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQP 60
MD+V+KYTIYN GN A+ V ++D+SF P+ F G+ ID VPP TNV+H V+V+P
Sbjct: 43 MDIVIKYTIYNTGNVAASEVEITDNSFHPDHFTHVSGELNARIDNVPPYTNVSHTVVVRP 102
Query: 61 KSYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPE----AFEIQGGQF 116
+ G FNF+ AEV Y+ + A + V+ SS P E A+ QF
Sbjct: 103 RKSGYFNFTSAEVLYRRFQEAP-------------RLQVAVSSEPGEGLIVAYRDYDKQF 149
Query: 117 KFVIDRVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLI 176
+HVV DWAAFA MTLP LLI
Sbjct: 150 S------------SHVV----------------------------DWAAFAVMTLPSLLI 169
Query: 177 PFLLWFQSKTKYEKLAGGKTK 197
PF LW+ SK KYEKL K
Sbjct: 170 PFALWYSSKCKYEKLLKNTKK 190
>gi|346464523|gb|AEO32106.1| hypothetical protein [Amblyomma maculatum]
Length = 195
Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 58/137 (42%), Positives = 80/137 (58%), Gaps = 28/137 (20%)
Query: 83 DYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGA 142
DY IYN+G S A ++ V D+SF P+ F++ G F ++R+ P +NVTH V+V+P + G
Sbjct: 52 DYNIYNVGGSAALDIKVVDNSFNPQHFQVTSGLLSFKLNRLAPGSNVTHTVVVRPLTPGR 111
Query: 143 FNFSFAEVSYKASENAED----------------------------GDWAAFAFMTLPPL 174
FNF+ AEVSY+ SE++++ DW AFA MTLP L
Sbjct: 112 FNFTSAEVSYRTSEDSQEIQYAHTAEPGEGGIIPVRDFDRKFSPHVTDWLAFAVMTLPSL 171
Query: 175 LIPFLLWFQSKTKYEKL 191
IPFLLWF SK+KYE +
Sbjct: 172 GIPFLLWFNSKSKYEAI 188
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 59/82 (71%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 61
D+VV Y IYN+G S A ++ V D+SF P+ F++ G F ++R+ P +NVTH V+V+P
Sbjct: 48 DIVVDYNIYNVGGSAALDIKVVDNSFNPQHFQVTSGLLSFKLNRLAPGSNVTHTVVVRPL 107
Query: 62 SYGAFNFSFAEVSYKASENAED 83
+ G FNF+ AEVSY+ SE++++
Sbjct: 108 TPGRFNFTSAEVSYRTSEDSQE 129
>gi|427783565|gb|JAA57234.1| Putative translocon-associated complex trap beta subunit
[Rhipicephalus pulchellus]
Length = 189
Score = 115 bits (289), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 81/137 (59%), Gaps = 28/137 (20%)
Query: 83 DYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGA 142
DY IYN+G S A ++ +SD+SF P FE+ G F ++R+ P +NVTH ++++P ++G
Sbjct: 46 DYNIYNVGGSAALDIKLSDNSFNPAYFEVTSGLLSFKLNRLAPGSNVTHTIVIRPLTFGY 105
Query: 143 FNFSFAEVSYKASENAED----------------------------GDWAAFAFMTLPPL 174
FNF+ A+VSY+ SE++++ DW AFA MTLP L
Sbjct: 106 FNFTSADVSYRTSEDSQEVQFAHTAEPGQGGIMPVRDFDRKFSPHVTDWLAFAIMTLPSL 165
Query: 175 LIPFLLWFQSKTKYEKL 191
IPF+LWF SK+KYE +
Sbjct: 166 GIPFVLWFNSKSKYENI 182
>gi|443706692|gb|ELU02607.1| hypothetical protein CAPTEDRAFT_184319 [Capitella teleta]
Length = 185
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/135 (43%), Positives = 76/135 (56%), Gaps = 28/135 (20%)
Query: 84 YTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAF 143
Y I+N+G S A V ++D+SFP FE+ G + +R+ P +NV+H VI++P G F
Sbjct: 43 YNIFNVGGSAAREVSLTDASFPESDFEVIQGSLEVNWNRLAPGSNVSHAVILRPTKSGYF 102
Query: 144 NFSFAEVSYKASENA------------EDG----------------DWAAFAFMTLPPLL 175
NF+ AE+SY ASE A E G DWAAFA MTLP L
Sbjct: 103 NFTSAEISYLASEEASERQIGYTSGPGEGGIMHHRDYDRKFSPHVIDWAAFAVMTLPSLG 162
Query: 176 IPFLLWFQSKTKYEK 190
IPFLLWF SK+KY+K
Sbjct: 163 IPFLLWFSSKSKYDK 177
>gi|390358461|ref|XP_792530.2| PREDICTED: translocon-associated protein subunit beta-like isoform
2 [Strongylocentrotus purpuratus]
Length = 211
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/199 (35%), Positives = 91/199 (45%), Gaps = 55/199 (27%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 61
D+ V YTIYN+G+S A+ VV++D SF F + GQ K DR+ P +NVTH VI+QP
Sbjct: 65 DMTVLYTIYNVGSSAASQVVLNDESFAESDFAVVSGQLKVQWDRISPASNVTHAVILQPL 124
Query: 62 SYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVS--DSSFPPEAFEIQGGQFKFV 119
G +N + A V+Y SE +E T Y A V V D F P +
Sbjct: 125 KNGFYNVTHATVTYVPSEGSEARTAYTSAPGKAGVVAVKDYDRRFSPHYMD--------- 175
Query: 120 IDRVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLIPFL 179
WAAFA MT+ P+ IPFL
Sbjct: 176 -------------------------------------------WAAFAVMTIAPIGIPFL 192
Query: 180 LWFQSKTKYEKLAGGKTKK 198
LWF+SK+KYE L+ KTKK
Sbjct: 193 LWFRSKSKYEALS-FKTKK 210
>gi|390358459|ref|XP_003729262.1| PREDICTED: translocon-associated protein subunit beta-like isoform
1 [Strongylocentrotus purpuratus]
Length = 186
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/199 (35%), Positives = 91/199 (45%), Gaps = 55/199 (27%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 61
D+ V YTIYN+G+S A+ VV++D SF F + GQ K DR+ P +NVTH VI+QP
Sbjct: 40 DMTVLYTIYNVGSSAASQVVLNDESFAESDFAVVSGQLKVQWDRISPASNVTHAVILQPL 99
Query: 62 SYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVS--DSSFPPEAFEIQGGQFKFV 119
G +N + A V+Y SE +E T Y A V V D F P +
Sbjct: 100 KNGFYNVTHATVTYVPSEGSEARTAYTSAPGKAGVVAVKDYDRRFSPHYMD--------- 150
Query: 120 IDRVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLIPFL 179
WAAFA MT+ P+ IPFL
Sbjct: 151 -------------------------------------------WAAFAVMTIAPIGIPFL 167
Query: 180 LWFQSKTKYEKLAGGKTKK 198
LWF+SK+KYE L+ KTKK
Sbjct: 168 LWFRSKSKYEALS-FKTKK 185
>gi|332375172|gb|AEE62727.1| unknown [Dendroctonus ponderosae]
Length = 194
Score = 106 bits (265), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 57/137 (41%), Positives = 76/137 (55%), Gaps = 29/137 (21%)
Query: 84 YTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAF 143
Y I+NIG + A NV ++D F EAFEI GG R+PP++N THVV+V+P +G F
Sbjct: 51 YAIHNIGKAPAVNVQLTDVGFNSEAFEIVGGHLSTKFARIPPESNFTHVVVVRPNRFGFF 110
Query: 144 NFSFAEVSYK-------------ASENAEDG----------------DWAAFAFMTLPPL 174
NF+ +++SYK +SE E G DW AFA M+LP L
Sbjct: 111 NFTSSQISYKLSDAPDAKTQVSYSSEPGEGGIVAFRDFDKKFSAHYWDWFAFAVMSLPSL 170
Query: 175 LIPFLLWFQSKTKYEKL 191
IP +LW+ SK+ YEKL
Sbjct: 171 AIPLMLWYNSKSAYEKL 187
>gi|405974297|gb|EKC38953.1| Translocon-associated protein subunit beta [Crassostrea gigas]
Length = 1284
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 93/188 (49%), Gaps = 49/188 (26%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 61
D+ V+YTI+NIG S A +V + + SFP + FE+ G +R+ P TNV+HVV+++P
Sbjct: 1139 DLTVQYTIFNIGGSAALDVNLKEESFPEQDFEVVKGNLNVKWERIAPGTNVSHVVVLRPL 1198
Query: 62 SYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVID 121
+G FNF+ AEVSYK SEN A + VV +S P E + F
Sbjct: 1199 QFGYFNFTAAEVSYKPSEN-------------AASAVVGFTSAPGEGGIVGSKDFD---R 1242
Query: 122 RVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLIPFLLW 181
+ P HV+ DW FA MTLP L IPFLL+
Sbjct: 1243 KFSP-----HVL----------------------------DWLVFAIMTLPSLTIPFLLF 1269
Query: 182 FQSKTKYE 189
++SK++Y+
Sbjct: 1270 YRSKSRYD 1277
>gi|58801260|ref|NP_001001399.1| translocon-associated protein subunit beta precursor [Danio rerio]
gi|50370027|gb|AAH75915.1| Signal sequence receptor, beta [Danio rerio]
Length = 184
Score = 102 bits (255), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 55/133 (41%), Positives = 69/133 (51%), Gaps = 27/133 (20%)
Query: 84 YTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAF 143
Y+IYN+G S A V +SD SFPPE F I G DR+ P +NV+H V+++P G F
Sbjct: 45 YSIYNVGTSAALEVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYF 104
Query: 144 NFSFAEVSYKASENAE----------DG-----------------DWAAFAFMTLPPLLI 176
NF+ A VSY A E + G DWAAF MTLP + I
Sbjct: 105 NFTSASVSYLAQEGGQVVVGYTSAPGQGGILAQREFDRRFSPHYLDWAAFGVMTLPSIGI 164
Query: 177 PFLLWFQSKTKYE 189
P LLW+ SK KY+
Sbjct: 165 PLLLWYSSKRKYD 177
>gi|40643038|emb|CAD91446.1| signal sequence receptor beta-like protein [Crassostrea gigas]
Length = 188
Score = 102 bits (255), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 93/188 (49%), Gaps = 49/188 (26%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 61
D+ V+YTI+NIG S A +V + + SFP + FE+ G +R+ P TNV+HVV+++P
Sbjct: 43 DLTVQYTIFNIGGSAALDVNLKEESFPEQDFEVVKGNLNVKWERIAPGTNVSHVVVLRPL 102
Query: 62 SYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVID 121
+G FNF+ AEVSYK SEN A + VV +S P E + F
Sbjct: 103 QFGYFNFTAAEVSYKPSEN-------------AASAVVGFTSAPGEGGIVGSKDFD---R 146
Query: 122 RVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLIPFLLW 181
+ P HV+ DW FA MTLP L IPFLL+
Sbjct: 147 KFSP-----HVL----------------------------DWLVFAIMTLPSLTIPFLLF 173
Query: 182 FQSKTKYE 189
++SK++Y+
Sbjct: 174 YRSKSRYD 181
>gi|14348866|gb|AAK61351.1| translocon-associated protein beta [Danio rerio]
Length = 183
Score = 102 bits (255), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 55/133 (41%), Positives = 69/133 (51%), Gaps = 27/133 (20%)
Query: 84 YTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAF 143
Y+IYN+G S A V +SD SFPPE F I G DR+ P +NV+H V+++P G F
Sbjct: 44 YSIYNVGTSAALEVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYF 103
Query: 144 NFSFAEVSYKASENAE----------DG-----------------DWAAFAFMTLPPLLI 176
NF+ A VSY A E + G DWAAF MTLP + I
Sbjct: 104 NFTSASVSYLAQEGGQVVVGYTSAPGQGGILAQREFDRRFSPHYLDWAAFGVMTLPSIGI 163
Query: 177 PFLLWFQSKTKYE 189
P LLW+ SK KY+
Sbjct: 164 PLLLWYSSKRKYD 176
>gi|226371906|gb|ACO51578.1| Translocon-associated protein subunit beta precursor [Rana
catesbeiana]
Length = 183
Score = 102 bits (254), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 90/188 (47%), Gaps = 50/188 (26%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 61
D+ ++Y IYN+G+S A +V +SD SFPPE F I G DR+ P +NV+H V+++P
Sbjct: 39 DLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVAGMLNVKWDRIAPASNVSHTVVLRPL 98
Query: 62 SYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVID 121
G FNF+ A ++Y A E A+ VVV +S P QGG
Sbjct: 99 KAGYFNFTSATMTYLAQEGAQ--------------VVVGYTSAPG-----QGG------- 132
Query: 122 RVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLIPFLLW 181
++ Q + F+ F DWAAF MTLP + IP LLW
Sbjct: 133 -----------ILAQREFDRRFSPHFL-------------DWAAFGVMTLPSIGIPLLLW 168
Query: 182 FQSKTKYE 189
F SK KY+
Sbjct: 169 FSSKRKYD 176
>gi|126697398|gb|ABO26656.1| signal sequence receptor beta-like protein [Haliotis discus discus]
Length = 189
Score = 102 bits (254), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 72/135 (53%), Gaps = 28/135 (20%)
Query: 83 DYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGA 142
+Y I+N+G S A V + D SFP FE+ G + +R+ P +NVTH VI++P G
Sbjct: 48 EYRIFNVGGSAALGVQLKDDSFPEADFEVVNGNLQVQWERIAPNSNVTHAVILRPTKSGY 107
Query: 143 FNFSFAEVSYKASENA------------EDG----------------DWAAFAFMTLPPL 174
FNF+ AEVSYK SE A E G DW FA MTLP L
Sbjct: 108 FNFTSAEVSYKVSEEAAETQFGYTSAPGEGGIVNKKDFERRFSPHVLDWLVFAVMTLPSL 167
Query: 175 LIPFLLWFQSKTKYE 189
IP+LLW+ SK++Y+
Sbjct: 168 GIPYLLWYSSKSRYD 182
>gi|197127486|gb|ACH43984.1| putative signal sequence receptor beta variant 1 [Taeniopygia
guttata]
Length = 183
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 71/133 (53%), Gaps = 27/133 (20%)
Query: 84 YTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAF 143
Y IYN+G+S A +V +SD SFPPE F I G DR+ P +NV+H V+++P G F
Sbjct: 44 YNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLSVKWDRIAPASNVSHTVVLRPLKAGYF 103
Query: 144 NFSFAEVSYKASENAE----------DG-----------------DWAAFAFMTLPPLLI 176
NF+ A ++Y A E A+ G DWAAF MTLP + I
Sbjct: 104 NFTSATITYLAQEGAQVVAGFTSAPGQGGILAQRDFDRRFSPHFLDWAAFGVMTLPSIGI 163
Query: 177 PFLLWFQSKTKYE 189
P LLW+ SK KY+
Sbjct: 164 PLLLWYSSKRKYD 176
>gi|148233495|ref|NP_001079681.1| signal sequence receptor, beta precursor [Xenopus laevis]
gi|13194764|gb|AAK15544.1| signal sequence receptor beta subunit [Xenopus laevis]
gi|28422221|gb|AAH46938.1| MGC53499 protein [Xenopus laevis]
Length = 183
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 88/188 (46%), Gaps = 50/188 (26%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 61
D+ ++Y IYN+G+S A V +SD SFPPE F I G DR+ P +NV+H V+++P
Sbjct: 39 DLTLQYNIYNVGSSAALEVELSDDSFPPEDFGIVSGMLSVKWDRIAPASNVSHTVVLRPL 98
Query: 62 SYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVID 121
G FNF+ A V+Y A E E VVV +S P QGG
Sbjct: 99 KAGYFNFTSATVAYLAQEGGE--------------VVVGYTSAPG-----QGG------- 132
Query: 122 RVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLIPFLLW 181
++ Q + F+ F DWAAF MTLP + IP LLW
Sbjct: 133 -----------ILAQREFDRRFSPHFL-------------DWAAFGVMTLPSIGIPLLLW 168
Query: 182 FQSKTKYE 189
F SK KY+
Sbjct: 169 FSSKRKYD 176
>gi|426332015|ref|XP_004026988.1| PREDICTED: translocon-associated protein subunit beta isoform 1
[Gorilla gorilla gorilla]
gi|426332017|ref|XP_004026989.1| PREDICTED: translocon-associated protein subunit beta isoform 2
[Gorilla gorilla gorilla]
Length = 202
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/142 (40%), Positives = 75/142 (52%), Gaps = 30/142 (21%)
Query: 84 YTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAF 143
Y IYN+G+S A +V +SD SFPPE F I G DR+ P +NV+H V+++P G F
Sbjct: 63 YNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYF 122
Query: 144 NFSFAEVSYKASENA-----------EDG----------------DWAAFAFMTLPPLLI 176
NF+ A ++Y A E+ + G DWAAF MTLP + I
Sbjct: 123 NFTSATITYLAQEDGPVVIGSTSAPGQGGILAQREFDRRFSPHFLDWAAFGVMTLPSIGI 182
Query: 177 PFLLWFQSKTKYEKLAGGKTKK 198
P LLW+ SK KY+ KTKK
Sbjct: 183 PLLLWYSSKRKYDT---PKTKK 201
>gi|114560188|ref|XP_001162990.1| PREDICTED: uncharacterized protein LOC457379 isoform 2 [Pan
troglodytes]
gi|397500875|ref|XP_003821130.1| PREDICTED: translocon-associated protein subunit beta [Pan
paniscus]
gi|194374097|dbj|BAG62361.1| unnamed protein product [Homo sapiens]
gi|410301502|gb|JAA29351.1| signal sequence receptor, beta (translocon-associated protein beta)
[Pan troglodytes]
Length = 202
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/142 (40%), Positives = 75/142 (52%), Gaps = 30/142 (21%)
Query: 84 YTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAF 143
Y IYN+G+S A +V +SD SFPPE F I G DR+ P +NV+H V+++P G F
Sbjct: 63 YNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYF 122
Query: 144 NFSFAEVSYKASENA-----------EDG----------------DWAAFAFMTLPPLLI 176
NF+ A ++Y A E+ + G DWAAF MTLP + I
Sbjct: 123 NFTSATITYLAQEDGPVVIGSTSAPGQGGILAQREFDRRFSPHFLDWAAFGVMTLPSIGI 182
Query: 177 PFLLWFQSKTKYEKLAGGKTKK 198
P LLW+ SK KY+ KTKK
Sbjct: 183 PLLLWYSSKRKYDT---PKTKK 201
>gi|350537061|ref|NP_001232510.1| putative signal sequence receptor beta variant 2 precursor
[Taeniopygia guttata]
gi|197127487|gb|ACH43985.1| putative signal sequence receptor beta variant 2 [Taeniopygia
guttata]
Length = 183
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 71/133 (53%), Gaps = 27/133 (20%)
Query: 84 YTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAF 143
Y IYN+G+S A +V +SD SFPPE F I G DR+ P +NV+H V+++P G F
Sbjct: 44 YNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYF 103
Query: 144 NFSFAEVSYKASENA-----------EDG----------------DWAAFAFMTLPPLLI 176
NF+ A ++Y A E A + G DWAAF MTLP + I
Sbjct: 104 NFTSATITYLAQEGAPVVAGFTSAPGQGGILAQRDFDRRFSPHFLDWAAFGVMTLPSIGI 163
Query: 177 PFLLWFQSKTKYE 189
P LLW+ SK KY+
Sbjct: 164 PLLLWYSSKRKYD 176
>gi|432883712|ref|XP_004074342.1| PREDICTED: translocon-associated protein subunit beta-like [Oryzias
latipes]
Length = 189
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 89/197 (45%), Gaps = 53/197 (26%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 61
D+ ++Y +YN+G+S A V +SD SFPPE F I G DR+ P +NV+H V+++P
Sbjct: 45 DLTLQYNLYNVGSSAALEVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPL 104
Query: 62 SYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVID 121
G FNF+ A VSY A E + VVV +S P GQ +
Sbjct: 105 KAGYFNFTSASVSYLAQEGGQ--------------VVVGYTSAP--------GQGGILAQ 142
Query: 122 RVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLIPFLLW 181
R + H V DWAAF MTLP + IP LLW
Sbjct: 143 REFDRRFSPHYV----------------------------DWAAFGVMTLPSIGIPLLLW 174
Query: 182 FQSKTKYEKLAGGKTKK 198
+ SK KY+ K+KK
Sbjct: 175 YSSKRKYDS---SKSKK 188
>gi|50979074|ref|NP_001003269.1| translocon-associated protein subunit beta precursor [Canis lupus
familiaris]
gi|134931|sp|P23438.1|SSRB_CANFA RecName: Full=Translocon-associated protein subunit beta;
Short=TRAP-beta; AltName: Full=Glycoprotein 25H;
Short=gp25H; AltName: Full=Signal sequence receptor
subunit beta; Short=SSR-beta; Flags: Precursor
gi|846|emb|CAA37661.1| glycoprotein 25H [Canis lupus familiaris]
gi|937|emb|CAA37609.1| signal sequence receptor beta subunit [Canis lupus familiaris]
gi|227468|prf||1704250A signal sequence receptor beta
Length = 183
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 71/133 (53%), Gaps = 27/133 (20%)
Query: 84 YTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAF 143
Y IYN+G+S A +V +SD SFPPE F I G DR+ P +NV+H V+++P G F
Sbjct: 44 YNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYF 103
Query: 144 NFSFAEVSYKASENA-----------EDG----------------DWAAFAFMTLPPLLI 176
NF+ A V+Y A E+ + G DWAAF MTLP + I
Sbjct: 104 NFTSATVTYLAQEDGPVVIGFTSAPGQGGILAQREFDRRFSPHFLDWAAFGVMTLPSIGI 163
Query: 177 PFLLWFQSKTKYE 189
P LLW+ SK KY+
Sbjct: 164 PLLLWYSSKRKYD 176
>gi|349802965|gb|AEQ16955.1| putative translocon-associated protein subunit beta [Pipa
carvalhoi]
Length = 167
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 90/188 (47%), Gaps = 50/188 (26%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 61
D+ ++Y IYN+G+S A +V +SD SFPPE F I G DR+ P +NV+H V+++P
Sbjct: 24 DLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPL 83
Query: 62 SYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVID 121
G FNF+ A ++Y A E A+ VVV +S P QGG
Sbjct: 84 KAGYFNFTSATITYVAQEGAQ--------------VVVGYTSAPG-----QGG------- 117
Query: 122 RVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLIPFLLW 181
++ Q + F+ F DWAAF MTLP + IP LLW
Sbjct: 118 -----------ILAQREFDRRFSPHFL-------------DWAAFGVMTLPSIGIPLLLW 153
Query: 182 FQSKTKYE 189
+ SK KY+
Sbjct: 154 YSSKRKYD 161
>gi|197632203|gb|ACH70825.1| signal sequence receptor beta [Salmo salar]
gi|221219480|gb|ACM08401.1| Translocon-associated protein subunit beta precursor [Salmo salar]
gi|221220758|gb|ACM09040.1| Translocon-associated protein subunit beta precursor [Salmo salar]
gi|221220834|gb|ACM09078.1| Translocon-associated protein subunit beta precursor [Salmo salar]
Length = 184
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 84/188 (44%), Gaps = 50/188 (26%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 61
