RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy4600
(108 letters)
>d1i16a_ b.36.1.2 (A:) Interleukin 16 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 130
Score = 55.8 bits (134), Expect = 5e-12
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 36 SASFTITTVSFTKGPGFKGLGFSIVGGKDSPKGIMGIYVKTIFPTGQAADTGSLKEDT 93
+A T+ TV+ K GLGFS+ GGK S G + + IF + + +++
Sbjct: 25 TAEATVCTVTLEKMSA--GLGFSLEGGKGSLHGDKPLTINRIFKGAASEQSETVQPGD 80
>d2fnea1 b.36.1.1 (A:1955-2042) Multiple PDZ domain protein {Human
(Homo sapiens) [TaxId: 9606]}
Length = 88
Score = 54.5 bits (131), Expect = 6e-12
Identities = 25/51 (49%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Query: 41 ITTVSFTKGPGFKGLGFSIVGGKDSPKGIMGIYVKTIFPTGQAADTGSLKE 91
+++ +GP GLGFSIVGG SP G + IYVKT+F G A++ G LK
Sbjct: 3 CKSITLERGPD--GLGFSIVGGYGSPHGDLPIYVKTVFAKGAASEDGRLKR 51
>d1t2ma1 b.36.1.1 (A:2-93) Afadin {Human (Homo sapiens) [TaxId:
9606]}
Length = 92
Score = 52.9 bits (127), Expect = 3e-11
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Query: 41 ITTVSFTKGPGFKGLGFSIVGGKDSPKGIMGIYVKTIFPTGQAADTGSLKED 92
I TV+ K G +G SIV K + + +GIYVK++ G A G L
Sbjct: 5 IITVTLKKQNG---MGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAG 53
>d2cssa1 b.36.1.1 (A:8-115) Regulating synaptic membrane
exocytosis protein 1, RIMS1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 108
Score = 53.4 bits (128), Expect = 3e-11
Identities = 13/48 (27%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Query: 43 TVSFTKGPGFKGLGFSIVGGKDSPKGIMGIYVKTIFPTGQAADTGSLK 90
+ K G LG +VGGK + G +G ++ + A G L+
Sbjct: 21 RTTMPKDSG-ALLGLKVVGGKMTDLGRLGAFITKVKKGSLADVVGHLR 67
>d1um1a_ b.36.1.1 (A:) Hypothetical protein KIAA1849 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 110
Score = 53.0 bits (127), Expect = 5e-11
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 36 SASFTITTVSFTKGPGFKGLGFSIVGGKDSPKGIMGIYVKTIFPTGQAADTGSL 89
+S + TV +GP GLG ++ G + G G+Y++T+ P AA G L
Sbjct: 4 GSSGYVFTVELERGPS--GLGMGLIDGMHTHLGAPGLYIQTLLPGSPAAADGRL 55
>d2f0aa1 b.36.1.1 (A:251-342) Segment polarity protein dishevelled
homolog Dvl-2 {African clawed frog (Xenopus laevis)
[TaxId: 8355]}
Length = 92
Score = 52.2 bits (125), Expect = 5e-11
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Query: 41 ITTVSFTKGPGFKGLGFSIVGGKDSPKGIMGIYVKTIFPTGQAADTGSLKEDT 93
I TV+ LG SIVG + +G GIY+ +I G A G ++
Sbjct: 2 IITVTLNMEKY-NFLGISIVGQSNE-RGDGGIYIGSIMKGGAVAADGRIEPGD 52
>d1uhpa_ b.36.1.1 (A:) Hypothetical protein KIAA1095 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 107
Score = 50.0 bits (119), Expect = 7e-10
Identities = 21/77 (27%), Positives = 31/77 (40%), Gaps = 7/77 (9%)
Query: 36 SASFTITTVSFTKGPGFKGLGFSIVGGKDSP-----KGIMGIYVKTIFPTGQAADTGSLK 90
+S T+ + G LGF+I+GG+ S GI+V I +G AA G L+
Sbjct: 4 GSSGKSLTLVLHRDSG--SLGFNIIGGRPSVDNHDGSSSEGIFVSKIVDSGPAAKEGGLQ 61
Query: 91 EDTDYKISNKITTSEYS 107
N S +
Sbjct: 62 IHDRIIEVNGRDLSRAT 78
>d1wf8a1 b.36.1.1 (A:8-101) Neurabin-i {Human (Homo sapiens)
[TaxId: 9606]}
Length = 94
Score = 49.5 bits (118), Expect = 7e-10
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 5/56 (8%)
Query: 41 ITTVSFTKGPGFKGLGFSIVGGK---DSPKGIMGIYVKTIFPTGQAADTGSLKEDT 93
+ V K GLG SI+G D+ +GI+VKT+ G A G ++ +
