BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4609
(242 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5U203|UBE2F_RAT NEDD8-conjugating enzyme UBE2F OS=Rattus norvegicus GN=Ube2f PE=2
SV=2
Length = 185
Score = 239 bits (609), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 110/176 (62%), Positives = 135/176 (76%), Gaps = 4/176 (2%)
Query: 61 MITLSKKLK----MQNEGCDIVDKSSNKRIFIRDKLLIKEVQEMEQNLPNTCKTKFTNPN 116
M+TL+ KLK ++ S +R+ +RDKLL+KEV E+E NLP TCK F +PN
Sbjct: 1 MLTLASKLKRDDGLKGSRASASTSDSTRRVSVRDKLLVKEVAELEANLPCTCKVHFPDPN 60
Query: 117 HLHEFTIVISPDEGYWRGGKFLFSVSVPEEYNMAPPKVKCLTKLWHPNINENGDICLSLL 176
LH F + +SPDEGY++GGKF F VP+ YNM PPKVKCLTK+WHPNI E G+ICLSLL
Sbjct: 61 KLHCFQLTVSPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTKIWHPNITETGEICLSLL 120
Query: 177 RQNSIDGLGWAPTRKLKDVIWGLNSLFTDLLNFDDPLNIEAAEMYQKNKELFRERA 232
R++SIDG GWAPTR LKDV+WGLNSLFTDLLNFDDPLNIEAAE + ++KE FR++
Sbjct: 121 REHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRDKEDFRDKV 176
>sp|Q9CY34|UB2FA_MOUSE NEDD8-conjugating enzyme UBE2F OS=Mus musculus GN=Ube2f PE=1 SV=1
Length = 185
Score = 238 bits (608), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 110/176 (62%), Positives = 135/176 (76%), Gaps = 4/176 (2%)
Query: 61 MITLSKKLK----MQNEGCDIVDKSSNKRIFIRDKLLIKEVQEMEQNLPNTCKTKFTNPN 116
M+TL+ KLK ++ S +R+ +RDKLL+KEV E+E NLP TCK F +PN
Sbjct: 1 MLTLASKLKRDDGLKGSRTSASTSDSTRRVSVRDKLLVKEVAELEANLPCTCKVHFPDPN 60
Query: 117 HLHEFTIVISPDEGYWRGGKFLFSVSVPEEYNMAPPKVKCLTKLWHPNINENGDICLSLL 176
LH F + +SPDEGY++GGKF F VP+ YNM PPKVKCLTK+WHPNI E G+ICLSLL
Sbjct: 61 KLHCFQLTVSPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTKIWHPNITETGEICLSLL 120
Query: 177 RQNSIDGLGWAPTRKLKDVIWGLNSLFTDLLNFDDPLNIEAAEMYQKNKELFRERA 232
R++SIDG GWAPTR LKDV+WGLNSLFTDLLNFDDPLNIEAAE + ++KE FR++
Sbjct: 121 REHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRDKEDFRDKV 176
>sp|Q969M7|UBE2F_HUMAN NEDD8-conjugating enzyme UBE2F OS=Homo sapiens GN=UBE2F PE=1 SV=1
Length = 185
Score = 236 bits (603), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 109/176 (61%), Positives = 134/176 (76%), Gaps = 4/176 (2%)
Query: 61 MITLSKKLK----MQNEGCDIVDKSSNKRIFIRDKLLIKEVQEMEQNLPNTCKTKFTNPN 116
M+TL+ KLK ++ S +R+ +RDKLL+KEV E+E NLP TCK F +PN
Sbjct: 1 MLTLASKLKRDDGLKGSRTAATASDSTRRVSVRDKLLVKEVAELEANLPCTCKVHFPDPN 60
Query: 117 HLHEFTIVISPDEGYWRGGKFLFSVSVPEEYNMAPPKVKCLTKLWHPNINENGDICLSLL 176
LH F + ++PDEGY++GGKF F VP+ YNM PPKVKCLTK+WHPNI E G+ICLSLL
Sbjct: 61 KLHCFQLTVTPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTKIWHPNITETGEICLSLL 120
Query: 177 RQNSIDGLGWAPTRKLKDVIWGLNSLFTDLLNFDDPLNIEAAEMYQKNKELFRERA 232
R++SIDG GWAPTR LKDV+WGLNSLFTDLLNFDDPLNIEAAE + ++KE FR +
Sbjct: 121 REHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRDKEDFRNKV 176
>sp|Q1RMW1|UBE2F_BOVIN NEDD8-conjugating enzyme UBE2F OS=Bos taurus GN=UBE2F PE=2 SV=1
Length = 185
Score = 235 bits (600), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 107/176 (60%), Positives = 134/176 (76%), Gaps = 4/176 (2%)
Query: 61 MITLSKKLK----MQNEGCDIVDKSSNKRIFIRDKLLIKEVQEMEQNLPNTCKTKFTNPN 116
M+TL+ KLK ++ S +R+ +RD+LL+KEV E+E NLP TCK F +PN
Sbjct: 1 MLTLASKLKRDDGLKGSRASATASDSTRRVSVRDRLLVKEVAELEANLPCTCKVHFPDPN 60
Query: 117 HLHEFTIVISPDEGYWRGGKFLFSVSVPEEYNMAPPKVKCLTKLWHPNINENGDICLSLL 176
LH F + ++PDEGY++GGKF F VP+ YNM PPKVKCLT++WHPNI E G+ICLSLL
Sbjct: 61 KLHCFQLTVTPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTRIWHPNITETGEICLSLL 120
Query: 177 RQNSIDGLGWAPTRKLKDVIWGLNSLFTDLLNFDDPLNIEAAEMYQKNKELFRERA 232
R++SIDG GWAPTR LKDV+WGLNSLFTDLLNFDDPLNIEAAE + ++KE FR +
Sbjct: 121 REHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRDKEDFRNKV 176
>sp|Q5ZKX6|UBE2F_CHICK NEDD8-conjugating enzyme UBE2F OS=Gallus gallus GN=UBE2F PE=2 SV=1
Length = 185
Score = 233 bits (593), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 110/177 (62%), Positives = 137/177 (77%), Gaps = 6/177 (3%)
Query: 61 MITLSKKLKMQNEGCDIVDKS-----SNKRIFIRDKLLIKEVQEMEQNLPNTCKTKFTNP 115
M+TL+ KLK +++G S S +R+ +RDKLL+KEV E+E NLP TCK F +P
Sbjct: 1 MLTLASKLK-RDDGVRGPRASNPASDSTRRVSVRDKLLVKEVAELEANLPCTCKVNFPDP 59
Query: 116 NHLHEFTIVISPDEGYWRGGKFLFSVSVPEEYNMAPPKVKCLTKLWHPNINENGDICLSL 175
N LH F + + PDEGY++GGKF F + VP+ YNM PPKVKCLT++WHPNI E G+ICLSL
Sbjct: 60 NKLHYFQLTVIPDEGYYQGGKFQFEIEVPDAYNMVPPKVKCLTRIWHPNITETGEICLSL 119
Query: 176 LRQNSIDGLGWAPTRKLKDVIWGLNSLFTDLLNFDDPLNIEAAEMYQKNKELFRERA 232
LR++SIDG GWAPTR LKDV+WGLNSLFTDLLNFDDPLNIEAAE + ++KE FR +
Sbjct: 120 LREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRDKEDFRNKV 176
>sp|Q6IRC7|UBE2F_XENLA NEDD8-conjugating enzyme UBE2F OS=Xenopus laevis GN=ube2f PE=2 SV=1
Length = 185
Score = 229 bits (585), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 106/176 (60%), Positives = 136/176 (77%), Gaps = 4/176 (2%)
Query: 61 MITLSKKLKMQN--EGCDIVDKS--SNKRIFIRDKLLIKEVQEMEQNLPNTCKTKFTNPN 116
M+TL+ KLK + +G + S +RI +RD+LL+KEV E+E NLP TCK F +PN
