RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy4606
(69 letters)
>d1qz1a3 b.1.1.4 (A:190-289) Neural cell adhesion molecule (NCAM)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 100
Score = 47.9 bits (113), Expect = 8e-10
Identities = 14/42 (33%), Positives = 24/42 (57%)
Query: 8 VPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKRED 49
VPP + +S + A G ++ LVC A G+P P ++W ++
Sbjct: 2 VPPTVQARQSIVNATANLGQSVTLVCDADGFPEPTMSWTKDG 43
>d2oz4a3 b.1.1.4 (A:367-450) Intercellular adhesion molecule-1,
ICAM-1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 84
Score = 42.3 bits (98), Expect = 1e-07
Identities = 8/43 (18%), Positives = 16/43 (37%)
Query: 9 PPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQ 51
P + + + PE +C+A G P P + ++
Sbjct: 2 GPRLDERDCPGNWTWPENSQQTPMCQAWGNPLPELKCLKDGTF 44
>d1cs6a3 b.1.1.4 (A:209-299) Axonin-1 {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 91
Score = 39.8 bits (92), Expect = 1e-06
Identities = 13/39 (33%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Query: 8 VPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWK 46
P I + +D A G + L C A G P P I W+
Sbjct: 3 YAPSIK-AKFPADTYALTGQMVTLECFAFGNPVPQIKWR 40
>d3dara1 b.1.1.4 (A:153-249) Fibroblast growth factor receptor,
FGFR {Human (Homo sapiens), FGFR2a [TaxId: 9606]}
Length = 97
Score = 39.8 bits (92), Expect = 1e-06
Identities = 9/29 (31%), Positives = 13/29 (44%)
Query: 23 APEGGTIKLVCKAKGYPRPHITWKREDGQ 51
P T+K C A G P P + W + +
Sbjct: 17 VPAANTVKFRCPAGGNPMPTMRWLKNGKE 45
>d1biha3 b.1.1.4 (A:210-306) Hemolin {Moth (Hyalophora cecropia)
[TaxId: 7123]}
Length = 97
Score = 39.5 bits (91), Expect = 2e-06
Identities = 7/30 (23%), Positives = 12/30 (40%)
Query: 18 SSDIMAPEGGTIKLVCKAKGYPRPHITWKR 47
S D+MA G + C P + + +
Sbjct: 10 SKDMMAKAGDVTMIYCMYGSNPMGYPNYFK 39
>d2fdbp2 b.1.1.4 (P:2252-2360) Fibroblast growth factor receptor,
FGFR {Human (Homo sapiens), FGFR1 [TaxId: 9606]}
Length = 109
Score = 39.2 bits (90), Expect = 3e-06
Identities = 11/40 (27%), Positives = 18/40 (45%)
Query: 12 ILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQ 51
IL ++ GG ++ VCK +PHI W + +
Sbjct: 6 ILQAGLPANASTVVGGDVEFVCKVYSDAQPHIQWIKHVEK 45
>d1biha4 b.1.1.4 (A:307-395) Hemolin {Moth (Hyalophora cecropia)
[TaxId: 7123]}
Length = 89
Score = 36.3 bits (83), Expect = 3e-05
Identities = 9/37 (24%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 9 PPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITW 45
P ++ I+ +G + + CK G P P++ W
Sbjct: 2 APKYE-QKPEKVIVVKQGQDVTIPCKVTGLPAPNVVW 37
>d1cs6a4 b.1.1.4 (A:300-388) Axonin-1 {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 89
Score = 36.0 bits (82), Expect = 4e-05
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 19 SDIMAPEGGTIKLVCKAKGYPRPHITW 45
+D A G ++ C A G PRP + W
Sbjct: 9 TDTEADIGSDLRWSCVASGKPRPAVRW 35
>d1rhfa1 b.1.1.1 (A:7-97) Tyrosine-protein kinase receptor tyro3,
N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 91
Score = 35.7 bits (81), Expect = 4e-05
Identities = 8/29 (27%), Positives = 13/29 (44%)
Query: 19 SDIMAPEGGTIKLVCKAKGYPRPHITWKR 47
+ +G +KL C +G P I W +
Sbjct: 4 VKLTVSQGQPVKLNCSVEGMEEPDIQWVK 32
>d1wiua_ b.1.1.4 (A:) Twitchin {Nematode (Caenorhabditis elegans)
[TaxId: 6239]}
Length = 93
Score = 35.7 bits (81), Expect = 4e-05
Identities = 13/38 (34%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
Query: 8 VPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITW 45
+ P IL +S I G T L G P P TW
Sbjct: 1 LKPKIL--TASRKIKIKAGFTHNLEVDFIGAPDPTATW 36
>d1gxea_ b.1.1.4 (A:) Cardiac myosin binding protein C, different
domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 130
Score = 35.8 bits (81), Expect = 7e-05
Identities = 11/46 (23%), Positives = 17/46 (36%), Gaps = 3/46 (6%)
Query: 9 PPDI---LNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQ 51
PP I I+ G ++L G P P + W++ Q
Sbjct: 4 PPKIHLDCPGRIPDTIVVVAGNKLRLDVPISGDPAPTVIWQKAITQ 49
>d1g1ca_ b.1.1.4 (A:) Titin {Human (Homo sapiens), different
modules [TaxId: 9606]}
Length = 98
Score = 34.8 bits (79), Expect = 1e-04
Identities = 8/37 (21%), Positives = 10/37 (27%), Gaps = 2/37 (5%)
Query: 9 PPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITW 45
P I E +G + G P P W
Sbjct: 4 APKIF--ERIQSQTVGQGSDAHFRVRVVGKPDPECEW 38
>d1tnna_ b.1.1.4 (A:) Titin {Human (Homo sapiens), different
modules [TaxId: 9606]}
Length = 91
Score = 33.3 bits (75), Expect = 4e-04
Identities = 8/27 (29%), Positives = 12/27 (44%)
Query: 19 SDIMAPEGGTIKLVCKAKGYPRPHITW 45
+ EG + + C G P P +TW
Sbjct: 7 RSMTVYEGESARFSCDTDGEPVPTVTW 33
>d2cqva1 b.1.1.4 (A:8-108) Telokin {Human (Homo sapiens) [TaxId:
9606]}
Length = 101
Score = 33.3 bits (75), Expect = 5e-04
Identities = 7/27 (25%), Positives = 10/27 (37%)
Query: 19 SDIMAPEGGTIKLVCKAKGYPRPHITW 45
D G +++L K G TW
Sbjct: 8 EDQKVRAGESVELFGKVTGTQPITCTW 34
>d1koaa1 b.1.1.4 (A:6265-6361) Twitchin {Nematode (Caenorhabditis
elegans) [TaxId: 6239]}
Length = 97
Score = 32.6 bits (73), Expect = 7e-04
Identities = 6/27 (22%), Positives = 9/27 (33%)
Query: 19 SDIMAPEGGTIKLVCKAKGYPRPHITW 45
EG + C+ P +TW
Sbjct: 9 YGTEVGEGQSANFYCRVIASSPPVVTW 35
>d1epfa2 b.1.1.4 (A:98-189) Neural cell adhesion molecule (NCAM)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 92
Score = 32.6 bits (73), Expect = 8e-04
Identities = 8/33 (24%), Positives = 11/33 (33%)
Query: 19 SDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQ 51
+ EG +VC P I WK +
Sbjct: 9 TPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRD 41
>d1nbqa2 b.1.1.4 (A:130-233) Junction adhesion molecule, JAM,
C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 104
Score = 32.3 bits (72), Expect = 0.001
Identities = 12/45 (26%), Positives = 15/45 (33%), Gaps = 3/45 (6%)
Query: 8 VPPDILNEESSSDIMAPEGGTIKLVCKAK-GYPRPHITWKREDGQ 51
VPP S A G L C + G P TW ++
Sbjct: 1 VPPSKPTVNIPSS--ATIGNRAVLTCSEQDGSPPSEYTWFKDGIV 43
>d2crya1 b.1.1.1 (A:8-122) Kin of IRRE-like protein 3, KIRREL3
{Human (Homo sapiens) [TaxId: 9606]}
Length = 115
Score = 32.4 bits (72), Expect = 0.001
Identities = 11/50 (22%), Positives = 16/50 (32%), Gaps = 3/50 (6%)
Query: 4 LDVVVPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEI 53
L V PP I S+ A G ++ C + P P +
