RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy4613
(96 letters)
>d3dara1 b.1.1.4 (A:153-249) Fibroblast growth factor receptor,
FGFR {Human (Homo sapiens), FGFR2a [TaxId: 9606]}
Length = 97
Score = 57.9 bits (139), Expect = 2e-13
Identities = 14/90 (15%), Positives = 30/90 (33%), Gaps = 5/90 (5%)
Query: 6 VPNQLVGAPIDTDVTLECYVEAYPKSINYWVRDQGDMVISSERYEVESISRSIFDFKMRL 65
+ +L P V C P W+++ + + + L
Sbjct: 10 MEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIG-----GYKVRNQHWSL 64
Query: 66 TIKKITKYDLGSYKCIAKNSLGEVESSIRL 95
++ + D G+Y C+ +N G + + L
Sbjct: 65 IMESVVPSDKGNYTCVVENEYGSINHTYHL 94
>d1biha4 b.1.1.4 (A:307-395) Hemolin {Moth (Hyalophora cecropia)
[TaxId: 7123]}
Length = 89
Score = 57.8 bits (139), Expect = 2e-13
Identities = 18/93 (19%), Positives = 27/93 (29%), Gaps = 11/93 (11%)
Query: 3 VIHVPNQLVGAPIDTDVTLECYVEAYPKSINYWVRDQGDMVISSERYEVESISRSIFDFK 62
P +++ DVT+ C V P W + +
Sbjct: 5 YEQKPEKVIVVKQGQDVTIPCKVTGLPAPNVVWSHNAKPLSGGR-----------ATVTD 53
Query: 63 MRLTIKKITKYDLGSYKCIAKNSLGEVESSIRL 95
L IK + D G Y C A N G+ +
Sbjct: 54 SGLVIKGVKNGDKGYYGCRATNEHGDKYFETLV 86
>d2cqva1 b.1.1.4 (A:8-108) Telokin {Human (Homo sapiens) [TaxId:
9606]}
Length = 101
Score = 57.9 bits (139), Expect = 4e-13
Identities = 17/94 (18%), Positives = 31/94 (32%), Gaps = 6/94 (6%)
Query: 2 PVIHVPNQLVGAPIDTDVTLECYVEAYPKSINYWVRDQGDMVISSERYEVESISRSIFDF 61
P I + V L V W++ + + S E + +
Sbjct: 1 PQIIQFPEDQKVRAGESVELFGKVTGTQPITCTWMKFRKQIQES------EHMKVENSEN 54
Query: 62 KMRLTIKKITKYDLGSYKCIAKNSLGEVESSIRL 95
+LTI + G Y + +N LG ++ + L
Sbjct: 55 GSKLTILAARQEHCGCYTLLVENKLGSRQAQVNL 88
>d1qz1a3 b.1.1.4 (A:190-289) Neural cell adhesion molecule (NCAM)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 100
Score = 57.6 bits (138), Expect = 5e-13
Identities = 28/96 (29%), Positives = 42/96 (43%), Gaps = 6/96 (6%)
Query: 2 PVIHVPNQLVG--APIDTDVTLECYVEAYPKSINYWVRDQGDMVISSERYEVESISRSIF 59
P + +V A + VTL C + +P+ W +D + E E +
Sbjct: 4 PTVQARQSIVNATANLGQSVTLVCDADGFPEPTMSWTKDGEPI----ENEEEDDEKHIFS 59
Query: 60 DFKMRLTIKKITKYDLGSYKCIAKNSLGEVESSIRL 95
D LTI+ + K D Y CIA+N GE ++SI L
Sbjct: 60 DDSSELTIRNVDKNDEAEYVCIAENKAGEQDASIHL 95
>d1koaa1 b.1.1.4 (A:6265-6361) Twitchin {Nematode (Caenorhabditis
elegans) [TaxId: 6239]}
Length = 97
Score = 54.9 bits (131), Expect = 5e-12
Identities = 20/94 (21%), Positives = 29/94 (30%), Gaps = 6/94 (6%)
Query: 2 PVIHVPNQLVGAPIDTDVTLECYVEAYPKSINYWVRDQGDMVISSERYEVESISRSIFDF 61
P V C V A + W +D ++ + +
Sbjct: 2 PRFIVKPYGTEVGEGQSANFYCRVIASSPPVVTWHKDDREL------KQSVKYMKRYNGN 55
Query: 62 KMRLTIKKITKYDLGSYKCIAKNSLGEVESSIRL 95
LTI ++ D G Y AKNS G E + L
Sbjct: 56 DYGLTINRVKGDDKGEYTVRAKNSYGTKEEIVFL 89
>d1g1ca_ b.1.1.4 (A:) Titin {Human (Homo sapiens), different
modules [TaxId: 9606]}
Length = 98
Score = 54.1 bits (129), Expect = 9e-12
Identities = 21/94 (22%), Positives = 27/94 (28%), Gaps = 5/94 (5%)
Query: 2 PVIHVPNQLVGAPIDTDVTLECYVEAYPKSINYWVRDQGDMVISSERYEVESISRSIFDF 61
P I Q +D V P W ++ + S Y D
Sbjct: 5 PKIFERIQSQTVGQGSDAHFRVRVVGKPDPECEWYKNGVKIERSDRIYWYWP-----EDN 59
Query: 62 KMRLTIKKITKYDLGSYKCIAKNSLGEVESSIRL 95
L I+ +T D S A N GE S L
Sbjct: 60 VCELVIRDVTGEDSASIMVKAINIAGETSSHAFL 93
>d1f97a2 b.1.1.4 (A:129-238) Junction adhesion molecule, JAM,
C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Length = 110
Score = 51.9 bits (123), Expect = 8e-11
Identities = 18/94 (19%), Positives = 29/94 (30%), Gaps = 3/94 (3%)
Query: 2 PVIHVPNQLVGAPIDTDVTLECYVEAYPKSINYWVRDQGDMVISSERYEVESISRSIFDF 61
P + I L C Y G +++++ + + S F
Sbjct: 3 PSKPTISVPSSVTIGNRAVLTCSEHDGSPPSEYSWFKDGISMLTADAKKTRAFMNSSFTI 62
Query: 62 KM---RLTIKKITKYDLGSYKCIAKNSLGEVESS 92
L +T +D G Y C A+N G S
Sbjct: 63 DPKSGDLIFDPVTAFDSGEYYCQAQNGYGTAMRS 96
>d1nbqa2 b.1.1.4 (A:130-233) Junction adhesion molecule, JAM,
C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 104
Score = 51.6 bits (122), Expect = 1e-10
Identities = 18/96 (18%), Positives = 30/96 (31%), Gaps = 2/96 (2%)
Query: 2 PVIHVPNQLVGAPIDTDVTLECYVEAYPKSINYWVRDQGDMVISSERYEVESI--SRSIF 59
P N A I L C + Y G ++ ++ + S +
Sbjct: 3 PSKPTVNIPSSATIGNRAVLTCSEQDGSPPSEYTWFKDGIVMPTNPKSTRAFSNSSYVLN 62
Query: 60 DFKMRLTIKKITKYDLGSYKCIAKNSLGEVESSIRL 95
L ++ D G Y C A+N G +S +
Sbjct: 63 PTTGELVFDPLSASDTGEYSCEARNGYGTPMTSNAV 98
>d2fdbp2 b.1.1.4 (P:2252-2360) Fibroblast growth factor receptor,
FGFR {Human (Homo sapiens), FGFR1 [TaxId: 9606]}
Length = 109
Score = 51.5 bits (122), Expect = 1e-10
Identities = 19/103 (18%), Positives = 33/103 (32%), Gaps = 8/103 (7%)
Query: 2 PVIHVPN-QLVGAPIDTDVTLECYVEAYPKSINYWVRDQGDMVISSE-------RYEVES 53
P++ + DV C V + + W++ + +
Sbjct: 5 PILQAGLPANASTVVGGDVEFVCKVYSDAQPHIQWIKHVEKNGSKYGPDGLPYLKVLKAA 64
Query: 54 ISRSIFDFKMRLTIKKITKYDLGSYKCIAKNSLGEVESSIRLY 96