Sbjct: 1 MLTLASKLKRDDGVKGSRTTSTTLDSMRRISVRDRLLVKEVAELEANLPCTCKVNFPDPN 60
Query: 117 HLHEFTIVISPDEGYWRGGKFLFSVSVPEEYNMAPPKVKCLTKLWHPNINENGDICLSLL 176
LH F + +SPDE Y++GG+F F + VP+ YNM PPKVKCLT++WHPNI E G+ICLSLL
Sbjct: 61 KLHYFHLTVSPDESYYQGGRFQFEIEVPDAYNMVPPKVKCLTRIWHPNITETGEICLSLL 120
Query: 177 RQNSIDGLGWAPTRKLKDVIWGLNSLFTDLLNFDDPLNIEAAEMYQKNKELFRERA 232
R++SIDG GWAPTR LKDV+WGLNSLFTDLLNFDDPLNIEAAE + ++K+ +R +
Sbjct: 121 REHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRDKDEYRNKV 176
>sp|Q3UWQ3|UB2FB_MOUSE NEDD8-conjugating enzyme UBE2F-B OS=Mus musculus GN=Ube2fb PE=2
SV=1
Length = 185
Score = 228 bits (580), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 106/176 (60%), Positives = 132/176 (75%), Gaps = 4/176 (2%)
Query: 61 MITLSKKLK----MQNEGCDIVDKSSNKRIFIRDKLLIKEVQEMEQNLPNTCKTKFTNPN 116
M+TL+ KLK ++ + S +R +RDKLL+ EV E+E NLP TCK F +PN
Sbjct: 1 MLTLASKLKWDEDLKGSQTSVSTSDSTRRFSMRDKLLVTEVAELEANLPWTCKVHFPDPN 60
Query: 117 HLHEFTIVISPDEGYWRGGKFLFSVSVPEEYNMAPPKVKCLTKLWHPNINENGDICLSLL 176
LH F + +SPDEGY++GG F F + VP+ YNM PPKVKCLTK+WHPNI E G+ICLSLL
Sbjct: 61 KLHCFQLTVSPDEGYYQGGNFQFEIEVPDAYNMVPPKVKCLTKIWHPNITETGEICLSLL 120
Query: 177 RQNSIDGLGWAPTRKLKDVIWGLNSLFTDLLNFDDPLNIEAAEMYQKNKELFRERA 232
R++S DG GWAPTR LKDV+WGLNSLFTDLLNF DPLNIEAAE + ++KE FR++
Sbjct: 121 REHSADGTGWAPTRTLKDVVWGLNSLFTDLLNFYDPLNIEAAEHHLQDKEDFRDKV 176
>sp|Q6NY82|UBE2F_DANRE NEDD8-conjugating enzyme UBE2F OS=Danio rerio GN=ube2f PE=2 SV=1
Length = 185
Score = 227 bits (578), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 112/178 (62%), Positives = 135/178 (75%), Gaps = 6/178 (3%)
Query: 61 MITLSKKLKMQNEGCDI--VDKSSNK---RIFIRDKLLIKEVQEMEQNLPNTCKTKFTNP 115
M+TL+ KLK + EG SN R+ IRD+LLIKEV E+E NLP+TCK F +
Sbjct: 1 MLTLASKLKRE-EGVRAGRTPAGSNDAAHRVSIRDRLLIKEVAELEANLPSTCKVTFPDE 59
Query: 116 NHLHEFTIVISPDEGYWRGGKFLFSVSVPEEYNMAPPKVKCLTKLWHPNINENGDICLSL 175
N L F + ISPDEGY+ GGKF F + VPE YNM PPKVKCLT++WHPNI E G+ICLSL
Sbjct: 60 NKLCHFQLAISPDEGYYLGGKFQFEIEVPEAYNMVPPKVKCLTRIWHPNIAETGEICLSL 119
Query: 176 LRQNSIDGLGWAPTRKLKDVIWGLNSLFTDLLNFDDPLNIEAAEMYQKNKELFRERAR 233
LR++SIDG GWAPTR LKDV+WGLNSLFTDLLNFDDPLNI+AAE + ++KE FR + +
Sbjct: 120 LREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIDAAEHHLRDKEDFRNKVQ 177
>sp|Q5M8Y2|UBE2F_XENTR NEDD8-conjugating enzyme UBE2F OS=Xenopus tropicalis GN=ube2f PE=2
SV=1
Length = 185
Score = 223 bits (567), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 104/176 (59%), Positives = 134/176 (76%), Gaps = 4/176 (2%)
Query: 61 MITLSKKLK----MQNEGCDIVDKSSNKRIFIRDKLLIKEVQEMEQNLPNTCKTKFTNPN 116
M+TL+ KLK ++ S +R+ +RD+LL+KEV E+E NLP TCK F +PN
Sbjct: 1 MLTLASKLKRDDGVKGSRTSSTTSDSTRRVSVRDRLLVKEVAELEANLPCTCKVNFPDPN 60
Query: 117 HLHEFTIVISPDEGYWRGGKFLFSVSVPEEYNMAPPKVKCLTKLWHPNINENGDICLSLL 176
LH F + +SPDE Y++GG+F F + VP+ YNM PPKVKCLT++WHPNI E G+ICLSLL
Sbjct: 61 KLHYFHLTVSPDESYYQGGRFQFEIEVPDAYNMVPPKVKCLTRIWHPNITETGEICLSLL 120
Query: 177 RQNSIDGLGWAPTRKLKDVIWGLNSLFTDLLNFDDPLNIEAAEMYQKNKELFRERA 232
R++SIDG GWAPTR LKDV+WGLNSLFTDLLNFDDPLNIEAAE + ++K+ +R +
Sbjct: 121 REHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRDKDEYRNKV 176
>sp|Q9XVK5|UBC12_CAEEL NEDD8-conjugating enzyme ubc-12 OS=Caenorhabditis elegans GN=ubc-12
PE=2 SV=1
Length = 180
Score = 177 bits (449), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 87/177 (49%), Positives = 120/177 (67%), Gaps = 8/177 (4%)
Query: 61 MITLSKKLKMQNEGCDIVDKSSNKRIFIRDKLLIKEVQEMEQNLPNTCKT----KFTNPN 116
M L K++ NE ++ RI +RDKLL +E+Q++E L + + + + +
Sbjct: 1 MFNLQKRINGNNEDGRYLET----RIAVRDKLLAQELQQLETALRDQKQKLWHLEVPSTS 56
Query: 117 HLHEFTIVISPDEGYWRGGKFLFSVSVPEEYNMAPPKVKCLTKLWHPNINENGDICLSLL 176
LHE + ++P EG +RGGKF F ++VP EYN PP VKCLTK+WHPNINE+G ICLS+L
Sbjct: 57 CLHELELTVTPQEGIYRGGKFRFKITVPPEYNNVPPVVKCLTKVWHPNINEDGSICLSIL 116
Query: 177 RQNSIDGLGWAPTRKLKDVIWGLNSLFTDLLNFDDPLNIEAAEMYQKNKELFRERAR 233
RQNS+D GW PTR L DV+ GL SLF DL++F+D LNI+AA+M+ +N+E F R R
Sbjct: 117 RQNSLDQYGWRPTRNLTDVVHGLVSLFNDLMDFNDALNIQAAQMWSQNRESFNHRVR 173
>sp|P61082|UBC12_MOUSE NEDD8-conjugating enzyme Ubc12 OS=Mus musculus GN=Ube2m PE=2 SV=1
Length = 183
Score = 124 bits (312), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 63/154 (40%), Positives = 96/154 (62%), Gaps = 9/154 (5%)
Query: 80 KSSNKRIFIRDKLLIKEVQEMEQNLPNTCKTKFTNPNHLHEFTIVISPDEGYWRGGKFLF 139
K S+K+ + K++ E+ NLP TC F++P+ L F +VI PDEG+++ GKF+F
Sbjct: 21 KGSSKKASAAQLRIQKDINEL--NLPKTCDISFSDPDDLLNFKLVICPDEGFYKSGKFVF 78
Query: 140 SVSVPEEYNMAPPKVKCLTKLWHPNINENGDICLSLLRQNSIDGLGWAPTRKLKDVIWGL 199
S V + Y PPKVKC T ++HPNI+ G++CL++LR++ W P + +I+GL
Sbjct: 79 SFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILRED------WKPVLTINSIIYGL 132
Query: 200 NSLFTDLLNFDDPLNIEAAEMYQKNKELFRERAR 233
LF + N +DPLN EAAE+ Q N+ LF + +
Sbjct: 133 QYLFLE-PNPEDPLNKEAAEVLQNNRRLFEQNVQ 165
>sp|P61081|UBC12_HUMAN NEDD8-conjugating enzyme Ubc12 OS=Homo sapiens GN=UBE2M PE=1 SV=1
Length = 183
