Your job contains 1 sequence.
>psy4599
MDVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQP
KSYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVI
DRVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLIPFLL
WFQSKTKYEKLAGGKTKKSKD
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy4599
(201 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0011016 - symbol:SsRbeta "Signal sequence receptor... 254 3.7e-29 2
ZFIN|ZDB-GENE-010413-1 - symbol:ssr2 "signal sequence rec... 196 3.2e-21 2
UNIPROTKB|Q5ZLW9 - symbol:SSR2 "Uncharacterized protein" ... 192 4.1e-21 2
UNIPROTKB|Q5E9E4 - symbol:SSR2 "Translocon-associated pro... 192 4.1e-21 2
UNIPROTKB|P43308 - symbol:SSR2 "Translocon-associated pro... 191 5.2e-21 2
UNIPROTKB|F1RLP7 - symbol:SSR2 "Uncharacterized protein" ... 191 5.2e-21 2
UNIPROTKB|F1MW25 - symbol:SSR2 "Translocon-associated pro... 192 1.1e-20 2
UNIPROTKB|P23438 - symbol:SSR2 "Translocon-associated pro... 192 1.1e-20 2
MGI|MGI:1913506 - symbol:Ssr2 "signal sequence receptor, ... 191 1.7e-20 2
RGD|1308365 - symbol:Ssr2 "signal sequence receptor, beta... 191 1.7e-20 2
UNIPROTKB|F1PBG4 - symbol:SSR2 "Translocon-associated pro... 181 1.5e-19 2
UNIPROTKB|E9PJ35 - symbol:SSR2 "Translocon-associated pro... 191 4.2e-15 1
UNIPROTKB|E9PQI4 - symbol:SSR2 "Translocon-associated pro... 191 4.2e-15 1
WB|WBGene00020216 - symbol:trap-2 species:6239 "Caenorhab... 169 9.1e-13 1
UNIPROTKB|E9PN13 - symbol:SSR2 "Translocon-associated pro... 120 1.4e-07 1
UNIPROTKB|E9PLP2 - symbol:SSR2 "Translocon-associated pro... 117 2.9e-07 1
UNIPROTKB|E9PQ05 - symbol:SSR2 "Translocon-associated pro... 117 2.9e-07 1
WB|WBGene00010678 - symbol:K08F4.3 species:6239 "Caenorha... 108 0.00012 1
>FB|FBgn0011016 [details] [associations]
symbol:SsRbeta "Signal sequence receptor beta" species:7227
"Drosophila melanogaster" [GO:0005786 "signal recognition particle,
endoplasmic reticulum targeting" evidence=ISS] [GO:0005048 "signal
sequence binding" evidence=ISS] [GO:0006621 "protein retention in
ER lumen" evidence=ISS] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005811 "lipid particle" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] InterPro:IPR008856 Pfam:PF05753
PIRSF:PIRSF016400 GO:GO:0005783 GO:GO:0016021 GO:GO:0005875
EMBL:AE014296 GO:GO:0005811 GO:GO:0006621 GO:GO:0005048
GO:GO:0005786 eggNOG:NOG292722 KO:K13250 PANTHER:PTHR12861
GeneTree:ENSGT00390000005125 OMA:VVIGFTS EMBL:AF160923
RefSeq:NP_524103.2 UniGene:Dm.3086 IntAct:Q9VUZ0 MINT:MINT-959225
STRING:Q9VUZ0 EnsemblMetazoa:FBtr0075453 GeneID:39768
KEGG:dme:Dmel_CG5474 UCSC:CG5474-RA CTD:39768 FlyBase:FBgn0011016
InParanoid:Q9VUZ0 OrthoDB:EOG4RBP1R GenomeRNAi:39768 NextBio:815282
Uniprot:Q9VUZ0
Length = 190
Score = 254 (94.5 bits), Expect = 3.7e-29, Sum P(2) = 3.7e-29
Identities = 46/81 (56%), Positives = 64/81 (79%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 61
D++V+YTI+N+G+ AT V + DS F PEAF++ GGQ V+DR+ PQTN THV++V+PK
Sbjct: 44 DLLVRYTIFNVGSGAATKVRLVDSGFHPEAFDVVGGQPTAVVDRIAPQTNFTHVLVVRPK 103
Query: 62 SYGAFNFSFAEVSYKASENAE 82
++G FNF+ AEVSYKA E +E
Sbjct: 104 AFGYFNFTAAEVSYKAVEESE 124
Score = 240 (89.5 bits), Expect = 1.1e-27, Sum P(2) = 1.1e-27
Identities = 44/76 (57%), Positives = 59/76 (77%)
Query: 84 YTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAF 143
YTI+N+G+ AT V + DS F PEAF++ GGQ V+DR+ PQTN THV++V+PK++G F
Sbjct: 49 YTIFNVGSGAATKVRLVDSGFHPEAFDVVGGQPTAVVDRIAPQTNFTHVLVVRPKAFGYF 108
Query: 144 NFSFAEVSYKASENAE 159
NF+ AEVSYKA E +E
Sbjct: 109 NFTAAEVSYKAVEESE 124