Sbjct: 2 LTVNGPPII---SSTQTQHALHGEKGQIKCFIRSTPPPDRIAWSWKENVL 48
>d3b5ha1 b.1.1.4 (A:103-203) Cervical EMMPRIN {Human (Homo
sapiens) [TaxId: 9606]}
Length = 101
Score = 32.0 bits (71), Expect = 0.001
Identities = 11/41 (26%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 9 PPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKRED 49
PP + + S EG T LVCK++ P +
Sbjct: 2 PPRV--KAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKI 40
>d1fhga_ b.1.1.4 (A:) Telokin {Turkey (Meleagris gallopavo)
[TaxId: 9103]}
Length = 102
Score = 31.8 bits (71), Expect = 0.001
Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Query: 8 VPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITW 45
V P ++ D+ EG + CK +GYP P + W
Sbjct: 7 VKPYFT--KTILDMEVVEGSAARFDCKVEGYPDPEVMW 42
>d1cs6a1 b.1.1.4 (A:7-103) Axonin-1 {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 97
Score = 31.0 bits (69), Expect = 0.003
Identities = 10/42 (23%), Positives = 13/42 (30%), Gaps = 6/42 (14%)
Query: 6 VVVPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKR 47
P L E S + L C+A+ P WK
Sbjct: 8 EEQPAHTLFPEGS------AEEKVTLTCRARANPPATYRWKM 43
>d1f97a2 b.1.1.4 (A:129-238) Junction adhesion molecule, JAM,
C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Length = 110
Score = 30.4 bits (67), Expect = 0.006
Identities = 10/45 (22%), Positives = 13/45 (28%), Gaps = 3/45 (6%)
Query: 8 VPPDILNEESSSDIMAPEGGTIKLVCKAK-GYPRPHITWKREDGQ 51
VPP S G L C G P +W ++
Sbjct: 1 VPPSK--PTISVPSSVTIGNRAVLTCSEHDGSPPSEYSWFKDGIS 43
>d1nbqa1 b.1.1.1 (A:25-129) Junction adhesion molecule, JAM,
N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 105
Score = 30.5 bits (67), Expect = 0.007
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 15 EESSSDIMAPEGGTIKLVCKAKGYPRPHITW 45
S ++ PE +KL C G+ P + W
Sbjct: 8 HSSEPEVRIPENNPVKLSCAYSGFSSPRVEW 38
>d1iray3 b.1.1.4 (Y:205-311) Type-1 interleukin-1 receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 107
Score = 30.1 bits (66), Expect = 0.007
Identities = 9/42 (21%), Positives = 16/42 (38%), Gaps = 1/42 (2%)
Query: 10 PDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQ 51
P I++ + + + G I+L+C G WK
Sbjct: 2 PVIVSPANET-MEVDLGSQIQLICNVTGQLSDIAYWKWNGSV 42
>d2aw2a1 b.1.1.1 (A:34-137) B- and T-lymphocyte attenuator CD272
{Human (Homo sapiens) [TaxId: 9606]}
Length = 104
Score = 29.6 bits (65), Expect = 0.010
Identities = 11/37 (29%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 16 ESSSDIMAPEGGTIKLVCKAKGYP-RPHITWKREDGQ 51
+ S+ G +L C K RPH+TW + +G
Sbjct: 8 KRQSEHSILAGDPFELECPVKYCANRPHVTWCKLNGT 44
>d1iray2 b.1.1.4 (Y:102-204) Type-1 interleukin-1 receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 29.0 bits (64), Expect = 0.020
Identities = 9/42 (21%), Positives = 15/42 (35%), Gaps = 6/42 (14%)
Query: 14 NEESSSDIMAPEGGTIKLVC------KAKGYPRPHITWKRED 49
N ++ P G LVC K + P + W ++
Sbjct: 2 NAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDC 43
>d1iray1 b.1.1.4 (Y:1-101) Type-1 interleukin-1 receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 101
Score = 28.7 bits (63), Expect = 0.024
Identities = 8/55 (14%), Positives = 20/55 (36%), Gaps = 1/55 (1%)
Query: 16 ESSSDIMAPEGGTIKLVCKA-KGYPRPHITWKREDGQEIIIKEGNTMVPKSKDIF 69
E +++ C + ITW ++D + + E + + + K+
Sbjct: 7 EEKIILVSSANEIDVRPCPLNPNEHKGTITWYKDDSKTPVSTEQASRIHQHKEKL 61
>d1gl4b_ b.1.1.4 (B:) Perlecan Ig3 domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 89
Score = 28.4 bits (62), Expect = 0.027
Identities = 11/42 (26%), Positives = 15/42 (35%), Gaps = 2/42 (4%)
Query: 9 PPDILNEESSSDIMAPEGGTIKLVCKAK-GYPRPHITWKRED 49
P + EE S G + +C AK P + W R
Sbjct: 1 PIMVTVEEQRS-QSVRPGADVTFICTAKSKSPAYTLVWTRLH 41
>d1biha1 b.1.1.4 (A:5-98) Hemolin {Moth (Hyalophora cecropia)
[TaxId: 7123]}
Length = 94
Score = 28.5 bits (62), Expect = 0.031
Identities = 7/45 (15%), Positives = 18/45 (40%), Gaps = 2/45 (4%)
Query: 9 PPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEI 53
P + + ++++ E L C +G + ++DG+
Sbjct: 2 YPVLK--DQPAEVLFRENNPTVLECIIEGNDQGVKYSWKKDGKSY 44
>d1ypzf1 b.1.1.1 (F:1-120) T-cell antigen receptor {Human (Homo
sapiens), gamma-chain [TaxId: 9606]}
Length = 120
Score = 28.6 bits (63), Expect = 0.034
Identities = 6/24 (25%), Positives = 9/24 (37%)
Query: 15 EESSSDIMAPEGGTIKLVCKAKGY 38
E+ I P T ++ CK
Sbjct: 5 EQPEISISRPRDETAQISCKVFIE 28
>d1f97a1 b.1.1.1 (A:27-128) Junction adhesion molecule, JAM,
N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Length = 102
Score = 28.5 bits (62), Expect = 0.035
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 17 SSSDIMAPEGGTIKLVCKAKGYPRPHITWK 46
+ SD+ PE +IKL C G+ P + WK
Sbjct: 7 AQSDVQVPENESIKLTCTYSGFSSPRVEWK 36
>d1uvqa1 b.1.1.2 (A:85-183) Class II MHC alpha chain, C-terminal
domain {Human (Homo sapiens), HLA-DQ group [TaxId:
9606]}
Length = 99
Score = 28.0 bits (62), Expect = 0.040
Identities = 11/47 (23%), Positives = 16/47 (34%), Gaps = 3/47 (6%)
Query: 23 APEGGTIKLVCKAKG-YPRP-HITWKREDGQEIIIKEGNTMVPKSKD 67
G L+C +P +ITW +GQ + T D
Sbjct: 16 VTLGQPNTLICLVDNIFPPVVNITWLS-NGQSVTEGVSETSFLSKSD 61
>d1de4a1 b.1.1.2 (A:182-275) Hemochromatosis protein Hfe, alpha-3
domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 94
Score = 27.6 bits (61), Expect = 0.052
Identities = 10/40 (25%), Positives = 15/40 (37%), Gaps = 3/40 (7%)
Query: 23 APEGGTIKLVCKAKG-YPRP-HITWKREDGQEIIIKEGNT 60
L C+A YP+ + W +D Q + KE
Sbjct: 12 HVTSSVTTLRCRALNYYPQNITMKW-LKDKQPMDAKEFEP 50
>d1x44a1 b.1.1.4 (A:8-97) Myosin-binding protein C, slow-type
{Human (Homo sapiens) [TaxId: 9606]}
Length = 90
Score = 27.5 bits (60), Expect = 0.063
Identities = 6/29 (20%), Positives = 12/29 (41%), Gaps = 1/29 (3%)
Query: 19 SDIMAPEGGTIKLVCKAKGYPRPHITWKR 47
D A G ++L C+ ++ W +
Sbjct: 8 EDTTAYCGERVELECEV-SEDDANVKWFK 35
>d1u9ka_ b.1.1.1 (A:) TREM-1 (triggering receptor expressed on
myeloid cells 1) {Mouse (Mus musculus) [TaxId: 10090]}
Length = 110
Score = 27.6 bits (61), Expect = 0.064
Identities = 4/23 (17%), Positives = 7/23 (30%), Gaps = 1/23 (4%)
Query: 16 ESSSDIMAPEGGTIKLVCKAKGY 38
E + G T+ + C
Sbjct: 1 EEERYDLVE-GQTLTVKCPFNIM 22
>d1i9ea_ b.1.1.1 (A:) T-cell antigen receptor {Mouse (Mus
musculus), alpha-chain [TaxId: 10090]}
Length = 115
Score = 27.8 bits (61), Expect = 0.069