Score = 124 bits (312), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 63/154 (40%), Positives = 96/154 (62%), Gaps = 9/154 (5%)
Query: 80 KSSNKRIFIRDKLLIKEVQEMEQNLPNTCKTKFTNPNHLHEFTIVISPDEGYWRGGKFLF 139
K S+K+ + K++ E+ NLP TC F++P+ L F +VI PDEG+++ GKF+F
Sbjct: 21 KGSSKKASAAQLRIQKDINEL--NLPKTCDISFSDPDDLLNFKLVICPDEGFYKSGKFVF 78
Query: 140 SVSVPEEYNMAPPKVKCLTKLWHPNINENGDICLSLLRQNSIDGLGWAPTRKLKDVIWGL 199
S V + Y PPKVKC T ++HPNI+ G++CL++LR++ W P + +I+GL
Sbjct: 79 SFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILRED------WKPVLTINSIIYGL 132
Query: 200 NSLFTDLLNFDDPLNIEAAEMYQKNKELFRERAR 233
LF + N +DPLN EAAE+ Q N+ LF + +
Sbjct: 133 QYLFLE-PNPEDPLNKEAAEVLQNNRRLFEQNVQ 165
>sp|A3KN22|UBC12_BOVIN NEDD8-conjugating enzyme Ubc12 OS=Bos taurus GN=UBE2M PE=2 SV=1
Length = 183
Score = 124 bits (312), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 63/154 (40%), Positives = 96/154 (62%), Gaps = 9/154 (5%)
Query: 80 KSSNKRIFIRDKLLIKEVQEMEQNLPNTCKTKFTNPNHLHEFTIVISPDEGYWRGGKFLF 139
K S+K+ + K++ E+ NLP TC F++P+ L F +VI PDEG+++ GKF+F
Sbjct: 21 KGSSKKASAAQLRIQKDINEL--NLPKTCDISFSDPDDLLNFKLVICPDEGFYKSGKFVF 78
Query: 140 SVSVPEEYNMAPPKVKCLTKLWHPNINENGDICLSLLRQNSIDGLGWAPTRKLKDVIWGL 199
S V + Y PPKVKC T ++HPNI+ G++CL++LR++ W P + +I+GL
Sbjct: 79 SFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILRED------WKPVLTINSIIYGL 132
Query: 200 NSLFTDLLNFDDPLNIEAAEMYQKNKELFRERAR 233
LF + N +DPLN EAAE+ Q N+ LF + +
Sbjct: 133 QYLFLE-PNPEDPLNKEAAEVLQNNRRLFEQNVQ 165
>sp|Q6DCZ9|UBC12_XENLA NEDD8-conjugating enzyme Ubc12 OS=Xenopus laevis GN=ube2m PE=2 SV=1
Length = 183
Score = 124 bits (311), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 63/154 (40%), Positives = 98/154 (63%), Gaps = 9/154 (5%)
Query: 80 KSSNKRIFIRDKLLIKEVQEMEQNLPNTCKTKFTNPNHLHEFTIVISPDEGYWRGGKFLF 139
K S+K+ + K++ E+ NLP TC+ +F++ + L F +VI PDEG+++GGKF+F
Sbjct: 21 KGSSKKASAAQLRIQKDITEL--NLPKTCEIEFSDHDDLLNFKLVICPDEGFYKGGKFVF 78
Query: 140 SVSVPEEYNMAPPKVKCLTKLWHPNINENGDICLSLLRQNSIDGLGWAPTRKLKDVIWGL 199
S V + Y PPKVKC T ++HPNI+ G++CL++LR++ W P + +I+GL
Sbjct: 79 SFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILRED------WKPVLTINSIIYGL 132
Query: 200 NSLFTDLLNFDDPLNIEAAEMYQKNKELFRERAR 233
LF + N +DPLN EAAE+ Q N+ LF + +
Sbjct: 133 QYLFLE-PNPEDPLNKEAAEVLQNNRRLFEQNVQ 165
>sp|Q6P8D9|UBC12_XENTR NEDD8-conjugating enzyme Ubc12 OS=Xenopus tropicalis GN=ube2m PE=2
SV=1
Length = 183
Score = 124 bits (311), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 63/154 (40%), Positives = 98/154 (63%), Gaps = 9/154 (5%)
Query: 80 KSSNKRIFIRDKLLIKEVQEMEQNLPNTCKTKFTNPNHLHEFTIVISPDEGYWRGGKFLF 139
K S+K+ + K++ E+ NLP TC+ +F++ + L F +VI PDEG+++GGKF+F
Sbjct: 21 KGSSKKASAAQLRIQKDINEL--NLPKTCEIEFSDHDDLLNFKLVICPDEGFYKGGKFVF 78
Query: 140 SVSVPEEYNMAPPKVKCLTKLWHPNINENGDICLSLLRQNSIDGLGWAPTRKLKDVIWGL 199
S V + Y PPKVKC T ++HPNI+ G++CL++LR++ W P + +I+GL
Sbjct: 79 SFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILRED------WKPVLTINSIIYGL 132
Query: 200 NSLFTDLLNFDDPLNIEAAEMYQKNKELFRERAR 233
LF + N +DPLN EAAE+ Q N+ LF + +
Sbjct: 133 QYLFLE-PNPEDPLNKEAAEVLQNNRRLFEQNVQ 165
>sp|Q9VSF3|UBC12_DROME NEDD8-conjugating enzyme Ubc12 OS=Drosophila melanogaster GN=CG7375
PE=2 SV=1
Length = 181
Score = 124 bits (310), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 59/139 (42%), Positives = 91/139 (65%), Gaps = 9/139 (6%)
Query: 95 KEVQEMEQNLPNTCKTKFTNPNHLHEFTIVISPDEGYWRGGKFLFSVSVPEEYNMAPPKV 154
K++ E+ NLPNTC T F +PN L F ++ISPDEG++R G+F+F+ V Y PPKV
Sbjct: 33 KDINEL--NLPNTCATDFPDPNDLLNFKLIISPDEGFYRDGRFVFNFRVGSNYPHEPPKV 90
Query: 155 KCLTKLWHPNINENGDICLSLLRQNSIDGLGWAPTRKLKDVIWGLNSLFTDLLNFDDPLN 214
KC T+++HPNI+ +G++CL++LR++ W P + +++GL LF + N +DPLN
Sbjct: 91 KCATQVYHPNIDLDGNVCLNILRED------WNPVLNINSIVYGLQFLFLE-PNPEDPLN 143
Query: 215 IEAAEMYQKNKELFRERAR 233
EAA++ Q N+ F +
Sbjct: 144 KEAADVLQTNRRQFENNVK 162
>sp|Q9ZU75|UB12L_ARATH Probable NEDD8-conjugating enzyme Ubc12-like OS=Arabidopsis
thaliana GN=RCE2 PE=2 SV=1
Length = 185
Score = 112 bits (280), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/142 (42%), Positives = 85/142 (59%), Gaps = 10/142 (7%)
Query: 93 LIKEVQEMEQNLPNTCKTKFTN-PNHLHEFTIVISPDEGYWRGGKFLFSVSVPEEYNMAP 151
L K++ E+ NLP +CK F N N L F + I PDEGY+ G F+FS V Y
Sbjct: 36 LHKDISEL--NLPKSCKISFPNGKNDLMNFEVTIKPDEGYYLSGNFVFSFQVSNMYPHEA 93
Query: 152 PKVKCLTKLWHPNINENGDICLSLLRQNSIDGLGWAPTRKLKDVIWGLNSLFTDLLNFDD 211
PKVKC TK++HPNI+ G++CL++LR++ W P + VI+GL LFT+ N++D
Sbjct: 94 PKVKCKTKVYHPNIDLEGNVCLNILRED------WKPVLNINTVIYGLFHLFTE-PNYED 146
Query: 212 PLNIEAAEMYQKNKELFRERAR 233
PLN EAA + + N + F R
Sbjct: 147 PLNHEAAAVLRDNPKTFEYNVR 168
>sp|O74549|UBC12_SCHPO NEDD8-conjugating enzyme ubc12 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=ubc12 PE=3 SV=1
Length = 177
Score = 108 bits (270), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 85/144 (59%), Gaps = 9/144 (6%)
Query: 95 KEVQEMEQNLPNTCKTKFTNPNHLHEFTIVISPDEGYWRGGKFLFSVSVPEEYNMAPPKV 154
K+V ++E +P+T T + +P L+ + I PDEGY++GGKF F + + + Y PPKV
