Query psy4606
Match_columns 69
No_of_seqs 139 out of 1261
Neff 10.8
Searched_HMMs 29240
Date Fri Aug 16 21:13:13 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4606.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/4606hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3knb_B Obscurin-like protein 1 99.4 4.3E-13 1.5E-17 63.6 5.5 47 8-57 12-58 (107)
2 3knb_A Titin; IG-like, titin, 99.4 7.9E-13 2.7E-17 61.9 4.9 45 8-55 4-48 (100)
3 3qp3_A Titin; I-SET IG-like, s 99.4 7E-13 2.4E-17 61.8 3.9 51 4-57 3-53 (103)
4 2cr6_A KIAA1556 protein, obscu 99.3 1.4E-12 4.7E-17 62.1 3.2 53 2-57 5-58 (115)
5 2kdg_A Myotilin; immonoglobuli 99.3 5.8E-12 2E-16 58.3 5.1 48 7-57 3-50 (100)
6 1fhg_A Telokin; immunoglobulin 99.3 1E-11 3.4E-16 61.8 5.7 51 4-57 36-86 (154)
7 2edj_A Roundabout homolog 2; K 99.3 3.1E-11 1.1E-15 55.9 6.4 44 8-54 7-50 (100)
8 3kvq_A Vascular endothelial gr 99.3 5.9E-12 2E-16 59.0 3.8 51 3-56 4-54 (108)
9 1g1c_A Immunoglobulin-like dom 99.3 2.8E-11 9.7E-16 55.8 6.1 48 8-58 4-51 (99)
10 1u2h_A APEG-1, aortic preferen 99.3 2.8E-11 9.6E-16 55.8 6.0 48 8-58 4-51 (99)
11 4fa8_A Secreted protein BARF1; 99.3 9.1E-12 3.1E-16 64.5 4.8 48 2-51 99-146 (203)
12 2v9t_A Roundabout homolog 1; s 99.3 9.4E-12 3.2E-16 59.1 4.3 45 7-54 7-51 (117)
13 3puc_A Titin; I-SET IG-like do 99.2 4.7E-11 1.6E-15 55.0 5.9 47 8-57 5-51 (99)
14 2cqv_A MLCK, myosin light chai 99.2 9.4E-11 3.2E-15 55.5 6.7 46 8-56 6-51 (114)
15 2yr3_A Myosin light chain kina 99.2 1.2E-11 4E-16 57.2 3.2 49 3-54 5-53 (99)
16 2eo9_A Roundabout homolog 1; b 99.2 4.1E-11 1.4E-15 57.0 4.3 45 8-55 7-51 (118)
17 2lvc_A Obscurin-like protein 1 99.2 4.8E-11 1.6E-15 55.1 4.3 53 8-62 3-55 (91)
18 2dm3_A KIAA0992 protein, palla 99.2 7.5E-11 2.6E-15 55.3 4.7 47 8-57 8-54 (110)
19 2kkq_A Myotilin; unknown funct 99.1 1.4E-10 4.8E-15 55.3 5.5 45 8-55 14-58 (116)
20 3irg_B Obscurin-like protein 1 99.1 1.1E-10 3.9E-15 54.4 4.8 47 7-56 11-57 (107)
21 3kld_A Contactin 4, axcam, BIG 99.1 3.7E-10 1.3E-14 62.5 7.4 52 2-56 288-339 (384)
22 1wit_A Twitchin 18TH IGSF modu 99.1 1.3E-10 4.4E-15 53.2 4.8 43 8-53 1-45 (93)
23 2dm2_A Palladin; beta-sandwich 99.1 1.7E-10 5.9E-15 54.2 5.3 45 8-55 7-51 (110)
24 3irg_A Titin; IG-like, titin, 99.1 5.7E-10 2E-14 51.3 6.3 44 8-54 4-47 (100)
25 2rik_A Titin; I-SET IG fold, p 99.1 8.2E-10 2.8E-14 58.6 7.5 54 2-58 185-238 (284)
26 3sbw_C Programmed cell death 1 99.1 5.5E-10 1.9E-14 57.4 6.6 51 2-54 109-159 (222)
27 2wv3_A Neuroplastin; igcam, me 99.1 3E-09 1E-13 53.7 9.1 51 2-54 85-136 (190)
28 3bfo_A Mucosa-associated lymph 99.1 1.2E-09 4.3E-14 49.7 6.8 44 9-55 3-46 (91)
29 3b43_A Titin; I-SET IG fold, e 99.1 5E-10 1.7E-14 64.8 6.6 53 2-57 377-429 (570)
30 1epf_A NCAM, protein (neural c 99.1 9.7E-10 3.3E-14 55.4 6.7 50 2-54 93-142 (191)
31 1waa_A Titin; metal binding pr 99.1 7.1E-10 2.4E-14 51.2 5.5 47 9-59 5-51 (93)
32 2v44_A NCAM2, neural cell adhe 99.1 2E-09 7E-14 54.2 7.7 49 3-54 90-138 (189)
33 2c5d_C AXL oncogene, tyrosine- 99.0 1.3E-09 4.5E-14 55.2 6.8 50 2-54 99-149 (195)
34 2e7c_A Myosin-binding protein 99.0 9.1E-10 3.1E-14 52.4 5.8 47 7-54 19-66 (118)
35 1wwb_X Protein (brain derived 99.0 6.1E-10 2.1E-14 52.1 5.0 46 6-57 1-46 (103)
36 2v5t_A NCAM2, N-CAM 2, neural 99.0 1.3E-09 4.5E-14 54.7 6.5 53 3-56 90-142 (189)
37 2lu7_A Obscurin-like protein 1 99.0 3.9E-10 1.3E-14 51.3 4.1 43 18-62 3-45 (84)
38 1rhf_A Tyrosine-protein kinase 99.0 3E-09 1E-13 53.3 7.5 49 2-53 91-140 (182)
39 2a38_A Titin; Z1Z2, structural 99.0 2.9E-09 9.9E-14 53.7 7.5 52 3-57 94-148 (194)
40 3qs7_E FL cytokine receptor; i 99.0 1.3E-09 4.4E-14 61.6 6.7 54 2-56 317-370 (423)
41 2iep_A Muscle-specific kinase 99.0 1.8E-09 6.2E-14 54.3 6.5 52 2-56 93-144 (192)
42 2v5m_A Dscam; neurobiology SPL 99.0 3E-09 1E-13 58.5 7.9 52 2-56 300-351 (388)
43 1nct_A Titin; cell adhesion, g 99.0 2.7E-10 9.3E-15 53.5 3.0 44 8-54 13-56 (106)
44 2e7b_A Obscurin; IG-like domai 99.0 9.2E-10 3.1E-14 51.1 4.5 45 8-56 7-51 (103)
45 1cs6_A Axonin-1; neural cell a 99.0 3.7E-09 1.3E-13 58.1 7.3 52 2-56 287-338 (382)
46 3b43_A Titin; I-SET IG fold, e 99.0 1.9E-09 6.6E-14 62.4 6.4 48 6-56 2-49 (570)
47 2bk8_A Connectin, M1, titin he 99.0 4.6E-09 1.6E-13 48.2 6.6 39 18-57 8-47 (97)
48 2yuz_A Myosin-binding protein 99.0 9.7E-10 3.3E-14 51.2 4.3 45 9-58 7-51 (100)
49 2yd1_A Tyrosine-protein phosph 99.0 6.9E-09 2.4E-13 53.2 7.8 51 2-55 96-153 (212)
50 2j8h_A Titin, connectin; cardi 99.0 7.4E-09 2.5E-13 52.3 7.8 55 2-57 92-149 (197)
51 2ckn_A Basic fibroblast growth 99.0 1.2E-09 4.1E-14 50.2 4.3 43 9-55 9-51 (95)
52 3lcy_A Titin; A-BAND, IG tande 99.0 4.5E-09 1.5E-13 52.9 6.8 47 7-56 5-51 (197)
53 3laf_A Deleted in colorectal c 99.0 3.3E-09 1.1E-13 58.5 6.7 51 2-55 305-355 (403)
54 3caf_A Fibroblast growth facto 99.0 2E-09 6.9E-14 49.6 5.0 46 9-55 4-51 (100)
55 3qr2_A Basigin; CD147, EMMPRIN 99.0 1.8E-09 6.3E-14 52.5 5.0 43 6-51 18-60 (137)
56 2cry_A KIN of IRRE-like protei 99.0 9.2E-11 3.1E-15 56.1 0.3 50 2-55 7-57 (122)
57 2v5m_A Dscam; neurobiology SPL 99.0 2E-09 6.8E-14 59.2 5.7 47 8-55 2-48 (388)
58 1qz1_A Neural cell adhesion mo 98.9 7.7E-09 2.6E-13 54.9 7.5 52 3-55 188-239 (291)
59 3p3y_A Neurofascin; IG domains 98.9 1.8E-09 6.2E-14 59.5 5.2 50 2-54 305-354 (404)
60 2yd1_A Tyrosine-protein phosph 98.9 7E-09 2.4E-13 53.2 7.0 44 8-54 5-48 (212)
61 1z7z_I Intercellular adhesion 98.9 3.3E-10 1.1E-14 63.5 2.2 51 2-53 361-411 (450)
62 2edh_A Obscurin; structural ge 98.9 1.1E-09 3.7E-14 51.7 3.7 51 2-57 11-62 (113)
63 2wim_A N-CAM 2, NCAM2, neural 98.9 1.7E-09 6E-14 57.4 4.8 53 3-56 186-238 (291)
64 3lcy_A Titin; A-BAND, IG tande 98.9 1.5E-08 5.1E-13 51.0 8.1 55 2-57 93-148 (197)
65 1wwc_A Protein (NT-3 growth fa 98.9 1.1E-09 3.8E-14 52.1 3.7 49 3-57 2-50 (118)
66 2v9r_A Roundabout homolog 1; p 98.9 2.8E-09 9.4E-14 54.3 5.2 50 2-54 1-51 (212)
67 2yd6_A PTPRD protein; hydrolas 98.9 3.3E-09 1.1E-13 54.5 5.5 46 6-54 3-48 (212)
68 2dlt_A Myosin binding protein 98.9 2E-09 6.7E-14 50.3 4.2 46 8-57 7-52 (106)
69 2va4_A NCAM2, N-CAM 2, neural 98.9 4.8E-09 1.6E-13 52.7 5.8 47 9-56 2-48 (192)
70 1bih_A Hemolin; insect immunit 98.9 3.9E-09 1.3E-13 58.1 5.6 50 2-54 301-351 (395)
71 3kld_A Contactin 4, axcam, BIG 98.9 2.2E-09 7.5E-14 59.5 4.6 44 9-55 5-51 (384)
72 2jll_A NCAM2, neural cell adhe 98.9 5.5E-09 1.9E-13 57.5 6.1 51 2-55 93-143 (389)
73 2j8h_A Titin, connectin; cardi 98.9 1E-08 3.6E-13 51.8 6.7 45 8-55 3-47 (197)
74 1bih_A Hemolin; insect immunit 98.9 4.9E-09 1.7E-13 57.7 5.8 50 4-56 1-51 (395)
75 2edf_A Obscurin; beta-sandwich 98.9 2.6E-09 8.8E-14 49.6 4.0 45 8-56 7-51 (103)
76 2oz4_A Intercellular adhesion 98.9 2.4E-09 8.2E-14 56.6 4.3 48 3-51 177-224 (265)
77 2rik_A Titin; I-SET IG fold, p 98.9 3.5E-08 1.2E-12 52.3 8.7 52 2-55 91-142 (284)
78 2edk_A Myosin-binding protein 98.9 1.8E-09 6.2E-14 50.0 3.3 45 8-56 7-51 (101)
79 3b5h_A Cervical EMMPRIN, HAB18 98.9 9.5E-09 3.2E-13 51.6 6.0 44 2-47 76-120 (184)
80 2iep_A Muscle-specific kinase 98.9 4E-09 1.4E-13 53.1 4.7 46 7-55 5-50 (192)
81 3k0w_A Mucosa-associated lymph 98.9 3.8E-08 1.3E-12 50.8 8.4 44 10-56 119-162 (218)
82 1dr9_A B7-1 (CD80), T lymphocy 98.9 1.2E-08 4.1E-13 51.9 6.4 31 24-55 119-150 (201)
83 3qs9_E FL cytokine receptor; i 98.9 9.3E-09 3.2E-13 59.5 6.5 54 2-56 317-370 (527)
84 2e6q_A Obscurin-like protein 1 98.9 5.5E-09 1.9E-13 49.9 4.7 44 9-57 8-51 (112)
85 2e6p_A Obscurin-like protein 1 98.9 2.1E-09 7.2E-14 49.9 3.2 45 8-56 6-53 (104)
86 2vr9_A Roundabout 1, ROBO; imm 98.9 9.5E-09 3.3E-13 52.7 5.9 45 8-55 8-52 (217)
87 2yd6_A PTPRD protein; hydrolas 98.9 1.9E-08 6.5E-13 51.6 7.0 50 3-55 95-151 (212)
88 2k1m_A Myosin-binding protein 98.9 7E-09 2.4E-13 47.6 4.8 44 10-57 9-52 (95)
89 1gxe_A Myosin binding protein 98.9 1.5E-09 5E-14 53.6 2.6 32 18-50 25-56 (139)
90 2dku_A KIAA1556 protein; beta- 98.8 5.3E-09 1.8E-13 48.5 4.3 45 8-56 7-51 (103)
91 2yuv_A Myosin-binding protein 98.8 1.3E-08 4.3E-13 47.1 5.5 47 8-57 6-52 (100)
92 1pd6_A Cardiac MYBP-C;, myosin 98.8 6.7E-09 2.3E-13 48.7 4.5 46 8-56 14-59 (104)
93 2nzi_A Titin; IG-domain, FNIII 98.8 1.9E-08 6.5E-13 53.8 6.8 45 8-55 3-47 (305)
94 2eny_A Obscurin; beta-sandwich 98.8 1.9E-09 6.5E-14 50.5 2.5 50 6-58 4-55 (104)
95 2ec8_A MAST/stem cell growth f 98.8 2.8E-08 9.6E-13 56.8 7.7 55 2-57 303-359 (524)
96 1qz1_A Neural cell adhesion mo 98.8 2.1E-08 7E-13 53.3 6.7 48 3-53 94-141 (291)
97 1x44_A Myosin-binding protein 98.8 5.4E-09 1.8E-13 48.6 4.0 43 11-57 9-51 (103)
98 2ens_A Advanced glycosylation 98.8 1.5E-09 5E-14 49.9 2.0 43 9-54 10-52 (96)
99 3cx2_A Myosin-binding protein 98.8 9.3E-09 3.2E-13 48.2 4.7 38 10-50 5-45 (108)
100 1he7_A High affinity nerve gro 98.8 1.2E-08 4.1E-13 49.7 4.8 33 25-58 14-46 (126)
101 4f80_A Butyrophilin subfamily 98.8 9.2E-09 3.1E-13 53.3 4.7 50 3-54 112-162 (226)
102 2r15_A Myomesin-1; sarcomeric 98.8 4.5E-08 1.5E-12 49.9 7.2 48 9-58 116-163 (212)
103 3dmk_A DOWN syndrome cell adhe 98.8 1.2E-08 4.1E-13 60.8 5.3 46 9-55 38-83 (816)
104 2yd9_A Receptor-type tyrosine- 98.8 2.6E-08 8.9E-13 53.4 6.1 45 7-54 4-48 (304)
105 3rbs_A Myomesin-1; immunoglobu 98.8 3.3E-08 1.1E-12 51.1 6.1 43 9-55 117-160 (207)
106 3mtr_A N-CAM-1, NCAM-1, neural 98.8 2.4E-08 8.4E-13 51.3 5.5 45 8-56 18-62 (215)
107 2a38_A Titin; Z1Z2, structural 98.8 3.6E-08 1.2E-12 49.6 6.1 44 8-54 4-47 (194)
108 2yd9_A Receptor-type tyrosine- 98.8 2.8E-08 9.7E-13 53.3 6.0 50 2-54 195-247 (304)
109 2v9r_A Roundabout homolog 1; p 98.7 7.8E-08 2.7E-12 48.9 6.9 51 3-56 104-156 (212)
110 4fqp_A Poliovirus receptor; im 98.7 1.4E-08 4.9E-13 54.7 4.2 49 3-53 210-259 (313)
111 2rgs_A I, IG gamma-2B heavy ch 98.7 1E-08 3.4E-13 53.2 3.3 46 6-54 114-161 (218)
112 1cs6_A Axonin-1; neural cell a 98.7 2.3E-08 8E-13 54.9 4.8 45 8-55 3-50 (382)
113 1f97_A Junction adhesion molec 98.7 2.3E-08 7.7E-13 50.8 4.5 50 2-54 97-148 (212)
114 2dm7_A KIAA1556 protein; beta- 98.7 1.7E-08 6E-13 47.1 3.7 44 8-56 7-50 (108)
115 2c5d_C AXL oncogene, tyrosine- 98.7 4.7E-08 1.6E-12 49.4 5.4 44 9-55 2-46 (195)
116 1rhf_A Tyrosine-protein kinase 98.7 3.5E-08 1.2E-12 49.3 4.9 44 9-55 2-45 (182)
117 2vr9_A Roundabout 1, ROBO; imm 98.7 7.2E-08 2.5E-12 49.4 6.1 49 3-54 101-151 (217)
118 2nzi_A Titin; IG-domain, FNIII 98.7 9.3E-08 3.2E-12 51.1 6.6 54 2-56 92-148 (305)
119 3m45_A Cell adhesion molecule 98.7 5.6E-08 1.9E-12 45.0 5.0 41 6-48 3-43 (108)
120 2v5t_A NCAM2, N-CAM 2, neural 98.7 9.4E-08 3.2E-12 47.8 5.9 43 9-54 2-44 (189)
121 3s96_B 3B5H10 FAB light chain; 98.7 4E-08 1.4E-12 50.3 4.6 50 3-55 111-166 (218)
122 1itb_B Type 1 interleukin-1 re 98.7 2E-07 7E-12 50.0 7.5 46 8-55 207-252 (315)
123 2wng_A Tyrosine-protein phosph 98.7 6E-08 2E-12 52.5 5.3 49 2-54 109-161 (327)
124 3laf_A Deleted in colorectal c 98.7 2.8E-07 9.6E-12 50.8 8.1 53 2-57 208-266 (403)
125 3so5_A LIG-3, leucine-rich rep 98.7 1.5E-07 5E-12 43.6 6.0 44 7-53 8-53 (112)
126 1nbq_A JAM, junctional adhesio 98.7 2.2E-08 7.6E-13 50.8 3.4 50 3-55 101-151 (209)
127 1e07_A Carcinoembryonic antige 98.7 9.9E-08 3.4E-12 55.7 6.5 51 2-55 551-602 (642)
128 2va4_A NCAM2, N-CAM 2, neural 98.7 1.9E-07 6.6E-12 46.8 6.8 44 2-48 88-131 (192)
129 2y25_A Myomesin; structural pr 98.7 1.4E-07 4.8E-12 50.5 6.6 47 9-57 221-267 (317)
130 2cpc_A KIAA0657 protein; immun 98.6 7E-08 2.4E-12 45.3 4.7 50 6-57 7-57 (113)
131 1gl4_B Basement membrane-speci 98.6 1.3E-07 4.4E-12 43.3 5.5 31 18-48 17-48 (98)
132 3jz7_A MCAR, CAR, coxsackievir 98.6 1E-08 3.5E-13 52.1 1.8 45 2-48 114-159 (214)
133 3ejj_X Macrophage colony-stimu 98.6 2.6E-07 8.7E-12 49.0 7.3 50 2-54 175-229 (289)
134 3v2a_R Vascular endothelial gr 98.6 3.3E-09 1.1E-13 62.5 0.0 51 3-56 658-710 (772)
135 2pet_A Lutheran blood group gl 98.6 1.8E-07 6.2E-12 48.1 6.6 52 2-56 108-164 (231)
136 2wim_A N-CAM 2, NCAM2, neural 98.6 1E-07 3.4E-12 50.6 5.7 49 3-54 92-140 (291)
137 3mj8_L Stimulatory hamster ant 98.6 3.5E-08 1.2E-12 50.5 3.7 50 2-54 103-158 (213)
138 2dav_A SLOW MYBP-C, myosin-bin 98.6 7.3E-08 2.5E-12 46.9 4.3 35 11-47 9-46 (126)
139 2wng_A Tyrosine-protein phosph 98.6 3.9E-08 1.3E-12 53.2 3.6 45 6-55 219-265 (327)
140 3r4d_A CEA-related cell adhesi 98.6 2.2E-07 7.4E-12 47.2 6.2 48 3-56 103-153 (208)
141 4i0k_A CD276 antigen; immunogl 98.6 9E-08 3.1E-12 49.2 4.8 47 4-53 103-153 (222)
142 3nl4_L Antigen binding fragmen 98.6 9.9E-08 3.4E-12 48.8 4.9 49 3-54 105-157 (213)
143 1z7z_I Intercellular adhesion 98.6 2.7E-07 9.1E-12 51.8 6.8 52 2-55 78-132 (450)
144 3r06_A Anti-mouse CD3epsilon a 98.6 7.7E-08 2.6E-12 49.2 4.3 49 3-54 103-156 (213)
145 2vol_A Murine IGG FC; FC, zinc 98.6 3.1E-08 1.1E-12 50.9 2.7 46 6-54 106-153 (207)
146 3rbs_A Myomesin-1; immunoglobu 98.6 1.5E-07 5E-12 48.7 5.2 49 9-61 3-52 (207)
147 3uto_A Twitchin; kinase, muscl 98.6 3.1E-07 1.1E-11 53.9 7.1 48 8-58 481-528 (573)
148 2jll_A NCAM2, neural cell adhe 98.6 6.3E-07 2.1E-11 49.3 7.8 42 9-54 1-44 (389)
149 2o26_X MAST/stem cell growth f 98.6 2.1E-07 7.3E-12 49.5 5.8 48 2-52 177-229 (290)
150 2fbo_J V1V2;, variable region- 98.6 4.6E-08 1.6E-12 50.9 3.0 49 3-53 126-177 (250)
151 1lk2_B Beta-2-microglobulin; c 98.6 2.4E-07 8E-12 43.2 5.1 43 8-54 3-47 (99)
152 3u83_A Poliovirus receptor-rel 98.6 8.2E-08 2.8E-12 51.8 4.0 50 2-53 224-274 (331)
153 3dmk_A DOWN syndrome cell adhe 98.6 4E-07 1.4E-11 54.4 7.2 50 3-55 337-386 (816)
154 3tv3_L PGT128 light chain, IG 98.6 1.1E-07 3.7E-12 48.6 4.2 50 2-54 100-155 (211)
155 3ojm_B Fibroblast growth facto 98.5 1E-07 3.6E-12 48.9 4.1 47 8-55 14-62 (231)
156 2cr3_A Basic fibroblast growth 98.5 5.8E-08 2E-12 44.8 2.8 36 18-55 10-45 (99)
157 3k0w_A Mucosa-associated lymph 98.5 2.4E-07 8.2E-12 47.8 5.4 44 8-54 17-60 (218)
158 3s97_C Contactin-1; carbonic a 98.5 2.4E-07 8.1E-12 46.7 5.0 43 9-54 113-155 (201)
159 1epf_A NCAM, protein (neural c 98.5 6.8E-07 2.3E-11 44.8 6.7 43 10-54 3-46 (191)
160 2xzc_L FAB A.17 light chain; i 98.5 9.5E-08 3.2E-12 49.1 3.5 49 3-54 105-158 (216)
161 2ifg_A High affinity nerve gro 98.5 1E-07 3.5E-12 52.3 3.8 46 3-55 244-289 (347)
162 2y25_A Myomesin; structural pr 98.5 3E-07 1E-11 49.2 5.5 45 8-56 6-51 (317)
163 3oq3_B IFN-alpha/beta binding 98.5 1.6E-06 5.5E-11 47.1 8.2 47 2-52 218-272 (329)
164 1vca_A VCAM-D1,2, human vascul 98.5 3.7E-07 1.3E-11 46.9 5.4 50 2-54 84-136 (202)
165 1k5n_B Beta-2-microglobulin, l 98.5 2.3E-07 7.7E-12 43.4 4.2 42 8-53 4-47 (100)
166 3d9a_L Light chain of hyhel10 98.5 1.4E-07 4.9E-12 48.2 3.8 50 3-55 103-157 (213)
167 3sgj_C Human FCG3A receptor; r 98.5 1E-06 3.4E-11 45.3 6.9 49 2-54 82-131 (204)
168 3ry4_A Low affinity immunoglob 98.5 1.3E-06 4.3E-11 43.2 7.0 49 2-54 79-128 (170)
169 2wv3_A Neuroplastin; igcam, me 98.5 4.1E-07 1.4E-11 45.8 5.3 44 7-54 1-47 (190)
170 2id5_A Lingo-1, leucine rich r 98.5 1.9E-07 6.4E-12 53.1 4.3 35 18-53 392-426 (477)
171 1bii_B Beta-2 microglobulin, M 98.5 5.5E-07 1.9E-11 43.4 5.4 42 8-53 23-66 (119)
172 1lk3_L 9D7 light chain; antige 98.5 1.7E-07 5.8E-12 47.9 3.8 49 3-54 102-155 (210)
173 3bp6_B Programmed cell death 1 98.5 3.9E-07 1.3E-11 46.3 5.0 29 22-51 114-142 (202)
174 2d3v_A Leukocyte immunoglobuli 98.5 3.3E-07 1.1E-11 46.5 4.7 47 2-53 90-139 (196)
175 1l6x_A Immunoglobulin gamma-1 98.5 1.8E-07 6.2E-12 48.0 3.8 45 7-54 107-153 (207)
176 1e07_A Carcinoembryonic antige 98.5 5E-07 1.7E-11 52.7 5.9 51 2-54 373-423 (642)
177 1c1e_H Catalytic antibody 1E9 98.5 2.7E-07 9.3E-12 47.4 4.3 47 3-52 114-166 (219)
178 1q0x_L FAB 9B1, light chain; a 98.5 3.8E-07 1.3E-11 46.6 4.8 49 3-54 105-159 (212)
179 3rjd_A High affinity immunoglo 98.5 6.4E-07 2.2E-11 46.8 5.7 45 9-56 1-46 (262)
180 2rcj_C Light chain; immunoglob 98.5 4.1E-07 1.4E-11 52.0 5.3 45 7-54 423-469 (523)
181 3mjg_X Beta-type platelet-deri 98.5 3.2E-07 1.1E-11 48.7 4.6 42 4-47 174-217 (289)
182 2eo1_A OBSCN protein, cDNA FLJ 98.4 2.8E-07 9.7E-12 42.5 3.8 36 19-56 19-54 (102)
183 4fom_A Poliovirus receptor-rel 98.4 4.3E-08 1.5E-12 52.6 1.1 49 3-53 205-254 (308)
184 3sob_L Antibody light chain; b 98.4 1.4E-07 4.6E-12 48.9 2.8 49 3-54 126-179 (237)
185 2rcj_C Light chain; immunoglob 98.4 5E-07 1.7E-11 51.6 5.3 49 3-54 104-158 (523)
186 1fnl_A Low affinity immunoglob 98.4 1.1E-06 3.9E-11 43.8 5.9 46 8-56 6-52 (175)
187 3grw_A Fibroblast growth facto 98.4 5.6E-07 1.9E-11 46.6 4.9 46 8-54 10-57 (241)
188 1fnl_A Low affinity immunoglob 98.4 2.2E-06 7.5E-11 42.8 6.8 49 2-54 82-131 (175)
189 3gbl_A BETA2-microglobulin; im 98.4 2.2E-07 7.4E-12 43.3 2.9 28 25-53 17-46 (97)
190 2o26_X MAST/stem cell growth f 98.4 4.9E-07 1.7E-11 48.1 4.5 50 2-54 84-134 (290)
191 1bec_A 14.3.D T cell antigen r 98.4 2.1E-07 7.3E-12 48.6 3.1 50 3-54 108-165 (238)
192 1gsm_A Madcam-1, mucosal addre 98.4 8.8E-07 3E-11 46.4 5.4 48 2-54 89-141 (210)
193 2edn_A Myosin-binding protein 98.4 1.2E-07 4.2E-12 45.7 1.9 35 11-47 14-51 (118)
194 3pv7_A B7-H6, IG-like domain-c 98.4 1.1E-06 3.9E-11 45.8 5.6 46 2-51 112-159 (248)
195 1i1c_A IGG2A, IG gamma-2A chai 98.4 2.7E-07 9.4E-12 48.6 3.2 45 7-54 121-167 (239)
196 4hwu_A Fibroblast growth facto 98.4 1.1E-06 3.7E-11 40.0 4.8 36 18-56 8-43 (95)
197 1nqb_A Single-chain antibody f 98.4 1.2E-06 4.2E-11 46.3 5.6 44 3-48 115-163 (256)
198 3sgj_C Human FCG3A receptor; r 98.4 1.5E-06 5.1E-11 44.7 5.8 46 8-56 6-52 (204)
199 4frw_A Poliovirus receptor-rel 98.4 2.6E-06 8.8E-11 43.1 6.6 36 18-54 125-160 (218)
200 3p3y_A Neurofascin; IG domains 98.4 7.9E-07 2.7E-11 49.0 5.0 45 3-48 109-154 (404)
201 2y23_A Myomesin; structural pr 98.4 2E-06 6.8E-11 45.9 6.4 44 9-56 222-266 (312)
202 2aty_A Complement receptor chi 98.4 3.5E-07 1.2E-11 51.0 3.5 45 6-53 271-317 (376)
203 1f2q_A High affinity immunoglo 98.4 3.4E-07 1.2E-11 45.7 3.2 46 7-55 2-48 (176)
204 1nfd_E H57 FAB; complex (immun 98.4 3.2E-07 1.1E-11 46.9 3.1 50 3-55 103-158 (212)
205 1f2q_A High affinity immunoglo 98.4 1.7E-06 5.9E-11 43.1 5.7 49 2-54 79-128 (176)
206 1pz5_B Heavy chain of FAB (SYA 98.4 8.3E-07 2.8E-11 45.7 4.6 46 3-51 115-166 (220)
207 3rbg_A Cytotoxic and regulator 98.4 8.8E-07 3E-11 42.3 4.4 36 18-53 8-43 (124)
208 3r08_E T-cell surface glycopro 98.4 3.8E-07 1.3E-11 41.4 2.9 34 18-54 6-39 (82)
209 3u83_A Poliovirus receptor-rel 98.3 4.9E-06 1.7E-10 44.9 7.7 47 2-48 123-173 (331)
210 3oq3_B IFN-alpha/beta binding 98.3 3E-07 1E-11 50.0 3.0 32 22-54 139-171 (329)
211 3o3u_N Maltose-binding peripla 98.3 2.9E-06 9.9E-11 49.1 7.1 50 2-56 463-517 (581)
212 2ocw_A Polymeric-immunoglobuli 98.3 1.4E-06 4.9E-11 50.3 5.8 50 2-54 435-488 (585)
213 1q9r_B S25-2 FAB (IGG1K) heavy 98.3 6.8E-07 2.3E-11 46.1 4.1 47 3-52 117-169 (222)
214 2p1y_A Bispecific alpha/beta T 98.3 1.7E-06 5.9E-11 44.9 5.6 31 18-48 134-164 (238)
215 1hng_A CD2; T lymphocyte adhes 98.3 2.7E-06 9.4E-11 42.8 6.2 32 26-58 110-141 (176)
216 3umt_A SCFV heavy chain and li 98.3 1.9E-06 6.4E-11 45.4 5.8 37 9-47 138-174 (256)
217 3p73_B Beta-2-microglobulin; I 98.3 6.1E-07 2.1E-11 41.9 3.5 28 25-53 17-46 (99)
218 1op3_H FAB 2G12, heavy chain; 98.3 6.8E-07 2.3E-11 46.3 4.0 47 3-52 118-170 (225)
219 1ow0_A IG alpha-1 chain C regi 98.3 2.5E-07 8.5E-12 47.8 2.2 47 7-55 104-152 (214)
220 3qs7_E FL cytokine receptor; i 98.3 8.5E-07 2.9E-11 50.1 4.5 46 3-53 223-269 (423)
221 1ugn_A LIR1, leukocyte immunog 98.3 2.8E-06 9.7E-11 43.1 6.1 47 2-53 91-140 (198)
222 4acp_A IG gamma-1 chain C regi 98.3 3.1E-07 1.1E-11 48.7 2.4 43 8-53 129-173 (240)
223 2fbj_H IGA-kappa J539 FAB (hea 98.3 1.3E-06 4.4E-11 45.2 4.6 47 3-53 113-166 (220)
224 3bqu_C 3H6 FAB light chain; be 98.3 3.5E-07 1.2E-11 47.4 2.5 49 3-54 125-178 (233)
225 2ny1_B T-cell surface glycopro 98.3 6.5E-06 2.2E-10 41.2 7.1 32 21-53 107-138 (184)
226 3ry4_A Low affinity immunoglob 98.3 1.7E-06 6E-11 42.7 4.9 43 10-55 5-48 (170)
227 1dee_B IGM RF 2A2; FAB-IBP com 98.3 2.1E-06 7.1E-11 44.5 5.3 49 3-53 116-170 (223)
228 1hzh_H IGG, immunoglobulin hea 98.3 5.5E-07 1.9E-11 50.8 3.3 45 7-54 353-399 (457)
229 3bkj_L WO2 IGG2A FAB fragment 98.3 5.6E-07 1.9E-11 47.3 3.2 49 3-54 141-194 (252)
230 3jts_B Beta-2-microglobulin; a 98.3 1.2E-06 4.1E-11 42.2 4.0 42 8-53 23-66 (119)
231 2c1o_A IGK-C protein; FAB frag 98.3 7.4E-07 2.5E-11 46.7 3.6 50 3-55 145-199 (254)
232 3grw_A Fibroblast growth facto 98.3 6E-06 2E-10 42.7 7.0 30 18-47 121-150 (241)
233 2ghw_B Anti-SARS SCFV antibody 98.3 2.8E-06 9.5E-11 44.4 5.7 30 18-47 142-171 (247)
234 4dzb_B Vbeta2 (MAIT T cell rec 98.3 1.3E-06 4.4E-11 45.6 4.4 51 3-55 112-170 (246)
235 2v44_A NCAM2, neural cell adhe 98.3 5.6E-06 1.9E-10 41.4 6.6 36 18-54 9-44 (189)
236 2ec8_A MAST/stem cell growth f 98.3 3.3E-06 1.1E-10 48.3 6.4 48 2-52 200-252 (524)
237 3ojm_B Fibroblast growth facto 98.3 7.2E-06 2.5E-10 42.0 7.0 44 3-47 107-154 (231)
238 1c5d_H Monoclonal antibody aga 98.3 1.2E-06 3.9E-11 45.2 3.9 48 2-52 111-164 (215)
239 3o4o_C Interleukin-1 receptor 98.3 3.7E-07 1.3E-11 49.5 2.0 54 2-56 111-169 (339)
240 3d9a_H Heavy chain of hyhel10 98.3 1.5E-06 5.2E-11 44.4 4.2 47 3-52 108-160 (210)
241 3o81_A Beta-2-microglobulin; I 98.3 7.5E-07 2.6E-11 42.9 2.9 42 8-53 23-66 (119)
242 3s97_C Contactin-1; carbonic a 98.3 1.2E-06 4E-11 44.1 3.7 35 18-53 15-51 (201)
243 2y23_A Myomesin; structural pr 98.3 4E-06 1.4E-10 44.7 6.0 48 9-58 106-154 (312)
244 1oga_E TRBC1, T-cell receptor 98.3 7.8E-07 2.7E-11 46.9 3.1 44 9-54 122-167 (252)
245 2if7_A SLAM family member 6; N 98.2 7.7E-06 2.6E-10 41.6 6.7 30 25-55 122-153 (193)
246 1f97_A Junction adhesion molec 98.2 1.8E-06 6.1E-11 43.7 4.3 31 18-48 8-38 (212)
247 3bae_H WO2 IGG2A FAB fragment 98.2 3.3E-06 1.1E-10 43.8 5.4 47 2-51 119-171 (228)
248 3bn9_D E2 FAB heavy chain; ant 98.2 6.6E-07 2.3E-11 47.7 2.7 47 3-52 123-175 (257)
249 3pl6_D MBP peptide / T-cell re 98.2 2E-06 6.7E-11 45.5 4.5 50 3-54 133-190 (268)
250 2gi7_A GPVI protein; IG-like d 98.2 5.6E-06 1.9E-10 41.7 6.0 41 7-52 6-46 (184)
251 3qib_D 2B4 beta chain; IG doma 98.2 1.5E-06 5E-11 46.1 3.9 50 3-54 136-193 (270)
252 1jhl_L IGG1-kappa D11.15 FV (l 98.2 3.2E-06 1.1E-10 39.4 4.6 31 18-48 8-38 (108)
253 3qs9_E FL cytokine receptor; i 98.2 1.8E-06 6.1E-11 50.1 4.4 46 3-53 223-269 (527)
254 1iam_A ICAM-1, CD54, intercell 98.2 6.6E-06 2.2E-10 42.4 6.0 50 3-54 79-131 (185)
255 1ry7_B FGFR-3, fibroblast grow 98.2 1.4E-06 4.9E-11 47.1 3.8 45 3-48 211-259 (334)
256 1uct_A Immunoglobulin alpha FC 98.2 3.8E-06 1.3E-10 43.6 5.2 47 3-53 97-146 (218)
257 3rjd_A High affinity immunoglo 98.2 6.2E-06 2.1E-10 43.0 6.1 50 2-55 76-126 (262)
258 4dep_C Interleukin-1 receptor 98.2 9.9E-07 3.4E-11 48.0 3.1 46 9-55 224-273 (349)
259 3s35_X Vascular endothelial gr 98.2 5.7E-06 2E-10 39.1 5.4 33 18-51 15-49 (122)
260 3p2t_A Leukocyte immunoglobuli 98.2 2.9E-06 9.9E-11 43.0 4.6 41 8-53 4-44 (196)
261 3zyj_A Leucine-rich repeat-con 98.2 5.6E-06 1.9E-10 46.8 6.0 43 9-54 341-383 (440)
262 3q5y_A TCR N15 beta; IG, T cel 98.2 2.7E-06 9.1E-11 44.3 4.4 50 3-54 109-166 (240)
263 1dn0_B IGM-kappa cold agglutin 98.2 1.1E-05 3.6E-10 42.1 6.6 49 3-53 115-170 (232)
264 4ei6_B Vbeta16 XV19 type II na 98.2 3E-06 1E-10 44.2 4.4 51 3-55 111-169 (245)
265 1nkr_A P58-CL42 KIR; inhibitor 98.2 9.3E-06 3.2E-10 41.3 6.2 46 3-53 99-147 (201)
266 1igt_B IGG2A intact antibody - 98.2 1.3E-06 4.4E-11 49.1 3.2 44 7-53 344-389 (444)
267 3eow_R Poliovirus receptor; im 98.2 5.4E-07 1.8E-11 46.4 1.5 42 3-47 110-153 (221)
268 3juy_B 3B3 single chain varian 98.2 6.8E-06 2.3E-10 43.2 5.8 36 10-47 150-186 (256)
269 1igy_B IGG1 intact antibody MA 98.2 4.8E-07 1.6E-11 50.8 1.3 44 7-53 334-379 (434)
270 2ocw_A Polymeric-immunoglobuli 98.2 9.3E-06 3.2E-10 46.9 6.6 44 2-47 324-371 (585)
271 1qgc_4 Protein (immunoglobulin 98.2 2.7E-06 9.3E-11 47.5 4.1 50 3-55 107-161 (438)
272 3c5j_A HLA class II histocompa 98.2 1.9E-06 6.6E-11 44.0 3.3 45 6-54 83-129 (181)
273 1za6_B IGG heavy chain; immuno 98.2 2.1E-06 7.3E-11 46.9 3.6 47 3-52 110-162 (344)
274 1oll_A NK receptor; immune sys 98.1 8.7E-06 3E-10 41.1 5.5 46 3-53 90-138 (188)
275 3m8o_H Immunoglobulin A1 heavy 98.1 5.8E-06 2E-10 42.6 4.9 29 24-53 136-167 (221)
276 3b5h_A Cervical EMMPRIN, HAB18 98.1 5.4E-06 1.8E-10 41.4 4.7 34 21-55 8-43 (184)
277 4dep_C Interleukin-1 receptor 98.1 4.4E-06 1.5E-10 45.5 4.6 52 2-54 109-167 (349)
278 1uct_A Immunoglobulin alpha FC 98.1 5.9E-07 2E-11 46.7 1.1 42 7-53 7-48 (218)
279 3ejj_X Macrophage colony-stimu 98.1 6.9E-06 2.3E-10 43.5 5.2 51 2-54 81-133 (289)
280 3nl4_L Antigen binding fragmen 98.1 5.4E-06 1.8E-10 42.3 4.6 31 18-48 8-38 (213)
281 4fqp_A Poliovirus receptor; im 98.1 1.1E-05 3.9E-10 43.3 6.0 48 3-53 111-159 (313)
282 1za6_B IGG heavy chain; immuno 98.1 2.3E-06 8E-11 46.8 3.3 44 8-54 241-286 (344)
283 3gkz_A Anti-methamphetamine si 98.1 7.3E-06 2.5E-10 43.1 5.1 36 10-47 142-178 (257)
284 2rgs_A I, IG gamma-2B heavy ch 98.1 3E-06 1E-10 43.8 3.6 44 8-53 8-56 (218)
285 1mju_H Immunoglobulin MS6-12; 98.1 6.3E-06 2.2E-10 42.8 4.8 47 3-52 111-163 (227)
286 1qgc_4 Protein (immunoglobulin 98.1 2.1E-06 7.3E-11 47.9 3.2 48 3-53 333-386 (438)
287 1f3r_B FV antibody fragment; I 98.1 2.9E-06 9.9E-11 44.8 3.5 30 18-47 146-175 (257)
288 3nl4_H Antigen binding fragmen 98.1 1.7E-06 5.7E-11 44.5 2.5 46 3-51 110-161 (215)
289 1vca_A VCAM-D1,2, human vascul 98.1 1E-05 3.4E-10 41.5 5.4 28 21-48 11-38 (202)
290 1hzh_H IGG, immunoglobulin hea 98.1 3.7E-06 1.3E-10 47.5 4.0 46 3-51 122-173 (457)
291 4dkd_C Macrophage colony-stimu 98.1 3.8E-06 1.3E-10 44.5 3.9 50 2-54 81-133 (292)
292 1xau_A B- and T-lymphocyte att 98.1 1.1E-05 3.9E-10 38.6 5.0 35 18-52 21-56 (122)
293 2zg1_A Sialic acid-binding IG- 98.1 5.2E-06 1.8E-10 42.3 4.2 43 3-51 117-166 (214)
294 2ifg_A High affinity nerve gro 98.1 2.6E-06 9E-11 46.7 3.3 40 8-49 157-196 (347)
295 3to4_D NKT vbeta2 (mouse varia 98.1 4.5E-06 1.6E-10 43.9 3.9 29 25-54 138-168 (253)
296 2x1w_L Vascular endothelial gr 98.1 1.7E-05 5.8E-10 40.7 6.0 48 3-52 96-147 (213)
297 4fom_A Poliovirus receptor-rel 98.1 1E-05 3.5E-10 43.3 5.3 50 3-53 106-156 (308)
298 3nfj_J T cell receptor beta ch 98.1 4.6E-06 1.6E-10 43.5 3.9 50 3-54 111-168 (245)
299 1uvq_A HLA class II histocompa 98.1 2.3E-06 7.9E-11 44.4 2.7 46 5-54 85-132 (197)
300 1l6x_A Immunoglobulin gamma-1 98.1 3.8E-06 1.3E-10 43.0 3.5 29 24-53 16-48 (207)
301 2q20_A VK1 O18/O8 germline lig 98.1 1.1E-05 3.9E-10 37.6 4.8 31 18-48 10-40 (109)
302 3r06_A Anti-mouse CD3epsilon a 98.1 8.7E-06 3E-10 41.5 4.8 30 18-47 8-37 (213)
303 2dru_A Chimera of CD48 antigen 98.1 2.1E-05 7.3E-10 39.7 6.2 27 26-54 115-142 (180)
304 2wbj_D OB TCR; transmembrane, 98.1 1.9E-06 6.6E-11 46.0 2.3 30 24-54 163-194 (279)
305 4fmk_A Poliovirus receptor-rel 98.1 1.3E-05 4.4E-10 40.6 5.3 32 21-52 11-45 (225)
306 1hxm_B Gamma-delta T-cell rece 98.1 4.9E-06 1.7E-10 43.6 3.8 28 23-51 144-173 (242)
307 1moe_A Anti-CEA MAB T84.66; an 98.1 1.4E-05 4.8E-10 41.4 5.5 45 2-48 106-158 (240)
308 1qok_A MFE-23 recombinant anti 98.1 1.3E-05 4.6E-10 42.8 5.5 30 18-48 169-198 (282)
309 1cd1_A CD1, MCD1D.1; immunolog 98.1 8.9E-06 3E-10 44.8 4.8 41 8-53 184-226 (315)
310 2d3v_A Leukocyte immunoglobuli 98.1 5.2E-06 1.8E-10 42.1 3.7 41 8-53 4-44 (196)
311 2w59_A IGY FCU3-4; immunoglobu 98.1 5.8E-06 2E-10 43.2 3.9 44 8-53 11-57 (231)
312 1ccz_A Protein (CD58); LFA-3, 98.1 2.7E-05 9.1E-10 39.1 6.2 27 30-57 109-135 (171)
313 3liz_H 4C3 monoclonal antibody 98.1 1.3E-05 4.5E-10 42.2 5.3 46 3-51 114-165 (253)
314 1nbq_A JAM, junctional adhesio 98.0 3.2E-06 1.1E-10 42.7 2.8 38 9-48 4-41 (209)
315 3zyi_A Leucine-rich repeat-con 98.0 5.4E-06 1.8E-10 47.0 3.9 42 9-54 352-393 (452)
316 1nkr_A P58-CL42 KIR; inhibitor 98.0 9.2E-06 3.1E-10 41.4 4.4 41 7-52 6-46 (201)
317 2w59_A IGY FCU3-4; immunoglobu 98.0 1.2E-05 4.3E-10 41.9 5.0 29 26-55 133-163 (231)
318 3c5j_B MHC class II antigen; H 98.0 6.2E-06 2.1E-10 42.3 3.7 44 7-54 94-139 (190)
319 2e27_L Anti-ciguatoxin antibod 98.0 1.4E-05 4.7E-10 38.1 4.6 31 18-48 10-40 (119)
320 1ypz_F T-cell receptor gamma c 98.0 1.3E-06 4.5E-11 45.5 1.0 31 23-53 142-174 (230)
321 4dkd_C Macrophage colony-stimu 98.0 1.7E-05 5.7E-10 42.0 5.3 49 2-53 175-228 (292)
322 1iga_A IGA1; immunoglobulin; N 98.0 8E-06 2.7E-10 46.4 4.2 47 7-55 347-395 (475)
323 3uzq_A Anti-dengue MAB 4E11; d 98.0 1.2E-05 4E-10 42.3 4.6 37 9-47 133-173 (253)
324 1uvq_B HLA class II histocompa 98.0 7.2E-06 2.4E-10 42.3 3.7 43 8-54 93-137 (198)
325 2ywz_A NEW antigen receptor va 98.0 3.1E-05 1E-09 36.3 5.6 31 18-48 7-39 (111)
326 3v2a_R Vascular endothelial gr 98.0 2E-06 6.7E-11 51.0 1.6 52 2-54 320-372 (772)
327 3o4o_C Interleukin-1 receptor 98.0 3.1E-06 1.1E-10 45.9 2.3 47 3-52 215-270 (339)
328 2xqy_G A13-D6.3 monoclonal ant 98.0 1.5E-05 5.3E-10 42.4 4.9 47 3-52 119-171 (261)
329 3d9a_L Light chain of hyhel10 98.0 1.3E-05 4.5E-10 40.8 4.5 31 18-48 8-38 (213)
330 3omz_A Human vdelta1 gamma del 98.0 3.6E-05 1.2E-09 40.5 6.2 37 10-48 137-174 (259)
331 2gi7_A GPVI protein; IG-like d 98.0 1.1E-05 3.9E-10 40.6 4.0 46 3-53 85-133 (184)
332 1sy6_A T-cell surface glycopro 98.0 1.3E-05 4.4E-10 41.2 4.2 28 25-55 127-154 (204)
333 1qfw_M FV, antibody (anti beta 98.0 1.5E-05 5.2E-10 37.1 4.1 31 18-48 8-38 (108)
334 1i8k_A Epidermal growth factor 98.0 1.6E-05 5.6E-10 36.9 4.2 31 18-48 8-38 (107)
335 1ugn_A LIR1, leukocyte immunog 98.0 1.2E-05 4.1E-10 40.7 4.0 41 8-53 4-44 (198)
336 1iak_A MHC class II I-AK; hist 98.0 4.1E-06 1.4E-10 43.5 2.3 45 6-54 87-133 (199)
337 1mqk_L Antibody 7E2 FV fragmen 98.0 1.9E-05 6.6E-10 37.6 4.5 31 18-48 8-38 (120)
338 2gki_A Nuclease; anti-DNA anti 98.0 1.7E-05 5.8E-10 42.7 4.7 31 18-48 166-202 (291)
339 2znx_A SCFV; fluorotryptohpan, 98.0 1.5E-05 5.2E-10 41.7 4.4 28 21-48 132-161 (242)
340 2oz4_A Intercellular adhesion 98.0 5.6E-06 1.9E-10 43.6 2.7 31 22-53 14-47 (265)
341 3esu_F Antibody 14B7* light ch 97.9 2.1E-05 7.1E-10 41.1 4.8 31 18-48 11-41 (250)
342 1z9m_A GAPA225; nectin-like, I 97.9 2E-05 7E-10 38.4 4.5 30 18-47 45-74 (145)
343 3p2t_A Leukocyte immunoglobuli 97.9 5E-05 1.7E-09 38.4 6.0 46 3-53 91-139 (196)
344 3tf7_C 42F3 MUT7 SCFV (42F3 al 97.9 4.1E-05 1.4E-09 40.3 5.8 36 9-47 137-172 (256)
345 3usa_D HLA class II histocompa 97.9 1.5E-05 5.2E-10 41.2 4.0 45 24-69 105-152 (189)
346 2bc4_A HLA class II histocompa 97.9 4.9E-05 1.7E-09 39.7 6.0 43 25-68 113-157 (211)
347 2c1o_A IGK-C protein; FAB frag 97.9 1.9E-05 6.6E-10 41.3 4.5 38 8-47 37-79 (254)
348 1i1r_A GP130, interleukin-6 re 97.9 1.3E-05 4.5E-10 43.2 4.0 36 18-54 11-53 (303)
349 2znx_A SCFV; fluorotryptohpan, 97.9 2.1E-05 7.3E-10 41.1 4.6 31 18-48 8-38 (242)
350 2bc4_B HLA class II histocompa 97.9 2.8E-05 9.7E-10 40.5 5.0 44 7-54 94-139 (211)
351 3omz_A Human vdelta1 gamma del 97.9 1E-05 3.5E-10 42.6 3.3 37 9-47 2-38 (259)
352 1ntl_A CRRY-IG; immunology, co 97.9 1.5E-05 5E-10 46.6 4.2 44 8-54 448-493 (551)
353 3bn3_B ICAM-5, intercellular a 97.9 1.8E-05 6E-10 41.1 4.1 50 3-54 82-134 (196)
354 2wqr_A IG epsilon chain C regi 97.9 7.6E-06 2.6E-10 44.3 2.8 27 27-54 25-53 (323)
355 1lk3_L 9D7 light chain; antige 97.9 1.8E-05 6.1E-10 40.3 4.1 31 18-48 7-37 (210)
356 2ny1_B T-cell surface glycopro 97.9 4.2E-05 1.5E-09 38.2 5.3 31 20-51 4-34 (184)
357 3huj_A R3G1, T-cell surface gl 97.9 3.5E-05 1.2E-09 42.0 5.3 28 26-54 200-229 (284)
358 4acp_A IG gamma-1 chain C regi 97.9 6.3E-06 2.2E-10 43.6 2.3 44 8-53 21-69 (240)
359 3vh8_G Killer cell immunoglobu 97.9 1.9E-05 6.4E-10 42.6 4.2 44 4-52 19-62 (316)
360 2wqr_A IG epsilon chain C regi 97.9 4E-05 1.4E-09 41.5 5.5 29 25-54 233-263 (323)
361 1wio_A CD4, T-cell surface gly 97.9 1.2E-05 4.2E-10 44.1 3.5 35 19-54 184-223 (363)
362 1ry7_B FGFR-3, fibroblast grow 97.9 6.3E-06 2.2E-10 44.5 2.3 34 20-54 132-165 (334)
363 1i1c_A IGG2A, IG gamma-2A chai 97.9 9.8E-06 3.4E-10 42.7 3.0 30 23-53 29-62 (239)
364 1wio_A CD4, T-cell surface gly 97.9 3.4E-05 1.1E-09 42.3 5.2 31 22-53 107-137 (363)
365 1oll_A NK receptor; immune sys 97.9 5.4E-05 1.9E-09 38.1 5.6 41 9-54 4-44 (188)
366 3mj8_L Stimulatory hamster ant 97.9 1.7E-05 5.8E-10 40.4 3.7 28 20-47 9-36 (213)
367 3ux9_B SCFV antibody; five hel 97.9 4.8E-05 1.6E-09 39.9 5.5 29 20-48 143-173 (256)
368 3lqz_A HLA class II histocompa 97.9 1.1E-05 3.8E-10 41.3 2.9 47 4-54 81-129 (181)
369 3s96_B 3B5H10 FAB light chain; 97.9 2.9E-05 9.9E-10 39.6 4.5 28 20-47 9-37 (218)
370 1i3g_L Antibody FV fragment; a 97.9 3.5E-05 1.2E-09 36.1 4.5 31 18-48 11-41 (111)
371 3auv_A SC-DSFV derived from th 97.9 3.5E-05 1.2E-09 41.1 4.8 31 18-48 141-173 (276)
372 1onq_A T-cell surface glycopro 97.9 2.6E-05 8.9E-10 42.4 4.4 28 25-53 198-227 (283)
373 3tf7_C 42F3 MUT7 SCFV (42F3 al 97.9 3.5E-05 1.2E-09 40.6 4.8 30 18-47 10-39 (256)
374 3f8u_B Tapasin; endoplasmic re 97.9 6.4E-05 2.2E-09 42.9 6.0 43 3-47 285-333 (401)
375 3esu_F Antibody 14B7* light ch 97.8 3.2E-05 1.1E-09 40.3 4.5 31 18-48 138-170 (250)
376 2v5y_A Receptor-type tyrosine- 97.8 3.1E-05 1.1E-09 46.2 4.8 44 8-54 164-209 (731)
377 1igy_B IGG1 intact antibody MA 97.8 2.8E-05 9.4E-10 43.7 4.4 46 3-51 109-160 (434)
378 3bp6_B Programmed cell death 1 97.8 3.6E-05 1.2E-09 38.9 4.5 29 19-47 10-43 (202)
379 2j6e_L IGM, FAB light chain; a 97.8 1.7E-06 6E-11 44.7 -0.5 30 24-54 148-179 (234)
380 4g43_A MHC class I alpha chain 97.8 6.6E-05 2.3E-09 40.6 5.6 44 25-69 194-240 (275)
381 2xot_A Amphoterin-induced prot 97.8 1.3E-05 4.4E-10 44.4 2.8 33 18-51 253-285 (361)
382 1itb_B Type 1 interleukin-1 re 97.8 2E-05 7E-10 42.2 3.5 34 21-55 113-152 (315)
383 3auv_A SC-DSFV derived from th 97.8 3.8E-05 1.3E-09 40.9 4.5 38 9-48 12-49 (276)
384 3g08_A T-cell surface glycopro 97.8 2.9E-05 9.8E-10 42.3 4.0 27 26-53 201-229 (285)
385 1mq8_A ICAM-1, intercellular a 97.8 3.9E-05 1.3E-09 41.9 4.5 50 3-54 79-131 (291)
386 3u2s_H PG9 heavy chain; greek 97.8 4.6E-05 1.6E-09 40.3 4.6 28 23-51 153-182 (248)
387 1b6u_A KIR2DL3, P58 killer cel 97.8 5E-05 1.7E-09 40.5 4.8 47 3-54 98-147 (257)
388 2vsd_A CHIR AB1; immune system 97.8 3.6E-05 1.2E-09 35.8 3.8 41 8-53 4-44 (105)
389 3nfj_J T cell receptor beta ch 97.8 7.5E-05 2.6E-09 38.9 5.3 30 18-47 8-37 (245)
390 1ypz_E T cell receptor delta, 97.8 0.00024 8.1E-09 36.5 7.1 25 29-55 135-161 (207)
391 1t7v_A Zinc-alpha-2-glycoprote 97.8 7.3E-05 2.5E-09 40.5 5.3 56 8-69 185-242 (278)
392 3p73_A MHC RFP-Y class I alpha 97.8 4.1E-05 1.4E-09 41.4 4.3 40 8-54 182-223 (275)
393 1igt_B IGG2A intact antibody - 97.8 4E-05 1.4E-09 43.1 4.4 46 3-51 113-164 (444)
394 4dzb_B Vbeta2 (MAIT T cell rec 97.8 4.6E-05 1.6E-09 39.7 4.4 30 18-47 8-37 (246)
395 3tv3_H PGT128 heavy chain, IG 97.8 3.3E-05 1.1E-09 40.4 3.9 28 23-51 152-181 (239)
396 1iga_A IGA1; immunoglobulin; N 97.8 0.0001 3.4E-09 42.0 6.0 27 24-51 139-168 (475)
397 2p1y_A Bispecific alpha/beta T 97.8 6E-05 2.1E-09 39.0 4.8 30 18-48 7-36 (238)
398 2p24_A H-2 class II histocompa 97.8 4.5E-05 1.5E-09 40.5 4.3 29 25-54 133-163 (236)
399 1svz_A Immunoglobulin;, single 97.8 8.4E-05 2.9E-09 38.7 5.3 28 21-48 137-166 (247)
400 3sob_L Antibody light chain; b 97.8 6.3E-05 2.1E-09 38.8 4.7 36 10-47 25-60 (237)
401 4hwn_A FC receptor-like A; FCR 97.8 6.8E-05 2.3E-09 35.1 4.5 43 8-54 7-54 (108)
402 4frw_A Poliovirus receptor-rel 97.8 3.6E-05 1.2E-09 38.8 3.7 30 18-47 6-38 (218)
403 3qhz_H Human monoclonal antibo 97.8 3.5E-05 1.2E-09 40.0 3.7 46 3-51 122-173 (232)
404 2r15_A Myomesin-1; sarcomeric 97.8 3.3E-05 1.1E-09 39.1 3.5 33 24-57 15-48 (212)
405 1s7q_A H-2KB, H-2 class I hist 97.7 4.8E-05 1.6E-09 42.5 4.3 29 25-54 195-225 (348)
406 1jbj_A CD3 epsilon and gamma e 97.7 2.1E-05 7.3E-10 39.7 2.7 28 23-54 119-146 (186)
407 2gjj_A A21 single-chain antibo 97.7 0.00016 5.4E-09 38.4 6.1 28 21-48 148-177 (264)
408 3usa_C HLA class II histocompa 97.7 6.3E-05 2.1E-09 38.7 4.3 30 24-54 98-129 (181)
409 1jbj_A CD3 epsilon and gamma e 97.7 5.6E-05 1.9E-09 38.2 4.2 30 23-55 11-40 (186)
410 2h26_A CD1B antigen, T-cell su 97.7 5.6E-05 1.9E-09 41.1 4.4 28 25-53 198-227 (286)
411 1hnf_A CD2; T lymphocyte adhes 97.7 8.7E-05 3E-09 37.7 4.9 27 26-53 115-141 (182)
412 2qrt_A H-2KB, H-2 class I hist 97.7 4.1E-05 1.4E-09 43.8 3.9 45 6-54 24-70 (422)
413 4fa8_A Secreted protein BARF1; 97.7 1.5E-05 5.1E-10 41.1 2.0 30 20-50 2-34 (203)
414 4f7e_A CD1D antigen, D polypep 97.7 7.1E-05 2.4E-09 40.8 4.7 28 25-53 198-227 (283)
415 3bqu_C 3H6 FAB light chain; be 97.7 2.5E-05 8.6E-10 40.3 2.8 37 10-48 24-60 (233)
416 1sq2_N Novel antigen receptor; 97.7 9.7E-05 3.3E-09 34.7 4.6 31 18-48 7-39 (113)
417 3s6c_A Beta-2-microglobulin, T 97.7 2.3E-05 7.8E-10 44.4 2.7 44 7-54 2-47 (392)
418 3nwm_A Peptide/beta-2microglob 97.7 3.6E-05 1.2E-09 44.3 3.5 45 6-54 27-73 (443)
419 2fbo_J V1V2;, variable region- 97.7 9.8E-05 3.4E-09 38.2 4.9 31 18-48 9-42 (250)
420 4gup_A Major histocompatibilit 97.7 3.7E-05 1.3E-09 41.7 3.4 43 26-69 194-239 (271)
421 3bkj_L WO2 IGG2A FAB fragment 97.7 7.8E-05 2.7E-09 39.1 4.5 38 9-48 34-76 (252)
422 1sy6_A T-cell surface glycopro 97.7 5.3E-05 1.8E-09 38.9 3.7 27 24-54 16-42 (204)
423 3moq_A NEW antigen receptor va 97.7 0.0002 6.9E-09 34.5 5.5 31 18-48 7-39 (126)
424 1x9q_A SCFV, 4M5.3 anti-fluore 97.7 9E-05 3.1E-09 39.3 4.6 30 19-48 159-190 (268)
425 1k5n_A Major histocompatibilit 97.7 8.7E-05 3E-09 40.2 4.6 41 8-54 183-225 (276)
426 3d2u_A UL18 protein; MHC class 97.7 9.4E-05 3.2E-09 40.3 4.7 28 26-54 202-231 (281)
427 1nez_G T-cell surface glycopro 97.7 0.00017 5.9E-09 34.8 5.3 38 9-48 4-41 (128)
428 1p6f_A NKP46, natural cytotoxi 97.7 0.00017 5.7E-09 38.1 5.6 46 3-53 93-141 (242)
429 2yc1_B Single chain antibody f 97.7 0.00013 4.4E-09 36.1 4.8 37 10-48 17-53 (146)
430 2ptt_A CD48 antigen; CD244, CD 97.7 7.4E-05 2.5E-09 34.7 3.8 34 18-51 10-44 (110)
431 2x1w_L Vascular endothelial gr 97.7 5.6E-05 1.9E-09 38.7 3.6 35 18-53 14-52 (213)
432 1moe_A Anti-CEA MAB T84.66; an 97.7 5.4E-05 1.8E-09 39.2 3.6 31 18-48 8-42 (240)
433 1olz_A Semaphorin 4D; developm 97.7 2.8E-05 9.7E-10 46.7 2.8 35 19-55 541-575 (663)
434 1zvo_C Myeloma immunoglobulin 97.7 9E-05 3.1E-09 42.8 4.7 45 8-54 295-341 (512)
435 3m17_A IGG receptor FCRN large 97.7 0.00032 1.1E-08 37.8 6.6 42 26-69 191-234 (267)
436 1h5b_A Murine T cell receptor 97.7 0.00014 4.8E-09 34.0 4.7 30 18-48 8-37 (113)
437 2coq_A NEW antigen receptor va 97.7 8.6E-05 2.9E-09 34.5 3.9 31 18-48 7-39 (108)
438 1hng_A CD2; T lymphocyte adhes 97.6 6.2E-05 2.1E-09 37.8 3.6 33 20-53 5-39 (176)
439 2yz1_A Tyrosine-protein phosph 97.6 0.00011 3.8E-09 34.6 4.2 32 18-49 14-46 (120)
440 2vol_A Murine IGG FC; FC, zinc 97.6 7.2E-05 2.5E-09 38.3 3.8 30 23-53 15-48 (207)
441 4aen_A HLA class II histocompa 97.6 4.6E-05 1.6E-09 39.9 3.0 46 5-54 97-144 (207)
442 1mhc_A MHC class I antigen H2- 97.6 9.7E-05 3.3E-09 40.1 4.2 29 25-54 195-225 (282)
443 1svz_A Immunoglobulin;, single 97.6 0.00012 3.9E-09 38.2 4.4 31 18-48 8-43 (247)
444 1zs8_A Histocompatibility 2, M 97.6 7.3E-05 2.5E-09 40.4 3.7 29 25-54 194-224 (274)
445 1u58_A MHC-I homolog M144; MCM 97.6 0.00016 5.5E-09 38.8 4.9 43 26-69 158-207 (253)
446 4ah2_B HLA class II histocompa 97.6 0.00012 4.1E-09 38.8 4.3 28 26-54 141-170 (229)
447 2jju_A Signal regulatory prote 97.6 0.0001 3.6E-09 35.2 3.8 32 18-49 10-42 (127)
448 3bev_A Major histocompatibilit 97.6 0.00018 6E-09 38.9 5.0 42 26-69 193-237 (274)
449 2ghw_B Anti-SARS SCFV antibody 97.6 0.00014 4.9E-09 37.8 4.6 28 20-47 11-40 (247)
450 1r3h_A MHC H2-TL-T10-129; clas 97.6 9.4E-05 3.2E-09 39.7 3.9 41 8-54 167-209 (260)
451 1p6f_A NKP46, natural cytotoxi 97.6 0.00028 9.5E-09 37.3 5.6 42 8-54 6-47 (242)
452 2p24_B H-2 class II histocompa 97.6 9.1E-05 3.1E-09 39.8 3.7 28 26-54 161-190 (259)
453 2wbj_D OB TCR; transmembrane, 97.6 0.00011 3.7E-09 39.2 4.0 37 10-48 25-61 (279)
454 2gjj_A A21 single-chain antibo 97.6 0.0001 3.5E-09 39.1 3.8 37 10-48 6-48 (264)
455 2z35_A T-cell receptor alpha-c 97.6 0.00023 7.8E-09 33.2 4.7 31 18-48 7-37 (112)
456 1zxq_A ICAM-2, intercellular a 97.6 0.00019 6.4E-09 37.3 4.6 51 2-54 80-133 (192)
457 4ffy_L DENV1-E111 single chain 97.6 0.00012 4E-09 35.0 3.7 31 18-48 8-42 (126)
458 1pfc_A IGG1 PFC' FC; immunoglo 97.6 2.2E-05 7.6E-10 37.3 1.1 25 26-51 29-55 (113)
459 2aw2_A B and T lymphocyte atte 97.6 0.00046 1.6E-08 32.9 5.5 34 18-51 18-52 (120)
460 1gsm_A Madcam-1, mucosal addre 97.5 0.00032 1.1E-08 36.7 5.4 29 20-49 16-46 (210)
461 4f80_A Butyrophilin subfamily 97.5 0.00035 1.2E-08 35.9 5.5 30 19-48 12-44 (226)
462 3mj6_A Junctional adhesion mol 97.5 8.8E-05 3E-09 38.9 3.3 33 18-50 125-160 (268)
463 3juy_B 3B3 single chain varian 97.5 0.00016 5.6E-09 37.9 4.3 36 10-47 7-44 (256)
464 1j05_L T84.66 antibody, anti-C 97.5 0.00011 3.8E-09 34.2 3.3 31 18-48 8-42 (111)
465 1b6u_A KIR2DL3, P58 killer cel 97.5 0.00017 5.7E-09 38.5 4.3 41 7-52 5-45 (257)
466 1u3h_A T-cell receptor alpha-c 96.7 1.3E-05 4.3E-10 37.5 0.0 31 18-48 6-36 (110)
467 1a6z_A HFE; HFE, hereditary he 97.5 0.00039 1.3E-08 37.6 5.8 41 28-69 198-242 (275)
468 3pv7_A B7-H6, IG-like domain-c 97.5 0.00021 7.1E-09 37.2 4.5 31 18-48 10-45 (248)
469 1fne_B Protein (MHC class II I 97.5 0.0001 3.5E-09 38.9 3.3 28 25-53 135-164 (224)
470 3fru_A Neonatal FC receptor; c 97.5 0.00038 1.3E-08 37.6 5.5 42 26-69 193-236 (269)
471 4ei6_B Vbeta16 XV19 type II na 97.5 0.00022 7.5E-09 37.1 4.5 29 18-47 9-37 (245)
472 3fku_X Neutralizing antibody F 97.5 0.00018 6.1E-09 38.5 4.1 36 9-47 140-177 (280)
473 1c1e_H Catalytic antibody 1E9 97.5 0.00028 9.5E-09 36.1 4.6 31 18-48 7-39 (219)
474 3khq_A B-cell antigen receptor 97.5 0.00027 9.2E-09 34.3 4.3 34 11-48 19-52 (133)
475 3ov6_A Beta-2-microglobulin, T 97.5 0.00012 4.3E-09 41.5 3.5 45 6-54 4-50 (397)
476 2wy3_A MHC class I polypeptide 97.5 1.7E-05 5.7E-10 43.8 0.0 42 27-69 197-242 (319)
477 1hxm_B Gamma-delta T-cell rece 97.5 0.00041 1.4E-08 36.2 5.3 31 18-48 8-40 (242)
478 2d9q_B Granulocyte colony-stim 97.5 4.7E-05 1.6E-09 41.2 1.7 34 19-53 8-46 (313)
479 1q0x_L FAB 9B1, light chain; a 97.4 0.00011 3.6E-09 37.5 2.8 31 18-48 7-40 (212)
480 1eeq_A Kappa-4 immunoglobulin 97.4 0.0002 6.8E-09 33.5 3.6 31 18-48 8-44 (114)
481 4d8p_B Peptide from gamma-glia 97.4 0.00024 8.2E-09 38.2 4.2 28 26-54 143-172 (250)
482 1fo0_B Protein (BM3.3 T cell r 97.4 0.00036 1.2E-08 32.6 4.4 31 18-48 8-38 (112)
483 1dlf_L Anti-dansyl immunoglobu 97.4 0.00037 1.3E-08 32.6 4.4 31 18-48 8-43 (113)
484 1nfd_E H57 FAB; complex (immun 97.4 5.3E-05 1.8E-09 38.6 1.6 31 18-48 6-36 (212)
485 3ov6_A Beta-2-microglobulin, T 97.4 0.00019 6.6E-09 40.8 3.9 27 26-53 317-345 (397)
486 3umt_A SCFV heavy chain and li 97.4 0.00025 8.7E-09 37.2 4.2 27 21-47 12-40 (256)
487 2yf1_A Major histocompatibilit 97.4 0.0005 1.7E-08 38.2 5.4 42 26-69 214-258 (329)
488 1f3r_B FV antibody fragment; I 97.4 0.00016 5.4E-09 38.1 3.3 28 21-48 10-39 (257)
489 2if7_A SLAM family member 6; N 97.4 0.00024 8E-09 36.0 3.8 35 18-53 5-40 (193)
490 1x9q_A SCFV, 4M5.3 anti-fluore 97.4 0.00021 7.3E-09 37.8 3.8 39 8-48 14-57 (268)
491 1nqb_A Single-chain antibody f 97.4 0.00022 7.6E-09 37.6 3.7 31 18-48 7-39 (256)
492 2pet_A Lutheran blood group gl 97.4 0.00012 4.2E-09 37.5 2.6 31 18-48 7-38 (231)
493 2d9c_A Signal-regulatory prote 97.4 0.00026 8.8E-09 34.1 3.6 32 18-49 15-47 (136)
494 3r4d_A CEA-related cell adhesi 97.4 0.00019 6.6E-09 36.2 3.3 28 21-48 9-36 (208)
495 3gkz_A Anti-methamphetamine si 97.4 0.00049 1.7E-08 36.1 4.9 30 18-47 15-46 (257)
496 1xt5_A Variable region-contain 97.4 0.00061 2.1E-08 32.4 4.9 31 18-48 11-44 (135)
497 3jvg_A T-cell surface glycopro 97.4 0.00057 1.9E-08 37.2 5.1 27 27-54 195-223 (281)
498 3vh8_G Killer cell immunoglobu 97.4 0.0012 4.2E-08 35.5 6.4 45 3-52 110-157 (316)
499 3q5y_A TCR N15 beta; IG, T cel 97.3 0.0004 1.4E-08 36.0 4.3 29 18-47 9-37 (240)
500 1fo0_A Protein (BM3.3 T cell r 97.3 0.0005 1.7E-08 32.3 4.3 31 18-48 7-38 (116)
No 1
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.43 E-value=4.3e-13 Score=63.55 Aligned_cols=47 Identities=28% Similarity=0.587 Sum_probs=40.4
Q ss_pred cCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEecC
Q psy4606 8 VPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIIIKE 57 (69)
Q Consensus 8 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~~~ 57 (69)
.||.|... +..+.+.+|+.+.|.|.+.|.|.|.+.|+| +++.+..+.
T Consensus 12 ~pP~f~~~--p~~~~v~~G~~~~l~C~~~G~P~p~v~W~k-~g~~l~~~~ 58 (107)
T 3knb_B 12 SPPCFLRF--PRPVRVVSGAEAELKCVVLGEPPPVVVWEK-GGQQLAASE 58 (107)
T ss_dssp EEEEEEEC--CCCEEEETTSCEEEEEEEEEESCCEEEEEE-TTEECCCCS
T ss_pred CCCEEEeC--CCcEEEeCCCcEEEEEEEEEecCCEEEEEE-Cccccccee
Confidence 47888876 677889999999999999999999999999 787776544
No 2
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.39 E-value=7.9e-13 Score=61.90 Aligned_cols=45 Identities=36% Similarity=0.700 Sum_probs=38.7
Q ss_pred cCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEe
Q psy4606 8 VPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIII 55 (69)
Q Consensus 8 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~ 55 (69)
.||.+... +.++.+.+|+.+.|.|.+.|.|.|.+.|++ +++.+..
T Consensus 4 ~PP~i~~~--p~~~~v~~G~~~~l~C~~~g~P~p~v~W~k-~g~~i~~ 48 (100)
T 3knb_A 4 IPPKIEAL--PSDISIDEGKVLTVACAFTGEPTPEVTWSC-GGRKIHS 48 (100)
T ss_dssp EEEEECCC--CSEEEEETTSEEEEEEEEEEESCCEEEEEE-TTEECCT
T ss_pred CCCEEEeC--CCcEEEeCCCeEEEEEEEEEecCCEEEEEE-CceEeee
Confidence 36777765 777889999999999999999999999999 7877654
No 3
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.37 E-value=7e-13 Score=61.77 Aligned_cols=51 Identities=16% Similarity=0.343 Sum_probs=42.2
Q ss_pred EEEEcCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEecC
Q psy4606 4 LDVVVPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIIIKE 57 (69)
Q Consensus 4 l~V~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~~~ 57 (69)
|.+..+|.+... +....+.+|+.+.|.|.+.|.|.|.+.|++ ++..+....
T Consensus 3 l~~~~~P~~~~~--~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k-~~~~~~~~~ 53 (103)
T 3qp3_A 3 FTLDHAPRITLR--MRSHRVPCGQNTRFILNVQSKPTAEVKWYH-NGVELQESS 53 (103)
T ss_dssp TTTCEEEEEEEC--CCCEEEETTCCEEEEEEEEEESCCEEEEEE-TTEECCCCS
T ss_pred CCCCCCCEEEeC--CcceEEeCCCeEEEEEEEEecCCCEEEEEE-CCEECCCCC
Confidence 455678888776 667788999999999999999999999999 777765443
No 4
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.31 E-value=1.4e-12 Score=62.12 Aligned_cols=53 Identities=17% Similarity=0.229 Sum_probs=44.0
Q ss_pred eeEEEEcCC-EEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEecC
Q psy4606 2 GYLDVVVPP-DILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIIIKE 57 (69)
Q Consensus 2 ~~l~V~~~p-~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~~~ 57 (69)
|.|.|..+| .+... +....+.+|+.+.|.|.+.|.|.|.+.|++ ++..+....
T Consensus 5 a~l~V~~~p~~~~~~--~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k-~g~~l~~~~ 58 (115)
T 2cr6_A 5 SSGLVQGRRVHIIED--LEDVDVQEGSSATFRCRISPANYEPVHWFL-DKTPLHANE 58 (115)
T ss_dssp CCCCCCSSCCEEEEC--CCEEEEETTSCEECCCEEESTTCCSCEEEE-SSCEECCSS
T ss_pred EEEEEcCCCCeEecc--CccEEEeCCCcEEEEEEEcCCCCCccEEEE-CCEECCCCC
Confidence 678888766 66655 677889999999999999999999999999 787776443
No 5
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.30 E-value=5.8e-12 Score=58.27 Aligned_cols=48 Identities=21% Similarity=0.544 Sum_probs=39.6
Q ss_pred EcCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEecC
Q psy4606 7 VVPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIIIKE 57 (69)
Q Consensus 7 ~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~~~ 57 (69)
+.+|.+... +....+.+|+.+.|.|.+.|.|.|.+.|++ ++..+....
T Consensus 3 ~~~P~~~~~--p~~~~~~~G~~~~l~C~~~g~p~p~v~W~~-~g~~~~~~~ 50 (100)
T 2kdg_A 3 MGPPRFIQV--PENMSIDEGRFCRMDFKVSGLPAPDVSWYL-NGRTVQSDD 50 (100)
T ss_dssp CEEEECCCC--CCCEEEETTCCEEEEEECEEESCCEEEEEE-TTEEECCCS
T ss_pred CCCCeEEeC--CCCEEecCCCEEEEEEEEEeeCCCEEEEEE-CCEECcCCC
Confidence 457777665 667788999999999999999999999999 777765543
No 6
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=99.29 E-value=1e-11 Score=61.76 Aligned_cols=51 Identities=25% Similarity=0.519 Sum_probs=41.6
Q ss_pred EEEEcCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEecC
Q psy4606 4 LDVVVPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIIIKE 57 (69)
Q Consensus 4 l~V~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~~~ 57 (69)
|.|..+|.+... +....+..|..+.|.|.+.|.|.|.+.|++ ++..+....
T Consensus 36 ~~v~~~P~~~~~--~~~~~v~~G~~v~L~C~~~g~P~p~v~W~k-~g~~~~~~~ 86 (154)
T 1fhg_A 36 EKPHVKPYFTKT--ILDMEVVEGSAARFDCKVEGYPDPEVMWFK-DDNPVKESR 86 (154)
T ss_dssp CCCCEEEEEEEC--CCCEEEETTSCEEEEEEEEEESCCEEEEEE-TTEECCCSS
T ss_pred ccCCCCCeEEcc--CCcEEEeCCCeEEEEEEEEEecCCEEEEEE-CCEECCCCC
Confidence 445567888776 566788999999999999999999999999 777765443
No 7
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.27 E-value=3.1e-11 Score=55.89 Aligned_cols=44 Identities=36% Similarity=0.609 Sum_probs=37.9
Q ss_pred cCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEE
Q psy4606 8 VPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEII 54 (69)
Q Consensus 8 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~ 54 (69)
.+|.+... +....+..|+.+.|.|.+.|.|.|.+.|++ ++..+.
T Consensus 7 ~~P~i~~~--p~~~~v~~G~~~~l~C~~~g~p~p~v~W~~-~~~~~~ 50 (100)
T 2edj_A 7 GPPIILQG--PANQTLAVDGTALLKCKATGDPLPVISWLK-EGFTFP 50 (100)
T ss_dssp SSCEEEEC--CCCEEEESSSEEEECCEEECSSCCEEEEEE-SSSEES
T ss_pred CCCEEEeC--cCCEEEcCCCcEEEEEEEEEcCCCEEEEEE-CCEECC
Confidence 57888766 667788899999999999999999999999 777765
No 8
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=99.26 E-value=5.9e-12 Score=58.97 Aligned_cols=51 Identities=25% Similarity=0.517 Sum_probs=33.4
Q ss_pred eEEEEcCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEec
Q psy4606 3 YLDVVVPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIIIK 56 (69)
Q Consensus 3 ~l~V~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~~ 56 (69)
.|.+..+|.+... +....+..|+.+.|.|.+.|.|.|.+.|++ ++..+...
