Query psy4599
Match_columns 201
No_of_seqs 141 out of 172
Neff 5.0
Searched_HMMs 29240
Date Fri Aug 16 21:01:47 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4599.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/4599hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3idu_A Uncharacterized protein 95.0 0.24 8.1E-06 38.3 10.2 61 2-72 34-96 (127)
2 2l0d_A Cell surface protein; s 92.2 1 3.4E-05 34.3 9.0 59 2-71 20-83 (114)
3 3idu_A Uncharacterized protein 88.5 2.2 7.4E-05 32.9 8.0 57 82-148 37-95 (127)
4 1iuz_A Plastocyanin; electron 81.0 2.7 9.3E-05 29.6 5.1 80 54-145 2-81 (98)
5 3hrz_B Cobra venom factor; ser 80.8 9.2 0.00031 32.1 9.1 65 3-70 98-164 (252)
6 3erx_A Pseudoazurin; copper pr 79.3 7.6 0.00026 29.3 7.4 74 53-145 2-76 (123)
7 2x3c_A Toxic extracellular end 78.9 2.7 9.4E-05 37.3 5.4 57 2-59 37-110 (343)
8 3isy_A Bsupi, intracellular pr 78.1 21 0.00071 27.2 10.0 96 33-147 1-99 (120)
9 1pmy_A Pseudoazurin; electron 77.9 6.5 0.00022 29.5 6.6 83 53-163 2-85 (123)
10 2kut_A Uncharacterized protein 77.4 3 0.0001 32.1 4.6 64 2-71 17-91 (122)
11 2xzz_A Protein-glutamine gamma 75.7 3.3 0.00011 30.6 4.2 61 2-68 21-81 (102)
12 2ux6_A Pseudoazurin; type-1 co 75.7 9.1 0.00031 28.6 6.8 73 53-144 2-75 (122)
13 3isy_A Bsupi, intracellular pr 73.6 18 0.00061 27.6 8.1 67 2-70 19-99 (120)
14 1b3i_A PETE protein, protein ( 72.2 7.5 0.00026 26.9 5.3 79 53-145 2-80 (97)
15 3ef4_A Pseudoazurin, blue copp 72.1 8.3 0.00028 29.3 5.9 80 53-160 2-83 (124)
16 2l0d_A Cell surface protein; s 71.2 20 0.00067 27.0 7.7 58 82-148 23-83 (114)
17 3tu6_A Pseudoazurin (blue copp 69.8 7.3 0.00025 29.6 5.1 78 53-156 3-82 (127)
18 1paz_A Pseudoazurin precursor; 69.6 14 0.00049 27.6 6.7 81 53-161 2-83 (123)
19 2ys4_A Hydrocephalus-inducing 65.6 16 0.00056 26.7 6.2 57 82-148 45-101 (122)
20 2xzz_A Protein-glutamine gamma 62.8 3.7 0.00013 30.3 2.1 32 116-147 52-83 (102)
21 3cfu_A Uncharacterized lipopro 62.5 19 0.00064 28.4 6.3 56 3-59 49-111 (159)
22 2qsv_A Uncharacterized protein 61.7 61 0.0021 26.0 12.1 58 82-149 138-202 (220)
23 1vjj_A Protein-glutamine gluta 56.8 21 0.00072 34.8 6.7 63 2-69 609-671 (692)
24 2plt_A Plastocyanin; electron 55.8 17 0.00058 25.0 4.5 72 63-145 10-81 (98)
25 1pcs_A Plastocyanin; electron 55.4 14 0.00049 25.4 4.1 79 54-145 3-81 (98)
26 3hrz_B Cobra venom factor; ser 55.4 32 0.0011 28.7 6.9 64 82-148 100-165 (252)
27 2x3c_A Toxic extracellular end 55.2 16 0.00053 32.4 5.2 68 79-146 37-124 (343)
28 2qsv_A Uncharacterized protein 55.1 80 0.0027 25.3 13.9 114 3-138 21-145 (220)
29 3gin_A Sodium/calcium exchange 55.0 74 0.0025 24.9 9.1 92 14-116 8-114 (160)
30 4hci_A Cupredoxin 1; structura 54.9 19 0.00066 25.1 4.8 39 18-59 16-55 (100)
31 2q3z_A Transglutaminase 2; tra 54.7 59 0.002 31.7 9.4 141 1-147 487-666 (687)
32 2gim_A Plastocyanin; beta shee 54.4 12 0.0004 26.2 3.5 83 53-146 3-89 (106)
33 3c75_A Amicyanin; copper prote 53.3 21 0.00072 26.7 5.0 65 64-145 53-117 (132)
34 1plc_A Plastocyanin; electron 52.2 16 0.00055 25.3 3.9 72 63-145 9-82 (99)
35 1ex0_A Coagulation factor XIII 51.2 37 0.0013 33.3 7.5 62 2-69 645-706 (731)
36 2aan_A Auracyanin A; cupredoxi 50.2 24 0.00081 26.2 4.8 50 50-101 15-64 (139)
37 1iuz_A Plastocyanin; electron 50.1 37 0.0013 23.5 5.6 12 45-56 62-73 (98)
38 2ys4_A Hydrocephalus-inducing 48.6 74 0.0025 23.0 8.3 61 4-75 44-104 (122)
39 2cal_A Rusticyanin; iron respi 47.9 48 0.0016 25.5 6.4 62 4-68 70-135 (154)
40 2q3z_A Transglutaminase 2; tra 47.9 28 0.00094 34.0 5.9 63 2-69 602-665 (687)
41 3rfr_A PMOB; membrane, oxidore 47.8 34 0.0012 31.4 6.2 57 1-59 298-367 (419)
42 2e6j_A Hydin protein; PAPD, st 46.9 71 0.0024 22.3 8.1 63 80-148 28-91 (112)
43 2kut_A Uncharacterized protein 45.8 19 0.00065 27.5 3.7 62 83-148 21-91 (122)
44 2iaa_C Azurin; quinoprotein, t 44.9 21 0.00073 27.0 3.8 60 4-64 27-104 (128)
45 1bxv_A Plastocyanin; copper pr 44.7 50 0.0017 22.0 5.5 72 54-145 3-74 (91)
46 1id2_A Amicyanin; beta barrel, 43.8 36 0.0012 24.2 4.8 38 18-59 22-59 (106)
47 1z9l_A Vesicle-associated memb 41.0 78 0.0027 23.3 6.5 64 66-138 11-79 (128)
48 1byp_A Protein (plastocyanin); 40.6 8.9 0.0003 26.6 1.0 74 63-145 9-82 (99)
49 2ov0_A Amicyanin; beta-sandwic 40.2 45 0.0015 23.5 4.8 65 64-145 26-90 (105)
50 1row_A SSP-19, MSP-domain prot 40.0 64 0.0022 23.7 5.7 59 70-137 7-66 (109)
51 1vjj_A Protein-glutamine gluta 38.9 2.5E+02 0.0087 27.3 11.1 141 1-148 496-673 (692)
52 2aan_A Auracyanin A; cupredoxi 38.3 56 0.0019 24.1 5.3 21 46-68 101-121 (139)
53 4acq_A Alpha-2-macroglobulin; 37.4 89 0.0031 32.5 8.2 68 2-72 784-851 (1451)
54 1g0d_A Protein-glutamine gamma 36.9 50 0.0017 32.2 5.9 62 2-69 600-662 (695)
55 2cri_A Vesicle-associated memb 36.8 1.1E+02 0.0039 23.1 7.0 65 66-139 15-84 (147)
56 1bw3_A Barwin, basic barley SE 36.8 48 0.0016 25.5 4.7 41 7-47 67-122 (125)
57 3ay2_A Lipid modified azurin p 35.7 25 0.00085 28.0 3.0 90 53-145 42-148 (167)
58 4fxk_B Complement C4-A alpha c 35.1 64 0.0022 30.7 6.3 65 3-70 170-234 (767)
59 1m1s_A WR4; structural genomic 34.4 1.2E+02 0.004 22.7 6.5 64 66-138 11-75 (116)
60 1cuo_A Protein (azurin ISO-2); 33.7 78 0.0027 23.7 5.4 38 64-101 11-52 (129)
61 1r4x_A Gamma1-COP, coatomer ga 33.7 1.4E+02 0.0046 25.8 7.6 122 2-140 59-197 (275)
62 3c75_A Amicyanin; copper prote 32.0 67 0.0023 23.8 4.8 38 18-59 48-85 (132)
63 3prx_B Cobra venom factor; imm 31.0 1.5E+02 0.0052 31.4 8.7 66 2-70 829-896 (1642)
64 1pzd_A Coatomer gamma subunit; 30.4 2.7E+02 0.0094 24.2 9.7 120 2-140 106-244 (322)
65 1yew_A Particulate methane mon 30.2 1.2E+02 0.0041 27.5 6.8 58 1-59 264-335 (382)
66 2hr0_B Complement C3 alpha' ch 29.6 1.8E+02 0.0063 28.3 8.7 67 2-70 96-164 (915)
67 2ccw_A Azurin II, AZN-2; elect 29.4 35 0.0012 25.7 2.8 21 4-24 28-52 (129)
68 3qbt_B Inositol polyphosphate 29.2 1.1E+02 0.0039 23.0 5.8 51 3-59 45-99 (140)
69 2b39_A C3; thioester, immune d 28.5 2E+02 0.0067 30.2 9.0 66 3-70 844-911 (1661)
70 1qr4_A Protein (tenascin); fib 28.3 1.7E+02 0.0058 21.2 15.0 46 15-62 34-79 (186)
71 3qbt_B Inositol polyphosphate 27.5 1E+02 0.0035 23.3 5.2 52 81-137 46-100 (140)
72 2x41_A Beta-glucosidase; hydro 27.5 89 0.003 30.1 5.9 79 65-144 602-683 (721)
73 1nwp_A Azurin; electron transp 26.7 45 0.0015 25.1 3.0 21 4-24 28-52 (128)
74 1iby_A Nitrosocyanin; RED copp 25.7 1.7E+02 0.0058 20.3 10.5 64 64-146 31-94 (112)
75 3ef4_A Pseudoazurin, blue copp 25.5 76 0.0026 23.8 4.0 11 46-56 59-69 (124)
76 3zyz_A Beta-D-glucoside glucoh 25.5 1.8E+02 0.0061 28.1 7.6 62 3-67 615-680 (713)
77 1msp_A MSP, major sperm protei 24.9 2.1E+02 0.0072 21.1 7.7 70 62-140 5-79 (126)
78 2e6j_A Hydin protein; PAPD, st 23.6 1.8E+02 0.0063 20.0 8.7 61 3-69 28-89 (112)
79 3ead_A Na/Ca exchange protein; 23.5 2.3E+02 0.0078 21.0 7.6 78 65-158 53-133 (137)
80 4djm_A DRAB; chaperone, PILI; 22.0 2.9E+02 0.0099 22.8 7.4 71 58-134 16-89 (239)
81 3gfu_C Chaperone protein FAEE; 21.0 3.2E+02 0.011 22.5 7.4 64 66-134 2-69 (224)
82 1ex0_A Coagulation factor XIII 20.8 6E+02 0.021 24.9 12.7 59 88-148 641-708 (731)
83 2b3r_A Phosphatidylinositol-4- 20.7 1.2E+02 0.004 21.9 4.2 46 93-141 88-134 (134)
No 1
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=95.02 E-value=0.24 Score=38.34 Aligned_cols=61 Identities=11% Similarity=0.117 Sum_probs=43.7
Q ss_pred ceEEEEEEEEcCccceee--EEEecCCCCCCCceEecCeeeeeEeeeCCCCceEEEEEEEeceeeeEEeeeEE
Q psy4599 2 DVVVKYTIYNIGNSVATN--VVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAFNFSFAE 72 (201)
Q Consensus 2 d~tV~y~IyNvG~s~A~d--V~l~D~~fp~~~F~iv~G~~~~~~~ri~pg~nvsH~~vv~p~~~G~fn~t~A~ 72 (201)
.++++.++-|.|+.+|.+ |+|..|+ ++++ ... -.|+||+..+-.|-..|...|.|++.+-+
T Consensus 34 ~~ti~vtV~N~G~~~a~~~~V~lyvng------~~v~-t~~---v~La~G~s~tv~f~~~~~~~G~~~v~AvV 96 (127)
T 3idu_A 34 LAEYEVHVKNLGGIGVPSTKVRVYING------TLYK-NWT---VSLGPKEEKVLTFNWTPTQEGMYRINATV 96 (127)
T ss_dssp CEEEEEEEEECSSSCEEEEEEEEEETT------EEEE-EEE---EEECTTCEEEEEEEECCSSCEEEEEEEEE
T ss_pred EEEEEEEEEECCCCccCCcEEEEEECC------EEEe-eEE---eccCCCCeEEEEEEEEcCCCcEEEEEEEE
Confidence 578999999999876555 4444431 1222 222 24999999999999999999999887643
No 2
>2l0d_A Cell surface protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Methanosarcina acetivorans}
Probab=92.22 E-value=1 Score=34.25 Aligned_cols=59 Identities=14% Similarity=0.125 Sum_probs=43.6
Q ss_pred ceEEEEEEEEcCcc--ceeeEEEecCCCCCCCceEecCee--eeeEeeeCCCCceEEEEEEEec-eeeeEEeeeE
Q psy4599 2 DVVVKYTIYNIGNS--VATNVVVSDSSFPPEAFEIQGGQF--KFVIDRVPPQTNVTHVVIVQPK-SYGAFNFSFA 71 (201)
Q Consensus 2 d~tV~y~IyNvG~s--~A~dV~l~D~~fp~~~F~iv~G~~--~~~~~ri~pg~nvsH~~vv~p~-~~G~fn~t~A 71 (201)
.++|+.+|-|+|.. .+..|.|..| |.. ......|++|++.+=.|...|. ..|.|.+++.
T Consensus 20 ~~ti~atVkN~G~~~a~~~~V~ly~~-----------g~~v~t~~v~~LaaG~s~tv~~~w~~~~~~G~ytl~a~ 83 (114)
T 2l0d_A 20 VNTMTATIENQGNKDSTSFNVSLLVD-----------GIVVDTQTVTSLESENSTNVDFHWTLDGTANSYTLTVN 83 (114)
T ss_dssp EEEEEEEEEECSSSCBCCEEEEEEET-----------TEEEEEEEESCBCBTCEEEEEEEEECCCSCSEEEEEEE
T ss_pred eEEEEEEEEECCCCCCCCEEEEEEEC-----------CEEEcceecccccCCCEEEEEEEEeecCcCceEEEEEE
Confidence 47899999999987 4555665543 433 2245569999998888888888 4898888764
No 3
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=88.49 E-value=2.2 Score=32.85 Aligned_cols=57 Identities=11% Similarity=0.167 Sum_probs=39.2
Q ss_pred ceeEEEecccceeeeE--EEecCCCCCCceEEecCceeeeeeeeCCCCceEEEEEEeeeecceeeeeee
Q psy4599 82 EDYTIYNIGNSVATNV--VVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAFNFSFA 148 (201)
Q Consensus 82 ~~y~IyNvG~s~A~dV--~l~D~sfp~~~F~iv~G~~s~~~~rI~pg~nvsH~~vv~p~~~G~fn~t~A 148 (201)
...++.|.|..+|.+. .|..++ +++ +...+ .|+||+..+-+|...|...|.|++..-
T Consensus 37 i~vtV~N~G~~~a~~~~V~lyvng------~~v-~t~~v---~La~G~s~tv~f~~~~~~~G~~~v~Av 95 (127)
T 3idu_A 37 YEVHVKNLGGIGVPSTKVRVYING------TLY-KNWTV---SLGPKEEKVLTFNWTPTQEGMYRINAT 95 (127)
T ss_dssp EEEEEEECSSSCEEEEEEEEEETT------EEE-EEEEE---EECTTCEEEEEEEECCSSCEEEEEEEE
T ss_pred EEEEEEECCCCccCCcEEEEEECC------EEE-eeEEe---ccCCCCeEEEEEEEEcCCCcEEEEEEE
Confidence 4677889998765544 444432 122 22222 499999999999999999999988664
No 4
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=80.96 E-value=2.7 Score=29.58 Aligned_cols=80 Identities=15% Similarity=0.257 Sum_probs=47.7
Q ss_pred EEEEEEeceeeeEEeeeEEEEEEeCCCCceeEEEecccceeeeEEEecCCCCCCceEEecCceeeeeeeeCCCCceEEEE
Q psy4599 54 HVVIVQPKSYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVV 133 (201)
Q Consensus 54 H~~vv~p~~~G~fn~t~A~VtY~~s~~a~~y~IyNvG~s~A~dV~l~D~sfp~~~F~iv~G~~s~~~~rI~pg~nvsH~~ 133 (201)
|.|.|. ...|.+.|.|+.|+=+.. ..+++.|.+. ..=+|.+.+..+|. .|+ .+.++..=..++||...+++|
T Consensus 2 ~~V~m~-~~~~~~~F~P~~i~v~~G---dtV~~~n~~~-~~H~v~~~~~~~p~-g~~--~~~~~~~~~~~~~g~~~~~tf 73 (98)
T 1iuz_A 2 QIVKLG-GDDGSLAFVPSKISVAAG---EAIEFVNNAG-FPHNIVFDEDAVPA-GVD--ADAISYDDYLNSKGETVVRKL 73 (98)
T ss_dssp EEEEES-CTTSCCSEESSEEEECTT---CEEEEEECSS-CCEEEEECTTSSCT-TCC--HHHHCEEEEECSTTCEEEEEC
T ss_pred EEEEEe-cCCCCcEEeCCEEEECCC---CEEEEEECCC-CCEEEEEeCCCCcc-ccc--cccccccccccCCCCEEEEEc
Confidence 445552 123578999998876543 3678889864 45667777666663 332 122221112688999887766
Q ss_pred EEeeeecceeee
Q psy4599 134 IVQPKSYGAFNF 145 (201)
Q Consensus 134 vv~p~~~G~fn~ 145 (201)
.+.|.|.+
T Consensus 74 ----~~~G~y~y 81 (98)
T 1iuz_A 74 ----STPGVYGV 81 (98)
T ss_dssp ----CSCEEEEE
T ss_pred ----CCCEEEEE
Confidence 46675533
No 5
>3hrz_B Cobra venom factor; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Naja kaouthia} PDB: 3frp_G* 3hs0_B*
Probab=80.81 E-value=9.2 Score=32.05 Aligned_cols=65 Identities=15% Similarity=0.020 Sum_probs=46.0
Q ss_pred eEEEEEEEEcCccceeeEEEecCCCCCCCceEecC--eeeeeEeeeCCCCceEEEEEEEeceeeeEEeee
Q psy4599 3 VVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGG--QFKFVIDRVPPQTNVTHVVIVQPKSYGAFNFSF 70 (201)
Q Consensus 3 ~tV~y~IyNvG~s~A~dV~l~D~~fp~~~F~iv~G--~~~~~~~ri~pg~nvsH~~vv~p~~~G~fn~t~ 70 (201)
+.+..++||-.+.. .+|++.=. ..+.|..... ....+.-.|++|+..+..+.|+|++-|..+++-
T Consensus 98 ~~l~~~V~Ny~~~~-~~v~V~l~--~~~~~~~~~~~~~~~~~~v~v~a~~~~~v~f~i~p~~~G~~~i~v 164 (252)
T 3hrz_B 98 VEIRAILHNYVNED-IYVRVELL--YNPAFCSASTKGQRYRQQFPIKALSSRAVPFVIVPLEQGLHDVEI 164 (252)
T ss_dssp EEEEEEEEECSSSC-EEEEEEEC--CCTTEEESCCSSCCEEEEEEECTTEEEEEEEEEEECSSEEEEEEE
T ss_pred EEEEEEEEcccCce-EEEEEEEE--cCCceEeecCCCCceEEEEEECCCCeEEEEEEEEeccCCcEEEEE
Confidence 67899999998754 44444321 1245766542 223445679999999999999999999877653
No 6
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=79.33 E-value=7.6 Score=29.29 Aligned_cols=74 Identities=19% Similarity=0.150 Sum_probs=46.7
Q ss_pred EEEEEEEe-ceeeeEEeeeEEEEEEeCCCCceeEEEecccceeeeEEEecCCCCCCceEEecCceeeeeeeeCCCCceEE
Q psy4599 53 THVVIVQP-KSYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTH 131 (201)
Q Consensus 53 sH~~vv~p-~~~G~fn~t~A~VtY~~s~~a~~y~IyNvG~s~A~dV~l~D~sfp~~~F~iv~G~~s~~~~rI~pg~nvsH 131 (201)
+|.|.|.- -..|.+.|.|+.|+=+.. ..++..|... .-+|.+.+..+|... ..|+ +.||...+|
T Consensus 2 ~~~V~m~~~g~~G~~~F~P~~i~V~~G---dtV~f~~~~~--~H~v~~~~~~~P~g~---------~~f~-~~pg~t~s~ 66 (123)
T 3erx_A 2 THEVHMLNKGESGAMVFEPAFVRAEPG---DVINFVPTDK--SHNVEAIKEILPEGV---------ESFK-SKINESYTL 66 (123)
T ss_dssp EEEEEEEEEETTEEEEEESSEEEECTT---EEEEEEESST--TCCCEECTTSSCTTC---------CCCB-CCTTCCEEE
T ss_pred cEEEEEEecCCCCcEeEeCCEEEECCC---CEEEEEECCC--CceEEEcCCcCCCCc---------ccee-cCCCCEEEE
Confidence 56676664 347899999999985543 4667777652 355666555556421 0121 468998888
Q ss_pred EEEEeeeecceeee
Q psy4599 132 VVIVQPKSYGAFNF 145 (201)
Q Consensus 132 ~~vv~p~~~G~fn~ 145 (201)
+| .+.|.|.+
T Consensus 67 TF----~~pG~y~y 76 (123)
T 3erx_A 67 TV----TEPGLYGV 76 (123)
T ss_dssp EE----CSCEEEEE
T ss_pred Ee----CCCeEEEE
Confidence 88 56776643
No 7
>2x3c_A Toxic extracellular endopeptidase; hydrolase; 1.99A {Aeromonas salmonicida subsp} PDB: 2x3a_A 2x3b_A
Probab=78.88 E-value=2.7 Score=37.31 Aligned_cols=57 Identities=18% Similarity=0.119 Sum_probs=42.0
Q ss_pred ceEEEEEEEEcCccceeeEE--EecCCCCCCCceEecCee---------------eeeEeeeCCCCceEEEEEEE
Q psy4599 2 DVVVKYTIYNIGNSVATNVV--VSDSSFPPEAFEIQGGQF---------------KFVIDRVPPQTNVTHVVIVQ 59 (201)
Q Consensus 2 d~tV~y~IyNvG~s~A~dV~--l~D~~fp~~~F~iv~G~~---------------~~~~~ri~pg~nvsH~~vv~ 59 (201)
++.|+.+|.|.|+.+..=++ +. |++|.+-|+|-.+-. ...+-.|+||+++++.+-|-
T Consensus 37 ~~~vk~tvtN~g~~~~~lLk~~~l-D~~~~~~~~V~~~G~~v~f~Gi~~~~~~~~~d~f~~L~pG~Sve~~~dla 110 (343)
T 2x3c_A 37 DVRVNLTLTNTGDKPIRLLKWQLP-GSDDAPLFLVERDGQPVSYEGALIKRAAPTDKDFQLLKAGQSLTVQAEVS 110 (343)
T ss_dssp CCEEEEEEEECSSSCEEEEGGGSC-SSSCCCCEEEEETTEECCBCSCCCCCCCCCGGGEEEECTTCEEEEEEECT
T ss_pred CeEEEEEEEeCCCCceEeeccCCC-CcCccceEEEEeCCcccceeeEEEeccCCChhhcEEeCCCCeEEEEEehh
Confidence 67899999999998742222 23 467888899865421 23588899999999999874
No 8
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=78.07 E-value=21 Score=27.25 Aligned_cols=96 Identities=10% Similarity=0.179 Sum_probs=57.3
Q ss_pred eEecCeeeeeEeeeCCCCceEEEEEEEeceeeeEEeeeEEEEEEeCCCCceeEEEecccceeeeEE-Eec-CCCCCCceE
Q psy4599 33 EIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVV-VSD-SSFPPEAFE 110 (201)
Q Consensus 33 ~iv~G~~~~~~~ri~pg~nvsH~~vv~p~~~G~fn~t~A~VtY~~s~~a~~y~IyNvG~s~A~dV~-l~D-~sfp~~~F~ 110 (201)
++..|++.++.+--.+|+.+.-.+.|+-... .+..++|..+.. .++.|++.... .|= .++ ..|+. .