Sbjct: 30 KDVTDLE--IPSTMSTSWPDPIKLNVLHLEIRPDEGYYKGGKFKFRIQIDDNYPHDPPKV 87
Query: 155 KCLTKLWHPNINENGDICLSLLRQNSIDGLGWAPTRKLKDVIWGLNSLFTDLLNFDDPLN 214
KCL K++HPNI+ G++CL++LRQ+ W P L ++ GL LF N +DPLN
Sbjct: 88 KCLNKIYHPNIDIEGNVCLNILRQD------WNPVLNLNSILVGLQFLFLS-PNAEDPLN 140
Query: 215 IEAAEMYQKNKELFRERARCLEFG 238
EAA K+ + F R R G
Sbjct: 141 KEAAADLHKDPQGFASRVRTAMKG 164
>sp|Q6C9W0|UBC12_YARLI NEDD8-conjugating enzyme UBC12 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=UBC12 PE=3 SV=1
Length = 179
Score = 105 bits (263), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 89/153 (58%), Gaps = 9/153 (5%)
Query: 81 SSNKRIFIRDKLLIKEVQEMEQNLPNTCKTKFTNPNHLHEFTIVISPDEGYWRGGKFLFS 140
S+ K++ + K++ E+ +LP+T KT F + + F + + PDEG+++GG+F FS
Sbjct: 17 SAKKKVTAAQLRVQKDLSEL--SLPSTMKTHFPSAEDIMNFELTVRPDEGFYQGGEFRFS 74
Query: 141 VSVPEEYNMAPPKVKCLTKLWHPNINENGDICLSLLRQNSIDGLGWAPTRKLKDVIWGLN 200
V + PPKVKCL K++HPNI+ G++CL++LR++ W P L V+ GL
Sbjct: 75 FYVNPNFPHEPPKVKCLQKVYHPNIDLEGNVCLNILRED------WKPVLSLNAVMIGLQ 128
Query: 201 SLFTDLLNFDDPLNIEAAEMYQKNKELFRERAR 233
LF + N DPLN +AA N+E F+ +
Sbjct: 129 YLFLE-PNASDPLNKDAAHQMTANREEFKRNVK 160
>sp|Q9SDY5|RCE1_ARATH NEDD8-conjugating enzyme Ubc12 OS=Arabidopsis thaliana GN=RCE1 PE=1
SV=1
Length = 184
Score = 105 bits (263), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 98/176 (55%), Gaps = 12/176 (6%)
Query: 61 MITLSKKLKMQNEGCDIVDK--SSNKRIFIRDKLLIKEVQEMEQNLPNTCKTKFTN-PNH 117
MI L K + Q E + +S K+ + L K++ E+ NLP++C F N +
Sbjct: 1 MIGLFKVKEKQREQAQNATRGGASVKKQSAGELRLHKDISEL--NLPSSCSISFPNGKDD 58
Query: 118 LHEFTIVISPDEGYWRGGKFLFSVSVPEEYNMAPPKVKCLTKLWHPNINENGDICLSLLR 177
L F + I PD+GY+ G F+F+ V Y PKVKC TK++HPNI+ G++CL++LR
Sbjct: 59 LMNFEVSIKPDDGYYHNGTFVFTFQVSPVYPHEAPKVKCKTKVYHPNIDLEGNVCLNILR 118
Query: 178 QNSIDGLGWAPTRKLKDVIWGLNSLFTDLLNFDDPLNIEAAEMYQKNKELFRERAR 233
++ W P + VI+GL LFT+ N +DPLN +AA + + N +LF R
Sbjct: 119 ED------WKPVLNINTVIYGLFHLFTE-PNSEDPLNHDAAAVLRDNPKLFETNVR 167
>sp|Q54TI6|UBC12_DICDI NEDD8-conjugating enzyme Ubc12 OS=Dictyostelium discoideum GN=ube2m
PE=3 SV=1
Length = 230
Score = 103 bits (258), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 81/139 (58%), Gaps = 9/139 (6%)
Query: 95 KEVQEMEQNLPNTCKTKFTNPNHLHEFTIVISPDEGYWRGGKFLFSVSVPEEYNMAPPKV 154
K++ EME +P C F + N + F + I+P +G ++ F F++++P Y PPKV
Sbjct: 84 KDIDEME--VPTGCAVSFKDTNDILNFNLSITPTDGLYQSATFQFTINIPSTYPYDPPKV 141
Query: 155 KCLTKLWHPNINENGDICLSLLRQNSIDGLGWAPTRKLKDVIWGLNSLFTDLLNFDDPLN 214
C T ++HPNI+ G +CL++LRQ+ W P + VI+GL +LF + N DDPLN
Sbjct: 142 HCDTLVYHPNIDLEGHVCLNILRQD------WMPVLNIGTVIFGLMTLFLE-PNPDDPLN 194
Query: 215 IEAAEMYQKNKELFRERAR 233
+AA++ NK+ F R
Sbjct: 195 KDAAQLMIDNKKTFEANVR 213
>sp|Q6FVQ8|UBC12_CANGA NEDD8-conjugating enzyme UBC12 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=UBC12 PE=3 SV=1
Length = 187
Score = 102 bits (254), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/143 (40%), Positives = 90/143 (62%), Gaps = 11/143 (7%)
Query: 93 LIKEVQEMEQNLPNTCKTKFTNPNHLHEFT--IVISPDEGYWRGGKFLFSVSVPEEYNMA 150
L K+++E+E LP T + + ++ E + I+I PDEG+++GGKF F+ + E Y +
Sbjct: 37 LQKDIEELE--LPPTVRVNIISLDNHKEMSLNIIIIPDEGFYKGGKFRFTATFLETYPID 94
Query: 151 PPKVKCLTKLWHPNINENGDICLSLLRQNSIDGLGWAPTRKLKDVIWGLNSLFTDLLNFD 210
PPKV C K++HPNI+ +G ICL++LR++ W+P L+ ++ GL SLF + N +
Sbjct: 95 PPKVICNNKIFHPNIDPHGKICLNILRED------WSPALDLQCIVLGLLSLFQE-PNGN 147
Query: 211 DPLNIEAAEMYQKNKELFRERAR 233
DPLN EAAE+ K+K F R
Sbjct: 148 DPLNKEAAEVLNKDKLEFGNLVR 170
>sp|P35134|UBC11_ARATH Ubiquitin-conjugating enzyme E2 11 OS=Arabidopsis thaliana GN=UBC11
PE=2 SV=2
Length = 148
Score = 100 bits (248), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 80/146 (54%), Gaps = 7/146 (4%)
Query: 88 IRDKLLIKEVQEMEQNLPNTCKTKFTNPNHLHEFTIVISPDEGYWRGGKFLFSVSVPEEY 147
+ K ++KE+++++++ P+ C + H ++ P E + GG FL S+ P +Y
Sbjct: 1 MASKRILKELKDLQKDPPSNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDY 60
Query: 148 NMAPPKVKCLTKLWHPNINENGDICLSLLRQNSIDGLGWAPTRKLKDVIWGLNSLFTDLL 207
PPKV TK++HPNIN NG ICL +L++ W+P + V+ + SL TD
Sbjct: 61 PFKPPKVSFKTKVYHPNINSNGSICLDILKEQ------WSPALTISKVLLSICSLLTD-P 113
Query: 208 NFDDPLNIEAAEMYQKNKELFRERAR 233
N DDPL E A MY+ ++ + AR
Sbjct: 114 NPDDPLVPEIAHMYKTDRSKYESTAR 139
>sp|P35133|UBC10_ARATH Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana GN=UBC10
PE=1 SV=1
Length = 148
Score = 100 bits (248), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 80/146 (54%), Gaps = 7/146 (4%)
Query: 88 IRDKLLIKEVQEMEQNLPNTCKTKFTNPNHLHEFTIVISPDEGYWRGGKFLFSVSVPEEY 147
+ K ++KE+++++++ P +C + H ++ P E + GG FL ++ P +Y
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDY 60
Query: 148 NMAPPKVKCLTKLWHPNINENGDICLSLLRQNSIDGLGWAPTRKLKDVIWGLNSLFTDLL 207
PPKV TK++HPNIN NG ICL +L++ W+P + V+ + SL TD
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQ------WSPALTISKVLLSICSLLTD-P 113
Query: 208 NFDDPLNIEAAEMYQKNKELFRERAR 233
N DDPL E A MY+ +K + AR
Sbjct: 114 NPDDPLVPEIAHMYKTDKNKYESTAR 139