+ L I+ +T D G Y C+A NS+G S L
Sbjct: 65 GVNTTDKEIEVLYIRNVTFEDAGEYTCLAGNSIGISFHSAWLT 107
>d1pkoa_ b.1.1.1 (A:) Myelin oligodendrocyte glycoprotein (MOG) {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 126
Score = 50.8 bits (120), Expect = 4e-10
Identities = 20/109 (18%), Positives = 37/109 (33%), Gaps = 17/109 (15%)
Query: 4 IHVPNQLVGAPIDTDVTLECYVEAYPKSINYWVR-----------------DQGDMVISS 46
+ P + A + + L C + + V DQ
Sbjct: 5 VIGPGHPIRALVGDEAELPCRISPGKNATGMEVGWYRSPFSRVVHLYRNGKDQDAEQAPE 64
Query: 47 ERYEVESISRSIFDFKMRLTIKKITKYDLGSYKCIAKNSLGEVESSIRL 95
R E + SI + K+ L I+ + D G Y C ++ + E+++ L
Sbjct: 65 YRGRTELLKESIGEGKVALRIQNVRFSDEGGYTCFFRDHSYQEEAAVEL 113
>d1cs6a1 b.1.1.4 (A:7-103) Axonin-1 {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 97
Score = 49.1 bits (116), Expect = 8e-10
Identities = 18/75 (24%), Positives = 29/75 (38%), Gaps = 7/75 (9%)
Query: 18 DVTLECYVEAYPKSINYWVRDQGDMVISSERYEVESISRSIFDFKMRLTIKKITKYDLGS 77
VTL C A P + W + ++ + + R + + D GS
Sbjct: 24 KVTLTCRARANPPATYRWKMNGTELKMGPDS-------RYRLVAGDLVISNPVKAKDAGS 76
Query: 78 YKCIAKNSLGEVESS 92
Y+C+A N+ G V S
Sbjct: 77 YQCVATNARGTVVSR 91
>d1cs6a3 b.1.1.4 (A:209-299) Axonin-1 {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 91
Score = 48.3 bits (114), Expect = 1e-09
Identities = 21/95 (22%), Positives = 31/95 (32%), Gaps = 13/95 (13%)
Query: 2 PVIHV-PNQLVGAPIDTDVTLECYVEAYPKSINYWVRDQGDMVISSERYEVESISRSIFD 60
P I A VTLEC+ P W + G +
Sbjct: 5 PSIKAKFPADTYALTGQMVTLECFAFGNPVPQIKWRKLDGSQ------------TSKWLS 52
Query: 61 FKMRLTIKKITKYDLGSYKCIAKNSLGEVESSIRL 95
+ L I+ + D G+Y+C A+N G R+
Sbjct: 53 SEPLLHIQNVDFEDEGTYECEAENIKGRDTYQGRI 87
>d1cs6a4 b.1.1.4 (A:300-388) Axonin-1 {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 89
Score = 48.3 bits (114), Expect = 1e-09
Identities = 22/94 (23%), Positives = 33/94 (35%), Gaps = 10/94 (10%)
Query: 2 PVIHVPNQLVGAPIDTDVTLECYVEAYPKSINYWVRDQGDMVISSERYEVESISRSIFDF 61
P A I +D+ C P+ W+RD + + I
Sbjct: 2 PDWLDVITDTEADIGSDLRWSCVASGKPRPAVRWLRDGQPL----------ASQNRIEVS 51
Query: 62 KMRLTIKKITKYDLGSYKCIAKNSLGEVESSIRL 95
L K+ D G Y+C+A+N G V +S L
Sbjct: 52 GGELRFSKLVLEDSGMYQCVAENKHGTVYASAEL 85
>d1rhfa1 b.1.1.1 (A:7-97) Tyrosine-protein kinase receptor tyro3,
N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 91
Score = 48.0 bits (113), Expect = 2e-09
Identities = 21/87 (24%), Positives = 33/87 (37%), Gaps = 10/87 (11%)
Query: 12 GAPIDT------DVTLECYVEAYPKSINYWVRDQGDMVISSERYEVESISRSIFDFKMRL 65
GAP+ V L C VE + WV+D + + Y I S + L
Sbjct: 1 GAPVKLTVSQGQPVKLNCSVEGMEEPDIQWVKDGAVVQNLDQLY----IPVSEQHWIGFL 56
Query: 66 TIKKITKYDLGSYKCIAKNSLGEVESS 92
++K + + D G Y C ++ S
Sbjct: 57 SLKSVERSDAGRYWCQVEDGGETEISQ 83
>d1tnna_ b.1.1.4 (A:) Titin {Human (Homo sapiens), different
modules [TaxId: 9606]}
Length = 91
Score = 47.9 bits (113), Expect = 2e-09
Identities = 15/78 (19%), Positives = 27/78 (34%), Gaps = 6/78 (7%)
Query: 18 DVTLECYVEAYPKSINYWVRDQGDMVISSERYEVESISRSIFDFKMRLTIKKITKYDLGS 77
C + P W+R + S+ + +K I + D G+
Sbjct: 16 SARFSCDTDGEPVPTVTWLRKGQVLSTSARHQ------VTTTKYKSTFEISSVQASDEGN 69
Query: 78 YKCIAKNSLGEVESSIRL 95
Y + +NS G+ E+ L
Sbjct: 70 YSVVVENSEGKQEAEFTL 87
>d1wwbx_ b.1.1.4 (X:) Ligand binding domain of trkB receptor
{Human (Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 48.0 bits (113), Expect = 2e-09
Identities = 19/95 (20%), Positives = 32/95 (33%), Gaps = 4/95 (4%)
Query: 4 IHVP---NQLVGAPIDTDVTLECYVEAYPKSINYWVRDQGDMVISSERYEVESISRSIFD 60
+H L D + V+ PK W + + S + + + +
Sbjct: 1 VHFAPTITFLESPTSDHHWCIPFTVKGNPKPALQWFYNGAILNES-KYICTKIHVTNHTE 59
Query: 61 FKMRLTIKKITKYDLGSYKCIAKNSLGEVESSIRL 95
+ L + T + G Y IAKN G+ E I
Sbjct: 60 YHGCLQLDNPTHMNNGDYTLIAKNEYGKDEKQISA 94
>d1iray3 b.1.1.4 (Y:205-311) Type-1 interleukin-1 receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 107
Score = 48.2 bits (113), Expect = 2e-09
Identities = 19/101 (18%), Positives = 34/101 (33%), Gaps = 7/101 (6%)
Query: 2 PVIHVPNQLVGAPIDTDVTLECYVEAYPKSINYWVRDQGDMVISSERYEVESISRSIFDF 61
++ N+ + + + + L C V I YW + + + S
Sbjct: 3 VIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPAN 62
Query: 62 KM------RLTIKKITKYDLGS-YKCIAKNSLGEVESSIRL 95
K L I +I + C AKN+ G + I+L
Sbjct: 63 KRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQL 103
>d3b5ha1 b.1.1.4 (A:103-203) Cervical EMMPRIN {Human (Homo
sapiens) [TaxId: 9606]}
Length = 101
Score = 47.7 bits (112), Expect = 3e-09
Identities = 19/101 (18%), Positives = 31/101 (30%), Gaps = 12/101 (11%)
Query: 2 PVIHVPNQLVGAPIDTDVTLECYVEAYPKSINYWVRDQGDM------VISSERYEVESIS 55
P + L C E+ P ++ D S R+ V S
Sbjct: 3 PRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSS-- 60
Query: 56 RSIFDFKMRLTIKKITKYDL-GSYKCIAKNSLGEVESSIRL 95
