Query psy4615
Match_columns 477
No_of_seqs 335 out of 2256
Neff 5.0
Searched_HMMs 29240
Date Fri Aug 16 21:25:46 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4615.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/4615hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4b4u_A Bifunctional protein fo 100.0 4.7E-67 1.6E-71 524.9 22.2 220 66-289 18-302 (303)
2 1b0a_A Protein (fold bifunctio 100.0 1.2E-62 4.2E-67 490.7 21.9 216 69-288 1-282 (288)
3 4a5o_A Bifunctional protein fo 100.0 1.3E-61 4.4E-66 483.0 21.3 216 69-288 3-284 (286)
4 1a4i_A Methylenetetrahydrofola 100.0 4.2E-61 1.4E-65 482.2 20.7 215 71-289 4-295 (301)
5 2c2x_A Methylenetetrahydrofola 100.0 1.4E-60 4.7E-65 474.6 22.1 212 71-287 3-280 (281)
6 3p2o_A Bifunctional protein fo 100.0 9.4E-61 3.2E-65 476.7 20.4 214 69-287 2-282 (285)
7 4a26_A Putative C-1-tetrahydro 100.0 2.5E-60 8.6E-65 476.6 23.3 216 70-289 5-297 (300)
8 3l07_A Bifunctional protein fo 100.0 1.5E-60 5.2E-65 475.2 20.7 214 71-288 4-283 (285)
9 3ngx_A Bifunctional protein fo 100.0 8E-60 2.7E-64 468.0 20.6 207 72-289 2-273 (276)
10 1vko_A Inositol-3-phosphate sy 100.0 5.8E-60 2E-64 496.7 9.2 260 173-448 262-528 (537)
11 1p1j_A Inositol-3-phosphate sy 100.0 6.9E-60 2.4E-64 495.8 8.8 261 173-447 258-532 (533)
12 1edz_A 5,10-methylenetetrahydr 100.0 4.2E-52 1.4E-56 420.9 20.9 212 70-288 4-314 (320)
13 3qvs_A MIPS, MYO-inositol-1-ph 100.0 8.7E-47 3E-51 388.0 6.5 221 174-432 162-391 (392)
14 1vjp_A MYO-inositol-1-phosphat 100.0 5.8E-43 2E-47 358.4 6.3 240 160-432 135-390 (394)
15 3cin_A MYO-inositol-1-phosphat 100.0 1.2E-41 4E-46 352.2 8.0 232 169-438 148-392 (394)
16 1gr0_A Inositol-3-phosphate sy 100.0 7.6E-39 2.6E-43 326.8 5.5 203 193-430 152-366 (367)
17 1nvt_A Shikimate 5'-dehydrogen 98.5 3.3E-08 1.1E-12 97.1 3.6 126 109-255 17-153 (287)
18 1nyt_A Shikimate 5-dehydrogena 98.5 2.7E-08 9.1E-13 97.1 0.8 132 112-255 9-145 (271)
19 2d5c_A AROE, shikimate 5-dehyd 98.4 7.5E-08 2.6E-12 93.0 1.2 130 109-253 7-140 (263)
20 2hk9_A Shikimate dehydrogenase 98.2 3.7E-07 1.2E-11 89.2 1.4 134 107-253 16-153 (275)
21 1p77_A Shikimate 5-dehydrogena 98.1 6.4E-07 2.2E-11 87.5 1.0 122 122-255 20-145 (272)
22 2egg_A AROE, shikimate 5-dehyd 98.0 2.7E-06 9.3E-11 84.4 3.5 132 109-253 29-165 (297)
23 3fbt_A Chorismate mutase and s 96.6 0.00091 3.1E-08 66.3 3.5 130 112-253 13-146 (282)
24 3tnl_A Shikimate dehydrogenase 94.8 0.0099 3.4E-07 59.8 2.2 132 109-253 43-178 (315)
25 4b4u_A Bifunctional protein fo 90.2 0.1 3.5E-06 52.4 2.0 18 1-18 240-257 (303)
26 3dbi_A Sugar-binding transcrip 84.6 2.1 7.1E-05 41.2 7.5 63 100-167 60-126 (338)
27 3don_A Shikimate dehydrogenase 83.1 1.3 4.3E-05 43.6 5.2 114 123-253 20-141 (277)
28 3o8q_A Shikimate 5-dehydrogena 81.3 2.3 8E-05 41.6 6.4 113 123-253 28-150 (281)
29 4a5o_A Bifunctional protein fo 78.1 0.87 3E-05 45.3 2.2 17 1-17 222-238 (286)
30 3p2o_A Bifunctional protein fo 77.2 0.8 2.8E-05 45.6 1.6 17 1-17 221-237 (285)
31 3aoe_E Glutamate dehydrogenase 76.5 4.5 0.00015 42.2 7.1 64 206-271 192-262 (419)
32 3pwz_A Shikimate dehydrogenase 75.2 2.4 8.4E-05 41.3 4.4 113 123-253 22-144 (272)
33 3aog_A Glutamate dehydrogenase 74.7 5.2 0.00018 42.0 7.0 64 206-271 209-279 (440)
34 3h5o_A Transcriptional regulat 74.0 7.9 0.00027 37.1 7.7 63 101-168 62-126 (339)
35 4a26_A Putative C-1-tetrahydro 73.6 0.98 3.4E-05 45.3 1.2 18 1-18 228-245 (300)
36 1bgv_A Glutamate dehydrogenase 73.5 4.4 0.00015 42.7 6.1 65 206-272 204-276 (449)
37 3jyo_A Quinate/shikimate dehyd 73.4 9.5 0.00032 37.2 8.2 113 123-253 24-151 (283)
38 2hsg_A Glucose-resistance amyl 73.3 6.4 0.00022 37.6 6.9 63 100-167 59-123 (332)
39 1a4i_A Methylenetetrahydrofola 73.0 1.2 4.2E-05 44.6 1.7 17 1-17 226-242 (301)
40 1v9l_A Glutamate dehydrogenase 72.1 2.8 9.4E-05 43.8 4.2 65 206-272 184-255 (421)
41 1b0a_A Protein (fold bifunctio 71.6 1.3 4.3E-05 44.3 1.4 17 1-17 220-236 (288)
42 2tmg_A Protein (glutamate dehy 71.4 7 0.00024 40.7 7.0 64 206-271 183-254 (415)
43 2bma_A Glutamate dehydrogenase 71.2 4.7 0.00016 42.7 5.7 65 207-273 227-298 (470)
44 4fcc_A Glutamate dehydrogenase 70.6 7.1 0.00024 41.1 6.9 66 206-273 209-281 (450)
45 3l07_A Bifunctional protein fo 70.1 1.3 4.4E-05 44.1 1.1 17 1-17 222-238 (285)
46 3ngx_A Bifunctional protein fo 69.5 1.3 4.6E-05 43.8 1.1 15 1-15 211-225 (276)
47 3jvd_A Transcriptional regulat 68.9 13 0.00046 35.6 8.1 64 100-169 63-128 (333)
48 2yfq_A Padgh, NAD-GDH, NAD-spe 68.3 6.1 0.00021 41.2 5.7 64 206-271 186-261 (421)
49 1jye_A Lactose operon represso 67.2 11 0.00037 36.5 7.0 66 101-170 61-128 (349)
50 3t4e_A Quinate/shikimate dehyd 66.8 6.6 0.00023 39.1 5.5 113 123-253 51-172 (312)
51 2o20_A Catabolite control prot 66.0 8.3 0.00029 36.9 5.9 64 100-168 62-127 (332)
52 3gd5_A Otcase, ornithine carba 65.1 47 0.0016 33.4 11.3 168 64-255 7-184 (323)
53 3r3j_A Glutamate dehydrogenase 65.0 8.8 0.0003 40.5 6.2 62 208-271 215-283 (456)
54 2c2x_A Methylenetetrahydrofola 63.8 1.8 6.2E-05 43.0 0.7 17 1-17 221-237 (281)
55 3k92_A NAD-GDH, NAD-specific g 61.4 5.6 0.00019 41.6 3.9 64 206-271 195-265 (424)
56 1lu9_A Methylene tetrahydromet 60.9 7.4 0.00025 37.3 4.4 45 211-255 101-146 (287)
57 3e8x_A Putative NAD-dependent 60.7 3.9 0.00013 37.3 2.3 31 225-255 18-48 (236)
58 1jx6_A LUXP protein; protein-l 60.2 38 0.0013 32.1 9.3 83 79-166 14-110 (342)
59 3mw9_A GDH 1, glutamate dehydr 60.0 15 0.00053 39.1 7.0 63 207-271 211-288 (501)
60 3bil_A Probable LACI-family tr 58.7 10 0.00034 36.8 5.0 63 101-168 66-130 (348)
61 3jy6_A Transcriptional regulat 58.6 65 0.0022 29.4 10.4 66 100-170 6-73 (276)
62 3e3m_A Transcriptional regulat 56.8 15 0.00051 35.5 5.9 62 101-167 70-133 (355)
63 3h9u_A Adenosylhomocysteinase; 56.6 4.4 0.00015 42.6 2.1 48 207-255 190-237 (436)
64 1qpz_A PURA, protein (purine n 56.0 28 0.00094 33.3 7.6 63 100-167 57-121 (340)
65 1c1d_A L-phenylalanine dehydro 55.5 8.4 0.00029 39.2 4.0 49 206-255 148-201 (355)
66 4h15_A Short chain alcohol deh 55.3 5.3 0.00018 38.4 2.3 31 225-255 8-38 (261)
67 3ctp_A Periplasmic binding pro 54.9 16 0.00054 34.9 5.6 61 100-165 59-121 (330)
68 4g81_D Putative hexonate dehyd 53.5 5.6 0.00019 38.3 2.1 32 224-255 5-36 (255)
69 4ep1_A Otcase, ornithine carba 52.2 1.4E+02 0.0048 30.2 12.3 158 73-255 38-206 (340)
70 3h75_A Periplasmic sugar-bindi 52.2 30 0.001 33.1 7.1 63 101-167 3-69 (350)
71 3tum_A Shikimate dehydrogenase 52.1 18 0.00062 35.1 5.5 114 123-253 26-149 (269)
72 3kjx_A Transcriptional regulat 51.4 34 0.0012 32.7 7.4 61 102-167 69-131 (344)
73 1leh_A Leucine dehydrogenase; 51.3 14 0.00049 37.5 4.9 46 209-255 148-199 (364)
74 3e61_A Putative transcriptiona 50.9 37 0.0013 30.9 7.3 63 100-167 7-71 (277)
75 1pg5_A Aspartate carbamoyltran 50.1 1.4E+02 0.0048 29.5 11.7 131 103-255 40-179 (299)
76 3k9c_A Transcriptional regulat 49.6 63 0.0022 29.8 8.8 64 100-168 11-74 (289)
77 1o5i_A 3-oxoacyl-(acyl carrier 49.4 9.7 0.00033 35.4 3.0 33 223-255 14-46 (249)
78 3tpf_A Otcase, ornithine carba 49.3 1.3E+02 0.0043 30.0 11.3 128 103-255 38-173 (307)
79 4b79_A PA4098, probable short- 49.2 8.1 0.00028 37.1 2.5 30 226-255 9-38 (242)
80 3ctm_A Carbonyl reductase; alc 49.2 5.2 0.00018 37.5 1.1 48 203-255 14-61 (279)
81 4gkb_A 3-oxoacyl-[acyl-carrier 48.7 11 0.00036 36.3 3.2 33 223-255 2-34 (258)
82 1gtm_A Glutamate dehydrogenase 48.7 15 0.00051 38.1 4.6 49 206-255 185-239 (419)
83 3pxx_A Carveol dehydrogenase; 48.0 9.1 0.00031 35.9 2.6 31 225-255 7-37 (287)
84 1cyd_A Carbonyl reductase; sho 47.2 11 0.00038 34.2 3.0 32 224-255 3-34 (244)
85 4hp8_A 2-deoxy-D-gluconate 3-d 47.1 8 0.00027 37.3 2.1 32 224-255 5-36 (247)
86 3sx2_A Putative 3-ketoacyl-(ac 47.0 11 0.00037 35.4 3.0 32 224-255 9-40 (278)
87 3h5t_A Transcriptional regulat 46.6 22 0.00074 34.4 5.2 71 372-450 283-354 (366)
88 3g85_A Transcriptional regulat 46.3 44 0.0015 30.6 7.1 65 100-168 10-76 (289)
89 2i6u_A Otcase, ornithine carba 45.7 2.4E+02 0.0081 28.0 13.1 139 103-271 41-186 (307)
90 4eso_A Putative oxidoreductase 45.6 12 0.0004 35.0 3.0 31 225-255 5-35 (255)
91 3rwb_A TPLDH, pyridoxal 4-dehy 44.9 12 0.00042 34.6 3.0 31 225-255 3-33 (247)
92 2pnf_A 3-oxoacyl-[acyl-carrier 44.7 11 0.00038 34.2 2.6 32 224-255 3-34 (248)
93 3vtz_A Glucose 1-dehydrogenase 44.6 11 0.00036 35.7 2.5 33 223-255 9-41 (269)
94 3d3w_A L-xylulose reductase; u 44.5 13 0.00044 33.8 3.0 31 225-255 4-34 (244)
95 2wsb_A Galactitol dehydrogenas 44.5 13 0.00043 34.0 3.0 32 224-255 7-38 (254)
96 4fn4_A Short chain dehydrogena 44.5 11 0.00038 36.2 2.7 31 225-255 4-34 (254)
97 3l6u_A ABC-type sugar transpor 44.5 44 0.0015 30.7 6.7 67 100-171 7-75 (293)
98 3gem_A Short chain dehydrogena 44.1 9.3 0.00032 36.0 2.0 32 224-255 23-54 (260)
99 3e03_A Short chain dehydrogena 43.8 13 0.00046 34.9 3.1 32 224-255 2-33 (274)
100 3qiv_A Short-chain dehydrogena 43.7 13 0.00045 34.1 3.0 32 224-255 5-36 (253)
101 2ef0_A Ornithine carbamoyltran 43.7 1.9E+02 0.0067 28.5 11.6 130 103-255 47-181 (301)
102 1sby_A Alcohol dehydrogenase; 43.7 13 0.00045 34.2 3.0 30 225-254 2-31 (254)
103 2q2v_A Beta-D-hydroxybutyrate 43.6 11 0.00039 34.8 2.6 31 225-255 1-31 (255)
104 2ae2_A Protein (tropinone redu 43.6 13 0.00046 34.4 3.0 31 225-255 6-36 (260)
105 4e6p_A Probable sorbitol dehyd 43.5 13 0.00045 34.5 3.0 31 225-255 5-35 (259)
106 3ai3_A NADPH-sorbose reductase 43.3 15 0.00051 34.1 3.3 32 224-255 3-34 (263)
107 3oig_A Enoyl-[acyl-carrier-pro 43.3 16 0.00053 33.9 3.4 32 224-255 3-36 (266)
108 3uf0_A Short-chain dehydrogena 43.0 13 0.00046 35.1 3.0 32 224-255 27-58 (273)
109 2fwm_X 2,3-dihydro-2,3-dihydro 42.9 14 0.00048 34.2 3.0 31 225-255 4-34 (250)
110 3k4h_A Putative transcriptiona 42.7 34 0.0012 31.4 5.7 63 100-167 7-76 (292)
111 3ak4_A NADH-dependent quinucli 42.6 14 0.00048 34.3 3.0 31 225-255 9-39 (263)
112 3ijr_A Oxidoreductase, short c 42.5 14 0.00047 35.3 3.0 32 224-255 43-74 (291)
113 1hdc_A 3-alpha, 20 beta-hydrox 42.5 14 0.00048 34.3 3.0 31 225-255 2-32 (254)
114 3v2g_A 3-oxoacyl-[acyl-carrier 42.5 14 0.00049 34.9 3.1 33 223-255 26-58 (271)
115 4fs3_A Enoyl-[acyl-carrier-pro 42.5 15 0.0005 34.6 3.1 31 225-255 3-35 (256)
116 3op4_A 3-oxoacyl-[acyl-carrier 42.4 12 0.00042 34.7 2.6 31 225-255 6-36 (248)
117 3s55_A Putative short-chain de 42.4 14 0.00048 34.7 3.0 31 225-255 7-37 (281)
118 3rd5_A Mypaa.01249.C; ssgcid, 42.3 14 0.00048 35.0 3.0 31 225-255 13-43 (291)
119 3ond_A Adenosylhomocysteinase; 42.3 12 0.00041 39.8 2.7 41 214-255 251-291 (488)
120 3tpc_A Short chain alcohol deh 42.3 14 0.00049 34.2 3.0 31 225-255 4-34 (257)
121 3edm_A Short chain dehydrogena 42.2 14 0.00048 34.5 3.0 31 225-255 5-35 (259)
122 3ksu_A 3-oxoacyl-acyl carrier 42.2 14 0.00049 34.6 3.0 32 224-255 7-38 (262)
123 3r1i_A Short-chain type dehydr 42.1 14 0.00049 35.0 3.0 32 224-255 28-59 (276)
124 4fgs_A Probable dehydrogenase 42.0 12 0.00042 36.3 2.6 31 225-255 26-56 (273)
125 3uve_A Carveol dehydrogenase ( 41.9 14 0.00049 34.7 3.0 32 224-255 7-38 (286)
126 4iin_A 3-ketoacyl-acyl carrier 41.8 13 0.00044 34.9 2.6 33 223-255 24-56 (271)
127 3tzq_B Short-chain type dehydr 41.7 15 0.0005 34.6 3.0 32 224-255 7-38 (271)
128 3pk0_A Short-chain dehydrogena 41.7 12 0.00041 35.0 2.4 31 225-255 7-37 (262)
129 4f2g_A Otcase 1, ornithine car 41.6 2.1E+02 0.0072 28.4 11.5 128 103-255 47-181 (309)
130 2d1y_A Hypothetical protein TT 41.5 15 0.00051 34.1 3.0 31 225-255 3-33 (256)
131 3pgx_A Carveol dehydrogenase; 41.5 15 0.00051 34.6 3.0 31 225-255 12-42 (280)
132 2ew8_A (S)-1-phenylethanol deh 41.5 15 0.00051 34.0 3.0 31 225-255 4-34 (249)
133 3i1j_A Oxidoreductase, short c 41.5 13 0.00044 33.9 2.5 31 225-255 11-41 (247)
134 1zem_A Xylitol dehydrogenase; 41.4 15 0.00051 34.2 3.0 31 225-255 4-34 (262)
135 3svt_A Short-chain type dehydr 41.3 15 0.00051 34.6 3.0 32 224-255 7-38 (281)
136 2pd6_A Estradiol 17-beta-dehyd 41.3 15 0.00052 33.7 3.0 31 225-255 4-34 (264)
137 1nff_A Putative oxidoreductase 41.2 15 0.00051 34.3 3.0 31 225-255 4-34 (260)
138 2o23_A HADH2 protein; HSD17B10 41.0 15 0.00053 33.7 3.0 31 225-255 9-39 (265)
139 2pzm_A Putative nucleotide sug 41.0 14 0.00047 35.5 2.7 29 225-253 17-45 (330)
140 2jah_A Clavulanic acid dehydro 41.0 16 0.00053 33.8 3.0 31 225-255 4-34 (247)
141 2zat_A Dehydrogenase/reductase 41.0 13 0.00045 34.4 2.5 31 225-255 11-41 (260)
142 3awd_A GOX2181, putative polyo 40.9 16 0.00053 33.5 3.0 31 225-255 10-40 (260)
143 3hs3_A Ribose operon repressor 40.9 41 0.0014 30.9 5.9 65 99-168 8-75 (277)
144 1vl8_A Gluconate 5-dehydrogena 40.9 15 0.00052 34.5 3.0 33 223-255 16-48 (267)
145 1xkq_A Short-chain reductase f 40.8 11 0.00038 35.5 2.0 31 225-255 3-33 (280)
146 3h7a_A Short chain dehydrogena 40.6 15 0.00052 34.2 2.9 31 225-255 4-34 (252)
147 3ucx_A Short chain dehydrogena 40.6 18 0.00062 33.8 3.4 31 225-255 8-38 (264)
148 3n74_A 3-ketoacyl-(acyl-carrie 40.6 16 0.00054 33.8 3.0 32 224-255 5-36 (261)
149 3bbl_A Regulatory protein of L 40.5 37 0.0013 31.4 5.5 66 100-169 3-73 (287)
150 3grp_A 3-oxoacyl-(acyl carrier 40.5 13 0.00046 35.0 2.5 31 225-255 24-54 (266)
151 2bgk_A Rhizome secoisolaricire 40.4 16 0.00055 33.8 3.0 31 225-255 13-43 (278)
152 3uxy_A Short-chain dehydrogena 40.4 13 0.00045 35.1 2.4 31 225-255 25-55 (266)
153 2dtx_A Glucose 1-dehydrogenase 40.3 15 0.0005 34.6 2.7 31 225-255 5-35 (264)
154 3cxt_A Dehydrogenase with diff 40.3 14 0.00048 35.4 2.7 31 225-255 31-61 (291)
155 3tsc_A Putative oxidoreductase 40.2 16 0.00055 34.3 3.0 31 225-255 8-38 (277)
156 2ag5_A DHRS6, dehydrogenase/re 40.2 14 0.00048 34.0 2.5 31 225-255 3-33 (246)
157 2z1n_A Dehydrogenase; reductas 40.0 16 0.00055 33.9 3.0 31 225-255 4-34 (260)
158 4ibo_A Gluconate dehydrogenase 40.0 13 0.00045 35.2 2.4 32 224-255 22-53 (271)
159 4b8w_A GDP-L-fucose synthase; 39.9 18 0.00062 33.4 3.3 29 224-252 2-30 (319)
160 1pvv_A Otcase, ornithine carba 39.9 77 0.0026 31.6 8.1 139 103-271 48-192 (315)
161 3m9w_A D-xylose-binding peripl 39.9 48 0.0017 30.9 6.3 66 102-172 3-70 (313)
162 4dmm_A 3-oxoacyl-[acyl-carrier 39.9 13 0.00045 35.0 2.4 32 224-255 24-55 (269)
163 3lyl_A 3-oxoacyl-(acyl-carrier 39.9 14 0.00049 33.7 2.5 31 225-255 2-32 (247)
164 1hxh_A 3BETA/17BETA-hydroxyste 39.9 13 0.00045 34.4 2.3 31 225-255 3-33 (253)
165 3gvc_A Oxidoreductase, probabl 39.8 15 0.0005 35.0 2.7 31 225-255 26-56 (277)
166 3is3_A 17BETA-hydroxysteroid d 39.8 14 0.00048 34.7 2.5 31 225-255 15-45 (270)
167 3v2h_A D-beta-hydroxybutyrate 39.8 16 0.00055 34.6 3.0 31 225-255 22-52 (281)
168 3o74_A Fructose transport syst 39.7 99 0.0034 27.8 8.3 63 103-170 4-68 (272)
169 3ppi_A 3-hydroxyacyl-COA dehyd 39.6 13 0.00043 35.0 2.2 31 225-255 27-57 (281)
170 3lf2_A Short chain oxidoreduct 39.6 17 0.00057 34.0 3.0 32 224-255 4-35 (265)
171 3f1l_A Uncharacterized oxidore 39.6 17 0.00057 33.7 3.0 31 225-255 9-39 (252)
172 3gyb_A Transcriptional regulat 39.6 59 0.002 29.6 6.8 61 100-165 4-65 (280)
173 4dqx_A Probable oxidoreductase 39.5 16 0.00056 34.6 3.0 32 224-255 23-54 (277)
174 3f9i_A 3-oxoacyl-[acyl-carrier 39.4 14 0.00047 33.9 2.3 32 224-255 10-41 (249)
175 3ek2_A Enoyl-(acyl-carrier-pro 39.4 17 0.0006 33.4 3.1 32 224-255 10-43 (271)
176 3afn_B Carbonyl reductase; alp 39.4 12 0.00043 34.0 2.1 31 225-255 4-34 (258)
177 1yb1_A 17-beta-hydroxysteroid 39.4 17 0.00057 34.1 3.0 32 224-255 27-58 (272)
178 1fmc_A 7 alpha-hydroxysteroid 39.3 14 0.00047 33.7 2.3 32 224-255 7-38 (255)
179 4imr_A 3-oxoacyl-(acyl-carrier 39.3 14 0.00046 35.1 2.4 31 225-255 30-60 (275)
180 2uvd_A 3-oxoacyl-(acyl-carrier 39.3 14 0.00047 34.0 2.4 30 226-255 2-31 (246)
181 3p19_A BFPVVD8, putative blue 39.3 16 0.00055 34.4 2.9 32 224-255 12-43 (266)
182 3t7c_A Carveol dehydrogenase; 39.2 17 0.00057 34.8 3.0 32 224-255 24-55 (299)
183 3grf_A Ornithine carbamoyltran 39.2 1.7E+02 0.0059 29.3 10.5 130 103-255 46-189 (328)
184 1iy8_A Levodione reductase; ox 39.1 17 0.00058 33.9 3.0 31 225-255 10-40 (267)
185 2d5c_A AROE, shikimate 5-dehyd 39.1 25 0.00087 33.0 4.2 48 1-54 195-245 (263)
186 3d8u_A PURR transcriptional re 39.0 52 0.0018 29.8 6.3 63 101-168 3-67 (275)
187 1w6u_A 2,4-dienoyl-COA reducta 38.9 17 0.00058 34.2 3.0 31 225-255 23-53 (302)
188 2pd4_A Enoyl-[acyl-carrier-pro 38.9 20 0.00067 33.6 3.4 31 225-255 3-35 (275)
189 3ioy_A Short-chain dehydrogena 38.8 19 0.00066 34.9 3.4 31 225-255 5-35 (319)
190 3zv4_A CIS-2,3-dihydrobiphenyl 38.7 17 0.00059 34.4 3.0 31 225-255 2-32 (281)
191 2x7x_A Sensor protein; transfe 38.7 38 0.0013 32.1 5.4 63 100-167 5-69 (325)
192 1nyt_A Shikimate 5-dehydrogena 38.6 24 0.0008 33.7 3.9 47 2-54 204-254 (271)
193 3r3s_A Oxidoreductase; structu 38.5 17 0.00059 34.7 3.0 31 225-255 46-76 (294)
194 4a8t_A Putrescine carbamoyltra 38.4 3E+02 0.01 27.7 12.2 130 103-255 65-202 (339)
195 2fep_A Catabolite control prot 38.4 88 0.003 28.9 7.8 65 99-168 14-80 (289)
196 3tjr_A Short chain dehydrogena 38.4 17 0.0006 34.8 3.0 31 225-255 28-58 (301)
197 2hq1_A Glucose/ribitol dehydro 38.3 16 0.00054 33.2 2.5 31 225-255 2-32 (247)
198 3brq_A HTH-type transcriptiona 38.3 38 0.0013 30.9 5.3 64 100-168 18-85 (296)
199 3c3k_A Alanine racemase; struc 38.2 64 0.0022 29.7 6.8 63 100-167 7-71 (285)
200 3rkr_A Short chain oxidoreduct 38.2 15 0.00053 34.1 2.5 31 225-255 26-56 (262)
201 1uls_A Putative 3-oxoacyl-acyl 38.1 18 0.00062 33.3 3.0 31 225-255 2-32 (245)
202 3l49_A ABC sugar (ribose) tran 38.1 46 0.0016 30.5 5.7 62 101-167 5-68 (291)
203 3imf_A Short chain dehydrogena 37.9 15 0.0005 34.2 2.3 31 225-255 3-33 (257)
204 3gaf_A 7-alpha-hydroxysteroid 37.9 14 0.00049 34.4 2.2 32 224-255 8-39 (256)
205 4egf_A L-xylulose reductase; s 37.5 15 0.00051 34.4 2.3 31 225-255 17-47 (266)
206 2rhc_B Actinorhodin polyketide 37.5 18 0.00063 34.0 3.0 31 225-255 19-49 (277)
207 2z1m_A GDP-D-mannose dehydrata 37.4 15 0.00051 34.8 2.3 27 227-253 2-28 (345)
208 2qu7_A Putative transcriptiona 37.4 48 0.0016 30.4 5.8 65 100-169 7-72 (288)