>sp|P35132|UBC9_ARATH SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana GN=UBC9 PE=1
SV=1
Length = 148
Score = 99.0 bits (245), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 80/146 (54%), Gaps = 7/146 (4%)
Query: 88 IRDKLLIKEVQEMEQNLPNTCKTKFTNPNHLHEFTIVISPDEGYWRGGKFLFSVSVPEEY 147
+ K ++KE+++++++ P +C + H ++ P + + GG FL ++ P +Y
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60
Query: 148 NMAPPKVKCLTKLWHPNINENGDICLSLLRQNSIDGLGWAPTRKLKDVIWGLNSLFTDLL 207
PPKV TK++HPNIN NG ICL +L++ W+P + V+ + SL TD
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQ------WSPALTISKVLLSICSLLTD-P 113
Query: 208 NFDDPLNIEAAEMYQKNKELFRERAR 233
N DDPL E A MY+ +K + AR
Sbjct: 114 NPDDPLVPEIAHMYKTDKNKYESTAR 139
>sp|P35131|UBC8_ARATH Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis thaliana GN=UBC8
PE=1 SV=1
Length = 148
Score = 99.0 bits (245), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 80/146 (54%), Gaps = 7/146 (4%)
Query: 88 IRDKLLIKEVQEMEQNLPNTCKTKFTNPNHLHEFTIVISPDEGYWRGGKFLFSVSVPEEY 147
+ K ++KE+++++++ P +C + H ++ P E + GG FL ++ P +Y
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDY 60
Query: 148 NMAPPKVKCLTKLWHPNINENGDICLSLLRQNSIDGLGWAPTRKLKDVIWGLNSLFTDLL 207
PPKV TK++HPNIN NG ICL +L++ W+P + V+ + SL TD
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQ------WSPALTISKVLLSICSLLTD-P 113
Query: 208 NFDDPLNIEAAEMYQKNKELFRERAR 233
N DDPL E A MY+ ++ + AR
Sbjct: 114 NPDDPLVPEIAHMYKTDRAKYEATAR 139
>sp|P35135|UBC4_SOLLC Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum PE=2
SV=1
Length = 148
Score = 98.6 bits (244), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 80/146 (54%), Gaps = 7/146 (4%)
Query: 88 IRDKLLIKEVQEMEQNLPNTCKTKFTNPNHLHEFTIVISPDEGYWRGGKFLFSVSVPEEY 147
+ K ++KE+++++++ P +C + H ++ P + + GG FL S+ P +Y
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPTDSPYAGGVFLVSIHFPPDY 60
Query: 148 NMAPPKVKCLTKLWHPNINENGDICLSLLRQNSIDGLGWAPTRKLKDVIWGLNSLFTDLL 207
PPKV TK++HPNIN NG ICL +L++ W+P + V+ + SL TD
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQ------WSPALTISKVLLSICSLLTD-P 113
Query: 208 NFDDPLNIEAAEMYQKNKELFRERAR 233
N DDPL E A MY+ ++ + AR
Sbjct: 114 NPDDPLVPEIAHMYKTDRAKYETTAR 139
>sp|Q8S919|UBC5B_ORYSJ Ubiquitin-conjugating enzyme E2 5B OS=Oryza sativa subsp. japonica
GN=UBC5B PE=2 SV=1
Length = 148
Score = 97.8 bits (242), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 80/146 (54%), Gaps = 7/146 (4%)
Query: 88 IRDKLLIKEVQEMEQNLPNTCKTKFTNPNHLHEFTIVISPDEGYWRGGKFLFSVSVPEEY 147
+ K ++KE+++++++ P +C + H ++ P + + GG FL ++ P +Y
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATLMGPSDSPYAGGVFLVTIHFPPDY 60
Query: 148 NMAPPKVKCLTKLWHPNINENGDICLSLLRQNSIDGLGWAPTRKLKDVIWGLNSLFTDLL 207
PPKV TK++HPNIN NG ICL +L++ W+P + V+ + SL TD
Sbjct: 61 PFKPPKVALKTKVFHPNINSNGSICLDILKEQ------WSPALTISKVLLSICSLLTD-P 113
Query: 208 NFDDPLNIEAAEMYQKNKELFRERAR 233
N DDPL E A MY+ ++ + AR
Sbjct: 114 NPDDPLVPEIAHMYKTDRAKYESTAR 139
>sp|Q94F47|UBC28_ARATH Ubiquitin-conjugating enzyme E2 28 OS=Arabidopsis thaliana GN=UBC28
PE=2 SV=1
Length = 148
Score = 97.8 bits (242), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 80/146 (54%), Gaps = 7/146 (4%)
Query: 88 IRDKLLIKEVQEMEQNLPNTCKTKFTNPNHLHEFTIVISPDEGYWRGGKFLFSVSVPEEY 147
+ K ++KE+++++++ P +C + H ++ P + + GG FL ++ P +Y
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60
Query: 148 NMAPPKVKCLTKLWHPNINENGDICLSLLRQNSIDGLGWAPTRKLKDVIWGLNSLFTDLL 207
PPKV TK++HPN+N NG ICL +L++ W+P + V+ + SL TD
Sbjct: 61 PFKPPKVAFRTKVFHPNVNSNGSICLDILKEQ------WSPALTISKVLLSICSLLTD-P 113
Query: 208 NFDDPLNIEAAEMYQKNKELFRERAR 233
N DDPL E A MY+ ++ + AR
Sbjct: 114 NPDDPLVPEIAHMYKTDRAKYESTAR 139
>sp|Q9SLE4|UBC29_ARATH Ubiquitin-conjugating enzyme E2 29 OS=Arabidopsis thaliana GN=UBC29
PE=2 SV=1
Length = 148
Score = 97.4 bits (241), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 80/141 (56%), Gaps = 7/141 (4%)
Query: 93 LIKEVQEMEQNLPNTCKTKFTNPNHLHEFTIVISPDEGYWRGGKFLFSVSVPEEYNMAPP 152
++KE++E++++ P +C T + H ++ P+E + GG FL ++ P +Y PP
Sbjct: 6 ILKELKELQRDPPVSCSAGPTGEDMFHWQATIMGPNESPYSGGVFLVNIHFPPDYPFKPP 65
Query: 153 KVKCLTKLWHPNINENGDICLSLLRQNSIDGLGWAPTRKLKDVIWGLNSLFTDLLNFDDP 212
KV TK++HPNIN NG+ICL +L+ W+P + V+ + SL TD N DDP
Sbjct: 66 KVVFRTKVFHPNINSNGNICLDILKDQ------WSPALTISKVLLSICSLLTD-PNPDDP 118
Query: 213 LNIEAAEMYQKNKELFRERAR 233
L E A +Y+ +K + AR
Sbjct: 119 LVPEIAHIYKTDKTKYEAMAR 139
>sp|P70711|U2D2B_RAT Ubiquitin-conjugating enzyme E2 D2B OS=Rattus norvegicus GN=Ube2d2b
PE=1 SV=1
Length = 147
Score = 96.7 bits (239), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 78/143 (54%), Gaps = 7/143 (4%)
Query: 91 KLLIKEVQEMEQNLPNTCKTKFTNPNHLHEFTIVISPDEGYWRGGKFLFSVSVPEEYNMA 150
K + KE+ ++ Q+ P C + H ++ P++ ++GG F ++ P EY
Sbjct: 4 KRIHKELNDLAQDPPAQCSAGPVGEDMFHWQATIMGPNDSPYQGGAFFLTIDFPTEYPFK 63
Query: 151 PPKVKCLTKLWHPNINENGDICLSLLRQNSIDGLGWAPTRKLKDVIWGLNSLFTDLLNFD 210
PPKV+ T+++HPN+N NG ICL +LR W+P + V+ ++SL D N D