Score = 85 (35.0 bits), Expect = 3.7e-29, Sum P(2) = 3.7e-29
Identities = 18/37 (48%), Positives = 20/37 (54%)
Query: 162 DWAAFAFMTXXXXXXXXXXWFQSKTKYEKLAGGKTKK 198
DW AFA MT W QSK+KYE+ GK KK
Sbjct: 155 DWVAFAVMTLPSLAIPLALWHQSKSKYER--SGKNKK 189
>ZFIN|ZDB-GENE-010413-1 [details] [associations]
symbol:ssr2 "signal sequence receptor, beta"
species:7955 "Danio rerio" [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR008856 Pfam:PF05753 PIRSF:PIRSF016400
ZFIN:ZDB-GENE-010413-1 GO:GO:0005783 GO:GO:0016021
PANTHER:PTHR12861 GeneTree:ENSGT00390000005125 EMBL:FP074861
IPI:IPI01024355 Ensembl:ENSDART00000149169 ArrayExpress:F8W477
Bgee:F8W477 Uniprot:F8W477
Length = 186
Score = 196 (74.1 bits), Expect = 3.2e-21, Sum P(2) = 3.2e-21
Identities = 37/81 (45%), Positives = 51/81 (62%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 61
D+ ++Y+IYN+G S A V +SD SFPPE F I G DR+ P +NV+H V+++P
Sbjct: 42 DLTLQYSIYNVGTSAALEVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPL 101
Query: 62 SYGAFNFSFAEVSYKASENAE 82
G FNF+ A VSY A E +
Sbjct: 102 KAGYFNFTSASVSYLAQEGGQ 122
Score = 187 (70.9 bits), Expect = 2.8e-20, Sum P(2) = 2.8e-20
Identities = 36/76 (47%), Positives = 47/76 (61%)
Query: 84 YTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAF 143
Y+IYN+G S A V +SD SFPPE F I G DR+ P +NV+H V+++P G F
Sbjct: 47 YSIYNVGTSAALEVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYF 106
Query: 144 NFSFAEVSYKASENAE 159
NF+ A VSY A E +
Sbjct: 107 NFTSASVSYLAQEGGQ 122
Score = 67 (28.6 bits), Expect = 3.2e-21, Sum P(2) = 3.2e-21
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 162 DWAAFAFMTXXXXXXXXXXWFQSKTKYEKLAGGKTKKS 199
DWAAF MT W+ SK KY+ K+KK+
Sbjct: 152 DWAAFGVMTLPSIGIPLLLWYSSKRKYDS---PKSKKN 186
>UNIPROTKB|Q5ZLW9 [details] [associations]
symbol:SSR2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR008856
Pfam:PF05753 PIRSF:PIRSF016400 GO:GO:0005783 GO:GO:0016021 CTD:6746
HOVERGEN:HBG000858 KO:K13250 PANTHER:PTHR12861
GeneTree:ENSGT00390000005125 OMA:VVIGFTS EMBL:AADN02010496
EMBL:AJ719615 IPI:IPI00580738 RefSeq:NP_001006561.1
UniGene:Gga.7437 STRING:Q5ZLW9 Ensembl:ENSGALT00000001109
GeneID:425656 KEGG:gga:425656 InParanoid:Q5ZLW9 NextBio:20827586
Uniprot:Q5ZLW9
Length = 183
Score = 192 (72.6 bits), Expect = 4.1e-21, Sum P(2) = 4.1e-21
Identities = 35/81 (43%), Positives = 52/81 (64%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 61
D+ ++Y IYN+G+S A +V +SD SFPPE F I G DR+ P +NV+H V+++P
Sbjct: 39 DLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPL 98
Query: 62 SYGAFNFSFAEVSYKASENAE 82
G FNF+ A ++Y A E +
Sbjct: 99 KAGYFNFTSATITYLAQEGGQ 119
Score = 183 (69.5 bits), Expect = 3.6e-20, Sum P(2) = 3.6e-20
Identities = 34/76 (44%), Positives = 48/76 (63%)
Query: 84 YTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAF 143
Y IYN+G+S A +V +SD SFPPE F I G DR+ P +NV+H V+++P G F
Sbjct: 44 YNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYF 103
Query: 144 NFSFAEVSYKASENAE 159
NF+ A ++Y A E +
Sbjct: 104 NFTSATITYLAQEGGQ 119
Score = 70 (29.7 bits), Expect = 4.1e-21, Sum P(2) = 4.1e-21
Identities = 16/38 (42%), Positives = 19/38 (50%)
Query: 162 DWAAFAFMTXXXXXXXXXXWFQSKTKYEKLAGGKTKKS 199
DWAAF MT W+ SK KY+ KTKK+
Sbjct: 149 DWAAFGVMTLPSIGIPLLLWYSSKRKYDT---PKTKKN 183
>UNIPROTKB|Q5E9E4 [details] [associations]
symbol:SSR2 "Translocon-associated protein subunit beta"
species:9913 "Bos taurus" [GO:0005789 "endoplasmic reticulum
membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR008856 Pfam:PF05753 PIRSF:PIRSF016400