209 1d7o_A Enoyl-[acyl-carrier pro 37.4 24 0.00082 33.4 3.8 32 224-255 4-37 (297)
210 1zk4_A R-specific alcohol dehy 37.3 15 0.00053 33.4 2.3 31 225-255 3-33 (251)
211 3o1i_D Periplasmic protein TOR 37.3 53 0.0018 30.2 6.1 68 100-172 4-75 (304)
212 2qq5_A DHRS1, dehydrogenase/re 37.3 16 0.00056 33.8 2.5 31 225-255 2-32 (260)
213 1ae1_A Tropinone reductase-I; 37.3 19 0.00065 33.8 3.0 32 224-255 17-48 (273)
214 1uzm_A 3-oxoacyl-[acyl-carrier 37.2 16 0.00054 33.8 2.4 32 224-255 11-42 (247)
215 2p91_A Enoyl-[acyl-carrier-pro 37.2 18 0.0006 34.2 2.8 30 226-255 19-50 (285)
216 1yxm_A Pecra, peroxisomal tran 37.1 19 0.00064 34.0 3.0 31 225-255 15-45 (303)
217 3t4x_A Oxidoreductase, short c 37.1 16 0.00053 34.3 2.4 32 224-255 6-37 (267)
218 4fc7_A Peroxisomal 2,4-dienoyl 37.0 19 0.00064 34.0 2.9 31 225-255 24-54 (277)
219 1yde_A Retinal dehydrogenase/r 36.9 19 0.00066 33.8 3.0 32 224-255 5-36 (270)
220 4id9_A Short-chain dehydrogena 36.9 15 0.0005 35.2 2.2 29 225-253 16-44 (347)
221 1gz6_A Estradiol 17 beta-dehyd 36.8 14 0.00047 36.1 2.0 32 224-255 5-36 (319)
222 1x1t_A D(-)-3-hydroxybutyrate 36.7 16 0.00054 33.9 2.4 30 226-255 2-31 (260)
223 3tl3_A Short-chain type dehydr 36.7 14 0.00049 34.2 2.0 32 224-255 5-36 (257)
224 2b4q_A Rhamnolipids biosynthes 36.5 20 0.00067 34.0 3.0 31 225-255 26-56 (276)
225 3huu_A Transcription regulator 36.4 46 0.0016 31.0 5.6 64 100-168 21-91 (305)
226 1xq1_A Putative tropinone redu 36.4 16 0.00056 33.7 2.3 32 224-255 10-41 (266)
227 3gdg_A Probable NADP-dependent 36.3 19 0.00065 33.3 2.8 31 225-255 17-49 (267)
228 3egc_A Putative ribose operon 36.3 60 0.0021 29.8 6.3 65 100-169 7-73 (291)
229 2a4k_A 3-oxoacyl-[acyl carrier 36.3 20 0.00069 33.6 3.0 31 225-255 3-33 (263)
230 3n58_A Adenosylhomocysteinase; 36.2 23 0.0008 37.4 3.7 45 210-255 229-273 (464)
231 2egg_A AROE, shikimate 5-dehyd 36.2 32 0.0011 33.4 4.5 47 1-54 229-279 (297)
232 2wyu_A Enoyl-[acyl carrier pro 36.2 21 0.0007 33.2 3.0 31 225-255 5-37 (261)
233 1ja9_A 4HNR, 1,3,6,8-tetrahydr 36.1 16 0.00056 33.6 2.3 31 225-255 18-48 (274)
234 1xg5_A ARPG836; short chain de 35.9 19 0.00064 33.7 2.7 31 225-255 29-59 (279)
235 3sc4_A Short chain dehydrogena 35.9 20 0.0007 33.9 3.0 31 225-255 6-36 (285)
236 3tox_A Short chain dehydrogena 35.9 17 0.0006 34.5 2.5 31 225-255 5-35 (280)
237 2gdz_A NAD+-dependent 15-hydro 35.9 20 0.00068 33.3 2.9 30 226-255 5-34 (267)
238 1qsg_A Enoyl-[acyl-carrier-pro 35.7 22 0.00074 33.1 3.1 30 226-255 7-38 (265)
239 3rih_A Short chain dehydrogena 35.6 17 0.00057 35.0 2.3 32 224-255 37-68 (293)
240 3ksm_A ABC-type sugar transpor 35.4 62 0.0021 29.2 6.1 64 102-168 1-67 (276)
241 1g0o_A Trihydroxynaphthalene r 35.3 17 0.00059 34.2 2.3 31 225-255 26-56 (283)
242 2nm0_A Probable 3-oxacyl-(acyl 35.3 20 0.00068 33.5 2.8 31 225-255 18-48 (253)
243 1h5q_A NADP-dependent mannitol 35.1 15 0.00053 33.6 2.0 31 225-255 11-41 (265)
244 2c07_A 3-oxoacyl-(acyl-carrier 35.0 21 0.0007 33.7 2.9 32 224-255 40-71 (285)
245 4dry_A 3-oxoacyl-[acyl-carrier 34.8 15 0.00051 34.9 1.9 32 224-255 29-60 (281)
246 1gee_A Glucose 1-dehydrogenase 34.8 16 0.00056 33.5 2.1 31 225-255 4-34 (261)
247 3ftp_A 3-oxoacyl-[acyl-carrier 34.7 18 0.00061 34.2 2.4 32 224-255 24-55 (270)
248 4da9_A Short-chain dehydrogena 34.6 22 0.00076 33.6 3.0 31 225-255 26-56 (280)
249 1xhl_A Short-chain dehydrogena 34.5 16 0.00054 35.0 2.0 31 225-255 23-53 (297)
250 3sxp_A ADP-L-glycero-D-mannohe 34.5 19 0.00065 34.8 2.6 30 225-254 7-38 (362)
251 3sds_A Ornithine carbamoyltran 34.4 3.8E+02 0.013 27.1 13.1 130 103-255 68-215 (353)
252 1spx_A Short-chain reductase f 34.3 18 0.00062 33.7 2.3 31 225-255 3-33 (278)
253 3qlj_A Short chain dehydrogena 34.3 16 0.00055 35.3 2.0 31 225-255 24-54 (322)
254 3qk7_A Transcriptional regulat 34.2 1E+02 0.0035 28.5 7.6 65 100-169 5-74 (294)
255 1npy_A Hypothetical shikimate 34.1 53 0.0018 31.7 5.7 134 103-253 7-143 (271)
256 3nyw_A Putative oxidoreductase 34.1 20 0.00067 33.4 2.5 31 225-255 4-34 (250)
257 3icc_A Putative 3-oxoacyl-(acy 34.0 18 0.00062 33.0 2.3 30 226-255 5-34 (255)
258 1vlv_A Otcase, ornithine carba 33.9 3.7E+02 0.013 26.8 11.9 128 103-255 60-195 (325)
259 1dbq_A Purine repressor; trans 33.8 60 0.0021 29.6 5.8 64 100-168 6-71 (289)
260 1nvt_A Shikimate 5'-dehydrogen 33.7 41 0.0014 32.2 4.8 47 1-54 219-269 (287)
261 3oec_A Carveol dehydrogenase ( 33.6 20 0.00068 34.7 2.5 31 225-255 43-73 (317)
262 3orf_A Dihydropteridine reduct 33.5 21 0.00073 33.0 2.7 31 225-255 19-49 (251)
263 2dri_A D-ribose-binding protei 33.3 1.2E+02 0.0041 27.5 7.8 61 102-167 2-64 (271)
264 2p4h_X Vestitone reductase; NA 33.2 19 0.00066 33.8 2.3 28 228-255 1-28 (322)
265 2h7i_A Enoyl-[acyl-carrier-pro 33.1 25 0.00086 32.8 3.1 31 225-255 4-36 (269)
266 3lkv_A Uncharacterized conserv 33.1 1.6E+02 0.0054 27.9 8.9 60 101-166 140-199 (302)
267 3grk_A Enoyl-(acyl-carrier-pro 33.0 28 0.00095 33.2 3.5 31 225-255 28-60 (293)
268 3csu_A Protein (aspartate carb 33.0 3.7E+02 0.013 26.6 11.7 161 73-255 9-184 (310)
269 4iiu_A 3-oxoacyl-[acyl-carrier 33.0 19 0.00064 33.6 2.2 31 225-255 23-53 (267)
270 3uce_A Dehydrogenase; rossmann 32.7 16 0.00054 33.1 1.6 31 225-255 3-33 (223)
271 2o2s_A Enoyl-acyl carrier redu 32.6 28 0.00097 33.4 3.5 32 224-255 5-38 (315)
272 3vps_A TUNA, NAD-dependent epi 32.6 22 0.00077 33.1 2.7 28 226-253 5-32 (321)
273 1byk_A Protein (trehalose oper 32.6 1.3E+02 0.0045 26.8 7.9 62 102-168 3-66 (255)
274 1y1p_A ARII, aldehyde reductas 32.3 22 0.00074 33.6 2.5 30 226-255 9-38 (342)
275 2x9g_A PTR1, pteridine reducta 32.2 17 0.00058 34.4 1.7 31 225-255 20-50 (288)
276 2bka_A CC3, TAT-interacting pr 32.1 18 0.00062 32.6 1.9 28 226-253 16-43 (242)
277 1ooe_A Dihydropteridine reduct 32.0 18 0.0006 33.0 1.8 29 227-255 2-30 (236)
278 3r7f_A Aspartate carbamoyltran 31.9 3.9E+02 0.013 26.4 14.3 116 121-255 53-176 (304)
279 1xu9_A Corticosteroid 11-beta- 31.6 21 0.00071 33.6 2.3 30 226-255 26-55 (286)
280 1ml4_A Aspartate transcarbamoy 31.2 2.9E+02 0.01 27.3 10.6 128 103-255 46-184 (308)
281 3rot_A ABC sugar transporter, 31.2 67 0.0023 29.7 5.7 92 373-467 204-297 (297)
282 2hrz_A AGR_C_4963P, nucleoside 31.2 21 0.0007 34.1 2.2 30 223-252 9-38 (342)
283 3kke_A LACI family transcripti 31.2 1E+02 0.0036 28.6 7.1 64 101-169 15-80 (303)
284 3nrc_A Enoyl-[acyl-carrier-pro 31.2 28 0.00095 32.7 3.1 31 225-255 23-55 (280)
285 1mxh_A Pteridine reductase 2; 31.0 20 0.00069 33.4 2.0 31 225-255 8-38 (276)
286 1sny_A Sniffer CG10964-PA; alp 31.0 21 0.00072 32.9 2.1 28 225-252 18-45 (267)
287 3un1_A Probable oxidoreductase 30.9 23 0.0008 33.1 2.5 31 225-255 25-55 (260)
288 1hdo_A Biliverdin IX beta redu 30.8 26 0.00088 30.4 2.6 29 227-255 2-30 (206)
289 3kvo_A Hydroxysteroid dehydrog 30.8 26 0.0009 34.7 2.9 32 224-255 41-72 (346)
290 3hcw_A Maltose operon transcri 30.7 57 0.002 30.2 5.2 64 99-167 5-75 (295)
291 3l6e_A Oxidoreductase, short-c 30.7 26 0.00088 32.2 2.7 29 227-255 2-30 (235)
292 1u7z_A Coenzyme A biosynthesis 30.6 23 0.00079 33.7 2.4 31 225-255 5-51 (226)
293 3tfo_A Putative 3-oxoacyl-(acy 30.6 23 0.0008 33.4 2.4 30 226-255 2-31 (264)
294 3d6n_B Aspartate carbamoyltran 30.5 3.6E+02 0.012 26.5 11.0 119 119-255 49-175 (291)
295 3l77_A Short-chain alcohol deh 30.5 28 0.00095 31.5 2.9 29 227-255 1-29 (235)
296 3v8b_A Putative dehydrogenase, 30.4 27 0.00092 33.2 2.9 31 225-255 25-55 (283)
297 2q1w_A Putative nucleotide sug 30.4 22 0.00077 34.0 2.3 29 225-253 18-46 (333)
298 2ptg_A Enoyl-acyl carrier redu 30.0 33 0.0011 32.9 3.5 32 224-255 5-38 (319)
299 3osu_A 3-oxoacyl-[acyl-carrier 29.9 23 0.0008 32.5 2.2 30 226-255 2-31 (246)
300 1dhr_A Dihydropteridine reduct 29.9 28 0.00096 31.8 2.8 30 226-255 5-34 (241)
301 2amj_A Modulator of drug activ 29.7 1.1E+02 0.0038 27.7 6.8 72 102-183 13-93 (204)
302 1rkx_A CDP-glucose-4,6-dehydra 29.3 21 0.00073 34.3 1.9 28 226-253 7-34 (357)
303 3gv0_A Transcriptional regulat 28.9 55 0.0019 30.2 4.6 63 100-167 7-73 (288)
304 1e7w_A Pteridine reductase; di 28.8 24 0.00082 33.5 2.2 31 225-255 6-36 (291)
305 2iks_A DNA-binding transcripti 28.5 1.3E+02 0.0044 27.6 7.2 65 100-169 19-85 (293)
306 3o26_A Salutaridine reductase; 28.4 25 0.00086 32.8 2.2 31 225-255 9-39 (311)
307 1yo6_A Putative carbonyl reduc 28.4 28 0.00095 31.3 2.4 27 226-252 1-27 (250)
308 1zmo_A Halohydrin dehalogenase 28.2 32 0.0011 31.6 2.8 28 228-255 1-28 (244)
309 3clk_A Transcription regulator 28.0 90 0.0031 28.7 6.0 66 100-169 7-74 (290)
310 2ekp_A 2-deoxy-D-gluconate 3-d 27.9 31 0.001 31.5 2.7 28 228-255 2-29 (239)
311 3m1a_A Putative dehydrogenase; 27.9 26 0.00088 32.7 2.2 30 226-255 3-32 (281)
312 2rh8_A Anthocyanidin reductase 27.8 26 0.00089 33.3 2.2 27 227-253 8-34 (338)
313 4dyv_A Short-chain dehydrogena 27.8 24 0.00083 33.3 2.0 31 225-255 25-55 (272)
314 3k31_A Enoyl-(acyl-carrier-pro 27.8 39 0.0013 32.2 3.5 32 224-255 26-59 (296)
315 1xq6_A Unknown protein; struct 27.6 32 0.0011 30.8 2.7 30 226-255 2-33 (253)
316 1wma_A Carbonyl reductase [NAD 27.3 28 0.00097 31.6 2.3 30 226-255 2-32 (276)
317 2ydy_A Methionine adenosyltran 27.3 27 0.00094 32.8 2.3 27 228-254 2-28 (315)
318 3uug_A Multiple sugar-binding 27.3 79 0.0027 29.5 5.5 63 101-168 3-67 (330)
319 1uay_A Type II 3-hydroxyacyl-C 27.3 28 0.00094 31.3 2.2 29 227-255 1-29 (242)
320 2c29_D Dihydroflavonol 4-reduc 27.1 21 0.00072 34.0 1.4 29 227-255 4-32 (337)
321 3sju_A Keto reductase; short-c 27.1 30 0.001 32.6 2.5 30 226-255 22-51 (279)
322 3u5t_A 3-oxoacyl-[acyl-carrier 26.9 28 0.00095 32.8 2.3 30 226-255 25-54 (267)
323 4a8p_A Putrescine carbamoyltra 26.9 1.3E+02 0.0046 30.5 7.4 130 103-255 43-180 (355)
324 3oid_A Enoyl-[acyl-carrier-pro 26.8 30 0.001 32.3 2.4 29 227-255 3-31 (258)
325 3rft_A Uronate dehydrogenase; 26.7 19 0.00065 33.5 1.0 27 227-253 2-28 (267)
326 1edo_A Beta-keto acyl carrier 26.6 27 0.00093 31.5 2.0 28 228-255 1-28 (244)
327 3d4o_A Dipicolinate synthase s 26.4 57 0.002 31.2 4.4 41 214-255 141-181 (293)
328 1oaa_A Sepiapterin reductase; 26.4 25 0.00085 32.5 1.8 31 225-255 3-36 (259)
329 3dii_A Short-chain dehydrogena 26.2 34 0.0012 31.5 2.7 28 228-255 2-29 (247)
330 3ruf_A WBGU; rossmann fold, UD 26.2 31 0.001 33.0 2.4 43 208-255 10-52 (351)
331 3u9l_A 3-oxoacyl-[acyl-carrier 26.1 26 0.00088 34.2 1.9 30 226-255 3-32 (324)
332 2cfc_A 2-(R)-hydroxypropyl-COM 26.0 36 0.0012 30.8 2.8 29 227-255 1-29 (250)
333 1duv_G Octase-1, ornithine tra 26.0 1.4E+02 0.0047 30.1 7.2 115 121-255 61-183 (333)
334 3o38_A Short chain dehydrogena 26.0 39 0.0013 31.2 3.0 31 225-255 19-50 (266)
335 3enk_A UDP-glucose 4-epimerase 25.7 31 0.0011 32.7 2.4 28 227-254 4-31 (341)
336 2bd0_A Sepiapterin reductase; 25.7 25 0.00087 31.8 1.7 27 227-253 1-27 (244)
337 2vk2_A YTFQ, ABC transporter p 25.6 87 0.003 29.1 5.4 62 102-168 3-66 (306)
338 3i4f_A 3-oxoacyl-[acyl-carrier 25.5 30 0.001 31.8 2.2 31 225-255 4-34 (264)
339 3d7l_A LIN1944 protein; APC893 25.5 33 0.0011 30.1 2.3 27 228-255 2-29 (202)
340 2x6t_A ADP-L-glycero-D-manno-h 25.5 30 0.001 33.3 2.2 28 225-252 43-70 (357)
341 2rgy_A Transcriptional regulat 25.5 1.1E+02 0.0038 28.1 6.1 64 100-168 7-75 (290)
342 2fn9_A Ribose ABC transporter, 25.2 1.3E+02 0.0045 27.3 6.6 62 103-169 4-67 (290)
343 3lft_A Uncharacterized protein 25.1 1.8E+02 0.0063 26.8 7.6 63 101-167 2-69 (295)
344 3e9n_A Putative short-chain de 25.1 34 0.0011 31.3 2.4 28 225-253 2-29 (245)
345 2gn4_A FLAA1 protein, UDP-GLCN 24.9 33 0.0011 33.4 2.4 28 226-253 19-47 (344)
346 2ph3_A 3-oxoacyl-[acyl carrier 24.8 30 0.001 31.2 2.0 28 228-255 1-28 (245)
347 2a35_A Hypothetical protein PA 24.8 41 0.0014 29.5 2.8 27 227-253 4-30 (215)
348 2b69_A UDP-glucuronate decarbo 24.8 32 0.0011 32.8 2.3 28 226-253 25-52 (343)
349 2fqx_A Membrane lipoprotein TM 24.4 1.2E+02 0.0043 28.9 6.4 63 101-168 4-70 (318)
350 3oml_A GH14720P, peroxisomal m 24.4 30 0.001 37.1 2.1 32 224-255 15-46 (613)
351 1sb8_A WBPP; epimerase, 4-epim 24.4 27 0.00091 33.6 1.6 30 225-254 24-53 (352)
352 1ek6_A UDP-galactose 4-epimera 24.3 37 0.0013 32.2 2.6 28 228-255 2-29 (348)
353 1i24_A Sulfolipid biosynthesis 24.2 32 0.0011 33.5 2.2 34 222-255 5-38 (404)
354 3gk3_A Acetoacetyl-COA reducta 24.1 33 0.0011 32.0 2.1 30 226-255 23-52 (269)
355 2ehd_A Oxidoreductase, oxidore 24.1 36 0.0012 30.6 2.4 29 227-255 4-32 (234)
356 1geg_A Acetoin reductase; SDR 23.9 40 0.0014 31.1 2.7 28 228-255 2-29 (256)
357 2qhx_A Pteridine reductase 1; 23.9 33 0.0011 33.4 2.2 30 226-255 44-73 (328)
358 3tb6_A Arabinose metabolism tr 23.9 1.1E+02 0.0038 27.7 5.8 63 102-169 16-80 (298)
359 3rku_A Oxidoreductase YMR226C; 23.8 21 0.00073 34.1 0.8 28 226-253 31-58 (287)
360 2rjo_A Twin-arginine transloca 23.7 94 0.0032 29.3 5.3 63 100-167 4-70 (332)
361 3a28_C L-2.3-butanediol dehydr 23.5 35 0.0012 31.5 2.2 29 227-255 1-29 (258)
362 3miz_A Putative transcriptiona 23.3 89 0.003 28.9 5.0 64 100-168 12-78 (301)
363 3ezl_A Acetoacetyl-COA reducta 23.2 24 0.00082 32.4 1.0 31 225-255 10-40 (256)
364 1jtv_A 17 beta-hydroxysteroid 23.0 33 0.0011 33.4 2.0 29 227-255 1-29 (327)
365 3ew7_A LMO0794 protein; Q8Y8U8 22.7 37 0.0013 29.8 2.1 27 229-255 1-27 (221)
366 4b4o_A Epimerase family protei 21.9 38 0.0013 31.7 2.1 24 230-253 2-25 (298)
367 3oj0_A Glutr, glutamyl-tRNA re 21.8 55 0.0019 27.5 2.9 39 210-253 7-45 (144)
368 2nwq_A Probable short-chain de 21.7 46 0.0016 31.4 2.7 30 225-255 19-48 (272)
369 3gbv_A Putative LACI-family tr 21.6 1.8E+02 0.0061 26.5 6.6 66 100-169 7-78 (304)
370 2gas_A Isoflavone reductase; N 21.6 50 0.0017 30.7 2.9 27 228-254 2-28 (307)
371 2dkn_A 3-alpha-hydroxysteroid 21.3 42 0.0014 30.2 2.2 27 229-255 2-28 (255)
372 4e3z_A Putative oxidoreductase 21.3 40 0.0014 31.3 2.1 29 227-255 25-53 (272)
373 2hk9_A Shikimate dehydrogenase 21.2 53 0.0018 31.2 3.0 47 1-54 210-258 (275)
374 2h0a_A TTHA0807, transcription 21.1 1.6E+02 0.0055 26.5 6.2 55 111-169 10-64 (276)
375 3gpi_A NAD-dependent epimerase 21.1 45 0.0015 30.9 2.4 26 227-253 2-27 (286)
376 3guy_A Short-chain dehydrogena 21.0 43 0.0015 30.2 2.2 27 229-255 2-28 (230)
377 3gvp_A Adenosylhomocysteinase 20.9 80 0.0027 33.1 4.4 44 211-255 202-246 (435)
378 3iwt_A 178AA long hypothetical 20.8 1.6E+02 0.0053 26.1 5.9 68 99-170 13-91 (178)
379 2ioy_A Periplasmic sugar-bindi 20.7 1.8E+02 0.0061 26.5 6.5 60 103-167 3-64 (283)
380 2q1s_A Putative nucleotide sug 20.5 47 0.0016 32.3 2.5 29 225-253 29-58 (377)
381 3h2s_A Putative NADH-flavin re 20.4 44 0.0015 29.5 2.1 26 230-255 2-27 (224)
382 3dfz_A SIRC, precorrin-2 dehyd 20.4 48 0.0016 31.4 2.4 125 224-369 27-161 (223)
383 1db3_A GDP-mannose 4,6-dehydra 20.3 45 0.0015 32.0 2.3 26 228-253 1-26 (372)
384 3brs_A Periplasmic binding pro 20.2 1.2E+02 0.0041 27.5 5.1 64 101-169 5-74 (289)
385 4ekn_B Aspartate carbamoyltran 20.1 6.3E+02 0.021 24.8 14.0 130 103-255 42-181 (306)
386 4egb_A DTDP-glucose 4,6-dehydr 20.1 36 0.0012 32.4 1.6 27 226-252 22-48 (346)
No 1
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=100.00 E-value=4.7e-67 Score=524.88 Aligned_cols=220 Identities=36% Similarity=0.546 Sum_probs=209.8
Q ss_pred hhhccccccccHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEeCCChhhHHHHHHHHHHHHHcCCeeeeeEEecCCccc
Q psy4615 66 KKANKAQIIDGKFIANTILEELKDEVKAWVALGHRVPTLTAILVGNDSASSTYVNNKMKSAAKVGEVNALGVLYHLTLFG 145 (477)
Q Consensus 66 ~~~~ma~ILdGk~lA~~I~~~lk~~v~~lk~~~g~~P~LaiI~vGdd~aS~~Yv~~k~k~a~~vGI~~~~~~~lp~~~~t 145 (477)
++++|++|||||++|++|++++++++++++++++++|+||+|+||+||+|..|+++|.|+|+++||+++ .++||+++ +
T Consensus 18 ~~~~Ma~ildGk~iA~~i~~~l~~~v~~l~~~~g~~P~LavIlVG~dpaS~~Yv~~K~k~c~~vGi~s~-~~~lp~~~-s 95 (303)
T 4b4u_A 18 FQGHMALVLDGRALAKQIEENLLVRVEALKAKTGRTPILATILVGDDGASATYVRMKGNACRRVGMDSL-KIELPQET-T 95 (303)
T ss_dssp ----CCEECCHHHHHHHHHHHHHHHHHHHHHHHSCCCEEEEEEESCCHHHHHHHHHHHHHHHHTTCEEE-EEEECTTC-C
T ss_pred ccCCCCEEeehHHHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHHcCCeEE-EEecCccC-C
Confidence 356799999999999999999999999999888899999999999999999999999999999999999 99999999 8
Q ss_pred HH---hhhccccCCCCCCccEEEEcCCCCCCCcHHHHHhhcCCCCCCCCCCccchHHhhcCCCCcccCCHHHHHHHHHHh
Q psy4615 146 RS---KLINPMSIPISTGVSSHISQLPLPEHMVERAVCNAVAPHKDVDGFNIVNVGRFCLDLKTLIPCTPLGVQELIRRY 222 (477)
Q Consensus 146 ~e---~~I~~L~~N~D~~V~GILVqlPLP~~ld~~~l~~aI~p~KDVDGl~p~nlg~l~~g~~~f~PcTa~Av~~Lle~~ 222 (477)
|+ +.|++| |+|++|||||||+|||+|+|+++++++|+|+||||||||.|+|+|+.|.+.|.||||.||++||++|
T Consensus 96 e~ell~~I~~L--N~D~~V~GIlVQlPLP~hid~~~i~~~I~p~KDVDG~hp~N~G~L~~g~~~~~PcTp~gv~~lL~~~ 173 (303)
T 4b4u_A 96 TEQLLAEIEKL--NANPDVHGILLQHPVPAQIDERACFDAISLAKDVDGVTCLGFGRMAMGEAAYGSATPAGIMTILKEN 173 (303)
T ss_dssp HHHHHHHHHHH--HTCTTCCEEEECSSCCTTSCHHHHHHHSCGGGCTTCCCHHHHHHHHTTCCCCCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHh--cCCCCccEEEEeCCCccccChHHHHhccCcccccCccCcchHHHhcCCCCcccCccHHHHHHHHHHH
Confidence 87 788889 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCeEEEECCCCCcchHHHHHhhhCCC-------------------------------------------------
Q psy4615 223 KVETFGKNAVVCGRSKNVGMPIAMLLHADGA------------------------------------------------- 253 (477)
Q Consensus 223 gi~l~Gk~vvViGrS~~VGkPLA~lL~~~~a------------------------------------------------- 253 (477)
+++++||+++|+|||++||+|+|+||.++|+
T Consensus 174 ~i~l~Gk~vvViGRS~iVGkPla~LL~~~~ATVTi~Hs~T~dl~~~~~~ADIvV~A~G~p~~i~~d~vk~GavVIDVGin 253 (303)
T 4b4u_A 174 NIEIAGKHAVVVGRSAILGKPMAMMLLQANATVTICHSRTQNLPELVKQADIIVGAVGKAELIQKDWIKQGAVVVDAGFH 253 (303)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHHHHHHTCSEEEECSCSTTCBCGGGSCTTCEEEECCCB
T ss_pred CCCCCCCEEEEEeccccccchHHHHHHhcCCEEEEecCCCCCHHHHhhcCCeEEeccCCCCccccccccCCCEEEEecee
Confidence 9999999999999999999999999998888
Q ss_pred -------------CccccceEEccCCCCCChhHHHHHHHHHHHHHHHHh
Q psy4615 254 -------------GVSEVAGYITPVPGGVGPMTVAMLMKNTILAAKHAV 289 (477)
Q Consensus 254 -------------~v~~~a~~iTPVpGGVGp~T~a~L~~N~l~a~~~~~ 289 (477)
+|.++|+|||||||||||||++||++|++.+++++.