Sbjct: 64 PPKVEFTTRIYHPNVNSNGSICLDILRSQ------WSPALTISKVLLSISSLLCD-PNPD 116
Query: 211 DPLNIEAAEMYQKNKELFRERAR 233
DPL E A++Y+ +++ + AR
Sbjct: 117 DPLVPEIAQIYKTDRDKYNRTAR 139
>sp|Q6ZWY6|U2D2B_MOUSE Ubiquitin-conjugating enzyme E2 D2B OS=Mus musculus GN=Ube2d2b PE=2
SV=1
Length = 147
Score = 96.7 bits (239), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 78/143 (54%), Gaps = 7/143 (4%)
Query: 91 KLLIKEVQEMEQNLPNTCKTKFTNPNHLHEFTIVISPDEGYWRGGKFLFSVSVPEEYNMA 150
K + KE+ ++ Q+ P C + H ++ P++ ++GG F ++ P EY
Sbjct: 4 KRIHKELNDLAQDPPAQCSAGPVGEDMFHWQATIMGPNDSPYQGGAFFLTIDFPTEYPFK 63
Query: 151 PPKVKCLTKLWHPNINENGDICLSLLRQNSIDGLGWAPTRKLKDVIWGLNSLFTDLLNFD 210
PPKV+ T+++HPN+N NG ICL +LR W+P + V+ ++SL D N D
Sbjct: 64 PPKVEFTTRIYHPNVNSNGSICLDILRSQ------WSPALTISKVLLSISSLLCD-PNPD 116
Query: 211 DPLNIEAAEMYQKNKELFRERAR 233
DPL E A++Y+ +++ + AR
Sbjct: 117 DPLVPEIAQIYKTDRDKYNRTAR 139
>sp|P15731|UBC4_YEAST Ubiquitin-conjugating enzyme E2 4 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=UBC4 PE=1 SV=1
Length = 148
Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 80/153 (52%), Gaps = 14/153 (9%)
Query: 81 SSNKRIFIRDKLLIKEVQEMEQNLPNTCKTKFTNPNHLHEFTIVISPDEGYWRGGKFLFS 140
SS+KRI KE+ ++E++ P +C + H ++ P + + GG F S
Sbjct: 2 SSSKRI-------AKELSDLERDPPTSCSAGPVGDDLYHWQASIMGPADSPYAGGVFFLS 54
Query: 141 VSVPEEYNMAPPKVKCLTKLWHPNINENGDICLSLLRQNSIDGLGWAPTRKLKDVIWGLN 200
+ P +Y PPK+ TK++HPNIN NG+ICL +L+ W+P L V+ +
Sbjct: 55 IHFPTDYPFKPPKISFTTKIYHPNINANGNICLDILKDQ------WSPALTLSKVLLSIC 108
Query: 201 SLFTDLLNFDDPLNIEAAEMYQKNKELFRERAR 233
SL TD N DDPL E A +Y+ ++ + AR
Sbjct: 109 SLLTD-ANPDDPLVPEIAHIYKTDRPKYEATAR 140
>sp|Q8S920|UBC5A_ORYSJ Ubiquitin-conjugating enzyme E2 5A OS=Oryza sativa subsp. japonica
GN=UBC5A PE=2 SV=1
Length = 147
Score = 95.5 bits (236), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 78/146 (53%), Gaps = 7/146 (4%)
Query: 88 IRDKLLIKEVQEMEQNLPNTCKTKFTNPNHLHEFTIVISPDEGYWRGGKFLFSVSVPEEY 147
+ K + KE+++++++ P +C + H ++ P + + GG FL ++ P +Y
Sbjct: 1 MASKRIQKELKDLQKDPPTSCSAGPVGEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDY 60
Query: 148 NMAPPKVKCLTKLWHPNINENGDICLSLLRQNSIDGLGWAPTRKLKDVIWGLNSLFTDLL 207
PPKV TK++HPNIN NG ICL +L+ W+P + V+ + SL TD
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDILKDQ------WSPALTISKVLLSICSLLTD-P 113
Query: 208 NFDDPLNIEAAEMYQKNKELFRERAR 233
N DDPL E A MY+ ++ + AR
Sbjct: 114 NPDDPLVPEIAHMYKTDRHKYENTAR 139
>sp|P35129|UBC2_CAEEL Ubiquitin-conjugating enzyme E2 2 OS=Caenorhabditis elegans
GN=let-70 PE=1 SV=1
Length = 147
Score = 95.1 bits (235), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 76/143 (53%), Gaps = 7/143 (4%)
Query: 91 KLLIKEVQEMEQNLPNTCKTKFTNPNHLHEFTIVISPDEGYWRGGKFLFSVSVPEEYNMA 150
K + KE+Q++ ++ P C + H ++ P E ++GG F ++ P +Y
Sbjct: 4 KRIQKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFK 63
Query: 151 PPKVKCLTKLWHPNINENGDICLSLLRQNSIDGLGWAPTRKLKDVIWGLNSLFTDLLNFD 210
PPKV T+++HPNIN NG ICL +LR W+P + V+ + SL D N D
Sbjct: 64 PPKVAFTTRIYHPNINSNGSICLDILRSQ------WSPALTISKVLLSICSLLCD-PNPD 116
Query: 211 DPLNIEAAEMYQKNKELFRERAR 233
DPL E A +Y+ ++E + + AR
Sbjct: 117 DPLVPEIARIYKTDRERYNQLAR 139
>sp|D3ZDK2|UB2D1_RAT Ubiquitin-conjugating enzyme E2 D1 OS=Rattus norvegicus GN=Ube2d1
PE=1 SV=1
Length = 147
Score = 94.4 bits (233), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 76/143 (53%), Gaps = 7/143 (4%)
Query: 91 KLLIKEVQEMEQNLPNTCKTKFTNPNHLHEFTIVISPDEGYWRGGKFLFSVSVPEEYNMA 150
K + KE+ +++++ P C + H ++ P + ++GG F +V P +Y
Sbjct: 4 KRIQKELSDLQRDPPAHCSAGPVGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFK 63
Query: 151 PPKVKCLTKLWHPNINENGDICLSLLRQNSIDGLGWAPTRKLKDVIWGLNSLFTDLLNFD 210
PPK+ TK++HPNIN NG ICL +LR W+P + V+ + SL D N D
Sbjct: 64 PPKIAFTTKIYHPNINSNGSICLDILRSQ------WSPALTVSKVLLSICSLLCD-PNPD 116
Query: 211 DPLNIEAAEMYQKNKELFRERAR 233
DPL + A++Y+ +KE + AR
Sbjct: 117 DPLVPDIAQIYKSDKEKYNRHAR 139
>sp|P61080|UB2D1_MOUSE Ubiquitin-conjugating enzyme E2 D1 OS=Mus musculus GN=Ube2d1 PE=2
SV=1
Length = 147
Score = 94.4 bits (233), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 76/143 (53%), Gaps = 7/143 (4%)
Query: 91 KLLIKEVQEMEQNLPNTCKTKFTNPNHLHEFTIVISPDEGYWRGGKFLFSVSVPEEYNMA 150
K + KE+ +++++ P C + H ++ P + ++GG F +V P +Y
Sbjct: 4 KRIQKELSDLQRDPPAHCSAGPVGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFK 63
Query: 151 PPKVKCLTKLWHPNINENGDICLSLLRQNSIDGLGWAPTRKLKDVIWGLNSLFTDLLNFD 210
PPK+ TK++HPNIN NG ICL +LR W+P + V+ + SL D N D
Sbjct: 64 PPKIAFTTKIYHPNINSNGSICLDILRSQ------WSPALTVSKVLLSICSLLCD-PNPD 116
Query: 211 DPLNIEAAEMYQKNKELFRERAR 233
DPL + A++Y+ +KE + AR
Sbjct: 117 DPLVPDIAQIYKSDKEKYNRHAR 139
>sp|P51668|UB2D1_HUMAN Ubiquitin-conjugating enzyme E2 D1 OS=Homo sapiens GN=UBE2D1 PE=1
SV=1
Length = 147
Score = 94.4 bits (233), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 76/143 (53%), Gaps = 7/143 (4%)
Query: 91 KLLIKEVQEMEQNLPNTCKTKFTNPNHLHEFTIVISPDEGYWRGGKFLFSVSVPEEYNMA 150
K + KE+ +++++ P C + H ++ P + ++GG F +V P +Y