Sbjct: 3 LFPVELEKDED--GLGISIIGMGVGADAGLEKLGIFVKTVTEGGAAQRDGRIQVND 56
>d2fe5a1 b.36.1.1 (A:223-314) Synapse-associated protein 102
{Human (Homo sapiens) [TaxId: 9606]}
Length = 92
Score = 49.5 bits (118), Expect = 7e-10
Identities = 23/54 (42%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Query: 40 TITTVSFTKGPGFKGLGFSIVGGKDSP--KGIMGIYVKTIFPTGQAADTGSLKE 91
TI V+ KGP KGLGFSI GG + G IY+ I G A G L+
Sbjct: 1 TIMEVNLLKGP--KGLGFSIAGGIGNQHIPGDNSIYITKIIEGGAAQKDGRLQI 52
>d1rgra_ b.36.1.1 (A:) Synaptic protein PSD-95 {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 93
Score = 49.1 bits (117), Expect = 1e-09
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 4/69 (5%)
Query: 41 ITTVSFTKGPGFKGLGFSIVGGKDSP--KGIMGIYVKTIFPTGQAADTGSLKEDTDYKIS 98
++ +G GLGFSI GG D+P I++ I P G AA G L+ +
Sbjct: 2 YEEITLERGNS--GLGFSIAGGTDNPHIGDDPSIFITKIIPGGAAAQDGRLRVNDSILFV 59
Query: 99 NKITTSEYS 107
N++ E +
Sbjct: 60 NEVDVREVT 68
>d2fcfa1 b.36.1.1 (A:1148-1243) Multiple PDZ domain protein {Human
(Homo sapiens) [TaxId: 9606]}
Length = 96
Score = 48.8 bits (116), Expect = 1e-09
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 7/55 (12%)
Query: 43 TVSFTKGPGFKGLGFSIVGGKDSP------KGIMGIYVKTIFPTGQAADTGSLKE 91
V + P K LG SIVGG+ + + GI++K + A G+LK
Sbjct: 4 RVELWREPS-KSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKP 57
>d1ueza_ b.36.1.1 (A:) KIAA1526 protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 101
Score = 48.7 bits (116), Expect = 2e-09
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
Query: 36 SASFTITTVSFTKGPGFKGLGFSIVGGKDSPKGIMGIYVKTIFPTGQAADTGSLKED 92
+S + VS + +GLGFSI GG + +GIYV + P A G D
Sbjct: 4 GSSGEVRLVSLRRAKAHEGLGFSIRGGSEHG---VGIYVSLVEPGSLAEKEGLRVGD 57
>d1ihja_ b.36.1.1 (A:) Inad {Fruit fly (Drosophila melanogaster)
[TaxId: 7227]}
Length = 94
Score = 47.6 bits (113), Expect = 3e-09
Identities = 17/56 (30%), Positives = 21/56 (37%), Gaps = 4/56 (7%)
Query: 40 TITTVSFTKGPGFKGLGFSIVGGKDSP---KGIMGIYVKTIFPTGQAADTGSLKED 92
I V+ K K G IV G+ GI++K I P A G LK
Sbjct: 3 LIHMVTLDKTGK-KSFGICIVRGEVKDSPNTKTTGIFIKGIVPDSPAHLCGRLKVG 57
>d1x6da1 b.36.1.2 (A:8-114) Interleukin 16 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 107
Score = 47.6 bits (113), Expect = 5e-09
Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Query: 41 ITTVSFTKGPGFKGLGFSIVGGKDSPKGIMGIYVKTIFPTGQAADTGSL 89
I K G GLGFS+ GG D I V +FP G A+ G++
Sbjct: 9 IHVTILHKEEG-AGLGFSLAGGADLENK--VITVHRVFPNGLASQEGTI 54
>d1ozia_ b.36.1.1 (A:) Phosphatase hPTP1e {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 99
Score = 46.9 bits (111), Expect = 8e-09
Identities = 18/58 (31%), Positives = 23/58 (39%), Gaps = 7/58 (12%)
Query: 41 ITTVSFTKGPGFKGLGFSIV-----GGKDSPKGIMGIYVKTIFPTGQAADTGSLKEDT 93
V K G LG S+ GG ++ GIYVK I P G A G + +
Sbjct: 5 TFEVELAKTDG--SLGISVTVLFDKGGVNTSVRHGGIYVKAIIPKGAAESDGRIHKGD 60
>d1qava_ b.36.1.1 (A:) Syntrophin {Mouse (Mus musculus) [TaxId:
10090]}
Length = 90
Score = 46.4 bits (110), Expect = 9e-09
Identities = 17/56 (30%), Positives = 23/56 (41%), Gaps = 4/56 (7%)
Query: 37 ASFTITTVSFTKGPGFKGLGFSIVGGKDSPKGIMGIYVKTIFPTGQAADTGSLKED 92
S V+ K GLG SI GG+++ M I + IF A T +L
Sbjct: 1 GSLQRRRVTVRKADA-GGLGISIKGGRENK---MPILISKIFKGLAADQTEALFVG 52