T Consensus 254 ~~~~~~vGDVdf~~v~~~a~~iTPVPGGVGPmTiamLl~Ntv~aa~r~~ 302 (303)
T 4b4u_A 254 PRDGGGVGDIQLQGIEEIASAYTPVPGGVGPMTITTLIRQTVEAAEKAL 302 (303)
T ss_dssp CCTTSCBCSBCCTTGGGTCSEECCSSSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCeECCcCHHHHhhhCcEECCCCCCchHHHHHHHHHHHHHHHHHhc
Confidence 578899999999999999999999999999998754
No 2
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=100.00 E-value=1.2e-62 Score=490.75 Aligned_cols=216 Identities=43% Similarity=0.679 Sum_probs=206.5
Q ss_pred ccccccccHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEeCCChhhHHHHHHHHHHHHHcCCeeeeeEEecCCcccHH-
Q psy4615 69 NKAQIIDGKFIANTILEELKDEVKAWVALGHRVPTLTAILVGNDSASSTYVNNKMKSAAKVGEVNALGVLYHLTLFGRS- 147 (477)
Q Consensus 69 ~ma~ILdGk~lA~~I~~~lk~~v~~lk~~~g~~P~LaiI~vGdd~aS~~Yv~~k~k~a~~vGI~~~~~~~lp~~~~t~e- 147 (477)
+|+++||||++|++|++++++++++|+++++++|+|++|+||+||+|..|+++|.|+|+++||+++ .++||+++ ||+
T Consensus 1 ~ma~iidGk~ia~~i~~~~~~~v~~l~~~~~~~P~LavilvG~dpaS~~Yv~~k~k~~~~~Gi~~~-~~~lp~~~-s~~e 78 (288)
T 1b0a_A 1 MAAKIIDGKTIAQQVRSEVAQKVQARIAAGLRAPGLAVVLVGSNPASQIYVASKRKACEEVGFVSR-SYDLPETT-SEAE 78 (288)
T ss_dssp -CCEECCHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEEESCCHHHHHHHHHHHHHHHHHTCEEC-CEEECTTC-CHHH
T ss_pred CCCeEecHHHHHHHHHHHHHHHHHHHHhcCCCCceEEEEEeCCChhHHHHHHHHHHHHHHcCCEEE-EEECCCCC-CHHH
Confidence 468899999999999999999999999887688999999999999999999999999999999999 99999999 787
Q ss_pred --hhhccccCCCCCCccEEEEcCCCCCCCcHHHHHhhcCCCCCCCCCCccchHHhhcCCCCcccCCHHHHHHHHHHhCCC
Q psy4615 148 --KLINPMSIPISTGVSSHISQLPLPEHMVERAVCNAVAPHKDVDGFNIVNVGRFCLDLKTLIPCTPLGVQELIRRYKVE 225 (477)
Q Consensus 148 --~~I~~L~~N~D~~V~GILVqlPLP~~ld~~~l~~aI~p~KDVDGl~p~nlg~l~~g~~~f~PcTa~Av~~Lle~~gi~ 225 (477)
+.|++| |+|++|||||||+|||+|+|+++++++|+|+||||||||.|+|+|+.|.+.|.||||.||+++|++|+++
T Consensus 79 ll~~I~~l--N~D~~V~GIlvqlPLP~~id~~~i~~~I~p~KDVDG~~p~n~g~l~~g~~~~~PcTp~gi~~ll~~~~i~ 156 (288)
T 1b0a_A 79 LLELIDTL--NADNTIDGILVQLPLPAGIDNVKVLERIHPDKDVDGFHPYNVGRLCQRAPRLRPCTPRGIVTLLERYNID 156 (288)
T ss_dssp HHHHHHHH--HTCTTCCEEEECSSCCTTSCHHHHHTTSCTTTCTTCCSHHHHHHHHTTCCSSCCHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHh--cCCCCCcEEEEeCCCCCCCCHHHHHhccCCccCcccCCccchhHHhCCCCCCCCCcHHHHHHHHHHcCCC
Confidence 788899 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCeEEEECCCCCcchHHHHHhhhCCC----------------------------------------------------
Q psy4615 226 TFGKNAVVCGRSKNVGMPIAMLLHADGA---------------------------------------------------- 253 (477)
Q Consensus 226 l~Gk~vvViGrS~~VGkPLA~lL~~~~a---------------------------------------------------- 253 (477)
+.||+++|+|||++||+|+|.||..+|+
T Consensus 157 l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~~~~~~ADIVI~Avg~p~lI~~~~vk~GavVIDVgi~r~~ 236 (288)
T 1b0a_A 157 TFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHHVENADLLIVAVGKPGFIPGDWIKEGAIVIDVGINRLE 236 (288)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHHHHHHHCSEEEECSCCTTCBCTTTSCTTCEEEECCCEECT
T ss_pred CCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCchhHHHHhccCCEEEECCCCcCcCCHHHcCCCcEEEEccCCccC
Confidence 9999999999999999999999988887
Q ss_pred -----------CccccceEEccCCCCCChhHHHHHHHHHHHHHHHH
Q psy4615 254 -----------GVSEVAGYITPVPGGVGPMTVAMLMKNTILAAKHA 288 (477)
Q Consensus 254 -----------~v~~~a~~iTPVpGGVGp~T~a~L~~N~l~a~~~~ 288 (477)
++.++|+|||||||||||||++||++|++.+++++
T Consensus 237 ~g~l~GDVdf~~v~~~a~~iTPVPGGVGpmT~a~Ll~Ntv~aa~~~ 282 (288)
T 1b0a_A 237 NGKVVGDVVFEDAAKRASYITPVPGGVGPMTVATLIENTLQACVEY 282 (288)
T ss_dssp TSCEECSBCHHHHHHHCSEECCSSSSSHHHHHHHHHHHHHHHHHHT
T ss_pred CCCccCCcCHHHHhhhccEecCCCCCccHHHHHHHHHHHHHHHHHh
Confidence 34568999999999999999999999999998754
No 3
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=100.00 E-value=1.3e-61 Score=482.96 Aligned_cols=216 Identities=39% Similarity=0.617 Sum_probs=205.9
Q ss_pred ccccccccHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEeCCChhhHHHHHHHHHHHHHcCCeeeeeEEecCCcccHH-
Q psy4615 69 NKAQIIDGKFIANTILEELKDEVKAWVALGHRVPTLTAILVGNDSASSTYVNNKMKSAAKVGEVNALGVLYHLTLFGRS- 147 (477)
Q Consensus 69 ~ma~ILdGk~lA~~I~~~lk~~v~~lk~~~g~~P~LaiI~vGdd~aS~~Yv~~k~k~a~~vGI~~~~~~~lp~~~~t~e- 147 (477)
|++++||||++|++|++++++++++|+++++++|+|++|+||+||+|.+|+++|.|+|+++||+++ .++||+++ +|+
T Consensus 3 m~a~iidGk~ia~~i~~~~~~~v~~l~~~~~~~P~Lavilvg~dpaS~~Yv~~k~k~~~~~Gi~~~-~~~lp~~~-s~~e 80 (286)
T 4a5o_A 3 MTAQLIDGKAIAANLRQQIAQRVTERRQQGLRVPGLAVILVGTDPASQVYVAHKRKDCEEVGFLSQ-AYDLPAET-SQDD 80 (286)
T ss_dssp -CCEECCHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEEESCCHHHHHHHHHHHHHHHHTTCEEE-EEEECTTC-CHHH
T ss_pred cccEEeeHHHHHHHHHHHHHHHHHHHHhcCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCeEE-EEECCCCC-CHHH
Confidence 347899999999999999999999999988889999999999999999999999999999999999 99999999 877
Q ss_pred --hhhccccCCCCCCccEEEEcCCCCCCCcHHHHHhhcCCCCCCCCCCccchHHhhcCCCCcccCCHHHHHHHHHHhCCC
Q psy4615 148 --KLINPMSIPISTGVSSHISQLPLPEHMVERAVCNAVAPHKDVDGFNIVNVGRFCLDLKTLIPCTPLGVQELIRRYKVE 225 (477)
Q Consensus 148 --~~I~~L~~N~D~~V~GILVqlPLP~~ld~~~l~~aI~p~KDVDGl~p~nlg~l~~g~~~f~PcTa~Av~~Lle~~gi~ 225 (477)
+.|++| |+|++|||||||+|||+|+|+++++++|+|+||||||||.|+|+++.|.+.|.||||.||++||++|+++
T Consensus 81 ll~~I~~l--N~d~~v~GIlVqlPLP~~id~~~v~~~I~p~KDVDG~~~~N~g~l~~g~~~~~PcTp~gv~~lL~~~~i~ 158 (286)
T 4a5o_A 81 LLALIDRL--NDDPAIDGILVQLPLPAHLDASLLLERIHPDKDVDGFHPYNIGRLAQRMPLLRPCTPKGIMTLLASTGAD 158 (286)
T ss_dssp HHHHHHHH--HTCTTCCEEEECSSCCTTSCHHHHHHTSCGGGCTTCCSHHHHHHHHTTCCSSCCHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHH--hCCCCCCEEEEcCCCCCCcCHHHHHhhCCcccccccCChhhhHHHhcCCCCCCCCCHHHHHHHHHHhCCC
Confidence 788889 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCeEEEECCCCCcchHHHHHhhhCCC----------------------------------------------------
Q psy4615 226 TFGKNAVVCGRSKNVGMPIAMLLHADGA---------------------------------------------------- 253 (477)
Q Consensus 226 l~Gk~vvViGrS~~VGkPLA~lL~~~~a---------------------------------------------------- 253 (477)
++||+++|+|||.+||+|+|.||+.+|+
T Consensus 159 l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T~~L~~~~~~ADIVI~Avg~p~~I~~~~vk~GavVIDvgi~~~~ 238 (286)
T 4a5o_A 159 LYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFTRDLADHVSRADLVVVAAGKPGLVKGEWIKEGAIVIDVGINRQA 238 (286)
T ss_dssp CTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTCSCHHHHHHTCSEEEECCCCTTCBCGGGSCTTCEEEECCSCSSC
T ss_pred CCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCCcCHHHHhccCCEEEECCCCCCCCCHHHcCCCeEEEEecccccc
Confidence 9999999999999999999999988877
Q ss_pred -----------CccccceEEccCCCCCChhHHHHHHHHHHHHHHHH
Q psy4615 254 -----------GVSEVAGYITPVPGGVGPMTVAMLMKNTILAAKHA 288 (477)
Q Consensus 254 -----------~v~~~a~~iTPVpGGVGp~T~a~L~~N~l~a~~~~ 288 (477)
++.++|+|||||||||||||++||++|++.+++++
T Consensus 239 ~gkl~GDVdf~~v~~~a~~iTPVPGGVGpmT~a~Ll~ntv~aa~~~ 284 (286)
T 4a5o_A 239 DGRLVGDVEYEVAAQRASWITPVPGGVGPMTRACLLENTLHAAEHL 284 (286)
T ss_dssp CCCSSCSBCHHHHHHHCSEECCSSCSHHHHHHHHHHHHHHHHHHHT
T ss_pred cCCcccCccHHHHHhhceEeCCCCCcchHHHHHHHHHHHHHHHHHh
Confidence 34578999999999999999999999999988653
No 4
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=100.00 E-value=4.2e-61 Score=482.24 Aligned_cols=215 Identities=41% Similarity=0.602 Sum_probs=204.4
Q ss_pred ccccccHHHHHHHHHHHHHHHHHHHHcC-CCCCEEEEEEeCCChhhHHHHHHHHHHHHHcCCeeeeeEEecCCcccHH--
Q psy4615 71 AQIIDGKFIANTILEELKDEVKAWVALG-HRVPTLTAILVGNDSASSTYVNNKMKSAAKVGEVNALGVLYHLTLFGRS-- 147 (477)
Q Consensus 71 a~ILdGk~lA~~I~~~lk~~v~~lk~~~-g~~P~LaiI~vGdd~aS~~Yv~~k~k~a~~vGI~~~~~~~lp~~~~t~e-- 147 (477)
+++||||++|++|++++++++++|++++ +++|+||+|+||+||+|..|+++|.|+|+++||+++ .++||+++ ||+
T Consensus 4 a~iidGk~ia~~i~~~~~~~v~~l~~~~~~~~P~LavilvG~dpaS~~Yv~~k~k~~~~~Gi~~~-~~~lp~~~-s~~el 81 (301)
T 1a4i_A 4 AEILNGKEISAQIRARLKNQVTQLKEQVPGFTPRLAILQVGNRDDSNLYINVKLKAAEEIGIKAT-HIKLPRTT-TESEV 81 (301)
T ss_dssp CEECCHHHHHHHHHHHHHHHHHHHHHHSTTCCCEEEEEEESCCHHHHHHHHHHHHHHHHHTCEEE-EEEECTTC-CHHHH
T ss_pred CEEeeHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEEeCCChhHHHHHHHHHHHHHHcCCEEE-EEECCCCC-CHHHH
Confidence 7899999999999999999999999886 578999999999999999999999999999999999 99999999 887
Q ss_pred -hhhccccCCCCCCccEEEEcCCCCCC--CcHHHHHhhcCCCCCCCCCCccchHHhhcCC--CCcccCCHHHHHHHHHHh
Q psy4615 148 -KLINPMSIPISTGVSSHISQLPLPEH--MVERAVCNAVAPHKDVDGFNIVNVGRFCLDL--KTLIPCTPLGVQELIRRY 222 (477)
Q Consensus 148 -~~I~~L~~N~D~~V~GILVqlPLP~~--ld~~~l~~aI~p~KDVDGl~p~nlg~l~~g~--~~f~PcTa~Av~~Lle~~ 222 (477)
+.|++| |+|++|||||||+|||+| +|+++++++|+|+||||||||.|+|+|+.|. +.|.||||.||+++|++|
T Consensus 82 l~~I~~l--N~D~~V~GIlvqlPLP~~~~id~~~i~~~I~p~KDVDG~hp~N~G~l~~g~~~~~~~PcTp~gi~~ll~~~ 159 (301)
T 1a4i_A 82 MKYITSL--NEDSTVHGFLVQLPLDSENSINTEEVINAIAPEKDVDGLTSINAGRLARGDLNDCFIPCTPKGCLELIKET 159 (301)
T ss_dssp HHHHHHH--HHCTTCCEEEECSSCCCSSCCCHHHHHHTSCGGGBTTCCSHHHHHHHHTTCCSSCCCCHHHHHHHHHHHTT
T ss_pred HHHHHHh--cCCCCCcEEEEeccCCCCCccCHHHHHhccCCCCCccCCChhhHHHHhcCCCCCCccCchHHHHHHHHHHc
Confidence 888899 999999999999999999 9999999999999999999999999999987 889999999999999999
Q ss_pred CCCCCCCeEEEECCCCCcchHHHHHhhhCCC-------------------------------------------------
Q psy4615 223 KVETFGKNAVVCGRSKNVGMPIAMLLHADGA------------------------------------------------- 253 (477)
Q Consensus 223 gi~l~Gk~vvViGrS~~VGkPLA~lL~~~~a------------------------------------------------- 253 (477)
++++.||+++|+|||++||+|+|.||..+++
T Consensus 160 ~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~~~~~~ADIVI~Avg~p~~I~~~~vk~GavVIDVgi~ 239 (301)
T 1a4i_A 160 GVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLDEEVNKGDILVVATGQPEMVKGEWIKPGAIVIDCGIN 239 (301)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHHHHHTTCSEEEECCCCTTCBCGGGSCTTCEEEECCCB
T ss_pred CCCCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECCcccHHHHhccCCEEEECCCCcccCCHHHcCCCcEEEEccCC
Confidence 9999999999999999999999999988877
Q ss_pred --------------------CccccceEEccCCCCCChhHHHHHHHHHHHHHHHHh
Q psy4615 254 --------------------GVSEVAGYITPVPGGVGPMTVAMLMKNTILAAKHAV 289 (477)
Q Consensus 254 --------------------~v~~~a~~iTPVpGGVGp~T~a~L~~N~l~a~~~~~ 289 (477)
++.++|+|||||||||||||++||++|++.+++++.
T Consensus 240 ~~~d~~~~~g~klvGDVdf~~v~~~a~~iTPVPGGVGpmTiamLl~Ntv~aa~~~~ 295 (301)
T 1a4i_A 240 YVPDDKKPNGRKVVGDVAYDEAKERASFITPVPGGVGPMTVAMLMQSTVESAKRFL 295 (301)
T ss_dssp C----------CCBCSBCHHHHTTTCSEECCSSSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcccccccCCCeeeccccHHHhhhhceEeCCCCCCccHHHHHHHHHHHHHHHHHHh
Confidence 134579999999999999999999999999987543
No 5
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=100.00 E-value=1.4e-60 Score=474.55 Aligned_cols=212 Identities=39% Similarity=0.644 Sum_probs=203.1
Q ss_pred ccccccHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEeCCChhhHHHHHHHHHHHHHcCCeeeeeEEecCCcccHH---
Q psy4615 71 AQIIDGKFIANTILEELKDEVKAWVALGHRVPTLTAILVGNDSASSTYVNNKMKSAAKVGEVNALGVLYHLTLFGRS--- 147 (477)
Q Consensus 71 a~ILdGk~lA~~I~~~lk~~v~~lk~~~g~~P~LaiI~vGdd~aS~~Yv~~k~k~a~~vGI~~~~~~~lp~~~~t~e--- 147 (477)
+++||||++|++|++++++++++|++++ ++|+|++|+||+||+|..|+++|.|+|+++||+++ .++||+++ ||+
T Consensus 3 a~iidGk~ia~~i~~~~~~~v~~l~~~g-~~P~Lavilvg~dpas~~Yv~~k~k~~~~~Gi~~~-~~~lp~~~-s~~ell 79 (281)
T 2c2x_A 3 AIMLDGKATRDEIFGDLKQRVAALDAAG-RTPGLGTILVGDDPGSQAYVRGKHADCAKVGITSI-RRDLPADI-STATLN 79 (281)
T ss_dssp CEECCHHHHHHHHHHHHHHHHHHHHHTT-CCCEEEEEEESCCHHHHHHHHHHHHHHHHHTCEEE-EEEECTTC-CHHHHH
T ss_pred CEEeeHHHHHHHHHHHHHHHHHHHHhcC-CCceEEEEEeCCChhhHHHHHHHHHHHHHcCCEEE-EEECCCCC-CHHHHH
Confidence 5799999999999999999999999874 78999999999999999999999999999999999 99999999 887
Q ss_pred hhhccccCCCCCCccEEEEcCCCCCCCcHHHHHhhcCCCCCCCCCCccchHHhhcCCCCcccCCHHHHHHHHHHhCCCCC
Q psy4615 148 KLINPMSIPISTGVSSHISQLPLPEHMVERAVCNAVAPHKDVDGFNIVNVGRFCLDLKTLIPCTPLGVQELIRRYKVETF 227 (477)
Q Consensus 148 ~~I~~L~~N~D~~V~GILVqlPLP~~ld~~~l~~aI~p~KDVDGl~p~nlg~l~~g~~~f~PcTa~Av~~Lle~~gi~l~ 227 (477)
+.|++| |+|++|||||||+|||+|+|+++++++|+|+||||||||.|+|+|+.|.+.|.||||.|+++++++|++++.
T Consensus 80 ~~i~~l--N~D~~v~GIlvqlPlP~~id~~~i~~~I~p~KDVDG~~p~n~g~l~~g~~~~~PcTp~gi~~ll~~~~i~l~ 157 (281)
T 2c2x_A 80 ETIDEL--NANPDCTGYIVQLPLPKHLDENAALERVDPAKDADGLHPTNLGRLVLGTPAPLPCTPRGIVHLLRRYDISIA 157 (281)
T ss_dssp HHHHHH--HHCTTCCEEEECSCCCTTSCHHHHHHHSCGGGBTTSCCHHHHHHHHHTCCCCCCHHHHHHHHHHHHTTCCCT
T ss_pred HHHHHh--cCCCCCCEEEEeCCCCCCCCHHHHHhhcCccCCccCCChhhHHHHhCCCCCCCCChHHHHHHHHHHcCCCCC
Confidence 888899 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEECCCCCcchHHHHHhhhC--CC----------------------------------------------------
Q psy4615 228 GKNAVVCGRSKNVGMPIAMLLHAD--GA---------------------------------------------------- 253 (477)
Q Consensus 228 Gk~vvViGrS~~VGkPLA~lL~~~--~a---------------------------------------------------- 253 (477)
||+++|+|||++||+|+|.||..+ ++
T Consensus 158 gk~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~~t~~L~~~~~~ADIVI~Avg~p~~I~~~~vk~GavVIDVgi~r~~ 237 (281)
T 2c2x_A 158 GAHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTGTRDLPALTRQADIVVAAVGVAHLLTADMVRPGAAVIDVGVSRTD 237 (281)
T ss_dssp TCEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTTCSCHHHHHTTCSEEEECSCCTTCBCGGGSCTTCEEEECCEEEET
T ss_pred CCEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEECchhHHHHHHhhCCEEEECCCCCcccCHHHcCCCcEEEEccCCCCC
Confidence 999999999999999999999998 77
Q ss_pred ---------CccccceEEccCCCCCChhHHHHHHHHHHHHHHH
Q psy4615 254 ---------GVSEVAGYITPVPGGVGPMTVAMLMKNTILAAKH 287 (477)
Q Consensus 254 ---------~v~~~a~~iTPVpGGVGp~T~a~L~~N~l~a~~~ 287 (477)
++.++|+|||||||||||||++||++|++.++++
T Consensus 238 ~glvGDVd~~v~~~a~~iTPVPGGVGpmT~a~Ll~ntv~aa~~ 280 (281)
T 2c2x_A 238 DGLVGDVHPDVWELAGHVSPNPGGVGPLTRAFLLTNVVELAER 280 (281)
T ss_dssp TEEEESBCGGGGGTCSEEECSSSSSHHHHHHHHHHHHHHHHHH
T ss_pred CCccCccccchhhheeeecCCCCCccHHHHHHHHHHHHHHHHh
Confidence 2456899999999999999999999999998863
No 6
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=100.00 E-value=9.4e-61 Score=476.74 Aligned_cols=214 Identities=41% Similarity=0.690 Sum_probs=204.4
Q ss_pred ccccccccHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEeCCChhhHHHHHHHHHHHHHcCCeeeeeEEecCCcccHH-
Q psy4615 69 NKAQIIDGKFIANTILEELKDEVKAWVALGHRVPTLTAILVGNDSASSTYVNNKMKSAAKVGEVNALGVLYHLTLFGRS- 147 (477)
Q Consensus 69 ~ma~ILdGk~lA~~I~~~lk~~v~~lk~~~g~~P~LaiI~vGdd~aS~~Yv~~k~k~a~~vGI~~~~~~~lp~~~~t~e- 147 (477)
|++++||||++|++|++++++++++|++++ .+|+|++|+||+||+|.+|+++|.|+|+++||+++ .++||+++ +|+
T Consensus 2 ~~~~iidGk~~a~~i~~~~~~~v~~l~~~~-~~P~Lavilvg~dpaS~~Yv~~k~k~~~~~Gi~~~-~~~lp~~~-s~~e 78 (285)
T 3p2o_A 2 NAMTLLDGKALSAKIKEELKEKNQFLKSKG-IESCLAVILVGDNPASQTYVKSKAKACEECGIKSL-VYHLNENI-TQNE 78 (285)
T ss_dssp CCCEECCHHHHHHHHHHHHHHHHHHHHTTT-CCCEEEEEEESCCHHHHHHHHHHHHHHHHHTCEEE-EEEECTTC-CHHH
T ss_pred CCCEEeehHHHHHHHHHHHHHHHHHHHhcC-CCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCeEE-EEECCCCC-CHHH
Confidence 567899999999999999999999998776 49999999999999999999999999999999999 99999999 777
Q ss_pred --hhhccccCCCCCCccEEEEcCCCCCCCcHHHHHhhcCCCCCCCCCCccchHHhhcCCCC-cccCCHHHHHHHHHHhCC
Q psy4615 148 --KLINPMSIPISTGVSSHISQLPLPEHMVERAVCNAVAPHKDVDGFNIVNVGRFCLDLKT-LIPCTPLGVQELIRRYKV 224 (477)
Q Consensus 148 --~~I~~L~~N~D~~V~GILVqlPLP~~ld~~~l~~aI~p~KDVDGl~p~nlg~l~~g~~~-f~PcTa~Av~~Lle~~gi 224 (477)
+.|++| |+|++|||||||+|||+|+|+++++++|+|+||||||||.|+|+++.|.+. |+||||.||++||++|++
T Consensus 79 ll~~I~~l--N~d~~v~GIlvqlPlp~~id~~~v~~~I~p~KDVDg~~~~N~g~l~~g~~~g~~PcTp~gv~~lL~~~~i 156 (285)
T 3p2o_A 79 LLALINTL--NHDDSVHGILVQLPLPDHICKDLILESIISSKDVDGFHPINVGYLNLGLESGFLPCTPLGVMKLLKAYEI 156 (285)
T ss_dssp HHHHHHHH--HHCTTCCEEEECSCCCTTSCHHHHHHHSCGGGCTTCCSHHHHHHHHTTCCSSCCCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHH--hCCCCCCEEEecCCCCCCcCHHHHHhhCCcccccccCCHhhhhhhhcCCCCCCCCCCHHHHHHHHHHhCC
Confidence 888899 999999999999999999999999999999999999999999999999988 999999999999999999
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCC---------------------------------------------------
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGA--------------------------------------------------- 253 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a--------------------------------------------------- 253 (477)
+++||+++|+|||.+||+|+|.||+.+|+
T Consensus 157 ~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t~~L~~~~~~ADIVI~Avg~p~~I~~~~vk~GavVIDVgi~~~ 236 (285)
T 3p2o_A 157 DLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDLSLYTRQADLIIVAAGCVNLLRSDMVKEGVIVVDVGINRL 236 (285)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSCHHHHHTTCSEEEECSSCTTCBCGGGSCTTEEEEECCCEEC
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCchhHHHHhhcCCEEEECCCCCCcCCHHHcCCCeEEEEeccCcc
Confidence 99999999999999999999999988877
Q ss_pred ------------CccccceEEccCCCCCChhHHHHHHHHHHHHHHH
Q psy4615 254 ------------GVSEVAGYITPVPGGVGPMTVAMLMKNTILAAKH 287 (477)
Q Consensus 254 ------------~v~~~a~~iTPVpGGVGp~T~a~L~~N~l~a~~~ 287 (477)
++.++|+|||||||||||||++||++|++.++++
T Consensus 237 ~~gkl~GDVdf~~v~~~a~~iTPVPGGVGpmT~a~Ll~ntv~a~~~ 282 (285)
T 3p2o_A 237 ESGKIVGDVDFEEVSKKSSYITPVPGGVGPMTIAMLLENTVKSAKN 282 (285)
T ss_dssp TTSCEECSBCHHHHTTTEEEECCSSSSHHHHHHHHHHHHHHHHHHT
T ss_pred cCCCEeccccHHHHHhhheEeCCCCCcCcHHHHHHHHHHHHHHHHH
Confidence 3567899999999999999999999999998864
No 7
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=100.00 E-value=2.5e-60 Score=476.59 Aligned_cols=216 Identities=44% Similarity=0.617 Sum_probs=204.9
Q ss_pred cccccccHHHHHHHHHHHHHHHHHHHHcCC-CCCEEEEEEeCCChhhHHHHHHHHHHHHHcCCeeeeeEEecCCcccHH-
Q psy4615 70 KAQIIDGKFIANTILEELKDEVKAWVALGH-RVPTLTAILVGNDSASSTYVNNKMKSAAKVGEVNALGVLYHLTLFGRS- 147 (477)
Q Consensus 70 ma~ILdGk~lA~~I~~~lk~~v~~lk~~~g-~~P~LaiI~vGdd~aS~~Yv~~k~k~a~~vGI~~~~~~~lp~~~~t~e- 147 (477)
|+++||||++|++|++++++++++|+++++ ++|+|++|+||+||+|..|+++|.|+|+++||+++ .++||+++ +|+
T Consensus 5 ma~iidGk~ia~~i~~~~~~~v~~l~~~~~~~~P~Lavilvg~dpaS~~Yv~~k~k~~~~~Gi~~~-~~~lp~~~-s~~e 82 (300)
T 4a26_A 5 SAQIIDGKAIAAAIRSELKDKVAALRELYGGRVPGLASIIVGQRMDSKKYVQLKHKAAAEVGMASF-NVELPEDI-SQEV 82 (300)
T ss_dssp CCEECCHHHHHHHHHHHHHHHHHHHHHHTTTCCCEEEEEEESCCHHHHHHHHHHHHHHHHTTCEEE-EEEECTTC-CHHH
T ss_pred ccEEeehHHHHHHHHHHHHHHHHHHHHhCCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCeEE-EEECCCCC-CHHH
Confidence 689999999999999999999999998876 99999999999999999999999999999999999 99999999 877
Q ss_pred --hhhccccCCCCCCccEEEEcCCCCCCCcHHHHHhhcCCCCCCCCCCccchHHhhcC--CCCcccCCHHHHHHHHHHhC
Q psy4615 148 --KLINPMSIPISTGVSSHISQLPLPEHMVERAVCNAVAPHKDVDGFNIVNVGRFCLD--LKTLIPCTPLGVQELIRRYK 223 (477)
Q Consensus 148 --~~I~~L~~N~D~~V~GILVqlPLP~~ld~~~l~~aI~p~KDVDGl~p~nlg~l~~g--~~~f~PcTa~Av~~Lle~~g 223 (477)
+.|++| |+|++|||||||+|||+|+|+++++++|+|+||||||||.|+|+|+.| .+.|.||||.||++||++|+
T Consensus 83 ll~~I~~l--N~d~~v~GIlVqlPLP~~id~~~v~~~I~p~KDVDG~~~~N~G~l~~g~~~~~~~PcTp~gv~~lL~~~~ 160 (300)
T 4a26_A 83 LEVNVEKL--NNDPNCHGIIVQLPLPKHLNENRAIEKIHPHKDADALLPVNVGLLHYKGREPPFTPCTAKGVIVLLKRCG 160 (300)
T ss_dssp HHHHHHHH--HTCTTCCEEEECSCCCTTSCHHHHHHTSCGGGCTTCCSHHHHHHHHCTTCCCSCCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHh--cCCCCCCEEEEcCCCCCCCCHHHHHhhCCcccccccCCcceEEEeecCCCcCCCCCCCHHHHHHHHHHcC
Confidence 888899 999999999999999999999999999999999999999999999998 58899999999999999999
Q ss_pred CCCCCCeEEEECCCCCcchHHHHHhhhCCC--------------------------------------------------
Q psy4615 224 VETFGKNAVVCGRSKNVGMPIAMLLHADGA-------------------------------------------------- 253 (477)
Q Consensus 224 i~l~Gk~vvViGrS~~VGkPLA~lL~~~~a-------------------------------------------------- 253 (477)
++++||+++|+|||.+||+|+|.+|..+|+
T Consensus 161 i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~~l~l~~~~~~ADIVI~Avg~p~~I~~~~vk~GavVIDvgi 240 (300)
T 4a26_A 161 IEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTSTEDMIDYLRTADIVIAAMGQPGYVKGEWIKEGAAVVDVGT 240 (300)
T ss_dssp CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSCHHHHHHHHHTCSEEEECSCCTTCBCGGGSCTTCEEEECCC
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhhhccCCEEEECCCCCCCCcHHhcCCCcEEEEEec
Confidence 999999999999999999999999976665
Q ss_pred ---------------------CccccceEEccCCCCCChhHHHHHHHHHHHHHHHHh
Q psy4615 254 ---------------------GVSEVAGYITPVPGGVGPMTVAMLMKNTILAAKHAV 289 (477)
Q Consensus 254 ---------------------~v~~~a~~iTPVpGGVGp~T~a~L~~N~l~a~~~~~ 289 (477)
++.++|+|||||||||||||++||++|++.+++++.