T Consensus 4 ~v~~~~~P~~~~~--~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~-~~~~~~~~ 54 (108)
T 3kvq_A 4 TVLERVAPTITGN--LENQTTSIGESIEVSCTASGNPPPQIMWFK-DNETLVED 54 (108)
T ss_dssp -------CCCBSC--CCCEEEETTCCEEEECBCC----CCEEEEE-SSSBCCCB
T ss_pred eECccCCCceecC--CCCeEEeCCCeEEEEEECcCcCCCeEEEEE-CCeEcccC
Confidence 4566688988776 667888999999999999999999999999 66665433
No 9
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.26 E-value=2.8e-11 Score=55.81 Aligned_cols=48 Identities=19% Similarity=0.424 Sum_probs=39.1
Q ss_pred cCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEecCC
Q psy4606 8 VPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIIIKEG 58 (69)
Q Consensus 8 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~~~~ 58 (69)
.+|.+... +....+.+|+.+.|.|.+.|.|.|.+.|++ ++..+....+
T Consensus 4 ~~P~~~~~--~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k-~g~~~~~~~~ 51 (99)
T 1g1c_A 4 EAPKIFER--IQSQTVGQGSDAHFRVRVVGKPDPECEWYK-NGVKIERSDR 51 (99)
T ss_dssp EEEEEEEC--CCCEEEETTSCEEEEEEEEEESCCEEEEEE-TTEECCCCSS
T ss_pred CCCceEec--CcceEEcCCCcEEEEEEEEEeCCCEEEEEE-CCEECCCCCC
Confidence 46777665 666788999999999999999999999999 7777654433
No 10
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.26 E-value=2.8e-11 Score=55.83 Aligned_cols=48 Identities=23% Similarity=0.476 Sum_probs=39.0
Q ss_pred cCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEecCC
Q psy4606 8 VPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIIIKEG 58 (69)
Q Consensus 8 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~~~~ 58 (69)
.+|.+... +....+..|+.+.|.|.+.|.|.|.+.|++ ++..+.....
T Consensus 4 ~~P~~~~~--~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k-~~~~~~~~~~ 51 (99)
T 1u2h_A 4 APPTFKVS--LMDQSVREGQDVIMSIRVQGEPKPVVSWLR-NRQPVRPDQR 51 (99)
T ss_dssp EEEEEEEC--CCCEEEETTCCEEEEEEEEEESCCEEEEEE-TTEECCCBTT
T ss_pred CCCEEEEc--CCceEecCCCEEEEEEEEEEcCCCEEEEEE-CCEECCCCCC
Confidence 46777765 566788899999999999999999999999 7776654433
No 11
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.26 E-value=9.1e-12 Score=64.52 Aligned_cols=48 Identities=25% Similarity=0.547 Sum_probs=38.4
Q ss_pred eeEEEEcCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCc
Q psy4606 2 GYLDVVVPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQ 51 (69)
Q Consensus 2 ~~l~V~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~ 51 (69)
+.|.|..||.+... +....+.+|+.+.|.|.+.|.|.|.++|+++++.
T Consensus 99 ~~l~V~~p~~~~~~--~~~~~v~~g~~~~l~C~~~G~P~P~v~W~~~~~~ 146 (203)
T 4fa8_A 99 EHLSVVKPLTLSVH--SERSQFPDFSVLTVTCTVNAFPHPHVQWLMPEGV 146 (203)
T ss_dssp EEEEEEEEEEEEEE--EEECCSSCSCCEEEEEEEEEESCCEEEECCC---
T ss_pred EEEEecCCceeeec--ceeEEEcCCCEEEEEEEcCCCCCCEEEEEECCee
Confidence 46788888877765 6667788999999999999999999999885543
No 12
>2v9t_A Roundabout homolog 1; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens}
Probab=99.25 E-value=9.4e-12 Score=59.15 Aligned_cols=45 Identities=36% Similarity=0.787 Sum_probs=38.6
Q ss_pred EcCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEE
Q psy4606 7 VVPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEII 54 (69)
Q Consensus 7 ~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~ 54 (69)
..+|.+... +....+..|+.+.|.|.+.|.|.|.+.|++ ++..+.
T Consensus 7 ~~pP~i~~~--p~~~~v~~G~~v~L~C~~~g~P~p~v~W~k-~~~~~~ 51 (117)
T 2v9t_A 7 DFPPRIVEH--PSDLIVSKGEPATLNCKAEGRPTPTIEWYK-GGERVE 51 (117)
T ss_dssp CEEEEEEEC--CCCEEECTTCCEEECCEEEEESCCEEEEEE-TTEECC
T ss_pred cCCCeeEcC--CCCEEEcCCCcEEEEEECCccCCCeEEEEE-CCEecc
Confidence 468888776 667788999999999999999999999999 676654
No 13
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.23 E-value=4.7e-11 Score=55.00 Aligned_cols=47 Identities=30% Similarity=0.519 Sum_probs=38.9
Q ss_pred cCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEecC
Q psy4606 8 VPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIIIKE 57 (69)
Q Consensus 8 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~~~ 57 (69)
.+|.+... +....+.+|+.+.|.|.+.|.|.|.+.|++ ++..+....
T Consensus 5 ~~P~i~~~--~~~~~v~~G~~~~l~C~~~g~p~p~v~W~~-~g~~~~~~~ 51 (99)
T 3puc_A 5 SKPVIVTG--LQDTTVSSDSVAKFAVKATGEPRPTAIWTK-DGKAITQGG 51 (99)
T ss_dssp EEEEEEEC--CCCEEEESSSCEEEEEEEEEESCCEEEEEE-TTEECCSSS
T ss_pred CCCEEEec--CccEEEeCCCcEEEEEEEEecCCCEEEEEE-CCEECcCCC
Confidence 56777766 667788999999999999999999999999 777665443
No 14
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.21 E-value=9.4e-11 Score=55.47 Aligned_cols=46 Identities=22% Similarity=0.310 Sum_probs=38.6
Q ss_pred cCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEec
Q psy4606 8 VPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIIIK 56 (69)
Q Consensus 8 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~~ 56 (69)
.+|.+... +....+.+|+.+.|.|.+.|.|.|.+.|++ ++..+...
T Consensus 6 ~pp~i~~~--~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k-~~~~~~~~ 51 (114)
T 2cqv_A 6 SGPQIIQF--PEDQKVRAGESVELFGKVTGTQPITCTWMK-FRKQIQES 51 (114)
T ss_dssp CCCEESCC--CCSEEEETTCCEEEEEEEESSSSCEEEEEE-SSSBCCCS
T ss_pred CCCEEEeC--CCCeEEeCCCeEEEEEEEEcCCCCEEEEEE-CCEECcCC
Confidence 47888765 667888999999999999999999999999 67666543
No 15
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.21 E-value=1.2e-11 Score=57.25 Aligned_cols=49 Identities=33% Similarity=0.527 Sum_probs=40.8
Q ss_pred eEEEEcCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEE
Q psy4606 3 YLDVVVPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEII 54 (69)
Q Consensus 3 ~l~V~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~ 54 (69)
.+.+..+|.+... +....+.+|+.+.|.|.+.|.|.|.+.|++ ++..+.
T Consensus 5 ~~~~~~~P~~~~~--~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~-~g~~~~ 53 (99)
T 2yr3_A 5 SSGMEVAPSFSSV--LKDCAVIEGQDFVLQCSVRGTPVPRITWLL-NGQPIQ 53 (99)
T ss_dssp CSCCCEEEEEEEC--CCCEEECTTCCEEEECEEEEESCCCCEEEE-SSSBCS
T ss_pred cCCcccCCceeec--CCCCEEeCCCeEEEEEEEeeeCCCeEEEEE-CCEECc
Confidence 3456678888876 667789999999999999999999999999 666553
No 16
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.17 E-value=4.1e-11 Score=57.03 Aligned_cols=45 Identities=33% Similarity=0.591 Sum_probs=37.5
Q ss_pred cCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEe
Q psy4606 8 VPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIII 55 (69)
Q Consensus 8 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~ 55 (69)
.+|.+... +....+..|+.+.|.|.+.|.|.|.+.|++ ++..+..
T Consensus 7 ~pP~i~~~--p~~~~v~~G~~v~l~C~~~g~p~p~i~W~k-~g~~~~~ 51 (118)
T 2eo9_A 7 GPPVIRQG--PVNQTVAVDGTFVLSCVATGSPVPTILWRK-DGVLVST 51 (118)
T ss_dssp CSCCCSBC--CCCEEEETTCEEEEECBCCCSSCCEEEEEE-SSSBCCT
T ss_pred CCCEEEcC--CCCEEEcCCCeEEEEEEEEecCCCEEEEEE-CCEECcC
Confidence 46777665 666788999999999999999999999999 7766643
No 17
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.17 E-value=4.8e-11 Score=55.08 Aligned_cols=53 Identities=19% Similarity=0.357 Sum_probs=37.3
Q ss_pred cCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEecCCcEEE
Q psy4606 8 VPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIIIKEGNTMV 62 (69)
Q Consensus 8 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~~~~~~~~ 62 (69)
.||.+........+.+.+|+.+.|.|.+.| |.|.+.|+| +|+.+..+.++.+.
T Consensus 3 ~P~~i~~p~~~~~v~~~~g~~v~l~C~v~~-p~~~v~W~k-~g~~i~~~~~~~i~ 55 (91)
T 2lvc_A 3 MPVHIVDPREHVFVHAITSECVMLACEVDR-EDAPVRWYK-DGQEVEESDFVVLE 55 (91)
T ss_dssp CCCCCCBCCSCEEEECCTTCCEEEEEECSC-TTSCCEEEE-TTSCCCCCSSCEEE
T ss_pred CCcEEeccCCCeEEEEECCCcEEEEEEECC-CCcEEEEEE-CCEEeeeeeeeeEE
Confidence 466665542222345678999999999966 999999999 88887655544443
No 18
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.15 E-value=7.5e-11 Score=55.34 Aligned_cols=47 Identities=28% Similarity=0.678 Sum_probs=39.3
Q ss_pred cCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEecC
Q psy4606 8 VPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIIIKE 57 (69)
Q Consensus 8 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~~~ 57 (69)
.+|.+... +....+.+|+.+.|.|.+.|.|.|.+.|++ ++..+....
T Consensus 8 ~~P~i~~~--~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~-~g~~~~~~~ 54 (110)
T 2dm3_A 8 FRPHFLQA--PGDLTVQEGKLCRMDCKVSGLPTPDLSWQL-DGKPVRPDS 54 (110)
T ss_dssp CCCEEEEC--CCEEEEESSSCBCCEEEEECSSCCEEECBB-SSSBCCCCS
T ss_pred CCCcEEeC--CCcEEEeCCCEEEEEEEEEEcCCCEEEEEE-CCEECCCCC
Confidence 57888776 677889999999999999999999999999 676665443
No 19
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.15 E-value=1.4e-10 Score=55.28 Aligned_cols=45 Identities=24% Similarity=0.566 Sum_probs=38.5
Q ss_pred cCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEe
Q psy4606 8 VPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIII 55 (69)
Q Consensus 8 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~ 55 (69)
.+|.+... +....+.+|+.+.|.|.+.|.|.|.+.|++ ++..+..
T Consensus 14 ~~p~f~~~--p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k-~~~~~~~ 58 (116)
T 2kkq_A 14 RAPMFIYK--PQSKKVLEGDSVKLECQISAIPPPKLFWKR-NNEMVQF 58 (116)
T ss_dssp BCCCBSSC--CCCEEEETTEEEEEEEEBCCBSCCEEEEEE-TTEECCC
T ss_pred CCCeEEeC--CCcEEEeCCCcEEEEEEEeccCCCEEEEEE-CCEECcC
Confidence 57777776 677889999999999999999999999999 7766654
No 20
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.13 E-value=1.1e-10 Score=54.41 Aligned_cols=47 Identities=26% Similarity=0.538 Sum_probs=39.2
Q ss_pred EcCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEec
Q psy4606 7 VVPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIIIK 56 (69)
Q Consensus 7 ~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~~ 56 (69)
..+|.+... +....+.+|+.+.|.|.+.|.|.|.+.|++ ++..+...
T Consensus 11 ~~~P~~~~~--~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~-~~~~~~~~ 57 (107)
T 3irg_B 11 GSPPCFLRF--PRPVRVVSGAEAELKCVVLGEPPPVVVWEK-GGQQLAAS 57 (107)
T ss_dssp CEEEEEEEC--CCCEEEETTSCEEEEEEEEEESCCEEEEEE-TTEECCCC
T ss_pred CCCCeeEcC--CccEEEeCCCeEEEEEEEeecCCCEEEEEE-CCeECCCC
Confidence 357888776 667888999999999999999999999999 77666543
No 21
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.13 E-value=3.7e-10 Score=62.55 Aligned_cols=52 Identities=25% Similarity=0.569 Sum_probs=44.2
Q ss_pred eeEEEEcCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEec
Q psy4606 2 GYLDVVVPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIIIK 56 (69)
Q Consensus 2 ~~l~V~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~~ 56 (69)
+.|.|..+|.+... .....+..|..+.|.|.+.|.|.|.+.|++ +|..+...
T Consensus 288 ~~l~v~~~P~~~~~--~~~~~v~~g~~v~l~C~~~g~P~p~i~W~k-~g~~l~~~ 339 (384)
T 3kld_A 288 GQLTFYAQPNWVQI--INDIHVAMEESVFWECKANGRPKPTYRWLK-NGDPLLTR 339 (384)
T ss_dssp EEEEEEEEEEEEEC--CCCEEECTTCCEEEECEEEEESCCEEEEEE-TTEECCCB
T ss_pred EEEEEecCCccccC--CCceEecCCCCEEEEeECCccCCCeEEEEE-CCEECCCC
Confidence 56888889988776 666788899999999999999999999999 78776543
No 22
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.13 E-value=1.3e-10 Score=53.21 Aligned_cols=43 Identities=30% Similarity=0.451 Sum_probs=36.1
Q ss_pred cCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCC--cEE
Q psy4606 8 VPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDG--QEI 53 (69)
Q Consensus 8 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~--~~~ 53 (69)
.+|.+... +....+..|+.+.|.|.+.|.|.|.+.|++ ++ ..+
T Consensus 1 ~~P~i~~~--~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k-~~~~~~~ 45 (93)
T 1wit_A 1 LKPKILTA--SRKIKIKAGFTHNLEVDFIGAPDPTATWTV-GDSGAAL 45 (93)
T ss_dssp CCCEECCC--CCEEEECTTBCCEEEEEEECCSSCEEEEEC-STTTCBC
T ss_pred CCCeEEcC--CCceEEeCCCEEEEEEEEEEcCCCEEEEEE-CCCCccc
Confidence 36887655 667889999999999999999999999999 56 554
No 23
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.13 E-value=1.7e-10 Score=54.19 Aligned_cols=45 Identities=27% Similarity=0.507 Sum_probs=37.8
Q ss_pred cCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEe
Q psy4606 8 VPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIII 55 (69)
Q Consensus 8 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~ 55 (69)
.+|.+... +....+.+|+.+.|.|.+.|.|.|.+.|++ ++..+..
T Consensus 7 ~~P~~~~~--~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k-~g~~~~~ 51 (110)
T 2dm2_A 7 GAPFFEMK--LKHYKIFEGMPVTFTCRVAGNPKPKIYWFK-DGKQISP 51 (110)
T ss_dssp CCCCBSSC--CCCEEEETTCCEEEEEEBCCSSCCEEEEEC-SSCBCCT
T ss_pred CCCEEEec--CcCeEEeCCCeEEEEEEEEecCCCEEEEEE-CCEECCC
Confidence 57777665 666788999999999999999999999999 7766654
No 24
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.10 E-value=5.7e-10 Score=51.25 Aligned_cols=44 Identities=36% Similarity=0.730 Sum_probs=36.7
Q ss_pred cCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEE
Q psy4606 8 VPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEII 54 (69)
Q Consensus 8 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~ 54 (69)
.+|.+... +....+.+|+.+.|.|.+.|.|.|.+.|++ ++..+.
T Consensus 4 ~pP~i~~~--~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~-~~~~~~ 47 (100)
T 3irg_A 4 IPPKIEAL--PSDISIDEGKVLTVACAFTGEPTPEVTWSC-GGRKIH 47 (100)
T ss_dssp EEEEECCC--CSEEEEETTSEEEEEEEEEEESCCEEEEEE-TTEECC
T ss_pred CCCeeecC--CCcEEEcCCCcEEEEEEEEEcCCCceEEEE-CCEEee
Confidence 35666655 667788999999999999999999999999 776664
No 25
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.09 E-value=8.2e-10 Score=58.56 Aligned_cols=54 Identities=22% Similarity=0.480 Sum_probs=44.4
Q ss_pred eeEEEEcCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEecCC
Q psy4606 2 GYLDVVVPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIIIKEG 58 (69)
Q Consensus 2 ~~l~V~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~~~~ 58 (69)
..|.|..+|.+... +....+..|..+.|.|.+.|.|.|.+.|++ ++..+.....
T Consensus 185 ~~l~V~~~p~~~~~--~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~-~~~~~~~~~~ 238 (284)
T 2rik_A 185 TSLKVKEPPVFRKK--PHPVETLKGADVHLECELQGTPPFQVSWHK-DKRELRSGKK 238 (284)
T ss_dssp EEEEEECCCBCCSC--CCCEEECTTCCEEEEEECBSSSCCEEEEEE-TTEEECBTTT
T ss_pred EEEEEecCCcceeC--CCcceecCCCeEEEEEEEEecCCCEEEEEE-CCEECcCCCC
Confidence 46788889988765 556778899999999999999999999999 7877765443
No 26
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.09 E-value=5.5e-10 Score=57.42 Aligned_cols=51 Identities=25% Similarity=0.526 Sum_probs=36.5
Q ss_pred eeEEEEcCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEE
Q psy4606 2 GYLDVVVPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEII 54 (69)
Q Consensus 2 ~~l~V~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~ 54 (69)
..|.|..+|..... ........|+.+.|.|.+.|.|.|.+.|++++++.+.
T Consensus 109 ~~l~V~~~~~~~~~--~~~~~~~~g~~v~L~C~~~g~P~p~i~W~~~~g~~~~ 159 (222)
T 3sbw_C 109 ITVKVNAPYNKINQ--RILVVDPVTSEHELTCQAEGYPKAEVIWTSSDHQVLS 159 (222)
T ss_dssp EEEEEEBCCCCCEE--EEEEEETTTTEEEEEEEEEEBSCCEEEEEETTCCEEC
T ss_pred EEEEEECCCCCCCc--eeeeeecCCCcEEEEEEecCCCCCeEEEEECCCceec
Confidence 35677766643322 2222567899999999999999999999994466553
No 27
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.08 E-value=3e-09 Score=53.69 Aligned_cols=51 Identities=27% Similarity=0.563 Sum_probs=42.2
Q ss_pred eeEEEEcCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeC-CCcEEE
Q psy4606 2 GYLDVVVPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKRE-DGQEII 54 (69)
Q Consensus 2 ~~l~V~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~-~~~~~~ 54 (69)
..|.|..+|.+... +....+..|..+.|.|.+.|.|.|.+.|++. ++..+.
T Consensus 85 ~~l~V~~~p~~~~~--~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~g~~~~ 136 (190)
T 2wv3_A 85 ATIEVKAAPDITGH--KRSENKNEGQDAMMYCKSVGYPHPEWMWRKKENGVFEE 136 (190)
T ss_dssp EEEEEECCCEEEEE--CSEEEEETTSCEEEEEEEECSSCCEEEEEEEETTEEEE
T ss_pred EEEEEecCCccccc--CCcceeeCCCcEEEEEEeCccCCCceEEEEcCCCceee
Confidence 46888899998876 5567788999999999999999999999984 455543
No 28
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=99.07 E-value=1.2e-09 Score=49.73 Aligned_cols=44 Identities=27% Similarity=0.427 Sum_probs=34.8
Q ss_pred CCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEe
Q psy4606 9 PPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIII 55 (69)
Q Consensus 9 ~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~ 55 (69)
++.+... +....+.+|+.+.|.|.+.|.|.|.+.|++ ++..+..
T Consensus 3 ~~~i~~~--p~~~~v~~G~~~~l~C~~~g~p~p~i~W~~-~~~~~~~ 46 (91)
T 3bfo_A 3 KLQICVE--PTSQKLMPGSTLVLQCVAVGSPIPHYQWFK-NELPLTH 46 (91)
T ss_dssp CCEEEEC--CCCEEECTTSCEEEECEEECSSCCEEEEEE-TTEECTT
T ss_pred ceEEEEC--CCccEecCCCcEEEEEEeccCCCCEEEEEc-CCeeCCc
Confidence 3455554 555678899999999999999999999999 7766543
No 29
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=99.07 E-value=5e-10 Score=64.77 Aligned_cols=53 Identities=23% Similarity=0.496 Sum_probs=44.6
Q ss_pred eeEEEEcCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEecC
Q psy4606 2 GYLDVVVPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIIIKE 57 (69)
Q Consensus 2 ~~l~V~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~~~ 57 (69)
+.|.|+.+|.+... +......+|..+.|.|.+.|.|.|.+.|+| ++..+..+.
T Consensus 377 ~~l~V~~~P~~~~~--~~~~~~~~G~~v~l~C~~~g~P~p~v~W~k-~g~~l~~~~ 429 (570)
T 3b43_A 377 TSLKVKEPPVFRKK--PHPVETLKGADVHLECELQGTPPFQVSWHK-DKRELRSGK 429 (570)
T ss_dssp EEECEECCCEECSC--CCCEEECTTCCEEEEEEEESSSSCCCEEEE-TTEECCSSS
T ss_pred EEEEecCCCeeecC--CCceeecCCCEEEEEEEEecCCCCEEEEEE-CCEECcCCC
Confidence 56888999998776 566778899999999999999999999999 777765443
No 30
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.06 E-value=9.7e-10 Score=55.37 Aligned_cols=50 Identities=22% Similarity=0.377 Sum_probs=41.7
Q ss_pred eeEEEEcCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEE
Q psy4606 2 GYLDVVVPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEII 54 (69)
Q Consensus 2 ~~l~V~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~ 54 (69)
..|.|..+|.+... +....+..|+.+.|.|.+.|.|.|.+.|++ ++..+.
T Consensus 93 ~~l~v~~~p~~~~~--~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~-~~~~~~ 142 (191)
T 1epf_A 93 VNVKIFQKLMFKNA--PTPQEFKEGEDAVIVCDVVSSLPPTIIWKH-KGRDVI 142 (191)
T ss_dssp EEEEEECCSEEEEC--CSSEECCTTSCEEECCEEECSSCCEEEEEE-TTEEGG
T ss_pred EEEEeecCceEecC--CCcEeecCCCeEEEEEEECCCCCCEEEEEE-CCEEee
Confidence 35677788888776 556778899999999999999999999999 776654
No 31
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.05 E-value=7.1e-10 Score=51.17 Aligned_cols=47 Identities=17% Similarity=0.193 Sum_probs=37.3
Q ss_pred CCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEecCCc
Q psy4606 9 PPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIIIKEGN 59 (69)
Q Consensus 9 ~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~~~~~ 59 (69)
+|.+... +.+..+.+|+.+.|.|.+.+ |.|.+.|+| +|..+..+.++
T Consensus 5 ~~~~~~~--~~~~~v~~G~~v~l~C~v~~-~~~~v~W~k-~g~~i~~~~~~ 51 (93)
T 1waa_A 5 LIEVEKP--LYGVEVFVGETAHFEIELSE-PDVHGQWKL-KGQPLAASPDC 51 (93)
T ss_dssp CCCEEEC--CCCEEEETTSCEEEEEEESS-SSCCCEEEE-TTEECCCBTTE
T ss_pred CcEeecc--CcceEEeCCCCEEEEEEECC-CCCeEEEEE-CCEECcCCCCE
Confidence 5677665 66788999999999999987 558899999 88877654443
No 32
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.05 E-value=2e-09 Score=54.16 Aligned_cols=49 Identities=18% Similarity=0.396 Sum_probs=39.1
Q ss_pred eEEEEcCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEE
Q psy4606 3 YLDVVVPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEII 54 (69)
Q Consensus 3 ~l~V~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~ 54 (69)
.|.|..+|.+... +....+..|+.+.|.|.+.|.|.|.+.|++ ++..+.
T Consensus 90 ~l~v~~~p~~~~~--~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~-~~~~~~ 138 (189)
T 2v44_A 90 VLEIYQKLTFREV--VSPQEFKQGEDAEVVCRVSSSPAPAVSWLY-HNEEVT 138 (189)
T ss_dssp EEEEECCCEEESC--CCSEEEETTSCEEECCEEECSSCCEEEEEE-EC--CE
T ss_pred EEEEecCCceeec--CCcEEEeCCCCEEEEEEECcCCCCcEEEEE-CCcEEe
Confidence 5778888888765 455678899999999999999999999999 665554
No 33
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.05 E-value=1.3e-09 Score=55.17 Aligned_cols=50 Identities=28% Similarity=0.591 Sum_probs=42.5
Q ss_pred eeEEEEcCCEEeecCCCceEEecCCCeEEEEeeEeeecCC-eEEEEeCCCcEEE
Q psy4606 2 GYLDVVVPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRP-HITWKREDGQEII 54 (69)
Q Consensus 2 ~~l~V~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P-~~~W~~~~~~~~~ 54 (69)
..|.|..+|.+... +....+.+|..+.|.|.+.|.|.| .+.|++ ++..+.
T Consensus 99 ~~l~V~~~p~~~~~--~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~-~~~~~~ 149 (195)
T 2c5d_C 99 GYVGLEGLPYFLEE--PEDRTVAANTPFNLSCQAQGPPEPVDLLWLQ-DAVPLA 149 (195)
T ss_dssp EEEEECCSCEEEEC--CCCEEECTTCCEEEEEEEECSSCCCEEEEEE-SSCBSS
T ss_pred EEEEEecCCeEEcC--CCcEEEcCCCEEEEEeECCCCCCCCEEEEEE-CCEecc
Confidence 56888899988776 556788899999999999999999 999999 666654
No 34
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.04 E-value=9.1e-10 Score=52.36 Aligned_cols=47 Identities=26% Similarity=0.535 Sum_probs=36.7
Q ss_pred EcCCEEeec-CCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEE
Q psy4606 7 VVPPDILNE-ESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEII 54 (69)
Q Consensus 7 ~~~p~~~~~-~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~ 54 (69)
..+|.+... .......+.+|+.+.|.|.+.|.|.|.+.|++ ++..+.
T Consensus 19 ~~~P~i~~~~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k-~g~~l~ 66 (118)
T 2e7c_A 19 AEPPKIRLPRHLRQTYIRKVGEQLNLVVPFQGKPRPQVVWTK-GGAPLD 66 (118)
T ss_dssp SEEEEECCCTTTSSCEEEESSSCEEEEEEEEEESCCEEEEEE-TTEECC
T ss_pred ccCCeEecCcccCCCEEEECCCEEEEEEEEccCCCCEEEEEE-CCEECC
Confidence 356776432 12456788899999999999999999999999 776664
No 35
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=99.04 E-value=6.1e-10 Score=52.09 Aligned_cols=46 Identities=22% Similarity=0.330 Sum_probs=35.0
Q ss_pred EEcCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEecC
Q psy4606 6 VVVPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIIIKE 57 (69)
Q Consensus 6 V~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~~~ 57 (69)
|++||++... .. ...+..+.|.|.+.|.|.|.++|++ +|+.+..+.
T Consensus 1 V~~pP~i~~~--~~---~~~~~~~~~~c~v~G~P~P~i~W~k-~g~~l~~~~ 46 (103)
T 1wwb_X 1 VHFAPTITFL--ES---PTSDHHWCIPFTVKGNPKPALQWFY-NGAILNESK 46 (103)
T ss_dssp CCCCCCCCCC--CC---CCCCCEEEEEEEEECSSCCEEEEEE-TTEEECCCS
T ss_pred CCCCCEEEec--cC---ceECcEEEEEEEEEEeCCCEEEEEE-CCEECCCCC
Confidence 4578886543 21 2457889999999999999999999 787776543
No 36
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.03 E-value=1.3e-09 Score=54.68 Aligned_cols=53 Identities=34% Similarity=0.590 Sum_probs=40.4
Q ss_pred eEEEEcCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEec
Q psy4606 3 YLDVVVPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIIIK 56 (69)
Q Consensus 3 ~l~V~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~~ 56 (69)
.|.|..+|.+..........+..|..+.|.|.+.|.|.|.+.|++ ++..+...
T Consensus 90 ~l~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~-~g~~~~~~ 142 (189)
T 2v5t_A 90 IVIVNVPPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFR-NGKLIEEN 142 (189)
T ss_dssp EEEEEEEEEEECSCCEEEEETTSCCCEEEECEEEEESCCEEEEEE-TTEECCCS
T ss_pred EEEecCCCCcccccccccccccCCCcEEEEEEEccCCCCeEEEEE-CCEECcCC
Confidence 456667777765422335567789999999999999999999999 77766543
No 37
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.03 E-value=3.9e-10 Score=51.27 Aligned_cols=43 Identities=21% Similarity=0.514 Sum_probs=34.3
Q ss_pred CceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEecCCcEEE
Q psy4606 18 SSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIIIKEGNTMV 62 (69)
Q Consensus 18 ~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~~~~~~~~ 62 (69)
...+.+.+|+.+.|.|.+.| |.|.+.|+| +|+.+..+.++.+.
T Consensus 3 lt~v~~~~G~~v~l~C~vs~-p~p~v~W~k-~g~~l~~~~~~~~~ 45 (84)
T 2lu7_A 3 MTRVRSTPGGDLELVVHLSG-PGGPVRWYK-DGERLASQGRVQLE 45 (84)
T ss_dssp CCCEEECTTSCEEEECCCSC-CSTTCEEEE-TTEECCCCSSEEEE
T ss_pred CeEEEEecCCCEEEEEEECC-CCcEEEEEE-CCEEccccccEEEe
Confidence 34678889999999999977 999999999 88888655544333
No 38
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.02 E-value=3e-09 Score=53.28 Aligned_cols=49 Identities=33% Similarity=0.560 Sum_probs=42.1
Q ss_pred eeEEEEcCCEEeecCCCceEEecCCCeEEEEeeEeeecCC-eEEEEeCCCcEE
Q psy4606 2 GYLDVVVPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRP-HITWKREDGQEI 53 (69)
Q Consensus 2 ~~l~V~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P-~~~W~~~~~~~~ 53 (69)
..|.|..+|.+... +....+..|..+.|.|.+.|.|.| .+.|++ ++..+
T Consensus 91 ~~l~V~~~p~~~~~--~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~-~~~~~ 140 (182)
T 1rhf_A 91 VWLTVEGVPFFTVE--PKDLAVPPNAPFQLSCEAVGPPEPVTIVWWR-GTTKI 140 (182)
T ss_dssp EEEEEECSCEEEEC--CCCEEECTTCCEEEEEEEECSSSCCEEEEEE-TTEEC
T ss_pred EEEEEecCCeEEec--CcceEecCCCEEEEEeEecCCCCCCEEEEEc-CCeEC
Confidence 46888899998776 556788899999999999999999 999999 66655
No 39
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.02 E-value=2.9e-09 Score=53.67 Aligned_cols=52 Identities=27% Similarity=0.517 Sum_probs=40.7
Q ss_pred eEEEE---cCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEecC
Q psy4606 3 YLDVV---VPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIIIKE 57 (69)
Q Consensus 3 ~l~V~---~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~~~ 57 (69)
.|.|. .+|.+... +....+..|..+.|.|.+.|.|.|.+.|++ ++..+....
T Consensus 94 ~l~v~~~~~~p~~~~~--~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~-~~~~~~~~~ 148 (194)
T 2a38_A 94 ELLVKAETAPPNFVQR--LQSMTVRQGSQVRLQVRVTGIPTPVVKFYR-DGAEIQSSL 148 (194)
T ss_dssp EEEEECCCEEEEEEEC--CCCEEECTTEEEEEEEEEEEESCCEEEEEE-TTEECCCSS
T ss_pred EEEEccCCCCCEEEeC--CccEEEcCCCEEEEEEEEEEecCCeEEEEE-CCEECCCCC
Confidence 56666 46666655 556778899999999999999999999999 777665433
No 40
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.02 E-value=1.3e-09 Score=61.56 Aligned_cols=54 Identities=19% Similarity=0.212 Sum_probs=43.3
Q ss_pred eeEEEEcCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEec
Q psy4606 2 GYLDVVVPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIIIK 56 (69)
Q Consensus 2 ~~l~V~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~~ 56 (69)
+.|.|..+|.+...+......+.+|+.+.|.|.+.|.|.|.++|+| +|..+...
T Consensus 317 ~~L~V~~~p~i~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~i~W~k-~g~~l~~~ 370 (423)
T 3qs7_E 317 ALVTIVEKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTF-SRKSFPCE 370 (423)
T ss_dssp EEEEEESSCEEEEC---CEECCCTTCCCCEEEEEEEESCCEEEEEE-TTEEEECB
T ss_pred EEEEEEeCCcceEcCCCccEEecCCCeEEEEEEEEEcCCCeEEEEE-CCEECCCc
Confidence 5788998998766533345677889999999999999999999999 88888644
No 41
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.01 E-value=1.8e-09 Score=54.33 Aligned_cols=52 Identities=25% Similarity=0.509 Sum_probs=42.7
Q ss_pred eeEEEEcCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEec
Q psy4606 2 GYLDVVVPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIIIK 56 (69)
Q Consensus 2 ~~l~V~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~~ 56 (69)
..|.|..+|.+... +....+..|..+.|.|.+.|.|.|.+.|++ ++..+...
T Consensus 93 ~~l~v~~~p~~~~~--~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~-~~~~~~~~ 144 (192)
T 2iep_A 93 GALQVKMKPKITRP--PINVKIIEGLKAVLPCTTMGNPKPSVSWIK-GDSALREN 144 (192)
T ss_dssp EEEEEEEEEEEEEC--CCCEEEETTSCEEECCEEEEESCCEEEEEE-TTEECCCC
T ss_pred EEEEEEeCCccccC--CcceEEeCCCcEEEEEEEeccCCceEEEEe-CCEEccCC
Confidence 35778888888765 556778899999999999999999999999 77666543
No 42
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.01 E-value=3e-09 Score=58.48 Aligned_cols=52 Identities=21% Similarity=0.372 Sum_probs=43.3
Q ss_pred eeEEEEcCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEec
Q psy4606 2 GYLDVVVPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIIIK 56 (69)
Q Consensus 2 ~~l~V~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~~ 56 (69)
..|.|..+|.+... +....+..|+.+.|.|.+.|.|.|.+.|++ +|..+...
T Consensus 300 ~~l~V~~~p~~~~~--~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~-~g~~i~~~ 351 (388)
T 2v5m_A 300 TVLTVTAPLSAKID--PPTQTVDFGRPAVFTCQYTGNPIKTVSWMK-DGKAIGHS 351 (388)
T ss_dssp EEEEEEEEEEEEEE--SSEEEECTTSCEEEEEEEEEECCCEEEEEE-TTEECSCC
T ss_pred EEEEEeCCCccccC--CCcEEecCCCCEEEEEEeccccCCeEEEEE-CCEECccC
Confidence 46788888887765 566788899999999999999999999999 77776543
No 43
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=99.00 E-value=2.7e-10 Score=53.50 Aligned_cols=44 Identities=30% Similarity=0.655 Sum_probs=37.2
Q ss_pred cCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEE
Q psy4606 8 VPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEII 54 (69)
Q Consensus 8 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~ 54 (69)
.+|.+... +....+.+|+.+.|.|.+.|.|.|.+.|++ ++..+.
T Consensus 13 ~~~~i~~~--p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k-~g~~l~ 56 (106)
T 1nct_A 13 LAARILTK--PRSMTVYEGESARFSCDTDGEPVPTVTWLR-KGQVLS 56 (106)
T ss_dssp CCCEEEEC--CCCEEESSSSCEECCEEEECSSCCBCCBCS-SSSCCT
T ss_pred CCCEEEEC--CCCEEEeCCCcEEEEEEEEEcCCCEEEEEE-CCEECC
Confidence 45777776 677889999999999999999999999999 666554
No 44
>2e7b_A Obscurin; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yz8_A
Probab=98.99 E-value=9.2e-10 Score=51.12 Aligned_cols=45 Identities=20% Similarity=0.347 Sum_probs=36.3
Q ss_pred cCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEec
Q psy4606 8 VPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIIIK 56 (69)
Q Consensus 8 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~~ 56 (69)
.+|.+... +....+.+|+.+.|.|.+.|.|.| +.|++ ++..+...
T Consensus 7 ~pp~~~~~--~~~~~v~~G~~v~l~C~~~~~p~~-v~W~k-~~~~l~~~ 51 (103)
T 2e7b_A 7 GPVRFQEA--LKDLEVLEGGAATLRCVLSSVAAP-VKWCY-GNNVLRPG 51 (103)
T ss_dssp CCCCCTBC--CCCEEEESSSCEEEEEECSSCCCS-CEEEE-SSSBCCCS
T ss_pred CCCEEEec--CccEEEECCCcEEEEEEEeCCCCC-eEEEE-CCEECCCC
Confidence 46666655 667888999999999999999999 99999 67666433
No 45
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=98.97 E-value=3.7e-09 Score=58.11 Aligned_cols=52 Identities=35% Similarity=0.654 Sum_probs=43.4
Q ss_pred eeEEEEcCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEec
Q psy4606 2 GYLDVVVPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIIIK 56 (69)
Q Consensus 2 ~~l~V~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~~ 56 (69)
..|.|..+|.+... +....+..|+.+.|.|.+.|.|.|.+.|++ +|..+...
T Consensus 287 ~~l~V~~~p~~~~~--~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~-~g~~~~~~ 338 (382)
T 1cs6_A 287 GRIIIHAQPDWLDV--ITDTEADIGSDLRWSCVASGKPRPAVRWLR-DGQPLASQ 338 (382)
T ss_dssp EEEEEEEEEEEEEC--CCCEEEETTCCEEEECEEEEESCCEEEEEE-TTEECCCC
T ss_pred EEEEEecCCCcccC--CCccEEcCCCeEEEEEEeeeecCCEEEEEE-CCEECCCC
Confidence 46778888988776 556778899999999999999999999999 77776543
No 46
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=98.97 E-value=1.9e-09 Score=62.36 Aligned_cols=48 Identities=25% Similarity=0.519 Sum_probs=40.7
Q ss_pred EEcCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEec
Q psy4606 6 VVVPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIIIK 56 (69)
Q Consensus 6 V~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~~ 56 (69)
|+.||.+... ...+.+..|+.+.|.|.+.|.|.|.+.|+| ++..+...
T Consensus 2 v~~pP~f~~~--~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k-~g~~l~~~ 49 (570)
T 3b43_A 2 AMEPPYFIEP--LEHVEAAIGEPITLQCKVDGTPEIRIAWYK-EHTKLRSA 49 (570)
T ss_dssp CCCCCEEEEC--CCCEEECTTSCEEEEEEEESSSSCEEEEEC-SSSBCCCC
T ss_pred CCCCCcceEE--CCceEEcCCCEEEEEEEEccCCCCEEEEEE-CCEEccCC
Confidence 4578998876 667889999999999999999999999999 77766543
No 47
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=98.97 E-value=4.6e-09 Score=48.22 Aligned_cols=39 Identities=28% Similarity=0.547 Sum_probs=32.6
Q ss_pred CceEEecCCCeEEEEeeEeee-cCCeEEEEeCCCcEEEecC
Q psy4606 18 SSDIMAPEGGTIKLVCKAKGY-PRPHITWKREDGQEIIIKE 57 (69)
Q Consensus 18 ~~~~~~~~g~~~~l~C~~~g~-P~P~~~W~~~~~~~~~~~~ 57 (69)
+....+.+|+.+.|.|.+.|. |.|.+.|++ ++..+....
T Consensus 8 ~~~~~v~~G~~v~l~C~~~g~~p~~~v~W~~-~~~~~~~~~ 47 (97)
T 2bk8_A 8 IMHAVGEEGGHVKYVCKIENYDQSTQVTWYF-GVRQLENSE 47 (97)
T ss_dssp CCCEEECTTCCEEEEEEEESCCTTCEEEEEE-TTEECCSSS
T ss_pred CcCEEEcCCCcEEEEEEEeccCCCCEEEEEE-CCEECcCCC
Confidence 566788899999999999997 999999999 776665433
No 48
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.97 E-value=9.7e-10 Score=51.25 Aligned_cols=45 Identities=20% Similarity=0.277 Sum_probs=36.7
Q ss_pred CCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEecCC
Q psy4606 9 PPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIIIKEG 58 (69)
Q Consensus 9 ~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~~~~ 58 (69)
+|.+... +.+..+.+|+.+.|.|.+ .|.|.+.|+| +|..+....+
T Consensus 7 p~~~~~~--~~~~~v~~G~~v~l~C~v--~p~p~v~W~k-~g~~l~~~~r 51 (100)
T 2yuz_A 7 GLKILTP--LTDQTVNLGKEICLKCEI--SENIPGKWTK-NGLPVQESDR 51 (100)
T ss_dssp CCCCSBC--CCCEEEETTSCCCEEEEC--SSCCCEEEEE-TTEECCCCSS
T ss_pred CCEEecc--CCceEEcCCCCEEEEEEe--CCCCeEEEEE-CCEECCCCCc
Confidence 5666655 677889999999999999 8999999999 8877765443
No 49
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=98.97 E-value=6.9e-09 Score=53.21 Aligned_cols=51 Identities=25% Similarity=0.486 Sum_probs=40.3
Q ss_pred eeEEEEcC-------CEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEe
Q psy4606 2 GYLDVVVP-------PDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIII 55 (69)
Q Consensus 2 ~~l~V~~~-------p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~ 55 (69)
..|.|..+ |.+... +....+..|..+.|.|.+.|.|.|.+.|++ ++..+..
T Consensus 96 ~~l~V~~~~~~~~~~p~~~~~--~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~-~~~~~~~ 153 (212)
T 2yd1_A 96 ATLTIYEGDKTPAGFPVITQG--PGTRVIEVGHTVLMTCKAIGNPTPNIYWIK-NQTKVDM 153 (212)
T ss_dssp EEEEEECTTCSCTTCCEEEEC--CCCEEEETTCCEEECCEEECSSCCEEEEEE-TTEECCT
T ss_pred EEEEEecccCCCCCCCeeEeC--CCceEeecCCeEEEEEEeccCCCCeEEEEE-CCeEccc
Confidence 35667655 677665 555678889999999999999999999999 7766654
No 50
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=98.97 E-value=7.4e-09 Score=52.33 Aligned_cols=55 Identities=25% Similarity=0.382 Sum_probs=40.8
Q ss_pred eeEEEEcCCEEeecC---CCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEecC
Q psy4606 2 GYLDVVVPPDILNEE---SSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIIIKE 57 (69)
Q Consensus 2 ~~l~V~~~p~~~~~~---~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~~~ 57 (69)
..|.|..+|.+.... .+....+..|..+.|.|.+.|.|.|.+.|++ ++..+....
T Consensus 92 ~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~-~~~~~~~~~ 149 (197)
T 2j8h_A 92 ASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQK-GQDLIDNNG 149 (197)
T ss_dssp EEEEEEEEEEECCSSCBTTBEEEEEETTCCCEEEEEEEEESCCEEEEEE-SSCEECSSS
T ss_pred EEEEEcCCCcCCCCccccccCeEEEeCCCEEEEEEEEEecCCCcEEEEE-CCEEeecCC
Confidence 356777777654321 0245667889999999999999999999999 777776443
No 51
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=98.96 E-value=1.2e-09 Score=50.18 Aligned_cols=43 Identities=23% Similarity=0.522 Sum_probs=34.9
Q ss_pred CCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEe
Q psy4606 9 PPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIII 55 (69)
Q Consensus 9 ~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~ 55 (69)
+|.+... +....+.+|+.+.|.|.+.|.| |.+.|++ ++..+..
T Consensus 9 pp~~~~~--~~~~~v~~G~~v~l~C~~~g~p-p~i~W~k-~g~~~~~ 51 (95)
T 2ckn_A 9 PWGVPVE--VESLLVHPGDLLQLRCRLRDDV-QSINWLR-DGVQLVE 51 (95)
T ss_dssp SCCBTTB--BCCEEECTTSCEEEECCEESSC-CEEEEEB-TTBCCCC
T ss_pred CCEEEcC--cceEEEcCCCeEEEEEECCCCC-CceEEEE-CCEecCC
Confidence 4555544 6677889999999999999998 8999999 7776653
No 52
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=98.96 E-value=4.5e-09 Score=52.93 Aligned_cols=47 Identities=34% Similarity=0.596 Sum_probs=39.3
Q ss_pred EcCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEec
Q psy4606 7 VVPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIIIK 56 (69)
Q Consensus 7 ~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~~ 56 (69)
..+|.+... +....+.+|+.+.|.|.+.|.|.|.+.|++ ++..+...
T Consensus 5 ~~~P~~~~~--~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~-~~~~~~~~ 51 (197)
T 3lcy_A 5 GEAPGIRKE--MKDVTTKLGEAAQLSCQIVGRPLPDIKWYR-FGKELIQS 51 (197)
T ss_dssp CEEEEEEEC--CCCEEEETTSEEEEEEEEEEESCCEEEEEE-TTEEECCC
T ss_pred CCCCccccc--CCceEEeCCCcEEEEEEEecCCCCEEEEEE-CCEECCCC
Confidence 467888776 667888999999999999999999999999 77766543
No 53
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=98.96 E-value=3.3e-09 Score=58.50 Aligned_cols=51 Identities=35% Similarity=0.668 Sum_probs=42.9
Q ss_pred eeEEEEcCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEe
Q psy4606 2 GYLDVVVPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIII 55 (69)
Q Consensus 2 ~~l~V~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~ 55 (69)
..|.|..+|.+... +....+.+|..+.|.|.+.|.|.|.+.|++ ++..+..
T Consensus 305 ~~l~V~~~p~~~~~--~~~~~~~~g~~v~l~C~~~g~p~p~v~W~~-~g~~~~~ 355 (403)
T 3laf_A 305 AELTVLVPPWFLNH--PSNLYAYESMDIEFECAVSGKPVPTVNWMK-NGDVVIP 355 (403)
T ss_dssp EEEEEEEEEEEEEC--CCCEECCTTCCEEECCEEEEESCCEEEEEE-TTEECCC
T ss_pred EEEEEECCCcEeec--CcceEEecCCeEEEEEEEeeccCCEEEEEE-CCEECCC
Confidence 46778889988776 666778899999999999999999999999 7766543
No 54
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=98.95 E-value=2e-09 Score=49.60 Aligned_cols=46 Identities=30% Similarity=0.569 Sum_probs=35.6
Q ss_pred CCEEeecCC--CceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEe
Q psy4606 9 PPDILNEES--SSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIII 55 (69)
Q Consensus 9 ~p~~~~~~~--~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~ 55 (69)
+|.+...+. .....+.+|+.+.|.|.+.|.|.|.+.|++ ++..+..
T Consensus 4 ~P~~~~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~-~~~~~~~ 51 (100)
T 3caf_A 4 APYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLK-NGKEFKQ 51 (100)
T ss_dssp EEEESCTTTTSCCEEEECTTCCEEEECCEEEESCCEEEEEE-TTEECCG
T ss_pred CCEeEcCccccccEEEecCCCEEEEEEEccccCCCEEEEEE-CCEEccc
Confidence 566654321 345678899999999999999999999999 7766643
No 55
>3qr2_A Basigin; CD147, EMMPRIN, immunoglobulin-like domain, beta sheet, STRU genomics, berkeley structural genomics center, BSGC, cell A; 2.30A {Homo sapiens} PDB: 3qqn_A
Probab=98.95 E-value=1.8e-09 Score=52.47 Aligned_cols=43 Identities=28% Similarity=0.465 Sum_probs=35.4
Q ss_pred EEcCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCc
Q psy4606 6 VVVPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQ 51 (69)
Q Consensus 6 V~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~ 51 (69)
...+|.+... +....+.+|+.+.|.|.+.|.|.|.+.|++ ++.
T Consensus 18 ~~~pP~~~~~--p~~~~v~~G~~v~L~C~~~g~P~p~i~W~k-~~~ 60 (137)
T 3qr2_A 18 GSHMAGFVQA--PLSQQRWVGGSVELHCEAVGSPVPEIQWWF-EGQ 60 (137)
T ss_dssp ---CCEEEEC--CCCEEEETTSCEEEEEEEECSSCCEEEEEE-EES
T ss_pred CCCCCeEEcC--CCCEEEeCCCCEEEEEEEeeecCCeEEEEE-CCC
Confidence 3478898877 677888899999999999999999999999 443
No 56
>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like protein 3, nephrin- like 2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.1
Probab=98.95 E-value=9.2e-11 Score=56.14 Aligned_cols=50 Identities=26% Similarity=0.409 Sum_probs=41.1
Q ss_pred eeEEEEcCCEEeecCCCceEEecCCCeEEEEeeEeeecCCe-EEEEeCCCcEEEe
Q psy4606 2 GYLDVVVPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPH-ITWKREDGQEIII 55 (69)
Q Consensus 2 ~~l~V~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~-~~W~~~~~~~~~~ 55 (69)
.+|.|+++|.+.. +....+.+|+.+.|.|.+.|.|.|. +.|++ ++..+..
T Consensus 7 ~~l~V~~~P~i~~---~~~~~~~~G~~v~l~C~~~g~P~p~~i~W~~-~~~~l~~ 57 (122)
T 2cry_A 7 GTLTVNGPPIISS---TQTQHALHGEKGQIKCFIRSTPPPDRIAWSW-KENVLES 57 (122)
T ss_dssp CCCCCCSSCCEEE---ECCCCCCTTSCCCCCEEECCSSCCSEEEEES-SSCEECS
T ss_pred EEEEEecCCCccC---CCeEEEecCCCEEEEEEEeecCCCcEeEEEE-CCEEccC
Confidence 4678889998866 3456678999999999999999997 99999 6766653
No 57
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=98.95 E-value=2e-09 Score=59.21 Aligned_cols=47 Identities=32% Similarity=0.531 Sum_probs=37.2
Q ss_pred cCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEe
Q psy4606 8 VPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIII 55 (69)
Q Consensus 8 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~ 55 (69)
.+|.+...+ ...+.+.+|..+.|.|.+.|.|.|.+.|++.+|..+..
T Consensus 2 ~~P~f~~~p-~~~~~~~~G~~v~l~C~~~g~p~p~v~W~k~~g~~~~~ 48 (388)
T 2v5m_A 2 KGPVFLKEP-TNRIDFSNSTGAEIECKASGNPMPEIIWIRSDGTAVGD 48 (388)
T ss_dssp EEEEEEECC-CSEEEEETTTCEEEECEEEEESCCEEEEEETTSCBCCC
T ss_pred CCCchhhCC-CceEEEEcCccEEEEEECCCCCCCEEEEEcCCCCcccc
Confidence 467777763 33466788999999999999999999999956666543
No 58
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=98.94 E-value=7.7e-09 Score=54.92 Aligned_cols=52 Identities=35% Similarity=0.705 Sum_probs=41.0
Q ss_pred eEEEEcCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEe
Q psy4606 3 YLDVVVPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIII 55 (69)
Q Consensus 3 ~l~V~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~ 55 (69)
.|.|..+|.+..........+..|+.+.|.|.+.|.|.|.+.|++ ++..+..
T Consensus 188 ~l~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~-~g~~~~~ 239 (291)
T 1qz1_A 188 QVIVNVPPTVQARQSIVNATANLGQSVTLVCDADGFPEPTMSWTK-DGEPIEN 239 (291)
T ss_dssp EEEEEEEEEEEESCSEEEEETTSCCCEEEEEEEEEESCCEEEEEE-TTEECCC
T ss_pred EEEEecCCcccccccccccccccCceEEEEEEEEEeCCCcEEEEE-CCEECcC
Confidence 466777888765433445678889999999999999999999999 7776654
No 59
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=98.94 E-value=1.8e-09 Score=59.49 Aligned_cols=50 Identities=28% Similarity=0.620 Sum_probs=42.6
Q ss_pred eeEEEEcCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEE
Q psy4606 2 GYLDVVVPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEII 54 (69)
Q Consensus 2 ~~l~V~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~ 54 (69)
..|.|..+|.+... +....+.+|+.+.|.|.+.|.|.|.+.|++ ++..+.
T Consensus 305 ~~l~V~~~p~~~~~--~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~-~g~~~~ 354 (404)
T 3p3y_A 305 ISVRVKAAPYWLDE--PKNLILAPGEDGRLVCRANGNPKPTVQWMV-NGEPLQ 354 (404)
T ss_dssp EEEEEEEEEEEEEC--CCCEEECTTCCEEEECEEEEESCCEEEEEE-TTEEGG
T ss_pred EEEEEeCCCeeecc--CCcceeecCCcEEEEEEccccCCCceEEEE-CCEecC
Confidence 46778888988776 666788899999999999999999999999 776654
No 60
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=98.93 E-value=7e-09 Score=53.20 Aligned_cols=44 Identities=30% Similarity=0.779 Sum_probs=38.4
Q ss_pred cCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEE
Q psy4606 8 VPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEII 54 (69)
Q Consensus 8 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~ 54 (69)
.+|.+... +....+.+|+.+.|.|.+.|.|.|.+.|++ ++..+.
T Consensus 5 ~pP~~~~~--p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~-~~~~~~ 48 (212)
T 2yd1_A 5 HPPEIIRK--PQNQGVRVGGVASFYCAARGDPPPSIVWRK-NGKKVS 48 (212)
T ss_dssp CCCEEEEC--CCCEEEETTSCEEEEEEEECSSCCEEEEEE-TTEECC
T ss_pred CCCEEEcC--CCceEEecCCEEEEEEEEccCCCCeEEEEE-CCEECC
Confidence 57888876 667788999999999999999999999999 777664
No 61
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=98.93 E-value=3.3e-10 Score=63.52 Aligned_cols=51 Identities=24% Similarity=0.374 Sum_probs=41.9
Q ss_pred eeEEEEcCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEE
Q psy4606 2 GYLDVVVPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEI 53 (69)
Q Consensus 2 ~~l~V~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~ 53 (69)
..|.|+++|.+...+.+....+.+|+.+.|.|.+.|.|.|.+.|++ ++..+
T Consensus 361 ~~l~V~~~P~~~~~~~p~~~~~~~g~~~~l~C~~~g~P~p~i~W~~-~g~~~ 411 (450)
T 1z7z_I 361 RELRVLYGPRLDERDCPGNWTWPENSQQTPMCQAWGNPLPELKCLK-DGTFP 411 (450)
T ss_dssp EECEEEEEEECCSTTSCSEEEEETTCEECCCCCCEEESCCEEEEEE-TTTEE
T ss_pred EEEEEecCCceeeccCCCceeEcCCCeEEEEEecccCCCCcEEEEE-CCccc
Confidence 4677888998876533467788899999999999999999999999 66533
No 62
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=98.93 E-value=1.1e-09 Score=51.68 Aligned_cols=51 Identities=20% Similarity=0.302 Sum_probs=39.0
Q ss_pred eeEEEEc-CCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEecC
Q psy4606 2 GYLDVVV-PPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIIIKE 57 (69)
Q Consensus 2 ~~l~V~~-~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~~~ 57 (69)
+.|.|.. +|.+... +....+.+|+.+.|.|.+.|. |.+.|++ ++..+....
T Consensus 11 ~~l~V~~~pp~~~~~--~~~~~v~~G~~v~l~C~~~~~--p~v~W~k-~~~~l~~~~ 62 (113)
T 2edh_A 11 AMLTVRALPIKFTEG--LRNEEATEGATAVLRCELSKM--APVEWWK-GHETLRDGD 62 (113)
T ss_dssp CCCCCCCSCCCEEEC--CCCCEECTTSCEEEEEEESSC--CCCEEEE-SSSBCCCSS
T ss_pred EEEEEEcCCCccccc--CCceEEeCCCeEEEEEEECCC--CcEEEEE-CCEECCCCC
Confidence 4677774 4577665 666788999999999999775 7899999 777665443
No 63
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=98.93 E-value=1.7e-09 Score=57.41 Aligned_cols=53 Identities=34% Similarity=0.590 Sum_probs=40.2
Q ss_pred eEEEEcCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEec
Q psy4606 3 YLDVVVPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIIIK 56 (69)
Q Consensus 3 ~l~V~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~~ 56 (69)
.|.|..+|.+...+......+.+|+.+.|.|.+.|.|.|.+.|++ ++..+...
T Consensus 186 ~~~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~-~g~~~~~~ 238 (291)
T 2wim_A 186 IVIVNVPPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFR-NGKLIEEN 238 (291)
T ss_dssp EEEEEBCCCCBCSCSEEECCSSSCCEEEEECBCCCBSCCEEEEEE-TTEECCCT
T ss_pred EEEeccCCccccCcccccceecCCCeEEEEEEeecCCCCeEEEEE-CCEECcCC
Confidence 456778887765422224457789999999999999999999999 77776543
No 64
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=98.93 E-value=1.5e-08 Score=51.00 Aligned_cols=55 Identities=20% Similarity=0.277 Sum_probs=40.7
Q ss_pred eeEEEEcCCEEeec-CCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEecC
Q psy4606 2 GYLDVVVPPDILNE-ESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIIIKE 57 (69)
Q Consensus 2 ~~l~V~~~p~~~~~-~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~~~ 57 (69)
..|.|..+|.+... +......+..|..+.|.|.+.|.|.|.+.|++ ++..+....
T Consensus 93 ~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~-~~~~~~~~~ 148 (197)
T 3lcy_A 93 SKLLLQATPQFHPGYPLKEKYYGAVGSTLRLHVMYIGRPVPAMTWFH-GQKLLQNSE 148 (197)
T ss_dssp EEEEEEEEEEECTTSCCCSEEEEETTSCEEEEEEEEEESCCEEEEEE-TTEECCCCS
T ss_pred EEEEEEcCCCCCCCccCCcceeecCCCeEEEEEEEeeeeCCeeEEeE-CCEECCCCC
Confidence 35667777765432 22345667889999999999999999999999 777665443
No 65
>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=98.93 E-value=1.1e-09 Score=52.06 Aligned_cols=49 Identities=20% Similarity=0.358 Sum_probs=35.0
Q ss_pred eEEEEcCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEecC
Q psy4606 3 YLDVVVPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIIIKE 57 (69)
Q Consensus 3 ~l~V~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~~~ 57 (69)
.|.|+++|.+... ... .......|.|.+.|.|.|.+.|+| +|+.+....
T Consensus 2 ~L~V~~pP~i~~~--~~~---~~~~~~~l~C~~~g~P~p~i~W~k-~g~~l~~~~ 50 (118)
T 1wwc_A 2 ALTVYYPPRVVSL--EEP---ELRLEHCIEFVVRGNPPPTLHWLH-NGQPLRESK 50 (118)
T ss_dssp --CCCCCCCCCCC--CCC---CCCCEEEEEEEEECSSCCEEEEEE-TTEECCCSS
T ss_pred EEEEecCCceecc--CCC---eeccceEEEEEeeeeCCCeEEEEE-CCEECCCCC
Confidence 4778889987654 211 123677899999999999999999 777765443
No 66
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=98.92 E-value=2.8e-09 Score=54.32 Aligned_cols=50 Identities=36% Similarity=0.761 Sum_probs=38.0
Q ss_pred eeEEEE-cCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEE
Q psy4606 2 GYLDVV-VPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEII 54 (69)
Q Consensus 2 ~~l~V~-~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~ 54 (69)
|.|.+. .+|.+... +....+.+|+.+.|.|.+.|.|.|.+.|++ ++..+.
T Consensus 1 g~l~~~~~pp~i~~~--p~~~~v~~G~~v~l~C~~~~~p~~~v~W~~-~~~~~~ 51 (212)
T 2v9r_A 1 GSLRQEDFPPRIVEH--PSDLIVSKGEPATLNCKAEGRPTPTIEWYK-GGERVE 51 (212)
T ss_dssp -----CCEEEEEEEC--CCCEEECTTCCEEECCEEEEESCCEEEEEE-TTEECC
T ss_pred CCcCcccCCcceecC--CCceEEeCCCcEEEEEEcCCCCCCEEEEEE-CCEEee
Confidence 345555 57777776 667889999999999999999999999999 666654
No 67
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=98.92 E-value=3.3e-09 Score=54.47 Aligned_cols=46 Identities=30% Similarity=0.727 Sum_probs=38.3
Q ss_pred EEcCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEE
Q psy4606 6 VVVPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEII 54 (69)
Q Consensus 6 V~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~ 54 (69)
+..+|.+... +....+.+|+.+.|.|.+.|.|.|.+.|++ ++..+.
T Consensus 3 ~~~~P~~~~~--p~~~~v~~G~~v~L~C~~~g~p~~~v~W~k-~~~~~~ 48 (212)
T 2yd6_A 3 GETPPRFTRT--PVDQTGVSGGVASFICQATGDPRPKIVWNK-KGKKVS 48 (212)
T ss_dssp -CEEEEEEEC--CCCEEEETTSCEEEEEEEEEESCCEEEEEE-TTEECC
T ss_pred CCCCCeEEeC--cceeEEecCCeEEEEEEEeeCCCCEEEEEE-CCcCCC
Confidence 3467888876 666788899999999999999999999999 676654
No 68
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.92 E-value=2e-09 Score=50.32 Aligned_cols=46 Identities=13% Similarity=0.285 Sum_probs=37.0
Q ss_pred cCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEecC
Q psy4606 8 VPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIIIKE 57 (69)
Q Consensus 8 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~~~ 57 (69)
.+|.+... +....+.+|+.+.|.|.+.|.|.| +.|++ ++..+....
T Consensus 7 ~~p~~~~~--~~~~~v~~G~~v~l~C~~~~~~~~-v~W~k-~g~~~~~~~ 52 (106)
T 2dlt_A 7 GQLEVLQD--IADLTVKAAEQAVFKCEVSDEKVT-GKWYK-NGVEVRPSK 52 (106)
T ss_dssp CCCCEEEC--CCCEEEESSCCEECCCEESCSSCE-EEEEE-SSCBCCCCS
T ss_pred CCCEEecC--CCCeEEeCCCeEEEEEEEcCCCcc-eEEEc-CCEECcCCC
Confidence 36677766 667888999999999999999988 99999 776665433
No 69
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=98.91 E-value=4.8e-09 Score=52.71 Aligned_cols=47 Identities=32% Similarity=0.581 Sum_probs=38.0
Q ss_pred CCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEec
Q psy4606 9 PPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIIIK 56 (69)
Q Consensus 9 ~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~~ 56 (69)
||.+...+.+....+.+|+.+.|.|.+.|.|.|.+.|++ ++..+...
T Consensus 2 pP~i~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~-~~~~~~~~ 48 (192)
T 2va4_A 2 MPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFR-NGKLIEEN 48 (192)
T ss_dssp CCEEECSCCEEEEETTSCCCEEEECEEECSSCCEEEEEE-TTEECCCS
T ss_pred CCcccCCCCCcEEEEecCCCEEEEEeeccCCCCeEEEEE-CCeEcCCC
Confidence 677766544556788899999999999999999999999 77766543
No 70
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=98.90 E-value=3.9e-09 Score=58.08 Aligned_cols=50 Identities=24% Similarity=0.586 Sum_probs=42.2
Q ss_pred eeEEEEcCCEEeecCCCce-EEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEE
Q psy4606 2 GYLDVVVPPDILNEESSSD-IMAPEGGTIKLVCKAKGYPRPHITWKREDGQEII 54 (69)
Q Consensus 2 ~~l~V~~~p~~~~~~~~~~-~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~ 54 (69)
..|.|..+|.+... +.. ..+..|+.+.|.|.+.|.|.|.+.|++ ++..+.
T Consensus 301 ~~l~V~~~P~~~~~--~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~-~g~~~~ 351 (395)
T 1bih_A 301 LKLTVVSAPKYEQK--PEKVIVVKQGQDVTIPCKVTGLPAPNVVWSH-NAKPLS 351 (395)
T ss_dssp EEEEEEEEEEEEEC--CCSEEEECTTSCEEEECEEEEESCCCCEEEE-TTEECC
T ss_pred EEEEEEcCCccccC--CCcceEecCCCeEEEEEEECcccCCeeEEEE-CCEECC
Confidence 46888899998876 444 678899999999999999999999999 777654
No 71
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=98.90 E-value=2.2e-09 Score=59.45 Aligned_cols=44 Identities=41% Similarity=0.823 Sum_probs=33.3
Q ss_pred CCEEeecCCCceEEe---cCCCeEEEEeeEeeecCCeEEEEeCCCcEEEe
Q psy4606 9 PPDILNEESSSDIMA---PEGGTIKLVCKAKGYPRPHITWKREDGQEIII 55 (69)
Q Consensus 9 ~p~~~~~~~~~~~~~---~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~ 55 (69)
+|.+... +..... .+|+.+.|.|.+.|.|.|.++|+| +|..+..
T Consensus 5 ~P~f~~~--P~~~~~~~~~eg~~v~L~C~~~g~P~p~i~W~k-~g~~l~~ 51 (384)
T 3kld_A 5 GPVFVQE--PSHVMFPLDSEEKKVKLSCEVKGNPKPHIRWKL-NGTDVDI 51 (384)
T ss_dssp EEEEEEC--CCCEEEETTCSCSEEEECCEEEEESCCEEEEEE-TTEECCC
T ss_pred CCEEEeC--CcceEeecCCCCCeEEEEeEecCCCCCEEEEEE-CCEECcC
Confidence 3555555 333333 478999999999999999999999 7877654
No 72
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=98.90 E-value=5.5e-09 Score=57.48 Aligned_cols=51 Identities=27% Similarity=0.546 Sum_probs=42.3
Q ss_pred eeEEEEcCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEe
Q psy4606 2 GYLDVVVPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIII 55 (69)
Q Consensus 2 ~~l~V~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~ 55 (69)
+.|.|+.+|.+... .....+..|+.+.|.|.+.|.|.|.+.|++ ++..+..
T Consensus 93 ~~l~V~~~P~~~~~--~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~-~g~~l~~ 143 (389)
T 2jll_A 93 MYLDIEYAPKFISN--QTIYYSWEGNPINISCDVKSNPPASIHWRR-DKLVLPA 143 (389)
T ss_dssp EEEEEEEEEEECCS--CCEEEECTTCCEEEEECEEEESCCEEEEEE-TTEESSC
T ss_pred EEEEEEeCCEEecC--cceEEeccCCEEEEEEEEEecCCCeEEEEE-CCccCCc
Confidence 57888899988764 444567899999999999999999999999 7766643
No 73
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=98.89 E-value=1e-08 Score=51.77 Aligned_cols=45 Identities=33% Similarity=0.680 Sum_probs=38.1
Q ss_pred cCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEe
Q psy4606 8 VPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIII 55 (69)
Q Consensus 8 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~ 55 (69)
.+|.+... +....+.+|+.+.|.|.+.|.|.|.+.|++ ++..+..
T Consensus 3 ~~P~~~~~--~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~-~~~~~~~ 47 (197)
T 2j8h_A 3 MAPHFKEE--LRNLNVRYQSNATLVCKVTGHPKPIVKWYR-QGKEIIA 47 (197)
T ss_dssp CCCEEEEC--CCCEEEETTSCEEEEEEEECSSCCEEEEEE-TTEECCC
T ss_pred CCCEEEEc--CCccEEcCCCEEEEEEEEeecCCCEEEEEE-CCEECcc
Confidence 47888776 667888999999999999999999999999 7766654
No 74
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=98.89 E-value=4.9e-09 Score=57.71 Aligned_cols=50 Identities=22% Similarity=0.406 Sum_probs=40.1
Q ss_pred EEEEcCCEEeecCCCceEEecCCCeEEEEeeEee-ecCCeEEEEeCCCcEEEec
Q psy4606 4 LDVVVPPDILNEESSSDIMAPEGGTIKLVCKAKG-YPRPHITWKREDGQEIIIK 56 (69)
Q Consensus 4 l~V~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~P~P~~~W~~~~~~~~~~~ 56 (69)
|.|..+|.+... +....+.+|+.+.|.|.+.| .|.|.+.|++ +|..+...
T Consensus 1 l~v~~~P~~~~~--p~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k-~g~~~~~~ 51 (395)
T 1bih_A 1 LPVDKYPVLKDQ--PAEVLFRENNPTVLECIIEGNDQGVKYSWKK-DGKSYNWQ 51 (395)
T ss_dssp ----CCCEECCC--CSEEEEETTSCEEECCCEESCCSSCEEEEEE-SSSBCCTT
T ss_pred CCcCCCCEeecC--CCceEEeCCCEEEEEEEEecCCCCceEEEEE-CCcCcccc
Confidence 467889999877 77788899999999999999 9999999999 77766543
No 75
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.89 E-value=2.6e-09 Score=49.57 Aligned_cols=45 Identities=20% Similarity=0.406 Sum_probs=36.1
Q ss_pred cCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEec
Q psy4606 8 VPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIIIK 56 (69)
Q Consensus 8 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~~ 56 (69)
.||.+... +....+.+|+.+.|.|.+.| |.|.+.|++ ++..+...
T Consensus 7 ~pp~~~~~--~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k-~g~~~~~~ 51 (103)
T 2edf_A 7 GPAAIIKP--LEDQWVAPGEDVELRCELSR-AGTPVHWLK-DRKAIRKS 51 (103)
T ss_dssp CCCCEEEC--CCCEEECTTSCEEECCEESS-SSCCCCEEE-SSCBCCCS
T ss_pred CCcEEEec--CCccEEcCCCCEEEEEEEeC-CCCcEEEEE-CCEEccCC
Confidence 45666665 66688899999999999998 889999999 77666443
No 76
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=98.89 E-value=2.4e-09 Score=56.60 Aligned_cols=48 Identities=25% Similarity=0.449 Sum_probs=39.4
Q ss_pred eEEEEcCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCc
Q psy4606 3 YLDVVVPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQ 51 (69)
Q Consensus 3 ~l~V~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~ 51 (69)
.|.|..+|.+.....+....+.+|+.+.|.|.+.|.|.|.+.|++ ++.
T Consensus 177 ~l~V~~~p~~~~~~~p~~~~v~~g~~~~l~C~~~g~P~p~i~W~~-~~~ 224 (265)
T 2oz4_A 177 ELRVLYGPRLDERDCPGNWTWPENSQQTPMCQAWGNPLPELKCLK-DGT 224 (265)
T ss_dssp EEEEEEEEECCGGGSCSEEEEETTCEECCCCCCEEESCCEEEEEE-TTT
T ss_pred EEEEEeCCccccccCCCccEEcCCCeEEEEeECccCCCCeEEEEE-CCc
Confidence 577888888765433456778899999999999999999999999 555
No 77
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=98.88 E-value=3.5e-08 Score=52.30 Aligned_cols=52 Identities=23% Similarity=0.446 Sum_probs=41.9
Q ss_pred eeEEEEcCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEe
Q psy4606 2 GYLDVVVPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIII 55 (69)
Q Consensus 2 ~~l~V~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~ 55 (69)
+.|.|..+|.+.... .....+.+|..+.|.|.+.|.|.|.+.|++ ++..+..
T Consensus 91 ~~l~V~~~p~~~~~~-~~~~~v~~g~~~~l~C~~~g~p~~~v~W~~-~~~~~~~ 142 (284)
T 2rik_A 91 AQLGVQEPPRFIKKL-EPSRIVKQDEHTRYECKIGGSPEIKVLWYK-DETEIQE 142 (284)
T ss_dssp EEEEEECCCEEEECC-CSEEEEETTCCEEEEEEEESSSCCEEEEEE-TTEECCC
T ss_pred EEEEccCCCcccccC-CCceEecCCceEEEEEEEeeeCCCEEEEEE-CCEECcC
Confidence 467888899877652 445567899999999999999999999999 7766543
No 78
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.88 E-value=1.8e-09 Score=50.03 Aligned_cols=45 Identities=16% Similarity=0.298 Sum_probs=36.3
Q ss_pred cCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEec
Q psy4606 8 VPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIIIK 56 (69)
Q Consensus 8 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~~ 56 (69)
.+|.+... +....+.+|+.+.|.|.+.|.| |.+.|++ ++..+...
T Consensus 7 ~p~~~~~~--~~~~~v~~G~~v~l~C~~~~~~-~~v~W~k-~g~~i~~~ 51 (101)
T 2edk_A 7 GPVLIVTP--LEDQQVFVGDRVEMAVEVSEEG-AQVMWMK-NGVELTRE 51 (101)
T ss_dssp CCCCEEEC--CCCEEEESSCCCBCCEEESCSS-CCCEEEE-SSCBCCCS
T ss_pred CCCEEEec--CCceEEcCCCCEEEEEEEeCCC-CEEEEEE-CCEECCCC
Confidence 35666665 6668889999999999999999 9999999 77766543
No 79
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.87 E-value=9.5e-09 Score=51.56 Aligned_cols=44 Identities=27% Similarity=0.480 Sum_probs=38.2
Q ss_pred eeEEEEcCCEEeecCCCceEEecCCCeEEEEeeEeeec-CCeEEEEe
Q psy4606 2 GYLDVVVPPDILNEESSSDIMAPEGGTIKLVCKAKGYP-RPHITWKR 47 (69)
Q Consensus 2 ~~l~V~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P-~P~~~W~~ 47 (69)
..|.|+.+|.+... +....+.+|+.+.|.|.+.|.| .|.+.|++
T Consensus 76 ~~l~V~~~P~~~~~--~~~~~~~~g~~~~l~C~~~g~p~~~~i~W~~ 120 (184)
T 3b5h_A 76 ANIQLHGPPRVKAV--KSSEHINEGETAMLVCKSESVPPVTDWAWYK 120 (184)
T ss_dssp EEEEECCSCCCEES--CSEEEECTTSCEEEEEECCCSSCCCEEEEEE
T ss_pred EEEEEecCCceeec--CCCcEEcCCCcEEEEEEECCCCCCCeEEEEE
Confidence 46888899988776 5566788999999999999999 89999999
No 80
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=98.87 E-value=4e-09 Score=53.06 Aligned_cols=46 Identities=24% Similarity=0.473 Sum_probs=37.5
Q ss_pred EcCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEe
Q psy4606 7 VVPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIII 55 (69)
Q Consensus 7 ~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~ 55 (69)
..+|.+... +....+.+|+.+.|.|.+.|.|.|.+.|++ ++..+..
T Consensus 5 ~~~P~i~~~--~~~~~~~~G~~v~l~C~~~~~p~~~i~W~~-~~~~~~~ 50 (192)
T 2iep_A 5 PKAPVITTP--LETVDALVEEVATFMCAVESYPQPEISWTR-NKILIKL 50 (192)
T ss_dssp CEEEEESSC--CCEEEEETTSCEEEECCEEEESCCEEEEEE-TTEECCT
T ss_pred CCCceeecC--ccceeeeCCCcEEEEeeCCCCCCCeEEEEE-CCEEccc
Confidence 356777665 666788899999999999999999999999 6766543
No 81
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=98.87 E-value=3.8e-08 Score=50.80 Aligned_cols=44 Identities=27% Similarity=0.440 Sum_probs=35.7
Q ss_pred CEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEec
Q psy4606 10 PDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIIIK 56 (69)
Q Consensus 10 p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~~ 56 (69)
|.+... +....+..|..+.|.|.+.|.|.|.+.|++ ++..+...
T Consensus 119 p~~~~~--~~~~~v~~G~~v~L~C~~~g~p~~~v~W~~-~~~~~~~~ 162 (218)
T 3k0w_A 119 LQICVE--PTSQKLMPGSTLVLQCVAVGSPIPHYQWFK-NELPLTHE 162 (218)
T ss_dssp CEEEEC--CCCEEECTTCCEEEECEEEBSSCCEEEEEE-TTEECTTC
T ss_pred ceEEEC--CCceeecCCCcEEEEEEecccCCCeEEEEE-CCEECCCC
Confidence 566555 556778899999999999999999999999 77666433
No 82
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=98.87 E-value=1.2e-08 Score=51.88 Aligned_cols=31 Identities=29% Similarity=0.963 Sum_probs=26.5
Q ss_pred cCCCeEEEEeeEe-eecCCeEEEEeCCCcEEEe
Q psy4606 24 PEGGTIKLVCKAK-GYPRPHITWKREDGQEIII 55 (69)
Q Consensus 24 ~~g~~~~l~C~~~-g~P~P~~~W~~~~~~~~~~ 55 (69)
..|+.+.|.|.+. |.|.|.++|++ +|+.+..
T Consensus 119 ~~g~~~~l~C~~~~g~P~p~i~W~k-~g~~l~~ 150 (201)
T 1dr9_A 119 PTSNIRRIICSTSGGFPEPHLSWLE-NGEELNA 150 (201)
T ss_dssp SSTTEEEEEEEEEEESSCEEEEEEE-SSCEECC
T ss_pred CCCCeEEEEEecCCccCCCEEEEEE-CCEECcc
Confidence 4588899999995 89999999999 7877654
No 83
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=98.86 E-value=9.3e-09 Score=59.52 Aligned_cols=54 Identities=19% Similarity=0.212 Sum_probs=41.4
Q ss_pred eeEEEEcCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEec
Q psy4606 2 GYLDVVVPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIIIK 56 (69)
Q Consensus 2 ~~l~V~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~~ 56 (69)
+.|.|..+|.+...+......+.+|+.+.|.|.+.|.|.|.+.|+| +|+.+...
T Consensus 317 ~~L~V~~~p~i~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~k-~g~~l~~~ 370 (527)
T 3qs9_E 317 ALVTIVEKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTF-SRKSFPCE 370 (527)
T ss_dssp EEEEEC--CEEECCCSCCEECCCTTCCCCEEEEEEEESCCEEEEEE-TTEEEECB
T ss_pred EEEEEEccCccccccCcccEEEcCCCeEEEEEEEEecCCCEEEEEE-CCEECcCC
Confidence 4678888887765432345667889999999999999999999999 88877543
No 84
>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.86 E-value=5.5e-09 Score=49.91 Aligned_cols=44 Identities=16% Similarity=0.226 Sum_probs=36.4
Q ss_pred CCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEecC
Q psy4606 9 PPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIIIKE 57 (69)
Q Consensus 9 ~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~~~ 57 (69)
+|.+... ..+..+.+|+.+.|.|.+.+ .|.+.|+| ||+.+..+.
T Consensus 8 ~~~~~~~--l~d~~v~eG~~a~f~C~vs~--~p~v~W~k-nG~~l~~~~ 51 (112)
T 2e6q_A 8 TARLVAG--LEDVQVYDGEDAVFSLDLST--IIQGTWFL-NGEELKSNE 51 (112)
T ss_dssp CCCEEEC--CCCEEEETTCEEEEEEEESS--CCCCEEEE-SSCBCCSSC
T ss_pred CcEEecC--CCCeEEcCCCcEEEEEEECC--CCeEEEEE-CCEECccCc
Confidence 3566665 77888999999999999998 88899999 888886554
No 85
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.86 E-value=2.1e-09 Score=49.95 Aligned_cols=45 Identities=22% Similarity=0.391 Sum_probs=34.8
Q ss_pred cCCEEeecCCCce---EEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEec
Q psy4606 8 VPPDILNEESSSD---IMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIIIK 56 (69)
Q Consensus 8 ~~p~~~~~~~~~~---~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~~ 56 (69)
.+|.+... +.. +.+.+|+.+.|.|.+.|.|.| +.|++ +++.+...
T Consensus 6 ~~P~~~~~--p~~~~~~~v~~G~~v~l~C~~~~~p~~-v~W~k-~g~~~~~~ 53 (104)
T 2e6p_A 6 SGPVHILS--PQDKVSLTFTTSERVVLTCELSRVDFP-ATWYK-DGQKVEES 53 (104)
T ss_dssp SSSCCCCB--CCSCEEEEEESSSCEECCEECSSTTCC-CEEEE-TTEECCCB
T ss_pred CCCCEEEC--CCCCccEEEeCCCcEEEEEEecCCCCc-cEEee-CCEECCCC
Confidence 35655554 333 678899999999999999999 99999 77766543
No 86
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=98.86 E-value=9.5e-09 Score=52.67 Aligned_cols=45 Identities=29% Similarity=0.691 Sum_probs=38.4
Q ss_pred cCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEe
Q psy4606 8 VPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIII 55 (69)
Q Consensus 8 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~ 55 (69)
.+|.+... +....+.+|+.+.|.|.+.|.|.|.+.|++ ++..+..