Sbjct: 4 KRIQKELSDLQRDPPAHCSAGPVGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFK 63
Query: 151 PPKVKCLTKLWHPNINENGDICLSLLRQNSIDGLGWAPTRKLKDVIWGLNSLFTDLLNFD 210
PPK+ TK++HPNIN NG ICL +LR W+P + V+ + SL D N D
Sbjct: 64 PPKIAFTTKIYHPNINSNGSICLDILRSQ------WSPALTVSKVLLSICSLLCD-PNPD 116
Query: 211 DPLNIEAAEMYQKNKELFRERAR 233
DPL + A++Y+ +KE + AR
Sbjct: 117 DPLVPDIAQIYKSDKEKYNRHAR 139
>sp|Q2TA10|UB2D1_BOVIN Ubiquitin-conjugating enzyme E2 D1 OS=Bos taurus GN=UBE2D1 PE=2
SV=1
Length = 147
Score = 94.4 bits (233), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 76/143 (53%), Gaps = 7/143 (4%)
Query: 91 KLLIKEVQEMEQNLPNTCKTKFTNPNHLHEFTIVISPDEGYWRGGKFLFSVSVPEEYNMA 150
K + KE+ +++++ P C + H ++ P + ++GG F +V P +Y
Sbjct: 4 KRIQKELSDLQRDPPAHCSAGPVGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFK 63
Query: 151 PPKVKCLTKLWHPNINENGDICLSLLRQNSIDGLGWAPTRKLKDVIWGLNSLFTDLLNFD 210
PPK+ TK++HPNIN NG ICL +LR W+P + V+ + SL D N D
Sbjct: 64 PPKIAFTTKIYHPNINSNGSICLDILRSQ------WSPALTVSKVLLSICSLLCD-PNPD 116
Query: 211 DPLNIEAAEMYQKNKELFRERAR 233
DPL + A++Y+ +KE + AR
Sbjct: 117 DPLVPDIAQIYKSDKEKYNRHAR 139
>sp|P25867|UBCD1_DROME Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophila melanogaster
GN=eff PE=2 SV=1
Length = 147
Score = 94.0 bits (232), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 76/143 (53%), Gaps = 7/143 (4%)
Query: 91 KLLIKEVQEMEQNLPNTCKTKFTNPNHLHEFTIVISPDEGYWRGGKFLFSVSVPEEYNMA 150
K + KE+Q++ ++ P C + H ++ P + ++GG F ++ P +Y
Sbjct: 4 KRINKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPDSPYQGGVFFLTIHFPTDYPFK 63
Query: 151 PPKVKCLTKLWHPNINENGDICLSLLRQNSIDGLGWAPTRKLKDVIWGLNSLFTDLLNFD 210
PPKV T+++HPNIN NG ICL +LR W+P + V+ + SL D N D
Sbjct: 64 PPKVAFTTRIYHPNINSNGSICLDILRSQ------WSPALTISKVLLSICSLLCD-PNPD 116
Query: 211 DPLNIEAAEMYQKNKELFRERAR 233
DPL E A +Y+ ++E + E AR
Sbjct: 117 DPLVPEIARIYKTDREKYNELAR 139
>sp|P15732|UBC5_YEAST Ubiquitin-conjugating enzyme E2-16 kDa OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=UBC5 PE=1 SV=1
Length = 148
Score = 93.6 bits (231), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 80/153 (52%), Gaps = 14/153 (9%)
Query: 81 SSNKRIFIRDKLLIKEVQEMEQNLPNTCKTKFTNPNHLHEFTIVISPDEGYWRGGKFLFS 140
SS+KRI KE+ ++ ++ P +C + H ++ P + + GG F S
Sbjct: 2 SSSKRI-------AKELSDLGRDPPASCSAGPVGDDLYHWQASIMGPSDSPYAGGVFFLS 54
Query: 141 VSVPEEYNMAPPKVKCLTKLWHPNINENGDICLSLLRQNSIDGLGWAPTRKLKDVIWGLN 200
+ P +Y PPKV TK++HPNIN +G+ICL +L+ W+P L V+ +
Sbjct: 55 IHFPTDYPFKPPKVNFTTKIYHPNINSSGNICLDILKDQ------WSPALTLSKVLLSIC 108
Query: 201 SLFTDLLNFDDPLNIEAAEMYQKNKELFRERAR 233
SL TD N DDPL E A++Y+ +K + A+
Sbjct: 109 SLLTD-ANPDDPLVPEIAQIYKTDKAKYEATAK 140
>sp|P43102|UBC4_CANAX Ubiquitin-conjugating enzyme E2 4 OS=Candida albicans GN=UBC4 PE=2
SV=1
Length = 147
Score = 92.8 bits (229), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 79/143 (55%), Gaps = 7/143 (4%)
Query: 91 KLLIKEVQEMEQNLPNTCKTKFTNPNHLHEFTIVISPDEGYWRGGKFLFSVSVPEEYNMA 150
K + KE+ ++ ++ P++C + H ++ P + + GG F S+ P +Y +
Sbjct: 4 KRINKELSDLGRDPPSSCSAGPVGDDLYHWQASIMGPPDSPYAGGVFFLSIHFPTDYPLK 63
Query: 151 PPKVKCLTKLWHPNINENGDICLSLLRQNSIDGLGWAPTRKLKDVIWGLNSLFTDLLNFD 210
PPK+ TK++HPNIN NG+ICL +L+ W+P + V+ + SL TD N D
Sbjct: 64 PPKIALTTKIYHPNINSNGNICLDILKDQ------WSPALTISKVLLSICSLLTD-ANPD 116
Query: 211 DPLNIEAAEMYQKNKELFRERAR 233
DPL E A +Y+++++ + A+
Sbjct: 117 DPLVPEIAHIYKQDRKKYEATAK 139
>sp|Q9Y2X8|UB2D4_HUMAN Ubiquitin-conjugating enzyme E2 D4 OS=Homo sapiens GN=UBE2D4 PE=1
SV=1
Length = 147
Score = 92.4 bits (228), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 75/143 (52%), Gaps = 7/143 (4%)
Query: 91 KLLIKEVQEMEQNLPNTCKTKFTNPNHLHEFTIVISPDEGYWRGGKFLFSVSVPEEYNMA 150
K + KE+ +++++ P C + H ++ P++ ++GG F ++ P +Y
Sbjct: 4 KRIQKELTDLQRDPPAQCSAGPVGDDLFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFK 63
Query: 151 PPKVKCLTKLWHPNINENGDICLSLLRQNSIDGLGWAPTRKLKDVIWGLNSLFTDLLNFD 210
PPKV TK++HPNIN NG ICL +LR W+P + V+ + SL D N D
Sbjct: 64 PPKVAFTTKIYHPNINSNGSICLDILRSQ------WSPALTVSKVLLSICSLLCD-PNPD 116
Query: 211 DPLNIEAAEMYQKNKELFRERAR 233
DPL E A Y+ ++E + AR
Sbjct: 117 DPLVPEIAHTYKADREKYNRLAR 139
>sp|A5PKP9|UB2D4_XENLA Ubiquitin-conjugating enzyme E2 D4 OS=Xenopus laevis GN=ube2d4 PE=1
SV=1
Length = 147
Score = 91.7 bits (226), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 75/143 (52%), Gaps = 7/143 (4%)
Query: 91 KLLIKEVQEMEQNLPNTCKTKFTNPNHLHEFTIVISPDEGYWRGGKFLFSVSVPEEYNMA 150
K + KE+ +++++ P C + H ++ P++ ++GG F ++ P +Y
Sbjct: 4 KRIQKELMDLQRDPPAQCSAGPVGEDLFHWQATIMGPNDSPFQGGVFFLTIHFPTDYPFK 63
Query: 151 PPKVKCLTKLWHPNINENGDICLSLLRQNSIDGLGWAPTRKLKDVIWGLNSLFTDLLNFD 210
PPKV TK++HPNIN NG ICL +LR W+P + V+ + SL D N D
Sbjct: 64 PPKVAFTTKIYHPNINSNGSICLDILRSQ------WSPALTVSKVLLSICSLLCD-PNPD 116
Query: 211 DPLNIEAAEMYQKNKELFRERAR 233
DPL E A Y+ ++E + AR
Sbjct: 117 DPLVPEIAHTYKADREKYNRLAR 139
>sp|P62840|UB2D2_XENLA Ubiquitin-conjugating enzyme E2 D2 OS=Xenopus laevis GN=ube2d2 PE=1
SV=1