GO:GO:0016021 GO:GO:0005789 EMBL:BT020976 EMBL:BC102097
IPI:IPI00696616 RefSeq:NP_001015533.1 UniGene:Bt.49010
STRING:Q5E9E4 GeneID:506530 KEGG:bta:506530 CTD:6746
eggNOG:NOG292722 HOGENOM:HOG000007980 HOVERGEN:HBG000858 KO:K13250
OrthoDB:EOG4RFKTN NextBio:20867643 PANTHER:PTHR12861 Uniprot:Q5E9E4
Length = 183
Score = 192 (72.6 bits), Expect = 4.1e-21, Sum P(2) = 4.1e-21
Identities = 36/79 (45%), Positives = 52/79 (65%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 61
D+ ++Y IYN+G+S A +V +SD SFPPE F I G DR+ P +NV+H V+++P
Sbjct: 39 DLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPL 98
Query: 62 SYGAFNFSFAEVSYKASEN 80
G FNF+ A V+Y A E+
Sbjct: 99 KAGYFNFTSATVTYLAQED 117
Score = 183 (69.5 bits), Expect = 3.6e-20, Sum P(2) = 3.6e-20
Identities = 35/74 (47%), Positives = 48/74 (64%)
Query: 84 YTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAF 143
Y IYN+G+S A +V +SD SFPPE F I G DR+ P +NV+H V+++P G F
Sbjct: 44 YNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYF 103
Query: 144 NFSFAEVSYKASEN 157
NF+ A V+Y A E+
Sbjct: 104 NFTSATVTYLAQED 117
Score = 70 (29.7 bits), Expect = 4.1e-21, Sum P(2) = 4.1e-21
Identities = 16/38 (42%), Positives = 19/38 (50%)
Query: 162 DWAAFAFMTXXXXXXXXXXWFQSKTKYEKLAGGKTKKS 199
DWAAF MT W+ SK KY+ KTKK+
Sbjct: 149 DWAAFGVMTLPSIGVPLLLWYSSKRKYDT---PKTKKN 183
>UNIPROTKB|P43308 [details] [associations]
symbol:SSR2 "Translocon-associated protein subunit beta"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=TAS]
[GO:0006613 "cotranslational protein targeting to membrane"
evidence=TAS] [GO:0006412 "translation" evidence=TAS] [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0044267 "cellular protein metabolic process" evidence=TAS]
Reactome:REACT_71 Reactome:REACT_17015 InterPro:IPR008856
Pfam:PF05753 PIRSF:PIRSF016400 GO:GO:0005783 GO:GO:0016021
GO:GO:0005789 GO:GO:0006412 EMBL:CH471121 EMBL:AL355388
GO:GO:0006614 CTD:6746 eggNOG:NOG292722 HOVERGEN:HBG000858
KO:K13250 OrthoDB:EOG4RFKTN PANTHER:PTHR12861 OMA:VVIGFTS
EMBL:X74104 EMBL:D37991 EMBL:AY251536 EMBL:CR456973 EMBL:AK222600
EMBL:AK313821 EMBL:BC000341 IPI:IPI00425902 PIR:S41063
RefSeq:NP_003136.1 UniGene:Hs.74564 ProteinModelPortal:P43308
IntAct:P43308 STRING:P43308 PhosphoSite:P43308 DMDM:1174451
PaxDb:P43308 PRIDE:P43308 Ensembl:ENST00000295702
Ensembl:ENST00000480567 GeneID:6746 KEGG:hsa:6746 UCSC:uc001fmx.3
GeneCards:GC01M155983 HGNC:HGNC:11324 HPA:HPA037787 MIM:600867
neXtProt:NX_P43308 PharmGKB:PA36148 InParanoid:P43308
PhylomeDB:P43308 ChiTaRS:SSR2 GenomeRNAi:6746 NextBio:26314
ArrayExpress:P43308 Bgee:P43308 CleanEx:HS_SSR2
Genevestigator:P43308 GermOnline:ENSG00000163479 Uniprot:P43308
Length = 183
Score = 191 (72.3 bits), Expect = 5.2e-21, Sum P(2) = 5.2e-21
Identities = 35/79 (44%), Positives = 52/79 (65%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 61
D+ ++Y IYN+G+S A +V +SD SFPPE F I G DR+ P +NV+H V+++P
Sbjct: 39 DLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPL 98
Query: 62 SYGAFNFSFAEVSYKASEN 80
G FNF+ A ++Y A E+
Sbjct: 99 KAGYFNFTSATITYLAQED 117
Score = 182 (69.1 bits), Expect = 4.5e-20, Sum P(2) = 4.5e-20
Identities = 34/74 (45%), Positives = 48/74 (64%)
Query: 84 YTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAF 143
Y IYN+G+S A +V +SD SFPPE F I G DR+ P +NV+H V+++P G F
Sbjct: 44 YNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYF 103
Query: 144 NFSFAEVSYKASEN 157
NF+ A ++Y A E+
Sbjct: 104 NFTSATITYLAQED 117
Score = 70 (29.7 bits), Expect = 5.2e-21, Sum P(2) = 5.2e-21
Identities = 16/38 (42%), Positives = 19/38 (50%)