T Consensus 8 ~~P~i~~~--p~~~~v~~G~~v~L~C~~~g~p~~~v~W~~-~g~~~~~ 52 (217)
T 2vr9_A 8 QSPRIIEH--PTDLVVKKNEPATLNCKVEGKPEPTIEWFK-DGEPVST 52 (217)
T ss_dssp CCCEEEEC--CCCEEECTTSCEEECCEEECSSCCEEEEEE-TTEECCC
T ss_pred CCCEEecC--CCceEEeCCCcEEEEEEcCCCCCCeEEEEE-CCcCccC
Confidence 57888776 667889999999999999999999999999 7766643
No 87
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=98.86 E-value=1.9e-08 Score=51.61 Aligned_cols=50 Identities=28% Similarity=0.402 Sum_probs=38.0
Q ss_pred eEEEEcC-------CEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEe
Q psy4606 3 YLDVVVP-------PDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIII 55 (69)
Q Consensus 3 ~l~V~~~-------p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~ 55 (69)
.|.|..+ |.+... +....+..|+.+.|.|.+.|.|.|.+.|++ ++..+..
T Consensus 95 ~l~V~~~~~~~~~~p~~~~~--~~~~~~~~g~~v~l~C~~~g~p~p~v~W~~-~g~~l~~ 151 (212)
T 2yd6_A 95 RLTVLREDQIPRGFPTIDMG--PQLKVVERTRTATMLCAASGNPDPEITWFK-DFLPVDT 151 (212)
T ss_dssp EEEEECGGGCCTTCCEEEEC--CCCEEEETTSCEEEEEEEECSSCCEEEEEE-TTEEC--
T ss_pred EEEEeccCccCCCcceeecC--CcceeEecCCCEEEEEEecCCCCCeEEEEE-CCccccC
Confidence 4666643 666654 555677889999999999999999999999 7766643
No 88
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=98.85 E-value=7e-09 Score=47.58 Aligned_cols=44 Identities=11% Similarity=0.312 Sum_probs=35.2
Q ss_pred CEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEecC
Q psy4606 10 PDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIIIKE 57 (69)
Q Consensus 10 p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~~~ 57 (69)
|.+... +....+.+|+.+.|.|.+ +.|.|.+.|++ ++..+....
T Consensus 9 ~~~~~~--~~~~~v~~G~~v~l~C~~-~~p~~~v~W~k-~~~~l~~~~ 52 (95)
T 2k1m_A 9 SAFSKK--PRSVEVAAGSPAVFEAET-ERAGVKVRWQR-GGSDISASN 52 (95)
T ss_dssp CCCSBC--CCCEEEETTSCEEEEEEC-SSSSCCCEEEC-SSSEECSST
T ss_pred CeeEeC--CCcEEEeCCCcEEEEEEe-CCCCCeEEEEE-CCEECCCCC
Confidence 455544 567788999999999999 88999999999 777765443
No 89
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=98.85 E-value=1.5e-09 Score=53.56 Aligned_cols=32 Identities=22% Similarity=0.536 Sum_probs=29.2
Q ss_pred CceEEecCCCeEEEEeeEeeecCCeEEEEeCCC
Q psy4606 18 SSDIMAPEGGTIKLVCKAKGYPRPHITWKREDG 50 (69)
Q Consensus 18 ~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~ 50 (69)
+..+.+..|+.+.|.|.+.|.|.|.++|+| ++
T Consensus 25 p~~~~v~~G~~v~L~C~~~G~P~P~i~W~k-~g 56 (139)
T 1gxe_A 25 PDTIVVVAGNKLRLDVPISGDPAPTVIWQK-AI 56 (139)
T ss_dssp CCEEEESSSSCCCCEEECCSBSCCEEEEEE-EC
T ss_pred CCCEEEeCCCeEEEEEEEEEcCCCeEEEEE-CC
Confidence 567889999999999999999999999999 45
No 90
>2dku_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.84 E-value=5.3e-09 Score=48.50 Aligned_cols=45 Identities=22% Similarity=0.391 Sum_probs=35.9
Q ss_pred cCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEec
Q psy4606 8 VPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIIIK 56 (69)
Q Consensus 8 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~~ 56 (69)
.+|.+... +....+.+|+.+.|.|. .|.|.|.+.|++ ++..+...
T Consensus 7 ~pp~~~~~--~~~~~v~~G~~v~l~C~-~~~p~~~v~W~k-~~~~l~~~ 51 (103)
T 2dku_A 7 GANCFTEE--LTNLQVEEKGTAVFTCK-TEHPAATVTWRK-GLLELRAS 51 (103)
T ss_dssp CCCCCSSC--CCCEEEETTSEEEEEEE-CSSCCSCCEEEE-SSCBCCSS
T ss_pred CCCEeEec--CCcEEEeCCCcEEEEEE-eCCCCCeEEEEe-CCEECCCC
Confidence 35666655 66788899999999999 589999999999 67666543
No 91
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=98.84 E-value=1.3e-08 Score=47.05 Aligned_cols=47 Identities=19% Similarity=0.381 Sum_probs=35.4
Q ss_pred cCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEecC
Q psy4606 8 VPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIIIKE 57 (69)
Q Consensus 8 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~~~ 57 (69)
.+|.+...+ .....+.+|+.+.|.|.+. .|.|.+.|++ ++..+....
T Consensus 6 ~~p~~~~~~-~~~~~v~~G~~v~l~C~~~-~p~~~v~W~k-~g~~i~~~~ 52 (100)
T 2yuv_A 6 SGAAFAKIL-DPAYQVDKGGRVRFVVELA-DPKLEVKWYK-NGQEIRPST 52 (100)
T ss_dssp SSCCEEECC-CSCEEECTTEEEEEEEEES-CTTSCEEEEE-SSCBCCCBT
T ss_pred CCCeEEecC-CCccEEcCCCcEEEEEEec-CCCceEEEEE-CCEECCCCC
Confidence 367776652 2236788999999999998 7999999999 776664433
No 92
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=98.84 E-value=6.7e-09 Score=48.68 Aligned_cols=46 Identities=17% Similarity=0.351 Sum_probs=36.2
Q ss_pred cCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEec
Q psy4606 8 VPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIIIK 56 (69)
Q Consensus 8 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~~ 56 (69)
.+|.+...+ +....+.+|+.+.|.|.+ +.|.|.+.|++ +|..+..+
T Consensus 14 ~~p~f~~~~-~~~~~v~~G~~v~L~C~~-~~p~~~v~W~k-~g~~l~~~ 59 (104)
T 1pd6_A 14 KSTAFQKKL-EPAYQVSKGHKIRLTVEL-ADHDAEVKWLK-NGQEIQMS 59 (104)
T ss_dssp TTSSCSEEC-CSEEEEETTSCEEEEEEC-SSSSSCCEEEE-SSSEECCC
T ss_pred CCCEEEEcC-CCcEEEecCCCEEEEEEE-cCCCCEEEEEE-CCEECCCC
Confidence 456666552 444778899999999999 79999999999 78777654
No 93
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=98.84 E-value=1.9e-08 Score=53.77 Aligned_cols=45 Identities=33% Similarity=0.680 Sum_probs=38.4
Q ss_pred cCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEe
Q psy4606 8 VPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIII 55 (69)
Q Consensus 8 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~ 55 (69)
.+|.+... +....+.+|+.+.|.|.+.|.|.|.+.|++ ++..+..
T Consensus 3 ~~P~~~~~--p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~-~~~~~~~ 47 (305)
T 2nzi_A 3 MAPHFKEE--LRNLNVRYQSNATLVCKVTGHPKPIVKWYR-QGKEIIA 47 (305)
T ss_dssp CCCEEEEC--CCCEEECTTCCEEEEEEEECSSCCEEEEEE-TTEECCC
T ss_pred CCCeeeec--ccceEEeCCCcEEEEEEEeCCCCCeEEEEE-CCEEccc
Confidence 47888776 667889999999999999999999999999 7766543
No 94
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.83 E-value=1.9e-09 Score=50.50 Aligned_cols=50 Identities=12% Similarity=0.134 Sum_probs=37.4
Q ss_pred EEc-CCEEeecCCCceEEecCCCeEEEEeeEeeecC-CeEEEEeCCCcEEEecCC
Q psy4606 6 VVV-PPDILNEESSSDIMAPEGGTIKLVCKAKGYPR-PHITWKREDGQEIIIKEG 58 (69)
Q Consensus 6 V~~-~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~-P~~~W~~~~~~~~~~~~~ 58 (69)
|.. ++.+... +....+.+|+.+.|.|.+.|.|. |.+.|+| +|..+....+
T Consensus 4 V~~~p~~~~~~--~~~~~v~~G~~v~l~C~v~~~~~~~~v~W~k-~g~~i~~~~r 55 (104)
T 2eny_A 4 GSSGHVGITKR--LKTMEVLEGESCSFECVLSHESASDPAMWTV-GGKTVGSSSR 55 (104)
T ss_dssp CCCCCCCCSBC--CCCEEEESSCCEEEEEECSSCCCSSCBCCBS-SSSBCSBCSS
T ss_pred cccCCCEEEec--CCCcEEcCCCcEEEEEEEcCCCCCceeEEEE-CCEECCCCCC
Confidence 443 3455554 66788999999999999999875 4899999 7777654443
No 95
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=98.83 E-value=2.8e-08 Score=56.77 Aligned_cols=55 Identities=18% Similarity=0.281 Sum_probs=43.3
Q ss_pred eeEEEEcCCEEeecCC-CceEEecCCCeEEEEeeEeeecCCe-EEEEeCCCcEEEecC
Q psy4606 2 GYLDVVVPPDILNEES-SSDIMAPEGGTIKLVCKAKGYPRPH-ITWKREDGQEIIIKE 57 (69)
Q Consensus 2 ~~l~V~~~p~~~~~~~-~~~~~~~~g~~~~l~C~~~g~P~P~-~~W~~~~~~~~~~~~ 57 (69)
..|.|..+|.+...+. .....+.+|+.+.|.|.+.|.|.|. +.|++ ++..+....
T Consensus 303 ~~l~V~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~~v~W~k-~g~~~~~~~ 359 (524)
T 2ec8_A 303 TTLEVVDKGFINIFPMINTTVFVNDGENVDLIVEYEAFPKPEHQQWIY-MNRTFTDKW 359 (524)
T ss_dssp EEEEEESSCEEEEEESSCSEEEECTTCCEEEEEEEEEESCCCEEEEES-SSCBCSSSB
T ss_pred EEEEEeccCceEeecCCCceEEEcCCCcEEEEEEEeecCCCcEEEEEE-CCeeccCCc
Confidence 4688888998765421 2357889999999999999999999 99999 676665433
No 96
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=98.83 E-value=2.1e-08 Score=53.27 Aligned_cols=48 Identities=21% Similarity=0.388 Sum_probs=39.7
Q ss_pred eEEEEcCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEE
Q psy4606 3 YLDVVVPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEI 53 (69)
Q Consensus 3 ~l~V~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~ 53 (69)
.|.|..+|.+... +....+.+|+.+.|.|.+.|.|.|.+.|++ ++..+
T Consensus 94 ~l~v~~~~~~~~~--~~~~~~~~g~~v~l~C~~~~~p~~~v~W~~-~~~~~ 141 (291)
T 1qz1_A 94 NVKIFQKLMFKNA--PTPQEFKEGEDAVIVCDVVSSLPPTIIWKH-KGRDV 141 (291)
T ss_dssp EEEEECCSEEEEC--CSSEEEETTSCEEECCEEECSSCCEEEEEE-TTSCS
T ss_pred EEEeeccccccCC--CCcccccCCCeEEEEEEeccCCCCEEEEEE-CCEEc
Confidence 4667778887766 556778899999999999999999999999 66554
No 97
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=98.83 E-value=5.4e-09 Score=48.57 Aligned_cols=43 Identities=23% Similarity=0.455 Sum_probs=34.1
Q ss_pred EEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEecC
Q psy4606 11 DILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIIIKE 57 (69)
Q Consensus 11 ~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~~~ 57 (69)
.+... +..+.+.+|+.+.|.|.+.| |.|.+.|+| ++..+....
T Consensus 9 ~~~~~--~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k-~g~~l~~~~ 51 (103)
T 1x44_A 9 MVTKQ--LEDTTAYCGERVELECEVSE-DDANVKWFK-NGEEIIPGP 51 (103)
T ss_dssp CCSBC--CCCEEEETTEEEEEEEECSS-SSCCCEEEE-TTEECCCST
T ss_pred eeecc--CCCEEEECCCCEEEEEEecC-CCCeEEEEE-CCEECCCCC
Confidence 35544 66678889999999999988 779999999 777765443
No 98
>2ens_A Advanced glycosylation END product-specific receptor; beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.83 E-value=1.5e-09 Score=49.93 Aligned_cols=43 Identities=28% Similarity=0.611 Sum_probs=34.5
Q ss_pred CCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEE
Q psy4606 9 PPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEII 54 (69)
Q Consensus 9 ~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~ 54 (69)
+|.+... +....+.+|+.+.|.|.+.|.|.|.+.|++ ++..+.
T Consensus 10 ~~~i~~~--p~~~~v~~G~~v~l~C~~~g~p~~~v~W~k-~~~~~~ 52 (96)
T 2ens_A 10 EVQLVVE--PEGGAVAPGGTVTLTCEVPAQPSPQIHWMK-DGVPLP 52 (96)
T ss_dssp SCCCEEE--STTSEECTTCEEEEECCCSSCSSCCCCCEE-SSSBCS
T ss_pred CCEEEEC--CCCCEEcCCCeEEEEEEEccCCCCEEEEEE-CCEECc
Confidence 4555555 555678899999999999999999999999 676654
No 99
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=98.82 E-value=9.3e-09 Score=48.21 Aligned_cols=38 Identities=18% Similarity=0.345 Sum_probs=31.3
Q ss_pred CEEeecCCCceEEecCCCeEEEEeeEeeecC---CeEEEEeCCC
Q psy4606 10 PDILNEESSSDIMAPEGGTIKLVCKAKGYPR---PHITWKREDG 50 (69)
Q Consensus 10 p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~---P~~~W~~~~~ 50 (69)
|.+... +..+.+.+|+.+.|.|.+.|.|. |.+.|+| ++
T Consensus 5 p~f~~~--p~~~~v~~G~~v~L~C~~~g~p~~~~p~v~W~k-~~ 45 (108)
T 3cx2_A 5 GLFVMR--PQDGEVTVGGSITFSARVAGASLLKPPVVKWFK-GK 45 (108)
T ss_dssp CSCSBC--CCCEEEETTCCEEEEEEEECC-CCSCCEEEEEE-TT
T ss_pred cEEEeC--CCcEEEeCCCCEEEEEEECCCccCCCcEEEEcc-CC
Confidence 555555 66788899999999999999998 9999999 54
No 100
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=98.80 E-value=1.2e-08 Score=49.71 Aligned_cols=33 Identities=18% Similarity=0.254 Sum_probs=28.3
Q ss_pred CCCeEEEEeeEeeecCCeEEEEeCCCcEEEecCC
Q psy4606 25 EGGTIKLVCKAKGYPRPHITWKREDGQEIIIKEG 58 (69)
Q Consensus 25 ~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~~~~ 58 (69)
.+..+.|.|.+.|.|.|.++|+| +|+.+.....
T Consensus 14 ~~~~~~l~c~v~G~P~P~I~W~k-nG~~l~~~~~ 46 (126)
T 1he7_A 14 EMHHWCIPFSVDGQPAPSLRWLF-NGSVLNETSF 46 (126)
T ss_dssp CCCEEEEEEEECCSSCCEEEEEE-TTEECCCCSS
T ss_pred cCccEEEEEEEeeeCCCeEEEEE-CCEECCCCCc
Confidence 57789999999999999999999 8888765443
No 101
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=98.80 E-value=9.2e-09 Score=53.26 Aligned_cols=50 Identities=28% Similarity=0.612 Sum_probs=34.5
Q ss_pred eEEEEcCCEEeecCCCceEEecCCCeEEEEeeEee-ecCCeEEEEeCCCcEEE
Q psy4606 3 YLDVVVPPDILNEESSSDIMAPEGGTIKLVCKAKG-YPRPHITWKREDGQEII 54 (69)
Q Consensus 3 ~l~V~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~P~P~~~W~~~~~~~~~ 54 (69)
.+.+..++..... ........|..+.+.|.+.| .|.|.++|++.++..+.
T Consensus 112 ~v~~~~~~~~~~~--~~~~~~~~g~~v~l~c~~~g~~P~p~i~W~k~~~~~~~ 162 (226)
T 4f80_A 112 LVELKVAALGSDL--HVDVKGYKDGGIHLECRSTGWYPQPQIQWSNNKGENIP 162 (226)
T ss_dssp EEEEEEEBCCCCC--EEEEEEEETTEEEEEEEEEEEBSCCEEEEECTTSCBCC
T ss_pred EEEEeeccceecc--cceeeeccCCceeeEEEeccCCCCCEEEEEECCceEcC
Confidence 3444443333322 44556778999999999998 69999999985555543
No 102
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=98.80 E-value=4.5e-08 Score=49.86 Aligned_cols=48 Identities=19% Similarity=0.499 Sum_probs=37.0
Q ss_pred CCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEecCC
Q psy4606 9 PPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIIIKEG 58 (69)
Q Consensus 9 ~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~~~~ 58 (69)
.|.+... .+....+..|+.+.|.|.+.|.|.|.+.|++ ++..+....+
T Consensus 116 ~p~~~~~-~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~-~~~~~~~~~~ 163 (212)
T 2r15_A 116 RARVLGG-LPDVVTIQEGKALNLTCNVWGDPPPEVSWLK-NEKALAQTDH 163 (212)
T ss_dssp SCEEEEB-CCSEEEEETTCCEEEEEEEECSSCCEEEEEE-TTEEECCCSS
T ss_pred CCccccc-CCCcEEEccCCeEEEEEEEcCCCCceEEEEE-CCeECccCCC
Confidence 3444433 1556778899999999999999999999999 7877765443
No 103
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=98.78 E-value=1.2e-08 Score=60.83 Aligned_cols=46 Identities=33% Similarity=0.554 Sum_probs=37.0
Q ss_pred CCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEe
Q psy4606 9 PPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIII 55 (69)
Q Consensus 9 ~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~ 55 (69)
+|.+...+ ...+.+..|..+.|.|.|.|.|.|.+.|+|+||..+..
T Consensus 38 ~P~~~~~p-~~~~~~~~g~~~~l~C~a~g~p~p~~~W~k~~g~~~~~ 83 (816)
T 3dmk_A 38 GPVFLKEP-TNRIDFSNSTGAEIECKASGNPMPEIIWIRSDGTAVGD 83 (816)
T ss_dssp EEEEEECC-CSEEEEETTTCEEEECEEEEESCCEEEEEETTSCBCCC
T ss_pred CCcEEeCC-CCeEEEECCCCeEEEeeecCCCCCEEEEEeCCCCCccC
Confidence 47777763 34466888999999999999999999999966766643
No 104
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=98.78 E-value=2.6e-08 Score=53.41 Aligned_cols=45 Identities=33% Similarity=0.837 Sum_probs=34.0
Q ss_pred EcCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEE
Q psy4606 7 VVPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEII 54 (69)
Q Consensus 7 ~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~ 54 (69)
..+|.+... +....+.+|+.+.|.|.+.|.|.|.+.|++ ++..+.
T Consensus 4 ~~~P~~~~~--p~~~~v~~G~~v~l~C~~~g~p~~~i~W~k-~g~~i~ 48 (304)
T 2yd9_A 4 EEPPRFIKE--PKDQIGVSGGVASFVCQATGDPKPRVTWNK-KGKKVN 48 (304)
T ss_dssp CCCCEEEEC--CCCEEEETTSCEEEEEEEECSSCCEEEEC--------
T ss_pred ccCCeeeec--CCceEecCCCeEEEEEEEEEeCCCeEEEEE-CCEECC
Confidence 468888876 667788899999999999999999999999 666553
No 105
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=98.76 E-value=3.3e-08 Score=51.10 Aligned_cols=43 Identities=23% Similarity=0.431 Sum_probs=35.4
Q ss_pred CCEEeecCCCceEEecCCCeEEEEeeEeee-cCCeEEEEeCCCcEEEe
Q psy4606 9 PPDILNEESSSDIMAPEGGTIKLVCKAKGY-PRPHITWKREDGQEIII 55 (69)
Q Consensus 9 ~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~-P~P~~~W~~~~~~~~~~ 55 (69)
+|.+... . ...+.+|..+.|.|.+.|. |.|.++|+| ++..+..
T Consensus 117 ~P~~~~~--~-~~~v~~g~~v~l~C~v~g~~P~p~i~W~k-~g~~l~~ 160 (207)
T 3rbs_A 117 GPHFVEY--L-SWEVTGECNVLLKCKVANIKKETHIVWYK-DEREISV 160 (207)
T ss_dssp SSEEEEE--E-EEEEETTTEEEEEEEEESCCTTCEEEEEE-TTEEECC
T ss_pred CCceEec--C-CcEEcCCCcEEEEEEEeCCCCCCEEEEEE-CCEECCC
Confidence 6776654 3 4678899999999999998 999999999 7877754
No 106
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=98.76 E-value=2.4e-08 Score=51.30 Aligned_cols=45 Identities=27% Similarity=0.583 Sum_probs=36.9
Q ss_pred cCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEec
Q psy4606 8 VPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIIIK 56 (69)
Q Consensus 8 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~~ 56 (69)
.+|.+. . +..+.+..|+.+.|.|.+.|.|.|.+.|++ ++..+...
T Consensus 18 ~~P~~~-~--p~~~~~~~G~~v~l~C~~~g~p~p~i~W~~-~g~~l~~~ 62 (215)
T 3mtr_A 18 YAPKLQ-G--PVAVYTWEGNQVNITCEVFAYPSATISWFR-DGQLLPSS 62 (215)
T ss_dssp EEEEEE-C--CSEEEECTTCCEEEEEEEEEESCCEEEEEE-TTEESSCS
T ss_pred cCCccc-C--CceEEEECCCCEEEEEEEeecCCCEEEEEE-CCeECCCC
Confidence 567774 3 556888999999999999999999999999 77766543
No 107
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=98.76 E-value=3.6e-08 Score=49.62 Aligned_cols=44 Identities=30% Similarity=0.607 Sum_probs=36.9
Q ss_pred cCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEE
Q psy4606 8 VPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEII 54 (69)
Q Consensus 8 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~ 54 (69)
.+|.+... +....+.+|+.+.|.|.+.|.|.|.+.|++ ++..+.
T Consensus 4 ~~P~~~~~--~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~-~~~~~~ 47 (194)
T 2a38_A 4 QAPTFTQP--LQSVVVLEGSTATFEAHISGFPVPEVSWFR-DGQVIS 47 (194)
T ss_dssp EEEEEEEC--CCCEEEETTSCEEEEEEEEEESCCEEEEEE-SSSBCC
T ss_pred CCCeEEcc--CCceEEECCCEEEEEEEEEecCCCEEEEEE-CCEEcc
Confidence 46777765 666788899999999999999999999999 676654
No 108
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=98.76 E-value=2.8e-08 Score=53.26 Aligned_cols=50 Identities=24% Similarity=0.462 Sum_probs=39.2
Q ss_pred eeEEEE---cCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEE
Q psy4606 2 GYLDVV---VPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEII 54 (69)
Q Consensus 2 ~~l~V~---~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~ 54 (69)
+.|.|. .+|.+... +....+.+|+.+.|.|.+.|.|.|.+.|++ ++..+.
T Consensus 195 ~~l~v~~~~~~P~~~~~--~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~-~~~~l~ 247 (304)
T 2yd9_A 195 ANLYVRVQNVAPRFSIL--PMSHEIMPGGNVNITCVAVGSPMPYVKWMQ-GAEDLT 247 (304)
T ss_dssp EEEEEECCCEEEEEEEC--CCCBCCCTTCCEEEEEEEEEESCCEEEEEE-TTEECS
T ss_pred EEEEEEeeccCCcEEec--CCceEEcCCCeEEEEEEEeeeCCCEEEEEE-CCEECC
Confidence 456664 46666655 445667889999999999999999999999 776664
No 109
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=98.74 E-value=7.8e-08 Score=48.89 Aligned_cols=51 Identities=33% Similarity=0.674 Sum_probs=38.2
Q ss_pred eEEEEc-CCEEeecCCCceEEecCCCeEEEEeeE-eeecCCeEEEEeCCCcEEEec
Q psy4606 3 YLDVVV-PPDILNEESSSDIMAPEGGTIKLVCKA-KGYPRPHITWKREDGQEIIIK 56 (69)
Q Consensus 3 ~l~V~~-~p~~~~~~~~~~~~~~~g~~~~l~C~~-~g~P~P~~~W~~~~~~~~~~~ 56 (69)
.|.|.. ++.+... +....+..|+.+.|.|.+ .|.|.|.+.|++ ++..+...
T Consensus 104 ~l~V~~~~~~~~~~--~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~-~~~~l~~~ 156 (212)
T 2v9r_A 104 SLEVAILRDDFRQN--PSDVMVAVGEPAVMECQPPRGHPEPTISWKK-DGSPLDDK 156 (212)
T ss_dssp EEEECEECSSCSBC--CCCEEEETTSCEEEECBCCCEESCCEEEEEE-TTEEECTT
T ss_pred EEEEEeccccceeC--CCceEecCCCcEEEEEecCCCCCCCEEEEEE-CCccCCCC
Confidence 455654 3434333 555678899999999999 899999999999 77776543
No 110
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=98.73 E-value=1.4e-08 Score=54.68 Aligned_cols=49 Identities=20% Similarity=0.379 Sum_probs=36.4
Q ss_pred eEEEEcCCEEeecCCCceEEecCCCeEEEEeeEeeecCC-eEEEEeCCCcEE
Q psy4606 3 YLDVVVPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRP-HITWKREDGQEI 53 (69)
Q Consensus 3 ~l~V~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P-~~~W~~~~~~~~ 53 (69)
.|.|+++|.+...+ ........|..+.|.|.+.|.|.| .+.|++ ++..+
T Consensus 210 ~l~V~~~P~v~~~~-~~~~~~~~g~~v~l~C~~~g~P~p~~v~W~~-~~~~l 259 (313)
T 4fqp_A 210 NLTVYYPPEVSISG-YDNNWYLGQNEATLTCDARSNPEPTGYNWST-TMGPL 259 (313)
T ss_dssp ECCBCEEEEEEEEC-CCSCEETTCCCEEEEEEEEEESCCCEEEEEE-TTBSC
T ss_pred ecccccCCcccccc-ccceeecCCCeEEEEEEecCCCCCcEEEEEE-CCEEC
Confidence 35566788775442 344456678999999999999999 699999 66554
No 111
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=98.72 E-value=1e-08 Score=53.17 Aligned_cols=46 Identities=17% Similarity=0.364 Sum_probs=31.9
Q ss_pred EEcCCEEeecCCCceEEecCCCeEEEEeeEee-ecCC-eEEEEeCCCcEEE
Q psy4606 6 VVVPPDILNEESSSDIMAPEGGTIKLVCKAKG-YPRP-HITWKREDGQEII 54 (69)
Q Consensus 6 V~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~P~P-~~~W~~~~~~~~~ 54 (69)
+..+|.+...+ .. .....|..+.|.|.+.| .|.| .++|++ +|..+.
T Consensus 114 ~~~~P~v~~~~-~~-~~~~~g~~~~L~C~~~g~~P~~~~v~W~k-~g~~~~ 161 (218)
T 2rgs_A 114 LVRAPQVYILP-PP-AEQLSRKDVSLTCLVVGFNPGDISVEWTS-NGHTEE 161 (218)
T ss_dssp CCBCCEEEEEC-CC-GGGTTSSEEEEEEEEEEEBSSCCEEEEEE-TTEEEC
T ss_pred CCCCCEEEEEC-CC-hHHhcCCceEEEEEEEeeeCCCcEEEEEE-CCEecc
Confidence 34677765442 11 11235899999999999 6877 999999 777653
No 112
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=98.71 E-value=2.3e-08 Score=54.94 Aligned_cols=45 Identities=20% Similarity=0.491 Sum_probs=36.0
Q ss_pred cCCEEeecCCCceEEe---cCCCeEEEEeeEeeecCCeEEEEeCCCcEEEe
Q psy4606 8 VPPDILNEESSSDIMA---PEGGTIKLVCKAKGYPRPHITWKREDGQEIII 55 (69)
Q Consensus 8 ~~p~~~~~~~~~~~~~---~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~ 55 (69)
.+|.+... +..... .+|+.+.|.|.+.|.|.|.+.|++ +|..+..
T Consensus 3 ~~P~~~~~--p~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~k-~g~~~~~ 50 (382)
T 1cs6_A 3 YGPVFEEQ--PAHTLFPEGSAEEKVTLTCRARANPPATYRWKM-NGTELKM 50 (382)
T ss_dssp EEEEEEEC--CCCEEEETTCSCCEEEECCEEEEESCCEEEEEE-TTEECCC
T ss_pred CCCEEEEC--CCcEEEecCCCCCcEEEEEEecCCCCCEEEEEE-CCEECCc
Confidence 36777776 444444 689999999999999999999999 7777653
No 113
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=98.71 E-value=2.3e-08 Score=50.84 Aligned_cols=50 Identities=28% Similarity=0.438 Sum_probs=38.8
Q ss_pred eeEEEEcCCEEeecCCCceEEecCCCeEEEEee-EeeecCCeEEEEeCCCc-EEE
Q psy4606 2 GYLDVVVPPDILNEESSSDIMAPEGGTIKLVCK-AKGYPRPHITWKREDGQ-EII 54 (69)
Q Consensus 2 ~~l~V~~~p~~~~~~~~~~~~~~~g~~~~l~C~-~~g~P~P~~~W~~~~~~-~~~ 54 (69)
..|.|..+|.+... .....+..|..+.|.|. +.|.|.|.+.|++ ++. .+.
T Consensus 97 ~~l~V~~~p~~~~~--~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~-~~~~~l~ 148 (212)
T 1f97_A 97 IHLTVLVPPSKPTI--SVPSSVTIGNRAVLTCSEHDGSPPSEYSWFK-DGISMLT 148 (212)
T ss_dssp EEEEEEBCCCCCEE--ECCSEEETTSCEEEEEECSCCBSCCEEEEEE-TTEESBC
T ss_pred EEEEEEcCCCCccc--CCccccCCCCeEEEEEEcccCcCCCEEEEEe-CCccccc
Confidence 35778888876554 33356778999999999 7899999999999 666 554
No 114
>2dm7_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2edl_A 2edw_A 2gqh_A 2edt_A 2edq_A 2edr_A
Probab=98.71 E-value=1.7e-08 Score=47.07 Aligned_cols=44 Identities=20% Similarity=0.353 Sum_probs=34.5
Q ss_pred cCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEec
Q psy4606 8 VPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIIIK 56 (69)
Q Consensus 8 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~~ 56 (69)
.+|.+... +....+.+|+.+.|.|.+.|. |.+.|++ ++..+...
T Consensus 7 ~pp~~~~~--~~~~~v~~G~~v~l~C~~~~~--p~v~W~k-~~~~~~~~ 50 (108)
T 2dm7_A 7 GPARFTQD--LKTKEASEGATATLQCELSKV--APVEWKK-GPETLRDG 50 (108)
T ss_dssp CCCCBCSC--CBCCEEETTSCEEEEEEBSSS--CCCEEES-SSSBCCSS
T ss_pred CCCeeeec--CCcEEEeCCCcEEEEEEeCCC--CeeEEEE-CCEECCCC
Confidence 56777665 667788999999999999775 7899999 66665533
No 115
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=98.70 E-value=4.7e-08 Score=49.40 Aligned_cols=44 Identities=25% Similarity=0.470 Sum_probs=37.5
Q ss_pred CCEEeecCCCceEEecCCCeEEEEeeEe-eecCCeEEEEeCCCcEEEe
Q psy4606 9 PPDILNEESSSDIMAPEGGTIKLVCKAK-GYPRPHITWKREDGQEIII 55 (69)
Q Consensus 9 ~p~~~~~~~~~~~~~~~g~~~~l~C~~~-g~P~P~~~W~~~~~~~~~~ 55 (69)
+|.+... +....+.+|+.+.|.|.+. |.|.|.+.|++ ++..+..
T Consensus 2 ~~~~~~~--p~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~-~g~~l~~ 46 (195)
T 2c5d_C 2 ESPFVGN--PGNITGARGLTGTLRCQLQVQGEPPEVHWLR-DGQILEL 46 (195)
T ss_dssp CCSEEEC--CCCEEECTTCCEEEEEEEEEESSCCCCEEEE-TTEECCS
T ss_pred CCeeccC--hhheEEecCCcEEEecccccCCCCcEEEEEE-CCEEccc
Confidence 6777776 7778899999999999999 99999999999 7776643
No 116
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=98.70 E-value=3.5e-08 Score=49.33 Aligned_cols=44 Identities=23% Similarity=0.567 Sum_probs=33.1
Q ss_pred CCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEe
Q psy4606 9 PPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIII 55 (69)
Q Consensus 9 ~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~ 55 (69)
+|.+... +....+.+|+.+.|.|.+.|.|.|.+.|++ ++..+..
T Consensus 2 ~~~~~~~--p~~~~v~~G~~v~l~C~~~~~p~~~v~W~k-~~~~~~~ 45 (182)
T 1rhf_A 2 GLKLMGA--PVKLTVSQGQPVKLNCSVEGMEEPDIQWVK-DGAVVQN 45 (182)
T ss_dssp -----CC--CEEEEEETTCCEEEEEEEESCSSCCEEEEE-TTEECCS
T ss_pred CCEEEeC--CcceEEeCCCcEEEEEEEeCCCCCeEEEEE-CCeecCC
Confidence 4555555 667788899999999999999999999999 7766543
No 117
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=98.70 E-value=7.2e-08 Score=49.37 Aligned_cols=49 Identities=33% Similarity=0.581 Sum_probs=38.0
Q ss_pred eEEEEc-CCEEeecCCCceEEecCCCeEEEEeeE-eeecCCeEEEEeCCCcEEE
Q psy4606 3 YLDVVV-PPDILNEESSSDIMAPEGGTIKLVCKA-KGYPRPHITWKREDGQEII 54 (69)
Q Consensus 3 ~l~V~~-~p~~~~~~~~~~~~~~~g~~~~l~C~~-~g~P~P~~~W~~~~~~~~~ 54 (69)
.|.|.. +|.+... +....+..|+.+.|.|.+ .|.|.|.+.|++ ++..+.
T Consensus 101 ~l~v~~~~~~~~~~--~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~-~g~~~~ 151 (217)
T 2vr9_A 101 SLQIAVLRDDFRVE--PKDTRVAKGETALLECGPPKGIPEPTLIWIK-DGVPLD 151 (217)
T ss_dssp EEEECEECCSCSBC--CCCEEECTTSCEEECCBCCCEESCCEEEEEE-TTEEEC
T ss_pred eEEEEEeCCCcEEC--CCccEEcCCCeEEEEEECCCCCCCCeEEEEE-CCcCCC
Confidence 455554 5555444 556678899999999999 899999999999 777765
No 118
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=98.69 E-value=9.3e-08 Score=51.10 Aligned_cols=54 Identities=26% Similarity=0.394 Sum_probs=39.2
Q ss_pred eeEEEEcCCEEeecC---CCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEec
Q psy4606 2 GYLDVVVPPDILNEE---SSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIIIK 56 (69)
Q Consensus 2 ~~l~V~~~p~~~~~~---~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~~ 56 (69)
+.|.|..+|.+.... ......+..|..+.|.|.+.|.|.|.+.|++ ++..+...
T Consensus 92 ~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~-~~~~~~~~ 148 (305)
T 2nzi_A 92 ASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQK-GQDLIDNN 148 (305)
T ss_dssp EEEEECEEEEECCCHHHHSSCCEEEETTCCEEEEEEEEEESCCEEEEEE-SSSBCCSS
T ss_pred EEEEEecCCccCCCccccccccEEecCCCEEEEEEEECCCCCCEEEEEE-CCEECCCC
Confidence 456777666653210 0234667889999999999999999999999 67665433
No 119
>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond, glycoprotein, immunoglobulin membrane, transmembrane; HET: NAG; 2.21A {Mus musculus}
Probab=98.69 E-value=5.6e-08 Score=45.01 Aligned_cols=41 Identities=20% Similarity=0.400 Sum_probs=31.6
Q ss_pred EEcCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeC
Q psy4606 6 VVVPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKRE 48 (69)
Q Consensus 6 V~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~ 48 (69)
|..+|.+... +..+.+.+|+.+.|.|.+.|.|.|.+.|++.
T Consensus 3 v~~~p~~~~~--~~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~ 43 (108)
T 3m45_A 3 VKGSQGQFPL--TQNVTVVEGGTAILTCRVDQNDNTSLQWSNP 43 (108)
T ss_dssp -----CCCEE--CCCEEEETTSCEEEEEEESSCSSCCEEEECT
T ss_pred cccCCCcccc--CCeeEEEeCCcEEEEeEEcCCCccEEEEEcC
Confidence 3456666665 6678889999999999999999999999984
No 120
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=98.67 E-value=9.4e-08 Score=47.81 Aligned_cols=43 Identities=19% Similarity=0.390 Sum_probs=32.6
Q ss_pred CCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEE
Q psy4606 9 PPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEII 54 (69)
Q Consensus 9 ~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~ 54 (69)
+|.+... +....+.+|+.+.|.|.+.|.|.|.+.|++ ++..+.
T Consensus 2 ~~~~~~~--~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~-~~~~~~ 44 (189)
T 2v5t_A 2 MLTFREV--VSPQEFKQGEDAEVVCRVSSSPAPAVSWLY-HNEEVT 44 (189)
T ss_dssp CCEEEEC--CSSEEEETTSCEEECCEEECSSCCEEEEEC------C
T ss_pred Cceeecc--CCCEEEeCCCcEEEEEEEcCCCCCEEEEEE-CCccce
Confidence 5677666 566788899999999999999999999999 565543
No 121
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=98.67 E-value=4e-08 Score=50.34 Aligned_cols=50 Identities=20% Similarity=0.353 Sum_probs=34.7
Q ss_pred eEEEE----cCCEEeecCCCceEEecCCCeEEEEeeEee-ecCC-eEEEEeCCCcEEEe
Q psy4606 3 YLDVV----VPPDILNEESSSDIMAPEGGTIKLVCKAKG-YPRP-HITWKREDGQEIII 55 (69)
Q Consensus 3 ~l~V~----~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~P~P-~~~W~~~~~~~~~~ 55 (69)
.|.|. .+|.+... ........++.+.|.|.+.| .|.| .+.|++ +|..+..
T Consensus 111 ~l~V~~~~~~~P~~~~~--~~~~~~~~~~~v~L~C~~~g~~p~~~~v~W~k-~g~~l~~ 166 (218)
T 3s96_B 111 KVTVLGQPKSTPTLTVF--PPSSEELKENKATLVCLISNFSPSGVTVAWKA-NGTPITQ 166 (218)
T ss_dssp EEEEESCCCBCCEEEEE--CCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEE-TTEEC--
T ss_pred EEEEecCCCCCceEEee--CCCcccccCCcEEEEEEECcccCCCeEEEEEE-CCEECcC
Confidence 57777 55666543 22223345789999999999 6888 899999 7877653
No 122
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=98.67 E-value=2e-07 Score=50.02 Aligned_cols=46 Identities=24% Similarity=0.426 Sum_probs=36.5
Q ss_pred cCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEe
Q psy4606 8 VPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIII 55 (69)
Q Consensus 8 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~ 55 (69)
.+|.+... ......+..|+.+.|.|.+.|.|.|.+.|++ +|..+..
T Consensus 207 ~~P~~~~~-~~~~~~~~~g~~v~l~C~~~g~P~p~i~W~~-~g~~i~~ 252 (315)
T 1itb_B 207 TRPVIVSP-ANETMEVDLGSQIQLICNVTGQLSDIAYWKW-NGSVIDE 252 (315)
T ss_dssp CCCEECSC-CSEEEECCSSSCEEEEEEEEECTTSEEEEEE-TTEECCT
T ss_pred CCCEEecC-CCCcEEEeCCCcEEEEEEEecCCCCeeEEEE-CCEECCc
Confidence 56777654 1334578899999999999999999999999 7776654
No 123
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=98.66 E-value=6e-08 Score=52.52 Aligned_cols=49 Identities=20% Similarity=0.482 Sum_probs=35.5
Q ss_pred eeEEEEcCCEE--eecCCCceEEecCCCeEEEEeeEeeecCC--eEEEEeCCCcEEE
Q psy4606 2 GYLDVVVPPDI--LNEESSSDIMAPEGGTIKLVCKAKGYPRP--HITWKREDGQEII 54 (69)
Q Consensus 2 ~~l~V~~~p~~--~~~~~~~~~~~~~g~~~~l~C~~~g~P~P--~~~W~~~~~~~~~ 54 (69)
..|.|..+|.. ... + ...+.+|+.+.|.|.+.|.|.| .+.|++ +++.+.
T Consensus 109 ~~l~V~~~p~~p~i~~--~-~~~~~~g~~~~l~C~~~g~p~~~~~v~W~k-~g~~l~ 161 (327)
T 2wng_A 109 TELSVRAKPSAPVVSG--P-AARATPQHTVSFTCESHGFSPRDITLKWFK-NGNELS 161 (327)
T ss_dssp EEEEEEBCCCCCEEEC--C-SSCBCTTCEEEEEEEEEEEBSSCCEEEEEE-TTEECC
T ss_pred EEEEEEecCCCceeec--c-ccccCCCCEEEEEEEEeCccCCCcEEEEEE-CCEEcc
Confidence 36777765532 222 2 2456789999999999998876 899999 777664
No 124
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=98.66 E-value=2.8e-07 Score=50.84 Aligned_cols=53 Identities=30% Similarity=0.628 Sum_probs=39.0
Q ss_pred eeEEEEcCCE------EeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEecC
Q psy4606 2 GYLDVVVPPD------ILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIIIKE 57 (69)
Q Consensus 2 ~~l~V~~~p~------~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~~~ 57 (69)
..|.|...|. +... +....+.+|+.+.|.|.+.|.|.|.+.|++ ++..+....
T Consensus 208 ~~l~v~~~p~~~~~~~~~~~--~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~-~~~~~~~~~ 266 (403)
T 3laf_A 208 AEVRILSDPGLHRQLYFLQR--PSNVIAIEGKDAVLECCVSGYPPPSFTWLR-GEEVIQLRS 266 (403)
T ss_dssp EEEEEECCCCCCEEEEEEEC--CCCEEEETTSCEEECCEEEEESCCEEEEEE-TTEECCCSS
T ss_pred eeEEEecCCCcccCceEecC--CCceEecCCCcEEEEEEcCCCCCCeEEEEE-CCeeccCCC
Confidence 3566665553 2223 555677899999999999999999999999 776665433
No 125
>3so5_A LIG-3, leucine-rich repeats and immunoglobulin-like DOMA protein 3; structural genomics, joint center for struct genomics, JCSG; HET: MLY MSE; 1.70A {Mus musculus}
Probab=98.66 E-value=1.5e-07 Score=43.60 Aligned_cols=44 Identities=18% Similarity=0.404 Sum_probs=35.3
Q ss_pred EcCCEEeecCCCceEEecCCCeEEEEeeEeee--cCCeEEEEeCCCcEE
Q psy4606 7 VVPPDILNEESSSDIMAPEGGTIKLVCKAKGY--PRPHITWKREDGQEI 53 (69)
Q Consensus 7 ~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~--P~P~~~W~~~~~~~~ 53 (69)
..+|.+... +....+..|+.+.|.|.+.|. |.|.+.|++ ++..+
T Consensus 8 ~~~P~i~~~--p~~~~v~~G~~v~L~C~~~~~~~~~~~i~W~k-~~~~~ 53 (112)
T 3so5_A 8 FPXPQITVQ--PETQSAIXGSDVSFTCSAASSSDSPMTFAWXX-DNEAL 53 (112)
T ss_dssp CCSCEEEEC--CCCEEECTTCCEEEEEEEEESCCCCCEEEEEE-TTEEC
T ss_pred CCCCeEEeC--CCCcEEECCCCEEEEEEEecCCCCCEEEEEcc-CCccc
Confidence 357888776 666788999999999999975 468999999 66554
No 126
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=98.66 E-value=2.2e-08 Score=50.77 Aligned_cols=50 Identities=30% Similarity=0.444 Sum_probs=38.7
Q ss_pred eEEEEcCCEEeecCCCceEEecCCCeEEEEeeE-eeecCCeEEEEeCCCcEEEe
Q psy4606 3 YLDVVVPPDILNEESSSDIMAPEGGTIKLVCKA-KGYPRPHITWKREDGQEIII 55 (69)
Q Consensus 3 ~l~V~~~p~~~~~~~~~~~~~~~g~~~~l~C~~-~g~P~P~~~W~~~~~~~~~~ 55 (69)
.|.|..+|.+... .....+..|..+.|.|.+ .|.|.|.+.|++ ++..+..
T Consensus 101 ~l~V~~~p~~~~~--~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~-~~~~~~~ 151 (209)
T 1nbq_A 101 KLIVLVPPSKPTV--NIPSSATIGNRAVLTCSEQDGSPPSEYTWFK-DGIVMPT 151 (209)
T ss_dssp ECCEEBCCCCCCC--CCBSEEETTSCEEECCCCCSCBSCCEEEEEE-TTCCCCS
T ss_pred EEEEecCCcCCCc--ccccceecCCEEEEEEeCCCCCCCceeEEEE-CCeeCCC
Confidence 4667778876554 334567889999999997 899999999999 6666543
No 127
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=98.66 E-value=9.9e-08 Score=55.66 Aligned_cols=51 Identities=25% Similarity=0.470 Sum_probs=40.2
Q ss_pred eeEEEEcCCE-EeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEe
Q psy4606 2 GYLDVVVPPD-ILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIII 55 (69)
Q Consensus 2 ~~l~V~~~p~-~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~ 55 (69)
+.|.|..+|. +... +....+..|+.+.|.|.+.|.|.|.+.|++ +|..+..
T Consensus 551 ~~l~V~~~p~~~~~~--~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~-~g~~i~~ 602 (642)
T 1e07_A 551 VTLDVLYGPDTPIIS--PPDSSYLSGANLNLSCHSASNPSPQYSWRI-NGIPQQH 602 (642)
T ss_pred EEEEEEeCCCcceec--CCceeEEcCCcEEEEEEeccCCCCeEEEEE-CCEECcc
Confidence 4678876554 4333 556778899999999999999999999999 7776653
No 128
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=98.65 E-value=1.9e-07 Score=46.77 Aligned_cols=44 Identities=43% Similarity=0.825 Sum_probs=35.4
Q ss_pred eeEEEEcCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeC
Q psy4606 2 GYLDVVVPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKRE 48 (69)
Q Consensus 2 ~~l~V~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~ 48 (69)
..|.|..+|.+... . ...+..|..+.|.|.+.|.|.|.+.|++.
T Consensus 88 ~~l~V~~~p~~~~~--~-~~~~~~g~~v~l~C~~~~~p~~~v~W~~~ 131 (192)
T 2va4_A 88 AFLQVFVQPHIIQL--K-NETTYENGQVTLVCDAEGEPIPEITWKRA 131 (192)
T ss_dssp EEEEEEEEEEEEEE--C-CEEECTTSEEEEEEEEEEESCCEEEEEET
T ss_pred EEEEEEccCccccc--C-cceEEeCCeEEEEEEecCCCCCcEEEEeC
Confidence 35778788887654 2 34566799999999999999999999993
No 129
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=98.65 E-value=1.4e-07 Score=50.50 Aligned_cols=47 Identities=19% Similarity=0.523 Sum_probs=36.4
Q ss_pred CCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEecC
Q psy4606 9 PPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIIIKE 57 (69)
Q Consensus 9 ~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~~~ 57 (69)
+|.+... .+....+..|+.+.|.|.+.|.|.|.+.|++ ++..+....
T Consensus 221 ~p~~~~~-~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~-~g~~~~~~~ 267 (317)
T 2y25_A 221 RARVLGG-LPDVVTIQEGKALNLTCNVWGDPPPEVSWLK-NEKALASDD 267 (317)
T ss_dssp SCEEEEB-CCSEEEEETTSBBCEEEEEECSSCCEEEEEE-SSSEECCCS
T ss_pred CCccccc-CCccEEEEcCCEEEEEEEEecCCCCEEEEEE-CCEeCCCCC
Confidence 3444443 2555678899999999999999999999999 777775443
No 130
>2cpc_A KIAA0657 protein; immunoglobulin domain, IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.64 E-value=7e-08 Score=45.27 Aligned_cols=50 Identities=18% Similarity=0.292 Sum_probs=34.9
Q ss_pred EEcCCEEeecCC-CceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEecC
Q psy4606 6 VVVPPDILNEES-SSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIIIKE 57 (69)
Q Consensus 6 V~~~p~~~~~~~-~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~~~ 57 (69)
|..+|.+...+. .....+..|+.+.|.|.+. .|.|.+.|++ +++.+....
T Consensus 7 v~~pp~~~~~p~~~~~~~~~~G~~v~L~C~~~-~p~~~v~W~k-~g~~~~~~~ 57 (113)
T 2cpc_A 7 GTDVSSWIVYPSGKVYVAAVRLERVVLTCELC-RPWAEVRWTK-DGEEVVESP 57 (113)
T ss_dssp CCSCSCSEEESCSCEEEEEETTCCEEEEEEES-CTTCCCEEEE-TTEECCCBT
T ss_pred cccCCcEEEccCCceeEEEEcCCeEEEEEEec-CCCCeEEEEE-CCEECccCC
Confidence 445665444321 1225677899999999995 8999999999 777665433
No 131
>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4
Probab=98.64 E-value=1.3e-07 Score=43.34 Aligned_cols=31 Identities=23% Similarity=0.518 Sum_probs=27.7
Q ss_pred CceEEecCCCeEEEEeeEe-eecCCeEEEEeC
Q psy4606 18 SSDIMAPEGGTIKLVCKAK-GYPRPHITWKRE 48 (69)
Q Consensus 18 ~~~~~~~~g~~~~l~C~~~-g~P~P~~~W~~~ 48 (69)
+....+.+|+.+.|.|.+. |.|.|.+.|+++
T Consensus 17 ~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~ 48 (98)
T 1gl4_B 17 QRSQSVRPGADVTFICTAKSKSPAYTLVWTRL 48 (98)
T ss_dssp CCEEEECTTCCEEEEEEEEESSSCCEEEEEEG
T ss_pred CCCeEEecCCCEEEEEeCCCCCCCcEEEEEeC
Confidence 5667889999999999998 699999999983
No 132
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=98.64 E-value=1e-08 Score=52.12 Aligned_cols=45 Identities=24% Similarity=0.318 Sum_probs=35.4
Q ss_pred eeEEEEcCCEEeecCCCceEEecCCCeEEEEeeE-eeecCCeEEEEeC
Q psy4606 2 GYLDVVVPPDILNEESSSDIMAPEGGTIKLVCKA-KGYPRPHITWKRE 48 (69)
Q Consensus 2 ~~l~V~~~p~~~~~~~~~~~~~~~g~~~~l~C~~-~g~P~P~~~W~~~ 48 (69)
..|.|..+|.+... .....+..|+.+.|.|.+ .|.|.|.+.|++.
T Consensus 114 ~~l~V~~~p~~~~~--~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~ 159 (214)
T 3jz7_A 114 FLLTVLVKPSGTRC--FVDGSEEIGNDFKLKCEPKEGSLPLQFEWQKL 159 (214)
T ss_dssp EEEEEECCCBSCEE--EEESCCBTTCCEEEEEECSBCCSSCEEEEEEC
T ss_pred EEEEEEcCCCCcee--eeecceecCCcEEEEecCCCCCCCCEEEEEEC
Confidence 46788888876543 333346789999999999 8999999999994
No 133
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=98.64 E-value=2.6e-07 Score=49.00 Aligned_cols=50 Identities=26% Similarity=0.385 Sum_probs=39.9
Q ss_pred eeEEEE----cCCEEeecCCCceEEecCCCeEEEEeeEee-ecCCeEEEEeCCCcEEE
Q psy4606 2 GYLDVV----VPPDILNEESSSDIMAPEGGTIKLVCKAKG-YPRPHITWKREDGQEII 54 (69)
Q Consensus 2 ~~l~V~----~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~P~P~~~W~~~~~~~~~ 54 (69)
..|.|. .+|.+... +....+.+|+.+.|.|.+.| .|.|.+.|++ ++..+.
T Consensus 175 ~~l~V~~~~~~~p~i~~~--~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~-~~~~~~ 229 (289)
T 3ejj_X 175 IWLKVNRVHPEPPQIKLE--PSKLVRIRGEAAQIVCSATNAEVGFNVILKR-GDTKLE 229 (289)
T ss_dssp EEEEEESSCCCCCEEEEE--SSSEECCSSSCEEEEEEEEESSSCCEEEEEE-TTEECC
T ss_pred EEEEEEECCCCCCeEEec--CCceEEEeCCcEEEEEEeCCCCCceEEEEEE-CCEEee
Confidence 357777 67887766 55566778999999999999 8999999999 666553
No 134
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=98.64 E-value=3.3e-09 Score=62.54 Aligned_cols=51 Identities=29% Similarity=0.593 Sum_probs=0.0
Q ss_pred eEEE--EcCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEec
Q psy4606 3 YLDV--VVPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIIIK 56 (69)
Q Consensus 3 ~l~V--~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~~ 56 (69)
.|.| ..+|.+... +....+.+|+.+.|.|.+.|.|.|.++|+| ++..+...
T Consensus 658 ~l~v~~~~~P~~~~~--~~~~~v~~g~~~~l~C~~~g~P~p~v~W~k-~g~~l~~~ 710 (772)
T 3v2a_R 658 QLTVLERVAPTITGN--LENQTTSIGESIEVSCTASGNPPPQIMWFK-DNETLVED 710 (772)
T ss_dssp --------------------------------------------------------
T ss_pred eecccccCCCEeecC--CCceEEeCCCCEEEEEEeCccCCCeEEEEE-CCeECcCC
Confidence 3444 467887765 555778899999999999999999999999 77776544
No 135
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=98.64 E-value=1.8e-07 Score=48.15 Aligned_cols=52 Identities=27% Similarity=0.582 Sum_probs=38.1
Q ss_pred eeEEEEcCC---EEeecCCCceEEecCCCeE-EEEeeE-eeecCCeEEEEeCCCcEEEec
Q psy4606 2 GYLDVVVPP---DILNEESSSDIMAPEGGTI-KLVCKA-KGYPRPHITWKREDGQEIIIK 56 (69)
Q Consensus 2 ~~l~V~~~p---~~~~~~~~~~~~~~~g~~~-~l~C~~-~g~P~P~~~W~~~~~~~~~~~ 56 (69)
..|.|..+| .+... +....+.+|..+ .|.|.+ .|.|.|.+.|++ ++..+...
T Consensus 108 ~~l~V~~~p~~~~~~~~--~~~~~~~~g~~~~~l~C~~~~~~p~p~i~W~~-~~~~~~~~ 164 (231)
T 2pet_A 108 ARLNVFAKPEATEVSPN--KGTLSVMEDSAQEIATCNSRNGNPAPKITWYR-NGQRLEVP 164 (231)
T ss_dssp EEEEEEBCCCCCEEEEC--CSSCCTTCCSEEEEEEEEEEEEBSCCEEEEEE-TTEECCCC
T ss_pred EEEEEEecCCCcEEecC--CcceeecCCCceEEEEEEeECcccCCEEEEEE-CCccCccc
Confidence 357777664 44433 444556688887 999999 889999999999 77776543
No 136
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=98.64 E-value=1e-07 Score=50.62 Aligned_cols=49 Identities=18% Similarity=0.396 Sum_probs=36.8
Q ss_pred eEEEEcCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEE
Q psy4606 3 YLDVVVPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEII 54 (69)
Q Consensus 3 ~l~V~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~ 54 (69)
.|.|..+|.+... +....+.+|+.+.|.|.+.|.|.|.+.|++ ++..+.
T Consensus 92 ~l~v~~~~~~~~~--~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~-~~~~~~ 140 (291)
T 2wim_A 92 VLEIYQKLTFREV--VSPQEFKQGEDAEVVCRVSSSPAPAVSWLY-HNEEVT 140 (291)
T ss_dssp EEEEECCCBCCSC--CCSEEEETTSCEEECCCCBCSSCCEEEEEC-C----C
T ss_pred EEEecCCcceEeC--CCChhhcCCCCEEEEEEEccCCCCEEEEEE-CCcccc
Confidence 4666777776655 555678899999999999999999999999 665554
No 137
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=98.63 E-value=3.5e-08 Score=50.47 Aligned_cols=50 Identities=24% Similarity=0.478 Sum_probs=36.4
Q ss_pred eeEEEE----cCCEEeecCCCceEEecCCCeEEEEeeEeee-cCC-eEEEEeCCCcEEE
Q psy4606 2 GYLDVV----VPPDILNEESSSDIMAPEGGTIKLVCKAKGY-PRP-HITWKREDGQEII 54 (69)
Q Consensus 2 ~~l~V~----~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~-P~P-~~~W~~~~~~~~~ 54 (69)
..|.|. .+|.+... +.......|..+.|.|.+.|. |.| .+.|++ +|..+.
T Consensus 103 ~~l~V~~~~~~~P~i~~~--~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k-~g~~l~ 158 (213)
T 3mj8_L 103 TKVTVLGQPNAAPSVTLF--PPSSEELKTNQATLVCMINGFYPADVAVTWEA-DGTPIT 158 (213)
T ss_dssp EEEEEECSCCBCCEEEEE--CCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEE-TTEEEC
T ss_pred eEEEEeCCCCCCCeEEcc--CCCcccccCCcEEEEEEeeceeCCCeEEEEEc-CCcccC
Confidence 467777 67777655 323334479999999999995 543 999999 787764
No 138
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=98.61 E-value=7.3e-08 Score=46.94 Aligned_cols=35 Identities=20% Similarity=0.398 Sum_probs=29.8
Q ss_pred EEeecCCCceEEecCCCeEEEEeeEeee---cCCeEEEEe
Q psy4606 11 DILNEESSSDIMAPEGGTIKLVCKAKGY---PRPHITWKR 47 (69)
Q Consensus 11 ~~~~~~~~~~~~~~~g~~~~l~C~~~g~---P~P~~~W~~ 47 (69)
.|... +..+.+.+|+.+.|.|.+.|. |.|.+.|+|
T Consensus 9 ~F~~~--P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~K 46 (126)
T 2dav_A 9 LFIEK--PQGGTVKVGEDITFIAKVKAEDLLRKPTIKWFK 46 (126)
T ss_dssp SCCSC--CCCCEEETTCCEEEEEEEECCCSSSCCEEEEEE
T ss_pred EEEEc--CCCeEEeCCCCEEEEEEEeccCCCCCCcEEEee
Confidence 35555 677889999999999999885 899999999
No 139
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=98.61 E-value=3.9e-08 Score=53.24 Aligned_cols=45 Identities=16% Similarity=0.451 Sum_probs=33.1
Q ss_pred EEcCCEEeecCCCceEEecCCCeEEEEeeEeeec-CC-eEEEEeCCCcEEEe
Q psy4606 6 VVVPPDILNEESSSDIMAPEGGTIKLVCKAKGYP-RP-HITWKREDGQEIII 55 (69)
Q Consensus 6 V~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P-~P-~~~W~~~~~~~~~~ 55 (69)
+..+|.+... +.. +.+|+.+.|.|.+.|.| .+ .+.|++ +|+.+..
T Consensus 219 v~~~P~i~~~--~~~--~~~G~~v~l~C~~~g~~p~~~~v~W~k-~g~~l~~ 265 (327)
T 2wng_A 219 IRVPPTLEVT--QQP--VRAENQVNVTCQVRKFYPQRLQLTWLE-NGNVSRT 265 (327)
T ss_dssp BCBCCEEEEE--EEC--CSSTTCCEEEEEEEEEBSSCEEEEEEE-TTEEEEE
T ss_pred cCCCCEEEEe--cCC--cCCCCcEEEEEEEccccCCCcEEEEEE-CCeEccC
Confidence 3467776654 222 67899999999999954 44 799999 7877653
No 140
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=98.61 E-value=2.2e-07 Score=47.23 Aligned_cols=48 Identities=19% Similarity=0.368 Sum_probs=34.8
Q ss_pred eEEEEcC---CEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEec
Q psy4606 3 YLDVVVP---PDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIIIK 56 (69)
Q Consensus 3 ~l~V~~~---p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~~ 56 (69)
.|.|..+ |.+... ... +..|+.+.|.|.+.|.| |.+.|++ ++..+...
T Consensus 103 ~l~V~~~~~~p~i~~~--~~~--~~~g~~v~l~C~~~~~p-p~i~W~~-~g~~l~~~ 153 (208)
T 3r4d_A 103 RFHVHQPVTQPFLQVT--NTT--VKELDSVTLTCLSNDIG-ANIQWLF-NSQSLQLT 153 (208)
T ss_dssp EEEEECCCCCCEEEES--CSS--CCTTCCEEEEEECSCTT-CEEEEEE-TTEECCCC
T ss_pred EEEeccCCCCCEEecC--Cce--EeeCCCEEEEEECCCCC-CceEEEE-CCEeCCCC
Confidence 4666654 455443 222 77899999999999976 8999999 77776543
No 141
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=98.60 E-value=9e-08 Score=49.16 Aligned_cols=47 Identities=28% Similarity=0.682 Sum_probs=30.6
Q ss_pred EEEEcC---CEEeecCCCceEEecCCCeEEEEeeE-eeecCCeEEEEeCCCcEE
Q psy4606 4 LDVVVP---PDILNEESSSDIMAPEGGTIKLVCKA-KGYPRPHITWKREDGQEI 53 (69)
Q Consensus 4 l~V~~~---p~~~~~~~~~~~~~~~g~~~~l~C~~-~g~P~P~~~W~~~~~~~~ 53 (69)
|.|..+ |.+... + ...+..|+.+.|.|.+ .|.|.|.+.|++.++..+
T Consensus 103 l~V~~~~~~p~i~~~--~-~~~v~~G~~~~l~C~~~~g~P~~~v~W~~~~~~~~ 153 (222)
T 4i0k_A 103 LQVAAPYSKPSMTLE--P-NKDLRPGNMVTITCSSYQGYPEAEVFWKDGQGVPL 153 (222)
T ss_dssp CCCCBCCCCCEEECC--C------CCSEEEEEEEEEEEBSCCEEEEECTTSCBC
T ss_pred EEEEcCCCCCcEEeC--C-CceecCCceEEEEEecccccCCCeEEEEcCCCccC
Confidence 445443 555443 2 2356689999999999 789999999998555444
No 142
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=98.60 E-value=9.9e-08 Score=48.78 Aligned_cols=49 Identities=29% Similarity=0.507 Sum_probs=35.1
Q ss_pred eEEEE---cCCEEeecCCCceEEecCCCeEEEEeeEee-ecCCeEEEEeCCCcEEE
Q psy4606 3 YLDVV---VPPDILNEESSSDIMAPEGGTIKLVCKAKG-YPRPHITWKREDGQEII 54 (69)
Q Consensus 3 ~l~V~---~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~P~P~~~W~~~~~~~~~ 54 (69)
.|.|. .+|.+... ........|+.+.|.|.+.| .|.|.+.|++ ++..+.
T Consensus 105 ~l~V~~~~~~p~v~~~--~~~~~~~~g~~v~l~C~~~g~~P~~~v~W~k-~g~~~~ 157 (213)
T 3nl4_L 105 EVGVKGDPVAPTVLIF--PPSADLVATGTVTIVCVANKYFPDVTVTWEV-DGTTQT 157 (213)
T ss_dssp EEEEECCCBCCEEEEE--CCCHHHHTTSEEEEEEEEEEEBSCCEEEEEE-TTEECC
T ss_pred EEEEeCCCcCCeEEEe--CCchhhccCCcEeEEEEEecccCCcEEEEEe-CCccCC
Confidence 45663 45655543 22223456899999999999 9999999999 777654
No 143
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=98.59 E-value=2.7e-07 Score=51.80 Aligned_cols=52 Identities=19% Similarity=0.319 Sum_probs=40.7
Q ss_pred eeEEEEcCCEEeecCCCceEEecCCCeEEEEeeEeeecCC---eEEEEeCCCcEEEe
Q psy4606 2 GYLDVVVPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRP---HITWKREDGQEIII 55 (69)
Q Consensus 2 ~~l~V~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P---~~~W~~~~~~~~~~ 55 (69)
+.|.|..+|.+.... +....+.+|+.+.|.|.+.|.|.| .+.|+| ++..+..
T Consensus 78 ~~l~V~~~P~~~~~~-~~~~~v~~G~~v~L~C~~~g~~~~~~~~v~W~k-~g~~l~~ 132 (450)
T 1z7z_I 78 TFLTVYWTPERVELA-PLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLR-GEKELKR 132 (450)
T ss_dssp CEEEEEBCCSEEEEC-CCCSEECTTSEEEEEEEEECCBCGGGEEEEEEE-TTEEEEE
T ss_pred EEEEEEeCCCcceec-CCCceEeeCCeEEEEEEecCCCCCcCcEEEEee-CCEEeec
Confidence 467788888765331 455678899999999999998888 999999 7777653
No 144
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=98.59 E-value=7.7e-08 Score=49.20 Aligned_cols=49 Identities=22% Similarity=0.358 Sum_probs=34.2
Q ss_pred eEEE---EcCCEEeecCCCceEEecCCCeEEEEeeEeeecC--CeEEEEeCCCcEEE
Q psy4606 3 YLDV---VVPPDILNEESSSDIMAPEGGTIKLVCKAKGYPR--PHITWKREDGQEII 54 (69)
Q Consensus 3 ~l~V---~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~--P~~~W~~~~~~~~~ 54 (69)
.|.| ..+|.+... +.......|+.+.|.|.+.|.|. +.+.|++ +|..+.
T Consensus 103 ~l~V~~~~~~p~v~~~--~~~~~~~~~~~v~l~C~~~g~~p~~~~v~W~k-~g~~l~ 156 (213)
T 3r06_A 103 KLEIKRADAKPTVSIF--PPSSEQLGTGSATLVCFVNNFYPKDINVKWKV-DGSEKR 156 (213)
T ss_dssp EEEECCCCBCCEEEEE--CCCHHHHTTTEEEEEEEEEEEBSSCEEEEEEE-TTEEEC
T ss_pred eEEEeccCCCceeeee--CCCceecCCCCcEEEEEEeeecCCceEEEEEE-CCcccC
Confidence 4666 466766554 32333446788999999999654 3899999 787764
No 145
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=98.58 E-value=3.1e-08 Score=50.92 Aligned_cols=46 Identities=15% Similarity=0.389 Sum_probs=31.1
Q ss_pred EEcCCEEeecCCCceEEecCCCeEEEEeeEee-ecCC-eEEEEeCCCcEEE
Q psy4606 6 VVVPPDILNEESSSDIMAPEGGTIKLVCKAKG-YPRP-HITWKREDGQEII 54 (69)
Q Consensus 6 V~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~P~P-~~~W~~~~~~~~~ 54 (69)
+..+|.+...+... ....|+.+.|.|.+.| .|.+ .+.|++ +|+.+.
T Consensus 106 ~~~~P~v~~~~~~~--~~~~g~~~~L~C~~~g~~P~~~~v~W~k-~g~~l~ 153 (207)
T 2vol_A 106 RPKAPQVYTLPPPK--EQMAKDKVSLTCMITDFFPEDITVEWES-NGQPAE 153 (207)
T ss_dssp CCBCCEEEEECCCT--GGGSSSEEEEEEEEEEEBSSCCEEEEEE-TTEECS
T ss_pred CCcCCeEEEeCCCH--HHhcCCceEEEEEEeeEECCCCEEEEEE-CCEecc
Confidence 34677765442121 1235889999999999 5653 899999 777653
No 146
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=98.58 E-value=1.5e-07 Score=48.70 Aligned_cols=49 Identities=14% Similarity=0.158 Sum_probs=36.0
Q ss_pred CCEEeecCCCceEEecCCCeEEEEeeEee-ecCCeEEEEeCCCcEEEecCCcEE
Q psy4606 9 PPDILNEESSSDIMAPEGGTIKLVCKAKG-YPRPHITWKREDGQEIIIKEGNTM 61 (69)
Q Consensus 9 ~p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~P~P~~~W~~~~~~~~~~~~~~~~ 61 (69)
+|.+.. .....+.+|+.+.|.|.+.+ .|.|.++|++ +|+.+..+.++.+
T Consensus 3 ~p~~~~---~~~~~v~eg~~v~l~c~~~~~~P~p~i~W~k-ng~~l~~~~~~~~ 52 (207)
T 3rbs_A 3 DPFTKS---ELAVEILEKGQVRFWMQAEKLSGNAKVNYIF-NEKEIFEGPKYKM 52 (207)
T ss_dssp ---CCE---EEEEEECGGGCEEEEEECSCCCSCCEEEEEE-TTEEECSSSSCEE
T ss_pred CCeeec---CCceEEEeCCeEEEEEEEecCCCCCEEEEEE-CCEECccCCCEEE
Confidence 455554 44677889999999999975 8999999999 8888865544333
No 147
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=98.58 E-value=3.1e-07 Score=53.89 Aligned_cols=48 Identities=19% Similarity=0.424 Sum_probs=39.0
Q ss_pred cCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEecCC
Q psy4606 8 VPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIIIKEG 58 (69)
Q Consensus 8 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~~~~ 58 (69)
..|.+... .....+.+|+.+.+.|.+.|.|.|.++|++ +++.+....+
T Consensus 481 ~~P~~~~~--~~~~~v~~G~~~~~~~~v~g~P~P~v~W~k-~~~el~~s~~ 528 (573)
T 3uto_A 481 AQPRFIVK--PYGTEVGEGQSANFYCRVIASSPPVVTWHK-DDRELKQSVK 528 (573)
T ss_dssp GSCEEEEC--CCCEEECTTSCEEEEEEEECSSCCEEEEEE-TTEECCSSSS
T ss_pred cCCccccC--CCCcEEeCCCcEEEEEEEEccCCCeEEEEE-CCEEcccCCc
Confidence 35777665 667788999999999999999999999999 7777654443
No 148
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=98.57 E-value=6.3e-07 Score=49.31 Aligned_cols=42 Identities=40% Similarity=0.763 Sum_probs=33.4
Q ss_pred CCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCC--CcEEE
Q psy4606 9 PPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKRED--GQEII 54 (69)
Q Consensus 9 ~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~--~~~~~ 54 (69)
+|.+.. +....+.+|+.+.|.|.+.|.|.|.+.|++ + |..+.
T Consensus 1 ~P~i~~---~~~~~~~~G~~v~l~C~~~g~p~p~v~W~~-~~~g~~~~ 44 (389)
T 2jll_A 1 QPHIIQ---LKNETTYENGQVTLVCDAEGEPIPEITWKR-AVDGFTFT 44 (389)
T ss_dssp CCEEEE---CCCEEEETTSEEEEEEEEECSSCCEEEEEE-TTTTEEEC
T ss_pred CCeEEe---cCceEEeCCCeEEEEEEeecccCCeEEEEe-CCCCceec
Confidence 466665 334566789999999999999999999999 5 66654
No 149
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=98.57 E-value=2.1e-07 Score=49.50 Aligned_cols=48 Identities=19% Similarity=0.279 Sum_probs=38.0
Q ss_pred eeEEEE----cCCEEeecCCCceEEecCCCeEEEEeeEeeecCCe-EEEEeCCCcE
Q psy4606 2 GYLDVV----VPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPH-ITWKREDGQE 52 (69)
Q Consensus 2 ~~l~V~----~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~-~~W~~~~~~~ 52 (69)
..|.|. .+|.+... +....+.+|+.+.|.|.+.|.|.|. +.|++ ++..
T Consensus 177 ~~l~V~~~~~~~P~i~~~--~~~~~v~~G~~v~l~C~~~g~p~p~~i~W~~-~~~~ 229 (290)
T 2o26_X 177 FTLKVREAIKAIPVVSVP--ETSHLLKKGDTFTVVCTIKDVSTSVNSMWLK-MNPQ 229 (290)
T ss_dssp EEEEEECCCCSCCEEECS--CSBCCCCTTCCEEEEEEEEESSTTCEEEEEE-ESSS
T ss_pred EEEEEEeCCCCCCccccC--CCcceEecCCcEEEEEEEecCCcceeEEEec-CCCC
Confidence 356666 67888665 4445788999999999999999997 99999 5544
No 150
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=98.56 E-value=4.6e-08 Score=50.91 Aligned_cols=49 Identities=16% Similarity=0.329 Sum_probs=35.4
Q ss_pred eEEEEcC---CEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEE
Q psy4606 3 YLDVVVP---PDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEI 53 (69)
Q Consensus 3 ~l~V~~~---p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~ 53 (69)
.|.|..+ |.+... .+....+.+|+.+.|.|.+.|.|.|.+.|++ ++..+
T Consensus 126 ~l~V~~~~~~~~~~~~-~~~~~~v~~g~~v~L~C~~~g~p~p~v~W~k-~~~~~ 177 (250)
T 2fbo_J 126 VLKVTGHTPSNNVHVS-TAEVVQVDEGNDITMTCPCTDCANANVTWYT-GPTFF 177 (250)
T ss_dssp EEEETTTSCCSCCEEC-CCSEEECCTTCCEEECCCEESCTTCEEEEEE-EEECS
T ss_pred EEEEeccCCCCeEEEe-cCceEEecCCCcEEEEEEecCCCCCeeEEEe-CCCcc
Confidence 4566653 333322 2555777889999999999999999999999 55443
No 151
>1lk2_B Beta-2-microglobulin; class I MHC-peptide complex, high resolution, anisotropic AN refinement, immune system; HET: NAG FUC; 1.35A {Mus musculus} SCOP: b.1.1.2 PDB: 1bqh_B 1cd1_B 1fo0_L* 1fzj_B* 1fzm_B* 1fzo_B* 1g6r_L 1fzk_B* 1g7q_B* 1hoc_B 1inq_B 1juf_B 1k8d_B 1kbg_L* 1kj2_L* 1kj3_L 1kpu_B* 1kpv_B* 1ld9_B 1ldp_L* ...
Probab=98.56 E-value=2.4e-07 Score=43.25 Aligned_cols=43 Identities=23% Similarity=0.284 Sum_probs=29.4
Q ss_pred cCCEEeecCCCceEEecCCCeEEEEeeEee-ecCC-eEEEEeCCCcEEE
Q psy4606 8 VPPDILNEESSSDIMAPEGGTIKLVCKAKG-YPRP-HITWKREDGQEII 54 (69)
Q Consensus 8 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~P~P-~~~W~~~~~~~~~ 54 (69)
++|.+... +.. ....|..+.|.|.+.| +|.. .++|++ +|+.+.
T Consensus 3 ~~P~V~v~--~~~-~~~~~~~~~L~C~~~gfyP~~i~v~W~k-~g~~~~ 47 (99)
T 1lk2_B 3 KTPQIQVY--SRH-PPENGKPNILNCYVTQFHPPHIEIQMLK-NGKKIP 47 (99)
T ss_dssp BCCEEEEE--ESS-CCCTTSCEEEEEEEEEEBSSCCEEEEEE-TTEECT
T ss_pred cCCEEEEE--cCC-cccCCCCEEEEEEEEEEECCCcEEEEEE-CCEECC
Confidence 46766543 111 1235678999999999 5654 899999 787763
No 152
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=98.56 E-value=8.2e-08 Score=51.83 Aligned_cols=50 Identities=22% Similarity=0.296 Sum_probs=38.1
Q ss_pred eeEEEEcCCEEeecCCCceEEecCCCeEEEEeeEeeecCCe-EEEEeCCCcEE
Q psy4606 2 GYLDVVVPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPH-ITWKREDGQEI 53 (69)
Q Consensus 2 ~~l~V~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~-~~W~~~~~~~~ 53 (69)
..|.|..+|.+...+ .....+.+|+.+.|.|.+.|.|.|. +.|++ ++..+
T Consensus 224 ~~l~V~~~P~~~~~~-~~~~~~~~g~~~~l~C~~~g~p~p~~i~W~~-~~~~~ 274 (331)
T 3u83_A 224 LTLNVQYEPEVTIEG-FDGNWYLQRMDVKLTCKADANPPATEYHWTT-LNGSL 274 (331)
T ss_dssp EECCEEEEEEEEEEC-CCSCCBTTCCCEEEEEEEEEESCCCEEEEEE-TTBSC
T ss_pred EEEEEecCCeEEEec-CCCceEeCCCeEEEEEeCcCCCCCCEEEEEE-CCCcc
Confidence 356677788776442 3344577899999999999999998 99999 55544
No 153
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=98.55 E-value=4e-07 Score=54.38 Aligned_cols=50 Identities=22% Similarity=0.393 Sum_probs=40.7
Q ss_pred eEEEEcCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEe
Q psy4606 3 YLDVVVPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIII 55 (69)
Q Consensus 3 ~l~V~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~ 55 (69)
.|.|..+|.+... +....+..|+.+.|.|.+.|.|.|.+.|++ +|..+..
T Consensus 337 ~l~V~~~~~~~~~--~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k-~g~~~~~ 386 (816)
T 3dmk_A 337 VLTVTAPLSAKID--PPTQTVDFGRPAVFTCQYTGNPIKTVSWMK-DGKAIGH 386 (816)
T ss_dssp EEEECEEEEEEEE--SSEEECCTTSCEEEEEEEEEECCCEEEEEE-TTEECSC
T ss_pred EEEEcCCCceeeC--CCceEecCCCCEEEEEEEeccCCCEEEEEE-CCEECCC
Confidence 4667677766655 566778899999999999999999999999 7776643
No 154
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=98.55 E-value=1.1e-07 Score=48.64 Aligned_cols=50 Identities=18% Similarity=0.334 Sum_probs=35.6
Q ss_pred eeEEEE----cCCEEeecCCCceEEecCCCeEEEEeeEeee--cCCeEEEEeCCCcEEE
Q psy4606 2 GYLDVV----VPPDILNEESSSDIMAPEGGTIKLVCKAKGY--PRPHITWKREDGQEII 54 (69)
Q Consensus 2 ~~l~V~----~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~--P~P~~~W~~~~~~~~~ 54 (69)
..|.|. .+|.+... +.......|..+.|.|.+.|. |.|.+.|++ +|..+.
T Consensus 100 ~~l~V~~~~~~~P~v~~~--~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k-~g~~l~ 155 (211)
T 3tv3_L 100 TKLTVLGQPKAAPSVTLF--PPSSEELQANKATLVCLISDFYPGAVTVAWKA-DSSPVK 155 (211)
T ss_dssp EEEEECCSCCBCCEEEEE--CCCHHHHHTTCEEEEEEEEEEBSSCCEEEEEE-TTEEEC
T ss_pred ceEEEeCCCCcCCeeEec--CCchhhhcCCCeEEEEEeeeecCCCeEEEEEE-CCeecC
Confidence 356676 56776654 222233469999999999995 358999999 787764
No 155
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=98.55 E-value=1e-07 Score=48.92 Aligned_cols=47 Identities=30% Similarity=0.543 Sum_probs=36.3
Q ss_pred cCCEEeecC--CCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEe
Q psy4606 8 VPPDILNEE--SSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIII 55 (69)
Q Consensus 8 ~~p~~~~~~--~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~ 55 (69)
.+|.+...+ ......+.+|+.+.|.|.+.|.|.|.+.|++ ++..+..