Identities = 7/31 (22%), Positives = 14/31 (45%)
Query: 17 SSSDIMAPEGGTIKLVCKAKGYPRPHITWKR 47
+ + EG +++L CK P++ W
Sbjct: 6 PDARVTVSEGASLQLRCKYSYSATPYLFWYV 36
>d2ij0c1 b.1.1.1 (C:1-117) T-cell antigen receptor {Human (Homo
sapiens), beta-chain [TaxId: 9606]}
Length = 118
Score = 27.6 bits (60), Expect = 0.076
Identities = 6/31 (19%), Positives = 14/31 (45%)
Query: 17 SSSDIMAPEGGTIKLVCKAKGYPRPHITWKR 47
S ++ G ++K+ C++ + W R
Sbjct: 7 HPSMVIVKSGTSVKIECRSLDTNIHTMFWYR 37
>d1tiua_ b.1.1.4 (A:) Twitchin {Human (Homo sapiens), Ig repeat 27
[TaxId: 9606]}
Length = 89
Score = 27.1 bits (59), Expect = 0.095
Identities = 5/27 (18%), Positives = 7/27 (25%), Gaps = 1/27 (3%)
Query: 19 SDIMAPEGGTIKLVCKAKGYPRPHITW 45
+ G T + P H W
Sbjct: 9 YGVEVFVGETAHFEIEL-SEPDVHGQW 34
>d1wwbx_ b.1.1.4 (X:) Ligand binding domain of trkB receptor
{Human (Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 27.2 bits (59), Expect = 0.10
Identities = 10/40 (25%), Positives = 13/40 (32%), Gaps = 5/40 (12%)
Query: 6 VVVPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITW 45
V P I ES + KG P+P + W
Sbjct: 1 VHFAPTITFLES-----PTSDHHWCIPFTVKGNPKPALQW 35
>d1j8hd1 b.1.1.1 (D:1-117) T-cell antigen receptor {Human (Homo
sapiens), alpha-chain [TaxId: 9606]}
Length = 115
Score = 27.1 bits (59), Expect = 0.12
Identities = 7/31 (22%), Positives = 12/31 (38%)
Query: 15 EESSSDIMAPEGGTIKLVCKAKGYPRPHITW 45
+ S + EG + L C P++ W
Sbjct: 4 TQLGSHVSVSEGALVLLRCNYSSSVPPYLFW 34
>d1hyrc1 b.1.1.2 (C:181-274) Class I MHC homolog, alpha-3 domain
{Human (Homo sapiens), Mic-a [TaxId: 9606]}
Length = 94
Score = 26.5 bits (58), Expect = 0.13
Identities = 9/46 (19%), Positives = 18/46 (39%), Gaps = 2/46 (4%)
Query: 24 PEGGTIKLVCKAKG-YPRP-HITWKREDGQEIIIKEGNTMVPKSKD 67
G I + C+A G YP ++W+++ + V +
Sbjct: 13 ASEGNITVTCRASGFYPWNITLSWRQDGVSLSHDTQQWGDVLPDGN 58
>d1vgeh1 b.1.1.1 (H:1-122) Immunoglobulin heavy chain variable
domain, VH {Human (Homo sapiens), cluster 1 [TaxId:
9606]}
Length = 122
Score = 27.0 bits (59), Expect = 0.14
Identities = 11/33 (33%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 13 LNEESSSDIMAPEGGTIKLVCKAKGYPRPHITW 45
L E+S +++ P G ++K+ CKA GY
Sbjct: 4 LLEQSGAEVKKP-GASVKVSCKASGYSFTSYGL 35
>d1fo0b_ b.1.1.1 (B:) T-cell antigen receptor {Mouse (Mus
musculus), beta-chain [TaxId: 10090]}
Length = 112
Score = 26.6 bits (58), Expect = 0.15
Identities = 9/35 (25%), Positives = 17/35 (48%)
Query: 15 EESSSDIMAPEGGTIKLVCKAKGYPRPHITWKRED 49
E++ + P G + L C K P ++W ++D
Sbjct: 5 EQNPRWRLVPRGQAVNLRCILKNSQYPWMSWYQQD 39
>d1rhhb1 b.1.1.1 (B:3-113) Immunoglobulin heavy chain variable
domain, VH {Human (Homo sapiens), cluster 1 [TaxId:
9606]}
Length = 130
Score = 26.2 bits (57), Expect = 0.24
Identities = 8/24 (33%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Query: 15 EESSSDIMAPEGGTIKLVCKAKGY 38
E+S +++ P G ++++ CKA G
Sbjct: 4 EQSGAEVKKP-GSSVQVSCKASGG 26
>d1mjuh1 b.1.1.1 (H:1-113) Immunoglobulin heavy chain variable
domain, VH {Mouse (Mus musculus), cluster 3.2 [TaxId:
10090]}
Length = 116
Score = 26.2 bits (57), Expect = 0.26
Identities = 9/30 (30%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 16 ESSSDIMAPEGGTIKLVCKAKGYPRPHITW 45
+ ++++ P G ++KL CKA GY +
Sbjct: 6 QPGAELVKP-GASVKLSCKASGYTFTNYWI 34
>d1mfah1 b.1.1.1 (H:251-367) Immunoglobulin heavy chain variable
domain, VH {Mouse (Mus musculus), cluster 3.2 [TaxId:
10090]}
Length = 117
Score = 25.8 bits (56), Expect = 0.29
Identities = 9/30 (30%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Query: 16 ESSSDIMAPEGGTIKLVCKAKGYPRPHITW 45
+S + + P G ++K+ CKA GY +
Sbjct: 6 QSGTVVARP-GASVKMSCKASGYTFTNYWM 34
>d1tvda_ b.1.1.1 (A:) T-cell antigen receptor {Human (Homo
sapiens), delta-chain [TaxId: 9606]}
Length = 116
Score = 25.6 bits (55), Expect = 0.35
Identities = 10/34 (29%), Positives = 13/34 (38%), Gaps = 1/34 (2%)
Query: 17 SSSDIMAPEGGTIKLVCKAKG-YPRPHITWKRED 49
SS D G + L+C Y P + W R
Sbjct: 6 SSPDQTVASGSEVVLLCTYDTVYSNPDLFWYRIR 39
>d1iqdb1 b.1.1.1 (B:1-114) Immunoglobulin heavy chain variable
domain, VH {Human (Homo sapiens), cluster 1 [TaxId:
9606]}
Length = 117
Score = 25.8 bits (56), Expect = 0.38
Identities = 8/30 (26%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Query: 16 ESSSDIMAPEGGTIKLVCKAKGYPRPHITW 45
+S +++ P G ++K+ CK GY +
Sbjct: 6 QSGAEVKKP-GASVKVSCKVSGYTLTELPV 34
>d1nlbh1 b.1.1.1 (H:1-113) Immunoglobulin heavy chain variable
domain, VH {Mouse (Mus musculus), cluster 4 [TaxId:
10090]}
Length = 118
Score = 25.4 bits (55), Expect = 0.40
Identities = 10/30 (33%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Query: 16 ESSSDIMAPEGGTIKLVCKAKGYPRPHITW 45
+S ++ P G T+K+ CKA GY +
Sbjct: 6 QSGPELKKP-GETVKISCKASGYTFTDFSM 34
>d2jelh1 b.1.1.1 (H:1-113) Immunoglobulin heavy chain variable
domain, VH {Mouse (Mus musculus), cluster 3.2 [TaxId:
10090]}
Length = 118
Score = 25.4 bits (55), Expect = 0.41
Identities = 8/30 (26%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Query: 16 ESSSDIMAPEGGTIKLVCKAKGYPRPHITW 45
+S +++ P G ++K+ CK GY
Sbjct: 6 QSGPELVRP-GVSVKISCKGSGYTFTTYAM 34
>d1n0xh1 b.1.1.1 (H:1-113) Immunoglobulin heavy chain variable
domain, VH {Human (Homo sapiens), cluster 1 [TaxId:
9606]}
Length = 127
Score = 25.5 bits (55), Expect = 0.41
Identities = 8/30 (26%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 16 ESSSDIMAPEGGTIKLVCKAKGYPRPHITW 45
+S +++ P G ++K+ C+A GY +
Sbjct: 6 QSGAEVKKP-GASVKVSCQASGYRFSNFVI 34
>d2fx7h1 b.1.1.1 (H:1-113) Immunoglobulin heavy chain variable
domain, VH {Human (Homo sapiens), cluster 1 [TaxId:
9606]}
Length = 127
Score = 25.5 bits (55), Expect = 0.44
Identities = 7/30 (23%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Query: 16 ESSSDIMAPEGGTIKLVCKAKGYPRPHITW 45
+S +++ P G ++ + CKA G
Sbjct: 6 QSGAEVKRP-GSSVTVSCKASGGSFSTYAL 34
>d2p49b1 b.1.1.1 (B:1-121) Camelid IG heavy chain variable domain,
VHh {Camel (Camelus dromedarius) [TaxId: 9838]}
Length = 121
Score = 25.4 bits (55), Expect = 0.45
Identities = 10/30 (33%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Query: 16 ESSSDIMAPEGGTIKLVCKAKGYPRPHITW 45
ES ++ GG+++L C A GY +I
Sbjct: 6 ESGGGLVQA-GGSLRLSCAASGYAYTYIYM 34
>d1bd2d1 b.1.1.1 (D:1-117) T-cell antigen receptor {Human (Homo