+ L I+ + G Y+C +S G ++ I L
Sbjct: 61 ---SQGRSELHIENLNMEADPGQYRCNGTSSKGSDQAIITL 98
>d1biha1 b.1.1.4 (A:5-98) Hemolin {Moth (Hyalophora cecropia)
[TaxId: 7123]}
Length = 94
Score = 47.7 bits (112), Expect = 3e-09
Identities = 18/92 (19%), Positives = 30/92 (32%), Gaps = 6/92 (6%)
Query: 2 PVIHVPNQLVGAPIDTDVTLECYVEAYPKSINYWVRDQGDMVISSERYEVESISRSIFDF 61
PV+ V + LEC +E + + Y + G E +
Sbjct: 3 PVLKDQPAEVLFRENNPTVLECIIEGNDQGVKYSWKKDGKSYNWQEHNAA------LRKD 56
Query: 62 KMRLTIKKITKYDLGSYKCIAKNSLGEVESSI 93
+ L + D G Y+C A+ G S +
Sbjct: 57 EGSLVFLRPQASDEGHYQCFAETPAGVASSRV 88
>d1fhga_ b.1.1.4 (A:) Telokin {Turkey (Meleagris gallopavo)
[TaxId: 9103]}
Length = 102
Score = 47.6 bits (112), Expect = 3e-09
Identities = 22/94 (23%), Positives = 31/94 (32%), Gaps = 5/94 (5%)
Query: 2 PVIHVPNQLVGAPIDTDVTLECYVEAYPKSINYWVRDQGDMVISSERYEVESISRSIFDF 61
P + + +C VE YP W +D + S +
Sbjct: 9 PYFTKTILDMEVVEGSAARFDCKVEGYPDPEVMWFKDDNPVKESRHFQI-----DYDEEG 63
Query: 62 KMRLTIKKITKYDLGSYKCIAKNSLGEVESSIRL 95
LTI ++ D Y C A NSLGE + L
Sbjct: 64 NCSLTISEVCGDDDAKYTCKAVNSLGEATCTAEL 97
>d1he7a_ b.1.1.4 (A:) High affinity nerve growth factor receptor
TrkA, different domains {Human (Homo sapiens) [TaxId:
9606]}
Length = 107
Score = 47.2 bits (111), Expect = 5e-09
Identities = 16/94 (17%), Positives = 35/94 (37%), Gaps = 3/94 (3%)
Query: 5 HVP-NQLVGAPID-TDVTLECYVEAYPKSINYWVRDQGDMV-ISSERYEVESISRSIFDF 61
H+P + + ++ + V+ P W+ + + S E + +
Sbjct: 2 HMPASVQLHTAVEMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVR 61
Query: 62 KMRLTIKKITKYDLGSYKCIAKNSLGEVESSIRL 95
L + + T + G+Y +A N G+ +SI
Sbjct: 62 HGCLRLNQPTHVNNGNYTLLAANPFGQASASIMA 95
>d1wiua_ b.1.1.4 (A:) Twitchin {Nematode (Caenorhabditis elegans)
[TaxId: 6239]}
Length = 93
Score = 44.6 bits (104), Expect = 4e-08
Identities = 17/94 (18%), Positives = 27/94 (28%), Gaps = 6/94 (6%)
Query: 2 PVIHVPNQLVGAPIDTDVTLECYVEAYPKSINYWVRDQGDMVISSERYEVESISRSIFDF 61
P I ++ + LE P W ++ E
Sbjct: 3 PKILTASRKIKIKAGFTHNLEVDFIGAPDPTATWTVGDSGAALAPELLVDAK------SS 56
Query: 62 KMRLTIKKITKYDLGSYKCIAKNSLGEVESSIRL 95
+ + D G+YK KN LGE E+ +
Sbjct: 57 TTSIFFPSAKRADSGNYKLKVKNELGEDEAIFEV 90
>d1n26a1 b.1.1.4 (A:1-93) Interleukin-6 receptor alpha chain,
N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 93
Score = 44.1 bits (103), Expect = 6e-08
Identities = 14/95 (14%), Positives = 26/95 (27%), Gaps = 11/95 (11%)
Query: 2 PVIHVPNQLVGAPIDTDVTLECYVEAYPKSINYWVRDQGDMVISSERYEVESISRSIFDF 61
P V ++ + VTL C + + S
Sbjct: 7 PAQEVARGVLTSLPGDSVTLTCPGVEPEDNATVHWVLRKPAAGSHPSR--------WAGM 58
Query: 62 KMRLTIKKITKYDLGSYKCIAKNSLGEVESSIRLY 96
RL ++ + +D G+Y C ++ L
Sbjct: 59 GRRLLLRSVQLHDSGNYSCYRAGRPA---GTVHLL 90
>d2crya1 b.1.1.1 (A:8-122) Kin of IRRE-like protein 3, KIRREL3
{Human (Homo sapiens) [TaxId: 9606]}
Length = 115
Score = 44.7 bits (104), Expect = 7e-08
Identities = 19/96 (19%), Positives = 28/96 (29%), Gaps = 2/96 (2%)
Query: 2 PVIHVPNQLVGAPIDTDVTLECYVEAYPKSINYWV-RDQGDMVISSERYEVESISRSIFD 60
P I Q A ++C++ + P + + + +
Sbjct: 7 PPIISSTQTQHALHGEKGQIKCFIRSTPPPDRIAWSWKENVLESGTSGRYTVETISTEEG 66
Query: 61 FKMRLTIKKIT-KYDLGSYKCIAKNSLGEVESSIRL 95
LTI I Y C A NS G IRL
Sbjct: 67 VISTLTISNIVRADFQTIYNCTAWNSFGSDTEIIRL 102
>d1gxea_ b.1.1.4 (A:) Cardiac myosin binding protein C, different
domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 130
Score = 44.3 bits (103), Expect = 1e-07
Identities = 13/101 (12%), Positives = 29/101 (28%), Gaps = 23/101 (22%)
Query: 18 DVTLECYVEAYPKSINYWVRDQGDMVISSERYEVESISRSIF------------------ 59
+ L+ + P W + + R ++ +
Sbjct: 26 KLRLDVPISGDPAPTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLCETEGRV 85
Query: 60 -----DFKMRLTIKKITKYDLGSYKCIAKNSLGEVESSIRL 95
+ T++ K D G Y KN +GE + ++ +
Sbjct: 86 RVETTKDRSIFTVEGAEKEDEGVYTVTVKNPVGEDQVNLTV 126
>d1nbqa1 b.1.1.1 (A:25-129) Junction adhesion molecule, JAM,
N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 105
Score = 43.6 bits (101), Expect = 1e-07
Identities = 20/96 (20%), Positives = 32/96 (33%), Gaps = 2/96 (2%)
Query: 2 PVIHVPNQLVGAPIDTDVTLECYVEAYPKSINYWVRDQGDMVI--SSERYEVESISRSIF 59
+H V P + V L C + W DQGD S +
Sbjct: 5 VTVHSSEPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVT 64
Query: 60 DFKMRLTIKKITKYDLGSYKCIAKNSLGEVESSIRL 95
+T K +T+ D G+Y C+ G +++
Sbjct: 65 FLPTGITFKSVTREDTGTYTCMVSEEGGNSYGEVKV 100
>d1epfa2 b.1.1.4 (A:98-189) Neural cell adhesion molecule (NCAM)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 92
Score = 43.0 bits (100), Expect = 2e-07
Identities = 14/79 (17%), Positives = 26/79 (32%), Gaps = 7/79 (8%)
Query: 17 TDVTLECYVEAYPKSINYWVRDQGDMVISSERYEVESISRSIFDFKMRLTIKKITKYDLG 76
D + C V + W D+++ + I L I+ I K D G
Sbjct: 17 EDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRF-------IVLSNNYLQIRGIKKTDEG 69