T Consensus 1 ~~~~~~l~~~v~~~~~g~~v~~~ltv~N~s~-----~~v~l~f~Sgq~-~Df~v~d~~G~---~VwrwS~~~~FtQ-a-- 68 (120)
T 3isy_A 1 GMENQEVVLSIDAIQEPEQIKFNMSLKNQSE-----RAIEFQFSTGQK-FELVVYDSEHK---ERYRYSKEKMFTQ-A-- 68 (120)
T ss_dssp ---CCSEEEEEEEEECSSCEEEEEEEEECSS-----SCEEEEESSSCC-EEEEEECTTCC---EEEETTTTCCCCC-C--
T ss_pred CccccEEEEEEeeccCCCeEEEEEEEEcCCC-----CcEEEEeCCCCE-EEEEEECCCCC---EEEEccccchhhh-h--
Confidence 3677888888888888888888888873322 123344443322 25555653221 111 122 33332 1
Q ss_pred EecCceeeeeeeeCCCCceEEEEEEe-eeecceeeeee
Q psy4599 111 IQGGQFKFVIDRVPPQTNVTHVVIVQ-PKSYGAFNFSF 147 (201)
Q Consensus 111 iv~G~~s~~~~rI~pg~nvsH~~vv~-p~~~G~fn~t~ 147 (201)
..=..|+||...+...++. +..+|.|....
T Consensus 69 -------~~~~tl~pGE~~~f~~~w~~~~~pG~Ytl~a 99 (120)
T 3isy_A 69 -------FQNLTLESGETYDFSDVWKEVPEPGTYEVKV 99 (120)
T ss_dssp -------CEEEEECTTCEEEEEEEESSCCCSEEEEEEE
T ss_pred -------hceEEECCCCEEEEEEEeCCCCCCccEEEEE
Confidence 2346899999999999999 56789887654
No 9
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=77.92 E-value=6.5 Score=29.54 Aligned_cols=83 Identities=14% Similarity=0.101 Sum_probs=51.7
Q ss_pred EEEEEEEec-eeeeEEeeeEEEEEEeCCCCceeEEEecccceeeeEEEecCCCCCCceEEecCceeeeeeeeCCCCceEE
Q psy4599 53 THVVIVQPK-SYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTH 131 (201)
Q Consensus 53 sH~~vv~p~-~~G~fn~t~A~VtY~~s~~a~~y~IyNvG~s~A~dV~l~D~sfp~~~F~iv~G~~s~~~~rI~pg~nvsH 131 (201)
+|.|.|.-. ..|.+.|.|+.|+=+.. ..++..|.+. .-+|.+.++..|... ..| .+.||...++
T Consensus 2 t~~V~m~~~g~~g~~~F~P~~i~V~~G---dtV~f~n~~~--~H~v~~~~~~~p~~~---------~~~-~~~pG~t~~~ 66 (123)
T 1pmy_A 2 EVAVKMLNSGPGGMMVFDPALVRLKPG---DSIKFLPTDK--GHNVETIKGMAPDGA---------DYV-KTTVGQEAVV 66 (123)
T ss_dssp EEEEEEEEEETTEEEEEESSEEEECTT---CEEEEECSSS--SCCCEECTTSSCTTC---------CCC-BCCTTSCEEE
T ss_pred eEEEEEEeccCCCCceEeCCEEEECCC---CEEEEEECCC--CcEEEEecccCCCCc---------cce-ecCCCCEEEE
Confidence 577776432 24889999999986554 4677888875 456666655555431 012 2468888777
Q ss_pred EEEEeeeecceeeeeeeEEEEecCCCCccCce
Q psy4599 132 VVIVQPKSYGAFNFSFAEVSYKASENAEDGDW 163 (201)
Q Consensus 132 ~~vv~p~~~G~fn~t~A~v~yr~s~~a~~~~~ 163 (201)
+| .+.|.| .|.++. |...+
T Consensus 67 tF----~~~G~y-------~y~C~~--H~~~g 85 (123)
T 1pmy_A 67 KF----DKEGVY-------GFKCAP--HYMMG 85 (123)
T ss_dssp EC----CSCEEE-------EEECST--TTTTT
T ss_pred Ee----CCCeEE-------EEEeCC--ccccC
Confidence 76 456655 556654 65333
No 10
>2kut_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Geobacter metallireducens}
Probab=77.45 E-value=3 Score=32.08 Aligned_cols=64 Identities=20% Similarity=0.175 Sum_probs=43.2
Q ss_pred ceEEEEEEEEcCcc--ceeeEEEecCCCCCCCceEecCee--eeeEeeeCCCCceEEEEEEE--ecee-----eeEEeee
Q psy4599 2 DVVVKYTIYNIGNS--VATNVVVSDSSFPPEAFEIQGGQF--KFVIDRVPPQTNVTHVVIVQ--PKSY-----GAFNFSF 70 (201)
Q Consensus 2 d~tV~y~IyNvG~s--~A~dV~l~D~~fp~~~F~iv~G~~--~~~~~ri~pg~nvsH~~vv~--p~~~-----G~fn~t~ 70 (201)
.++|+.+|-|+|.. +|..|.|.-++ |.. +|.+ ......|+||+..+-.+.+. +... |.|.+.+
T Consensus 17 ~vTvsatVkN~Gt~~s~a~~V~~yl~~-p~~-----gg~~vgt~tv~~LaaG~s~t~~v~~~~~~~~~~~a~~Gsy~v~A 90 (122)
T 2kut_A 17 EITVSARVTNRGAAEAHNVPVAVYLGN-PAQ-----GGVEIGRDTISRIPVGGTGLARVQWKATRKLAGRAANPGVPVYA 90 (122)
T ss_dssp EEEEEEEEECCSSSCBCCCCEEECSSC-TTT-----CCCCCBCCCCSCBCTTCEEECCEEEECCCCCSSCCSCCCCCCCE
T ss_pred eEEEEEEEEeCCCcccCcEEEEEEeCC-Ccc-----CCeEEeeEEccccCCCCeEEEEEEEecCCcccccccCceEEEEE
Confidence 57899999999988 67778887765 321 2222 22346899999999544444 4443 8787765
Q ss_pred E
Q psy4599 71 A 71 (201)
Q Consensus 71 A 71 (201)
.
T Consensus 91 v 91 (122)
T 2kut_A 91 V 91 (122)
T ss_dssp E
T ss_pred E
Confidence 3
No 11
>2xzz_A Protein-glutamine gamma-glutamyltransferase K; 2.30A {Homo sapiens}
Probab=75.69 E-value=3.3 Score=30.64 Aligned_cols=61 Identities=18% Similarity=0.063 Sum_probs=40.3
Q ss_pred ceEEEEEEEEcCccceeeEEEecCCCCCCCceEecCeeeeeEeeeCCCCceEEEEEEEeceeeeEEe
Q psy4599 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAFNF 68 (201)
Q Consensus 2 d~tV~y~IyNvG~s~A~dV~l~D~~fp~~~F~iv~G~~~~~~~ri~pg~nvsH~~vv~p~~~G~fn~ 68 (201)
+++++.++.|-=.-+-.|..|.=++ =-+..+ .......|+||+.+++.+.+.|.+.|.-.+
T Consensus 21 ~l~v~vsf~NPL~~~L~~c~~~vEG-----~GL~~~-~~~~~~~v~pg~~~~~~~~~~P~~~G~~~L 81 (102)
T 2xzz_A 21 ECEVQIVFKNPLPVTLTNVVFRLEG-----SGLQRP-KILNVGDIGGNETVTLRQSFVPVRPGPRQL 81 (102)
T ss_dssp CEEEEEEEECCSSSCBCSEEEEEEE-----TTTEEE-EEEEECCBCTTCEEEEEEEECCCSCSSCCC
T ss_pred eEEEEEEEECCCCCcccCEEEEEEC-----CCCCcc-eEEEcCcCCCCCEEEEEEEEecCcccceEE
Confidence 4555555555555444444443111 113444 667788999999999999999999998654
No 12
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=75.65 E-value=9.1 Score=28.61 Aligned_cols=73 Identities=18% Similarity=0.178 Sum_probs=46.4
Q ss_pred EEEEEEEece-eeeEEeeeEEEEEEeCCCCceeEEEecccceeeeEEEecCCCCCCceEEecCceeeeeeeeCCCCceEE
Q psy4599 53 THVVIVQPKS-YGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTH 131 (201)
Q Consensus 53 sH~~vv~p~~-~G~fn~t~A~VtY~~s~~a~~y~IyNvG~s~A~dV~l~D~sfp~~~F~iv~G~~s~~~~rI~pg~nvsH 131 (201)
+|.|.|.... .|.+.|.|..|+=+.. ..++..|.+. .-+|.+.+..+|+.. ..| .+.||...++
T Consensus 2 t~~V~ml~~g~~g~~~F~P~~i~V~~G---dtV~f~n~d~--~H~v~~~~~~~p~~~---------~~~-~~~~g~t~~~ 66 (122)
T 2ux6_A 2 DFEVHMLNKGKDGAMVFEPASLKVAPG---DTVTFIPTDK--GHNVETIKGMIPDGA---------EAF-KSKINENYKV 66 (122)
T ss_dssp EEEEEEEEEETTEEEEEESSEEEECTT---EEEEEEESSS--SCCCEECTTCSCTTC---------CCC-BCCTTCCEEE
T ss_pred eEEEEEEecCCCCCceEeCCEEEECCC---CEEEEEECCC--CcEEEEcccccCCCc---------cee-ecCCCCEEEE
Confidence 5677764333 4789999999976543 4788888865 456666554455421 112 2468888888
Q ss_pred EEEEeeeecceee
Q psy4599 132 VVIVQPKSYGAFN 144 (201)
Q Consensus 132 ~~vv~p~~~G~fn 144 (201)
+| .+.|.|.
T Consensus 67 tF----~~~G~y~ 75 (122)
T 2ux6_A 67 TF----TAPGVYG 75 (122)
T ss_dssp EE----CSCEEEE
T ss_pred Ee----CCCEEEE
Confidence 87 4667553
No 13
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=73.58 E-value=18 Score=27.60 Aligned_cols=67 Identities=10% Similarity=0.154 Sum_probs=41.0
Q ss_pred ceEEEEEEEEcCccce---------eeEEEec-CCCCCCCceEecCee---eeeEeeeCCCCceEEEEEEE-eceeeeEE
Q psy4599 2 DVVVKYTIYNIGNSVA---------TNVVVSD-SSFPPEAFEIQGGQF---KFVIDRVPPQTNVTHVVIVQ-PKSYGAFN 67 (201)
Q Consensus 2 d~tV~y~IyNvG~s~A---------~dV~l~D-~~fp~~~F~iv~G~~---~~~~~ri~pg~nvsH~~vv~-p~~~G~fn 67 (201)
.+.+.++|-|.|+.+- +|+.|.| ++ .+.|..-.|.+ -..-..|+||+..+...++. +...|.|.
T Consensus 19 ~v~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G--~~VwrwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~~~pG~Yt 96 (120)
T 3isy_A 19 QIKFNMSLKNQSERAIEFQFSTGQKFELVVYDSEH--KERYRYSKEKMFTQAFQNLTLESGETYDFSDVWKEVPEPGTYE 96 (120)
T ss_dssp CEEEEEEEEECSSSCEEEEESSSCCEEEEEECTTC--CEEEETTTTCCCCCCCEEEEECTTCEEEEEEEESSCCCSEEEE
T ss_pred eEEEEEEEEcCCCCcEEEEeCCCCEEEEEEECCCC--CEEEEccccchhhhhhceEEECCCCEEEEEEEeCCCCCCccEE
Confidence 4678899999998542 2444443 11 11121112211 22337899999999999998 56788887
Q ss_pred eee
Q psy4599 68 FSF 70 (201)
Q Consensus 68 ~t~ 70 (201)
..+
T Consensus 97 l~a 99 (120)
T 3isy_A 97 VKV 99 (120)
T ss_dssp EEE
T ss_pred EEE
Confidence 543
No 14
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=72.18 E-value=7.5 Score=26.86 Aligned_cols=79 Identities=11% Similarity=0.055 Sum_probs=46.4
Q ss_pred EEEEEEEeceeeeEEeeeEEEEEEeCCCCceeEEEecccceeeeEEEecCCCCCCceEEecCceeeeeeeeCCCCceEEE
Q psy4599 53 THVVIVQPKSYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHV 132 (201)
Q Consensus 53 sH~~vv~p~~~G~fn~t~A~VtY~~s~~a~~y~IyNvG~s~A~dV~l~D~sfp~~~F~iv~G~~s~~~~rI~pg~nvsH~ 132 (201)
+|.|.|.. ..|.+.|.|+.++=+.. ..+++.|.++ ..-++.+.+..+|... ..++..=..++||...+++
T Consensus 2 t~~V~~~~-~~~~~~F~P~~i~v~~G---~~V~~~n~~~-~~H~~~~~~~~~~~~~-----~~~~~~~~~~~~g~~~~~t 71 (97)
T 1b3i_A 2 SVQIKMGT-DKYAPLYEPKALSISAG---DTVEFVMNKV-GPHNVIFDKVPAGESA-----PALSNTKLAIAPGSFYSVT 71 (97)
T ss_dssp CEEEEEEE-TTTEEEEESSEEEECTT---CEEEEEECSS-CCCCBEEEECCTTSCH-----HHHCBCCCCCSCSCCEEEE
T ss_pred eEEEEEec-cCCccEEeCCEEEECCC---CEEEEEECCC-CCeEEEEeCCCCcccc-----ccccccceecCCCCEEEEE
Confidence 35666642 12578999998865443 3577888764 3455666665554321 0000111357899988887
Q ss_pred EEEeeeecceeee
Q psy4599 133 VIVQPKSYGAFNF 145 (201)
Q Consensus 133 ~vv~p~~~G~fn~ 145 (201)
| .+.|.|.+
T Consensus 72 f----~~~G~y~y 80 (97)
T 1b3i_A 72 L----GTPGTYSF 80 (97)
T ss_dssp C----CSCSEEEE
T ss_pred e----CCCeEEEE
Confidence 6 56776644
No 15
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=72.13 E-value=8.3 Score=29.30 Aligned_cols=80 Identities=15% Similarity=0.169 Sum_probs=51.9
Q ss_pred EEEEEEEec-eee-eEEeeeEEEEEEeCCCCceeEEEecccceeeeEEEecCCCCCCceEEecCceeeeeeeeCCCCceE
Q psy4599 53 THVVIVQPK-SYG-AFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVT 130 (201)
Q Consensus 53 sH~~vv~p~-~~G-~fn~t~A~VtY~~s~~a~~y~IyNvG~s~A~dV~l~D~sfp~~~F~iv~G~~s~~~~rI~pg~nvs 130 (201)
+|.+.+.-. ..| .+.|.|+.|+=+.. ..++..|.+ ..=+|...+..+|+..- .| .+.||...+
T Consensus 2 ~~~v~ml~~g~~G~~~~F~P~~i~V~~G---DTV~f~n~~--~~Hnv~~~~~~~p~g~~---------~~-~~~pg~t~s 66 (124)
T 3ef4_A 2 EHIVEMRNKDDAGNTMVFQPGFVKVEAG---DTVKFVPTD--KSHNAESVREVWPEGVA---------PV-KGGFSKEVV 66 (124)
T ss_dssp EEEEEEEEECTTSCEEEEESSEEEECTT---CEEEEECSS--SSCCCEECTTTSCTTSC---------CC-BCCTTCCEE
T ss_pred cEEEEEEEcCCCCceeEEeCCEEEECCC---CEEEEEECC--CCccEEEeCCcCCCCcc---------cc-ccCCCCEEE
Confidence 466665533 567 79999999985443 467788876 45566666666664220 11 356899888
Q ss_pred EEEEEeeeecceeeeeeeEEEEecCCCCcc
Q psy4599 131 HVVIVQPKSYGAFNFSFAEVSYKASENAED 160 (201)
Q Consensus 131 H~~vv~p~~~G~fn~t~A~v~yr~s~~a~~ 160 (201)
|+| .+.|.| .|.+.. |.
T Consensus 67 ~TF----~~~G~y-------~Y~C~~--H~ 83 (124)
T 3ef4_A 67 FNA----EKEGLY-------VLKCAP--HY 83 (124)
T ss_dssp EEC----CSSEEE-------EEECTT--TG
T ss_pred EEe----CCCeEE-------EEEcCC--CC
Confidence 888 466766 566665 64
No 16
>2l0d_A Cell surface protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Methanosarcina acetivorans}
Probab=71.16 E-value=20 Score=26.97 Aligned_cols=58 Identities=12% Similarity=0.126 Sum_probs=40.4
Q ss_pred ceeEEEecccc--eeeeEEEecCCCCCCceEEecCceeeeeeeeCCCCceEEEEEEeee-ecceeeeeee
Q psy4599 82 EDYTIYNIGNS--VATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK-SYGAFNFSFA 148 (201)
Q Consensus 82 ~~y~IyNvG~s--~A~dV~l~D~sfp~~~F~iv~G~~s~~~~rI~pg~nvsH~~vv~p~-~~G~fn~t~A 148 (201)
...+|.|+|.. .+..|.|..++- .+. ......|++|++.+=.|...|+ ..|.|+++..