>d1ujua_ b.36.1.1 (A:) Scribble (KIAA0147) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 111
Score = 46.9 bits (111), Expect = 1e-08
Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 7/60 (11%)
Query: 36 SASFTITTVSFTKGPGFKGLGFSIVGGKDSPKGI------MGIYVKTIFPTGQAADTGSL 89
S+ + + K PG + LG SI GG G GI++ + PTG A G L
Sbjct: 5 SSGPGLRELCIQKAPG-ERLGISIRGGARGHAGNPRDPTDEGIFISKVSPTGAAGRDGRL 63
>d1uf1a_ b.36.1.1 (A:) KIAA1526 protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 128
Score = 46.9 bits (111), Expect = 1e-08
Identities = 15/62 (24%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Query: 43 TVSFTKGPGFKGLGFSIVGGKDSPKGIMGIYVKTIFPTGQAADTGSLKEDTDYKISNKIT 102
V+ G G + LG +I GG + +GIY+ + P +A +G D +++ +
Sbjct: 23 KVNLVLGDG-RSLGLTIRGGAEYG---LGIYITGVDPGSEAEGSGLKVGDQILEVNGRSF 78
Query: 103 TS 104
+
Sbjct: 79 LN 80
>d1rzxa_ b.36.1.1 (A:) GTPase-binding domain of the cell polarity
protein par6 (Par-6B) {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 98
Score = 46.1 bits (109), Expect = 2e-08
Identities = 17/59 (28%), Positives = 22/59 (37%), Gaps = 6/59 (10%)
Query: 40 TITTVSFTKGPGFKGLGFSIVGGKDSP------KGIMGIYVKTIFPTGQAADTGSLKED 92
T V K K LGF I G + GI++ + P G A TG L +
Sbjct: 2 THRRVRLLKHGSDKPLGFYIRDGTSVRVTASGLEKQPGIFISRLVPGGLAESTGLLAVN 60
>d1x5ra1 b.36.1.1 (A:8-106) Glutamate receptor interacting protein
2, GRIP2 (KIAA1719) {Human (Homo sapiens) [TaxId:
9606]}
Length = 99
Score = 46.1 bits (109), Expect = 2e-08
Identities = 14/61 (22%), Positives = 20/61 (32%), Gaps = 2/61 (3%)
Query: 33 AGKSASFTITTVSFTKGPGFKGLGFSIVGGKDSPKGI-MGIYVKTIFPTGQAADTGSLKE 91
G+ T V P G G + GG + + + V I P A G L+
Sbjct: 1 GGQIVHTETTEVVLCGDPL-SGFGLQLQGGIFATETLSSPPLVCFIEPDSPAERCGLLQV 59
Query: 92 D 92
Sbjct: 60 G 60
>d2csja1 b.36.1.1 (A:8-111) Tight junction protein ZO-2, Tjp2
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 104
Score = 46.0 bits (109), Expect = 2e-08
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 6/52 (11%)
Query: 43 TVSFTKGPGFKGLGFSIVGGKDSP---KGIMGIYVKTIFPTGQAADTGSLKE 91
TV+ K +G G ++ GG+D+P G I + + P G A G L+E
Sbjct: 10 TVTLQKDSK-RGFGIAVSGGRDNPHFENGETSIVISDVLPGGPAD--GLLQE 58
>d1whaa_ b.36.1.1 (A:) Scribble (KIAA0147) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 105
Score = 45.7 bits (108), Expect = 2e-08
Identities = 22/61 (36%), Positives = 26/61 (42%), Gaps = 5/61 (8%)
Query: 34 GKSASFTITTVSFTKGPGFKGLGFSIVGGKDSP---KGIMGIYVKTIFPTGQAADTGSLK 90
G S S + GLGFSI GGK S G GI+V I G A G+L+
Sbjct: 1 GSSGSSGRHVACLARSER--GLGFSIAGGKGSTPYRAGDAGIFVSRIAEGGAAHRAGTLQ 58
Query: 91 E 91
Sbjct: 59 V 59
>d1ujda_ b.36.1.1 (A:) Hypothetical protein KIAA0559 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 117
Score = 45.3 bits (107), Expect = 5e-08
Identities = 19/39 (48%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Query: 53 KGLGFSIVGGKDSP--KGIMGIYVKTIFPTGQAADTGSL 89
GLG IVGGK+ P G +G Y+ I P G A TG L
Sbjct: 30 NGLGIRIVGGKEIPGHSGEIGAYIAKILPGGSAEQTGKL 68
>d1m5za_ b.36.1.1 (A:) Glutamate receptor interacting protein {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 91
Score = 44.5 bits (105), Expect = 7e-08
Identities = 17/51 (33%), Positives = 22/51 (43%), Gaps = 5/51 (9%)
Query: 41 ITTVSFTKGPGFKGLGFSIVGGKDSPKGIMGIYVKTIFPTGQAADTGSLKE 91