D+ ++Y IYN+G S A V +SD SFPPE F I G DR+ P +NV+H V+++P
Sbjct: 40 DLTLQYNIYNVGTSAALEVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPL 99
Query: 62 SYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVID 121
G FNF+ A VSY A E + VVV +S P GQ +
Sbjct: 100 KAGYFNFTSASVSYLAQEGGQ--------------VVVGYTSAP--------GQGGILAQ 137
Query: 122 RVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLIPFLLW 181
R + H + DWAAF MTLP + IP LLW
Sbjct: 138 REFDRRFSPHYL----------------------------DWAAFGVMTLPSIGIPLLLW 169
Query: 182 FQSKTKYE 189
F SK KY+
Sbjct: 170 FSSKRKYD 177
>gi|52345504|ref|NP_001004800.1| signal sequence receptor, beta precursor [Xenopus (Silurana)
tropicalis]
gi|49522034|gb|AAH74550.1| MGC69435 protein [Xenopus (Silurana) tropicalis]
gi|89272796|emb|CAJ82325.1| signal sequence receptor, beta (translocon-associated protein beta)
[Xenopus (Silurana) tropicalis]
Length = 183
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 88/188 (46%), Gaps = 50/188 (26%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 61
D+ ++Y IYN+G+S A V +SD SFPPE F I G DR+ P +NV+H V+++P
Sbjct: 39 DLTLQYNIYNVGSSAALEVELSDDSFPPEDFGIVSGMLSVKWDRIAPASNVSHTVVLRPL 98
Query: 62 SYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVID 121
G FNF+ A +SY A E + VVV +S P QGG
Sbjct: 99 KAGYFNFTSATISYLAQEGGQ--------------VVVGYTSAPG-----QGG------- 132
Query: 122 RVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLIPFLLW 181
++ Q + F+ F DWAAF MTLP + IP LLW
Sbjct: 133 -----------ILAQREFDRRFSPHFL-------------DWAAFGVMTLPSIGIPLLLW 168
Query: 182 FQSKTKYE 189
F SK KY+
Sbjct: 169 FSSKRKYD 176
>gi|348579807|ref|XP_003475670.1| PREDICTED: translocon-associated protein subunit beta-like [Cavia
porcellus]
Length = 183
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 94/198 (47%), Gaps = 53/198 (26%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 61
D+ ++Y IYN+G+S A +V +SD SFPPE F I G DR+ P +NV+H V+++P
Sbjct: 39 DLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPL 98
Query: 62 SYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVID 121
G FNF+ A ++Y A E+ VV+ +S P QGG
Sbjct: 99 KAGYFNFTSATITYLAQEDGP--------------VVIGSTSAPG-----QGG------- 132
Query: 122 RVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLIPFLLW 181
++ Q + F+ F DWAAF MTLP + IP LLW
Sbjct: 133 -----------ILAQREFDRRFSPHFL-------------DWAAFGVMTLPSIGIPLLLW 168
Query: 182 FQSKTKYEKLAGGKTKKS 199
+ SK KY+ KTKK+
Sbjct: 169 YSSKRKYDT---PKTKKN 183
>gi|403293743|ref|XP_003937871.1| PREDICTED: translocon-associated protein subunit beta [Saimiri
boliviensis boliviensis]
Length = 183
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 94/198 (47%), Gaps = 53/198 (26%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 61
D+ ++Y IYN+G+S A +V +SD SFPPE F I G DR+ P +NV+H V+++P
Sbjct: 39 DLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPL 98
Query: 62 SYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVID 121
G FNF+ A ++Y A E+ VVV +S P QGG
Sbjct: 99 KAGYFNFTSATITYLAQEDGP--------------VVVGSTSAPG-----QGG------- 132
Query: 122 RVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLIPFLLW 181
++ Q + F+ F DWAAF MTLP + IP LLW
Sbjct: 133 -----------ILAQREFDRRFSPHFL-------------DWAAFGVMTLPSIGIPLLLW 168
Query: 182 FQSKTKYEKLAGGKTKKS 199
+ SK KY+ KTKK+
Sbjct: 169 YSSKRKYDT---PKTKKN 183
>gi|335955210|gb|AEH76611.1| signal sequence receptor beta [Epinephelus bruneus]
Length = 185
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 90/198 (45%), Gaps = 53/198 (26%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 61
D+ ++Y IYN+G+S A V +SD SFPPE F I G DR+ P +NV+H V+++P
Sbjct: 41 DLTLQYNIYNVGSSAALEVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPL 100
Query: 62 SYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVID 121
G FNF+ A VSY A E + VVV +S P GQ +
Sbjct: 101 KAGYFNFTSASVSYLAQEGGQ--------------VVVGYTSAP--------GQGGILAQ 138
Query: 122 RVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLIPFLLW 181
R + H + DWAAF MTLP + IP LLW
Sbjct: 139 REFDRRFSPHYL----------------------------DWAAFGVMTLPSIGIPLLLW 170
Query: 182 FQSKTKYEKLAGGKTKKS 199
+ SK KY+ KTKK+
Sbjct: 171 YSSKRKYDS---PKTKKN 185
>gi|348544771|ref|XP_003459854.1| PREDICTED: translocon-associated protein subunit beta-like
[Oreochromis niloticus]
Length = 185
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 69/133 (51%), Gaps = 27/133 (20%)
Query: 84 YTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAF 143
Y+IYN+G+S A V +SD SFPPE F I G DR+ P +NV+H V+++P G F
Sbjct: 46 YSIYNVGSSAALEVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYF 105
Query: 144 NFSFAEVSYKASENAE----------DG-----------------DWAAFAFMTLPPLLI 176
NF+ A VSY E + G DWAAF MTLP + I
Sbjct: 106 NFTSATVSYLVQEGGQVVVGYTSAPGQGGILAQREFDRRFSPHYLDWAAFGVMTLPSIGI 165
Query: 177 PFLLWFQSKTKYE 189
P LLW+ SK KY+
Sbjct: 166 PLLLWYSSKRKYD 178
>gi|383872430|ref|NP_001244550.1| translocon-associated protein subunit beta precursor [Macaca
mulatta]
gi|355558550|gb|EHH15330.1| hypothetical protein EGK_01404 [Macaca mulatta]
gi|355745729|gb|EHH50354.1| hypothetical protein EGM_01170 [Macaca fascicularis]
gi|380815908|gb|AFE79828.1| translocon-associated protein subunit beta precursor [Macaca
mulatta]
Length = 183
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 94/198 (47%), Gaps = 53/198 (26%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 61
D+ ++Y IYN+G+S A +V +SD SFPPE F I G DR+ P +NV+H V+++P
Sbjct: 39 DLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPL 98
Query: 62 SYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVID 121
G FNF+ A ++Y A E+ VV+ +S P QGG
Sbjct: 99 KAGYFNFTSATITYLAQEDGP--------------VVIGSTSAPG-----QGG------- 132
Query: 122 RVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLIPFLLW 181
++ Q + F+ F DWAAF MTLP + IP LLW
Sbjct: 133 -----------ILAQREFDRRFSPHFL-------------DWAAFGVMTLPSIGIPLLLW 168
Query: 182 FQSKTKYEKLAGGKTKKS 199
+ SK KY+ KTKK+
Sbjct: 169 YSSKRKYDT---PKTKKN 183
>gi|296229140|ref|XP_002760044.1| PREDICTED: translocon-associated protein subunit beta [Callithrix
jacchus]
Length = 183
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 94/198 (47%), Gaps = 53/198 (26%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 61
D+ ++Y IYN+G+S A +V +SD SFPPE F I G DR+ P +NV+H V+++P
Sbjct: 39 DLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLSVKWDRIAPASNVSHTVVLRPL 98
Query: 62 SYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVID 121
G FNF+ A ++Y A E+ VV+ +S P QGG
Sbjct: 99 KAGYFNFTSATITYLAQEDGP--------------VVIGSTSAPG-----QGG------- 132
Query: 122 RVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLIPFLLW 181
++ Q + F+ F DWAAF MTLP + IP LLW
Sbjct: 133 -----------ILAQREFDRRFSPHFL-------------DWAAFGVMTLPSIGIPLLLW 168
Query: 182 FQSKTKYEKLAGGKTKKS 199
+ SK KY+ KTKK+
Sbjct: 169 YSSKRKYDT---PKTKKN 183
>gi|4507239|ref|NP_003136.1| translocon-associated protein subunit beta precursor [Homo sapiens]
gi|332220694|ref|XP_003259489.1| PREDICTED: translocon-associated protein subunit beta isoform 1
[Nomascus leucogenys]
gi|410033890|ref|XP_003949648.1| PREDICTED: uncharacterized protein LOC457379 [Pan troglodytes]
gi|410033892|ref|XP_003949649.1| PREDICTED: uncharacterized protein LOC457379 [Pan troglodytes]
gi|441635361|ref|XP_004089904.1| PREDICTED: translocon-associated protein subunit beta isoform 2
[Nomascus leucogenys]
gi|441635364|ref|XP_004089905.1| PREDICTED: translocon-associated protein subunit beta isoform 3
[Nomascus leucogenys]
gi|1174451|sp|P43308.1|SSRB_HUMAN RecName: Full=Translocon-associated protein subunit beta;
Short=TRAP-beta; AltName: Full=Signal sequence receptor
subunit beta; Short=SSR-beta; Flags: Precursor
gi|452757|emb|CAA52207.1| translocon-associated protein [Homo sapiens]
gi|1736880|dbj|BAA07206.1| beta-signal sequence receptor [Homo sapiens]
gi|37955221|gb|AAP20059.1| HSD25 [Homo sapiens]
gi|48146063|emb|CAG33254.1| SSR2 [Homo sapiens]
gi|119573395|gb|EAW53010.1| signal sequence receptor, beta (translocon-associated protein
beta), isoform CRA_a [Homo sapiens]
gi|119573396|gb|EAW53011.1| signal sequence receptor, beta (translocon-associated protein
beta), isoform CRA_a [Homo sapiens]
gi|127796214|gb|AAH00341.2| Signal sequence receptor, beta (translocon-associated protein beta)
[Homo sapiens]
gi|189054049|dbj|BAG36556.1| unnamed protein product [Homo sapiens]
Length = 183
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 94/198 (47%), Gaps = 53/198 (26%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 61
D+ ++Y IYN+G+S A +V +SD SFPPE F I G DR+ P +NV+H V+++P
Sbjct: 39 DLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPL 98
Query: 62 SYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVID 121
G FNF+ A ++Y A E+ VV+ +S P QGG
Sbjct: 99 KAGYFNFTSATITYLAQEDGP--------------VVIGSTSAPG-----QGG------- 132
Query: 122 RVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLIPFLLW 181
++ Q + F+ F DWAAF MTLP + IP LLW
Sbjct: 133 -----------ILAQREFDRRFSPHFL-------------DWAAFGVMTLPSIGIPLLLW 168
Query: 182 FQSKTKYEKLAGGKTKKS 199
+ SK KY+ KTKK+
Sbjct: 169 YSSKRKYDT---PKTKKN 183
>gi|157823735|ref|NP_001099912.1| translocon-associated protein subunit beta precursor [Rattus
norvegicus]
gi|149048121|gb|EDM00697.1| signal sequence receptor, beta (predicted), isoform CRA_b [Rattus
norvegicus]
gi|197245931|gb|AAI68754.1| Signal sequence receptor, beta [Rattus norvegicus]
Length = 183
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 89/188 (47%), Gaps = 50/188 (26%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 61
D+ ++Y IYN+G+S A +V +SD SFPPE F I G DR+ P +NV+H V+++P
Sbjct: 39 DLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPL 98
Query: 62 SYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVID 121
G FNF+ A ++Y A E+ VV+ +S P QGG
Sbjct: 99 KAGYFNFTSATITYLAQEDGP--------------VVIGSTSAPG-----QGG------- 132
Query: 122 RVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLIPFLLW 181
++ Q + F+ F DWAAF MTLP + IP LLW
Sbjct: 133 -----------ILAQREFDRRFSPHFL-------------DWAAFGVMTLPSIGIPLLLW 168
Query: 182 FQSKTKYE 189
+ SK KY+
Sbjct: 169 YSSKRKYD 176
>gi|13384850|ref|NP_079724.1| translocon-associated protein subunit beta precursor [Mus musculus]
gi|71162391|sp|Q9CPW5.1|SSRB_MOUSE RecName: Full=Translocon-associated protein subunit beta;
Short=TRAP-beta; AltName: Full=Signal sequence receptor
subunit beta; Short=SSR-beta; Flags: Precursor
gi|12837820|dbj|BAB23962.1| unnamed protein product [Mus musculus]
gi|12846101|dbj|BAB27030.1| unnamed protein product [Mus musculus]
gi|26341266|dbj|BAC34295.1| unnamed protein product [Mus musculus]
gi|26351151|dbj|BAC39212.1| unnamed protein product [Mus musculus]
gi|148683322|gb|EDL15269.1| signal sequence receptor, beta, isoform CRA_d [Mus musculus]
Length = 183
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 89/188 (47%), Gaps = 50/188 (26%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 61
D+ ++Y IYN+G+S A +V +SD SFPPE F I G DR+ P +NV+H V+++P
Sbjct: 39 DLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPL 98
Query: 62 SYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVID 121
G FNF+ A ++Y A E+ VV+ +S P QGG
Sbjct: 99 KAGYFNFTSATITYLAQEDGP--------------VVIGSTSAPG-----QGG------- 132
Query: 122 RVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLIPFLLW 181
++ Q + F+ F DWAAF MTLP + IP LLW
Sbjct: 133 -----------ILAQREFDRRFSPHFL-------------DWAAFGVMTLPSIGIPLLLW 168
Query: 182 FQSKTKYE 189
+ SK KY+
Sbjct: 169 YSSKRKYD 176
>gi|57529546|ref|NP_001006561.1| translocon-associated protein subunit beta precursor [Gallus
gallus]
gi|53128131|emb|CAG31274.1| hypothetical protein RCJMB04_4j5 [Gallus gallus]
Length = 183
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 94/198 (47%), Gaps = 53/198 (26%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 61
D+ ++Y IYN+G+S A +V +SD SFPPE F I G DR+ P +NV+H V+++P
Sbjct: 39 DLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPL 98
Query: 62 SYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVID 121
G FNF+ A ++Y A E + VVV +S P QGG
Sbjct: 99 KAGYFNFTSATITYLAQEGGQ--------------VVVGFTSAPG-----QGG------- 132
Query: 122 RVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLIPFLLW 181
++ Q + F+ F DWAAF MTLP + IP LLW
Sbjct: 133 -----------ILAQREFDRRFSPHFL-------------DWAAFGVMTLPSIGIPLLLW 168
Query: 182 FQSKTKYEKLAGGKTKKS 199
+ SK KY+ KTKK+
Sbjct: 169 YSSKRKYDT---PKTKKN 183
>gi|148683321|gb|EDL15268.1| signal sequence receptor, beta, isoform CRA_c [Mus musculus]
Length = 234
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 89/188 (47%), Gaps = 50/188 (26%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 61
D+ ++Y IYN+G+S A +V +SD SFPPE F I G DR+ P +NV+H V+++P
Sbjct: 90 DLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPL 149
Query: 62 SYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVID 121
G FNF+ A ++Y A E+ VV+ +S P QGG
Sbjct: 150 KAGYFNFTSATITYLAQEDGP--------------VVIGSTSAPG-----QGG------- 183
Query: 122 RVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLIPFLLW 181
++ Q + F+ F DWAAF MTLP + IP LLW
Sbjct: 184 -----------ILAQREFDRRFSPHFL-------------DWAAFGVMTLPSIGIPLLLW 219
Query: 182 FQSKTKYE 189
+ SK KY+
Sbjct: 220 YSSKRKYD 227
>gi|221219122|gb|ACM08222.1| Translocon-associated protein subunit beta precursor [Salmo salar]
Length = 184
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 83/187 (44%), Gaps = 50/187 (26%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 61
D+ ++Y IYN+G S A V +SD SFPPE F I G DR+ P +NV+H V+++P
Sbjct: 40 DLTLQYNIYNVGTSAALEVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPL 99
Query: 62 SYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVID 121
G FNF+ A VSY A E +VVV +S P GQ +
Sbjct: 100 KAGYFNFTSASVSYLAQEGG--------------HVVVGYTSAP--------GQGGILAQ 137
Query: 122 RVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLIPFLLW 181
R + H + DWAAF MTLP + IP LLW
Sbjct: 138 RGFDRRFSPHYL----------------------------DWAAFGVMTLPSIGIPLLLW 169
Query: 182 FQSKTKY 188
F SK KY
Sbjct: 170 FSSKRKY 176
>gi|326933506|ref|XP_003212844.1| PREDICTED: translocon-associated protein subunit beta-like
[Meleagris gallopavo]
Length = 183
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 94/198 (47%), Gaps = 53/198 (26%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 61
D+ ++Y IYN+G+S A +V +SD SFPPE F I G DR+ P +NV+H V+++P
Sbjct: 39 DLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPL 98
Query: 62 SYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVID 121
G FNF+ A ++Y A E + VVV +S P QGG
Sbjct: 99 KAGYFNFTSATITYLAQEGGQ--------------VVVGFTSAPG-----QGG------- 132
Query: 122 RVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLIPFLLW 181
++ Q + F+ F DWAAF MTLP + IP LLW
Sbjct: 133 -----------ILAQREFDRRFSPHFL-------------DWAAFGVMTLPSIGIPLLLW 168
Query: 182 FQSKTKYEKLAGGKTKKS 199
+ SK KY+ KTKK+
Sbjct: 169 YSSKRKYDT---PKTKKN 183
>gi|221221416|gb|ACM09369.1| Translocon-associated protein subunit beta precursor [Salmo salar]
Length = 184
Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 83/187 (44%), Gaps = 50/187 (26%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 61
D+ ++Y IYN+G S A V +SD SFPPE F I G DR+ P +NV+H V+++P
Sbjct: 40 DLTLQYNIYNVGTSAALEVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPL 99
Query: 62 SYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVID 121
G FNF+ A VSY A E +VVV +S P GQ +
Sbjct: 100 KAGYFNFTSASVSYLAQEGG--------------HVVVGYTSAP--------GQGGILAQ 137
Query: 122 RVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLIPFLLW 181
R + H + DWAAF MTLP + IP LLW
Sbjct: 138 REFDRRFSPHYL----------------------------DWAAFGVMTLPSIGIPLLLW 169
Query: 182 FQSKTKY 188
F SK KY
Sbjct: 170 FSSKRKY 176
>gi|410986764|ref|XP_003999679.1| PREDICTED: translocon-associated protein subunit beta [Felis catus]
Length = 183
Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 94/198 (47%), Gaps = 53/198 (26%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 61
D+ ++Y IYN+G+S A +V +SD SFPPE F I G DR+ P +NV+H V+++P
Sbjct: 39 DLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPL 98
Query: 62 SYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVID 121
G FNF+ A V+Y A E+ VVV +S P QGG
Sbjct: 99 KAGYFNFTSATVTYLAQEDGP--------------VVVGFTSAPG-----QGG------- 132
Query: 122 RVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLIPFLLW 181
++ Q + F+ F DWAAF MTLP + IP LLW
Sbjct: 133 -----------ILAQREFDRRFSPHFL-------------DWAAFGVMTLPSIGIPLLLW 168
Query: 182 FQSKTKYEKLAGGKTKKS 199
+ SK KY+ KTKK+
Sbjct: 169 YSSKRKYDT---PKTKKN 183
>gi|351696648|gb|EHA99566.1| Translocon-associated protein subunit beta [Heterocephalus glaber]
Length = 186
Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 89/188 (47%), Gaps = 50/188 (26%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 61
D+ ++Y IYN+G+S A +V +SD SFPPE F I G DR+ P +NV+H V+++P
Sbjct: 42 DLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPL 101
Query: 62 SYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVID 121
G FNF+ A ++Y A E+ VV+ +S P QGG
Sbjct: 102 KAGYFNFTSATITYLAQEDGP--------------VVIGSTSAPG-----QGG------- 135
Query: 122 RVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLIPFLLW 181
++ Q + F+ F DWAAF MTLP + IP LLW
Sbjct: 136 -----------ILAQREFDRRFSPHFL-------------DWAAFGVMTLPSIGIPLLLW 171
Query: 182 FQSKTKYE 189
+ SK KY+
Sbjct: 172 YSSKRKYD 179
>gi|410911542|ref|XP_003969249.1| PREDICTED: translocon-associated protein subunit beta-like
[Takifugu rubripes]
Length = 185
Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 93/198 (46%), Gaps = 53/198 (26%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 61
D+ ++Y IYN+G+S A V +SD SFPPE F I G +R+ P +NV+H V+++P
Sbjct: 41 DLTLQYNIYNVGSSAALEVELSDDSFPPEDFGIVSGMLNVKWERIAPASNVSHTVVLRPL 100
Query: 62 SYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVID 121
G FNF+ A VSY A E E VVV +S P QGG