T Consensus 23 i~atVkN~G~~~a~~~~V~ly~~g~------~v~---t~~v~~LaaG~s~tv~~~w~~~~~~G~ytl~a~ 83 (114)
T 2l0d_A 23 MTATIENQGNKDSTSFNVSLLVDGI------VVD---TQTVTSLESENSTNVDFHWTLDGTANSYTLTVN 83 (114)
T ss_dssp EEEEEEECSSSCBCCEEEEEEETTE------EEE---EEEESCBCBTCEEEEEEEEECCCSCSEEEEEEE
T ss_pred EEEEEEECCCCCCCCEEEEEEECCE------EEc---ceecccccCCCEEEEEEEEeecCcCceEEEEEE
Confidence 46688999987 455666654321 111 1234568999998888888998 5899999775
No 17
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=69.77 E-value=7.3 Score=29.62 Aligned_cols=78 Identities=15% Similarity=0.176 Sum_probs=49.4
Q ss_pred EEEEEEEec-eee-eEEeeeEEEEEEeCCCCceeEEEecccceeeeEEEecCCCCCCceEEecCceeeeeeeeCCCCceE
Q psy4599 53 THVVIVQPK-SYG-AFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVT 130 (201)
Q Consensus 53 sH~~vv~p~-~~G-~fn~t~A~VtY~~s~~a~~y~IyNvG~s~A~dV~l~D~sfp~~~F~iv~G~~s~~~~rI~pg~nvs 130 (201)
+|.|-+.-+ ..| .+.|.|+.|+=+.. ..++..|.+. .-+|...+..+|... ..| .+.||...+
T Consensus 3 ~~~V~ml~~g~~g~~~~F~P~~i~V~~G---DtVtf~n~~~--~H~v~~~~~~~P~g~---------~~f-~s~pGet~s 67 (127)
T 3tu6_A 3 EYRVEMLNKAADGRVMAFEPAVIRAQPG---DTVTFVAKDK--GHNSALMKGGAPEGA---------ETW-KGKINEEIT 67 (127)
T ss_dssp EEEEEEEEECTTSCEEEEESSEEEECTT---CEEEEECSSS--SCCCEECTTCSCTTC---------CCC-BCCTTCCCE
T ss_pred cEEEEEEEcCCCCcccEEeCCEEEECCC---CEEEEEECCC--CceEEEccCcCCCCc---------cce-ecCCCCEEE
Confidence 566666543 345 89999999986554 3577777764 456666655555421 112 236899888
Q ss_pred EEEEEeeeecceeeeeeeEEEEecCC
Q psy4599 131 HVVIVQPKSYGAFNFSFAEVSYKASE 156 (201)
Q Consensus 131 H~~vv~p~~~G~fn~t~A~v~yr~s~ 156 (201)
++| .+.|.| .|.+..
T Consensus 68 ~TF----~~pG~y-------~y~C~~ 82 (127)
T 3tu6_A 68 VTL----SKPGVY-------MYQCAP 82 (127)
T ss_dssp EEC----CSCEEE-------EEECTT
T ss_pred EEe----CCCeEE-------EEEeCC
Confidence 887 566766 556664
No 18
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=69.59 E-value=14 Score=27.57 Aligned_cols=81 Identities=20% Similarity=0.163 Sum_probs=49.4
Q ss_pred EEEEEEEec-eeeeEEeeeEEEEEEeCCCCceeEEEecccceeeeEEEecCCCCCCceEEecCceeeeeeeeCCCCceEE
Q psy4599 53 THVVIVQPK-SYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTH 131 (201)
Q Consensus 53 sH~~vv~p~-~~G~fn~t~A~VtY~~s~~a~~y~IyNvG~s~A~dV~l~D~sfp~~~F~iv~G~~s~~~~rI~pg~nvsH 131 (201)
+|.|.|.-. ..|.+.|.|+.|+=+.. ..++..|.+. .-+|.+.++..|... ..|+ ..||...++
T Consensus 2 t~~V~m~~~g~~g~~~F~P~~i~V~~G---dtV~f~~~~~--~H~v~~~~~~~p~~~---------~~~~-~~pG~t~~~ 66 (123)
T 1paz_A 2 NIEVHMLNKGAEGAMVFEPAYIKANPG---DTVTFIPVDK--GHNVESIKDMIPEGA---------EKFK-SKINENYVL 66 (123)
T ss_dssp EEEEEEEEEETTEEEEEESSEEEECTT---CEEEEEESSS--SCCCEECTTCSCTTC---------CCCB-CCTTCCEEE
T ss_pred eEEEEEEeccCCCCceEeCCEEEECCC---CEEEEEECCC--CeEEEEecccCCCCc---------ccee-cCCCCEEEE
Confidence 577777432 24889999999986554 4577778765 355666544444321 0121 358887777
Q ss_pred EEEEeeeecceeeeeeeEEEEecCCCCccC
Q psy4599 132 VVIVQPKSYGAFNFSFAEVSYKASENAEDG 161 (201)
Q Consensus 132 ~~vv~p~~~G~fn~t~A~v~yr~s~~a~~~ 161 (201)
+| .+.|.| .|.++. |..
T Consensus 67 tF----~~~G~y-------~y~C~~--H~~ 83 (123)
T 1paz_A 67 TV----TQPGAY-------LVKCTP--HYA 83 (123)
T ss_dssp EC----CSCEEE-------EEECTT--TGG
T ss_pred Ee----CCCEEE-------EEEeCC--ccc
Confidence 76 456655 556654 653
No 19
>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=65.56 E-value=16 Score=26.66 Aligned_cols=57 Identities=19% Similarity=0.218 Sum_probs=39.2
Q ss_pred ceeEEEecccceeeeEEEecCCCCCCceEEecCceeeeeeeeCCCCceEEEEEEeeeecceeeeeee
Q psy4599 82 EDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAFNFSFA 148 (201)
Q Consensus 82 ~~y~IyNvG~s~A~dV~l~D~sfp~~~F~iv~G~~s~~~~rI~pg~nvsH~~vv~p~~~G~fn~t~A 148 (201)
..+.|-|.|+.++. .++.. +..|.+.--. ..|+||+...=.+.-.|+..|.|+...-
T Consensus 45 ~~~~l~N~g~~~~~-f~~~~----~~~F~i~P~~-----g~L~pg~~~~i~V~F~P~~~g~~~~~l~ 101 (122)
T 2ys4_A 45 KILLVRNIGNKNAV-FHIKT----CRPFSIEPAI-----GTLNVGESMQLEVEFEPQSVGDHSGRLI 101 (122)
T ss_dssp EEEEEECCSSSCEE-EEEEC----CTTEEEESSE-----EEECTTCEEEEEEEECCSSSBCCCCBCE
T ss_pred EEEEEEECCCCCEE-EEEec----CCCeEEECCc-----CEECCCCEEEEEEEEEcCCCccEEEEEE
Confidence 45566666665442 22221 2367654332 6899999999999999999999988764
No 20
>2xzz_A Protein-glutamine gamma-glutamyltransferase K; 2.30A {Homo sapiens}
Probab=62.85 E-value=3.7 Score=30.31 Aligned_cols=32 Identities=13% Similarity=0.008 Sum_probs=27.8
Q ss_pred eeeeeeeeCCCCceEEEEEEeeeecceeeeee
Q psy4599 116 FKFVIDRVPPQTNVTHVVIVQPKSYGAFNFSF 147 (201)
Q Consensus 116 ~s~~~~rI~pg~nvsH~~vv~p~~~G~fn~t~ 147 (201)
.......|+||+.+++.+.+.|.+.|.=.+..
T Consensus 52 ~~~~~~~v~pg~~~~~~~~~~P~~~G~~~L~a 83 (102)
T 2xzz_A 52 KILNVGDIGGNETVTLRQSFVPVRPGPRQLIA 83 (102)
T ss_dssp EEEEECCBCTTCEEEEEEEECCCSCSSCCCEE
T ss_pred eEEEcCcCCCCCEEEEEEEEecCcccceEEEE
Confidence 56778899999999999999999999866543
No 21
>3cfu_A Uncharacterized lipoprotein YJHA; YJHA_bacsu, SR562, NESG, structural genomics, PSI-2, protein structure initiative; 2.40A {Bacillus subtilis}
Probab=62.50 E-value=19 Score=28.38 Aligned_cols=56 Identities=16% Similarity=0.181 Sum_probs=36.3
Q ss_pred eEEEEEEEEcCccce----eeEEEec-CCCCCC-CceEecCe-eeeeEeeeCCCCceEEEEEEE
Q psy4599 3 VVVKYTIYNIGNSVA----TNVVVSD-SSFPPE-AFEIQGGQ-FKFVIDRVPPQTNVTHVVIVQ 59 (201)
Q Consensus 3 ~tV~y~IyNvG~s~A----~dV~l~D-~~fp~~-~F~iv~G~-~~~~~~ri~pg~nvsH~~vv~ 59 (201)
+.|+++|-|.|+.+. ++.+|.| ++-.-+ ++. ..+. -......|.||..++=.++..
T Consensus 49 viV~VTIeN~g~e~~~~s~~~F~L~d~dG~~~~~~~~-~~~~~~~l~~g~L~pG~kvtG~ivFe 111 (159)
T 3cfu_A 49 LIIEVTMENIGEDSISYNFIGFDLRDKNDQSVRPVFS-IEEKGRILMGGTLVSGKKVTGVLSYV 111 (159)
T ss_dssp EEEEEEEEECSSSCEEEEGGGEEEECTTCCBCCCEEC-STTTTTBCCEEEECTTCEEEEEEEEE
T ss_pred EEEEEEEEECCCCceeeCcccEEEEeCCCCEEeceee-ecccCCcccccccCCCCEEEEEEEEE
Confidence 679999999998643 4677866 332111 221 1221 133446999999999888877
No 22
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=61.72 E-value=61 Score=26.03 Aligned_cols=58 Identities=14% Similarity=0.208 Sum_probs=40.9
Q ss_pred ceeEEEecccceeeeEEEecCCCCCCceEEecCceeeeee--eeCCCCceEEEEEEeeeec-ce----eeeeeeE
Q psy4599 82 EDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVID--RVPPQTNVTHVVIVQPKSY-GA----FNFSFAE 149 (201)
Q Consensus 82 ~~y~IyNvG~s~A~dV~l~D~sfp~~~F~iv~G~~s~~~~--rI~pg~nvsH~~vv~p~~~-G~----fn~t~A~ 149 (201)
..++|.|.|+++ +.+.+- ..-+|-+..+|. .|+||....=.+...|+.. |. |+-+...
T Consensus 138 ~~f~i~N~G~~p---L~I~~v-------~~scgct~~~~~~~~i~PGe~~~i~v~~~~~~~~g~~~~~~~~~i~v 202 (220)
T 2qsv_A 138 AAIEIRNVGAGP---LRLHSV-------TTRNPALTAVPDRTEIKPGGSTLLRIAVDPQVMKAEGWQSIAADISI 202 (220)
T ss_dssp EEEEEEECSSSC---EEEEEE-------EECSTTEEEEESCSEECTTCEEEEEEEECHHHHHHTTCSEEEEEEEE
T ss_pred EEEEEEECCCCC---EEEEEE-------EeCCCCEeeecCCccCCCCCEEEEEEEEecCCCCCcccceeccEEEE
Confidence 467788888876 334331 123677776664 6999999998888889888 88 8776554
No 23
>1vjj_A Protein-glutamine glutamyltransferase E; transglutaminase 3, X-RAY crystallography, metalloenzyme, calcium ION; HET: GDP; 1.90A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1sgx_A* 1l9m_A 1l9n_A* 1nud_A 1nuf_A 1nug_A 1rle_A*
Probab=56.81 E-value=21 Score=34.84 Aligned_cols=63 Identities=14% Similarity=0.120 Sum_probs=42.1
Q ss_pred ceEEEEEEEEcCccceeeEEEecCCCCCCCceEecCeeeeeEeeeCCCCceEEEEEEEeceeeeEEee
Q psy4599 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAFNFS 69 (201)
Q Consensus 2 d~tV~y~IyNvG~s~A~dV~l~D~~fp~~~F~iv~G~~~~~~~ri~pg~nvsH~~vv~p~~~G~fn~t 69 (201)
.+++++++.|-=..+-.|..|.=++ =-|..|........|+||+.+++.+.+.|.+.|.-++.
T Consensus 609 ~l~v~v~f~NPL~~~L~~c~~~vEG-----~GL~~~~~~~~~~~v~pg~~~~~~~~~~P~~~G~r~L~ 671 (692)
T 1vjj_A 609 PVNVQMLFSNPLDEPVRDCVLMVEG-----SGLLLGNLKIDVPTLGPKERSRVRFDILPSRSGTKQLL 671 (692)
T ss_dssp CEEEEEEEECCSSSCBCSEEEEEEC-----TTTSSSCEEEEECCBCTTCEEEEEEEECCCSCEEEEEE
T ss_pred eEEEEEEEECCCCCcccceEEEEEC-----CCCCCCceEEEcCccCCCCEEEEEEEEEeccccceEEE
Confidence 3445555555544444444433111 11445667788889999999999999999999997764
No 24
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=55.79 E-value=17 Score=24.96 Aligned_cols=72 Identities=15% Similarity=0.252 Sum_probs=40.8
Q ss_pred eeeEEeeeEEEEEEeCCCCceeEEEecccceeeeEEEecCCCCCCceEEecCceeeeeeeeCCCCceEEEEEEeeeecce
Q psy4599 63 YGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGA 142 (201)
Q Consensus 63 ~G~fn~t~A~VtY~~s~~a~~y~IyNvG~s~A~dV~l~D~sfp~~~F~iv~G~~s~~~~rI~pg~nvsH~~vv~p~~~G~ 142 (201)
.|.+.|.|..++=+.. ..+++.|.+. ..-++.+.+..+|.. +. .+.+...=..|+||...+++|. +.|.
T Consensus 10 ~~~~~F~P~~i~v~~G---~~V~~~n~~~-~~H~~~~~~~~~p~~-~~--~~~~~~~~~~~~pG~~~~~tf~----~~G~ 78 (98)
T 2plt_A 10 SGALEFVPKTLTIKSG---ETVNFVNNAG-FPHNIVFDEDAIPSG-VN--ADAISRDDYLNAPGETYSVKLT----AAGE 78 (98)
T ss_dssp TCCSSEESSEEEECTT---CEEEEEECSS-CCEEEEECGGGSCTT-CC--HHHHCEEEEECSTTCEEEEECC----SCEE
T ss_pred CCCceEeCCEEEECCC---CEEEEEECCC-CceEEEEeCCCCCCc-cc--cccccccceecCCCCEEEEEeC----CCeE
Confidence 4568888888774443 3567788764 345667666555532 21 1111111136889988877663 5665
Q ss_pred eee
Q psy4599 143 FNF 145 (201)
Q Consensus 143 fn~ 145 (201)
|.+
T Consensus 79 y~y 81 (98)
T 2plt_A 79 YGY 81 (98)
T ss_dssp EEE
T ss_pred EEE
Confidence 533
No 25
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=55.42 E-value=14 Score=25.41 Aligned_cols=79 Identities=18% Similarity=0.233 Sum_probs=43.2
Q ss_pred EEEEEEeceeeeEEeeeEEEEEEeCCCCceeEEEecccceeeeEEEecCCCCCCceEEecCceeeeeeeeCCCCceEEEE
Q psy4599 54 HVVIVQPKSYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVV 133 (201)
Q Consensus 54 H~~vv~p~~~G~fn~t~A~VtY~~s~~a~~y~IyNvG~s~A~dV~l~D~sfp~~~F~iv~G~~s~~~~rI~pg~nvsH~~ 133 (201)
|.|.|.+ ..|.+.|.|+.++=+.. ..+++.|.+. ..-++.+.+..+|... ...++..=..++||...+++|
T Consensus 3 ~~V~~~~-~~~~~~F~P~~i~v~~G---~~V~~~n~~~-~~H~~~~~~~~~pg~~----~~~~~~~~~~~~pG~~~~~tf 73 (98)
T 1pcs_A 3 ATVKMGS-DSGALVFEPSTVTIKAG---EEVKWVNNKL-SPHNIVFDADGVPADT----AAKLSHKGLLFAAGESFTSTF 73 (98)
T ss_dssp EEEEESC-TTSCSSEESSEEEECTT---CEEEEEECSS-CCEEEEECCSSSCHHH----HHHHCEEEEECSTTCEEEEEC
T ss_pred EEEEEec-CCCccEEeCCEEEECCC---CEEEEEECCC-CCcEEEEeCCCCCccc----cccccccccccCCCCEEEEEc
Confidence 4455521 12568888888855443 3667778764 3455666665554110 001111113578998888766
Q ss_pred EEeeeecceeee
Q psy4599 134 IVQPKSYGAFNF 145 (201)
Q Consensus 134 vv~p~~~G~fn~ 145 (201)
.+.|.|.+
T Consensus 74 ----~~~G~y~~ 81 (98)
T 1pcs_A 74 ----TEPGTYTY 81 (98)
T ss_dssp ----CSCEEEEE
T ss_pred ----CCCeEEEE
Confidence 46676544
No 26
>3hrz_B Cobra venom factor; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Naja kaouthia} PDB: 3frp_G* 3hs0_B*
Probab=55.41 E-value=32 Score=28.67 Aligned_cols=64 Identities=14% Similarity=-0.035 Sum_probs=43.3
Q ss_pred ceeEEEecccceeeeEEEecCCCCCCceEEecC--ceeeeeeeeCCCCceEEEEEEeeeecceeeeeee
Q psy4599 82 EDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGG--QFKFVIDRVPPQTNVTHVVIVQPKSYGAFNFSFA 148 (201)
Q Consensus 82 ~~y~IyNvG~s~A~dV~l~D~sfp~~~F~iv~G--~~s~~~~rI~pg~nvsH~~vv~p~~~G~fn~t~A 148 (201)
....+||-.+.. ..|++.=. ..+.|..... ....+.-.|+||+..+..+.|+|++.|..+++-.
T Consensus 100 l~~~V~Ny~~~~-~~v~V~l~--~~~~~~~~~~~~~~~~~~v~v~a~~~~~v~f~i~p~~~G~~~i~v~ 165 (252)
T 3hrz_B 100 IRAILHNYVNED-IYVRVELL--YNPAFCSASTKGQRYRQQFPIKALSSRAVPFVIVPLEQGLHDVEIK 165 (252)
T ss_dssp EEEEEEECSSSC-EEEEEEEC--CCTTEEESCCSSCCEEEEEEECTTEEEEEEEEEEECSSEEEEEEEE
T ss_pred EEEEEEcccCce-EEEEEEEE--cCCceEeecCCCCceEEEEEECCCCeEEEEEEEEeccCCcEEEEEE
Confidence 566788887654 33443322 2245766542 2234556899999999999999999998777643
No 27
>2x3c_A Toxic extracellular endopeptidase; hydrolase; 1.99A {Aeromonas salmonicida subsp} PDB: 2x3a_A 2x3b_A
Probab=55.25 E-value=16 Score=32.40 Aligned_cols=68 Identities=12% Similarity=0.052 Sum_probs=43.8
Q ss_pred CCCceeEEEecccceeeeEEE-ecCCCCCCceEEecCcee---------------eeeeeeCCCCceEEEEEEeee----
Q psy4599 79 ENAEDYTIYNIGNSVATNVVV-SDSSFPPEAFEIQGGQFK---------------FVIDRVPPQTNVTHVVIVQPK---- 138 (201)
Q Consensus 79 ~~a~~y~IyNvG~s~A~dV~l-~D~sfp~~~F~iv~G~~s---------------~~~~rI~pg~nvsH~~vv~p~---- 138 (201)
.-..+.+|.|.|+.+..=+.. --+++|.+.|+|-.+.-. -.|-.|+||.++++.|-|-..