+ V+ K G + GFS+ G G+YVK I P D G LK
Sbjct: 7 LHKVTLYKDSGMEDFGFSVADGLLEK----GVYVKNIRP-AGPGDLGGLKP 52
>d1wg6a_ b.36.1.1 (A:) Partitioning-defective 3-like protein,
PAR3-L (RIKEN cDNA 2810455b10) {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 127
Score = 44.7 bits (105), Expect = 9e-08
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Query: 43 TVSFTKGPGFKGLGFSIVGGKDSPKGI-MGIYVKTIFPTGQAADTGSLK 90
+ G GLG S+ G K G +GI++K+I G A G L+
Sbjct: 28 EIPLNDS-GSAGLGVSLKGNKSRETGTDLGIFIKSIIHGGAAFKDGRLR 75
>d1n7ea_ b.36.1.1 (A:) Glutamate receptor-interacting protein 1,
GRIP1 {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 95
Score = 44.1 bits (104), Expect = 9e-08
Identities = 13/52 (25%), Positives = 22/52 (42%), Gaps = 5/52 (9%)
Query: 40 TITTVSFTKGPGFKGLGFSIVGGKDSPKGIMGIYVKTIFPTGQAADTGSLKE 91
I TV + G LG +I G ++ I + ++ G A TG++
Sbjct: 3 IIYTVELKRYGG--PLGITISGTEEPF---DPIIISSLTKGGLAERTGAIHI 49
>d1wh1a_ b.36.1.1 (A:) Hypothetical protein KIAA1095 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 124
Score = 44.6 bits (105), Expect = 1e-07
Identities = 18/78 (23%), Positives = 26/78 (33%), Gaps = 18/78 (23%)
Query: 12 DQEQEEDEDEEEESQFCTLRRAGKSASFTITTVSFTKGPGFKGLGFSIVGGKDSPKGIMG 71
D QE D +E E + V + LG ++ D +G
Sbjct: 8 DIHQEMDREELE-----------------LEEVDLYRMNSQDKLGLTVCYRTDDEDD-IG 49
Query: 72 IYVKTIFPTGQAADTGSL 89
IY+ I P AA G +
Sbjct: 50 IYISEIDPNSIAAKDGRI 67
>d1uewa_ b.36.1.1 (A:) Membrane associated guanylate kinase
inverted-2 (MAGI-2, KIAA0705) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 114
Score = 44.3 bits (104), Expect = 1e-07
Identities = 12/60 (20%), Positives = 20/60 (33%), Gaps = 5/60 (8%)
Query: 34 GKSASFTITTVSFTKGPGFKGLGFSIVGGKDSPKG----IMGIYVKTIFPTGQAADTGSL 89
G S S + V + +G GF I+ + P+ + + I A L
Sbjct: 4 GSSGSLQTSDVVIHRKEN-EGFGFVIISSLNRPESGSTITVPHKIGRIIDGSPADRCAKL 62
>d1v5qa_ b.36.1.1 (A:) Glutamate receptor interacting protein
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 122
Score = 44.2 bits (104), Expect = 1e-07
Identities = 13/61 (21%), Positives = 20/61 (32%), Gaps = 2/61 (3%)
Query: 33 AGKSASFTITTVSFTKGPGFKGLGFSIVGGKDSPKGI-MGIYVKTIFPTGQAADTGSLKE 91
AG+ T V T P G G + G + + + + I A G L+
Sbjct: 8 AGQVVHTETTEVVLTADPV-TGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQI 66
Query: 92 D 92
Sbjct: 67 G 67
>d1x5na1 b.36.1.1 (A:8-108) Harmonin {Human (Homo sapiens) [TaxId:
9606]}
Length = 101
Score = 43.3 bits (102), Expect = 2e-07
Identities = 14/55 (25%), Positives = 23/55 (41%), Gaps = 3/55 (5%)
Query: 46 FTKGPGFKGLGFSIVGGKDSPKGIMGIYVKTIFPTGQAADTGSLKEDTDYKISNK 100
F G +GLG SI G GI++ + P +A+ G D +++
Sbjct: 13 FISLVGSRGLGCSISSGPIQK---PGIFISHVKPGSLSAEVGLEIGDQIVEVNGV 64
>d1p1da2 b.36.1.1 (A:115-213) Glutamate receptor interacting
protein {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 99
Score = 43.3 bits (102), Expect = 2e-07
Identities = 11/49 (22%), Positives = 15/49 (30%), Gaps = 2/49 (4%)
Query: 41 ITTVSFTKGPGFKGLGFSIVGGKDSPKGIMGIYVKTIFPTGQAADTGSL 89
V K LG +I G + + I A TG+L
Sbjct: 11 TFHVKLPKKHS-VELGITISSPSSRKPG-DPLVISDIKKGSVAHRTGTL 57
>d1v62a_ b.36.1.1 (A:) Glutamate receptor interacting protein 2,
GRIP2 (KIAA1719) {Human (Homo sapiens) [TaxId: 9606]}