Query: 77 SYKCIAKNSLGEVESSIRL 95
+Y+C + + +
Sbjct: 70 TYRCEGRILARGEINFKDI 88
>d1gl4b_ b.1.1.4 (B:) Perlecan Ig3 domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 89
Score = 42.3 bits (98), Expect = 3e-07
Identities = 15/80 (18%), Positives = 27/80 (33%), Gaps = 10/80 (12%)
Query: 17 TDVTLECYVEAYPKSINYWVRDQGDMVISSERYEVESISRSIFDFKMRLTIKKITKYDLG 76
DVT C ++ + + + S + I LTI+ + D G
Sbjct: 18 ADVTFICTAKSKSPAYTLVWTRLHNGKLPSRAMDFNGI----------LTIRNVQPSDAG 67
Query: 77 SYKCIAKNSLGEVESSIRLY 96
+Y C N + + L+
Sbjct: 68 TYVCTGSNMFAMDQGTATLH 87
>d2avga1 b.1.1.4 (A:1-110) Cardiac myosin binding protein C,
different domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 110
Score = 41.6 bits (96), Expect = 9e-07
Identities = 13/100 (13%), Positives = 25/100 (25%), Gaps = 6/100 (6%)
Query: 2 PVIHVPNQLVGAPIDTDVTLECYVEAYPKSIN---YWVRDQGDMVISSERYEVESISRSI 58
+ + Q + +T V W + + + S ++
Sbjct: 5 GLFVMRPQDGEVTVGGSITFSARVAGASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDSYD 64
Query: 59 FDFKM---RLTIKKITKYDLGSYKCIAKNSLGEVESSIRL 95
K+ L I G Y+C S+ L
Sbjct: 65 RASKVYLFELHITDAQPAFTGGYRCEVSTKDKFDCSNFNL 104
>d1wwca_ b.1.1.4 (A:) NT3 binding domain of trkC receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 105
Score = 41.5 bits (96), Expect = 1e-06
Identities = 21/95 (22%), Positives = 37/95 (38%), Gaps = 5/95 (5%)
Query: 4 IHVPNQLVGAP---IDTDVTLECYVEAYPKSINYWVRDQGDMVISSERYEVESISRSIFD 60
++ P ++V + + +E V P +W+ + + S + I +
Sbjct: 2 VYYPPRVVSLEEPELRLEHCIEFVVRGNPPPTLHWLHNGQPLRESKIIHVEYYQEGEISE 61
Query: 61 FKMRLTIKKITKYDLGSYKCIAKNSLGEVESSIRL 95
L K T Y+ G+Y IAKN LG +I
Sbjct: 62 --GCLLFNKPTHYNNGNYTLIAKNPLGTANQTING 94
>d1biha3 b.1.1.4 (A:210-306) Hemolin {Moth (Hyalophora cecropia)
[TaxId: 7123]}
Length = 97
Score = 40.7 bits (94), Expect = 1e-06
Identities = 20/95 (21%), Positives = 36/95 (37%), Gaps = 5/95 (5%)
Query: 2 PVIHVPNQLVGAPIDTDVTLECYVEAYPKSINYWVRDQGDMVISSERYEVESISRSIFDF 61
PV ++ + A + C + P + ++ D+ + E I+R
Sbjct: 4 PVPQYVSKDMMAKAGDVTMIYCMYGSNPMGYPNYFKNGKDVNGNPEDR----ITRHNRTS 59
Query: 62 KMRLTIKKITKYDLGSYKCIAKNSLGEVES-SIRL 95
RL K D G Y C N +G+ + S++L
Sbjct: 60 GKRLLFKTTLPEDEGVYTCEVDNGVGKPQKHSLKL 94
>d2dava1 b.1.1.4 (A:8-120) Myosin-binding protein C, slow-type
{Human (Homo sapiens) [TaxId: 9606]}
Length = 113
Score = 40.4 bits (93), Expect = 2e-06
Identities = 13/85 (15%), Positives = 26/85 (30%), Gaps = 6/85 (7%)
Query: 17 TDVTLECYVEAYPKS----INYWVRDQGDMVISSERYEVESISRSIF--DFKMRLTIKKI 70
D+T V+A I ++ D+ + ++ + + + I K
Sbjct: 16 EDITFIAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQLKETFERHSRVYTFEMQIIKA 75
Query: 71 TKYDLGSYKCIAKNSLGEVESSIRL 95
G+Y+C S L
Sbjct: 76 KDNFAGNYRCEVTYKDKFDSCSFDL 100
>d1f97a1 b.1.1.1 (A:27-128) Junction adhesion molecule, JAM,
N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Length = 102
Score = 40.5 bits (93), Expect = 2e-06
Identities = 14/96 (14%), Positives = 28/96 (29%), Gaps = 2/96 (2%)
Query: 2 PVIHVPNQLVGAPIDTDVTLECYVEAYPKSINYWVRDQGDMVISS--ERYEVESISRSIF 59
++ V P + + L C + W QG + +
Sbjct: 2 GSVYTAQSDVQVPENESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVT 61
Query: 60 DFKMRLTIKKITKYDLGSYKCIAKNSLGEVESSIRL 95
+T +T+ D G Y C+ G+ + +
Sbjct: 62 FSSSGITFSSVTRKDNGEYTCMVSEEGGQNYGEVSI 97
>d1x44a1 b.1.1.4 (A:8-97) Myosin-binding protein C, slow-type
{Human (Homo sapiens) [TaxId: 9606]}
Length = 90
Score = 39.0 bits (90), Expect = 6e-06
Identities = 16/83 (19%), Positives = 29/83 (34%), Gaps = 5/83 (6%)
Query: 13 APIDTDVTLECYVEAYPKSINYWVRDQGDMVISSERYEVESISRSIFDFKMRLTIKKITK 72
A V LEC V + + W ++ +++ + + K L I+ TK
Sbjct: 12 AYCGERVELECEV-SEDDANVKWFKNGEEIIPGPKSRYRIRVEGK----KHILIIEGATK 66
Query: 73 YDLGSYKCIAKNSLGEVESSIRL 95
D Y + + S+ L
Sbjct: 67 ADAAEYSVMTTGGQSSAKLSVDL 89
>d2c9aa1 b.1.1.4 (A:184-279) Receptor-type tyrosine-protein
phosphatase mu {Human (Homo sapiens) [TaxId: 9606]}
Length = 96
Score = 38.9 bits (89), Expect = 6e-06
Identities = 13/75 (17%), Positives = 24/75 (32%), Gaps = 3/75 (4%)
Query: 18 DVTLECYVEAYPKSINYWVRDQGDMVISSERYEVESISRSIFDFKMRLTIKKITKYDLGS 77
T +C + + D+ + + S F + TK D G
Sbjct: 18 FATFQCSAIGRTVAGDRLWLQGIDVRDAPLKEI---KVTSSRRFIASFNVVNTTKRDAGK 74
Query: 78 YKCIAKNSLGEVESS 92
Y+C+ + G S+
Sbjct: 75 YRCMIRTEGGVGISN 89
>d1ccza1 b.1.1.1 (A:1-93) CD2-binding domain of CD58, N-terminal
domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 93
Score = 38.7 bits (89), Expect = 6e-06
Identities = 12/89 (13%), Positives = 29/89 (32%), Gaps = 3/89 (3%)
Query: 9 QLVGAPIDTDVTLECYVEAYPKSINYWVRDQGDMVISSERYEVESISRSIFDFKMR---L 65
Q + + +VT K + + + + + + S ++ L
Sbjct: 3 QQIYGVVYGNVTFHVPSNVPLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVSGSL 62