T Consensus 37 ~~~vk~tvtN~g~~~~~lLk~~~lD~~~~~~~~V~~~G~~v~f~Gi~~~~~~~~~d~f~~L~pG~Sve~~~dla~~ydLs 116 (343)
T 2x3c_A 37 DVRVNLTLTNTGDKPIRLLKWQLPGSDDAPLFLVERDGQPVSYEGALIKRAAPTDKDFQLLKAGQSLTVQAEVSGLYDMS 116 (343)
T ss_dssp CCEEEEEEEECSSSCEEEEGGGSCSSSCCCCEEEEETTEECCBCSCCCCCCCCCGGGEEEECTTCEEEEEEECTTTBTCC
T ss_pred CeEEEEEEEeCCCCceEeeccCCCCcCccceEEEEeCCcccceeeEEEeccCCChhhcEEeCCCCeEEEEEehhhccccC
Confidence 344678888888887322221 125678788888654222 247889999999999998421
Q ss_pred ecceeeee
Q psy4599 139 SYGAFNFS 146 (201)
Q Consensus 139 ~~G~fn~t 146 (201)
..|.|.+.
T Consensus 117 ~gG~y~v~ 124 (343)
T 2x3c_A 117 AQGQYSIR 124 (343)
T ss_dssp SCEEEEEE
T ss_pred CCceEEEE
Confidence 34555554
No 28
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=55.15 E-value=80 Score=25.32 Aligned_cols=114 Identities=13% Similarity=0.072 Sum_probs=63.6
Q ss_pred eEEEEEEEEcCccceeeEEEecCCCCCCCceEecCeeeeeEeeeCCCCceEEEEEEEeceeeeEEeeeEEEEEEe-C-CC
Q psy4599 3 VVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKA-S-EN 80 (201)
Q Consensus 3 ~tV~y~IyNvG~s~A~dV~l~D~~fp~~~F~iv~G~~~~~~~ri~pg~nvsH~~vv~p~~~G~fn~t~A~VtY~~-s-~~ 80 (201)
.+.++.|.|.|+.+ +.+++. ..|+ .|.+ +..=+.|+||+.-.=.+..-+.+.+.+......|+-.. + .+
T Consensus 21 ~~~~~~i~N~g~~p-l~i~~~--~~p~-~~~~-----~~~~~~I~PG~~g~I~vt~~~~~~~~~G~~~~~i~v~~~~~~~ 91 (220)
T 2qsv_A 21 GVVRLVVNNTDESD-LQVAVV--SLPS-FVSL-----DDRAFRLQAREPRELNLSLAVPRNMPPGMKDEPLVLEVTSPET 91 (220)
T ss_dssp CEEEEEEEECSSSC-EEEEEE--ECCT-TEEC-----SCCEEEECSSSCEEEEEEECCCTTCCSEEEEEEEEEEEECTTT
T ss_pred ceEEEEEEeCCCCc-eEEEec--cCCC-ceEe-----eeCcceeCCCCceEEEEEEcchhcccCCceeeEEEEEEEcCCC
Confidence 46788999999954 344443 1122 1221 13347899999888888887777532222222222222 1 11
Q ss_pred CceeEEEecccceeeeEEEecCCCCC---------CceEEecCceeeeeeeeCCCCceEEEEEEeee
Q psy4599 81 AEDYTIYNIGNSVATNVVVSDSSFPP---------EAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 138 (201)
Q Consensus 81 a~~y~IyNvG~s~A~dV~l~D~sfp~---------~~F~iv~G~~s~~~~rI~pg~nvsH~~vv~p~ 138 (201)
... +...+.++-...|. ...+ -- ....|..|+ |..++|.|.++=.
T Consensus 92 ~~~---------~~~~i~v~g~v~p~~~~~~~~~~~~i~--~~-~~~dfG~i~-g~~~~~~f~i~N~ 145 (220)
T 2qsv_A 92 GKK---------AVDSVMVSLPLVDNFPALTAAQTGVME--LS-TYLDMGQLD-GETTKAAIEIRNV 145 (220)
T ss_dssp CCE---------EEEEEEEEEEECCCGGGCCGGGCCCEE--CC-CEEEEEECT-TSCEEEEEEEEEC
T ss_pred Ccc---------cccEEEEEEEEcccchhhhhccCCEEE--EE-eEEeeeccC-CCeEEEEEEEEEC
Confidence 111 11234444433321 1222 22 778999999 9999999999843
No 29
>3gin_A Sodium/calcium exchanger 1; CBD1, CBD2, NCX, calcium binding domain 1, antiport, calcium transport, calmodulin-binding, cell membrane; 2.40A {Canis lupus familiaris} PDB: 2dpk_A* 2fws_A
Probab=54.99 E-value=74 Score=24.89 Aligned_cols=92 Identities=16% Similarity=0.234 Sum_probs=42.1
Q ss_pred ccceeeEEEecCC------CCCCCceEec--CeeeeeEeee-CC-CCceEEEEEEEe---ceeeeEEeeeEEEEEEeCCC
Q psy4599 14 NSVATNVVVSDSS------FPPEAFEIQG--GQFKFVIDRV-PP-QTNVTHVVIVQP---KSYGAFNFSFAEVSYKASEN 80 (201)
Q Consensus 14 ~s~A~dV~l~D~~------fp~~~F~iv~--G~~~~~~~ri-~p-g~nvsH~~vv~p---~~~G~fn~t~A~VtY~~s~~ 80 (201)
-++|+.|.+.||. |.+..+.+-. |...++..|- -+ +..++-.+..++ +.-.-|..++.++++.+.+.
T Consensus 8 ~~~~~~~~i~ddd~~g~i~F~~~~y~V~E~~G~v~vtV~R~~G~~~~~v~V~y~T~dGTA~~g~Dy~~~~gtl~F~~Get 87 (160)
T 3gin_A 8 HSAALEVLFQGPGPVSKIFFEQGTYQCLENCGTVALTIIRRGGDLTNTVFVDFRTEDGTANAGSDYEFTEGTVVFKPGET 87 (160)
T ss_dssp -------------CEEEEEESCSEEEEETTSSEEEEEEEEESSCTTSCEEEEEEEEESSSCBTTTBCCCEEEEEECTTCC
T ss_pred ccceEEEEEecCCCccEEEEeCCEEEEEcCcEEEEEEEEEccCCCCcEEEEEEEEECCcccCCCCccccceEEEEcCCcE
Confidence 4789999999863 3334444443 3455555555 22 455555555442 11124555666677766665
Q ss_pred CceeEEEecccceeeeEEEecCCCCC--CceEEecCce
Q psy4599 81 AEDYTIYNIGNSVATNVVVSDSSFPP--EAFEIQGGQF 116 (201)
Q Consensus 81 a~~y~IyNvG~s~A~dV~l~D~sfp~--~~F~iv~G~~ 116 (201)
.+. ..|.+.||..++ |.|.|.-.+.
T Consensus 88 ~k~-----------i~V~IidD~~~E~~EtF~v~Ls~p 114 (160)
T 3gin_A 88 QKE-----------IRVGIIDDDIFEEDKNFLVHLSNV 114 (160)
T ss_dssp EEE-----------EEEEBCCCSCCCCCEEEEEEEEEE
T ss_pred EEE-----------EEEEEECCCCccCceEEEEEECCC
Confidence 444 346777766655 5677765544
No 30
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=54.87 E-value=19 Score=25.13 Aligned_cols=39 Identities=15% Similarity=0.313 Sum_probs=24.9
Q ss_pred eeEEEecCCCCCCCceEecCee-eeeEeeeCCCCceEEEEEEE
Q psy4599 18 TNVVVSDSSFPPEAFEIQGGQF-KFVIDRVPPQTNVTHVVIVQ 59 (201)
Q Consensus 18 ~dV~l~D~~fp~~~F~iv~G~~-~~~~~ri~pg~nvsH~~vv~ 59 (201)
..|++.|..|.++...+-.|.+ ...|..- ..+.|.+.+.
T Consensus 16 v~V~~~~~~F~P~~i~v~~G~tV~~~~~n~---d~~~H~~~~~ 55 (100)
T 4hci_A 16 IEVELNDDYFNPNVITIPINESTTLLLKNK---GKSEHTFTIK 55 (100)
T ss_dssp EEEEEETTEEESSEEEECTTSCEEEEEEEC---SSSCEEEEEG
T ss_pred EEEEEECCEEeCCEEEECCCCEEEEEEEcC---CCceEEEEEe
Confidence 5777888888888888888864 3333322 2244777664
No 31
>2q3z_A Transglutaminase 2; transglutaminase 2, tissue transglutaminase, TG2, transferas; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1kv3_A 3ly6_A*
Probab=54.67 E-value=59 Score=31.66 Aligned_cols=141 Identities=13% Similarity=0.052 Sum_probs=75.4
Q ss_pred CceEEEEEEEEcCccceeeEEEecCCCCCCCceEecCeeeeeE-------eeeCCCCceEEEEEEEeceeeeEEeeeEEE
Q psy4599 1 MDVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVI-------DRVPPQTNVTHVVIVQPKSYGAFNFSFAEV 73 (201)
Q Consensus 1 ~d~tV~y~IyNvG~s~A~dV~l~D~~fp~~~F~iv~G~~~~~~-------~ri~pg~nvsH~~vv~p~~~G~fn~t~A~V 73 (201)
.|+.|...|-|..+.. +.|++.=. ... -.=.|-+...+ =.|+|++.-+..+.|.+..++..-...+.|
T Consensus 487 ~df~v~v~~~N~s~~~-~~v~~~l~---a~~-v~YtG~~~~~~~~~~~~~~~l~p~~~~~v~~~i~y~~Y~~~L~d~~~i 561 (687)
T 2q3z_A 487 SDFDVFAHITNNTAEE-YVCRLLLC---ART-VSYNGILGPECGTKYLLNLTLEPFSEKSVPLCILYEKYRDCLTESNLI 561 (687)
T ss_dssp CCEEEEEEEEECSSSC-EEEEEEEE---EEE-ECTTCCEEEEEEEEEEEEEEECTTEEEEEEEEECHHHHTTTCCTTCEE
T ss_pred CCEEEEEEEEECCCCC-EEEEEEEE---EEE-EeeCCcccceEeeeeeeEEEECCCceEEEEEEECHHHHhhhccCCCEE
Confidence 3777888888887754 55555410 000 01122222222 246777776666666655443222111111
Q ss_pred EE----EeCCCC---------------ceeEEE---ecccceeeeEEEecCCCCC--C--ceE-----EecCceeeee-e
Q psy4599 74 SY----KASENA---------------EDYTIY---NIGNSVATNVVVSDSSFPP--E--AFE-----IQGGQFKFVI-D 121 (201)
Q Consensus 74 tY----~~s~~a---------------~~y~Iy---NvG~s~A~dV~l~D~sfp~--~--~F~-----iv~G~~s~~~-~ 121 (201)
.- +..+.. ..+.|- .+|..-...|+++ +-.|. . .|. +..++..... .
T Consensus 562 ~~~a~~~v~et~~~~~~~~di~l~~P~l~I~v~g~~~v~~~~~v~v~f~-NPL~~~L~~c~~~vEG~GL~~~~~~~~~~~ 640 (687)
T 2q3z_A 562 KVRALLVEPVINSYLLAERDLYLENPEIKIRILGEPKQKRKLVAEVSLQ-NPLPVALEGCTFTVEGAGLTEEQKTVEIPD 640 (687)
T ss_dssp EEEEEEEETTTTEEEEEEEEEECBCCCCEEEEESCCSSSSCEEEEEEEE-CCSSSCBCSEEEEEECTTTCSSCEEEEECS
T ss_pred EEEEEEEECCCCeEEEEEEEEEEeCCCEEEEeCCCcccCCeEEEEEEEE-CCCCCcccceEEEEECCCCCCCceEEecCC
Confidence 11 122222 122222 2455555556665 33443 2 233 2224467778 7
Q ss_pred eeCCCCceEEEEEEeeeecceeeeee
Q psy4599 122 RVPPQTNVTHVVIVQPKSYGAFNFSF 147 (201)
Q Consensus 122 rI~pg~nvsH~~vv~p~~~G~fn~t~ 147 (201)
.|+||..+++.+.+.|++.|.-.+..
T Consensus 641 ~v~pg~~~~~~~~~~P~~~G~~~L~a 666 (687)
T 2q3z_A 641 PVEAGEEVKVRMDLVPLHMGLHKLVV 666 (687)
T ss_dssp CBCTTCEEEEEEEECCCSSSCEEEEE
T ss_pred CcCCCCEEEEEEEEEeccccceEEEE
Confidence 89999999999999999999876644
No 32
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=54.45 E-value=12 Score=26.23 Aligned_cols=83 Identities=17% Similarity=0.222 Sum_probs=46.0
Q ss_pred EEEEEEEeceeeeEEeeeEEEEEEeCCCCceeEEEecccceeeeEEEecCCCCCCceEEecCcee--eee--eeeCCCCc
Q psy4599 53 THVVIVQPKSYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFK--FVI--DRVPPQTN 128 (201)
Q Consensus 53 sH~~vv~p~~~G~fn~t~A~VtY~~s~~a~~y~IyNvG~s~A~dV~l~D~sfp~~~F~iv~G~~s--~~~--~rI~pg~n 128 (201)
+|.|.|.. ..|.+.|.|..|+-+. ...+++.|.+.. .-++.+.+..+|.+ .|.-+ ..| ..|+||..
T Consensus 3 t~~V~~~~-~~~~~~F~P~~i~v~~---Gd~V~~~n~~~~-~H~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~pG~~ 72 (106)
T 2gim_A 3 TYTVKLGS-DKGLLVFEPAKLTIKP---GDTVEFLNNKVP-PHNVVFDAALNPAK-----SADLAKSLSHKQLLMSPGQS 72 (106)
T ss_dssp EEEEEESC-TTCCSSEESSEEEECT---TCEEEEEECSSS-CCCBEECSSSSTTC-----CHHHHHHHCBCSCCCSTTCE
T ss_pred cEEEEEEe-cCCcceEcCCEEEECC---CCEEEEEECCCC-CceEEEeCCCCccc-----ccccchhccccceeeCCCCE
Confidence 45566532 1256888898886544 336677787643 34566665555531 12100 012 24789987
Q ss_pred eEEEEEEeeeecceeeee
Q psy4599 129 VTHVVIVQPKSYGAFNFS 146 (201)
Q Consensus 129 vsH~~vv~p~~~G~fn~t 146 (201)
.+++|. .|.+.|.|.|.
T Consensus 73 ~~~~f~-~~~~~G~y~y~ 89 (106)
T 2gim_A 73 TSTTFP-ADAPAGEYTFY 89 (106)
T ss_dssp EEEECC-TTCCSEEEEEE
T ss_pred EEEEEe-cCCCCceEEEE
Confidence 776443 12788876543
No 33
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=53.30 E-value=21 Score=26.71 Aligned_cols=65 Identities=17% Similarity=0.209 Sum_probs=39.1
Q ss_pred eeEEeeeEEEEEEeCCCCceeEEEecccceeeeEEEecCCCCCCceEEecCceeeeeeeeCCCCceEEEEEEeeeeccee
Q psy4599 64 GAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAF 143 (201)
Q Consensus 64 G~fn~t~A~VtY~~s~~a~~y~IyNvG~s~A~dV~l~D~sfp~~~F~iv~G~~s~~~~rI~pg~nvsH~~vv~p~~~G~f 143 (201)
+.+.|.|..|+=+.. +.+++.|.+.. .-++.+.+...+...|+ =..|+||...+++| .+.|.|
T Consensus 53 ~~~~F~P~~i~V~~G---dtV~~~N~d~~-~H~v~~~~~~~g~~~~~---------s~~l~pG~t~~~tF----~~~G~y 115 (132)
T 3c75_A 53 EKMKYLTPEVTIKAG---ETVYWVNGEVM-PHNVAFKKGIVGEDAFR---------GEMMTKDQAYAITF----NEAGSY 115 (132)
T ss_dssp ETTEESSSEEEECTT---CEEEEEECSSS-CBCCEECTTTSSSSCEE---------CCCBCTTEEEEEEE----CSCEEE
T ss_pred eeeEEeCCEEEECCC---CEEEEEECCCC-ceEEEEeCCCCCccccc---------ccccCCCCEEEEEc----CCCEEE
Confidence 468899998876443 46777787653 34455544322222232 12588999888877 466765
Q ss_pred ee
Q psy4599 144 NF 145 (201)
Q Consensus 144 n~ 145 (201)
.+
T Consensus 116 ~y 117 (132)
T 3c75_A 116 DY 117 (132)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 34
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=52.19 E-value=16 Score=25.28 Aligned_cols=72 Identities=17% Similarity=0.261 Sum_probs=42.0
Q ss_pred eeeEEeeeEEEEEEeCCCCceeEEEecccceeeeEEEecCCCCCCceEEecCceeeee--eeeCCCCceEEEEEEeeeec
Q psy4599 63 YGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVI--DRVPPQTNVTHVVIVQPKSY 140 (201)
Q Consensus 63 ~G~fn~t~A~VtY~~s~~a~~y~IyNvG~s~A~dV~l~D~sfp~~~F~iv~G~~s~~~--~rI~pg~nvsH~~vv~p~~~ 140 (201)
.|.+.|.|+.++=+..+ .+++.|.+. ..-++.+.+..+|... . ....+... -.++||...+++|. +.
T Consensus 9 ~~~~~F~P~~i~v~~G~---tV~~~n~~~-~~H~v~~~~~~~p~~~-~--~~~~~~~~~~~~~~~G~~~~~tf~----~~ 77 (99)
T 1plc_A 9 DGSLAFVPSEFSISPGE---KIVFKNNAG-FPHNIVFDEDSIPSGV-D--ASKISMSEEDLLNAKGETFEVALS----NK 77 (99)
T ss_dssp TCCSCEESSEEEECTTC---EEEEEECSS-CCBCCEECTTSSCTTC-C--HHHHCCCTTCCBCSTTCEEEEECC----SC
T ss_pred CCcceEeCCEEEECCCC---EEEEEECCC-CceEEEEeCCCCcccc-c--ccccccccCccccCCCCEEEEEEC----CC
Confidence 36688899988765543 677888874 3456777665565321 0 00000000 24789998877662 66
Q ss_pred ceeee
Q psy4599 141 GAFNF 145 (201)
Q Consensus 141 G~fn~ 145 (201)
|.|.+
T Consensus 78 G~y~~ 82 (99)
T 1plc_A 78 GEYSF 82 (99)
T ss_dssp EEEEE
T ss_pred ceEEE
Confidence 76543
No 35
>1ex0_A Coagulation factor XIII A chain; transglutaminase, blood coagulation, mutant, W279F, oxyanion, transferase; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1evu_A 1fie_A 1f13_A 1ggt_A 1ggu_A 1ggy_A 1qrk_A
Probab=51.22 E-value=37 Score=33.33 Aligned_cols=62 Identities=18% Similarity=0.162 Sum_probs=43.9
Q ss_pred ceEEEEEEEEcCccceeeEEEecCCCCCCCceEecCeeeeeEeeeCCCCceEEEEEEEeceeeeEEee
Q psy4599 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAFNFS 69 (201)
Q Consensus 2 d~tV~y~IyNvG~s~A~dV~l~D~~fp~~~F~iv~G~~~~~~~ri~pg~nvsH~~vv~p~~~G~fn~t 69 (201)
.+++++++.|-=..+-.|..|.=++ =-|..+ .......|+||+.+++.+.+.|.+.|.-++.