T Consensus 14 ~~P~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~-~~~~~~~ 62 (231)
T 3ojm_B 14 RAPYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLK-NGKEFKQ 62 (231)
T ss_dssp EEEEESCGGGGCCSCEEEETTSCEEEECCEEEESCCEEEEEE-TTEECCG
T ss_pred cCCccccccccCceeEEEccCCCEEEEEecccCCCCeEEEEE-CCccccc
Confidence 466665431 0256778899999999999999999999999 7776643
No 156
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.55 E-value=5.8e-08 Score=44.79 Aligned_cols=36 Identities=22% Similarity=0.525 Sum_probs=29.3
Q ss_pred CceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEe
Q psy4606 18 SSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIII 55 (69)
Q Consensus 18 ~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~ 55 (69)
+....+..|..+.|.|.+.|.| |.+.|++ ++..+..
T Consensus 10 p~~~~v~~G~~v~L~C~~~g~p-p~i~W~k-~g~~~~~ 45 (99)
T 2cr3_A 10 VESFLVHPGDLLQLRCRLRDDV-QSINWLR-DGVQLAE 45 (99)
T ss_dssp EEECCBCTTSCEEEECCCCSSC-CEEEEEE-SSSBCCC
T ss_pred CcCeEEeCCCcEEEEEEecCCC-CeEEEEE-CCEECCC
Confidence 4455678899999999999987 8999999 6766543
No 157
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=98.54 E-value=2.4e-07 Score=47.77 Aligned_cols=44 Identities=25% Similarity=0.382 Sum_probs=35.6
Q ss_pred cCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEE
Q psy4606 8 VPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEII 54 (69)
Q Consensus 8 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~ 54 (69)
..+++... +....+.+|+.+.|.|.+.|.|.|.+.|++ ++..+.
T Consensus 17 ~~~~i~~~--p~~~~v~~G~~v~L~C~~~~~p~~~v~W~~-~~~~~~ 60 (218)
T 3k0w_A 17 RGSKITVN--PESKAVLAGQFVKLCCRATGHPFVQYQWFK-MNKEIP 60 (218)
T ss_dssp --CCEEEC--CCCEEEETTSBEEEECEETTTTSSEEEEEE-TTEECT
T ss_pred CCCEEEEC--CCCeEEeCCCcEEEEeeecCCCCCEEEEEE-CCEECC
Confidence 34566666 677888999999999999999999999999 666654
No 158
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=98.53 E-value=2.4e-07 Score=46.68 Aligned_cols=43 Identities=33% Similarity=0.596 Sum_probs=33.8
Q ss_pred CCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEE
Q psy4606 9 PPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEII 54 (69)
Q Consensus 9 ~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~ 54 (69)
+|.+... .....+..|..+.|.|.+.|.|.|.+.|++ ++..+.
T Consensus 113 ~p~~~~~--~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~-~~~~~~ 155 (201)
T 3s97_C 113 PADIVVQ--FKDVYALMGQNVTLECFALGNPVPDIRWRK-VLEPMP 155 (201)
T ss_dssp EEEEEEE--CCCEEEETTCCEEEEEEEEEESCCEEEEEE-TTBCCC
T ss_pred CCceEec--CCceEEecCCcEEEEEEccCCCCCceEEEe-CCCcCC
Confidence 4555554 336678899999999999999999999999 665543
No 159
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=98.53 E-value=6.8e-07 Score=44.84 Aligned_cols=43 Identities=16% Similarity=0.297 Sum_probs=34.0
Q ss_pred CEEeecCCCceEEecCCCeEEEEeeEeeec-CCeEEEEeCCCcEEE
Q psy4606 10 PDILNEESSSDIMAPEGGTIKLVCKAKGYP-RPHITWKREDGQEII 54 (69)
Q Consensus 10 p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P-~P~~~W~~~~~~~~~ 54 (69)
+.+... +....+.+|+.+.|.|.+.|.| .+.+.|++.++..+.
T Consensus 3 ~~v~~~--p~~~~v~~G~~v~l~C~~~~~~~~~~v~W~~~~g~~~~ 46 (191)
T 1epf_A 3 LQVDIV--PSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLS 46 (191)
T ss_dssp CCEEEE--SSSEEEETTCCEEEEEEECCCSCCCEEEEECTTSCEEC
T ss_pred eEEEec--CCCcEEcCCCCEEEEEECCCCCCCceEEEEeCCCcccc
Confidence 445454 5667788999999999999976 899999985666665
No 160
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=98.52 E-value=9.5e-08 Score=49.07 Aligned_cols=49 Identities=27% Similarity=0.466 Sum_probs=32.8
Q ss_pred eEEEE---cCCEEeecCCCceEEecCCCeEEEEeeEee-ecCC-eEEEEeCCCcEEE
Q psy4606 3 YLDVV---VPPDILNEESSSDIMAPEGGTIKLVCKAKG-YPRP-HITWKREDGQEII 54 (69)
Q Consensus 3 ~l~V~---~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~P~P-~~~W~~~~~~~~~ 54 (69)
.|.|. .+|.+...+ +. .....|+.+.|.|.+.| .|.| .+.|++ +|+.+.
T Consensus 105 ~l~V~~~~~~P~v~~~~-~~-~~~~~g~~v~L~C~~~g~~P~~~~v~W~k-~g~~~~ 158 (216)
T 2xzc_L 105 KLEIKRTVAAPSVFIFP-PS-DEQLKSGTASVVCLLNNFYPREAKVQWKV-DNALQS 158 (216)
T ss_dssp EEEECCCCBCCEEEEEC-CC-HHHHHTTEEEEEEEEEEEBSSCCEEEEEE-TTEECC
T ss_pred EEEEcCCCCCCceEEeC-CC-hhhccCCcEEEEEEEEeEcCCceEEEEEE-CCeecC
Confidence 46665 456665431 21 11235889999999999 6665 899999 777654
No 161
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=98.52 E-value=1e-07 Score=52.26 Aligned_cols=46 Identities=20% Similarity=0.305 Sum_probs=33.7
Q ss_pred eEEEEcCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEe
Q psy4606 3 YLDVVVPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIII 55 (69)
Q Consensus 3 ~l~V~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~ 55 (69)
.|.|..+|.+ .. ....+|..+.|.|.+.|.|.|.++|++ +|..+..
T Consensus 244 ~l~V~~~P~i-~~-----~~~~~g~~v~l~C~~~g~P~p~i~W~~-~g~~l~~ 289 (347)
T 2ifg_A 244 QVNVSFPASV-QL-----HTAVEMHHWCIPFSVDGQPAPSLRWLF-NGSVLNE 289 (347)
T ss_dssp CCCCBEEEEE-EE-----CCCEESSSEEEEEEEEEESCCEEEEEE-TTEECCC
T ss_pred EEEEcCCCee-ee-----ccCccCceEEEEEEeeecCCCcEEEEe-CCEECCC
Confidence 3455566664 11 112468899999999999999999999 7777653
No 162
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=98.52 E-value=3e-07 Score=49.23 Aligned_cols=45 Identities=22% Similarity=0.422 Sum_probs=36.5
Q ss_pred cCCEEeecCCCceEEecCCCeEEEEeeEeee-cCCeEEEEeCCCcEEEec
Q psy4606 8 VPPDILNEESSSDIMAPEGGTIKLVCKAKGY-PRPHITWKREDGQEIIIK 56 (69)
Q Consensus 8 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~-P~P~~~W~~~~~~~~~~~ 56 (69)
.+|.+.. +....+.+|+.+.|.|.+.|. |.|.+.|++ ++..+...
T Consensus 6 ~~P~~~~---~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~-~~~~~~~~ 51 (317)
T 2y25_A 6 TGPHFVE---YLSWEVTGECNVLLKCKVANIKKETHIVWYK-DEREISVD 51 (317)
T ss_dssp SCCEEEE---EEEEEEETTTEEEEEEEEESCCTTCEEEEEE-TTEEECCS
T ss_pred CCCcEee---eeeEEECCCCeEEEEEEEcCCCCCCEEEEEE-CCeEcCCC
Confidence 4778775 345788999999999999996 889999999 77776543
No 163
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=98.50 E-value=1.6e-06 Score=47.10 Aligned_cols=47 Identities=17% Similarity=0.301 Sum_probs=37.0
Q ss_pred eeEEEEcCC----EEeecCCCceEEecCCCeEEEEeeEeeec---CC-eEEEEeCCCcE
Q psy4606 2 GYLDVVVPP----DILNEESSSDIMAPEGGTIKLVCKAKGYP---RP-HITWKREDGQE 52 (69)
Q Consensus 2 ~~l~V~~~p----~~~~~~~~~~~~~~~g~~~~l~C~~~g~P---~P-~~~W~~~~~~~ 52 (69)
..|.|..+| .+. . +....+..|+.+.|.|.+.|.| .| .+.|++ ++..
T Consensus 218 ~~l~V~~~~~~~~~~~-~--~~~~~v~~G~~~~l~C~~~g~p~~~~~i~v~W~~-~g~~ 272 (329)
T 3oq3_B 218 KILTVIPSQDHRFKLI-L--DPKINVTIGEPANITCTAVSTSLLVDDVLIDWEN-PSGW 272 (329)
T ss_dssp EEEEEECCCCCCEEEE-C--CSEEEECTTSCEEEEEEEEETTCCTTCCEEEEEC-TTSC
T ss_pred EEEEEECCCCCCCcee-c--CCeeEEecCCCEEEEEEEEECCCCCCCcEEEEEE-CCee
Confidence 357777766 444 3 5567888999999999999988 78 899999 6655
No 164
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=98.50 E-value=3.7e-07 Score=46.89 Aligned_cols=50 Identities=14% Similarity=0.090 Sum_probs=35.0
Q ss_pred eeEEEEcCCEEeecCCCceEEecCCCeEEEEeeEeee-cC--CeEEEEeCCCcEEE
Q psy4606 2 GYLDVVVPPDILNEESSSDIMAPEGGTIKLVCKAKGY-PR--PHITWKREDGQEII 54 (69)
Q Consensus 2 ~~l~V~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~-P~--P~~~W~~~~~~~~~ 54 (69)
..|.|+.+|...... .. ..+.+|+.+.|.|.+.|. |. +.++|++ ++..+.
T Consensus 84 ~~l~V~~~p~~~~~~-~~-~~~~~G~~~~L~C~~~~~~p~~~~~i~W~k-~~~~l~ 136 (202)
T 1vca_A 84 IQVEIYSFPKDPEIH-LS-GPLEAGKPITVKCSVADVYPFDRLEIDLLK-GDHLMK 136 (202)
T ss_dssp EEEEEEBCCSCCEEE-ES-SCEETTSCEEEEEEEEEEBSGGGEEEEEEE-TTEEEE
T ss_pred EEEEEEeCCCCCEeC-Cc-eEEcCCCCEEEEEEECCcCCCCCeEEEEEe-CCeECc
Confidence 467888777533221 22 456789999999999985 44 4789999 777664
No 165
>1k5n_B Beta-2-microglobulin, light chain; MHC(major histocompatibility complex), HLA(human leukocyte A immune system; 1.09A {Homo sapiens} SCOP: b.1.1.2 PDB: 1a9b_B 1b0g_B 1b0r_B 1bd2_B 1cg9_B 1a9e_B 1duy_B 1eey_B 1eez_B 1efx_B 1gzp_B* 1gzq_B* 1hhg_B 1hhh_B 1hhi_B 1hhj_B 1hhk_B 1i1f_B 1i1y_B 1duz_B* ...
Probab=98.50 E-value=2.3e-07 Score=43.38 Aligned_cols=42 Identities=24% Similarity=0.368 Sum_probs=28.9
Q ss_pred cCCEEeecCCCceEEecCCCeEEEEeeEee-ecCC-eEEEEeCCCcEE
Q psy4606 8 VPPDILNEESSSDIMAPEGGTIKLVCKAKG-YPRP-HITWKREDGQEI 53 (69)
Q Consensus 8 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~P~P-~~~W~~~~~~~~ 53 (69)
.+|.+...+ . . ....|..+.|.|.+.| +|.. .++|.+ +|+.+
T Consensus 4 ~~P~V~v~~-~-~-~~~~~~~~~L~C~~~gFyP~~i~v~W~k-~g~~~ 47 (100)
T 1k5n_B 4 RTPKIQVYS-R-H-PAENGKSNFLNCYVSGFHPSDIEVDLLK-NGERI 47 (100)
T ss_dssp BCCEEEEEE-S-S-CCCTTSCEEEEEEEEEEBSSCCEEEEEE-TTEEC
T ss_pred CCCEEEEEe-C-C-cccCCCcEEEEEEEEeeECCceEEEEEE-CCEEC
Confidence 466665421 1 1 1235678999999999 6765 899999 78776
No 166
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=98.50 E-value=1.4e-07 Score=48.19 Aligned_cols=50 Identities=24% Similarity=0.431 Sum_probs=34.9
Q ss_pred eEEEEc---CCEEeecCCCceEEecCCCeEEEEeeEee-ecCC-eEEEEeCCCcEEEe
Q psy4606 3 YLDVVV---PPDILNEESSSDIMAPEGGTIKLVCKAKG-YPRP-HITWKREDGQEIII 55 (69)
Q Consensus 3 ~l~V~~---~p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~P~P-~~~W~~~~~~~~~~ 55 (69)
.|.|.. +|.+... ........|..+.|.|.+.| .|.| .+.|++ +|..+..
T Consensus 103 ~l~V~~~~~~p~v~~~--~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k-~g~~~~~ 157 (213)
T 3d9a_L 103 KLEIKRADAAPTVSIF--PPSSEQLTSGGASVVCFLNNFYPKDINVKWKI-DGSERQN 157 (213)
T ss_dssp EEEECCCCBCCEEEEE--CCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEE-TTEEECT
T ss_pred EEEEecCCCCceeEeE--CCChhhcCCCcEEEEEEEeeecCCceEEEEEc-CCCcCcc
Confidence 566664 6766553 21222346889999999998 7776 899999 7877653
No 167
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=98.49 E-value=1e-06 Score=45.33 Aligned_cols=49 Identities=18% Similarity=0.194 Sum_probs=38.2
Q ss_pred eeEEEEcCCEEeecCCCceEEecCCCeEEEEeeEee-ecCCeEEEEeCCCcEEE
Q psy4606 2 GYLDVVVPPDILNEESSSDIMAPEGGTIKLVCKAKG-YPRPHITWKREDGQEII 54 (69)
Q Consensus 2 ~~l~V~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~P~P~~~W~~~~~~~~~ 54 (69)
..|.|..+|.+... +. ..+.+|+.+.|.|.+.+ .|.|.+.|++ ++..+.
T Consensus 82 ~~l~V~~~p~~~~~--~~-~~v~~G~~v~L~C~~~~~~p~~~v~W~k-~g~~~~ 131 (204)
T 3sgj_C 82 VQLEVHIGWLLLQA--PR-WVFKEEDPIHLRCHSWKNTALHKVTYLQ-NGKGRK 131 (204)
T ss_dssp EEEEEECSSEEEEC--SC-SEEETTCCEEEEEEEGGGCCCEEEEEEE-TTEEEE
T ss_pred EEEEEecCceEecC--Cc-eeEeCCCcEEEEEEecCCCCCceEEEEE-CCcEee
Confidence 46788888877664 33 56778999999999976 5779999999 777653
No 168
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=98.49 E-value=1.3e-06 Score=43.22 Aligned_cols=49 Identities=24% Similarity=0.297 Sum_probs=37.4
Q ss_pred eeEEEEcCCEEeecCCCceEEecCCCeEEEEeeEe-eecCCeEEEEeCCCcEEE
Q psy4606 2 GYLDVVVPPDILNEESSSDIMAPEGGTIKLVCKAK-GYPRPHITWKREDGQEII 54 (69)
Q Consensus 2 ~~l~V~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~-g~P~P~~~W~~~~~~~~~ 54 (69)
..|.|..+|.+... + ...+.+|..+.|.|.+. |.|.|.+.|++ ++..+.
T Consensus 79 ~~l~v~~~~~~~~~--~-~~~~~~g~~~~l~C~~~~~~p~~~~~W~~-~g~~~~ 128 (170)
T 3ry4_A 79 VHLTVLFEWLVLQT--P-HLEFQEGETIMLRCHSWKDKPLVKVTFFQ-NGKSQK 128 (170)
T ss_dssp EEEEEECCSEEEEC--S-CSEECTTCCEEEEEEEGGGCCEEEEEEEE-TTEEEE
T ss_pred EEEEEECCceEecC--C-CceeecCCeEEEEEECCCCCCCceEEEEE-CCeEcc
Confidence 46777777766553 2 34677899999999994 57889999999 777665
No 169
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=98.48 E-value=4.1e-07 Score=45.77 Aligned_cols=44 Identities=16% Similarity=0.369 Sum_probs=32.9
Q ss_pred EcCCEEeecCCCceEEecC-CCeEEEEeeEeeecC--CeEEEEeCCCcEEE
Q psy4606 7 VVPPDILNEESSSDIMAPE-GGTIKLVCKAKGYPR--PHITWKREDGQEII 54 (69)
Q Consensus 7 ~~~p~~~~~~~~~~~~~~~-g~~~~l~C~~~g~P~--P~~~W~~~~~~~~~ 54 (69)
|.+|.+... ....+.+ |+.+.|.|.+.|.|. |.+.|++ ++..+.
T Consensus 1 Q~~P~i~~~---~~~~v~~~G~~v~l~C~~~~~~~~~~~v~W~~-~~~~~~ 47 (190)
T 2wv3_A 1 QNEPRIVTS---EEVIIRDSLLPVTLQCNLTSSSHTLMYSYWTK-NGVELT 47 (190)
T ss_dssp --CCEEEEC---CCEECCCSSSCEEEEEEEEECSSCEEEEEEEE-TTEECT
T ss_pred CCCCccccc---ceEEEccCCceEEEEEEeccCCCCceEEEEEE-CCEECc
Confidence 457887653 3455556 999999999999887 8899999 676654
No 170
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=98.48 E-value=1.9e-07 Score=53.08 Aligned_cols=35 Identities=31% Similarity=0.758 Sum_probs=30.5
Q ss_pred CceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEE
Q psy4606 18 SSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEI 53 (69)
Q Consensus 18 ~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~ 53 (69)
+....+.+|+.+.+.|.+.|.|.|.+.|++ ++..+
T Consensus 392 ~~~~~v~~G~~v~l~C~~~g~P~p~i~W~~-~~~~~ 426 (477)
T 2id5_A 392 AQQVFVDEGHTVQFVCRADGDPPPAILWLS-PRKHL 426 (477)
T ss_dssp CEEEEEETTCCEEECCCEEEESCCEEEEEC-TTSCB
T ss_pred cccEEEeCCCeEEEEEeccccCCCEEEEEE-CCccc
Confidence 567788999999999999999999999999 55443
No 171
>1bii_B Beta-2 microglobulin, MHC class I H-2DD; complex (MHC I/peptide), major histocompatibility complex class I DD, transmembrane, glycoprotein; 2.40A {Mus musculus} SCOP: b.1.1.2
Probab=98.48 E-value=5.5e-07 Score=43.37 Aligned_cols=42 Identities=21% Similarity=0.291 Sum_probs=28.9
Q ss_pred cCCEEeecCCCceEEecCCCeEEEEeeEee-ecCC-eEEEEeCCCcEE
Q psy4606 8 VPPDILNEESSSDIMAPEGGTIKLVCKAKG-YPRP-HITWKREDGQEI 53 (69)
Q Consensus 8 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~P~P-~~~W~~~~~~~~ 53 (69)
.+|.+...+ .. ....|..++|.|.+.| +|.. .++|.+ ||+.+
T Consensus 23 ~~P~V~v~~-~~--~~~~~~~~tL~C~a~gFyP~~I~v~W~k-nG~~i 66 (119)
T 1bii_B 23 KTPQIQVYS-RH--PPENGKPNILNCYVTQFHPPHIEIQMLK-NGKKI 66 (119)
T ss_dssp BCCEEEEEE-SS--CCCSSSCEEEEEEEEEEBSSCCEEEEEE-TTEEC
T ss_pred cCCEEEEEc-CC--cccCCCCEEEEEEEEeecCCCeEEEEEE-CCEEC
Confidence 567765421 11 1235678999999999 5654 899999 78776
No 172
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=98.48 E-value=1.7e-07 Score=47.93 Aligned_cols=49 Identities=27% Similarity=0.453 Sum_probs=33.6
Q ss_pred eEEEEc---CCEEeecCCCceEEecCCCeEEEEeeEee-ecCC-eEEEEeCCCcEEE
Q psy4606 3 YLDVVV---PPDILNEESSSDIMAPEGGTIKLVCKAKG-YPRP-HITWKREDGQEII 54 (69)
Q Consensus 3 ~l~V~~---~p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~P~P-~~~W~~~~~~~~~ 54 (69)
.|.|.. +|.+...+ + ......|+.+.|.|.+.| .|.| .+.|++ +|+.+.
T Consensus 102 ~l~V~~~~~~P~v~~~~-~-~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k-~g~~~~ 155 (210)
T 1lk3_L 102 KLELKRADAAPTVSIFP-P-STEQLATGGASVVCLMNNFYPRDISVKWKI-DGTERR 155 (210)
T ss_dssp EEEECCCCBCCEEEEEC-C-CHHHHTTTEEEEEEEEEEEBSSCCEEEEEE-TTEECC
T ss_pred EEEEcCCCcCCeEEEEC-C-chhhccCCcEEEEEEEEeEeCCceEEEEEe-CCccCC
Confidence 566664 56665532 2 122347899999999998 5665 899999 777654
No 173
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=98.47 E-value=3.9e-07 Score=46.28 Aligned_cols=29 Identities=31% Similarity=0.851 Sum_probs=25.4
Q ss_pred EecCCCeEEEEeeEeeecCCeEEEEeCCCc
Q psy4606 22 MAPEGGTIKLVCKAKGYPRPHITWKREDGQ 51 (69)
Q Consensus 22 ~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~ 51 (69)
...+|+.+.|.|.+.|.|.|.+.|++ ++.
T Consensus 114 ~~~~g~~v~l~C~~~g~P~p~v~W~~-~~~ 142 (202)
T 3bp6_B 114 EVPGTGEVQLTCQARGYPLAEVSWQN-VSV 142 (202)
T ss_dssp ECTTTCCEEEEEEEEEBSCCEEEETT-CCS
T ss_pred ecCCCCeEEEEEEccccCCceEEEEe-CCC
Confidence 45689999999999999999999998 444
No 174
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=98.47 E-value=3.3e-07 Score=46.54 Aligned_cols=47 Identities=15% Similarity=0.171 Sum_probs=26.2
Q ss_pred eeEEEEc---CCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEE
Q psy4606 2 GYLDVVV---PPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEI 53 (69)
Q Consensus 2 ~~l~V~~---~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~ 53 (69)
..|.|.. +|.+... + ...+.+|+.+.|.|.+.|.| |.+.|+| ++..+
T Consensus 90 ~~l~V~~~~~~p~i~~~--~-~~~v~~G~~v~L~C~~~~~p-~~~~W~k-~g~~~ 139 (196)
T 2d3v_A 90 LELVVTGFYNKPTLSAL--P-SPVVTSGENVTLQCGSRLRF-DRFILTE-EGDHK 139 (196)
T ss_dssp EEEEEECSSCCCEEEC--------------CEEEEEESSCC-SEEEEEE-C---C
T ss_pred EEEEecCCCCCCeEEcc--C-CccccCCCcEEEEEEcCCCC-CEEEEEc-cCCcc
Confidence 3567765 4666543 3 24677899999999999999 9999999 66554
No 175
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=98.47 E-value=1.8e-07 Score=47.99 Aligned_cols=45 Identities=24% Similarity=0.480 Sum_probs=29.3
Q ss_pred EcCCEEeecCCCceEEecCCCeEEEEeeEee-ecCC-eEEEEeCCCcEEE
Q psy4606 7 VVPPDILNEESSSDIMAPEGGTIKLVCKAKG-YPRP-HITWKREDGQEII 54 (69)
Q Consensus 7 ~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~P~P-~~~W~~~~~~~~~ 54 (69)
..+|.+...+... ....++.+.|.|.+.| .|.+ .++|++ +|..+.
T Consensus 107 ~~~P~v~~~~~~~--~~~~~~~~~L~C~~~g~~P~~~~v~W~k-~g~~~~ 153 (207)
T 1l6x_A 107 PREPQVYTLPPSR--DELTKNQVSLTCLVKGFYPSDIAVEWES-NGQPEN 153 (207)
T ss_dssp CBCCEEEEECCCG--GGGGSSEEEEEEEEEEEBSSCCEEEEEE-TTEEEC
T ss_pred CcCCEEEEECCCh--HHhcCCcEEEEEEEeCeECCCeEEEEEE-CCeecc
Confidence 3567655432121 1124667999999999 5654 999999 787664
No 176
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=98.47 E-value=5e-07 Score=52.75 Aligned_cols=51 Identities=27% Similarity=0.350 Sum_probs=38.7
Q ss_pred eeEEEEcCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEE
Q psy4606 2 GYLDVVVPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEII 54 (69)
Q Consensus 2 ~~l~V~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~ 54 (69)
..|.|..+|..... .+....+..|..+.|.|.+.|.|.|.+.|++ +|..+.
T Consensus 373 ~~l~V~~~p~~~~~-~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~-~g~~~~ 423 (642)
T 1e07_A 373 VILNVLYGPDDPTI-SPSYTYYRPGVNLSLSCHAASNPPAQYSWLI-DGNIQQ 423 (642)
T ss_pred EEEEEEcCCCCCee-cCCceEecCCCcEEEEEEcCccCCCeEEEEE-CCEEcC
Confidence 35777766643222 1445677899999999999999999999999 776654
No 177
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=98.46 E-value=2.7e-07 Score=47.43 Aligned_cols=47 Identities=26% Similarity=0.538 Sum_probs=33.0
Q ss_pred eEEEEcC----CEEeecCCCceEEecCCCeEEEEeeEee-ecCC-eEEEEeCCCcE
Q psy4606 3 YLDVVVP----PDILNEESSSDIMAPEGGTIKLVCKAKG-YPRP-HITWKREDGQE 52 (69)
Q Consensus 3 ~l~V~~~----p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~P~P-~~~W~~~~~~~ 52 (69)
.|.|... |.+... .....+..|+.+.|.|.+.| .|.| .+.|++ ++..
T Consensus 114 ~l~V~~~~~~~P~i~~~--~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~-~g~~ 166 (219)
T 1c1e_H 114 SLTVSSAKTTPPSVYPL--APGSAAQTNSMVTLGCLVKGYFPEPVTVTWNS-GSLS 166 (219)
T ss_dssp EEEECCCCCBCCEEEEE--CCCSSSCCSSEEEEEEEEEEEBSSCCEEEEGG-GTBC
T ss_pred EEEEecCCCCCCeEEEe--cCccccccCCeEEEEEEcccccCCCeEEEEEe-CCcc
Confidence 4666642 555443 21123467999999999999 9999 999999 5654
No 178
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=98.46 E-value=3.8e-07 Score=46.63 Aligned_cols=49 Identities=22% Similarity=0.430 Sum_probs=32.7
Q ss_pred eEEEE----cCCEEeecCCCceEEecCCCeEEEEeeEeee-cCC-eEEEEeCCCcEEE
Q psy4606 3 YLDVV----VPPDILNEESSSDIMAPEGGTIKLVCKAKGY-PRP-HITWKREDGQEII 54 (69)
Q Consensus 3 ~l~V~----~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~-P~P-~~~W~~~~~~~~~ 54 (69)
.|.|. .+|.+... ........|..+.|.|.+.|. |.| .+.|++ +|+.+.
T Consensus 105 ~l~V~~~~~~~P~v~~~--~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k-~g~~l~ 159 (212)
T 1q0x_L 105 KLTVLGQPKSSPTVTLF--PPSSEELSTAKATLVCTITDFYPGVVTVDWKV-DGTPVT 159 (212)
T ss_dssp EEEECCSCCBCCEEEEE--CCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEE-TTEEEC
T ss_pred EEEEecCCCCCCeeEEe--CCCHHHccCCcEEEEEEEEEEeCCCeEEEEEE-CCEeCC
Confidence 45553 46666543 211223468899999999995 444 899999 787764
No 179
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=98.46 E-value=6.4e-07 Score=46.81 Aligned_cols=45 Identities=16% Similarity=0.221 Sum_probs=36.1
Q ss_pred CCEEeecCCCceEEecCCCeEEEEeeEeeecCC-eEEEEeCCCcEEEec
Q psy4606 9 PPDILNEESSSDIMAPEGGTIKLVCKAKGYPRP-HITWKREDGQEIIIK 56 (69)
Q Consensus 9 ~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P-~~~W~~~~~~~~~~~ 56 (69)
.|.+... +....+.+|+.+.|.|.+.|.|.| .+.|++ ++..+...
T Consensus 1 kP~i~~~--p~~~~v~~G~~v~l~C~~~~~~~~~~~~W~~-~g~~~~~~ 46 (262)
T 3rjd_A 1 KAVITLQ--PPWVSVFQEETVTLHCEVLHLPGSSSTQWFL-NGTATQTS 46 (262)
T ss_dssp CCEEEES--SCCSEEETTCCEEEEEECSSCCCTTCEEEEE-TTEECSCC
T ss_pred CCeEecC--CCcEEeeCCCeEEEEEECCCCCCCceEEEEE-CCEEeecc
Confidence 3666665 556678899999999999999988 999999 77776443
No 180
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=98.46 E-value=4.1e-07 Score=51.99 Aligned_cols=45 Identities=20% Similarity=0.383 Sum_probs=30.6
Q ss_pred EcCCEEeecCCCceEEecCCCeEEEEeeEeeecCC--eEEEEeCCCcEEE
Q psy4606 7 VVPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRP--HITWKREDGQEII 54 (69)
Q Consensus 7 ~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P--~~~W~~~~~~~~~ 54 (69)
..+|.+...+ +....+ .++.+.|.|.+.|.|.| .+.|++ +|+.+.
T Consensus 423 ~~~P~v~~~~-~~~~~~-~~~~~~l~C~~~g~~p~~~~v~W~k-~g~~~~ 469 (523)
T 2rcj_C 423 PREPQVYTLP-PSREEM-TKNQVSLTCLVKGFYPSDIAVEWES-NGQPEN 469 (523)
T ss_pred CCCCEEEEeC-CChHHc-cCCceEEEEEEEeeECCCCEEEEEE-CCEECC
Confidence 4677765442 222222 34459999999997766 899999 787764
No 181
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=98.46 E-value=3.2e-07 Score=48.74 Aligned_cols=42 Identities=14% Similarity=0.309 Sum_probs=32.4
Q ss_pred EEEEc--CCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEe
Q psy4606 4 LDVVV--PPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKR 47 (69)
Q Consensus 4 l~V~~--~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~ 47 (69)
|.|.. +|.+... +....+.+|+.+.|.|.+.|.|.|.+.|++
T Consensus 174 l~v~~~~~p~i~~~--~~~~~v~~G~~v~L~C~~~g~p~p~v~W~~ 217 (289)
T 3mjg_X 174 VYRLQVSSINVSVN--AVQTVVRQGENITLMCIVIGNEVVNFEWTY 217 (289)
T ss_dssp EEECCCCCCCCEEE--ESCSEEETTSCEEEEEEEESCSSBEEEEEC
T ss_pred EEecCCCCCCcEEe--CCcceeEcCCCEEEEEEECCCCCcceEEEc
Confidence 44443 5555544 334567899999999999999999999997
No 182
>2eo1_A OBSCN protein, cDNA FLJ14124 FIS, clone mamma1002498; beta-sandwich, IG-fold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.45 E-value=2.8e-07 Score=42.47 Aligned_cols=36 Identities=22% Similarity=0.594 Sum_probs=30.2
Q ss_pred ceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEec
Q psy4606 19 SDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIIIK 56 (69)
Q Consensus 19 ~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~~ 56 (69)
..+.+.+|+.+.|.|.+. .|.|.+.|+| ++..+...
T Consensus 19 ~~~~v~~G~~v~L~C~~~-~p~~~v~W~k-~g~~~~~~ 54 (102)
T 2eo1_A 19 REVQAEAGASATLSCEVA-QAQTEVTWYK-DGKKLSSS 54 (102)
T ss_dssp EEEEEETTCCEEECCBCS-CSSSCCEEEE-TTEECCCC
T ss_pred ccEEEeCCCcEEEEEEec-CCCCceEEEE-CCEECCCC
Confidence 456788999999999998 8999999999 77766543
No 183
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=98.45 E-value=4.3e-08 Score=52.58 Aligned_cols=49 Identities=20% Similarity=0.351 Sum_probs=35.9
Q ss_pred eEEEEcCCEEeecCCCceEEecCCCeEEEEeeEeeecCC-eEEEEeCCCcEE
Q psy4606 3 YLDVVVPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRP-HITWKREDGQEI 53 (69)
Q Consensus 3 ~l~V~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P-~~~W~~~~~~~~ 53 (69)
.|.|+.+|.+...+ ........|..+.|.|.+.|.|.| .+.|+| ++..+
T Consensus 205 ~l~V~~~P~~~~~~-~~~~~~~~g~~v~l~C~~~g~P~p~~v~W~k-~~~~~ 254 (308)
T 4fom_A 205 ILDIQYAPEVSVTG-YDGNWFVGRKGVNLKCNADANPPPFKSVWSR-LDGQW 254 (308)
T ss_dssp ECCCCEEEEECCBC-CCSCEETTCCSCEEECCEEEESCEEEEECCB-SSSCC
T ss_pred EEEEecCCeeEEcc-cceeeeeccccEEEEEEEecCCCCcEEEEEE-CCeEC
Confidence 34566778776542 334556778999999999999999 699999 45443
No 184
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=98.44 E-value=1.4e-07 Score=48.86 Aligned_cols=49 Identities=20% Similarity=0.422 Sum_probs=33.0
Q ss_pred eEEEE---cCCEEeecCCCceEEecCCCeEEEEeeEee-ec-CCeEEEEeCCCcEEE
Q psy4606 3 YLDVV---VPPDILNEESSSDIMAPEGGTIKLVCKAKG-YP-RPHITWKREDGQEII 54 (69)
Q Consensus 3 ~l~V~---~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~P-~P~~~W~~~~~~~~~ 54 (69)
.|.|. .+|.+... ........|+.+.|.|.+.| .| .|.++|++ +|..+.
T Consensus 126 ~l~V~~~~~~p~v~~~--~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~k-~g~~~~ 179 (237)
T 3sob_L 126 KVEIKRTVAAPSVFIF--PPSDEQLKSGTASVVCLLNNFYPREAKVQWKV-DNALQS 179 (237)
T ss_dssp EEEEECCCBCCEEEEE--CCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEE-TTEECC
T ss_pred EEEEecCCCCCceEEe--CCChhhccCCceEEEEEEcccCCCceEEEEEE-CCCCCC
Confidence 45553 45655543 22222335788999999999 56 68999999 776654
No 185
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=98.44 E-value=5e-07 Score=51.65 Aligned_cols=49 Identities=18% Similarity=0.329 Sum_probs=35.7
Q ss_pred eEEE----EcCCEEeecCCCceEEecCCCeEEEEeeEeeecCC--eEEEEeCCCcEEE
Q psy4606 3 YLDV----VVPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRP--HITWKREDGQEII 54 (69)
Q Consensus 3 ~l~V----~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P--~~~W~~~~~~~~~ 54 (69)
.|.| ..+|.+... +......+|+.+.|.|.+.|.|.| .++|++ +|+.+.
T Consensus 104 ~l~V~~~~~~~P~~~~~--~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k-~g~~l~ 158 (523)
T 2rcj_C 104 KVTVLGQPKANPTVTLF--PPSSEELQANKATLVCLISDFYPGAVTVAWKA-DGSPVK 158 (523)
T ss_pred EEEeccCCCcCCeEEec--CCcccccCCCceEEEEEeccccCCceEEEEec-CCCCCC
Confidence 5677 356766554 444455678999999999997764 999999 776653
No 186
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=98.42 E-value=1.1e-06 Score=43.82 Aligned_cols=46 Identities=15% Similarity=0.210 Sum_probs=36.0
Q ss_pred cCCEEeecCCCceEEecCCCeEEEEeeEeeecCCe-EEEEeCCCcEEEec
Q psy4606 8 VPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPH-ITWKREDGQEIIIK 56 (69)
Q Consensus 8 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~-~~W~~~~~~~~~~~ 56 (69)
.+|.+... +....+.+|+.+.|.|.+.|.|.|. +.|++ ++..+...
T Consensus 6 ~~p~i~~~--p~~~~v~~G~~v~L~C~~~~~p~~~~~~W~~-~~~~~~~~ 52 (175)
T 1fnl_A 6 PKAVVFLE--PQWYSVLEKDSVTLKCQGAYSPEDNSTQWFH-NESLISSQ 52 (175)
T ss_dssp CCCEEEEE--SCCSEEETTCCEEEEEECCCBTTBCCCEEEE-TTEEEESS
T ss_pred CCCEEEEc--CCceeeeCCCcEEEEeeCCCCCCCcceEEEE-CCEEccCC
Confidence 35666665 5556788999999999999999887 78999 77776543
No 187
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=98.42 E-value=5.6e-07 Score=46.62 Aligned_cols=46 Identities=28% Similarity=0.601 Sum_probs=35.2
Q ss_pred cCCEEeecCC--CceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEE
Q psy4606 8 VPPDILNEES--SSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEII 54 (69)
Q Consensus 8 ~~p~~~~~~~--~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~ 54 (69)
.+|.+..... +....+.+|+.+.|.|.+.|.|.|.+.|++ ++..+.
T Consensus 10 ~~P~~~~p~~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~-~~~~~~ 57 (241)
T 3grw_A 10 GAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLK-NGREFR 57 (241)
T ss_dssp -CCEESSGGGGSCCEEEEETTSEEEEECCEECSSCCEEEEEE-TTEECC
T ss_pred CCceeEcCCCCCCcceEEcCCCeEEEEEEecCCCCceeEEEE-CCcccC
Confidence 5676654311 335778899999999999999999999999 776654
No 188
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=98.41 E-value=2.2e-06 Score=42.79 Aligned_cols=49 Identities=18% Similarity=0.230 Sum_probs=36.1
Q ss_pred eeEEEEcCCEEeecCCCceEEecCCCeEEEEeeEeeecC-CeEEEEeCCCcEEE
Q psy4606 2 GYLDVVVPPDILNEESSSDIMAPEGGTIKLVCKAKGYPR-PHITWKREDGQEII 54 (69)
Q Consensus 2 ~~l~V~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~-P~~~W~~~~~~~~~ 54 (69)
..|.|..++.+... + ...+.+|..+.|.|.+.|.|. |.+.|++ ++..+.
T Consensus 82 ~~l~V~~~~~~~~~--~-~~~~~~g~~~~l~C~~~~~~~~~~~~W~k-~g~~~~ 131 (175)
T 1fnl_A 82 VQLEVHIGWLLLQA--P-RWVFKEEDPIHLRCHSWKNTALHKVTYLQ-NGKDRK 131 (175)
T ss_dssp EEEEEECSSEEEEC--S-CSEEETTCCEEEEEEECTTCCCEEEEEEE-TTEEEE
T ss_pred EEEEEeCCCceeeC--C-CceecCCCCEEEEEEcCCCCCceEEEEEE-CCeEcc
Confidence 45777766655543 2 345778999999999998655 5999999 777664
No 189
>3gbl_A BETA2-microglobulin; immune response, immunoglobulin domain, MHC I, secreted, immune system; 2.10A {Ctenopharyngodon idella} SCOP: b.1.1.0
Probab=98.41 E-value=2.2e-07 Score=43.25 Aligned_cols=28 Identities=29% Similarity=0.516 Sum_probs=23.6
Q ss_pred CCCeEEEEeeEee-ecCC-eEEEEeCCCcEE
Q psy4606 25 EGGTIKLVCKAKG-YPRP-HITWKREDGQEI 53 (69)
Q Consensus 25 ~g~~~~l~C~~~g-~P~P-~~~W~~~~~~~~ 53 (69)
.|..+.|.|.+.| +|.+ .++|.+ +|+.+
T Consensus 17 ~~~~~~L~C~~~gFyP~~i~v~W~~-~g~~~ 46 (97)
T 3gbl_A 17 YGKENTLICYVSGFHPPDISIELLK-NGEVI 46 (97)
T ss_dssp TTCCEEEEEEEECCBSSCEEEEEEE-TTEEC
T ss_pred CCCcEEEEEEEcceeCCccEEEEEE-CCccC
Confidence 4778999999999 6776 799999 77765
No 190
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=98.40 E-value=4.9e-07 Score=48.12 Aligned_cols=50 Identities=16% Similarity=0.265 Sum_probs=38.5
Q ss_pred eeEEEEcCCEEeecCCCceEEecCCCeEEEEeeEeeecC-CeEEEEeCCCcEEE
Q psy4606 2 GYLDVVVPPDILNEESSSDIMAPEGGTIKLVCKAKGYPR-PHITWKREDGQEII 54 (69)
Q Consensus 2 ~~l~V~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~-P~~~W~~~~~~~~~ 54 (69)
..|.|..+|.+... .....+.+|+.+.|.|.+.| |. |.+.|++.+|..+.
T Consensus 84 ~~l~V~~~~~~~~~--~~~~~~~~g~~v~l~C~~~~-p~~~~v~W~~~~g~~l~ 134 (290)
T 2o26_X 84 IYVFVRDPAKLFLV--GLPLFGKEDSDALVRCPLTD-PQVSQYSLIECDGKSLP 134 (290)
T ss_dssp EEEEEECSSCCBCC--CCCEEEETTSCEEECCCBSC-CSCEEEEEEETTSCCCC
T ss_pred EEEEEeCCCccccc--ccceEEecCCeEEEeCcCCC-CCCceEEEEeCCCcCCC
Confidence 46788887776543 55677889999999999997 87 99999543776664
No 191
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=98.40 E-value=2.1e-07 Score=48.62 Aligned_cols=50 Identities=30% Similarity=0.567 Sum_probs=34.5
Q ss_pred eEEEEc------CCEEeecCCCceEEecCCCeEEEEeeEeee-cCC-eEEEEeCCCcEEE
Q psy4606 3 YLDVVV------PPDILNEESSSDIMAPEGGTIKLVCKAKGY-PRP-HITWKREDGQEII 54 (69)
Q Consensus 3 ~l~V~~------~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~-P~P-~~~W~~~~~~~~~ 54 (69)
.|.|.. +|.+.... +....+..|..+.|.|.+.|. |.| .+.|++ +|..+.
T Consensus 108 ~l~V~~~~~~~~~P~v~~~~-~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~~-~g~~~~ 165 (238)
T 1bec_A 108 RLTVLEDLRQVTPPKVSLFE-PSKAEIANKQKATLVCLARGFFPDHVELSWWV-NGKEVH 165 (238)
T ss_dssp EEEEESCGGGCBCCEEEEEC-CCSTTCSSSCSCSEEEEEEEEBSCCEEEEEEE-TTEEEC
T ss_pred EEEEeccCCCCCCCceEEEC-CChHHcccCCceEEEEEEeeEeCCCcEEEEEE-CCEECC
Confidence 467764 56554331 222334578999999999995 766 899999 777664
No 192
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=98.40 E-value=8.8e-07 Score=46.40 Aligned_cols=48 Identities=23% Similarity=0.243 Sum_probs=35.2
Q ss_pred eeEEEEcCCEEeecCCCceEEecCCCeEEEEeeEee-ecCC----eEEEEeCCCcEEE
Q psy4606 2 GYLDVVVPPDILNEESSSDIMAPEGGTIKLVCKAKG-YPRP----HITWKREDGQEII 54 (69)
Q Consensus 2 ~~l~V~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~P~P----~~~W~~~~~~~~~ 54 (69)
+.|.|+.+|...... +. ....|+.. |.|.+.| .|.+ ++.|+| +++.+.
T Consensus 89 ~~ltV~~~P~~~~i~-~~--~~~~g~~~-l~C~a~g~~P~~~~~lti~Wlk-~~~~L~ 141 (210)
T 1gsm_A 89 VQLLVYAFPNQLTVS-PA--ALVPGDPE-VACTAHKVTPVDPNALSFSLLV-GGQELE 141 (210)
T ss_dssp EEEEEEBCCSEEEEE-SS--SBCTTCCE-EEEEEEEEBCCCTTTEEEEEEE-TTEECT
T ss_pred EEEEEEecCCCcEEc-cc--eEEeCCce-EEEEeCCCCCCCCCCcEEEEEE-CCEEcc
Confidence 578889999765531 22 45567778 9999999 5754 899999 777763
No 193
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.40 E-value=1.2e-07 Score=45.66 Aligned_cols=35 Identities=23% Similarity=0.487 Sum_probs=29.8
Q ss_pred EEeecCCCceEEecCCCeEEEEeeEeee---cCCeEEEEe
Q psy4606 11 DILNEESSSDIMAPEGGTIKLVCKAKGY---PRPHITWKR 47 (69)
Q Consensus 11 ~~~~~~~~~~~~~~~g~~~~l~C~~~g~---P~P~~~W~~ 47 (69)
.+... +..+.+.+|..+.|.|.+.|. |.|.+.|+|
T Consensus 14 ~f~~~--P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~K 51 (118)
T 2edn_A 14 VFLKK--PDSVSVETGKDAVVVAKVNGKELPDKPTIKWFK 51 (118)
T ss_dssp SCSBC--CCCCEEETTSCEECCEEEETTTSSSCCCCEEEE
T ss_pred eEEEC--CCCeEEeCCCCEEEEEEEeccCCCCCCcEEEee
Confidence 44555 677889999999999999885 899999999
No 194
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=98.38 E-value=1.1e-06 Score=45.84 Aligned_cols=46 Identities=28% Similarity=0.503 Sum_probs=30.8
Q ss_pred eeEEEEcCCEEeecCCCceEEecCCCeEEEEeeEee-ecCC-eEEEEeCCCc
Q psy4606 2 GYLDVVVPPDILNEESSSDIMAPEGGTIKLVCKAKG-YPRP-HITWKREDGQ 51 (69)
Q Consensus 2 ~~l~V~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~P~P-~~~W~~~~~~ 51 (69)
..|.|..+|.+... +. .....|+.+.|.|.+.| .|.| .+.|++ +++
T Consensus 112 ~~L~V~~~P~v~~~--~~-~~~~~~~~~~L~C~~~g~~P~pi~v~W~k-~g~ 159 (248)
T 3pv7_A 112 VQLEVVASPASRLL--LD-QVGMKENEDKYMCESSGFYPEAINITWEK-QTQ 159 (248)
T ss_dssp EEEEEEBCCEEEEE--CC---------CEEEEEEEEEBSSCCEEEEEE-ECS
T ss_pred EEEEEecCCceEEe--cC-CccccCCCcEEEEEEccEECCCeEEEEEE-CCc
Confidence 46788888987765 22 23445778889999999 8999 999999 554
No 195
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=98.38 E-value=2.7e-07 Score=48.63 Aligned_cols=45 Identities=22% Similarity=0.442 Sum_probs=30.0
Q ss_pred EcCCEEeecCCCceEEecCCCeEEEEeeEee-ecCC-eEEEEeCCCcEEE
Q psy4606 7 VVPPDILNEESSSDIMAPEGGTIKLVCKAKG-YPRP-HITWKREDGQEII 54 (69)
Q Consensus 7 ~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~P~P-~~~W~~~~~~~~~ 54 (69)
..+|.+...+... ....|..+.|.|.+.| .|.+ .+.|++ +|+.+.
T Consensus 121 ~~~P~v~v~~~~~--~~~~g~~~~L~C~~~g~~P~~~~v~W~k-~g~~l~ 167 (239)
T 1i1c_A 121 PRGPQVYTMAPPK--EEMTQSQVSITCMVKGFYPPDIYTEWKM-NGQPQE 167 (239)
T ss_dssp CBCCEEEEECCCG--GGGGSSEEEEEEEEEEEBSSCCEEEEEE-TTEECS
T ss_pred CcCCEEEEECCCh--HHhcCCcEEEEEEEeeeECCCeEEEEEE-CCEECC
Confidence 3567665442121 1234788999999999 5653 899999 777653
No 196
>4hwu_A Fibroblast growth factor receptor 2; FGFR2, KGFR, CD332, IG-C2 type 1 domain, IG superfamily, IMM system, structural genomics, PSI-biology; 2.90A {Mus musculus}
Probab=98.38 E-value=1.1e-06 Score=40.00 Aligned_cols=36 Identities=22% Similarity=0.501 Sum_probs=29.7
Q ss_pred CceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEec
Q psy4606 18 SSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIIIK 56 (69)
Q Consensus 18 ~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~~ 56 (69)
+....+.+|+.+.|.|.+.| .|.+.|++ ++..+...
T Consensus 8 p~~~~v~~G~~~~l~C~~~~--~p~v~W~k-~g~~~~~~ 43 (95)
T 4hwu_A 8 PEAYVVAPGESLELQCMLKD--AAVISWTK-DGVHLGPN 43 (95)
T ss_dssp CEEEEECTTSCEEEECCCCT--TCEEEEEE-TTEEECCC
T ss_pred CCcEEECCCCEEEEEEEeCC--CCEEEEEE-CCEECCCC
Confidence 55677889999999999987 58999999 78776543
No 197
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=98.37 E-value=1.2e-06 Score=46.32 Aligned_cols=44 Identities=9% Similarity=0.202 Sum_probs=35.8
Q ss_pred eEEEEcCCEEeecCCCceEEecCCCeEEEEeeEeeecCC-----eEEEEeC
Q psy4606 3 YLDVVVPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRP-----HITWKRE 48 (69)
Q Consensus 3 ~l~V~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P-----~~~W~~~ 48 (69)
.|.|..+|.+... +....+.+|..++|.|.+.|.|.| .+.|++.
T Consensus 115 ~L~V~~~~~v~~~--p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~ 163 (256)
T 1nqb_A 115 TVTVSSDIELTQT--PLSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYLQ 163 (256)
T ss_dssp EEEECCCCCEEEE--CSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEE
T ss_pred eeeecccccEEec--CcEEEEecCCcEEEEeEecCcccccccceEEEEEEE
Confidence 5677777776655 666778999999999999998775 9999983
No 198
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=98.37 E-value=1.5e-06 Score=44.68 Aligned_cols=46 Identities=15% Similarity=0.208 Sum_probs=35.7
Q ss_pred cCCEEeecCCCceEEecCCCeEEEEeeEeeecCCe-EEEEeCCCcEEEec
Q psy4606 8 VPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPH-ITWKREDGQEIIIK 56 (69)
Q Consensus 8 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~-~~W~~~~~~~~~~~ 56 (69)
..|.+... +....+.+|+.+.|.|.+.|.|.|. +.|++ ++..+...
T Consensus 6 p~p~i~~~--p~~~~v~~G~~v~L~C~~~~~p~~~~v~W~k-~g~~l~~~ 52 (204)
T 3sgj_C 6 PKAVVFLE--PQWYRVLEKDSVTLKCQGAYSPEDQSTQWFH-NESLISSQ 52 (204)
T ss_dssp CBCEEEEE--SCCSEEETTCCEEEEEECCSSSSCCCEEEEE-TTEEESCC
T ss_pred CCCeEEEc--CCCeEEECCCCEEEEEcCCCCCCCcEEEEEE-CCEEcccC
Confidence 34566555 5446788999999999999999886 99999 77776543
No 199
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=98.37 E-value=2.6e-06 Score=43.08 Aligned_cols=36 Identities=25% Similarity=0.553 Sum_probs=29.5
Q ss_pred CceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEE
Q psy4606 18 SSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEII 54 (69)
Q Consensus 18 ~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~ 54 (69)
........+..+.+.|.+.|.|.|.++|++ ++..+.
T Consensus 125 ~~~~~~~~~~~~~~~c~~~g~p~p~i~W~~-~~~~~~ 160 (218)
T 4frw_A 125 GPALEEGQGLTLAASCTAEGSPAPSVTWDT-EVKGTT 160 (218)
T ss_dssp CSCEETTCCSEEEEEEEEEEBSCCEEEEEE-SSCCEE
T ss_pred eeeeeeeeccccceeeeccCCcCceEEEEE-CCcccc
Confidence 445667789999999999999999999999 555443
No 200
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=98.37 E-value=7.9e-07 Score=49.00 Aligned_cols=45 Identities=29% Similarity=0.547 Sum_probs=34.7
Q ss_pred eEEEEcCCEEeecCCCceEEecCCCeEEEEeeE-eeecCCeEEEEeC
Q psy4606 3 YLDVVVPPDILNEESSSDIMAPEGGTIKLVCKA-KGYPRPHITWKRE 48 (69)
Q Consensus 3 ~l~V~~~p~~~~~~~~~~~~~~~g~~~~l~C~~-~g~P~P~~~W~~~ 48 (69)
.|.|..+|.+.... .....+.+|+.+.|.|.+ .|.|.|.+.|+++
T Consensus 109 ~l~V~~~p~~~~~~-~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~ 154 (404)
T 3p3y_A 109 RLQVSKSPLWPKEN-LDPVVVQEGAPLTLQCNPPPGLPSPVIFWMSS 154 (404)
T ss_dssp EEEECCCCCCCCCC-CCCEEEETTSCEEECCCCCCCSSCCEEEEECT
T ss_pred EEEEeccCccccCC-CCCeEEccCCcEEEEeCCCCCCCCCeEEEeCC
Confidence 46676676554331 344678899999999999 7899999999994
No 201
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=98.37 E-value=2e-06 Score=45.93 Aligned_cols=44 Identities=23% Similarity=0.438 Sum_probs=34.5
Q ss_pred CCEEeecCCCceEEecCCCeEEEEeeEeeecCC-eEEEEeCCCcEEEec
Q psy4606 9 PPDILNEESSSDIMAPEGGTIKLVCKAKGYPRP-HITWKREDGQEIIIK 56 (69)
Q Consensus 9 ~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P-~~~W~~~~~~~~~~~ 56 (69)
+|.+... ....+.+|+.+.|.|.+.|.|.| .+.|++ ++..+...
T Consensus 222 ~p~~~~~---~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~-~g~~~~~~ 266 (312)
T 2y23_A 222 GPHFVEY---LSWEVTGECNVLLKCKVANIKKETHIVWYK-DEREISVD 266 (312)
T ss_dssp SSEEEEE---EEEEEETTTEEEEEEEEESCCSSCEEEEEE-TTEEEEEE
T ss_pred CCceeec---ceEEEeCCCEEEEEEEEcCCCCCCEEEEee-CCEECCCC
Confidence 3555532 23677899999999999999998 999999 78877643
No 202
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=98.37 E-value=3.5e-07 Score=50.97 Aligned_cols=45 Identities=16% Similarity=0.371 Sum_probs=31.3
Q ss_pred EEcCCEEeecCCCceEEecCCCeEEEEeeEee-ec-CCeEEEEeCCCcEE
Q psy4606 6 VVVPPDILNEESSSDIMAPEGGTIKLVCKAKG-YP-RPHITWKREDGQEI 53 (69)
Q Consensus 6 V~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~P-~P~~~W~~~~~~~~ 53 (69)
+..+|.+... +.......|..+.|.|.+.| +| .+.++|++ +|+.+
T Consensus 271 ~~~~P~v~v~--~~~~~~~~g~~~~L~C~~~g~~P~~i~v~W~k-~g~~~ 317 (376)
T 2aty_A 271 RPKAPQLYTI--PPPKEQMAKDKVSLTCMITDFFPEDITVEWQW-NGQPA 317 (376)
T ss_pred CCcCCeEEee--CCCHHHhcCCceEEEEEEEEeECCCcEEEEEE-CCEEC
Confidence 3467776654 22222345889999999999 44 46899999 77665
No 203
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=98.37 E-value=3.4e-07 Score=45.73 Aligned_cols=46 Identities=13% Similarity=0.205 Sum_probs=32.7
Q ss_pred EcCCEEeecCCCceEEecCCCeEEEEeeEeeecCC-eEEEEeCCCcEEEe
Q psy4606 7 VVPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRP-HITWKREDGQEIII 55 (69)
Q Consensus 7 ~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P-~~~W~~~~~~~~~~ 55 (69)
..+|.+... +....+.+|+.+.|.|.+.|.|.| .+.|++ ++..+..
T Consensus 2 ~~~P~i~~~--p~~~~v~~G~~v~L~C~~~~~~~~~~i~W~~-~~~~~~~ 48 (176)
T 1f2q_A 2 PQKPKVSLN--PPWNRIFKGENVTLTCNGNNFFEVSSTKWFH-NGSLSEE 48 (176)
T ss_dssp --CCCCEEE--SSCSEEETTCCEEEECCTTCC----CCEEEE-TTEECSC
T ss_pred CCCCEEEcC--CCCcceecCCcEEEEEeCCCCCCcceEEEEE-CCeECCC
Confidence 456777665 555678899999999999998886 699999 7766543
No 204
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=98.37 E-value=3.2e-07 Score=46.92 Aligned_cols=50 Identities=24% Similarity=0.414 Sum_probs=34.5
Q ss_pred eEEEE----cCCEEeecCCCceEEecCCCeEEEEeeEeee-cC-CeEEEEeCCCcEEEe
Q psy4606 3 YLDVV----VPPDILNEESSSDIMAPEGGTIKLVCKAKGY-PR-PHITWKREDGQEIII 55 (69)
Q Consensus 3 ~l~V~----~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~-P~-P~~~W~~~~~~~~~~ 55 (69)
.|.|. .+|.+... ........|..+.|.|.+.|. |. |.+.|++ +|+.+..
T Consensus 103 ~l~V~~~~~~~p~v~~~--~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k-~g~~~~~ 158 (212)
T 1nfd_E 103 QLTVLRGPKSSPKVTVF--PPSPEELRTNKATLVCLVNDFYPGSATVTWKA-NGATIND 158 (212)
T ss_dssp EEEEECCCCBCCEEECC--CCCHHHHHTTEECCCEEEEEEBSSCCEEEEEE-TTEEECS
T ss_pred EEEEccCCCCCCEEEee--CCchHhccCCceEEEEEEEeeECCccEEEEEE-CCeEcCC
Confidence 45663 45666543 222233568899999999996 65 8999999 7877653
No 205
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=98.36 E-value=1.7e-06 Score=43.14 Aligned_cols=49 Identities=22% Similarity=0.342 Sum_probs=36.3
Q ss_pred eeEEEEcCCEEeecCCCceEEecCCCeEEEEeeEe-eecCCeEEEEeCCCcEEE
Q psy4606 2 GYLDVVVPPDILNEESSSDIMAPEGGTIKLVCKAK-GYPRPHITWKREDGQEII 54 (69)
Q Consensus 2 ~~l~V~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~-g~P~P~~~W~~~~~~~~~ 54 (69)
..|.|..++.+... + ...+.+|+.+.|.|.+. |.|.|.+.|++ +|..+.
T Consensus 79 ~~l~V~~~~~~~~~--~-~~~~~~g~~~~l~C~~~~~~p~~~~~W~~-~g~~~~ 128 (176)
T 1f2q_A 79 VYLEVFSDWLLLQA--S-AEVVMEGQPLFLRCHGWRNWDVYKVIYYK-DGEALK 128 (176)
T ss_dssp EEEEEECSSEEEEE--S-CSEEETTSCEEEEEEEGGGCCEEEEEEEE-TTEECC
T ss_pred EEEEEeCcceeecC--C-cceeeCCCCEEEEEEecCCCCceEEEEEE-CCEEEe
Confidence 35677756655543 2 24567899999999995 68889999999 777664
No 206
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=98.36 E-value=8.3e-07 Score=45.70 Aligned_cols=46 Identities=24% Similarity=0.561 Sum_probs=32.2
Q ss_pred eEEEE----cCCEEeecCCCceEEecCCCeEEEEeeEeee-cCC-eEEEEeCCCc
Q psy4606 3 YLDVV----VPPDILNEESSSDIMAPEGGTIKLVCKAKGY-PRP-HITWKREDGQ 51 (69)
Q Consensus 3 ~l~V~----~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~-P~P-~~~W~~~~~~ 51 (69)
.|.|. .+|.+... +......+|+.+.|.|.+.|. |.| .+.|++ ++.
T Consensus 115 ~l~V~~~~~~~P~i~~~--~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~-~~~ 166 (220)
T 1pz5_B 115 SVTVSSATTTAPSVYPL--VPGCSDTSGSSVTLGCLVKGYFPEPVTVKWNY-GAL 166 (220)
T ss_dssp EEEECSSCCBCCEEEEE--CCCSCCSCSSSEEEEEEEEEEBSSCCEEEEGG-GTC
T ss_pred EEEEccCCCCCCeEEEc--ccccccCCCCcEEEEEEEEEEeCCCeEEEEec-CCc
Confidence 56666 34555443 212234679999999999996 999 999998 443
No 207
>3rbg_A Cytotoxic and regulatory T-cell molecule; IGV, crtam, structural genomics, PSI-biology, NEW YORK struc genomics research consortium, nysgrc; 2.30A {Homo sapiens}
Probab=98.35 E-value=8.8e-07 Score=42.32 Aligned_cols=36 Identities=25% Similarity=0.449 Sum_probs=30.1
Q ss_pred CceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEE
Q psy4606 18 SSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEI 53 (69)
Q Consensus 18 ~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~ 53 (69)
+..+.+.+|+.+.|.|.+.|.|.|.+.|+++++..+
T Consensus 8 ~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~ 43 (124)
T 3rbg_A 8 TETITVEEGQTLTLKCVTSLRKNSSLQWLTPSGFTI 43 (124)
T ss_dssp EEEEEEETTSCEEEEEECCCCTTCEEEEECTTSCEE
T ss_pred CccEEEcCCCCEEEEeEEeccCCCEEEEECCCCeEE
Confidence 556778899999999999999999999998544433
No 208
>3r08_E T-cell surface glycoprotein CD3 epsilon chain; antibody, T-cell receptor, signalling, immune SY; 4.10A {Cricetulus migratorius}
Probab=98.35 E-value=3.8e-07 Score=41.39 Aligned_cols=34 Identities=21% Similarity=0.520 Sum_probs=27.7
Q ss_pred CceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEE
Q psy4606 18 SSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEII 54 (69)
Q Consensus 18 ~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~ 54 (69)
+....+..|+.++|.|.+.|.|. ++|+| +|..+.
T Consensus 6 p~~~v~~~G~~v~L~C~~~g~P~--i~W~k-dg~~l~ 39 (82)
T 3r08_E 6 IEYKVSISGTSVELTCPLDSDEN--LKWEK-NGQELP 39 (82)
T ss_dssp CCCEEEEETTEEEEECSSCCCSS--CEEEE-TTEECT
T ss_pred CceeEEEcCCeEEEEEECCCCCc--EEEEE-CCEECc
Confidence 44455667999999999999983 99999 787764
No 209
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=98.35 E-value=4.9e-06 Score=44.89 Aligned_cols=47 Identities=23% Similarity=0.432 Sum_probs=36.3
Q ss_pred eeEEEEcCCEEeecCCCceEEecCC---CeEEEEee-EeeecCCeEEEEeC
Q psy4606 2 GYLDVVVPPDILNEESSSDIMAPEG---GTIKLVCK-AKGYPRPHITWKRE 48 (69)
Q Consensus 2 ~~l~V~~~p~~~~~~~~~~~~~~~g---~~~~l~C~-~~g~P~P~~~W~~~ 48 (69)
..|.|..+|.+..........+.+| ..+.|.|. +.|.|.|.+.|+++
T Consensus 123 ~~l~V~~~p~~~~~~~~~~~~~~~g~~~~~~~l~C~~~~~~p~~~i~W~~~ 173 (331)
T 3u83_A 123 LNLTVMAKPTNWIEGTQAVLRAKKGQDDKVLVATCTSANGKPPSVVSWETR 173 (331)
T ss_dssp EEEEEEBCCEEEEEECSSCEEECTTCCCCEEEEEEEEEEEBSCCEEEEEES
T ss_pred EEEEEecCCcceeecCCCceeecCCCccceEEEEEEecCCcCCceEEEEcC
Confidence 4678888887743322556677777 77999998 78899999999983
No 210
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=98.35 E-value=3e-07 Score=49.96 Aligned_cols=32 Identities=28% Similarity=0.377 Sum_probs=27.6
Q ss_pred EecCCCeEEEEeeEeeec-CCeEEEEeCCCcEEE
Q psy4606 22 MAPEGGTIKLVCKAKGYP-RPHITWKREDGQEII 54 (69)
Q Consensus 22 ~~~~g~~~~l~C~~~g~P-~P~~~W~~~~~~~~~ 54 (69)
.+.+|+.+.|.|.+.|.| .|.+.|++ ++..+.
T Consensus 139 ~~~~G~~v~L~C~~~g~p~~~~i~W~k-~~~~l~ 171 (329)
T 3oq3_B 139 GTHDKYGIDLYCGILYAKHYNNITWYK-NNQELI 171 (329)
T ss_dssp TSSTTTCEEEECCCCSCCCCCEEEEEE-TTEECC
T ss_pred EEeCCCcEEEEeccCCCCCCceEEEEE-CCccCC
Confidence 356799999999999999 99999999 776664
No 211
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=98.35 E-value=2.9e-06 Score=49.13 Aligned_cols=50 Identities=22% Similarity=0.470 Sum_probs=32.5
Q ss_pred eeEEEEcCC---EEeecCCCceEEecCCCe-EEEEeeEee-ecCCeEEEEeCCCcEEEec
Q psy4606 2 GYLDVVVPP---DILNEESSSDIMAPEGGT-IKLVCKAKG-YPRPHITWKREDGQEIIIK 56 (69)
Q Consensus 2 ~~l~V~~~p---~~~~~~~~~~~~~~~g~~-~~l~C~~~g-~P~P~~~W~~~~~~~~~~~ 56 (69)
..|.|..+| .+... . .. ...+.. +.|.|.+.| +|.|.++|++ +++.+...
T Consensus 463 ~~l~V~~~~~~p~i~~~--~-~~-~~~~~~~~~l~C~~~~~~P~~~i~W~~-~g~~l~~~ 517 (581)
T 3o3u_N 463 YRVRVYQIPGKPEIVDS--A-SE-LTAGVPNKVGTCVSEGSYPAGTLSWHL-DGKPLVPN 517 (581)
T ss_dssp EEEEEEBCCCCCEEESC--C-SE-ECTTSCEEEEEEEEEEEBSCCEEEEEE-TTEECCTT
T ss_pred EEEEEEcCCCCCEEEcC--C-cc-cccCCceeEEEEECCCCCCCCeEEEEE-CCEECCCC
Confidence 357777643 33322 2 22 344444 567999998 6999999999 78776543
No 212
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=98.35 E-value=1.4e-06 Score=50.27 Aligned_cols=50 Identities=18% Similarity=0.364 Sum_probs=37.3
Q ss_pred eeEEEEcCCEEeecCCCceEEecCCCeEEEEeeEe----eecCCeEEEEeCCCcEEE
Q psy4606 2 GYLDVVVPPDILNEESSSDIMAPEGGTIKLVCKAK----GYPRPHITWKREDGQEII 54 (69)
Q Consensus 2 ~~l~V~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~----g~P~P~~~W~~~~~~~~~ 54 (69)
..|.|..+|..... +....+..|+.+.|.|.+. |.|.|.+.|++ +|..+.
T Consensus 435 ~~l~V~~~~p~~~~--~~~~~v~~G~~v~L~C~~~~~~~~~p~~~v~W~k-~g~~~~ 488 (585)
T 2ocw_A 435 VEIKIIEGEPNLKV--PGNVTAVLGETLKVPCHFPCKFSSYEKYWCKWNN-TGCQAL 488 (585)
T ss_pred EEEEEecCcccccc--CCceeEecCCcEEEEEEecCCCCCCccEEEEEee-cCceee
Confidence 45677654433333 5567788999999999997 78899999999 676553
No 213
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=98.34 E-value=6.8e-07 Score=46.08 Aligned_cols=47 Identities=28% Similarity=0.607 Sum_probs=32.5
Q ss_pred eEEEEc----CCEEeecCCCceEEecCCCeEEEEeeEeee-cCC-eEEEEeCCCcE
Q psy4606 3 YLDVVV----PPDILNEESSSDIMAPEGGTIKLVCKAKGY-PRP-HITWKREDGQE 52 (69)
Q Consensus 3 ~l~V~~----~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~-P~P-~~~W~~~~~~~ 52 (69)
.|.|.. +|.+...+ + ......|+.+.|.|.+.|. |.| .+.|++ +++.
T Consensus 117 ~l~V~~~~~~~P~i~~~~-~-~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~-~g~~ 169 (222)
T 1q9r_B 117 LVTVSAAKTTPPSVYPLA-P-GSAAQTNSMVTLGCLVKGYFPEPVTVTWNS-GSLS 169 (222)
T ss_dssp EEEECSSCCBCCEEEEEC-C-CSCCCCSSEEEEEEEEEEEBSSCCEEEEGG-GTBC
T ss_pred EEEeccCCCCCCeEEEcc-c-cccccCCCcEEEEEEEccEECCCCEEEEec-CCeE
Confidence 566663 45554431 1 1224579999999999995 999 999999 6654
No 214
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=98.34 E-value=1.7e-06 Score=44.87 Aligned_cols=31 Identities=19% Similarity=0.312 Sum_probs=27.7
Q ss_pred CceEEecCCCeEEEEeeEeeecCCeEEEEeC
Q psy4606 18 SSDIMAPEGGTIKLVCKAKGYPRPHITWKRE 48 (69)
Q Consensus 18 ~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~ 48 (69)
+....+.+|+.+.|.|.+.|.|.|.+.|++.
T Consensus 134 p~~~~v~~G~~v~L~C~~~~~p~~~i~W~k~ 164 (238)
T 2p1y_A 134 PQSLTVWEGETAILNCSYENSAFDYFPWYQQ 164 (238)
T ss_dssp CSEEEEETTSCEEEEEECCCTTCCEEEEEEE
T ss_pred CceEEEeCCCeEEEEEEEecCCCCcEEEEEE
Confidence 5567788999999999999999999999984
No 215
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=98.34 E-value=2.7e-06 Score=42.77 Aligned_cols=32 Identities=6% Similarity=0.056 Sum_probs=26.7
Q ss_pred CCeEEEEeeEeeecCCeEEEEeCCCcEEEecCC
Q psy4606 26 GGTIKLVCKAKGYPRPHITWKREDGQEIIIKEG 58 (69)
Q Consensus 26 g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~~~~ 58 (69)
+..+.|.|.+.|.|.|.+.|++ +++.+....+
T Consensus 110 ~~~v~L~C~~~g~p~p~i~W~~-~g~~l~~~~~ 141 (176)
T 1hng_A 110 CSNATLTCEVLEGTDVELKLYQ-GKEHLRSLRQ 141 (176)
T ss_dssp TTTTEEEEECSSCSSCEEEEEE-TTEEEEEESS
T ss_pred CCcEEEEEEecCCCCcEEEEEE-CCEECCCCCc
Confidence 4569999999999999999999 8887765443
No 216
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=98.34 E-value=1.9e-06 Score=45.37 Aligned_cols=37 Identities=16% Similarity=0.397 Sum_probs=31.7
Q ss_pred CCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEe
Q psy4606 9 PPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKR 47 (69)
Q Consensus 9 ~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~ 47 (69)
+|.+... +....+.+|+.++|.|.+.|.|.|.+.|++
T Consensus 138 ~~~~~~~--p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k 174 (256)
T 3umt_A 138 DIQLTQS--PSSLSASLGERVSITCRASQDIGSNLNWLQ 174 (256)
T ss_dssp CCCEEEE--CSEEEECTTCCEEEEEEESSCCTTCEEEEE
T ss_pred ccEEEcC--CCeEEEECCCCEEEEEEEecCCCcEEEEEE
Confidence 5666655 666788999999999999999999999998
No 217
>3p73_B Beta-2-microglobulin; IG-like C1-type (immunoglobulin-like) domain, histocompatibi antigen, immune system; HET: 16A; 1.32A {Gallus gallus} SCOP: b.1.1.0 PDB: 3p77_B* 4g43_B 4g42_B 4e0r_B 3bev_B 3bew_B 3jvg_C* 2yez_B 2yf5_B 2yf6_B 2yf1_B*
Probab=98.34 E-value=6.1e-07 Score=41.86 Aligned_cols=28 Identities=36% Similarity=0.504 Sum_probs=22.8
Q ss_pred CCCeEEEEeeEee-ecCC-eEEEEeCCCcEE
Q psy4606 25 EGGTIKLVCKAKG-YPRP-HITWKREDGQEI 53 (69)
Q Consensus 25 ~g~~~~l~C~~~g-~P~P-~~~W~~~~~~~~ 53 (69)
.|..+.|.|.+.| +|.. .++|.+ +|+.+
T Consensus 17 ~~~~~~L~C~~~gFyP~~i~v~W~~-~g~~~ 46 (99)
T 3p73_B 17 AGTKNVLNCFAAGFHPPKISITLMK-DGVPM 46 (99)
T ss_dssp TTSCEEEEEEEEEESSSCCEEEEEE-TTEEC
T ss_pred CCCCEEEEEEEeeeECCCeEEEEEE-CCeeC
Confidence 4678999999999 5654 799999 77765
No 218
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=98.33 E-value=6.8e-07 Score=46.34 Aligned_cols=47 Identities=28% Similarity=0.580 Sum_probs=31.9
Q ss_pred eEEEEc----CCEEeecCCCceEEecCCCeEEEEeeEeee-cCC-eEEEEeCCCcE
Q psy4606 3 YLDVVV----PPDILNEESSSDIMAPEGGTIKLVCKAKGY-PRP-HITWKREDGQE 52 (69)
Q Consensus 3 ~l~V~~----~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~-P~P-~~~W~~~~~~~ 52 (69)
.|.|.. +|.+.... +.. .+..|+.+.|.|.+.|. |.| .+.|++ ++..
T Consensus 118 ~L~V~~~~~~~P~v~~~~-~~~-~~~~g~~v~L~C~~~g~~P~p~~v~W~~-~~~~ 170 (225)
T 1op3_H 118 VVTVSPASTKGPSVFPLA-PSS-KSTSGGTAALGCLVKDYFPEPVTVSWNS-GALT 170 (225)
T ss_dssp EEEEESCSCBCCEEEEEC-CCT-TCCCCCEEEEEEEEEEEBSSCCEEECCT-TSCC
T ss_pred EEecccCCCcCCeEEEec-ccc-cccCCCcEEEEEEEEeEECCCeEEEEec-CCCc
Confidence 567764 35554321 211 24579999999999995 888 999998 5543
No 219
>1ow0_A IG alpha-1 chain C region; IGA1, fcari, CD89, antibody, immunoglobulin-LIK immune system; HET: NAG FUL BMA GAL SIA FUC MAN NDG; 3.10A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2qej_A*
Probab=98.33 E-value=2.5e-07 Score=47.79 Aligned_cols=47 Identities=19% Similarity=0.403 Sum_probs=31.6
Q ss_pred EcCCEEeecCCCceEEecCCCeEEEEeeEeee-cC-CeEEEEeCCCcEEEe
Q psy4606 7 VVPPDILNEESSSDIMAPEGGTIKLVCKAKGY-PR-PHITWKREDGQEIII 55 (69)
Q Consensus 7 ~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~-P~-P~~~W~~~~~~~~~~ 55 (69)
..+|.+...+ +....+..|..+.|.|.+.|. |. +.+.|++ +|+.+..
T Consensus 104 ~~~P~v~~~~-~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k-~g~~l~~ 152 (214)
T 1ow0_A 104 TFRPEVHLLP-PPSEELALNELVTLTCLARGFSPKDVLVRWLQ-GSQELPR 152 (214)
T ss_dssp CCCCEEEEEC-CCTTTTTSSSEEEEEEEEEEESSSCCEEEEEE-TTEECCG
T ss_pred CCCCEEEecC-CCHHHhccCCceEEEEEEeeeECCCcEEEEEE-CCEECCC
Confidence 3567664331 221224568889999999994 64 4999999 7877643
No 220
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=98.32 E-value=8.5e-07 Score=50.14 Aligned_cols=46 Identities=17% Similarity=0.354 Sum_probs=34.8
Q ss_pred eEEEEcCCEEeecCCCceEEecCCCeEEEEeeEee-ecCCeEEEEeCCCcEE
Q psy4606 3 YLDVVVPPDILNEESSSDIMAPEGGTIKLVCKAKG-YPRPHITWKREDGQEI 53 (69)
Q Consensus 3 ~l~V~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~P~P~~~W~~~~~~~~ 53 (69)
.|.|..+|.+ . +....+.+|+.+.|.|.+.| .|.|.+.|++ ++..+
T Consensus 223 ~l~V~~~p~~--~--~~~~~v~~G~~v~L~C~~~g~~p~p~i~W~k-~g~~l 269 (423)
T 3qs7_E 223 TIDLNQTPQT--T--LPQLFLKVGEPLWIRCKAVHVNHGFGLTWEL-ENKAL 269 (423)
T ss_dssp EEESSSCCCS--S--TTEEEEETTSCEEEEEEEEESSSCCCEEEEE-SSSBC
T ss_pred EEEEecCCcc--C--CCceEEeCCCeEEEEEEEEcCCCCcEEEEEE-CCEEc
Confidence 3455555544 2 44667889999999999999 7889999999 66554
No 221
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=98.32 E-value=2.8e-06 Score=43.09 Aligned_cols=47 Identities=17% Similarity=0.259 Sum_probs=32.8
Q ss_pred eeEEEEc---CCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEE
Q psy4606 2 GYLDVVV---PPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEI 53 (69)
Q Consensus 2 ~~l~V~~---~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~ 53 (69)
..|.|.. +|.+... + ...+.+|+.+.|.|.+.|. .|.+.|+| ++..+
T Consensus 91 ~~l~V~~~~~~p~i~~~--~-~~~v~~G~~v~L~C~~~~~-~~~v~W~k-~g~~~ 140 (198)
T 1ugn_A 91 LELVVTGAYIKPTLSAQ--P-SPVVNSGGNVTLQCDSQVA-FDGFILCK-EGEDE 140 (198)
T ss_dssp EEEEEECSSCCCEEEEE--S-CSEEETTCCEEEEEECSSC-CSEEEEEE-C----
T ss_pred EEEEEcccccCCccccC--C-ccccCCCCcEEEEEecCCC-CcEEEEEE-CCCcc
Confidence 4577776 4565543 2 2467789999999999998 78999999 66554
No 222
>4acp_A IG gamma-1 chain C region; immune system, antibody, kifunensine; HET: NAG; 2.49A {Homo sapiens} PDB: 2j6e_A*
Probab=98.31 E-value=3.1e-07 Score=48.67 Aligned_cols=43 Identities=23% Similarity=0.508 Sum_probs=29.8
Q ss_pred cCCEEeecCCCceEEecCCCeEEEEeeEee-ecCC-eEEEEeCCCcEE
Q psy4606 8 VPPDILNEESSSDIMAPEGGTIKLVCKAKG-YPRP-HITWKREDGQEI 53 (69)
Q Consensus 8 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~P~P-~~~W~~~~~~~~ 53 (69)
.+|.+...+ .......|..+.|.|.+.| +|.+ .+.|++ +|+.+
T Consensus 129 ~~P~V~v~~--~~~~~~~g~~~~L~C~~~gf~P~~i~v~W~k-~g~~~ 173 (240)
T 4acp_A 129 REPQVYTLP--PSRDELTKNQVSLTCLVKGFYPSDIAVEWES-NGQPE 173 (240)
T ss_dssp BCCEEEEEC--CCGGGGGSSEEEEEEEEEEEBSSCCEEEEEE-TTEEC
T ss_pred CCCEEEEEC--CChHHhcCCceEEEEEEeEEeCCCcEEEEEE-CCEEC
Confidence 567665542 1112234889999999999 6776 799999 77664
No 223
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=98.31 E-value=1.3e-06 Score=45.22 Aligned_cols=47 Identities=23% Similarity=0.463 Sum_probs=32.5
Q ss_pred eEEEEc----CCEEeecCCCceEEecCCCeEEEEeeEeee-cC--CeEEEEeCCCcEE
Q psy4606 3 YLDVVV----PPDILNEESSSDIMAPEGGTIKLVCKAKGY-PR--PHITWKREDGQEI 53 (69)
Q Consensus 3 ~l~V~~----~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~-P~--P~~~W~~~~~~~~ 53 (69)
.|.|.. +|.+... + ...+..|..+.|.|.+.|. |. |.+.|++ ++..+
T Consensus 113 ~L~V~~~~~~~P~v~~~--~-~~~~~~g~~v~L~C~~~g~~P~~~~~v~W~~-~~~~~ 166 (220)
T 2fbj_H 113 LVTVSAESARNPTIYPL--T-LPPALSSDPVIIGCLIHDYFPSGTMNVTWGK-SGKDI 166 (220)
T ss_dssp EEEECSSCCBCCEEEEE--C-CCSSSCCSSEEEEEEEEEEBSCCCEEEEESC-CCSSC
T ss_pred EEEecCCCCCCCEEEEe--e-cccccCCCcEEEEEEEEeEECCCcEEEEEec-CCEec
Confidence 566663 4555443 2 1224679999999999995 87 7999999 56543
No 224
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=98.30 E-value=3.5e-07 Score=47.35 Aligned_cols=49 Identities=22% Similarity=0.439 Sum_probs=27.3
Q ss_pred eEEEEc---CCEEeecCCCceEEecCCCeEEEEeeEeee-cCC-eEEEEeCCCcEEE
Q psy4606 3 YLDVVV---PPDILNEESSSDIMAPEGGTIKLVCKAKGY-PRP-HITWKREDGQEII 54 (69)
Q Consensus 3 ~l~V~~---~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~-P~P-~~~W~~~~~~~~~ 54 (69)
.|.|.. +|.+...+ + ......|+.+.|.|.+.|. |.| .+.|++ +|..+.