sapiens), alpha-chain [TaxId: 9606]}
Length = 111
Score = 25.6 bits (55), Expect = 0.45
Identities = 6/31 (19%), Positives = 11/31 (35%)
Query: 15 EESSSDIMAPEGGTIKLVCKAKGYPRPHITW 45
+++S + EG L C + W
Sbjct: 4 KQNSPSLSVQEGRISILNCDYTNSMFDYFLW 34
>d2ifga1 b.1.1.4 (A:192-283) High affinity nerve growth factor
receptor TrkA, different domains {Human (Homo sapiens)
[TaxId: 9606]}
Length = 92
Score = 25.1 bits (53), Expect = 0.46
Identities = 5/35 (14%), Positives = 11/35 (31%)
Query: 15 EESSSDIMAPEGGTIKLVCKAKGYPRPHITWKRED 49
+ + G + L C+ +G W +
Sbjct: 6 KVQVPNASVDVGDDVLLRCQVEGRGLEQAGWILTE 40
>d2ck0h1 b.1.1.1 (H:1-106) Immunoglobulin heavy chain variable
domain, VH {Mouse (Mus musculus), cluster 1 [TaxId:
10090]}
Length = 109
Score = 25.4 bits (55), Expect = 0.49
Identities = 9/32 (28%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Query: 16 ESSSDIMAPEGGTIKLVCKAKGYPRPHITWKR 47
ES ++ P G++KL C A G+
Sbjct: 6 ESGGGLVQP-RGSLKLSCAASGFTFNTDAMNW 36
>d1fn4b1 b.1.1.1 (B:1-106) Immunoglobulin heavy chain variable
domain, VH {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 116
Score = 25.5 bits (55), Expect = 0.50
Identities = 7/32 (21%), Positives = 12/32 (37%), Gaps = 1/32 (3%)
Query: 16 ESSSDIMAPEGGTIKLVCKAKGYPRPHITWKR 47
ES ++ P T+ L C G+ +
Sbjct: 6 ESGPGLVRP-SETLSLTCTVSGFSLTSFSVSW 36
>d2fb4h1 b.1.1.1 (H:1-119) Immunoglobulin heavy chain variable
domain, VH {Human (Homo sapiens), cluster 3 [TaxId:
9606]}
Length = 127
Score = 25.5 bits (55), Expect = 0.53
Identities = 6/32 (18%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Query: 16 ESSSDIMAPEGGTIKLVCKAKGYPRPHITWKR 47
+S ++ P G +++L C + G+
Sbjct: 6 QSGGGVVQP-GRSLRLSCSSSGFIFSSYAMYW 36
>d1oari_ b.1.1.1 (I:) Immunoglobulin heavy chain variable domain,
VH {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 103
Score = 25.1 bits (54), Expect = 0.55
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 26 GGTIKLVCKAKGY 38
G ++KL CKA GY
Sbjct: 2 GASVKLSCKASGY 14
>d1wwca_ b.1.1.4 (A:) NT3 binding domain of trkC receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 105
Score = 25.3 bits (54), Expect = 0.56
Identities = 8/42 (19%), Positives = 14/42 (33%), Gaps = 5/42 (11%)
Query: 6 VVVPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKR 47
V PP +++ E + +G P P + W
Sbjct: 2 VYYPPRVVSLEEPE-----LRLEHCIEFVVRGNPPPTLHWLH 38
>d1rz7h1 b.1.1.1 (H:1-113) Immunoglobulin heavy chain variable
domain, VH {Human (Homo sapiens), cluster 1 [TaxId:
9606]}
Length = 119
Score = 25.1 bits (54), Expect = 0.56
Identities = 10/30 (33%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Query: 16 ESSSDIMAPEGGTIKLVCKAKGYPRPHITW 45
+S +++ P G T+K+ CKA GY
Sbjct: 6 QSGAEVKKP-GATVKISCKASGYTFSDFYM 34
>d1sq2n_ b.1.1.1 (N:) Novel antigen receptor (against lysozyme)
{Nurse shark (Ginglymostoma cirratum) [TaxId: 7801]}
Length = 112
Score = 25.1 bits (54), Expect = 0.58
Identities = 4/33 (12%), Positives = 12/33 (36%), Gaps = 2/33 (6%)
Query: 15 EESSSDIMAPEGGTIKLVCKAKG--YPRPHITW 45
+++ + G ++ + C + Y W
Sbjct: 3 DQTPRSVTKETGESLTINCVLRDASYALGSTCW 35
>d1he7a_ b.1.1.4 (A:) High affinity nerve growth factor receptor
TrkA, different domains {Human (Homo sapiens) [TaxId:
9606]}
Length = 107
Score = 24.9 bits (53), Expect = 0.60
Identities = 5/32 (15%), Positives = 9/32 (28%), Gaps = 3/32 (9%)
Query: 19 SDIMAPEGGTIKLVC---KAKGYPRPHITWKR 47
+ + + C G P P + W
Sbjct: 5 ASVQLHTAVEMHHWCIPFSVDGQPAPSLRWLF 36
>d1ncwh1 b.1.1.1 (H:1-113) Immunoglobulin heavy chain variable
domain, VH {Mouse (Mus musculus), cluster 7.1 [TaxId:
10090]}
Length = 119
Score = 25.1 bits (54), Expect = 0.61
Identities = 7/36 (19%), Positives = 12/36 (33%), Gaps = 1/36 (2%)
Query: 16 ESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQ 51
+S ++ P ++ L C GY Q
Sbjct: 6 QSGPGLVKP-SQSLSLTCTVTGYSITSDFAWNWIRQ 40
>d1jnhb1 b.1.1.1 (B:1-117) Immunoglobulin heavy chain variable
domain, VH {Mouse (Mus musculus), cluster 3.2 [TaxId:
10090]}
Length = 117
Score = 25.0 bits (54), Expect = 0.62
Identities = 8/30 (26%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Query: 16 ESSSDIMAPEGGTIKLVCKAKGYPRPHITW 45
+S +++ P G ++KL C+ GY
Sbjct: 6 QSGAELARP-GASVKLSCRTSGYSFTTYWM 34
>d1rzga1 b.1.1.1 (A:1-113) Immunoglobulin heavy chain variable
domain, VH {Human (Homo sapiens), cluster 1 [TaxId:
9606]}
Length = 130
Score = 25.1 bits (54), Expect = 0.63
Identities = 8/30 (26%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Query: 16 ESSSDIMAPEGGTIKLVCKAKGYPRPHITW 45
+S +++ P G ++K+ CKA G +
Sbjct: 6 QSGAEVKKP-GSSVKVSCKASGGTFSNYAI 34
>d1jpth1 b.1.1.1 (H:1-117) Immunoglobulin heavy chain variable
domain, VH {Engineered (including hybrid species)}
Length = 117
Score = 25.0 bits (54), Expect = 0.68
Identities = 9/30 (30%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Query: 16 ESSSDIMAPEGGTIKLVCKAKGYPRPHITW 45
ES ++ P GG+++L C A G+
Sbjct: 6 ESGGGLVQP-GGSLRLSCAASGFNIKEYYM 34
>d1ac6a_ b.1.1.1 (A:) T-cell antigen receptor {Mouse (Mus
musculus), alpha-chain [TaxId: 10090]}
Length = 110
Score = 24.7 bits (53), Expect = 0.70
Identities = 4/31 (12%), Positives = 9/31 (29%)
Query: 17 SSSDIMAPEGGTIKLVCKAKGYPRPHITWKR 47
+ + E + + C P + W
Sbjct: 6 TEGQVALSEEDFLTIHCNYSASGYPALFWYV 36
>d1f3dh1 b.1.1.1 (H:1-121) Immunoglobulin heavy chain variable
domain, VH {Mouse (Mus musculus), cluster 3.2 [TaxId:
10090]}
Length = 115
Score = 24.7 bits (53), Expect = 0.73
Identities = 9/30 (30%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Query: 16 ESSSDIMAPEGGTIKLVCKAKGYPRPHITW 45
+S +++ P G ++K+ CKA GY
Sbjct: 6 QSGPELVKP-GASVKVSCKASGYSFIDYNI 34
>d1dn0b1 b.1.1.1 (B:1-120) Immunoglobulin heavy chain variable
domain, VH {Human (Homo sapiens), cluster 2.1 [TaxId:
9606]}
Length = 120
Score = 24.7 bits (53), Expect = 0.74
Identities = 6/32 (18%), Positives = 11/32 (34%), Gaps = 1/32 (3%)
Query: 16 ESSSDIMAPEGGTIKLVCKAKGYPRPHITWKR 47
+ + ++ P T+ L C G W
Sbjct: 6 QWGAGLLKP-SETLSLTCAVYGGSFSDYYWSW 36
>d1lmka1 b.1.1.1 (A:2-127) Immunoglobulin heavy chain variable
domain, VH {Mouse (Mus musculus), cluster 3.2 [TaxId:
10090]}
Length = 126
Score = 25.0 bits (54), Expect = 0.76
Identities = 9/30 (30%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 16 ESSSDIMAPEGGTIKLVCKAKGYPRPHITW 45
