Diaphorina citri psyllid: psy4600


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------11
MITFAFQEENEDQEQEEDEDEEEESQFCTLRRAGKSASFTITTVSFTKGPGFKGLGFSIVGGKDSPKGIMGIYVKTIFPTGQAADTGSLKEDTDYKISNKITTSEYSP
cEEEEEEccccccccccccHHHHHHcEEEcccccccccccEEEEEEEEccccccccEEEEcccccccccccEEEEEEccccccccccccccccEEEEEcccccccccc
*ITF*****************************GKSASFTITTVSFTKGPGFKGLGFSIVGGKDSPKGIMGIYVKTIFPTGQAADTGSLKEDTDYKISNKITT*****
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MITFAxxxxxxxxxxxxxxxxxxxxxFCTLRRAGKSASFTITTVSFTKGPGFKGLGFSIVGGKDSPKGIMGIYVKTIFPTGQAADTGSLKEDTDYKISNKITTSEYSP

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
PDZ domain-containing protein 2 confidentQ9QZR8
PDZ domain-containing protein 2 confidentO15018

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0005783 [CC]endoplasmic reticulumprobableGO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0030595 [BP]leukocyte chemotaxisprobableGO:0040011, GO:0051716, GO:0006935, GO:0042330, GO:0048870, GO:0050896, GO:0009987, GO:0044763, GO:0006928, GO:0002376, GO:0050900, GO:0051674, GO:0008150, GO:0070887, GO:0060326, GO:0042221, GO:0051179, GO:0016477, GO:0009605, GO:0044699
GO:0050930 [BP]induction of positive chemotaxisprobableGO:0040012, GO:0032103, GO:0040017, GO:0032101, GO:0048584, GO:0048583, GO:0050795, GO:0050789, GO:0008150, GO:0050926, GO:0050927, GO:0050920, GO:0050921, GO:0048518, GO:0065007, GO:0048520
GO:0007155 [BP]cell adhesionprobableGO:0008150, GO:0009987, GO:0022610, GO:0044763, GO:0044699
GO:0044700 [BP]single organism signalingprobableGO:0008150, GO:0023052, GO:0044699
GO:0007154 [BP]cell communicationprobableGO:0008150, GO:0009987, GO:0044763, GO:0044699
GO:0005125 [MF]cytokine activityprobableGO:0005102, GO:0003674, GO:0005488, GO:0005515
GO:0050794 [BP]regulation of cellular processprobableGO:0008150, GO:0065007, GO:0050789
GO:0014069 [CC]postsynaptic densityprobableGO:0030425, GO:0043229, GO:0043228, GO:0044430, GO:0044327, GO:0043226, GO:0005856, GO:0044446, GO:0044309, GO:0097458, GO:0044456, GO:0043005, GO:0042995, GO:0043197, GO:0043232, GO:0044463, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044424, GO:0044422, GO:0045202
GO:0031410 [CC]cytoplasmic vesicleprobableGO:0005737, GO:0031982, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043226
GO:0005634 [CC]nucleusprobableGO:0043231, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0044424, GO:0043227, GO:0043226
GO:0016324 [CC]apical plasma membraneprobableGO:0045177, GO:0016020, GO:0044464, GO:0005623, GO:0005575, GO:0071944, GO:0005886, GO:0044425, GO:0044459
GO:0005912 [CC]adherens junctionprobableGO:0005575, GO:0070161, GO:0030054
GO:0048731 [BP]system developmentprobableGO:0032502, GO:0032501, GO:0044707, GO:0048856, GO:0008150, GO:0007275, GO:0044699
GO:0005923 [CC]tight junctionprobableGO:0005575, GO:0070160, GO:0043296, GO:0030054, GO:0005911
GO:0043220 [CC]Schmidt-Lanterman incisureprobableGO:0005575, GO:0043209, GO:0043218, GO:0044464, GO:0005623
GO:0005576 [CC]extracellular regionprobableGO:0005575
GO:0016327 [CC]apicolateral plasma membraneprobableGO:0016020, GO:0044464, GO:0005623, GO:0005575, GO:0071944, GO:0005886, GO:0044425, GO:0044459

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 3GSL, chain A
Confidence level:very confident
Coverage over the Query: 23-107
View the alignment between query and template
View the model in PyMOL
Template: 3EGG, chain C
Confidence level:very confident
Coverage over the Query: 3-107
View the alignment between query and template
View the model in PyMOL