Sbjct: 101 KAGYFNFTSASVSYVAQEGGE--------------VVVGFTSAPG-----QGG------- 134
Query: 122 RVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLIPFLLW 181
++ Q + F+ + DWAAF MTLP + IP LLW
Sbjct: 135 -----------ILAQREFDRRFSPHYL-------------DWAAFGVMTLPSIGIPLLLW 170
Query: 182 FQSKTKYEKLAGGKTKKS 199
+ SK KY+ KTKK+
Sbjct: 171 YSSKRKYDS---PKTKKN 185
>gi|301783127|ref|XP_002926979.1| PREDICTED: translocon-associated protein subunit beta-like isoform
1 [Ailuropoda melanoleuca]
gi|301783129|ref|XP_002926980.1| PREDICTED: translocon-associated protein subunit beta-like isoform
2 [Ailuropoda melanoleuca]
Length = 183
Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 94/198 (47%), Gaps = 53/198 (26%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 61
D+ ++Y IYN+G+S A +V +SD SFPPE F I G DR+ P +NV+H V+++P
Sbjct: 39 DLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPL 98
Query: 62 SYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVID 121
G FNF+ A V+Y A E+ VV+ +S P QGG
Sbjct: 99 KAGYFNFTSATVTYLAQEDGP--------------VVIGFTSAPG-----QGG------- 132
Query: 122 RVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLIPFLLW 181
++ Q + F+ F DWAAF MTLP + IP LLW
Sbjct: 133 -----------ILAQREFDRRFSPHFL-------------DWAAFGVMTLPSIGIPLLLW 168
Query: 182 FQSKTKYEKLAGGKTKKS 199
+ SK KY+ KTKK+
Sbjct: 169 YSSKRKYDT---PKTKKN 183
>gi|354481564|ref|XP_003502971.1| PREDICTED: translocon-associated protein subunit beta-like
[Cricetulus griseus]
gi|344250969|gb|EGW07073.1| Translocon-associated protein subunit beta [Cricetulus griseus]
Length = 183
Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 89/188 (47%), Gaps = 50/188 (26%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 61
D+ ++Y IYN+G+S A +V +SD SFPPE F I G DR+ P +NV+H V+++P
Sbjct: 39 DLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPL 98
Query: 62 SYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVID 121
G FNF+ A ++Y A E+ VV+ +S P QGG
Sbjct: 99 KAGYFNFTSATITYLAQEDGP--------------VVIGSTSAPG-----QGG------- 132
Query: 122 RVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLIPFLLW 181
++ Q + F+ F DWAAF MTLP + IP LLW
Sbjct: 133 -----------ILAQREFDRRFSPHFL-------------DWAAFGVMTLPSIGIPLLLW 168
Query: 182 FQSKTKYE 189
+ SK KY+
Sbjct: 169 YSSKRKYD 176
>gi|12860639|dbj|BAB32009.1| unnamed protein product [Mus musculus]
Length = 183
Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 87/188 (46%), Gaps = 50/188 (26%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 61
D+ ++Y IYN+G+S A +V +SD SFPPE F I G DR+ P +NV+H V+++P
Sbjct: 39 DLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPL 98
Query: 62 SYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVID 121
G FNF+ A ++Y A E+ VV+ +S P GQ + +
Sbjct: 99 KAGYFNFTSATITYLAQEDGP--------------VVIGSTSAP--------GQGEILAQ 136
Query: 122 RVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLIPFLLW 181
R + H + DWAAF MTLP + IP LLW
Sbjct: 137 REFDRRFSPHFL----------------------------DWAAFGVMTLPSIGIPLLLW 168
Query: 182 FQSKTKYE 189
+ SK KY+
Sbjct: 169 YSSKRKYD 176
>gi|281342888|gb|EFB18472.1| hypothetical protein PANDA_016681 [Ailuropoda melanoleuca]
Length = 185
Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 94/198 (47%), Gaps = 53/198 (26%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 61
D+ ++Y IYN+G+S A +V +SD SFPPE F I G DR+ P +NV+H V+++P
Sbjct: 41 DLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPL 100
Query: 62 SYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVID 121
G FNF+ A V+Y A E+ VV+ +S P QGG
Sbjct: 101 KAGYFNFTSATVTYLAQEDGP--------------VVIGFTSAPG-----QGG------- 134
Query: 122 RVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLIPFLLW 181
++ Q + F+ F DWAAF MTLP + IP LLW
Sbjct: 135 -----------ILAQREFDRRFSPHFL-------------DWAAFGVMTLPSIGIPLLLW 170
Query: 182 FQSKTKYEKLAGGKTKKS 199
+ SK KY+ KTKK+
Sbjct: 171 YSSKRKYDT---PKTKKN 185
>gi|291397796|ref|XP_002715370.1| PREDICTED: signal sequence receptor, beta-like [Oryctolagus
cuniculus]
Length = 148
Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 93/198 (46%), Gaps = 53/198 (26%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 61
D+ ++Y IYN+G+S A V +SD SFPPE F I G DR+ P +NV+H V+++P
Sbjct: 4 DLTLQYNIYNVGSSAALEVELSDDSFPPEDFGIVSGMLSVKWDRIAPASNVSHTVVLRPL 63
Query: 62 SYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVID 121
G FNF+ A ++Y A E+ VV+ +S P QGG
Sbjct: 64 KAGYFNFTSATITYLAQEDGP--------------VVIGSTSAPG-----QGG------- 97
Query: 122 RVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLIPFLLW 181
++ Q + F+ F DWAAF MTLP + IP LLW
Sbjct: 98 -----------ILAQREFDRRFSPHFL-------------DWAAFGVMTLPSIGIPLLLW 133
Query: 182 FQSKTKYEKLAGGKTKKS 199
+ SK KY+ KTKK+
Sbjct: 134 YSSKRKYDT---PKTKKN 148
>gi|239937486|ref|NP_001154128.1| Translocon-associated protein subunit beta precursor [Oncorhynchus
mykiss]
gi|225704242|gb|ACO07967.1| Translocon-associated protein subunit beta precursor [Oncorhynchus
mykiss]
Length = 184
Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 84/188 (44%), Gaps = 50/188 (26%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 61
D+ ++Y IYN+G S A V +SD SFPPE F I G DR+ P +NV+H V+++P
Sbjct: 40 DLTLQYNIYNVGTSAALEVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPL 99
Query: 62 SYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVID 121
G FNF+ A VSY A E + VVV +S P GQ +
Sbjct: 100 KAGYFNFTSASVSYLAQEGGQ--------------VVVGYTSTP--------GQGGILAQ 137
Query: 122 RVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLIPFLLW 181
R + H + DWAAF MTLP + IP LLW
Sbjct: 138 REFDRRFSPHYL----------------------------DWAAFGVMTLPSIGIPLLLW 169
Query: 182 FQSKTKYE 189
F +K KY+
Sbjct: 170 FSNKRKYD 177
>gi|16307352|gb|AAH10214.1| Signal sequence receptor, beta [Mus musculus]
Length = 183
Score = 99.4 bits (246), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 89/188 (47%), Gaps = 50/188 (26%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 61
D+ ++Y IYN+G+S A +V +SD SFPPE F I G DR+ P +NV+H V+++P
Sbjct: 39 DLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPL 98
Query: 62 SYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVID 121
G FNF+ A ++Y A E+ VV+ +S P QGG
Sbjct: 99 KAGYFNFTSATITYLAQEDGP--------------VVIGSTSAPG-----QGG------- 132
Query: 122 RVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLIPFLLW 181
++ Q + F+ F DWAAF MTLP + +P LLW
Sbjct: 133 -----------ILAQREFDRRFSPHFL-------------DWAAFGVMTLPSIGMPLLLW 168
Query: 182 FQSKTKYE 189
+ SK KY+
Sbjct: 169 YSSKRKYD 176
>gi|149751577|ref|XP_001499646.1| PREDICTED: translocon-associated protein subunit beta-like [Equus
caballus]
Length = 184
Score = 99.4 bits (246), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 94/198 (47%), Gaps = 53/198 (26%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 61
D+ ++Y IYN+G+S A +V +SD SFPPE F I G DR+ P +NV+H V+++P
Sbjct: 40 DLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPL 99
Query: 62 SYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVID 121
G FNF+ A ++Y A E+ VV+ +S P QGG
Sbjct: 100 KAGYFNFTSATITYLAQEDGP--------------VVIGFTSAPG-----QGG------- 133
Query: 122 RVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLIPFLLW 181
++ Q + F+ F DWAAF MTLP + IP LLW
Sbjct: 134 -----------ILAQREFDRRFSPHFL-------------DWAAFGVMTLPSIGIPLLLW 169
Query: 182 FQSKTKYEKLAGGKTKKS 199
+ SK KY+ KTKK+
Sbjct: 170 YSSKRKYDT---PKTKKN 184
>gi|335772970|gb|AEH58235.1| translocon-associated protein subunit bet-like protein [Equus
caballus]
Length = 183
Score = 99.4 bits (246), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 94/198 (47%), Gaps = 53/198 (26%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 61
D+ ++Y IYN+G+S A +V +SD SFPPE F I G DR+ P +NV+H V+++P
Sbjct: 39 DLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPL 98
Query: 62 SYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVID 121
G FNF+ A ++Y A E+ VV+ +S P QGG
Sbjct: 99 KAGYFNFTSATITYLAQEDGP--------------VVIGFTSAPG-----QGG------- 132
Query: 122 RVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLIPFLLW 181
++ Q + F+ F DWAAF MTLP + IP LLW
Sbjct: 133 -----------ILAQREFDRRFSPHFL-------------DWAAFGVMTLPSIGIPLLLW 168
Query: 182 FQSKTKYEKLAGGKTKKS 199
+ SK KY+ KTKK+
Sbjct: 169 YSSKRKYDT---PKTKKN 183
>gi|344286884|ref|XP_003415186.1| PREDICTED: translocon-associated protein subunit beta-like
[Loxodonta africana]
Length = 186
Score = 99.4 bits (246), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 94/198 (47%), Gaps = 53/198 (26%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 61
D+ ++Y IYN+G+S A +V +SD SFPPE F I G DR+ P +NV+H V+++P
Sbjct: 42 DLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPL 101
Query: 62 SYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVID 121
G FNF+ A ++Y A E+ VV+ +S P QGG
Sbjct: 102 KAGYFNFTSATITYLAQEDGP--------------VVIGFTSAPG-----QGG------- 135
Query: 122 RVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLIPFLLW 181
++ Q + F+ F DWAAF MTLP + IP LLW
Sbjct: 136 -----------ILAQREFDRRFSPHFL-------------DWAAFGVMTLPSIGIPLLLW 171
Query: 182 FQSKTKYEKLAGGKTKKS 199
+ SK KY+ KTKK+
Sbjct: 172 YSSKRKYDT---PKTKKN 186
>gi|194036033|ref|XP_001928505.1| PREDICTED: translocon-associated protein subunit beta isoform 1
[Sus scrofa]
gi|194036035|ref|XP_001928508.1| PREDICTED: translocon-associated protein subunit beta isoform 2
[Sus scrofa]
Length = 183
Score = 99.4 bits (246), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 94/198 (47%), Gaps = 53/198 (26%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 61
D+ ++Y IYN+G+S A +V +SD SFPPE F I G DR+ P +NV+H V+++P
Sbjct: 39 DLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPL 98
Query: 62 SYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVID 121
G FNF+ A ++Y A E+ VV+ +S P QGG
Sbjct: 99 KAGYFNFTSATITYLAQEDGP--------------VVIGFTSAPG-----QGG------- 132
Query: 122 RVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLIPFLLW 181
++ Q + F+ F DWAAF MTLP + IP LLW
Sbjct: 133 -----------ILAQREFDRRFSPHFL-------------DWAAFGVMTLPSIGIPLLLW 168
Query: 182 FQSKTKYEKLAGGKTKKS 199
+ SK KY+ KTKK+
Sbjct: 169 YSSKRKYDT---PKTKKN 183
>gi|225715560|gb|ACO13626.1| Translocon-associated protein subunit beta precursor [Esox lucius]
Length = 184
Score = 99.0 bits (245), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 84/188 (44%), Gaps = 50/188 (26%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 61
D+ ++Y IYN+G+S A V +SD S PPE F I G DR+ P +NV+H V+++P
Sbjct: 40 DLTLQYNIYNVGSSAALEVELSDDSSPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPL 99
Query: 62 SYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVID 121
G FNF+ A VSY A E + VVV +S P GQ +
Sbjct: 100 KAGYFNFTSASVSYLAQEGGQ--------------VVVGYTSAP--------GQGGILAQ 137
Query: 122 RVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLIPFLLW 181
R + H + DWAAF MTLP + IP LLW
Sbjct: 138 REFDRRFSPHYL----------------------------DWAAFGVMTLPSIGIPLLLW 169
Query: 182 FQSKTKYE 189
F SK KY+
Sbjct: 170 FSSKRKYD 177
>gi|426216808|ref|XP_004002649.1| PREDICTED: translocon-associated protein subunit beta isoform 1
[Ovis aries]
Length = 186
Score = 99.0 bits (245), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 94/198 (47%), Gaps = 53/198 (26%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 61
D+ ++Y IYN+G+S A +V +SD SFPPE F I G DR+ P +NV+H V+++P
Sbjct: 42 DLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPL 101
Query: 62 SYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVID 121
G FNF+ A V+Y A E+ VV+ +S P QGG
Sbjct: 102 KAGYFNFTSATVTYLAQEDGP--------------VVIGFTSAPG-----QGG------- 135
Query: 122 RVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLIPFLLW 181
++ Q + F+ F DWAAF MTLP + +P LLW
Sbjct: 136 -----------ILAQREFDRRFSPHFL-------------DWAAFGVMTLPSIGVPLLLW 171
Query: 182 FQSKTKYEKLAGGKTKKS 199
+ SK KY+ KTKK+
Sbjct: 172 YSSKRKYDT---PKTKKN 186
>gi|62896759|dbj|BAD96320.1| signal sequence receptor, beta precursor variant [Homo sapiens]
Length = 183
Score = 99.0 bits (245), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 93/198 (46%), Gaps = 53/198 (26%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 61
D+ ++Y YN+G+S A +V +SD SFPPE F I G DR+ P +NV+H V+++P
Sbjct: 39 DLTLQYNTYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPL 98
Query: 62 SYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVID 121
G FNF+ A ++Y A E+ VV+ +S P QGG
Sbjct: 99 KAGYFNFTSATITYLAQEDGP--------------VVIGSTSAPG-----QGG------- 132
Query: 122 RVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLIPFLLW 181
++ Q + F+ F DWAAF MTLP + IP LLW
Sbjct: 133 -----------ILAQREFDRRFSPHFL-------------DWAAFGVMTLPSIGIPLLLW 168
Query: 182 FQSKTKYEKLAGGKTKKS 199
+ SK KY+ KTKK+
Sbjct: 169 YSSKRKYDT---PKTKKN 183
>gi|391328770|ref|XP_003738857.1| PREDICTED: translocon-associated protein subunit beta-like isoform
1 [Metaseiulus occidentalis]
gi|391328772|ref|XP_003738858.1| PREDICTED: translocon-associated protein subunit beta-like isoform
2 [Metaseiulus occidentalis]
Length = 187
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 78/143 (54%), Gaps = 28/143 (19%)
Query: 83 DYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGA 142
DY ++N+G++ A NV ++D +FPP F++ G +++ P NV+H ++V+P YG
Sbjct: 45 DYELFNVGDAPALNVKLTDRTFPPSDFDVVSGSLDAKFEKILPGANVSHSLVVRPNKYGL 104
Query: 143 FNFSFAEVSYKASENAEDG----------------------------DWAAFAFMTLPPL 174
FNF+ AEV+Y+ SE++ + DWA FA +++P +
Sbjct: 105 FNFTSAEVTYRISEDSTEERISFTTEPGQGGIMPEVEYERRFSPHYLDWAVFALVSMPSI 164
Query: 175 LIPFLLWFQSKTKYEKLAGGKTK 197
L+P+ L+ SK++YE L K K
Sbjct: 165 LLPYFLYHSSKSRYEGLVKSKAK 187
>gi|62751819|ref|NP_001015533.1| translocon-associated protein subunit beta precursor [Bos taurus]
gi|426216810|ref|XP_004002650.1| PREDICTED: translocon-associated protein subunit beta isoform 2
[Ovis aries]
gi|83308967|sp|Q5E9E4.1|SSRB_BOVIN RecName: Full=Translocon-associated protein subunit beta;
Short=TRAP-beta; AltName: Full=Signal sequence receptor
subunit beta; Short=SSR-beta; Flags: Precursor
gi|59858317|gb|AAX08993.1| signal sequence receptor, beta precursor [Bos taurus]
gi|74267987|gb|AAI02098.1| SSR2 protein [Bos taurus]
Length = 183
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 94/198 (47%), Gaps = 53/198 (26%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 61
D+ ++Y IYN+G+S A +V +SD SFPPE F I G DR+ P +NV+H V+++P
Sbjct: 39 DLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPL 98
Query: 62 SYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVID 121
G FNF+ A V+Y A E+ VV+ +S P QGG
Sbjct: 99 KAGYFNFTSATVTYLAQEDGP--------------VVIGFTSAPG-----QGG------- 132
Query: 122 RVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLIPFLLW 181
++ Q + F+ F DWAAF MTLP + +P LLW
Sbjct: 133 -----------ILAQREFDRRFSPHFL-------------DWAAFGVMTLPSIGVPLLLW 168
Query: 182 FQSKTKYEKLAGGKTKKS 199
+ SK KY+ KTKK+
Sbjct: 169 YSSKRKYDT---PKTKKN 183
>gi|126307640|ref|XP_001367144.1| PREDICTED: translocon-associated protein subunit beta-like isoform
1 [Monodelphis domestica]
gi|334322542|ref|XP_003340267.1| PREDICTED: translocon-associated protein subunit beta-like isoform
2 [Monodelphis domestica]
gi|334322544|ref|XP_003340268.1| PREDICTED: translocon-associated protein subunit beta-like isoform
3 [Monodelphis domestica]
Length = 183
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 93/198 (46%), Gaps = 53/198 (26%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 61
D+ ++Y IYN+G+S A +V +SD SFPPE F I G DR+ P +NV+H V+++P
Sbjct: 39 DLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPL 98
Query: 62 SYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVID 121
G FNF+ A ++Y A E VVV +S P QGG
Sbjct: 99 KAGYFNFTSATITYLAQEEGP--------------VVVGFTSAPG-----QGG------- 132
Query: 122 RVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLIPFLLW 181
++ Q + F+ F DWAAF MTLP + IP LLW
Sbjct: 133 -----------ILAQREFDRRFSPHFL-------------DWAAFGVMTLPSIGIPLLLW 168
Query: 182 FQSKTKYEKLAGGKTKKS 199
+ SK KY+ KTKK+
Sbjct: 169 YSSKRKYDT---PKTKKN 183
>gi|417408486|gb|JAA50793.1| Putative translocon-associated protein subunit beta isoform 2,
partial [Desmodus rotundus]
Length = 189
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 94/198 (47%), Gaps = 53/198 (26%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 61
D+ ++Y IYN+G+S A +V +SD SFPPE F I G DR+ P +NV+H V+++P
Sbjct: 45 DLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPL 104
Query: 62 SYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVID 121
G FNF+ A V+Y A E+ VVV +S P QGG
Sbjct: 105 KAGYFNFTSATVTYLAQEDGP--------------VVVGFTSAPG-----QGG------- 138
Query: 122 RVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLIPFLLW 181
++ Q + F+ F DWAAF MTLP + +P LLW
Sbjct: 139 -----------ILAQREFDRRFSPHFL-------------DWAAFGVMTLPSIGVPLLLW 174
Query: 182 FQSKTKYEKLAGGKTKKS 199
+ SK KY+ KTKK+
Sbjct: 175 YSSKRKYDT---PKTKKN 189
>gi|431892319|gb|ELK02759.1| Translocon-associated protein subunit beta [Pteropus alecto]
Length = 183
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 87/188 (46%), Gaps = 50/188 (26%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 61
D+ ++Y IYN+G+S A +V +SD SFPPE F I G DR+ P NV+H V+++P
Sbjct: 39 DLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPAGNVSHTVVLRPL 98
Query: 62 SYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVID 121
G FNF+ A V+Y A E VV+ +S P QGG
Sbjct: 99 KAGHFNFTSAAVTYLAREGGP--------------VVIGFTSAPG-----QGG------- 132
Query: 122 RVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLIPFLLW 181
++ Q + F+ F DWAAF MTLP + IP LLW
Sbjct: 133 -----------ILAQREFDRRFSPHFL-------------DWAAFGVMTLPSIGIPLLLW 168
Query: 182 FQSKTKYE 189
+ SK KY+
Sbjct: 169 YSSKRKYD 176
>gi|395532146|ref|XP_003768132.1| PREDICTED: translocon-associated protein subunit beta isoform 1
[Sarcophilus harrisii]
gi|395532148|ref|XP_003768133.1| PREDICTED: translocon-associated protein subunit beta isoform 2
[Sarcophilus harrisii]
gi|395532150|ref|XP_003768134.1| PREDICTED: translocon-associated protein subunit beta isoform 3