T Consensus 125 ~l~V~~~~~~p~v~~~~-~-~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k-~g~~~~ 178 (233)
T 3bqu_C 125 NLEIKRADAAPTVSIFP-P-SSEQLTSGGASVVCFLNNFYPKDINVKWKI-DGSERQ 178 (233)
T ss_dssp BC---CCCBCCEEEEEC-C-CHHHHHTTEEEEEEEEEEEBSSCEEEEEEE-C-----
T ss_pred EEEEeCCCCCCEEEEeC-C-CHHhhcCCceEEEEEEccccCCceEEEEEE-CCeeCC
Confidence 355553 56665431 1 1122368899999999995 554 799999 776654
No 225
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=98.30 E-value=6.5e-06 Score=41.20 Aligned_cols=32 Identities=9% Similarity=0.135 Sum_probs=27.2
Q ss_pred EEecCCCeEEEEeeEeeecCCeEEEEeCCCcEE
Q psy4606 21 IMAPEGGTIKLVCKAKGYPRPHITWKREDGQEI 53 (69)
Q Consensus 21 ~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~ 53 (69)
..+.+|+.+.|.|.+.|.|.|.+.|++ ++..+
T Consensus 107 ~~v~~g~~~~l~C~~~~~p~~~v~W~~-~~~~~ 138 (184)
T 2ny1_B 107 THLLQGQSLTLTLESPPGSSPSVQCRS-PRGKN 138 (184)
T ss_dssp SEEETTCCEEEEEECCTTCCCEEEEEC-TTSCE
T ss_pred ceeecCCCEEEEEEcCCCCCCEEEEEe-CCCcc
Confidence 466789999999999999999999999 55443
No 226
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=98.30 E-value=1.7e-06 Score=42.70 Aligned_cols=43 Identities=21% Similarity=0.337 Sum_probs=32.9
Q ss_pred CEEeecCCCceEEecCCCeEEEEeeEeeec-CCeEEEEeCCCcEEEe
Q psy4606 10 PDILNEESSSDIMAPEGGTIKLVCKAKGYP-RPHITWKREDGQEIII 55 (69)
Q Consensus 10 p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P-~P~~~W~~~~~~~~~~ 55 (69)
|.+... +....+.+|+.+.|.|.+.|.| .+.+.|++ ++..+..
T Consensus 5 p~i~~~--p~~~~v~~G~~v~l~C~~~~~p~~~~~~W~~-~g~~~~~ 48 (170)
T 3ry4_A 5 AVLKLE--PPWINVLQEDSVTLTCQGARSPESDSIQWFH-NGNLIPT 48 (170)
T ss_dssp CEEEEE--SCCSEEETTCEEEEEEESCCCSSSSCEEEEE-TTEECTT
T ss_pred CEEEeC--CCCeEEECCCcEEEEEEecCCCCcceEEEEE-CCeEccc
Confidence 344444 5555678999999999999987 67999999 7776643
No 227
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=98.30 E-value=2.1e-06 Score=44.51 Aligned_cols=49 Identities=20% Similarity=0.454 Sum_probs=32.7
Q ss_pred eEEEEc----CCEEeecCCCceEEecCCCeEEEEeeEeee-cCC-eEEEEeCCCcEE
Q psy4606 3 YLDVVV----PPDILNEESSSDIMAPEGGTIKLVCKAKGY-PRP-HITWKREDGQEI 53 (69)
Q Consensus 3 ~l~V~~----~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~-P~P-~~~W~~~~~~~~ 53 (69)
.|.|.. +|.+...+ +. ..+..|+.+.|.|.+.|. |.| .+.|++.+|..+
T Consensus 116 ~L~V~~~~~~~P~i~~~~-~~-~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~g~~l 170 (223)
T 1dee_B 116 LVTVSSGSASAPTLFPLV-SC-ENSNPSSTVAVGCLAQDFLPDSITFSWKYKNNSDI 170 (223)
T ss_dssp EEEECSSCCBCCEEEEEE-CT-TCCCSSSEEEEEEEEEEEBSSCCEEEEEETTSCBC
T ss_pred EEEEccCCCCCCEEEEec-CC-cccCCCCcEEEEEEEEEEeCCCeEEEeEccCCCcc
Confidence 566762 45554321 11 123578999999999995 888 999999455544
No 228
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=98.30 E-value=5.5e-07 Score=50.82 Aligned_cols=45 Identities=20% Similarity=0.371 Sum_probs=29.6
Q ss_pred EcCCEEeecCCCceEEecCCCeEEEEeeEeeecCC--eEEEEeCCCcEEE
Q psy4606 7 VVPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRP--HITWKREDGQEII 54 (69)
Q Consensus 7 ~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P--~~~W~~~~~~~~~ 54 (69)
..+|.+...+ +....+ .++.+.|.|.+.|.|.| .+.|++ +|..+.
T Consensus 353 ~~~P~v~~~~-~~~~~~-~~~~~~l~C~~~g~~p~~~~v~W~k-~g~~l~ 399 (457)
T 1hzh_H 353 PREPQVYTLP-PSRDEL-TKNQVSLTCLVKGFYPSDIAVEWES-NGQPEN 399 (457)
T ss_dssp CBCCEEEEEC-CCGGGG-GSSEEEEEEEEEEEBSSCCEEEEEE-TTEECC
T ss_pred CCCCeEEEEC-CCcccc-CCCcEEEEEEEEeEECCCCEEEEEE-CCEECc
Confidence 4577765542 221123 34459999999996544 899999 787764
No 229
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=98.30 E-value=5.6e-07 Score=47.28 Aligned_cols=49 Identities=24% Similarity=0.444 Sum_probs=32.7
Q ss_pred eEEEEc---CCEEeecCCCceEEecCCCeEEEEeeEee-ecCC-eEEEEeCCCcEEE
Q psy4606 3 YLDVVV---PPDILNEESSSDIMAPEGGTIKLVCKAKG-YPRP-HITWKREDGQEII 54 (69)
Q Consensus 3 ~l~V~~---~p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~P~P-~~~W~~~~~~~~~ 54 (69)
.|.|.. +|.+...+ + ......|+.+.|.|.+.| .|.| .+.|++ +|+.+.
T Consensus 141 ~l~V~~~~~~P~v~~~~-~-~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k-~g~~~~ 194 (252)
T 3bkj_L 141 KLELKRADAAPTVSIFP-P-SSEQLTSGGASVVCFLNNFYPKDINVKWKI-DGSERQ 194 (252)
T ss_dssp EEEECCCCBCCEEEEEC-C-CHHHHHHTEEEEEEEEEEEBSSCCEEEEEE-TTEEEC
T ss_pred EEEEeCCCcCcEEEEeC-C-ChhhcCCCcEEEEEEEeeEeCCCcEEEEEE-CCeecC
Confidence 466653 56665431 1 112336889999999999 5655 799999 777654
No 230
>3jts_B Beta-2-microglobulin; alpha helix, beta sheet, beta barrel, immune response, MHC I membrane, transmembrane, disease mutation; 2.80A {Homo sapiens}
Probab=98.29 E-value=1.2e-06 Score=42.21 Aligned_cols=42 Identities=24% Similarity=0.363 Sum_probs=28.8
Q ss_pred cCCEEeecCCCceEEecCCCeEEEEeeEee-ecCC-eEEEEeCCCcEE
Q psy4606 8 VPPDILNEESSSDIMAPEGGTIKLVCKAKG-YPRP-HITWKREDGQEI 53 (69)
Q Consensus 8 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~P~P-~~~W~~~~~~~~ 53 (69)
.+|.+...+ .. ....|..++|.|.+.| +|.. .++|.+ ||+.+
T Consensus 23 ~~P~V~v~~-~~--~~~~g~~~~L~C~~~gFyP~~I~v~W~k-nG~~~ 66 (119)
T 3jts_B 23 RTPKIQVYS-RH--PAENGKSNFLNCYVSGFHPSDIEVDLLK-NGERI 66 (119)
T ss_dssp BCCEEEEEE-SS--CCCTTSCEEEEEEEEEEBSSCCEEEEEE-TTEEC
T ss_pred cCCEEEEEc-cC--cccCCCcEEEEEEEeCccCCCEEEEEEE-CCEEC
Confidence 567665421 11 1235678999999999 6664 799999 78765
No 231
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=98.29 E-value=7.4e-07 Score=46.72 Aligned_cols=50 Identities=24% Similarity=0.410 Sum_probs=32.7
Q ss_pred eEEEEc---CCEEeecCCCceEEecCCCeEEEEeeEee-ecC-CeEEEEeCCCcEEEe
Q psy4606 3 YLDVVV---PPDILNEESSSDIMAPEGGTIKLVCKAKG-YPR-PHITWKREDGQEIII 55 (69)
Q Consensus 3 ~l~V~~---~p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~P~-P~~~W~~~~~~~~~~ 55 (69)
.|.|.. +|.+... ........|+.+.|.|.+.| .|. +.++|++ +|..+..
T Consensus 145 ~l~V~~~~~~P~v~~~--~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k-~g~~l~~ 199 (254)
T 2c1o_A 145 KLELKRADAAPTVSIF--PPSSEQLTSGGASVVCFLNNFYPKDINVKWKI-DGSERQN 199 (254)
T ss_dssp EEEECCCCBCCEEEEE--CCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEE-SSSEECT
T ss_pred EEEECCCCCCCeeEee--cCChhhccCCcEEEEEEEecccCCCcEEEEEE-CCCcccC
Confidence 466653 5666543 21122235779999999999 454 4699999 7777643
No 232
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=98.29 E-value=6e-06 Score=42.72 Aligned_cols=30 Identities=27% Similarity=0.609 Sum_probs=27.1
Q ss_pred CceEEecCCCeEEEEeeEeeecCCeEEEEe
Q psy4606 18 SSDIMAPEGGTIKLVCKAKGYPRPHITWKR 47 (69)
Q Consensus 18 ~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~ 47 (69)
+....+..|+.+.|.|.+.|.|.|.+.|++
T Consensus 121 ~~~~~~~~g~~v~L~C~~~~~p~p~v~W~~ 150 (241)
T 3grw_A 121 PANQTAVLGSDVEFHCKVYSDAQPHIQWLK 150 (241)
T ss_dssp TCSEECCTTCCEEEEEEEECSSCCEEEEEE
T ss_pred CccceecCCCEEEEEEEEecCCCCEEEEEE
Confidence 455678889999999999999999999998
No 233
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=98.29 E-value=2.8e-06 Score=44.36 Aligned_cols=30 Identities=20% Similarity=0.499 Sum_probs=27.1
Q ss_pred CceEEecCCCeEEEEeeEeeecCCeEEEEe
Q psy4606 18 SSDIMAPEGGTIKLVCKAKGYPRPHITWKR 47 (69)
Q Consensus 18 ~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~ 47 (69)
+....+.+|+.+.|.|.+.|.|.|.+.|++
T Consensus 142 ~~~~~v~~G~~v~L~C~~~~~~~~~v~W~k 171 (247)
T 2ghw_B 142 PATLSLSPGERATLSCRASQSVRSNLAWYQ 171 (247)
T ss_dssp CSEEEECTTSCEEEEEEESSCCTTCEEEEE
T ss_pred CCEEEecCCCcEEEEEEeCCCccceEEEEE
Confidence 556678899999999999999999999998
No 234
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=98.29 E-value=1.3e-06 Score=45.61 Aligned_cols=51 Identities=27% Similarity=0.493 Sum_probs=34.5
Q ss_pred eEEEEc------CCEEeecCCCceEEecCCCeEEEEeeEeeecCC--eEEEEeCCCcEEEe
Q psy4606 3 YLDVVV------PPDILNEESSSDIMAPEGGTIKLVCKAKGYPRP--HITWKREDGQEIII 55 (69)
Q Consensus 3 ~l~V~~------~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P--~~~W~~~~~~~~~~ 55 (69)
.|.|.. +|.+.... +....+..|..+.|.|.+.|.|.| .+.|++ +|..+..
T Consensus 112 ~l~V~~~~~~~~~P~i~~~~-~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k-~g~~l~~ 170 (246)
T 4dzb_B 112 RLTVLEDLKNVFPPEVAVFE-PSEAEISHTQKATLVCLATGFYPDHVELSWWV-NGKEVHS 170 (246)
T ss_dssp EEEEESCGGGCBCCEEEEEC-CCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEE-TTEEECT
T ss_pred EEEEecCCCcccCCceEeec-CCchhccCCCcEEEEEEEccCcCCceEEEEEE-CCEECCC
Confidence 466663 55554321 333334568999999999997654 899999 7877653
No 235
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=98.29 E-value=5.6e-06 Score=41.43 Aligned_cols=36 Identities=31% Similarity=0.564 Sum_probs=29.2
Q ss_pred CceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEE
Q psy4606 18 SSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEII 54 (69)
Q Consensus 18 ~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~ 54 (69)
+....+.+|+.+.|.|.+.|.|. .+.|++.++..+.
T Consensus 9 ~~~~~v~~G~~v~L~C~~~~~p~-~v~W~~~~~~~~~ 44 (189)
T 2v44_A 9 LSKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKII 44 (189)
T ss_dssp CSEEEEETTCCEEEEEEEEECCS-EEEEECTTSCBCC
T ss_pred CCceEEecCCcEEEEEEeecCCe-eEEEEeCCCCccC
Confidence 44566789999999999999988 8999995565554
No 236
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=98.29 E-value=3.3e-06 Score=48.29 Aligned_cols=48 Identities=23% Similarity=0.385 Sum_probs=38.6
Q ss_pred eeEEEE----cCCEEeecCCCceEEecCCCeEEEEeeEeeecCCe-EEEEeCCCcE
Q psy4606 2 GYLDVV----VPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPH-ITWKREDGQE 52 (69)
Q Consensus 2 ~~l~V~----~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~-~~W~~~~~~~ 52 (69)
..|.|. .+|.+... +....+.+|+.+.|.|.+.|.|.|. +.|++ ++..
T Consensus 200 ~~l~V~~~~~~~p~i~~~--~~~~~v~~G~~v~L~C~~~g~p~p~~i~W~~-~~~~ 252 (524)
T 2ec8_A 200 FILKVRPAFKAVPVVSVS--KASYLLREGEEFTVTCTIKDVSSSVYSTWKR-ENSQ 252 (524)
T ss_dssp EECCEECCCCSCCEEECS--CSEEEEETTSCEEEEEEEEESSTTCEEEEEE-TTCS
T ss_pred EEEEEEeCCCCCCcEEec--CCcceEEcCCcEEEEEEEecCCCcEEEEEEe-CCCC
Confidence 356665 67888765 5566888999999999999999997 99999 5544
No 237
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=98.27 E-value=7.2e-06 Score=42.00 Aligned_cols=44 Identities=32% Similarity=0.592 Sum_probs=33.0
Q ss_pred eEEEEcC----CEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEe
Q psy4606 3 YLDVVVP----PDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKR 47 (69)
Q Consensus 3 ~l~V~~~----p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~ 47 (69)
.|.|..+ |.+... .+....+..|..+.|.|.+.|.|.|.+.|++
T Consensus 107 ~l~V~~~~~~~p~~~~~-~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~ 154 (231)
T 3ojm_B 107 HLDVVERSRHRPILQAG-LPANASTVVGGDVEFVCKVYSDAQPHIQWIK 154 (231)
T ss_dssp EEEEECCCCCCCEECTT-CSCCEEEETTCCEEEECCEECSSCCEEEEEE
T ss_pred EEEEEcCCCCCCceeec-cCCceEEEeCCcEEEEEEEecCCCCEEEEEE
Confidence 4566642 333322 2456778899999999999999999999998
No 238
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=98.26 E-value=1.2e-06 Score=45.21 Aligned_cols=48 Identities=25% Similarity=0.520 Sum_probs=32.5
Q ss_pred eeEEEEc----CCEEeecCCCceEEecCCCeEEEEeeEeee-cCC-eEEEEeCCCcE
Q psy4606 2 GYLDVVV----PPDILNEESSSDIMAPEGGTIKLVCKAKGY-PRP-HITWKREDGQE 52 (69)
Q Consensus 2 ~~l~V~~----~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~-P~P-~~~W~~~~~~~ 52 (69)
..|.|.. +|.+...+ +. ..+..|..+.|.|.+.|. |.| .+.|++ ++..
T Consensus 111 ~~L~V~~~~~~~P~i~~~~-~~-~~~~~g~~v~L~C~~~g~~P~p~~v~W~~-~g~~ 164 (215)
T 1c5d_H 111 TMVTVSSAQTTAPSVYPLA-PG-CGDTTSSTVTLGCLVKGYFPEPVTVTWNS-GALS 164 (215)
T ss_dssp EEEEECSSCCBCCCEEEEC-CC-SSCCCCSSEEEEEEEEEEBSSCCEEEEGG-GTTC
T ss_pred EEEEecCCCCCCCeEEecc-CC-hhhccCCcEEEEEEEeeeEcCCcEEEEcc-CCcc
Confidence 3567763 45554321 11 124578999999999995 999 999998 5543
No 239
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=98.26 E-value=3.7e-07 Score=49.53 Aligned_cols=54 Identities=19% Similarity=0.126 Sum_probs=37.4
Q ss_pred eeEEEEcCCEEeecCCCceEEecCCCeEEEEee-----EeeecCCeEEEEeCCCcEEEec
Q psy4606 2 GYLDVVVPPDILNEESSSDIMAPEGGTIKLVCK-----AKGYPRPHITWKREDGQEIIIK 56 (69)
Q Consensus 2 ~~l~V~~~p~~~~~~~~~~~~~~~g~~~~l~C~-----~~g~P~P~~~W~~~~~~~~~~~ 56 (69)
..|.|..+|............+..|+.+.|.|. +.|.|.|.+.|++ ++..+...
T Consensus 111 ~~l~V~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~g~p~~~v~W~k-~g~~~~~~ 169 (339)
T 3o4o_C 111 IELRVFENTDAFLPFISYPQILTLSTSGVLVCPDLSEFTRDKTDVKIQWYK-DSLLLDKD 169 (339)
T ss_dssp EEEEEECSCGGGHHHHCEEEEEETTSCEEEECCSCTTTCCSSSCCCBCCEE-SSCBCCTT
T ss_pred EEEEEEcCCCccccccccceEEECCCCEEEEecCCcccccCCCCceEEEec-CCeeCCCC
Confidence 356666655432110122346788999999999 8899999999999 77776544
No 240
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=98.26 E-value=1.5e-06 Score=44.41 Aligned_cols=47 Identities=28% Similarity=0.614 Sum_probs=32.4
Q ss_pred eEEEE----cCCEEeecCCCceEEecCCCeEEEEeeEeee-cCC-eEEEEeCCCcE
Q psy4606 3 YLDVV----VPPDILNEESSSDIMAPEGGTIKLVCKAKGY-PRP-HITWKREDGQE 52 (69)
Q Consensus 3 ~l~V~----~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~-P~P-~~~W~~~~~~~ 52 (69)
.|.|. .+|.+... +....+..|+.+.|.|.+.|. |.| .+.|++ ++..
T Consensus 108 ~l~V~~~~~~~P~v~~~--~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~-~~~~ 160 (210)
T 3d9a_H 108 LVTVSAAKTTPPSVYPL--APGSAAQTNSMVTLGCLVKGYFPEPVTVTWNS-GSLS 160 (210)
T ss_dssp EEEECCCCCBCCEEEEE--CCTTSCCCSSEEEEEEEEEEEBSSCCEEEEGG-GTBC
T ss_pred EEEeccCCCCCCEEEEe--cCCcccccCCcEEEEEEEeeEecCCcEEEEee-CCcc
Confidence 46665 24555443 211234679999999999996 999 999998 5543
No 241
>3o81_A Beta-2-microglobulin; IG-like C1-type (immunoglobulin-like) domain, histocompatibi antigen, MHC class I molecule from B21 chicken, immune SYST; 2.00A {Gallus gallus}
Probab=98.26 E-value=7.5e-07 Score=42.92 Aligned_cols=42 Identities=29% Similarity=0.370 Sum_probs=28.2
Q ss_pred cCCEEeecCCCceEEecCCCeEEEEeeEee-ecCC-eEEEEeCCCcEE
Q psy4606 8 VPPDILNEESSSDIMAPEGGTIKLVCKAKG-YPRP-HITWKREDGQEI 53 (69)
Q Consensus 8 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~P~P-~~~W~~~~~~~~ 53 (69)
.+|.+...+ .. ....|..+.|.|.+.| +|.. .++|.+ ||+.+
T Consensus 23 ~~P~V~v~~-~~--~~~~g~~~~L~C~v~gFyP~~I~v~W~k-nG~~~ 66 (119)
T 3o81_A 23 LTPKVQVYS-RF--PASAGTKNVLNCFAAGFHPPKISITLMK-DGVPM 66 (119)
T ss_dssp CSCEEEEEE-SS--CCCTTSCEEEEEEEEEESSSCCEEEEEE-TTEEC
T ss_pred cCCceEEEc-CC--cccCCCcEEEEEEEecccCCCcEEEEEE-CCEEC
Confidence 567665421 11 1234678999999999 5654 799999 78765
No 242
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=98.26 E-value=1.2e-06 Score=44.11 Aligned_cols=35 Identities=17% Similarity=0.453 Sum_probs=30.1
Q ss_pred CceEEecCCCeEEEEee-EeeecC-CeEEEEeCCCcEE
Q psy4606 18 SSDIMAPEGGTIKLVCK-AKGYPR-PHITWKREDGQEI 53 (69)
Q Consensus 18 ~~~~~~~~g~~~~l~C~-~~g~P~-P~~~W~~~~~~~~ 53 (69)
+....+.+|+.+.|.|. +.|.|. +.+.|++ ++..+
T Consensus 15 ~~~~~v~~G~~v~L~C~~~~~~p~~~~v~W~~-~~~~~ 51 (201)
T 3s97_C 15 RPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLL-NEFPV 51 (201)
T ss_dssp CCCEEEETTCCEEECCCCCSEESSCCEEEEEE-SSTTC
T ss_pred CceEEEECCCCEEEeccccccCCCceEEEEEE-CCcee
Confidence 56678899999999999 899999 9999999 55444
No 243
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=98.26 E-value=4e-06 Score=44.75 Aligned_cols=48 Identities=13% Similarity=0.140 Sum_probs=36.2
Q ss_pred CCEEeecCCCceEEecCCCeEEEEeeEe-eecCCeEEEEeCCCcEEEecCC
Q psy4606 9 PPDILNEESSSDIMAPEGGTIKLVCKAK-GYPRPHITWKREDGQEIIIKEG 58 (69)
Q Consensus 9 ~p~~~~~~~~~~~~~~~g~~~~l~C~~~-g~P~P~~~W~~~~~~~~~~~~~ 58 (69)
+|.+...+ .....+.+|+.+.|.|.+. |.|.|.+.|++ ++..+....+
T Consensus 106 ~p~~~~~~-~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~-~~~~i~~~~~ 154 (312)
T 2y23_A 106 FPTVPVKS-ELAVEILEKGQVRFWMQAEKLSGNAKVNYIF-NEKEIFEGPK 154 (312)
T ss_dssp SCBCCEEE-EEEEEECSSSCEEEEEEESCCCSSCEEEEEE-TTEEECSSSS
T ss_pred CCcccccc-CCceEEeeCCCEEEEEEEEeCCCCCEEEEEE-CCEECeeCCc
Confidence 55544331 2367788999999999999 89999999999 7877765443
No 244
>1oga_E TRBC1, T-cell receptor beta chain C region; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2vlm_E 2vlk_E 2vlj_E 2vlr_E 2xna_B 2xn9_B 2axh_A 2axj_A 3scm_D* 3sda_D* 3sdc_D* 3sdd_D* 3qi9_D* 3mff_B* 2ak4_E 3he7_D* 2eyr_B 3pqy_E 3kxf_E 2cde_B ...
Probab=98.25 E-value=7.8e-07 Score=46.88 Aligned_cols=44 Identities=32% Similarity=0.646 Sum_probs=30.0
Q ss_pred CCEEeecCCCceEEecCCCeEEEEeeEee-ecCC-eEEEEeCCCcEEE
Q psy4606 9 PPDILNEESSSDIMAPEGGTIKLVCKAKG-YPRP-HITWKREDGQEII 54 (69)
Q Consensus 9 ~p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~P~P-~~~W~~~~~~~~~ 54 (69)
+|.+.... +....+..|..+.|.|.+.| .|.| .+.|++ +|+.+.
T Consensus 122 ~P~v~~~~-~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~~-~g~~l~ 167 (252)
T 1oga_E 122 PPEVAVFE-PSEAEISHTQKATLVCLATGFYPDHVELSWWV-NGKEVH 167 (252)
T ss_dssp CCEEEEEC-CCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEE-TTEEEC
T ss_pred CCeEEEEC-CChhhhccCCceEEEEEEeeEcCCCcEEEEEE-CCEECC
Confidence 55554321 22222346889999999999 4765 999999 787664
No 245
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=98.25 E-value=7.7e-06 Score=41.58 Aligned_cols=30 Identities=13% Similarity=0.328 Sum_probs=24.3
Q ss_pred CCC-eEEEEeeEee-ecCCeEEEEeCCCcEEEe
Q psy4606 25 EGG-TIKLVCKAKG-YPRPHITWKREDGQEIII 55 (69)
Q Consensus 25 ~g~-~~~l~C~~~g-~P~P~~~W~~~~~~~~~~ 55 (69)
.|. .+.|.|.+.| .|.|.+.|++ +++.+..
T Consensus 122 ~g~~~v~L~C~~~g~~p~p~i~W~~-~g~~l~~ 153 (193)
T 2if7_A 122 NMTCELHLTCSVEDADDNVSFRWEA-LGNTLSS 153 (193)
T ss_dssp CSSEEEEEEEEEESCCTTCEEEEEE-TTEEEES
T ss_pred CCCceEEEEEEEecCCCceEEEEEe-CCEEcCC
Confidence 354 7999999999 5689999999 7776653
No 246
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=98.25 E-value=1.8e-06 Score=43.74 Aligned_cols=31 Identities=39% Similarity=0.835 Sum_probs=28.0
Q ss_pred CceEEecCCCeEEEEeeEeeecCCeEEEEeC
Q psy4606 18 SSDIMAPEGGTIKLVCKAKGYPRPHITWKRE 48 (69)
Q Consensus 18 ~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~ 48 (69)
+....+.+|+.+.|.|.+.|.|.|.+.|++.
T Consensus 8 ~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~ 38 (212)
T 1f97_A 8 QSDVQVPENESIKLTCTYSGFSSPRVEWKFV 38 (212)
T ss_dssp CSEEEEETTCCEEEECEEESCSSEEEEEEEE
T ss_pred CCCeEEEcCCCEEEEeEeCCCCCcEEEEEEC
Confidence 5667788999999999999999999999994
No 247
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=98.24 E-value=3.3e-06 Score=43.81 Aligned_cols=47 Identities=28% Similarity=0.544 Sum_probs=30.7
Q ss_pred eeEEEEc----CCEEeecCCCceEEecCCCeEEEEeeEeee-cCC-eEEEEeCCCc
Q psy4606 2 GYLDVVV----PPDILNEESSSDIMAPEGGTIKLVCKAKGY-PRP-HITWKREDGQ 51 (69)
Q Consensus 2 ~~l~V~~----~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~-P~P-~~~W~~~~~~ 51 (69)
..|.|.. +|.+...+ + ...+..|+.+.|.|.+.|. |.| .+.|++ ++.
T Consensus 119 ~~L~V~~~~~~~P~i~~~~-~-~~~~~~g~~~~l~C~~~g~~P~p~~v~W~~-~~~ 171 (228)
T 3bae_H 119 TTLTVSSAKTTAPSVYPLA-P-VCGDTTGSSVTLGCLVKGYFPEPVTLTWNS-GSL 171 (228)
T ss_dssp EEEEECSCCCBCCEEEEEC-C------CCSEEEEEEEEEEEBSSCCEEEEGG-GTC
T ss_pred EEEEecCCCCCCCEEEEec-c-cccccCCCCEEEEEEEccEeCCCEEEEEee-CCc
Confidence 3566763 46555431 2 2234679999999999995 988 999998 554
No 248
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=98.24 E-value=6.6e-07 Score=47.73 Aligned_cols=47 Identities=28% Similarity=0.576 Sum_probs=25.4
Q ss_pred eEEEEc----CCEEeecCCCceEEecCCCeEEEEeeEeee-cCC-eEEEEeCCCcE
Q psy4606 3 YLDVVV----PPDILNEESSSDIMAPEGGTIKLVCKAKGY-PRP-HITWKREDGQE 52 (69)
Q Consensus 3 ~l~V~~----~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~-P~P-~~~W~~~~~~~ 52 (69)
.|.|.. +|.+.... +. ..+..|..+.|.|.+.|. |.| .+.|++ ++..
T Consensus 123 ~L~V~~~~~~~P~v~~~~-p~-~~~~~g~~v~L~C~~~g~~P~pi~v~W~k-~g~~ 175 (257)
T 3bn9_D 123 MVTVSSASTKGPSVFPLA-PS-SKSTSGGTAALGCLVKDYFPEPVTVSWNS-GALT 175 (257)
T ss_dssp EEEECSSCCBCCEECCCC-C------------CCCEEEEEBSSCCEEEETT-TTCC
T ss_pred EEEecCCCCcCCcEEEec-Cc-ccccCCCcEEEEEEEeeEECCCcEEEEee-CCCc
Confidence 566764 46654331 22 234578999999999994 888 999999 5554
No 249
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=98.24 E-value=2e-06 Score=45.53 Aligned_cols=50 Identities=28% Similarity=0.512 Sum_probs=33.8
Q ss_pred eEEEEc------CCEEeecCCCceEEecCCCeEEEEeeEeeecC-C-eEEEEeCCCcEEE
Q psy4606 3 YLDVVV------PPDILNEESSSDIMAPEGGTIKLVCKAKGYPR-P-HITWKREDGQEII 54 (69)
Q Consensus 3 ~l~V~~------~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~-P-~~~W~~~~~~~~~ 54 (69)
.|.|.. +|.+.... +....+..|+.+.|.|.+.|.|. | .+.|++ +|+.+.
T Consensus 133 ~l~V~~~~~~~~~P~v~~~~-~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~~-~g~~l~ 190 (268)
T 3pl6_D 133 RLTVLEDLKNVFPPEVAVFE-PSEAEISHTQKATLVCLATGFYPDHVELSWWV-NGKEVH 190 (268)
T ss_dssp EEEEESCGGGCBCCEEEEEC-CCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEE-SSSEEC
T ss_pred EEEEecCcccccCCceEEeC-CCcccccCCCceEEEEEECcccCCCeEEEEEE-CCEECC
Confidence 466664 56544321 33333445899999999999555 4 899999 787774
No 250
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=98.23 E-value=5.6e-06 Score=41.67 Aligned_cols=41 Identities=12% Similarity=0.197 Sum_probs=32.4
Q ss_pred EcCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcE
Q psy4606 7 VVPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQE 52 (69)
Q Consensus 7 ~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~ 52 (69)
..+|.+... +.. .+.+|+.+.|.|.+.| |.|.+.|+| ++..
T Consensus 6 ~~~P~i~~~--p~~-~v~~G~~v~L~C~~~~-~~~~~~W~k-~g~~ 46 (184)
T 2gi7_A 6 LPKPSLQAL--PSS-LVPLEKPVTLRCQGPP-GVDLYRLEK-LSSS 46 (184)
T ss_dssp BCCCEEEEE--SCS-EEETTCCEEEEEECST-TCSEEEEEE-TTTC
T ss_pred CCCCeEEeC--CCc-cccCCCcEEEEEeCCC-CCCEEEEEE-CCcc
Confidence 457777765 433 6789999999999988 889999999 5543
No 251
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=98.23 E-value=1.5e-06 Score=46.12 Aligned_cols=50 Identities=32% Similarity=0.579 Sum_probs=34.3
Q ss_pred eEEEEc------CCEEeecCCCceEEecCCCeEEEEeeEee-ecCC-eEEEEeCCCcEEE
Q psy4606 3 YLDVVV------PPDILNEESSSDIMAPEGGTIKLVCKAKG-YPRP-HITWKREDGQEII 54 (69)
Q Consensus 3 ~l~V~~------~p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~P~P-~~~W~~~~~~~~~ 54 (69)
.|.|.. +|.+.... +....+..|..+.|.|.+.| .|.| .+.|++ +|+.+.
T Consensus 136 ~l~V~~~~~~~~~P~v~~~~-~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k-~g~~l~ 193 (270)
T 3qib_D 136 RLLVLEDLKNVFPPEVAVFE-PSEAEISHTQKATLVCLATGFYPDHVELSWWV-NGKEVH 193 (270)
T ss_dssp EEEEESCSTTCBCCEEEEEE-CCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEE-TTEEEC
T ss_pred EEEEccccccccCCceEEEC-CCccccccCCceEEEEEecceeCCCeEEEEEE-CCEECC
Confidence 466665 56544321 22223345899999999999 7878 899999 787774
No 252
>1jhl_L IGG1-kappa D11.15 FV (light chain); complex(antibody-antigen); 2.40A {Mus musculus} SCOP: b.1.1.1
Probab=98.22 E-value=3.2e-06 Score=39.41 Aligned_cols=31 Identities=29% Similarity=0.541 Sum_probs=27.4
Q ss_pred CceEEecCCCeEEEEeeEeeecCCeEEEEeC
Q psy4606 18 SSDIMAPEGGTIKLVCKAKGYPRPHITWKRE 48 (69)
Q Consensus 18 ~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~ 48 (69)
+..+.+.+|+.++|.|.+.+.|.|.+.|++.
T Consensus 8 p~~~~~~~G~~v~L~C~~~~~~~~~v~W~r~ 38 (108)
T 1jhl_L 8 PSYLVASPGETITINCRASKSISKSLAWYQE 38 (108)
T ss_dssp CSEEEECTTSCEEEEEEESSCCTTCEEEEEE
T ss_pred CCeeEEcCCCCEEEEeEECCCCCceEEEEEE
Confidence 5557788999999999999999999999984
No 253
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=98.22 E-value=1.8e-06 Score=50.13 Aligned_cols=46 Identities=17% Similarity=0.341 Sum_probs=36.0
Q ss_pred eEEEEcCCEEeecCCCceEEecCCCeEEEEeeEe-eecCCeEEEEeCCCcEE
Q psy4606 3 YLDVVVPPDILNEESSSDIMAPEGGTIKLVCKAK-GYPRPHITWKREDGQEI 53 (69)
Q Consensus 3 ~l~V~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~-g~P~P~~~W~~~~~~~~ 53 (69)
.|.|..+|.+ . +....+.+|+.+.|.|.+. |.|.|.++|++ ++..+
T Consensus 223 ~l~V~~~p~~--~--p~~~~v~~G~~v~L~C~~~~g~p~p~i~W~k-~g~~l 269 (527)
T 3qs9_E 223 TIDLNQTPQT--T--LPQLFLKVGEPLWIRCKAVHVNHGFGLTWEL-ENKAL 269 (527)
T ss_dssp EEESSSCCCC--S--CCEEEECTTSCEEEEEEEEESSSCCCEEEEC-SSSCC
T ss_pred EEEEeccCcc--C--CCceEEeCCCeEEEEEEEccCCCCeEEEEEE-CCEEC
Confidence 4555566654 2 5567888999999999997 89999999999 66554
No 254
>1iam_A ICAM-1, CD54, intercellular adhesion molecule-1; rhinovirus receptor, cell adhesion, integrin ligand, glycopr LFA-1 ligand, immunoglobulin fold; HET: NAG; 2.10A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ic1_A* 1d3l_A 1d3e_I 1d3i_I 3tcx_A
Probab=98.22 E-value=6.6e-06 Score=42.36 Aligned_cols=50 Identities=24% Similarity=0.458 Sum_probs=36.4
Q ss_pred eEEEEcCCEEeecCCCceEEecCCCeEEEEeeEee-ecCC--eEEEEeCCCcEEE
Q psy4606 3 YLDVVVPPDILNEESSSDIMAPEGGTIKLVCKAKG-YPRP--HITWKREDGQEII 54 (69)
Q Consensus 3 ~l~V~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~P~P--~~~W~~~~~~~~~ 54 (69)
.|.|+.+|...... +......+|..++|.|.+.| .|.+ .++|++ +++.+.
T Consensus 79 ~l~V~~~P~~v~i~-~~~~~~~~G~~~tL~C~v~g~~P~~~l~i~w~k-g~~~l~ 131 (185)
T 1iam_A 79 FLTVYWTPERVELA-PLPSWQPVGKQLTLRCQVEGGAPRAQLTVVLLR-GEKELK 131 (185)
T ss_dssp EEEEEBCCSEEEEC-CCCSEECTTSEEEEEEEEECCBCGGGEEEEEEE-TTEEEE
T ss_pred EEEEeCCCCCCEEc-cCCccccCCCcEEEEEEcCCccCCCCcEEEEEe-CCEEcc
Confidence 56777777544431 33345789999999999999 7775 489999 777664
No 255
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.22 E-value=1.4e-06 Score=47.07 Aligned_cols=45 Identities=27% Similarity=0.491 Sum_probs=33.4
Q ss_pred eEEEEcC----CEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeC
Q psy4606 3 YLDVVVP----PDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKRE 48 (69)
Q Consensus 3 ~l~V~~~----p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~ 48 (69)
.|.|... |.+... .+....+..|+.+.|.|.+.|.|.|.+.|++.
T Consensus 211 ~l~V~~~~~~~p~~~~~-~~~~~~~~~G~~v~l~C~~~g~p~p~v~W~~~ 259 (334)
T 1ry7_B 211 TLDVLERSPHRPILQAG-LPANQTAVLGSDVEFHCKVYSDAQPHIQWLKH 259 (334)
T ss_dssp EEEEECCCCSSCBCCTT-CSCCEEEESSCCEEECCCCBCSSCEEEEEEEC
T ss_pred EEEEecCCCCCCceEec-CCCceEEeCCCCEEEEEEEecCCCCeEEEEEC
Confidence 4666642 333321 24566788999999999999999999999983
No 256
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=98.22 E-value=3.8e-06 Score=43.63 Aligned_cols=47 Identities=19% Similarity=0.311 Sum_probs=34.4
Q ss_pred eEEEEc---CCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEE
Q psy4606 3 YLDVVV---PPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEI 53 (69)
Q Consensus 3 ~l~V~~---~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~ 53 (69)
.|.|.. +|.+... + ...+.+|+.++|.|.+.+.|.|.+.|+| +|..+
T Consensus 97 ~l~V~~~~~~P~i~~~--p-~~~v~~G~~v~L~C~~~~~~~~~~~W~k-~g~~~ 146 (218)
T 1uct_A 97 ELVVTGLYGKPFLSAD--R-GLVLMPGENISLTCSSAHIPFDRFSLAK-EGELS 146 (218)
T ss_dssp EEEEECSSCCCEEEES--S-CSEECTTCCCEEEEECSSSCCSEEEEEE-TTCSS
T ss_pred EEEEcCcccCCEEEeC--C-CCccCCCCCEEEEEeCCCCCCCEEEEEE-CCCcc
Confidence 456654 5666544 3 3467899999999977788889999999 66543
No 257
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=98.22 E-value=6.2e-06 Score=43.03 Aligned_cols=50 Identities=22% Similarity=0.250 Sum_probs=37.9
Q ss_pred eeEEEEcCCEEeecCCCceEEecCCCeEEEEeeE-eeecCCeEEEEeCCCcEEEe
Q psy4606 2 GYLDVVVPPDILNEESSSDIMAPEGGTIKLVCKA-KGYPRPHITWKREDGQEIII 55 (69)
Q Consensus 2 ~~l~V~~~p~~~~~~~~~~~~~~~g~~~~l~C~~-~g~P~P~~~W~~~~~~~~~~ 55 (69)
..|.|..++.... +....+.+|+.+.|.|.+ .|.|.|.+.|++ ++..+..
T Consensus 76 ~~l~v~~~~~~~~---~~~~~~~~g~~v~l~C~~~~~~p~~~v~W~~-~g~~~~~ 126 (262)
T 3rjd_A 76 IQLEIHRGWLLLQ---VSSRVFTEGEPLALRCHAWKDKLVYNVLYYR-NGKAFKF 126 (262)
T ss_dssp EEEEEECSSEEEE---ESCSEEETTSCEEEEEEEGGGCCCEEEEEEE-TTEEEEE
T ss_pred EEEEEeccceEec---CCCeEEecCCeEEEEEEccCCCCCceEEEEE-CCccccc
Confidence 4577777665544 334567789999999999 679999999999 7776643
No 258
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=98.21 E-value=9.9e-07 Score=48.01 Aligned_cols=46 Identities=20% Similarity=0.281 Sum_probs=22.2
Q ss_pred CCEEeecCCCceEEecCCCeEEEEeeEe----eecCCeEEEEeCCCcEEEe
Q psy4606 9 PPDILNEESSSDIMAPEGGTIKLVCKAK----GYPRPHITWKREDGQEIII 55 (69)
Q Consensus 9 ~p~~~~~~~~~~~~~~~g~~~~l~C~~~----g~P~P~~~W~~~~~~~~~~ 55 (69)
+|.+..........+..|+.+.|.|.+. |.|.|.+.|++ ++..+..
T Consensus 224 ~p~i~~~~~~~~~~v~~G~~v~l~C~~~~~~~g~p~p~v~W~~-~g~~l~~ 273 (349)
T 4dep_C 224 PPVIHSPNDHVVYEKEPGEELLIPCTVYFSFLMDSRNEVWWTI-DGKKPDD 273 (349)
T ss_dssp SCEEC----------------CCCEEEEECCCTTCCCEEEEES-SCC----
T ss_pred CCeEecCCCceeEEEecCCcEEEEEEEEEccCCCCCCEEEEEE-CCEEccc
Confidence 6776554111112677899999999999 57999999999 7766544
No 259
>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF receptor, cancer, immune system-transfer complex; HET: NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X
Probab=98.21 E-value=5.7e-06 Score=39.08 Aligned_cols=33 Identities=21% Similarity=0.331 Sum_probs=25.7
Q ss_pred CceEEecCCCeEEEEeeEeeec--CCeEEEEeCCCc
Q psy4606 18 SSDIMAPEGGTIKLVCKAKGYP--RPHITWKREDGQ 51 (69)
Q Consensus 18 ~~~~~~~~g~~~~l~C~~~g~P--~P~~~W~~~~~~ 51 (69)
+..+.+.+|+.+.|.|.+.|.| .+.+.|++ ++.
T Consensus 15 ~~~v~v~~G~~v~L~C~~~g~p~~~~~i~W~~-~~~ 49 (122)
T 3s35_X 15 SHGIELSVGEKLVLNCTARTELNVGIDFNWEY-PSS 49 (122)
T ss_dssp CSCEEEEETCCEEEEEEEEECTTCCCEEEEEC-SCT
T ss_pred CCCEEEecCCeEEEEEEEEcCCCCcEEEEEEC-CCc
Confidence 3345677899999999999944 57899999 444
No 260
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=98.21 E-value=2.9e-06 Score=42.99 Aligned_cols=41 Identities=10% Similarity=0.251 Sum_probs=32.2
Q ss_pred cCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEE
Q psy4606 8 VPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEI 53 (69)
Q Consensus 8 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~ 53 (69)
.+|.+... +.. .+.+|+.+.|.|.+.| |.|.+.|+| ++..+
T Consensus 4 ~~P~i~~~--p~~-~v~~G~~v~L~C~~~~-~~~~~~w~k-~g~~~ 44 (196)
T 3p2t_A 4 PKPTLWAE--PGS-VISWGNSVTIWCQGTL-EAREYRLDK-EESPA 44 (196)
T ss_dssp CCCEEEEE--SCS-EEETTCCEEEEEECCT-TCCEEEEEE-TTSCS
T ss_pred CCCEEEcc--CCC-cCCCCCcEEEEeeCCC-CCCEEEEEE-CCCCC
Confidence 35777665 444 6778999999999999 889999999 66544
No 261
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=98.20 E-value=5.6e-06 Score=46.82 Aligned_cols=43 Identities=23% Similarity=0.514 Sum_probs=34.4
Q ss_pred CCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEE
Q psy4606 9 PPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEII 54 (69)
Q Consensus 9 ~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~ 54 (69)
+|.+... +....+.+|+.++|.|.+ +.|.|.+.|+++++..+.
T Consensus 341 ~P~i~~~--~~~~~v~~G~~v~L~C~~-~~p~p~i~W~~~~~~~~~ 383 (440)
T 3zyj_A 341 APVIVEP--PADLNVTEGMAAELKCRA-STSLTSVSWITPNGTVMT 383 (440)
T ss_dssp CCCEEEC--CCCEEECTTSCCEECCEE-SSTTSEEEEECTTSCEEE
T ss_pred CCccccc--ccceeeccCceEEEEeec-CCCCCceEEEeCCCceee
Confidence 5666655 667888999999999999 679999999996565554
No 262
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=98.20 E-value=2.7e-06 Score=44.29 Aligned_cols=50 Identities=30% Similarity=0.579 Sum_probs=34.0
Q ss_pred eEEEE------cCCEEeecCCCceEEecCCCeEEEEeeEee-ecCC-eEEEEeCCCcEEE
Q psy4606 3 YLDVV------VPPDILNEESSSDIMAPEGGTIKLVCKAKG-YPRP-HITWKREDGQEII 54 (69)
Q Consensus 3 ~l~V~------~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~P~P-~~~W~~~~~~~~~ 54 (69)
.|.|. .+|.+.... +....+..|..+.|.|.+.| .|.| .+.|++ +|+.+.
T Consensus 109 ~l~V~~~~~~~~~p~~~~~~-~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~-~g~~l~ 166 (240)
T 3q5y_A 109 RLTVLEDLRNVTPPKVSLFE-PSKAEIANKQKATLVCLARGFFPDHVELSWWV-NGKEVH 166 (240)
T ss_dssp EEEEESCGGGCBCCEEEEEC-CCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEE-TTEEEC
T ss_pred EEEEeccccCCCCCeeEEeC-CchhhcccCCceEEEEEEeeEECCCeEEEEEE-CCEECc
Confidence 45665 355554321 23333446889999999999 7777 789999 787764
No 263
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=98.19 E-value=1.1e-05 Score=42.15 Aligned_cols=49 Identities=20% Similarity=0.508 Sum_probs=29.7
Q ss_pred eEEEEc----CCEEeecCCCceEEecCC-CeEEEEeeEeee-cCC-eEEEEeCCCcEE
Q psy4606 3 YLDVVV----PPDILNEESSSDIMAPEG-GTIKLVCKAKGY-PRP-HITWKREDGQEI 53 (69)
Q Consensus 3 ~l~V~~----~p~~~~~~~~~~~~~~~g-~~~~l~C~~~g~-P~P-~~~W~~~~~~~~ 53 (69)
.|.|.. +|.+.... +. .....| +.+.|.|.+.|. |.| .+.|++.+|+.+
T Consensus 115 ~L~V~~~~~~~P~v~~~~-p~-~~~~~g~~~v~L~C~~~g~~P~p~~v~W~~~~g~~l 170 (232)
T 1dn0_B 115 LVTVSSGSASAPTLFPLV-SC-ENSPSDTSSVAVGCLAQDFLPDSITFSWKYKNNSDI 170 (232)
T ss_dssp EEEECSSCCBCCEEEEEE-CC-------CCSEEEEEEEEEEBSSCCEEEEEETTSCEE
T ss_pred EEEEccCCCCCCceEEec-cc-cccCCCCCcEEEEEEEEEEeCCCeEEEEEcCCCCce
Confidence 566764 35544321 11 123467 899999999994 888 999998556554
No 264
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=98.19 E-value=3e-06 Score=44.20 Aligned_cols=51 Identities=31% Similarity=0.595 Sum_probs=34.4
Q ss_pred eEEEE------cCCEEeecCCCceEEecCCCeEEEEeeEee-ecCC-eEEEEeCCCcEEEe
Q psy4606 3 YLDVV------VPPDILNEESSSDIMAPEGGTIKLVCKAKG-YPRP-HITWKREDGQEIII 55 (69)
Q Consensus 3 ~l~V~------~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~P~P-~~~W~~~~~~~~~~ 55 (69)
.|.|. .+|.+.... +....+..|..+.|.|.+.| .|.| .+.|++ +|+.+..
T Consensus 111 ~l~V~~~~~~~~~p~~~~~~-~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~~-~g~~l~~ 169 (245)
T 4ei6_B 111 RLTVLEDLKNVFPPEVAVFE-PSEAEISHTQKATLVCLATGFYPDHVELSWWV-NGKEVHS 169 (245)
T ss_dssp EEEEESCGGGCBCCEEEEEC-CCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEE-TTEEECT
T ss_pred EEEEecccCCCCCceEEEeC-CCcccccCCCceEEEEEEeeEeCCCeEEEEEE-CCEECCC
Confidence 46666 356554321 33233456899999999999 5666 899999 7877653
No 265
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=98.19 E-value=9.3e-06 Score=41.35 Aligned_cols=46 Identities=13% Similarity=0.304 Sum_probs=33.6
Q ss_pred eEEEEc---CCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEE
Q psy4606 3 YLDVVV---PPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEI 53 (69)
Q Consensus 3 ~l~V~~---~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~ 53 (69)
.|.|.. +|.+... +. ..+.+|+.++|.|.+.+ |.|.+.|+| +|..+
T Consensus 99 ~l~V~~~~~~p~i~~~--p~-~~v~~G~~v~L~C~~~~-~~~~~~w~k-~g~~~ 147 (201)
T 1nkr_A 99 DIVIIGLYEKPSLSAQ--PG-PTVLAGENVTLSCSSRS-SYDMYHLSR-EGEAH 147 (201)
T ss_dssp EEEEECSSCCCEEEEE--SC-SEECTTCEEEEEEEESS-CCSEEEEEE-TTCSS
T ss_pred EEEeeccCCCCceecC--CC-CccCCCCeEEEEEeCCC-CCceEEEEE-CCccc
Confidence 566764 4666554 32 35789999999999987 678999999 66543
No 266
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=98.18 E-value=1.3e-06 Score=49.14 Aligned_cols=44 Identities=16% Similarity=0.370 Sum_probs=29.4
Q ss_pred EcCCEEeecCCCceEEecCCCeEEEEeeEee-ecCC-eEEEEeCCCcEE
Q psy4606 7 VVPPDILNEESSSDIMAPEGGTIKLVCKAKG-YPRP-HITWKREDGQEI 53 (69)
Q Consensus 7 ~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~P~P-~~~W~~~~~~~~ 53 (69)
..+|.+...+... ..+ .++.+.|.|.+.| .|.| .++|++ +|..+
T Consensus 344 ~~~P~v~~~~~~~-~~~-~~~~~~L~C~~~g~~P~~~~v~W~k-~g~~l 389 (444)
T 1igt_B 344 VRAPQVYVLPPPE-EEM-TKKQVTLTCMVTDFMPEDIYVEWTN-NGKTE 389 (444)
T ss_dssp CBCCEEEEECCCG-GGT-TSSEEEEEEEEEEEBSSCCEEEEEE-TTEEC
T ss_pred CCCCEEEEeCCCh-HHc-cCCeEEEEEEEEeeeCCCCEEEEEE-CCEEc
Confidence 4677765442121 112 3456999999999 6777 899999 77665
No 267
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=98.18 E-value=5.4e-07 Score=46.38 Aligned_cols=42 Identities=26% Similarity=0.549 Sum_probs=30.5
Q ss_pred eEEEEcCCEEeecCCCceEEecCCCeE-EEEeeEe-eecCCeEEEEe
Q psy4606 3 YLDVVVPPDILNEESSSDIMAPEGGTI-KLVCKAK-GYPRPHITWKR 47 (69)
Q Consensus 3 ~l~V~~~p~~~~~~~~~~~~~~~g~~~-~l~C~~~-g~P~P~~~W~~ 47 (69)
.|.|.++|.+... ..... ..|+.+ .|.|.+. |.|.|.++|++
T Consensus 110 ~L~V~~~P~~~~~--~~~~~-~~g~~~~~l~C~~~~g~P~p~v~W~k 153 (221)
T 3eow_R 110 WLRVLAKPQNTAE--VQKVQ-LTGEPVPMARCVSTGGRPPAQITWHS 153 (221)
T ss_dssp CCCCCCCCEEEEE--EECCC-CCSSSCCEEEEEEESCSSCCCEEEEC
T ss_pred EEEEEECCCceee--cCCcc-cCCceEEEEEEECCCccCCCeeEEEe
Confidence 4566778877643 22222 567788 5999998 79999999998
No 268
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=98.18 E-value=6.8e-06 Score=43.21 Aligned_cols=36 Identities=11% Similarity=0.323 Sum_probs=29.9
Q ss_pred CEEeecCCCceEEecCCCeEEEEeeEeeecC-CeEEEEe
Q psy4606 10 PDILNEESSSDIMAPEGGTIKLVCKAKGYPR-PHITWKR 47 (69)
Q Consensus 10 p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~-P~~~W~~ 47 (69)
|.+... +....+.+|+.++|.|.+.|.|. |.+.|++
T Consensus 150 ~~~~~~--~~~~~v~~G~~v~L~C~~~~~~~~~~v~W~k 186 (256)
T 3juy_B 150 IVLTQA--PGTLSLSPGERATFSCRSSHSIRSRRVAWYQ 186 (256)
T ss_dssp CCEEEE--CSEEEECTTSCEEEEEEESSCCTTCCEEEEE
T ss_pred eEEEec--CCeEEEeCCCCEEEEEEECCCcCCeeEEEEE
Confidence 445555 66778899999999999999876 9999997
No 269
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=98.17 E-value=4.8e-07 Score=50.78 Aligned_cols=44 Identities=18% Similarity=0.452 Sum_probs=29.1
Q ss_pred EcCCEEeecCCCceEEecCCCeEEEEeeEeee-cCC-eEEEEeCCCcEE
Q psy4606 7 VVPPDILNEESSSDIMAPEGGTIKLVCKAKGY-PRP-HITWKREDGQEI 53 (69)
Q Consensus 7 ~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~-P~P-~~~W~~~~~~~~ 53 (69)
..+|.+...+... ....|+.+.|.|.+.|. |.+ .++|++ +|+.+
T Consensus 334 ~~~P~v~~~~~~~--~~~~~~~~~L~C~~~g~~P~~~~v~W~k-~g~~l 379 (434)
T 1igy_B 334 PRAPQVYTIPPPK--EQMAKDKVSLTCMITDFFPEDITVEWQS-DGQAP 379 (434)
T ss_dssp CBCCCCEEECCCS--SSSSSSEEEEEEEEEEEBCSCEEEEEEE-TTSCC
T ss_pred CcCCEEEEECCCH--HHhcCCcEEEEEEEEeeECCCeEEEEEE-CCEec
Confidence 3567665432121 12357789999999995 443 899999 77665
No 270
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=98.17 E-value=9.3e-06 Score=46.92 Aligned_cols=44 Identities=16% Similarity=0.240 Sum_probs=37.4
Q ss_pred eeEEEEcCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeE----EEEe
Q psy4606 2 GYLDVVVPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHI----TWKR 47 (69)
Q Consensus 2 ~~l~V~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~----~W~~ 47 (69)
..|.|..+|.+... +....+.+|+.+.|.|.+.|.|.|.+ .|++
T Consensus 324 ~~l~V~~~p~~~~~--~~~~~~~~G~~v~l~C~~~~~p~p~i~~w~~W~~ 371 (585)
T 2ocw_A 324 WQLFVNEESTIPRS--PTVVKGVAGSSVAVLCPYNRKESKSIKYWCLWEG 371 (585)
T ss_pred EEEEEecccccccC--CcceEEEeCCcEEEEEecCCCCCccEEEEEEEEc
Confidence 45788888888765 66677889999999999999999987 7988
No 271
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=98.16 E-value=2.7e-06 Score=47.48 Aligned_cols=50 Identities=26% Similarity=0.436 Sum_probs=34.1
Q ss_pred eEEEEc---CCEEeecCCCceEEecCCCeEEEEeeEee-ecCC-eEEEEeCCCcEEEe
Q psy4606 3 YLDVVV---PPDILNEESSSDIMAPEGGTIKLVCKAKG-YPRP-HITWKREDGQEIII 55 (69)
Q Consensus 3 ~l~V~~---~p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~P~P-~~~W~~~~~~~~~~ 55 (69)
.|.|.. +|.+... .......+|+.+.|.|.+.| .|.| .+.|++ +|..+..
T Consensus 107 ~l~V~~~~~~P~v~~~--~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k-~g~~~~~ 161 (438)
T 1qgc_4 107 KLDLKRADAAPTVSIF--PPSSEQLTSGGASVVCFLNNFYPKDINVKWKI-DGSERQN 161 (438)
T ss_dssp EEEECCCCBCCEEEEE--CCCHHHHHTTEEEEEEEEEEEBSSCEEEEEEE-TTEEECT
T ss_pred eEEecCCCCCCEEEec--CCChhhccCCceEEEEEEccccCCCcEEEEEE-CCEEcCC
Confidence 566652 6665543 11112235789999999998 7888 999999 7877643
No 272
>3c5j_A HLA class II histocompatibility antigen, DR alpha; HLA, MHC class II, glycoprotein, immune response, membrane, transmembrane, GTP-binding, methylation; HET: NAG; 1.80A {Homo sapiens} PDB: 1d5x_A* 1d5z_A* 1d6e_A* 1d5m_A 1fyt_A* 1hqr_A 1j8h_A* 1r5i_A 1seb_A 1zgl_A 2seb_A* 1fv1_A* 2ipk_A* 3pdo_A 3pgc_A 3pgd_A 1ymm_A* 1aqd_A 2g9h_A* 1h15_A ...
Probab=98.16 E-value=1.9e-06 Score=44.04 Aligned_cols=45 Identities=22% Similarity=0.432 Sum_probs=31.1
Q ss_pred EEcCCEEeecCCCceEEecCCCeEEEEeeEee-ecCC-eEEEEeCCCcEEE
Q psy4606 6 VVVPPDILNEESSSDIMAPEGGTIKLVCKAKG-YPRP-HITWKREDGQEII 54 (69)
Q Consensus 6 V~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~P~P-~~~W~~~~~~~~~ 54 (69)
...+|.+...+ .. ....+..++|.|.+.| +|.+ .++|.+ +|+.+.
T Consensus 83 r~~~P~v~v~~--~~-~~~~~~~~~L~C~a~gFyP~~i~v~W~k-~g~~~~ 129 (181)
T 3c5j_A 83 TNVPPEVTVLT--NS-PVELREPNVLICFIDKFTPPVVNVTWLR-NGKPVT 129 (181)
T ss_dssp CCBCCEEEEEE--SS-CCCTTSCEEEEEEEEEEBSSCCEEEEEE-TTEEEC
T ss_pred cccCCceeccc--CC-hhhcCCCCeEEEEEeEEECCCCEEEEEE-CCEECC
Confidence 34677765431 11 1234677999999999 7765 799999 887764
No 273
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=98.15 E-value=2.1e-06 Score=46.92 Aligned_cols=47 Identities=23% Similarity=0.502 Sum_probs=32.4
Q ss_pred eEEEE----cCCEEeecCCCceEEecCCCeEEEEeeEeee-cC-CeEEEEeCCCcE
Q psy4606 3 YLDVV----VPPDILNEESSSDIMAPEGGTIKLVCKAKGY-PR-PHITWKREDGQE 52 (69)
Q Consensus 3 ~l~V~----~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~-P~-P~~~W~~~~~~~ 52 (69)
.|.|. .+|.+... .....+.+|+.+.|.|.+.|. |. |.+.|++ ++..
T Consensus 110 ~l~V~~~~~~~P~i~~~--~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k-~g~~ 162 (344)
T 1za6_B 110 LVTVSSASTKGPSVFPL--APSSKSTSGGTAALGCLVKDYFPEPVTVSWNS-GALT 162 (344)
T ss_dssp EEEECSSCCBCCEEEEE--CCSCTTTSSSEEEEEEEEEEEBSSCCCEEETT-TTBC
T ss_pred EEEEecCCCCCCeEEEc--cccccccCCCcEEEEEEEeeEECCCeEEEEec-CCcc
Confidence 56776 34555433 212234689999999999996 75 7999998 6654
No 274
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.14 E-value=8.7e-06 Score=41.10 Aligned_cols=46 Identities=13% Similarity=0.222 Sum_probs=32.9
Q ss_pred eEEEEc---CCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEE
Q psy4606 3 YLDVVV---PPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEI 53 (69)
Q Consensus 3 ~l~V~~---~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~ 53 (69)
.|.|.. +|.+... + ...+.+|+.+.|.|.+.+ +.|.+.|+| ++..+
T Consensus 90 ~l~V~~~~~~p~i~~~--p-~~~v~~G~~v~L~C~~~~-~~~~~~w~k-~g~~~ 138 (188)
T 1oll_A 90 DLVVTEMYDTPTLSVH--P-GPEVISGEKVTFYCRLDT-ATSMFLLLK-EGRSS 138 (188)
T ss_dssp EEEEESCSCCCEEEEE--S-CSEEETTCEEEEEEECSS-SCSEEEEEE-ESSSC
T ss_pred EEEecccCCCCeEEEC--C-CCccccCCEEEEEEEcCC-CCCEEEEEE-CCccc
Confidence 456653 5666554 3 245779999999999876 567999999 66544
No 275
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=98.14 E-value=5.8e-06 Score=42.58 Aligned_cols=29 Identities=31% Similarity=0.946 Sum_probs=24.5
Q ss_pred cCCCeEEEEeeEee-ecC-C-eEEEEeCCCcEE
Q psy4606 24 PEGGTIKLVCKAKG-YPR-P-HITWKREDGQEI 53 (69)
Q Consensus 24 ~~g~~~~l~C~~~g-~P~-P-~~~W~~~~~~~~ 53 (69)
..|..+.|.|.+.| .|. | .+.|++ +++.+
T Consensus 136 ~~g~~v~L~C~~~~~~P~~~~~v~W~~-~g~~~ 167 (221)
T 3m8o_H 136 QPDGNVVIACLVQGFFPQEPLSVTWSE-SGQGV 167 (221)
T ss_dssp CCTTEEEEEEEEEEEBSSCSEEEEESC-CSTTC
T ss_pred ccCCCEEEEEEEEeeECCCCEEEEEEE-CCEEC
Confidence 57999999999999 887 4 899998 66654
No 276
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.14 E-value=5.4e-06 Score=41.39 Aligned_cols=34 Identities=18% Similarity=0.313 Sum_probs=28.6
Q ss_pred EEecCCCeEEEEeeEeeecCC--eEEEEeCCCcEEEe
Q psy4606 21 IMAPEGGTIKLVCKAKGYPRP--HITWKREDGQEIII 55 (69)
Q Consensus 21 ~~~~~g~~~~l~C~~~g~P~P--~~~W~~~~~~~~~~ 55 (69)
..+.+|+.+.|.|.+.|.|.| .+.|++ ++..+..
T Consensus 8 ~~v~~G~~v~l~C~~~~~~~p~~~~~W~k-~~~~l~~ 43 (184)
T 3b5h_A 8 TVEDLGSKILLTCSLNDSATEVTGHRWLK-GGVVLKE 43 (184)
T ss_dssp EEEEETTEEEEEEEEESCSSCCCEEEEES-SSEEEEC
T ss_pred EEEecCCCEEEEEECCCCCCCceEEEEEe-CCEEeec
Confidence 356789999999999998888 999999 7777654
No 277
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=98.14 E-value=4.4e-06 Score=45.45 Aligned_cols=52 Identities=23% Similarity=0.280 Sum_probs=36.5
Q ss_pred eeEEEEcCCEEeecC--CCceEEecCCCeEEEEeeE-----eeecCCeEEEEeCCCcEEE
Q psy4606 2 GYLDVVVPPDILNEE--SSSDIMAPEGGTIKLVCKA-----KGYPRPHITWKREDGQEII 54 (69)
Q Consensus 2 ~~l~V~~~p~~~~~~--~~~~~~~~~g~~~~l~C~~-----~g~P~P~~~W~~~~~~~~~ 54 (69)
..|.|..+|...... .+....+..|+.+.|.|.+ .|.|.|.+.|++ ++..+.
T Consensus 109 ~~l~V~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~g~p~~~v~W~k-~~~~l~ 167 (349)
T 4dep_C 109 FPLEVVQKDSCFNSPMKLPVHKLYIEYGIQRITCPNVDGYFPSSVKPTITWYM-GCYKIQ 167 (349)
T ss_dssp EEEEEECCCTTSCCSCCCCEEEEETTCSEEEEECCSCTTSSCTTSCCEEEEEE-TTEECC
T ss_pred EEEEEecCCcccCcccccCcceeeecCccEEEEcCCCcccccCCCCceEEEee-CCEECC
Confidence 346777655422210 1335567889999999986 789999999999 777654
No 278
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=98.14 E-value=5.9e-07 Score=46.70 Aligned_cols=42 Identities=21% Similarity=0.173 Sum_probs=32.6
Q ss_pred EcCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEE
Q psy4606 7 VVPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEI 53 (69)
Q Consensus 7 ~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~ 53 (69)
..+|.+... +. ..+.+|+.++|.|.+.| |.|.+.|+| +|..+
T Consensus 7 ~~~P~i~~~--p~-~~v~~G~~vtL~C~~~~-~~~~~~W~k-~g~~~ 48 (218)
T 1uct_A 7 FPMPFISAK--SS-PVIPLDGSVKIQCQAIR-EAYLTQLMI-IKNST 48 (218)
T ss_dssp SCCCCEEES--SC-SEEETTCCEEEEECCCT-TCSEEEEEE-EETTE
T ss_pred CCCCEEEec--CC-CccCCCCCEEEEEEcCC-CCCEEEEEE-CCCcc
Confidence 356777765 33 36788999999999988 789999999 66554
No 279
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=98.13 E-value=6.9e-06 Score=43.48 Aligned_cols=51 Identities=20% Similarity=0.229 Sum_probs=37.4
Q ss_pred eeEEEEcCCE-EeecCCCceEEecCCCeEEEEeeEeeecCCe-EEEEeCCCcEEE
Q psy4606 2 GYLDVVVPPD-ILNEESSSDIMAPEGGTIKLVCKAKGYPRPH-ITWKREDGQEII 54 (69)
Q Consensus 2 ~~l~V~~~p~-~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~-~~W~~~~~~~~~ 54 (69)
..|.|..+|. +... +....+.+|+.+.|.|.+.|.|.+. +.|++.++..+.
T Consensus 81 ~~l~V~~~~~~~~~~--~~~~~v~~g~~v~L~C~~~~~~~~~~v~W~~~~~~~~~ 133 (289)
T 3ejj_X 81 IHLYVKDPAHSWNLL--AQEVTVVEGQEAVLPCLITDPALKDSVSLMREGGRQVL 133 (289)
T ss_dssp EEEEECCSSCSEEES--CSEEEEETTSCEEECEEESCGGGGGSEEEEEGGGEECC
T ss_pred EEEEEeCCCcceecc--cceEEEecCCceEeEEEccCCCcceEEEEEecCCeecC
Confidence 3566776665 3444 5667888999999999999977765 999864555543
No 280
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=98.12 E-value=5.4e-06 Score=42.28 Aligned_cols=31 Identities=23% Similarity=0.604 Sum_probs=27.8
Q ss_pred CceEEecCCCeEEEEeeEeeecCCeEEEEeC
Q psy4606 18 SSDIMAPEGGTIKLVCKAKGYPRPHITWKRE 48 (69)
Q Consensus 18 ~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~ 48 (69)
+..+.+.+|+.+.|.|.+.|.|.|.+.|++.
T Consensus 8 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~ 38 (213)
T 3nl4_L 8 PASVSEPVGGTVTIKCQASQSISSYLAWYQQ 38 (213)
T ss_dssp CSEEEEETTCCEEEEEEESSCCTTCEEEEEE
T ss_pred CCeEEEcCCCCEEEEEEecCCCCceEEEEEE
Confidence 5567888999999999999999999999983
No 281
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=98.12 E-value=1.1e-05 Score=43.34 Aligned_cols=48 Identities=23% Similarity=0.394 Sum_probs=35.2
Q ss_pred eEEEEcCCEEeecCCCceEEecCCCeEEEEeeEe-eecCCeEEEEeCCCcEE
Q psy4606 3 YLDVVVPPDILNEESSSDIMAPEGGTIKLVCKAK-GYPRPHITWKREDGQEI 53 (69)
Q Consensus 3 ~l~V~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~-g~P~P~~~W~~~~~~~~ 53 (69)
.|.|..+|.+... ........+..+.+.|.+. |.|.|.+.|++ ++..+
T Consensus 111 ~l~v~~~P~~~~~--~~~~~~~~~~~~~~~C~~~~~~P~~~i~W~~-~~~~~ 159 (313)
T 4fqp_A 111 WLRVLAKPQNTAE--VQKVQLTGEPVPMARCVSTGGRPPAQITWHS-DLGGM 159 (313)
T ss_dssp EECCBBCCEEEEE--ECCBCCCSSCEEEEEEEEEEEBSCCEEEEEE-TTCCE
T ss_pred eeeeccCCcceec--ccceEeecCceEEEEEEccCccCCcEEEeec-CCccc
Confidence 4556677876654 4445566788899999886 69999999999 55544
No 282
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=98.12 E-value=2.3e-06 Score=46.77 Aligned_cols=44 Identities=23% Similarity=0.462 Sum_probs=28.6
Q ss_pred cCCEEeecCCCceEEecCCCeEEEEeeEeee-c-CCeEEEEeCCCcEEE
Q psy4606 8 VPPDILNEESSSDIMAPEGGTIKLVCKAKGY-P-RPHITWKREDGQEII 54 (69)
Q Consensus 8 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~-P-~P~~~W~~~~~~~~~ 54 (69)
.+|.+...+ +... ...|+.+.|.|.+.|. | .+.+.|++ +|..+.
T Consensus 241 ~~P~v~~~~-~~~~-~~~~~~~~L~C~~~g~~P~~~~v~W~k-~g~~~~ 286 (344)
T 1za6_B 241 REPQVYTLP-PSRD-ELTKNQVSLTCLVKGFYPSDIAVEWES-NGQPEN 286 (344)
T ss_dssp BCCEEEEEC-CCGG-GGGSSSEEEEEEEEEEBSSCCEEEEES-SSSCCC
T ss_pred cCCEEEEeC-CChH-hccCCcEEEEEEEeeEECCCeEEEEEE-CCeECC
Confidence 566655432 1111 2346679999999995 4 36899999 776653
No 283
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=98.12 E-value=7.3e-06 Score=43.08 Aligned_cols=36 Identities=19% Similarity=0.396 Sum_probs=29.8
Q ss_pred CEEeecCCCceEEecCCCeEEEEeeEeeecCC-eEEEEe
Q psy4606 10 PDILNEESSSDIMAPEGGTIKLVCKAKGYPRP-HITWKR 47 (69)
Q Consensus 10 p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P-~~~W~~ 47 (69)
+.+... +....+.+|+.++|.|.+.+.|.| .+.|++
T Consensus 142 ~~~~~~--p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~k 178 (257)
T 3gkz_A 142 IVLTQS--PAIMSASPGEKVTLTCSASSSVSSSHLYWYQ 178 (257)
T ss_dssp CCEECS--CSEEEECTTCCEEEEEEESSCCCGGGEEEEE
T ss_pred eEEEcC--CceEEEeCCCcEEEEEEEccCccceEEEEEE
Confidence 445444 566788999999999999998888 999998
No 284
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=98.12 E-value=3e-06 Score=43.84 Aligned_cols=44 Identities=16% Similarity=0.118 Sum_probs=30.4
Q ss_pred cCCEEeecCCCceEE-ecCCCeEEEEeeEeee---cC-CeEEEEeCCCcEE
Q psy4606 8 VPPDILNEESSSDIM-APEGGTIKLVCKAKGY---PR-PHITWKREDGQEI 53 (69)
Q Consensus 8 ~~p~~~~~~~~~~~~-~~~g~~~~l~C~~~g~---P~-P~~~W~~~~~~~~ 53 (69)
.+|.+...+ +.... +.+|+.+.|.|.+.|. |. |.+.|++ ++..+
T Consensus 8 ~~p~v~~~p-p~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k-~~~~~ 56 (218)
T 2rgs_A 8 GGPSVFIFP-PNIKDVLMISLTPKVTCVVVDVSEDDPDVQISWFV-NNVEV 56 (218)
T ss_dssp -CCEEEEEC-CCHHHHHCTTSCCEEEEEEEEECTTSCCEEEEEEE-TTEEE
T ss_pred CCCEEEEEC-cCHHHhhccCCCeeEEEEEcCCccCCCceEEEEEE-CCccc
Confidence 456665542 22222 6789999999999997 44 7999999 66554
No 285
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=98.12 E-value=6.3e-06 Score=42.82 Aligned_cols=47 Identities=26% Similarity=0.574 Sum_probs=28.3
Q ss_pred eEEEEc----CCEEeecCCCceEEecCCCeEEEEeeEeee-cCC-eEEEEeCCCcE
Q psy4606 3 YLDVVV----PPDILNEESSSDIMAPEGGTIKLVCKAKGY-PRP-HITWKREDGQE 52 (69)
Q Consensus 3 ~l~V~~----~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~-P~P-~~~W~~~~~~~ 52 (69)
.|.|.. +|.+.... +. ..+..|+.+.|.|.+.|. |.| .+.|++ ++..
T Consensus 111 ~L~V~~~~~~~P~v~~~~-~~-~~~~~g~~v~L~C~~~g~~P~p~~v~W~~-~g~~ 163 (227)
T 1mju_H 111 LVTVSAAKTTAPSVYPLA-PV-CGDTSGSSVTLGCLVKGYFPEPVTLTWNS-GSLS 163 (227)
T ss_dssp EEEECSSCCBCCEEEEEC-CC-C------CEEEEEEEEEEBSSCCEEEEGG-GTBC
T ss_pred EEEEcCCCCCCCEEEEec-CC-ccccCCCcEEEEEEeecEeCCCeEEEEec-CCCc
Confidence 566764 45554331 22 234579999999999994 888 999998 5544
No 286
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=98.12 E-value=2.1e-06 Score=47.90 Aligned_cols=48 Identities=27% Similarity=0.586 Sum_probs=33.7
Q ss_pred eEEEE----cCCEEeecCCCceEEecCCCeEEEEeeEeee-cCC-eEEEEeCCCcEE
Q psy4606 3 YLDVV----VPPDILNEESSSDIMAPEGGTIKLVCKAKGY-PRP-HITWKREDGQEI 53 (69)
Q Consensus 3 ~l~V~----~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~-P~P-~~~W~~~~~~~~ 53 (69)
.|.|. .+|.+... .....+..|+.+.|.|.+.|. |.| .+.|++ ++..+
T Consensus 333 ~l~V~~~~~~~P~v~~~--~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~-~g~~~ 386 (438)
T 1qgc_4 333 VVTVSAAKTTPPSVYPL--APGSAAAAASMVTLGCLVKGYFPEPVTVTWNS-GSLSS 386 (438)
T ss_dssp EEEECSSCCBCCEEEEE--CCCGGGCCSSEEEEEEEEESCBSSCCEEEEGG-GTCCS
T ss_pred EEEEecCCCCCCeEEEc--CcccccccCCcEEEEEEeccccCCCcEEEEec-CCCCC
Confidence 56665 35655443 212235679999999999996 999 999998 66554
No 287
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=98.11 E-value=2.9e-06 Score=44.77 Aligned_cols=30 Identities=23% Similarity=0.424 Sum_probs=26.6
Q ss_pred CceEEecCCCeEEEEeeEeeecCCeEEEEe
Q psy4606 18 SSDIMAPEGGTIKLVCKAKGYPRPHITWKR 47 (69)
Q Consensus 18 ~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~ 47 (69)
+..+.+.+|+.+.|.|.+.|.|.|.+.|++
T Consensus 146 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k 175 (257)
T 1f3r_B 146 PSLLSASVGDRVTLSCKGSQNINNYLAWYQ 175 (257)
T ss_dssp TSEECCCTTCCEEEEEECSSCCBTCEEEEE
T ss_pred CCEEEEcCCCCEEEEEEECCcCCCcEEEEE
Confidence 445668899999999999999989999998
No 288
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=98.11 E-value=1.7e-06 Score=44.46 Aligned_cols=46 Identities=22% Similarity=0.379 Sum_probs=28.3
Q ss_pred eEEEE----cCCEEeecCCCceEEecCCCeEEEEeeEeeecC--CeEEEEeCCCc
Q psy4606 3 YLDVV----VPPDILNEESSSDIMAPEGGTIKLVCKAKGYPR--PHITWKREDGQ 51 (69)
Q Consensus 3 ~l~V~----~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~--P~~~W~~~~~~ 51 (69)
.|.|. .+|.+... .....+..|+.+.|.|.+.|.|. ..+.|++ ++.
T Consensus 110 ~l~V~~~~~~~P~i~~~--~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~~-~g~ 161 (215)
T 3nl4_H 110 LVTVSSGQPKAPSVFPL--APCCGDTPSSTVTLGCLVKGYLPEPVTVTWNS-GTL 161 (215)
T ss_dssp EEEECSSCCBCCEEEEE--CCCTTCCC--CEEEEEEEEEEBSSCCEEEEGG-GTB
T ss_pred EEEEeCCCcCCCEEEEe--cCCccccCCCcEEEEEEEeeeeCCCeEEEEee-CCE
Confidence 46665 45666533 11223456999999999999643 3577998 665
No 289
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=98.11 E-value=1e-05 Score=41.51 Aligned_cols=28 Identities=25% Similarity=0.751 Sum_probs=24.7
Q ss_pred EEecCCCeEEEEeeEeeecCCeEEEEeC
Q psy4606 21 IMAPEGGTIKLVCKAKGYPRPHITWKRE 48 (69)
Q Consensus 21 ~~~~~g~~~~l~C~~~g~P~P~~~W~~~ 48 (69)
..+.+|+.+.|.|.+.|.|.|.+.|++.
T Consensus 11 ~~~~~G~~v~L~C~~~g~P~p~i~W~~~ 38 (202)
T 1vca_A 11 YLAQIGDSVSLTCSTTGCESPFFSWRTQ 38 (202)
T ss_dssp EEEETTSCEEEEEEEESCSSCEEEEEET
T ss_pred EEEcCCCcEEEEEeecCCCCCeEEEECC
Confidence 4455899999999999999999999983
No 290
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=98.11 E-value=3.7e-06 Score=47.50 Aligned_cols=46 Identities=24% Similarity=0.477 Sum_probs=32.4
Q ss_pred eEEEEc----CCEEeecCCCceEEecCCCeEEEEeeEeee-cC-CeEEEEeCCCc
Q psy4606 3 YLDVVV----PPDILNEESSSDIMAPEGGTIKLVCKAKGY-PR-PHITWKREDGQ 51 (69)
Q Consensus 3 ~l~V~~----~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~-P~-P~~~W~~~~~~ 51 (69)
.|.|.. +|.+... .....+.+|+.+.|.|.+.|. |. |.+.|++ ++.
