BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4612
(112 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q1HQF8|KTAP2_AEDAE Protein KRTCAP2 homolog OS=Aedes aegypti GN=AAEL007634 PE=2 SV=1
Length = 132
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 63/112 (56%), Positives = 81/112 (72%), Gaps = 2/112 (1%)
Query: 1 MQMYRQWLSSSQLNTILGGLLGSLFFVFSLTGLGNLESTIFGKNFQTKLFPEVILCMLGA 60
MQMY+ ++SSQ+ T+ GG LGS F+ SLT + NLE+ + GK FQ KLFPEV C++G+
Sbjct: 23 MQMYKPLIASSQMATVFGGFLGSWLFILSLTAVSNLEAVVLGKGFQAKLFPEVAFCLIGS 82
Query: 61 VMAAGMVHRVCATSCIMFSIIDLYYMNRISQKVHVQPIIQASQPTGGKKKKN 112
+ A GMVHRVCAT+CI+FS+ LYY+NRISQKVH P+ GKKKK
Sbjct: 83 LFACGMVHRVCATTCILFSVAALYYINRISQKVHNAPV--PVDTYAGKKKKK 132
>sp|Q5Q995|KTAP2_IXOSC Protein KRTCAP2 homolog OS=Ixodes scapularis PE=2 SV=1
Length = 135
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 52/94 (55%), Positives = 73/94 (77%)
Query: 1 MQMYRQWLSSSQLNTILGGLLGSLFFVFSLTGLGNLESTIFGKNFQTKLFPEVILCMLGA 60
MQ+Y+ L+SSQ I+GG LGS+ F+ LT + N E+ FG+NFQTKL PEV++ ++ A
Sbjct: 23 MQIYKSQLTSSQPMAIVGGFLGSVLFILILTAISNFETHFFGRNFQTKLIPEVVIALVIA 82
Query: 61 VMAAGMVHRVCATSCIMFSIIDLYYMNRISQKVH 94
+ A+GMVHRVC T+C++FSI+ LYY++RIS KVH
Sbjct: 83 MAASGMVHRVCITTCLIFSIVALYYVSRISIKVH 116
>sp|Q8N6L1|KTAP2_HUMAN Keratinocyte-associated protein 2 OS=Homo sapiens GN=KRTCAP2 PE=1
SV=1
Length = 162
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 58/114 (50%), Positives = 85/114 (74%), Gaps = 2/114 (1%)
Query: 1 MQMYRQWLSSSQLNTILGGLLGSLFFVFSLTGLGNLESTIFGKNFQTKLFPEVILCMLGA 60
MQMY + L+S++ TI GGLLGS FVFSLT NLE+ +FGK FQ K+FPE++LC+L A
Sbjct: 49 MQMYSRQLASTEWLTIQGGLLGSGLFVFSLTAFNNLENLVFGKGFQAKIFPEILLCLLLA 108
Query: 61 VMAAGMVHRVCATSCIMFSIIDLYYMNRISQKVH--VQPIIQASQPTGGKKKKN 112
+ A+G++HRVC T+C +FS++ LYY+N+IS ++ P++ ++ TG KK+N
Sbjct: 109 LFASGLIHRVCVTTCFIFSMVGLYYINKISSTLYQAAAPVLTPAKVTGKSKKRN 162
>sp|A6QQ59|KTAP2_BOVIN Keratinocyte-associated protein 2 OS=Bos taurus GN=KRTCAP2 PE=2
SV=1
Length = 136
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 58/114 (50%), Positives = 85/114 (74%), Gaps = 2/114 (1%)
Query: 1 MQMYRQWLSSSQLNTILGGLLGSLFFVFSLTGLGNLESTIFGKNFQTKLFPEVILCMLGA 60
MQMY + L+S++ TI GGLLGS FVFSLT NLE+ +FGK FQ K+FPE++LC+L A
Sbjct: 23 MQMYSRQLASTEWLTIQGGLLGSGLFVFSLTAFNNLENLVFGKGFQAKIFPEILLCLLLA 82
Query: 61 VMAAGMVHRVCATSCIMFSIIDLYYMNRISQKVH--VQPIIQASQPTGGKKKKN 112
+ A+G++HRVC T+C +FS++ LYY+N+IS ++ P++ ++ TG KK+N
Sbjct: 83 LFASGLIHRVCVTTCFIFSMVGLYYINKISSTLYQATAPVLTPAKVTGKGKKRN 136
>sp|P86229|KTAP2_CANFA Keratinocyte-associated protein 2 OS=Canis familiaris GN=KRTCAP2