[Sarcophilus harrisii]
gi|395532152|ref|XP_003768135.1| PREDICTED: translocon-associated protein subunit beta isoform 4
[Sarcophilus harrisii]
Length = 183
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 93/198 (46%), Gaps = 53/198 (26%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 61
D+ ++Y IYN+G+S A +V +SD SFPPE F I G DR+ P +NV+H V+++P
Sbjct: 39 DLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPL 98
Query: 62 SYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVID 121
G FNF+ A ++Y A E VVV +S P QGG
Sbjct: 99 KAGYFNFTSATITYLAQEEGP--------------VVVGFTSAPG-----QGG------- 132
Query: 122 RVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLIPFLLW 181
++ Q + F+ F DWAAF MTLP + IP LLW
Sbjct: 133 -----------ILAQREFDRRFSPHFL-------------DWAAFGVMTLPSIGIPLLLW 168
Query: 182 FQSKTKYEKLAGGKTKKS 199
+ SK KY+ KTKK+
Sbjct: 169 YSSKRKYDT---PKTKKN 183
>gi|55724916|emb|CAH89317.1| TRAP beta protein [Gallus gallus]
Length = 183
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 93/198 (46%), Gaps = 53/198 (26%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 61
D+ ++Y IYN+G+S A +V +SD SFPPE F I G DR+ P +NV+H V+++P
Sbjct: 39 DLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPL 98
Query: 62 SYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVID 121
FNF+ A ++Y A E + VVV +S P QGG
Sbjct: 99 KAAYFNFTSATITYLAQEGGQ--------------VVVGFTSAPG-----QGG------- 132
Query: 122 RVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLIPFLLW 181
++ Q + F+ F DWAAF MTLP + IP LLW
Sbjct: 133 -----------ILAQREFDRRFSPHFL-------------DWAAFGVMTLPSIGIPLLLW 168
Query: 182 FQSKTKYEKLAGGKTKKS 199
+ SK KY+ KTKK+
Sbjct: 169 YSSKRKYDT---PKTKKN 183
>gi|296489663|tpg|DAA31776.1| TPA: translocon-associated protein subunit beta precursor [Bos
taurus]
Length = 183
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 89/188 (47%), Gaps = 50/188 (26%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 61
D+ ++Y IYN+G+S A +V +SD SFPPE F I G DR+ P +NV+H V+++P
Sbjct: 39 DLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPL 98
Query: 62 SYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVID 121
G FNF+ A V+Y A E+ VV+ +S P QGG
Sbjct: 99 KAGYFNFTSATVTYLAQEDGP--------------VVIGFTSAPG-----QGG------- 132
Query: 122 RVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLIPFLLW 181
++ Q + F+ F DWAAF MTLP + +P LLW
Sbjct: 133 -----------ILAQREFDRRFSPHFL-------------DWAAFGVMTLPSIGVPLLLW 168
Query: 182 FQSKTKYE 189
+ SK KY+
Sbjct: 169 YSSKRKYD 176
>gi|154425931|gb|AAI51424.1| SSR2 protein [Bos taurus]
Length = 183
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 93/198 (46%), Gaps = 53/198 (26%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 61
D+ ++Y IYN+G+S A +V +SD SFPPE F I G DR+ P +NV+H V+++P
Sbjct: 39 DLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPL 98
Query: 62 SYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVID 121
G FNF+ A V+Y A E+ IG + AT QGG
Sbjct: 99 KAGYFNFTSATVTYLAQEDGP----VVIGFTSATG---------------QGG------- 132
Query: 122 RVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLIPFLLW 181
++ Q + F+ F DWAAF MTLP + +P LLW
Sbjct: 133 -----------ILAQREFDRRFSPHFL-------------DWAAFGVMTLPSIGVPLLLW 168
Query: 182 FQSKTKYEKLAGGKTKKS 199
+ SK KY+ KTKK+
Sbjct: 169 YSSKRKYDT---PKTKKN 183
>gi|387018814|gb|AFJ51525.1| Signal sequence receptor, beta (SSR2) [Crotalus adamanteus]
gi|387019411|gb|AFJ51823.1| Translocon-associated protein subunit beta-like [Crotalus
adamanteus]
Length = 184
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 91/198 (45%), Gaps = 53/198 (26%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 61
D+ ++Y IYN+G+S A V +SD SFPP F I G DR+ P +NV+H V+++P
Sbjct: 40 DLTLQYNIYNVGSSAALEVELSDDSFPPADFGIVSGMLNVKWDRIAPASNVSHTVVLRPL 99
Query: 62 SYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVID 121
G FNF+ A ++Y E + VVV +S P QGG
Sbjct: 100 KAGYFNFTSATITYLVQEGGQ--------------VVVGFTSAPG-----QGG------- 133
Query: 122 RVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLIPFLLW 181
++ Q + F+ F DWAAF MTLP + IP LLW
Sbjct: 134 -----------ILAQREFDRRFSPHFL-------------DWAAFGVMTLPSIGIPLLLW 169
Query: 182 FQSKTKYEKLAGGKTKKS 199
+ SK KY+ KTKK+
Sbjct: 170 YSSKRKYDT---PKTKKN 184
>gi|198438579|ref|XP_002132080.1| PREDICTED: similar to SSR2 protein [Ciona intestinalis]
Length = 184
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 76/140 (54%), Gaps = 27/140 (19%)
Query: 76 KASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIV 135
+ ++ A +Y +YNIG+ VAT+V ++DS+ FE+ G+ DR+ P TNVTHVV+V
Sbjct: 38 QGNDLAIEYNMYNIGDGVATDVELADSTLHDTDFELISGKMSVKWDRIQPGTNVTHVVVV 97
Query: 136 QPKSYGAFNFSFAEVSYKASENAEDG---------------------------DWAAFAF 168
+P GA NF+ A V Y ASE++E +W F
Sbjct: 98 RPLKSGAQNFTSAVVQYVASEDSEPKFGFSSEIGEVEILSLKEYNRLYAPHVVEWGMFGI 157
Query: 169 MTLPPLLIPFLLWFQSKTKY 188
T+P LL+P++L++ SKTKY
Sbjct: 158 WTIPSLLLPYMLYYNSKTKY 177
>gi|340367721|ref|XP_003382402.1| PREDICTED: translocon-associated protein subunit beta-like
[Amphimedon queenslandica]
Length = 186
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 70/139 (50%), Gaps = 27/139 (19%)
Query: 84 YTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAF 143
YTIYN G+SVA +V ++D SF FE+ G DR+P NVTH VI++P S G +
Sbjct: 47 YTIYNTGSSVARDVKLTDDSFSSTDFELVHGLMSVSWDRIPNSGNVTHTVILRPLSSGIY 106
Query: 144 NFSFAEVSYKASENAEDG---------------------------DWAAFAFMTLPPLLI 176
N S+ +SY ++E+ +W AF M+ P +L+
Sbjct: 107 NISWGSLSYISNEDGHKKVGFTSAPGNYRVLELSEFSREHSSHITEWIAFFLMSAPTMLL 166
Query: 177 PFLLWFQSKTKYEKLAGGK 195
PF LW+ S +KYEKL K
Sbjct: 167 PFYLWYSSHSKYEKLKNKK 185
>gi|239793475|dbj|BAH72851.1| ACYPI007611 [Acyrthosiphon pisum]
Length = 132
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 58/85 (68%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 61
D++VKYTIYN+G+ ATNVV+ DS FP EAF G +R+P NVTH V+++P
Sbjct: 47 DILVKYTIYNVGSVPATNVVLQDSGFPDEAFATVKGNLNIRFNRIPSGANVTHAVVIKPL 106
Query: 62 SYGAFNFSFAEVSYKASENAEDYTI 86
+YG FNF+ A V YK+SE AE + +
Sbjct: 107 TYGRFNFTAAVVQYKSSEGAESHNL 131
Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 52/80 (65%)
Query: 84 YTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAF 143
YTIYN+G+ ATNVV+ DS FP EAF G +R+P NVTH V+++P +YG F
Sbjct: 52 YTIYNVGSVPATNVVLQDSGFPDEAFATVKGNLNIRFNRIPSGANVTHAVVIKPLTYGRF 111
Query: 144 NFSFAEVSYKASENAEDGDW 163
NF+ A V YK+SE AE +
Sbjct: 112 NFTAAVVQYKSSEGAESHNL 131
>gi|291241246|ref|XP_002740523.1| PREDICTED: signal sequence receptor, beta-like [Saccoglossus
kowalevskii]
Length = 189
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 89/197 (45%), Gaps = 50/197 (25%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 61
D+ V Y IYN+G+S A V + D +FP F+ G++ DR+ P +NV+H VIV+P
Sbjct: 42 DLTVAYNIYNVGSSAALKVELRDETFPTSDFQNVHGKYVVTWDRLAPGSNVSHTVIVRPL 101
Query: 62 SYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVID 121
G FNF+ A +SY E+A+
Sbjct: 102 QAGFFNFTAATISYIPQEDAQ--------------------------------------- 122
Query: 122 RVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLIPFLLW 181
PQ T P G S E K S + D W AFA MTLP + IPF+LW
Sbjct: 123 ---PQFGYTSA----PGEGGI--MSLREYDRKFSPHYMD--WLAFAVMTLPSIGIPFMLW 171
Query: 182 FQSKTKYEKLAGGKTKK 198
++SK+KYEK K+KK
Sbjct: 172 YRSKSKYEKPVEKKSKK 188
>gi|260788988|ref|XP_002589530.1| hypothetical protein BRAFLDRAFT_128185 [Branchiostoma floridae]
gi|229274709|gb|EEN45541.1| hypothetical protein BRAFLDRAFT_128185 [Branchiostoma floridae]
Length = 409
Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 68/133 (51%), Gaps = 27/133 (20%)
Query: 84 YTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAF 143
Y+IYN+G S A +V ++D FP F+++ G R+ P TNVTH +++ P G F
Sbjct: 269 YSIYNVGTSAALSVQLTDEGFPESDFKVKHGMPSVNWARIAPGTNVTHSIVLTPLKSGKF 328
Query: 144 NFSFAEVSYKASENA-----------EDG----------------DWAAFAFMTLPPLLI 176
NF+ AE+SY +E A E G DWAAFA MTLP + I
Sbjct: 329 NFTAAELSYVPAEGAQPQIGYTSGPGEGGIMPERDYDRKFSPHILDWAAFAVMTLPSIGI 388
Query: 177 PFLLWFQSKTKYE 189
P +LW+ S KY
Sbjct: 389 PLMLWYSSNRKYR 401
>gi|32966898|gb|AAP92327.1| translocon-associated protein beta [Branchiostoma belcheri
tsingtauense]
Length = 187
Score = 92.4 bits (228), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 68/133 (51%), Gaps = 27/133 (20%)
Query: 84 YTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAF 143
Y+IYN+G S A +V ++D FP F+++ G R+ P TNVTH +++ P G F
Sbjct: 47 YSIYNVGTSAALSVQLTDEGFPESDFKVKHGMPTVNWARIAPGTNVTHSIVLTPLKSGKF 106
Query: 144 NFSFAEVSYKASENA-----------EDG----------------DWAAFAFMTLPPLLI 176
NF+ AE+SY SE A E G DWAAFA MTLP + I
Sbjct: 107 NFTAAELSYVPSEGAQPQIGYTSGPGEGGIMPERDYDRKFSPHILDWAAFAVMTLPSIGI 166
Query: 177 PFLLWFQSKTKYE 189
P +LW+ S KY
Sbjct: 167 PLMLWYSSNRKYR 179
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 52/89 (58%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 61
D+ V Y+IYN+G S A +V ++D FP F+++ G R+ P TNVTH +++ P
Sbjct: 42 DLTVTYSIYNVGTSAALSVQLTDEGFPESDFKVKHGMPTVNWARIAPGTNVTHSIVLTPL 101
Query: 62 SYGAFNFSFAEVSYKASENAEDYTIYNIG 90
G FNF+ AE+SY SE A+ Y G
Sbjct: 102 KSGKFNFTAAELSYVPSEGAQPQIGYTSG 130
>gi|156361844|ref|XP_001625494.1| predicted protein [Nematostella vectensis]
gi|156212330|gb|EDO33394.1| predicted protein [Nematostella vectensis]
Length = 187
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 76/139 (54%), Gaps = 27/139 (19%)
Query: 84 YTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAF 143
YTIYN+G+S A V +++++F +F+++ G + P TNV+H +I++P G F
Sbjct: 48 YTIYNVGSSPAFAVTLTETAFDENSFKVKHGLTSIKWKSIVPGTNVSHTLILEPLKSGVF 107
Query: 144 NFSFAEVSYKASENA-----------EDG----------------DWAAFAFMTLPPLLI 176
NF+ A V+YK SE+A E G DW F+ M++P +LI
Sbjct: 108 NFTSAMVTYKPSEDAPEQVAFSTAPGEGGVMSNKDYQRKHSPHLVDWGLFSLMSIPTMLI 167
Query: 177 PFLLWFQSKTKYEKLAGGK 195
PF++W++S +KYE + K
Sbjct: 168 PFMVWYRSHSKYENIKAKK 186
>gi|170588937|ref|XP_001899230.1| signal sequence receptor beta-like protein [Brugia malayi]
gi|158593443|gb|EDP32038.1| signal sequence receptor beta-like protein, putative [Brugia
malayi]
Length = 193
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 83/163 (50%), Gaps = 29/163 (17%)
Query: 65 AFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSS-FPPEAFEIQGGQFKFVIDRV 123
A F+ ++ + + + DY +YN+G+ A V + D FP + F++ G + +R+
Sbjct: 31 ASKFTLSQYAVEGMDYIIDYRLYNVGDKAALRVALDDRDGFPTQTFDVIQGLLQVRWERI 90
Query: 124 PPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAED----------------------- 160
P NV+H V+V+P++ GAFN+S A+++Y +E+A++
Sbjct: 91 APGNNVSHSVVVRPRAVGAFNYSSAQITYYPTEDAKEVRVSYTTAPGEGYIYRRKDYDRK 150
Query: 161 -----GDWAAFAFMTLPPLLIPFLLWFQSKTKYEKLAGGKTKK 198
G W F + P +IPF+LW+ SK+KY++ A K K
Sbjct: 151 FSAKVGVWLVFLMLVAPSTVIPFILWYSSKSKYDQEAPLKKSK 193
>gi|312074114|ref|XP_003139825.1| hypothetical protein LOAG_04240 [Loa loa]
gi|307765012|gb|EFO24246.1| hypothetical protein LOAG_04240 [Loa loa]
Length = 193
Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 81/163 (49%), Gaps = 29/163 (17%)
Query: 65 AFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDS-SFPPEAFEIQGGQFKFVIDRV 123
A F+ ++ + + + DY +YN+G A V + D FP +AF++ G + +R+
Sbjct: 31 ASKFTLSQYAVEGMDYVIDYRLYNVGEKAALRVTLDDRDGFPTQAFDVIRGLLQVRWERI 90
Query: 124 PPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAED----------------------- 160
P NV+H V+V+P++ GAFN+S A+++Y +E+A++
Sbjct: 91 GPGNNVSHSVVVRPRAVGAFNYSSAQITYYPTEDAKEVRVSYTTAPGEGYIYRRKDYDRK 150
Query: 161 -----GDWAAFAFMTLPPLLIPFLLWFQSKTKYEKLAGGKTKK 198
G W F + P +IPF LW++SK KY++ K K
Sbjct: 151 FSAKVGVWLIFLMLVAPSTIIPFALWYKSKAKYDQETPSKKSK 193
>gi|196014934|ref|XP_002117325.1| expressed hypothetical protein [Trichoplax adhaerens]
gi|190580078|gb|EDV20164.1| expressed hypothetical protein [Trichoplax adhaerens]
Length = 166
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 69/140 (49%), Gaps = 30/140 (21%)
Query: 79 ENAE---DYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIV 135
EN E +Y IYN+G AT V + D ++ ++ G V DR+PP NVTH V++
Sbjct: 19 ENKELVINYEIYNVGQGTATEVELQDDIISGDSMKLVRGILPVVWDRIPPGGNVTHAVVL 78
Query: 136 QPKSYGAFNFSFAEVSYKASENAED---------------------------GDWAAFAF 168
+P G +NF+ A +SY +EN + DWA F
Sbjct: 79 KPIKVGPYNFTSARISYTMNENGDRQLSLSTALGVTSVMNEKEYDRKHSPHLTDWAIFGL 138
Query: 169 MTLPPLLIPFLLWFQSKTKY 188
+ +P ++IP+L+W+ SK+KY
Sbjct: 139 LNIPIIVIPYLMWYSSKSKY 158
>gi|449513277|ref|XP_002198396.2| PREDICTED: translocon-associated protein subunit beta-like, partial
[Taeniopygia guttata]
Length = 142
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 64/125 (51%), Gaps = 27/125 (21%)
Query: 92 SVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAFNFSFAEVS 151
S A +V +SD SFPPE F I G DR+ P +NV+H V+++P G FNF+ A ++
Sbjct: 11 SAALDVELSDDSFPPEDFGIVSGMLSVKWDRIAPASNVSHTVVLRPLKAGYFNFTSATIT 70
Query: 152 YKASENAE----------DG-----------------DWAAFAFMTLPPLLIPFLLWFQS 184
Y A E A+ G DWAAF MTLP + IP LLW+ S
Sbjct: 71 YLAQEGAQVVAGFTSAPGQGGILAQRDFDRRFSPHFLDWAAFGVMTLPSIGIPLLLWYSS 130
Query: 185 KTKYE 189
K KY+
Sbjct: 131 KRKYD 135
>gi|449662098|ref|XP_002168802.2| PREDICTED: translocon-associated protein subunit beta-like [Hydra
magnipapillata]
Length = 183
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 86/189 (45%), Gaps = 50/189 (26%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 61
D+V+KY+I+NIG+S A VV++D SF FE G + P +NVTH+V+++P
Sbjct: 39 DLVIKYSIFNIGSSPANQVVLNDKSFSISDFEFVRGHLPVEWKSIAPGSNVTHIVVLKPL 98
Query: 62 SYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVID 121
G FNF+ ++ Y+ E ++ + +SFP E F +
Sbjct: 99 KIGFFNFTAGQLKYQPGE--------------GDDIQDAFTSFPGEGFIM---------- 134
Query: 122 RVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLIPFLLW 181
+E+ + + +W+ FA M +P LLIPF+LW
Sbjct: 135 --------------------------SEIEFSRKHSPHLLEWSIFALMCMPSLLIPFMLW 168
Query: 182 FQSKTKYEK 190
++S +KY +
Sbjct: 169 YRSHSKYTQ 177
>gi|324515103|gb|ADY46091.1| Translocon-associated protein subunit beta [Ascaris suum]
Length = 211
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 82/166 (49%), Gaps = 35/166 (21%)
Query: 65 AFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDS-SFPPEAFEIQGGQFKFVIDRV 123
A FS ++ + + + DY +YNIG+ A V + D +FP +AFEI G + +R+
Sbjct: 49 ASKFSLSQYAVEGMDYVMDYRLYNIGDKTAMKVTLDDRDAFPTQAFEIIRGLLQVRWERI 108
Query: 124 PPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLP----------- 172
P NV+H V+V+P++ GAFN+S A+++Y SE+A++ + + P
Sbjct: 109 APGQNVSHSVVVRPRAVGAFNYSAAQITYYPSEDAKE---VRIGYTSAPGEGYIYRQKDY 165
Query: 173 --------------------PLLIPFLLWFQSKTKYEKLAGGKTKK 198
+IPF LW+QSK++Y++ K K
Sbjct: 166 ERKFSAKLGVWLVFVLLVSVLTVIPFALWYQSKSRYDQEMPSKKSK 211
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 58/87 (66%), Gaps = 1/87 (1%)
Query: 1 MDVVVKYTIYNIGNSVATNVVVSDS-SFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQ 59
MD V+ Y +YNIG+ A V + D +FP +AFEI G + +R+ P NV+H V+V+
Sbjct: 62 MDYVMDYRLYNIGDKTAMKVTLDDRDAFPTQAFEIIRGLLQVRWERIAPGQNVSHSVVVR 121
Query: 60 PKSYGAFNFSFAEVSYKASENAEDYTI 86
P++ GAFN+S A+++Y SE+A++ I
Sbjct: 122 PRAVGAFNYSAAQITYYPSEDAKEVRI 148
>gi|225711116|gb|ACO11404.1| Translocon-associated protein subunit beta precursor [Caligus
rogercresseyi]
Length = 192
Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 51/69 (73%)
Query: 1 MDVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQP 60
MD+VVKY IYNIG+ A +V VS+ FP ++F++ GQ F +DR+PP +N TH ++V+P
Sbjct: 50 MDIVVKYGIYNIGDLPAVDVSVSEMGFPDDSFDVVSGQTSFKLDRIPPHSNNTHTLVVRP 109
Query: 61 KSYGAFNFS 69
K +G FNF+
Sbjct: 110 KKFGYFNFT 118
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 45/63 (71%)
Query: 84 YTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAF 143
Y IYNIG+ A +V VS+ FP ++F++ GQ F +DR+PP +N TH ++V+PK +G F
Sbjct: 56 YGIYNIGDLPAVDVSVSEMGFPDDSFDVVSGQTSFKLDRIPPHSNNTHTLVVRPKKFGYF 115
Query: 144 NFS 146
NF+
Sbjct: 116 NFT 118
>gi|410262768|gb|JAA19350.1| signal sequence receptor, beta (translocon-associated protein beta)
[Pan troglodytes]
Length = 239
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 61/121 (50%), Gaps = 27/121 (22%)
Query: 84 YTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAF 143
Y IYN+G+S A +V +SD SFPPE F I G DR+ P +NV+H V+++P G F
Sbjct: 63 YNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYF 122
Query: 144 NFSFAEVSYKASEN-----------AEDG----------------DWAAFAFMTLPPLLI 176
NF+ A ++Y A E+ + G DWAAF MTLP +
Sbjct: 123 NFTSATITYLAQEDGPVVIGSTSAPGQGGILAQREFDRRFSPHFLDWAAFGVMTLPSIGS 182
Query: 177 P 177
P
Sbjct: 183 P 183
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 52/80 (65%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 61
D+ ++Y IYN+G+S A +V +SD SFPPE F I G DR+ P +NV+H V+++P
Sbjct: 58 DLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPL 117
Query: 62 SYGAFNFSFAEVSYKASENA 81
G FNF+ A ++Y A E+
Sbjct: 118 KAGYFNFTSATITYLAQEDG 137
>gi|34366445|emb|CAE46211.1| hypothetical protein [Homo sapiens]
Length = 143
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 52/80 (65%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 61
D+ ++Y IYN+G+S A +V +SD SFPPE F I G DR+ P +NV+H V+++P
Sbjct: 60 DLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPL 119
Query: 62 SYGAFNFSFAEVSYKASENA 81
G FNF+ A ++Y A E+
Sbjct: 120 KAGYFNFTSATITYLAQEDG 139
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 48/75 (64%)
Query: 84 YTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAF 143
Y IYN+G+S A +V +SD SFPPE F I G DR+ P +NV+H V+++P G F
Sbjct: 65 YNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYF 124
Query: 144 NFSFAEVSYKASENA 158
NF+ A ++Y A E+
Sbjct: 125 NFTSATITYLAQEDG 139
>gi|417408313|gb|JAA50717.1| Putative translocon-associated protein subunit beta isoform 2,
partial [Desmodus rotundus]
Length = 168
Score = 79.3 bits (194), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 64/122 (52%), Gaps = 9/122 (7%)
Query: 84 YTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHV------VIVQP 137
Y IYN+G+S A +V +SD SFPPE F I G DR+ P +NV+ V+V
Sbjct: 50 YNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSXXXXEDGPVVVGF 109
Query: 138 KSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLIPFLLWFQSKTKYEKLAGGKTK 197
S A+ + + DWAAF MTLP + +P LLW+ SK KY+ KTK
Sbjct: 110 TSAPGQGGILAQREFDRRFSPHFLDWAAFGVMTLPSIGVPLLLWYSSKRKYDT---PKTK 166
Query: 198 KS 199
K+
Sbjct: 167 KN 168
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 34/52 (65%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVT 53
D+ ++Y IYN+G+S A +V +SD SFPPE F I G DR+ P +NV+
Sbjct: 45 DLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVS 96
>gi|47206673|emb|CAF90806.1| unnamed protein product [Tetraodon nigroviridis]
Length = 149
Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 51/81 (62%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 61
D+ ++Y IYN+G+S A V +SD SFPPE F I G +R+ P +NV+H V+++P
Sbjct: 41 DLTLQYNIYNVGSSAALEVELSDDSFPPEDFGIVSGMLNVKWERIAPASNVSHTVVLRPL 100
Query: 62 SYGAFNFSFAEVSYKASENAE 82
G FNF+ A VSY A E E
Sbjct: 101 KAGYFNFTSASVSYVAQEGGE 121
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 47/76 (61%)
Query: 84 YTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAF 143
Y IYN+G+S A V +SD SFPPE F I G +R+ P +NV+H V+++P G F
Sbjct: 46 YNIYNVGSSAALEVELSDDSFPPEDFGIVSGMLNVKWERIAPASNVSHTVVLRPLKAGYF 105
Query: 144 NFSFAEVSYKASENAE 159
NF+ A VSY A E E
Sbjct: 106 NFTSASVSYVAQEGGE 121
>gi|342326258|gb|AEL23044.1| signal sequence receptor beta-like protein [Cherax quadricarinatus]
Length = 104
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 55/103 (53%), Gaps = 28/103 (27%)
Query: 107 EAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENA-------- 158
E F+I GGQ + DR+ P NV+H V+V+PK YG FNF+ AEVSY+ SE++
Sbjct: 2 EDFDIAGGQLQVKFDRIAPNANVSHTVVVKPKKYGYFNFTAAEVSYQPSEDSAEIQIGYT 61
Query: 159 ----EDG----------------DWAAFAFMTLPPLLIPFLLW 181
E G DW FA + +P LL+P+++W
Sbjct: 62 SEPGEGGIIAFRDYDRKFSPHVFDWLIFALLMIPALLVPYMMW 104
>gi|114153022|gb|ABI52677.1| translocon associated complex TRAP beta-subunit [Argas
monolakensis]
Length = 202
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 59/118 (50%), Gaps = 29/118 (24%)
Query: 83 DYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGA 142
DY IYN+G SVA +V + DSSF + F++ G +DR+PP N++H V+V+ G
Sbjct: 46 DYNIYNVGGSVALDVRIVDSSFGGD-FQVVSGLLDLKVDRLPPNANLSHTVVVRSSKPGR 104
Query: 143 FNFSFAEVSYKASENA------------EDG----------------DWAAFAFMTLP 172
FNF+ AEV Y+ SE E G DW AFA M+LP
Sbjct: 105 FNFTGAEVYYRTSEEGREVQVGHTSEPGEGGIVPGRDFDRQFSPHVMDWLAFAVMSLP 162
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 61
D++V Y IYN+G SVA +V + DSSF + F++ G +DR+PP N++H V+V+
Sbjct: 42 DIIVDYNIYNVGGSVALDVRIVDSSFGGD-FQVVSGLLDLKVDRLPPNANLSHTVVVRSS 100
Query: 62 SYGAFNFSFAEVSYKASENAEDYTI 86
G FNF+ AEV Y+ SE + +
Sbjct: 101 KPGRFNFTGAEVYYRTSEEGREVQV 125
>gi|149048120|gb|EDM00696.1| signal sequence receptor, beta (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 164
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 61/133 (45%), Gaps = 46/133 (34%)
Query: 84 YTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAF 143
Y IYN+G+S A +V +SD SFPPE F I V+++P G F
Sbjct: 44 YNIYNVGSSAALDVELSDDSFPPEDFGIVS-------------------VVLRPLKAGYF 84
Query: 144 NFSFAEVSYKASENA-----------EDG----------------DWAAFAFMTLPPLLI 176
NF+ A ++Y A E+ + G DWAAF MTLP + I
Sbjct: 85 NFTSATITYLAQEDGPVVIGSTSAPGQGGILAQREFDRRFSPHFLDWAAFGVMTLPSIGI 144
Query: 177 PFLLWFQSKTKYE 189
P LLW+ SK KY+
Sbjct: 145 PLLLWYSSKRKYD 157
>gi|148683320|gb|EDL15267.1| signal sequence receptor, beta, isoform CRA_b [Mus musculus]
Length = 164
Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 61/133 (45%), Gaps = 46/133 (34%)
Query: 84 YTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAF 143
Y IYN+G+S A +V +SD SFPPE F I V+++P G F
Sbjct: 44 YNIYNVGSSAALDVELSDDSFPPEDFGIVS-------------------VVLRPLKAGYF 84
Query: 144 NFSFAEVSYKASENA-----------EDG----------------DWAAFAFMTLPPLLI 176
NF+ A ++Y A E+ + G DWAAF MTLP + I
Sbjct: 85 NFTSATITYLAQEDGPVVIGSTSAPGQGGILAQREFDRRFSPHFLDWAAFGVMTLPSIGI 144
Query: 177 PFLLWFQSKTKYE 189
P LLW+ SK KY+
Sbjct: 145 PLLLWYSSKRKYD 157
>gi|341898890|gb|EGT54825.1| hypothetical protein CAEBREN_20265 [Caenorhabditis brenneri]
Length = 188
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Query: 1 MDVVVKYTIYNIGNSVATNVVVSDS-SFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQ 59
MD V++Y +YN+G+ A V + D SFP +FEI G +++P TNVTH V+++
Sbjct: 42 MDFVLEYGLYNVGDKAAQKVTIDDRHSFPTNSFEIIKGLLHVHYEKIPAGTNVTHSVVIR 101
Query: 60 PKSYGAFNFSFAEVSYKASENAEDYTIYN 88
P++YG FN++ A+V+Y T+ N
Sbjct: 102 PRAYGFFNYTAAQVTYYTDNENLHVTLTN 130
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 74/154 (48%), Gaps = 30/154 (19%)
Query: 73 VSYKASENAE---DYTIYNIGNSVATNVVVSDS-SFPPEAFEIQGGQFKFVIDRVPPQTN 128
+S A EN + +Y +YN+G+ A V + D SFP +FEI G +++P TN
Sbjct: 34 LSTYAVENMDFVLEYGLYNVGDKAAQKVTIDDRHSFPTNSFEIIKGLLHVHYEKIPAGTN 93
Query: 129 VTHVVIVQPKSYGAFNFSFAEVSYKA-SENA-------------------------EDGD 162
VTH V+++P++YG FN++ A+V+Y +EN + G
Sbjct: 94 VTHSVVIRPRAYGFFNYTAAQVTYYTDNENLHVTLTNTPGEGYIYKQREYDRRFAPKYGY 153
Query: 163 WAAFAFMTLPPLLIPFLLWFQSKTKYEKLAGGKT 196
+ F + P L F L+ QSK ++ + KT
Sbjct: 154 FFVFFLVVAPTTLGSFFLFQQSKARFPNIVKKKT 187
>gi|320167466|gb|EFW44365.1| signal sequence receptor beta [Capsaspora owczarzaki ATCC 30864]
Length = 192
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Query: 1 MDVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQP 60
MD+ ++Y+++NIG A+++ + D FP E F I G D + NVTH+V+V+P
Sbjct: 42 MDITIQYSLFNIGEGAASSIQLLDY-FPQEGFNIVAGSTSAKWDHLAAGANVTHLVVVRP 100
Query: 61 KSYGAFNFSFAEVSYKASENAED 83
S+G +NF+F +VSY + +A D
Sbjct: 101 LSHGRYNFTFGQVSYLETADASD 123
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 65/145 (44%), Gaps = 29/145 (20%)
Query: 84 YTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAF 143
Y+++NIG A+++ + D FP E F I G D + NVTH+V+V+P S+G +
Sbjct: 48 YSLFNIGEGAASSIQLLDY-FPQEGFNIVAGSTSAKWDHLAAGANVTHLVVVRPLSHGRY 106
Query: 144 NFSFAEVSYKASENAED----------------------------GDWAAFAFMTLPPLL 175
NF+F +VSY + +A D WA FA T +
Sbjct: 107 NFTFGQVSYLETADASDPVVALTSAPGVQQIYPFNDYDRQYASHILQWAVFAVATAVLVG 166
Query: 176 IPFLLWFQSKTKYEKLAGGKTKKSK 200
P L+ S+ KY +A + + +
Sbjct: 167 GPAFLYLGSRAKYVAVAAEEKNRKQ 191
>gi|350646850|emb|CCD58571.1| translocon-associated protein, beta subunit precursor (trap-beta)
(signal sequence receptor beta subunit), putative
[Schistosoma mansoni]
Length = 153
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 60/118 (50%), Gaps = 1/118 (0%)
Query: 72 EVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTH 131
E ++ E YTIYN S A V F F + G VP +NVTH
Sbjct: 36 EFIFQEKEMTILYTIYNFHESRAAKDVELFDIFSETEFTLIHGSPSARWPVVPASSNVTH 95
Query: 132 VVIVQPKSYGAFNFSFAEVSYKASENAEDG-DWAAFAFMTLPPLLIPFLLWFQSKTKY 188
V+I++P+ G NFS A ++YK+++ + +W FA P LLIP++LW S +KY
Sbjct: 96 VIILKPQINGVHNFSSATITYKSTDLQKSSIEWIGFALFVTPCLLIPYMLWHSSASKY 153
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 61
++ + YTIYN S A V F F + G VP +NVTHV+I++P+
Sbjct: 43 EMTILYTIYNFHESRAAKDVELFDIFSETEFTLIHGSPSARWPVVPASSNVTHVIILKPQ 102
Query: 62 SYGAFNFSFAEVSYKASE 79
G NFS A ++YK+++
Sbjct: 103 INGVHNFSSATITYKSTD 120
>gi|308489704|ref|XP_003107045.1| CRE-TRAP-2 protein [Caenorhabditis remanei]
gi|308252933|gb|EFO96885.1| CRE-TRAP-2 protein [Caenorhabditis remanei]
Length = 188
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 1 MDVVVKYTIYNIGNSVATNVVVSDS-SFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQ 59
MD V++Y IYN+G+ A V + D SFP +FEI G +++P NVTH V+++
Sbjct: 42 MDFVLEYGIYNVGDKPAQKVTLDDRHSFPTNSFEIVKGLLHVHFEKIPAGGNVTHSVVIR 101
Query: 60 PKSYGAFNFSFAEVSYKASENAEDYTIYN 88
P++YG FN++ A+V+Y T+ N
Sbjct: 102 PRAYGFFNYTAAQVTYYTDNENLHVTLTN 130
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%), Gaps = 4/84 (4%)
Query: 73 VSYKASENAE---DYTIYNIGNSVATNVVVSDS-SFPPEAFEIQGGQFKFVIDRVPPQTN 128
+S A EN + +Y IYN+G+ A V + D SFP +FEI G +++P N
Sbjct: 34 LSTYAVENMDFVLEYGIYNVGDKPAQKVTLDDRHSFPTNSFEIVKGLLHVHFEKIPAGGN 93
Query: 129 VTHVVIVQPKSYGAFNFSFAEVSY 152
VTH V+++P++YG FN++ A+V+Y
Sbjct: 94 VTHSVVIRPRAYGFFNYTAAQVTY 117
>gi|444719047|gb|ELW59847.1| Translocon-associated protein subunit beta [Tupaia chinensis]
Length = 124
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 49/77 (63%), Gaps = 10/77 (12%)
Query: 127 TNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDG----DWAAFAFMTLPPLLIPFLLWF 182
+NV+H V+++P G FNF+ A ++Y A E DG DWAAF MTLP + IP LLW+
Sbjct: 54 SNVSHTVVLRPLKAGYFNFTSATITYLAQE---DGPVVLDWAAFGVMTLPSIGIPLLLWY 110
Query: 183 QSKTKYEKLAGGKTKKS 199
SK KY+ KTKK+
Sbjct: 111 SSKRKYDT---PKTKKN 124
>gi|268576545|ref|XP_002643252.1| C. briggsae CBR-TRAP-2 protein [Caenorhabditis briggsae]
Length = 188
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 76/146 (52%), Gaps = 21/146 (14%)
Query: 1 MDVVVKYTIYNIGNSVATNVVVSDS-SFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQ 59
MD V++Y +YN+G+ A V + D SFP +FEI G +++P +NVTH V+++
Sbjct: 42 MDFVLEYGLYNVGDKPAQKVTIDDRHSFPTNSFEIVKGLLHVHYEKIPAGSNVTHSVVIR 101
Query: 60 PKSYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFV 119
P+++G FN++ A+V+Y N+ V+ ++ P E + + ++
Sbjct: 102 PRAFGFFNYTAAQVTYYTDNE---------------NLHVTLTNTPGEGYIYRQREYD-- 144
Query: 120 IDRVPPQTN--VTHVVIVQPKSYGAF 143
R P+ + +I+ P ++G+F
Sbjct: 145 -RRFAPKYTYFIVFFLIIAPTTFGSF 169
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 53/84 (63%), Gaps = 4/84 (4%)
Query: 73 VSYKASENAE---DYTIYNIGNSVATNVVVSDS-SFPPEAFEIQGGQFKFVIDRVPPQTN 128
+S A EN + +Y +YN+G+ A V + D SFP +FEI G +++P +N
Sbjct: 34 LSTYAVENMDFVLEYGLYNVGDKPAQKVTIDDRHSFPTNSFEIVKGLLHVHYEKIPAGSN 93
Query: 129 VTHVVIVQPKSYGAFNFSFAEVSY 152
VTH V+++P+++G FN++ A+V+Y
Sbjct: 94 VTHSVVIRPRAFGFFNYTAAQVTY 117
>gi|17569613|ref|NP_508150.1| Protein TRAP-2 [Caenorhabditis elegans]
gi|74965890|sp|Q22169.1|SSRB_CAEEL RecName: Full=Translocon-associated protein subunit beta; Flags:
Precursor
gi|351020735|emb|CCD62717.1| Protein TRAP-2 [Caenorhabditis elegans]
Length = 188
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Query: 1 MDVVVKYTIYNIGNSVATNVVVSDS-SFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQ 59
MD V++Y +YN+G+ A V + D SFP +F+I G +++P +NVTH V+++
Sbjct: 42 MDFVLEYGLYNVGDKPAQKVTIDDRHSFPTNSFDIVKGLLFVHFEQIPAGSNVTHSVVIR 101
Query: 60 PKSYGAFNFSFAEVSYKASENAEDYTIYN 88
P+++G FN++ A+V+Y T+ N
Sbjct: 102 PRAFGFFNYTAAQVTYYTDNENHHVTLTN 130
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 75/154 (48%), Gaps = 30/154 (19%)
Query: 73 VSYKASENAE---DYTIYNIGNSVATNVVVSDS-SFPPEAFEIQGGQFKFVIDRVPPQTN 128
+S A EN + +Y +YN+G+ A V + D SFP +F+I G +++P +N
Sbjct: 34 LSTYAVENMDFVLEYGLYNVGDKPAQKVTIDDRHSFPTNSFDIVKGLLFVHFEQIPAGSN 93
Query: 129 VTHVVIVQPKSYGAFNFSFAEVSYKA-SENAE------------------DGDWA----- 164
VTH V+++P+++G FN++ A+V+Y +EN D +A
Sbjct: 94 VTHSVVIRPRAFGFFNYTAAQVTYYTDNENHHVTLTNTPGEGYIYRQREYDRRFAPKYTY 153
Query: 165 --AFAFMTLPPLLIPFLLWFQSKTKYEKLAGGKT 196
F + P L FLL+ QSK ++ + K+
Sbjct: 154 FLVFFLIVAPTTLGSFLLFQQSKARFPNVIKKKS 187
>gi|339240617|ref|XP_003376234.1| electron transfer flavoprotein, beta subunit [Trichinella spiralis]
gi|316975062|gb|EFV58521.1| electron transfer flavoprotein, beta subunit [Trichinella spiralis]
Length = 469
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 53/133 (39%), Gaps = 50/133 (37%)
Query: 84 YTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAF 143
Y +YNIG A NV + D +F P F QF V P+ YG
Sbjct: 347 YHLYNIGGQAALNVELRDENFSPNHF-----QFLKV-----------------PQDYGRM 384
Query: 144 NFSFAEVSYKASE------------NAED----------------GDWAAFAFMTLPPLL 175
NF+ AE++Y + E ED GDW F M LP LL
Sbjct: 385 NFTAAEITYHSGEENTKRRKSYTTIKGEDIIYRLKDYDRRFEQHYGDWILFVLMILPSLL 444
Query: 176 IPFLLWFQSKTKY 188
+P +LW +S+ KY
Sbjct: 445 VPAMLWLKSRQKY 457
Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 22/78 (28%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 61
+++V Y +YNIG A NV + D +F P F QF V P+
Sbjct: 342 ELIVIYHLYNIGGQAALNVELRDENFSPNHF-----QFLKV-----------------PQ 379
Query: 62 SYGAFNFSFAEVSYKASE 79
YG NF+ AE++Y + E
Sbjct: 380 DYGRMNFTAAEITYHSGE 397
>gi|167517247|ref|XP_001742964.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778063|gb|EDQ91678.1| predicted protein [Monosiga brevicollis MX1]
Length = 180
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 53/83 (63%), Gaps = 2/83 (2%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPE--AFEIQGGQFKFVIDRVPPQTNVTHVVIVQ 59
D+ ++Y++YN G++ AT++ +SD+SF E F++ G + PQ NV+H V+VQ
Sbjct: 37 DLTIRYSLYNTGDAEATDITLSDTSFEEENSGFQLVSGLTSVNFASLTPQANVSHHVVVQ 96
Query: 60 PKSYGAFNFSFAEVSYKASENAE 82
+ G +N S A V+YKAS +A+
Sbjct: 97 AEYSGYYNLSAATVTYKASPDAQ 119
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
Query: 84 YTIYNIGNSVATNVVVSDSSFPPE--AFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYG 141
Y++YN G++ AT++ +SD+SF E F++ G + PQ NV+H V+VQ + G
Sbjct: 42 YSLYNTGDAEATDITLSDTSFEEENSGFQLVSGLTSVNFASLTPQANVSHHVVVQAEYSG 101
Query: 142 AFNFSFAEVSYKASENAE 159
+N S A V+YKAS +A+
Sbjct: 102 YYNLSAATVTYKASPDAQ 119
>gi|395845453|ref|XP_003795451.1| PREDICTED: translocon-associated protein subunit beta [Otolemur
garnettii]
Length = 191
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 59/144 (40%), Gaps = 41/144 (28%)
Query: 84 YTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPP------------------ 125
Y IYN+G+S A +V +SD SFPPE F I G DR+ P
Sbjct: 44 YNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPYPLGSSWRAGFEPTTPGI 103
Query: 126 ----QTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDG----------------DWAA 165
T ++H S+ F +F S + G DWAA
Sbjct: 104 WAQCPTPLSH---RHHSSFLPFQSTFHVSIGSTSAPGQGGILAQREFDRRFSPHFLDWAA 160
Query: 166 FAFMTLPPLLIPFLLWFQSKTKYE 189
F MTLP + IP LLW+ SK KY+
Sbjct: 161 FGVMTLPSIGIPLLLWYSSKRKYD 184
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 30/47 (63%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPP 48
D+ ++Y IYN+G+S A +V +SD SFPPE F I G DR+ P
Sbjct: 39 DLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAP 85
>gi|55724918|emb|CAH89318.1| TRAP beta protein [Ambystoma mexicanum]
Length = 121
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 48/81 (59%), Gaps = 5/81 (6%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 61
D+ ++Y IYN+G+S A +V +SD SF I G DR+ P +NV+H V+++P
Sbjct: 13 DLRLQYNIYNVGSSAALDVDLSDDSFG-----IVSGMLNVKWDRIAPASNVSHTVVLRPL 67
Query: 62 SYGAFNFSFAEVSYKASENAE 82
G FNF+ A ++Y A E +
Sbjct: 68 KAGYFNFTSATITYVAQEGGQ 88
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 84 YTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAF 143
Y IYN+G+S A +V +SD SF I G DR+ P +NV+H V+++P G F
Sbjct: 18 YNIYNVGSSAALDVDLSDDSFG-----IVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYF 72
Query: 144 NFSFAEVSYKASENAE 159
NF+ A ++Y A E +
Sbjct: 73 NFTSATITYVAQEGGQ 88
>gi|56754997|gb|AAW25681.1| SJCHGC05940 protein [Schistosoma japonicum]
gi|226468800|emb|CAX76428.1| Translocon-associated protein subunit beta precursor [Schistosoma
japonicum]
gi|226468802|emb|CAX76429.1| Translocon-associated protein subunit beta precursor [Schistosoma
japonicum]
gi|226468804|emb|CAX76430.1| Translocon-associated protein subunit beta precursor [Schistosoma
japonicum]
gi|226468806|emb|CAX76431.1| Translocon-associated protein subunit beta precursor [Schistosoma
japonicum]
gi|226468808|emb|CAX76432.1| Translocon-associated protein subunit beta precursor [Schistosoma
japonicum]
gi|226468810|emb|CAX76433.1| Translocon-associated protein subunit beta precursor [Schistosoma
japonicum]
gi|226468812|emb|CAX76434.1| Translocon-associated protein subunit beta precursor [Schistosoma
japonicum]
gi|226472842|emb|CAX71107.1| Translocon-associated protein subunit beta precursor [Schistosoma
japonicum]
Length = 180
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 61/144 (42%), Gaps = 27/144 (18%)
Query: 72 EVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTH 131
E ++ E YTIYN S A V +F F + G +P +NVTH
Sbjct: 37 EFIFEEKEMTVLYTIYNFHESRAARDVELLDTFAETEFTLIHGSPSARWSVIPASSNVTH 96
Query: 132 VVIVQPKSYGAFNFSFAEVSYKASE---------------------------NAEDGDWA 164
V+I++P+ G NFS A ++YK+++ + +W
Sbjct: 97 VLILKPQINGFHNFSSATITYKSNDLLDSALLYSSSPGLLTIHKLKEYNKRFTSHTMEWI 156
Query: 165 AFAFMTLPPLLIPFLLWFQSKTKY 188
FA P LLIP++LW S +KY
Sbjct: 157 GFALFVTPCLLIPYMLWHSSASKY 180
>gi|226472838|emb|CAX71105.1| Translocon-associated protein subunit beta precursor [Schistosoma
japonicum]
Length = 180
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 61/144 (42%), Gaps = 27/144 (18%)
Query: 72 EVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTH 131
E ++ E YTIYN S A V +F F + G +P +NVTH
Sbjct: 37 EFIFEEKEMTVLYTIYNFHESRAARDVELLDTFAETEFALIHGSPSARWSVIPASSNVTH 96
Query: 132 VVIVQPKSYGAFNFSFAEVSYKASE---------------------------NAEDGDWA 164
V+I++P+ G NFS A ++YK+++ + +W
Sbjct: 97 VLILKPQINGFHNFSSATITYKSNDLLDSALLYSSSPGLLTIHKLKEYNKRFTSHTMEWI 156
Query: 165 AFAFMTLPPLLIPFLLWFQSKTKY 188
FA P LLIP++LW S +KY
Sbjct: 157 GFALFVTPCLLIPYMLWHSSASKY 180
>gi|256072258|ref|XP_002572453.1| hypothetical protein [Schistosoma mansoni]
Length = 179
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 60/144 (41%), Gaps = 27/144 (18%)
Query: 72 EVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTH 131
E ++ E YTIYN S A V F F + G VP +NVTH
Sbjct: 36 EFIFQEKEMTILYTIYNFHESRAAKDVELFDIFSETEFTLIHGSPSARWPVVPASSNVTH 95
Query: 132 VVIVQPKSYGAFNFSFAEVSYKASE---------------------------NAEDGDWA 164
V+I++P+ G NFS A ++YK+++ + +W
Sbjct: 96 VIILKPQINGVHNFSSATITYKSTDLQKSSFLYSSAPGLLTIHRLKEYNKRFTSHTIEWI 155
Query: 165 AFAFMTLPPLLIPFLLWFQSKTKY 188
FA P LLIP++LW S +KY
Sbjct: 156 GFALFVTPCLLIPYMLWHSSASKY 179
>gi|402856554|ref|XP_003892852.1| PREDICTED: translocon-associated protein subunit beta [Papio
anubis]
Length = 282
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 65/143 (45%), Gaps = 40/143 (27%)
Query: 83 DYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGA 142
Y IYN+G+ + S SF A I F+ + +NV+H V+++P G
Sbjct: 152 QYNIYNVGSRTKL-LYYSYLSF---AILI------FLEKQAASASNVSHTVVLRPLKAGY 201
Query: 143 FNFSFAEVSYKASENA-----------EDG----------------DWAAFAFMTLPPLL 175