T Consensus 241 ~~~~~~~~~~g~kl~GDVdf~~v~~~a~~iTPVPGGVGpmT~a~Ll~Ntv~aa~~~~ 297 (300)
T 4a26_A 241 TPVPDPSRKDGYRLVGDVCFEEAAARAAWISPVPGGVGPMTIAMLLENTLEAFKAAL 297 (300)
T ss_dssp EEESCSCSTTSCEEECSBCHHHHTTTCSEEECTTTSSSHHHHHHHHHHHHHHHHHHH
T ss_pred cCCcCCcccCCceeecCccHHHHHhhceEeCCCCCcChHHHHHHHHHHHHHHHHHHh
Confidence 235679999999999999999999999999987653
No 8
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=100.00 E-value=1.5e-60 Score=475.22 Aligned_cols=214 Identities=40% Similarity=0.607 Sum_probs=205.0
Q ss_pred ccccccHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEeCCChhhHHHHHHHHHHHHHcCCeeeeeEEecCCcccHH---
Q psy4615 71 AQIIDGKFIANTILEELKDEVKAWVALGHRVPTLTAILVGNDSASSTYVNNKMKSAAKVGEVNALGVLYHLTLFGRS--- 147 (477)
Q Consensus 71 a~ILdGk~lA~~I~~~lk~~v~~lk~~~g~~P~LaiI~vGdd~aS~~Yv~~k~k~a~~vGI~~~~~~~lp~~~~t~e--- 147 (477)
+++||||++|++|++++++++++|+++++++|+|++|+||+||+|.+|+++|.|+|+++||+++ .++||+++ +|+
T Consensus 4 ~~ildGk~ia~~i~~~~~~~v~~l~~~~~~~P~Lavilvg~dpaS~~Yv~~k~k~~~~~Gi~~~-~~~lp~~~-s~~ell 81 (285)
T 3l07_A 4 MILIDGKSLSKDLKERLATQVQEYKHHTAITPKLVAIIVGNDPASKTYVASKEKACAQVGIDSQ-VITLPEHT-TESELL 81 (285)
T ss_dssp CEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEESCCHHHHHHHHHHHHHHHHHTCEEE-EEEECTTC-CHHHHH
T ss_pred CEEeehHHHHHHHHHHHHHHHHHHHhcCCCCceEEEEEECCCHHHHHHHHHHHHHHHHcCCeEE-EEECCCCC-CHHHHH
Confidence 5689999999999999999999999887899999999999999999999999999999999999 99999999 877
Q ss_pred hhhccccCCCCCCccEEEEcCCCCCCCcHHHHHhhcCCCCCCCCCCccchHHhhcCC-CCcccCCHHHHHHHHHHhCCCC
Q psy4615 148 KLINPMSIPISTGVSSHISQLPLPEHMVERAVCNAVAPHKDVDGFNIVNVGRFCLDL-KTLIPCTPLGVQELIRRYKVET 226 (477)
Q Consensus 148 ~~I~~L~~N~D~~V~GILVqlPLP~~ld~~~l~~aI~p~KDVDGl~p~nlg~l~~g~-~~f~PcTa~Av~~Lle~~gi~l 226 (477)
+.|++| |+|++|||||||+|||+|+|+++++++|+|+||||||||.|+|+++.|. +.|.||||.||+++|++|++++
T Consensus 82 ~~I~~l--N~d~~v~GIlvqlPlp~~id~~~v~~~I~p~KDVDG~~~~N~G~l~~g~~~~~~PcTp~gv~~lL~~~~i~l 159 (285)
T 3l07_A 82 ELIDQL--NNDSSVHAILVQLPLPAHINKNNVIYSIKPEKDVDGFHPTNVGRLQLRDKKCLESCTPKGIMTMLREYGIKT 159 (285)
T ss_dssp HHHHHH--HTCTTCCEEEECSSCCTTSCHHHHHHHSCGGGBTTCCSHHHHHHHHHTCTTCCCCHHHHHHHHHHHHTTCCC
T ss_pred HHHHHH--hCCCCCcEEEEcCCCCCCcCHHHHHhhCCcccccccCChhheeehhcCCCCCCCCCCHHHHHHHHHHhCCCC
Confidence 888899 9999999999999999999999999999999999999999999999998 8999999999999999999999
Q ss_pred CCCeEEEECCCCCcchHHHHHhhhCCC-----------------------------------------------------
Q psy4615 227 FGKNAVVCGRSKNVGMPIAMLLHADGA----------------------------------------------------- 253 (477)
Q Consensus 227 ~Gk~vvViGrS~~VGkPLA~lL~~~~a----------------------------------------------------- 253 (477)
+||+++|+|||.+||+|+|.||..+|+
T Consensus 160 ~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~~~~~~ADIVI~Avg~p~~I~~~~vk~GavVIDvgi~~~~g 239 (285)
T 3l07_A 160 EGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDLKSHTTKADILIVAVGKPNFITADMVKEGAVVIDVGINHVDG 239 (285)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHHHHHTTCSEEEECCCCTTCBCGGGSCTTCEEEECCCEEETT
T ss_pred CCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchhHHHhcccCCEEEECCCCCCCCCHHHcCCCcEEEEecccCcCC
Confidence 999999999999999999999988877
Q ss_pred ---------CccccceEEccCCCCCChhHHHHHHHHHHHHHHHH
Q psy4615 254 ---------GVSEVAGYITPVPGGVGPMTVAMLMKNTILAAKHA 288 (477)
Q Consensus 254 ---------~v~~~a~~iTPVpGGVGp~T~a~L~~N~l~a~~~~ 288 (477)
++.++|+|||||||||||||++||++|++.+++++
T Consensus 240 ~l~GDVdf~~v~~~a~~iTPVPGGVGpmT~a~Ll~ntv~a~~~~ 283 (285)
T 3l07_A 240 KIVGDVDFAAVKDKVAAITPVPGGVGPMTITELLYNTFQCAQEL 283 (285)
T ss_dssp EEECSBCHHHHTTTCSEECCSSSSSHHHHHHHHHHHHHHHHHHT
T ss_pred ceecCccHHHHHhhheEeCCCCCcChHHHHHHHHHHHHHHHHHh
Confidence 35678999999999999999999999999988654
No 9
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=100.00 E-value=8e-60 Score=468.05 Aligned_cols=207 Identities=28% Similarity=0.434 Sum_probs=197.8
Q ss_pred cccccHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEeCCChhhHHHHHHHHHHHHHcCCeeeeeEEecCCcccHH---h
Q psy4615 72 QIIDGKFIANTILEELKDEVKAWVALGHRVPTLTAILVGNDSASSTYVNNKMKSAAKVGEVNALGVLYHLTLFGRS---K 148 (477)
Q Consensus 72 ~ILdGk~lA~~I~~~lk~~v~~lk~~~g~~P~LaiI~vGdd~aS~~Yv~~k~k~a~~vGI~~~~~~~lp~~~~t~e---~ 148 (477)
++||||++|++|++++++++++| +++|+|++|+||+||+|.+|+++|.|+|+++|| ++ .++||+++ ||+ +
T Consensus 2 ~ildGk~~a~~i~~~~~~~v~~l----~~~P~Lavilvg~dpaS~~Yv~~k~k~~~~~Gi-~~-~~~lp~~~-s~~ell~ 74 (276)
T 3ngx_A 2 KILRGEEIAEKKAENLHGIIERS----GLEPSLKLIQIGDNEAASIYARAKIRRGKKIGI-AV-DLEKYDDI-SMKDLLK 74 (276)
T ss_dssp CBCCCHHHHHHHHHHHHHHHHHT----TCCCEEEEEEESCCHHHHHHHHHHHHHHHHHTC-EE-EEEEESSC-CHHHHHH
T ss_pred EEeeHHHHHHHHHHHHHHHHHHh----CCCCcEEEEEeCCCHHHHHHHHHHHHHHHHCCe-EE-EEECCCCC-CHHHHHH
Confidence 58999999999999999999987 589999999999999999999999999999999 99 99999999 887 8
Q ss_pred hhccccCCCCCCccEEEEcCCCCCCCcHHHHHhhcCCCCCCCCCCccchHHhhcCCCCcccCCHHHHHHHHHHhCCCCCC
Q psy4615 149 LINPMSIPISTGVSSHISQLPLPEHMVERAVCNAVAPHKDVDGFNIVNVGRFCLDLKTLIPCTPLGVQELIRRYKVETFG 228 (477)
Q Consensus 149 ~I~~L~~N~D~~V~GILVqlPLP~~ld~~~l~~aI~p~KDVDGl~p~nlg~l~~g~~~f~PcTa~Av~~Lle~~gi~l~G 228 (477)
.|++| |+|++|||||||+|||+|+|+++++++|+|+||||||||.|+|+|+.|.+.|.||||.||+++|++|+ ++|
T Consensus 75 ~I~~l--N~D~~v~GIlvqlPLP~~id~~~v~~~I~p~KDVDG~~p~n~G~l~~g~~~~~PcTp~gv~~lL~~~~--l~G 150 (276)
T 3ngx_A 75 RIDDL--AKDPQINGIMIENPLPKGFDYYEIVRNIPYYKDVDALSPYNQGLIALNREFLVPATPRAVIDIMDYYG--YHE 150 (276)
T ss_dssp HHHHH--HHCTTCCEEEECSCCCTTCCHHHHHTTSCGGGBTTCCSHHHHHHHHTTCCSSCCHHHHHHHHHHHHHT--CCS
T ss_pred HHHHH--cCCCCCcEEEEeCCCCCCCCHHHHHhhCCCCCcccCCCccchhhhhcCCCCCCCCcHHHHHHHHHHhC--cCC
Confidence 88899 99999999999999999999999999999999999999999999999999999999999999999999 999
Q ss_pred CeEEEECCCCCcchHHHHHhhhCCC-------------------------------------------------------
Q psy4615 229 KNAVVCGRSKNVGMPIAMLLHADGA------------------------------------------------------- 253 (477)
Q Consensus 229 k~vvViGrS~~VGkPLA~lL~~~~a------------------------------------------------------- 253 (477)
|+++|+|||.+||+|+|.+|..+|+
T Consensus 151 k~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t~~L~~~~~~ADIVI~Avg~p~~I~~~~vk~GavVIDvgi~~~~gkl 230 (276)
T 3ngx_A 151 NTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKTKDIGSMTRSSKIVVVAVGRPGFLNREMVTPGSVVIDVGINYVNDKV 230 (276)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSCHHHHHHHSSEEEECSSCTTCBCGGGCCTTCEEEECCCEEETTEE
T ss_pred CEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCcccHHHhhccCCEEEECCCCCccccHhhccCCcEEEEeccCccCCce
Confidence 9999999999999999999988887
Q ss_pred -------CccccceEEccCCCCCChhHHHHHHHHHHHHHHHHh
Q psy4615 254 -------GVSEVAGYITPVPGGVGPMTVAMLMKNTILAAKHAV 289 (477)
Q Consensus 254 -------~v~~~a~~iTPVpGGVGp~T~a~L~~N~l~a~~~~~ 289 (477)
++.++|+|||||||||||||++||++|++.+++++.
T Consensus 231 ~GDVdf~~v~~~a~~iTPVPGGVGpmT~a~Ll~n~v~a~~~~~ 273 (276)
T 3ngx_A 231 VGDANFEDLSEYVEAITPVPGGVGPITATNILENVVKAAEFQK 273 (276)
T ss_dssp ECSBCHHHHHTTSSEECCTTTSSHHHHHHHHHHHHHHHHHHHH
T ss_pred eccccHHHHhhhceEeCCCCCcChHHHHHHHHHHHHHHHHHHh
Confidence 346789999999999999999999999999987543
No 10
>1vko_A Inositol-3-phosphate synthase; CE21227, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD; 2.30A {Caenorhabditis elegans} SCOP: c.2.1.3 d.81.1.3
Probab=100.00 E-value=5.8e-60 Score=496.69 Aligned_cols=260 Identities=39% Similarity=0.576 Sum_probs=237.3
Q ss_pred CCcHHHHHhhcCCCCCCCCCCccchHHhhc---CCC--CcccCCH--HHHHHHHHHhCCCCCCCeEEEECCCCCcchHHH
Q psy4615 173 HMVERAVCNAVAPHKDVDGFNIVNVGRFCL---DLK--TLIPCTP--LGVQELIRRYKVETFGKNAVVCGRSKNVGMPIA 245 (477)
Q Consensus 173 ~ld~~~l~~aI~p~KDVDGl~p~nlg~l~~---g~~--~f~PcTa--~Av~~Lle~~gi~l~Gk~vvViGrS~~VGkPLA 245 (477)
|-+.+++.++|... | +-++|+.+++.++ |++ +++|.+. -++.+++++.|+++.|.|++ .| .+++.+-|+
T Consensus 262 ~~t~~~L~~ai~~~-~-~eisaS~~YA~AAl~aG~~FIN~sP~~~~~P~~~elae~~gvpI~GDD~K-SG-qT~lksvLa 337 (537)
T 1vko_A 262 NATADEIMESIRVN-E-DEVSPSNIFAVASILEGAHYINGSPQNTLVPGLIELAERHKVFVGGDDFK-SG-QTKFKSAFV 337 (537)
T ss_dssp TSSHHHHHHHHHTT-C-SSCCHHHHHHHHHHHTTCEEEECSSSCCCCHHHHHHHHHHTCCEECSCBC-CS-HHHHHHHHH
T ss_pred ccCHHHHHHHHhcC-C-ccCChHHHHHHHHHhcCCceeecCCcccCCHHHHHHHHHhCCceeccccc-cC-CchhHHHHH
Confidence 55788999999753 3 4599999988774 654 3444322 38999999999999999998 78 888999999
Q ss_pred HHhhhCCCCccccceEEccCCCCCChhHHHHHHHHHHHHHHHHhhhccCCCchhhHhhhcccccCCCCCCCCceeEEEee
Q psy4615 246 MLLHADGAGVSEVAGYITPVPGGVGPMTVAMLMKNTILAAKHAVIYNISKSNVVDDMVASNSILYRPGEKPDHTVVIKYV 325 (477)
Q Consensus 246 ~lL~~~~a~v~~~a~~iTPVpGGVGp~T~a~L~~N~l~a~~~~~sk~iSK~~v~~~~~~~~~~ly~~~~~~~h~v~I~Y~ 325 (477)
.||..||..+.+|.+ +++.|+-.. -++.++++++||++||++|+++|+++|++||+||+++||+|+|+||
T Consensus 338 ~~l~~RGlkv~~~~s--~NilGN~Dg--------~NL~~p~~~~SKeiSKs~vV~dil~~~~~lY~~G~~~dh~V~IdYV 407 (537)
T 1vko_A 338 DFLVSSGMKPESIVS--YNHLGNNDG--------KNLSEARQFRSKEISKSSVVDDMVKSNQILFPDAKNPDYCVVIKYV 407 (537)
T ss_dssp HHHHHTTCEEEEEEE--EEEECSHHH--------HHTTSHHHHHHHHHHHHTTTHHHHHHCTTTCTTCCCCEEEECCEEC
T ss_pred HHHHHcCCceeEEEE--EEeccCcch--------hhhCCHhhhhhhhhHHHHHHHHHhccCcccccCCCCCCCceEEeec
Confidence 999999999988888 787776654 3577889999999999999999999999999999999999999999
Q ss_pred cCCCCccccccccceeeeeccceeEEeecccccchhhhhHHHHHHHHHHHhhhhcccCCCccccccccchHHHHHhhhcC
Q psy4615 326 PYVGDSKRALDEYTSEILLGGHNTISMHNTCEDSLLASPLILDLIILAELSSRIQFTSPTVAEYTYFHPVLSILSYLCKA 405 (477)
Q Consensus 326 p~~Gd~K~a~d~~~~~~flG~~~~i~~~~~c~DSlLAaPLilDL~~l~~~~~r~~~~~~~~~~~~~~~~vl~~Ls~~fK~ 405 (477)
|++||+|+|||||++++|||++|+|+++|+|+||+|||||||||+||+++|+|+|++|+ ++|++||+|+++||||||+
T Consensus 408 P~lGD~K~A~d~~~~~~FlG~~~~I~i~~~~~DS~lAApliIDLvrlaklA~r~g~~g~--~~~~~~~~v~s~lSy~fKs 485 (537)
T 1vko_A 408 PYVADSKRAMDEYICSIFMGGKQTFVVHNTCEDSLLASPLIYDLAILTELASRVSYKVD--DEYKPFHSVLSILSLLLKA 485 (537)
T ss_dssp GGGTTEEEEEEEEEEECGGGCEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHTTEEEESS--SSEECCCSBCGGGGGGBSS
T ss_pred CCCCCcEEEEEEEEEeeecCCcEEEEEEEEEecchhhHHHHHHHHHHHHHHHhcccCCc--cccccccchhhHHHHHccC
Confidence 99999999999999999999999999999999999999999999999999999999985 8999999999999999999
Q ss_pred CCCCCCCchhchHHHHHHHHHHHHHHhcCCCCCCccccceecc
Q psy4615 406 PLVPPGTPVVNALAQQRSCIENILRACLSLPPENSMTLEHKLP 448 (477)
Q Consensus 406 P~~~~g~~~~~~l~~Q~~~l~~~~~~~~g~~~~~~~~~~~~~~ 448 (477)
|++++|++++|+|++||++|+||+|+|.|++|++||+||||+.
T Consensus 486 P~~~~g~~~~n~L~~Qr~~Lenfir~~~Gl~~~~~~~le~~~~ 528 (537)
T 1vko_A 486 PVVPPGTPISNAFMRQFSTLTKLVTALAGFPSDTDMQIEFFTQ 528 (537)
T ss_dssp CCCSTTSCCCCCHHHHHHHHHHHHHHHHTCCCCTTSCGGGTSC
T ss_pred CCCCCCCCCcchHHHHHHHHHHHHHHhcCCCccccccceeeee
Confidence 9999999999999999999999999999999999999999965
No 11
>1p1j_A Inositol-3-phosphate synthase; 1L-MYO-inositol 1-phosphate, NADH, isomerase, rossmann fold; HET: NAI; 1.70A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.3 PDB: 1jkf_A* 1la2_A* 1p1f_A 1jki_A* 1p1i_A* 1p1h_A* 1p1k_A* 1rm0_A*
Probab=100.00 E-value=6.9e-60 Score=495.80 Aligned_cols=261 Identities=36% Similarity=0.562 Sum_probs=237.7
Q ss_pred CCcHHHHHhhcCCCCCCCCCCccchHHhhc---CCC--CcccCCH--HHHHHHHHHhCCCCCCCeEEEECCCCCcchHHH
Q psy4615 173 HMVERAVCNAVAPHKDVDGFNIVNVGRFCL---DLK--TLIPCTP--LGVQELIRRYKVETFGKNAVVCGRSKNVGMPIA 245 (477)
Q Consensus 173 ~ld~~~l~~aI~p~KDVDGl~p~nlg~l~~---g~~--~f~PcTa--~Av~~Lle~~gi~l~Gk~vvViGrS~~VGkPLA 245 (477)
|-+.+++.++|... | +-++|+.+++.++ |++ +++|.+. -|+.+++++.|+++.|.|++ .| .+++.+-|+
T Consensus 258 ~~t~~~l~~ai~~~-~-~eispS~~YA~AAl~aG~~fIN~sP~~t~~P~~~elae~~gvpI~GDD~K-SG-qT~lksvLa 333 (533)
T 1p1j_A 258 NDTMENLLQSIKND-H-EEIAPSTIFAAASILEGVPYINGSPQNTFVPGLVQLAEHEGTFIAGDDLK-SG-QTKLKSVLA 333 (533)
T ss_dssp TSSHHHHHHHHHTT-C-TTCCHHHHHHHHHHHTTCCEEECSCSCCCCHHHHHHHHHHTCCEEESSBC-CS-HHHHHHHHH
T ss_pred ccCHHHHHHHHhcC-C-ccCChHHHHHHHHHhcCCceeecCCcccCCHHHHHHHHHhCCceeccccc-cC-CchhHHHHH
Confidence 55788999999753 3 4599999988874 665 3444322 38999999999999999998 78 888999999
Q ss_pred HHhhhCCCCccccceEEccCCCCCChhHHHHHHHHHHHHHHHHhhhccCCCchhhHhhhcccccCCC--CCCCCceeEEE
Q psy4615 246 MLLHADGAGVSEVAGYITPVPGGVGPMTVAMLMKNTILAAKHAVIYNISKSNVVDDMVASNSILYRP--GEKPDHTVVIK 323 (477)
Q Consensus 246 ~lL~~~~a~v~~~a~~iTPVpGGVGp~T~a~L~~N~l~a~~~~~sk~iSK~~v~~~~~~~~~~ly~~--~~~~~h~v~I~ 323 (477)
.||..||..+.+|++ +++.|+-.. -++.++++++||+|||++|+++|+++|++||++ |+++||+|+|+
T Consensus 334 ~~l~~RGlkv~~~~s--~N~lGN~Dg--------~NL~~p~~f~SKeiSKs~vV~dil~~~~~ly~~~~G~~~dh~V~Id 403 (533)
T 1p1j_A 334 QFLVDAGIKPVSIAS--YNHLGNNDG--------YNLSAPKQFRSKEISKSSVIDDIIASNDILYNDKLGKKVDHCIVIK 403 (533)
T ss_dssp HHHHHTTCEEEEEEE--EEEECSHHH--------HHHTSHHHHHHHHHHHHHTTHHHHHTCTTTSBTTTBCCCEEEEEEE
T ss_pred HHHHHcCCceeEEEE--EEeccCcch--------hhhCCHhhhhhhhhHHHHHHHHHHhccccccccccCCCCCCceEEe
Confidence 999999999888888 777776654 357888999999999999999999999999998 88999999999
Q ss_pred eecCCCCccccccccceeeeeccceeEEeecccccchhhhhHHHHHHHHHHHhhhhcccCC-----CccccccccchHHH
Q psy4615 324 YVPYVGDSKRALDEYTSEILLGGHNTISMHNTCEDSLLASPLILDLIILAELSSRIQFTSP-----TVAEYTYFHPVLSI 398 (477)
Q Consensus 324 Y~p~~Gd~K~a~d~~~~~~flG~~~~i~~~~~c~DSlLAaPLilDL~~l~~~~~r~~~~~~-----~~~~~~~~~~vl~~ 398 (477)
|||++||+|+|||||++++|||++|+|+++|+|+||+|||||||||+||+++|+|+|++|+ ++++|++||+|+++
T Consensus 404 YVP~lGD~K~A~d~~~~~~F~G~~~~I~i~~~c~DS~lAApliIDLvrla~la~r~g~~g~~~~~~~~~~~~~~~~v~s~ 483 (533)
T 1p1j_A 404 YMKPVGDSKVAMDEYYSELMLGGHNRISIHNVCEDSLLATPLIIDLLVMTEFCTRVSYKKVDPVKEDAGKFENFYPVLTF 483 (533)
T ss_dssp ECGGGTTEEEEEEEEEEECGGGCEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHTEEEEECBTTBTTCSCCBCCCSBCGG
T ss_pred ecCCCCCcEEEEEEEEEeeecCCcEEEEEEEEEecchhhHHHHHHHHHHHHHHHhcCcCCcccccccccccccccchHHH
Confidence 9999999999999999999999999999999999999999999999999999999999974 67899999999999
Q ss_pred HHhhhcCCCCCCCCchhchHHHHHHHHHHHHHHhcCCCCCCccccceec
Q psy4615 399 LSYLCKAPLVPPGTPVVNALAQQRSCIENILRACLSLPPENSMTLEHKL 447 (477)
Q Consensus 399 Ls~~fK~P~~~~g~~~~~~l~~Q~~~l~~~~~~~~g~~~~~~~~~~~~~ 447 (477)
||||||+|++++|.+++|+|++||++|+||+|+|.|++|++||+|||++
T Consensus 484 lSy~fKsP~~~~g~~~~n~L~~Qr~~lenfir~~~Gl~~~~~~~le~~~ 532 (533)
T 1p1j_A 484 LSYWLKAPLTRPGFHPVNGLNKQRTALENFLRLLIGLPSQNELRFEERL 532 (533)
T ss_dssp GGGGBSSCCCCTTCCCCCCHHHHHHHHHHHHHHHTTCCCCCCCCHHHHC
T ss_pred HHHHccCCCCCCCCcccChHHHHHHHHHHHHHHhcCCCccccccceeec
Confidence 9999999999999999999999999999999999999999999999985
No 12
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=100.00 E-value=4.2e-52 Score=420.89 Aligned_cols=212 Identities=24% Similarity=0.346 Sum_probs=195.4
Q ss_pred cccccccHHHHHHHHHHHHHHHHHHHHcCC-CCCEEEEEEeCCChhhHHHHHHHHHHHHHcCCeeeeeEEecCCcccHHh
Q psy4615 70 KAQIIDGKFIANTILEELKDEVKAWVALGH-RVPTLTAILVGNDSASSTYVNNKMKSAAKVGEVNALGVLYHLTLFGRSK 148 (477)
Q Consensus 70 ma~ILdGk~lA~~I~~~lk~~v~~lk~~~g-~~P~LaiI~vGdd~aS~~Yv~~k~k~a~~vGI~~~~~~~lp~~~~t~e~ 148 (477)
++++||||++|++|++++++++++++++++ ++|+|++|+||+||+|..|+++|.|+|+++||+++ .++||++. ...+
T Consensus 4 ~~~~idgk~ia~~i~~~~~~~v~~l~~~~~~~~P~Lavilvg~dpas~~Yv~~k~k~~~~~Gi~~~-~~~l~~~~-~l~~ 81 (320)
T 1edz_A 4 PGRTILASKVAETFNTEIINNVEEYKKTHNGQGPLLVGFLANNDPAAKMYATWTQKTSESMGFRYD-LRVIEDKD-FLEE 81 (320)
T ss_dssp CCEECCHHHHHHHHHHHHHHHHHHHHHHTTTCCCEEEEEECCCCHHHHHHHHHHHHHHHHHTCEEE-EEECSSGG-GHHH
T ss_pred CCEEeeHHHHHHHHHHHHHHHHHHHHHcCCCCCCeEEEEEECCchhHHHHHHHHHHHHHHcCCEEE-EEECCChH-HHHH
Confidence 478999999999999999999999998765 78999999999999999999999999999999999 99999763 2339
Q ss_pred hhccccCCCCCCccEEEEcCCCCCCCcHHHHHhhcCCCCCCCCCCccchHHhhcCC---------CCcccCCHHHHHHHH
Q psy4615 149 LINPMSIPISTGVSSHISQLPLPEHMVERAVCNAVAPHKDVDGFNIVNVGRFCLDL---------KTLIPCTPLGVQELI 219 (477)
Q Consensus 149 ~I~~L~~N~D~~V~GILVqlPLP~~ld~~~l~~aI~p~KDVDGl~p~nlg~l~~g~---------~~f~PcTa~Av~~Ll 219 (477)
.|++| |+|++|||||||+|||+|+|++.++++|+|+||||||||.|+|+|+.|. +.|+||||.|+++++
T Consensus 82 ~i~~l--N~d~~v~GIlvqlPlp~~~~~~~i~~~I~p~KDVDG~~~~n~g~l~~~~~~l~~~~~~~~~~PcTp~a~v~ll 159 (320)
T 1edz_A 82 AIIQA--NGDDSVNGIMVYFPVFGNAQDQYLQQVVCKEKDVEGLNHVYYQNLYHNVRYLDKENRLKSILPCTPLAIVKIL 159 (320)
T ss_dssp HHHHH--HHCTTCCEEEECSCSSSSHHHHHHTTTSCTTTBTTCCSHHHHHHHHTTCCBSSSSSCSBCCCCHHHHHHHHHH
T ss_pred HHHHH--cCCCCCCEEEEeCCCCCCCCHHHHHhccCcccccCcCChhhhHHHhcCCccccccccCCCcCCCcHHHHHHHH
Confidence 99999 9999999999999999999999999999999999999999999999883 589999999999999
Q ss_pred HH---------hCCCCCCCeEEEECCCCCcchHHHHHhhh---------CC--------------------------C--
Q psy4615 220 RR---------YKVETFGKNAVVCGRSKNVGMPIAMLLHA---------DG--------------------------A-- 253 (477)
Q Consensus 220 e~---------~gi~l~Gk~vvViGrS~~VGkPLA~lL~~---------~~--------------------------a-- 253 (477)
++ |++++.||+++|+|||.+||+|+|.+|.. |+ .