Query: 162 DWAAFAFMTXXXXXXXXXXWFQSKTKYEKLAGGKTKKS 199
DWAAF MT W+ SK KY+ KTKK+
Sbjct: 149 DWAAFGVMTLPSIGIPLLLWYSSKRKYDT---PKTKKN 183
>UNIPROTKB|F1RLP7 [details] [associations]
symbol:SSR2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR008856 Pfam:PF05753 PIRSF:PIRSF016400 GO:GO:0005783
GO:GO:0016021 PANTHER:PTHR12861 GeneTree:ENSGT00390000005125
OMA:VVIGFTS EMBL:CU151868 Ensembl:ENSSSCT00000007120 Uniprot:F1RLP7
Length = 203
Score = 191 (72.3 bits), Expect = 5.2e-21, Sum P(2) = 5.2e-21
Identities = 35/79 (44%), Positives = 52/79 (65%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 61
D+ ++Y IYN+G+S A +V +SD SFPPE F I G DR+ P +NV+H V+++P
Sbjct: 59 DLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPL 118
Query: 62 SYGAFNFSFAEVSYKASEN 80
G FNF+ A ++Y A E+
Sbjct: 119 KAGYFNFTSATITYLAQED 137
Score = 182 (69.1 bits), Expect = 4.5e-20, Sum P(2) = 4.5e-20
Identities = 34/74 (45%), Positives = 48/74 (64%)
Query: 84 YTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAF 143
Y IYN+G+S A +V +SD SFPPE F I G DR+ P +NV+H V+++P G F
Sbjct: 64 YNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYF 123
Query: 144 NFSFAEVSYKASEN 157
NF+ A ++Y A E+
Sbjct: 124 NFTSATITYLAQED 137
Score = 70 (29.7 bits), Expect = 5.2e-21, Sum P(2) = 5.2e-21
Identities = 16/38 (42%), Positives = 19/38 (50%)
Query: 162 DWAAFAFMTXXXXXXXXXXWFQSKTKYEKLAGGKTKKS 199
DWAAF MT W+ SK KY+ KTKK+
Sbjct: 169 DWAAFGVMTLPSIGIPLLLWYSSKRKYDT---PKTKKN 203
>UNIPROTKB|F1MW25 [details] [associations]
symbol:SSR2 "Translocon-associated protein subunit beta"
species:9913 "Bos taurus" [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR008856 Pfam:PF05753 PIRSF:PIRSF016400 GO:GO:0005783
GO:GO:0016021 PANTHER:PTHR12861 GeneTree:ENSGT00390000005125
OMA:VVIGFTS EMBL:DAAA02007147 IPI:IPI00838676
Ensembl:ENSBTAT00000047947 Uniprot:F1MW25
Length = 212
Score = 192 (72.6 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 36/79 (45%), Positives = 52/79 (65%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 61
D+ ++Y IYN+G+S A +V +SD SFPPE F I G DR+ P +NV+H V+++P
Sbjct: 39 DLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPL 98
Query: 62 SYGAFNFSFAEVSYKASEN 80
G FNF+ A V+Y A E+
Sbjct: 99 KAGYFNFTSATVTYLAQED 117
Score = 183 (69.5 bits), Expect = 9.3e-20, Sum P(2) = 9.3e-20
Identities = 35/74 (47%), Positives = 48/74 (64%)
Query: 84 YTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAF 143
Y IYN+G+S A +V +SD SFPPE F I G DR+ P +NV+H V+++P G F
Sbjct: 44 YNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYF 103
Query: 144 NFSFAEVSYKASEN 157
NF+ A V+Y A E+
Sbjct: 104 NFTSATVTYLAQED 117
Score = 66 (28.3 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 15/40 (37%), Positives = 19/40 (47%)
Query: 162 DWAAFAFMTXXXXXXXXXXWFQSKTKYE-----KLAGGKT 196
DWAAF MT W+ SK KY+ +L+G T
Sbjct: 149 DWAAFGVMTLPSIGVPLLLWYSSKRKYDTPKTKRLSGAST 188
>UNIPROTKB|P23438 [details] [associations]
symbol:SSR2 "Translocon-associated protein subunit beta"
species:9615 "Canis lupus familiaris" [GO:0005789 "endoplasmic
reticulum membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR008856 Pfam:PF05753
PIRSF:PIRSF016400 GO:GO:0016021 GO:GO:0005789 CTD:6746
eggNOG:NOG292722 HOGENOM:HOG000007980 HOVERGEN:HBG000858 KO:K13250
OrthoDB:EOG4RFKTN PANTHER:PTHR12861 EMBL:X53529 EMBL:X53591
PIR:A36679 RefSeq:NP_001003269.1 UniGene:Cfa.2734 STRING:P23438
GeneID:403950 KEGG:cfa:403950 InParanoid:P23438 NextBio:20817440
Uniprot:P23438
Length = 183