Length = 117
Score = 43.9 bits (103), Expect = 2e-07
Identities = 13/50 (26%), Positives = 17/50 (34%), Gaps = 3/50 (6%)
Query: 43 TVSFTKGPGFKGLGFSIVGGKDSPKGIMGIYVKTIFPTGQAADTGSLKED 92
V K PG LG S+ K I + I P +G+L
Sbjct: 18 MVEIVKTPG-SALGISLTTTSLRNKS--VITIDRIKPASVVDRSGALHPG 64
>d1wi4a1 b.36.1.1 (A:8-103) Syntaxin binding protein 4 {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 96
Score = 43.0 bits (101), Expect = 2e-07
Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 4/51 (7%)
Query: 41 ITTVSFTKGPGFKGLGFSIVGGKDSPKGIMGIYVKTIFPTGQAADTGSLKE 91
++ TK G LG I+GG + +G +Y+ + P G G LK
Sbjct: 9 FRVITVTKETG---LGLKILGGINRNEG-PLVYIHEVIPGGDCYKDGRLKP 55
>d1wfva_ b.36.1.1 (A:) Membrane associated guanylate kinase
inverted-2 (MAGI-2, KIAA0705) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 103
Score = 41.8 bits (98), Expect = 6e-07
Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 5/49 (10%)
Query: 39 FTITTVSFTKGPGFKGLGFSIVGGKDSPKGIMGIYVKTIFPTGQAADTG 87
F TV KG KG GFSI GG++ M +YV + G A G
Sbjct: 10 FDYFTVDMEKGA--KGFGFSIRGGREYK---MDLYVLRLAEDGPAIRNG 53
>d2h3la1 b.36.1.1 (A:1310-1412) Erbin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 103
Score = 41.8 bits (98), Expect = 8e-07
Identities = 16/47 (34%), Positives = 19/47 (40%), Gaps = 8/47 (17%)
Query: 43 TVSFTKGPGFKGLGFSIVGGKDSP-----KGIMGIYVKTIFPTGQAA 84
V K P LGFSI GG GI+V + P G A+
Sbjct: 14 RVRVEKDPE---LGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPAS 57
>d1x5qa1 b.36.1.1 (A:8-104) Scribble (KIAA0147) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 97
Score = 41.4 bits (97), Expect = 9e-07
Identities = 14/52 (26%), Positives = 22/52 (42%), Gaps = 6/52 (11%)
Query: 43 TVSFTKGPGFKGLGFSIVGGKDSP---KGIMGIYVKTIFPTGQAADTGSLKE 91
T++ + G GLG SI GGK S GI++ + A ++
Sbjct: 11 TLTILRQTG--GLGISIAGGKGSTPYKGDDEGIFISRVSE-EGPAARAGVRV 59
>d1ueqa_ b.36.1.1 (A:) Membrane associated guanylate kinase
inverted-2 (MAGI-2, KIAA0705) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 123
Score = 41.9 bits (98), Expect = 9e-07
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 5/51 (9%)
Query: 40 TITTVSFTKGPGFKGLGFSIVGGKDSPKGIMGIYVKTIFPTGQAADTGSLK 90
T + + K G GF+I+GG + + VK++ P G AA G ++
Sbjct: 19 TFLSTTLKKSN--MGFGFTIIGGDEPD---EFLQVKSVIPDGPAAQDGKME 64
>d1rgwa_ b.36.1.1 (A:) Zasp (Cypher, Oracle 1) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 85
Score = 40.2 bits (94), Expect = 2e-06
Identities = 14/49 (28%), Positives = 21/49 (42%), Gaps = 7/49 (14%)
Query: 43 TVSFTKGPGFKGLGFSIVGGKDSPKGIMGIYVKTIFPTGQAADTGSLKE 91
+V+ T + GF + GGKD M + + I P G A L +
Sbjct: 4 SVTLTGPGPW---GFRLQGGKDFN---MPLTISRITP-GSKAAQSQLSQ 45
>d1ufxa_ b.36.1.1 (A:) KIAA1526 protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 103
Score = 39.9 bits (93), Expect = 4e-06
Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 5/58 (8%)
Query: 34 GKSASFTITTVSFTKGPGFKGLGFSIVGGKDSPKGIMGIYVKTIFPTGQAADTGSLKE 91
G S S + T V K LG +I GG ++ + + TI G A + G LK
Sbjct: 1 GSSGS-SGTLVRVKKSAA--TLGIAIEGGANTRQP--LPRIVTIQRGGSAHNCGQLKV 53
>d1uepa_ b.36.1.1 (A:) Membrane associated guanylate kinase
inverted-2 (MAGI-2, KIAA0705) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 103
Score = 39.9 bits (93), Expect = 4e-06