T Consensus 122 ~l~V~~~~~~~P~i~~~--~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k-~~~ 173 (457)
T 1hzh_H 122 TVIVSSASTKGPSVFPL--APSSKSTSGGTAALGCLVKDYFPEPVTVSWNS-GAL 173 (457)
T ss_dssp EEEECSCCCBCCEEEEE--CCCSCCCTTCCEEEEEEEESBBSCCCEEEETT-TTB
T ss_pred EEEecCCCCCCCeEEec--CccccccCCCcEEEEEEEeEEeCCCeEEEEEe-CCE
Confidence 566664 5655443 222235689999999999995 76 8999998 564
No 291
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=98.11 E-value=3.8e-06 Score=44.54 Aligned_cols=50 Identities=18% Similarity=0.187 Sum_probs=36.2
Q ss_pred eeEEEEcCCEE-eecCCCceEEecCCCeEEEEeeEeeecC--CeEEEEeCCCcEEE
Q psy4606 2 GYLDVVVPPDI-LNEESSSDIMAPEGGTIKLVCKAKGYPR--PHITWKREDGQEII 54 (69)
Q Consensus 2 ~~l~V~~~p~~-~~~~~~~~~~~~~g~~~~l~C~~~g~P~--P~~~W~~~~~~~~~ 54 (69)
.+|.|..+|.. ... +....+.+|+.+.|.|.+.| |. |.+.|++.++..+.
T Consensus 81 ~~l~V~~~~~~~~~~--~~~~~v~~g~~v~l~C~~~~-~~~~~~v~W~~~~~~~~~ 133 (292)
T 4dkd_C 81 IHLYVKDPARPWNVL--AQEVVVFEDQDALLPCLLTD-PVLEAGVSLVRVRGRPLM 133 (292)
T ss_dssp ECCEECCSSCCEEES--CSEEEEETTSCEECCEEESS-GGGGSSEEEEEGGGCCCC
T ss_pred EEEEEcCcccccccc--CCeEEEcCCCcEEEeeeCCC-CCcceeEEEEecCCCccc
Confidence 35667776653 333 55677889999999999998 54 88999984455543
No 292
>1xau_A B- and T-lymphocyte attenuator; IG domain, beta sandwich, structural genomics, PSI, protein structure initiative; 1.80A {Mus musculus} SCOP: b.1.1.4
Probab=98.10 E-value=1.1e-05 Score=38.63 Aligned_cols=35 Identities=31% Similarity=0.521 Sum_probs=29.2
Q ss_pred CceEEecCCCeEEEEeeEee-ecCCeEEEEeCCCcE
Q psy4606 18 SSDIMAPEGGTIKLVCKAKG-YPRPHITWKREDGQE 52 (69)
Q Consensus 18 ~~~~~~~~g~~~~l~C~~~g-~P~P~~~W~~~~~~~ 52 (69)
.....+..|+.+.|.|.+.+ .|.|.++|.|.+++.
T Consensus 21 ~S~~tv~~G~~~~LeCpv~yc~~rPnVtWcK~~~~~ 56 (122)
T 1xau_A 21 NSKHSAWTGELFKIECPVKYCVHRPNVTWCKHNGTI 56 (122)
T ss_dssp TEEEEECTTSCEEEEEEEECSSSCCCEEEEEECSSS
T ss_pred eccEEEecCCeEEEEeEecCCCCCCcEEEEecCCee
Confidence 55667889999999999977 789999999965543
No 293
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=98.10 E-value=5.2e-06 Score=42.31 Aligned_cols=43 Identities=26% Similarity=0.466 Sum_probs=29.9
Q ss_pred eEEEEc---CCEEeecCCCceEEecCCCeEEEEeeEeee----cCCeEEEEeCCCc
Q psy4606 3 YLDVVV---PPDILNEESSSDIMAPEGGTIKLVCKAKGY----PRPHITWKREDGQ 51 (69)
Q Consensus 3 ~l~V~~---~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~----P~P~~~W~~~~~~ 51 (69)
.|.|.. +|.+.. +. .+.+|..+.|.|.+.|. |.|.+.|++ ++.
T Consensus 117 ~l~V~~~~~~p~i~~---~~--~~~~G~~v~L~C~~~~~~~~~p~p~v~W~~-~~~ 166 (214)
T 2zg1_A 117 NLEVTALIEKPDIHF---LE--PLESGRPTRLSCSLPGSCEAGPPLTFSWTG-NAL 166 (214)
T ss_dssp EEEEECCCCCCEEC-----C--CCCTTCCEEEEEECTTCCSCSSCCEEEEES-STT
T ss_pred EEEEecCCCCCceec---Cc--cccCCCeEEEEEEeccCCCCCCCceEEEeC-CCC
Confidence 466665 344432 22 25689999999999874 899999999 443
No 294
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=98.10 E-value=2.6e-06 Score=46.71 Aligned_cols=40 Identities=15% Similarity=0.301 Sum_probs=33.7
Q ss_pred cCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCC
Q psy4606 8 VPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKRED 49 (69)
Q Consensus 8 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~ 49 (69)
.+|.+... +....+.+|+.+.|.|.+.|.|.|.+.|++++
T Consensus 157 ~~P~i~~~--~~~~~v~~G~~v~L~C~~~g~p~p~i~W~~~~ 196 (347)
T 2ifg_A 157 GVPTLKVQ--VPNASVDVGDDVLLRCQVEGRGLEQAGWILTE 196 (347)
T ss_dssp CCCEEEEE--CCSSCCBTTCCEEEEEEEECSSCCCCCEEESC
T ss_pred CCCceecc--CCceEEeCCCcEEEEEEEecCCCCEEEEEcCC
Confidence 46777766 55667889999999999999999999999943
No 295
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=98.09 E-value=4.5e-06 Score=43.93 Aligned_cols=29 Identities=34% Similarity=0.756 Sum_probs=24.8
Q ss_pred CCCeEEEEeeEee-ecCC-eEEEEeCCCcEEE
Q psy4606 25 EGGTIKLVCKAKG-YPRP-HITWKREDGQEII 54 (69)
Q Consensus 25 ~g~~~~l~C~~~g-~P~P-~~~W~~~~~~~~~ 54 (69)
.|..+.|.|.+.| .|.| .++|++ +|..+.
T Consensus 138 ~g~~~~L~C~~~g~~P~~i~v~W~k-~g~~l~ 168 (253)
T 3to4_D 138 HTQKATLVCLATGFYPDHVELSWWV-NGKEVH 168 (253)
T ss_dssp HHSEEEEEEEEEEEBSSCEEEEEEE-TTEEEC
T ss_pred cCCceEEEEEEceEECCcEEEEEEE-CCEECC
Confidence 4689999999999 7878 899999 787764
No 296
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=98.08 E-value=1.7e-05 Score=40.71 Aligned_cols=48 Identities=21% Similarity=0.261 Sum_probs=32.1
Q ss_pred eEEEEc--CCEEeecCCCceEEecCCCeEEEEeeEeeecC--CeEEEEeCCCcE
Q psy4606 3 YLDVVV--PPDILNEESSSDIMAPEGGTIKLVCKAKGYPR--PHITWKREDGQE 52 (69)
Q Consensus 3 ~l~V~~--~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~--P~~~W~~~~~~~ 52 (69)
.|.|.. +|.+...+ ...+.+.+|+.+.|.|.+.|.|. +.+.|++ ++..
T Consensus 96 ~l~v~~~~~p~~~~~~-~~~~~v~~G~~v~L~C~~~g~p~~~~~i~W~~-~g~~ 147 (213)
T 2x1w_L 96 IVVVVGYRIYDVVLSP-SHGIELSVGEKLVLNCTARTELNVGIDFNWEY-PSSK 147 (213)
T ss_dssp EEEECBCCEEEEEEES-CSCEEEETTCCEEEEEEEEECTTBCCEEEEEC-SCSS
T ss_pred EEEEeCCcccceEEcC-CCCeEEcCCCCEEEEEEEECCCCCceEEEEEe-cCCc
Confidence 344543 34444432 44457889999999999999654 5799998 4543
No 297
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=98.08 E-value=1e-05 Score=43.33 Aligned_cols=50 Identities=26% Similarity=0.503 Sum_probs=34.8
Q ss_pred eEEEEcCCEEeecCCCceEEecCCCeEEEEeeE-eeecCCeEEEEeCCCcEE
Q psy4606 3 YLDVVVPPDILNEESSSDIMAPEGGTIKLVCKA-KGYPRPHITWKREDGQEI 53 (69)
Q Consensus 3 ~l~V~~~p~~~~~~~~~~~~~~~g~~~~l~C~~-~g~P~P~~~W~~~~~~~~ 53 (69)
.+.+..+|.......+.......+..+.|.|.+ .|.|.|.+.|++ ++..+
T Consensus 106 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~C~~~~g~P~~~i~W~~-~~~~~ 156 (308)
T 4fom_A 106 TVTVLVEPTVSLIKGPDSLIDGGNETVAAICIAATGKPVAHIDWEG-DLGEM 156 (308)
T ss_dssp EEEEEBCCEEEEEECSSCCCTTCSCEEEEEEEEEEEBSCCEEEECC-CSSBC
T ss_pred EEEeeeccccccccccceeEEcCCceEEEEEEecCCcCCceEEEEE-CCccc
Confidence 455666665443222445556678899999986 579999999999 55544
No 298
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=98.08 E-value=4.6e-06 Score=43.52 Aligned_cols=50 Identities=32% Similarity=0.637 Sum_probs=33.1
Q ss_pred eEEEEc------CCEEeecCCCceEEecCCCeEEEEeeEee-ecCC-eEEEEeCCCcEEE
Q psy4606 3 YLDVVV------PPDILNEESSSDIMAPEGGTIKLVCKAKG-YPRP-HITWKREDGQEII 54 (69)
Q Consensus 3 ~l~V~~------~p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~P~P-~~~W~~~~~~~~~ 54 (69)
.|.|.. +|.+.... +....+..|..+.|.|.+.| .|.| .+.|++ +|+.+.
T Consensus 111 ~l~V~~~~~~~~~P~v~~~~-~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k-~g~~l~ 168 (245)
T 3nfj_J 111 WLTVVEDLNKVFPPEVAVFE-PSEAEISHTQKATLVCLATGFFPDHVELSWWV-NGKEVH 168 (245)
T ss_dssp EEEEESCGGGCBCCEEEEEE-CCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEE-TTEEEC
T ss_pred EEEEEcccCCCCCCceEeec-CCcccccCCCceEEEEEEccCcCCCEEEEEEE-CCEECC
Confidence 466664 56554321 22222345899999999999 5555 689999 787764
No 299
>1uvq_A HLA class II histocompatibility antigen; immunology, MHC class II, diabetes, narcolepsy, autoimmune disease, structural proteomics in europe, spine, structural genomics; HET: NAG FUC BMA; 1.8A {Homo sapiens} SCOP: b.1.1.2 d.19.1.1 PDB: 3pl6_A* 4d8p_A 1s9v_A 2nna_A 1jk8_A*
Probab=98.08 E-value=2.3e-06 Score=44.35 Aligned_cols=46 Identities=22% Similarity=0.435 Sum_probs=31.5
Q ss_pred EEEcCCEEeecCCCceEEecCCCeEEEEeeEee-ecCC-eEEEEeCCCcEEE
Q psy4606 5 DVVVPPDILNEESSSDIMAPEGGTIKLVCKAKG-YPRP-HITWKREDGQEII 54 (69)
Q Consensus 5 ~V~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~P~P-~~~W~~~~~~~~~ 54 (69)
....+|.+...+ .. ....+..++|.|.+.| +|.+ .++|.+ +|+.+.
T Consensus 85 ~~~~~P~V~v~~--~~-~~~~~~~~tL~C~a~gFyP~~i~v~W~k-ng~~~~ 132 (197)
T 1uvq_A 85 ATNEVPEVTVFS--KS-PVTLGQPNTLICLVDNIFPPVVNITWLS-NGQSVT 132 (197)
T ss_dssp CCCCCCEEEEEE--SS-CCCTTSCEEEEEEEEEECSSCCEEEEEE-TTEEEC
T ss_pred cccCCCCccccc--CC-ccccCCccEEEEEEEeEcCCCCEEEEEE-CCEEcc
Confidence 344677765431 11 1234677999999999 7775 799999 887764
No 300
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=98.08 E-value=3.8e-06 Score=43.02 Aligned_cols=29 Identities=21% Similarity=0.370 Sum_probs=23.9
Q ss_pred cCCCeEEEEeeEeeec----CCeEEEEeCCCcEE
Q psy4606 24 PEGGTIKLVCKAKGYP----RPHITWKREDGQEI 53 (69)
Q Consensus 24 ~~g~~~~l~C~~~g~P----~P~~~W~~~~~~~~ 53 (69)
..|+.+.|.|.+.|.| .+.+.|++ ++..+
T Consensus 16 ~~G~~v~L~C~~~g~~p~~~~~~v~W~k-~~~~~ 48 (207)
T 1l6x_A 16 MISRTPEVTCVVVDVSHEDPEVKFNWYV-DGVEV 48 (207)
T ss_dssp CTTSCCEEEEEEEEECSSSCCCEEEEEE-TTEEE
T ss_pred ecCCceEEEEEEecccCCCCCeEEEEEE-CCccc
Confidence 5899999999999975 24999999 66554
No 301
>2q20_A VK1 O18/O8 germline light chain variable domain; Al, light chain amyloidosis, amyloid, immunoglobulin, protein fibril; 1.30A {Homo sapiens} PDB: 2kqm_A 3cdf_A 3cdc_A 2kqn_A 3cdy_A 2q1e_A 3dvi_A 1igm_L 1bww_A 1b0w_A 1bre_A 1qp1_A 3dvf_A 1rei_A 1wtl_A 1ar2_A 1fgv_L 2bx5_A 2uzi_L* 1bvk_A ...
Probab=98.08 E-value=1.1e-05 Score=37.61 Aligned_cols=31 Identities=19% Similarity=0.456 Sum_probs=27.2
Q ss_pred CceEEecCCCeEEEEeeEeeecCCeEEEEeC
Q psy4606 18 SSDIMAPEGGTIKLVCKAKGYPRPHITWKRE 48 (69)
Q Consensus 18 ~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~ 48 (69)
+..+.+.+|+.++|.|.+.+.|.+.+.|++.
T Consensus 10 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~ 40 (109)
T 2q20_A 10 PSSLSASVGDRVTITCQASQDISNYLNWYQQ 40 (109)
T ss_dssp CSEEEECTTCCEEEEEEESSCCTTCEEEEEE
T ss_pred CCEEEecCCCcEEEEEeeccCCCCcEEEEEE
Confidence 5567788999999999999988899999984
No 302
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=98.08 E-value=8.7e-06 Score=41.50 Aligned_cols=30 Identities=20% Similarity=0.407 Sum_probs=27.3
Q ss_pred CceEEecCCCeEEEEeeEeeecCCeEEEEe
Q psy4606 18 SSDIMAPEGGTIKLVCKAKGYPRPHITWKR 47 (69)
Q Consensus 18 ~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~ 47 (69)
+..+.+.+|+.+.|.|.+.|.|.|.+.|++
T Consensus 8 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k 37 (213)
T 3r06_A 8 PSSLPASLGDRVTINCQASQDISNYLNWYQ 37 (213)
T ss_dssp CSEEEECTTCCEEEEEEESSCCTTCEEEEE
T ss_pred CCEEEecCCCcEEEEEEeCCCcCceEEEEE
Confidence 556778899999999999999999999997
No 303
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=98.08 E-value=2.1e-05 Score=39.73 Aligned_cols=27 Identities=11% Similarity=0.302 Sum_probs=22.8
Q ss_pred CCeEEEEeeE-eeecCCeEEEEeCCCcEEE
Q psy4606 26 GGTIKLVCKA-KGYPRPHITWKREDGQEII 54 (69)
Q Consensus 26 g~~~~l~C~~-~g~P~P~~~W~~~~~~~~~ 54 (69)
+..+.|.|.+ .| |.|.+.|++ ++..+.
T Consensus 115 ~~~v~L~C~~~~g-p~p~i~W~~-~~~~l~ 142 (180)
T 2dru_A 115 CSNATLTCEVLEG-TDVELKLYQ-GKEHLR 142 (180)
T ss_dssp GGGTEEEEECSSC-TTCEEEEEE-TTEEEE
T ss_pred CCCEEEEEEeCCC-CCCEEEEEE-CCeECc
Confidence 4569999999 77 999999999 777765
No 304
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=98.07 E-value=1.9e-06 Score=45.98 Aligned_cols=30 Identities=30% Similarity=0.698 Sum_probs=24.5
Q ss_pred cCCCeEEEEeeEeee-cC-CeEEEEeCCCcEEE
Q psy4606 24 PEGGTIKLVCKAKGY-PR-PHITWKREDGQEII 54 (69)
Q Consensus 24 ~~g~~~~l~C~~~g~-P~-P~~~W~~~~~~~~~ 54 (69)
..|..+.|.|.+.|. |. |.+.|++ +++.+.
T Consensus 163 ~~g~~v~L~C~~~g~~P~~~~v~W~k-~g~~l~ 194 (279)
T 2wbj_D 163 SHTQKATLVCLATGFYPDHVELSWWV-NGKEVH 194 (279)
T ss_dssp HHHSCCEEEEEEEEEBSSCEEEEEEE-TTEECC
T ss_pred cCCCceEEEEEEeeEcCCCcEEEEEE-CCEECC
Confidence 468899999999996 54 7999999 776654
No 305
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=98.07 E-value=1.3e-05 Score=40.65 Aligned_cols=32 Identities=31% Similarity=0.595 Sum_probs=24.9
Q ss_pred EEecCCCeEEEEeeEeeecCCe---EEEEeCCCcE
Q psy4606 21 IMAPEGGTIKLVCKAKGYPRPH---ITWKREDGQE 52 (69)
Q Consensus 21 ~~~~~g~~~~l~C~~~g~P~P~---~~W~~~~~~~ 52 (69)
+.+..|+.+.|.|.+.|.|.+. +.|+|.++..
T Consensus 11 V~~~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~ 45 (225)
T 4fmk_A 11 VRGRLGGTVELPCHLLPPTTERVSQVTWQRLDGTV 45 (225)
T ss_dssp EEEETTSCEEECCEECSSCCCEEEEEEEECTTSCE
T ss_pred EEEecCCCEEEEEEEECCCCCceeEEEEEECCCcc
Confidence 4456899999999999987764 7899954443
No 306
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=98.06 E-value=4.9e-06 Score=43.57 Aligned_cols=28 Identities=14% Similarity=0.369 Sum_probs=23.1
Q ss_pred ecCCCeEEEEeeEeee-cC-CeEEEEeCCCc
Q psy4606 23 APEGGTIKLVCKAKGY-PR-PHITWKREDGQ 51 (69)
Q Consensus 23 ~~~g~~~~l~C~~~g~-P~-P~~~W~~~~~~ 51 (69)
+..|+.+.|.|.+.|. |. |.+.|++ ++.
T Consensus 144 ~~~g~~v~L~C~~~g~~P~~~~v~W~~-~~~ 173 (242)
T 1hxm_B 144 TKLQKAGTYLCLLEKFFPDVIKIHWEE-KKS 173 (242)
T ss_dssp GGSSSCEEEEEEEEEESSCCEEEEEEE-SSS
T ss_pred cccCCCceEEEEEeeEECCCeEEEEEc-CCC
Confidence 4568999999999995 75 7999999 554
No 307
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=98.06 E-value=1.4e-05 Score=41.44 Aligned_cols=45 Identities=22% Similarity=0.494 Sum_probs=32.7
Q ss_pred eeEEEEcCC-----E-EeecCCCceEEecCCCeEEEEeeEeeec--CCeEEEEeC
Q psy4606 2 GYLDVVVPP-----D-ILNEESSSDIMAPEGGTIKLVCKAKGYP--RPHITWKRE 48 (69)
Q Consensus 2 ~~l~V~~~p-----~-~~~~~~~~~~~~~~g~~~~l~C~~~g~P--~P~~~W~~~ 48 (69)
+.|.|..++ . +... +....+.+|+.+.|.|.+.|.| .+.+.|++.
T Consensus 106 ~~l~V~~~~~~~~~~~~~~~--~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~ 158 (240)
T 1moe_A 106 TKLEIKGGGSGGGGEVQLQQ--SGAELVEPGASVKLSCTASGFNIKDTYMHWVKQ 158 (240)
T ss_dssp EEEEECCCSCCCCCCCEEEE--CCCEEECTTCCEEEEEEEESSCGGGSCEEEEEE
T ss_pred EEEEEecCCCCCCceEEEeC--CCceEEeCCCcEEEEEEEcCccCCCCEEEEEEE
Confidence 357776542 2 3333 4456788999999999999977 469999983
No 308
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=98.06 E-value=1.3e-05 Score=42.81 Aligned_cols=30 Identities=17% Similarity=0.427 Sum_probs=26.6
Q ss_pred CceEEecCCCeEEEEeeEeeecCCeEEEEeC
Q psy4606 18 SSDIMAPEGGTIKLVCKAKGYPRPHITWKRE 48 (69)
Q Consensus 18 ~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~ 48 (69)
+....+.+|+.++|.|.+.|.| |.+.|+|.
T Consensus 169 p~~~~v~~G~~v~L~C~~~~~~-~~v~W~k~ 198 (282)
T 1qok_A 169 PAIMSASPGEKVTITCSASSSV-SYMHWFQQ 198 (282)
T ss_dssp CSEEEECTTCCEEEEEEESSCC-SCCEEEEE
T ss_pred CCEEEEcCCCcEEEEEEecCCC-ceEEEEEE
Confidence 5567788999999999999999 99999983
No 309
>1cd1_A CD1, MCD1D.1; immunology, MHC, TCR, glycoprotein, signal, immunoglobulin fold, T-cell; 2.67A {Mus musculus} SCOP: b.1.1.2 d.19.1.1
Probab=98.05 E-value=8.9e-06 Score=44.79 Aligned_cols=41 Identities=34% Similarity=0.635 Sum_probs=29.5
Q ss_pred cCCEEeecCCCceEEecCCCeEEEEeeEee-ecCC-eEEEEeCCCcEE
Q psy4606 8 VPPDILNEESSSDIMAPEGGTIKLVCKAKG-YPRP-HITWKREDGQEI 53 (69)
Q Consensus 8 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~P~P-~~~W~~~~~~~~ 53 (69)
++|.+... .. ....+..++|.|.|.| +|.+ .++|.+ +|+.+
T Consensus 184 ~~P~v~v~--~~--~~~~~~~~~L~C~a~gFyP~~i~v~W~~-~g~~~ 226 (315)
T 1cd1_A 184 EKPVAWLS--SV--PSSAHGHRQLVCHVSGFYPKPVWVMWMR-GDQEQ 226 (315)
T ss_dssp BCCEEEEE--EE--ECSSSSCEEEEEEEEEEBSSCEEEEEEE-TTEEC
T ss_pred CCCcceEE--eC--CCCCCCceEEEEEEeeeeCCCcEEEEEE-ccccC
Confidence 56766543 11 1234567999999999 8988 799999 78775
No 310
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=98.05 E-value=5.2e-06 Score=42.08 Aligned_cols=41 Identities=10% Similarity=0.259 Sum_probs=31.8
Q ss_pred cCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEE
Q psy4606 8 VPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEI 53 (69)
Q Consensus 8 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~ 53 (69)
.+|.+... +. ..+.+|+.+.|.|.+.|.|. .+.|+| ++..+
T Consensus 4 ~~P~i~~~--p~-~~v~~G~~v~L~C~~~~~~~-~~~W~k-~g~~~ 44 (196)
T 2d3v_A 4 SKATLWAE--PG-SVISRGNSVTIRCQGTLEAQ-EYRLVK-EGSPE 44 (196)
T ss_dssp CBCEEEEE--SC-SEEETTCCEEEEEECCTTCC-EEEEEE-TTCSS
T ss_pred CCCEEEeC--CC-CcccCCCeEEEEEeCCCCCc-EEEEEE-CCCCC
Confidence 46777766 43 36779999999999998765 999999 66544
No 311
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=98.05 E-value=5.8e-06 Score=43.16 Aligned_cols=44 Identities=18% Similarity=0.186 Sum_probs=30.8
Q ss_pred cCCEEeecCCCceEEecCCCeEEEEeeEeee-cC-C-eEEEEeCCCcEE
Q psy4606 8 VPPDILNEESSSDIMAPEGGTIKLVCKAKGY-PR-P-HITWKREDGQEI 53 (69)
Q Consensus 8 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~-P~-P-~~~W~~~~~~~~ 53 (69)
.+|.+.... +....+..|+.+.|.|.+.|. |. | .+.|++ +|+.+
T Consensus 11 ~~P~v~~~~-p~~~~v~~G~~v~L~C~~~g~~P~~p~~v~W~~-~g~~~ 57 (231)
T 2w59_A 11 SPIQLYAIP-PSPGELYISLDAKLRCLVVNLPSDSSLSVTWTR-EKSGN 57 (231)
T ss_dssp -CCEEEEEC-CCHHHHHTSCCCEEEEEEEEESCCTTCEEEEEC-SSSSC
T ss_pred CCCEEEEeC-cChhhcccCCceEEEEEEeCccCCCCeEEEEEc-CCeec
Confidence 355554221 444456789999999999994 75 6 999998 66655
No 312
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=98.05 E-value=2.7e-05 Score=39.07 Aligned_cols=27 Identities=7% Similarity=0.101 Sum_probs=23.0
Q ss_pred EEEeeEeeecCCeEEEEeCCCcEEEecC
Q psy4606 30 KLVCKAKGYPRPHITWKREDGQEIIIKE 57 (69)
Q Consensus 30 ~l~C~~~g~P~P~~~W~~~~~~~~~~~~ 57 (69)
.|.|.+.|.|.|.+.|++ ++..+....
T Consensus 109 ~L~C~~~~~p~p~i~W~~-~~~~l~~~~ 135 (171)
T 1ccz_A 109 TLTCEVLEGTDVELKLYQ-GKEHLRSLR 135 (171)
T ss_dssp EEEEECSSCSSCEEEEEE-TTEEEEEES
T ss_pred EEEEEeCCCCCcEEEEEE-CCEECcCCc
Confidence 799999999999999999 787776443
No 313
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=98.05 E-value=1.3e-05 Score=42.25 Aligned_cols=46 Identities=26% Similarity=0.606 Sum_probs=30.0
Q ss_pred eEEEE----cCCEEeecCCCceEEecCCCeEEEEeeEee-ecCC-eEEEEeCCCc
Q psy4606 3 YLDVV----VPPDILNEESSSDIMAPEGGTIKLVCKAKG-YPRP-HITWKREDGQ 51 (69)
Q Consensus 3 ~l~V~----~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~P~P-~~~W~~~~~~ 51 (69)
.|.|. .+|.+... ........|+.+.|.|.+.| .|.| .+.|++ ++.
T Consensus 114 ~l~V~~~~~~~P~i~~~--~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~-~~~ 165 (253)
T 3liz_H 114 LVTVSAAKTTPPSVYPL--APGSAAQTNSMVTLGCLVKGYFPEPVTVTWNS-GSL 165 (253)
T ss_dssp EEEECSSCCBCCEEEEE--CC------CCEEEEEEEEEEEBSSCCEEEEGG-GTB
T ss_pred EEEEeccCCCCCeEEEe--cCCcccCCCCcEEEEEEEeeEeCCCeEEEEEe-CCe
Confidence 56665 45666533 22234557999999999999 8888 899998 554
No 314
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=98.05 E-value=3.2e-06 Score=42.71 Aligned_cols=38 Identities=24% Similarity=0.660 Sum_probs=30.5
Q ss_pred CCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeC
Q psy4606 9 PPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKRE 48 (69)
Q Consensus 9 ~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~ 48 (69)
+..+... +....+.+|+.+.|.|.+.|.|.|.+.|++.
T Consensus 4 ~~~i~~~--~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~ 41 (209)
T 1nbq_A 4 SVTVHSS--EPEVRIPENNPVKLSCAYSGFSSPRVEWKFD 41 (209)
T ss_dssp CCEEECS--CSBCCEETTCCCEEECEEESCSSEEEEEEEE
T ss_pred eEEEEcC--CCceEEEcCCCEEEEEEEeCCCCcEEEEEEc
Confidence 3444443 5566778999999999999999999999994
No 315
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=98.04 E-value=5.4e-06 Score=47.03 Aligned_cols=42 Identities=24% Similarity=0.553 Sum_probs=33.3
Q ss_pred CCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEE
Q psy4606 9 PPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEII 54 (69)
Q Consensus 9 ~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~ 54 (69)
+|.+... +....+.+|+.++|.|.+. |.|.+.|+++++..+.
T Consensus 352 ~P~i~~~--~~~~~v~~G~~~~l~C~~~--p~p~i~W~~~~~~~~~ 393 (452)
T 3zyi_A 352 APFIMDA--PRDLNISEGRMAELKCRTP--PMSSVKWLLPNGTVLS 393 (452)
T ss_dssp CCCCSBC--CCCEECCTTSCCEECCBCC--TTSEEEEECTTSCEEC
T ss_pred Ccccccc--cccccccCCCEEEEEEeCC--CCCcEEEEeCCCcEec
Confidence 4555544 5667889999999999998 9999999996665554
No 316
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=98.04 E-value=9.2e-06 Score=41.37 Aligned_cols=41 Identities=20% Similarity=0.249 Sum_probs=31.3
Q ss_pred EcCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcE
Q psy4606 7 VVPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQE 52 (69)
Q Consensus 7 ~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~ 52 (69)
..+|.+... +. ..+.+|+.++|.|.+.+ |.+.+.|+| +|..
T Consensus 6 ~~~P~i~~~--p~-~~v~~G~~v~L~C~~~~-~~~~~~w~k-~g~~ 46 (201)
T 1nkr_A 6 HRKPSLLAH--PG-PLVKSEETVILQCWSDV-MFEHFLLHR-EGMF 46 (201)
T ss_dssp -CCCEEEEE--SC-SEEETTCCEEEEEEESS-CCSEEEEEE-ESSS
T ss_pred CCCCeEEEE--cC-CccCCCCcEEEEEeccC-CCCEEEEEE-CCCc
Confidence 356777665 43 56779999999999975 788999999 5654
No 317
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=98.04 E-value=1.2e-05 Score=41.89 Aligned_cols=29 Identities=28% Similarity=0.645 Sum_probs=23.4
Q ss_pred CCeEEEEeeEeee-c-CCeEEEEeCCCcEEEe
Q psy4606 26 GGTIKLVCKAKGY-P-RPHITWKREDGQEIII 55 (69)
Q Consensus 26 g~~~~l~C~~~g~-P-~P~~~W~~~~~~~~~~ 55 (69)
++.+.|.|.+.|. | .+.+.|++ +|+.+..
T Consensus 133 ~~~~~L~C~~~g~~P~~~~v~W~k-~g~~l~~ 163 (231)
T 2w59_A 133 LSRVTLSCLVRGFRPRDIEIRWLR-DHRAVPA 163 (231)
T ss_dssp SSEEEEEEEEEEEBSSCCEEEEEE-TTEECCG
T ss_pred cCceEEEEEEEeccCCCcEEEEEE-CCEECCC
Confidence 5679999999995 5 37999999 7877643
No 318
>3c5j_B MHC class II antigen; HLA, MHC class II, glycoprotein, immune response, membrane, transmembrane, GTP-binding, methylation; HET: NAG; 1.80A {Homo sapiens} PDB: 2q6w_B 1a6a_B* 1d5m_B* 1j8h_B* 1d5z_B* 1d5x_B* 1d6e_B* 2seb_B* 2wbj_B* 1ymm_B* 3l6f_B* 3s4s_B 3s5l_B 1fyt_B* 1seb_B 1bx2_B* 1zgl_B 1fv1_B 1h15_B* 1hqr_B ...
Probab=98.03 E-value=6.2e-06 Score=42.26 Aligned_cols=44 Identities=32% Similarity=0.561 Sum_probs=28.5
Q ss_pred EcCCEEeecCCCceEEecCCCeEEEEeeEee-ecCC-eEEEEeCCCcEEE
Q psy4606 7 VVPPDILNEESSSDIMAPEGGTIKLVCKAKG-YPRP-HITWKREDGQEII 54 (69)
Q Consensus 7 ~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~P~P-~~~W~~~~~~~~~ 54 (69)
.++|.+... +... ...+..++|.|.+.| +|.+ .++|.+ +|+.+.
T Consensus 94 ~~~P~v~v~--~~~~-~~~~~~~~L~C~~~gFyP~~i~v~W~~-~g~~~~ 139 (190)
T 3c5j_B 94 RVHPQVTVY--PAKT-QPLQHHNLLVCSVSGFYPGSIEVRWFR-NGQEEK 139 (190)
T ss_dssp CBCCEEEEE--EEC------CCCEEEEEEEEEBSSCCEEEEEE-TTEECS
T ss_pred ccCceEEEE--eCCc-cccCCceEEEEEEeeEECCceEEEEEE-CCeEcC
Confidence 356766543 2111 124677899999999 6776 899999 787763
No 319
>2e27_L Anti-ciguatoxin antibody, light chain; immunoglobulin fold, immune system; HET: AB0; 1.70A {Mus musculus} PDB: 3iy1_A
Probab=98.02 E-value=1.4e-05 Score=38.09 Aligned_cols=31 Identities=29% Similarity=0.609 Sum_probs=27.0
Q ss_pred CceEEecCCCeEEEEeeEeeecCCeEEEEeC
Q psy4606 18 SSDIMAPEGGTIKLVCKAKGYPRPHITWKRE 48 (69)
Q Consensus 18 ~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~ 48 (69)
+..+.+.+|+.++|.|.+.+.+.+.+.|++.
T Consensus 10 p~~v~v~~G~~vtL~C~~~~~~~~~v~W~r~ 40 (119)
T 2e27_L 10 PSSLSASLGGKVTITCKANQDIKKKIAWYQH 40 (119)
T ss_dssp CSEEEEETTCCEEEEEEESSCCTTCEEEEEE
T ss_pred CCeEEEeCCCCEEEEEEeCCCCCceEEEEEE
Confidence 4556788999999999999988899999984
No 320
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=98.02 E-value=1.3e-06 Score=45.55 Aligned_cols=31 Identities=26% Similarity=0.546 Sum_probs=24.2
Q ss_pred ecCCCeEEEEeeEeee-cC-CeEEEEeCCCcEE
Q psy4606 23 APEGGTIKLVCKAKGY-PR-PHITWKREDGQEI 53 (69)
Q Consensus 23 ~~~g~~~~l~C~~~g~-P~-P~~~W~~~~~~~~ 53 (69)
+..|+.+.|.|.+.|. |. +.+.|++.+|+.+
T Consensus 142 v~~g~~~~L~C~~~g~~P~~~~v~W~~~~g~~l 174 (230)
T 1ypz_F 142 TNLHKTGTYLCLLEAFFPDVIRVYWKEKDGNTI 174 (230)
T ss_dssp HHHHSCEEEEEEEEEESSCCCEEEEECTTSSCB
T ss_pred hccCCcceEEEEEeeecCCCeEEEEEccCCeEc
Confidence 3457889999999995 86 5999998555544
No 321
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=98.02 E-value=1.7e-05 Score=42.05 Aligned_cols=49 Identities=16% Similarity=0.309 Sum_probs=36.2
Q ss_pred eeEEEEc----CCEEeecCCCceEEecCCCeEEEEeeEeeecC-CeEEEEeCCCcEE
Q psy4606 2 GYLDVVV----PPDILNEESSSDIMAPEGGTIKLVCKAKGYPR-PHITWKREDGQEI 53 (69)
Q Consensus 2 ~~l~V~~----~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~-P~~~W~~~~~~~~ 53 (69)
..|.|.. +|.+... +....+..|+.+.|.|.+.|.|. +.+.|++ ++..+
T Consensus 175 ~~l~V~~~~~~~p~i~~~--~~~~~~~~g~~v~l~C~~~~~~~~~~~~w~~-~~~~~ 228 (292)
T 4dkd_C 175 IRLKVQKVIPGPPALTLV--PAELVRIRGEAAQIVCSASSVDVNFDVFLQH-NNTKL 228 (292)
T ss_dssp EEEEEECCCCSSCEEEEE--SSCBCCCSSSCEEEEEEEEESSSCCEEECCB-SSCCC
T ss_pred EEEEEeCCCCCCCeEEcc--CCceeEecCCCEEEEEEecCCCCceEEEEeC-CCccc
Confidence 4577776 8888766 44555678999999999999665 5688888 55433
No 322
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=98.01 E-value=8e-06 Score=46.42 Aligned_cols=47 Identities=19% Similarity=0.403 Sum_probs=32.4
Q ss_pred EcCCEEeecCCCceEEecCCCeEEEEeeEeee-cC-CeEEEEeCCCcEEEe
Q psy4606 7 VVPPDILNEESSSDIMAPEGGTIKLVCKAKGY-PR-PHITWKREDGQEIII 55 (69)
Q Consensus 7 ~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~-P~-P~~~W~~~~~~~~~~ 55 (69)
..+|.+...+ +....+..|..+.|.|.+.|. |. +.+.|++ +|+.+..
T Consensus 347 ~~~P~v~~~~-~~~~~v~~g~~~~L~C~~~g~~P~~~~v~W~k-~g~~l~~ 395 (475)
T 1iga_A 347 TFRPEVHLLP-PPSEELALNELVTLTCLARGFSPKDVLVRWLQ-GSQELPR 395 (475)
T ss_pred CCCCeEEEEC-CChHHhccCCceEEEEEEeeeECCCCEEEEEE-CCEECCC
Confidence 4677765442 222234578889999999995 53 5999999 7877643
No 323
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=98.01 E-value=1.2e-05 Score=42.27 Aligned_cols=37 Identities=11% Similarity=0.286 Sum_probs=30.2
Q ss_pred CCEEeecCCCceEEecCCCeEEEEeeEeeecCC----eEEEEe
Q psy4606 9 PPDILNEESSSDIMAPEGGTIKLVCKAKGYPRP----HITWKR 47 (69)
Q Consensus 9 ~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P----~~~W~~ 47 (69)
+|.+... +....+.+|+.+.|.|.+.|.|.| .+.|++
T Consensus 133 ~~~v~~~--p~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r 173 (253)
T 3uzq_A 133 ELVMTQT--PASLAVSLGQRATISCRASENVDRYGNSFMHWYQ 173 (253)
T ss_dssp -CCEEEE--CSEEEECTTSCEEEEEEESSCCEETTEECEEEEE
T ss_pred cceEECc--CCeEEEeCCCCEEEEEEecCccccCCCcEEEEEE
Confidence 4555555 566788999999999999998887 999998
No 324
>1uvq_B HLA class II histocompatibility antigen; immunology, MHC class II, diabetes, narcolepsy, autoimmune disease, structural proteomics in europe, spine, structural genomics; HET: NAG FUC BMA; 1.8A {Homo sapiens} SCOP: b.1.1.2 d.19.1.1 PDB: 3pl6_B* 1jk8_B* 2nna_B 1s9v_B 2iad_B 1muj_B* 1d9k_D* 1iak_B* 1jl4_B 1f3j_B* 2pxy_D 1k2d_B* 1u3h_D 2z31_D 3mbe_B* 1aqd_B 3pdo_B 3pgc_B 3pgd_B 1klu_B ...
Probab=98.01 E-value=7.2e-06 Score=42.33 Aligned_cols=43 Identities=28% Similarity=0.471 Sum_probs=26.5
Q ss_pred cCCEEeecCCCceEEecCCCeEEEEeeEee-ecCC-eEEEEeCCCcEEE
Q psy4606 8 VPPDILNEESSSDIMAPEGGTIKLVCKAKG-YPRP-HITWKREDGQEII 54 (69)
Q Consensus 8 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~P~P-~~~W~~~~~~~~~ 54 (69)
++|.+... +... ...+..++|.|.|.| +|.+ .++|.+ +|+.+.
T Consensus 93 ~~P~V~v~--~~~~-~~~~~~~~L~C~v~gFyP~~i~v~W~~-~g~~~~ 137 (198)
T 1uvq_B 93 VEPTVTIS--PSRT-EALNHHNLLVCSVTDFYPGQIKVRWFR-NDQEET 137 (198)
T ss_dssp BCCEEEEE--EC---------CEEEEEEEEEBSSCCEEEEEE-TTEEEC
T ss_pred ccceEEEE--ecCc-ccCCCCcEEEEEEeeEeCCceEEEEEE-CCEecc
Confidence 56766543 1111 124677899999999 6776 899999 787753
No 325
>2ywz_A NEW antigen receptor variable domain; IG VNAR, immune system; 2.21A {Orectolobus maculatus} PDB: 2ywy_A
Probab=98.00 E-value=3.1e-05 Score=36.30 Aligned_cols=31 Identities=23% Similarity=0.416 Sum_probs=26.4
Q ss_pred CceEEecCCCeEEEEeeEeee--cCCeEEEEeC
Q psy4606 18 SSDIMAPEGGTIKLVCKAKGY--PRPHITWKRE 48 (69)
Q Consensus 18 ~~~~~~~~g~~~~l~C~~~g~--P~P~~~W~~~ 48 (69)
+..+.+.+|+.++|.|.+.+. |.+.+.|++.
T Consensus 7 p~~~~~~~G~~v~L~C~~~~~~~~~~~v~W~r~ 39 (111)
T 2ywz_A 7 PRTITKETGESLTIKCVLKDHSCGLSSTTWYRT 39 (111)
T ss_dssp CSEEEECTTCCEEEEEEEESCSSCCCEEEEEEE
T ss_pred CCcEEEccCCCEEEEeEECCCCCCCCEEEEEEe
Confidence 556778899999999999885 6789999983
No 326
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=98.00 E-value=2e-06 Score=50.96 Aligned_cols=52 Identities=25% Similarity=0.454 Sum_probs=7.1
Q ss_pred eeEEEEcCCEEeecC-CCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEE
Q psy4606 2 GYLDVVVPPDILNEE-SSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEII 54 (69)
Q Consensus 2 ~~l~V~~~p~~~~~~-~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~ 54 (69)
..|.|..+|.+...+ ......+.+|+.+.|.|.+.|.|.|.+.|++ +|..+.
T Consensus 320 ~~l~V~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~-~g~~l~ 372 (772)
T 3v2a_R 320 TFVRVHEKPFVAFGSGMESLVEATVGERVRIPAKYLGYPPPEIKWYK-NGIPLE 372 (772)
T ss_dssp EEEEEECCCC--------------------------------------------
T ss_pred EEEEEeCCCeeEeccCCCCcEEEcCCCcEEEEEEEeeeCCCeEEEEE-CCEeCC
Confidence 357777888654331 1234567889999999999999999999999 776654
No 327
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=98.00 E-value=3.1e-06 Score=45.90 Aligned_cols=47 Identities=23% Similarity=0.446 Sum_probs=36.2
Q ss_pred eEEEEc-----CCEEeecCCCceEEecCCCeEEEEeeE---eeec-CCeEEEEeCCCcE
Q psy4606 3 YLDVVV-----PPDILNEESSSDIMAPEGGTIKLVCKA---KGYP-RPHITWKREDGQE 52 (69)
Q Consensus 3 ~l~V~~-----~p~~~~~~~~~~~~~~~g~~~~l~C~~---~g~P-~P~~~W~~~~~~~ 52 (69)
.|.|.. +|.+... +....+..|+.+.|.|.+ .|.| .|.+.|++ ++..
T Consensus 215 ~l~V~~~~~~~~P~i~~~--~~~~~v~~G~~v~L~C~~~~~~g~P~~~~v~W~~-~g~~ 270 (339)
T 3o4o_C 215 ELRIKKKKEETIPVIISP--LKTISASLGSRLTIPCKVFLGTGTPLTTMLWWTA-NDTH 270 (339)
T ss_dssp EEEEECCCCCCCCEECCC--SCCCCCCCCSCCCCCCCEEESSSCCSSCEEEEES-SSSC
T ss_pred EEEEEcCCCCCCCEEecC--CceeEeccCCCEEEEEEEECCCCCCCCceEEEEE-CCee
Confidence 466653 5566554 555677889999999999 8999 89999998 6654
No 328
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=97.99 E-value=1.5e-05 Score=42.42 Aligned_cols=47 Identities=26% Similarity=0.548 Sum_probs=31.2
Q ss_pred eEEEEc----CCEEeecCCCceEEecCCCeEEEEeeEee-ecCC-eEEEEeCCCcE
Q psy4606 3 YLDVVV----PPDILNEESSSDIMAPEGGTIKLVCKAKG-YPRP-HITWKREDGQE 52 (69)
Q Consensus 3 ~l~V~~----~p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~P~P-~~~W~~~~~~~ 52 (69)
.|.|.. +|.+...+ +. ..+..|+.+.|.|.+.| .|.| .+.|++ ++..
T Consensus 119 ~L~V~~~~~~~P~v~~~~-p~-~~v~~g~~v~L~C~~~g~~P~~i~v~W~k-~g~~ 171 (261)
T 2xqy_G 119 TLTVSSAKTTAPSVYPLA-PV-CGDTTGSSVTLGCLVKGYFPEPVTLTWNS-GSLS 171 (261)
T ss_dssp EEEECSSCCBCCEEEEEC-CC-CC--CCSEEEEEEEEEEEBSSCCEEEEGG-GTCC
T ss_pred EEEEccCCCCCCeEEEeC-CC-ccccCCCcEEEEEEEEeEeCCCCEEEEec-CCCc
Confidence 566764 45554331 22 22457999999999999 5888 999998 5544
No 329
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=97.99 E-value=1.3e-05 Score=40.81 Aligned_cols=31 Identities=16% Similarity=0.491 Sum_probs=27.3
Q ss_pred CceEEecCCCeEEEEeeEeeecCCeEEEEeC
Q psy4606 18 SSDIMAPEGGTIKLVCKAKGYPRPHITWKRE 48 (69)
Q Consensus 18 ~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~ 48 (69)
+..+.+.+|+.+.|.|.+.|.|.|.+.|++.
T Consensus 8 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~ 38 (213)
T 3d9a_L 8 PATLSVTPGNSVSLSCRASQSIGNNLHWYQQ 38 (213)
T ss_dssp CSEEEECTTCCEEEEEEESSCCTTCEEEEEE
T ss_pred CccEEEeCCCcEEEEEECCCCCCCCEEEEEe
Confidence 4566788999999999999999999999973
No 330
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=97.98 E-value=3.6e-05 Score=40.50 Aligned_cols=37 Identities=16% Similarity=0.306 Sum_probs=30.1
Q ss_pred CEEeecCCCceEEecCCCeEEEEeeEee-ecCCeEEEEeC
Q psy4606 10 PDILNEESSSDIMAPEGGTIKLVCKAKG-YPRPHITWKRE 48 (69)
Q Consensus 10 p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~P~P~~~W~~~ 48 (69)
|.+... +....+.+|+.+.|.|.+.+ .|.+.+.|++.
T Consensus 137 ~~v~~~--p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~ 174 (259)
T 3omz_A 137 QKVTQA--QSSVSMPVRKAVTLNCLYETSWWSYYIFWYKR 174 (259)
T ss_dssp CEEECC--CCCEEEETTCCEEECCEEECCCSSCEEEEEEE
T ss_pred eeeEEe--CCEEEEcCCCCEEEEEECCCccCCceEEEeee
Confidence 455554 56678889999999999988 48999999983
No 331
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=97.97 E-value=1.1e-05 Score=40.55 Aligned_cols=46 Identities=15% Similarity=0.270 Sum_probs=31.9
Q ss_pred eEEEEc---CCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEE
Q psy4606 3 YLDVVV---PPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEI 53 (69)
Q Consensus 3 ~l~V~~---~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~ 53 (69)
.|.|.. +|.+... + ...+.+|+.+.|.|.+.+.| +.+.|+| ++..+
T Consensus 85 ~l~V~~~~~~p~i~~~--p-~~~v~~G~~v~l~C~~~~~~-~~~~w~k-~g~~~ 133 (184)
T 2gi7_A 85 ELVATGVFAKPSLSAQ--P-GPAVSSGGDVTLQCQTRYGF-DQFALYK-EGDPA 133 (184)
T ss_dssp EEEEESSSCCCEEEEE--C-CCSSCCTTCEEEEEECSSCC-CEEEEEE-CCCCT
T ss_pred EEEecCcCCCCEEEeC--C-CceecCCCcEEEEEEcCCCC-cEEEEEE-CCCcC
Confidence 455642 5566554 3 33566899999999987755 7999999 66543
No 332
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=97.97 E-value=1.3e-05 Score=41.20 Aligned_cols=28 Identities=32% Similarity=0.679 Sum_probs=24.6
Q ss_pred CCCeEEEEeeEeeecCCeEEEEeCCCcEEEe
Q psy4606 25 EGGTIKLVCKAKGYPRPHITWKREDGQEIII 55 (69)
Q Consensus 25 ~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~ 55 (69)
+|+.+.|.|. |.|.|.+.|++ ++..+..
T Consensus 127 ~G~~v~L~C~--g~p~p~i~W~k-~~~~l~~ 154 (204)
T 1sy6_A 127 SGTTVILTCP--QYPGSEILWQH-NDKNIGG 154 (204)
T ss_dssp ETTEEEEECS--CCCSSCEEEEE-TTEEESC
T ss_pred cCCcEEEEcC--CCCCCceEEEE-CCEECCC
Confidence 8999999999 89999999999 7777643
No 333
>1qfw_M FV, antibody (anti beta subunit) (light chain); glycoprotein hormone; HET: NAG; 3.50A {Mus musculus} SCOP: b.1.1.1
Probab=97.96 E-value=1.5e-05 Score=37.12 Aligned_cols=31 Identities=19% Similarity=0.477 Sum_probs=26.8
Q ss_pred CceEEecCCCeEEEEeeEeeecCCeEEEEeC
Q psy4606 18 SSDIMAPEGGTIKLVCKAKGYPRPHITWKRE 48 (69)
Q Consensus 18 ~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~ 48 (69)
+..+.+.+|+.++|.|.+.+.+.+.+.|++.
T Consensus 8 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~ 38 (108)
T 1qfw_M 8 PKSMSMSVGERVTLSCKASETVDSFVSWYQQ 38 (108)
T ss_dssp CSCEECCTTCCEEEEEEESSCCCSCEEEEEE
T ss_pred CCeEEEcCCCCEEEEeeeCCCCCcEEEEEEE
Confidence 4556788999999999999988889999983
No 334
>1i8k_A Epidermal growth factor receptor antibody MR1SCFV light chain; antibody-peptide complex, immunoglobulin fold, type II' beta turn., immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 PDB: 1i8i_A
Probab=97.96 E-value=1.6e-05 Score=36.94 Aligned_cols=31 Identities=10% Similarity=0.384 Sum_probs=27.0
Q ss_pred CceEEecCCCeEEEEeeEeeecCCeEEEEeC
Q psy4606 18 SSDIMAPEGGTIKLVCKAKGYPRPHITWKRE 48 (69)
Q Consensus 18 ~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~ 48 (69)
+..+.+.+|+.++|.|.+.+.+.+.+.|++.
T Consensus 8 p~~~~~~~G~~v~L~C~~~~~~~~~v~W~r~ 38 (107)
T 1i8k_A 8 PASLSVATGEKVTIRCMTSTDIDDDMNWYQQ 38 (107)
T ss_dssp CSEEECCTTCCEEEEEEESSCCTTCEEEEEE
T ss_pred CCeEEecCCCCEEEEEEECCCCCCcEEEEEE
Confidence 4557788999999999999988899999984
No 335
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=97.96 E-value=1.2e-05 Score=40.75 Aligned_cols=41 Identities=15% Similarity=0.314 Sum_probs=31.9
Q ss_pred cCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEE
Q psy4606 8 VPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEI 53 (69)
Q Consensus 8 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~ 53 (69)
.+|.+... +. ..+.+|+.+.|.|.+.|.|. .+.|+| ++..+
T Consensus 4 ~~P~i~~~--p~-~~v~~G~~v~L~C~~~~~~~-~~~W~k-~g~~~ 44 (198)
T 1ugn_A 4 PKPTLWAE--PG-SVITQGSPVTLRCQGGQETQ-EYRLYR-EKKTA 44 (198)
T ss_dssp CCCEEEEE--SC-SEEETTCCEEEEEECCTTCC-CEEEEE-SSSCC
T ss_pred CCCeEecc--CC-CcccCCCcEEEEEEecCCCc-EEEEEE-CCccc
Confidence 46777765 43 36789999999999999775 699999 66554
No 336
>1iak_A MHC class II I-AK; histocompatibility antigen, peptide complex, histocompa antigen I-AK; HET: NAG; 1.90A {Mus musculus} SCOP: b.1.1.2 d.19.1.1 PDB: 1d9k_C* 1k2d_A* 1jl4_A 2pxy_C 1u3h_C 2z31_C 1muj_A* 1lnu_A* 3c5z_C 3c60_C 3c6l_C 3rdt_C 2iad_A 1iao_A 1es0_A 3cup_A* 3mbe_A* 1f3j_A*
Probab=97.96 E-value=4.1e-06 Score=43.47 Aligned_cols=45 Identities=22% Similarity=0.383 Sum_probs=30.5
Q ss_pred EEcCCEEeecCCCceEEecCCCeEEEEeeEee-ecCC-eEEEEeCCCcEEE
Q psy4606 6 VVVPPDILNEESSSDIMAPEGGTIKLVCKAKG-YPRP-HITWKREDGQEII 54 (69)
Q Consensus 6 V~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~P~P-~~~W~~~~~~~~~ 54 (69)
...+|.+...+.. ....+..++|.|.+.| +|.+ .++|.+ +|+.+.
T Consensus 87 r~~~P~V~v~~~~---~~~~~~~~tL~C~a~gFyP~~i~v~W~k-ng~~~~ 133 (199)
T 1iak_A 87 TNEAPQATVFPKS---PVLLGQPNTLICFVDNIFPPVINITWLR-NSKSVT 133 (199)
T ss_dssp CCCCCEEEEEESS---CCCTTSCEEEEEEEEEECSSCCEEEEEE-TTEECC
T ss_pred cccCCCcccccCC---ccccCCCcEEEEEEeeEeCCCcEEEEEE-CCEEcc
Confidence 3466766543111 1234667999999999 7775 799999 787763
No 337
>1mqk_L Antibody 7E2 FV fragment, light chain; membrane protein, cytochrome C oxidase, high- resolution structure, immune system; 1.28A {Mus musculus} SCOP: b.1.1.1 PDB: 1ar1_D 3ehb_D* 3hb3_D* 1qle_L* 1f6l_L 3iy2_A 1vfa_A 1dvf_A 1kir_A 1g7i_A 1g7j_A 1a2y_A 1kip_A 1kiq_A 1vfb_A 1g7h_A 1a7o_L 1g7l_A 1g7m_A 1a7n_L ...
Probab=97.96 E-value=1.9e-05 Score=37.58 Aligned_cols=31 Identities=19% Similarity=0.469 Sum_probs=27.2
Q ss_pred CceEEecCCCeEEEEeeEeeecCCeEEEEeC
Q psy4606 18 SSDIMAPEGGTIKLVCKAKGYPRPHITWKRE 48 (69)
Q Consensus 18 ~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~ 48 (69)
+..+.+.+|+.++|.|.+.+.|.+.+.|++.
T Consensus 8 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~ 38 (120)
T 1mqk_L 8 PVSLSASVGETVTITCRASENIYSYLAWYQQ 38 (120)
T ss_dssp CSEEEECTTCCEEEEEEESSCCTTCEEEEEE
T ss_pred CCeEEEcCCCcEEEEEEeCCCCCceEEEEEE
Confidence 5567788999999999999988899999984
No 338
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=97.96 E-value=1.7e-05 Score=42.67 Aligned_cols=31 Identities=16% Similarity=0.428 Sum_probs=26.7
Q ss_pred CceEEecCCCeEEEEeeEeeecCC------eEEEEeC
Q psy4606 18 SSDIMAPEGGTIKLVCKAKGYPRP------HITWKRE 48 (69)
Q Consensus 18 ~~~~~~~~g~~~~l~C~~~g~P~P------~~~W~~~ 48 (69)
+..+.+.+|+.++|.|.+.|.|.| .+.|++.
T Consensus 166 p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~ 202 (291)
T 2gki_A 166 PSSLAVSAGEKVTMSCKSSQSLFNSRTRKNYLAWYQQ 202 (291)
T ss_dssp CSEEEEETTSCEEEEEEESSCCEETTTTEECEEEEEE
T ss_pred CCEEEEcCCCcEEEEEEcCCccccccccceeEEEEEE
Confidence 556778899999999999998776 8999984
No 339
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=97.95 E-value=1.5e-05 Score=41.66 Aligned_cols=28 Identities=18% Similarity=0.283 Sum_probs=24.1
Q ss_pred EEecCCCeEEEEeeEeeec--CCeEEEEeC
Q psy4606 21 IMAPEGGTIKLVCKAKGYP--RPHITWKRE 48 (69)
Q Consensus 21 ~~~~~g~~~~l~C~~~g~P--~P~~~W~~~ 48 (69)
..+.+|+.+.|.|.+.|.| .|.+.|++.
T Consensus 132 ~~v~~G~~v~L~C~~~g~~~~~~~v~W~k~ 161 (242)
T 2znx_A 132 SLVKPSQTLSLTCSVTGDSITSDYXSXIRK 161 (242)
T ss_dssp SEECTTSCEEEEEEEESSCGGGSCEEEEEE
T ss_pred ceecCCCeEEEEEEEEccccCCcceeeEee
Confidence 4578999999999999975 589999984
No 340
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=97.95 E-value=5.6e-06 Score=43.64 Aligned_cols=31 Identities=16% Similarity=0.358 Sum_probs=26.8
Q ss_pred EecCCCeEEEEeeEee-ecCC--eEEEEeCCCcEE
Q psy4606 22 MAPEGGTIKLVCKAKG-YPRP--HITWKREDGQEI 53 (69)
Q Consensus 22 ~~~~g~~~~l~C~~~g-~P~P--~~~W~~~~~~~~ 53 (69)
.+.+|+.+.|.|.+.| .|.| .+.|++ ++..+
T Consensus 14 ~v~~G~~v~l~C~~~g~~p~p~~~v~W~k-~~~~l 47 (265)
T 2oz4_A 14 VLEVDTQGTVVCSLDGLFPVSEAQVHLAL-GDQRL 47 (265)
T ss_dssp EEETTEEEEEEEEEESCSCGGGCEEEEEE-TTEEC
T ss_pred eEecCCCEEEEEEccCCCCCcceEEEEEe-CCEEC
Confidence 5678999999999999 8888 999999 66654
No 341
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=97.95 E-value=2.1e-05 Score=41.08 Aligned_cols=31 Identities=23% Similarity=0.513 Sum_probs=27.7
Q ss_pred CceEEecCCCeEEEEeeEeeecCCeEEEEeC
Q psy4606 18 SSDIMAPEGGTIKLVCKAKGYPRPHITWKRE 48 (69)
Q Consensus 18 ~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~ 48 (69)
+..+.+.+|+.+.|.|.+.|.|.|.+.|++.
T Consensus 11 p~~~~v~~G~~v~L~C~~~~~~~~~i~W~k~ 41 (250)
T 3esu_F 11 TSSLSASLGDRVTISCRASQDIRNYLNWYQQ 41 (250)
T ss_dssp CSEEEECTTCCEEEEEEESSCCTTCEEEEEE
T ss_pred CCEEEeeCCCcEEEEEEecccCCceEEEEEE
Confidence 5567788999999999999999999999983
No 342
>1z9m_A GAPA225; nectin-like, IG-like domain, V domain, cell adhesion; 2.40A {Homo sapiens}
Probab=97.94 E-value=2e-05 Score=38.40 Aligned_cols=30 Identities=30% Similarity=0.598 Sum_probs=27.4
Q ss_pred CceEEecCCCeEEEEeeEeeecCCeEEEEe
Q psy4606 18 SSDIMAPEGGTIKLVCKAKGYPRPHITWKR 47 (69)
Q Consensus 18 ~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~ 47 (69)
+..+.+..|+.+.|.|.+.+.|.+.+.|++
T Consensus 45 p~~~~v~~G~~v~L~C~~~~~~~~~i~W~~ 74 (145)
T 1z9m_A 45 TSDETVVAGGTVVLKCQVKDHEDSSLQWSN 74 (145)
T ss_dssp CCCEEEETTSCEEEEEECSCCTTCCEEEEC
T ss_pred CceEEEEcCCCEEEEEEEcCCCCcEEEEEC
Confidence 566788999999999999999999999995
No 343
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=97.94 E-value=5e-05 Score=38.38 Aligned_cols=46 Identities=13% Similarity=0.220 Sum_probs=31.9
Q ss_pred eEEEEc---CCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEE
Q psy4606 3 YLDVVV---PPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEI 53 (69)
Q Consensus 3 ~l~V~~---~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~ 53 (69)
.|.|.. +|.+... +. ..+.+|+.++|.|.+.+. .+.+.|+| ++..+
T Consensus 91 ~l~V~~~~~~p~~~~~--~~-~~v~~G~~v~L~C~~~~~-~~~~~w~k-~g~~~ 139 (196)
T 3p2t_A 91 ELVMTGAYSKPTLSAL--PS-PLVTSGKSVTLLCQSRSP-MDTFLLCK-ERAAH 139 (196)
T ss_dssp EEEEECSSCCCEEEEE--SC-SEECTTCCEEEEEEEEEE-EEEEEEEE-TTCCC
T ss_pred EEEecCCCCCCEEEeC--Cc-ceecCCCeEEEEEecCCC-CCEEEEEe-CCCcc
Confidence 455652 4555544 32 256789999999999984 46899999 66543
No 344
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=97.93 E-value=4.1e-05 Score=40.32 Aligned_cols=36 Identities=14% Similarity=0.397 Sum_probs=29.0
Q ss_pred CCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEe
Q psy4606 9 PPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKR 47 (69)
Q Consensus 9 ~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~ 47 (69)
+|.+... +....+.+|+.++|.|.+.+. .|.+.|++
T Consensus 137 ~~~v~~~--p~~~~v~~G~~v~L~C~~~~~-~~~v~W~k 172 (256)
T 3tf7_C 137 EAAVTQS--PRNKVTVTGENVTLSCRQTNS-HNYMYWYR 172 (256)
T ss_dssp -CCEEES--CSEEEEETTCCEEECEEECSC-CSEEEEEE
T ss_pred ccEEEec--CCEEEEeCCCcEEEEEEcCCC-ceEEEEEE
Confidence 4556555 666778899999999999987 78999998
No 345
>3usa_D HLA class II histocompatibility antigen, DO beta; MHC class II fold, antigen presentation enzyme and inhibitor system; HET: NAG MAN PGE; 3.20A {Homo sapiens}
Probab=97.93 E-value=1.5e-05 Score=41.21 Aligned_cols=45 Identities=24% Similarity=0.324 Sum_probs=29.8
Q ss_pred cCCCeEEEEeeEee-ecCC-eEEEEeCCCcEEEecC-CcEEEeCCCCCC
Q psy4606 24 PEGGTIKLVCKAKG-YPRP-HITWKREDGQEIIIKE-GNTMVPKSKDIF 69 (69)
Q Consensus 24 ~~g~~~~l~C~~~g-~P~P-~~~W~~~~~~~~~~~~-~~~~~~~~~~l~ 69 (69)
..+....|.|.|.| +|.. .++|.+ ||+.+..+. ...++.+++++|
T Consensus 105 ~~~~~~~L~C~a~gFyP~~I~v~W~k-nG~~~~~~~~~~~~~pn~DgTf 152 (189)
T 3usa_D 105 LLHQHNLLHCSVTGFYPGDIKIKWFL-NGQEERAGVMSTGPIRNGDWTF 152 (189)
T ss_dssp CTTSCEEEEEEEEEEBSSCEEEEEEE-TTEECCSSEEECCCEECSSSCE
T ss_pred cCCCccceEEEEeeeECCeeEEEEEE-CCcccccceeecccEECCCCeE
Confidence 35778999999999 7876 578999 887654321 112344455543
No 346
>2bc4_A HLA class II histocompatibility antigen, DM alpha chain; MHC class II, immune system; HET: NDG BMA; 2.27A {Homo sapiens} PDB: 1hdm_A 1k8i_A*
Probab=97.93 E-value=4.9e-05 Score=39.68 Aligned_cols=43 Identities=14% Similarity=0.190 Sum_probs=28.8
Q ss_pred CCCeEEEEeeEee-ecCC-eEEEEeCCCcEEEecCCcEEEeCCCCC
Q psy4606 25 EGGTIKLVCKAKG-YPRP-HITWKREDGQEIIIKEGNTMVPKSKDI 68 (69)
Q Consensus 25 ~g~~~~l~C~~~g-~P~P-~~~W~~~~~~~~~~~~~~~~~~~~~~l 68 (69)
.+..++|.|.+.| +|.. .++|.+ +|+.+..........+.+++
T Consensus 113 ~~~~~~L~C~~~gFyP~~i~v~W~~-~g~~~~~~~~~~~~~~~dgt 157 (211)
T 2bc4_A 113 FGKPNTLVCFVSNLFPPMLTVNWQH-HSVPVEGFGPTFVSAVDGLS 157 (211)
T ss_dssp TTSCEEEEEEEEEEBSSCEEEEEEE-TTEEECCSSCCEEEEETTTE
T ss_pred cCCcceEEEEEeeEeCCCCEEEEEE-CCEEcCCeeecceEECCCCc
Confidence 4667999999999 8875 689999 88876221222344444444
No 347
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=97.93 E-value=1.9e-05 Score=41.30 Aligned_cols=38 Identities=11% Similarity=0.203 Sum_probs=31.0
Q ss_pred cCCEEeecCCCceEEecCCCeEEEEeeEeeec-----CCeEEEEe
Q psy4606 8 VPPDILNEESSSDIMAPEGGTIKLVCKAKGYP-----RPHITWKR 47 (69)
Q Consensus 8 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P-----~P~~~W~~ 47 (69)
.++.+... +..+.+.+|+.+.|.|.+.|.| .|.+.|++
T Consensus 37 ~~~~~~~~--p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k 79 (254)
T 2c1o_A 37 RELVMTQS--PLTLSVTIGQPASISCKSSQSLLYSNGKTYLNWLL 79 (254)
T ss_dssp -CCCEEEE--CSEEEECTTSCEEEEEEESSCCBCSSSCBCEEEEE
T ss_pred eceeEEeC--CceEEecCCCcEEEEeeccCcccccCCCCceEEEE
Confidence 45666655 6678899999999999999987 49999997
No 348
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A
Probab=97.93 E-value=1.3e-05 Score=43.16 Aligned_cols=36 Identities=19% Similarity=0.243 Sum_probs=30.3
Q ss_pred CceEEecCCCeEEEEeeEee-------ecCCeEEEEeCCCcEEE
Q psy4606 18 SSDIMAPEGGTIKLVCKAKG-------YPRPHITWKREDGQEII 54 (69)
Q Consensus 18 ~~~~~~~~g~~~~l~C~~~g-------~P~P~~~W~~~~~~~~~ 54 (69)
+.+..+..|+.+.|.|.+.| .|.|.+.|++ +|+.+.
T Consensus 11 P~~~~v~~G~~v~l~C~~~~~~~~~~~~p~p~i~W~~-~g~~i~ 53 (303)
T 1i1r_A 11 PESPVVQLHSNFTAVCVLKEKCMDYFHVNANYIVWKT-NHFTIP 53 (303)
T ss_dssp SSSCEEETTCCEEEEEEECHHHHHHHTCCGGGEEEEE-TTEECC
T ss_pred cCCceEeCCCCEEEEEEECCccccccCCChhheEEEE-CCEECC
Confidence 55567889999999999996 4889999999 787764
No 349
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=97.92 E-value=2.1e-05 Score=41.09 Aligned_cols=31 Identities=13% Similarity=0.315 Sum_probs=27.6
Q ss_pred CceEEecCCCeEEEEeeEeeecCCeEEEEeC
Q psy4606 18 SSDIMAPEGGTIKLVCKAKGYPRPHITWKRE 48 (69)
Q Consensus 18 ~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~ 48 (69)
+..+.+.+|+.+.|.|.+.|.|.|.+.|++.
T Consensus 8 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~ 38 (242)
T 2znx_A 8 PATLSVTPGNSVSLSCRASQSIGNNLHXYQQ 38 (242)
T ss_dssp CSEEEECTTCCEEEEEEESSCCTTCEEEEEE
T ss_pred CCeEEEcCCCcEEEEEEeCCCCCceEEEEEe
Confidence 5567788999999999999999999999983
No 350
>2bc4_B HLA class II histocompatibility antigen, DM beta chain; MHC class II, immune system; HET: NDG BMA; 2.27A {Homo sapiens} PDB: 1hdm_B 1k8i_B*
Probab=97.92 E-value=2.8e-05 Score=40.45 Aligned_cols=44 Identities=25% Similarity=0.597 Sum_probs=30.5
Q ss_pred EcCCEEeecCCCceEEecCCCeEEEEeeEee-ecCC-eEEEEeCCCcEEE
Q psy4606 7 VVPPDILNEESSSDIMAPEGGTIKLVCKAKG-YPRP-HITWKREDGQEII 54 (69)
Q Consensus 7 ~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~P~P-~~~W~~~~~~~~~ 54 (69)
.++|.+... +.. ....+..++|.|.|.| +|.. .++|.+ +|+.+.
T Consensus 94 ~~~P~V~v~--~~~-~~~~~~~~~L~C~v~gFyP~~i~v~W~~-~g~~~~ 139 (211)
T 2bc4_B 94 TRPPSVQVA--KTT-PFNTREPVMLACYVWGFYPAEVTITWRK-NGKLVM 139 (211)
T ss_dssp CBCCEEEEE--ECC-CCSCSSSEEEEEEEEEEBSSCCEEEEEE-TTEEEC
T ss_pred cCCCeeEEE--eCC-cccCCCceEEEEEEeeeECCCcEEEEEE-CCEECC
Confidence 367766543 111 1235677999999999 6765 799999 888774
No 351
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=97.92 E-value=1e-05 Score=42.63 Aligned_cols=37 Identities=11% Similarity=0.343 Sum_probs=21.6
Q ss_pred CCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEe
Q psy4606 9 PPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKR 47 (69)
Q Consensus 9 ~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~ 47 (69)
+|.+... +..+.+.+|+.++|.|.+.+.|.|.+.|++
T Consensus 2 s~~v~~~--p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r 38 (259)
T 3omz_A 2 SSNLEGR--TKSVIRQTGSSAEITCDLAEGSTGYIHWYL 38 (259)
T ss_dssp -----------CEEEETTCCEEEECCC-----CEEEEEE
T ss_pred ccccccC--CceeEecCCCcEEEEEEEccCCCcEEEEEE
Confidence 3455444 566788899999999999999999999998
No 352
>1ntl_A CRRY-IG; immunology, complement, glycoprotein, SCR, CCP, immune system; NMR {Mus musculus}
Probab=97.92 E-value=1.5e-05 Score=46.55 Aligned_cols=44 Identities=16% Similarity=0.386 Sum_probs=29.8
Q ss_pred cCCEEeecCCCceEEecCCCeEEEEeeEee-ecC-CeEEEEeCCCcEEE
Q psy4606 8 VPPDILNEESSSDIMAPEGGTIKLVCKAKG-YPR-PHITWKREDGQEII 54 (69)
Q Consensus 8 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~P~-P~~~W~~~~~~~~~ 54 (69)
++|.+...+ + ......+..+.|.|.+.| +|. -.++|++ +|+.+.
T Consensus 448 ~~P~V~~~~-~-~~~~~~~~~~~L~C~v~gfyP~~i~v~W~k-~g~~~~ 493 (551)
T 1ntl_A 448 KAPQLYTIP-P-PKEQMAKDKVSLTCMITDFFPEDITVEWQW-NGQPAE 493 (551)
T ss_pred cCCceEEeC-C-ChhhccCCceEEEEEEEEeECCCCEEEEEE-CCEEcc
Confidence 566654431 1 112345889999999999 665 4799999 777654
No 353
>3bn3_B ICAM-5, intercellular adhesion molecule 5, telencephalin; I domain, integrin, allosteric mobility, cell adhesi immune system; HET: NAG; 2.10A {Homo sapiens}
Probab=97.91 E-value=1.8e-05 Score=41.14 Aligned_cols=50 Identities=28% Similarity=0.451 Sum_probs=35.1
Q ss_pred eEEEEcCCEEeecCCCceEEecCCCeEEEEeeEee-ecCCe--EEEEeCCCcEEE
Q psy4606 3 YLDVVVPPDILNEESSSDIMAPEGGTIKLVCKAKG-YPRPH--ITWKREDGQEII 54 (69)
Q Consensus 3 ~l~V~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~P~P~--~~W~~~~~~~~~ 54 (69)
.|.|+.+|...... ........|+.++|.|.+.| .|... ++|++ +++.+.
T Consensus 82 ~l~Vy~~P~~v~i~-~~~~~~~~G~~~tL~C~v~~~~P~~~L~i~wlk-g~~~l~ 134 (196)
T 3bn3_B 82 LIRTFQRPDRVELM-PLPPWQPVGENFTLSCRVPGAGPRASLTLTLLR-GAQELI 134 (196)
T ss_dssp EEEEEBCCCCCEEC-CCCSSEETTSEEEEEEEETTCBCGGGEEEEEEE-TTEEEE
T ss_pred EEEEecCCCcCEEc-cCCccccCCCcEEEEEEeCCccCCCCcEEEEEe-CCEEee
Confidence 56777777544321 22223678999999999998 77765 79999 777664
No 354
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=97.91 E-value=7.6e-06 Score=44.35 Aligned_cols=27 Identities=48% Similarity=0.888 Sum_probs=22.4
Q ss_pred CeEEEEeeEeee-c-CCeEEEEeCCCcEEE
Q psy4606 27 GTIKLVCKAKGY-P-RPHITWKREDGQEII 54 (69)
Q Consensus 27 ~~~~l~C~~~g~-P-~P~~~W~~~~~~~~~ 54 (69)
+.+.|.|.+.|. | .+.++|++ +|..+.
T Consensus 25 ~~v~L~C~~~g~~P~~~~v~W~k-~g~~l~ 53 (323)
T 2wqr_A 25 PTIQLLCLVSGYTPGTIQITWLE-DGQVMD 53 (323)
T ss_dssp SEEEEEEEEEEECCCCEEEEEEE-TTEECC
T ss_pred CcEEEEEEEeCeECCCeEEEEEE-CCEEcc
Confidence 599999999995 5 47999999 777654
No 355
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=97.91 E-value=1.8e-05 Score=40.33 Aligned_cols=31 Identities=16% Similarity=0.477 Sum_probs=27.1
Q ss_pred CceEEecCCCeEEEEeeEeeecCCeEEEEeC
Q psy4606 18 SSDIMAPEGGTIKLVCKAKGYPRPHITWKRE 48 (69)
Q Consensus 18 ~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~ 48 (69)
+....+.+|+.+.|.|.+.|.|.|.+.|++.
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~ 37 (210)
T 1lk3_L 7 PPALTVSPGEKLTISCKASESVTSRMHWYQQ 37 (210)
T ss_dssp CSEEEECTTSCEEEEEEESSCCTTCEEEEEE
T ss_pred CCcEEEcCCCCEEEEeeCCCccCCCEEEEEE
Confidence 4556788999999999999999999999983
No 356
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=97.90 E-value=4.2e-05 Score=38.18 Aligned_cols=31 Identities=26% Similarity=0.564 Sum_probs=27.0
Q ss_pred eEEecCCCeEEEEeeEeeecCCeEEEEeCCCc
Q psy4606 20 DIMAPEGGTIKLVCKAKGYPRPHITWKREDGQ 51 (69)
Q Consensus 20 ~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~ 51 (69)
.+.+.+|+.+.|.|.+.+.|.|.+.|++ ++.
T Consensus 4 ~v~~~~G~~v~L~C~~~~~~~~~i~W~~-~~~ 34 (184)
T 2ny1_B 4 VVLGKKGDTVELTCTASQKKSIQFHWKN-SNQ 34 (184)
T ss_dssp EEEEETTSCEEECCBCSSSSCCCEEEEE-TTC
T ss_pred cEEEeCCCCEEEEEEEcCCCceEEEEEe-CCc
Confidence 4567899999999999999999999999 443
No 357
>3huj_A R3G1, T-cell surface glycoprotein CD1D; CD1D, alpha-galactosylceramide, protein complex, cell membrane, disulfide bond, endosome; HET: NDG BMA NAG AGH; 2.50A {Homo sapiens} PDB: 3vwj_A* 3vwk_A* 4en3_C* 2po6_A* 3u0p_A* 3sdx_A* 1zt4_A* 3tzv_C*
Probab=97.90 E-value=3.5e-05 Score=41.95 Aligned_cols=28 Identities=43% Similarity=0.942 Sum_probs=23.4
Q ss_pred CCeEEEEeeEee-ecCC-eEEEEeCCCcEEE
Q psy4606 26 GGTIKLVCKAKG-YPRP-HITWKREDGQEII 54 (69)
Q Consensus 26 g~~~~l~C~~~g-~P~P-~~~W~~~~~~~~~ 54 (69)
+..+.|.|.|.| +|.+ .++|.+ +|+.+.
T Consensus 200 ~~~~~L~C~a~gFyP~~i~v~W~~-~g~~~~ 229 (284)
T 3huj_A 200 PGRLLLVCHVSGFYPKPVWVKWMR-GEQEQQ 229 (284)
T ss_dssp SSEEEEEEEEEEEBSSCCEEEEEE-TTEECT
T ss_pred CCceEEEEEECcEEccEEEEEEEE-CCEecc
Confidence 568999999999 8886 789999 787653
No 358
>4acp_A IG gamma-1 chain C region; immune system, antibody, kifunensine; HET: NAG; 2.49A {Homo sapiens} PDB: 2j6e_A*
Probab=97.90 E-value=6.3e-06 Score=43.65 Aligned_cols=44 Identities=16% Similarity=0.194 Sum_probs=28.3
Q ss_pred cCCEEeecCCCceEE-ecCCCeEEEEeeEeee---cCC-eEEEEeCCCcEE
Q psy4606 8 VPPDILNEESSSDIM-APEGGTIKLVCKAKGY---PRP-HITWKREDGQEI 53 (69)
Q Consensus 8 ~~p~~~~~~~~~~~~-~~~g~~~~l~C~~~g~---P~P-~~~W~~~~~~~~ 53 (69)
.+|.+...+ +.... +..|..+.|.|.+.|. |.+ .++|++ +|+.+
T Consensus 21 ~~P~v~i~~-ps~~~~l~~g~~~~L~C~v~g~~p~P~~i~v~W~k-~g~~l 69 (240)
T 4acp_A 21 GGPSVFLFP-PKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYV-DGVEV 69 (240)
T ss_dssp --CEEEEEC-CCHHHHHSSSSCCEEEEEEESCCC--CCCEEEEEE-TTEEE
T ss_pred CCCEEEEEC-cChHHhcccCCCcEEEEEEeccccCCCccEEEEEE-CCccc
Confidence 355554432 33333 4469999999999995 433 799999 77765
No 359
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=97.90 E-value=1.9e-05 Score=42.60 Aligned_cols=44 Identities=16% Similarity=0.243 Sum_probs=31.6
Q ss_pred EEEEcCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcE
Q psy4606 4 LDVVVPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQE 52 (69)
Q Consensus 4 l~V~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~ 52 (69)
..+..+|.+... +. ..+.+|+.+.|.|.+.|. .+.+.|+| ++..
T Consensus 19 ~~~~~~P~i~~~--p~-~~v~~G~~v~L~C~~~~~-~~~~~W~k-~g~~ 62 (316)
T 3vh8_G 19 MGGQDKPFLSAW--PS-AVVPRGGHVTLRCHYRHR-FNNFMLYK-EDRI 62 (316)
T ss_dssp -----CCEEEEE--SC-SEEETTSCEEEEEEBTTB-CCSEEEEE-SSCS
T ss_pred cCCCCCCEeecc--CC-CccCCCCCEEEEEEccCC-CceEEEEe-CCCc
Confidence 345567888776 43 456799999999999988 78999999 5544
No 360
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=97.90 E-value=4e-05 Score=41.52 Aligned_cols=29 Identities=14% Similarity=0.417 Sum_probs=23.8
Q ss_pred CCCeEEEEeeEee-ecCC-eEEEEeCCCcEEE
Q psy4606 25 EGGTIKLVCKAKG-YPRP-HITWKREDGQEII 54 (69)
Q Consensus 25 ~g~~~~l~C~~~g-~P~P-~~~W~~~~~~~~~ 54 (69)
.|+.+.|.|.+.| .|.+ .+.|++ +|+.+.