Score = 192 (72.6 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 36/79 (45%), Positives = 52/79 (65%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 61
D+ ++Y IYN+G+S A +V +SD SFPPE F I G DR+ P +NV+H V+++P
Sbjct: 39 DLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPL 98
Query: 62 SYGAFNFSFAEVSYKASEN 80
G FNF+ A V+Y A E+
Sbjct: 99 KAGYFNFTSATVTYLAQED 117
Score = 183 (69.5 bits), Expect = 9.3e-20, Sum P(2) = 9.3e-20
Identities = 35/74 (47%), Positives = 48/74 (64%)
Query: 84 YTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAF 143
Y IYN+G+S A +V +SD SFPPE F I G DR+ P +NV+H V+++P G F
Sbjct: 44 YNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYF 103
Query: 144 NFSFAEVSYKASEN 157
NF+ A V+Y A E+
Sbjct: 104 NFTSATVTYLAQED 117
Score = 66 (28.3 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 162 DWAAFAFMTXXXXXXXXXXWFQSKTKYEKLAGGKTKKS 199
DWAAF MT W+ SK KY+ K+KK+
Sbjct: 149 DWAAFGVMTLPSIGIPLLLWYSSKRKYDT---PKSKKN 183
>MGI|MGI:1913506 [details] [associations]
symbol:Ssr2 "signal sequence receptor, beta" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR008856 Pfam:PF05753 PIRSF:PIRSF016400 MGI:MGI:1913506
GO:GO:0016021 GO:GO:0005789 CTD:6746 eggNOG:NOG292722
HOGENOM:HOG000007980 HOVERGEN:HBG000858 KO:K13250 OrthoDB:EOG4RFKTN
PANTHER:PTHR12861 GeneTree:ENSGT00390000005125 OMA:VVIGFTS
EMBL:AK005340 EMBL:AK007538 EMBL:AK007720 EMBL:AK010565
EMBL:AK020145 EMBL:AK050505 EMBL:AK084530 EMBL:BC010214
IPI:IPI00467180 RefSeq:NP_079724.1 UniGene:Mm.7091
ProteinModelPortal:Q9CPW5 STRING:Q9CPW5 PhosphoSite:Q9CPW5
PaxDb:Q9CPW5 PRIDE:Q9CPW5 Ensembl:ENSMUST00000035785 GeneID:66256
KEGG:mmu:66256 UCSC:uc008pvs.1 InParanoid:Q9CPW5 NextBio:321109
Bgee:Q9CPW5 CleanEx:MM_SSR2 Genevestigator:Q9CPW5
GermOnline:ENSMUSG00000041355 Uniprot:Q9CPW5
Length = 183
Score = 191 (72.3 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
Identities = 35/79 (44%), Positives = 52/79 (65%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 61
D+ ++Y IYN+G+S A +V +SD SFPPE F I G DR+ P +NV+H V+++P
Sbjct: 39 DLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPL 98
Query: 62 SYGAFNFSFAEVSYKASEN 80
G FNF+ A ++Y A E+
Sbjct: 99 KAGYFNFTSATITYLAQED 117
Score = 182 (69.1 bits), Expect = 1.5e-19, Sum P(2) = 1.5e-19
Identities = 34/74 (45%), Positives = 48/74 (64%)
Query: 84 YTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAF 143
Y IYN+G+S A +V +SD SFPPE F I G DR+ P +NV+H V+++P G F
Sbjct: 44 YNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYF 103
Query: 144 NFSFAEVSYKASEN 157
NF+ A ++Y A E+
Sbjct: 104 NFTSATITYLAQED 117
Score = 65 (27.9 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
Identities = 12/28 (42%), Positives = 14/28 (50%)
Query: 162 DWAAFAFMTXXXXXXXXXXWFQSKTKYE 189
DWAAF MT W+ SK KY+
Sbjct: 149 DWAAFGVMTLPSIGIPLLLWYSSKRKYD 176
>RGD|1308365 [details] [associations]
symbol:Ssr2 "signal sequence receptor, beta" species:10116
"Rattus norvegicus" [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR008856 Pfam:PF05753 PIRSF:PIRSF016400 RGD:1308365
GO:GO:0005783 GO:GO:0016021 EMBL:CH473976 CTD:6746 eggNOG:NOG292722
HOGENOM:HOG000007980 HOVERGEN:HBG000858 KO:K13250 OrthoDB:EOG4RFKTN
PANTHER:PTHR12861 GeneTree:ENSGT00390000005125 OMA:VVIGFTS
EMBL:BC168754 IPI:IPI00198865 RefSeq:NP_001099912.1
UniGene:Rn.17458 STRING:B5DEQ0 Ensembl:ENSRNOT00000027123
GeneID:295235 KEGG:rno:295235 UCSC:RGD:1308365 NextBio:639162
Genevestigator:B5DEQ0 Uniprot:B5DEQ0
Length = 183
Score = 191 (72.3 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
Identities = 35/79 (44%), Positives = 52/79 (65%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 61