Query: 66 TIKKITKYDLGSYKCIAKNSLGEVESSIR 94
TI +T D Y+ + N ++ +
Sbjct: 63 TIYNLTSSDEDEYEMESPNITDTMKFFLY 91
>d2aw2a1 b.1.1.1 (A:34-137) B- and T-lymphocyte attenuator CD272
{Human (Homo sapiens) [TaxId: 9606]}
Length = 104
Score = 38.1 bits (87), Expect = 2e-05
Identities = 14/75 (18%), Positives = 20/75 (26%)
Query: 18 DVTLECYVEAYPKSINYWVRDQGDMVISSERYEVESISRSIFDFKMRLTIKKITKYDLGS 77
LEC V+ + S L + + D GS
Sbjct: 20 PFELECPVKYCANRPHVTWCKLNGTTCVKLEDRQTSWKEEKNISFFILHFEPVLPNDNGS 79
Query: 78 YKCIAKNSLGEVESS 92
Y+C A +ES
Sbjct: 80 YRCSANFQSNLIESH 94
>d2oz4a3 b.1.1.4 (A:367-450) Intercellular adhesion molecule-1,
ICAM-1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 84
Score = 35.7 bits (81), Expect = 8e-05
Identities = 12/79 (15%), Positives = 24/79 (30%), Gaps = 19/79 (24%)
Query: 17 TDVTLECYVEAYPKSINYWVRDQGDMVISSERYEVESISRSIFDFKMRLTIKKITKYDLG 76
+ T C P ++D + +T+ G
Sbjct: 20 SQQTPMCQAWGNPLPELKCLKDGTFPLPIG-------------------ESVTVTRDLEG 60
Query: 77 SYKCIAKNSLGEVESSIRL 95
+Y C A+++ GEV + +
Sbjct: 61 TYLCRARSTQGEVTREVTV 79
>d1l6za2 b.1.1.4 (A:108-203) Biliary glycoprotein C (CD66a,
CEACAM1A[1,4]), C-terminal domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 96
Score = 35.4 bits (80), Expect = 1e-04
Identities = 22/95 (23%), Positives = 32/95 (33%), Gaps = 12/95 (12%)
Query: 2 PVIHVPNQLVGAPIDTDVTLECYVEAYPKSINYWVRDQGDMVISSERYEVESISRSIFDF 61
P + V N V VTL C +I + Q + ++
Sbjct: 6 PFLQVTNTTVKE--LDSVTLTCLSNDIGANIQWLFNSQSLQ---------LTERMTLSQN 54
Query: 62 KMRLTIKKITKYDLGSYKCIAKNSLGEVES-SIRL 95
L I I + D G Y+C N + S SI+L
Sbjct: 55 NSILRIDPIKREDAGEYQCEISNPVSVRRSNSIKL 89
>d1hnga1 b.1.1.1 (A:2-99) CD2, first domain {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 98
Score = 33.5 bits (76), Expect = 7e-04
Identities = 14/88 (15%), Positives = 28/88 (31%), Gaps = 3/88 (3%)
Query: 8 NQLVGAPIDTDVTLECYVEAYPKSINY--WVRDQGDMVISSERYEVESISRSIFDFKM-R 64
+ V + + L I+ W R + + + S +
Sbjct: 2 SGTVWGALGHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEILANGD 61
Query: 65 LTIKKITKYDLGSYKCIAKNSLGEVESS 92
L IK +T+ D G+Y ++ G +
Sbjct: 62 LKIKNLTRDDSGTYNVTVYSTNGTRILN 89
>d1pd6a_ b.1.1.4 (A:) Cardiac myosin binding protein C, different
domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 94
Score = 33.3 bits (75), Expect = 0.001
Identities = 11/77 (14%), Positives = 25/77 (32%), Gaps = 6/77 (7%)
Query: 18 DVTLECYVEAYPKSINYWVRDQGDMVISSERYEVESISRSIFDFKMRLTIKKITKYDLGS 77
+ L + + + + Q + S+ K LTI + + D +
Sbjct: 23 KIRLTVELADHDAEVKWLKNGQEIQMSGSKYIFESI------GAKRTLTISQCSLADDAA 76
Query: 78 YKCIAKNSLGEVESSIR 94
Y+C+ E ++
Sbjct: 77 YQCVVGGEKCSTELFVK 93
>d1cs6a2 b.1.1.4 (A:104-208) Axonin-1 {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 105
Score = 33.1 bits (74), Expect = 0.001
Identities = 13/76 (17%), Positives = 23/76 (30%), Gaps = 5/76 (6%)
Query: 18 DVTLECYVEAYPKSINYWVRDQGDMVISSERYEVESISRSIFDFKMRLTIKKITKYDLGS 77
V C + +++Y + L I K DLG+
Sbjct: 21 GVMFTCSPPPHYPALSYRWLLNEFPNFIPADGRRFVSQTT-----GNLYIAKTEASDLGN 75
Query: 78 YKCIAKNSLGEVESSI 93
Y C A + + + S+
Sbjct: 76 YSCFATSHIDFITKSV 91
>d1rhfa2 b.1.1.4 (A:98-182) Tyrosine-protein kinase receptor
tyro3, second domain {Human (Homo sapiens) [TaxId:
9606]}
Length = 85
Score = 32.6 bits (73), Expect = 0.001
Identities = 11/91 (12%), Positives = 19/91 (20%), Gaps = 14/91 (15%)
Query: 2 PVIHVPNQLVGAPIDTDVTLECYVEAYPKSINYWVRDQGDMVISSERYEVESISRSIFDF 61
P V + + P + L C P+ + +
Sbjct: 2 PFFTVEPKDLAVPPNAPFQLSCEAVGPPEPVTIVWWRGTTKIGGPAP------------- 48
Query: 62 KMRLTIKKITKYDLGSYKCIAKNSLGEVESS 92
+ + C A N G S
Sbjct: 49 -SPSVLNVTGVTQSTMFSCEAHNLKGLASSR 78
>d1iray2 b.1.1.4 (Y:102-204) Type-1 interleukin-1 receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 32.5 bits (73), Expect = 0.002
Identities = 14/88 (15%), Positives = 29/88 (32%), Gaps = 15/88 (17%)
Query: 14 PIDTDVTLECYVEAYPKSIN------YWVRDQGDMVISSERYEVESISRSIFDFKMRLTI 67
P+ D L C + K+ N W +D +++ + + L +
Sbjct: 12 PVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHFSGVKDR---------LIV 62
Query: 68 KKITKYDLGSYKCIAKNSLGEVESSIRL 95
+ + G+Y C A + + I
Sbjct: 63 MNVAEKHRGNYTCHASYTYLGKQYPITR 90
>d1iray1 b.1.1.4 (Y:1-101) Type-1 interleukin-1 receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 101
Score = 32.6 bits (73), Expect = 0.002
Identities = 16/84 (19%), Positives = 27/84 (32%), Gaps = 7/84 (8%)
Query: 13 APIDTDVTLECYVEA-YPKSINYWVRDQGDMVISSERYEVESISRSIFDFKMRLTIKKIT 71
+ + C + K W +D +S+E+ I K +L
Sbjct: 14 SSANEIDVRPCPLNPNEHKGTITWYKDDSKTPVSTEQA------SRIHQHKEKLWFVPAK 67
Query: 72 KYDLGSYKCIAKNSLGEVESSIRL 95
D G Y C+ +NS + I
Sbjct: 68 VEDSGHYYCVVRNSSYCLRIKISA 91
>d1olza1 b.1.1.4 (A:537-628) Semaphorin 4d Ig-like domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 92