Identities = 13/58 (22%), Positives = 20/58 (34%), Gaps = 5/58 (8%)
Query: 36 SASFTITTVSFTKGPGFKGLGFSIVGGKDSPKGIMGIYVKTIFPTGQAADTGSLKEDT 93
S+ + V + G GF I+GG + I + + G A G L
Sbjct: 5 SSGYKELDVHLRRMES--GFGFRILGGDEPG---QPILIGAVIAMGSADRDGRLHPGD 57
>d1wi2a_ b.36.1.1 (A:) PDZ domain containing protein 11, Pdzk11
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 104
Score = 39.6 bits (92), Expect = 5e-06
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Query: 43 TVSFTKGPGFKGLGFSIVGGKDSPKGIMGIYVKTIFPTGQAADTGSLKED 92
V+ K PG LGF+I GGK S +GI++ + P A G + D
Sbjct: 18 IVTLKKPPG-AQLGFNIRGGKASQ---LGIFISKVIPDSDAHRAGLQEGD 63
>d1tp5a1 b.36.1.1 (A:302-403) Synaptic protein PSD-95 {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 102
Score = 39.5 bits (92), Expect = 5e-06
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 6/51 (11%)
Query: 43 TVSFTKGPGFKGLGFSIVGGKDSPKGIMGIYVKTIFPTGQAADTGSLKEDT 93
+ +G GLGF+IVGG+D GI++ I G A +G L++
Sbjct: 12 RIVIHRGST--GLGFNIVGGEDGE----GIFISFILAGGPADLSGELRKGD 56
>d1g9oa_ b.36.1.1 (A:) Na+/H+ exchanger regulatory factor, NHERF
{Human (Homo sapiens) [TaxId: 9606]}
Length = 91
Score = 38.3 bits (89), Expect = 2e-05
Identities = 13/45 (28%), Positives = 18/45 (40%), Gaps = 6/45 (13%)
Query: 43 TVSFTKGPGFKGLGFSIVGGKDSPKGIMGIYVKTIFPTGQAADTG 87
KGP G GF + G K +G Y++ + P A G
Sbjct: 6 LCCLEKGPN--GYGFHLHGEKGK----LGQYIRLVEPGSPAEKAG 44
>d1qaua_ b.36.1.1 (A:) Neuronal nitric oxide synthase, NNOS {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 112
Score = 38.5 bits (89), Expect = 2e-05
Identities = 12/55 (21%), Positives = 20/55 (36%), Gaps = 6/55 (10%)
Query: 41 ITTVSFTKGPGFKGLGFSIVGGKDSPKGIMGIYVKTIFPTGQAADTGSLKEDTDY 95
+ +V K GLGF + P + + + G AA+ L + D
Sbjct: 2 VISVRLFKRK-VGGLGFLVKERVSKP----PVIISDLIR-GGAAEQSGLIQAGDI 50
>d1x45a1 b.36.1.1 (A:8-92) Amyloid beta A4 precursor
protein-binding family A member 1 (APBA1, X11) {Human
(Homo sapiens) [TaxId: 9606]}
Length = 85
Score = 37.5 bits (87), Expect = 2e-05
Identities = 11/49 (22%), Positives = 17/49 (34%), Gaps = 2/49 (4%)
Query: 44 VSFTKGPGFKGLGFSIVGGKDSPKGIMGIYVKTIFPTGQAADTGSLKED 92
V K G + LG IV + + + + G A +G L
Sbjct: 2 VFIEKQKG-EILGVVIVESGWGSI-LPTVIIANMMHGGPAEKSGKLNIG 48
>d1uita_ b.36.1.1 (A:) Discs large 5 protein KIAA0583 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 117
Score = 38.0 bits (88), Expect = 2e-05
Identities = 17/57 (29%), Positives = 20/57 (35%), Gaps = 7/57 (12%)
Query: 31 RRAGKSASFTITTVSFTKGPGFKGLGFSIVGGKDSPKGIMGIYVKTIFPTGQAADTG 87
RR + V KG LG SIV G+ GIYV + A G
Sbjct: 10 RRKDRPYVEEPRHVKVQKGSE--PLGISIVSGEKG-----GIYVSKVTVGSIAHQAG 59
>d1vb7a_ b.36.1.1 (A:) PDZ-LIM protein mystique {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 94
Score = 37.6 bits (87), Expect = 3e-05
Identities = 16/58 (27%), Positives = 21/58 (36%), Gaps = 8/58 (13%)
Query: 34 GKSASFTITTVSFTKGPGFKGLGFSIVGGKDSPKGIMGIYVKTIFPTGQAADTGSLKE 91
G S S +T GP GF I GG+D I V + A+ L+
Sbjct: 1 GSSGSSGLTVD--VAGPA--PWGFRISGGRDFH---TPIIVTKVTE-RGKAEAADLRP 50
>d1q3oa_ b.36.1.1 (A:) Shank1, PDZ domain {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 104
Score = 37.7 bits (87), Expect = 3e-05
Identities = 13/54 (24%), Positives = 20/54 (37%), Gaps = 10/54 (18%)