D+ ++Y IYN+G+S A +V +SD SFPPE F I G DR+ P +NV+H V+++P
Sbjct: 39 DLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPL 98
Query: 62 SYGAFNFSFAEVSYKASEN 80
G FNF+ A ++Y A E+
Sbjct: 99 KAGYFNFTSATITYLAQED 117
Score = 182 (69.1 bits), Expect = 1.5e-19, Sum P(2) = 1.5e-19
Identities = 34/74 (45%), Positives = 48/74 (64%)
Query: 84 YTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAF 143
Y IYN+G+S A +V +SD SFPPE F I G DR+ P +NV+H V+++P G F
Sbjct: 44 YNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYF 103
Query: 144 NFSFAEVSYKASEN 157
NF+ A ++Y A E+
Sbjct: 104 NFTSATITYLAQED 117
Score = 65 (27.9 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
Identities = 12/28 (42%), Positives = 14/28 (50%)
Query: 162 DWAAFAFMTXXXXXXXXXXWFQSKTKYE 189
DWAAF MT W+ SK KY+
Sbjct: 149 DWAAFGVMTLPSIGIPLLLWYSSKRKYD 176
>UNIPROTKB|F1PBG4 [details] [associations]
symbol:SSR2 "Translocon-associated protein subunit beta"
species:9615 "Canis lupus familiaris" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] InterPro:IPR008856 Pfam:PF05753 PIRSF:PIRSF016400
GO:GO:0005783 GO:GO:0016021 PANTHER:PTHR12861
GeneTree:ENSGT00390000005125 OMA:VVIGFTS EMBL:AAEX03005330
Ensembl:ENSCAFT00000026734 Uniprot:F1PBG4
Length = 185
Score = 181 (68.8 bits), Expect = 1.5e-19, Sum P(2) = 1.5e-19
Identities = 36/81 (44%), Positives = 52/81 (64%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPP--QTNVTHVVIVQ 59
D+ ++Y IYN+G+S A +V +SD SFPPE F I G DR+ P +NV+H V+++
Sbjct: 39 DLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPVSASNVSHTVVLR 98
Query: 60 PKSYGAFNFSFAEVSYKASEN 80
P G FNF+ A V+Y A E+
Sbjct: 99 PLKAGYFNFTSATVTYLAQED 119
Score = 172 (65.6 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
Identities = 35/76 (46%), Positives = 48/76 (63%)
Query: 84 YTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPP--QTNVTHVVIVQPKSYG 141
Y IYN+G+S A +V +SD SFPPE F I G DR+ P +NV+H V+++P G
Sbjct: 44 YNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPVSASNVSHTVVLRPLKAG 103
Query: 142 AFNFSFAEVSYKASEN 157
FNF+ A V+Y A E+
Sbjct: 104 YFNFTSATVTYLAQED 119
Score = 66 (28.3 bits), Expect = 1.5e-19, Sum P(2) = 1.5e-19
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 162 DWAAFAFMTXXXXXXXXXXWFQSKTKYEKLAGGKTKKS 199
DWAAF MT W+ SK KY+ K+KK+
Sbjct: 151 DWAAFGVMTLPSIGIPLLLWYSSKRKYDT---PKSKKN 185
>UNIPROTKB|E9PJ35 [details] [associations]
symbol:SSR2 "Translocon-associated protein subunit beta"
species:9606 "Homo sapiens" [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR008856 Pfam:PF05753 GO:GO:0005783 GO:GO:0016021
EMBL:AL355388 PANTHER:PTHR12861 HGNC:HGNC:11324 ChiTaRS:SSR2
IPI:IPI00976812 Ensembl:ENST00000466905 Ensembl:ENST00000474377
Uniprot:E9PJ35
Length = 133
Score = 191 (72.3 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 35/79 (44%), Positives = 52/79 (65%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 61
D+ ++Y IYN+G+S A +V +SD SFPPE F I G DR+ P +NV+H V+++P
Sbjct: 39 DLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPL 98
Query: 62 SYGAFNFSFAEVSYKASEN 80
G FNF+ A ++Y A E+
Sbjct: 99 KAGYFNFTSATITYLAQED 117
Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 34/74 (45%), Positives = 48/74 (64%)
Query: 84 YTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAF 143
Y IYN+G+S A +V +SD SFPPE F I G DR+ P +NV+H V+++P G F
Sbjct: 44 YNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYF 103
Query: 144 NFSFAEVSYKASEN 157
NF+ A ++Y A E+
Sbjct: 104 NFTSATITYLAQED 117
>UNIPROTKB|E9PQI4 [details] [associations]