Score = 31.9 bits (71), Expect = 0.003
Identities = 9/78 (11%), Positives = 28/78 (35%), Gaps = 9/78 (11%)
Query: 18 DVTLECYVEAYPKSINYWVRDQGDMVISSERYEVESISRSIFDFKMRLTIKKITKYDLGS 77
L+C ++ + + ++ S + + + L I +++ D G
Sbjct: 14 TAELKCSQKSNLARVFWKFQNGVLKAESPKYGLM---------GRKNLLIFNLSEGDSGV 64
Query: 78 YKCIAKNSLGEVESSIRL 95
Y+C+++ + +
Sbjct: 65 YQCLSEERVKNKTVFQVV 82
>d1iama1 b.1.1.3 (A:83-185) Intercellular cell adhesion molecule-1
(ICAM-1) {Human (Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 31.8 bits (71), Expect = 0.004
Identities = 11/97 (11%), Positives = 27/97 (27%), Gaps = 12/97 (12%)
Query: 2 PVIHVPNQLVGAPIDTDVTLECYVEA---YPKSINYWVRDQGDMVISSERYEVESISRSI 58
+ + P+ +TL C VE + +R + ++ E ++
Sbjct: 5 ERVELAPLPSWQPVGKQLTLRCQVEGGAPRAQLTVVLLRGEKELKREPAVGEPAEVT--- 61
Query: 59 FDFKMRLTIKKITKYDLGSYKCIAKNSLGEVESSIRL 95
T+ + + C + L +
Sbjct: 62 ------TTVLVRRDHHGAQFSCRTELDLRPQGLELFE 92
>d1gsma1 b.1.1.4 (A:1-90) Mucosal addressin cell adhesion
molecule-1 (MADCAM-1) {Human (Homo sapiens) [TaxId:
9606]}
Length = 90
Score = 31.2 bits (69), Expect = 0.005
Identities = 10/94 (10%), Positives = 28/94 (29%), Gaps = 10/94 (10%)
Query: 2 PVIHVPNQLVGAPIDTDVTLECYVEAYPKSINYWVRDQGDMVISSERYEVESISRSIFDF 61
+ P +V + L C + + + R + +
Sbjct: 4 LQVEPPEPVVAVALGASRQLTCRLACADRGASVQWRGLDTSLGA----------VQSDTG 53
Query: 62 KMRLTIKKITKYDLGSYKCIAKNSLGEVESSIRL 95
+ LT++ + G+ C+ + +++L
Sbjct: 54 RSVLTVRNASLSAAGTRVCVGSCGGRTFQHTVQL 87
>d1zxqa1 b.1.1.3 (A:87-192) Intercellular cell adhesion molecule-2
(ICAM-2) {Human (Homo sapiens) [TaxId: 9606]}
Length = 106
Score = 31.1 bits (69), Expect = 0.006
Identities = 10/97 (10%), Positives = 25/97 (25%), Gaps = 7/97 (7%)
Query: 2 PVIHVPNQLVGAPIDTDVTLECYVE---AYPKSINYWVRDQGDMVISSERYEVESISRSI 58
+ + Q + T+EC V + R + + + +
Sbjct: 3 RQVILTLQPTLVAVGKSFTIECRVPTVEPLDSLTLFLFRGNETLHYETFGK----AAPAP 58
Query: 59 FDFKMRLTIKKITKYDLGSYKCIAKNSLGEVESSIRL 95
+ + ++ C+A L +I
Sbjct: 59 QEATATFNSTADREDGHRNFSCLAVLDLMSRGGNIFH 95
>d2ifga1 b.1.1.4 (A:192-283) High affinity nerve growth factor
receptor TrkA, different domains {Human (Homo sapiens)
[TaxId: 9606]}
Length = 92
Score = 30.9 bits (68), Expect = 0.007
Identities = 15/94 (15%), Positives = 29/94 (30%), Gaps = 7/94 (7%)
Query: 2 PVIHVPNQLVGAPIDTDVTLECYVEAYPKSINYWVRDQGDMVISSERYEVESISRSIFDF 61
P + V + DV L C VE W+ + + + +
Sbjct: 3 PTLKVQVPNASVDVGDDVLLRCQVEGRGLEQAGWILTELEQSATVMKSGGLPSLGLTLAN 62
Query: 62 KMRLTIKKITKYDLGSYKCIAKNSLGEVESSIRL 95
+ + C A+N +G E S+++
Sbjct: 63 VTS-------DLNRKNVTCWAENDVGRAEVSVQV 89
>d1biha2 b.1.1.4 (A:99-209) Hemolin {Moth (Hyalophora cecropia)
[TaxId: 7123]}
Length = 111
Score = 30.4 bits (67), Expect = 0.013
Identities = 15/81 (18%), Positives = 25/81 (30%), Gaps = 2/81 (2%)
Query: 18 DVTLECYVEAYPK--SINYWVRDQGDMVISSERYEVESISRSIFDFKMRLTIKKITKYDL 75
L+C + I + R G + I+ + K D+
Sbjct: 19 PFQLDCVLPNAYPKPLITWKKRLSGADPNADVTDFDRRITAGPDGNLYFTIVTKEDVSDI 78
Query: 76 GSYKCIAKNSLGEVESSIRLY 96
Y C AKN+ + E + Y
Sbjct: 79 YKYVCTAKNAAVDEEVVLVEY 99
>d1f2qa2 b.1.1.4 (A:86-174) IgE high affinity receptor alpha
subunit {Human (Homo sapiens) [TaxId: 9606]}
Length = 89
Score = 30.0 bits (66), Expect = 0.015
Identities = 10/62 (16%), Positives = 20/62 (32%)
Query: 31 SINYWVRDQGDMVISSERYEVESISRSIFDFKMRLTIKKITKYDLGSYKCIAKNSLGEVE 90
+ + + Y + + + ++I T D G+Y C K + E
Sbjct: 17 PLFLRCHGWRNWDVYKVIYYKDGEALKYWYENHNISITNATVEDSGTYYCTGKVWQLDYE 76
Query: 91 SS 92
S
Sbjct: 77 SE 78
>d1epfa1 b.1.1.4 (A:1-97) Neural cell adhesion molecule (NCAM)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 97
Score = 30.0 bits (66), Expect = 0.016
Identities = 16/91 (17%), Positives = 28/91 (30%), Gaps = 6/91 (6%)
Query: 4 IHVPNQLVGAPIDTDVTLECYVEA--YPKSINYWVRDQGDMVISSERYEVESISRSIFDF 61
+ + + C V K I+++ + + + +R V D
Sbjct: 3 VDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISV----VWNDDD 58
Query: 62 KMRLTIKKITKYDLGSYKCIAKNSLGEVESS 92
LTI D G YKC+ G +
Sbjct: 59 SSTLTIYNANIDDAGIYKCVVTAEDGTQSEA 89
>d1eaja_ b.1.1.1 (A:) Coxsackie virus and adenovirus receptor (Car),
domain 1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 124
Score = 29.9 bits (66), Expect = 0.019
Identities = 18/114 (15%), Positives = 31/114 (27%), Gaps = 22/114 (19%)
Query: 4 IHVPNQLVGAPIDTDVTLECYVEAYPKS----------------------INYWVRDQGD 41
I P +++ L C P+ I Y D
Sbjct: 7 ITTPEEMIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPADNQKVDQVIILYSGDKIYD 66
Query: 42 MVISSERYEVESISRSIFDFKMRLTIKKITKYDLGSYKCIAKNSLGEVESSIRL 95
+ V S + + + + D+G+Y+C K + G I L
Sbjct: 67 DYYPDLKGRVHFTSNDLKSGDASINVTNLQLSDIGTYQCKVKKAPGVANKKIHL 120
>d2nxyb1 b.1.1.1 (B:1001-1097) CD4 V-set domains {Human (Homo
sapiens) [TaxId: 9606]}
Length = 97