T Consensus 645 ~l~v~vsf~NPL~~~L~~c~~~vEG-----~GL~~~-~~~~~~~v~pg~~~~~~~~~~P~~~G~r~L~ 706 (731)
T 1ex0_A 645 DMTVTVQFTNPLKETLRNVWVHLDG-----PGVTRP-MKKMFREIRPNSTVQWEEVCRPWVSGHRKLI 706 (731)
T ss_dssp CEEEEEEEECCSSSCEEEEEEEEEE-----TTTEEE-EEEEEEEECTTCEEEEEEEECCSSCEEEEEE
T ss_pred eEEEEEEEECCCCCcccceEEEEEC-----CCCCce-eeEecCccCCCCEEEEEEEEEeccccceEEE
Confidence 4566666666655555555544211 124555 6778899999999999999999999997764
No 36
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=50.17 E-value=24 Score=26.22 Aligned_cols=50 Identities=12% Similarity=0.100 Sum_probs=27.8
Q ss_pred CceEEEEEEEeceeeeEEeeeEEEEEEeCCCCceeEEEecccceeeeEEEec
Q psy4599 50 TNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSD 101 (201)
Q Consensus 50 ~nvsH~~vv~p~~~G~fn~t~A~VtY~~s~~a~~y~IyNvG~s~A~dV~l~D 101 (201)
..-+++|.|..... .+.|.|..++-+.. +..++.+.|.|..+.-++.+.+
T Consensus 15 ~~~~~~V~v~~~~~-~~~F~p~~i~v~~G-~~V~~~~~N~~~~~~H~~~i~~ 64 (139)
T 2aan_A 15 GSGPVTIEIGSKGE-ELAFDKTELTVSAG-QTVTIRFKNNSAVQQHNWILVK 64 (139)
T ss_dssp --CCEEEEEEBCTT-SSSBSCSEEEECTT-CEEEEEEECCCSSCCBCCEEES
T ss_pred CCcCEEEEEEecCC-ccEEcCCeEEECCC-CEEEEEEEeCCCCCCeeEEEec
Confidence 44556677743322 57788888875433 4456667787754234455543
No 37
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=50.12 E-value=37 Score=23.46 Aligned_cols=12 Identities=8% Similarity=-0.028 Sum_probs=5.9
Q ss_pred eeCCCCceEEEE
Q psy4599 45 RVPPQTNVTHVV 56 (201)
Q Consensus 45 ri~pg~nvsH~~ 56 (201)
.+.||+..+++|
T Consensus 62 ~~~~g~~~~~tf 73 (98)
T 1iuz_A 62 LNSKGETVVRKL 73 (98)
T ss_dssp ECSTTCEEEEEC
T ss_pred ccCCCCEEEEEc
Confidence 355555544443
No 38
>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=48.57 E-value=74 Score=22.99 Aligned_cols=61 Identities=23% Similarity=0.267 Sum_probs=45.1
Q ss_pred EEEEEEEEcCccceeeEEEecCCCCCCCceEecCeeeeeEeeeCCCCceEEEEEEEeceeeeEEeeeEEEEE
Q psy4599 4 VVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAFNFSFAEVSY 75 (201)
Q Consensus 4 tV~y~IyNvG~s~A~dV~l~D~~fp~~~F~iv~G~~~~~~~ri~pg~nvsH~~vv~p~~~G~fn~t~A~VtY 75 (201)
+..+.|-|.|+.++. .++.. ...|.+-- + -..|+||+...=.+.-.|+..|.|+... ++.|
T Consensus 44 ~~~~~l~N~g~~~~~-f~~~~----~~~F~i~P---~--~g~L~pg~~~~i~V~F~P~~~g~~~~~l-~v~~ 104 (122)
T 2ys4_A 44 QKILLVRNIGNKNAV-FHIKT----CRPFSIEP---A--IGTLNVGESMQLEVEFEPQSVGDHSGRL-IVCY 104 (122)
T ss_dssp EEEEEEECCSSSCEE-EEEEC----CTTEEEES---S--EEEECTTCEEEEEEEECCSSSBCCCCBC-EEEE
T ss_pred EEEEEEEECCCCCEE-EEEec----CCCeEEEC---C--cCEECCCCEEEEEEEEEcCCCccEEEEE-EEEE
Confidence 457889999997663 44443 23687632 2 2889999999999999999999988765 4444
No 39
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=47.93 E-value=48 Score=25.51 Aligned_cols=62 Identities=13% Similarity=0.087 Sum_probs=31.4
Q ss_pred EEEEEEEEcCccceeeEEEecCCCCCCC----ceEecCeeeeeEeeeCCCCceEEEEEEEeceeeeEEe
Q psy4599 4 VVKYTIYNIGNSVATNVVVSDSSFPPEA----FEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAFNF 68 (201)
Q Consensus 4 tV~y~IyNvG~s~A~dV~l~D~~fp~~~----F~iv~G~~~~~~~ri~pg~nvsH~~vv~p~~~G~fn~ 68 (201)
+|++++-|.|+...-++.+...+-+-+. -.++.+.. -...|.||++-+-++...+ +.|.|-|
T Consensus 70 ~V~~~~tN~~~~~~H~~~i~~~~~~~~~~~~~~~~~~~~~--~~~~i~PG~sgt~t~tft~-~pGtY~y 135 (154)
T 2cal_A 70 TVDVTFINTNKGFGHSFDITKKGPPYAVMPVIDPIVAGTG--FSPVPKDGKFGYTDFTWHP-TAGTYYY 135 (154)
T ss_dssp EEEEEEEECCTTCCCCCEEESCCSCCCSSCCCCSEEEEBC--CCCCCBTTBEEEEEEEECC-CSEEEEE
T ss_pred EEEEEEEcCCCCeeeEEEEeecCcchhccccccccccccc--cccccCCCCceEEEEEEEE-CCceEEE
Confidence 5677777876555666666642111111 01111110 0126778885555555556 7776654
No 40
>2q3z_A Transglutaminase 2; transglutaminase 2, tissue transglutaminase, TG2, transferas; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1kv3_A 3ly6_A*
Probab=47.87 E-value=28 Score=33.96 Aligned_cols=63 Identities=14% Similarity=0.099 Sum_probs=41.3
Q ss_pred ceEEEEEEEEcCccceeeEEEecCCCCCCCceEecCeeeeeE-eeeCCCCceEEEEEEEeceeeeEEee
Q psy4599 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVI-DRVPPQTNVTHVVIVQPKSYGAFNFS 69 (201)
Q Consensus 2 d~tV~y~IyNvG~s~A~dV~l~D~~fp~~~F~iv~G~~~~~~-~ri~pg~nvsH~~vv~p~~~G~fn~t 69 (201)
.+++++++.|-=..+-.|..|.=++ =.|..++..... ..|+||+.+++.+.+.|.+.|.-++.
T Consensus 602 ~~~v~v~f~NPL~~~L~~c~~~vEG-----~GL~~~~~~~~~~~~v~pg~~~~~~~~~~P~~~G~~~L~ 665 (687)
T 2q3z_A 602 KLVAEVSLQNPLPVALEGCTFTVEG-----AGLTEEQKTVEIPDPVEAGEEVKVRMDLVPLHMGLHKLV 665 (687)
T ss_dssp CEEEEEEEECCSSSCBCSEEEEEEC-----TTTCSSCEEEEECSCBCTTCEEEEEEEECCCSSSCEEEE
T ss_pred eEEEEEEEECCCCCcccceEEEEEC-----CCCCCCceEEecCCCcCCCCEEEEEEEEEeccccceEEE
Confidence 3445555555544444444433111 114455567778 78999999999999999999987753
No 41
>3rfr_A PMOB; membrane, oxidoreductase; 2.68A {Methylocystis SP} PDB: 3chx_A
Probab=47.78 E-value=34 Score=31.43 Aligned_cols=57 Identities=12% Similarity=0.119 Sum_probs=40.4
Q ss_pred CceEEEEEEEEcCcccee-------eEEEecCCC------CCCCceEecCeeeeeEeeeCCCCceEEEEEEE
Q psy4599 1 MDVVVKYTIYNIGNSVAT-------NVVVSDSSF------PPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQ 59 (201)
Q Consensus 1 ~d~tV~y~IyNvG~s~A~-------dV~l~D~~f------p~~~F~iv~G~~~~~~~ri~pg~nvsH~~vv~ 59 (201)
|-|+++.+|-|.|+++.+ +|.+.|.+. .+++...-.|..+-. -|+||++.+-++.+.
T Consensus 298 R~l~~~~~VtN~g~~pvrlgeF~tA~vrFlnp~v~~~~~~~p~~l~a~~GL~s~~--pI~PGETrt~~V~a~ 367 (419)
T 3rfr_A 298 RELTINVKVKNGTSQPVRLGEYTAAGLRFLNPTVFTQKPDFPDYLLADRGLSNDD--VIAPGESKEIVVKIQ 367 (419)
T ss_dssp SEEEEEEEEECCSSSCBEEEEEECSSCEEECTTTCSSCCCCCTTTEESCCCCCCC--CBCTTCEEEEEEEEE
T ss_pred cEEEEEEEEecCCCCceEEeeEEEccEEEeCcccccCCCCCchhhhhccCCCCCC--CcCCCcceEEEEEee
Confidence 468899999999999865 677776444 233444455644333 899999998887765
No 42
>2e6j_A Hydin protein; PAPD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=46.94 E-value=71 Score=22.29 Aligned_cols=63 Identities=14% Similarity=0.130 Sum_probs=41.4
Q ss_pred CCceeEEEecccceeeeEEEecCC-CCCCceEEecCceeeeeeeeCCCCceEEEEEEeeeecceeeeeee
Q psy4599 80 NAEDYTIYNIGNSVATNVVVSDSS-FPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAFNFSFA 148 (201)
Q Consensus 80 ~a~~y~IyNvG~s~A~dV~l~D~s-fp~~~F~iv~G~~s~~~~rI~pg~nvsH~~vv~p~~~G~fn~t~A 148 (201)
...++.|.|.|+.+|. .++..+. -....|.+ +-.-..|+||+...=.+...|+..|.|+-+..
T Consensus 28 ~~~~~~l~N~g~~p~~-~~~~~~~~~~~~~f~v-----~p~~g~i~pg~~~~i~V~f~~~~~g~f~~~i~ 91 (112)
T 2e6j_A 28 HCYEAILYNKGSIDAL-FNMTPPTSALGACFVF-----SPKEGIIEPSGVQAIQISFSSIILGNFEEEFL 91 (112)
T ss_dssp EEEEEEEEECCSSCEE-EEECCCSSHHHHHCEE-----ESSEEEECTTBCCEEEEEECCCCCEEEEEEEC
T ss_pred EEEEEEEEECCcceEE-EEEecCCccccCcEEE-----ECCcCEECCCCEEEEEEEEECCCcceEEEEEE
Confidence 3457899999998653 2332211 00011332 12335799999999999999999999987644
No 43
>2kut_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Geobacter metallireducens}
Probab=45.77 E-value=19 Score=27.49 Aligned_cols=62 Identities=16% Similarity=0.016 Sum_probs=38.3
Q ss_pred eeEEEecccc--eeeeEEEecCCCCCCceEEecCceeeeeeeeCCCCceE--EEEEEeeeec-----ceeeeeee
Q psy4599 83 DYTIYNIGNS--VATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVT--HVVIVQPKSY-----GAFNFSFA 148 (201)
Q Consensus 83 ~y~IyNvG~s--~A~dV~l~D~sfp~~~F~iv~G~~s~~~~rI~pg~nvs--H~~vv~p~~~-----G~fn~t~A 148 (201)
..+|-|+|.. +|..|.|.-++ |...-.. -|.. ....|+||+..+ -++.+.++.. |.|.+..-
T Consensus 21 satVkN~Gt~~s~a~~V~~yl~~-p~~gg~~-vgt~--tv~~LaaG~s~t~~v~~~~~~~~~~~a~~Gsy~v~Av 91 (122)
T 2kut_A 21 SARVTNRGAAEAHNVPVAVYLGN-PAQGGVE-IGRD--TISRIPVGGTGLARVQWKATRKLAGRAANPGVPVYAV 91 (122)
T ss_dssp EEEEECCSSSCBCCCCEEECSSC-TTTCCCC-CBCC--CCSCBCTTCEEECCEEEECCCCCSSCCSCCCCCCCEE
T ss_pred EEEEEeCCCcccCcEEEEEEeCC-CccCCeE-EeeE--EccccCCCCeEEEEEEEecCCcccccccCceEEEEEE
Confidence 4578899987 66677776665 4321111 1222 246899999999 4545545443 88888654
No 44
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=44.95 E-value=21 Score=26.99 Aligned_cols=60 Identities=17% Similarity=0.176 Sum_probs=33.2
Q ss_pred EEEEEEEEcCccc----eeeEEEecCCCC------------CCCceEecCeeeeeE--eeeCCCCceEEEEEEEeceee
Q psy4599 4 VVKYTIYNIGNSV----ATNVVVSDSSFP------------PEAFEIQGGQFKFVI--DRVPPQTNVTHVVIVQPKSYG 64 (201)
Q Consensus 4 tV~y~IyNvG~s~----A~dV~l~D~~fp------------~~~F~iv~G~~~~~~--~ri~pg~nvsH~~vv~p~~~G 64 (201)
+|++++-|.|.-+ .-++.|.+.+-. ...| +..+.....| ..|.||++.++++.....+.|
T Consensus 27 ~vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~~~~~~m~~~~~~~~-~~~~~~~~~~~t~~l~pGes~~vtf~~~~l~~G 104 (128)
T 2iaa_C 27 EFTINLKHTGKLPKAAMGHNVVVSKKSDESAVATDGMKAGLNNDY-VKAGDERVIAHTSVIGGGETDSVTFDVSKLKEG 104 (128)
T ss_dssp EEEEEEEECSCSCHHHHCBCCEEEETTHHHHHHHHHHHHCGGGTT-SCTTCTTEEEECCCBCTTCEEEEEEESSCCCTT
T ss_pred EEEEEEEECCCCcccCCCceEEEccccchhhHHHhhhhccccccc-cccccchhhccceeeCCCCEEEEEEeccccCCC
Confidence 4678899999765 678887763210 0011 1112222222 357888888877754333455
No 45
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=44.66 E-value=50 Score=21.97 Aligned_cols=72 Identities=15% Similarity=0.239 Sum_probs=37.6
Q ss_pred EEEEEEeceeeeEEeeeEEEEEEeCCCCceeEEEecccceeeeEEEecCCCCCCceEEecCceeeeeeeeCCCCceEEEE
Q psy4599 54 HVVIVQPKSYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVV 133 (201)
Q Consensus 54 H~~vv~p~~~G~fn~t~A~VtY~~s~~a~~y~IyNvG~s~A~dV~l~D~sfp~~~F~iv~G~~s~~~~rI~pg~nvsH~~ 133 (201)
|.+.|.. ..|.+.|.|+.++-+.. ..+.+.|.+. ..-+|.+.+. + .....=..++||.+.+++|
T Consensus 3 ~~v~~~~-~~~~~~f~P~~i~v~~G---d~V~~~n~~~-~~H~v~~~~~--~---------~~~~~~~~~~~g~~~~~~f 66 (91)
T 1bxv_A 3 VAIKMGA-DNGMLAFEPSTIEIQAG---DTVQWVNNKL-APHNVVVEGQ--P---------ELSHKDLAFSPGETFEATF 66 (91)
T ss_dssp EEEEESC-TTSCSSEESSEEEECTT---CEEEEEECSS-CCEEEEETTC--G---------GGCEEEEECSTTCEEEEEC
T ss_pred EEEEEec-CCCccEEeCCEEEECCC---CEEEEEECCC-CCcEEEEeCC--C---------ccCcccceeCCCCEEEEEe
Confidence 4455532 12567888888865543 3556667653 2334444331 0 0111113578998777655
Q ss_pred EEeeeecceeee
Q psy4599 134 IVQPKSYGAFNF 145 (201)
Q Consensus 134 vv~p~~~G~fn~ 145 (201)
.+.|.|.+
T Consensus 67 ----~~~G~y~~ 74 (91)
T 1bxv_A 67 ----SEPGTYTY 74 (91)
T ss_dssp ----CSCEEEEE
T ss_pred ----CCCEEEEE
Confidence 56676543
No 46
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=43.83 E-value=36 Score=24.15 Aligned_cols=38 Identities=13% Similarity=0.118 Sum_probs=19.1
Q ss_pred eeEEEecCCCCCCCceEecCeeeeeEeeeCCCCceEEEEEEE
Q psy4599 18 TNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQ 59 (201)
Q Consensus 18 ~dV~l~D~~fp~~~F~iv~G~~~~~~~ri~pg~nvsH~~vv~ 59 (201)
..|.+.+-.|.++...+-.|.+ ++|.... .+.|.+++.
T Consensus 22 ~~V~~~~~~F~P~~i~V~~G~t-V~~~N~d---~~~H~v~~~ 59 (106)
T 1id2_A 22 VVVGIEKMKYLTPEVTIKAGET-VYWVNGE---VMPHNVAFK 59 (106)
T ss_dssp EEEEEETTEESSSEEEECTTCE-EEEEECS---SSCBCCEEC
T ss_pred EEEEEEecEEeCCEEEECCCCE-EEEEECC---CCcEEEEEe
Confidence 3455555556666666666643 4454222 244555543
No 47
>1z9l_A Vesicle-associated membrane protein-associated protein A; VAP-A, cytoplasmic domain, protein binding; HET: MSE; 1.70A {Rattus norvegicus} PDB: 1z9o_A 2rr3_A 3ikk_A
Probab=41.04 E-value=78 Score=23.35 Aligned_cols=64 Identities=17% Similarity=0.278 Sum_probs=42.4
Q ss_pred EEeeeE-EEEEEeCCC---CceeEEEecccc-eeeeEEEecCCCCCCceEEecCceeeeeeeeCCCCceEEEEEEeee
Q psy4599 66 FNFSFA-EVSYKASEN---AEDYTIYNIGNS-VATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 138 (201)
Q Consensus 66 fn~t~A-~VtY~~s~~---a~~y~IyNvG~s-~A~dV~l~D~sfp~~~F~iv~G~~s~~~~rI~pg~nvsH~~vv~p~ 138 (201)
..+.|. .+.+..+.+ ...++|.|..+. -|..|+-+. ++.|.+ .-....|+||+.+.=.|.+.|.
T Consensus 11 L~i~P~~~l~F~~p~~~~~~~~l~L~N~s~~~vaFKVKTT~----p~~y~V-----rP~~G~i~P~~s~~v~V~~~~~ 79 (128)
T 1z9l_A 11 LVLDPPSDLKFKGPFTDVVTTNLKLQNPSDRKVCFKVKTTA----PRRYCV-----RPNSGVIDPGSIVTVSVMLQPF 79 (128)
T ss_dssp SEEESSSEEEEESCCSSCEEEEEEEECCSSSCEEEEEEESC----GGGEEE-----ESCEEEECTTCEEEEEEEECCC
T ss_pred EEECCCCeEEEcCCCCceEEEEEEEECCCCCeEEEEEECCC----CCceEE-----eCCCcEECCCCeEEEEEEECcC
Confidence 444554 566655444 457899998776 566766554 245533 2245789999999999998874
No 48
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=40.58 E-value=8.9 Score=26.59 Aligned_cols=74 Identities=15% Similarity=0.204 Sum_probs=40.4
Q ss_pred eeeEEeeeEEEEEEeCCCCceeEEEecccceeeeEEEecCCCCCCceEEecCceeeeeeeeCCCCceEEEEEEeeeecce
Q psy4599 63 YGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGA 142 (201)
Q Consensus 63 ~G~fn~t~A~VtY~~s~~a~~y~IyNvG~s~A~dV~l~D~sfp~~~F~iv~G~~s~~~~rI~pg~nvsH~~vv~p~~~G~ 142 (201)
.|.+.|.|+.|+=+. ...+++.|.+. ..-++.+.+..+|. .++.-.+.+...=-.|+||...+++|. +.|.