symbol:SSR2 "Translocon-associated protein subunit beta"
species:9606 "Homo sapiens" [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR008856 Pfam:PF05753 GO:GO:0005783 GO:GO:0016021
EMBL:AL355388 PANTHER:PTHR12861 HGNC:HGNC:11324 ChiTaRS:SSR2
IPI:IPI00975664 Ensembl:ENST00000531917 ArrayExpress:E9PQI4
Bgee:E9PQI4 Uniprot:E9PQI4
Length = 147
Score = 191 (72.3 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 35/79 (44%), Positives = 52/79 (65%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPK 61
D+ ++Y IYN+G+S A +V +SD SFPPE F I G DR+ P +NV+H V+++P
Sbjct: 39 DLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPL 98
Query: 62 SYGAFNFSFAEVSYKASEN 80
G FNF+ A ++Y A E+
Sbjct: 99 KAGYFNFTSATITYLAQED 117
Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 34/74 (45%), Positives = 48/74 (64%)
Query: 84 YTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAF 143
Y IYN+G+S A +V +SD SFPPE F I G DR+ P +NV+H V+++P G F
Sbjct: 44 YNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYF 103
Query: 144 NFSFAEVSYKASEN 157
NF+ A ++Y A E+
Sbjct: 104 NFTSATITYLAQED 117
>WB|WBGene00020216 [details] [associations]
symbol:trap-2 species:6239 "Caenorhabditis elegans"
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
InterPro:IPR008856 Pfam:PF05753 PIRSF:PIRSF016400 GO:GO:0016021
GO:GO:0009792 GO:GO:0005789 EMBL:FO080299 eggNOG:NOG292722
HOGENOM:HOG000007980 KO:K13250 PANTHER:PTHR12861 PIR:G89450
RefSeq:NP_508150.1 STRING:Q22169 PaxDb:Q22169
EnsemblMetazoa:T04G9.5.1 EnsemblMetazoa:T04G9.5.2 GeneID:180422
KEGG:cel:CELE_T04G9.5 UCSC:T04G9.5.1 CTD:180422 WormBase:T04G9.5
GeneTree:ENSGT00390000005125 InParanoid:Q22169 OMA:VVIGFTS
NextBio:909304 Uniprot:Q22169
Length = 188
Score = 169 (64.5 bits), Expect = 9.1e-13, P = 9.1e-13
Identities = 31/89 (34%), Positives = 54/89 (60%)
Query: 1 MDVVVKYTIYNIGNSVATNVVVSDS-SFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQ 59
MD V++Y +YN+G+ A V + D SFP +F+I G +++P +NVTH V+++
Sbjct: 42 MDFVLEYGLYNVGDKPAQKVTIDDRHSFPTNSFDIVKGLLFVHFEQIPAGSNVTHSVVIR 101
Query: 60 PKSYGAFNFSFAEVSYKASENAEDYTIYN 88
P+++G FN++ A+V+Y T+ N
Sbjct: 102 PRAFGFFNYTAAQVTYYTDNENHHVTLTN 130
Score = 155 (59.6 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 37/112 (33%), Positives = 65/112 (58%)
Query: 52 VTHVVIVQPKSYGAFNFSFAE-VSYKASENAE---DYTIYNIGNSVATNVVVSDS-SFPP 106
V V V ++ AF + + +S A EN + +Y +YN+G+ A V + D SFP
Sbjct: 12 VVSCVDVGTQTRDAFILAHKQPLSTYAVENMDFVLEYGLYNVGDKPAQKVTIDDRHSFPT 71
Query: 107 EAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKA-SEN 157
+F+I G +++P +NVTH V+++P+++G FN++ A+V+Y +EN
Sbjct: 72 NSFDIVKGLLFVHFEQIPAGSNVTHSVVIRPRAFGFFNYTAAQVTYYTDNEN 123
>UNIPROTKB|E9PN13 [details] [associations]
symbol:SSR2 "Translocon-associated protein subunit beta"
species:9606 "Homo sapiens" [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR008856 Pfam:PF05753 GO:GO:0005783 GO:GO:0016021
EMBL:AL355388 PANTHER:PTHR12861 HGNC:HGNC:11324 ChiTaRS:SSR2
IPI:IPI00983684 Ensembl:ENST00000529008 ArrayExpress:E9PN13
Bgee:E9PN13 Uniprot:E9PN13
Length = 93
Score = 120 (47.3 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 23/49 (46%), Positives = 31/49 (63%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQT 50
D+ ++Y IYN+G+S A +V +SD SFPPE F I G DR+ P T
Sbjct: 39 DLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPWT 87
Score = 111 (44.1 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 22/44 (50%), Positives = 27/44 (61%)
Query: 84 YTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQT 127