Score = 29.4 bits (65), Expect = 0.031
Identities = 15/93 (16%), Positives = 26/93 (27%), Gaps = 11/93 (11%)
Query: 9 QLVGAPIDTDVTLECYVEAYPKSINYWVRDQGDMVI-----------SSERYEVESISRS 57
++V V L C +W ++ S +S
Sbjct: 2 KVVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSL 61
Query: 58 IFDFKMRLTIKKITKYDLGSYKCIAKNSLGEVE 90
L IK + D +Y C ++ EV+
Sbjct: 62 WDQGNFPLIIKNLKIEDSDTYICEVEDQKEEVQ 94
>d2fcba2 b.1.1.4 (A:91-178) Fc gamma receptor ectodomain (CD32)
{Human (Homo sapiens), IIb [TaxId: 9606]}
Length = 88
Score = 28.0 bits (61), Expect = 0.085
Identities = 10/75 (13%), Positives = 14/75 (18%), Gaps = 13/75 (17%)
Query: 18 DVTLECYVEAYPKSINYWVRDQGDMVISSERYEVESISRSIFDFKMRLTIKKITKYDLGS 77
+ L C+ + G S SI + G
Sbjct: 17 TIVLRCHSWKDKPLVKVTFFQNGKSKKFSRSDPNFSIP-------------QANHSHSGD 63
Query: 78 YKCIAKNSLGEVESS 92
Y C S
Sbjct: 64 YHCTGNIGYTLYSSK 78
>d1o0va1 b.1.1.2 (A:228-330) Immunoglobulin heavy chain epsilon
constant domain 2, CH2-epsilon {Human (Homo sapiens)
[TaxId: 9606]}
Length = 104
Score = 28.1 bits (62), Expect = 0.086
Identities = 12/77 (15%), Positives = 24/77 (31%), Gaps = 1/77 (1%)
Query: 19 VTLECYVEA-YPKSINYWVRDQGDMVISSERYEVESISRSIFDFKMRLTIKKITKYDLGS 77
+ L C V P +I + G ++ + + + LT+ + +
Sbjct: 24 IQLLCLVSGYTPGTIQITWLEDGQVMDVDLSTASTTQEGELASTQSELTLSQKHWLSDRT 83
Query: 78 YKCIAKNSLGEVESSIR 94
Y C E S +
Sbjct: 84 YTCQVTYQGHTFEDSTK 100
>d1tiua_ b.1.1.4 (A:) Twitchin {Human (Homo sapiens), Ig repeat 27
[TaxId: 9606]}
Length = 89
Score = 27.8 bits (61), Expect = 0.098
Identities = 7/73 (9%), Positives = 13/73 (17%), Gaps = 7/73 (9%)
Query: 18 DVTLECYVEAYPKSINYWVRDQGDMVISSERYEVESISRSIFDFKMRLTIKKITKYDLGS 77
E + + ++ Q K L + G
Sbjct: 18 TAHFEIELSEPDVHGQWKLKGQPLT-------ASPDCEIIEDGKKHILILHNCQLGMTGE 70
Query: 78 YKCIAKNSLGEVE 90
A N+
Sbjct: 71 VSFQAANAKSAAN 83
>d1fnla1 b.1.1.4 (A:3-86) Fc gamma receptor ectodomain (CD32)
{Human (Homo sapiens), III [TaxId: 9606]}
Length = 84
Score = 27.2 bits (59), Expect = 0.13
Identities = 15/86 (17%), Positives = 22/86 (25%), Gaps = 15/86 (17%)
Query: 2 PVIHVPNQLVGAPIDTDVTLECYVEAYPKSINYWVRDQGDMVISSERYEVESISRSIFDF 61
V+ + Q VTL+C P+ + + I
Sbjct: 6 AVVFLEPQWYSVLEKDSVTLKCQGAYSPEDNSTQWFHNESL---------------ISSQ 50
Query: 62 KMRLTIKKITKYDLGSYKCIAKNSLG 87
I T D G Y+C S
Sbjct: 51 ASSYFIDAATVNDSGEYRCQTNLSTL 76
>d1f2qa1 b.1.1.4 (A:4-85) IgE high affinity receptor alpha subunit
{Human (Homo sapiens) [TaxId: 9606]}
Length = 82
Score = 26.9 bits (58), Expect = 0.21
Identities = 13/86 (15%), Positives = 22/86 (25%), Gaps = 15/86 (17%)
Query: 2 PVIHVPNQLVGAPIDTDVTLECYVEAYPKSINYWVRDQGDMVISSERYEVESISRSIFDF 61
P + + +VTL C + + + G + +
Sbjct: 2 PKVSLNPPWNRIFKGENVTLTCNGNNFFEVSSTKWFHNGSL---------------SEET 46
Query: 62 KMRLTIKKITKYDLGSYKCIAKNSLG 87
L I D G YKC +
Sbjct: 47 NSSLNIVNAKFEDSGEYKCQHQQVNE 72
>d1dr9a1 b.1.1.1 (A:1-105) CD80, N-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 105
Score = 26.8 bits (58), Expect = 0.23
Identities = 11/94 (11%), Positives = 26/94 (27%), Gaps = 9/94 (9%)
Query: 11 VGAPIDTDVTLECYVE-AYPKSINYWVRDQGDMVISSERYEVESISRSIFDFKMR----- 64
V + TL C + + + Q + + + + +
Sbjct: 4 VTKEVKEVATLSCGHNVSVEELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFDITN 63
Query: 65 ---LTIKKITKYDLGSYKCIAKNSLGEVESSIRL 95
+ I + D G+Y+C+ + L
Sbjct: 64 NLSIVILALRPSDEGTYECVVLKYEKDAFKREHL 97
>d2nxyb2 b.1.1.3 (B:1098-1181) CD4 C2-set domains {Human (Homo
sapiens) [TaxId: 9606]}
Length = 84
Score = 26.6 bits (57), Expect = 0.25
Identities = 8/78 (10%), Positives = 17/78 (21%), Gaps = 16/78 (20%)
Query: 18 DVTLECYVEAYPKSINYWVRDQGDMVISSERYEVESISRSIFDFKMRLTIKKITKYDLGS 77
+TL +G + + V +
Sbjct: 16 SLTLTLESPPGSSPSVQCRSPRGKNIQGGKTLSVSQLELQDSGT---------------- 59
Query: 78 YKCIAKNSLGEVESSIRL 95
+ C + +VE I +
Sbjct: 60 WTCTVLQNQKKVEFKIDI 77
>d1l6za1 b.1.1.1 (A:1-107) Biliary glycoprotein C (CD66a,
CEACAM1A[1,4]), N-terminal domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 107
Score = 27.0 bits (59), Expect = 0.25
Identities = 11/89 (12%), Positives = 28/89 (31%), Gaps = 11/89 (12%)
Query: 18 DVTLECY-VEAYPKSINYWVRDQGDMVISSERYEVESISRSI---------FDFKMRLTI 67
+V L + + + ++ + + R+ S L
Sbjct: 16 NVLLLVHNLPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYSNGSLLF 75
Query: 68 KKITKYDLGSYKC-IAKNSLGEVESSIRL 95
+ IT D+G Y + + ++++R
Sbjct: 76 QMITMKDMGVYTLDMTDENYRRTQATVRF 104
>d2fcba1 b.1.1.4 (A:6-90) Fc gamma receptor ectodomain (CD32)
{Human (Homo sapiens), IIb [TaxId: 9606]}
Length = 85
Score = 25.7 bits (55), Expect = 0.50
Identities = 14/86 (16%), Positives = 26/86 (30%), Gaps = 15/86 (17%)
Query: 2 PVIHVPNQLVGAPIDTDVTLECYVEAYPKSINYWVRDQGDMVISSERYEVESISRSIFDF 61
V+ + Q + + VTL C P+S + G+++ + +
Sbjct: 5 AVLKLEPQWINVLQEDSVTLTCRGTHSPESDSIQWFHNGNLIPTHTQPS----------- 53