+S +++M P G ++K+ CK GY +
Sbjct: 5 QSGTELMKP-GRSLKISCKTTGYIFSNYWI 33
>d3c2ah1 b.1.1.1 (H:1-113) Immunoglobulin heavy chain variable
domain, VH {Human (Homo sapiens), cluster 4 [TaxId:
9606]}
Length = 131
Score = 24.7 bits (53), Expect = 0.78
Identities = 9/30 (30%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Query: 16 ESSSDIMAPEGGTIKLVCKAKGYPRPHITW 45
ES ++ P GG+++L C A G+ +
Sbjct: 6 ESGGGLVKP-GGSLRLTCVASGFTFSDVWL 34
>d1ct8b1 b.1.1.1 (B:1-113) Immunoglobulin heavy chain variable
domain, VH {Mouse (Mus musculus), cluster 3.3 [TaxId:
10090]}
Length = 118
Score = 24.7 bits (53), Expect = 0.79
Identities = 9/30 (30%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Query: 16 ESSSDIMAPEGGTIKLVCKAKGYPRPHITW 45
ES + ++ P G ++KL CK G+
Sbjct: 6 ESGAVLVKP-GASVKLSCKTSGFTFSSSYI 34
>d1um5h1 b.1.1.1 (H:3-119) Immunoglobulin heavy chain variable
domain, VH {Mouse (Mus musculus), cluster 3.2 [TaxId:
10090]}
Length = 117
Score = 24.7 bits (53), Expect = 0.79
Identities = 9/30 (30%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Query: 16 ESSSDIMAPEGGTIKLVCKAKGYPRPHITW 45
+S ++ P GG++K+ CKA Y +
Sbjct: 5 QSGPVLVKP-GGSVKMSCKASEYTLTSYLF 33
>d1indh1 b.1.1.1 (H:1-114) Immunoglobulin heavy chain variable
domain, VH {Mouse (Mus musculus), cluster 2.2 [TaxId:
10090]}
Length = 114
Score = 24.7 bits (53), Expect = 0.81
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Query: 16 ESSSDIMAPEGGTIKLVCKAKGYPRPHITW 45
ES D + P GG++KL C A G+ T
Sbjct: 6 ESGGDSVKP-GGSLKLSCAASGFTLSGETM 34
>d1d5il1 b.1.1.1 (L:1-107) Immunoglobulin light chain kappa
variable domain, VL-kappa {Mouse (Mus musculus),
cluster 4 [TaxId: 10090]}
Length = 107
Score = 24.7 bits (53), Expect = 0.81
Identities = 15/62 (24%), Positives = 25/62 (40%), Gaps = 3/62 (4%)
Query: 11 DILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITW---KREDGQEIIIKEGNTMVPKSKD 67
DI +S S + A G + + CKA +++W K + +I N +V
Sbjct: 1 DIKMTQSPSSMYASLGERVTITCKASQDINSYLSWFQQKPGKSPKTLIYRANRLVDGVPS 60
Query: 68 IF 69
F
Sbjct: 61 RF 62
>d1zvya1 b.1.1.1 (A:2-125) Camelid IG heavy chain variable domain,
VHh {Camel (Camelus dromedarius) [TaxId: 9838]}
Length = 124
Score = 24.7 bits (53), Expect = 0.82
Identities = 8/32 (25%), Positives = 12/32 (37%), Gaps = 1/32 (3%)
Query: 16 ESSSDIMAPEGGTIKLVCKAKGYPRPHITWKR 47
ES + GG+++L C A G
Sbjct: 5 ESGGGSVQA-GGSLRLSCAASGSTDSIEYMTW 35
>d1yedb1 b.1.1.1 (B:1-113) Immunoglobulin heavy chain variable
domain, VH {Mouse (Mus musculus), cluster 3.2 [TaxId:
10090]}
Length = 124
Score = 24.7 bits (53), Expect = 0.83
Identities = 9/30 (30%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Query: 16 ESSSDIMAPEGGTIKLVCKAKGYPRPHITW 45
+S +++ P G ++KL CK GY
Sbjct: 6 QSGPELVRP-GTSVKLSCKTSGYIFTSYWI 34
>d3cx5j1 b.1.1.1 (J:1-127) Immunoglobulin heavy chain variable
domain, VH {Mouse (Mus musculus), cluster 7.1 [TaxId:
10090]}
Length = 127
Score = 24.7 bits (53), Expect = 0.83
Identities = 7/36 (19%), Positives = 13/36 (36%), Gaps = 1/36 (2%)
Query: 16 ESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQ 51
ES + ++ P ++ L C GY +
Sbjct: 6 ESGAGLVQP-SQSLSLTCSVTGYSITSGYYWNWIRL 40
>d1kgcd1 b.1.1.1 (D:2-117) T-cell antigen receptor {Human (Homo
sapiens), alpha-chain [TaxId: 9606]}
Length = 112
Score = 24.8 bits (53), Expect = 0.83
Identities = 6/32 (18%), Positives = 11/32 (34%), Gaps = 1/32 (3%)
Query: 17 SSSDIMAPEGGTIKLVCKAKGY-PRPHITWKR 47
+ + + E + L C +I W R
Sbjct: 4 QPNSMESNEEEPVHLPCNHSTISGTDYIHWYR 35
>d2nxyd1 b.1.1.1 (D:3001-3128) Immunoglobulin heavy chain variable
domain, VH {Human (Homo sapiens), cluster 1 [TaxId:
9606]}
Length = 128
Score = 24.7 bits (53), Expect = 0.84
Identities = 9/30 (30%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 16 ESSSDIMAPEGGTIKLVCKAKGYPRPHITW 45
ES +++ P G ++K+ CKA G ++
Sbjct: 6 ESGAEVKKP-GSSVKVSCKASGDTFIRYSF 34
>d2fbjh1 b.1.1.1 (H:1-118) Immunoglobulin heavy chain variable
domain, VH {Mouse (Mus musculus), cluster 2.2 [TaxId:
10090]}
Length = 118
Score = 24.7 bits (53), Expect = 0.84
Identities = 10/32 (31%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Query: 16 ESSSDIMAPEGGTIKLVCKAKGYPRPHITWKR 47
ES ++ P GG++KL C A G+
Sbjct: 6 ESGGGLVQP-GGSLKLSCAASGFDFSKYWMSW 36
>d1b2wh1 b.1.1.1 (H:1-117) Immunoglobulin heavy chain variable
domain, VH {Engineered (including hybrid species)}
Length = 117
Score = 24.6 bits (53), Expect = 0.86
Identities = 9/30 (30%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Query: 16 ESSSDIMAPEGGTIKLVCKAKGYPRPHITW 45
+S ++ P G ++KL C A GY
Sbjct: 6 QSGGGVVQP-GRSLKLSCLASGYIFTSSWI 34
>d2b1hh1 b.1.1.1 (H:1-113) Immunoglobulin heavy chain variable
domain, VH {Engineered (including hybrid species)}
Length = 124
Score = 24.7 bits (53), Expect = 0.89
Identities = 6/30 (20%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Query: 16 ESSSDIMAPEGGTIKLVCKAKGYPRPHITW 45
+S +++ G ++K+ C+ GY
Sbjct: 6 QSGAEVKKS-GESLKISCQTSGYSFSDYWI 34
>d1nfdf1 b.1.1.1 (F:1-114) Immunoglobulin heavy chain variable
domain, VH {Hamster (Cricetulus griseus) [TaxId:
10029]}
Length = 121
Score = 24.6 bits (53), Expect = 0.89
Identities = 9/30 (30%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Query: 16 ESSSDIMAPEGGTIKLVCKAKGYPRPHITW 45
ES D++ P G ++K+ C A G+
Sbjct: 6 ESGGDLVQP-GSSLKVSCAASGFTFSDFWM 34
>d1ad9b1 b.1.1.1 (B:1-113) Immunoglobulin heavy chain variable
domain, VH {Engineered (including hybrid species)}
Length = 120
Score = 24.7 bits (53), Expect = 0.89
Identities = 9/30 (30%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Query: 16 ESSSDIMAPEGGTIKLVCKAKGYPRPHITW 45
+S +++ P G ++K+ CKA GY
Sbjct: 6 QSGAEVKKP-GSSVKVSCKASGYTFTDYYI 34
>d1mexl1 b.1.1.1 (L:1-107) Immunoglobulin light chain kappa
variable domain, VL-kappa {Mouse (Mus musculus),
cluster 4 [TaxId: 10090]}
Length = 107
Score = 24.7 bits (53), Expect = 0.92
Identities = 8/35 (22%), Positives = 15/35 (42%)
Query: 11 DILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITW 45
DI+ +S + G + + CKA ++ W
Sbjct: 1 DIVMTQSQKFMSTSLGNRVSVTCKASQNVGTNVAW 35
>d1rihh1 b.1.1.1 (H:1-113) Immunoglobulin heavy chain variable
domain, VH {Mouse (Mus musculus), cluster 3.2 [TaxId:
10090]}
Length = 125
Score = 24.7 bits (53), Expect = 0.93