T Consensus 9 ~~~~~F~P~~i~v~~---G~tV~~~n~~~-~~H~~~~~~~~~p~-g~~~~~~~~~~~~~~~~~G~~~~~~f~----~~G~ 79 (99)
T 1byp_A 9 DGGLAFVPSDLSIAS---GEKITFKNNAG-FPHNDLFDKKEVPA-GVDVTKISMPEEDLLNAPGEEYSVTLT----EKGT 79 (99)
T ss_dssp TSCCSEESSEEEECT---TEEEEEEECSS-CCBCCEECTTSSCT-TCCHHHHSCCTTCCBCSTTCEEEEEEC----SCEE
T ss_pred CCcceEeCCEEEECC---CCEEEEEECCC-CcceEEEeCCCCcc-ccccccccccccceeeCCCCEEEEEeC----CCcE
Confidence 356888888886443 33677788874 34556666655653 211000000000025789988777663 6675
Q ss_pred eee
Q psy4599 143 FNF 145 (201)
Q Consensus 143 fn~ 145 (201)
|.+
T Consensus 80 y~~ 82 (99)
T 1byp_A 80 YKF 82 (99)
T ss_dssp EEE
T ss_pred EEE
Confidence 533
No 49
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=40.19 E-value=45 Score=23.49 Aligned_cols=65 Identities=12% Similarity=0.193 Sum_probs=36.5
Q ss_pred eeEEeeeEEEEEEeCCCCceeEEEecccceeeeEEEecCCCCCCceEEecCceeeeeeeeCCCCceEEEEEEeeeeccee
Q psy4599 64 GAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAF 143 (201)
Q Consensus 64 G~fn~t~A~VtY~~s~~a~~y~IyNvG~s~A~dV~l~D~sfp~~~F~iv~G~~s~~~~rI~pg~nvsH~~vv~p~~~G~f 143 (201)
+.+.|.|..++=+.. ..+++.|.+. ..-+|.+.+..-..+.|. -..|+||...+++| .+.|.|
T Consensus 26 ~~~~F~P~~i~v~~G---d~V~~~N~d~-~~H~v~~~~~~~g~~~~~---------~~~~~pG~~~~~tf----~~~G~y 88 (105)
T 2ov0_A 26 AKMKYETPELHVKVG---DTVTWINREA-MPHNVHFVAGVLGEAALK---------GPMMKKEQAYSLTF----TEAGTY 88 (105)
T ss_dssp ETTEESSSEEEECTT---CEEEEEECSS-SCBCCEECTTTSSSSCEE---------CCCBCTTEEEEEEE----CSCEEE
T ss_pred eecEEcCCEEEECCC---CEEEEEECCC-CCEEEEEcCCCCCccccc---------ccccCCCCEEEEEe----CCCEEE
Confidence 457788888866543 3567778865 334454433110001121 12488999887776 467755
Q ss_pred ee
Q psy4599 144 NF 145 (201)
Q Consensus 144 n~ 145 (201)
.+
T Consensus 89 ~y 90 (105)
T 2ov0_A 89 DY 90 (105)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 50
>1row_A SSP-19, MSP-domain protein like family member; beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=40.02 E-value=64 Score=23.73 Aligned_cols=59 Identities=15% Similarity=0.167 Sum_probs=41.5
Q ss_pred eEEEEEEeCCCCceeEEEecccc-eeeeEEEecCCCCCCceEEecCceeeeeeeeCCCCceEEEEEEee
Q psy4599 70 FAEVSYKASENAEDYTIYNIGNS-VATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQP 137 (201)
Q Consensus 70 ~A~VtY~~s~~a~~y~IyNvG~s-~A~dV~l~D~sfp~~~F~iv~G~~s~~~~rI~pg~nvsH~~vv~p 137 (201)
|.++.|..+++.....|.|..+. -|..|.-+++ +.|-| .-....|+||+.+.=.+.+.|
T Consensus 7 P~~l~F~~~~~~~~l~L~N~t~~~vaFKVKtT~p----~~y~V-----rP~~G~I~P~~~~~i~I~~q~ 66 (109)
T 1row_A 7 PPACTVPAAGVSSTHKLVNGGAEKIVFKIKSSNN----NEYRI-----APVFGFVDPSGSKDVVITRTA 66 (109)
T ss_dssp SSSEEEETTCEEEEEEEEECSSSCEEEEEEESCS----SSEEE-----ECSEEEECTTEEEEEEEEECS
T ss_pred CCEeEEeCCCCeEEEEEEcCCCCeEEEEEEeCCC----CceEE-----cCCceEECCCCeEEEEEEeCC
Confidence 33344555555578899998776 6788887753 45533 234578999999999998887
No 51
>1vjj_A Protein-glutamine glutamyltransferase E; transglutaminase 3, X-RAY crystallography, metalloenzyme, calcium ION; HET: GDP; 1.90A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1sgx_A* 1l9m_A 1l9n_A* 1nud_A 1nuf_A 1nug_A 1rle_A*
Probab=38.88 E-value=2.5e+02 Score=27.30 Aligned_cols=141 Identities=11% Similarity=0.144 Sum_probs=75.5
Q ss_pred CceEEEEEEEEcCccceeeEEEec-------CCCCCCCceEecCeeeeeEeeeCCCCceEEEEEEEeceeee-------E
Q psy4599 1 MDVVVKYTIYNIGNSVATNVVVSD-------SSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGA-------F 66 (201)
Q Consensus 1 ~d~tV~y~IyNvG~s~A~dV~l~D-------~~fp~~~F~iv~G~~~~~~~ri~pg~nvsH~~vv~p~~~G~-------f 66 (201)
.|+.|...|-|..+.. ..|++.= ++-+...|.-- ..-=.|+|++.-+..+.|.+..++. +
T Consensus 496 ~df~v~l~~~N~s~~~-~~v~~~l~a~~v~YtG~~~~~~~~~-----~~~v~L~p~~~~~i~~~i~y~~Y~~~L~d~~~i 569 (692)
T 1vjj_A 496 KEVNLVLLLKNLSRDT-KTVTVNMTAWTIIYNGTLVHEVWKD-----SATMSLDPEEEAEHPIKISYAQYERYLKSDNMI 569 (692)
T ss_dssp SCEEEEEEEEECSSSC-EEEEEEEEEEEECTTCCEEEEEEEE-----EEEEEECTTCEEEEEEEECHHHHHTTCCTTCEE
T ss_pred CCEEEEEEEEECCCCC-EEEEEEEEEEEEeeCCccccceEEe-----eEEEEECCCceEEEEEEECHHHHhhhcccCCeE
Confidence 3778888888887754 5555541 22222211110 0112467777777766666544332 2
Q ss_pred Eee-----------eEEEEEEeCCCCceeEEE---ecccceeeeEEEecCCCCC--C--ceEE-----ecCceeeeeeee
Q psy4599 67 NFS-----------FAEVSYKASENAEDYTIY---NIGNSVATNVVVSDSSFPP--E--AFEI-----QGGQFKFVIDRV 123 (201)
Q Consensus 67 n~t-----------~A~VtY~~s~~a~~y~Iy---NvG~s~A~dV~l~D~sfp~--~--~F~i-----v~G~~s~~~~rI 123 (201)
.++ .++-.++...-...+.|- .+|+.-...|+++ +-.|. . .|.+ ..+........|
T Consensus 570 ~~~a~~~v~et~~~~~~~di~l~~P~l~I~v~g~~~v~~~l~v~v~f~-NPL~~~L~~c~~~vEG~GL~~~~~~~~~~~v 648 (692)
T 1vjj_A 570 RITAVCKVPDESEVVVERDIILDNPTLTLEVLNEARVRKPVNVQMLFS-NPLDEPVRDCVLMVEGSGLLLGNLKIDVPTL 648 (692)
T ss_dssp EEEEEEECTTSCCEEEEEEEECBCCCEEEEECSCCBTTSCEEEEEEEE-CCSSSCBCSEEEEEECTTTSSSCEEEEECCB
T ss_pred EEEEEEEECCCceEEEEEEEEEcCCCEEEEeCCCcccCCeEEEEEEEE-CCCCCcccceEEEEECCCCCCCceEEEcCcc
Confidence 221 111111111111122222 3455555555555 33443 2 2332 234567788899
Q ss_pred CCCCceEEEEEEeeeecceeeeeee
Q psy4599 124 PPQTNVTHVVIVQPKSYGAFNFSFA 148 (201)
Q Consensus 124 ~pg~nvsH~~vv~p~~~G~fn~t~A 148 (201)
+||..+++.+.+.|.+.|.-.+...
T Consensus 649 ~pg~~~~~~~~~~P~~~G~r~L~a~ 673 (692)
T 1vjj_A 649 GPKERSRVRFDILPSRSGTKQLLAD 673 (692)
T ss_dssp CTTCEEEEEEEECCCSCEEEEEEEE
T ss_pred CCCCEEEEEEEEEeccccceEEEEE
Confidence 9999999999999999998776443
No 52
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=38.30 E-value=56 Score=24.06 Aligned_cols=21 Identities=10% Similarity=0.200 Sum_probs=14.7
Q ss_pred eCCCCceEEEEEEEeceeeeEEe
Q psy4599 46 VPPQTNVTHVVIVQPKSYGAFNF 68 (201)
Q Consensus 46 i~pg~nvsH~~vv~p~~~G~fn~ 68 (201)
|.||++.+.+|. +.+.|.|.|
T Consensus 101 l~pGet~~v~f~--~~~pG~y~f 121 (139)
T 2aan_A 101 ANGNETVEVTFT--APAAGTYLY 121 (139)
T ss_dssp BCTTCEEEEEEE--CCSSEEEEE
T ss_pred cCCCCEEEEEEE--CCCCeEEEE
Confidence 789998876664 446776654
No 53
>4acq_A Alpha-2-macroglobulin; hydrolase inhibitor, proteinase inhibitor, irreversible PROT inhibitor, conformational change, blood plasma inhibitor; HET: MEQ NAG MAN; 4.30A {Homo sapiens}
Probab=37.41 E-value=89 Score=32.55 Aligned_cols=68 Identities=22% Similarity=0.158 Sum_probs=47.2
Q ss_pred ceEEEEEEEEcCccceeeEEEecCCCCCCCceEecCeeeeeEeeeCCCCceEEEEEEEeceeeeEEeeeEE
Q psy4599 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAFNFSFAE 72 (201)
Q Consensus 2 d~tV~y~IyNvG~s~A~dV~l~D~~fp~~~F~iv~G~~~~~~~ri~pg~nvsH~~vv~p~~~G~fn~t~A~ 72 (201)
.+.+..+|+|..+. +.+|++.=. .++.|++..+.....=-.|++|+..+..+.|+|++.|..+++-..
T Consensus 784 ~~~l~~~V~N~~~~-~~~v~V~l~--~~~~~~~~~~~~~~~~v~l~~~~~~~v~f~v~p~~~G~~~i~v~a 851 (1451)
T 4acq_A 784 AFTLKATVLNYLPK-CIRVSVQLE--ASPAFLAVPVEKEQAPHCICANGRQTVSWAVTPKSLGNVNFTVSA 851 (1451)
T ss_dssp CEEEEEEEEECSSS-CEEEEEEEC--CCTTEEEEESCSCCCCEEECTTEEEEEEEEEEECSCEEEEEEEEE
T ss_pred EEEEEEEEEeccCc-cEEEEEEEE--cCCCeEeecCCCCceEEEECCCCeEEEEEEEEECccceEEEEEEE
Confidence 36789999999764 444444321 234588876532222346999999999999999999988776544
No 54
>1g0d_A Protein-glutamine gamma-glutamyltransferase; tissue transglutaminase,acyltransferase; 2.50A {Pagrus major} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4
Probab=36.92 E-value=50 Score=32.24 Aligned_cols=62 Identities=13% Similarity=0.076 Sum_probs=39.2
Q ss_pred ceEEEEEEEEcCccceeeEEEecCCCCCCCceEecCeeeeeE-eeeCCCCceEEEEEEEeceeeeEEee
Q psy4599 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVI-DRVPPQTNVTHVVIVQPKSYGAFNFS 69 (201)
Q Consensus 2 d~tV~y~IyNvG~s~A~dV~l~D~~fp~~~F~iv~G~~~~~~-~ri~pg~nvsH~~vv~p~~~G~fn~t 69 (201)
.+++++++.|-=..+-.|..|.= |-=-+..+ ..... ..|+||+.+++.+.+.|.+.|.-.+.
T Consensus 600 ~l~a~vsf~NPL~~~L~~c~~~v-----EG~GL~~~-~~~~~~~~v~Pg~~~~~~~~~~P~~~G~r~L~ 662 (695)
T 1g0d_A 600 PLTAYVSFTNPLPVPLKGGVFTL-----EGAGLLSA-TQIHVNGAVAPSGKVSVKLSFSPMRTGVRKLL 662 (695)
T ss_dssp CEEEEEEEECCSSSCEESCEEEE-----EETTTEEE-EEEECSSEECTTCEEEEEEEECCSSCEEEEEE
T ss_pred eEEEEEEEECCCCCcccceEEEE-----ECCCCCcc-eEEecCCCcCCCCEEEEEEEEEcCCccceEEE
Confidence 34455555554444444333321 11113444 56667 78999999999999999999997753
No 55
>2cri_A Vesicle-associated membrane protein-associated protein A; VAP-A, VAP-33, beta sandwitch fold, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=36.84 E-value=1.1e+02 Score=23.12 Aligned_cols=65 Identities=17% Similarity=0.274 Sum_probs=42.7
Q ss_pred EEeeeE-EEEEEeCCC---CceeEEEecccc-eeeeEEEecCCCCCCceEEecCceeeeeeeeCCCCceEEEEEEeeee
Q psy4599 66 FNFSFA-EVSYKASEN---AEDYTIYNIGNS-VATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKS 139 (201)
Q Consensus 66 fn~t~A-~VtY~~s~~---a~~y~IyNvG~s-~A~dV~l~D~sfp~~~F~iv~G~~s~~~~rI~pg~nvsH~~vv~p~~ 139 (201)
..+.|. .+.|..+.+ ...+.|.|..+. -|..|+-+. ++.|-+ .-....|+||+.+.=.|.+.|..
T Consensus 15 L~i~P~~~L~F~~p~~~~~~~~l~L~N~s~~~VaFKVKTT~----p~~y~V-----rP~~GiI~P~~s~~v~V~l~~~~ 84 (147)
T 2cri_A 15 LVLDPPSDLKFKGPFTDVVTTNLKLQNPSDRKVCFKVKTTA----PRRYCV-----RPNSGIIDPGSIVTVSVMLQPFD 84 (147)
T ss_dssp SEEESSSEEEEECCSSSCCCEEEEEECCSSSCEEEEEEESC----TTSEEE-----ESSEEECCTTCEEEEEEEECCCC
T ss_pred EEECCCCeEEEeCCCCceEEEEEEEECCCCCcEEEEEECCC----CccEEE-----cCCCcEECCCCeEEEEEEECCCc
Confidence 344444 555554433 567999999876 566776553 245533 22357899999999999988743
No 56
>1bw3_A Barwin, basic barley SEED protein; lectin; NMR {Hordeum vulgare} SCOP: b.52.1.2 PDB: 1bw4_A
Probab=36.80 E-value=48 Score=25.53 Aligned_cols=41 Identities=12% Similarity=0.171 Sum_probs=30.3
Q ss_pred EEEEEcCccceeeEEEecC------CCC-CCCceEec--------CeeeeeEeeeC
Q psy4599 7 YTIYNIGNSVATNVVVSDS------SFP-PEAFEIQG--------GQFKFVIDRVP 47 (201)
Q Consensus 7 y~IyNvG~s~A~dV~l~D~------~fp-~~~F~iv~--------G~~~~~~~ri~ 47 (201)
+.|.|.++..-..|.+.|- ..+ +++|+-+. |.+.++|+.++
T Consensus 67 v~Vtn~~nGksV~V~VvD~CP~ggLDLS~~~AF~~Ia~~g~G~~~G~i~V~w~~V~ 122 (125)
T 1bw3_A 67 LRVTNPATGAQITARIVDQCANGGLDLDWDTVFTKIDTNGIGYQQGHLNVNYQFVD 122 (125)
T ss_dssp EEEEETTTTEEEEEEEEECCSSSSCCSCSSSSHHHHCSSCHHHHHSEEEEEEEEEC
T ss_pred EEeEeCCCCCEEEEEEEEeCCCCCCCCCCHHHHHHHhccCCcccCcEEEEEEEEEe
Confidence 5677887777888999984 355 67787664 56788888876
No 57
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=35.70 E-value=25 Score=28.04 Aligned_cols=90 Identities=9% Similarity=0.160 Sum_probs=48.0
Q ss_pred EEEEEEEeceeeeEEeeeEEEEEEeCCCCceeEEEecccce----eeeEEEecCCCCC-----------CceEEecCcee
Q psy4599 53 THVVIVQPKSYGAFNFSFAEVSYKASENAEDYTIYNIGNSV----ATNVVVSDSSFPP-----------EAFEIQGGQFK 117 (201)
Q Consensus 53 sH~~vv~p~~~G~fn~t~A~VtY~~s~~a~~y~IyNvG~s~----A~dV~l~D~sfp~-----------~~F~iv~G~~s 117 (201)
+.++.|.... ...|.+.+|+=-..-+...+.+-|.|+.+ --++.|....... ..| +-.+...
T Consensus 42 ~~~V~I~~~d--~m~F~P~~itV~kaG~~Vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~v~~~~m~~~~~~~-v~~~d~~ 118 (167)
T 3ay2_A 42 NCAATVESND--NMQFNTKDIQVSKACKEFTITLKHTGTQPKASMGHNLVIAKAEDMDGVFKDGVGAADTDY-VKPDDAR 118 (167)
T ss_dssp CCEEEEEECT--TSCBSCSEEEEETTCSSEEEEEEECSCSCHHHHCBCCEEEEGGGHHHHHHHHGGGGGGTT-SCTTCTT
T ss_pred ceEEEEEeCC--CceEecceEEEecCCCEEEEEEEECCCCccccccceEEeccCcchhhhHHHhhhcccccc-ccccccc
Confidence 3455565532 45788888877223455677888988765 2445554321000 000 0001111
Q ss_pred e--eeeeeCCCCceEEEEEEeeeecceeee
Q psy4599 118 F--VIDRVPPQTNVTHVVIVQPKSYGAFNF 145 (201)
Q Consensus 118 ~--~~~rI~pg~nvsH~~vv~p~~~G~fn~ 145 (201)
+ .=..|.||...+.+|.+-+++.|.|.|
T Consensus 119 vl~~t~~l~pGet~svtf~~~~lkpG~Y~f 148 (167)
T 3ay2_A 119 VVAHTKLIGGGEESSLTLDPAKLADGDYKF 148 (167)
T ss_dssp EEEECCCBCTTCEEEEEECGGGGTTSCEEE
T ss_pred hhccceeeCCCCEEEEEEecCCCCCcEEEE
Confidence 1 113578888888777655567787654
No 58
>4fxk_B Complement C4-A alpha chain; immune system, proteolytic cascade; HET: NAG BMA; 3.60A {Homo sapiens} PDB: 4fxg_B*
Probab=35.08 E-value=64 Score=30.67 Aligned_cols=65 Identities=22% Similarity=0.222 Sum_probs=43.5
Q ss_pred eEEEEEEEEcCccceeeEEEecCCCCCCCceEecCeeeeeEeeeCCCCceEEEEEEEeceeeeEEeee
Q psy4599 3 VVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAFNFSF 70 (201)
Q Consensus 3 ~tV~y~IyNvG~s~A~dV~l~D~~fp~~~F~iv~G~~~~~~~ri~pg~nvsH~~vv~p~~~G~fn~t~ 70 (201)
+.+..+|+|..+. +..|++.=. +.+.|.+..+....+==.|+||+..+..+.|+|++.|..+++-
T Consensus 170 ~~i~~~V~N~~~~-~~~v~v~l~--~~~~~~~~~~~~~~~~~~v~a~~~~~v~f~i~~~~~G~~~i~v 234 (767)
T 4fxk_B 170 LELRPVLYNYLDK-NLTVSVHVS--PVEGLCLAGGGGLAQQVLVPAGSARPVAFSVVPTAAAAVSLKV 234 (767)
T ss_dssp EEECCEEEECSSS-CEEEEEEEC--CCTTEECSSSSCCCEEEEECSSCEEECCEEEEECSCSEEEEEE
T ss_pred EEEEEEEEECCCC-CEEEEEEEE--ecCCeEEecCCceeEEEEEcCCCeEEEEEEEEECccCcEEEEE
Confidence 5778899998764 344444321 2344655544332223359999999999999999999877653
No 59
>1m1s_A WR4; structural genomics, major sperm protein, bioinformatics, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=34.43 E-value=1.2e+02 Score=22.73 Aligned_cols=64 Identities=19% Similarity=0.178 Sum_probs=45.9
Q ss_pred EEeeeEEEEEEeCCCCceeEEEecccc-eeeeEEEecCCCCCCceEEecCceeeeeeeeCCCCceEEEEEEeee
Q psy4599 66 FNFSFAEVSYKASENAEDYTIYNIGNS-VATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 138 (201)
Q Consensus 66 fn~t~A~VtY~~s~~a~~y~IyNvG~s-~A~dV~l~D~sfp~~~F~iv~G~~s~~~~rI~pg~nvsH~~vv~p~ 138 (201)
++..|.++.|..........|.|..+. -|..|+-+++ +.|.| .-.+..|+||+.+.=.+.+.|.
T Consensus 11 ~~~~p~~l~F~~~gg~~~l~L~N~t~~~vAFKVKtT~p----~~YrV-----rP~~G~I~Pg~~~~I~I~~q~~ 75 (116)
T 1m1s_A 11 INVDPPTGNYPATGGNSTHNITSESDSRLAFKVKSSNN----EHYRV-----RPVYGFVDAKGKSKLDINRLPG 75 (116)
T ss_dssp EEEESSEEEECTTCEEEEEEEEECSSSEEEEEEEESCT----TTEEE-----ECSEEEECTTCEEEEEEEECSC
T ss_pred eecCCCeEEEecCCCEEEEEEECCCCCeEEEEEEecCC----CceEE-----cCCceEECCCCeEEEEEEeCCC
Confidence 344555666666666788999999776 7888887763 55543 3345789999999988888863
No 60
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=33.68 E-value=78 Score=23.74 Aligned_cols=38 Identities=18% Similarity=0.161 Sum_probs=26.6
Q ss_pred eeEEeeeEEEEEEeCCCCceeEEEecccce----eeeEEEec
Q psy4599 64 GAFNFSFAEVSYKASENAEDYTIYNIGNSV----ATNVVVSD 101 (201)
Q Consensus 64 G~fn~t~A~VtY~~s~~a~~y~IyNvG~s~----A~dV~l~D 101 (201)
+...|++.+++-+..-+...+.+-|.|+-+ -=++.|..