FNF+ A ++Y A E+ + G DWAAF MTLP +
Sbjct: 202 FNFTSATITYLAQEDGPVVIGSTSAPGQGGILAQREFDRRFSPHFLDWAAFGVMTLPSIG 261
Query: 176 IPFLLWFQSKTKYEKLAGGKTKK 198
IP LLW+ SK KY+ KTKK
Sbjct: 262 IPLLLWYSSKRKYDT---PKTKK 281
>gi|395729710|ref|XP_002810103.2| PREDICTED: translocon-associated protein subunit beta [Pongo
abelii]
Length = 161
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 49/99 (49%), Gaps = 30/99 (30%)
Query: 127 TNVTHVVIVQPKSYGAFNFSFAEVSYKASENA-----------EDG-------------- 161
+NV+H V+++P G FNF+ A ++Y A E+ + G
Sbjct: 65 SNVSHTVVLRPLKAGYFNFTSATITYLAQEDGPVVIGSTSAPGQGGILAQREFDRRFSPH 124
Query: 162 --DWAAFAFMTLPPLLIPFLLWFQSKTKYEKLAGGKTKK 198
DWAAF MTLP + IP LLW+ SK KY+ KTKK
Sbjct: 125 FLDWAAFGVMTLPSIGIPLLLWYSSKRKYDT---PKTKK 160
>gi|449489827|ref|XP_002188449.2| PREDICTED: translocon-associated protein subunit beta-like
[Taeniopygia guttata]
Length = 154
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 49/101 (48%), Gaps = 33/101 (32%)
Query: 127 TNVTHVVIVQPKSYGAFNFSFAEVSYKASENA-----------EDG-------------- 161
+NV+H V+++P G FNF+ A ++Y A E A + G
Sbjct: 58 SNVSHTVVLRPLKAGYFNFTSATITYVAQEGAPVVAGFTSAPGQGGILAQRDFDRRFSPH 117
Query: 162 --DWAAFAFMTLPPLLIPFLLWFQSKTKYEKLAGGKTKKSK 200
DWAAF MTLP + IP LLW+ SK KY+ T KSK
Sbjct: 118 FLDWAAFGVMTLPSIGIPLLLWYSSKRKYD------TPKSK 152
>gi|226472840|emb|CAX71106.1| Translocon-associated protein subunit beta precursor [Schistosoma
japonicum]
Length = 180
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 60/144 (41%), Gaps = 27/144 (18%)
Query: 72 EVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTH 131
E ++ E YTIYN S A V +F F + G +P +NV H
Sbjct: 37 EFIFEEKEMTVLYTIYNFHESRAARDVELLDTFAETEFTLIHGSPSARWSVIPASSNVAH 96
Query: 132 VVIVQPKSYGAFNFSFAEVSYKASE---------------------------NAEDGDWA 164
V+I++P+ G NFS A ++YK+++ + +W
Sbjct: 97 VLILKPQINGFHNFSSATITYKSNDLLDSALLYSSSPGLLTIHKLKEYNKRFTSHTMEWI 156
Query: 165 AFAFMTLPPLLIPFLLWFQSKTKY 188
FA P LLIP++LW S +KY
Sbjct: 157 GFALFVTPCLLIPYMLWHSSASKY 180
>gi|449265660|gb|EMC76821.1| Translocon-associated protein subunit beta, partial [Columba livia]
Length = 98
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 49/100 (49%), Gaps = 30/100 (30%)
Query: 127 TNVTHVVIVQPKSYGAFNFSFAEVSYKASENAE----------DG--------------- 161
+NV+H V+++P G FNF+ A ++Y A E + G
Sbjct: 2 SNVSHTVVLRPLKAGYFNFTSATITYLAQEGGQVVVGFTSAPGQGGILAQREFDRRFSPH 61
Query: 162 --DWAAFAFMTLPPLLIPFLLWFQSKTKYEKLAGGKTKKS 199
DWAAF MTLP + IP LLW+ SK KY+ KTKK+
Sbjct: 62 FLDWAAFGVMTLPSIGIPLLLWYSSKRKYDT---PKTKKN 98
>gi|313231512|emb|CBY08626.1| unnamed protein product [Oikopleura dioica]
Length = 186
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 64/135 (47%), Gaps = 29/135 (21%)
Query: 84 YTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAF 143
Y IYNIG S A +V ++ +F + + I G K + P ++VTH ++V+P GA
Sbjct: 49 YKIYNIGQSAALDVEFTEENFAND-WSIVSGDAKTSWKSIEPDSSVTHEIVVKPSKAGAQ 107
Query: 144 NFSFAEVSYKASENAEDG----------------------------DWAAFAFMTLPPLL 175
N + A ++Y+ S ++E+ DW F +T+P +L
Sbjct: 108 NITSAVLNYRPSSDSEETVRSFSSDYGVANIIPENEFLRNHASHGIDWLIFLVLTIPSIL 167
Query: 176 IPFLLWFQSKTKYEK 190
P++L+ +S ++ K
Sbjct: 168 FPYMLYNKSVARFTK 182
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 9/97 (9%)
Query: 1 MDVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQP 60
+D+ Y IYNIG S A +V ++ +F + + I G K + P ++VTH ++V+P
Sbjct: 43 VDMTFTYKIYNIGQSAALDVEFTEENFAND-WSIVSGDAKTSWKSIEPDSSVTHEIVVKP 101
Query: 61 KSYGAFNFSFAEVSYKASENAE--------DYTIYNI 89
GA N + A ++Y+ S ++E DY + NI
Sbjct: 102 SKAGAQNITSAVLNYRPSSDSEETVRSFSSDYGVANI 138
>gi|324105215|gb|ADY18370.1| translocon-associated protein subunit beta precursor [Glycera
tridactyla]
Length = 90
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 52/136 (38%), Gaps = 49/136 (36%)
Query: 45 RVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSF 104
R+ +TN +HVVIV+P G FNF+ AEVSY ASE
Sbjct: 4 RIASKTNTSHVVIVRPLKAGYFNFTSAEVSYMASE------------------------- 38
Query: 105 PPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWA 164
D PQ T P G NF Y + DWA
Sbjct: 39 ----------------DSTEPQIGYTSA----PGQGGIMNFK----DYDRKFSPHVLDWA 74
Query: 165 AFAFMTLPPLLIPFLL 180
AFA MTLP L IPFLL
Sbjct: 75 AFAVMTLPSLGIPFLL 90
>gi|357134460|ref|XP_003568835.1| PREDICTED: translocon-associated protein subunit beta-like
[Brachypodium distachyon]
Length = 193
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%)
Query: 3 VVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKS 62
+ V +YN G++ A +V ++D S+P EAFE+ G+ ++R+ P +HV +++ K+
Sbjct: 47 LAVSLDLYNQGSATAYDVAITDDSWPKEAFELVSGEVSKTLERLDPGATASHVFVLETKA 106
Query: 63 YGAFNFSFAEVSYKASENA 81
G F S A + Y+ A
Sbjct: 107 QGRFQGSPAVIKYRVPTKA 125
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 43/73 (58%)
Query: 86 IYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAFNF 145
+YN G++ A +V ++D S+P EAFE+ G+ ++R+ P +HV +++ K+ G F
Sbjct: 53 LYNQGSATAYDVAITDDSWPKEAFELVSGEVSKTLERLDPGATASHVFVLETKAQGRFQG 112
Query: 146 SFAEVSYKASENA 158
S A + Y+ A
Sbjct: 113 SPAVIKYRVPTKA 125
>gi|313231510|emb|CBY08624.1| unnamed protein product [Oikopleura dioica]
Length = 149
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 62/135 (45%), Gaps = 30/135 (22%)
Query: 86 IYNIGNSVATNVVVSDSSFPPE--AFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAF 143
IYNIG S A +V ++ +F + + G K + P ++VTH ++V+P GA
Sbjct: 11 IYNIGQSAALDVEFTEENFANDWSIVRLHCGDAKTSWKSIEPDSSVTHEIVVKPSKAGAQ 70
Query: 144 NFSFAEVSYKASENAEDG----------------------------DWAAFAFMTLPPLL 175
N + A ++Y+ S ++E+ DW F +T+P +L
Sbjct: 71 NITSAVLNYRPSSDSEETVRSFSSDYGVANIIPENEFLRNHASHGIDWLIFLVLTIPSIL 130
Query: 176 IPFLLWFQSKTKYEK 190
P++L+ +S ++ K
Sbjct: 131 FPYMLYNKSVARFTK 145
Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 10/91 (10%)
Query: 9 IYNIGNSVATNVVVSDSSFPPE--AFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAF 66
IYNIG S A +V ++ +F + + G K + P ++VTH ++V+P GA
Sbjct: 11 IYNIGQSAALDVEFTEENFANDWSIVRLHCGDAKTSWKSIEPDSSVTHEIVVKPSKAGAQ 70
Query: 67 NFSFAEVSYKASENAE--------DYTIYNI 89
N + A ++Y+ S ++E DY + NI
Sbjct: 71 NITSAVLNYRPSSDSEETVRSFSSDYGVANI 101
>gi|326501412|dbj|BAK02495.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326507858|dbj|BAJ86672.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 193
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 47/86 (54%)
Query: 3 VVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKS 62
+ V +YN G++ A +V ++D S+P EAFE+ G+ ++R+ P +H +++ K+
Sbjct: 47 LAVSLDLYNQGSATAYDVAINDDSWPKEAFELVSGEVSKTLERLEPGATASHAFVLESKT 106
Query: 63 YGAFNFSFAEVSYKASENAEDYTIYN 88
G F S A + Y+ + A Y+
Sbjct: 107 QGRFQASPAVIKYRVATKAALQEAYS 132
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 43/73 (58%)
Query: 86 IYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAFNF 145
+YN G++ A +V ++D S+P EAFE+ G+ ++R+ P +H +++ K+ G F
Sbjct: 53 LYNQGSATAYDVAINDDSWPKEAFELVSGEVSKTLERLEPGATASHAFVLESKTQGRFQA 112
Query: 146 SFAEVSYKASENA 158
S A + Y+ + A
Sbjct: 113 SPAVIKYRVATKA 125
>gi|290982584|ref|XP_002674010.1| hypothetical protein NAEGRDRAFT_80788 [Naegleria gruberi]
gi|284087597|gb|EFC41266.1| hypothetical protein NAEGRDRAFT_80788 [Naegleria gruberi]
Length = 224
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 59/146 (40%), Gaps = 33/146 (22%)
Query: 85 TIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAFN 144
T+ N+G A ++ V D+ +P FE+ G+ K ++V P V++ + PKS G N
Sbjct: 77 TVINVGEETAYDIDVKDNEWPEAQFELAEGETKASFEKVAPNDRVSYKYTIVPKSVGEIN 136
Query: 145 FSFAEVSYKASENAED---------------------------------GDWAAFAFMTL 171
A +Y+ + AE GDW F ++L
Sbjct: 137 TQHALATYRLAPAAEKDEKSLKLISKSNVLPAIPVMTQAEYDRKHASHVGDWIVFFILSL 196
Query: 172 PPLLIPFLLWFQSKTKYEKLAGGKTK 197
P +P++++ + + LA K K
Sbjct: 197 IPTALPYVVYMYANNQIVDLANQKQK 222
>gi|218187342|gb|EEC69769.1| hypothetical protein OsI_00025 [Oryza sativa Indica Group]
gi|222617568|gb|EEE53700.1| hypothetical protein OsJ_00022 [Oryza sativa Japonica Group]
Length = 1355
Score = 52.8 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 44/79 (55%)
Query: 3 VVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKS 62
+ V +YN G++ A +V ++D ++P EAFE+ G+ ++R+ P +H +++ K
Sbjct: 44 LAVSLDLYNQGSATAYDVSINDDTWPKEAFELVSGEMSKTLERLDPGVTASHAFVLETKV 103
Query: 63 YGAFNFSFAEVSYKASENA 81
G F S A ++Y+ A
Sbjct: 104 QGRFQGSPAVITYRVPTKA 122
Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 42/73 (57%)
Query: 86 IYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAFNF 145
+YN G++ A +V ++D ++P EAFE+ G+ ++R+ P +H +++ K G F
Sbjct: 50 LYNQGSATAYDVSINDDTWPKEAFELVSGEMSKTLERLDPGVTASHAFVLETKVQGRFQG 109
Query: 146 SFAEVSYKASENA 158
S A ++Y+ A
Sbjct: 110 SPAVITYRVPTKA 122
>gi|414868523|tpg|DAA47080.1| TPA: hypothetical protein ZEAMMB73_824979, partial [Zea mays]
Length = 157
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 44/74 (59%)
Query: 3 VVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKS 62
V V +YN G++ A +V ++D S+P +AFE+ G+ ++R+ P TH +++ K+
Sbjct: 45 VAVSLDLYNQGSATAYDVSLNDDSWPTQAFELVTGEKSKTLERLDPGATATHTYVLETKT 104
Query: 63 YGAFNFSFAEVSYK 76
G F S A ++Y+
Sbjct: 105 QGRFQGSPAIITYR 118
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 42/68 (61%)
Query: 86 IYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAFNF 145
+YN G++ A +V ++D S+P +AFE+ G+ ++R+ P TH +++ K+ G F
Sbjct: 51 LYNQGSATAYDVSLNDDSWPTQAFELVTGEKSKTLERLDPGATATHTYVLETKTQGRFQG 110
Query: 146 SFAEVSYK 153
S A ++Y+
Sbjct: 111 SPAIITYR 118
>gi|15636691|gb|AAL02141.1| signal sequence receptor beta chain precursor [Branchiostoma
belcheri]
Length = 105
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 36/59 (61%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQP 60
D+ V Y+IYN+G S A +V ++D FP F+++ G R+ P TNVTH +++ P
Sbjct: 46 DLTVTYSIYNVGTSAALSVQLTDEGFPESDFKVKHGMPTVNWARIAPGTNVTHSIVLTP 104
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 33/54 (61%)
Query: 84 YTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQP 137
Y+IYN+G S A +V ++D FP F+++ G R+ P TNVTH +++ P
Sbjct: 51 YSIYNVGTSAALSVQLTDEGFPESDFKVKHGMPTVNWARIAPGTNVTHSIVLTP 104
>gi|308081744|ref|NP_001183839.1| uncharacterized protein LOC100502432 precursor [Zea mays]
gi|238014920|gb|ACR38495.1| unknown [Zea mays]
Length = 165
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 44/74 (59%)
Query: 3 VVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKS 62
V V +YN G++ A +V ++D S+P +AFE+ G+ ++R+ P TH +++ K+
Sbjct: 45 VAVSLDLYNQGSATAYDVSLNDDSWPTQAFELVTGEKSKTLERLDPGATATHTYVLETKT 104
Query: 63 YGAFNFSFAEVSYK 76
G F S A ++Y+
Sbjct: 105 QGRFQGSPAIITYR 118
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 42/68 (61%)
Query: 86 IYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAFNF 145
+YN G++ A +V ++D S+P +AFE+ G+ ++R+ P TH +++ K+ G F
Sbjct: 51 LYNQGSATAYDVSLNDDSWPTQAFELVTGEKSKTLERLDPGATATHTYVLETKTQGRFQG 110
Query: 146 SFAEVSYK 153
S A ++Y+
Sbjct: 111 SPAIITYR 118
>gi|308481281|ref|XP_003102846.1| hypothetical protein CRE_29892 [Caenorhabditis remanei]
gi|308260932|gb|EFP04885.1| hypothetical protein CRE_29892 [Caenorhabditis remanei]
Length = 182
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 57/141 (40%), Gaps = 31/141 (21%)
Query: 79 ENAEDYTIYNIGNSVATNVVVSDS-SFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQP 137
+N +Y I NIGN+ A NV + D SFP + FEI G +PPQ V H V+V P
Sbjct: 36 QNVFEYQIVNIGNTSAINVELHDRDSFPTDRFEILKGSPNTKFAEIPPQMTVYHHVVVVP 95
Query: 138 K------------------------------SYGAFNFSFAEVSYKASENAEDGDWAAFA 167
+ S G F E + KA + FA
Sbjct: 96 RNVQPIEDKNVTVDYTDSETKQVSHVSTLWYSKGRFTHYLHEDALKAVIGTSSKPFLGFA 155
Query: 168 FMTLPPLLIPFLLWFQSKTKY 188
+ LP + L +F+SK++Y
Sbjct: 156 AIALPFTALSSLFYFRSKSRY 176
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Query: 4 VVKYTIYNIGNSVATNVVVSDS-SFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKS 62
V +Y I NIGN+ A NV + D SFP + FEI G +PPQ V H V+V P++
Sbjct: 38 VFEYQIVNIGNTSAINVELHDRDSFPTDRFEILKGSPNTKFAEIPPQMTVYHHVVVVPRN 97
Query: 63 YGAFNFSFAEVSYKASENAE 82
V Y SE +
Sbjct: 98 VQPIEDKNVTVDYTDSETKQ 117
>gi|414868522|tpg|DAA47079.1| TPA: hypothetical protein ZEAMMB73_824979 [Zea mays]
Length = 192
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 44/74 (59%)
Query: 3 VVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKS 62
V V +YN G++ A +V ++D S+P +AFE+ G+ ++R+ P TH +++ K+
Sbjct: 45 VAVSLDLYNQGSATAYDVSLNDDSWPTQAFELVTGEKSKTLERLDPGATATHTYVLETKT 104
Query: 63 YGAFNFSFAEVSYK 76
G F S A ++Y+
Sbjct: 105 QGRFQGSPAIITYR 118
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 42/68 (61%)
Query: 86 IYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAFNF 145
+YN G++ A +V ++D S+P +AFE+ G+ ++R+ P TH +++ K+ G F
Sbjct: 51 LYNQGSATAYDVSLNDDSWPTQAFELVTGEKSKTLERLDPGATATHTYVLETKTQGRFQG 110
Query: 146 SFAEVSYK 153
S A ++Y+
Sbjct: 111 SPAIITYR 118
>gi|414868521|tpg|DAA47078.1| TPA: hypothetical protein ZEAMMB73_824979 [Zea mays]
Length = 193
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 44/74 (59%)
Query: 3 VVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKS 62
V V +YN G++ A +V ++D S+P +AFE+ G+ ++R+ P TH +++ K+
Sbjct: 45 VAVSLDLYNQGSATAYDVSLNDDSWPTQAFELVTGEKSKTLERLDPGATATHTYVLETKT 104
Query: 63 YGAFNFSFAEVSYK 76
G F S A ++Y+
Sbjct: 105 QGRFQGSPAIITYR 118
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 42/68 (61%)
Query: 86 IYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAFNF 145
+YN G++ A +V ++D S+P +AFE+ G+ ++R+ P TH +++ K+ G F
Sbjct: 51 LYNQGSATAYDVSLNDDSWPTQAFELVTGEKSKTLERLDPGATATHTYVLETKTQGRFQG 110
Query: 146 SFAEVSYK 153
S A ++Y+
Sbjct: 111 SPAIITYR 118
>gi|15128456|dbj|BAB62640.1| P0402A09.25 [Oryza sativa Japonica Group]
gi|20804445|dbj|BAB92142.1| P0455C04.19 [Oryza sativa Japonica Group]
Length = 188
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 44/79 (55%)
Query: 3 VVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKS 62
+ V +YN G++ A +V ++D ++P EAFE+ G+ ++R+ P +H +++ K
Sbjct: 44 LAVSLDLYNQGSATAYDVSINDDTWPKEAFELVSGEMSKTLERLDPGVTASHAFVLETKV 103
Query: 63 YGAFNFSFAEVSYKASENA 81
G F S A ++Y+ A
Sbjct: 104 QGRFQGSPAVITYRVPTKA 122
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 42/73 (57%)
Query: 86 IYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAFNF 145
+YN G++ A +V ++D ++P EAFE+ G+ ++R+ P +H +++ K G F
Sbjct: 50 LYNQGSATAYDVSINDDTWPKEAFELVSGEMSKTLERLDPGVTASHAFVLETKVQGRFQG 109
Query: 146 SFAEVSYKASENA 158
S A ++Y+ A
Sbjct: 110 SPAVITYRVPTKA 122
>gi|215704479|dbj|BAG93913.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 190
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 44/79 (55%)
Query: 3 VVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKS 62
+ V +YN G++ A +V ++D ++P EAFE+ G+ ++R+ P +H +++ K
Sbjct: 44 LAVSLDLYNQGSATAYDVSINDDTWPKEAFELVSGEMSKTLERLDPGVTASHAFVLETKV 103
Query: 63 YGAFNFSFAEVSYKASENA 81
G F S A ++Y+ A
Sbjct: 104 QGRFQGSPAVITYRVPTKA 122
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 42/73 (57%)
Query: 86 IYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAFNF 145
+YN G++ A +V ++D ++P EAFE+ G+ ++R+ P +H +++ K G F
Sbjct: 50 LYNQGSATAYDVSINDDTWPKEAFELVSGEMSKTLERLDPGVTASHAFVLETKVQGRFQG 109
Query: 146 SFAEVSYKASENA 158
S A ++Y+ A
Sbjct: 110 SPAVITYRVPTKA 122
>gi|414868520|tpg|DAA47077.1| TPA: hypothetical protein ZEAMMB73_824979 [Zea mays]
Length = 173
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 44/74 (59%)
Query: 3 VVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKS 62
V V +YN G++ A +V ++D S+P +AFE+ G+ ++R+ P TH +++ K+
Sbjct: 45 VAVSLDLYNQGSATAYDVSLNDDSWPTQAFELVTGEKSKTLERLDPGATATHTYVLETKT 104
Query: 63 YGAFNFSFAEVSYK 76
G F S A ++Y+
Sbjct: 105 QGRFQGSPAIITYR 118
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 42/68 (61%)
Query: 86 IYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAFNF 145
+YN G++ A +V ++D S+P +AFE+ G+ ++R+ P TH +++ K+ G F
Sbjct: 51 LYNQGSATAYDVSLNDDSWPTQAFELVTGEKSKTLERLDPGATATHTYVLETKTQGRFQG 110
Query: 146 SFAEVSYK 153
S A ++Y+
Sbjct: 111 SPAIITYR 118
>gi|52076608|dbj|BAD45510.1| unknown protein [Oryza sativa Japonica Group]
Length = 190
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 44/79 (55%)
Query: 3 VVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKS 62
+ V +YN G++ A +V ++D ++P EAFE+ G+ ++R+ P +H +++ K
Sbjct: 44 LAVSLDLYNQGSATAYDVSINDDTWPKEAFELVSGEMSKTLERLDPGVTASHAFVLETKV 103
Query: 63 YGAFNFSFAEVSYKASENA 81
G F S A ++Y+ A
Sbjct: 104 QGRFQGSPAVITYRVPTKA 122
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 42/73 (57%)
Query: 86 IYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAFNF 145
+YN G++ A +V ++D ++P EAFE+ G+ ++R+ P +H +++ K G F
Sbjct: 50 LYNQGSATAYDVSINDDTWPKEAFELVSGEMSKTLERLDPGVTASHAFVLETKVQGRFQG 109
Query: 146 SFAEVSYKASENA 158
S A ++Y+ A
Sbjct: 110 SPAVITYRVPTKA 122
>gi|226492777|ref|NP_001149647.1| translocon-associated protein beta containing protein precursor
[Zea mays]
gi|195628792|gb|ACG36225.1| translocon-associated protein beta containing protein [Zea mays]
gi|223974959|gb|ACN31667.1| unknown [Zea mays]
gi|414868519|tpg|DAA47076.1| TPA: Translocon-associated protein beta containing protein [Zea
mays]
Length = 190
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 44/74 (59%)
Query: 3 VVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKS 62
V V +YN G++ A +V ++D S+P +AFE+ G+ ++R+ P TH +++ K+
Sbjct: 45 VAVSLDLYNQGSATAYDVSLNDDSWPTQAFELVTGEKSKTLERLDPGATATHTYVLETKT 104
Query: 63 YGAFNFSFAEVSYK 76
G F S A ++Y+
Sbjct: 105 QGRFQGSPAIITYR 118
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 42/68 (61%)
Query: 86 IYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAFNF 145
+YN G++ A +V ++D S+P +AFE+ G+ ++R+ P TH +++ K+ G F
Sbjct: 51 LYNQGSATAYDVSLNDDSWPTQAFELVTGEKSKTLERLDPGATATHTYVLETKTQGRFQG 110
Query: 146 SFAEVSYK 153
S A ++Y+
Sbjct: 111 SPAIITYR 118
>gi|115433986|ref|NP_001041751.1| Os01g0102700 [Oryza sativa Japonica Group]
gi|113531282|dbj|BAF03665.1| Os01g0102700 [Oryza sativa Japonica Group]
Length = 205
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 44/79 (55%)
Query: 3 VVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKS 62