T Consensus 233 ~g~~~~l~C~~~g~~p~~~~v~W~k-~g~~l~ 263 (323)
T 2wqr_A 233 SRDKRTLACLIQNFMPEDISVQWLH-NEVQLP 263 (323)
T ss_dssp CTTEEEEEEEEEEEBSSCCEEEEEE-TTEECC
T ss_pred cCCcEEEEEEeeeeeCCCcEEEEEE-CCEECC
Confidence 3999999999999 5544 799999 787664
No 361
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=97.89 E-value=1.2e-05 Score=44.07 Aligned_cols=35 Identities=11% Similarity=0.139 Sum_probs=28.4
Q ss_pred ceEEecCCCeEEEEeeEee-----ecCCeEEEEeCCCcEEE
Q psy4606 19 SDIMAPEGGTIKLVCKAKG-----YPRPHITWKREDGQEII 54 (69)
Q Consensus 19 ~~~~~~~g~~~~l~C~~~g-----~P~P~~~W~~~~~~~~~ 54 (69)
....+.+|+.+.|.|.+.| .|.|.+.|++ +|..+.
T Consensus 184 ~~~~~~~G~~v~l~C~~~~~~~~~~P~p~i~W~~-~g~~~~ 223 (363)
T 1wio_A 184 SIVYKKEGEQVEFSFPLAFTVEKLTGSGELWWQA-ERASSS 223 (363)
T ss_dssp EEEEEETBCCEEEECCCCCCCCSSCEEEEEEEEE-SSCCCC
T ss_pred CceEEecCCEEEEEEEEecccccCCCceeEEEec-CCCCcc
Confidence 3456778999999998887 8999999999 665543
No 362
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=97.89 E-value=6.3e-06 Score=44.54 Aligned_cols=34 Identities=32% Similarity=0.791 Sum_probs=29.2
Q ss_pred eEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEE
Q psy4606 20 DIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEII 54 (69)
Q Consensus 20 ~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~ 54 (69)
...+.+|+.+.|.|.+.|.|.|.+.|++ ++..+.
T Consensus 132 ~~~v~~g~~v~l~C~~~g~p~~~v~W~~-~~~~~~ 165 (334)
T 1ry7_B 132 LLAVPAANTVRFRCPAAGNPTPSISWLK-NGREFR 165 (334)
T ss_dssp EEEEETTCCEEEECCCCCSSCCEEECCB-TTBCCC
T ss_pred eEEecCCCcEEEEEEccCCCCCeEEEEE-CCEECc
Confidence 3567789999999999999999999999 676654
No 363
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=97.89 E-value=9.8e-06 Score=42.68 Aligned_cols=30 Identities=23% Similarity=0.341 Sum_probs=25.1
Q ss_pred ecCCCeEEEEeeEeee---cCC-eEEEEeCCCcEE
Q psy4606 23 APEGGTIKLVCKAKGY---PRP-HITWKREDGQEI 53 (69)
Q Consensus 23 ~~~g~~~~l~C~~~g~---P~P-~~~W~~~~~~~~ 53 (69)
+.+|+.+.|.|.+.|. |.| .+.|++ ++..+
T Consensus 29 v~~G~~v~L~C~~~g~~~~P~~~~v~W~k-~~~~~ 62 (239)
T 1i1c_A 29 LGGGLTPKVTCVVVDISQNDPEVRFSWFI-DDVEV 62 (239)
T ss_dssp TTSSSCCEEEEEEEEECTTCCCCEEEEEE-SSCEE
T ss_pred cccCCcEEEEEEEecCccCCCCCEEEEEE-CCccc
Confidence 5689999999999997 888 899999 44443
No 364
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=97.89 E-value=3.4e-05 Score=42.34 Aligned_cols=31 Identities=10% Similarity=0.146 Sum_probs=26.2
Q ss_pred EecCCCeEEEEeeEeeecCCeEEEEeCCCcEE
Q psy4606 22 MAPEGGTIKLVCKAKGYPRPHITWKREDGQEI 53 (69)
Q Consensus 22 ~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~ 53 (69)
.+.+|+.+.|.|.+.|.|.|.+.|++ ++..+
T Consensus 107 ~v~~G~~v~l~C~~~~~p~~~v~W~~-~~~~~ 137 (363)
T 1wio_A 107 HLLQGQSLTLTLESPPGSSPSVQCRS-PRGKN 137 (363)
T ss_dssp SEESBSCEEEEEECCTTCCCCEEEEC-SSSCE
T ss_pred EEecCCCEEEEEEcCCCCCCeEEEEc-CCCcc
Confidence 45789999999999999999999999 44433
No 365
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=97.89 E-value=5.4e-05 Score=38.14 Aligned_cols=41 Identities=17% Similarity=0.259 Sum_probs=30.9
Q ss_pred CCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEE
Q psy4606 9 PPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEII 54 (69)
Q Consensus 9 ~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~ 54 (69)
+|.+... +.. .+.+|+.++|.|.+.+ +.+.+.|+| ++..+.
T Consensus 4 ~P~i~~~--p~~-~v~~G~~v~L~C~~~~-~~~~~~w~k-~g~~~~ 44 (188)
T 1oll_A 4 KPFIWAE--PHF-MVPKEKQVTICCQGNY-GAVEYQLHF-EGSLFA 44 (188)
T ss_dssp CCEEEEE--SCS-EEETTCCEEEEEECCT-TCCEEEEEE-TTEEEE
T ss_pred CCEEEee--cCC-cCCCCCCEEEEEecCC-CCCEEEEEE-CCCccc
Confidence 5677665 433 6788999999999976 457899999 676553
No 366
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=97.88 E-value=1.7e-05 Score=40.41 Aligned_cols=28 Identities=11% Similarity=0.324 Sum_probs=26.3
Q ss_pred eEEecCCCeEEEEeeEeeecCCeEEEEe
Q psy4606 20 DIMAPEGGTIKLVCKAKGYPRPHITWKR 47 (69)
Q Consensus 20 ~~~~~~g~~~~l~C~~~g~P~P~~~W~~ 47 (69)
.+.+.+|+.+.|.|.+.|.|.|.+.|++
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~v~W~k 36 (213)
T 3mj8_L 9 LVSVALGQKATITCSGDKLSDVYVHWYQ 36 (213)
T ss_dssp EEEEETTSCEEEEEECSSTTTSCEEEEE
T ss_pred cEEEeCCCCEEEEEEcCCCCCceEEEEE
Confidence 6778899999999999999999999998
No 367
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=97.88 E-value=4.8e-05 Score=39.89 Aligned_cols=29 Identities=28% Similarity=0.749 Sum_probs=24.8
Q ss_pred eEEecCCCeEEEEeeEeeec--CCeEEEEeC
Q psy4606 20 DIMAPEGGTIKLVCKAKGYP--RPHITWKRE 48 (69)
Q Consensus 20 ~~~~~~g~~~~l~C~~~g~P--~P~~~W~~~ 48 (69)
...+.+|+.+.|.|.+.|.| .+.+.|++.
T Consensus 143 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~ 173 (256)
T 3ux9_B 143 GGLVQPGGSLRLSCAASGFTFSSYAMSWVRQ 173 (256)
T ss_dssp CEEECTTCCEEEEEEEESSCGGGSEEEEEEE
T ss_pred CeEEcCCCeEEEEEEEeCCcccccEEEEEEE
Confidence 34588999999999999876 799999983
No 368
>3lqz_A HLA class II histocompatibility antigen, DP alpha; MHC, immune, disulfide bond, glycoprotein, immune respo membrane, MHC II, transmembrane, immune system; HET: NAG NDG; 3.25A {Homo sapiens}
Probab=97.88 E-value=1.1e-05 Score=41.30 Aligned_cols=47 Identities=19% Similarity=0.434 Sum_probs=31.3
Q ss_pred EEEEcCCEEeecCCCceEEecCCCeEEEEeeEee-ecCC-eEEEEeCCCcEEE
Q psy4606 4 LDVVVPPDILNEESSSDIMAPEGGTIKLVCKAKG-YPRP-HITWKREDGQEII 54 (69)
Q Consensus 4 l~V~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~P~P-~~~W~~~~~~~~~ 54 (69)
|..+.+|.+...+ .. ....|...+|.|.+.| +|.. .++|.+ +|+.+.
T Consensus 81 l~~~~~P~V~v~~--~~-~~~~~~~~~L~C~v~gFyP~~i~v~W~~-ng~~~~ 129 (181)
T 3lqz_A 81 QATNDPPEVTVFP--KE-PVELGQPNTLICHIDKFFPPVLNVTWLC-NGELVT 129 (181)
T ss_dssp CCCCBCCEEEEEE--SS-CCCTTCCEEEEEEEEEEBSCCCEEEEEE-TTEECC
T ss_pred ccccCCCeEEEEc--CC-ccccCCCeEEEEEEeeeECCCCEEEEEE-CCEECc
Confidence 3445677765431 11 1124667999999999 6765 789999 787664
No 369
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=97.87 E-value=2.9e-05 Score=39.61 Aligned_cols=28 Identities=21% Similarity=0.392 Sum_probs=26.1
Q ss_pred eEEecCCCeEEEEeeEeee-cCCeEEEEe
Q psy4606 20 DIMAPEGGTIKLVCKAKGY-PRPHITWKR 47 (69)
Q Consensus 20 ~~~~~~g~~~~l~C~~~g~-P~P~~~W~~ 47 (69)
.+.+.+|+.+.|.|.+.|. |.|.+.|++
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~v~W~k 37 (218)
T 3s96_B 9 SASFSLGASAKLTCTLNSQHSTYTIEWYQ 37 (218)
T ss_dssp EEEEETTSCEEEEEEECGGGTTCCEEEEE
T ss_pred cEEECCCCcEEEEEECCCCCCCcEEEEEE
Confidence 6778899999999999998 999999998
No 370
>1i3g_L Antibody FV fragment; antibiotic; 2.44A {Mus musculus} SCOP: b.1.1.1 PDB: 3iy6_A
Probab=97.87 E-value=3.5e-05 Score=36.05 Aligned_cols=31 Identities=16% Similarity=0.399 Sum_probs=26.9
Q ss_pred CceEEecCCCeEEEEeeEeeecCCeEEEEeC
Q psy4606 18 SSDIMAPEGGTIKLVCKAKGYPRPHITWKRE 48 (69)
Q Consensus 18 ~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~ 48 (69)
+..+.+.+|+.++|.|.+.+.+.+.+.|++.
T Consensus 11 p~~~~~~~G~~v~L~C~~~~~~~~~v~W~r~ 41 (111)
T 1i3g_L 11 HKFMSTSVGDRVSITCKASQDVGTAVAWYQQ 41 (111)
T ss_dssp CSEEECCTTCCEEEEEEESSCCTTCEEEEEE
T ss_pred CCEEEEcCCCCEEEEEEeCCCCCCCEEEEEE
Confidence 5557788999999999999888889999984
No 371
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=97.86 E-value=3.5e-05 Score=41.06 Aligned_cols=31 Identities=32% Similarity=0.725 Sum_probs=26.3
Q ss_pred CceEEecCCCeEEEEeeEeeec--CCeEEEEeC
Q psy4606 18 SSDIMAPEGGTIKLVCKAKGYP--RPHITWKRE 48 (69)
Q Consensus 18 ~~~~~~~~g~~~~l~C~~~g~P--~P~~~W~~~ 48 (69)
+....+.+|+.+.|.|.+.|.| .|.+.|++.
T Consensus 141 p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~k~ 173 (276)
T 3auv_A 141 SGGGLVQPGGSLRLSCAASGFTISDYWIHWVRQ 173 (276)
T ss_dssp ECCEEECTTCCEEEEEEEESSCGGGSEEEEEEE
T ss_pred CCceEecCCCeEEEEEEecCccCCCCEEEEEEc
Confidence 3456788999999999999966 699999984
No 372
>1onq_A T-cell surface glycoprotein CD1A; protein-glycolipid complex, beta sheet platform,, immune SYS; HET: NAG FUC SLF; 2.15A {Homo sapiens} SCOP: b.1.1.2 d.19.1.1 PDB: 1xz0_A*
Probab=97.86 E-value=2.6e-05 Score=42.39 Aligned_cols=28 Identities=43% Similarity=0.988 Sum_probs=23.5
Q ss_pred CCCeEEEEeeEee-ecCC-eEEEEeCCCcEE
Q psy4606 25 EGGTIKLVCKAKG-YPRP-HITWKREDGQEI 53 (69)
Q Consensus 25 ~g~~~~l~C~~~g-~P~P-~~~W~~~~~~~~ 53 (69)
.+..++|.|.|.| +|.+ .++|.+ +|+.+
T Consensus 198 ~~~~~~L~C~a~gFyP~~I~v~W~~-~g~~~ 227 (283)
T 1onq_A 198 GPGHLQLVCHVSGFYPKPVWVMWMR-GEQEQ 227 (283)
T ss_dssp STTEEEEEEEEEEEBSSCCEEEEEE-TTEEC
T ss_pred CCCceeEEEEEEeEECCceEEEEEE-CCeec
Confidence 4577999999999 8876 789999 78765
No 373
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=97.86 E-value=3.5e-05 Score=40.57 Aligned_cols=30 Identities=23% Similarity=0.509 Sum_probs=27.5
Q ss_pred CceEEecCCCeEEEEeeEeeecCCeEEEEe
Q psy4606 18 SSDIMAPEGGTIKLVCKAKGYPRPHITWKR 47 (69)
Q Consensus 18 ~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~ 47 (69)
+..+.+.+|+.+.|.|.+.+.|.|.+.|++
T Consensus 10 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r 39 (256)
T 3tf7_C 10 DARVTVSEGASLQLRCKYSYSATPYLFWYV 39 (256)
T ss_dssp CSEEEEETTSCEEECCEEECSSCCEEEEEE
T ss_pred CceEEecCCCeEEEEEEeCCCCCceEEEEE
Confidence 566788899999999999999999999997
No 374
>3f8u_B Tapasin; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens}
Probab=97.85 E-value=6.4e-05 Score=42.87 Aligned_cols=43 Identities=28% Similarity=0.574 Sum_probs=30.8
Q ss_pred eEEEEcCCEEeecCCCceEE-ecCCC-eEEEEeeEee-ecC--CeEEEE-e
Q psy4606 3 YLDVVVPPDILNEESSSDIM-APEGG-TIKLVCKAKG-YPR--PHITWK-R 47 (69)
Q Consensus 3 ~l~V~~~p~~~~~~~~~~~~-~~~g~-~~~l~C~~~g-~P~--P~~~W~-~ 47 (69)
.|.|..+|.+... +.... ...|+ .+.|.|.+.| +|. +.++|. +
T Consensus 285 ~L~V~~pP~V~v~--p~~~~~~~~G~~~vtL~C~a~GfyP~~~~~VtW~~r 333 (401)
T 3f8u_B 285 ELAVYKPPKVSLM--PATLARAAPGEAPPELLCLVSHFYPSGGLEVEWELR 333 (401)
T ss_dssp EEEEEBCCEEEEE--SSSCCCCCTTCCCCCEEEEEEEEBSSTTCEEEEEEE
T ss_pred EEeeccCCeEeec--cCcceeecCCCccEEEEEEecCCcCCCCcEEEEEec
Confidence 5778888887654 22222 33565 7999999999 676 799995 6
No 375
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=97.84 E-value=3.2e-05 Score=40.34 Aligned_cols=31 Identities=26% Similarity=0.712 Sum_probs=26.5
Q ss_pred CceEEecCCCeEEEEeeEeeec--CCeEEEEeC
Q psy4606 18 SSDIMAPEGGTIKLVCKAKGYP--RPHITWKRE 48 (69)
Q Consensus 18 ~~~~~~~~g~~~~l~C~~~g~P--~P~~~W~~~ 48 (69)
+....+.+|+.+.|.|.+.|.| .|.+.|++.
T Consensus 138 ~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~ 170 (250)
T 3esu_F 138 SGPELVKPGASVKISCKDSGYAFSSSWMNWVKQ 170 (250)
T ss_dssp CCCEEECTTCCEEEEEECCSTTGGGSEEEEEEE
T ss_pred CCceEEcCCceEEEEEEecCCcccCCEEEEEEE
Confidence 4456788999999999999876 899999983
No 376
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=97.84 E-value=3.1e-05 Score=46.24 Aligned_cols=44 Identities=18% Similarity=0.292 Sum_probs=34.6
Q ss_pred cCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEE-EEe-CCCcEEE
Q psy4606 8 VPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHIT-WKR-EDGQEII 54 (69)
Q Consensus 8 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~-W~~-~~~~~~~ 54 (69)
.+|.+. . +.+..+..|+.+.|.|.+.|.|.|.+. |++ .+|+.+.
T Consensus 164 ~~p~~~-~--~~~~~v~~G~~v~l~C~~~g~P~p~i~~W~~~~~g~~l~ 209 (731)
T 2v5y_A 164 RTPHFL-R--IQNVEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAP 209 (731)
T ss_dssp SSCEEC-C--CCCEEEETTSCEEEEEEEESCCCTTCEEEEEESSSCCEE
T ss_pred cccccc-c--ccceEEeCCCcEEEEEEeCCCCCCceeEEEecCCCcccc
Confidence 467776 3 456788999999999999999999988 882 2676654
No 377
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=97.84 E-value=2.8e-05 Score=43.70 Aligned_cols=46 Identities=28% Similarity=0.599 Sum_probs=31.4
Q ss_pred eEEEEc----CCEEeecCCCceEEecCCCeEEEEeeEeee-cCC-eEEEEeCCCc
Q psy4606 3 YLDVVV----PPDILNEESSSDIMAPEGGTIKLVCKAKGY-PRP-HITWKREDGQ 51 (69)
Q Consensus 3 ~l~V~~----~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~-P~P-~~~W~~~~~~ 51 (69)
.|.|.. +|.+...+ +. ..+.+|+.+.|.|.+.|. |.| .+.|++ ++.
T Consensus 109 ~l~V~~~~~~~P~i~~~~-~~-~~~~~G~~v~L~C~~~g~~P~p~~v~W~k-~~~ 160 (434)
T 1igy_B 109 TVTVSSAKTTPPSVYPLA-PG-SAAQTNSMVTLGCLVKGYFPEPVTVTWNS-GSL 160 (434)
T ss_dssp ECEECCSCCBCCCEEEEC-CC-CCCCCTTEEEEEEEEEEEBSSCCEEEETT-TTB
T ss_pred EEEEccCCCCCCeEEEcC-Cc-cccCCCCcEEEEEEEeeecCCCeEEEEee-CCc
Confidence 566652 45544321 21 234689999999999995 888 999998 554
No 378
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=97.84 E-value=3.6e-05 Score=38.93 Aligned_cols=29 Identities=10% Similarity=0.165 Sum_probs=24.6
Q ss_pred ceEEecCCCeEEEEeeEeeecC-----CeEEEEe
Q psy4606 19 SDIMAPEGGTIKLVCKAKGYPR-----PHITWKR 47 (69)
Q Consensus 19 ~~~~~~~g~~~~l~C~~~g~P~-----P~~~W~~ 47 (69)
..+.+.+|+.+.|.|.+.|.|. |.+.|++
T Consensus 10 ~~v~v~~G~~v~L~C~~~~~p~~~~~~~~v~W~k 43 (202)
T 3bp6_B 10 EVYTVDVGSSVSLECDFDRRECTELEGIRASLQK 43 (202)
T ss_dssp SEEEEETTSCEEEEEEECTTC---CTTEEEEEEE
T ss_pred cCEEEeCCCcEEEEEEecCCCCCCccceEEEEEc
Confidence 3456778999999999999887 8999999
No 379
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=97.83 E-value=1.7e-06 Score=44.68 Aligned_cols=30 Identities=27% Similarity=0.640 Sum_probs=23.9
Q ss_pred cCCCeEEEEeeEeee-cC-CeEEEEeCCCcEEE
Q psy4606 24 PEGGTIKLVCKAKGY-PR-PHITWKREDGQEII 54 (69)
Q Consensus 24 ~~g~~~~l~C~~~g~-P~-P~~~W~~~~~~~~~ 54 (69)
..|+.+.|.|.+.|. |. +.+.|++ +|+.+.
T Consensus 148 ~~g~~v~L~C~~~g~~p~~~~v~W~k-~g~~l~ 179 (234)
T 2j6e_L 148 LQANKATLVCLISDFFPGAVTVAWKA-DGAPVK 179 (234)
T ss_dssp HTTSCCCEEECCCBCSSCCCEEEEEE-TTEECC
T ss_pred hcCCceEEEEEEEEEcCCceEEEEEE-CCEECC
Confidence 357899999999995 54 3899999 777654
No 380
>4g43_A MHC class I alpha chain 2; MHC I complex, narrow binding groove, immune system; 1.80A {Gallus gallus} PDB: 4g42_A 4e0r_A 3bev_A 3bew_A
Probab=97.83 E-value=6.6e-05 Score=40.62 Aligned_cols=44 Identities=32% Similarity=0.754 Sum_probs=30.1
Q ss_pred CCCeEEEEeeEee-ecCC-eEEEEeCCCcEEEecCC-cEEEeCCCCCC
Q psy4606 25 EGGTIKLVCKAKG-YPRP-HITWKREDGQEIIIKEG-NTMVPKSKDIF 69 (69)
Q Consensus 25 ~g~~~~l~C~~~g-~P~P-~~~W~~~~~~~~~~~~~-~~~~~~~~~l~ 69 (69)
.+..++|.|.|.| +|.+ .++|.+ +|+.+..+.. ..+..+.+++|
T Consensus 194 ~~~~~~L~C~~~gFyP~~i~v~W~~-~g~~~~~~~~~~~~~~~~dgtf 240 (275)
T 4g43_A 194 ADGILTLSCRAHGFYPRPIVVSWLK-DGAVRGQDAHSGGIVPNGDGTY 240 (275)
T ss_dssp CSSCEEEEEEEEEEBSSCCEEEEEE-TTEECCTTEEEEEEEECTTSCE
T ss_pred CCCcceEEEEEeeEeCCcEEEEEEE-CCEEccCccccCCceECCCCCE
Confidence 5678999999999 8886 789999 7876542211 23444555543
No 381
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=97.82 E-value=1.3e-05 Score=44.44 Aligned_cols=33 Identities=21% Similarity=0.334 Sum_probs=27.9
Q ss_pred CceEEecCCCeEEEEeeEeeecCCeEEEEeCCCc
Q psy4606 18 SSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQ 51 (69)
Q Consensus 18 ~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~ 51 (69)
+..+.+.+|+.+.|.|.+.| |.|.+.|+++++.
T Consensus 253 ~~~v~v~~G~~~~l~C~~~g-p~p~i~W~~~~~~ 285 (361)
T 2xot_A 253 ESAWEAHLGDTLTIRCDTKQ-QGMTKVWVSPSNE 285 (361)
T ss_dssp CCCCEEETTCCEEECCCCSS-TTCEEEEECTTSC
T ss_pred ccCceecCCCeEEEEeEeeC-CCCeEEEEeCCCe
Confidence 34567889999999999999 9999999995443
No 382
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=97.82 E-value=2e-05 Score=42.22 Aligned_cols=34 Identities=24% Similarity=0.532 Sum_probs=29.1
Q ss_pred EEecCCCeEEEEeeE------eeecCCeEEEEeCCCcEEEe
Q psy4606 21 IMAPEGGTIKLVCKA------KGYPRPHITWKREDGQEIII 55 (69)
Q Consensus 21 ~~~~~g~~~~l~C~~------~g~P~P~~~W~~~~~~~~~~ 55 (69)
..+..|+.+.|.|.+ .|.|.|.+.|++ ++..+..
T Consensus 113 ~~~~~g~~v~l~C~~~~~~~~~g~p~~~i~W~k-~~~~l~~ 152 (315)
T 1itb_B 113 QKLPVAGDGGLVCPYMEFFKNENNELPKLQWYK-DCKPLLL 152 (315)
T ss_dssp EEEETTSCEEEECSSCTTTCTTTTCCCCCEEEE-TTEECCC
T ss_pred eEEecCCCeEEEEecccccccCCCCCCEEEEEE-CCEECCC
Confidence 457789999999998 899999999999 7777643
No 383
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=97.81 E-value=3.8e-05 Score=40.88 Aligned_cols=38 Identities=16% Similarity=0.412 Sum_probs=31.4
Q ss_pred CCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeC
Q psy4606 9 PPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKRE 48 (69)
Q Consensus 9 ~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~ 48 (69)
.+.+... +..+.+.+|+.+.|.|.+.+.|.|.+.|++.
T Consensus 12 ~~~v~~~--p~~~~v~~G~~v~L~C~~~~~p~~~i~W~r~ 49 (276)
T 3auv_A 12 DIQMTQS--PSSLSASVGDRVTITCRASQDVSTAVAWYQQ 49 (276)
T ss_dssp CCCEEEE--CSEEECCTTCCEEEEEEESSCCTTCEEEEEE
T ss_pred ceeEEeC--CCeEEEcCCCCEEEEeEcCCCCCCcEEEEEE
Confidence 3445554 6677889999999999999999999999984
No 384
>3g08_A T-cell surface glycoprotein CD1D1; antigen presentation, glycolipid, NKT cells, cell membrane, glycoprotein, immune response, immunoglobulin domain; HET: NAG FEE PLM; 1.60A {Mus musculus} PDB: 1z5l_A* 2gaz_A* 2q7y_A* 2akr_A* 3ma7_C* 3o8x_A* 3o9w_A* 3qux_A* 3quy_A* 3quz_A* 3rzc_A* 3t1f_A* 3ta3_A* 3tvm_A* 4elm_A* 3ubx_A* 3ilp_A* 3ilq_C* 3rtq_A* 3rug_A* ...
Probab=97.81 E-value=2.9e-05 Score=42.33 Aligned_cols=27 Identities=44% Similarity=0.984 Sum_probs=21.7
Q ss_pred CCeEEEEeeEee-ecCC-eEEEEeCCCcEE
Q psy4606 26 GGTIKLVCKAKG-YPRP-HITWKREDGQEI 53 (69)
Q Consensus 26 g~~~~l~C~~~g-~P~P-~~~W~~~~~~~~ 53 (69)
+..+.|.|.|.| +|.+ .++|.+ +|+.+
T Consensus 201 ~~~~~L~C~a~gFyP~~i~v~W~~-~g~~~ 229 (285)
T 3g08_A 201 HGHRQLVCHVSGFYPKPVWVMWMR-GDQEQ 229 (285)
T ss_dssp --CEEEEEEEEEEBSSCCEEEEEE-TTEEC
T ss_pred CCceEEEEEECcEECCceEEEEEE-CCccc
Confidence 467899999999 8876 789999 78765
No 385
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=97.81 E-value=3.9e-05 Score=41.87 Aligned_cols=50 Identities=24% Similarity=0.461 Sum_probs=34.9
Q ss_pred eEEEEcCCEEeecCCCceEEecCCCeEEEEeeEee-ecCC--eEEEEeCCCcEEE
Q psy4606 3 YLDVVVPPDILNEESSSDIMAPEGGTIKLVCKAKG-YPRP--HITWKREDGQEII 54 (69)
Q Consensus 3 ~l~V~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~P~P--~~~W~~~~~~~~~ 54 (69)
.|.|..+|.-.... .......+|+.++|.|.+.| .|.+ .++|+| +++.+.
T Consensus 79 ~l~V~~~P~~v~I~-~~~~~~~~G~~~~LtC~v~g~~P~~~l~itW~k-g~~~l~ 131 (291)
T 1mq8_A 79 FLTVYWTPERVELA-PLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLR-GEKELK 131 (291)
T ss_dssp EEEECBCCSCCCBC-CCCSBCCSSCCCEEEEEECCCBSTTTEEEEEES-SSSEEE
T ss_pred EEEEecCCCCCEEe-cCCccccCCCCEEEEEEecCccCCCCcEEEEEE-CCEEee
Confidence 56777777544321 22234678999999999998 6765 589999 777664
No 386
>3u2s_H PG9 heavy chain; greek KEY, immunoglobulin, immune recognition, immune system; HET: PCA TYS BU3 NAG BMA MAN; 1.80A {Homo sapiens} PDB: 3u4e_H* 3u36_H 3mug_B* 3lrs_H* 3mme_H* 2qsc_H*
Probab=97.80 E-value=4.6e-05 Score=40.29 Aligned_cols=28 Identities=29% Similarity=0.685 Sum_probs=19.8
Q ss_pred ecCCCeEEEEeeEee-ec-CCeEEEEeCCCc
Q psy4606 23 APEGGTIKLVCKAKG-YP-RPHITWKREDGQ 51 (69)
Q Consensus 23 ~~~g~~~~l~C~~~g-~P-~P~~~W~~~~~~ 51 (69)
...|+.+.|.|.+.| .| .+.+.|.+ ++.
T Consensus 153 ~~~g~~~~L~C~~~~~~P~~~~v~W~~-~g~ 182 (248)
T 3u2s_H 153 STSGGTAALGCLVKDYFPEPVTVSWNS-GAL 182 (248)
T ss_dssp ----CEEEEEEEEEEEBSSCCEEEEGG-GTB
T ss_pred ccCCCcEEEEEEEeeEECCCeEEEEeE-CCc
Confidence 446899999999998 66 45789998 554
No 387
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=97.80 E-value=5e-05 Score=40.55 Aligned_cols=47 Identities=13% Similarity=0.239 Sum_probs=33.3
Q ss_pred eEEEEc---CCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEE
Q psy4606 3 YLDVVV---PPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEII 54 (69)
Q Consensus 3 ~l~V~~---~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~ 54 (69)
.|.|.. +|.+... +. ..+.+|+.++|.|.+.+.| +.+.|+| +|..+.
T Consensus 98 ~L~V~~~~~~P~l~~~--p~-~~V~~G~~vtL~C~~~~~~-~~~~w~k-~g~~~~ 147 (257)
T 1b6u_A 98 DIVITGLYEKPSLSAQ--PG-PTVLAGESVTLSCSSRSSY-DMYHLSR-EGEAHE 147 (257)
T ss_dssp EEEEECSSCCCEEECS--SC-TTCBTTCEEEEEEECSSCC-SEEEEEE-TTSSCE
T ss_pred EEecccCCCCcceEcc--CC-CccCCCCEEEEEEeCCCCC-cEEEEEE-CCcccC
Confidence 566663 4566544 22 2467899999999998854 7999999 665543
No 388
>2vsd_A CHIR AB1; immune system receptor, FC receptor; HET: NAG NDG MAN; 1.82A {Gallus gallus}
Probab=97.80 E-value=3.6e-05 Score=35.80 Aligned_cols=41 Identities=17% Similarity=0.202 Sum_probs=29.6
Q ss_pred cCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEE
Q psy4606 8 VPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEI 53 (69)
Q Consensus 8 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~ 53 (69)
.+|.+... +.. .+.+|+.++|.|.+.+. .+.+.|+| +++.+
T Consensus 4 ~kP~i~~~--p~~-~v~~G~~VtL~C~~~~~-~~~~~w~k-~g~~~ 44 (105)
T 2vsd_A 4 PQPSLSLH--PSQ-GVSLGDTVTLRCHLPRM-AAWVQLWL-NGTLR 44 (105)
T ss_dssp CCCEEEEE--SCS-SCCTTCEEEEEEECCSS-CEEEEEEE-TTEEE
T ss_pred CCCEEEeC--CCC-CcCcCCCEEEEEEcCCC-CcEEEEEE-CCccc
Confidence 35666655 333 57789999999999875 36788999 66554
No 389
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=97.79 E-value=7.5e-05 Score=38.89 Aligned_cols=30 Identities=27% Similarity=0.759 Sum_probs=27.3
Q ss_pred CceEEecCCCeEEEEeeEeeecCCeEEEEe
Q psy4606 18 SSDIMAPEGGTIKLVCKAKGYPRPHITWKR 47 (69)
Q Consensus 18 ~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~ 47 (69)
+..+.+.+|+.+.|.|.+.+.|.+.+.|++
T Consensus 8 p~~v~v~~G~~v~L~C~~~~~~~~~v~W~k 37 (245)
T 3nfj_J 8 PATLVQPVGSPLSLECTVEGTSNPNLYWYR 37 (245)
T ss_dssp CSEEEEETTCCEEEEEEEESCSSCEEEEEE
T ss_pred CceEEecCCCCEEEEEEecCCCCceEEEEE
Confidence 556778899999999999999999999998
No 390
>1ypz_E T cell receptor delta, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=97.79 E-value=0.00024 Score=36.53 Aligned_cols=25 Identities=24% Similarity=0.611 Sum_probs=19.7
Q ss_pred EEEEeeEee-ecC-CeEEEEeCCCcEEEe
Q psy4606 29 IKLVCKAKG-YPR-PHITWKREDGQEIII 55 (69)
Q Consensus 29 ~~l~C~~~g-~P~-P~~~W~~~~~~~~~~ 55 (69)
+.|.|.+.| .|. |.+.|++ + ..+..
T Consensus 135 ~~l~C~~~g~~P~~~~v~W~~-~-~~l~~ 161 (207)
T 1ypz_E 135 TNVACLVKDFYPKEVTISLRS-S-KKIVE 161 (207)
T ss_dssp TEEEEEEEEESSSCCEEEEEC-S-SEEEE
T ss_pred CeEEEEEeeEeCCCeEEEEec-C-CcccC
Confidence 699999998 565 7999999 5 56543
No 391
>1t7v_A Zinc-alpha-2-glycoprotein; MHC class I homolog, PEG, lipid binding protein; HET: NAG P6G; 1.95A {Homo sapiens} SCOP: b.1.1.2 d.19.1.1 PDB: 1t7w_A* 1t7x_A* 1t7y_A* 1t7z_A* 1t80_A* 2icn_A* 3es6_A* 1zag_A*
Probab=97.78 E-value=7.3e-05 Score=40.51 Aligned_cols=56 Identities=23% Similarity=0.470 Sum_probs=34.9
Q ss_pred cCCEEeecCCCceEEecCCCeEEEEeeEee-ecCC-eEEEEeCCCcEEEecCCcEEEeCCCCCC
Q psy4606 8 VPPDILNEESSSDIMAPEGGTIKLVCKAKG-YPRP-HITWKREDGQEIIIKEGNTMVPKSKDIF 69 (69)
Q Consensus 8 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~P~P-~~~W~~~~~~~~~~~~~~~~~~~~~~l~ 69 (69)
++|.+... ... ..+..+.|.|.|.| +|.+ .++|.+ +|+.+..+....+..+.+++|
T Consensus 185 ~~P~v~v~--~~~---~~~~~~~L~C~~~gFyP~~i~v~W~~-~g~~~~~~~~~~~~p~~Dgtf 242 (278)
T 1t7v_A 185 DPPSVVVT--SHQ---APGEKKKLKCLAYDFYPGKIDVHWTR-AGEVQEPELRGDVLHNGNGTY 242 (278)
T ss_dssp BCCEEEEE--EEE---CTTSCEEEEEEEEEEBSSCEEEEEEE-TTEECCCSEEEEEEETTTTEE
T ss_pred CCCccccc--cCC---ccCCceeEEEEEeeEEcCcEEEEEEE-CCEEccCcccccceECCCCCE
Confidence 56766543 111 14667899999999 7776 588999 887764222123445555543
No 392
>3p73_A MHC RFP-Y class I alpha chain; IG-like C1-type (immunoglobulin-like) domain, histocompatibi antigen, immune system; HET: 16A; 1.32A {Gallus gallus} PDB: 3p77_A*
Probab=97.78 E-value=4.1e-05 Score=41.43 Aligned_cols=40 Identities=38% Similarity=0.768 Sum_probs=29.4
Q ss_pred cCCEEeecCCCceEEecCCCeEEEEeeEee-ecCC-eEEEEeCCCcEEE
Q psy4606 8 VPPDILNEESSSDIMAPEGGTIKLVCKAKG-YPRP-HITWKREDGQEII 54 (69)
Q Consensus 8 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~P~P-~~~W~~~~~~~~~ 54 (69)
++|.+... +. ..+..++|.|.|.| +|.+ .++|.+ +|+.+.
T Consensus 182 ~~P~v~v~--~~----~~~~~~~L~C~~~gFyP~~i~v~W~~-~g~~~~ 223 (275)
T 3p73_A 182 VQPEVRVW--GK----EADGILTLSCHAHGFYPRPITISWMK-DGMVRD 223 (275)
T ss_dssp BCCEEEEE--EE----EETTEEEEEEEEEEEBSSCCEEEEEE-TTEECG
T ss_pred CCCeEEEE--ee----ccCCCceEEEEEEEEcCCCCEEEEEE-CCEECC
Confidence 56766543 21 24678999999999 8887 799999 787653
No 393
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=97.78 E-value=4e-05 Score=43.11 Aligned_cols=46 Identities=24% Similarity=0.542 Sum_probs=31.2
Q ss_pred eEEEEc----CCEEeecCCCceEEecCCCeEEEEeeEee-ecCC-eEEEEeCCCc
Q psy4606 3 YLDVVV----PPDILNEESSSDIMAPEGGTIKLVCKAKG-YPRP-HITWKREDGQ 51 (69)
Q Consensus 3 ~l~V~~----~p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~P~P-~~~W~~~~~~ 51 (69)
.|.|.. +|.+...+ +. ....+|+.+.|.|.+.| .|.| .+.|++ ++.
T Consensus 113 ~l~V~~~~~~~P~i~~~~-~~-~~~~~g~~v~L~C~~~g~~P~p~~v~W~~-~~~ 164 (444)
T 1igt_B 113 TVTVSSAKTTAPSVYPLA-PV-CGDTTGSSVTLGCLVKGYFPEPVTLTWNS-GSL 164 (444)
T ss_dssp EEEECSCCCBCCEEEEEC-CC-SSCCCSSCEEEEEEEEEEBSSCCEEEEGG-GTB
T ss_pred EEEecCCCCCCCceeEec-cc-ccCCCCCcEEEEEEEcceeCCCcEEEEec-CCC
Confidence 466653 45554321 21 12368999999999999 4888 999998 554
No 394
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=97.78 E-value=4.6e-05 Score=39.69 Aligned_cols=30 Identities=20% Similarity=0.583 Sum_probs=27.2
Q ss_pred CceEEecCCCeEEEEeeEeeecCCeEEEEe
Q psy4606 18 SSDIMAPEGGTIKLVCKAKGYPRPHITWKR 47 (69)
Q Consensus 18 ~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~ 47 (69)
+..+.+.+|+.+.|.|.+.|.|.+.+.|++
T Consensus 8 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r 37 (246)
T 4dzb_B 8 PSWVISKSGTSVKIECRSLDFQATTMFWYR 37 (246)
T ss_dssp CSEEEEETTSCEEEEEEESSSCCCSEEEEE
T ss_pred CcEEEEeCCCcEEEEeEecCCCceEEEEEE
Confidence 556778899999999999999999999998
No 395
>3tv3_H PGT128 heavy chain, IG gamma-1 chain C region; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_H* 3twc_H* 3tje_H* 3thm_H* 4fqq_H 2xzc_H* 2xza_H* 3b2u_H* 3b2v_H* 3mly_H 3mlz_H 4fq2_H 2ykl_H* 3tnm_H 4fqc_H* 4fq1_H* 2yk1_H* 3mlx_H 2jix_D 2vxq_H ...
Probab=97.78 E-value=3.3e-05 Score=40.41 Aligned_cols=28 Identities=32% Similarity=0.792 Sum_probs=21.1
Q ss_pred ecCCCeEEEEeeEee-ecCCe-EEEEeCCCc
Q psy4606 23 APEGGTIKLVCKAKG-YPRPH-ITWKREDGQ 51 (69)
Q Consensus 23 ~~~g~~~~l~C~~~g-~P~P~-~~W~~~~~~ 51 (69)
...|+.+.|.|.+.| .|.|. +.|++ ++.
T Consensus 152 ~~~g~~v~l~C~~~~~~p~~~~v~W~~-~g~ 181 (239)
T 3tv3_H 152 STSGGTAALGCLVKDYFPEPVTVSWNS-GAL 181 (239)
T ss_dssp C--TTEEEEEEEEEEEBSSCCEEEEGG-GTB
T ss_pred hccCCcEEEEEEEeeEeCCCeEEEEEE-CCc
Confidence 446899999999999 66564 88998 554
No 396
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=97.78 E-value=0.0001 Score=41.95 Aligned_cols=27 Identities=33% Similarity=0.988 Sum_probs=22.9
Q ss_pred cCCCeEEEEeeEeee-cC-C-eEEEEeCCCc
Q psy4606 24 PEGGTIKLVCKAKGY-PR-P-HITWKREDGQ 51 (69)
Q Consensus 24 ~~g~~~~l~C~~~g~-P~-P-~~~W~~~~~~ 51 (69)
.+|+.+.|.|.+.|. |. | .+.|++ ++.
T Consensus 139 ~~g~~v~L~C~~~g~~P~~p~~v~W~~-~~~ 168 (475)
T 1iga_A 139 QPDGNVVIACLVQGFFPQEPLSVTWSE-SGQ 168 (475)
T ss_pred CCCCeEEEEEEEeeecCCCceEEEEcC-CCc
Confidence 589999999999995 77 6 999998 553
No 397
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=97.77 E-value=6e-05 Score=39.00 Aligned_cols=30 Identities=23% Similarity=0.582 Sum_probs=26.4
Q ss_pred CceEEecCCCeEEEEeeEeeecCCeEEEEeC
Q psy4606 18 SSDIMAPEGGTIKLVCKAKGYPRPHITWKRE 48 (69)
Q Consensus 18 ~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~ 48 (69)
+..+.+.+|+.+.|.|. .|.|.|.+.|++.
T Consensus 7 p~~~~v~~G~~v~L~C~-~~~~~~~i~W~k~ 36 (238)
T 2p1y_A 7 PRNKVAVTGGKVTLSCN-QTNNHNNMYWYRQ 36 (238)
T ss_dssp CSEEEEETTCCEEEEEE-ECSCCSEEEEEEE
T ss_pred ccceEEeCCCEEEEEee-cCCCCccEEEEEE
Confidence 55677889999999999 7899999999983
No 398
>2p24_A H-2 class II histocompatibility antigen, A-U ALPH; MHC, I-AU, immunoglobulin fold, MBP, immune system; 2.15A {Mus musculus} SCOP: b.1.1.2 d.19.1.1
Probab=97.77 E-value=4.5e-05 Score=40.48 Aligned_cols=29 Identities=28% Similarity=0.662 Sum_probs=23.7
Q ss_pred CCCeEEEEeeEee-ecCC-eEEEEeCCCcEEE
Q psy4606 25 EGGTIKLVCKAKG-YPRP-HITWKREDGQEII 54 (69)
Q Consensus 25 ~g~~~~l~C~~~g-~P~P-~~~W~~~~~~~~~ 54 (69)
.+...+|.|.+.| +|.. .++|.+ ||+.+.
T Consensus 133 ~~~~~tL~C~~~gFyP~~i~v~W~k-ng~~~~ 163 (236)
T 2p24_A 133 LGQPNTLICFVDNIFPPVINITWLR-NSKSVA 163 (236)
T ss_dssp TTCCEEEEEEEEEECSSCCEEEEEE-TTEEEC
T ss_pred cCCcceEEEEEEEEcCCCeEEEEEE-CCEEcC
Confidence 4667999999999 6764 789999 887764
No 399
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=97.77 E-value=8.4e-05 Score=38.74 Aligned_cols=28 Identities=29% Similarity=0.669 Sum_probs=24.1
Q ss_pred EEecCCCeEEEEeeEeeec--CCeEEEEeC
Q psy4606 21 IMAPEGGTIKLVCKAKGYP--RPHITWKRE 48 (69)
Q Consensus 21 ~~~~~g~~~~l~C~~~g~P--~P~~~W~~~ 48 (69)
..+.+|+.+.|.|.+.|.| .|.+.|++.
T Consensus 137 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~ 166 (247)
T 1svz_A 137 ELKKPGETVKISCKATNYAFTDYSMHWVKQ 166 (247)
T ss_dssp EEECTTCCEEEEEEEESSCGGGSCEEEEEE
T ss_pred eeecCCCcEEEEEEEcCcccCCcEEEEEEe
Confidence 4588999999999999974 679999984
No 400
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=97.76 E-value=6.3e-05 Score=38.75 Aligned_cols=36 Identities=17% Similarity=0.425 Sum_probs=29.9
Q ss_pred CEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEe
Q psy4606 10 PDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKR 47 (69)
Q Consensus 10 p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~ 47 (69)
+.+... +....+.+|+.+.|.|.+.|.|.+.+.|++
T Consensus 25 ~~v~~~--p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k 60 (237)
T 3sob_L 25 IQMTQS--PSSLSASVGDRVTITCRASQDVSTAVAWYQ 60 (237)
T ss_dssp CCEEEE--CSEEEEETTCCEEEEEEESSCCTTCEEEEE
T ss_pred ceEEeC--CCeEEEeCCCcEEEEEecCCCCCceEEEEE
Confidence 344444 556788899999999999999999999998
No 401
>4hwn_A FC receptor-like A; FCRLA, FCRL, IG-C2 domain, IG superfamily, immune system, ST genomics, PSI-biology; 2.01A {Homo sapiens}
Probab=97.76 E-value=6.8e-05 Score=35.05 Aligned_cols=43 Identities=19% Similarity=0.292 Sum_probs=27.0
Q ss_pred cCCEEeecCCCceEEecCCCeEEEEeeEeeecCC-----eEEEEeCCCcEEE
Q psy4606 8 VPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRP-----HITWKREDGQEII 54 (69)
Q Consensus 8 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P-----~~~W~~~~~~~~~ 54 (69)
.+|.+... +.. .+.+|+.++|.|.+.+.|.+ .+.|+| +|..+.
T Consensus 7 ~kP~l~~~--p~~-~v~~G~~VtL~C~~~~~~~~~~~~~~~~w~k-~g~~l~ 54 (108)
T 4hwn_A 7 PAPILRAV--PSA-EPQAGSPMTLSCQTKLPLQRSAARLLFSFYK-DGRIVQ 54 (108)
T ss_dssp CCCEEEEE--SCS-SCBTTCCEEEEEEC---------CCEEEEEE-TTEEEE
T ss_pred CCCEEEec--CCC-cCCCCCcEEEEEcccCCCCCcCcceEEEEEE-CCcCcc
Confidence 45666655 322 36689999999999876655 499999 777654
No 402
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=97.76 E-value=3.6e-05 Score=38.79 Aligned_cols=30 Identities=27% Similarity=0.476 Sum_probs=25.9
Q ss_pred CceEEecCCCeEEEEeeEeeecCCe---EEEEe
Q psy4606 18 SSDIMAPEGGTIKLVCKAKGYPRPH---ITWKR 47 (69)
Q Consensus 18 ~~~~~~~~g~~~~l~C~~~g~P~P~---~~W~~ 47 (69)
+..+.+..|+.+.|.|.+.|.|.|. +.|+|
T Consensus 6 p~~vtv~~G~~v~L~C~v~~~~~~~~~~V~W~k 38 (218)
T 4frw_A 6 SDVVTVVLGQDAKLPCFYRGDSGEQVGQVAWAR 38 (218)
T ss_dssp CSEEEEETTSCEEECCEECCCTTCEEEEEEEEE
T ss_pred CCeEEEEcCCCEEEEEEEEcCCCCCccEEEEEE
Confidence 5567788999999999999988764 78998
No 403
>3qhz_H Human monoclonal antibody DEL2D1, FAB heavy chain; immunoglobulin, immune recognition, influenza A hemagglutini system; 1.55A {Homo sapiens} PDB: 3lzf_H* 3qrg_H* 3mod_H 3mob_H 3moa_H 3lev_H* 3idg_B 3d0l_B 3d0v_B 3idi_B 3idj_B 3idm_B* 3idn_B* 1tjg_H* 1tjh_H* 1tji_H* 2pr4_H 3drq_B 2p8m_B 2p8p_B ...
Probab=97.76 E-value=3.5e-05 Score=40.01 Aligned_cols=46 Identities=24% Similarity=0.513 Sum_probs=25.7
Q ss_pred eEEEE----cCCEEeecCCCceEEecCCCeEEEEeeEeee-cC-CeEEEEeCCCc
Q psy4606 3 YLDVV----VPPDILNEESSSDIMAPEGGTIKLVCKAKGY-PR-PHITWKREDGQ 51 (69)
Q Consensus 3 ~l~V~----~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~-P~-P~~~W~~~~~~ 51 (69)
.|.|. .+|.+... .....+..|..+.|.|.+.|. |. ..+.|++ ++.
T Consensus 122 ~l~V~~~~~~~P~v~~~--~~~~~~~~g~~v~L~C~~~~~~P~~~~v~W~~-~g~ 173 (232)
T 3qhz_H 122 LVTVSSASTKGPSVFPL--APSSKSTSGGTAALGCLVKDYFPEPVTVSWNS-GAL 173 (232)
T ss_dssp EEEECSSCCBCCEEEEE--CC-------CEEEEEEEEEEEBSSCCEEEEGG-GTB
T ss_pred EEEEecCCCCCCEEEEe--cccccccCCCcEEEEEEEeeEeCCCeEEEEEE-CCE
Confidence 45554 35555533 222344569999999999994 42 3578998 554
No 404
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=97.75 E-value=3.3e-05 Score=39.12 Aligned_cols=33 Identities=15% Similarity=0.283 Sum_probs=25.8
Q ss_pred cCCCeEEEEeeEee-ecCCeEEEEeCCCcEEEecC
Q psy4606 24 PEGGTIKLVCKAKG-YPRPHITWKREDGQEIIIKE 57 (69)
Q Consensus 24 ~~g~~~~l~C~~~g-~P~P~~~W~~~~~~~~~~~~ 57 (69)
..+..+.|.|.+.| .|.|.+.|++ ++..+....
T Consensus 15 c~~~~~~l~C~~~~~~p~~~i~W~~-~g~~i~~~~ 48 (212)
T 2r15_A 15 STAEGIQLYSFVTYYVEDLKVNWSH-NGSAIRYSD 48 (212)
T ss_dssp ECSSEEEEEEEBSSCCSSCEEEEEE-TTEECCCCS
T ss_pred EcCceEEEEEEEeccCCCceEEEEE-CCEEccCCC
Confidence 35778899999988 5699999999 777765443
No 405
>1s7q_A H-2KB, H-2 class I histocompatibility antigen, K-B alpha chain; LCMV, MHC class I, immune escape, immune system; 1.99A {Mus musculus} SCOP: b.1.1.2 d.19.1.1 PDB: 1s7r_A 1s7s_A 1s7t_A 1bii_A 3qul_A 1s7v_A 1s7w_A 1s7x_A 3quk_A 1s7u_A 1nez_A*
Probab=97.75 E-value=4.8e-05 Score=42.51 Aligned_cols=29 Identities=38% Similarity=0.833 Sum_probs=24.1
Q ss_pred CCCeEEEEeeEee-ecCC-eEEEEeCCCcEEE
Q psy4606 25 EGGTIKLVCKAKG-YPRP-HITWKREDGQEII 54 (69)
Q Consensus 25 ~g~~~~l~C~~~g-~P~P-~~~W~~~~~~~~~ 54 (69)
.+..++|.|.+.| +|.+ .++|.+ +|+.+.
T Consensus 195 ~~~~~~L~C~a~gFyP~~I~v~W~~-~G~~~~ 225 (348)
T 1s7q_A 195 PEDKVTLRCWALGFYPADITLTWQL-NGEELI 225 (348)
T ss_dssp SSSEEEEEEEEEEEBSSCCEEEEEE-TTEECT
T ss_pred CCCcEEEEEEEeeeECCCcEEEEEE-CCEEcc
Confidence 4557999999999 8887 899999 887763
No 406
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=97.74 E-value=2.1e-05 Score=39.72 Aligned_cols=28 Identities=29% Similarity=0.603 Sum_probs=24.3
Q ss_pred ecCCCeEEEEeeEeeecCCeEEEEeCCCcEEE
Q psy4606 23 APEGGTIKLVCKAKGYPRPHITWKREDGQEII 54 (69)
Q Consensus 23 ~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~ 54 (69)
+.+|+.+.|.|.+ |.|.+.|+| +|..+.
T Consensus 119 ~~~G~~v~l~C~~---p~p~i~W~k-~g~~i~ 146 (186)
T 1jbj_A 119 SRGDGSVLLTCGL---TDKTIKWLK-DGSIIS 146 (186)
T ss_dssp CSSSCEEEEECSS---SCSCEEEEE-TTEECC
T ss_pred cCCCCeEEEEeeC---CCCeEEEEE-CCEECc
Confidence 3489999999998 999999999 787764
No 407
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=97.73 E-value=0.00016 Score=38.39 Aligned_cols=28 Identities=32% Similarity=0.732 Sum_probs=24.2
Q ss_pred EEecCCCeEEEEeeEeeecC--CeEEEEeC
Q psy4606 21 IMAPEGGTIKLVCKAKGYPR--PHITWKRE 48 (69)
Q Consensus 21 ~~~~~g~~~~l~C~~~g~P~--P~~~W~~~ 48 (69)
..+.+|+.+.|.|.+.+.|. |.+.|++.
T Consensus 148 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~ 177 (264)
T 2gjj_A 148 EVVKTGASVKISCKASGYSFTGYFINWVKK 177 (264)
T ss_dssp EEECTTCCEEEEEEEESSCGGGSEEEEEEE
T ss_pred EEEcCCCcEEEEEEEeCCccCCeEEEEEEE
Confidence 46889999999999999764 89999984
No 408
>3usa_C HLA class II histocompatibility antigen, DO alpha; MHC class II fold, antigen presentation enzyme and inhibitor system; HET: NAG MAN PGE; 3.20A {Homo sapiens}
Probab=97.73 E-value=6.3e-05 Score=38.67 Aligned_cols=30 Identities=33% Similarity=0.705 Sum_probs=24.4
Q ss_pred cCCCeEEEEeeEee-ecCC-eEEEEeCCCcEEE
Q psy4606 24 PEGGTIKLVCKAKG-YPRP-HITWKREDGQEII 54 (69)
Q Consensus 24 ~~g~~~~l~C~~~g-~P~P-~~~W~~~~~~~~~ 54 (69)
..+...+|.|.+.| +|.. .++|.+ ||+.+.
T Consensus 98 ~~~~~~tL~C~v~gFyP~~i~v~W~~-ng~~v~ 129 (181)
T 3usa_C 98 ELGQPNILICIVDNIFPPVINITWLR-NGQTVT 129 (181)
T ss_dssp CTTSCEEEEEEEEEEBSSCCEEEEEE-TTEECC
T ss_pred CCCCceEEEEEEEEEeCCCCEEEEEE-CCEEcc
Confidence 35677899999999 7765 689999 887764
No 409
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=97.73 E-value=5.6e-05 Score=38.18 Aligned_cols=30 Identities=23% Similarity=0.643 Sum_probs=24.9
Q ss_pred ecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEe
Q psy4606 23 APEGGTIKLVCKAKGYPRPHITWKREDGQEIII 55 (69)
Q Consensus 23 ~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~ 55 (69)
...|+.+.|.|.+.| |.+ +.|+| +|..+..
T Consensus 11 ~~~G~~v~L~C~~~~-~~~-i~W~k-~g~~l~~ 40 (186)
T 1jbj_A 11 SISGTSVELTCPLDS-DEN-LKWEK-NGQELPQ 40 (186)
T ss_dssp EEETTEEEEECSSCC-CTT-CEEEE-TTEEECS
T ss_pred EeCCcEEEEEEeCCC-CCc-eEEEE-CCEECCC
Confidence 467999999999998 544 99999 8887765
No 410
>2h26_A CD1B antigen, T-cell surface glycoprotein CD1B; lipid, endogenous ligand, phosphatidylcholine, MHC, antigen presentation, immune system; HET: NAG FUC 6PL 6UL; 1.80A {Homo sapiens} SCOP: b.1.1.2 d.19.1.1 PDB: 3t8x_A* 1gzq_A* 1gzp_A* 1uqs_A* 3l9r_A*
Probab=97.73 E-value=5.6e-05 Score=41.14 Aligned_cols=28 Identities=43% Similarity=0.990 Sum_probs=23.3
Q ss_pred CCCeEEEEeeEee-ecCC-eEEEEeCCCcEE
Q psy4606 25 EGGTIKLVCKAKG-YPRP-HITWKREDGQEI 53 (69)
Q Consensus 25 ~g~~~~l~C~~~g-~P~P-~~~W~~~~~~~~ 53 (69)
.+..++|.|.|.| +|.. .++|.+ +|+.+
T Consensus 198 ~~~~~~L~C~a~gFyP~~I~v~W~~-~g~~~ 227 (286)
T 2h26_A 198 GPGRLQLVCHVSGFYPKPVWVMWMR-GEQEQ 227 (286)
T ss_dssp STTEEEEEEEEEEEBSSCEEEEEEE-TTEEC
T ss_pred CCCcceEEEEEEEEECCceEEEEEE-CCeEc
Confidence 3567999999999 7877 689999 78765
No 411
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=97.73 E-value=8.7e-05 Score=37.73 Aligned_cols=27 Identities=19% Similarity=0.385 Sum_probs=23.5
Q ss_pred CCeEEEEeeEeeecCCeEEEEeCCCcEE
Q psy4606 26 GGTIKLVCKAKGYPRPHITWKREDGQEI 53 (69)
Q Consensus 26 g~~~~l~C~~~g~P~P~~~W~~~~~~~~ 53 (69)
+..+.|.|.+.|.|.|.+.|++ ++..+
T Consensus 115 ~~~v~L~C~~~~~p~~~~~W~~-~g~~l 141 (182)
T 1hnf_A 115 CINTTLTCEVMNGTDPELNLYQ-DGKHL 141 (182)
T ss_dssp TTTTEEEEECSSCSSCEEEEEE-SSCEE
T ss_pred cCcEEEEeEccCCCCCEEEEEE-CCEEC
Confidence 3479999999999999999999 77776
No 412
>2qrt_A H-2KB, H-2 class I histocompatibility antigen K-B alpha chain, beta-2 microglobulin, ovalbumin-derived...; MHC-I, single chain MHC-I, glycoprotein; 1.80A {Mus musculus} PDB: 2qrs_A 2qri_A
Probab=97.73 E-value=4.1e-05 Score=43.76 Aligned_cols=45 Identities=22% Similarity=0.282 Sum_probs=30.6
Q ss_pred EEcCCEEeecCCCceEEecCCCeEEEEeeEee-ecCC-eEEEEeCCCcEEE
Q psy4606 6 VVVPPDILNEESSSDIMAPEGGTIKLVCKAKG-YPRP-HITWKREDGQEII 54 (69)
Q Consensus 6 V~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~P~P-~~~W~~~~~~~~~ 54 (69)
++.+|.+... +... ...+...+|.|.+.| +|.. .++|.+ ||+.+.
T Consensus 24 l~~~P~v~v~--~~~~-~~~~~~~~L~C~v~gFyP~~I~v~W~k-ng~~~~ 70 (422)
T 2qrt_A 24 IQKTPQIQVY--SRHP-PENGKPNILNCYVTQFHPPHIEIQMLK-NGKKIP 70 (422)
T ss_dssp CCBCCEEEEE--ESSC-CCTTSCEEEEEEEEEEBSSCCEEEEEE-TTEECS
T ss_pred eecCCceEEE--eCCc-ccCCCCeEEEEEEEEEECCCCEEEEEE-CCEECc
Confidence 3456766543 1111 345677999999999 7874 789999 787653
No 413
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=97.72 E-value=1.5e-05 Score=41.14 Aligned_cols=30 Identities=20% Similarity=0.304 Sum_probs=25.1
Q ss_pred eEEecCCCeEEEEee---EeeecCCeEEEEeCCC
Q psy4606 20 DIMAPEGGTIKLVCK---AKGYPRPHITWKREDG 50 (69)
Q Consensus 20 ~~~~~~g~~~~l~C~---~~g~P~P~~~W~~~~~ 50 (69)
.+.+..|+.+.|.|. +.|.|.|.++|+| +|
T Consensus 2 ~Vta~~Ge~v~L~C~~~~v~~~p~~~V~W~k-~g 34 (203)
T 4fa8_A 2 AVTAFLGERVTLTSYWRRVSLGPEIEVSWFK-LG 34 (203)
T ss_dssp CCEEETTCCEEEEEECSSTTCSTTSEEEEEE-EE
T ss_pred CeEEEcCCCEEEEeeeeccCCCCCcEEEEEE-cC
Confidence 356778999999994 5688999999999 44
No 414
>4f7e_A CD1D antigen, D polypeptide; protein-glycolipid complex, MHC-fold, IG-fold, antigen prese TCR, membrane, immune system; HET: 0SH NAG; 2.40A {Bos taurus} PDB: 4f7c_A*
Probab=97.72 E-value=7.1e-05 Score=40.76 Aligned_cols=28 Identities=43% Similarity=0.954 Sum_probs=23.3
Q ss_pred CCCeEEEEeeEee-ecCC-eEEEEeCCCcEE
Q psy4606 25 EGGTIKLVCKAKG-YPRP-HITWKREDGQEI 53 (69)
Q Consensus 25 ~g~~~~l~C~~~g-~P~P-~~~W~~~~~~~~ 53 (69)
.+..+.|.|.|.| +|.+ .++|.+ +|+.+
T Consensus 198 ~~~~~~L~C~a~gFyP~~i~v~W~~-~g~~~ 227 (283)
T 4f7e_A 198 GPGRLLLVCHVSGFYPKPVRVMWMR-GEQEE 227 (283)
T ss_dssp STTEEEEEEEEEEEBSSCEEEEEEE-TTEEC
T ss_pred CCCcEEEEEEECcEEcCceEEEEEE-CCccc
Confidence 3578999999999 8876 689999 78765
No 415
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=97.72 E-value=2.5e-05 Score=40.31 Aligned_cols=37 Identities=8% Similarity=0.311 Sum_probs=23.4
Q ss_pred CEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeC
Q psy4606 10 PDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKRE 48 (69)
Q Consensus 10 p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~ 48 (69)
+.+... +..+.+.+|+.+.|.|.+.|.|.|.+.|++.
T Consensus 24 ~~v~~~--p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~ 60 (233)
T 3bqu_C 24 TTVTQS--PASLSMSIGEKVTIRCITSTDIDDDMNWYQQ 60 (233)
T ss_dssp CCEEEE--CSBC-------CCEEEEEEEEESSCEEEEEE
T ss_pred eeEEEc--CCeEEEecCCCEEEEEecCCcCCCeEEEEEE
Confidence 444443 5556788999999999999999999999983
No 416
>1sq2_N Novel antigen receptor; immunoglobulin fold, protein-protein complex, hydrolase/immune system complex; 1.45A {Ginglymostoma cirratum} SCOP: b.1.1.1 PDB: 1t6v_N
Probab=97.72 E-value=9.7e-05 Score=34.72 Aligned_cols=31 Identities=13% Similarity=0.383 Sum_probs=26.0
Q ss_pred CceEEecCCCeEEEEeeEeeec--CCeEEEEeC
Q psy4606 18 SSDIMAPEGGTIKLVCKAKGYP--RPHITWKRE 48 (69)
Q Consensus 18 ~~~~~~~~g~~~~l~C~~~g~P--~P~~~W~~~ 48 (69)
+..+.+.+|+.++|.|.+.+.+ .+.+.|++.
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~ 39 (113)
T 1sq2_N 7 PRSVTKETGESLTINCVLRDASYALGSTCWYRK 39 (113)
T ss_dssp CSEEEECTTCCEEEEEEECSCSSCCCCEEEEEE
T ss_pred CccEEEecCCCEEEEEEECCCcCCCCEEEEEEe
Confidence 5567788999999999998865 678999984
No 417
>3s6c_A Beta-2-microglobulin, T-cell surface glycoprotein membrane-associated; MHC, immunoglobulin domain, immune system, antigen presentat glycosylation; HET: NAG FUC; 2.90A {Homo sapiens}
Probab=97.71 E-value=2.3e-05 Score=44.39 Aligned_cols=44 Identities=23% Similarity=0.320 Sum_probs=28.7
Q ss_pred EcCCEEeecCCCceEEecCCCeEEEEeeEee-ecCC-eEEEEeCCCcEEE
Q psy4606 7 VVPPDILNEESSSDIMAPEGGTIKLVCKAKG-YPRP-HITWKREDGQEII 54 (69)
Q Consensus 7 ~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~P~P-~~~W~~~~~~~~~ 54 (69)
+.+|.+...+ . . ....+...+|.|.+.| +|.. .++|.+ ||+.+.
T Consensus 2 ~~~P~V~v~~-~-~-~~~~~~~~tL~C~v~~FyP~~i~v~W~~-ng~~~~ 47 (392)
T 3s6c_A 2 QRTPKIQVYS-R-H-PAENGKSNFLNCYVSGFHPSDIEVDLLK-NGERIE 47 (392)
T ss_dssp CBCCCCEEEE-S-S-CCCSSSCEEEEEEEEEEBSSCCEEEEEE-TTEECS
T ss_pred CCCCEEEEEc-C-C-ccccCCcEEEEEEEeeEECCCcEEEEEE-CCeECC
Confidence 4567655421 1 1 1235677899999999 5543 789999 787653
No 418
>3nwm_A Peptide/beta-2microglobulin/MHC class I H-2KD CHI protein; peptide-MHC complex, immunoglobulin fold system; 2.70A {Synthetic}
Probab=97.70 E-value=3.6e-05 Score=44.32 Aligned_cols=45 Identities=20% Similarity=0.250 Sum_probs=30.8
Q ss_pred EEcCCEEeecCCCceEEecCCCeEEEEeeEee-ecCC-eEEEEeCCCcEEE
Q psy4606 6 VVVPPDILNEESSSDIMAPEGGTIKLVCKAKG-YPRP-HITWKREDGQEII 54 (69)
Q Consensus 6 V~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~P~P-~~~W~~~~~~~~~ 54 (69)
|..+|.+...+ . .....+...+|.|.+.| +|.. .++|.+ +|+.+.
T Consensus 27 i~~~P~V~v~~--~-~~~~~~~~~tL~C~v~gFyP~~I~v~W~~-ng~~~~ 73 (443)
T 3nwm_A 27 IQKTPQIQVYS--R-HPPENGKPNILNCYVTQFHPPHIEIQMLK-NGKKIP 73 (443)
T ss_dssp CCBCCEEEEEE--S-SCCCTTSCEEEEEEEEEEBSSCEEEEEEE-TTEECS
T ss_pred eeeCCEEEEEc--C-CcccCCCCEEEEEEEcCeECCceEEEEEE-CCEECC
Confidence 45678776531 1 12234677899999999 6666 789999 787764
No 419
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=97.70 E-value=9.8e-05 Score=38.25 Aligned_cols=31 Identities=26% Similarity=0.591 Sum_probs=26.9
Q ss_pred CceEEecCCCeEEEEeeEee---ecCCeEEEEeC
Q psy4606 18 SSDIMAPEGGTIKLVCKAKG---YPRPHITWKRE 48 (69)
Q Consensus 18 ~~~~~~~~g~~~~l~C~~~g---~P~P~~~W~~~ 48 (69)
+..+.+.+|+.+.|.|.+.| .|.|.+.|++.
T Consensus 9 ~~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~ 42 (250)
T 2fbo_J 9 HTEVEVHAGGTVELPCSYQLANDTQPPVISWLKG 42 (250)
T ss_dssp CSEEEECTTSCEEECCEEEECSCCSCCEEEEEEE
T ss_pred CCceEEecCCeEEEEEEeEcCCCCCceEEEEEeC
Confidence 44567789999999999998 89999999993
No 420
>4gup_A Major histocompatibility complex class I-related protein; MHC class I-related protein, immune system; HET: 6FP; 3.20A {Homo sapiens}
Probab=97.70 E-value=3.7e-05 Score=41.70 Aligned_cols=43 Identities=33% Similarity=0.779 Sum_probs=29.3
Q ss_pred CCeEEEEeeEee-ecCC-eEEEEeCCCcEEEecCC-cEEEeCCCCCC
Q psy4606 26 GGTIKLVCKAKG-YPRP-HITWKREDGQEIIIKEG-NTMVPKSKDIF 69 (69)
Q Consensus 26 g~~~~l~C~~~g-~P~P-~~~W~~~~~~~~~~~~~-~~~~~~~~~l~ 69 (69)
...++|.|.|.| +|.. .++|.+ ||+.+..+.. ..++.+++|+|
T Consensus 194 ~~~~~l~C~~~gFyP~~i~v~W~~-~g~~~~~~~~~~~~~pn~Dgt~ 239 (271)
T 4gup_A 194 PGVTALFCKAHGFYPPEIYMTWMK-NGEEIVQEIDYGDILPSGDGTY 239 (271)
T ss_dssp TTEEEEEEEEEEEBSSCCEEEEEE-TTEECTTTEEECCCEECSSSCE
T ss_pred CCcceeEEEEEEEECCceEEEEEE-CCEEecCCceeCCcEECCCCCE
Confidence 457899999999 8876 689999 8877643211 12455556654
No 421
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=97.70 E-value=7.8e-05 Score=39.07 Aligned_cols=38 Identities=8% Similarity=0.182 Sum_probs=30.3
Q ss_pred CCEEeecCCCceEEecCCCeEEEEeeEeeec-----CCeEEEEeC
Q psy4606 9 PPDILNEESSSDIMAPEGGTIKLVCKAKGYP-----RPHITWKRE 48 (69)
Q Consensus 9 ~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P-----~P~~~W~~~ 48 (69)
.+.+... +..+.+.+|+.+.|.|.+.|.| .|.+.|++.
T Consensus 34 ~~~v~~~--p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~ 76 (252)
T 3bkj_L 34 DVLMTQT--PLSLPVNLGEQASISCRSSQSIVHSNGHTYLEWYLQ 76 (252)
T ss_dssp CCCEEEE--CSEEEECTTSCEEEEEEESSCCBCTTSCBCEEEEEE
T ss_pred ccEEEeC--CceEEEeCCCcEEEEEEcCCCccccCCCCcEEEEEE
Confidence 3444444 5567788999999999999987 699999984
No 422
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=97.69 E-value=5.3e-05 Score=38.90 Aligned_cols=27 Identities=41% Similarity=0.752 Sum_probs=23.8
Q ss_pred cCCCeEEEEeeEeeecCCeEEEEeCCCcEEE
Q psy4606 24 PEGGTIKLVCKAKGYPRPHITWKREDGQEII 54 (69)
Q Consensus 24 ~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~ 54 (69)
.+|+.+.|.|.+ |.|.+.|+| +|..+.
T Consensus 16 ~~G~~v~L~C~~---p~~~i~W~k-~g~~l~ 42 (204)
T 1sy6_A 16 QEDGSVLLTCDA---EAKNITWFK-DGKMIG 42 (204)
T ss_dssp CSSSEEEEEECS---CSSEEEEEE-TTEEEE
T ss_pred cCCCeEEEEEcC---CCCEEEEEE-CCEECC
Confidence 579999999998 899999999 787775
No 423
>3moq_A NEW antigen receptor variable domain, P3(40) PEPT amyloid beta A4 protein; AB-ignar, AB-12Y-2, glycoprotein, membran protease inhibitor; 2.05A {Orectolobus maculatus} PDB: 2z8w_C 2z8v_C 1ves_A 1ver_A
Probab=97.68 E-value=0.0002 Score=34.55 Aligned_cols=31 Identities=13% Similarity=0.323 Sum_probs=26.2
Q ss_pred CceEEecCCCeEEEEeeEeee--cCCeEEEEeC
Q psy4606 18 SSDIMAPEGGTIKLVCKAKGY--PRPHITWKRE 48 (69)
Q Consensus 18 ~~~~~~~~g~~~~l~C~~~g~--P~P~~~W~~~ 48 (69)
+..+.+.+|+.++|.|...+. +.+.+.|++.
T Consensus 7 p~~v~v~~G~svtL~C~~s~~~~~~~~v~Wyrq 39 (126)
T 3moq_A 7 PRTATKETGESLTINCVLRDASFELKDTGWYRT 39 (126)
T ss_dssp CSEEEEETTCCEEEEEEEESCSSCCCEEEEEEE
T ss_pred CceEEEeCCCCEEEEEEeecCccCCceEEEEEe
Confidence 566788899999999999875 6778999983
No 424
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=97.68 E-value=9e-05 Score=39.25 Aligned_cols=30 Identities=27% Similarity=0.685 Sum_probs=25.1
Q ss_pred ceEEecCCCeEEEEeeEeeec--CCeEEEEeC
Q psy4606 19 SDIMAPEGGTIKLVCKAKGYP--RPHITWKRE 48 (69)
Q Consensus 19 ~~~~~~~g~~~~l~C~~~g~P--~P~~~W~~~ 48 (69)
....+.+|+.++|.|.+.|.| .|.+.|++.
T Consensus 159 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~ 190 (268)
T 1x9q_A 159 GGGLVQPGGAMKLSCVTSGFTFGHYWMNWVRQ 190 (268)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGCEEEEEEE
T ss_pred CceEecCCCcEEEEEEecCccccccEEEEEEe
Confidence 346788999999999999865 389999983
No 425
>1k5n_A Major histocompatibility complex molecule HLA-B*2; MHC(major histocompatibility complex), HLA(human leukocyte A immune system; 1.09A {Homo sapiens} SCOP: b.1.1.2 d.19.1.1 PDB: 1jgd_A 1of2_A 1uxw_A 1w0w_A 3b3i_A* 3bp7_A 3czf_A* 3hcv_A* 3d18_A* 2bss_A 2bsr_A 2a83_A 1jge_A 1hsa_A 1uxs_A 1w0v_A 1ogt_A 2bst_A 3b6s_A* 3bp4_A ...
Probab=97.68 E-value=8.7e-05 Score=40.16 Aligned_cols=41 Identities=32% Similarity=0.602 Sum_probs=28.4
Q ss_pred cCCEEeecCCCceEEecCCCeEEEEeeEee-ecCC-eEEEEeCCCcEEE
Q psy4606 8 VPPDILNEESSSDIMAPEGGTIKLVCKAKG-YPRP-HITWKREDGQEII 54 (69)
Q Consensus 8 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~P~P-~~~W~~~~~~~~~ 54 (69)
++|.+... ... . .+..++|.|.|.| +|.. .++|.+ +|+.+.
T Consensus 183 ~~P~v~v~--~~~--~-~~~~~~L~C~~~gFyP~~i~v~W~~-~g~~~~ 225 (276)
T 1k5n_A 183 DPPKTHVT--HHP--I-SDHEATLRCWALGFYPAEITLTWQR-DGEDQT 225 (276)
T ss_dssp BCCEEEEE--EEE--E-ETTEEEEEEEEEEEBSSCCEEEEEE-TTEECG
T ss_pred cCceeEEE--cCC--C-CCCceeEEEEEeCeECCcEEEEEEE-CCEEcc
Confidence 56766543 211 1 3568999999999 5654 789999 887764
No 426
>3d2u_A UL18 protein; MHC class I homolog, disease mutation, glycation, glycoprote immune response, immunoglobulin domain, MHC I, pyrrolidone carboxylic acid; HET: NAG MAN BMA FUC; 2.21A {Human herpesvirus 5}
Probab=97.68 E-value=9.4e-05 Score=40.26 Aligned_cols=28 Identities=21% Similarity=0.527 Sum_probs=23.3
Q ss_pred CCeEEEEeeEee-ecCC-eEEEEeCCCcEEE
Q psy4606 26 GGTIKLVCKAKG-YPRP-HITWKREDGQEII 54 (69)
Q Consensus 26 g~~~~l~C~~~g-~P~P-~~~W~~~~~~~~~ 54 (69)
+..+.|.|.|.| +|.+ .++|.+ +|+.+.
T Consensus 202 ~~~~~L~C~a~gFyP~~I~v~W~~-nG~~~~ 231 (281)
T 3d2u_A 202 DNRAEAFCTSYGFFPGEIQITFIH-YGDKVP 231 (281)
T ss_dssp TTEEEEEEEEEEEBSSCCEEEEEE-ESSCCC
T ss_pred cCcceEEEEEeceECCceEEEEEE-CCEEcc
Confidence 568999999999 8876 689999 787764
No 427
>1nez_G T-cell surface glycoprotein CD8 alpha chain; immune system; HET: NAG; 2.10A {Synthetic} SCOP: b.1.1.1 PDB: 1bqh_G* 3b9k_A* 2atp_A* 2arj_R
Probab=97.68 E-value=0.00017 Score=34.78 Aligned_cols=38 Identities=21% Similarity=0.384 Sum_probs=30.3
Q ss_pred CCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeC
Q psy4606 9 PPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKRE 48 (69)
Q Consensus 9 ~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~ 48 (69)
++.+... +..+.+.+|+.++|.|.+.+...+.+.|++.
T Consensus 4 ~~~v~Q~--p~~~~v~~G~~vtL~C~~s~~~~~~v~WyrQ 41 (128)
T 1nez_G 4 APELRIF--PKKMDAELGQKVDLVCEVLGSVSQGCSWLFQ 41 (128)
T ss_dssp CCEEEEE--SSCEEECTTCCEEEEEEEESCCSSCEEEEEE
T ss_pred CCeeEEC--CCeEEEcCCCCEEEEEEeCccCCCcEEEEEe
Confidence 4556555 6667889999999999998766688999983
No 428
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=97.67 E-value=0.00017 Score=38.10 Aligned_cols=46 Identities=13% Similarity=0.204 Sum_probs=32.7
Q ss_pred eEEEEc---CCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEE
Q psy4606 3 YLDVVV---PPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEI 53 (69)
Q Consensus 3 ~l~V~~---~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~ 53 (69)
.|.|.. +|.+... + ...+.+|+.++|.|.+.+. .+.+.|+| +|..+
T Consensus 93 ~L~V~~~~~~P~i~~~--p-~~~v~~G~~vtL~C~~~~~-~~~~~w~k-~g~~~ 141 (242)
T 1p6f_A 93 DLVVTEMYDTPTLSVH--P-GPEVISGEKVTFYCRLDTA-TSMFLLLK-EGRSS 141 (242)
T ss_dssp EEEEECCSCCCEEEEE--S-CSEEETTCEEEEEEECTTS-CSEEEEEE-CSSSC
T ss_pred EEEeecccCCCceEcc--C-CCccCCCCcEEEEEecCCC-CCEEEEEE-CCCcc
Confidence 456653 5666654 3 2356789999999999764 56999999 66544
No 429
>2yc1_B Single chain antibody fragment 9004G; immune system-toxin complex, scorpion toxin; 1.90A {Homo sapiens} PDB: 2ybr_B 3lh2_L 3h3p_L 3lhp_L
Probab=97.67 E-value=0.00013 Score=36.12 Aligned_cols=37 Identities=16% Similarity=0.373 Sum_probs=29.7
Q ss_pred CEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeC
Q psy4606 10 PDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKRE 48 (69)
Q Consensus 10 p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~ 48 (69)
+.+... +..+.+.+|+.++|.|...+.+.+.+.|++.
T Consensus 17 ~~v~q~--p~~v~v~~G~sVtL~C~~s~~~~~~v~Wyrq 53 (146)
T 2yc1_B 17 IVLTQS--PATLSVSPGERATLSCRASQSVRSYLAWYQQ 53 (146)
T ss_dssp CCEEEE--CSEEEECTTSCEEEEEEESSCCTTCEEEEEE
T ss_pred ceEEEe--CCEEEEecCCCEEEEEEECCCCCCEEEEEEE
Confidence 344444 5567888999999999998888889999984
No 430
>2ptt_A CD48 antigen; CD244, CD48, NK cell receptor, X-RAY, immune system; 1.63A {Mus musculus} PDB: 2ptv_A
Probab=97.67 E-value=7.4e-05 Score=34.72 Aligned_cols=34 Identities=29% Similarity=0.350 Sum_probs=27.4
Q ss_pred CceEEecCCCeEEEEeeE-eeecCCeEEEEeCCCc
Q psy4606 18 SSDIMAPEGGTIKLVCKA-KGYPRPHITWKREDGQ 51 (69)
Q Consensus 18 ~~~~~~~~g~~~~l~C~~-~g~P~P~~~W~~~~~~ 51 (69)
...+.+..|+.++|.|.. .+.+.+.+.|++..+.