T Consensus 11 d~m~F~p~~i~V~~G~~~vtv~~~N~g~~~~~~m~H~~vi~~ 52 (129)
T 1cuo_A 11 DTMTYSTRSISVPASCAEFTVNFEHKGHMPKTGMGHNWVLAK 52 (129)
T ss_dssp SSSCCSCSEEEEETTCSEEEEEEEECSSSCHHHHCBCCEEEE
T ss_pred CCceEccCeEEEcCCCeEEEEEEEECCCCcccccccceEEec
Confidence 467889999988776456778888988754 34445443
No 61
>1r4x_A Gamma1-COP, coatomer gamma subunit; appendage, beta sandwich, ADP-ribosylation factors, protein transport; 1.90A {Homo sapiens} SCOP: b.1.10.3 d.105.1.2
Probab=33.67 E-value=1.4e+02 Score=25.75 Aligned_cols=122 Identities=16% Similarity=0.210 Sum_probs=69.5
Q ss_pred ceEEEEEEEEcCcccee-eEEEecCCCCCCCceEecCeeeeeEeeeCCCCceEEEEEEE-eceeeeE---EeeeEEEEEE
Q psy4599 2 DVVVKYTIYNIGNSVAT-NVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQ-PKSYGAF---NFSFAEVSYK 76 (201)
Q Consensus 2 d~tV~y~IyNvG~s~A~-dV~l~D~~fp~~~F~iv~G~~~~~~~ri~pg~nvsH~~vv~-p~~~G~f---n~t~A~VtY~ 76 (201)
.|+++|+|-|.=+...+ ||++.=+. .+..+. ......++|++|+.-+--++++ |...+.+ .| ...+.|+
T Consensus 59 hiVlQF~i~NTL~dq~LenVsV~~~~--~d~~~~---~~~ipi~~L~~~~~g~~yV~l~~~~~~~~~~~~tf-~~~LkF~ 132 (275)
T 1r4x_A 59 HMVFQFDCTNTLNDQTLENVTVQMEP--TEAYEV---LXYVPARSLPYNQPGTCYTLVALPKEDPTAVACTF-SCMMKFT 132 (275)
T ss_dssp EEEEEEEEEECCTTEEEEEEEEEEEE--SSSCEE---EEEECEEEECTTCCEEEEEEEECCSSSTTCCCEEE-EEEEEEE
T ss_pred cEEEEEEeEEccCcEEEeeEEEEEEc--CCCceE---EEeeeccccCCCCCccEEEEEEcCCCcccccccee-EEEEEEE
Confidence 57899999998776443 55554321 222333 4566799999999877777776 4311211 12 2456666
Q ss_pred eCCCC------------ceeEEEecccceeeeEEEecCCCCCCceEEecCceeeeeeeeCCCCceEEEEEEeeeec
Q psy4599 77 ASENA------------EDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSY 140 (201)
Q Consensus 77 ~s~~a------------~~y~IyNvG~s~A~dV~l~D~sfp~~~F~iv~G~~s~~~~rI~pg~nvsH~~vv~p~~~ 140 (201)
.-+-. .+|.|-+ ++|+-..|=.. +..|++...||++.++....=++.|...+.
T Consensus 133 vke~Dp~tGe~~deGyeDEY~lEd--------lel~~~D~i~p---~~~~nF~~~We~l~~~~E~~~tf~L~~~~s 197 (275)
T 1r4x_A 133 VKDCDPTTGETDDEGYEDEYVLED--------LEVTVADHIQK---VMKLNFEAAWDEVGDEFEKEETFTLSTIKT 197 (275)
T ss_dssp EEEBCTTTCCBCSCCEEEEEECCC--------EEECGGGGEEE---CCCSCHHHHHHHHCSTTCEEEEEEETTCCC
T ss_pred EEeccCCCCCcCCCCccceEEccc--------eeechhhEEee---cccCchHHHHHhcCCccceEEEEEccCcCc
Confidence 54311 2222222 22222111000 114678889999988888888888875553
No 62
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=32.04 E-value=67 Score=23.84 Aligned_cols=38 Identities=13% Similarity=0.121 Sum_probs=22.0
Q ss_pred eeEEEecCCCCCCCceEecCeeeeeEeeeCCCCceEEEEEEE
Q psy4599 18 TNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQ 59 (201)
Q Consensus 18 ~dV~l~D~~fp~~~F~iv~G~~~~~~~ri~pg~nvsH~~vv~ 59 (201)
..|.+.+-.|.++..++-.|.+ ++|.-- ..+.|.+++.
T Consensus 48 ~~V~~~~~~F~P~~i~V~~Gdt-V~~~N~---d~~~H~v~~~ 85 (132)
T 3c75_A 48 VVVGIEKMKYLTPEVTIKAGET-VYWVNG---EVMPHNVAFK 85 (132)
T ss_dssp EEEEEETTEESSSEEEECTTCE-EEEEEC---SSSCBCCEEC
T ss_pred EEEEEeeeEEeCCEEEECCCCE-EEEEEC---CCCceEEEEe
Confidence 5566666667777777777753 455422 2345666554
No 63
>3prx_B Cobra venom factor; immune system, complement, immune SYS complex; HET: NAG; 4.30A {Naja kaouthia} PDB: 3pvm_B*
Probab=31.03 E-value=1.5e+02 Score=31.43 Aligned_cols=66 Identities=15% Similarity=0.025 Sum_probs=45.5
Q ss_pred ceEEEEEEEEcCccceeeEEEecCCCCCCCceEecC--eeeeeEeeeCCCCceEEEEEEEeceeeeEEeee
Q psy4599 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGG--QFKFVIDRVPPQTNVTHVVIVQPKSYGAFNFSF 70 (201)
Q Consensus 2 d~tV~y~IyNvG~s~A~dV~l~D~~fp~~~F~iv~G--~~~~~~~ri~pg~nvsH~~vv~p~~~G~fn~t~ 70 (201)
.+.+..+|||-.+.. ..|++.=. .++.|.+.+. .....--.|+||+..+..+.|+|++.|..+++-
T Consensus 829 q~~l~v~VfNy~~~~-~~V~V~L~--~s~~~~~~~~~~~~~~q~v~v~a~~~~~v~f~i~p~~~G~~~i~v 896 (1642)
T 3prx_B 829 QVEIRAILHNYVNED-IYVRVELL--YNPAFCSASTKGQRYRQQFPIKALSSRAVPFVIVPLEQGLHDVEI 896 (1642)
T ss_dssp CEEEEEEEEECSSSC-EEEEEEEC--CCTTEEESCCSSSCCEEEEEECSSEEEEEEEEEEECSCEEEEEEE
T ss_pred EEEEEEEEEcCCCCc-EEEEEEEE--cCCCeEeeccCCCcceeEEEECCCCeEEEEEEEEEeecccEEEEE
Confidence 367899999998854 44444321 2345766541 111223479999999999999999999988764
No 64
>1pzd_A Coatomer gamma subunit; platform domain, appendage domain, EAR domain, endocytosis/exocytosis complex; 2.31A {Bos taurus} SCOP: b.1.10.3 d.105.1.2
Probab=30.42 E-value=2.7e+02 Score=24.25 Aligned_cols=120 Identities=17% Similarity=0.220 Sum_probs=70.9
Q ss_pred ceEEEEEEEEcCccce-eeEEEecCCCCCCCceEecCeeeeeEeeeCCCCceEEEEEEE-ece-----eeeEEeeeEEEE
Q psy4599 2 DVVVKYTIYNIGNSVA-TNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQ-PKS-----YGAFNFSFAEVS 74 (201)
Q Consensus 2 d~tV~y~IyNvG~s~A-~dV~l~D~~fp~~~F~iv~G~~~~~~~ri~pg~nvsH~~vv~-p~~-----~G~fn~t~A~Vt 74 (201)
.|+++|+|-|.=+... .||.+.=+. .+.|+. ......++|++|+.-+--++++ |.. .|.| ...+.
T Consensus 106 hiVlQF~~~NTL~dq~LenV~V~~~~--~~~~~~---~~~ip~~~L~~~~~g~~yv~~~~~~~~~~~~~~~f---~~~Lk 177 (322)
T 1pzd_A 106 HMVFQFDCTNTLNDQTLENVTVQMEP--SEAYEV---LCYVPARSLPYNQPGTCYTLVALPKEDPTAVACTF---SCVMK 177 (322)
T ss_dssp EEEEEEEEEECCTTEEEEEEEEEEEE--SSSCEE---EEEECEEEECBTCCEEEEEEEECCSSCTTCCCEEE---EEEEE
T ss_pred cEEEEEEEEEccCceEEeeEEEEEec--CCCceE---EEEEEHhHCCCCCCeeEEEEEEecCCCCCccceEE---EEEEE
Confidence 5889999999877644 355554331 233666 4566799999999777777775 431 2333 24566
Q ss_pred EEeCCC----------C--ceeEEEecccceeeeEEEecCCCCCCceEEecCceeeeeeeeCCCCceEEEEEEeeeec
Q psy4599 75 YKASEN----------A--EDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSY 140 (201)
Q Consensus 75 Y~~s~~----------a--~~y~IyNvG~s~A~dV~l~D~sfp~~~F~iv~G~~s~~~~rI~pg~nvsH~~vv~p~~~ 140 (201)
|+.-+- + .+|.|-+ ++|+-..|=.- +..|++...||+++.+....-++.|...+.
T Consensus 178 F~vke~Dp~TGe~~deGyeDEY~lEd--------lel~~~D~i~p---~~~~nF~~~We~l~~~~E~~~tf~L~~~~s 244 (322)
T 1pzd_A 178 FTVKDCDPTTGEADDEGYEDEYVLED--------LEVTIADHIQK---VMKLNFEAAWDEVGDEFQKEETFTLSTIKT 244 (322)
T ss_dssp EEEEEBCTTTCCBCSCCEEEEEECCC--------EEECGGGGEEE---CCCSCHHHHHHHHCSTTCEEEEEEESSCCC
T ss_pred EEEEeecCCCCCcCCCCccceEEccc--------eeechhhEeee---cccCchHHHHHhcCCccceEEEEEccCcCc
Confidence 665321 1 2232222 22222111000 114678889999988888888888876553
No 65
>1yew_A Particulate methane monooxygenase, B subunit; membrane protein, beta barrel, oxidoreductase; 2.80A {Methylococcus capsulatus} PDB: 3rgb_A
Probab=30.19 E-value=1.2e+02 Score=27.55 Aligned_cols=58 Identities=26% Similarity=0.255 Sum_probs=0.0
Q ss_pred CceEEEEEEEEcCcccee-------eEEEecCCC------CCCCceEecCeeeeeEee-eCCCCceEEEEEEE
Q psy4599 1 MDVVVKYTIYNIGNSVAT-------NVVVSDSSF------PPEAFEIQGGQFKFVIDR-VPPQTNVTHVVIVQ 59 (201)
Q Consensus 1 ~d~tV~y~IyNvG~s~A~-------dV~l~D~~f------p~~~F~iv~G~~~~~~~r-i~pg~nvsH~~vv~ 59 (201)
|-|+++.+|-|.|+++.+ +|.+.+.+. .+++. +-.+-++++=+. |+||++.+-++.+.
T Consensus 264 R~l~~~~~VtN~g~~pvrlgeF~tA~vrFln~~~~~~~~~~P~~l-la~~gL~vsd~~pI~PGETr~~~v~a~ 335 (382)
T 1yew_A 264 RAMRMKLTITNHGNSPIRLGEFYTASVRFLDSDVYKDTTGYPEDL-LAEDGLSVSDNSPLAPGETRTVDVTAS 335 (382)
T ss_dssp SEEEEEEEEEECSSSCEEEEEEECSSCEEECTTTCCCCSCCCGGG-EETTCEEESCCSCBCTTCEEEEEEEEE
T ss_pred cEEEEEEEEEcCCCCceEeeeEEeccEEEeCCcccccCCCChHHh-hccCCceeCCCCCcCCCceeEEEEEee
No 66
>2hr0_B Complement C3 alpha' chain; complement component C3B, immune system; HET: THC; 2.26A {Homo sapiens} PDB: 2icf_B* 2wii_B* 2win_B* 3g6j_B 3l5n_B* 2a73_B* 2i07_B* 2xwj_B* 2xwb_B* 2a74_C* 2ice_C* 2qki_C* 3l3o_F* 3nms_C* 3nsa_C* 3ohx_C* 3t4a_C 2ice_B* 3l3o_B* 3nms_B* ...
Probab=29.64 E-value=1.8e+02 Score=28.34 Aligned_cols=67 Identities=16% Similarity=0.207 Sum_probs=44.1
Q ss_pred ceEEEEEEEEcCccceeeEEEecCCCCCCCceEecC--eeeeeEeeeCCCCceEEEEEEEeceeeeEEeee
Q psy4599 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGG--QFKFVIDRVPPQTNVTHVVIVQPKSYGAFNFSF 70 (201)
Q Consensus 2 d~tV~y~IyNvG~s~A~dV~l~D~~fp~~~F~iv~G--~~~~~~~ri~pg~nvsH~~vv~p~~~G~fn~t~ 70 (201)
.+.+..+|+|..+..+.+|++.=. ..+.|.+.+. .....-=.|+||+..+..+.|+|.+.|..+++-
T Consensus 96 ~~~i~~~v~N~~~~~~~~v~v~l~--~~~~~~~~~~~~~~~~~~v~l~~~~~~~v~f~i~~~~~G~~~i~v 164 (915)
T 2hr0_B 96 QVEIRAVLYNYRQNQELKVRVELL--HNPAFCSLATTKRRHQQTVTIPPKSSLSVPYVIVPLKTGLQEVEV 164 (915)
T ss_dssp CEEEEEEEEECCSSCCEEEEEEEC--CCTTEECSCCSSSCEEEEEEECTTEEEEEEEEEEECSCEEEEEEE
T ss_pred EEEEEEEEEcCCCCeeEEEEEEEe--cCCceEeecCCCCcceeEEEECCCCeEEEEEEEEECccceEEEEE
Confidence 367889999987724455555432 2234655432 111222368999999999999999988877654
No 67
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=29.39 E-value=35 Score=25.73 Aligned_cols=21 Identities=14% Similarity=0.355 Sum_probs=15.3
Q ss_pred EEEEEEEEcCccc----eeeEEEec
Q psy4599 4 VVKYTIYNIGNSV----ATNVVVSD 24 (201)
Q Consensus 4 tV~y~IyNvG~s~----A~dV~l~D 24 (201)
+|++++-|.|.-+ .-++.|.+
T Consensus 28 ~vtv~~~N~g~~p~~~m~H~~vi~~ 52 (129)
T 2ccw_A 28 QFTMHLKHVGKMAKVAMGHNLVLTK 52 (129)
T ss_dssp EEEEEEEECSCCCHHHHCBCCEEEE
T ss_pred EEEEEEEECCCcccccCcceEEEcC
Confidence 4678888998754 57777765
No 68
>3qbt_B Inositol polyphosphate 5-phosphatase OCRL-1; protein transport, vesicular trafficking, GTPase, LOWE syndr immunoglobulin fold, RAB8A, endocytosis; HET: GNP; 2.00A {Homo sapiens}
Probab=29.23 E-value=1.1e+02 Score=22.99 Aligned_cols=51 Identities=16% Similarity=0.084 Sum_probs=31.2
Q ss_pred eEEEEEEEEcCccceeeEEEec----CCCCCCCceEecCeeeeeEeeeCCCCceEEEEEEE
Q psy4599 3 VVVKYTIYNIGNSVATNVVVSD----SSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQ 59 (201)
Q Consensus 3 ~tV~y~IyNvG~s~A~dV~l~D----~~fp~~~F~iv~G~~~~~~~ri~pg~nvsH~~vv~ 59 (201)
.+-+++|.|.|.-+|. .++.. ......-|.+- -.-..|+||+.+.=.+.+.
T Consensus 45 ~~~~l~I~Ntg~vpa~-F~f~~~~~~~~~~~~wl~v~-----P~~G~L~Pge~~~I~v~~~ 99 (140)
T 3qbt_B 45 QKEKFQISNNGQVPCH-FSFIPKLNDSQYCKPWLRAE-----PFEGYLEPNETVDISLDVY 99 (140)
T ss_dssp EEEEEEEEECSSSCEE-EEEECCTTCSSSSCTTEEEE-----SCEEEECTTCEEEEEEEEC
T ss_pred eeeEEEEEcCCccceE-EEEecCCCchhhhhHhhhcC-----CcccccCCCCeeEEEEEEE
Confidence 3567899999998884 33332 11222335442 2345888998877766665
No 69
>2b39_A C3; thioester, immune defense, immune system; HET: NAG BMA; 3.00A {Bos taurus}
Probab=28.49 E-value=2e+02 Score=30.22 Aligned_cols=66 Identities=17% Similarity=0.164 Sum_probs=44.3
Q ss_pred eEEEEEEEEcCccceeeEEEecCCCCCCCceEecCe--eeeeEeeeCCCCceEEEEEEEeceeeeEEeee
Q psy4599 3 VVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQ--FKFVIDRVPPQTNVTHVVIVQPKSYGAFNFSF 70 (201)
Q Consensus 3 ~tV~y~IyNvG~s~A~dV~l~D~~fp~~~F~iv~G~--~~~~~~ri~pg~nvsH~~vv~p~~~G~fn~t~ 70 (201)
+.+..+|+|..+..+.+|++.=. ..+.|.+..+. ....==.|++|+..+..+.|+|.+-|..+++-
T Consensus 844 ~~i~~~V~N~~~~~~~~v~v~l~--~~~~~~~~~~~~~~~~~~v~v~a~~~~~v~f~i~p~~~G~~~i~v 911 (1661)
T 2b39_A 844 VEIRAILYNYREAENLKVRVELL--YNPAFCSLATAKKRHQQTITIPARSSVAVPYVIVPLKIGLHEVEV 911 (1661)
T ss_dssp EEEEEEEEECCTTCCEEEEEEEC--CCTTEECSSCSSCCCEEEEEECTTCEEEEEEEEEECSCEEEEEEE
T ss_pred EEEEEEEEcCCCCccEEEEEEEc--CCCCeEeecCCCCcceEEEEECCCCcEEEEEEEEEcccCeEEEEE
Confidence 67889999987624455555432 22346654431 11222378999999999999999988877654
No 70
>1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1
Probab=28.32 E-value=1.7e+02 Score=21.21 Aligned_cols=46 Identities=11% Similarity=0.073 Sum_probs=23.0
Q ss_pred cceeeEEEecCCCCCCCceEecCeeeeeEeeeCCCCceEEEEEEEece
Q psy4599 15 SVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKS 62 (201)
Q Consensus 15 s~A~dV~l~D~~fp~~~F~iv~G~~~~~~~ri~pg~nvsH~~vv~p~~ 62 (201)
-.-|.|...+.+-......+-....+..+..|.||.. +.|.|++..
T Consensus 34 i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~--Y~~~V~a~~ 79 (186)
T 1qr4_A 34 FDRYRLTYVSPSGKKNEMEIPVDSTSFILRGLDAGTE--YTISLVAEK 79 (186)
T ss_dssp CSEEEEEEECTTCCEEEEEECTTCSEEEEESCCSSCE--EEEEEEEES
T ss_pred ccEEEEEEEeCCCCeeEEECCCCCCEEEECCCCCCCE--EEEEEEEEc
Confidence 3455565554211111222333456777777777764 445555543
No 71
>3qbt_B Inositol polyphosphate 5-phosphatase OCRL-1; protein transport, vesicular trafficking, GTPase, LOWE syndr immunoglobulin fold, RAB8A, endocytosis; HET: GNP; 2.00A {Homo sapiens}
Probab=27.54 E-value=1e+02 Score=23.29 Aligned_cols=52 Identities=17% Similarity=0.173 Sum_probs=29.4
Q ss_pred CceeEEEecccceee-eEEEe--cCCCCCCceEEecCceeeeeeeeCCCCceEEEEEEee
Q psy4599 81 AEDYTIYNIGNSVAT-NVVVS--DSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQP 137 (201)
Q Consensus 81 a~~y~IyNvG~s~A~-dV~l~--D~sfp~~~F~iv~G~~s~~~~rI~pg~nvsH~~vv~p 137 (201)
...++|.|.|..+|. ...-. +....+..|.+- -.=..|+||+.+.=.+.+.-
T Consensus 46 ~~~l~I~Ntg~vpa~F~f~~~~~~~~~~~~wl~v~-----P~~G~L~Pge~~~I~v~~~v 100 (140)
T 3qbt_B 46 KEKFQISNNGQVPCHFSFIPKLNDSQYCKPWLRAE-----PFEGYLEPNETVDISLDVYV 100 (140)
T ss_dssp EEEEEEEECSSSCEEEEEECCTTCSSSSCTTEEEE-----SCEEEECTTCEEEEEEEECB
T ss_pred eeEEEEEcCCccceEEEEecCCCchhhhhHhhhcC-----CcccccCCCCeeEEEEEEEE
Confidence 346677777777663 11111 111223445542 12357999999888888763
No 72
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A*
Probab=27.47 E-value=89 Score=30.07 Aligned_cols=79 Identities=18% Similarity=0.251 Sum_probs=49.6
Q ss_pred eEEeeeEEEEEEeCCCCceeEEEecccceeeeEEEecCCCCCCceEEecCceeeeeeee---CCCCceEEEEEEeeeecc
Q psy4599 65 AFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRV---PPQTNVTHVVIVQPKSYG 141 (201)
Q Consensus 65 ~fn~t~A~VtY~~s~~a~~y~IyNvG~s~A~dV~l~D~sfp~~~F~iv~G~~s~~~~rI---~pg~nvsH~~vv~p~~~G 141 (201)
.|.++...++-....-....++-|+|+-+..+|.-..-+.|...-+--.-+| .-|+|+ +||++.+-+|.|.++...