Y IYN+G+S A +V +SD SFPPE F I G DR+ P T
Sbjct: 44 YNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPWT 87
>UNIPROTKB|E9PLP2 [details] [associations]
symbol:SSR2 "Translocon-associated protein subunit beta"
species:9606 "Homo sapiens" [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR008856 Pfam:PF05753 GO:GO:0005783 GO:GO:0016021
EMBL:AL355388 PANTHER:PTHR12861 HGNC:HGNC:11324 ChiTaRS:SSR2
IPI:IPI00981651 Ensembl:ENST00000531790 ArrayExpress:E9PLP2
Bgee:E9PLP2 Uniprot:E9PLP2
Length = 90
Score = 117 (46.2 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 22/47 (46%), Positives = 30/47 (63%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPP 48
D+ ++Y IYN+G+S A +V +SD SFPPE F I G DR+ P
Sbjct: 39 DLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAP 85
Score = 108 (43.1 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 21/42 (50%), Positives = 26/42 (61%)
Query: 84 YTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPP 125
Y IYN+G+S A +V +SD SFPPE F I G DR+ P
Sbjct: 44 YNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAP 85
>UNIPROTKB|E9PQ05 [details] [associations]
symbol:SSR2 "Translocon-associated protein subunit beta"
species:9606 "Homo sapiens" [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR008856 Pfam:PF05753 GO:GO:0005783 GO:GO:0016021
EMBL:AL355388 PANTHER:PTHR12861 HGNC:HGNC:11324 ChiTaRS:SSR2
IPI:IPI00983094 Ensembl:ENST00000526212 ArrayExpress:E9PQ05
Bgee:E9PQ05 Uniprot:E9PQ05
Length = 85
Score = 117 (46.2 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 22/47 (46%), Positives = 30/47 (63%)
Query: 2 DVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPP 48
D+ ++Y IYN+G+S A +V +SD SFPPE F I G DR+ P
Sbjct: 39 DLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAP 85
Score = 108 (43.1 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 21/42 (50%), Positives = 26/42 (61%)
Query: 84 YTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPP 125
Y IYN+G+S A +V +SD SFPPE F I G DR+ P
Sbjct: 44 YNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAP 85
>WB|WBGene00010678 [details] [associations]
symbol:K08F4.3 species:6239 "Caenorhabditis elegans"
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR008856
Pfam:PF05753 PIRSF:PIRSF016400 GO:GO:0005783 GO:GO:0016021
EMBL:Z68879 PANTHER:PTHR12861 GeneTree:ENSGT00390000005125
PIR:T23480 RefSeq:NP_501843.1 ProteinModelPortal:Q21352
PaxDb:Q21352 EnsemblMetazoa:K08F4.3 GeneID:177881
KEGG:cel:CELE_K08F4.3 UCSC:K08F4.3 CTD:177881 WormBase:K08F4.3
eggNOG:NOG309875 HOGENOM:HOG000017140 InParanoid:Q21352 OMA:EYQIINI
NextBio:898780 Uniprot:Q21352
Length = 182
Score = 108 (43.1 bits), Expect = 0.00012, P = 0.00012
Identities = 29/82 (35%), Positives = 40/82 (48%)
Query: 79 ENAEDYTIYNIGNSVATNVVVSD-SSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQP 137
ENA +Y I NIG S A V +SD SFP + FEI G +P + + H ++V P
Sbjct: 36 ENAFEYQIINIGLSPALKVELSDLKSFPTDRFEILKGSATASFPVIPANSTIYHHIVVIP 95
Query: 138 KSYGAFNFSFAEVSYKASENAE 159
+ A V+Y SE +
Sbjct: 96 RVPQAIEDHDVTVNYTDSETGK 117
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.131 0.379 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 201 191 0.00094 110 3 11 22 0.48 32
31 0.43 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 18
No. of states in DFA: 519 (55 KB)
Total size of DFA: 131 KB (2083 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 16.38u 0.08s 16.46t Elapsed: 00:00:09
Total cpu time: 16.38u 0.08s 16.46t Elapsed: 00:00:09
Start: Thu Aug 15 11:35:34 2013 End: Thu Aug 15 11:35:43 2013