+ V +YN G++ A +V ++D ++P EAFE+ G+ ++R+ P +H +++ K
Sbjct: 44 LAVSLDLYNQGSATAYDVSINDDTWPKEAFELVSGEMSKTLERLDPGVTASHAFVLETKV 103
Query: 63 YGAFNFSFAEVSYKASENA 81
G F S A ++Y+ A
Sbjct: 104 QGRFQGSPAVITYRVPTKA 122
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 42/73 (57%)
Query: 86 IYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAFNF 145
+YN G++ A +V ++D ++P EAFE+ G+ ++R+ P +H +++ K G F
Sbjct: 50 LYNQGSATAYDVSINDDTWPKEAFELVSGEMSKTLERLDPGVTASHAFVLETKVQGRFQG 109
Query: 146 SFAEVSYKASENA 158
S A ++Y+ A
Sbjct: 110 SPAVITYRVPTKA 122
>gi|326426652|gb|EGD72222.1| hypothetical protein PTSG_00243 [Salpingoeca sp. ATCC 50818]
Length = 184
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEA--FEIQGGQFKFVIDRVPPQTNVTHVVIVQ 59
D+ V+Y+++NIG A ++ V+D F E F + G F + + NV+H VIV+
Sbjct: 38 DITVRYSLFNIGEEEAKDISVTDEGFTREDSPFTLVAGLPSFNLAGLKAGANVSHNVIVR 97
Query: 60 PKSYGAFNFSFAEVSYKASENAE 82
G +N + A V+Y ASE+A+
Sbjct: 98 VDRPGYYNLTAARVTYFASEDAD 120
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 6/98 (6%)
Query: 84 YTIYNIGNSVATNVVVSDSSFPPEA--FEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYG 141
Y+++NIG A ++ V+D F E F + G F + + NV+H VIV+ G
Sbjct: 43 YSLFNIGEEEAKDISVTDEGFTREDSPFTLVAGLPSFNLAGLKAGANVSHNVIVRVDRPG 102
Query: 142 AFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLIPFL 179
+N + A V+Y ASE+A D + A++ M P +P L
Sbjct: 103 YYNLTAARVTYFASEDA-DAEQVAYSSM---PRDVPIL 136
>gi|414878070|tpg|DAA55201.1| TPA: hypothetical protein ZEAMMB73_114623 [Zea mays]
Length = 193
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 43/74 (58%)
Query: 3 VVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKS 62
V V +YN G++ A +V ++D S+P E FE+ G+ ++R+ P +H +++ K+
Sbjct: 45 VAVSLDLYNQGSATAYDVSINDDSWPTEVFELVTGEKSKTLERLDPGATASHTYVLETKT 104
Query: 63 YGAFNFSFAEVSYK 76
G F S A ++Y+
Sbjct: 105 QGRFQGSPAIITYR 118
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 41/68 (60%)
Query: 86 IYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAFNF 145
+YN G++ A +V ++D S+P E FE+ G+ ++R+ P +H +++ K+ G F
Sbjct: 51 LYNQGSATAYDVSINDDSWPTEVFELVTGEKSKTLERLDPGATASHTYVLETKTQGRFQG 110
Query: 146 SFAEVSYK 153
S A ++Y+
Sbjct: 111 SPAIITYR 118
>gi|195609004|gb|ACG26332.1| translocon-associated protein beta containing protein [Zea mays]
Length = 191
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 43/74 (58%)
Query: 3 VVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKS 62
V V +YN G++ A +V ++D S+P E FE+ G+ ++R+ P +H +++ K+
Sbjct: 46 VAVSLDLYNQGSATAYDVSINDDSWPTEVFELVTGEKSKTLERLDPGATASHTYVLETKT 105
Query: 63 YGAFNFSFAEVSYK 76
G F S A ++Y+
Sbjct: 106 QGRFQGSPAIITYR 119
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 41/68 (60%)
Query: 86 IYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAFNF 145
+YN G++ A +V ++D S+P E FE+ G+ ++R+ P +H +++ K+ G F
Sbjct: 52 LYNQGSATAYDVSINDDSWPTEVFELVTGEKSKTLERLDPGATASHTYVLETKTQGRFQG 111
Query: 146 SFAEVSYK 153
S A ++Y+
Sbjct: 112 SPAIITYR 119
>gi|194702576|gb|ACF85372.1| unknown [Zea mays]
gi|194707872|gb|ACF88020.1| unknown [Zea mays]
gi|224034209|gb|ACN36180.1| unknown [Zea mays]
gi|414878071|tpg|DAA55202.1| TPA: translocon-associated protein beta containing protein [Zea
mays]
Length = 190
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 43/74 (58%)
Query: 3 VVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKS 62
V V +YN G++ A +V ++D S+P E FE+ G+ ++R+ P +H +++ K+
Sbjct: 45 VAVSLDLYNQGSATAYDVSINDDSWPTEVFELVTGEKSKTLERLDPGATASHTYVLETKT 104
Query: 63 YGAFNFSFAEVSYK 76
G F S A ++Y+
Sbjct: 105 QGRFQGSPAIITYR 118
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 41/68 (60%)
Query: 86 IYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAFNF 145
+YN G++ A +V ++D S+P E FE+ G+ ++R+ P +H +++ K+ G F
Sbjct: 51 LYNQGSATAYDVSINDDSWPTEVFELVTGEKSKTLERLDPGATASHTYVLETKTQGRFQG 110
Query: 146 SFAEVSYK 153
S A ++Y+
Sbjct: 111 SPAIITYR 118
>gi|226495983|ref|NP_001140613.1| hypothetical protein precursor [Zea mays]
gi|194700186|gb|ACF84177.1| unknown [Zea mays]
gi|414878069|tpg|DAA55200.1| TPA: hypothetical protein ZEAMMB73_114623 [Zea mays]
Length = 136
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 43/74 (58%)
Query: 3 VVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKS 62
V V +YN G++ A +V ++D S+P E FE+ G+ ++R+ P +H +++ K+
Sbjct: 45 VAVSLDLYNQGSATAYDVSINDDSWPTEVFELVTGEKSKTLERLDPGATASHTYVLETKT 104
Query: 63 YGAFNFSFAEVSYK 76
G F S A ++Y+
Sbjct: 105 QGRFQGSPAIITYR 118
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 41/68 (60%)
Query: 86 IYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAFNF 145
+YN G++ A +V ++D S+P E FE+ G+ ++R+ P +H +++ K+ G F
Sbjct: 51 LYNQGSATAYDVSINDDSWPTEVFELVTGEKSKTLERLDPGATASHTYVLETKTQGRFQG 110
Query: 146 SFAEVSYK 153
S A ++Y+
Sbjct: 111 SPAIITYR 118
>gi|328866294|gb|EGG14679.1| translocon-associated protein subunit beta [Dictyostelium
fasciculatum]
Length = 210
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 52/134 (38%), Gaps = 28/134 (20%)
Query: 84 YTIYNIGNSVATNVVVSDSSFPPEA-FEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGA 142
+ IYN+G A ++ +D+ F A FE+ GQ + + P TNV+ + + P G
Sbjct: 70 FIIYNVGEGAAYDISFADTDFGASADFEVVKGQSSGKWEVIEPNTNVSQTITITPSKGGV 129
Query: 143 FNFSFAEVSYKASENAEDG---------------------------DWAAFAFMTLPPLL 175
F + + Y+ S+N E +W F ++ +
Sbjct: 130 FPLTSTILEYRKSQNEELSHTSAASYTGMYVESVEEFDKRTSLHLKEWGTFILLSFGSVA 189
Query: 176 IPFLLWFQSKTKYE 189
PF LW K YE
Sbjct: 190 FPFALWSYYKVNYE 203
Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 5 VKYTIYNIGNSVATNVVVSDSSFPPEA-FEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSY 63
+ + IYN+G A ++ +D+ F A FE+ GQ + + P TNV+ + + P
Sbjct: 68 ISFIIYNVGEGAAYDISFADTDFGASADFEVVKGQSSGKWEVIEPNTNVSQTITITPSKG 127
Query: 64 GAFNFSFAEVSYKASENAE 82
G F + + Y+ S+N E
Sbjct: 128 GVFPLTSTILEYRKSQNEE 146
>gi|268537188|ref|XP_002633730.1| Hypothetical protein CBG03415 [Caenorhabditis briggsae]
Length = 182
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 79 ENAEDYTIYNIGNSVATNVVVSDS-SFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQP 137
EN +Y I NIG++ A NV SD SFP + FEI G +PP ++V+H ++V P
Sbjct: 36 ENVFEYQIINIGDTAAINVDFSDRGSFPTDKFEIVSGSLDAKYAVIPPHSSVSHHIVVVP 95
Query: 138 KSYGAFNFSFAEVSYKASEN 157
+ A V Y SE+
Sbjct: 96 RVPHAIEDKDVLVDYTDSES 115
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 4 VVKYTIYNIGNSVATNVVVSDS-SFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKS 62
V +Y I NIG++ A NV SD SFP + FEI G +PP ++V+H ++V P+
Sbjct: 38 VFEYQIINIGDTAAINVDFSDRGSFPTDKFEIVSGSLDAKYAVIPPHSSVSHHIVVVPRV 97
Query: 63 YGAFNFSFAEVSYKASEN 80
A V Y SE+
Sbjct: 98 PHAIEDKDVLVDYTDSES 115
>gi|428178925|gb|EKX47798.1| hypothetical protein GUITHDRAFT_137181 [Guillardia theta CCMP2712]
Length = 190
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 61
D+ +Y ++NIG+ A +V + D + E + + G ++P NVTH+V+++
Sbjct: 45 DIPFQYRLFNIGSGPAYDVTLEDD-WSAEEYSVVSGMVSGSWPQIPAGGNVTHIVVLKAH 103
Query: 62 SYGAFNFSFAEVSYKASENAEDYTI 86
S+G + + A+V+YKA+++A D +
Sbjct: 104 SFGYKSSTPAKVTYKATQDAADVQV 128
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 84 YTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAF 143
Y ++NIG+ A +V + D + E + + G ++P NVTH+V+++ S+G
Sbjct: 50 YRLFNIGSGPAYDVTLEDD-WSAEEYSVVSGMVSGSWPQIPAGGNVTHIVVLKAHSFGYK 108
Query: 144 NFSFAEVSYKASENAED 160
+ + A+V+YKA+++A D
Sbjct: 109 SSTPAKVTYKATQDAAD 125
>gi|357135093|ref|XP_003569146.1| PREDICTED: translocon-associated protein subunit beta-like
[Brachypodium distachyon]
Length = 194
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 46/86 (53%)
Query: 3 VVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKS 62
+ V +YN G++ A +V ++D S+P EAFE+ G +++++ P + +H +++ K
Sbjct: 48 LAVTLDLYNQGSATAYDVSLNDDSWPQEAFELVSGSTSKIVEKLDPGSTASHSFVLETKV 107
Query: 63 YGAFNFSFAEVSYKASENAEDYTIYN 88
G F S A + Y+ A Y+
Sbjct: 108 QGRFQGSPAVIKYRVPTKAALQEAYS 133
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 42/73 (57%)
Query: 86 IYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAFNF 145
+YN G++ A +V ++D S+P EAFE+ G +++++ P + +H +++ K G F
Sbjct: 54 LYNQGSATAYDVSLNDDSWPQEAFELVSGSTSKIVEKLDPGSTASHSFVLETKVQGRFQG 113
Query: 146 SFAEVSYKASENA 158
S A + Y+ A
Sbjct: 114 SPAVIKYRVPTKA 126
>gi|218195918|gb|EEC78345.1| hypothetical protein OsI_18092 [Oryza sativa Indica Group]
gi|222629874|gb|EEE62006.1| hypothetical protein OsJ_16788 [Oryza sativa Japonica Group]
Length = 192
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 46/86 (53%)
Query: 3 VVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKS 62
+ V +YN G++ A +V ++D S+P EAF++ G +++++ P +H I++ K
Sbjct: 48 LAVTLNLYNQGSATAYDVSLNDDSWPQEAFQLISGTTSKIVEKLDPGATASHNFILETKV 107
Query: 63 YGAFNFSFAEVSYKASENAEDYTIYN 88
G F S A ++Y+ A Y+
Sbjct: 108 QGKFQGSPAIITYRVPTKAALQEAYS 133
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 42/73 (57%)
Query: 86 IYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAFNF 145
+YN G++ A +V ++D S+P EAF++ G +++++ P +H I++ K G F
Sbjct: 54 LYNQGSATAYDVSLNDDSWPQEAFQLISGTTSKIVEKLDPGATASHNFILETKVQGKFQG 113
Query: 146 SFAEVSYKASENA 158
S A ++Y+ A
Sbjct: 114 SPAIITYRVPTKA 126
>gi|215737084|dbj|BAG96013.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 194
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 46/86 (53%)
Query: 3 VVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKS 62
+ V +YN G++ A +V ++D S+P EAF++ G +++++ P +H I++ K
Sbjct: 48 LAVTLNLYNQGSATAYDVSLNDDSWPQEAFQLISGTTSKIVEKLDPGATASHNFILETKV 107
Query: 63 YGAFNFSFAEVSYKASENAEDYTIYN 88
G F S A ++Y+ A Y+
Sbjct: 108 QGKFQGSPAIITYRVPTKAALQEAYS 133
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 42/73 (57%)
Query: 86 IYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAFNF 145
+YN G++ A +V ++D S+P EAF++ G +++++ P +H I++ K G F
Sbjct: 54 LYNQGSATAYDVSLNDDSWPQEAFQLISGTTSKIVEKLDPGATASHNFILETKVQGKFQG 113
Query: 146 SFAEVSYKASENA 158
S A ++Y+ A
Sbjct: 114 SPAIITYRVPTKA 126
>gi|115461583|ref|NP_001054391.1| Os05g0103100 [Oryza sativa Japonica Group]
gi|113577942|dbj|BAF16305.1| Os05g0103100 [Oryza sativa Japonica Group]
Length = 225
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 46/86 (53%)
Query: 3 VVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKS 62
+ V +YN G++ A +V ++D S+P EAF++ G +++++ P +H I++ K
Sbjct: 48 LAVTLNLYNQGSATAYDVSLNDDSWPQEAFQLISGTTSKIVEKLDPGATASHNFILETKV 107
Query: 63 YGAFNFSFAEVSYKASENAEDYTIYN 88
G F S A ++Y+ A Y+
Sbjct: 108 QGKFQGSPAIITYRVPTKAALQEAYS 133
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 42/73 (57%)
Query: 86 IYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAFNF 145
+YN G++ A +V ++D S+P EAF++ G +++++ P +H I++ K G F
Sbjct: 54 LYNQGSATAYDVSLNDDSWPQEAFQLISGTTSKIVEKLDPGATASHNFILETKVQGKFQG 113
Query: 146 SFAEVSYKASENA 158
S A ++Y+ A
Sbjct: 114 SPAIITYRVPTKA 126
>gi|326694409|gb|AEA03482.1| signal sequence receptor beta [Kryptolebias marmoratus]
Length = 48
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 28/48 (58%)
Query: 26 SFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAFNFSFAEV 73
SFPPE F I G DR+ P +NV+H V++ P G FNF+ A V
Sbjct: 1 SFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLPPLKAGYFNFTSASV 48
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 28/48 (58%)
Query: 103 SFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAFNFSFAEV 150
SFPPE F I G DR+ P +NV+H V++ P G FNF+ A V
Sbjct: 1 SFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLPPLKAGYFNFTSASV 48
>gi|17541372|ref|NP_501843.1| Protein K08F4.3 [Caenorhabditis elegans]
gi|3878376|emb|CAA93083.1| Protein K08F4.3 [Caenorhabditis elegans]
Length = 182
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 57/141 (40%), Gaps = 31/141 (21%)
Query: 79 ENAEDYTIYNIGNSVATNVVVSD-SSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQP 137
ENA +Y I NIG S A V +SD SFP + FEI G +P + + H ++V P
Sbjct: 36 ENAFEYQIINIGLSPALKVELSDLKSFPTDRFEILKGSATASFPVIPANSTIYHHIVVIP 95
Query: 138 K----------------------------SYGAFNFS--FAEVSYKASENAEDGDWAAFA 167
+ SY ++ FAE + + E + F
Sbjct: 96 RVPQAIEDHDVTVNYTDSETGKRARTSTVSYDKRGYTHFFAETAMRKVEGVNCTHFLGFG 155
Query: 168 FMTLPPLLIPFLLWFQSKTKY 188
+ P IP +L++ SK +Y
Sbjct: 156 AIAFPLTAIPAILYWISKRRY 176
>gi|149048122|gb|EDM00698.1| signal sequence receptor, beta (predicted), isoform CRA_c [Rattus
norvegicus]
Length = 109
Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/28 (64%), Positives = 21/28 (75%)
Query: 162 DWAAFAFMTLPPLLIPFLLWFQSKTKYE 189
DWAAF MTLP + IP LLW+ SK KY+
Sbjct: 75 DWAAFGVMTLPSIGIPLLLWYSSKRKYD 102
>gi|148683319|gb|EDL15266.1| signal sequence receptor, beta, isoform CRA_a [Mus musculus]
Length = 109
Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/28 (64%), Positives = 21/28 (75%)
Query: 162 DWAAFAFMTLPPLLIPFLLWFQSKTKYE 189
DWAAF MTLP + IP LLW+ SK KY+
Sbjct: 75 DWAAFGVMTLPSIGIPLLLWYSSKRKYD 102
>gi|355722016|gb|AES07446.1| signal sequence receptor, beta [Mustela putorius furo]
Length = 79
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 26/38 (68%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQF 39
D+ ++Y IYN+G+S A +V +SD SFPPE F I G
Sbjct: 39 DLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGML 76
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 22/33 (66%)
Query: 84 YTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQF 116
Y IYN+G+S A +V +SD SFPPE F I G
Sbjct: 44 YNIYNVGSSAALDVELSDDSFPPEDFGIVSGML 76
>gi|12841149|dbj|BAB25097.1| unnamed protein product [Mus musculus]
gi|12841445|dbj|BAB25211.1| unnamed protein product [Mus musculus]
Length = 75
Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 18/28 (64%), Positives = 21/28 (75%)
Query: 162 DWAAFAFMTLPPLLIPFLLWFQSKTKYE 189
DWAAF MTLP + IP LLW+ SK KY+
Sbjct: 41 DWAAFGVMTLPSIGIPLLLWYSSKRKYD 68
>gi|341903845|gb|EGT59780.1| hypothetical protein CAEBREN_29022 [Caenorhabditis brenneri]
Length = 183
Score = 44.7 bits (104), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 79 ENAEDYTIYNIGNSVATNVVVSDS-SFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQP 137
EN +Y + NIG++ A +VV+SD SFP + FE+ G + P +H +IV P
Sbjct: 36 ENVYEYHLVNIGDTSAVDVVLSDRDSFPTDRFEVLKGSLDARFAVILPNATASHHIIVAP 95
Query: 138 K 138
+
Sbjct: 96 R 96
Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 4 VVKYTIYNIGNSVATNVVVSDS-SFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 61
V +Y + NIG++ A +VV+SD SFP + FE+ G + P +H +IV P+
Sbjct: 38 VYEYHLVNIGDTSAVDVVLSDRDSFPTDRFEVLKGSLDARFAVILPNATASHHIIVAPR 96
>gi|255073713|ref|XP_002500531.1| translocon-associated complex trap beta subunit [Micromonas sp.
RCC299]
gi|226515794|gb|ACO61789.1| translocon-associated complex trap beta subunit [Micromonas sp.
RCC299]
Length = 224
Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 61
++ ++ T+YN G + AT V ++D + +F + G +PP T TH +V PK
Sbjct: 45 NMTIEITLYNAGETAATGVEINDPGWDSSSFAMLGPSTSAKFASIPPLTKKTHRFVVVPK 104
Query: 62 SYGAFNFSFAEVSYKA 77
G F+ + VSY A
Sbjct: 105 VTGQFSAGPSLVSYTA 120
Score = 43.1 bits (100), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 36/72 (50%)
Query: 83 DYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGA 142
+ T+YN G + AT V ++D + +F + G +PP T TH +V PK G
Sbjct: 49 EITLYNAGETAATGVEINDPGWDSSSFAMLGPSTSAKFASIPPLTKKTHRFVVVPKVTGQ 108
Query: 143 FNFSFAEVSYKA 154
F+ + VSY A
Sbjct: 109 FSAGPSLVSYTA 120
>gi|307110682|gb|EFN58918.1| hypothetical protein CHLNCDRAFT_140871 [Chlorella variabilis]
Length = 228
Score = 43.9 bits (102), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 5 VKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYG 64
V +IYN G + AT V ++++S+PPE F ++ G+ DR+P +V H + K
Sbjct: 64 VTISIYNAGKAPATGVKLTEASWPPEGFAVE-GELTASFDRIPEGASVQHTYKLTGKEAS 122
Query: 65 AFNFSFAEVSYKASEN 80
V+Y +E+
Sbjct: 123 TVRVPGTVVTYTPAED 138
>gi|346466259|gb|AEO32974.1| hypothetical protein [Amblyomma maculatum]
Length = 212
Score = 43.5 bits (101), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 40/74 (54%)
Query: 3 VVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKS 62
V V +YN G++ A +V +SD S+ E F+I G +R+ +V+H ++Q +
Sbjct: 66 VTVTIDVYNEGSATAYDVSLSDDSWAHEVFDITSGSTSKTWERLDAGASVSHTFVLQSQV 125
Query: 63 YGAFNFSFAEVSYK 76
G ++ S A + Y+
Sbjct: 126 KGLYHSSSAVIKYR 139
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 38/68 (55%)
Query: 86 IYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAFNF 145
+YN G++ A +V +SD S+ E F+I G +R+ +V+H ++Q + G ++
Sbjct: 72 VYNEGSATAYDVSLSDDSWAHEVFDITSGSTSKTWERLDAGASVSHTFVLQSQVKGLYHS 131
Query: 146 SFAEVSYK 153
S A + Y+
Sbjct: 132 SSAVIKYR 139
>gi|449455914|ref|XP_004145695.1| PREDICTED: translocon-associated protein subunit beta-like isoform
1 [Cucumis sativus]
gi|449455916|ref|XP_004145696.1| PREDICTED: translocon-associated protein subunit beta-like isoform
2 [Cucumis sativus]
gi|449492917|ref|XP_004159140.1| PREDICTED: translocon-associated protein subunit beta-like isoform
1 [Cucumis sativus]
gi|449492920|ref|XP_004159141.1| PREDICTED: translocon-associated protein subunit beta-like isoform
2 [Cucumis sativus]
Length = 190
Score = 43.1 bits (100), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 44/74 (59%)
Query: 3 VVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKS 62
V V IYN G+S A +V ++D+S+P + F+I G+ +R+ +V+H ++ KS
Sbjct: 45 VSVSIDIYNQGSSTAYDVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKS 104
Query: 63 YGAFNFSFAEVSYK 76
G F+ S A ++++
Sbjct: 105 RGMFHGSPAVITFR 118
Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 42/68 (61%)
Query: 86 IYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAFNF 145
IYN G+S A +V ++D+S+P + F+I G+ +R+ +V+H ++ KS G F+
Sbjct: 51 IYNQGSSTAYDVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSRGMFHG 110
Query: 146 SFAEVSYK 153
S A ++++
Sbjct: 111 SPAVITFR 118
>gi|260833574|ref|XP_002611732.1| hypothetical protein BRAFLDRAFT_98697 [Branchiostoma floridae]
gi|229297103|gb|EEN67742.1| hypothetical protein BRAFLDRAFT_98697 [Branchiostoma floridae]
Length = 981
Score = 42.7 bits (99), Expect = 0.092, Method: Composition-based stats.