Identities = 8/30 (26%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Query: 16 ESSSDIMAPEGGTIKLVCKAKGYPRPHITW 45
+S +++ P G ++K+ C+A GY
Sbjct: 6 QSGNELAKP-GASMKMSCRASGYSFTSYWI 34
>d1rzfh1 b.1.1.1 (H:2-113) Immunoglobulin heavy chain variable
domain, VH {Human (Homo sapiens), cluster 1 [TaxId:
9606]}
Length = 133
Score = 24.7 bits (53), Expect = 0.94
Identities = 7/30 (23%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Query: 16 ESSSDIMAPEGGTIKLVCKAKGYPRPHITW 45
+S +++ P G ++K+ C+A G +
Sbjct: 5 QSGAEVNKP-GSSVKVSCQASGATLNSHAF 33
>d1bz7b1 b.1.1.1 (B:1-122) Immunoglobulin heavy chain variable
domain, VH {Mouse (Mus musculus), cluster 2.2 [TaxId:
10090]}
Length = 122
Score = 24.7 bits (53), Expect = 0.98
Identities = 10/30 (33%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Query: 16 ESSSDIMAPEGGTIKLVCKAKGYPRPHITW 45
ES ++ P GG+ KL C A G+ +
Sbjct: 6 ESGGGLVQP-GGSRKLSCAASGFTFSNFGM 34
>d1qnzh_ b.1.1.1 (H:) Immunoglobulin heavy chain variable domain,
VH {Mouse (Mus musculus), cluster 3.2 [TaxId: 10090]}
Length = 119
Score = 24.7 bits (53), Expect = 1.00
Identities = 9/30 (30%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 16 ESSSDIMAPEGGTIKLVCKAKGYPRPHITW 45
+S ++++ P G ++K+ CKA GY
Sbjct: 6 QSGAELVKP-GASVKMSCKASGYTFTTYPI 34
>d2nxyb2 b.1.1.3 (B:1098-1181) CD4 C2-set domains {Human (Homo
sapiens) [TaxId: 9606]}
Length = 84
Score = 24.3 bits (51), Expect = 1.00
Identities = 7/53 (13%), Positives = 20/53 (37%)
Query: 17 SSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIIIKEGNTMVPKSKDIF 69
++SD +G ++ L ++ P + + G+ I + ++
Sbjct: 5 ANSDTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKNIQGGKTLSVSQLELQDS 57
>d1ieha_ b.1.1.1 (A:) Camelid IG heavy chain variable domain, VHh
{Llama (Lama glama) [TaxId: 9844]}
Length = 135
Score = 24.6 bits (53), Expect = 1.0
Identities = 7/30 (23%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Query: 16 ESSSDIMAPEGGTIKLVCKAKGYPRPHITW 45
S ++ P GG++++ C A G+
Sbjct: 6 ASGGGLVQP-GGSLRVSCAASGFTFSSYHM 34
>d1pg7x1 b.1.1.1 (X:1-113) Immunoglobulin heavy chain variable
domain, VH {Mouse (Mus musculus), cluster 3.2 [TaxId:
10090]}
Length = 120
Score = 24.3 bits (52), Expect = 1.0
Identities = 9/30 (30%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Query: 16 ESSSDIMAPEGGTIKLVCKAKGYPRPHITW 45
+S +++ P G ++K+ CKA GY
Sbjct: 6 QSGPELVKP-GASVKISCKASGYSFTGHLL 34
>d1q9rb1 b.1.1.1 (B:1-111) Immunoglobulin heavy chain variable
domain, VH {Mouse (Mus musculus), cluster 1 [TaxId:
10090]}
Length = 122
Score = 24.3 bits (52), Expect = 1.1
Identities = 7/32 (21%), Positives = 13/32 (40%), Gaps = 1/32 (3%)
Query: 16 ESSSDIMAPEGGTIKLVCKAKGYPRPHITWKR 47
ES ++ GG+++L C G+
Sbjct: 6 ESGGGLVQS-GGSLRLSCATSGFTFTDYYMSW 36
>d2psba1 c.153.1.1 (A:13-308) Uncharacterized protein YerB {Bacillus
subtilis [TaxId: 1423]}
Length = 296
Score = 24.6 bits (53), Expect = 1.1
Identities = 5/20 (25%), Positives = 12/20 (60%)
Query: 43 ITWKREDGQEIIIKEGNTMV 62
WK+ +G+ + +K+G +
Sbjct: 256 TDWKQVNGRIVPVKDGKWLP 275
>d1eapb1 b.1.1.1 (B:1-124) Immunoglobulin heavy chain variable
domain, VH {Mouse (Mus musculus), cluster 3.2 [TaxId:
10090]}
Length = 119
Score = 24.3 bits (52), Expect = 1.1
Identities = 10/30 (33%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 16 ESSSDIMAPEGGTIKLVCKAKGYPRPHITW 45
ES ++++ P G ++K+ CKA GY
Sbjct: 6 ESGTELVKP-GASVKISCKASGYISTDHAI 34
>d2dava1 b.1.1.4 (A:8-120) Myosin-binding protein C, slow-type
{Human (Homo sapiens) [TaxId: 9606]}
Length = 113
Score = 24.2 bits (51), Expect = 1.2
Identities = 10/51 (19%), Positives = 16/51 (31%), Gaps = 3/51 (5%)
Query: 19 SDIMAPEGGTIKLVCKAKGYP---RPHITWKREDGQEIIIKEGNTMVPKSK 66
G I + K K +P I W + ++ K G + K
Sbjct: 8 QGGTVKVGEDITFIAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQLKET 58
>d1dlfh_ b.1.1.1 (H:) Immunoglobulin heavy chain variable domain,
VH {Mouse (Mus musculus), cluster 1 [TaxId: 10090]}
Length = 120
Score = 24.3 bits (52), Expect = 1.2
Identities = 10/33 (30%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Query: 15 EESSSDIMAPEGGTIKLVCKAKGYPRPHITWKR 47
EES ++ P GG++KL C G+
Sbjct: 5 EESGGGLVQP-GGSMKLSCATSGFTFSDAWMDW 36
>d1k5nb_ b.1.1.2 (B:) beta2-microglobulin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 100
Score = 24.2 bits (52), Expect = 1.2
Identities = 6/31 (19%), Positives = 10/31 (32%), Gaps = 2/31 (6%)
Query: 23 APEGGTIKLVCKAKGYPRPHI--TWKREDGQ 51
A G + L C G+ I + +
Sbjct: 16 AENGKSNFLNCYVSGFHPSDIEVDLLKNGER 46
>d1ol0a_ b.1.1.1 (A:) Immunoglobulin heavy chain variable domain,
VH {Engineered (including hybrid species)}
Length = 121
Score = 24.3 bits (52), Expect = 1.2
Identities = 9/32 (28%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Query: 16 ESSSDIMAPEGGTIKLVCKAKGYPRPHITWKR 47
ES ++ P GG+++L C A G+
Sbjct: 6 ESGGGLVQP-GGSLRLSCAASGFTFSSYAMSW 36
>d2gj6d1 b.1.1.1 (D:15-114) T-cell antigen receptor {Mouse (Mus
musculus), beta-chain [TaxId: 10090]}
Length = 94
Score = 24.1 bits (51), Expect = 1.2
Identities = 4/20 (20%), Positives = 4/20 (20%)
Query: 26 GGTIKLVCKAKGYPRPHITW 45
G L C W
Sbjct: 1 GAIASLNCTYSDRGSQSFFW 20
>d1op3h1 b.1.1.1 (H:1-115) Immunoglobulin heavy chain variable
domain, VH {Engineered (including hybrid species)}
Length = 125
Score = 24.3 bits (52), Expect = 1.2
Identities = 7/32 (21%), Positives = 12/32 (37%), Gaps = 1/32 (3%)
Query: 16 ESSSDIMAPEGGTIKLVCKAKGYPRPHITWKR 47
ES ++ GG++ L C + T
Sbjct: 6 ESGGGLVKA-GGSLILSCGVSNFRISAHTMNW 36
>d1tjgh1 b.1.1.1 (H:1-113) Immunoglobulin heavy chain variable
domain, VH {Engineered (including hybrid species)}
Length = 132
Score = 24.3 bits (52), Expect = 1.3
Identities = 7/31 (22%), Positives = 12/31 (38%), Gaps = 1/31 (3%)
Query: 15 EESSSDIMAPEGGTIKLVCKAKGYPRPHITW 45
+ES ++ P T+ L C G+
Sbjct: 5 KESGPPLVKP-TQTLTLTCSFSGFSLSDFGV 34
>d2fcba1 b.1.1.4 (A:6-90) Fc gamma receptor ectodomain (CD32)
{Human (Homo sapiens), IIb [TaxId: 9606]}
Length = 85
Score = 23.8 bits (50), Expect = 1.3
Identities = 8/55 (14%), Positives = 16/55 (29%)
Query: 9 PPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEIIIKEGNTMVP 63
PP + + I + ++ L C+ P +G I +
Sbjct: 2 PPKAVLKLEPQWINVLQEDSVTLTCRGTHSPESDSIQWFHNGNLIPTHTQPSYRF 56
>d1j05b_ b.1.1.1 (B:) Immunoglobulin heavy chain variable domain,