T Consensus 602 tF~ys~~~~~~~~~~~~v~v~VtNtG~~~G~eVvQlYv~~~~~~~~~P~k~L-~gF~kv~~L~pGes~~V~~~l~~~~l~ 680 (721)
T 2x41_A 602 TFEYSDLNVSFDGETLRVQYRIENTGGRAGKEVSQVYIKAPKGKIDKPFQEL-KAFHKTRLLNPGESEEVVLEIPVRDLA 680 (721)
T ss_dssp CEEEEEEEEEECSSEEEEEEEEEECSSSCBCCEEEEEEECCCSSSCCCSCEE-EEEEECCCBCTTCEEEEEEEEEGGGGC
T ss_pred eeEeeceEeecCCCeEEEEEEEEECCCCCCcEEeeEEEccCCCCCCCchHHh-hcccccccCCCCCeEEEEEEECHHHhc
Confidence 4666666664211112367888999999988886544333422110001112 245555 999999999999999888
Q ss_pred eee
Q psy4599 142 AFN 144 (201)
Q Consensus 142 ~fn 144 (201)
+|+
T Consensus 681 ~~d 683 (721)
T 2x41_A 681 SFN 683 (721)
T ss_dssp EEC
T ss_pred EEc
Confidence 887
No 73
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=26.72 E-value=45 Score=25.10 Aligned_cols=21 Identities=19% Similarity=0.286 Sum_probs=15.6
Q ss_pred EEEEEEEEcCccc----eeeEEEec
Q psy4599 4 VVKYTIYNIGNSV----ATNVVVSD 24 (201)
Q Consensus 4 tV~y~IyNvG~s~----A~dV~l~D 24 (201)
+|++++-|.|.-+ .-++.|.+
T Consensus 28 ~vtv~~~N~g~~p~~~m~H~~vi~~ 52 (128)
T 1nwp_A 28 TFTVELTHSGSLPKNVMGHNLVISK 52 (128)
T ss_dssp EEEEEEEECSSCCHHHHCBCCEEEE
T ss_pred EEEEEEEECCCCcccCCCceEEEcc
Confidence 5678888999765 57777765
No 74
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=25.73 E-value=1.7e+02 Score=20.35 Aligned_cols=64 Identities=16% Similarity=0.037 Sum_probs=36.2
Q ss_pred eeEEeeeEEEEEEeCCCCceeEEEecccceeeeEEEecCCCCCCceEEecCceeeeeeeeCCCCceEEEEEEeeeeccee
Q psy4599 64 GAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAF 143 (201)
Q Consensus 64 G~fn~t~A~VtY~~s~~a~~y~IyNvG~s~A~dV~l~D~sfp~~~F~iv~G~~s~~~~rI~pg~nvsH~~vv~p~~~G~f 143 (201)
..+.|.+..++=+.. +...+.+-|.+.. .-.|.+.... .+. .|+||...+..|. +.+.|.|
T Consensus 31 ~~~~f~p~~i~v~~G-~~V~~~~~n~d~~-------------~H~~~i~~~~--~~~-~i~pG~~~~~~f~--~~~~G~y 91 (112)
T 1iby_A 31 FNVLNEPETLVVKKG-DAVKVVVENKSPI-------------SEGFSIDAFG--VQE-VIKAGETKTISFT--ADKAGAF 91 (112)
T ss_dssp EEEEEESCEEEEETT-CEEEEEEEECSSS-------------CEEEEEGGGT--EEE-EECTTCEEEEEEE--CCSCEEE
T ss_pred EeeEEcCCEEEEeCC-CEEEEEEEECCCC-------------eEEEEEcCCC--cee-EeCCCCEEEEEEE--CCCCEEE
Confidence 345577777766554 3345555665532 1223222222 232 4899988887774 6788877
Q ss_pred eee
Q psy4599 144 NFS 146 (201)
Q Consensus 144 n~t 146 (201)
.+.
T Consensus 92 ~~~ 94 (112)
T 1iby_A 92 TIW 94 (112)
T ss_dssp EEB
T ss_pred EEE
Confidence 543
No 75
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=25.48 E-value=76 Score=23.82 Aligned_cols=11 Identities=9% Similarity=-0.188 Sum_probs=7.1
Q ss_pred eCCCCceEEEE
Q psy4599 46 VPPQTNVTHVV 56 (201)
Q Consensus 46 i~pg~nvsH~~ 56 (201)
+.||+..+|+|
T Consensus 59 ~~pg~t~s~TF 69 (124)
T 3ef4_A 59 GGFSKEVVFNA 69 (124)
T ss_dssp CCTTCCEEEEC
T ss_pred cCCCCEEEEEe
Confidence 35777766666
No 76
>3zyz_A Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.10A {Hypocrea jecorina} PDB: 3zz1_A* 4i8d_A*
Probab=25.45 E-value=1.8e+02 Score=28.05 Aligned_cols=62 Identities=18% Similarity=0.234 Sum_probs=41.6
Q ss_pred eEEEEEEEEcCccceeeEEEecCCCCCCC----ceEecCeeeeeEeeeCCCCceEEEEEEEeceeeeEE
Q psy4599 3 VVVKYTIYNIGNSVATNVVVSDSSFPPEA----FEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAFN 67 (201)
Q Consensus 3 ~tV~y~IyNvG~s~A~dV~l~D~~fp~~~----F~iv~G~~~~~~~ri~pg~nvsH~~vv~p~~~G~fn 67 (201)
++|+.+|-|+|+-+..+|.-.=-+.|... -.-+.|--.+ .|+||++.+-+|.|.+..-.+++
T Consensus 615 ~~vsv~VtNtG~~~G~EVvQlYv~~~~~~~~~P~k~L~gF~kv---~L~pGes~~V~~~l~~~~ls~~d 680 (713)
T 3zyz_A 615 ATVTVDIANSGQVTGAEVAQLYITYPSSAPRTPPKQLRGFAKL---NLTPGQSGTATFNIRRRDLSYWD 680 (713)
T ss_dssp EEEEEEEEECSSSCEEEEEEEEEECCTTSSSCCSCEEEEEEEE---EECTTCEEEEEEEEEGGGGCEEE
T ss_pred EEEEEEEEeCCCCccceeeeeeeecCCCCCCchhHHhhhcccc---eeCCCCeEEEEEEEcHHHeeeee
Confidence 78999999999998887754322223211 1223333333 39999999999999887766665
No 77
>1msp_A MSP, major sperm protein; cytoskeletal protein, cell motility protein; 2.50A {Ascaris suum} SCOP: b.1.11.2 PDB: 3msp_A 2bvu_A 2msp_A 1grw_A
Probab=24.87 E-value=2.1e+02 Score=21.09 Aligned_cols=70 Identities=13% Similarity=0.183 Sum_probs=45.3
Q ss_pred eeeeEEeeeE-EEEEEeC---CCCceeEEEecccc-eeeeEEEecCCCCCCceEEecCceeeeeeeeCCCCceEEEEEEe
Q psy4599 62 SYGAFNFSFA-EVSYKAS---ENAEDYTIYNIGNS-VATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQ 136 (201)
Q Consensus 62 ~~G~fn~t~A-~VtY~~s---~~a~~y~IyNvG~s-~A~dV~l~D~sfp~~~F~iv~G~~s~~~~rI~pg~nvsH~~vv~ 136 (201)
..|...+.|. .+.+..+ +-...+.|.|..+. -|..|+-+.. +.|.+ .-....|+||+++.=.|.+.
T Consensus 5 ~~~~l~i~P~~~l~F~~p~~~~~~~~l~l~N~s~~~vaFKVKTT~p----~~y~V-----rP~~Gii~P~~s~~v~V~~q 75 (126)
T 1msp_A 5 PPGDINTQPSQKIVFNAPYDDKHTYHIKITNAGGRRIGWAIKTTNM----RRLSV-----DPPCGVLDPKEKVLMAVSCD 75 (126)
T ss_dssp CCCCEEEESSSCEEEESCCSSCCCEEEEEEECSSSCEEEEEEESCT----TTEEE-----ESCEEEECTTCEEEEEEEEC
T ss_pred CCCeEEEcCCCeEEEcCcCCcceEEEEEEECCCCCeEEEEEEcCCC----CcEEE-----ECCCeEECCCCEEEEEEEec
Confidence 3444555555 5555554 33456789998775 6777776542 34432 22457899999999999988
Q ss_pred eeec
Q psy4599 137 PKSY 140 (201)
Q Consensus 137 p~~~ 140 (201)
|-+.
T Consensus 76 ~~~~ 79 (126)
T 1msp_A 76 TFNA 79 (126)
T ss_dssp CCCG
T ss_pred CCCC
Confidence 8544
No 78
>2e6j_A Hydin protein; PAPD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.63 E-value=1.8e+02 Score=20.00 Aligned_cols=61 Identities=13% Similarity=0.080 Sum_probs=40.2
Q ss_pred eEEEEEEEEcCccceeeEEEecCCC-CCCCceEecCeeeeeEeeeCCCCceEEEEEEEeceeeeEEee
Q psy4599 3 VVVKYTIYNIGNSVATNVVVSDSSF-PPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAFNFS 69 (201)
Q Consensus 3 ~tV~y~IyNvG~s~A~dV~l~D~~f-p~~~F~iv~G~~~~~~~ri~pg~nvsH~~vv~p~~~G~fn~t 69 (201)
.+-+++|.|.|+.+|. +++..+.= ....|.+ +-.-..|+||+...=.+...|...|.|+-+
T Consensus 28 ~~~~~~l~N~g~~p~~-~~~~~~~~~~~~~f~v-----~p~~g~i~pg~~~~i~V~f~~~~~g~f~~~ 89 (112)
T 2e6j_A 28 HCYEAILYNKGSIDAL-FNMTPPTSALGACFVF-----SPKEGIIEPSGVQAIQISFSSIILGNFEEE 89 (112)
T ss_dssp EEEEEEEEECCSSCEE-EEECCCSSHHHHHCEE-----ESSEEEECTTBCCEEEEEECCCCCEEEEEE
T ss_pred EEEEEEEEECCcceEE-EEEecCCccccCcEEE-----ECCcCEECCCCEEEEEEEEECCCcceEEEE
Confidence 4567888999886543 34332110 0012433 234468999999999999999999998754
No 79
>3ead_A Na/Ca exchange protein; CBD1, calcium regulation, membrane, transmembrane, membrane; 2.25A {Drosophila melanogaster} SCOP: b.1.27.0
Probab=23.49 E-value=2.3e+02 Score=21.02 Aligned_cols=78 Identities=15% Similarity=0.145 Sum_probs=29.3
Q ss_pred eEEeeeEEEEEEeCCCCceeEEEecccceeeeEEEecCCCCC--CceEEecCceeeeeeeeCCCCceEEEEEEe-eeecc
Q psy4599 65 AFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPP--EAFEIQGGQFKFVIDRVPPQTNVTHVVIVQ-PKSYG 141 (201)
Q Consensus 65 ~fn~t~A~VtY~~s~~a~~y~IyNvG~s~A~dV~l~D~sfp~--~~F~iv~G~~s~~~~rI~pg~nvsH~~vv~-p~~~G 141 (201)
-|...+.++++.+.+..+. ..|.+.||..++ |.|.|.-.+... =.+| |.+-+.++.+. ....|
T Consensus 53 Dy~~~~g~l~F~~Get~k~-----------i~V~I~dD~~~E~~E~F~v~L~~p~~-~a~l--g~~~~atvtI~ddD~~g 118 (137)
T 3ead_A 53 DFVGRKGLLSFPPGVDEQR-----------FRIEVIDDDVFEEDECFYIRLFNPSE-GVKL--AVPMIATVMILDDDHAG 118 (137)
T ss_dssp TBCCCEEEEEECTTCCEEE-----------EEEEBCCCSSCCCCEEEEEEEECCCT-TCEE--CSCSEEEEEEECCC---
T ss_pred cEeEeeEEEEECCCceEEE-----------EEEEEecCCcccCcEEEEEEEECCCC-CcEE--CCCcEEEEEEECCCCCC
Confidence 3444455666666555443 346777766554 467666544200 0112 22334445544 55568
Q ss_pred eeeeeeeEEEEecCCCC
Q psy4599 142 AFNFSFAEVSYKASENA 158 (201)
Q Consensus 142 ~fn~t~A~v~yr~s~~a 158 (201)
.|.|..+ .|...|++
T Consensus 119 ~~~f~~~--~~~V~E~~ 133 (137)
T 3ead_A 119 IFAFTDS--VFEITESV 133 (137)
T ss_dssp -----------------
T ss_pred EEEECCC--cEEEeccc
Confidence 8888887 67776643
No 80
>4djm_A DRAB; chaperone, PILI; 2.52A {Escherichia coli}
Probab=21.96 E-value=2.9e+02 Score=22.82 Aligned_cols=71 Identities=15% Similarity=0.166 Sum_probs=43.9
Q ss_pred EEeceeeeEEeeeEEEEEEeCCCCceeEEEecccceeeeEE--EecC-CCCCCceEEecCceeeeeeeeCCCCceEEEEE
Q psy4599 58 VQPKSYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVV--VSDS-SFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVI 134 (201)
Q Consensus 58 v~p~~~G~fn~t~A~VtY~~s~~a~~y~IyNvG~s~A~dV~--l~D~-sfp~~~F~iv~G~~s~~~~rI~pg~nvsH~~v 134 (201)
-......-+......|-|-..+.+..+.|.|.|+.+.+ |+ +.|. .-....|.+.-- ..||+||..-+=-++
T Consensus 16 ~~~~~aa~v~l~~TRvIy~~~~k~~sl~l~N~~~~P~L-vQsWv~~~~~~~~~pfivtPP-----lfRlep~~~q~lRIi 89 (239)
T 4djm_A 16 ETNARVFSLHLGATRVVYNPASSGETLTVINDQDYPML-VQSEVLSEDQKSPAPFVVTPP-----LFRLDGQQSSRLRIV 89 (239)
T ss_dssp ----CEECCEESCSEEEECTTSSCEEEEEEECSSSCEE-EEEEEECTTSSSBCSEEEESS-----EEEECTTEEEEEEEE
T ss_pred cccceEEeEEEcceEEEEeCCCCEEEEEEEeCCCCcEE-EEEEEEcCCCCccCCEEEcCC-----eEEECCCCceEEEEE
Confidence 33455566788999999999999999999999987644 44 3331 111223544333 347777765554444
No 81
>3gfu_C Chaperone protein FAEE; immunoglobulin like fold, chaperone, fimbrium, immunoglobulin domain, periplasm, plasmid, cell adhesion; 1.99A {Escherichia coli} PDB: 3gew_B 3f65_A 3f6i_A 3f6l_A
Probab=21.03 E-value=3.2e+02 Score=22.49 Aligned_cols=64 Identities=14% Similarity=0.137 Sum_probs=40.6
Q ss_pred EEeeeEEEEEEeCCCCceeEEEecccceeeeE--EEecC--CCCCCceEEecCceeeeeeeeCCCCceEEEEE
Q psy4599 66 FNFSFAEVSYKASENAEDYTIYNIGNSVATNV--VVSDS--SFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVI 134 (201)
Q Consensus 66 fn~t~A~VtY~~s~~a~~y~IyNvG~s~A~dV--~l~D~--sfp~~~F~iv~G~~s~~~~rI~pg~nvsH~~v 134 (201)
|......|-|-..+.+..+.|.|.|+...+-| -+.|. .-....|.+.-- ..||+||..-+=-++
T Consensus 2 ~~l~~TRvIy~~~~k~~sl~l~N~~~~~p~LvQsWid~~~~~~~~~pfivtPP-----lfRlep~~~q~lRIi 69 (224)
T 3gfu_C 2 LAVDQTRYIFRGDKDALTITVTNNDKERTFGGQAWVDNIVEKDTRPTFVVTPS-----FFKVKPNGQQTLRII 69 (224)
T ss_dssp EECSCSEEEEETTSSCEEEEEEECCSSCCEEEEEEEEESSCCSCSCSEEEESS-----EEEECTTCEEEEEEE
T ss_pred ccccceEEEEeCCCceEEEEEEeCCCCccEEEEEEEecCCCCcccCCEEEcCC-----eEEECCCCceEEEEE
Confidence 55677889999999999999999998744433 34431 111223644333 347777766554444
No 82
>1ex0_A Coagulation factor XIII A chain; transglutaminase, blood coagulation, mutant, W279F, oxyanion, transferase; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1evu_A 1fie_A 1f13_A 1ggt_A 1ggu_A 1ggy_A 1qrk_A
Probab=20.77 E-value=6e+02 Score=24.86 Aligned_cols=59 Identities=12% Similarity=0.218 Sum_probs=40.1
Q ss_pred ecccceeeeEEEecCCCCCC----ceE-----EecCceeeeeeeeCCCCceEEEEEEeeeecceeeeeee
Q psy4599 88 NIGNSVATNVVVSDSSFPPE----AFE-----IQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAFNFSFA 148 (201)
Q Consensus 88 NvG~s~A~dV~l~D~sfp~~----~F~-----iv~G~~s~~~~rI~pg~nvsH~~vv~p~~~G~fn~t~A 148 (201)
.+|..-...|+++ +-.|.. .|. +..+ .......|+||..+++.+.+.|++.|.-.+...
T Consensus 641 ~v~~~l~v~vsf~-NPL~~~L~~c~~~vEG~GL~~~-~~~~~~~v~pg~~~~~~~~~~P~~~G~r~L~a~ 708 (731)
T 1ex0_A 641 VVGSDMTVTVQFT-NPLKETLRNVWVHLDGPGVTRP-MKKMFREIRPNSTVQWEEVCRPWVSGHRKLIAS 708 (731)
T ss_dssp BTTSCEEEEEEEE-CCSSSCEEEEEEEEEETTTEEE-EEEEEEEECTTCEEEEEEEECCSSCEEEEEEEE
T ss_pred ccCCeEEEEEEEE-CCCCCcccceEEEEECCCCCce-eeEecCccCCCCEEEEEEEEEeccccceEEEEE
Confidence 3455555555555 334442 232 2223 667888999999999999999999998776443
No 83
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=20.67 E-value=1.2e+02 Score=21.87 Aligned_cols=46 Identities=11% Similarity=0.114 Sum_probs=31.7
Q ss_pred eeeeEEEec-CCCCCCceEEecCceeeeeeeeCCCCceEEEEEEeeeecc
Q psy4599 93 VATNVVVSD-SSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYG 141 (201)
Q Consensus 93 ~A~dV~l~D-~sfp~~~F~iv~G~~s~~~~rI~pg~nvsH~~vv~p~~~G 141 (201)
..+.|++-| +.+..+.|. |...+..+.|.++....+-+.|.|..+|
T Consensus 88 ~~L~~~V~d~d~~~~~~~l---G~~~i~l~~l~~~~~~~~W~~L~~~~~g 134 (134)
T 2b3r_A 88 RELQLSVLSAESLRENFFL---GGITLPLKDFNLSKETVKWYQLTAATYL 134 (134)
T ss_dssp CEEEEEEEECCSSSCCEEE---EEEEEEGGGSCTTSCEEEEEECBC----
T ss_pred CEEEEEEEECCCCCCCcEE---EEEEEEhhhccCCCCcceeEECCCccCC
Confidence 345677777 555556664 8888999999998888888888776654
Done!