T Consensus 160 ~~~~~~~~~~~~g~~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~~~L 239 (320)
T 1edz_A 160 EFLKIYNNLLPEGNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLL 239 (320)
T ss_dssp HHTTCSCTTSCTTCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHH
T ss_pred HhhcccccccccCCCCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhcccccccccccHhHH
Confidence 99 89999999999999999999999999942 11 1
Q ss_pred -------------------------------------------CccccceEEccCCCCCChhHHHHHHHHHHHHHHHH
Q psy4615 254 -------------------------------------------GVSEVAGYITPVPGGVGPMTVAMLMKNTILAAKHA 288 (477)
Q Consensus 254 -------------------------------------------~v~~~a~~iTPVpGGVGp~T~a~L~~N~l~a~~~~ 288 (477)
++.++++||||| |||||++||++|++.+++++
T Consensus 240 ~e~l~~ADIVIsAtg~p~~vI~~e~vk~GavVIDVgi~rD~d~~v~~~a~~itPv---VGpmT~a~Ll~n~~~a~~~~ 314 (320)
T 1edz_A 240 KKCSLDSDVVITGVPSENYKFPTEYIKEGAVCINFACTKNFSDDVKEKASLYVPM---TGKVTIAMLLRNMLRLVRNV 314 (320)
T ss_dssp HHHHHHCSEEEECCCCTTCCBCTTTSCTTEEEEECSSSCCBCGGGGTTEEEEESC---CHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhccCCEEEECCCCCcceeCHHHcCCCeEEEEcCCCcccchhHHhhCCeeCCC---ccHHHHHHHHHHHHHHHHHh
Confidence 466789999998 99999999999999998753
No 13
>3qvs_A MIPS, MYO-inositol-1-phosphate synthase (INO1); NAD binding rossmann fold, L-MYO-inositol 1-phosphate syntha isomerase; HET: NAD PG4; 1.70A {Archaeoglobus fulgidus} PDB: 1u1i_A* 3qvt_A* 3qvw_A* 3qvx_A* 3qw2_A*
Probab=100.00 E-value=8.7e-47 Score=387.96 Aligned_cols=221 Identities=18% Similarity=0.243 Sum_probs=196.8
Q ss_pred CcHHHHHhhcCCCCCCCCC-CccchHHhh---cCCC--CcccCC-H--HHHHHHHHHhCCCCCCCeEEEECCCCCcchHH
Q psy4615 174 MVERAVCNAVAPHKDVDGF-NIVNVGRFC---LDLK--TLIPCT-P--LGVQELIRRYKVETFGKNAVVCGRSKNVGMPI 244 (477)
Q Consensus 174 ld~~~l~~aI~p~KDVDGl-~p~nlg~l~---~g~~--~f~PcT-a--~Av~~Lle~~gi~l~Gk~vvViGrS~~VGkPL 244 (477)
-+.+++.++|.... .-+ +|+.+++.+ .|++ +++|.+ + -+..+++++.|+++.|.|.+ +| .+++.+-|
T Consensus 162 ~t~~~l~~ai~~~~--~ei~spS~~YA~AAl~ag~~fvN~~P~~~a~~P~~~ela~~~g~pi~GdD~K-sG-qT~~ks~L 237 (392)
T 3qvs_A 162 GSLEGFERMIDEDR--KEYASASMLYAYAALKLGLPYANFTPSPGSAIPALKELAEKKGVPHAGNDGK-TG-ETLVKTTL 237 (392)
T ss_dssp SSHHHHHHHHHTTC--GGGCCHHHHHHHHHHHTTCCEEECSSSCTTCSHHHHHHHHHHTCEEECSSBC-CS-HHHHHHHH
T ss_pred cCHHHHHHHHhcCC--ccccChHHHHHHHHHHcCCCeeecCCccccCCHHHHHHHHHcCCCEecCccc-CC-CchHHHHH
Confidence 46788999997543 337 899988877 3776 566763 3 38999999999999999999 78 78899999
Q ss_pred HHHhhhCCCCccccceEEccCCCCCChhHHHHHHHHHHHHHHHHhhhccCCCchhhHhhhcccccCCCCCCCCceeEEEe
Q psy4615 245 AMLLHADGAGVSEVAGYITPVPGGVGPMTVAMLMKNTILAAKHAVIYNISKSNVVDDMVASNSILYRPGEKPDHTVVIKY 324 (477)
Q Consensus 245 A~lL~~~~a~v~~~a~~iTPVpGGVGp~T~a~L~~N~l~a~~~~~sk~iSK~~v~~~~~~~~~~ly~~~~~~~h~v~I~Y 324 (477)
+.+|..||..+.+|.+ +++.|+-.- -++.++++++||++||++|+++|++ |. ++|+|+|+|
T Consensus 238 a~~l~~Rglkv~~~~q--~N~lGN~Dg--------~nL~~~~~~~SK~iSKs~vv~~~lg-----~~----~~~~v~I~Y 298 (392)
T 3qvs_A 238 APMFAYRNMEVVGWMS--YNILGDYDG--------KVLSARDNKESKVLSKDKVLEKMLG-----YS----PYSITEIQY 298 (392)
T ss_dssp HHHHHHTTCEEEEEEE--EEEECHHHH--------HHTTSHHHHHHHHHHHHTHHHHHHS-----SC----CEEEEEEEE
T ss_pred HHHHHHcCCceeEEEE--Eeccccchh--------hhhCCHhHhhhhhhHHHHHHHHHhC-----CC----CCCceEEee
Confidence 9999999999888887 776655443 2578889999999999999999998 76 899999999
Q ss_pred ecCCCCccccccccceeeeeccceeEEeecccccchhhhhHHHHHHHHHHHhhhhcccCCCccccccccchHHHHHhhhc
Q psy4615 325 VPYVGDSKRALDEYTSEILLGGHNTISMHNTCEDSLLASPLILDLIILAELSSRIQFTSPTVAEYTYFHPVLSILSYLCK 404 (477)
Q Consensus 325 ~p~~Gd~K~a~d~~~~~~flG~~~~i~~~~~c~DSlLAaPLilDL~~l~~~~~r~~~~~~~~~~~~~~~~vl~~Ls~~fK 404 (477)
||++||+|+|||||++++|||++|+|+++|+|+||+|||||||||+|++++|+|+|+.| ++++||||||
T Consensus 299 vp~lGD~K~a~d~i~~~~F~G~~~~i~~~~~~~DS~laAplviDlvrl~~la~~~g~~G-----------~l~~ls~~~K 367 (392)
T 3qvs_A 299 FPSLVDNKTAFDFVHFKGFLGKLMKFYFIWDAIDAIVAAPLILDIARFLLFAKKKGVKG-----------VVKEMAFFFK 367 (392)
T ss_dssp CGGGTTCCEEEEEEEEECGGGCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHTTCCE-----------ECGGGGGGBS
T ss_pred cCCCCCceEEEEEEEeeeeCCCcEEEEEEEEEecchhhHHHHHHHHHHHHHHHhcCCCC-----------chHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999998 9999999999
Q ss_pred CCCCCCCCchhchHHHHHHHHHHHHHHh
Q psy4615 405 APLVPPGTPVVNALAQQRSCIENILRAC 432 (477)
Q Consensus 405 ~P~~~~g~~~~~~l~~Q~~~l~~~~~~~ 432 (477)
+|+++ .+|+|++||++|+||+|++
T Consensus 368 ~P~~~----~~~~l~~q~~~l~~~~r~~ 391 (392)
T 3qvs_A 368 SPMDT----NVINTHEQFVVLKEWYSNL 391 (392)
T ss_dssp SCTTC----CCCCHHHHHHHHHHHHHHH
T ss_pred CCCCC----CCCcHHHHHHHHHHHHHhc
Confidence 99965 4699999999999999986
No 14
>1vjp_A MYO-inositol-1-phosphate synthase-related protein; TM1419, structural genomics, JCSG, PSI, protein structure initiative; HET: NAD; 1.70A {Thermotoga maritima} PDB: 3cin_A*
Probab=100.00 E-value=5.8e-43 Score=358.41 Aligned_cols=240 Identities=15% Similarity=0.170 Sum_probs=201.1
Q ss_pred CccEEEEcC---CCCCCCcHHHHHhhcCCCCCCCCCCccchHHhh--------cCCC--CcccCCH---HHHHHHHHHhC
Q psy4615 160 GVSSHISQL---PLPEHMVERAVCNAVAPHKDVDGFNIVNVGRFC--------LDLK--TLIPCTP---LGVQELIRRYK 223 (477)
Q Consensus 160 ~V~GILVql---PLP~~ld~~~l~~aI~p~KDVDGl~p~nlg~l~--------~g~~--~f~PcTa---~Av~~Lle~~g 223 (477)
++|=++... |.++.-+++++.++|.-... +-++|+.+++.+ .|++ +++|.+- -|+.+++++.|
T Consensus 135 ~~DVvIn~~STE~~~p~gs~~~l~~ai~~~~~-~~i~aS~~YA~AAl~~~~~~aG~~fVN~~P~~ia~~P~~~ela~~~g 213 (394)
T 1vjp_A 135 DPDVIVNTCTTEAFVPFGNKEDLLKAIENNDK-ERLTATQVYAYAAALYANKRGGAAFVNVIPTFIANDPAFVELAKENN 213 (394)
T ss_dssp CCSEEEECCCCCCCCCCSSHHHHHHHHHTTCT-TTCCHHHHHHHHHHHHHHHHTCEEEEECSSSCSTTCHHHHHHHHHTT
T ss_pred CCCEEEEecCccCCCCCCCHHHHHHHHhcCCC-CccChHHHHHHHHHhhccccCCcceEecCCccccCCHHHHHHHHHcC
Confidence 455555555 22223477888889875432 458899988766 3444 5677643 48999999999
Q ss_pred CCCCCCeEEEECCCCCcchHHHHHhhhCCCCccccceEEccCCCCCChhHHHHHHHHHHHHHHHHhhhccCCCchhhHhh
Q psy4615 224 VETFGKNAVVCGRSKNVGMPIAMLLHADGAGVSEVAGYITPVPGGVGPMTVAMLMKNTILAAKHAVIYNISKSNVVDDMV 303 (477)
Q Consensus 224 i~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v~~~a~~iTPVpGGVGp~T~a~L~~N~l~a~~~~~sk~iSK~~v~~~~~ 303 (477)
+++.|.|.. +| .+++.+-|+.||..||..+.+|++ +++.|+-.-. ++.++++++||++||++++++|+
T Consensus 214 vpi~GDD~k-tG-qT~lks~La~~l~~Rglkv~~~~q--~NilGN~Dg~--------nL~~p~~~~SKeiSKs~vv~d~l 281 (394)
T 1vjp_A 214 LVVFGDDGA-TG-ATPFTADVLSHLAQRNRYVKDVAQ--FNIGGNMDFL--------ALTDDGKNKSKEFTKSSIVKDIL 281 (394)
T ss_dssp EEEECSSBS-CS-HHHHHHHHHHHHHHTTCEEEEEEE--EEEECCGGGG--------SSCHHHHHHHHHHHSCCHHHHHH
T ss_pred CCEEccccC-CC-CCchHHHHHHHHHHcCCceeEEEE--Eeccccchhh--------hhCCHhHhhhhhhHHHHHHHHHh
Confidence 999999977 88 788999999999999999988888 8888877753 47788999999999999999999
Q ss_pred hcccccCCCCCCCCceeEEEeecCCCCccccccccceeeeeccceeEEeecccccchhhhhHHHHHHHHHHHhhhhcccC
Q psy4615 304 ASNSILYRPGEKPDHTVVIKYVPYVGDSKRALDEYTSEILLGGHNTISMHNTCEDSLLASPLILDLIILAELSSRIQFTS 383 (477)
Q Consensus 304 ~~~~~ly~~~~~~~h~v~I~Y~p~~Gd~K~a~d~~~~~~flG~~~~i~~~~~c~DSlLAaPLilDL~~l~~~~~r~~~~~ 383 (477)
+ |. .++|+++|+|||++||+|+|||+|++++|||++|+|+++|+|+||+|||||||||+||+++|+|+|..|
T Consensus 282 ~-----~~---~~~hi~~i~Yvp~lGD~K~A~d~ie~~~FlG~~~~i~~~~~~~DS~lAAplviDlvrla~la~~~g~~G 353 (394)
T 1vjp_A 282 G-----YD---APHYIKPTGYLEPLGDKKFIAIHIEYVSFNGATDELMINGRINDSPALGGLLVDLVRLGKIALDRKEFG 353 (394)
T ss_dssp S-----SC---CCEECCCCEECGGGTTEEEEEEEEEEECGGGCEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHTTCCE
T ss_pred c-----CC---CCccccccccCCcCCCceEEEEEEEeeecCCCcEEEEEEEEEecchhhHHHHHHHHHHHHHHHHhcCCC
Confidence 9 55 578999999999999999999999999999999999999999999999999999999999999998866
Q ss_pred CCccccccccchHHHHHhhhcCCCCCCCCchhchHHHHHHHHHHHHHHh
Q psy4615 384 PTVAEYTYFHPVLSILSYLCKAPLVPPGTPVVNALAQQRSCIENILRAC 432 (477)
Q Consensus 384 ~~~~~~~~~~~vl~~Ls~~fK~P~~~~g~~~~~~l~~Q~~~l~~~~~~~ 432 (477)
++.+++|||||+|+ |. .....++.+|+++|++|++.+
T Consensus 354 ----------~v~~~~sy~~K~P~-P~-~~~~~~~~~a~~~l~~f~~~~ 390 (394)
T 1vjp_A 354 ----------TVYPVNAFYMKNPG-PA-EEKNIPRIIAYEKMRIWAGLK 390 (394)
T ss_dssp ----------ECHHHHHHHBSSCS-ST-TCCCCCHHHHHHHHHHHTTCC
T ss_pred ----------cchHHHHHHccCCC-CC-CCCCchHHHHHHHHHHHHhhc
Confidence 67777799999994 22 344568999999999998754
No 15
>3cin_A MYO-inositol-1-phosphate synthase-related protein; structura genomics, joint center for structural genomics, JCSG; HET: NAD; 1.70A {Thermotoga maritima MSB8}
Probab=100.00 E-value=1.2e-41 Score=352.17 Aligned_cols=232 Identities=17% Similarity=0.237 Sum_probs=196.4
Q ss_pred CCCCCCcHHHHHhhcCCCCCCCCCCccchHHhhc--------CCC--CcccCCH---HHHHHHHHHhCCCCCCCeEEEEC
Q psy4615 169 PLPEHMVERAVCNAVAPHKDVDGFNIVNVGRFCL--------DLK--TLIPCTP---LGVQELIRRYKVETFGKNAVVCG 235 (477)
Q Consensus 169 PLP~~ld~~~l~~aI~p~KDVDGl~p~nlg~l~~--------g~~--~f~PcTa---~Av~~Lle~~gi~l~Gk~vvViG 235 (477)
++|- -+++.+.+++.. .|-+.++|+.+++.++ |++ +++|..- -|+.+++++.|+++.|+|.. +|
T Consensus 148 ylpv-gs~~~~~~a~~~-~~~~~i~as~~YA~AAl~~aa~~aG~~fvN~~P~~ia~~P~~~ela~~~gvpi~GdD~k-tG 224 (394)
T 3cin_A 148 FVPF-GNKEDLLKAIEN-NDKERLTATQVYAYAAALYANKRGGAAFVNVIPTFIANDPAFVELAKENNLVVFGDDGA-TG 224 (394)
T ss_dssp CCCC-SSHHHHHHHHHT-TCTTTCCHHHHHHHHHHHHHHHHTCEEEEECSSSCSTTCHHHHHHHHHTTEEEECSSBS-CS
T ss_pred CCCC-CCHHHHHHHhhc-cccccCChhHHHHHHHHHhhhhhcCCceecCCCccccCcHHHHHHHHHcCCcEeccccc-cc
Confidence 3443 356677777753 3445688888887553 554 4566533 38999999999999999977 78
Q ss_pred CCCCcchHHHHHhhhCCCCccccceEEccCCCCCChhHHHHHHHHHHHHHHHHhhhccCCCchhhHhhhcccccCCCCCC
Q psy4615 236 RSKNVGMPIAMLLHADGAGVSEVAGYITPVPGGVGPMTVAMLMKNTILAAKHAVIYNISKSNVVDDMVASNSILYRPGEK 315 (477)
Q Consensus 236 rS~~VGkPLA~lL~~~~a~v~~~a~~iTPVpGGVGp~T~a~L~~N~l~a~~~~~sk~iSK~~v~~~~~~~~~~ly~~~~~ 315 (477)
.+++.+-|+.+|..|+..+..|.+ +++-|+-.-. ++..+++++||++||++++++|++ |+ .
T Consensus 225 -~T~~k~~L~~~l~~rgl~v~~~~q--~N~lGN~Dg~--------nl~~~~~~~sK~~SK~~vv~~~l~-----~~---~ 285 (394)
T 3cin_A 225 -ATPFTADVLSHLAQRNRYVKDVAQ--FNIGGNMDFL--------ALTDDGKNKSKEFTKSSIVKDILG-----YD---A 285 (394)
T ss_dssp -HHHHHHHHHHHHHHTTCEEEEEEE--EEEECCGGGG--------SSCHHHHHHHHHHHSCCHHHHHHS-----SC---C
T ss_pred -chhHHHHHHHHHHHCCCeEeEEEE--Eeecccchhh--------HhCCHhhhhhHHHHHHHHHHHHhh-----cc---c
Confidence 778899999999999999888877 8888887752 467889999999999999999999 65 6
Q ss_pred CCceeEEEeecCCCCccccccccceeeeeccceeEEeecccccchhhhhHHHHHHHHHHHhhhhcccCCCccccccccch
Q psy4615 316 PDHTVVIKYVPYVGDSKRALDEYTSEILLGGHNTISMHNTCEDSLLASPLILDLIILAELSSRIQFTSPTVAEYTYFHPV 395 (477)
Q Consensus 316 ~~h~v~I~Y~p~~Gd~K~a~d~~~~~~flG~~~~i~~~~~c~DSlLAaPLilDL~~l~~~~~r~~~~~~~~~~~~~~~~v 395 (477)
++|+++|+|||++||+|+|||+|++++|||++|+|+++|+|+||+|||||||||+|++++|+|+|..| ++
T Consensus 286 ~~h~~~~~Yvp~lgD~K~a~~~ie~~~f~g~~~~i~~~~~~~DS~laAplviDlir~~~la~~~g~~g----------~v 355 (394)
T 3cin_A 286 PHYIKPTGYLEPLGDKKFIAIHIEYVSFNGATDELMINGRINDSPALGGLLVDLVRLGKIALDRKEFG----------TV 355 (394)
T ss_dssp CEECCCCEECGGGTTEEEEEEEEEEECGGGCEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHTTCCE----------EC
T ss_pred cccccccCCCCcCCCCeEEEEEEEEEEecCcceEEEEEeEEechhhhHHHHHHHHHHHHHHHHhcCCC----------cc
Confidence 89999999999999999999999999999999999999999999999999999999999999988765 68
Q ss_pred HHHHHhhhcCCCCCCCCchhchHHHHHHHHHHHHHHhcCCCCC
Q psy4615 396 LSILSYLCKAPLVPPGTPVVNALAQQRSCIENILRACLSLPPE 438 (477)
Q Consensus 396 l~~Ls~~fK~P~~~~g~~~~~~l~~Q~~~l~~~~~~~~g~~~~ 438 (477)
++++|||||+|+++.+..+.+.+++| ++|+|+|++|+
T Consensus 356 ~~~~s~~~K~P~~~~~~~~~~~~~~~------~lr~~~g~~p~ 392 (394)
T 3cin_A 356 YPVNAFYMKNPGPAEEKNIPRIIAYE------KMRIWAGLKPK 392 (394)
T ss_dssp HHHHHHHBSSCSSTTCCCCCHHHHHH------HHHHHTTCCCC
T ss_pred hhHHHHHcCCCCCCCCCcHHHHHHHH------HHHHHcCCCcc
Confidence 99999999999977776655554444 59999999996
No 16
>1gr0_A Inositol-3-phosphate synthase; isomerase, oxidoreductase, PSI, protein structure initiative, TB structural genomics consortium, TB; HET: NAD; 1.95A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3
Probab=100.00 E-value=7.6e-39 Score=326.84 Aligned_cols=203 Identities=17% Similarity=0.160 Sum_probs=150.2
Q ss_pred CccchHHhh---cCCC--CcccC-CH--HHHHHHHHHhCCCCCCCeEE-EECCCCCcchHHHHHhhhCCCCccccceEEc
Q psy4615 193 NIVNVGRFC---LDLK--TLIPC-TP--LGVQELIRRYKVETFGKNAV-VCGRSKNVGMPIAMLLHADGAGVSEVAGYIT 263 (477)
Q Consensus 193 ~p~nlg~l~---~g~~--~f~Pc-Ta--~Av~~Lle~~gi~l~Gk~vv-ViGrS~~VGkPLA~lL~~~~a~v~~~a~~iT 263 (477)
.|+.+++.+ .|++ +++|. |+ -+..+++++.|+++.|.|++ =+| .+++.+-|+.||..||..+..|.+ +
T Consensus 152 ~aS~~YA~Aal~ag~~fvN~~P~~~~~~P~~~el~~~~g~pi~GdD~Ksq~G-~T~~k~~La~~l~~rg~kv~~~~q--~ 228 (367)
T 1gr0_A 152 EADKFYAQCAIDAGVAFVNALPVFIASDPVWAKKFTDARVPIVGDDIKSQVG-ATITHRVLAKLFEDRGVQLDRTMQ--L 228 (367)
T ss_dssp HHHHHHHHHHHHHTCEEEECSSCCSTTSHHHHHHHHHHTCEEEESSBCCSSC-HHHHHHHHHHHHHHTTCEEEEEEE--E
T ss_pred CHHHHHHHHHHHcCCceEecCCccccCCHHHHHHHHHcCCCEeccccccccC-CChHHHHHHHHHHHcCCceeEEEE--E
Confidence 366666665 3665 46664 33 38999999999999999964 145 677899999999999999888888 7
Q ss_pred cCCCCCChhHHHHHHHHHHHHHHHHhhhccCCCchhhHhhhcccccCCCCCCCCceeEE---EeecCCCCccccccccce
Q psy4615 264 PVPGGVGPMTVAMLMKNTILAAKHAVIYNISKSNVVDDMVASNSILYRPGEKPDHTVVI---KYVPYVGDSKRALDEYTS 340 (477)
Q Consensus 264 PVpGGVGp~T~a~L~~N~l~a~~~~~sk~iSK~~v~~~~~~~~~~ly~~~~~~~h~v~I---~Y~p~~Gd~K~a~d~~~~ 340 (477)
++-|+-.- -++.++++++||++||++++++|++ |. .+||+|+| +|||++||+|+|||+|++
T Consensus 229 N~lGN~D~--------~nL~~~~~~~sK~iSKs~vv~~~l~-----~~---~~d~~v~Igps~Yvp~lgD~K~a~d~i~~ 292 (367)
T 1gr0_A 229 NVGGNMDF--------LNMLERERLESKKISKTQAVTSNLK-----RE---FKTKDVHIGPSDHVGWLDDRKWAYVRLEG 292 (367)
T ss_dssp EEECSHHH--------HHHHC----------------------------------CEECSEEEECGGGTTEEEEEEEEEE
T ss_pred eccCchhh--------hhhCChhhhhhhhhHHHHHHHHHhc-----cC---CCCCcEEECccccCCcCCCceEEEEEEEe
Confidence 77766553 3578889999999999999999999 54 36899999 999999999999999999
Q ss_pred eeeeccceeEEeecccccchhhhhHHHHHHHHHHHhhhhcccCCCccccccccchHHHHHhhhcCCCCCCCCchhchHHH
Q psy4615 341 EILLGGHNTISMHNTCEDSLLASPLILDLIILAELSSRIQFTSPTVAEYTYFHPVLSILSYLCKAPLVPPGTPVVNALAQ 420 (477)
Q Consensus 341 ~~flG~~~~i~~~~~c~DSlLAaPLilDL~~l~~~~~r~~~~~~~~~~~~~~~~vl~~Ls~~fK~P~~~~g~~~~~~l~~ 420 (477)
++|||++|+|+++|+|+||+|||||||||+|++++|+|+|++| ++.+.+|||||+|++..+ .-+
T Consensus 293 ~~F~G~~~~i~~~~~~~DS~laAplviDlvrl~~la~~~g~~G----------~v~~~ssy~~K~P~~~~~------~~~ 356 (367)
T 1gr0_A 293 RAFGDVPLNLEYKLEVWDSPNSAGVIIDAVRAAKIAKDRGIGG----------PVIPASAYLMKSPPEQLP------DDI 356 (367)
T ss_dssp EEGGGEEEEEEEEEEEETTHHHHHHHHHHHHHHHHHHHTTCCE----------ECHHHHHHHBSSCSSCCC------HHH
T ss_pred eecCCCcEEEEEEEEEecchhhHHHHHHHHHHHHHHHhcCCCc----------chhHHHHHHccCCCCCCC------HHH
Confidence 9999999999999999999999999999999999999999998 456666799999997643 358
Q ss_pred HHHHHHHHHH
Q psy4615 421 QRSCIENILR 430 (477)
Q Consensus 421 Q~~~l~~~~~ 430 (477)
+++++++|++
T Consensus 357 a~~~~~~fi~ 366 (367)
T 1gr0_A 357 ARAQLEEFII 366 (367)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhc
Confidence 8999999987
No 17
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=98.53 E-value=3.3e-08 Score=97.13 Aligned_cols=126 Identities=15% Similarity=0.176 Sum_probs=97.4
Q ss_pred eCCChhhHHHHHHH-HHHHHHcCCeeeeeEEecCCcccHH--hhhccccCCCCCCccEEEEcCCCCCCC----c---H-H
Q psy4615 109 VGNDSASSTYVNNK-MKSAAKVGEVNALGVLYHLTLFGRS--KLINPMSIPISTGVSSHISQLPLPEHM----V---E-R 177 (477)
Q Consensus 109 vGdd~aS~~Yv~~k-~k~a~~vGI~~~~~~~lp~~~~t~e--~~I~~L~~N~D~~V~GILVqlPLP~~l----d---~-~ 177 (477)
+| +|.+++|...+ .++|+++|+++. ...++-.. ++ +.|+.+ +++ +++|+.|++|+++++ | + .
T Consensus 17 iG-~pi~hS~Sp~~h~~~~~~~gi~~~-y~~~~~~~--~~l~~~i~~l--~~~-~~~G~nVtiP~k~~i~~~~d~~~~~a 89 (287)
T 1nvt_A 17 IG-HPVEHSFSPIMHNAAFKDKGLNYV-YVAFDVLP--ENLKYVIDGA--KAL-GIVGFNVTIPHKIEIMKYLDEIDKDA 89 (287)
T ss_dssp EE-SSCTTCSHHHHHHHHHHHTTCCEE-EEEEECCG--GGGGGHHHHH--HHH-TCCEEEECTTSTTGGGGGCSEECHHH
T ss_pred EC-CCcccccCHHHHHHHHHHcCCCcE-EEEEEcCH--HHHHHHHHHH--HhC-CCCEEEEccCCHHHHHHHHHhcCHHH
Confidence 45 77888888877 889999999998 77774332 22 778888 754 899999999999887 3 2 3
Q ss_pred HHHhhcCCCCCCCCCCccchHHhhcCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 178 AVCNAVAPHKDVDGFNIVNVGRFCLDLKTLIPCTPLGVQELIRRYKVETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 178 ~l~~aI~p~KDVDGl~p~nlg~l~~g~~~f~PcTa~Av~~Lle~~gi~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
+...++++.++.| |++. |.. .++.|+++.|+++++++.||+++|+|.+ -+|++++..|+.++ .|
T Consensus 90 ~~igavnt~~~~~-------g~l~-g~n----Td~~G~~~~L~~~~~~l~~k~vlV~GaG-giG~aia~~L~~~G-~V 153 (287)
T 1nvt_A 90 QLIGAVNTIKIED-------GKAI-GYN----TDGIGARMALEEEIGRVKDKNIVIYGAG-GAARAVAFELAKDN-NI 153 (287)
T ss_dssp HHHTCCCEEEEET-------TEEE-EEC----CHHHHHHHHHHHHHCCCCSCEEEEECCS-HHHHHHHHHHTSSS-EE
T ss_pred HHhCceeeEEeeC-------CEEE-Eec----CCHHHHHHHHHHhCCCcCCCEEEEECch-HHHHHHHHHHHHCC-CE
Confidence 4555555555433 3443 311 2889999999999999999999999988 88999999999887 54
No 18
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=98.46 E-value=2.7e-08 Score=97.12 Aligned_cols=132 Identities=12% Similarity=0.077 Sum_probs=101.1
Q ss_pred ChhhHHHHH-HHHHHHHHcCCeeeeeEEecCCcccHHhhhccccCCCCCCccEEEEcCCCCCCCcHHHHHhhcCCC-CCC
Q psy4615 112 DSASSTYVN-NKMKSAAKVGEVNALGVLYHLTLFGRSKLINPMSIPISTGVSSHISQLPLPEHMVERAVCNAVAPH-KDV 189 (477)
Q Consensus 112 d~aS~~Yv~-~k~k~a~~vGI~~~~~~~lp~~~~t~e~~I~~L~~N~D~~V~GILVqlPLP~~ld~~~l~~aI~p~-KDV 189 (477)
+|-+++|.- ...++|+++|+++. ...++-..+..++.|+.+ + +++++|+.|++|++.++ -.+++.++|. |++
T Consensus 9 ~pi~hS~Sp~~h~~~~~~~g~~~~-y~~~~~~~~~l~~~i~~l--~-~~~~~G~nVT~P~K~~~--~~~ld~~~~~A~~i 82 (271)
T 1nyt_A 9 NPIAHSKSPFIHQQFAQQLNIEHP-YGRVLAPINDFINTLNAF--F-SAGGKGANVTVPFKEEA--FARADELTERAALA 82 (271)
T ss_dssp SSCTTCSHHHHHHHHHHHHTCCCC-EEEEECCTTCHHHHHHHH--H-HTTCCEEEECTTCHHHH--HHHCSEECHHHHHH
T ss_pred CCcccccCHHHHHHHHHHCCCCcE-EEEEEcCHHHHHHHHHHH--H-hCCCCeEEEccCCHHHH--HHHHhhcCHHHHHh
Confidence 566666654 67889999999988 777753321122778888 7 77899999999998775 3456667777 788
Q ss_pred CCCCcc---chHHhhcCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 190 DGFNIV---NVGRFCLDLKTLIPCTPLGVQELIRRYKVETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 190 DGl~p~---nlg~l~~g~~~f~PcTa~Av~~Lle~~gi~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
+++++. +-|++. |. -+.+.|+++.|+++++++.||+++|+|.+ -+|++++..|+..++.|
T Consensus 83 gavNti~~~~~g~l~-G~----ntD~~G~~~~L~~~~~~l~~k~vlViGaG-g~g~a~a~~L~~~G~~V 145 (271)
T 1nyt_A 83 GAVNTLMRLEDGRLL-GD----NTDGVGLLSDLERLSFIRPGLRILLIGAG-GASRGVLLPLLSLDCAV 145 (271)
T ss_dssp TCCSEEEECTTSCEE-EE----CCHHHHHHHHHHHHTCCCTTCEEEEECCS-HHHHHHHHHHHHTTCEE
T ss_pred CCceEEEEcCCCeEE-Ee----CCCHHHHHHHHHhcCcCcCCCEEEEECCc-HHHHHHHHHHHHcCCEE
Confidence 888875 445553 22 25689999999999999999999999976 58999999999988643
No 19
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=98.36 E-value=7.5e-08 Score=93.02 Aligned_cols=130 Identities=18% Similarity=0.183 Sum_probs=100.2
Q ss_pred eCCChhhHHHH-HHHHHHHHHcCCeeeeeEEecCCcccHHhhhccccCCCCCCccEEEEcCCCCCCCcHHHHHhhcCC-C
Q psy4615 109 VGNDSASSTYV-NNKMKSAAKVGEVNALGVLYHLTLFGRSKLINPMSIPISTGVSSHISQLPLPEHMVERAVCNAVAP-H 186 (477)
Q Consensus 109 vGdd~aS~~Yv-~~k~k~a~~vGI~~~~~~~lp~~~~t~e~~I~~L~~N~D~~V~GILVqlPLP~~ld~~~l~~aI~p-~ 186 (477)
+| +|.+++|. ....++|+++|+++. ...++-..+...+.++.+ +.+ ++|+.|+.|+++++ ...++.+++ .
T Consensus 7 ~G-~pi~hs~sp~~h~~~~~~~g~~~~-y~~~~~~~~~l~~~i~~l--~~~--~~G~~vt~P~k~~i--~~~~~~l~~~a 78 (263)
T 2d5c_A 7 LG-HPVAHSLSPAMHAFALESLGLEGS-YEAWDTPLEALPGRLKEV--RRA--FRGVNLTLPLKEAA--LAHLDWVSPEA 78 (263)
T ss_dssp EE-SSCTTCSHHHHHHHHHHHTTCCEE-EEEEECCGGGHHHHHHHH--HHH--CSEEEECTTCTTGG--GGGCSEECHHH
T ss_pred EC-CCcccccCHHHHHHHHHHcCCCCE-EEEEeCCHHHHHHHHHhc--ccc--CceEEEcccCHHHH--HHHHHHHhHHH
Confidence 45 67777777 788899999999998 766633220112788888 766 99999999999887 345566777 7
Q ss_pred CCCCCCCcc--chHHhhcCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEECCCCCcchHHHHHhhhCCC
Q psy4615 187 KDVDGFNIV--NVGRFCLDLKTLIPCTPLGVQELIRRYKVETFGKNAVVCGRSKNVGMPIAMLLHADGA 253 (477)
Q Consensus 187 KDVDGl~p~--nlg~l~~g~~~f~PcTa~Av~~Lle~~gi~l~Gk~vvViGrS~~VGkPLA~lL~~~~a 253 (477)
|+++|+++. +.|++...+. ...|++..|+++++++.| ++.|+|.+. +|++++..|...+.