VH {Mouse (Mus musculus), cluster 3.2 [TaxId: 10090]}
Length = 121
Score = 24.3 bits (52), Expect = 1.3
Identities = 8/30 (26%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Query: 16 ESSSDIMAPEGGTIKLVCKAKGYPRPHITW 45
+S ++++ P G ++KL C A G+
Sbjct: 6 QSGAELVEP-GASVKLSCTASGFNIKDTYM 34
>d1lk2b_ b.1.1.2 (B:) beta2-microglobulin {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 99
Score = 23.8 bits (51), Expect = 1.3
Identities = 5/27 (18%), Positives = 7/27 (25%), Gaps = 2/27 (7%)
Query: 23 APEGGTIKLVCKAKG-YPRP-HITWKR 47
G L C +P I +
Sbjct: 15 PENGKPNILNCYVTQFHPPHIEIQMLK 41
>d1hkfa_ b.1.1.1 (A:) NK cell activating receptor NKP44 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 108
Score = 24.1 bits (51), Expect = 1.3
Identities = 4/29 (13%), Positives = 10/29 (34%), Gaps = 2/29 (6%)
Query: 21 IMAPEGGTIKLVCKAKGYP--RPHITWKR 47
+ + G T+ + C+ W +
Sbjct: 6 LQSVAGQTLTVRCQYPPTGSLYEKKGWCK 34
>d2ak4d1 b.1.1.1 (D:1-116) T-cell antigen receptor {Human (Homo
sapiens), alpha-chain [TaxId: 9606]}
Length = 114
Score = 24.0 bits (51), Expect = 1.3
Identities = 5/32 (15%), Positives = 13/32 (40%), Gaps = 1/32 (3%)
Query: 17 SSSDIMAPEGGTIKLVCKAKG-YPRPHITWKR 47
+ ++I E + L C + ++ W +
Sbjct: 6 AQTEISVVEKEDVTLDCVYETRDTTYYLFWYK 37
>d1lo4h1 b.1.1.1 (H:1-118) Immunoglobulin heavy chain variable
domain, VH {Mouse (Mus musculus), cluster 2.1 [TaxId:
10090]}
Length = 118
Score = 24.3 bits (52), Expect = 1.3
Identities = 9/32 (28%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Query: 16 ESSSDIMAPEGGTIKLVCKAKGYPRPHITWKR 47
E+ D++ P GG++ L C+A G+
Sbjct: 6 ETGGDLVKP-GGSLTLSCEASGFTLRTYGMSW 36
>d2agjh1 b.1.1.1 (H:1-120) Immunoglobulin heavy chain variable
domain, VH {Engineered (including hybrid species)}
Length = 120
Score = 24.0 bits (51), Expect = 1.3
Identities = 7/31 (22%), Positives = 12/31 (38%), Gaps = 1/31 (3%)
Query: 15 EESSSDIMAPEGGTIKLVCKAKGYPRPHITW 45
+ES ++ P T+ L C G+
Sbjct: 5 KESGPTLVKP-TQTLTLTCTFSGFSLTTTGE 34
>d1mqkh_ b.1.1.1 (H:) Immunoglobulin heavy chain variable domain,
VH {Mouse (Mus musculus), cluster 2.2 [TaxId: 10090]}
Length = 123
Score = 24.3 bits (52), Expect = 1.4
Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Query: 16 ESSSDIMAPEGGTIKLVCKAKGYPRPHITWKR 47
ES D++ P GG++KL C A G+ T
Sbjct: 6 ESGGDLVQP-GGSLKLSCAASGFTFSSYTMSW 36
>d1kxvc_ b.1.1.1 (C:) Camelid IG heavy chain variable domain, VHh
{Camel (Camelus dromedarius) [TaxId: 9838]}
Length = 119
Score = 23.9 bits (51), Expect = 1.4
Identities = 8/32 (25%), Positives = 12/32 (37%), Gaps = 1/32 (3%)
Query: 16 ESSSDIMAPEGGTIKLVCKAKGYPRPHITWKR 47
ES + GG+++L C A G
Sbjct: 5 ESGGGTVPA-GGSLRLSCAASGNTLCTYDMSW 35
>d2atpb1 b.1.1.1 (B:1-115) CD8 {Mouse (Mus musculus), beta-chain
[TaxId: 10090]}
Length = 115
Score = 24.0 bits (51), Expect = 1.4
Identities = 5/22 (22%), Positives = 10/22 (45%)
Query: 17 SSSDIMAPEGGTIKLVCKAKGY 38
+ S ++ T K+ C+ K
Sbjct: 4 TPSSLLVQTNHTAKMSCEVKSI 25
>d1dfbh1 b.1.1.1 (H:1-126) Immunoglobulin heavy chain variable
domain, VH {Human (Homo sapiens), cluster 3 [TaxId:
9606]}
Length = 126
Score = 23.9 bits (51), Expect = 1.4
Identities = 8/32 (25%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Query: 16 ESSSDIMAPEGGTIKLVCKAKGYPRPHITWKR 47
ES ++ P G +++L C A G+
Sbjct: 6 ESGGGLVQP-GRSLRLSCAASGFTFNDYAMHW 36
>d1rjca1 b.1.1.1 (A:2-127) Camelid IG heavy chain variable domain,
VHh {Camel (Camelus dromedarius) [TaxId: 9838]}
Length = 126
Score = 23.9 bits (51), Expect = 1.4
Identities = 5/32 (15%), Positives = 9/32 (28%), Gaps = 1/32 (3%)
Query: 16 ESSSDIMAPEGGTIKLVCKAKGYPRPHITWKR 47
S + G +++L C G
Sbjct: 5 ASGGGSVQA-GQSLRLSCATSGATSSSNCMGW 35
>d1i3ua_ b.1.1.1 (A:) Camelid IG heavy chain variable domain, VHh
{Llama (Lama glama) [TaxId: 9844]}
Length = 127
Score = 24.0 bits (51), Expect = 1.4
Identities = 8/32 (25%), Positives = 13/32 (40%), Gaps = 1/32 (3%)
Query: 16 ESSSDIMAPEGGTIKLVCKAKGYPRPHITWKR 47
ES ++ G ++KL C+A G
Sbjct: 6 ESGGGLVQA-GDSLKLSCEASGDSIGTYVIGW 36
>d1c5db1 b.1.1.1 (B:1-117) Immunoglobulin heavy chain variable
domain, VH {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 117
Score = 23.9 bits (51), Expect = 1.4
Identities = 8/32 (25%), Positives = 12/32 (37%), Gaps = 1/32 (3%)
Query: 16 ESSSDIMAPEGGTIKLVCKAKGYPRPHITWKR 47
ES ++ P T+ L C G+P
Sbjct: 6 ESGPGLVQP-SQTLSLTCTVSGFPLTTNGVSW 36
>d2avga1 b.1.1.4 (A:1-110) Cardiac myosin binding protein C,
different domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 110
Score = 23.8 bits (50), Expect = 1.6
Identities = 11/60 (18%), Positives = 18/60 (30%), Gaps = 3/60 (5%)
Query: 10 PDILNEESSSDIMAPEGGTIKLVCKAKGYP---RPHITWKREDGQEIIIKEGNTMVPKSK 66
P L D GG+I + G P + W + ++ K G +
Sbjct: 3 PIGLFVMRPQDGEVTVGGSITFSARVAGASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDS 62
>d1etzb1 b.1.1.1 (B:1-126) Immunoglobulin heavy chain variable
domain, VH {Mouse (Mus musculus), cluster 6 [TaxId:
10090]}
Length = 126
Score = 23.9 bits (51), Expect = 1.7
Identities = 8/31 (25%), Positives = 12/31 (38%), Gaps = 1/31 (3%)
Query: 15 EESSSDIMAPEGGTIKLVCKAKGYPRPHITW 45
+ES I+ P T+ L C G+
Sbjct: 5 KESGPGILQP-SQTLSLTCSFSGFSLSTSGM 34
>d1r0ah1 b.1.1.1 (H:1-123) Immunoglobulin heavy chain variable
domain, VH {Mouse (Mus musculus), cluster 6 [TaxId:
10090]}
Length = 123
Score = 23.9 bits (51), Expect = 1.8
Identities = 7/30 (23%), Positives = 10/30 (33%), Gaps = 1/30 (3%)
Query: 16 ESSSDIMAPEGGTIKLVCKAKGYPRPHITW 45
ES I+ P +L C G+
Sbjct: 6 ESGPGIVQP-SQPFRLTCTFSGFSLSTSGI 34
>d1pkoa_ b.1.1.1 (A:) Myelin oligodendrocyte glycoprotein (MOG)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 126
Score = 23.8 bits (50), Expect = 2.0
Identities = 8/46 (17%), Positives = 11/46 (23%), Gaps = 8/46 (17%)
Query: 2 GYLDVVVPPDILNEESSSDIMAPEGGTIKLVCKAKGYPRPHITWKR 47
G V+ P I A G +L C+
Sbjct: 1 GQFRVIGPGH--------PIRALVGDEAELPCRISPGKNATGMEVG 38
>d1lp9e1 b.1.1.1 (E:0-117) T-cell antigen receptor {Mouse (Mus
musculus), alpha-chain [TaxId: 10090]}
Length = 115
Score = 23.7 bits (50), Expect = 2.0
Identities = 6/31 (19%), Positives = 12/31 (38%)
Query: 15 EESSSDIMAPEGGTIKLVCKAKGYPRPHITW 45
++ + EG + L C + P + W
Sbjct: 5 TQTEGLVTLTEGLPVMLNCTYQSTYSPFLFW 35