Identities = 41/162 (25%), Positives = 68/162 (41%), Gaps = 25/162 (15%)
Query: 25 SSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDY 84
++FPP + + K ++D+V P NV +VQ A K E E
Sbjct: 820 TNFPPYVLAVYSSK-KVMVDQVDPPDNVLADAVVQ----------LALARGKKHEGREGM 868
Query: 85 TIYNIGNSVATNVVVSDSSFP----------PEAFEIQGGQFKF-VIDRVPPQTNVTHVV 133
T Y + + A VVV ++ P E+F + +++ +D VPP VV
Sbjct: 869 TCYYLTHGWAGLVVVVENRHPDRYLQVQCDCKESFNVVSTRWQLRTVDSVPPLHR--QVV 926
Query: 134 IVQPKSYGAFNFSFA-EVSYKASENAEDGDWAAFAFMTLPPL 174
+V + G+F +S + ++ ++ S GDWA P L
Sbjct: 927 VVLSQLEGSFGYSISHKLKHRMSLYPSLGDWAPRGATHFPHL 968
>gi|260833572|ref|XP_002611731.1| hypothetical protein BRAFLDRAFT_98698 [Branchiostoma floridae]
gi|229297102|gb|EEN67741.1| hypothetical protein BRAFLDRAFT_98698 [Branchiostoma floridae]
Length = 345
Score = 42.4 bits (98), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 68/162 (41%), Gaps = 25/162 (15%)
Query: 25 SSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDY 84
++FPP + + K ++D+V P NV +VQ A K E E
Sbjct: 184 TNFPPYVLAVYSSK-KVMVDQVDPPDNVLADAVVQ----------LALARGKKHEGREGM 232
Query: 85 TIYNIGNSVATNVVVSDSSFP----------PEAFEIQGGQFKF-VIDRVPPQTNVTHVV 133
T Y + + A VVV ++ P E+F + +++ +D VPP VV
Sbjct: 233 TCYYLTHGWAGLVVVVENRHPDRYLQVQCDCKESFNVVSTRWQLRTVDSVPPLHR--QVV 290
Query: 134 IVQPKSYGAFNFSFA-EVSYKASENAEDGDWAAFAFMTLPPL 174
+V + G+F +S + ++ ++ S GDWA P L
Sbjct: 291 VVLSQLEGSFGYSISHKLKHRMSLYPSLGDWAPRGATHFPHL 332
>gi|116794106|gb|ABK27008.1| unknown [Picea sitchensis]
Length = 192
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 40/79 (50%)
Query: 3 VVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKS 62
V V +YN G++ A +V + D S+P + F + G F D++ +V+H +++ K
Sbjct: 46 VTVSIDLYNRGSTTAYDVSLIDDSWPSDTFSLVSGNTSFTWDKLDVGASVSHTFVLESKV 105
Query: 63 YGAFNFSFAEVSYKASENA 81
G F A V Y+ + +
Sbjct: 106 KGLFYGRPAVVKYRVAAKS 124
Score = 40.4 bits (93), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 38/73 (52%)
Query: 86 IYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAFNF 145
+YN G++ A +V + D S+P + F + G F D++ +V+H +++ K G F
Sbjct: 52 LYNRGSTTAYDVSLIDDSWPSDTFSLVSGNTSFTWDKLDVGASVSHTFVLESKVKGLFYG 111
Query: 146 SFAEVSYKASENA 158
A V Y+ + +
Sbjct: 112 RPAVVKYRVAAKS 124
>gi|302824685|ref|XP_002993983.1| hypothetical protein SELMODRAFT_138003 [Selaginella moellendorffii]
gi|300138145|gb|EFJ04923.1| hypothetical protein SELMODRAFT_138003 [Selaginella moellendorffii]
Length = 190
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 57/119 (47%), Gaps = 10/119 (8%)
Query: 62 SYGAFNFSFAEVSYKASENAED-----YTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQF 116
S GAF EV K + + ++N G++ A +V + D S+P F + G
Sbjct: 24 SSGAFLLLHKEVQIKRLKPGSERITVSLVVHNAGSTTAYDVSLIDDSWPSSYFNVVSGDT 83
Query: 117 KFVIDRVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYK-ASENAEDGDWAAFAFMTLPPL 174
+++ ++ H +++PK+ G+F + A V Y+ A+++A W+ LPPL
Sbjct: 84 STAWEKLEVGKSLQHSFVLEPKTKGSFQAAPAVVKYRVAAKSALQEAWST----PLPPL 138
Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 41/79 (51%)
Query: 3 VVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKS 62
+ V ++N G++ A +V + D S+P F + G +++ ++ H +++PK+
Sbjct: 47 ITVSLVVHNAGSTTAYDVSLIDDSWPSSYFNVVSGDTSTAWEKLEVGKSLQHSFVLEPKT 106
Query: 63 YGAFNFSFAEVSYKASENA 81
G+F + A V Y+ + +
Sbjct: 107 KGSFQAAPAVVKYRVAAKS 125
>gi|302794662|ref|XP_002979095.1| hypothetical protein SELMODRAFT_109700 [Selaginella moellendorffii]
gi|300153413|gb|EFJ20052.1| hypothetical protein SELMODRAFT_109700 [Selaginella moellendorffii]
Length = 190
Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 56/117 (47%), Gaps = 10/117 (8%)
Query: 64 GAFNFSFAEVSYKASENAED-----YTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKF 118
GAF EV K + + ++N G++ A +V + D S+P F + G
Sbjct: 26 GAFLLLHKEVQIKRLKPGSERITVSLVVHNAGSTTAYDVSLIDDSWPSSYFNVVSGDTST 85
Query: 119 VIDRVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYK-ASENAEDGDWAAFAFMTLPPL 174
+++ ++ H +++PK+ G+F + A V Y+ A+++A W+ LPPL
Sbjct: 86 AWEKLEVGKSLQHSFVLEPKTKGSFQAAPAVVKYRVAAKSALQEAWST----PLPPL 138
Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 41/79 (51%)
Query: 3 VVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKS 62
+ V ++N G++ A +V + D S+P F + G +++ ++ H +++PK+
Sbjct: 47 ITVSLVVHNAGSTTAYDVSLIDDSWPSSYFNVVSGDTSTAWEKLEVGKSLQHSFVLEPKT 106
Query: 63 YGAFNFSFAEVSYKASENA 81
G+F + A V Y+ + +
Sbjct: 107 KGSFQAAPAVVKYRVAAKS 125
>gi|330831757|ref|XP_003291923.1| hypothetical protein DICPUDRAFT_82569 [Dictyostelium purpureum]
gi|325077867|gb|EGC31552.1| hypothetical protein DICPUDRAFT_82569 [Dictyostelium purpureum]
Length = 184
Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 46/82 (56%)
Query: 5 VKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYG 64
+++ IYN+G+ A +V D+ F F+I GQ + + + P + V + V+PK G
Sbjct: 43 IQFIIYNVGSDPAYDVSFIDNDFISADFDIISGQTEGKWETLAPGSQVQTNLTVEPKKSG 102
Query: 65 AFNFSFAEVSYKASENAEDYTI 86
++ + ++Y+ S++ ++T+
Sbjct: 103 IYSLTSTVLNYRKSQHDSEFTV 124
Score = 36.2 bits (82), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 40/74 (54%)
Query: 84 YTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAF 143
+ IYN+G+ A +V D+ F F+I GQ + + + P + V + V+PK G +
Sbjct: 45 FIIYNVGSDPAYDVSFIDNDFISADFDIISGQTEGKWETLAPGSQVQTNLTVEPKKSGIY 104
Query: 144 NFSFAEVSYKASEN 157
+ + ++Y+ S++
Sbjct: 105 SLTSTVLNYRKSQH 118
>gi|351724837|ref|NP_001238351.1| uncharacterized protein LOC100306406 precursor [Glycine max]
gi|255628433|gb|ACU14561.1| unknown [Glycine max]
Length = 194
Score = 40.0 bits (92), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 39/79 (49%)
Query: 3 VVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKS 62
V V IYN G S A +V +SD S+P +AF++ G +R+ ++H ++ KS
Sbjct: 49 VSVTIDIYNQGTSTAYDVSLSDDSWPSDAFDVISGSTSKSWERLDAGGIISHTFELEAKS 108
Query: 63 YGAFNFSFAEVSYKASENA 81
G F A + ++ A
Sbjct: 109 KGVFAGEPAVIKFRVPTKA 127
Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 37/73 (50%)
Query: 86 IYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAFNF 145
IYN G S A +V +SD S+P +AF++ G +R+ ++H ++ KS G F
Sbjct: 55 IYNQGTSTAYDVSLSDDSWPSDAFDVISGSTSKSWERLDAGGIISHTFELEAKSKGVFAG 114
Query: 146 SFAEVSYKASENA 158
A + ++ A
Sbjct: 115 EPAVIKFRVPTKA 127
>gi|384249705|gb|EIE23186.1| hypothetical protein COCSUDRAFT_66208 [Coccomyxa subellipsoidea
C-169]
Length = 228
Score = 39.7 bits (91), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 47/103 (45%), Gaps = 1/103 (0%)
Query: 86 IYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAFNF 145
+YN G S A VVV+D + E FE ++R+P V + P G+
Sbjct: 69 LYNAGKSAAYEVVVTDGEWQSEYFEFDPEAMVETVERIPAGATVRVEFTLIPVKVGSGIT 128
Query: 146 SFAEVSYKASENAEDGDWAAFAFMTLPPLLIPFLLWFQSKTKY 188
+ A+++YK E A++ A M L ++ PF ++ ++
Sbjct: 129 APAQITYKLEEGAKNLQTAVSTTMRL-AIITPFRVFLSKALRW 170
Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 5/99 (5%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 61
+ V +YN G S A VVV+D + E FE ++R+P V + P
Sbjct: 62 NTTVAIELYNAGKSAAYEVVVTDGEWQSEYFEFDPEAMVETVERIPAGATVRVEFTLIPV 121
Query: 62 SYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVS 100
G+ + A+++YK E A+ N+ +V+T + ++
Sbjct: 122 KVGSGITAPAQITYKLEEGAK-----NLQTAVSTTMRLA 155
>gi|241952937|ref|XP_002419190.1| putative zinc metalloproteinase, putative [Candida dubliniensis
CD36]
gi|223642530|emb|CAX42779.1| putative zinc metalloproteinase, putative [Candida dubliniensis
CD36]
Length = 738
Score = 39.3 bits (90), Expect = 0.90, Method: Composition-based stats.
Identities = 27/71 (38%), Positives = 31/71 (43%), Gaps = 6/71 (8%)
Query: 104 FPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAF--NFSFAEVSYKASENAEDG 161
FPP+ FE+ G FK +I P + NV V I S F NF FAE S N D
Sbjct: 43 FPPQYFEVNNGNFKAIIHVSPGERNVFQVDI----SDNGFINNFGFAEYSNGRRPNVVDS 98
Query: 162 DWAAFAFMTLP 172
F LP
Sbjct: 99 GTLTLYFNPLP 109
>gi|154417205|ref|XP_001581623.1| hypothetical protein [Trichomonas vaginalis G3]
gi|154417211|ref|XP_001581626.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121915852|gb|EAY20637.1| hypothetical protein TVAG_163330 [Trichomonas vaginalis G3]
gi|121915855|gb|EAY20640.1| hypothetical protein TVAG_163360 [Trichomonas vaginalis G3]
Length = 187
Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 58/157 (36%), Gaps = 26/157 (16%)
Query: 55 VVIVQPKS--YGAFNFSFAEVSYKASENAEDY-TIYNIGNSVATNVVVSDSSFPPEAFEI 111
+++ Q KS + F+ + VS K E Y I N G+S T++ + ++ P EA+
Sbjct: 19 LLLTQIKSAPFIVFDKKLSSVSGKVGEPINCYYVIINQGDSTVTDLSIVENGIPSEAWSF 78
Query: 112 QGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAFNFS---------------------FAEV 150
G + P N+TH+ + P G F E+
Sbjct: 79 SGDSSILSWKSLKPGENITHIFPITPTKSGNLQIMPSTMIYYDGNEKQKHLSSMIPFIEI 138
Query: 151 --SYKASENAEDGDWAAFAFMTLPPLLIPFLLWFQSK 185
S A + F +L+P LLW+ S+
Sbjct: 139 KGSRSIGARANLQGYCLFIVAAASSVLVPLLLWWVSR 175
>gi|351725945|ref|NP_001236342.1| uncharacterized protein LOC100500066 precursor [Glycine max]
gi|255628939|gb|ACU14814.1| unknown [Glycine max]
Length = 194
Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 3 VVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKS 62
V V I+N G S A +V +SD S+P +AF++ G +R+ ++H ++ KS
Sbjct: 49 VSVTIDIFNQGTSTAYDVSLSDDSWPSDAFDVISGSTSKSWERLDAGGILSHTFELEAKS 108
Query: 63 YGAF 66
G F
Sbjct: 109 KGVF 112
Score = 37.0 bits (84), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%)
Query: 86 IYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAF 143
I+N G S A +V +SD S+P +AF++ G +R+ ++H ++ KS G F
Sbjct: 55 IFNQGTSTAYDVSLSDDSWPSDAFDVISGSTSKSWERLDAGGILSHTFELEAKSKGVF 112
>gi|350288851|gb|EGZ70076.1| hypothetical protein NEUTE2DRAFT_130100 [Neurospora tetrasperma
FGSC 2509]
Length = 282
Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
Query: 161 GDWAAFAFMTLP--PLLIPFLLWFQSKTKYEKLAG 193
G W++ + P P L+P LLWF+ TKY+++AG
Sbjct: 212 GSWSSAELLGFPNGPALLPTLLWFRDATKYDEMAG 246
>gi|255726434|ref|XP_002548143.1| hypothetical protein CTRG_02440 [Candida tropicalis MYA-3404]
gi|240134067|gb|EER33622.1| hypothetical protein CTRG_02440 [Candida tropicalis MYA-3404]
Length = 725
Score = 37.4 bits (85), Expect = 3.8, Method: Composition-based stats.
Identities = 22/81 (27%), Positives = 34/81 (41%)
Query: 65 AFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVP 124
+FN+ E+ + T + V + V + FPP+ FE+ GQFK ++ P
Sbjct: 4 SFNYQNNEIVSSPTVIVSGSTSTGLAKGVISFVNNDNKVFPPQYFEVNNGQFKAIVHVSP 63
Query: 125 PQTNVTHVVIVQPKSYGAFNF 145
+ NV V I F F
Sbjct: 64 NENNVFKVEISDNGYINQFGF 84
>gi|224129228|ref|XP_002328922.1| predicted protein [Populus trichocarpa]
gi|222839352|gb|EEE77689.1| predicted protein [Populus trichocarpa]
Length = 183
Score = 37.0 bits (84), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 40/79 (50%)
Query: 3 VVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKS 62
V V IYN G+S A ++ ++D +P + F++ G DR+ ++H ++ K
Sbjct: 39 VSVSIDIYNQGSSTAYDITLTDDHWPKDIFDVVSGNTSQSWDRLDAGGLLSHAFELEGKV 98
Query: 63 YGAFNFSFAEVSYKASENA 81
G F+ S A ++++ A
Sbjct: 99 KGMFHGSPAVITFRIPTKA 117
Score = 36.2 bits (82), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 38/73 (52%)
Query: 86 IYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAFNF 145
IYN G+S A ++ ++D +P + F++ G DR+ ++H ++ K G F+
Sbjct: 45 IYNQGSSTAYDITLTDDHWPKDIFDVVSGNTSQSWDRLDAGGLLSHAFELEGKVKGMFHG 104
Query: 146 SFAEVSYKASENA 158
S A ++++ A
Sbjct: 105 SPAVITFRIPTKA 117
>gi|308798779|ref|XP_003074169.1| translocon-associated protein beta (ISS) [Ostreococcus tauri]
gi|116000341|emb|CAL50021.1| translocon-associated protein beta (ISS) [Ostreococcus tauri]
Length = 232
Score = 37.0 bits (84), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 2/83 (2%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQ--FKFVIDRVPPQTNVTHVVIVQ 59
++ V ++ N G + A V V D AFE+ G + + P V + V
Sbjct: 60 NLTVTVSLVNAGTAEARKVRVRDDGLDASAFELIGEKDALSATYATLAPGERVEYAYTVV 119
Query: 60 PKSYGAFNFSFAEVSYKASENAE 82
PK+ G+F S A VSY + E
Sbjct: 120 PKTSGSFKASAASVSYLGTSGRE 142
>gi|118484599|gb|ABK94173.1| unknown [Populus trichocarpa]
Length = 196
Score = 36.6 bits (83), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 40/79 (50%)
Query: 3 VVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKS 62
V V IYN G+S A ++ ++D +P + F++ G DR+ ++H ++ K
Sbjct: 50 VSVSIDIYNQGSSTAYDITLTDDHWPKDIFDVVSGNTSQSWDRLDAGGLLSHAFELEGKV 109
Query: 63 YGAFNFSFAEVSYKASENA 81
G F+ S A ++++ A
Sbjct: 110 KGMFHGSPAVITFRIPTKA 128
Score = 35.8 bits (81), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 38/73 (52%)
Query: 86 IYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAFNF 145
IYN G+S A ++ ++D +P + F++ G DR+ ++H ++ K G F+
Sbjct: 56 IYNQGSSTAYDITLTDDHWPKDIFDVVSGNTSQSWDRLDAGGLLSHAFELEGKVKGMFHG 115
Query: 146 SFAEVSYKASENA 158
S A ++++ A
Sbjct: 116 SPAVITFRIPTKA 128
>gi|268637986|ref|XP_641369.2| translocon-associated protein subunit beta [Dictyostelium
discoideum AX4]
gi|182691581|sp|Q54VI6.2|SSRB_DICDI RecName: Full=Translocon-associated protein subunit beta;
Short=TRAP-beta; AltName: Full=Signal sequence receptor
subunit beta; Short=SSR-beta; Flags: Precursor
gi|256012964|gb|EAL67383.2| translocon-associated protein subunit beta [Dictyostelium
discoideum AX4]
Length = 184
Score = 36.6 bits (83), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 18/82 (21%), Positives = 43/82 (52%)
Query: 5 VKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYG 64
+++ IYN+G+ A ++ D+ F FE G + + + P + V + V PK G
Sbjct: 44 IQFIIYNVGSEPAYDISFIDNDFSNAEFEFVSGSSEGKWETLAPNSQVQTNLTVIPKKSG 103
Query: 65 AFNFSFAEVSYKASENAEDYTI 86
++ + ++Y+ ++ + ++T+
Sbjct: 104 IYSLTSTVLNYRKTQTSSEFTV 125
>gi|238880677|gb|EEQ44315.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 743
Score = 36.2 bits (82), Expect = 7.0, Method: Composition-based stats.
Identities = 28/109 (25%), Positives = 42/109 (38%), Gaps = 4/109 (3%)
Query: 65 AFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVP 124
+FN+ E+ + T+ + V + + FPP+ FE+ G FK +I P
Sbjct: 4 SFNYQNNEIVSSPTVIVSGSTLTRLYRGVVSFTNNQNKVFPPQYFEVNNGHFKAIIHVSP 63
Query: 125 PQTNVTHVVIVQPKSYGAFN-FSFAEVSYKASENAEDGDWAAFAFMTLP 172
+ N+ V I G N F F E N D +F LP
Sbjct: 64 GERNIFQVDI---SDNGYINDFGFVEYGNGRRPNIVDSGSLTLSFNPLP 109
>gi|9757784|dbj|BAB08282.1| unnamed protein product [Arabidopsis thaliana]
Length = 193
Score = 36.2 bits (82), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 41/74 (55%)
Query: 3 VVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKS 62
V V Y IYN G+S A +V ++D+S+ + FE+ G +R+ ++H + ++ K
Sbjct: 49 VSVSYDIYNQGSSSAYDVTLTDNSWDKKTFEVVNGNTSKSWERLDAGGILSHSIELEAKV 108
Query: 63 YGAFNFSFAEVSYK 76
G F + A V+++
Sbjct: 109 KGVFYGAPAVVTFR 122
>gi|18417271|ref|NP_568293.1| translocon-associated protein subunit beta [Arabidopsis thaliana]
gi|186522719|ref|NP_001119221.1| translocon-associated protein subunit beta [Arabidopsis thaliana]
gi|186522723|ref|NP_001119222.1| translocon-associated protein subunit beta [Arabidopsis thaliana]
gi|186522727|ref|NP_001119223.1| translocon-associated protein subunit beta [Arabidopsis thaliana]
gi|14517446|gb|AAK62613.1| AT5g14030/MUA22_2 [Arabidopsis thaliana]
gi|21553748|gb|AAM62841.1| unknown [Arabidopsis thaliana]
gi|22136544|gb|AAM91058.1| AT5g14030/MUA22_2 [Arabidopsis thaliana]
gi|332004593|gb|AED91976.1| translocon-associated protein subunit beta [Arabidopsis thaliana]
gi|332004594|gb|AED91977.1| translocon-associated protein subunit beta [Arabidopsis thaliana]
gi|332004595|gb|AED91978.1| translocon-associated protein subunit beta [Arabidopsis thaliana]
gi|332004596|gb|AED91979.1| translocon-associated protein subunit beta [Arabidopsis thaliana]
Length = 195
Score = 36.2 bits (82), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 41/74 (55%)
Query: 3 VVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKS 62
V V Y IYN G+S A +V ++D+S+ + FE+ G +R+ ++H + ++ K
Sbjct: 49 VSVSYDIYNQGSSSAYDVTLTDNSWDKKTFEVVNGNTSKSWERLDAGGILSHSIELEAKV 108
Query: 63 YGAFNFSFAEVSYK 76
G F + A V+++
Sbjct: 109 KGVFYGAPAVVTFR 122
>gi|440795454|gb|ELR16574.1| transloconassociated protein subunit beta, putative [Acanthamoeba
castellanii str. Neff]
Length = 191
Score = 35.8 bits (81), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 3 VVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKS 62
VVVK I+N G + A +V + D + + F+++ G D++ P NV+H +VQPK+
Sbjct: 40 VVVKINIFNTGKTSAYDVELFDQDWL-KNFDVKVGIPTATWDKIAPGQNVSHYFVVQPKA 98
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.133 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,164,176,834
Number of Sequences: 23463169
Number of extensions: 119642568
Number of successful extensions: 244225
Number of sequences better than 100.0: 240
Number of HSP's better than 100.0 without gapping: 198
Number of HSP's successfully gapped in prelim test: 42
Number of HSP's that attempted gapping in prelim test: 243570
Number of HSP's gapped (non-prelim): 627
length of query: 201
length of database: 8,064,228,071
effective HSP length: 135
effective length of query: 66
effective length of database: 9,191,667,552
effective search space: 606650058432
effective search space used: 606650058432
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 73 (32.7 bits)