T Consensus 10 ~~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~ 44 (110)
T 2ptt_A 10 IPDINAYTGSNVTLKIHKDPLGPYRRITWLHTKNQ 44 (110)
T ss_dssp CCSEEEETTSCEEECSCSSCCCSCSEEEEEESTTB
T ss_pred CCCEEEecCCcEEEeCCccCCCCcCEEEEEecCCc
Confidence 334678899999999998 6788899999994444
No 431
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=97.67 E-value=5.6e-05 Score=38.74 Aligned_cols=35 Identities=9% Similarity=0.151 Sum_probs=28.4
Q ss_pred CceEEecCC--CeEEEEeeEeeecCCeEEEEeC--CCcEE
Q psy4606 18 SSDIMAPEG--GTIKLVCKAKGYPRPHITWKRE--DGQEI 53 (69)
Q Consensus 18 ~~~~~~~~g--~~~~l~C~~~g~P~P~~~W~~~--~~~~~ 53 (69)
+..+.+.+| +.+.|.|.+.+ |.|.++|++. ++..+
T Consensus 14 p~~v~v~eG~~~~v~L~C~~~~-p~~~v~w~~~~~~g~~~ 52 (213)
T 2x1w_L 14 HGVVYITENKNKTVVIPCLGSI-SNLNVSLCARYPEKRFV 52 (213)
T ss_dssp CEEEEECCSTTCEEEECCCBSS-TTCCEEEEEETTTEEEC
T ss_pred ceEEEEecCCCccEEEeeccCC-CCcEEEEEhhcCCCccc
Confidence 467788899 99999999987 8899999883 35444
No 432
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=97.67 E-value=5.4e-05 Score=39.24 Aligned_cols=31 Identities=13% Similarity=0.360 Sum_probs=27.1
Q ss_pred CceEEecCCCeEEEEeeEeeec----CCeEEEEeC
Q psy4606 18 SSDIMAPEGGTIKLVCKAKGYP----RPHITWKRE 48 (69)
Q Consensus 18 ~~~~~~~~g~~~~l~C~~~g~P----~P~~~W~~~ 48 (69)
+..+.+.+|+.+.|.|.+.|.| .|.+.|++.
T Consensus 8 p~~~~v~~G~~v~L~C~~~~~~~~~~~~~i~W~k~ 42 (240)
T 1moe_A 8 PASLAVSLGQRATMSCRAGESVDIFGVGFLHWYQQ 42 (240)
T ss_dssp CSEEEECTTSCEEEEEEESSCCEETTEECEEEEEE
T ss_pred CCeEEecCCCCEEEEEeCCCccccCCCceEEEEEE
Confidence 5567788999999999999988 889999984
No 433
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=97.67 E-value=2.8e-05 Score=46.68 Aligned_cols=35 Identities=23% Similarity=0.403 Sum_probs=29.4
Q ss_pred ceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEEe
Q psy4606 19 SDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIII 55 (69)
Q Consensus 19 ~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~~ 55 (69)
..+.+..|+.+.|.|.+.| |.|.+.|++ ++..+..
T Consensus 541 ~~v~v~~g~~~~L~C~~~s-p~a~v~W~~-~~~~l~~ 575 (663)
T 1olz_A 541 RQHFFKHGGTAELKCSQKS-NLARVFWKF-QNGVLKA 575 (663)
T ss_dssp EEEEEETTSCEEECCCCSC-TTCEEEEEE-SSSBCCC
T ss_pred eEEEEecCCcEEEEccCCC-CCCcEEEEE-CCeeccc
Confidence 4567889999999999999 999999999 6665543
No 434
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=97.66 E-value=9e-05 Score=42.78 Aligned_cols=45 Identities=16% Similarity=0.192 Sum_probs=29.8
Q ss_pred cCCEEeecCCCceEEecCCCeEEEEeeEeee-cC-CeEEEEeCCCcEEE
Q psy4606 8 VPPDILNEESSSDIMAPEGGTIKLVCKAKGY-PR-PHITWKREDGQEII 54 (69)
Q Consensus 8 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~-P~-P~~~W~~~~~~~~~ 54 (69)
.+|.+...+ +....+..|..+.|.|.+.|. |. ..++|++ +|+.+.
T Consensus 295 ~~p~v~~~~-p~~~~~~~g~~~~L~C~v~g~~P~~~~i~W~k-~g~~~~ 341 (512)
T 1zvo_C 295 QPLGVYLLT-PAVQDLWLRDKATFTCFVVGSDLKDAHLTWEV-AGKVPT 341 (512)
T ss_pred CCCEEEEEC-CChHHhccCCceEEEEEEeceECCCeEEEEEE-CCEecc
Confidence 355554331 332335579999999999995 43 3899999 666543
No 435
>3m17_A IGG receptor FCRN large subunit P51; immunoglobulin binding protein, cell membrane, disulfide BON glycoprotein, IGG-binding protein, immunoglobulin domain; 2.60A {Homo sapiens} PDB: 1exu_A 3m1b_A
Probab=97.66 E-value=0.00032 Score=37.80 Aligned_cols=42 Identities=26% Similarity=0.419 Sum_probs=29.6
Q ss_pred CCeEEEEeeEee-ecCC-eEEEEeCCCcEEEecCCcEEEeCCCCCC
Q psy4606 26 GGTIKLVCKAKG-YPRP-HITWKREDGQEIIIKEGNTMVPKSKDIF 69 (69)
Q Consensus 26 g~~~~l~C~~~g-~P~P-~~~W~~~~~~~~~~~~~~~~~~~~~~l~ 69 (69)
...+.|.|.+.| +|.+ .++|.+ +|+.+... ...+..+.+++|
T Consensus 191 ~~~~~L~C~~~gFyP~~i~v~W~~-~g~~~~~~-~~~~~p~~dgtf 234 (267)
T 3m17_A 191 PGFSVLTCSAFSFYPPELQLRFLR-NGLAAGTG-QGDFGPNSDGSF 234 (267)
T ss_dssp TTEEEEEEEEEEEBSSCCEEEEEE-TTEEEECC-CCEEEECTTSCE
T ss_pred CCCceEEEEEcceEcceEEEEEEE-CCEeCccc-cccceeCCCCCE
Confidence 458999999999 7875 789999 78776432 234555555544
No 436
>1h5b_A Murine T cell receptor (TCR) valpha domain; immune response, immunoglobulin fold; 1.85A {Mus musculus} SCOP: b.1.1.1 PDB: 1h5b_C 1h5b_B
Probab=97.66 E-value=0.00014 Score=33.97 Aligned_cols=30 Identities=23% Similarity=0.382 Sum_probs=25.1
Q ss_pred CceEEecCCCeEEEEeeEeeecCCeEEEEeC
Q psy4606 18 SSDIMAPEGGTIKLVCKAKGYPRPHITWKRE 48 (69)
Q Consensus 18 ~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~ 48 (69)
+..+.+.+|+.+.|.|.+.+.+ +.+.|++.
T Consensus 8 p~~~~v~~G~~v~L~C~~~~~~-~~v~W~r~ 37 (113)
T 1h5b_A 8 PSALSLHEGTDSALRCNFTTTM-RSVQWFRQ 37 (113)
T ss_dssp CSEEEEETTCCEEEEEEESSCC-SEEEEEEE
T ss_pred CCEEEEecCCcEEEEEEECCCC-ceEEEEEE
Confidence 5556788999999999998855 78999984
No 437
>2coq_A NEW antigen receptor variable domain; IG VNAR, natural TYPE2, immune system; 2.10A {Orectolobus maculatus}
Probab=97.65 E-value=8.6e-05 Score=34.54 Aligned_cols=31 Identities=13% Similarity=0.304 Sum_probs=25.6
Q ss_pred CceEEecCCCeEEEEeeEeee--cCCeEEEEeC
Q psy4606 18 SSDIMAPEGGTIKLVCKAKGY--PRPHITWKRE 48 (69)
Q Consensus 18 ~~~~~~~~g~~~~l~C~~~g~--P~P~~~W~~~ 48 (69)
+..+.+.+|+.++|.|.+.+. +.+.+.|++.
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~ 39 (108)
T 2coq_A 7 PRIATKETGESLTINCVLRDTACALDSTNWYRT 39 (108)
T ss_dssp CSEEEECTTCCEEEEEEECCSSEEEEEEEEEEE
T ss_pred CceEEEcCCCCEEEEeEeCCCcCCCCEEEEEEc
Confidence 556778899999999999875 4678999984
No 438
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=97.65 E-value=6.2e-05 Score=37.76 Aligned_cols=33 Identities=15% Similarity=0.225 Sum_probs=25.3
Q ss_pred eEEecCCCeEEEEeeEee--ecCCeEEEEeCCCcEE
Q psy4606 20 DIMAPEGGTIKLVCKAKG--YPRPHITWKREDGQEI 53 (69)
Q Consensus 20 ~~~~~~g~~~~l~C~~~g--~P~P~~~W~~~~~~~~ 53 (69)
.+.+.+|+.+.|.|.+.+ .|.|.+.|+| ++..+
T Consensus 5 ~v~~~~G~~v~L~c~~~~~~~~~~~i~W~k-~~~~i 39 (176)
T 1hng_A 5 TVWGALGHGINLNIPNFQMTDDIDEVRWER-GSTLV 39 (176)
T ss_dssp EEEEETTSCEEECCTTCCCCTTEEEEEEEE-TTEEE
T ss_pred EEEEEcCCcEEEcCCCCCcccccccEEEEe-CCcee
Confidence 466789999999996544 6678999999 66443
No 439
>2yz1_A Tyrosine-protein phosphatase non-receptor type substrate 1; beta-sandwich, structural genomics, NPPSFA; 1.40A {Mus musculus}
Probab=97.64 E-value=0.00011 Score=34.59 Aligned_cols=32 Identities=22% Similarity=0.434 Sum_probs=27.0
Q ss_pred CceEEecCCCeEEEEeeEeee-cCCeEEEEeCC
Q psy4606 18 SSDIMAPEGGTIKLVCKAKGY-PRPHITWKRED 49 (69)
Q Consensus 18 ~~~~~~~~g~~~~l~C~~~g~-P~P~~~W~~~~ 49 (69)
+..+.+.+|+.++|.|.+.+. |.+.+.|++.+
T Consensus 14 p~~~~~~~G~~v~L~C~~~~~~~~~~v~W~r~~ 46 (120)
T 2yz1_A 14 EKSVSVAAGDSTVLNCTLTSLLPVGPIKWYRGV 46 (120)
T ss_dssp SSEEEECTTCCEEECCEESCCCSCCCEEEEESS
T ss_pred CceEEEeCCCCEEEEeEECCCCCCcEEEEEcCC
Confidence 556788899999999999874 77899999953
No 440
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=97.64 E-value=7.2e-05 Score=38.26 Aligned_cols=30 Identities=20% Similarity=0.263 Sum_probs=24.3
Q ss_pred ecCCCeEEEEeeEeeec---C-CeEEEEeCCCcEE
Q psy4606 23 APEGGTIKLVCKAKGYP---R-PHITWKREDGQEI 53 (69)
Q Consensus 23 ~~~g~~~~l~C~~~g~P---~-P~~~W~~~~~~~~ 53 (69)
+..|+.+.|.|.+.|.| . +.+.|++ ++..+
T Consensus 15 v~~G~~v~L~C~~~g~~~~p~~~~v~W~k-~~~~~ 48 (207)
T 2vol_A 15 LTITLTPKVTCVVVDISKDDPEVQFSWFV-DDVEV 48 (207)
T ss_dssp HSTTSCCEEEEEEEEECTTCCCCEEEEEE-TTEEE
T ss_pred hccCCceEEEEEEeCcccCCCceEEEEEE-CCccc
Confidence 67899999999999985 3 4899999 55544
No 441
>4aen_A HLA class II histocompatibility antigen, DR alpha; immune system, SELF antigen, invariant chain, CLIP; 2.20A {Homo sapiens}
Probab=97.64 E-value=4.6e-05 Score=39.89 Aligned_cols=46 Identities=22% Similarity=0.395 Sum_probs=30.4
Q ss_pred EEEcCCEEeecCCCceEEecCCCeEEEEeeEee-ecCC-eEEEEeCCCcEEE
Q psy4606 5 DVVVPPDILNEESSSDIMAPEGGTIKLVCKAKG-YPRP-HITWKREDGQEII 54 (69)
Q Consensus 5 ~V~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~P~P-~~~W~~~~~~~~~ 54 (69)
....+|.+...+ .. ....+...+|.|.+.| +|.. .++|.+ +|+.+.
T Consensus 97 ~~~~~P~V~v~~--~~-~~~~~~~~tL~C~a~gFyP~~I~v~W~k-nG~~~~ 144 (207)
T 4aen_A 97 ITNVPPEVTVLT--NS-PVELREPNVLICFIDKFTPPVVNVTWLR-NGKPVT 144 (207)
T ss_dssp CCCBCCEEEEEE--SS-CCCTTSCEEEEEEEEEEBSSCCEEEEEE-TTEECC
T ss_pred ccCCCCeEEEEc--CC-cccccCceeEEEEEeeecCeeEEEEEEE-CCEECc
Confidence 344677665431 11 1123567899999999 7764 789999 787664
No 442
>1mhc_A MHC class I antigen H2-M3; histocompatibility antigen/peptide, histocompatibility antig peptide complex; HET: FME NAG; 2.10A {Mus musculus} SCOP: b.1.1.2 d.19.1.1
Probab=97.62 E-value=9.7e-05 Score=40.12 Aligned_cols=29 Identities=34% Similarity=0.840 Sum_probs=23.7
Q ss_pred CCCeEEEEeeEee-ecCC-eEEEEeCCCcEEE
Q psy4606 25 EGGTIKLVCKAKG-YPRP-HITWKREDGQEII 54 (69)
Q Consensus 25 ~g~~~~l~C~~~g-~P~P-~~~W~~~~~~~~~ 54 (69)
.+..++|.|.|.| +|.. .++|.+ +|+.+.
T Consensus 195 ~~~~~~L~C~~~gFyP~~i~v~W~~-~g~~~~ 225 (282)
T 1mhc_A 195 PKGDVTLRCWALGFYPADITLTWQK-DEEDLT 225 (282)
T ss_dssp TTSCEEEEEEEEEEBSSCCEEEEEE-TTEECT
T ss_pred CCCceeEEEEEccEECCcEEEEEEE-CCEecc
Confidence 4667999999999 8875 689999 787753
No 443
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=97.62 E-value=0.00012 Score=38.23 Aligned_cols=31 Identities=10% Similarity=0.258 Sum_probs=27.0
Q ss_pred CceEEecCCCeEEEEeeEeeec-----CCeEEEEeC
Q psy4606 18 SSDIMAPEGGTIKLVCKAKGYP-----RPHITWKRE 48 (69)
Q Consensus 18 ~~~~~~~~g~~~~l~C~~~g~P-----~P~~~W~~~ 48 (69)
+..+.+.+|+.+.|.|.+.|.| .|.+.|++.
T Consensus 8 p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~ 43 (247)
T 1svz_A 8 PLYLPVSLGDQASISCRSSQTIVHNNGNTYLEWYLQ 43 (247)
T ss_dssp CSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEE
T ss_pred CCeEEecCCCCEEEEEeCCCcccccCCCceEEEEEE
Confidence 5567788999999999999988 799999983
No 444
>1zs8_A Histocompatibility 2, M region locus 10.5; major histocompatibility complex, MHC, vomeronasal organ, VN receptors, pheromone receptors, pepti immune system; HET: NAG; 3.00A {Mus musculus} SCOP: b.1.1.2 d.19.1.1
Probab=97.61 E-value=7.3e-05 Score=40.43 Aligned_cols=29 Identities=45% Similarity=0.896 Sum_probs=21.1
Q ss_pred CCCeEEEEeeEee-ecCC-eEEEEeCCCcEEE
Q psy4606 25 EGGTIKLVCKAKG-YPRP-HITWKREDGQEII 54 (69)
Q Consensus 25 ~g~~~~l~C~~~g-~P~P-~~~W~~~~~~~~~ 54 (69)
.+..+.|.|.|.| +|.. .++|.+ +|+.+.
T Consensus 194 ~~~~~~L~C~~~gFyP~~i~v~W~~-~g~~~~ 224 (274)
T 1zs8_A 194 PEGNVTLRCWALGFYPADITLTWKR-DGKNHT 224 (274)
T ss_dssp ----CEEEEEEEEEBSSCCEEEEEE-TTEECC
T ss_pred CCCceEEEEEEeceECCCeEEEEEE-CCcccC
Confidence 3567899999999 7875 689999 887763
No 445
>1u58_A MHC-I homolog M144; MCMV, MHC-I homolog, immune system; 1.90A {Murid herpesvirus 1} SCOP: b.1.1.2 d.19.1.1 PDB: 1pqz_A
Probab=97.61 E-value=0.00016 Score=38.83 Aligned_cols=43 Identities=23% Similarity=0.594 Sum_probs=29.3
Q ss_pred CCeEEEEeeEee-ecCC-eEEEEeCCCc---EEEec-C-CcEEEeCCCCCC
Q psy4606 26 GGTIKLVCKAKG-YPRP-HITWKREDGQ---EIIIK-E-GNTMVPKSKDIF 69 (69)
Q Consensus 26 g~~~~l~C~~~g-~P~P-~~~W~~~~~~---~~~~~-~-~~~~~~~~~~l~ 69 (69)
+..+.|.|.|.| +|.. .++|.+ ||+ .+..+ . ...+..+.+++|
T Consensus 158 ~~~~~L~C~a~gFyP~~I~v~W~~-ng~~~~~~~~~~~~~~~~~pn~Dgty 207 (253)
T 1u58_A 158 EGGMRLRCFARDYYPADLEIRWWK-DDGGGGALPQTSKQHHDPLPSGNGLY 207 (253)
T ss_dssp SSCEEEEEEEEEEBSSCEEEEEEE-ECSSSCEEECCCSCCCCCEECSSSCE
T ss_pred CCcccEEEEEeeEeCCccEEEEEE-CCcccccccCCceeecceEeCCCCCE
Confidence 478999999999 8876 588999 788 65433 1 223445555543
No 446
>4ah2_B HLA class II histocompatibility antigen gamma CHA class II histocompatibility antigen\,DRB1-1...; MHC II, immune system, SELF antigen; 2.36A {Homo sapiens}
Probab=97.60 E-value=0.00012 Score=38.84 Aligned_cols=28 Identities=39% Similarity=0.740 Sum_probs=22.5
Q ss_pred CCeEEEEeeEee-ecCC-eEEEEeCCCcEEE
Q psy4606 26 GGTIKLVCKAKG-YPRP-HITWKREDGQEII 54 (69)
Q Consensus 26 g~~~~l~C~~~g-~P~P-~~~W~~~~~~~~~ 54 (69)
+...+|.|.+.| +|.. .++|.+ +|+.+.
T Consensus 141 ~~~~tL~C~a~gFyP~~I~v~W~~-~g~~~~ 170 (229)
T 4ah2_B 141 QHHNLLVCSVSGFYPGSIEVRWFR-NGQEEK 170 (229)
T ss_dssp -CCEEEEEEEEEEBSSCCEEEEEE-TTEECC
T ss_pred CCCceeEEEEccEeCCCEEEEEEE-CCEEcc
Confidence 456899999999 8887 799999 776653
No 447
>2jju_A Signal regulatory protein beta-1; immunoglobulin domain, immunoglobulin superfamily, immune system, transmembrane, paired receptor; 1.19A {Homo sapiens} PDB: 2jjv_A 2uv3_A* 2jjt_A* 2jjs_A* 2jjw_A
Probab=97.60 E-value=0.0001 Score=35.23 Aligned_cols=32 Identities=22% Similarity=0.451 Sum_probs=26.8
Q ss_pred CceEEecCCCeEEEEeeEeee-cCCeEEEEeCC
Q psy4606 18 SSDIMAPEGGTIKLVCKAKGY-PRPHITWKRED 49 (69)
Q Consensus 18 ~~~~~~~~g~~~~l~C~~~g~-P~P~~~W~~~~ 49 (69)
+..+.+.+|+.++|.|.+.+. |.+.+.|++..
T Consensus 10 p~~~~v~~G~~vtL~C~~~~~~~~~~v~W~r~~ 42 (127)
T 2jju_A 10 EKSVSVAAGESATLRCAMTSLIPVGPIMWFRGA 42 (127)
T ss_dssp CSEEEEETTSCEEECCEESCCCSCCCEEEEECS
T ss_pred CCeEEEeCCCCEEEEEEEeCCCCCCEEEEEecC
Confidence 456778899999999999875 77899999943
No 448
>3bev_A Major histocompatibility complex class I glycoprotein haplotype B21; MHC class I, chicken, BF21, 11MER, peptide, bulge, water cushion, immune response, immunoglobulin domain, MHC I; 2.10A {Gallus gallus} PDB: 3bew_A
Probab=97.59 E-value=0.00018 Score=38.95 Aligned_cols=42 Identities=33% Similarity=0.729 Sum_probs=27.9
Q ss_pred CCeEEEEeeEee-ecCC-eEEEEeCCCcEEEecCC-cEEEeCCCCCC
Q psy4606 26 GGTIKLVCKAKG-YPRP-HITWKREDGQEIIIKEG-NTMVPKSKDIF 69 (69)
Q Consensus 26 g~~~~l~C~~~g-~P~P-~~~W~~~~~~~~~~~~~-~~~~~~~~~l~ 69 (69)
+.. .|.|.|.| +|.+ .++|.+ +|+.+..+.. ..+..+.+++|
T Consensus 193 ~~~-~L~C~a~gFyP~~i~v~W~~-~g~~~~~~~~~~~~~p~~Dgtf 237 (274)
T 3bev_A 193 GIL-TLSCRAHGFYPRPIVVSWLK-DGAVRGQDAQSGGIVPNGDGTY 237 (274)
T ss_dssp TCS-EEEEEEEEEBSSCCEEEEEE-TTEEECTTEEEEEEEECTTSCE
T ss_pred Ccc-EEEEEEeeeeCCceEEEEEE-CCcccCCceeecceEECCCCCE
Confidence 345 99999999 6776 789999 8877643221 23445555543
No 449
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=97.59 E-value=0.00014 Score=37.81 Aligned_cols=28 Identities=25% Similarity=0.631 Sum_probs=24.8
Q ss_pred eEEecCCCeEEEEeeEeeec--CCeEEEEe
Q psy4606 20 DIMAPEGGTIKLVCKAKGYP--RPHITWKR 47 (69)
Q Consensus 20 ~~~~~~g~~~~l~C~~~g~P--~P~~~W~~ 47 (69)
...+.+|+.+.|.|.+.|.| .|.+.|++
T Consensus 11 ~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k 40 (247)
T 2ghw_B 11 GGVVQPGKSLRLSCAASGFAFSSYAMHWVR 40 (247)
T ss_dssp CEEECTTCCEEEEEEEESSCGGGSCEEEEE
T ss_pred CEEEecCCcEEEEEEeccccCCCceEEEEE
Confidence 46778999999999999987 68899998
No 450
>1r3h_A MHC H2-TL-T10-129; class IB MHC, gammadelta T cell ligand, immune system; 2.50A {Mus musculus} SCOP: b.1.1.2 d.19.1.1 PDB: 1c16_A 1ypz_A*
Probab=97.59 E-value=9.4e-05 Score=39.72 Aligned_cols=41 Identities=34% Similarity=0.725 Sum_probs=28.3
Q ss_pred cCCEEeecCCCceEEecCCCeEEEEeeEee-ecCC-eEEEEeCCCcEEE
Q psy4606 8 VPPDILNEESSSDIMAPEGGTIKLVCKAKG-YPRP-HITWKREDGQEII 54 (69)
Q Consensus 8 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~P~P-~~~W~~~~~~~~~ 54 (69)
++|.+...+.+ ..+..++|.|.|.| +|.. .++|.+ +|+.+.
T Consensus 167 ~~P~v~v~~~~-----~~~~~~~L~C~~~gFyP~~i~v~W~~-~g~~~~ 209 (260)
T 1r3h_A 167 DPPKAHVTRHP-----RPEGDVTLRCWALGFYPADITLTWQK-DGEELT 209 (260)
T ss_dssp BCCEEEEECCC-----CTTSEEEEEEEEESCBSSCCCCEEEE-SSCBCC
T ss_pred CCCeeEEEccc-----ccCCcceEEEEEeeEECCeEEEEEEE-CCEECC
Confidence 56766543211 14567999999999 7764 689999 777653
No 451
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=97.58 E-value=0.00028 Score=37.26 Aligned_cols=42 Identities=17% Similarity=0.239 Sum_probs=31.6
Q ss_pred cCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcEEE
Q psy4606 8 VPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEII 54 (69)
Q Consensus 8 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~~~ 54 (69)
.+|.+... +.. .+.+|+.++|.|.+.+ +.+.+.|+| ++..+.
T Consensus 6 ~kP~i~~~--P~~-~v~~G~~VtL~C~~~~-~~~~~~w~k-~g~~~~ 47 (242)
T 1p6f_A 6 PKPFIWAE--PHF-MVPKEKQVTICCQGNY-GAVEYQLHF-EGSLFA 47 (242)
T ss_dssp CCCEEEEE--SCS-EEETTCCEEEEEECCT-TCCEEEEEE-TTEEEE
T ss_pred CCCEEEee--CCC-ccCCCCcEEEEEeeCC-CCcEEEEEE-CCCccc
Confidence 46777766 444 6788999999999875 457899999 676543
No 452
>2p24_B H-2 class II histocompatibility antigen, A-U beta; MHC, I-AU, immunoglobulin fold, MBP, immune system; 2.15A {Mus musculus} PDB: 3cup_B* 1es0_B 3rdt_D 1lnu_B* 3c5z_D 3c60_D 3c6l_D
Probab=97.57 E-value=9.1e-05 Score=39.84 Aligned_cols=28 Identities=36% Similarity=0.719 Sum_probs=21.1
Q ss_pred CCeEEEEeeEee-ecCC-eEEEEeCCCcEEE
Q psy4606 26 GGTIKLVCKAKG-YPRP-HITWKREDGQEII 54 (69)
Q Consensus 26 g~~~~l~C~~~g-~P~P-~~~W~~~~~~~~~ 54 (69)
+..++|.|.+.| +|.. .++|.+ ||+.+.
T Consensus 161 ~~~~~L~C~v~gFyP~~I~v~W~~-~g~~~~ 190 (259)
T 2p24_B 161 NHHNTLVCSVTDFYPAKIKVRWFR-NGQEET 190 (259)
T ss_dssp ---CEEEEEEEEEBSSCCEEEEEE-TTEEEC
T ss_pred CCceEEEEEEeeeeCCceEEEEEE-CCcccc
Confidence 567899999999 8864 789999 887763
No 453
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=97.57 E-value=0.00011 Score=39.20 Aligned_cols=37 Identities=16% Similarity=0.484 Sum_probs=30.6
Q ss_pred CEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeC
Q psy4606 10 PDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKRE 48 (69)
Q Consensus 10 p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~ 48 (69)
+.+... +..+.+.+|+.+.|.|.+.+.|.+.+.|++.
T Consensus 25 ~~v~~~--p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~ 61 (279)
T 2wbj_D 25 AVVSQH--PSWVISKSGTSVKIECRSLDFQATTMFWYRQ 61 (279)
T ss_dssp CCEEEE--CSEEEEETTSCEEEEEEESSSCEEEEEEEEE
T ss_pred ceEEeC--CCeEEecCCCeEEEEEEeCCCCCCeEEEEEe
Confidence 445544 6667889999999999999889999999984
No 454
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=97.57 E-value=0.0001 Score=39.15 Aligned_cols=37 Identities=14% Similarity=0.358 Sum_probs=29.7
Q ss_pred CEEeecCCCceEEecCCCeEEEEeeEeeec------CCeEEEEeC
Q psy4606 10 PDILNEESSSDIMAPEGGTIKLVCKAKGYP------RPHITWKRE 48 (69)
Q Consensus 10 p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P------~P~~~W~~~ 48 (69)
+.+... +..+.+.+|+.+.|.|.+.+.| .+.+.|++.
T Consensus 6 ~~v~q~--p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~ 48 (264)
T 2gjj_A 6 IVLTQT--PSSLPVSVGEKVTMTCKSSQTLLYSNNQKNYLAWYQQ 48 (264)
T ss_dssp CCEEEE--CSEEEEETTCCEEEEEEESSCCEETTTTEECEEEEEE
T ss_pred cceEec--CCeEEecCCCcEEEEeEcCCcccccccCCceEEEEEE
Confidence 444444 5667888999999999999987 789999984
No 455
>2z35_A T-cell receptor alpha-chain; immune receptor, immune system; 2.20A {Mus musculus} PDB: 2pxy_A 2z31_A 1ac6_A
Probab=97.56 E-value=0.00023 Score=33.22 Aligned_cols=31 Identities=13% Similarity=0.349 Sum_probs=26.7
Q ss_pred CceEEecCCCeEEEEeeEeeecCCeEEEEeC
Q psy4606 18 SSDIMAPEGGTIKLVCKAKGYPRPHITWKRE 48 (69)
Q Consensus 18 ~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~ 48 (69)
+..+.+.+|+.++|.|...+.+.+.+.|++.
T Consensus 7 p~~~~~~~G~~v~L~C~~~~~~~~~v~W~rq 37 (112)
T 2z35_A 7 GGQVALSEEDFLTIHCNYSASGYPALFWYVQ 37 (112)
T ss_dssp CSEEEEETTCCEEECCEEECSSCCEEEEEEE
T ss_pred CCcEEEcCCCCEEEEEEECCCCCCeEEEEEE
Confidence 5567788999999999998877889999984
No 456
>1zxq_A ICAM-2, intercellular adhesion molecule-2; immunoglobulin fold, cell adhesion, glycoprotein, transmembr; HET: NAG; 2.20A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=97.56 E-value=0.00019 Score=37.26 Aligned_cols=51 Identities=14% Similarity=0.242 Sum_probs=35.4
Q ss_pred eeEEEEcCCEEeecCCCceEEecCCCeEEEEeeEee-ecCCe--EEEEeCCCcEEE
Q psy4606 2 GYLDVVVPPDILNEESSSDIMAPEGGTIKLVCKAKG-YPRPH--ITWKREDGQEII 54 (69)
Q Consensus 2 ~~l~V~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~P~P~--~~W~~~~~~~~~ 54 (69)
+.|.|..+|...... ........|+.++|.|.+.| .|.+. +.|++ +.+.+.
T Consensus 80 ~~itVy~~P~~v~i~-~~p~~~~~G~~~tL~C~v~~v~P~~~L~v~llr-G~~~l~ 133 (192)
T 1zxq_A 80 SNVSVYQPPRQVILT-LQPTLVAVGKSFTIECRVPTVEPLDSLTLFLFR-GNETLH 133 (192)
T ss_dssp EEEEECBCCCCCEEE-EESSEECTTSEEEEEEEECSCBCGGGEEEEEEE-TTEEEE
T ss_pred EEEEEEeCCCCceEc-cCCccccCCCcEEEEEEeCCeECCCCcEEEEEc-CCEEee
Confidence 456777777543320 11235778999999999987 89876 68999 666654
No 457
>4ffy_L DENV1-E111 single chain variable fragment (light; viral envelope proteins, structural genomics, antibody epito flavivirus, niaid; 2.50A {Mus musculus}
Probab=97.56 E-value=0.00012 Score=35.03 Aligned_cols=31 Identities=16% Similarity=0.415 Sum_probs=26.0
Q ss_pred CceEEecCCCeEEEEeeEeeec----CCeEEEEeC
Q psy4606 18 SSDIMAPEGGTIKLVCKAKGYP----RPHITWKRE 48 (69)
Q Consensus 18 ~~~~~~~~g~~~~l~C~~~g~P----~P~~~W~~~ 48 (69)
+..+.+.+|+.++|.|...+.+ .+.+.|++.
T Consensus 8 p~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~ 42 (126)
T 4ffy_L 8 PASLAVSLGQRATISCRASESVDHYGNSFIYWYQQ 42 (126)
T ss_dssp CSEEEEETTSCEEEEEEESSCCEETTEECEEEEEE
T ss_pred CCeEEEeCCCCEEEEEecCCCcccCCCceEEEEEE
Confidence 5557788999999999998876 678999983
No 458
>1pfc_A IGG1 PFC' FC; immunoglobulin; 3.12A {Cavia porcellus} SCOP: b.1.1.2
Probab=97.56 E-value=2.2e-05 Score=37.33 Aligned_cols=25 Identities=24% Similarity=0.712 Sum_probs=20.6
Q ss_pred CCeEEEEeeEee-ecCC-eEEEEeCCCc
Q psy4606 26 GGTIKLVCKAKG-YPRP-HITWKREDGQ 51 (69)
Q Consensus 26 g~~~~l~C~~~g-~P~P-~~~W~~~~~~ 51 (69)
+..+.|.|.+.| +|.. .++|.+ +++
T Consensus 29 ~~~~~L~C~v~gFyP~~i~v~W~~-~~~ 55 (113)
T 1pfc_A 29 KKKVSLTCMITGFYPADINVEWDS-SEP 55 (113)
T ss_dssp TTSCCEEEEEESCCSSCCEEESSS-CCT
T ss_pred CCceEEEEEEeeeECCCeEEEEEE-CCC
Confidence 456899999999 8887 899998 553
No 459
>2aw2_A B and T lymphocyte attenuator; IGI domain, IGG domain, TNFRSF, protein-protein complex, IMM system; HET: NAG FUL; 2.80A {Homo sapiens} SCOP: b.1.1.1
Probab=97.55 E-value=0.00046 Score=32.90 Aligned_cols=34 Identities=32% Similarity=0.595 Sum_probs=29.1
Q ss_pred CceEEecCCCeEEEEeeEee-ecCCeEEEEeCCCc
Q psy4606 18 SSDIMAPEGGTIKLVCKAKG-YPRPHITWKREDGQ 51 (69)
Q Consensus 18 ~~~~~~~~g~~~~l~C~~~g-~P~P~~~W~~~~~~ 51 (69)
.+.-.+..|..+.|.|.+.+ .+.|.++|.|.++.
T Consensus 18 ~S~hsv~~G~~f~leCpv~yc~~rP~VtWcKln~~ 52 (120)
T 2aw2_A 18 QSEHSILAGDPFELECPVKYCANRPHVTWCKLNGT 52 (120)
T ss_dssp TEEEEEETTSCEEEEEEEECSSSCCEEEEEEECSS
T ss_pred cccceEecCCeEEEEccEEeccCCCceEEEecCCc
Confidence 45567888999999999999 79999999996653
No 460
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=97.54 E-value=0.00032 Score=36.72 Aligned_cols=29 Identities=17% Similarity=0.479 Sum_probs=25.4
Q ss_pred eEEecCCCeEEEEeeEeeecCC--eEEEEeCC
Q psy4606 20 DIMAPEGGTIKLVCKAKGYPRP--HITWKRED 49 (69)
Q Consensus 20 ~~~~~~g~~~~l~C~~~g~P~P--~~~W~~~~ 49 (69)
.+.+..|+.+.|.|.+ |.|.| .+.|++.+
T Consensus 16 ~v~v~~G~sv~L~C~a-~~p~P~~~i~W~~~~ 46 (210)
T 1gsm_A 16 VVAVALGASRQLTCRL-ACADRGASVQWRGLD 46 (210)
T ss_dssp EEEEETTCCEEEEEEE-CCSSTTCEEEEESST
T ss_pred ceEEeCCCCEEEEEEC-CCCCCCcceEEeecc
Confidence 3678899999999999 99888 99999843
No 461
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=97.53 E-value=0.00035 Score=35.91 Aligned_cols=30 Identities=20% Similarity=0.334 Sum_probs=24.5
Q ss_pred ceEEecCCCeEEEEeeEeeecCC---eEEEEeC
Q psy4606 19 SDIMAPEGGTIKLVCKAKGYPRP---HITWKRE 48 (69)
Q Consensus 19 ~~~~~~~g~~~~l~C~~~g~P~P---~~~W~~~ 48 (69)
..+.+..|+.+.|.|.+.+.|.+ .+.|+|.
T Consensus 12 ~pV~v~~G~~v~L~C~v~~~~~~~~~~V~W~k~ 44 (226)
T 4f80_A 12 GPILAMVGEDADLPCHLFPTMSAETMELKWVSS 44 (226)
T ss_dssp SCEEEETTSCEEEEEEEESCCCCTTSEEEEEET
T ss_pred CCEEEEcCCcEEEEEEEECCCCCCceEEEEEEC
Confidence 34667889999999999887665 6999984
No 462
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=97.53 E-value=8.8e-05 Score=38.91 Aligned_cols=33 Identities=18% Similarity=0.421 Sum_probs=27.3
Q ss_pred CceEEecCCCeEEEEeeE---eeecCCeEEEEeCCC
Q psy4606 18 SSDIMAPEGGTIKLVCKA---KGYPRPHITWKREDG 50 (69)
Q Consensus 18 ~~~~~~~~g~~~~l~C~~---~g~P~P~~~W~~~~~ 50 (69)
+....+..|+.+.|.|.+ .|.|.|.+.|++.++
T Consensus 125 p~~~~v~~G~~v~L~C~~~~~~~~p~~~v~W~~~~~ 160 (268)
T 3mj6_A 125 PRDLRVRVGDTTQMRCSIQSTEEKRVTKVNWMFSSG 160 (268)
T ss_dssp CSEEEEETTCCEEECCBCEESSSSCCCEEEEEEECT
T ss_pred CCccccccCCcEEEEEEecCCCCCCccceEEEecCC
Confidence 445678899999999999 567999999998433
No 463
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=97.53 E-value=0.00016 Score=37.92 Aligned_cols=36 Identities=25% Similarity=0.538 Sum_probs=29.5
Q ss_pred CEEeecCCCceEEecCCCeEEEEeeEee--ecCCeEEEEe
Q psy4606 10 PDILNEESSSDIMAPEGGTIKLVCKAKG--YPRPHITWKR 47 (69)
Q Consensus 10 p~~~~~~~~~~~~~~~g~~~~l~C~~~g--~P~P~~~W~~ 47 (69)
|.+... +..+.+.+|+.++|.|.+.| .|.+.+.|++
T Consensus 7 ~~~~~~--~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r 44 (256)
T 3juy_B 7 QVQLVQ--SGAEVKKPGASVKVSCQASGYRFSHFTVHWVR 44 (256)
T ss_dssp CCEEEE--CCCEEECTTCCEEEEEEEESSCGGGSCEEEEE
T ss_pred eEEEEe--cCCceecCCCeEEEEEEeecccccCceEEEEE
Confidence 444444 66788999999999999998 4789999997
No 464
>1j05_L T84.66 antibody, anti-CEA MAB T84.66, light chain; immunoglobulin, immune system; 1.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1qfw_L* 1qnz_L 3iy3_A 3iy4_A
Probab=97.53 E-value=0.00011 Score=34.23 Aligned_cols=31 Identities=13% Similarity=0.360 Sum_probs=25.8
Q ss_pred CceEEecCCCeEEEEeeEeeec----CCeEEEEeC
Q psy4606 18 SSDIMAPEGGTIKLVCKAKGYP----RPHITWKRE 48 (69)
Q Consensus 18 ~~~~~~~~g~~~~l~C~~~g~P----~P~~~W~~~ 48 (69)
+..+.+.+|+.++|.|.+.+.+ .+.+.|++.
T Consensus 8 p~~~~~~~G~~v~L~C~~~~~~~~~~~~~v~W~r~ 42 (111)
T 1j05_L 8 PASLAVSLGQRATMSCRAGESVDIFGVGFLHWYQQ 42 (111)
T ss_dssp CSEEECCTTSCEEEEEEESSCCEETTEECEEEEEE
T ss_pred CCEEEEeCCCCEEEEeecCCCcccCCCceEEEEEe
Confidence 4556788999999999998876 578999984
No 465
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=97.53 E-value=0.00017 Score=38.52 Aligned_cols=41 Identities=20% Similarity=0.284 Sum_probs=30.9
Q ss_pred EcCCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcE
Q psy4606 7 VVPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQE 52 (69)
Q Consensus 7 ~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~ 52 (69)
..+|.+... +. ..+.+|+.++|.|.+.+ +.+.+.|+| ++..
T Consensus 5 ~~kP~i~~~--P~-~~V~~G~~VtL~C~~~~-~~~~~~W~k-~g~~ 45 (257)
T 1b6u_A 5 HRKPSLLAH--PG-PLVKSEETVILQCWSDV-RFQHFLLHR-EGKF 45 (257)
T ss_dssp CCCCEECCB--SC-SEEESSCCEEEEEEESS-CCSEEEEEE-ESTT
T ss_pred CCCCEEEEc--CC-CEecCCCCEEEEEecCC-CCcEEEEEE-CCCC
Confidence 356777665 43 56778999999999975 578999999 5543
No 466
>1u3h_A T-cell receptor alpha-chain; complex, immune system; 2.42A {Mus musculus} SCOP: b.1.1.1 PDB: 1b88_A 1kj2_A* 1kb5_A 1d9k_A*
Probab=96.67 E-value=1.3e-05 Score=37.54 Aligned_cols=31 Identities=19% Similarity=0.312 Sum_probs=26.8
Q ss_pred CceEEecCCCeEEEEeeEeeecCCeEEEEeC
Q psy4606 18 SSDIMAPEGGTIKLVCKAKGYPRPHITWKRE 48 (69)
Q Consensus 18 ~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~ 48 (69)
+..+.+.+|+.++|.|.+.+.+.+.+.|++.
T Consensus 6 p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~ 36 (110)
T 1u3h_A 6 PQSLTVWEGETAILNCSYENSAFDYFPWYQQ 36 (110)
Confidence 4556788999999999998888899999984
No 467
>1a6z_A HFE; HFE, hereditary hemochromatosis, MHC class I, MHC class I complex; 2.60A {Homo sapiens} SCOP: b.1.1.2 d.19.1.1 PDB: 1de4_A*
Probab=97.53 E-value=0.00039 Score=37.64 Aligned_cols=41 Identities=22% Similarity=0.508 Sum_probs=28.4
Q ss_pred eEEEEeeEee-ecCC-eEEEEeCCCcE-EEecC-CcEEEeCCCCCC
Q psy4606 28 TIKLVCKAKG-YPRP-HITWKREDGQE-IIIKE-GNTMVPKSKDIF 69 (69)
Q Consensus 28 ~~~l~C~~~g-~P~P-~~~W~~~~~~~-~~~~~-~~~~~~~~~~l~ 69 (69)
...|.|.|.| +|.. .++|.+ +|+. +..+. ...+..+.+++|
T Consensus 198 ~~~L~C~~~gFyP~~i~v~W~~-~g~~~~~~~~~~~~~~p~~Dgtf 242 (275)
T 1a6z_A 198 VTTLRCRALNYYPQNITMKWLK-DKQPMDAKEFEPKDVLPNGDGTY 242 (275)
T ss_dssp CEEEEEEEEEEBSSCCEEEEEE-TTEECCGGGSCCCEEEECTTSCE
T ss_pred CceeEEEEeeeECCceEEEEEE-CCEEccccceeeCCcEECCCCCE
Confidence 8999999999 7765 689999 8877 43322 234555555554
No 468
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=97.51 E-value=0.00021 Score=37.21 Aligned_cols=31 Identities=16% Similarity=0.335 Sum_probs=26.2
Q ss_pred CceEEecCCCeEEEEeeEeeecCCe-----EEEEeC
Q psy4606 18 SSDIMAPEGGTIKLVCKAKGYPRPH-----ITWKRE 48 (69)
Q Consensus 18 ~~~~~~~~g~~~~l~C~~~g~P~P~-----~~W~~~ 48 (69)
+....+..|+.+.|.|.+.|.|.|. +.|++.
T Consensus 10 p~~~~v~~G~~v~L~C~~~g~p~~~~~~~~v~W~k~ 45 (248)
T 3pv7_A 10 GGTQITPLNDNVTIFCNIFYSQPLNITSMGITWFWK 45 (248)
T ss_dssp TSEEEEETTSCEEECCEEEESSCCCTTSCEEEEEEE
T ss_pred CCCeEEeCCCCEEEeeEEecCCCcCCCceEEEEEEE
Confidence 4455677899999999999998886 999983
No 469
>1fne_B Protein (MHC class II I-EK, beta chain); histocompatibility antigen, immune system; HET: NAG; 1.90A {Mus musculus} SCOP: b.1.1.2 d.19.1.1 PDB: 1iea_B* 1i3r_B* 1fng_B* 1ktd_B* 1ieb_B* 1kt2_B* 3o6f_B 3t0e_B
Probab=97.50 E-value=0.0001 Score=38.86 Aligned_cols=28 Identities=32% Similarity=0.628 Sum_probs=22.5
Q ss_pred CCCeEEEEeeEee-ecCC-eEEEEeCCCcEE
Q psy4606 25 EGGTIKLVCKAKG-YPRP-HITWKREDGQEI 53 (69)
Q Consensus 25 ~g~~~~l~C~~~g-~P~P-~~~W~~~~~~~~ 53 (69)
.+..++|.|.+.| +|.. .++|.+ +|+.+
T Consensus 135 ~~~~~~L~C~v~gFyP~~I~v~W~~-~g~~~ 164 (224)
T 1fne_B 135 LEHHNLLVCSVSDFYPGNIEVRWFR-NGKEE 164 (224)
T ss_dssp CCSCCEEEEEEEEEBSSCCEEEEEE-TTEEC
T ss_pred cCCceEEEEEECeEECCeEEEEEEE-CCeec
Confidence 4567899999999 6654 789999 78765
No 470
>3fru_A Neonatal FC receptor; complex (immunoglobulin-binding protein), complex (immunoglo binding protein) complex; HET: NAG FUL NDG BMA MAN GAL FUC; 2.20A {Rattus norvegicus} SCOP: b.1.1.2 d.19.1.1 PDB: 1frt_A* 1i1a_A*
Probab=97.50 E-value=0.00038 Score=37.61 Aligned_cols=42 Identities=24% Similarity=0.398 Sum_probs=28.1
Q ss_pred CCeEEEEeeEee-ecCC-eEEEEeCCCcEEEecCCcEEEeCCCCCC
Q psy4606 26 GGTIKLVCKAKG-YPRP-HITWKREDGQEIIIKEGNTMVPKSKDIF 69 (69)
Q Consensus 26 g~~~~l~C~~~g-~P~P-~~~W~~~~~~~~~~~~~~~~~~~~~~l~ 69 (69)
...+.|.|.|.| +|.. .++|.+ +|+.+... ...+..+.+++|
T Consensus 193 ~~~~~L~C~~~gFyP~~i~v~W~~-~g~~~~~~-~~~~~p~~dgtf 236 (269)
T 3fru_A 193 SGSSVLTCAAFSFYPPELKFRFLR-NGLASGSG-NCSTGPNGDGSF 236 (269)
T ss_dssp TTEEEEEEEEEEEBSSCCEEEEEE-TTEECCCC-EEEEEECSSSCE
T ss_pred CCcceEEEEEcceECCcEEEEEEE-CCEECccc-ccceeeCCCCCE
Confidence 458999999999 7875 789999 78765321 123344444443
No 471
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=97.49 E-value=0.00022 Score=37.07 Aligned_cols=29 Identities=17% Similarity=0.284 Sum_probs=25.7
Q ss_pred CceEEecCCCeEEEEeeEeeecCCeEEEEe
Q psy4606 18 SSDIMAPEGGTIKLVCKAKGYPRPHITWKR 47 (69)
Q Consensus 18 ~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~ 47 (69)
+..+.+.+|+.+.|.| ..+.|.+.+.|++
T Consensus 9 p~~v~v~~G~~v~L~C-~~~~~~~~v~W~r 37 (245)
T 4ei6_B 9 PSHQIIDMGQMVTLNC-DPVSNHLYFYWYK 37 (245)
T ss_dssp CSEEEEETTCCEEEEE-ECCTTCCEEEEEE
T ss_pred CceEEecCCCCEEEEE-EcCCCCCEEEEEE
Confidence 5567788999999999 7788999999998
No 472
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=97.48 E-value=0.00018 Score=38.50 Aligned_cols=36 Identities=17% Similarity=0.323 Sum_probs=27.8
Q ss_pred CCEEeecCCCceEEecCCCeEEEEeeEee-ec-CCeEEEEe
Q psy4606 9 PPDILNEESSSDIMAPEGGTIKLVCKAKG-YP-RPHITWKR 47 (69)
Q Consensus 9 ~p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~P-~P~~~W~~ 47 (69)
++.+... +. ..+.+|+.+.|.|.+.+ .+ .+.+.|++
T Consensus 140 ~~~v~~~--p~-~~v~~G~~v~L~C~~~~~~~~~~~v~W~r 177 (280)
T 3fku_X 140 QPGLTQP--PS-VSKGLRQTATLTCTGNSNNVGNQGAAWLQ 177 (280)
T ss_dssp CCSBBCC--SE-EEECTTCCEEEEEECCCCCCCTTCCEEEE
T ss_pred eeEEEeC--Cc-EEEecCCCEEEEEEecCCCCCCceEEEEE
Confidence 4444443 44 78899999999999998 55 48999987
No 473
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=97.47 E-value=0.00028 Score=36.09 Aligned_cols=31 Identities=32% Similarity=0.665 Sum_probs=25.7
Q ss_pred CceEEecCCCeEEEEeeEeeec--CCeEEEEeC
Q psy4606 18 SSDIMAPEGGTIKLVCKAKGYP--RPHITWKRE 48 (69)
Q Consensus 18 ~~~~~~~~g~~~~l~C~~~g~P--~P~~~W~~~ 48 (69)
+..+.+.+|+.+.|.|.+.|.| .+.+.|++.
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~ 39 (219)
T 1c1e_H 7 SGPELKKPGETVKISCKASGYMFTNYGMNWVKQ 39 (219)
T ss_dssp CCCEEECTTCCEEEEEEEESSCGGGSEEEEEEE
T ss_pred CCCeEecCCCcEEEEEEEeCcccccceEEEEEe
Confidence 3345678899999999999865 789999984
No 474
>3khq_A B-cell antigen receptor complex-associated protei chain; CD79B, CD79A, IG-beta, BCR, IG domain, V-SET, immunoglobulin protein binding; HET: FLC GSH; 1.70A {Mus musculus} PDB: 3kho_A*
Probab=97.47 E-value=0.00027 Score=34.26 Aligned_cols=34 Identities=18% Similarity=0.321 Sum_probs=28.0
Q ss_pred EEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeC
Q psy4606 11 DILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKRE 48 (69)
Q Consensus 11 ~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~ 48 (69)
.+... +..+.+.+|+.+.|.|.+.+. +.+.|++.
T Consensus 19 ~v~q~--p~~~~v~~G~~v~L~C~~~~~--~~v~W~r~ 52 (133)
T 3khq_A 19 QIWQH--PRFAAKKRSSMVKFHCYTNHS--GALTWFRK 52 (133)
T ss_dssp SEEEE--CSEEEECTTCCEEEEEEESSS--SCEEEEEE
T ss_pred ceEEc--CceEEEeCCCeEEEEEEeCCC--CEEEEEEe
Confidence 34444 667788999999999999987 89999984
No 475
>3ov6_A Beta-2-microglobulin, T-cell surface glycoprotein cell surface glycoprotein CD1B; MHC, immunoglobulin domain, immune system, antigen presentat; HET: NAG D12 MK0; 2.50A {Homo sapiens}
Probab=97.47 E-value=0.00012 Score=41.53 Aligned_cols=45 Identities=22% Similarity=0.335 Sum_probs=29.9
Q ss_pred EEcCCEEeecCCCceEEecCCCeEEEEeeEee-ecCC-eEEEEeCCCcEEE
Q psy4606 6 VVVPPDILNEESSSDIMAPEGGTIKLVCKAKG-YPRP-HITWKREDGQEII 54 (69)
Q Consensus 6 V~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~P~P-~~~W~~~~~~~~~ 54 (69)
|..+|.+...+ .. ....+...+|.|.+.| +|.. .++|.+ +|+.+.
T Consensus 4 i~~~P~V~v~~--~~-~~~~~~~~tL~C~v~gFyP~~i~v~W~~-ng~~~~ 50 (397)
T 3ov6_A 4 IQRTPKIQVYS--RH-PAENGKSNFLNCYVSGFHPSDIEVDLLK-NGERIE 50 (397)
T ss_dssp CCBCCEEEEEE--SS-CCCTTSCEEEEEEEEEEBSSCEEEEEEE-TTEECS
T ss_pred CcCCCEEEEEc--CC-ccccCCcEEEEEEEeeEECCCCEEEEEE-CCeecc
Confidence 34677766431 11 2235677899999999 6654 688999 787653
No 476
>2wy3_A MHC class I polypeptide-related sequence B; immune system-viral protein complex, immune response, innate immunity, structural mimicry; HET: NAG PEU; 1.80A {Homo sapiens} PDB: 1je6_A 1hyr_C 1b3j_A*
Probab=97.47 E-value=1.7e-05 Score=43.80 Aligned_cols=42 Identities=29% Similarity=0.761 Sum_probs=0.0
Q ss_pred CeEEEEeeEee-ecCC-eEEEEeCCCcEEEecC--CcEEEeCCCCCC
Q psy4606 27 GTIKLVCKAKG-YPRP-HITWKREDGQEIIIKE--GNTMVPKSKDIF 69 (69)
Q Consensus 27 ~~~~l~C~~~g-~P~P-~~~W~~~~~~~~~~~~--~~~~~~~~~~l~ 69 (69)
..++|.|.+.| +|.+ .++|.+ +|+.+..+. ...+..+.+++|
T Consensus 197 ~~~~L~C~a~gFyP~~i~v~W~~-~g~~~~~~~~~~~~~~p~~Dgtf 242 (319)
T 2wy3_A 197 GNITVTCRASSFYPRNITLTWRQ-DGVSLSHNTQQWGDVLPDGNGTY 242 (319)
T ss_dssp -----------------------------------------------
T ss_pred cceeEEEEEeeeeCCcEEEEEEE-CCEECCCCcccccceEECCCCcE
Confidence 47899999999 8988 899999 787664332 123444455544
No 477
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=97.46 E-value=0.00041 Score=36.23 Aligned_cols=31 Identities=23% Similarity=0.393 Sum_probs=26.7
Q ss_pred CceEEecCCCeEEEEeeEeee--cCCeEEEEeC
Q psy4606 18 SSDIMAPEGGTIKLVCKAKGY--PRPHITWKRE 48 (69)
Q Consensus 18 ~~~~~~~~g~~~~l~C~~~g~--P~P~~~W~~~ 48 (69)
+..+.+.+|+.+.|.|.+.+. +.+.+.|++.
T Consensus 8 p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~ 40 (242)
T 1hxm_B 8 QISSTKTLSKTARLECVVSGITISATSVYWYRE 40 (242)
T ss_dssp CSEEEEETTCCEEEEEEEESSCTTTSCEEEEEE
T ss_pred CceEEecCCCcEEEEEEeCCccccCceEEEEEe
Confidence 566778899999999999885 6789999984
No 478
>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1
Probab=97.46 E-value=4.7e-05 Score=41.22 Aligned_cols=34 Identities=26% Similarity=0.471 Sum_probs=28.3
Q ss_pred ceEEecCCCeEEEEeeEeee-----cCCeEEEEeCCCcEE
Q psy4606 19 SDIMAPEGGTIKLVCKAKGY-----PRPHITWKREDGQEI 53 (69)
Q Consensus 19 ~~~~~~~g~~~~l~C~~~g~-----P~P~~~W~~~~~~~~ 53 (69)
.+..+..|+.+.|.|.+.|. |.|.+.|++ +++.+
T Consensus 8 ~~~~v~~G~~v~l~C~~~~~~~~~~~~~~i~W~~-~g~~l 46 (313)
T 2d9q_B 8 SAPIVHLGDPITASCIIKQNCSHLDPEPQILWRL-GAELQ 46 (313)
T ss_dssp SCSEECTTCCEEEEECCCTTSCSSCSCSCCEEES-SSCBC
T ss_pred CCcEEcCCCCEEEEEEECCCCCCCCcccceEEEe-CCEEC
Confidence 34567789999999999997 679999999 77665
No 479
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=97.45 E-value=0.00011 Score=37.45 Aligned_cols=31 Identities=23% Similarity=0.484 Sum_probs=25.9
Q ss_pred CceEEecCCCeEEEEeeEeeec---CCeEEEEeC
Q psy4606 18 SSDIMAPEGGTIKLVCKAKGYP---RPHITWKRE 48 (69)
Q Consensus 18 ~~~~~~~~g~~~~l~C~~~g~P---~P~~~W~~~ 48 (69)
+..+.+.+|+.+.|.|.+.|.| .|.+.|++.
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~ 40 (212)
T 1q0x_L 7 ESALTTSPGETVTLTCRSSTGAVTTSNYANWVQE 40 (212)
T ss_dssp CSEEEECTTCCEEEEEEESSSCCCGGGCCEEEEE
T ss_pred CCeEeecCCCCEEEEEEecccccCCCCeEEEEEe
Confidence 4456778999999999999987 489999984
No 480
>1eeq_A Kappa-4 immunoglobulin (light chain); protein stability, hydrogen bonds, immune system; 1.50A {Homo sapiens} SCOP: b.1.1.1 PDB: 1eeu_A 1lve_A 2lve_A 3lve_A 5lve_A 4lve_A 1efq_A 1qac_A 1ek3_A 2imm_A 1mvu_A 2ap2_A 1ap2_A 3bd3_A* 3bd4_A* 3bd5_A* 2imn_A 3dus_A* 3duu_A* 3dv4_A* ...
Probab=97.44 E-value=0.0002 Score=33.54 Aligned_cols=31 Identities=13% Similarity=0.390 Sum_probs=25.8
Q ss_pred CceEEecCCCeEEEEeeEeeec------CCeEEEEeC
Q psy4606 18 SSDIMAPEGGTIKLVCKAKGYP------RPHITWKRE 48 (69)
Q Consensus 18 ~~~~~~~~g~~~~l~C~~~g~P------~P~~~W~~~ 48 (69)
+..+.+.+|..++|.|.+.+.+ .+.+.|++.
T Consensus 8 p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~r~ 44 (114)
T 1eeq_A 8 PDSLAVSLGERATINCKSSQSVLDSSNSKNYLAWYQQ 44 (114)
T ss_dssp CSEEEECTTSCEEEEEEESSCCEETTTTEECEEEEEE
T ss_pred CCeEEEcCCCeEEEEEEcCCCccccccCCccEEEEEE
Confidence 5567788999999999998866 378999984
No 481
>4d8p_B Peptide from gamma-gliadin, linker, MHC class II; class II MHC, immune system; 3.05A {Triticum aestivum}
Probab=97.44 E-value=0.00024 Score=38.17 Aligned_cols=28 Identities=32% Similarity=0.621 Sum_probs=21.4
Q ss_pred CCeEEEEeeEee-ecCC-eEEEEeCCCcEEE
Q psy4606 26 GGTIKLVCKAKG-YPRP-HITWKREDGQEII 54 (69)
Q Consensus 26 g~~~~l~C~~~g-~P~P-~~~W~~~~~~~~~ 54 (69)
+..++|.|.+.| +|.. .++|.+ +|+.+.
T Consensus 143 ~~~~tL~C~a~gFyP~~I~v~W~~-ng~~~~ 172 (250)
T 4d8p_B 143 NHHNLLVCSVTDFYPAQIKVRWFR-NDQEET 172 (250)
T ss_dssp ---CEEEEEEEEEBSSCCEEEEEE-SSSEEC
T ss_pred cCcceEEEEEcceecceEEEEEEE-CCEEcc
Confidence 457899999999 8876 789999 787764
No 482
>1fo0_B Protein (BM3.3 T cell receptor beta-chain); class I MHC, H-2KB, TCR-PMHC complex, immune system; 2.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1nam_B* 2ol3_B* 1kb5_B 1kj2_B*
Probab=97.43 E-value=0.00036 Score=32.63 Aligned_cols=31 Identities=23% Similarity=0.534 Sum_probs=26.2
Q ss_pred CceEEecCCCeEEEEeeEeeecCCeEEEEeC
Q psy4606 18 SSDIMAPEGGTIKLVCKAKGYPRPHITWKRE 48 (69)
Q Consensus 18 ~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~ 48 (69)
+..+.+.+|+.++|.|...+.+.+.+.|++.
T Consensus 8 p~~~~v~~G~~vtL~C~~~~~~~~~v~W~rq 38 (112)
T 1fo0_B 8 PRWRLVPRGQAVNLRCILKNSQYPWMSWYQQ 38 (112)
T ss_dssp CSEEECCTTCCEEEEEEESCTTCCEEEEEEE
T ss_pred CCeEEEecCCcEEEEEEeCCCCCceEEEEEE
Confidence 5557788999999999997777889999984
No 483
>1dlf_L Anti-dansyl immunoglobulin IGG2A(S); FV fragment; 1.45A {Mus musculus} SCOP: b.1.1.1 PDB: 1wz1_L* 2dlf_L 1maj_A 1mak_A 1ktr_L 2cju_L* 2uud_K* 1dsf_L 3nn8_B 1n4x_L 1bfv_L* 1cfv_L* 2bfv_L* 1wt5_C
Probab=97.43 E-value=0.00037 Score=32.56 Aligned_cols=31 Identities=10% Similarity=0.297 Sum_probs=25.7
Q ss_pred CceEEecCCCeEEEEeeEeeec-----CCeEEEEeC
Q psy4606 18 SSDIMAPEGGTIKLVCKAKGYP-----RPHITWKRE 48 (69)
Q Consensus 18 ~~~~~~~~g~~~~l~C~~~g~P-----~P~~~W~~~ 48 (69)
+..+.+.+|+.++|.|.+.+.+ .+.+.|++.
T Consensus 8 p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~rq 43 (113)
T 1dlf_L 8 PLSLPVSLGNQASISCRSSQSLVHSNGNTYLHWYLQ 43 (113)
T ss_dssp CSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEE
T ss_pred CCEEEEcCCCCEEEEEEccccccccCCCceEEEEEE
Confidence 4567788999999999998865 478999983
No 484
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=97.43 E-value=5.3e-05 Score=38.58 Aligned_cols=31 Identities=23% Similarity=0.527 Sum_probs=26.6
Q ss_pred CceEEecCCCeEEEEeeEeeecCCeEEEEeC
Q psy4606 18 SSDIMAPEGGTIKLVCKAKGYPRPHITWKRE 48 (69)
Q Consensus 18 ~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~ 48 (69)
+..+.+.+|+.+.|.|.+.|.|.|.+.|++.
T Consensus 6 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~ 36 (212)
T 1nfd_E 6 PSSASVTVGETVKITCSGDQLPKNFAYWFQQ 36 (212)
T ss_dssp CSEEEEETTSCCCEEEEETTGGGSCCEEEEE
T ss_pred CCeEEEeCCCcEEEEEecCCCCCCeEEEEEE
Confidence 4456778999999999999999899999983
No 485
>3ov6_A Beta-2-microglobulin, T-cell surface glycoprotein cell surface glycoprotein CD1B; MHC, immunoglobulin domain, immune system, antigen presentat; HET: NAG D12 MK0; 2.50A {Homo sapiens}
Probab=97.42 E-value=0.00019 Score=40.77 Aligned_cols=27 Identities=44% Similarity=1.036 Sum_probs=22.3
Q ss_pred CCeEEEEeeEee-ecCC-eEEEEeCCCcEE
Q psy4606 26 GGTIKLVCKAKG-YPRP-HITWKREDGQEI 53 (69)
Q Consensus 26 g~~~~l~C~~~g-~P~P-~~~W~~~~~~~~ 53 (69)
+..++|.|.|.| +|.. .++|.+ +|+.+
T Consensus 317 ~~~~~L~C~a~gFYP~~I~v~W~~-~g~~~ 345 (397)
T 3ov6_A 317 PGRLQLVCHVSGFYPKPVWVMWMR-GEQEQ 345 (397)
T ss_dssp TTEEEEEEEEEEEBSSCCEEEEEE-TTEEC
T ss_pred CCceEEEEEEeeEeCCCeEEEEEE-CCEEC
Confidence 458899999999 7875 789999 77665
No 486
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=97.42 E-value=0.00025 Score=37.19 Aligned_cols=27 Identities=26% Similarity=0.742 Sum_probs=23.6
Q ss_pred EEecCCCeEEEEeeEeeec--CCeEEEEe
Q psy4606 21 IMAPEGGTIKLVCKAKGYP--RPHITWKR 47 (69)
Q Consensus 21 ~~~~~g~~~~l~C~~~g~P--~P~~~W~~ 47 (69)
..+.+|+.++|.|.+.|.| .+.+.|++
T Consensus 12 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~r 40 (256)
T 3umt_A 12 ELVKPGASVKISCKTSGYTFTEYTMHWVK 40 (256)
T ss_dssp EEECTTCCEEEEEEEESSCGGGSCEEEEE
T ss_pred eEEcCCCCEEEEEEEecccccccEEEEEE
Confidence 4577899999999999866 78999997
No 487
>2yf1_A Major histocompatibility complex class I glycoPro haplotype B21; immune system, BF21, immune response, immunoglobulin domain; 2.75A {Gallus gallus} PDB: 2yez_A 2yf5_A 2yf6_A
Probab=97.42 E-value=0.0005 Score=38.23 Aligned_cols=42 Identities=33% Similarity=0.740 Sum_probs=27.9
Q ss_pred CCeEEEEeeEee-ecCC-eEEEEeCCCcEEEecC-CcEEEeCCCCCC
Q psy4606 26 GGTIKLVCKAKG-YPRP-HITWKREDGQEIIIKE-GNTMVPKSKDIF 69 (69)
Q Consensus 26 g~~~~l~C~~~g-~P~P-~~~W~~~~~~~~~~~~-~~~~~~~~~~l~ 69 (69)
+.. +|.|.|.| +|.. .++|.+ ||+.+..+. ...+..+.+++|
T Consensus 214 ~~~-~L~C~a~gFyP~~I~v~W~~-ng~~~~~~~~~~~~~pn~DgTf 258 (329)
T 2yf1_A 214 GIL-TLSCRAHGFYPRPIVVSWLK-DGAVRGQDAQSGGIVPNGDGTY 258 (329)
T ss_dssp SCE-EEEEEEEEEBSSCCEEEEEE-TTEEECTTEEEEEEEECTTSCE
T ss_pred CCc-ceEEEEEEEECCceEEEEEE-CCEEccCCccccceEECCCCCE
Confidence 345 99999999 8875 689999 888764221 123445555543
No 488
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=97.41 E-value=0.00016 Score=38.10 Aligned_cols=28 Identities=21% Similarity=0.571 Sum_probs=24.4
Q ss_pred EEecCCCeEEEEeeEeeec--CCeEEEEeC
Q psy4606 21 IMAPEGGTIKLVCKAKGYP--RPHITWKRE 48 (69)
Q Consensus 21 ~~~~~g~~~~l~C~~~g~P--~P~~~W~~~ 48 (69)
..+.+|+.+.|.|.+.|.| .|.+.|++.
T Consensus 10 ~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~ 39 (257)
T 1f3r_B 10 GLVRPSETLSLTCTVSGFSLTSFSVSWVRH 39 (257)
T ss_dssp SEECTTSEEEEEEEEESSCTTTSCCEEEEE
T ss_pred ccccCCceEEEEEEEecccCCCccEEEEEe
Confidence 4678999999999999985 789999983
No 489
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=97.41 E-value=0.00024 Score=36.05 Aligned_cols=35 Identities=14% Similarity=0.143 Sum_probs=28.3
Q ss_pred CceEEecCCCeEEEEeeEee-ecCCeEEEEeCCCcEE
Q psy4606 18 SSDIMAPEGGTIKLVCKAKG-YPRPHITWKREDGQEI 53 (69)
Q Consensus 18 ~~~~~~~~g~~~~l~C~~~g-~P~P~~~W~~~~~~~~ 53 (69)
+..+.+..|+.+.|.|.+.+ .+.+.+.|++ ++..+
T Consensus 5 p~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~-~~~~i 40 (193)
T 2if7_A 5 PLMVNGILGESVTLPLEFPAGEKVNFITWLF-NETSL 40 (193)
T ss_dssp CEEEEEETTSCEEECCCCCCCSCCCEEEEEE-TTEEE
T ss_pred CeEEEEEecCeEEEeccCCCcccccEEEEEE-CCEEE
Confidence 55677889999999999976 5678999999 56543
No 490
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=97.40 E-value=0.00021 Score=37.80 Aligned_cols=39 Identities=8% Similarity=0.196 Sum_probs=30.5
Q ss_pred cCCEEeecCCCceEEecCCCeEEEEeeEeeec-----CCeEEEEeC
Q psy4606 8 VPPDILNEESSSDIMAPEGGTIKLVCKAKGYP-----RPHITWKRE 48 (69)
Q Consensus 8 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P-----~P~~~W~~~ 48 (69)
..+.+... +..+.+.+|+.++|.|.+.+.| .+.+.|++.
T Consensus 14 ~~~~v~~~--p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~ 57 (268)
T 1x9q_A 14 SDVVMTQT--PLSLPVSLGDQASISCRSSQSLVHSNGNTYLRWYLQ 57 (268)
T ss_dssp CCCCEEEE--CSEECCCTTCCEEEEEEESSCCBCTTSCBCEEEEEE
T ss_pred ccceEEee--CCeEEecCCCCEEEEeEecCCcccccCCceEEEEEE
Confidence 34455554 5567788999999999999977 589999984
No 491
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=97.38 E-value=0.00022 Score=37.63 Aligned_cols=31 Identities=32% Similarity=0.710 Sum_probs=25.9
Q ss_pred CceEEecCCCeEEEEeeEeeec--CCeEEEEeC
Q psy4606 18 SSDIMAPEGGTIKLVCKAKGYP--RPHITWKRE 48 (69)
Q Consensus 18 ~~~~~~~~g~~~~l~C~~~g~P--~P~~~W~~~ 48 (69)
+....+.+|+.++|.|.+.|.| .|.+.|++.
T Consensus 7 p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~ 39 (256)
T 1nqb_A 7 SGAELVKPGASVKLSCKASGYTFTSYWMHWVKQ 39 (256)
T ss_dssp CCCEEECTTCCEEEEEEECSSCGGGSCEEEEEE
T ss_pred CCCeeecCCCcEEEEEEeccccCCCceEEEEEE
Confidence 4456778999999999999975 789999983
No 492
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=97.38 E-value=0.00012 Score=37.45 Aligned_cols=31 Identities=16% Similarity=0.295 Sum_probs=27.0
Q ss_pred CceEEecCCCeEEEEeeEeeecC-CeEEEEeC
Q psy4606 18 SSDIMAPEGGTIKLVCKAKGYPR-PHITWKRE 48 (69)
Q Consensus 18 ~~~~~~~~g~~~~l~C~~~g~P~-P~~~W~~~ 48 (69)
+..+.+.+|+.+.|.|.+.+.|. +.+.|++.
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~~~ 38 (231)
T 2pet_A 7 PPLVEVMRGKSVILDCTPTGTHDHYMLEWFLT 38 (231)
T ss_dssp CSEEEEETTCCEEECCCCBSCCSEEEEEEEEE
T ss_pred CCcEEEEcCCCEEEecccCCCCCceEEEEEEe
Confidence 55677889999999999999885 99999973
No 493
>2d9c_A Signal-regulatory protein beta-1; beta-sandwich, SIRP-beta-1, CD172B antigen, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.37 E-value=0.00026 Score=34.10 Aligned_cols=32 Identities=22% Similarity=0.451 Sum_probs=26.7
Q ss_pred CceEEecCCCeEEEEeeEeee-cCCeEEEEeCC
Q psy4606 18 SSDIMAPEGGTIKLVCKAKGY-PRPHITWKRED 49 (69)
Q Consensus 18 ~~~~~~~~g~~~~l~C~~~g~-P~P~~~W~~~~ 49 (69)
+..+.+.+|+.++|.|.+.+. |.+.+.|++..
T Consensus 15 p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~r~~ 47 (136)
T 2d9c_A 15 EKSVSVAAGESATLRCAMTSLIPVGPIMWFRGA 47 (136)
T ss_dssp CSEEEEETTSCEEECCEESCCCSCCCCEEEETT
T ss_pred CcEEEEcCCCCEEEEEEEcCCCCCceEEEEeec
Confidence 456778899999999999875 67889999953
No 494
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=97.37 E-value=0.00019 Score=36.22 Aligned_cols=28 Identities=11% Similarity=0.194 Sum_probs=24.9
Q ss_pred EEecCCCeEEEEeeEeeecCCeEEEEeC
Q psy4606 21 IMAPEGGTIKLVCKAKGYPRPHITWKRE 48 (69)
Q Consensus 21 ~~~~~g~~~~l~C~~~g~P~P~~~W~~~ 48 (69)
..+.+|+.+.|.|.+.+.|.+.+.|++.
T Consensus 9 ~~v~~G~~v~L~C~~~~~~~~~v~W~~~ 36 (208)
T 3r4d_A 9 PQVAEDNNVLLLVHNLPLALGAFAWYKG 36 (208)
T ss_dssp SEEETTCCEEEEEECCCSSCSEEEEEES
T ss_pred ceeecCCcEEEEEeCCCCCceEEEeccC
Confidence 4567899999999998999999999983
No 495
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=97.37 E-value=0.00049 Score=36.09 Aligned_cols=30 Identities=23% Similarity=0.452 Sum_probs=25.3
Q ss_pred CceEEecCCCeEEEEeeEee--ecCCeEEEEe
Q psy4606 18 SSDIMAPEGGTIKLVCKAKG--YPRPHITWKR 47 (69)
Q Consensus 18 ~~~~~~~~g~~~~l~C~~~g--~P~P~~~W~~ 47 (69)
+....+.+|+.+.|.|.+.| .|.+.+.|++
T Consensus 15 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k 46 (257)
T 3gkz_A 15 SGPSLVKPSQTLSLTCSVTGDSVTSGYWSWIR 46 (257)
T ss_dssp ECCSEECTTCCEEEEEEEEESCCSSCEEEEEE
T ss_pred CCCeEEcCCCcEEEEEEEEcccccceEEEEEE
Confidence 44456889999999999999 4588999998
No 496
>1xt5_A Variable region-containing chitin-binding protein 3; innate immunity, VCBP, primordial antigen receptor, florida lancelet, amphioxus; 1.15A {Branchiostoma floridae}
Probab=97.37 E-value=0.00061 Score=32.43 Aligned_cols=31 Identities=26% Similarity=0.591 Sum_probs=25.2
Q ss_pred CceEEecCCCeEEEEeeEee---ecCCeEEEEeC
Q psy4606 18 SSDIMAPEGGTIKLVCKAKG---YPRPHITWKRE 48 (69)
Q Consensus 18 ~~~~~~~~g~~~~l~C~~~g---~P~P~~~W~~~ 48 (69)
+..+.+..|+.+.|.|...+ .+.+.+.|++.
T Consensus 11 ~~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~ 44 (135)
T 1xt5_A 11 HTEVEVHAGGTVELPCSYQLANDTQPPVISWLKG 44 (135)
T ss_dssp CSEEEEETTSCEEECCEEEEETCCSCCEEEEEEE
T ss_pred CceEEEeCCCCEEEeeEeecCCCCCccEEEEEee
Confidence 44566788999999999764 68899999984
No 497
>3jvg_A T-cell surface glycoprotein CD1A1 antigen; CD1, T-cell, lipid, antigen, transmembrane, disulfide bond, immune response, immunoglobulin domain, MHC I, polymorphism; HET: UNL NAG; 2.20A {Gallus gallus}
Probab=97.36 E-value=0.00057 Score=37.21 Aligned_cols=27 Identities=48% Similarity=1.105 Sum_probs=21.8
Q ss_pred CeEEEEeeEee-ecCC-eEEEEeCCCcEEE
Q psy4606 27 GTIKLVCKAKG-YPRP-HITWKREDGQEII 54 (69)
Q Consensus 27 ~~~~l~C~~~g-~P~P-~~~W~~~~~~~~~ 54 (69)
..++|.|.|.| +|.+ .++|.+ +|+.+.
T Consensus 195 ~~~~L~C~a~gFyP~~i~v~W~~-~g~~~~ 223 (281)
T 3jvg_A 195 AQLLLVCRVTSFYPRPIAVTWLR-DGREVP 223 (281)
T ss_dssp -CEEEEEEEEEEBSSCCEEEEEE-TTEECC
T ss_pred CcEEEEEEEcceeCCceEEEEEE-CCcccc
Confidence 56899999999 8876 789999 787653
No 498
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=97.35 E-value=0.0012 Score=35.48 Aligned_cols=45 Identities=18% Similarity=0.318 Sum_probs=30.8
Q ss_pred eEEEEc---CCEEeecCCCceEEecCCCeEEEEeeEeeecCCeEEEEeCCCcE
Q psy4606 3 YLDVVV---PPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQE 52 (69)
Q Consensus 3 ~l~V~~---~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~~~~~~ 52 (69)
.|.|.. +|.+... +... +.+|+.+.|.|.+. .+.+.+.|++ ++..
T Consensus 110 ~l~V~~~~~~p~~~~~--~~~~-v~~G~~v~L~C~~~-~~~~~~~w~k-~g~~ 157 (316)
T 3vh8_G 110 VIMVTGNHRKPSLLAH--PGPL-VKSGERVILQCWSD-IMFEHFFLHK-EGIS 157 (316)
T ss_dssp EEEEECSSCCCEEEEE--SCSE-EETTCCEEEEEEES-SCCSEEEEEE-TTCC
T ss_pred EEEEecCCCCCeEEec--CCCc-cCCCCeEEEEEcCC-CCCcEEEEEE-CCCc
Confidence 456653 4555554 3333 67899999999995 4667899999 5544
No 499
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=97.35 E-value=0.0004 Score=36.01 Aligned_cols=29 Identities=21% Similarity=0.532 Sum_probs=25.5
Q ss_pred CceEEecCCCeEEEEeeEeeecCCeEEEEe
Q psy4606 18 SSDIMAPEGGTIKLVCKAKGYPRPHITWKR 47 (69)
Q Consensus 18 ~~~~~~~~g~~~~l~C~~~g~P~P~~~W~~ 47 (69)
+..+.+.+|+.+.|.|.+.+ |.+.+.|++
T Consensus 9 p~~v~v~~G~~v~L~C~~~~-~~~~v~W~k 37 (240)
T 3q5y_A 9 PRHIIKEKGGRSVLTCIPIS-GHSNVVWYQ 37 (240)
T ss_dssp CSEEEEETTCCEEEEEECCT-TCCEEEEEE
T ss_pred cceeeecCCCcEEEEEEeCC-CCceEEEEE
Confidence 55677889999999999877 889999998
No 500
>1fo0_A Protein (BM3.3 T cell receptor alpha-chain); class I MHC, H-2KB, TCR-PMHC complex, immune system; 2.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1nam_A*
Probab=97.34 E-value=0.0005 Score=32.27 Aligned_cols=31 Identities=16% Similarity=0.320 Sum_probs=26.1
Q ss_pred CceEEecCCCeEEEEeeEeee-cCCeEEEEeC
Q psy4606 18 SSDIMAPEGGTIKLVCKAKGY-PRPHITWKRE 48 (69)
Q Consensus 18 ~~~~~~~~g~~~~l~C~~~g~-P~P~~~W~~~ 48 (69)
+..+.+.+|+.++|.|...+. +.+.+.|++.
T Consensus 7 p~~~~~~~G~~vtL~C~~~~~~~~~~v~W~rq 38 (116)
T 1fo0_A 7 QTSISVMEKTTVTMDCVYETQDSSYFLFWYKQ 38 (116)
T ss_dssp CCEEEEETTCCEEECCEECCCCSSCEEEEEEE
T ss_pred CCcEEEecCCcEEEEeEecCCCCCeEEEEEEe
Confidence 556778899999999999886 6778999983
Done!