Query: 62 KMRLTIKKITKYDLGSYKCIAKNSLG 87
K D G Y C +
Sbjct: 54 ----YRFKANNNDSGEYTCQTGQTSL 75
>d1neua_ b.1.1.1 (A:) Myelin membrane adhesion molecule P0 {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 119
Score = 26.0 bits (56), Expect = 0.64
Identities = 16/115 (13%), Positives = 31/115 (26%), Gaps = 23/115 (20%)
Query: 3 VIHVPNQLVGAPIDTDVTLECYVEA-------------------YPKSINYWVRDQGDMV 43
V++ ++ GA + VTL C + + +
Sbjct: 2 VVYTDREVYGAV-GSQVTLHCSFWSSEWVSDDISFTWRYQPEGGRDAISIFHYAKGQPYI 60
Query: 44 ISSERYEVE-SISRSIFDFKMRLTIKKITKYDLGSYKCIAKNSLGEV--ESSIRL 95
++ + I + D G++ C KN V S + L
Sbjct: 61 DEVGTFKERIQWVGDPSWKDGSIVIHNLDYSDNGTFTCDVKNPPDIVGKTSQVTL 115
>d1q0xl2 b.1.1.2 (L:108-212) Immunoglobulin light chain lambda
constant domain, CL-lambda {Human (Homo sapiens) [TaxId:
9606]}
Length = 102
Score = 25.8 bits (56), Expect = 0.68
Identities = 14/78 (17%), Positives = 24/78 (30%), Gaps = 2/78 (2%)
Query: 19 VTLECYVEA-YPKSIN-YWVRDQGDMVISSERYEVESISRSIFDFKMRLTIKKITKYDLG 76
TL C + YP + W D + E + S + + LT+
Sbjct: 23 ATLVCTITDFYPGVVTVDWKVDGTPVTAGMETTQPSKQSNNKYMASSYLTLTARAWERHS 82
Query: 77 SYKCIAKNSLGEVESSIR 94
SY C + ++
Sbjct: 83 SYSCQVTHEGHSSNKTLS 100
>d1nfde2 b.1.1.2 (E:108-215) Immunoglobulin light chain lambda
constant domain, CL-lambda {Hamster (Cricetulus
griseus) [TaxId: 10029]}
Length = 104
Score = 24.6 bits (53), Expect = 1.6
Identities = 14/77 (18%), Positives = 22/77 (28%), Gaps = 1/77 (1%)
Query: 19 VTLECYVEA-YPKSINYWVRDQGDMVISSERYEVESISRSIFDFKMRLTIKKITKYDLGS 77
TL C V YP S + G + + S + L++
Sbjct: 23 ATLVCLVNDFYPGSATVTWKANGATINDGVKTTKPSKQGQNYMTSSYLSLTADQWKSHNR 82
Query: 78 YKCIAKNSLGEVESSIR 94
C + VE S+
Sbjct: 83 VSCQVTHEGETVEKSLS 99
>d1ncna_ b.1.1.1 (A:) CD86 (b7-2), N-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 110
Score = 24.0 bits (51), Expect = 2.7
Identities = 12/83 (14%), Positives = 20/83 (24%), Gaps = 13/83 (15%)
Query: 11 VGAPIDTDVTLECYVEAYPKSINYWVRDQGDMVISSERYEV----ESISRSIFDFKMR-- 64
+ A + L C + + EV E + R
Sbjct: 4 IQAYFNETADLPCQFANSQNQSLSELVVFWQDQENLVLNEVYLGKEKFDSVHSKYMGRTS 63
Query: 65 -------LTIKKITKYDLGSYKC 80
L + + D G Y+C
Sbjct: 64 FDSDSWTLRLHNLQIKDKGLYQC 86
>d1fltx_ b.1.1.4 (X:) Second domain of the Flt-1 receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 95
Score = 23.6 bits (51), Expect = 3.6
Identities = 9/38 (23%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Query: 58 IFDFKMRLTIKKITKYDLGSYKCIAKNSLGEVESSIRL 95
I+D + I T ++G C A + G + + L
Sbjct: 54 IWDSRKGFIISNATYKEIGLLTCEATVN-GHLYKTNYL 90
>d1m7ja3 c.1.9.11 (A:62-419) N-acyl-D-aminoacid amidohydrolase,
catalytic domain {Alcaligenes faecalis [TaxId: 511]}
Length = 358
Score = 23.2 bits (49), Expect = 6.7
Identities = 4/16 (25%), Positives = 9/16 (56%)
Query: 27 AYPKSINYWVRDQGDM 42
+P+ + ++ RD G
Sbjct: 320 TFPRVLGHYSRDLGLF 335
>d1q44a_ c.37.1.5 (A:) Putative steroid sulfotransferase rarO47
{Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 320
Score = 23.2 bits (49), Expect = 7.1
Identities = 6/35 (17%), Positives = 13/35 (37%)
Query: 28 YPKSINYWVRDQGDMVISSERYEVESISRSIFDFK 62
PKS W++ +++ ++ V S
Sbjct: 68 NPKSGTTWLKALVFALLNRHKFPVSSSGNHPLLVT 102
>gi|134310692|gb|EBA55606.1|(1-172:250) hypothetical protein
GOS_8779 [marine metagenome] E=1e-09 s/c=0.40 id=31%
cov=30%
Length = 159
Score = 22.9 bits (49), Expect = 7.3
Identities = 8/39 (20%), Positives = 13/39 (33%), Gaps = 1/39 (2%)
Query: 6 VPNQLVGAPIDTDVTLEC-YVEAYPKSINYWVRDQGDMV 43
+ P+ + YV+ Y K N W R +
Sbjct: 95 NRTDYLTVPLLAGEDIAAHYVKGYNKIWNRWYRVPNNTD 133
>d1cd9b1 b.1.2.1 (B:1-107) Granulocyte colony-stimulating factor
(GC-SF) receptor {Mouse (Mus musculus) [TaxId: 10090]}
Length = 107
Score = 22.6 bits (47), Expect = 9.1
Identities = 13/96 (13%), Positives = 22/96 (22%), Gaps = 15/96 (15%)
Query: 12 GAPIDTDVTLECYVEAYPKSINYWV---RDQGDMVISSERYEVESISRSIFDF------- 61
G P + L C + S+ + +
Sbjct: 2 GYPPASPSNLSCLMHLTTNSLVCQWEPGPETHLPTSFILKSFRSRADCQYQGDTIPDCVA 61
Query: 62 -----KMRLTIKKITKYDLGSYKCIAKNSLGEVESS 92
+ K + Y + A+N LG ES
Sbjct: 62 KKRQNNCSIPRKNLLLYQYMAIWVQAENMLGSSESP 97
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.319 0.136 0.398
Gapped
Lambda K H
0.267 0.0491 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 346,314
Number of extensions: 14254
Number of successful extensions: 139
Number of sequences better than 10.0: 1
Number of HSP's gapped: 109
Number of HSP's successfully gapped: 84
Length of query: 96
Length of database: 2,407,596
Length adjustment: 59
Effective length of query: 37
Effective length of database: 1,597,526
Effective search space: 59108462
Effective search space used: 59108462
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 47 (22.5 bits)