T Consensus 79 ~~~gavn~i~~~~g~~~g~nt-----d~~g~~~~l~~~~~~l~~-~v~iiG~G~-~g~~~a~~l~~~g~ 140 (263)
T 2d5c_A 79 QRIGAVNTVLQVEGRLFGFNT-----DAPGFLEALKAGGIPLKG-PALVLGAGG-AGRAVAFALREAGL 140 (263)
T ss_dssp HHHTCCCEEEEETTEEEEECC-----HHHHHHHHHHHTTCCCCS-CEEEECCSH-HHHHHHHHHHHTTC
T ss_pred HHhCCCCcEEccCCeEEEeCC-----CHHHHHHHHHHhCCCCCC-eEEEECCcH-HHHHHHHHHHHCCC
Confidence 899999987 6676542222 136999999999999999 999999765 89999999988875
No 20
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=98.17 E-value=3.7e-07 Score=89.24 Aligned_cols=134 Identities=14% Similarity=0.153 Sum_probs=100.5
Q ss_pred EEeCCChhhHHHHHHHH-HHHHHcCCeeeeeEEecCCcccHHhhhccccCCCCCCccEEEEcCCCCCCCcHHHHHhhcCC
Q psy4615 107 ILVGNDSASSTYVNNKM-KSAAKVGEVNALGVLYHLTLFGRSKLINPMSIPISTGVSSHISQLPLPEHMVERAVCNAVAP 185 (477)
Q Consensus 107 I~vGdd~aS~~Yv~~k~-k~a~~vGI~~~~~~~lp~~~~t~e~~I~~L~~N~D~~V~GILVqlPLP~~ld~~~l~~aI~p 185 (477)
-++| +|.+++|...+. ++|+++|+++. ...++-..+...+.++.+ + +++++|+.|+.|+++++- .+++.+++
T Consensus 16 ~liG-~pi~hs~sp~~h~~~~~~~g~~~~-y~~~~~~~~~l~~~i~~l--~-~~~~~G~nvtiP~k~~i~--~~ld~l~~ 88 (275)
T 2hk9_A 16 GVIG-FPVKHSLSPVFQNALIRYAGLNAV-YLAFEINPEELKKAFEGF--K-ALKVKGINVTVPFKEEII--PLLDYVED 88 (275)
T ss_dssp EEEE-SSCTTCSHHHHHHHHHHHHTCSEE-EEEEECCGGGHHHHHHHH--H-HHTCCEEEECTTSTTTTG--GGCSEECH
T ss_pred EEEC-CCcccccCHHHHHHHHHHcCCCcE-EEEEECCHHHHHHHHHHH--H-hCCCCEEEECccCHHHHH--HHHHHhhH
Confidence 3567 999999997665 99999999988 777753320112778887 6 468999999999998762 34445555
Q ss_pred C-CCCCCCCcc--chHHhhcCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEECCCCCcchHHHHHhhhCCC
Q psy4615 186 H-KDVDGFNIV--NVGRFCLDLKTLIPCTPLGVQELIRRYKVETFGKNAVVCGRSKNVGMPIAMLLHADGA 253 (477)
Q Consensus 186 ~-KDVDGl~p~--nlg~l~~g~~~f~PcTa~Av~~Lle~~gi~l~Gk~vvViGrS~~VGkPLA~lL~~~~a 253 (477)
. +++.++++. +-|++. | .-+++.|++..|+++++++.|+++.|+|.+ .+|++++..|...+.
T Consensus 89 ~A~~~gavnti~~~~g~~~-g----~nTd~~G~~~~l~~~~~~~~~~~v~iiGaG-~~g~aia~~L~~~g~ 153 (275)
T 2hk9_A 89 TAKEIGAVNTVKFENGKAY-G----YNTDWIGFLKSLKSLIPEVKEKSILVLGAG-GASRAVIYALVKEGA 153 (275)
T ss_dssp HHHHHTCCCEEEEETTEEE-E----ECCHHHHHHHHHHHHCTTGGGSEEEEECCS-HHHHHHHHHHHHHTC
T ss_pred HHHHhCCcceEEeeCCEEE-e----ecCCHHHHHHHHHHhCCCcCCCEEEEECch-HHHHHHHHHHHHcCC
Confidence 5 677777765 344432 2 124688999999999999999999999954 689999999988775
No 21
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=98.08 E-value=6.4e-07 Score=87.51 Aligned_cols=122 Identities=12% Similarity=0.115 Sum_probs=95.3
Q ss_pred HHHHHHHcCCeeeeeEEecCCcccHHhhhccccCCCCCCccEEEEcCCCCCCCcHHHHHhhcCCC-CCCCCCCcc---ch
Q psy4615 122 KMKSAAKVGEVNALGVLYHLTLFGRSKLINPMSIPISTGVSSHISQLPLPEHMVERAVCNAVAPH-KDVDGFNIV---NV 197 (477)
Q Consensus 122 k~k~a~~vGI~~~~~~~lp~~~~t~e~~I~~L~~N~D~~V~GILVqlPLP~~ld~~~l~~aI~p~-KDVDGl~p~---nl 197 (477)
-.++++++|+++. ...++-..+.-++.++.+ + +++++|+.|++|++.++ -.+++.++|. |+++++|.. +-
T Consensus 20 hn~~~~~~gl~~~-y~~~~~~~~~l~~~i~~~--~-~~~~~G~nVT~P~K~~v--~~~ld~~~~~A~~igavNti~~~~~ 93 (272)
T 1p77_A 20 QNKLAAQTHQTME-YIAKLGDLDAFEQQLLAF--F-EEGAKGCNITSPFKERA--YQLADEYSQRAKLAEACNTLKKLDD 93 (272)
T ss_dssp HHHHHHHTTCCEE-EEEEECCTTTHHHHHHHH--H-HTTCCEEEECTTCHHHH--HHHCSEECHHHHHHTCCSEEEECTT
T ss_pred HHHHHHHCCcCeE-EEEEEcCHHHHHHHHHHH--H-hCCCCEEEECcCCHHHH--HHHHhhcCHHHHHhCCceEEEEccC
Confidence 3678999999988 777743321122778887 6 67899999999998666 5677888888 999999986 55
Q ss_pred HHhhcCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 198 GRFCLDLKTLIPCTPLGVQELIRRYKVETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 198 g~l~~g~~~f~PcTa~Av~~Lle~~gi~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
|++.-.+. .+.|+++.|+++++++.||+++|+|.+ -+|++++..|+..+..+
T Consensus 94 g~l~g~NT-----D~~G~~~~L~~~~~~~~~~~vlvlGaG-g~g~a~a~~L~~~G~~v 145 (272)
T 1p77_A 94 GKLYADNT-----DGIGLVTDLQRLNWLRPNQHVLILGAG-GATKGVLLPLLQAQQNI 145 (272)
T ss_dssp SCEEEECC-----HHHHHHHHHHHTTCCCTTCEEEEECCS-HHHHTTHHHHHHTTCEE
T ss_pred CEEEEecC-----CHHHHHHHHHHhCCCcCCCEEEEECCc-HHHHHHHHHHHHCCCEE
Confidence 66543222 378999999999999999999999975 58999999999888643
No 22
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=97.98 E-value=2.7e-06 Score=84.41 Aligned_cols=132 Identities=17% Similarity=0.161 Sum_probs=100.8
Q ss_pred eCCChhhHHHHHHHH-HHHHHcCCeeeeeEEecCCcccHHhhhccccCCCCCCccEEEEcCCCCCCCcHHHHHhhcCCC-
Q psy4615 109 VGNDSASSTYVNNKM-KSAAKVGEVNALGVLYHLTLFGRSKLINPMSIPISTGVSSHISQLPLPEHMVERAVCNAVAPH- 186 (477)
Q Consensus 109 vGdd~aS~~Yv~~k~-k~a~~vGI~~~~~~~lp~~~~t~e~~I~~L~~N~D~~V~GILVqlPLP~~ld~~~l~~aI~p~- 186 (477)
+| +|.+++|...+. ++++++|++.. ...++...+..++.++.+ + +.+++|+.|+.|++.++ -.+++.++|.
T Consensus 29 iG-~pi~hS~Sp~~hn~~~~~~Gl~~~-Y~~~~~~~~~l~~~v~~l--~-~~~~~G~nVTiP~K~~i--~~~ld~~~~~A 101 (297)
T 2egg_A 29 IG-FPVEHSLSPLMHNDAFARLGIPAR-YHLFSVEPGQVGAAIAGV--R-ALGIAGVNVTIPHKLAV--IPFLDEVDEHA 101 (297)
T ss_dssp EE-SSCTTCSHHHHHHHHHHHTTCCEE-EEEEECCTTCHHHHHHHH--H-HHTCCEEEECTTCTTTT--GGGCSEECHHH
T ss_pred EC-CCcccccCHHHHHHHHHHcCcCcE-EEEEEcCHHHHHHHHHHH--h-hCCCCeEEECCcCHHHH--HHHHHHHhHHH
Confidence 35 677888887777 89999999988 776643321122778877 5 55799999999999887 3456667776
Q ss_pred CCCCCCCcc--chHHhhcCCCCcccCCHHHHHHHHHHhC-CCCCCCeEEEECCCCCcchHHHHHhhhCCC
Q psy4615 187 KDVDGFNIV--NVGRFCLDLKTLIPCTPLGVQELIRRYK-VETFGKNAVVCGRSKNVGMPIAMLLHADGA 253 (477)
Q Consensus 187 KDVDGl~p~--nlg~l~~g~~~f~PcTa~Av~~Lle~~g-i~l~Gk~vvViGrS~~VGkPLA~lL~~~~a 253 (477)
|++++++.. +-|++.-.+. ...|+++.|++++ +++.||+++|+|.+ -+|++++..|...++
T Consensus 102 ~~iGavNti~~~~g~l~g~nT-----d~~G~~~~l~~~~~~~l~~~~vlVlGaG-g~g~aia~~L~~~G~ 165 (297)
T 2egg_A 102 RRIGAVNTIINNDGRLVGYNT-----DGLGYVQALEEEMNITLDGKRILVIGAG-GGARGIYFSLLSTAA 165 (297)
T ss_dssp HHHTCCCEEEEETTEEEEECC-----HHHHHHHHHHHHTTCCCTTCEEEEECCS-HHHHHHHHHHHTTTC
T ss_pred HHhCCCCeEECcCCeEeeccC-----CHHHHHHHHHHhCCCCCCCCEEEEECcH-HHHHHHHHHHHHCCC
Confidence 888888876 5566543222 2368999999998 99999999999975 579999999998876
No 23
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=96.65 E-value=0.00091 Score=66.35 Aligned_cols=130 Identities=12% Similarity=0.156 Sum_probs=87.6
Q ss_pred ChhhHHHHHHHH-HHHHHcCCeeeeeEEecCCcccHHhhhccccCCCCCCccEEEEcCCCCCCCcHHHHHhhcCCC-CCC
Q psy4615 112 DSASSTYVNNKM-KSAAKVGEVNALGVLYHLTLFGRSKLINPMSIPISTGVSSHISQLPLPEHMVERAVCNAVAPH-KDV 189 (477)
Q Consensus 112 d~aS~~Yv~~k~-k~a~~vGI~~~~~~~lp~~~~t~e~~I~~L~~N~D~~V~GILVqlPLP~~ld~~~l~~aI~p~-KDV 189 (477)
+|-++++--... ++++++|++.. ...++-..+..++.++.+ +. +++.|+.|..|+...+ -.+++.++|. +.+
T Consensus 13 ~Pi~hS~SP~~hn~~f~~~gl~~~-Y~~~~v~~~~l~~~v~~l--~~-~~~~G~nVTiP~K~~v--~~~ld~ls~~A~~i 86 (282)
T 3fbt_A 13 EKLGHSHSSYIHKLIFEKVGIKGI-YNLFEVPKEKLKESVDTF--KI-IKCGGLNVTIPYKVEV--MKELYEISEKARKI 86 (282)
T ss_dssp SSCCCCHHHHHHHHHHHHHTCCEE-EEEEECCGGGHHHHHHHH--HH-TTCCEEEECTTCTTGG--GGGCSEECHHHHHH
T ss_pred CCccccchHHHHHHHHHHcCCCcE-EEEEECCHHHHHHHHHHH--hc-CCCCEEEEcCCCHHHH--HHHHHhcCHHHHHc
Confidence 555666665555 78899999887 666643321122677766 43 5799999999987432 3344455554 555
Q ss_pred CCCCccch--HHhhcCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEECCCCCcchHHHHHhhhCCC
Q psy4615 190 DGFNIVNV--GRFCLDLKTLIPCTPLGVQELIRRYKVETFGKNAVVCGRSKNVGMPIAMLLHADGA 253 (477)
Q Consensus 190 DGl~p~nl--g~l~~g~~~f~PcTa~Av~~Lle~~gi~l~Gk~vvViGrS~~VGkPLA~lL~~~~a 253 (477)
.+++.... |++. |.. ....|+++.|+++++++.||+++|+|.+ -.|++++..|...++
T Consensus 87 GAVNTv~~~~g~l~-G~N----TD~~G~~~~L~~~~~~~~~k~vlvlGaG-Gaaraia~~L~~~G~ 146 (282)
T 3fbt_A 87 GAVNTLKFSREGIS-GFN----TDYIGFGKMLSKFRVEIKNNICVVLGSG-GAARAVLQYLKDNFA 146 (282)
T ss_dssp TCCCEEEECSSCEE-EEC----CHHHHHHHHHHHTTCCCTTSEEEEECSS-TTHHHHHHHHHHTTC
T ss_pred CCcceEEeeCCEEE-eeC----CcHHHHHHHHHHcCCCccCCEEEEECCc-HHHHHHHHHHHHcCC
Confidence 55554432 2221 111 1246999999999999999999999965 569999999988876
No 24
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=94.80 E-value=0.0099 Score=59.77 Aligned_cols=132 Identities=13% Similarity=0.196 Sum_probs=84.2
Q ss_pred eCCChhhHHHHHHHHH-HHHHcCCeeeeeEEecCCcccHHhhhccccCCCCCCccEEEEcCCCCCCCcHHHHHhhcCCC-
Q psy4615 109 VGNDSASSTYVNNKMK-SAAKVGEVNALGVLYHLTLFGRSKLINPMSIPISTGVSSHISQLPLPEHMVERAVCNAVAPH- 186 (477)
Q Consensus 109 vGdd~aS~~Yv~~k~k-~a~~vGI~~~~~~~lp~~~~t~e~~I~~L~~N~D~~V~GILVqlPLP~~ld~~~l~~aI~p~- 186 (477)
+| +|-++++--...+ +++++|+++. ...++-..+..++.++.+ . +.++.|+-|..|....+ -.+++.++|.
T Consensus 43 iG-~Pi~hS~SP~ihn~~f~~~Gl~~~-Y~~~~v~~~~l~~~~~~l--~-~~~~~G~nVTiP~K~~v--~~~lD~ls~~A 115 (315)
T 3tnl_A 43 IA-TPIRHSLSPTMHNEAFAKLGLDYV-YLAFEVGDKELKDVVQGF--R-AMNLRGWNVSMPNKTNI--HKYLDKLSPAA 115 (315)
T ss_dssp EE-SSCTTCSHHHHHHHHHHHHTCCEE-EEEEECCHHHHHHHHHHH--H-HTTCCEEEECTTSTTTG--GGGCSEECHHH
T ss_pred EC-CCccccccHHHHHHHHHHcCCCcE-EEEEecCHHHHHHHHHHH--h-cCCCCEEEEcCCChHHH--HHHHHhcCHHH
Confidence 35 4555555544554 7889999988 666643320112566666 3 35799999999986433 2233333333
Q ss_pred CCCCCCCccch--HHhhcCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEECCCCCcchHHHHHhhhCCC
Q psy4615 187 KDVDGFNIVNV--GRFCLDLKTLIPCTPLGVQELIRRYKVETFGKNAVVCGRSKNVGMPIAMLLHADGA 253 (477)
Q Consensus 187 KDVDGl~p~nl--g~l~~g~~~f~PcTa~Av~~Lle~~gi~l~Gk~vvViGrS~~VGkPLA~lL~~~~a 253 (477)
+.+.+++.... |++. |. =....|+++.|+++++++.||+++|+|.+ =+|+.++..|+..++
T Consensus 116 ~~iGAVNTi~~~~g~l~-G~----NTD~~Gf~~~L~~~~~~l~gk~~lVlGaG-G~g~aia~~L~~~Ga 178 (315)
T 3tnl_A 116 ELVGAVNTVVNDDGVLT-GH----ITDGTGYMRALKEAGHDIIGKKMTICGAG-GAATAICIQAALDGV 178 (315)
T ss_dssp HHHTCCSEEEEETTEEE-EE----CCHHHHHHHHHHHTTCCCTTSEEEEECCS-HHHHHHHHHHHHTTC
T ss_pred HHhCccceEEecCCEEE-Ee----CCCHHHHHHHHHHcCCCccCCEEEEECCC-hHHHHHHHHHHHCCC
Confidence 33434443211 2221 11 12367999999999999999999999964 679999999998887
No 25
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=90.17 E-value=0.1 Score=52.42 Aligned_cols=18 Identities=33% Similarity=0.518 Sum_probs=16.0
Q ss_pred CCCCCeEEEEecCCCCCC
Q psy4615 1 MVKPGACVIDVGITRIKC 18 (477)
Q Consensus 1 ~vk~gavVIDvGin~~~~ 18 (477)
|||||++|||||||+.++
T Consensus 240 ~vk~GavVIDVGin~~~~ 257 (303)
T 4b4u_A 240 WIKQGAVVVDAGFHPRDG 257 (303)
T ss_dssp GSCTTCEEEECCCBCCTT
T ss_pred cccCCCEEEEeceecCCC
Confidence 899999999999998643
No 26
>3dbi_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative, PSI-2; HET: MSE; 2.45A {Escherichia coli K12}
Probab=84.59 E-value=2.1 Score=41.17 Aligned_cols=63 Identities=10% Similarity=-0.026 Sum_probs=43.5
Q ss_pred CCCEEEEEEeC---CChhhHHHHHHHHHHHHHcCCeeeeeEEecCCcccHH-hhhccccCCCCCCccEEEEc
Q psy4615 100 RVPTLTAILVG---NDSASSTYVNNKMKSAAKVGEVNALGVLYHLTLFGRS-KLINPMSIPISTGVSSHISQ 167 (477)
Q Consensus 100 ~~P~LaiI~vG---dd~aS~~Yv~~k~k~a~~vGI~~~~~~~lp~~~~t~e-~~I~~L~~N~D~~V~GILVq 167 (477)
+..++++|.-. .++--...++...+.|++.|.+.. ......+. ..+ +.++.+ . ...|||||+.
T Consensus 60 ~~~~Igvi~~~~~~~~~~~~~~~~gi~~~a~~~g~~~~-~~~~~~~~-~~~~~~~~~l--~-~~~vdgiIi~ 126 (338)
T 3dbi_A 60 STQTLGLVVTNTLYHGIYFSELLFHAARMAEEKGRQLL-LADGKHSA-EEERQAIQYL--L-DLRCDAIMIY 126 (338)
T ss_dssp CCSEEEEEECTTTTSTTHHHHHHHHHHHHHHHTTCEEE-EEECTTSH-HHHHHHHHHH--H-HTTCSEEEEC
T ss_pred CCCEEEEEecCCcccChhHHHHHHHHHHHHHHCCCEEE-EEeCCCCh-HHHHHHHHHH--H-hCCCCEEEEe
Confidence 45577777765 455556678889999999999988 66644444 222 566666 3 3479999995
No 27
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=83.14 E-value=1.3 Score=43.56 Aligned_cols=114 Identities=11% Similarity=0.040 Sum_probs=70.4
Q ss_pred HHHHHHcCCeeeeeEEecCCcccHHhhhccccCCCCCCccEEEEcCCCCCCC----c---H-HHHHhhcCCCCCCCCCCc
Q psy4615 123 MKSAAKVGEVNALGVLYHLTLFGRSKLINPMSIPISTGVSSHISQLPLPEHM----V---E-RAVCNAVAPHKDVDGFNI 194 (477)
Q Consensus 123 ~k~a~~vGI~~~~~~~lp~~~~t~e~~I~~L~~N~D~~V~GILVqlPLP~~l----d---~-~~l~~aI~p~KDVDGl~p 194 (477)
..++++.|++.. ...++-..+..++.++.+ .+.++.|.-|-.|.-..+ | + .+.+.+++.-.--||
T Consensus 20 n~~f~~~gl~~~-Y~~~~v~~~~l~~~~~~~---~~~~~~G~nVTiP~K~~v~~~~d~l~~~A~~iGAVNTv~~~~g--- 92 (277)
T 3don_A 20 HANFQSLNLENT-YEAINVPVNQFQDIKKII---SEKSIDGFNVTIPHKERIIPYLDDINEQAKSVGAVNTVLVKDG--- 92 (277)
T ss_dssp HHHHHHTTCCCE-EEEEECCGGGGGGHHHHH---HHTTCSEEEECTTCTTTTGGGCSEECHHHHHHTCCCEEEEETT---
T ss_pred HHHHHHcCcCcE-EEEEEcCHHHHHHHHHHH---hhCCCCEEEECcCCHHHHHHHhhhCCHHHHHhCceeEEEecCC---
Confidence 467788999877 555543320112455544 233689999999975432 2 1 122233222110011
Q ss_pred cchHHhhcCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEECCCCCcchHHHHHhhhCCC
Q psy4615 195 VNVGRFCLDLKTLIPCTPLGVQELIRRYKVETFGKNAVVCGRSKNVGMPIAMLLHADGA 253 (477)
Q Consensus 195 ~nlg~l~~g~~~f~PcTa~Av~~Lle~~gi~l~Gk~vvViGrS~~VGkPLA~lL~~~~a 253 (477)
++. |. =....|+++.|++.++++.||+++|+|. .-.|++++..|...++
T Consensus 93 ----~l~-G~----NTD~~G~~~~L~~~~~~l~~k~vlvlGa-Gg~g~aia~~L~~~G~ 141 (277)
T 3don_A 93 ----KWI-GY----NTDGIGYVNGLKQIYEGIEDAYILILGA-GGASKGIANELYKIVR 141 (277)
T ss_dssp ----EEE-EE----CCHHHHHHHHHHHHSTTGGGCCEEEECC-SHHHHHHHHHHHTTCC
T ss_pred ----EEE-EE----CChHHHHHHHHHHhCCCcCCCEEEEECC-cHHHHHHHHHHHHCCC
Confidence 111 11 1235688999999999999999999995 5679999999998876
No 28
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=81.26 E-value=2.3 Score=41.62 Aligned_cols=113 Identities=16% Similarity=0.087 Sum_probs=70.3
Q ss_pred HHHHHHcCCeeeeeEEecCCcccHHhhhccccCCCCCCccEEEEcCCCCC-------CCcHH-HHHhhcCCCC-CCCC-C
Q psy4615 123 MKSAAKVGEVNALGVLYHLTLFGRSKLINPMSIPISTGVSSHISQLPLPE-------HMVER-AVCNAVAPHK-DVDG-F 192 (477)
Q Consensus 123 ~k~a~~vGI~~~~~~~lp~~~~t~e~~I~~L~~N~D~~V~GILVqlPLP~-------~ld~~-~l~~aI~p~K-DVDG-l 192 (477)
..++++.|++.. ...++-..+.-++.++.+ - +.++.|+-|-.|.-. ++++. +...+++.-. .-|| +
T Consensus 28 n~~f~~~gl~~~-Y~~~~v~~~~l~~~~~~~--~-~~~~~G~nVTiP~K~~v~~~ld~l~~~A~~iGAVNTv~~~~~g~l 103 (281)
T 3o8q_A 28 TLFARQTQQSMI-YTAQCVPVDGFTEAAKHF--F-AQGGRGCNVTVPFKEEAYRFADRLTERARLAGAVNTLKKLDDGEI 103 (281)
T ss_dssp HHHHHHTTCCEE-EEEECCCTTCHHHHHHHH--H-HTTCCEEEECTTSHHHHHHHCSEECHHHHHHTCCSEEEECTTSCE
T ss_pred HHHHHHcCCCcE-EEEeecCHHHHHHHHHHH--H-hCCCCEEEECCccHHHHHHHHhhcCHHHHhhCeeeEEEEcCCCcE
Confidence 456788999887 555543321122566655 2 346899999998532 12221 2233322211 0112 1
Q ss_pred CccchHHhhcCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEECCCCCcchHHHHHhhhCCC
Q psy4615 193 NIVNVGRFCLDLKTLIPCTPLGVQELIRRYKVETFGKNAVVCGRSKNVGMPIAMLLHADGA 253 (477)
Q Consensus 193 ~p~nlg~l~~g~~~f~PcTa~Av~~Lle~~gi~l~Gk~vvViGrS~~VGkPLA~lL~~~~a 253 (477)
.-.| ....|+++-|++.++++.||+++|+|.+ -.|++++..|...++
T Consensus 104 ~G~N-------------TD~~G~~~~L~~~~~~l~~k~vlvlGaG-g~g~aia~~L~~~G~ 150 (281)
T 3o8q_A 104 LGDN-------------TDGEGLVQDLLAQQVLLKGATILLIGAG-GAARGVLKPLLDQQP 150 (281)
T ss_dssp EEEC-------------CHHHHHHHHHHHTTCCCTTCEEEEECCS-HHHHHHHHHHHTTCC
T ss_pred EEEe-------------cHHHHHHHHHHHhCCCccCCEEEEECch-HHHHHHHHHHHhcCC
Confidence 1111 1356888888999999999999999965 679999999988875
No 29
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=78.06 E-value=0.87 Score=45.35 Aligned_cols=17 Identities=59% Similarity=0.817 Sum_probs=15.6
Q ss_pred CCCCCeEEEEecCCCCC
Q psy4615 1 MVKPGACVIDVGITRIK 17 (477)
Q Consensus 1 ~vk~gavVIDvGin~~~ 17 (477)
|||||++|||||+|+.+
T Consensus 222 ~vk~GavVIDvgi~~~~ 238 (286)
T 4a5o_A 222 WIKEGAIVIDVGINRQA 238 (286)
T ss_dssp GSCTTCEEEECCSCSSC
T ss_pred HcCCCeEEEEecccccc
Confidence 79999999999999864
No 30
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=77.16 E-value=0.8 Score=45.57 Aligned_cols=17 Identities=59% Similarity=0.987 Sum_probs=15.6
Q ss_pred CCCCCeEEEEecCCCCC
Q psy4615 1 MVKPGACVIDVGITRIK 17 (477)
Q Consensus 1 ~vk~gavVIDvGin~~~ 17 (477)
|||||++|||||+|+.+
T Consensus 221 ~vk~GavVIDVgi~~~~ 237 (285)
T 3p2o_A 221 MVKEGVIVVDVGINRLE 237 (285)
T ss_dssp GSCTTEEEEECCCEECT
T ss_pred HcCCCeEEEEeccCccc
Confidence 79999999999999864
No 31
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=76.46 E-value=4.5 Score=42.20 Aligned_cols=64 Identities=25% Similarity=0.316 Sum_probs=50.0
Q ss_pred CcccCCHHHHH----HHHHHhCCCCCCCeEEEECCCCCcchHHHHHhhhCCC---CccccceEEccCCCCCCh
Q psy4615 206 TLIPCTPLGVQ----ELIRRYKVETFGKNAVVCGRSKNVGMPIAMLLHADGA---GVSEVAGYITPVPGGVGP 271 (477)
Q Consensus 206 ~f~PcTa~Av~----~Lle~~gi~l~Gk~vvViGrS~~VGkPLA~lL~~~~a---~v~~~a~~iTPVpGGVGp 271 (477)
...+.|+.++. +.+++.|.+++||+++|.| ...||.-++.+|+..++ .+.+..+++.. |.|+.+
T Consensus 192 ~r~~aTg~Gv~~~~~~~~~~~g~~l~gk~vaVqG-~GnVG~~~a~~L~~~GakVVavsD~~G~i~d-p~Gld~ 262 (419)
T 3aoe_E 192 GRDDAAGLGALLVLEALAKRRGLDLRGARVVVQG-LGQVGAAVALHAERLGMRVVAVATSMGGMYA-PEGLDV 262 (419)
T ss_dssp SCSCHHHHHHHHHHHHHHHHHTCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEEETTEEEEC-TTCCCH
T ss_pred CCccchHHHHHHHHHHHHHhcCCCccCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEEEcCCCeEEC-CCCCCH
Confidence 34578998654 5566789999999999999 77789999999999998 45555666554 677765
No 32
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=75.23 E-value=2.4 Score=41.27 Aligned_cols=113 Identities=13% Similarity=0.003 Sum_probs=68.8
Q ss_pred HHHHHHcCCeeeeeEEecCCcccHHhhhccccCCCCCCccEEEEcCCCCC-------CCcHH-HHHhhcCCCCCCCC-CC
Q psy4615 123 MKSAAKVGEVNALGVLYHLTLFGRSKLINPMSIPISTGVSSHISQLPLPE-------HMVER-AVCNAVAPHKDVDG-FN 193 (477)
Q Consensus 123 ~k~a~~vGI~~~~~~~lp~~~~t~e~~I~~L~~N~D~~V~GILVqlPLP~-------~ld~~-~l~~aI~p~KDVDG-l~ 193 (477)
..++++.|++.. ...++-..+.-++.++.+ - ++++.|+-|-.|.-. .+++. +.+.+++.-..-|| +.