PE=1 SV=1
Length = 136
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 58/114 (50%), Positives = 85/114 (74%), Gaps = 2/114 (1%)
Query: 1 MQMYRQWLSSSQLNTILGGLLGSLFFVFSLTGLGNLESTIFGKNFQTKLFPEVILCMLGA 60
MQMY + L+S++ TI GGLLGS FVFSLT NLE+ +FGK FQ K+FPE++LC+L A
Sbjct: 23 MQMYSRQLASTEWLTIQGGLLGSGLFVFSLTAFNNLENLVFGKGFQAKIFPEILLCLLLA 82
Query: 61 VMAAGMVHRVCATSCIMFSIIDLYYMNRISQKVH--VQPIIQASQPTGGKKKKN 112
+ A+G++HRVC T+C +FS++ LYY+N+IS ++ P++ ++ TG KK+N
Sbjct: 83 LFASGLIHRVCVTTCFIFSMVGLYYINKISSTLYQAATPVLTPAKVTGKGKKRN 136
>sp|Q5RL79|KTAP2_MOUSE Keratinocyte-associated protein 2 OS=Mus musculus GN=Krtcap2 PE=2
SV=2
Length = 136
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 85/114 (74%), Gaps = 2/114 (1%)
Query: 1 MQMYRQWLSSSQLNTILGGLLGSLFFVFSLTGLGNLESTIFGKNFQTKLFPEVILCMLGA 60
MQ+Y + L+S++ TI GGLLGS FVFSLT NLE+ +FGK FQ K+FPE++LC+L A
Sbjct: 23 MQIYSRQLASTEWLTIQGGLLGSGLFVFSLTAFNNLENLVFGKGFQAKIFPEILLCLLLA 82
Query: 61 VMAAGMVHRVCATSCIMFSIIDLYYMNRISQKVH--VQPIIQASQPTGGKKKKN 112
+ A+G++HRVC T+C +FS++ LYY+N+IS ++ P++ ++ TG KK+N
Sbjct: 83 LFASGLIHRVCVTTCFIFSMVGLYYINKISSTLYQATAPVLTPAKITGKGKKRN 136
>sp|B2RZC9|KTAP2_RAT Keratinocyte-associated protein 2 OS=Rattus norvegicus GN=Krtcap2
PE=2 SV=2
Length = 136
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 84/114 (73%), Gaps = 2/114 (1%)
Query: 1 MQMYRQWLSSSQLNTILGGLLGSLFFVFSLTGLGNLESTIFGKNFQTKLFPEVILCMLGA 60
MQ+Y + L+S++ TI GGLLGS FVFSLT NLE+ +FGK FQ K+FPE++LC+L A
Sbjct: 23 MQIYSRQLASTEWLTIQGGLLGSGLFVFSLTAFNNLENLVFGKGFQAKIFPEILLCLLLA 82
Query: 61 VMAAGMVHRVCATSCIMFSIIDLYYMNRISQKVH--VQPIIQASQPTGGKKKKN 112
+ A+G++HRVC T+C +FS++ LYY+N+IS ++ P + ++ TG KK+N
Sbjct: 83 LFASGLIHRVCVTTCFIFSMVGLYYINKISSTLYQATAPALTPAKVTGKSKKRN 136
>sp|Q8INQ7|KTAP2_DROME Protein KRTCAP2 homolog OS=Drosophila melanogaster GN=CG31460 PE=2
SV=1
Length = 141
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 74/114 (64%), Gaps = 3/114 (2%)
Query: 1 MQMYRQWLSSSQLNTILGGLLGSLFFVFSLTGLGNLESTIFGKNFQTKLFPEVILCMLGA 60
++ +W + SQL +LGG L S F+ SLT + N E +FG++FQ KL PE+I C+
Sbjct: 28 LRFCSEWFNDSQLRVLLGGYLFSWVFILSLTCVSNAEMVVFGQDFQAKLLPEIIFCLSLT 87
Query: 61 VMAAGMVHRVCATSCIMFSIIDLYYMNRISQKVHVQPIIQASQPT---GGKKKK 111
V AAG+VHRVCAT+ ++FS++ LY++NRIS K + + PT GGKK K
Sbjct: 88 VAAAGLVHRVCATTSVLFSLVGLYFLNRISTKYYSVQVPSVDAPTTRKGGKKFK 141
>sp|Q295N5|KTAP2_DROPS Protein KRTCAP2 homolog OS=Drosophila pseudoobscura pseudoobscura
GN=GA16263 PE=3 SV=3
Length = 140
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 70/111 (63%)