Query: 43 TVSFTKGPGFKGLGFSIVGGKD---------SPKGIMGIYVKTIFPTGQAADTG 87
TV K +G GF + G K +P Y++++ G A G
Sbjct: 8 TVLLQKKDS-EGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAG 60
>d2cs5a1 b.36.1.1 (A:8-113) Tyrosine-protein phosphatase
non-receptor type 4, PTPN4 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 106
Score = 37.6 bits (87), Expect = 3e-05
Identities = 9/43 (20%), Positives = 15/43 (34%), Gaps = 4/43 (9%)
Query: 41 ITTVSFTKGPGFKGLGFSIVGGKDSPKGIMGIYVKTIFPTGQA 83
+ + GF++ GG D M + V + P A
Sbjct: 9 LVLIRMKPDE-NGRFGFNVKGGYDQK---MPVIVSRVAPGTPA 47
>d1v6ba_ b.36.1.1 (A:) Harmonin {Mouse (Mus musculus) [TaxId:
10090]}
Length = 118
Score = 37.7 bits (87), Expect = 3e-05
Identities = 10/39 (25%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query: 53 KGLGFSIVGGKDSPKGIMGIYVKTIFPTGQAADTGSLKE 91
L ++ GG DSP + + V ++ G A G + +
Sbjct: 28 GSLDLALEGGVDSP--VGKVVVSAVYEGGAAERHGGVVK 64
>d1kwaa_ b.36.1.1 (A:) Cask/Lin-2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 88
Score = 36.7 bits (85), Expect = 5e-05
Identities = 8/45 (17%), Positives = 14/45 (31%), Gaps = 6/45 (13%)
Query: 43 TVSFTKGPGFKGLGFSIVGGKDSPKGIMGIYVKTIFPTGQAADTG 87
V F K + +G ++ + + V I G G
Sbjct: 4 LVQFQKNTD-EPMGITLKMNELN-----HCIVARIMHGGMIHRQG 42
>d1wf7a_ b.36.1.1 (A:) Enigma homolog ENH {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 103
Score = 36.2 bits (83), Expect = 1e-04
Identities = 10/42 (23%), Positives = 17/42 (40%), Gaps = 4/42 (9%)
Query: 51 GFKGLGFSIVGGKDSPKGIMGIYVKTIFPTGQAADTGSLKED 92
G GF + GGKD M + + ++ G A ++
Sbjct: 13 GPAPWGFRLQGGKDFN---MPLTISSLKD-GGKASQAHVRIG 50
>d1w9ea1 b.36.1.1 (A:110-194) Syntenin 1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 85
Score = 35.6 bits (82), Expect = 1e-04
Identities = 8/45 (17%), Positives = 15/45 (33%), Gaps = 7/45 (15%)
Query: 43 TVSFTKGPGFKGLGFSIVGGKDSPKGIMGIYVKTIFPTGQAADTG 87
V K +G + + GI+V+ + A+ G
Sbjct: 5 EVILCKDQ-DGKIGLRLKSIDN------GIFVQLVQANSPASLVG 42
>d1wifa_ b.36.1.1 (A:) hypothetical PDZ domain containing protein
Uqcrc2 (4930408O21Rik) {Mouse (Mus musculus) [TaxId:
10090]}
Length = 126
Score = 35.0 bits (80), Expect = 3e-04
Identities = 13/70 (18%), Positives = 25/70 (35%), Gaps = 8/70 (11%)
Query: 22 EEESQFCTLRRAGKSASFTITTVSFTKGPGFKGLGFSIVGGKDSPKGIMGIYVKTIFPTG 81
+ E + + +A S+ + T G GLG ++ + + + G
Sbjct: 9 KNEKEQLSKAKASVSSLNKVIQTKLTVGN--LGLGLVVIQNGP------YLQISHLINKG 60
Query: 82 QAADTGSLKE 91
AA G L+
Sbjct: 61 AAASDGILQP 70
>d1va8a1 b.36.1.1 (A:8-107) Maguk p55 subfamily member 5 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 100
Score = 34.5 bits (79), Expect = 5e-04
Identities = 12/56 (21%), Positives = 18/56 (32%), Gaps = 7/56 (12%)
Query: 34 GKSASFTITTVSFTKGPGFKGLGFSIVGGKDSPKGIMGIYVKTIFPTGQAADTGSL 89
G T+ V K LG ++ D + + I G A +G L
Sbjct: 12 GHYGGETVKIVRIEKARD-IPLGATVRNEMD------SVIISRIVKGGAAEKSGLL 60
>d1v5la_ b.36.1.1 (A:) Alpha-actinin-2 associated LIM protein
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 103
Score = 34.2 bits (78), Expect = 5e-04
Identities = 12/42 (28%), Positives = 16/42 (38%), Gaps = 4/42 (9%)
Query: 50 PGFKGLGFSIVGGKDSPKGIMGIYVKTIFPTGQAADTGSLKE 91
PG GF + GG D + + I P G A +L
Sbjct: 12 PGPAPWGFRLSGGIDFN---QPLVITRITP-GSKAAAANLCP 49