T Consensus 22 n~~f~~~gl~~~-Y~~~~v~~~~l~~~~~~~--~-~~~~~G~nVTiP~K~~v~~~~d~l~~~A~~iGAvNTv~~~~g~l~ 97 (272)
T 3pwz_A 22 GLFAQASNQQLE-YGAIEGSLDDFEAQVLQF--R-SEGGKGMNITAPFKLRAFELADRRSERAQLARAANALKFEDGRIV 97 (272)
T ss_dssp HHHHHHTTCCEE-EEEEECCTTTHHHHHHHH--H-HTTCCEEEECTTCHHHHHHHCSEECHHHHHHTCCSEEEEETTEEE
T ss_pred HHHHHHcCCCcE-EEEEEcCHHHHHHHHHHH--h-hCCCCEEEECchhHHHHHHHHhhCCHHHHHhCccceEEccCCeEE
Confidence 456788999877 555543220122556655 2 347899999998532 12221 22233222110011 11
Q ss_pred ccchHHhhcCCCCcccCCHHHHHHH-HHHhCCCCCCCeEEEECCCCCcchHHHHHhhhCCC
Q psy4615 194 IVNVGRFCLDLKTLIPCTPLGVQEL-IRRYKVETFGKNAVVCGRSKNVGMPIAMLLHADGA 253 (477)
Q Consensus 194 p~nlg~l~~g~~~f~PcTa~Av~~L-le~~gi~l~Gk~vvViGrS~~VGkPLA~lL~~~~a 253 (477)
-.| .-..|+++- |+..++++.||+++|+|.+ -.|++++..|...++
T Consensus 98 G~N-------------TD~~G~~~~lL~~~~~~l~~k~~lvlGaG-g~~~aia~~L~~~G~ 144 (272)
T 3pwz_A 98 AEN-------------FDGIGLLRDIEENLGEPLRNRRVLLLGAG-GAVRGALLPFLQAGP 144 (272)
T ss_dssp EEC-------------CHHHHHHHHHHTTSCCCCTTSEEEEECCS-HHHHHHHHHHHHTCC
T ss_pred Eec-------------CCHHHHHHHHHHHcCCCccCCEEEEECcc-HHHHHHHHHHHHcCC
Confidence 111 124588884 8889999999999999964 679999999998875
No 33
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=74.68 E-value=5.2 Score=42.04 Aligned_cols=64 Identities=25% Similarity=0.338 Sum_probs=49.4
Q ss_pred CcccCCHHHHH----HHHHHhCCCCCCCeEEEECCCCCcchHHHHHhhhCCC---CccccceEEccCCCCCCh
Q psy4615 206 TLIPCTPLGVQ----ELIRRYKVETFGKNAVVCGRSKNVGMPIAMLLHADGA---GVSEVAGYITPVPGGVGP 271 (477)
Q Consensus 206 ~f~PcTa~Av~----~Lle~~gi~l~Gk~vvViGrS~~VGkPLA~lL~~~~a---~v~~~a~~iTPVpGGVGp 271 (477)
...+.|+.++. +.+++.|.+++|++++|.| ...||.-++.+|+..++ .+.+..+++.. |.|+.+
T Consensus 209 ~r~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaVqG-fGnVG~~~a~~L~e~GakvVavsD~~G~i~d-p~Gld~ 279 (440)
T 3aog_A 209 GRRDATGRGVFITAAAAAEKIGLQVEGARVAIQG-FGNVGNAAARAFHDHGARVVAVQDHTGTVYN-EAGIDP 279 (440)
T ss_dssp TCTTHHHHHHHHHHHHHHHHHTCCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEECSSCEEEC-TTCCCH
T ss_pred CCCcchHHHHHHHHHHHHHhcCCCccCCEEEEec-cCHHHHHHHHHHHHCCCEEEEEEcCCcEEEC-CCCCCH
Confidence 34568988654 5567789999999999999 88889999999999998 34445555443 677765
No 34
>3h5o_A Transcriptional regulator GNTR; transcription regulator, GNTR,chromobacterium violaceum, PSI, SGX, DNA-binding; 2.30A {Chromobacterium violaceum}
Probab=73.99 E-value=7.9 Score=37.15 Aligned_cols=63 Identities=8% Similarity=-0.017 Sum_probs=41.8
Q ss_pred CCEEEEEEeC-CChhhHHHHHHHHHHHHHcCCeeeeeEEecCCcccHH-hhhccccCCCCCCccEEEEcC
Q psy4615 101 VPTLTAILVG-NDSASSTYVNNKMKSAAKVGEVNALGVLYHLTLFGRS-KLINPMSIPISTGVSSHISQL 168 (477)
Q Consensus 101 ~P~LaiI~vG-dd~aS~~Yv~~k~k~a~~vGI~~~~~~~lp~~~~t~e-~~I~~L~~N~D~~V~GILVql 168 (477)
...+++|.-. .++--...++...+.|++.|.... ......+. ..+ +.++.+ . ...|+|||+.-
T Consensus 62 ~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~-~~~~~~~~-~~~~~~~~~l--~-~~~vdGiIi~~ 126 (339)
T 3h5o_A 62 SRTVLVLIPSLANTVFLETLTGIETVLDAAGYQML-IGNSHYDA-GQELQLLRAY--L-QHRPDGVLITG 126 (339)
T ss_dssp -CEEEEEESCSTTCTTHHHHHHHHHHHHHTTCEEE-EEECTTCH-HHHHHHHHHH--H-TTCCSEEEEEC
T ss_pred CCEEEEEeCCCCCHHHHHHHHHHHHHHHHCCCEEE-EEeCCCCh-HHHHHHHHHH--H-cCCCCEEEEeC
Confidence 3456666543 244456678889999999999988 66655444 223 667766 3 34799999863
No 35
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=73.61 E-value=0.98 Score=45.26 Aligned_cols=18 Identities=44% Similarity=0.663 Sum_probs=15.9
Q ss_pred CCCCCeEEEEecCCCCCC
Q psy4615 1 MVKPGACVIDVGITRIKC 18 (477)
Q Consensus 1 ~vk~gavVIDvGin~~~~ 18 (477)
|+|||++|||||+|++++
T Consensus 228 ~vk~GavVIDvgi~~~~~ 245 (300)
T 4a26_A 228 WIKEGAAVVDVGTTPVPD 245 (300)
T ss_dssp GSCTTCEEEECCCEEESC
T ss_pred hcCCCcEEEEEeccCCcC
Confidence 799999999999998643
No 36
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=73.50 E-value=4.4 Score=42.65 Aligned_cols=65 Identities=26% Similarity=0.295 Sum_probs=50.3
Q ss_pred CcccCCHHHHH----HHHHHhCCCCCCCeEEEECCCCCcchHHHHHhhhCCC---CccccceEEccCCCCC-Chh
Q psy4615 206 TLIPCTPLGVQ----ELIRRYKVETFGKNAVVCGRSKNVGMPIAMLLHADGA---GVSEVAGYITPVPGGV-GPM 272 (477)
Q Consensus 206 ~f~PcTa~Av~----~Lle~~gi~l~Gk~vvViGrS~~VGkPLA~lL~~~~a---~v~~~a~~iTPVpGGV-Gp~ 272 (477)
...+.|+.++. +.+++.|.+++|++++|.| ...||.-++.+|++.++ .+.+..+++.. |.|+ .|-
T Consensus 204 ~r~~aTg~Gv~~~~~~~~~~~G~~l~g~~v~VqG-~GnVG~~~a~~L~~~GakvVavsD~~G~i~d-p~Gi~d~e 276 (449)
T 1bgv_A 204 VRPEATGYGSVYYVEAVMKHENDTLVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLSGPDGYIYD-PEGITTEE 276 (449)
T ss_dssp TTTTHHHHHHHHHHHHHHHHTTCCSTTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEEETTEEEEC-TTCSCSHH
T ss_pred CcccchhHHHHHHHHHHHHHccCCcCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEEeCCceEEC-CCcCCCHH
Confidence 34568988654 5566789999999999999 88899999999999998 44555566554 6777 653
No 37
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=73.41 E-value=9.5 Score=37.23 Aligned_cols=113 Identities=16% Similarity=0.084 Sum_probs=70.2
Q ss_pred HHHHHHcCCeeeeeEEecC-----CcccHHhhhccccCCCCCCccEEEEcCCCCCCC----c---H-HHHHhhcCCCC-C
Q psy4615 123 MKSAAKVGEVNALGVLYHL-----TLFGRSKLINPMSIPISTGVSSHISQLPLPEHM----V---E-RAVCNAVAPHK-D 188 (477)
Q Consensus 123 ~k~a~~vGI~~~~~~~lp~-----~~~t~e~~I~~L~~N~D~~V~GILVqlPLP~~l----d---~-~~l~~aI~p~K-D 188 (477)
..++++.|++.. ...+.- ..+.-++.++.+ .+.++.|+-|-.|.-..+ | + .+.+.+++.-. +
T Consensus 24 n~~f~~~gl~~~-Y~~~~~~~~~v~~~~l~~~~~~~---~~~~~~G~nVTiP~K~~v~~~lD~l~~~A~~iGAVNTv~~~ 99 (283)
T 3jyo_A 24 EAEGLAQGRATV-YRRIDTLGSRASGQDLKTLLDAA---LYLGFNGLNITHPYKQAVLPLLDEVSEQATQLGAVNTVVID 99 (283)
T ss_dssp HHHHHHTTCCEE-EEEEETTSTTTTTCCHHHHHHHH---HHTTCCEEEECTTCTTTTGGGSSEECHHHHHHTCCCEEEEC
T ss_pred HHHHHHcCCCeE-EEEEEccccCCCHHHHHHHHHHH---hhCCCCEEEECcccHHHHHHHhhhCCHHHHHhCcceEEEEC
Confidence 456788999887 666621 110122555544 234789999999975432 2 1 12333333211 0
Q ss_pred CCC-CCccchHHhhcCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEECCCCCcchHHHHHhhhCCC
Q psy4615 189 VDG-FNIVNVGRFCLDLKTLIPCTPLGVQELIRRYKVETFGKNAVVCGRSKNVGMPIAMLLHADGA 253 (477)
Q Consensus 189 VDG-l~p~nlg~l~~g~~~f~PcTa~Av~~Lle~~gi~l~Gk~vvViGrS~~VGkPLA~lL~~~~a 253 (477)
-|| +.-.|- ...|+++-|++.+.++.||+++|+|- .=+|+.++..|...++
T Consensus 100 ~~g~l~G~NT-------------D~~G~~~~l~~~~~~l~~k~vlVlGa-GG~g~aia~~L~~~G~ 151 (283)
T 3jyo_A 100 ATGHTTGHNT-------------DVSGFGRGMEEGLPNAKLDSVVQVGA-GGVGNAVAYALVTHGV 151 (283)
T ss_dssp TTSCEEEECH-------------HHHHHHHHHHHHCTTCCCSEEEEECC-SHHHHHHHHHHHHTTC
T ss_pred CCCeEEEecC-------------CHHHHHHHHHHhCcCcCCCEEEEECC-cHHHHHHHHHHHHCCC
Confidence 011 122221 24588888999999999999999996 4679999999998876
No 38
>2hsg_A Glucose-resistance amylase regulator; CCPA, transcriptional regulator, transcription regulator; 2.50A {Bacillus megaterium} SCOP: a.35.1.5 c.93.1.1 PDB: 1rzr_G 2jcg_A 1zvv_A 3oqo_A* 3oqm_A* 3oqn_A*
Probab=73.31 E-value=6.4 Score=37.58 Aligned_cols=63 Identities=13% Similarity=0.003 Sum_probs=41.3
Q ss_pred CCCEEEEEEeC-CChhhHHHHHHHHHHHHHcCCeeeeeEEecCCcccHH-hhhccccCCCCCCccEEEEc
Q psy4615 100 RVPTLTAILVG-NDSASSTYVNNKMKSAAKVGEVNALGVLYHLTLFGRS-KLINPMSIPISTGVSSHISQ 167 (477)
Q Consensus 100 ~~P~LaiI~vG-dd~aS~~Yv~~k~k~a~~vGI~~~~~~~lp~~~~t~e-~~I~~L~~N~D~~V~GILVq 167 (477)
+..++++|.-. .++--..+++...+.|++.|.... ......+. ..+ +.++.+ . ...|+|||+.
T Consensus 59 ~~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~-~~~~~~~~-~~~~~~~~~l--~-~~~vdgiI~~ 123 (332)
T 2hsg_A 59 KTTTVGVIIPDISNIFYAELARGIEDIATMYKYNII-LSNSDQNQ-DKELHLLNNM--L-GKQVDGIIFM 123 (332)
T ss_dssp -CCEEEEEEC--CCSHHHHHHHHHHHHHHHHTCEEE-EEECCSHH-HHHHHHHHHT--S-CCSSCCEEEC
T ss_pred CCCEEEEEeCCCCCcHHHHHHHHHHHHHHHcCCEEE-EEeCCCCh-HHHHHHHHHH--H-hCCCcEEEEe
Confidence 44567777643 345556667888999999999888 55433333 222 667776 4 4579999995
No 39
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=73.03 E-value=1.2 Score=44.62 Aligned_cols=17 Identities=53% Similarity=0.876 Sum_probs=14.4
Q ss_pred CCCCCeEEEEecCCCCC
Q psy4615 1 MVKPGACVIDVGITRIK 17 (477)
Q Consensus 1 ~vk~gavVIDvGin~~~ 17 (477)
|||||++|||||+|+.+
T Consensus 226 ~vk~GavVIDVgi~~~~ 242 (301)
T 1a4i_A 226 WIKPGAIVIDCGINYVP 242 (301)
T ss_dssp GSCTTCEEEECCCBC--
T ss_pred HcCCCcEEEEccCCCcc
Confidence 79999999999999864
No 40
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=72.13 E-value=2.8 Score=43.83 Aligned_cols=65 Identities=28% Similarity=0.281 Sum_probs=50.1
Q ss_pred CcccCCHHHHH----HHHHHhCCCCCCCeEEEECCCCCcchHHHHHhhhCCC---CccccceEEccCCCCCChh
Q psy4615 206 TLIPCTPLGVQ----ELIRRYKVETFGKNAVVCGRSKNVGMPIAMLLHADGA---GVSEVAGYITPVPGGVGPM 272 (477)
Q Consensus 206 ~f~PcTa~Av~----~Lle~~gi~l~Gk~vvViGrS~~VGkPLA~lL~~~~a---~v~~~a~~iTPVpGGVGp~ 272 (477)
...+.|+.++. +.+++.|.+++||+++|.| .-.||.-++.+|++.++ .+.+..+++-. |.|+.+-
T Consensus 184 ~r~~aTg~Gv~~~~~~~~~~~g~~l~gk~vaVqG-~GnVG~~aa~~L~e~GakVVavsD~~G~i~d-p~GlD~~ 255 (421)
T 1v9l_A 184 VREYATGFGVAVATREMAKKLWGGIEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVSDINGVAYR-KEGLNVE 255 (421)
T ss_dssp GGGGHHHHHHHHHHHHHHHHHHSCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEECSSCEEEC-TTCCCTH
T ss_pred CcccchHHHHHHHHHHHHHhcCCCcCCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEEECCCcEEEC-CCCCCHH
Confidence 34578999665 5566689999999999999 77899999999999998 34555555543 6777764
No 41
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=71.65 E-value=1.3 Score=44.25 Aligned_cols=17 Identities=59% Similarity=0.941 Sum_probs=15.4
Q ss_pred CCCCCeEEEEecCCCCC
Q psy4615 1 MVKPGACVIDVGITRIK 17 (477)
Q Consensus 1 ~vk~gavVIDvGin~~~ 17 (477)
|+|||++|||||+|+.+
T Consensus 220 ~vk~GavVIDVgi~r~~ 236 (288)
T 1b0a_A 220 WIKEGAIVIDVGINRLE 236 (288)
T ss_dssp TSCTTCEEEECCCEECT
T ss_pred HcCCCcEEEEccCCccC
Confidence 79999999999999854
No 42
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=71.40 E-value=7 Score=40.71 Aligned_cols=64 Identities=27% Similarity=0.268 Sum_probs=49.0
Q ss_pred CcccCCHHHHH----HHHHHhCCCCCCCeEEEECCCCCcchHHHHHhhh-CCC---CccccceEEccCCCCCCh
Q psy4615 206 TLIPCTPLGVQ----ELIRRYKVETFGKNAVVCGRSKNVGMPIAMLLHA-DGA---GVSEVAGYITPVPGGVGP 271 (477)
Q Consensus 206 ~f~PcTa~Av~----~Lle~~gi~l~Gk~vvViGrS~~VGkPLA~lL~~-~~a---~v~~~a~~iTPVpGGVGp 271 (477)
...+.|+.++. +.+++.|.+++|++++|.| ...||.-++.+|+. .++ .+.+..+++.. |.|+.+
T Consensus 183 ~r~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaVqG-~GnVG~~~a~~L~e~~GakvVavsD~~G~i~d-p~Gld~ 254 (415)
T 2tmg_A 183 GREEATGRGVKVCAGLAMDVLGIDPKKATVAVQG-FGNVGQFAALLISQELGSKVVAVSDSRGGIYN-PEGFDV 254 (415)
T ss_dssp TTTTHHHHHHHHHHHHHHHHTTCCTTTCEEEEEC-CSHHHHHHHHHHHHTTCCEEEEEECSSCEEEC-TTCCCH
T ss_pred CcCcchHHHHHHHHHHHHHHcCCCcCCCEEEEEC-CcHHHHHHHHHHHHhcCCEEEEEEeCCCeEEC-CCCCCH
Confidence 44578998654 5566789999999999999 78899999999998 888 34444455443 678876
No 43
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=71.16 E-value=4.7 Score=42.74 Aligned_cols=65 Identities=25% Similarity=0.352 Sum_probs=51.3
Q ss_pred cccCCHHHHH----HHHHHhCCCCCCCeEEEECCCCCcchHHHHHhhhCCC---CccccceEEccCCCCCChhH
Q psy4615 207 LIPCTPLGVQ----ELIRRYKVETFGKNAVVCGRSKNVGMPIAMLLHADGA---GVSEVAGYITPVPGGVGPMT 273 (477)
Q Consensus 207 f~PcTa~Av~----~Lle~~gi~l~Gk~vvViGrS~~VGkPLA~lL~~~~a---~v~~~a~~iTPVpGGVGp~T 273 (477)
-.+.|+.++. +++++.|.+++||+++|-| +..||.-++..|+..++ .|.+..+++.. |.|+.+-.
T Consensus 227 r~~aTg~Gv~~~~~~~l~~~G~~l~g~~vaVqG-~GnVG~~~a~~L~~~GakvVavsD~~G~i~d-p~Gid~ed 298 (470)
T 2bma_A 227 RVEATGYGLVYFVLEVLKSLNIPVEKQTAVVSG-SGNVALYCVQKLLHLNVKVLTLSDSNGYVYE-PNGFTHEN 298 (470)
T ss_dssp TTTHHHHHHHHHHHHHHHTTTCCGGGCEEEEEC-SSHHHHHHHHHHHHTTCEECEEEETTEEEEC-SSCCCHHH
T ss_pred ccccchHHHHHHHHHHHHhccCCcCCCEEEEEC-CcHHHHHHHHHHHHCCCEEEEEEeCCceEEC-CCCCCHHH
Confidence 4468888654 5566689999999999999 88899999999999998 45566677655 77886643
No 44
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=70.57 E-value=7.1 Score=41.14 Aligned_cols=66 Identities=21% Similarity=0.203 Sum_probs=50.6
Q ss_pred CcccCCHHHH----HHHHHHhCCCCCCCeEEEECCCCCcchHHHHHhhhCCCC---ccccceEEccCCCCCChhH
Q psy4615 206 TLIPCTPLGV----QELIRRYKVETFGKNAVVCGRSKNVGMPIAMLLHADGAG---VSEVAGYITPVPGGVGPMT 273 (477)
Q Consensus 206 ~f~PcTa~Av----~~Lle~~gi~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~---v~~~a~~iTPVpGGVGp~T 273 (477)
.-.++|+.++ .+.+++.+.+++||+++|-| +-.||.-++..|+..|+. +.+..+++.. |.|+..-.
T Consensus 209 ~r~~aTg~Gv~~~~~~~~~~~~~~l~Gk~vaVQG-~GnVG~~aa~~L~e~GakvVavsD~~G~i~d-~~Gid~e~ 281 (450)
T 4fcc_A 209 IRPEATGYGLVYFTEAMLKRHGMGFEGMRVSVSG-SGNVAQYAIEKAMEFGARVITASDSSGTVVD-ESGFTKEK 281 (450)
T ss_dssp TTTTHHHHHHHHHHHHHHHHTTCCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEEETTEEEEC-TTCCCHHH
T ss_pred CCCCceeeeHHHHHHHHHHHcCCCcCCCEEEEeC-CChHHHHHHHHHHhcCCeEEEEecCCceEEe-CCCCCHHH
Confidence 3456788865 56667789999999999999 888999999999999983 3444566553 67777643
No 45
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=70.07 E-value=1.3 Score=44.09 Aligned_cols=17 Identities=65% Similarity=0.984 Sum_probs=15.5
Q ss_pred CCCCCeEEEEecCCCCC
Q psy4615 1 MVKPGACVIDVGITRIK 17 (477)
Q Consensus 1 ~vk~gavVIDvGin~~~ 17 (477)
|||||++|||||+|+.+
T Consensus 222 ~vk~GavVIDvgi~~~~ 238 (285)
T 3l07_A 222 MVKEGAVVIDVGINHVD 238 (285)
T ss_dssp GSCTTCEEEECCCEEET
T ss_pred HcCCCcEEEEecccCcC
Confidence 79999999999999865
No 46
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=69.55 E-value=1.3 Score=43.80 Aligned_cols=15 Identities=67% Similarity=1.063 Sum_probs=14.4
Q ss_pred CCCCCeEEEEecCCC
Q psy4615 1 MVKPGACVIDVGITR 15 (477)
Q Consensus 1 ~vk~gavVIDvGin~ 15 (477)
|+|||++|||||+|+
T Consensus 211 ~vk~GavVIDvgi~~ 225 (276)
T 3ngx_A 211 MVTPGSVVIDVGINY 225 (276)
T ss_dssp GCCTTCEEEECCCEE
T ss_pred hccCCcEEEEeccCc
Confidence 799999999999998
No 47
>3jvd_A Transcriptional regulators; structural genomics, PSI-2, sugar binding protein, transcrip regulation, protein structure initiative; 2.30A {Corynebacterium glutamicum}
Probab=68.90 E-value=13 Score=35.62 Aligned_cols=64 Identities=9% Similarity=0.000 Sum_probs=42.3
Q ss_pred CCCEEEEEEeC-CChhhHHHHHHHHHHHHHcCCeeeeeEEecCCcccHH-hhhccccCCCCCCccEEEEcCC
Q psy4615 100 RVPTLTAILVG-NDSASSTYVNNKMKSAAKVGEVNALGVLYHLTLFGRS-KLINPMSIPISTGVSSHISQLP 169 (477)
Q Consensus 100 ~~P~LaiI~vG-dd~aS~~Yv~~k~k~a~~vGI~~~~~~~lp~~~~t~e-~~I~~L~~N~D~~V~GILVqlP 169 (477)
+...+++|.-. .++--...++...+.|++.|.... ...... . ..+ +.++.+ . ...|||||+.-.
T Consensus 63 ~~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~-~~~~~~-~-~~~~~~~~~l--~-~~~vdGiIi~~~ 128 (333)
T 3jvd_A 63 RSALVGVIVPDLSNEYYSESLQTIQQDLKAAGYQML-VAEANS-V-QAQDVVMESL--I-SIQAAGIIHVPV 128 (333)
T ss_dssp -CCEEEEEESCSSSHHHHHHHHHHHHHHHHHTCEEE-EEECCS-H-HHHHHHHHHH--H-HHTCSEEEECCC
T ss_pred CCCEEEEEeCCCcChHHHHHHHHHHHHHHHCCCEEE-EECCCC-h-HHHHHHHHHH--H-hCCCCEEEEcch
Confidence 34567777654 244455667888999999999988 666554 4 333 666655 2 346999999643
No 48
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=68.33 E-value=6.1 Score=41.22 Aligned_cols=64 Identities=20% Similarity=0.213 Sum_probs=48.8
Q ss_pred CcccCCHHHHH----HHHHHhCCCCCCCeEEEECCCCCcchHHHHHhhhCCCC---ccccc-----eEEccCCCCCCh
Q psy4615 206 TLIPCTPLGVQ----ELIRRYKVETFGKNAVVCGRSKNVGMPIAMLLHADGAG---VSEVA-----GYITPVPGGVGP 271 (477)
Q Consensus 206 ~f~PcTa~Av~----~Lle~~gi~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~---v~~~a-----~~iTPVpGGVGp 271 (477)
...+.|+.++. +.+++.|.+++|++++|.| .-.||.-++.+|+..++. +.+.. +++.. |.|+.+
T Consensus 186 ~r~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaVqG-~GnVG~~~a~~L~~~GakvVavsD~~~~~~~G~i~d-~~Gld~ 261 (421)
T 2yfq_A 186 GRNEATGFGVAVVVRESAKRFGIKMEDAKIAVQG-FGNVGTFTVKNIERQGGKVCAIAEWDRNEGNYALYN-ENGIDF 261 (421)
T ss_dssp TCTTHHHHHHHHHHHHHHHHTTCCGGGSCEEEEC-CSHHHHHHHHHHHHTTCCEEECCBCCSSSCSBCCBC-SSCCCH
T ss_pred CCCcchHHHHHHHHHHHHHhcCCCccCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEEEecCCCccceEEEC-CCCCCH
Confidence 44578988654 5566789999999999999 888899999999999983 34444 55443 667765
No 49
>1jye_A Lactose operon repressor; gene regulation, protein stability, protein DNA-binding, transcription; 1.70A {Escherichia coli} SCOP: c.93.1.1 PDB: 1lbi_A 1lbg_A* 1lbh_A 1jyf_A 3edc_A 1efa_A* 1jwl_A* 2pe5_A* 1tlf_A* 2p9h_A* 2paf_A* 1cjg_A* 1l1m_A 1osl_A 2kei_A* 2kej_A* 2kek_A* 2bjc_A 1lqc_A 1lcc_A* ...
Probab=67.17 E-value=11 Score=36.51 Aligned_cols=66 Identities=15% Similarity=0.111 Sum_probs=41.4
Q ss_pred CCEEEEEEeC-CChhhHHHHHHHHHHHHHcCCeeeeeEEecCC-cccHHhhhccccCCCCCCccEEEEcCCC
Q psy4615 101 VPTLTAILVG-NDSASSTYVNNKMKSAAKVGEVNALGVLYHLT-LFGRSKLINPMSIPISTGVSSHISQLPL 170 (477)
Q Consensus 101 ~P~LaiI~vG-dd~aS~~Yv~~k~k~a~~vGI~~~~~~~lp~~-~~t~e~~I~~L~~N~D~~V~GILVqlPL 170 (477)
...+++|.-. .++--..+++...+.|++.|..+. ......+ .+.+.+.++.+ - ...|||||+..|.
T Consensus 61 ~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~-~~~~~~~~~~~~~~~l~~l--~-~~~vdGiIi~~~~ 128 (349)
T 1jye_A 61 SLLIGVATSSLALHAPSQIVAAILSRADQLGASVV-VSMVERSGVEACKTAVHNL--L-AQRVSGLIINYPL 128 (349)
T ss_dssp -CEEEEEESCTTSHHHHHHHHHHHHHHHHTTCEEE-EEECCSSSHHHHHHHHHHH--H-TTTCSCEEEESCC
T ss_pred CCEEEEEeCCCCcccHHHHHHHHHHHHHHcCCEEE-EEeCCCCcHHHHHHHHHHH--H-HCCCCEEEEecCC
Confidence 4456666533 244445567888999999999888 6554433 20122566666 3 3469999997664
No 50
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=66.77 E-value=6.6 Score=39.10 Aligned_cols=113 Identities=15% Similarity=0.152 Sum_probs=68.1
Q ss_pred HHHHHHcCCeeeeeEEecCCcccHHhhhccccCCCCCCccEEEEcCCCCC----C---CcH-HHHHhhcCCCCCCCC-CC
Q psy4615 123 MKSAAKVGEVNALGVLYHLTLFGRSKLINPMSIPISTGVSSHISQLPLPE----H---MVE-RAVCNAVAPHKDVDG-FN 193 (477)
Q Consensus 123 ~k~a~~vGI~~~~~~~lp~~~~t~e~~I~~L~~N~D~~V~GILVqlPLP~----~---ld~-~~l~~aI~p~KDVDG-l~ 193 (477)
..++++.|++.. ...++-..+..++.++.+ . +.++.|.-|-.|.-. . +++ .+.+.+++.-.--|| +.
T Consensus 51 n~~f~~~gl~~~-Y~~~~v~~~~l~~~~~~~--~-~~~~~G~nVTiP~K~~v~~~lD~ls~~A~~iGAVNTi~~~~g~l~ 126 (312)
T 3t4e_A 51 NKALEKAGLPYT-YMAFEVDNTTFASAIEGL--K-ALKMRGTGVSMPNKQLACEYVDELTPAAKLVGAINTIVNDDGYLR 126 (312)
T ss_dssp HHHHHHHTCSEE-EEEEECCTTTHHHHHHHH--H-HTTCCEEEECTTSHHHHGGGCSEECHHHHHHTCCSEEEEETTEEE
T ss_pred HHHHHHcCCCcE-EEeEecCHHHHHHHHHHH--h-hCCCCEEEECchhHHHHHHHhhhcCHHHHHhCceeEEEecCCEEE
Confidence 466788999877 555543320123555544 2 236899999998521 1 221 122233222110011 11
Q ss_pred ccchHHhhcCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEECCCCCcchHHHHHhhhCCC
Q psy4615 194 IVNVGRFCLDLKTLIPCTPLGVQELIRRYKVETFGKNAVVCGRSKNVGMPIAMLLHADGA 253 (477)
Q Consensus 194 p~nlg~l~~g~~~f~PcTa~Av~~Lle~~gi~l~Gk~vvViGrS~~VGkPLA~lL~~~~a 253 (477)
-.| ....|+++-|++.++++.||+++|+|- .=.|+.++..|...++
T Consensus 127 G~N-------------TD~~Gf~~~L~~~~~~l~gk~~lVlGA-GGaaraia~~L~~~G~ 172 (312)
T 3t4e_A 127 GYN-------------TDGTGHIRAIKESGFDMRGKTMVLLGA-GGAATAIGAQAAIEGI 172 (312)
T ss_dssp EEC-------------HHHHHHHHHHHHTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTC
T ss_pred EeC-------------CcHHHHHHHHHhcCCCcCCCEEEEECc-CHHHHHHHHHHHHcCC
Confidence 111 134588888998999999999999995 4558899999988876
No 51
>2o20_A Catabolite control protein A; CCPA, transcriptional regulator, helix-turn-helix, transcrip; 1.90A {Lactococcus lactis}
Probab=66.05 E-value=8.3 Score=36.86 Aligned_cols=64 Identities=13% Similarity=-0.009 Sum_probs=41.2
Q ss_pred CCCEEEEEEeC-CChhhHHHHHHHHHHHHHcCCeeeeeEEecCCcccHH-hhhccccCCCCCCccEEEEcC
Q psy4615 100 RVPTLTAILVG-NDSASSTYVNNKMKSAAKVGEVNALGVLYHLTLFGRS-KLINPMSIPISTGVSSHISQL 168 (477)
Q Consensus 100 ~~P~LaiI~vG-dd~aS~~Yv~~k~k~a~~vGI~~~~~~~lp~~~~t~e-~~I~~L~~N~D~~V~GILVql 168 (477)
...++++|.-. .++--..+++...+.|++.|.... ......+. ..+ +.++.+ . ...|+|||+.-
T Consensus 62 ~~~~Ig~i~~~~~~~~~~~~~~gi~~~~~~~g~~~~-~~~~~~~~-~~~~~~~~~l--~-~~~vdgiI~~~ 127 (332)
T 2o20_A 62 RTTTVGVILPTITSTYFAAITRGVDDIASMYKYNMI-LANSDNDV-EKEEKVLETF--L-SKQVDGIVYMG 127 (332)
T ss_dssp CCCEEEEEESCTTCHHHHHHHHHHHHHHHHTTCEEE-EEECTTCH-HHHHHHHHHH--H-HTTCSEEEECS
T ss_pred CCCEEEEEeCCCCCcHHHHHHHHHHHHHHHcCCEEE-EEECCCCh-HHHHHHHHHH--H-hCCCCEEEEeC
Confidence 34567777642 244445567788899999999888 65544333 222 666666 3 34699999963
No 52
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=65.15 E-value=47 Score=33.37 Aligned_cols=168 Identities=9% Similarity=0.041 Sum_probs=94.9
Q ss_pred hhhhhccccccccHHHHHHHHHHHHHHHHHHHHcCC---CC-CEEEEEEeCCChhhHHHHHHHHHHHHHcCCeeeeeEEe
Q psy4615 64 LHKKANKAQIIDGKFIANTILEELKDEVKAWVALGH---RV-PTLTAILVGNDSASSTYVNNKMKSAAKVGEVNALGVLY 139 (477)
Q Consensus 64 l~~~~~ma~ILdGk~lA~~I~~~lk~~v~~lk~~~g---~~-P~LaiI~vGdd~aS~~Yv~~k~k~a~~vGI~~~~~~~l 139 (477)
|...++|-.+|+-..+..+=.+.|-+...++|+... .+ ..++.|..- |+.+ ---+=..++.++|.++. .+.