Query: 1 MQMYRQWLSSSQLNTILGGLLGSLFFVFSLTGLGNLESTIFGKNFQTKLFPEVILCMLGA 60
++ W + SQLN ++GG L S F+ SLT + N E IFG +FQ KL PE++ C+
Sbjct: 28 LRFCADWFNGSQLNVLVGGYLFSWLFILSLTCVSNAEMLIFGPDFQAKLVPEILFCLSLT 87
Query: 61 VMAAGMVHRVCATSCIMFSIIDLYYMNRISQKVHVQPIIQASQPTGGKKKK 111
V AAG+VHRVCAT+ ++FS++ LY++NRIS K + ++ P KK
Sbjct: 88 VAAAGIVHRVCATTSVLFSLVGLYFLNRISIKYYSTSVVPVDAPARKTAKK 138
>sp|Q54L98|KTAP2_DICDI Protein KRTCAP2 homolog OS=Dictyostelium discoideum GN=DDB_G0286759
PE=3 SV=1
Length = 127
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 56/102 (54%), Gaps = 9/102 (8%)
Query: 10 SSQLNTILGGLLGSLFFVFSLTGLGNLESTIFGKNFQTKLFPEVILCMLGAVMAAGMVHR 69
SS+ TILGG +GS F +T +G ++ + KL E +L ++ M + VHR
Sbjct: 35 SSEGATILGGFVGSFLFFLQMTFIGAIKRDV-------KLL-ETVLAVIITAMISSSVHR 86
Query: 70 VCATSCIMFSIIDLYYMNRISQKVHVQPIIQASQPTGGKKKK 111
V T+ I+FSI ++Y+N S K++ + + + GKK+K
Sbjct: 87 VSGTTSIIFSIGWIFYLNHASTKIY-SKLEETNTVVSGKKRK 127
>sp|Q5ZKZ9|LMF2_CHICK Lipase maturation factor 2 OS=Gallus gallus GN=LMF2 PE=2 SV=2
Length = 714
Score = 29.6 bits (65), Expect = 5.2, Method: Composition-based stats.
Identities = 10/34 (29%), Positives = 23/34 (67%)
Query: 54 ILCMLGAVMAAGMVHRVCATSCIMFSIIDLYYMN 87
+LC+LGAV + G + C++F+++ ++Y++
Sbjct: 81 LLCLLGAVASMGALLCAPLRDCLLFAVLRVFYLS 114
>sp|Q06479|YL352_YEAST F-box protein YLR352W OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=YLR352W PE=1 SV=1
Length = 807
Score = 29.6 bits (65), Expect = 6.3, Method: Composition-based stats.
Identities = 27/103 (26%), Positives = 44/103 (42%), Gaps = 10/103 (9%)
Query: 10 SSQLNTILGGLLGSLFFVFSLTGLGNLESTIFGKNFQTKLFPEVILCML--GAVMAAGMV 67
SS++N ++ L F + NL + +N Q L +I +L G V++ V
Sbjct: 117 SSEMNKMIKNLTNETLLEFLMLTKANLREFLACENIQDDLDDNIIKYILSPGKVLS---V 173
Query: 68 HRVCATSCIMFS-----IIDLYYMNRISQKVHVQPIIQASQPT 105
C S F+ +D YY N+ + ++PI Q Q T
Sbjct: 174 VDFCGCSGTTFTESFIKALDKYYPNKSIDQYRLEPIQQNYQIT 216
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.327 0.138 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,156,426
Number of Sequences: 539616
Number of extensions: 1220870
Number of successful extensions: 3189
Number of sequences better than 100.0: 15
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 3176
Number of HSP's gapped (non-prelim): 15
length of query: 112
length of database: 191,569,459
effective HSP length: 80
effective length of query: 32
effective length of database: 148,400,179
effective search space: 4748805728
effective search space used: 4748805728
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 55 (25.8 bits)