>d1ai1h1 b.1.1.1 (H:1-112) Immunoglobulin heavy chain variable
domain, VH {Mouse (Mus musculus), cluster 7.3 [TaxId:
10090]}
Length = 120
Score = 23.6 bits (50), Expect = 2.0
Identities = 6/24 (25%), Positives = 12/24 (50%), Gaps = 1/24 (4%)
Query: 15 EESSSDIMAPEGGTIKLVCKAKGY 38
+ES ++ P ++ L C G+
Sbjct: 5 QESGPAVIKP-SQSLSLTCIVSGF 27
>d1u3ha1 b.1.1.1 (A:2-116) T-cell antigen receptor {Mouse (Mus
musculus), alpha-chain [TaxId: 10090]}
Length = 110
Score = 23.7 bits (50), Expect = 2.1
Identities = 7/31 (22%), Positives = 11/31 (35%)
Query: 15 EESSSDIMAPEGGTIKLVCKAKGYPRPHITW 45
+S + EG T L C + + W
Sbjct: 3 RQSPQSLTVWEGETAILNCSYENSAFDYFPW 33
>d1a2yb_ b.1.1.1 (B:) Immunoglobulin heavy chain variable domain,
VH {Mouse (Mus musculus), cluster 5 [TaxId: 10090]}
Length = 116
Score = 23.5 bits (50), Expect = 2.2
Identities = 6/30 (20%), Positives = 12/30 (40%), Gaps = 1/30 (3%)
Query: 16 ESSSDIMAPEGGTIKLVCKAKGYPRPHITW 45
ES ++AP ++ + C G+
Sbjct: 6 ESGPGLVAP-SQSLSITCTVSGFSLTGYGV 34
>d7fabh1 b.1.1.1 (H:1-116) Immunoglobulin heavy chain variable
domain, VH {Human (Homo sapiens), cluster 2.1 [TaxId:
9606]}
Length = 116
Score = 23.5 bits (50), Expect = 2.2
Identities = 8/31 (25%), Positives = 12/31 (38%), Gaps = 1/31 (3%)
Query: 15 EESSSDIMAPEGGTIKLVCKAKGYPRPHITW 45
E+S ++ P T+ L C G W
Sbjct: 5 EQSGPGLVRP-SQTLSLTCTVSGTSFDDYYW 34
>d1sjva_ b.1.1.1 (A:) Camelid IG heavy chain variable domain, VHh
{Llama (Lama glama) [TaxId: 9844]}
Length = 107
Score = 23.5 bits (50), Expect = 2.2
Identities = 6/13 (46%), Positives = 8/13 (61%)
Query: 26 GGTIKLVCKAKGY 38
G ++KL C A G
Sbjct: 8 GESLKLSCAASGN 20
>d1a0ql1 b.1.1.1 (L:2-108) Immunoglobulin light chain kappa
variable domain, VL-kappa {Mouse (Mus musculus),
cluster 4 [TaxId: 10090]}
Length = 106
Score = 23.5 bits (50), Expect = 2.2
Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
Query: 17 SSSDIMAPEGGTIKLVCKAKGYPRPHITW---KREDGQEIIIKEGNTMVPKSKDIF 69
S S + A GG + + CKA + +I W K ++I +T++P F
Sbjct: 6 SPSSLSASLGGKVTITCKASQDIKKYIGWYQHKPGKQPRLLIHYTSTLLPGIPSRF 61
>d1hxma1 b.1.1.1 (A:1-120) T-cell antigen receptor {Human (Homo
sapiens), gamma-chain [TaxId: 9606]}
Length = 120
Score = 23.3 bits (49), Expect = 2.4
Identities = 5/22 (22%), Positives = 6/22 (27%)
Query: 17 SSSDIMAPEGGTIKLVCKAKGY 38
+ G L C KG
Sbjct: 7 EHQTVPVSIGVPATLRCSMKGE 28
>d1hxmb1 b.1.1.1 (B:1-123) T-cell antigen receptor {Human (Homo
sapiens), delta-chain [TaxId: 9606]}
Length = 123
Score = 23.2 bits (49), Expect = 2.6
Identities = 5/24 (20%), Positives = 7/24 (29%)
Query: 15 EESSSDIMAPEGGTIKLVCKAKGY 38
E+ T +L C G
Sbjct: 5 EQPQISSTKTLSKTARLECVVSGI 28
>d1op3k1 b.1.1.1 (K:2-107) Immunoglobulin light chain kappa
variable domain, VL-kappa {Engineered (including hybrid
species)}
Length = 106
Score = 23.1 bits (49), Expect = 2.6
Identities = 13/56 (23%), Positives = 23/56 (41%), Gaps = 3/56 (5%)
Query: 17 SSSDIMAPEGGTIKLVCKAKGYPRPHITW---KREDGQEIIIKEGNTMVPKSKDIF 69
S S + A G TI + C+A + W K +++I + +T+ F
Sbjct: 6 SPSTLSASVGDTITITCRASQSIETWLAWYQQKPGKAPKLLIYKASTLKTGVPSRF 61
>d2cdea1 b.1.1.1 (A:2-115) T-cell antigen receptor {Human (Homo
sapiens), beta-chain [TaxId: 9606]}
Length = 114
Score = 23.3 bits (49), Expect = 2.7
Identities = 8/31 (25%), Positives = 13/31 (41%)
Query: 15 EESSSDIMAPEGGTIKLVCKAKGYPRPHITW 45
E+S ++ EG L C P ++ W
Sbjct: 4 EQSPQSLIILEGKNCTLQCNYTVSPFSNLRW 34
>d2nxyb1 b.1.1.1 (B:1001-1097) CD4 V-set domains {Human (Homo
sapiens) [TaxId: 9606]}
Length = 97
Score = 23.2 bits (49), Expect = 2.8
Identities = 7/27 (25%), Positives = 12/27 (44%)
Query: 21 IMAPEGGTIKLVCKAKGYPRPHITWKR 47
++ +G T++L C A WK
Sbjct: 4 VLGKKGDTVELTCTASQKKSIQFHWKN 30
>d1smoa_ b.1.1.1 (A:) TREM-1 (triggering receptor expressed on
myeloid cells 1) {Human (Homo sapiens) [TaxId: 9606]}
Length = 113
Score = 23.2 bits (49), Expect = 3.2
Identities = 4/21 (19%), Positives = 6/21 (28%)
Query: 25 EGGTIKLVCKAKGYPRPHITW 45
EG T+ + C
Sbjct: 13 EGQTLDVKCDYTLEKFASSQK 33
>d1mjuh2 b.1.1.2 (H:114-230) Immunoglobulin heavy chain gamma
constant domain 1, CH1-gamma {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 102
Score = 22.7 bits (48), Expect = 3.5
Identities = 8/28 (28%), Positives = 11/28 (39%), Gaps = 2/28 (7%)
Query: 24 PEGGTIKLVCKAKGYPRPHIT--WKRED 49
G ++ L C KGY +T W
Sbjct: 18 TSGSSVTLGCLVKGYFPEPVTLTWNSGS 45
>d1rhfa2 b.1.1.4 (A:98-182) Tyrosine-protein kinase receptor
tyro3, second domain {Human (Homo sapiens) [TaxId:
9606]}
Length = 85
Score = 22.6 bits (47), Expect = 4.0
Identities = 8/48 (16%), Positives = 12/48 (25%), Gaps = 2/48 (4%)
Query: 19 SDIMAPEGGTIKL-VCKAKGYPRPHITWKREDGQEIIIKEGNTMVPKS 65
D+ P +L I W R +I + V
Sbjct: 9 KDLAVPPNAPFQLSCEAVGPPEPVTIVWWR-GTTKIGGPAPSPSVLNV 55
>d3c8ya2 d.15.4.2 (A:1-126) Fe-only hydrogenase, N-terminal domain
{Clostridium pasteurianum [TaxId: 1501]}
Length = 126
Score = 22.6 bits (48), Expect = 4.2
Identities = 4/34 (11%), Positives = 8/34 (23%)
Query: 20 DIMAPEGGTIKLVCKAKGYPRPHITWKREDGQEI 53
E TI + + + +I
Sbjct: 10 QFNTDEDTTILKFARDNNIDISALCFLNNCNNDI 43
>d1lk3l1 b.1.1.1 (L:1-106) Immunoglobulin light chain kappa
variable domain, VL-kappa {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 106
Score = 22.3 bits (47), Expect = 6.6
Identities = 5/23 (21%), Positives = 8/23 (34%)
Query: 23 APEGGTIKLVCKAKGYPRPHITW 45
G + + CKA + W
Sbjct: 12 VSPGEKLTISCKASESVTSRMHW 34
>d2qv7a1 e.52.1.2 (A:1-312) Diacylglycerol kinase DgkB
{Staphylococcus aureus [TaxId: 1280]}
Length = 312
Score = 22.3 bits (46), Expect = 7.4
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 4 LDVVVPPDILNEESS 18
+DV P DI+NEE
Sbjct: 289 IDVFAPNDIVNEELI 303
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.315 0.138 0.414
Gapped
Lambda K H
0.267 0.0519 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 283,368
Number of extensions: 11019
Number of successful extensions: 180
Number of sequences better than 10.0: 1
Number of HSP's gapped: 179
Number of HSP's successfully gapped: 140
Length of query: 69
Length of database: 2,407,596
Length adjustment: 37
Effective length of query: 32
Effective length of database: 1,899,586
Effective search space: 60786752
Effective search space used: 60786752
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 47 (22.4 bits)