>d2f5ya1 b.36.1.1 (A:19-95) Regulator of G-protein signaling 3,
RGS3 {Human (Homo sapiens) [TaxId: 9606]}
Length = 77
Score = 33.6 bits (77), Expect = 7e-04
Identities = 9/44 (20%), Positives = 16/44 (36%), Gaps = 9/44 (20%)
Query: 44 VSFTKGPGFKGLGFSIVGGKDSPKGIMGIYVKTIFPTGQAADTG 87
++ +G G GF+I + V+ + G A G
Sbjct: 1 ITIPRGKD--GFGFTICCD-------SPVRVQAVDSGGPAERAG 35
>d1y7na1 b.36.1.1 (A:12-90) Amyloid beta A4 precursor
protein-binding family A member 1 (APBA1, X11) {Human
(Homo sapiens) [TaxId: 9606]}
Length = 79
Score = 33.6 bits (77), Expect = 7e-04
Identities = 11/51 (21%), Positives = 20/51 (39%), Gaps = 11/51 (21%)
Query: 41 ITTVSFTKGPGFKGLGFSIVGGKDSPKGIMGIYVKTIFPTGQAADTGSLKE 91
+TTV + LGFS+ G + ++ G A+ G ++
Sbjct: 1 VTTVLIRRPDLRYQLGFSVQNG----------IICSLMR-GGIAERGGVRV 40
>d1vaea_ b.36.1.1 (A:) Rhophilin-2 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 111
Score = 30.4 bits (68), Expect = 0.017
Identities = 10/42 (23%), Positives = 16/42 (38%), Gaps = 9/42 (21%)
Query: 43 TVSFTKGPGFKGLGFSIVGGKDSPKGIMGIYVKTIFPTGQAA 84
+ FT G LGF++ G + V + P A+
Sbjct: 18 GIHFTVEEG--DLGFTLRGNTP-------VQVHFLDPHCSAS 50
>d1ujva_ b.36.1.1 (A:) Membrane associated guanylate kinase
inverted-2 (MAGI-2, KIAA0705) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 96
Score = 29.9 bits (67), Expect = 0.020
Identities = 11/59 (18%), Positives = 19/59 (32%), Gaps = 11/59 (18%)
Query: 33 AGKSASFTITTVSFTKGPGFKGLGFSIVGGKDSPKGIMGIYVKTIFPTGQAADTGSLKE 91
+G S + T++ KG +G GF+I + + L E
Sbjct: 3 SGSSGQAELMTLTIVKGA--QGFGFTIADSPTGQR---------VKQILDIQGCPGLCE 50
>d2id3a2 a.121.1.1 (A:81-203) Putative transcriptional regulator
SCO5951 {Streptomyces coelicolor [TaxId: 1902]}
Length = 123
Score = 25.2 bits (55), Expect = 1.2
Identities = 7/9 (77%), Positives = 9/9 (100%)
Query: 84 ADTGSLKED 92
ADTG+L+ED
Sbjct: 1 ADTGALEED 9
>d1fc6a3 b.36.1.3 (A:157-248) Photosystem II D1 C-terminal
processing protease {Algae (Scenedesmus obliquus)
[TaxId: 3088]}
Length = 92
Score = 23.8 bits (51), Expect = 3.4
Identities = 12/41 (29%), Positives = 15/41 (36%), Gaps = 3/41 (7%)
Query: 52 FKGLGFSIVGGKDSPKGIMGIYVKTIFPTGQAADTGSLKED 92
G+G I S K + V T P G A G+ D
Sbjct: 4 VTGVGLEITYDGGSGK---DVVVLTPAPGGPAEKAGARAGD 41
>d2et1a1 b.82.1.2 (A:1-201) Germin {Barley (Hordeum vulgare)
[TaxId: 4513]}
Length = 201
Score = 23.3 bits (50), Expect = 7.4
Identities = 11/44 (25%), Positives = 20/44 (45%), Gaps = 3/44 (6%)
Query: 30 LRRAGKSAS---FTITTVSFTKGPGFKGLGFSIVGGKDSPKGIM 70
L +AG +++ +T + + PG LG S+ +P G
Sbjct: 42 LTKAGNTSTPNGSAVTELDVAEWPGTNTLGVSMNRVDFAPGGTN 85
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.309 0.130 0.358
Gapped
Lambda K H
0.267 0.0599 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 370,714
Number of extensions: 15360
Number of successful extensions: 133
Number of sequences better than 10.0: 1
Number of HSP's gapped: 94
Number of HSP's successfully gapped: 65
Length of query: 108
Length of database: 2,407,596
Length adjustment: 68
Effective length of query: 40
Effective length of database: 1,473,956
Effective search space: 58958240
Effective search space used: 58958240
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 47 (22.2 bits)