Length = 147
Score = 91.7 bits (226), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 75/143 (52%), Gaps = 7/143 (4%)
Query: 91 KLLIKEVQEMEQNLPNTCKTKFTNPNHLHEFTIVISPDEGYWRGGKFLFSVSVPEEYNMA 150
K + KE+ ++ ++ P C + H ++ P++ ++GG F ++ P +Y
Sbjct: 4 KRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFK 63
Query: 151 PPKVKCLTKLWHPNINENGDICLSLLRQNSIDGLGWAPTRKLKDVIWGLNSLFTDLLNFD 210
PPKV T+++HPNIN NG ICL +LR W+P + V+ + SL D N D
Sbjct: 64 PPKVAFTTRIYHPNINSNGSICLDILRSQ------WSPALTISKVLLSICSLLCD-PNPD 116
Query: 211 DPLNIEAAEMYQKNKELFRERAR 233
DPL E A +Y+ ++E + AR
Sbjct: 117 DPLVPEIARIYKTDREKYNRIAR 139
>sp|P62839|UB2D2_RAT Ubiquitin-conjugating enzyme E2 D2 OS=Rattus norvegicus GN=Ube2d2
PE=1 SV=1
Length = 147
Score = 91.7 bits (226), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 75/143 (52%), Gaps = 7/143 (4%)
Query: 91 KLLIKEVQEMEQNLPNTCKTKFTNPNHLHEFTIVISPDEGYWRGGKFLFSVSVPEEYNMA 150
K + KE+ ++ ++ P C + H ++ P++ ++GG F ++ P +Y
Sbjct: 4 KRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFK 63
Query: 151 PPKVKCLTKLWHPNINENGDICLSLLRQNSIDGLGWAPTRKLKDVIWGLNSLFTDLLNFD 210
PPKV T+++HPNIN NG ICL +LR W+P + V+ + SL D N D
Sbjct: 64 PPKVAFTTRIYHPNINSNGSICLDILRSQ------WSPALTISKVLLSICSLLCD-PNPD 116
Query: 211 DPLNIEAAEMYQKNKELFRERAR 233
DPL E A +Y+ ++E + AR
Sbjct: 117 DPLVPEIARIYKTDREKYNRIAR 139
>sp|P62838|UB2D2_MOUSE Ubiquitin-conjugating enzyme E2 D2 OS=Mus musculus GN=Ube2d2 PE=1
SV=1
Length = 147
Score = 91.7 bits (226), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 75/143 (52%), Gaps = 7/143 (4%)
Query: 91 KLLIKEVQEMEQNLPNTCKTKFTNPNHLHEFTIVISPDEGYWRGGKFLFSVSVPEEYNMA 150
K + KE+ ++ ++ P C + H ++ P++ ++GG F ++ P +Y
Sbjct: 4 KRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFK 63
Query: 151 PPKVKCLTKLWHPNINENGDICLSLLRQNSIDGLGWAPTRKLKDVIWGLNSLFTDLLNFD 210
PPKV T+++HPNIN NG ICL +LR W+P + V+ + SL D N D
Sbjct: 64 PPKVAFTTRIYHPNINSNGSICLDILRSQ------WSPALTISKVLLSICSLLCD-PNPD 116
Query: 211 DPLNIEAAEMYQKNKELFRERAR 233
DPL E A +Y+ ++E + AR
Sbjct: 117 DPLVPEIARIYKTDREKYNRIAR 139
>sp|P62837|UB2D2_HUMAN Ubiquitin-conjugating enzyme E2 D2 OS=Homo sapiens GN=UBE2D2 PE=1
SV=1
Length = 147
Score = 91.7 bits (226), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 75/143 (52%), Gaps = 7/143 (4%)
Query: 91 KLLIKEVQEMEQNLPNTCKTKFTNPNHLHEFTIVISPDEGYWRGGKFLFSVSVPEEYNMA 150
K + KE+ ++ ++ P C + H ++ P++ ++GG F ++ P +Y
Sbjct: 4 KRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFK 63
Query: 151 PPKVKCLTKLWHPNINENGDICLSLLRQNSIDGLGWAPTRKLKDVIWGLNSLFTDLLNFD 210
PPKV T+++HPNIN NG ICL +LR W+P + V+ + SL D N D
Sbjct: 64 PPKVAFTTRIYHPNINSNGSICLDILRSQ------WSPALTISKVLLSICSLLCD-PNPD 116
Query: 211 DPLNIEAAEMYQKNKELFRERAR 233
DPL E A +Y+ ++E + AR
Sbjct: 117 DPLVPEIARIYKTDREKYNRIAR 139
>sp|Q1RMX2|UB2D2_BOVIN Ubiquitin-conjugating enzyme E2 D2 OS=Bos taurus GN=UBE2D2 PE=2
SV=1
Length = 147
Score = 91.7 bits (226), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 75/143 (52%), Gaps = 7/143 (4%)
Query: 91 KLLIKEVQEMEQNLPNTCKTKFTNPNHLHEFTIVISPDEGYWRGGKFLFSVSVPEEYNMA 150
K + KE+ ++ ++ P C + H ++ P++ ++GG F ++ P +Y
Sbjct: 4 KRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFK 63
Query: 151 PPKVKCLTKLWHPNINENGDICLSLLRQNSIDGLGWAPTRKLKDVIWGLNSLFTDLLNFD 210
PPKV T+++HPNIN NG ICL +LR W+P + V+ + SL D N D
Sbjct: 64 PPKVAFTTRIYHPNINSNGSICLDILRSQ------WSPALTISKVLLSICSLLCD-PNPD 116
Query: 211 DPLNIEAAEMYQKNKELFRERAR 233
DPL E A +Y+ ++E + AR
Sbjct: 117 DPLVPEIARIYKTDREKYNRIAR 139
>sp|P46595|UBC4_SCHPO Ubiquitin-conjugating enzyme E2 4 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ubc4 PE=2 SV=1
Length = 147
Score = 91.3 bits (225), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 75/143 (52%), Gaps = 7/143 (4%)
Query: 91 KLLIKEVQEMEQNLPNTCKTKFTNPNHLHEFTIVISPDEGYWRGGKFLFSVSVPEEYNMA 150
K + +E+ ++ ++ P++C + H ++ P + + GG F S+ P +Y
Sbjct: 4 KRINRELADLGKDPPSSCSAGPVGDDLFHWQATIMGPADSPYAGGVFFLSIHFPTDYPFK 63
Query: 151 PPKVKCLTKLWHPNINENGDICLSLLRQNSIDGLGWAPTRKLKDVIWGLNSLFTDLLNFD 210
PPKV T+++HPNIN NG ICL +LR W+P + V+ + SL TD N D
Sbjct: 64 PPKVNFTTRIYHPNINSNGSICLDILRDQ------WSPALTISKVLLSICSLLTD-PNPD 116
Query: 211 DPLNIEAAEMYQKNKELFRERAR 233
DPL E A +Y+ ++ + AR
Sbjct: 117 DPLVPEIAHVYKTDRSRYELSAR 139
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.138 0.434
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 98,281,291
Number of Sequences: 539616
Number of extensions: 4109238
Number of successful extensions: 8393
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 252
Number of HSP's successfully gapped in prelim test: 37
Number of HSP's that attempted gapping in prelim test: 8001
Number of HSP's gapped (non-prelim): 291
length of query: 242
length of database: 191,569,459
effective HSP length: 114
effective length of query: 128
effective length of database: 130,053,235
effective search space: 16646814080
effective search space used: 16646814080
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)