T Consensus 7 ~~~~~~~rhllsi~dls~~ei~~ll~~A~~lk~~~~~~~L~gk~la~lF~e--~STR-TR~SFE~A~~~LGg~~i-~l~- 81 (323)
T 3gd5_A 7 LGATRFRPDLLSLDDLDEAQLHALLTLAHQLKRGERVANLHGKVLGLVFLK--ASTR-TRVSFTVAMYQLGGQVI-DLS- 81 (323)
T ss_dssp ---CCCCSCBSSGGGSCHHHHHHHHHHHHHHHHTSSCCCCTTCEEEEEESS--CCHH-HHHHHHHHHHHTTCEEE-EC--
T ss_pred hCccccCCCccchHhCCHHHHHHHHHHHHHHHhcccccccCCCEEEEEecC--CCcc-hHhhHHHHHHHcCCeEE-EeC-
Confidence 333334444555555544444455555556654321 11 245555432 2322 22344788999999887 543
Q ss_pred cCCc-----ccHHhhhccccCCCCCCccEEEEcCCCCCCCcHHHHHhhcCCCCCCCCCCccchHHhhcCCCCcccCCHHH
Q psy4615 140 HLTL-----FGRSKLINPMSIPISTGVSSHISQLPLPEHMVERAVCNAVAPHKDVDGFNIVNVGRFCLDLKTLIPCTPLG 214 (477)
Q Consensus 140 p~~~-----~t~e~~I~~L~~N~D~~V~GILVqlPLP~~ld~~~l~~aI~p~KDVDGl~p~nlg~l~~g~~~f~PcTa~A 214 (477)
+.++ |+.++.++-| +.= +|+|++--| ++-....+.+.. +++-+|. |...+.||=+.+
T Consensus 82 ~~~ss~~kgEsl~DTarvL--s~~--~D~iviR~~--~~~~~~~lA~~~-------~vPVINa-----g~~~~HPtQaLa 143 (323)
T 3gd5_A 82 PSNTQVGRGEPVRDTARVL--GRY--VDGLAIRTF--AQTELEEYAHYA-------GIPVINA-----LTDHEHPCQVVA 143 (323)
T ss_dssp ---------CCHHHHHHHH--TTT--CSEEEEECS--SHHHHHHHHHHH-------CSCEEEE-----ECSSCCHHHHHH
T ss_pred cccccCCCCCCHHHHHHHH--HHh--CCEEEEecC--ChhHHHHHHHhC-------CCCEEeC-----CCCCCCcHHHHH
Confidence 2222 0111555555 433 789999765 333333343332 2445664 345788998887
Q ss_pred -HHHHHHHhCCCCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 215 -VQELIRRYKVETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 215 -v~~Lle~~gi~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
++.+.|++| .++|++++++|-.+.|..-+...+..-|+++
T Consensus 144 Dl~Ti~e~~g-~l~glkva~vGD~~rva~Sl~~~~~~~G~~v 184 (323)
T 3gd5_A 144 DLLTIRENFG-RLAGLKLAYVGDGNNVAHSLLLGCAKVGMSI 184 (323)
T ss_dssp HHHHHHHHHS-CCTTCEEEEESCCCHHHHHHHHHHHHHTCEE
T ss_pred HHHHHHHHhC-CCCCCEEEEECCCCcHHHHHHHHHHHcCCEE
Confidence 678888888 7999999999987777777777776666644
No 53
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=64.97 E-value=8.8 Score=40.52 Aligned_cols=62 Identities=29% Similarity=0.405 Sum_probs=48.7
Q ss_pred ccCCHHHH----HHHHHHhCCCCCCCeEEEECCCCCcchHHHHHhhhCCCC---ccccceEEccCCCCCCh
Q psy4615 208 IPCTPLGV----QELIRRYKVETFGKNAVVCGRSKNVGMPIAMLLHADGAG---VSEVAGYITPVPGGVGP 271 (477)
Q Consensus 208 ~PcTa~Av----~~Lle~~gi~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~---v~~~a~~iTPVpGGVGp 271 (477)
..+|+.++ .+++++.|.+++||+++|-| +..||.-++.+|+..|+. |.+..+++.. |.|+.+
T Consensus 215 ~~aTg~Gv~~~~~~~~~~~g~~l~g~~VaVQG-~GnVG~~aa~~L~e~GakvVavsD~~G~iyd-~~Gld~ 283 (456)
T 3r3j_A 215 AEATGYGVVYFAENVLKDLNDNLENKKCLVSG-SGNVAQYLVEKLIEKGAIVLTMSDSNGYILE-PNGFTK 283 (456)
T ss_dssp TTHHHHHHHHHHHHHHHTTTCCSTTCCEEEEC-CSHHHHHHHHHHHHHTCCBCCEECSSCEEEC-TTCCCH
T ss_pred CcccchHHHHHHHHHHHHcCCCccCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECCCCcEEC-CCCCCH
Confidence 34788865 45556679999999999999 888999999999999983 4555666653 778876
No 54
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=63.85 E-value=1.8 Score=42.96 Aligned_cols=17 Identities=65% Similarity=1.152 Sum_probs=15.4
Q ss_pred CCCCCeEEEEecCCCCC
Q psy4615 1 MVKPGACVIDVGITRIK 17 (477)
Q Consensus 1 ~vk~gavVIDvGin~~~ 17 (477)
|||||++|||||+|+.+
T Consensus 221 ~vk~GavVIDVgi~r~~ 237 (281)
T 2c2x_A 221 MVRPGAAVIDVGVSRTD 237 (281)
T ss_dssp GSCTTCEEEECCEEEET
T ss_pred HcCCCcEEEEccCCCCC
Confidence 79999999999999854
No 55
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=61.35 E-value=5.6 Score=41.59 Aligned_cols=64 Identities=25% Similarity=0.414 Sum_probs=49.8
Q ss_pred CcccCCHHHH----HHHHHHhCCCCCCCeEEEECCCCCcchHHHHHhhhCCC---CccccceEEccCCCCCCh
Q psy4615 206 TLIPCTPLGV----QELIRRYKVETFGKNAVVCGRSKNVGMPIAMLLHADGA---GVSEVAGYITPVPGGVGP 271 (477)
Q Consensus 206 ~f~PcTa~Av----~~Lle~~gi~l~Gk~vvViGrS~~VGkPLA~lL~~~~a---~v~~~a~~iTPVpGGVGp 271 (477)
.-.+.|+.++ .+.+++.|.+++||+++|.| +..||.-++.+|+..++ .+.+..+++. -|.|+.+
T Consensus 195 ~r~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaVqG-~GnVG~~aa~~l~e~GakVVavsD~~G~iy-d~~GlD~ 265 (424)
T 3k92_A 195 GRETATAQGVTICIEEAVKKKGIKLQNARIIIQG-FGNAGSFLAKFMHDAGAKVIGISDANGGLY-NPDGLDI 265 (424)
T ss_dssp TTTTHHHHHHHHHHHHHHHHTTCCGGGCEEEEEC-CSHHHHHHHHHHHHHTCEEEEEECSSCEEE-CTTCCCH
T ss_pred CCcccHHHHHHHHHHHHHHHcCCCcccCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECCCCcEE-CCCCCCH
Confidence 3457899865 45556679999999999999 88899999999999988 3455556665 3678875
No 56
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=60.92 E-value=7.4 Score=37.31 Aligned_cols=45 Identities=36% Similarity=0.357 Sum_probs=39.5
Q ss_pred CHHHHHHHHHHh-CCCCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 211 TPLGVQELIRRY-KVETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 211 Ta~Av~~Lle~~-gi~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
++.|.++.++.. +.++.||+++|+|.+.-+|+.++..|+.+++.|
T Consensus 101 d~~g~~~~l~~~~~~~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V 146 (287)
T 1lu9_A 101 TAAAGVALVVKAAGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEV 146 (287)
T ss_dssp HHHHHHHHHHHHTTSCCTTCEEEEETCSSHHHHHHHHHHHHTTCEE
T ss_pred hHHHHHHHHHHhhccCCCCCEEEEECCCcHHHHHHHHHHHHCcCEE
Confidence 456888888888 889999999999988889999999999998743
No 57
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=60.73 E-value=3.9 Score=37.27 Aligned_cols=31 Identities=19% Similarity=0.157 Sum_probs=26.3
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
.+.||+++|+|.+..+|+.++..|+.++..|
T Consensus 18 ~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V 48 (236)
T 3e8x_A 18 YFQGMRVLVVGANGKVARYLLSELKNKGHEP 48 (236)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTCEE
T ss_pred CcCCCeEEEECCCChHHHHHHHHHHhCCCeE
Confidence 5689999999999999999999999998854
No 58
>1jx6_A LUXP protein; protein-ligand complex, signaling protein; HET: AI2; 1.50A {Vibrio harveyi} SCOP: c.93.1.1 PDB: 1zhh_A* 2hj9_A*
Probab=60.15 E-value=38 Score=32.11 Aligned_cols=83 Identities=8% Similarity=-0.147 Sum_probs=51.0
Q ss_pred HHHHHHHHHHHHHHHHHH-------cCCCCCEEEEEEeC--CChhhHHHHHHHHHHHHHcCCeeeeeEEe-cC---Cccc
Q psy4615 79 IANTILEELKDEVKAWVA-------LGHRVPTLTAILVG--NDSASSTYVNNKMKSAAKVGEVNALGVLY-HL---TLFG 145 (477)
Q Consensus 79 lA~~I~~~lk~~v~~lk~-------~~g~~P~LaiI~vG--dd~aS~~Yv~~k~k~a~~vGI~~~~~~~l-p~---~~~t 145 (477)
++.+-|+++.+.+++|-= +.+...++++|.-+ .++--...++...+.|++.|.++. ...+ .. +. .
T Consensus 14 ~s~~tr~rV~~aa~elgY~pn~~Ar~~~~~~~Igvi~~~~~~~~~~~~~~~gi~~~a~~~g~~~~-~~~~~~~~~~~~-~ 91 (342)
T 1jx6_A 14 EFPEQRNLTNALSEAVRAQPVPLSKPTQRPIKISVVYPGQQVSDYWVRNIASFEKRLYKLNINYQ-LNQVFTRPNADI-K 91 (342)
T ss_dssp HCHHHHHHHHHHHHHHHSCCCCCSSCCSSCEEEEEEECCCSSCCHHHHHHHHHHHHHHHTTCCEE-EEEEECCTTCCH-H
T ss_pred hcHHHHHHHHHHHHHhcCCCCccccccCCceEEEEEecCCcccHHHHHHHHHHHHHHHHcCCeEE-EEecCCCCccCH-H
Confidence 445566666666666531 11233467777654 455556677888999999998887 5432 22 33 2
Q ss_pred HH-hhhccccCCCCCCccEEEE
Q psy4615 146 RS-KLINPMSIPISTGVSSHIS 166 (477)
Q Consensus 146 ~e-~~I~~L~~N~D~~V~GILV 166 (477)
.+ +.++.+ -. ..|+|||+
T Consensus 92 ~~~~~i~~l--~~-~~vdgiIi 110 (342)
T 1jx6_A 92 QQSLSLMEA--LK-SKSDYLIF 110 (342)
T ss_dssp HHHHHHHHH--HH-TTCSEEEE
T ss_pred HHHHHHHHH--Hh-cCCCEEEE
Confidence 22 666666 32 36999999
No 59
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=59.96 E-value=15 Score=39.13 Aligned_cols=63 Identities=37% Similarity=0.351 Sum_probs=48.7
Q ss_pred cccCCHHHHHHHHH----------HhCC--CCCCCeEEEECCCCCcchHHHHHhhhCCC---CccccceEEccCCCCCCh
Q psy4615 207 LIPCTPLGVQELIR----------RYKV--ETFGKNAVVCGRSKNVGMPIAMLLHADGA---GVSEVAGYITPVPGGVGP 271 (477)
Q Consensus 207 f~PcTa~Av~~Lle----------~~gi--~l~Gk~vvViGrS~~VGkPLA~lL~~~~a---~v~~~a~~iTPVpGGVGp 271 (477)
-.++|+.++...++ ..|. +++||+|+|-| +..||.-++..|+..++ .+.+..+++. -|.|+.+
T Consensus 211 r~eATg~GV~~~~~~~l~~~~~~~~~G~~~~l~g~tVaVQG-~GNVG~~aa~~L~e~GakVVavsDs~G~iy-d~~Gid~ 288 (501)
T 3mw9_A 211 RISATGRGVFHGIENFINEASYMSILGMTPGFGDKTFVVQG-FGNVGLHSMRYLHRFGAKCITVGESDGSIW-NPDGIDP 288 (501)
T ss_dssp TTTHHHHHHHHHHHHHHTCHHHHHHTTCCSSSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEECSSCEEE-CTTCCCH
T ss_pred CCCchHHHHHHHHHHHHhhhHHHHHcCCCCCcCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEEcCCceEE-CCCCCCH
Confidence 45689998876665 4576 58999999999 88999999999999998 3444455555 3678875
No 60
>3bil_A Probable LACI-family transcriptional regulator; structural genomics, unknown function, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum atcc 13032}
Probab=58.71 E-value=10 Score=36.81 Aligned_cols=63 Identities=16% Similarity=0.065 Sum_probs=39.4
Q ss_pred CCEEEEEEeC-CChhhHHHHHHHHHHHHHcCCeeeeeEEecCCcccHH-hhhccccCCCCCCccEEEEcC
Q psy4615 101 VPTLTAILVG-NDSASSTYVNNKMKSAAKVGEVNALGVLYHLTLFGRS-KLINPMSIPISTGVSSHISQL 168 (477)
Q Consensus 101 ~P~LaiI~vG-dd~aS~~Yv~~k~k~a~~vGI~~~~~~~lp~~~~t~e-~~I~~L~~N~D~~V~GILVql 168 (477)
..++++|.-. .++--...++...+.|++.|.... ......+. ..+ +.++.+ . ...|||||+.-
T Consensus 66 s~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~-~~~~~~~~-~~~~~~~~~l--~-~~~vdgiI~~~ 130 (348)
T 3bil_A 66 SNTIGVIVPSLINHYFAAMVTEIQSTASKAGLATI-ITNSNEDA-TTMSGSLEFL--T-SHGVDGIICVP 130 (348)
T ss_dssp --CEEEEESCSSSHHHHHHHHHHHHHHHHTTCCEE-EEECTTCH-HHHHHHHHHH--H-HTTCSCEEECC
T ss_pred CCEEEEEeCCCCCcHHHHHHHHHHHHHHHcCCEEE-EEeCCCCH-HHHHHHHHHH--H-hCCCCEEEEeC
Confidence 3456766532 244445567788899999999888 65544443 222 566666 3 34699999853
No 61
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=58.56 E-value=65 Score=29.37 Aligned_cols=66 Identities=15% Similarity=0.116 Sum_probs=45.5
Q ss_pred CCCEEEEEEeC-CChhhHHHHHHHHHHHHHcCCeeeeeEEecCCcccHH-hhhccccCCCCCCccEEEEcCCC
Q psy4615 100 RVPTLTAILVG-NDSASSTYVNNKMKSAAKVGEVNALGVLYHLTLFGRS-KLINPMSIPISTGVSSHISQLPL 170 (477)
Q Consensus 100 ~~P~LaiI~vG-dd~aS~~Yv~~k~k~a~~vGI~~~~~~~lp~~~~t~e-~~I~~L~~N~D~~V~GILVqlPL 170 (477)
+..++++|.-. +++--...++...+.|++.|.++. .+....+. ..+ +.++.+ . ..+|+|||+.-..
T Consensus 6 ~s~~Igvi~~~~~~~~~~~~~~gi~~~~~~~g~~~~-~~~~~~~~-~~~~~~~~~l--~-~~~vdgiIi~~~~ 73 (276)
T 3jy6_A 6 SSKLIAVIVANIDDYFSTELFKGISSILESRGYIGV-LFDANADI-EREKTLLRAI--G-SRGFDGLILQSFS 73 (276)
T ss_dssp CCCEEEEEESCTTSHHHHHHHHHHHHHHHTTTCEEE-EEECTTCH-HHHHHHHHHH--H-TTTCSEEEEESSC
T ss_pred CCcEEEEEeCCCCchHHHHHHHHHHHHHHHCCCEEE-EEeCCCCH-HHHHHHHHHH--H-hCCCCEEEEecCC
Confidence 55677777754 244455667888999999999998 76655554 223 667766 3 4479999997443
No 62
>3e3m_A Transcriptional regulator, LACI family; structural genomics, DNA-binding, plasmid, transcription regulation, PSI-2; 1.60A {Silicibacter pomeroyi}
Probab=56.85 E-value=15 Score=35.53 Aligned_cols=62 Identities=8% Similarity=-0.057 Sum_probs=40.1
Q ss_pred CCEEEEEEeCC-ChhhHHHHHHHHHHHHHcCCeeeeeEEecCCcccHH-hhhccccCCCCCCccEEEEc
Q psy4615 101 VPTLTAILVGN-DSASSTYVNNKMKSAAKVGEVNALGVLYHLTLFGRS-KLINPMSIPISTGVSSHISQ 167 (477)
Q Consensus 101 ~P~LaiI~vGd-d~aS~~Yv~~k~k~a~~vGI~~~~~~~lp~~~~t~e-~~I~~L~~N~D~~V~GILVq 167 (477)
...+++|.-.- ++--..+++...+.|++.|..+. ......+. ..+ +.++.+ . ...|+|||+.
T Consensus 70 ~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~-~~~~~~~~-~~~~~~~~~l--~-~~~vdGiI~~ 133 (355)
T 3e3m_A 70 SGFVGLLLPSLNNLHFAQTAQSLTDVLEQGGLQLL-LGYTAYSP-EREEQLVETM--L-RRRPEAMVLS 133 (355)
T ss_dssp -CEEEEEESCSBCHHHHHHHHHHHHHHHHTTCEEE-EEECTTCH-HHHHHHHHHH--H-HTCCSEEEEE
T ss_pred CCEEEEEeCCCCchHHHHHHHHHHHHHHHCCCEEE-EEeCCCCh-HHHHHHHHHH--H-hCCCCEEEEe
Confidence 34566665432 34445567888999999999988 66554444 223 666665 3 3469999995
No 63
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=56.65 E-value=4.4 Score=42.58 Aligned_cols=48 Identities=35% Similarity=0.400 Sum_probs=38.5
Q ss_pred cccCCHHHHHHHHHHhCCCCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 207 LIPCTPLGVQELIRRYKVETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 207 f~PcTa~Av~~Lle~~gi~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
..+|+...+-.+.+..+..++||+++|+|-+.+ |+.+|.+|...|+.|
T Consensus 190 ~~Gt~~slldgi~ratg~~L~GktVgIiG~G~I-G~~vA~~Lka~Ga~V 237 (436)
T 3h9u_A 190 LYGCRESLVDGIKRATDVMIAGKTACVCGYGDV-GKGCAAALRGFGARV 237 (436)
T ss_dssp HHHHHHHHHHHHHHHHCCCCTTCEEEEECCSHH-HHHHHHHHHHTTCEE
T ss_pred cccchHHHHHHHHHhcCCcccCCEEEEEeeCHH-HHHHHHHHHHCCCEE
Confidence 445666666666677899999999999996654 999999999888754
No 64
>1qpz_A PURA, protein (purine nucleotide synthesis repressor); transcription regulation, DNA-binding, purine biosynthesis; HET: DNA HPA; 2.50A {Escherichia coli} SCOP: a.35.1.5 c.93.1.1 PDB: 1bdi_A* 1qp0_A* 1qp4_A* 1pnr_A* 1wet_A* 1zay_A* 1vpw_A* 2pue_A* 2puf_A* 2pug_A* 1bdh_A* 1qp7_A* 1qqa_A* 1qqb_A* 2puc_A* 2pua_A* 2pub_A* 2pud_A* 1jfs_A* 1jh9_A* ...
Probab=56.03 E-value=28 Score=33.29 Aligned_cols=63 Identities=8% Similarity=0.008 Sum_probs=41.5
Q ss_pred CCCEEEEEEeC-CChhhHHHHHHHHHHHHHcCCeeeeeEEecCCcccHH-hhhccccCCCCCCccEEEEc
Q psy4615 100 RVPTLTAILVG-NDSASSTYVNNKMKSAAKVGEVNALGVLYHLTLFGRS-KLINPMSIPISTGVSSHISQ 167 (477)
Q Consensus 100 ~~P~LaiI~vG-dd~aS~~Yv~~k~k~a~~vGI~~~~~~~lp~~~~t~e-~~I~~L~~N~D~~V~GILVq 167 (477)
+..++++|.-. .++--..+++...+.|++.|.+.. ...-..+. ..+ +.++.+ . ...|+|||+.
T Consensus 57 ~~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~-~~~~~~~~-~~~~~~~~~l--~-~~~vdgiI~~ 121 (340)
T 1qpz_A 57 HTKSIGLLATSSEAAYFAEIIEAVEKNCFQKGYTLI-LGNAWNNL-EKQRAYLSMM--A-QKRVDGLLVM 121 (340)
T ss_dssp CCSEEEEEESCSCSHHHHHHHHHHHHHHHHTTCEEE-EEECTTCH-HHHHHHHHHH--H-HTTCSEEEEC
T ss_pred CCCEEEEEeCCCCChHHHHHHHHHHHHHHHcCCEEE-EEeCCCCH-HHHHHHHHHH--H-cCCCCEEEEe
Confidence 45577777643 345455667888999999999887 55433333 222 566666 3 3469999985
No 65
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=55.52 E-value=8.4 Score=39.21 Aligned_cols=49 Identities=24% Similarity=0.237 Sum_probs=39.9
Q ss_pred CcccCCHHHHH----HHHHHhCC-CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 206 TLIPCTPLGVQ----ELIRRYKV-ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 206 ~f~PcTa~Av~----~Lle~~gi-~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
...+.|+.++. +.+++.|. ++.||+++|+| .-.||.-++..|+..++.|
T Consensus 148 ~~~~aTg~Gv~~~~~~~~~~~G~~~L~GktV~I~G-~GnVG~~~A~~l~~~GakV 201 (355)
T 1c1d_A 148 SSAFTTAVGVFEAMKATVAHRGLGSLDGLTVLVQG-LGAVGGSLASLAAEAGAQL 201 (355)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTTCCCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEE
T ss_pred CchhHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEC-cCHHHHHHHHHHHHCCCEE
Confidence 34468988654 55667798 89999999999 6677999999999999855
No 66
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=55.32 E-value=5.3 Score=38.40 Aligned_cols=31 Identities=29% Similarity=0.365 Sum_probs=28.9
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
+|+||.++|+|.|.=+|+-+|..|+.+|+.|
T Consensus 8 ~L~GK~alVTGas~GIG~aia~~la~~Ga~V 38 (261)
T 4h15_A 8 NLRGKRALITAGTKGAGAATVSLFLELGAQV 38 (261)
T ss_dssp CCTTCEEEESCCSSHHHHHHHHHHHHTTCEE
T ss_pred CCCCCEEEEeccCcHHHHHHHHHHHHcCCEE
Confidence 7899999999999999999999999999944
No 67
>3ctp_A Periplasmic binding protein/LACI transcriptional; structural genomics, protein structure initiative; HET: XLF; 1.41A {Alkaliphilus metalliredigens}
Probab=54.86 E-value=16 Score=34.85 Aligned_cols=61 Identities=10% Similarity=-0.015 Sum_probs=39.0
Q ss_pred CCCEEEEEEeC-CChhhHHHHHHHHHHHHHcCCeeeeeEEecCCcccHH-hhhccccCCCCCCccEEE
Q psy4615 100 RVPTLTAILVG-NDSASSTYVNNKMKSAAKVGEVNALGVLYHLTLFGRS-KLINPMSIPISTGVSSHI 165 (477)
Q Consensus 100 ~~P~LaiI~vG-dd~aS~~Yv~~k~k~a~~vGI~~~~~~~lp~~~~t~e-~~I~~L~~N~D~~V~GIL 165 (477)
...++++|.-. .++--..+++...+.|++.|.... ......+. ..+ +.++.+ . ...|+|||
T Consensus 59 ~~~~Igvi~~~~~~~~~~~~~~gi~~~~~~~g~~~~-~~~~~~~~-~~~~~~~~~l--~-~~~vdgiI 121 (330)
T 3ctp_A 59 NSKTIGLMVPNISNPFFNQMASVIEEYAKNKGYTLF-LCNTDDDK-EKEKTYLEVL--Q-SHRVAGII 121 (330)
T ss_dssp -CCEEEEEESCTTSHHHHHHHHHHHHHHHHTTCEEE-EEECTTCH-HHHHHHHHHH--H-HTTCSEEE
T ss_pred CCCEEEEEeCCCCCcHHHHHHHHHHHHHHHCCCEEE-EEeCCCCh-HHHHHHHHHH--H-hCCCCEEE
Confidence 34567777643 244445567888899999999888 66544443 222 666666 3 34699999
No 68
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=53.46 E-value=5.6 Score=38.35 Aligned_cols=32 Identities=38% Similarity=0.518 Sum_probs=29.6
Q ss_pred CCCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 224 VETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 224 i~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
.+|+||.++|+|.+.=+|+-+|..|+.+|+.|
T Consensus 5 f~L~gKvalVTGas~GIG~aia~~la~~Ga~V 36 (255)
T 4g81_D 5 FDLTGKTALVTGSARGLGFAYAEGLAAAGARV 36 (255)
T ss_dssp TCCTTCEEEETTCSSHHHHHHHHHHHHTTCEE
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEE
Confidence 37899999999999999999999999999955
No 69
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=52.24 E-value=1.4e+02 Score=30.17 Aligned_cols=158 Identities=9% Similarity=0.030 Sum_probs=90.7
Q ss_pred ccccHHHHHHHHHHHHHHHHHHHHcCC---CC-CEEEEEEeCCChhhHHHHHHHHHHHHHcCCeeeeeEEecCCcccHH-
Q psy4615 73 IIDGKFIANTILEELKDEVKAWVALGH---RV-PTLTAILVGNDSASSTYVNNKMKSAAKVGEVNALGVLYHLTLFGRS- 147 (477)
Q Consensus 73 ILdGk~lA~~I~~~lk~~v~~lk~~~g---~~-P~LaiI~vGdd~aS~~Yv~~k~k~a~~vGI~~~~~~~lp~~~~t~e- 147 (477)
+|+-..+..+=.+.|-+...++|+... .+ ..++.|.. .|+.+ ---+=..++.++|..+. .+. +.++ +..
T Consensus 38 lLsi~dls~~ei~~ll~~A~~lk~~~~~~~L~gK~la~lF~--epSTR-TR~SFE~A~~~LGg~vi-~l~-~~~s-s~~k 111 (340)
T 4ep1_A 38 LLTLEELTQEEIISLIEFAIYLKKNKQEPLLQGKILGLIFD--KHSTR-TRVSFEAGMVQLGGHGM-FLN-GKEM-QMGR 111 (340)
T ss_dssp BSSGGGSCHHHHHHHHHHHHHHHHSCCCCTTTTCEEEEEES--SCCHH-HHHHHHHHHHHTTCEEE-EEE-SCC------
T ss_pred ccchhhCCHHHHHHHHHHHHHHHhcccccccCCceEEEEec--CCCcc-HHHHHHHHHHHcCCeEE-EcC-cccc-cCCC
Confidence 444444444333444455555654321 11 24555443 23332 22344788999999887 554 3232 111
Q ss_pred -----hhhccccCCCCCCccEEEEcCCCCCCCcHHHHHhhcCCCCCCCCCCccchHHhhcCCCCcccCCHHH-HHHHHHH
Q psy4615 148 -----KLINPMSIPISTGVSSHISQLPLPEHMVERAVCNAVAPHKDVDGFNIVNVGRFCLDLKTLIPCTPLG-VQELIRR 221 (477)
Q Consensus 148 -----~~I~~L~~N~D~~V~GILVqlPLP~~ld~~~l~~aI~p~KDVDGl~p~nlg~l~~g~~~f~PcTa~A-v~~Lle~ 221 (477)
+.++-| +. -+|+|++--| .+-..+.+.+.. +++-+|.| .....||=+.+ ++.+.|+
T Consensus 112 gEsl~DTarvL--s~--y~D~IviR~~--~~~~~~~lA~~~-------~vPVINag-----~~~~HPtQaLaDl~TI~E~ 173 (340)
T 4ep1_A 112 GETVSDTAKVL--SH--YIDGIMIRTF--SHADVEELAKES-------SIPVINGL-----TDDHHPCQALADLMTIYEE 173 (340)
T ss_dssp -CCTTHHHHHH--HH--HCSEEEEECS--CHHHHHHHHHHC-------SSCEEEEE-----CSSCCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHH--HH--hCCEEEEecC--ChhHHHHHHHhC-------CCCEEeCC-----CCCCCcHHHHHHHHHHHHH
Confidence 333333 22 2789998755 333333333332 34556643 34788998887 6788888
Q ss_pred hCCCCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 222 YKVETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 222 ~gi~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
.| .++|++++++|-.+.|..-+...+..-|+++
T Consensus 174 ~G-~l~glkva~vGD~~nva~Sl~~~~~~~G~~v 206 (340)
T 4ep1_A 174 TN-TFKGIKLAYVGDGNNVCHSLLLASAKVGMHM 206 (340)
T ss_dssp HS-CCTTCEEEEESCCCHHHHHHHHHHHHHTCEE
T ss_pred hC-CCCCCEEEEECCCchhHHHHHHHHHHcCCEE
Confidence 87 5899999999987667777777776667644
No 70
>3h75_A Periplasmic sugar-binding domain protein; protein structure initiative II (PSI II), sugar binding PROT alpha/beta fold; 1.60A {Pseudomonas fluorescens pf-5}
Probab=52.19 E-value=30 Score=33.15 Aligned_cols=63 Identities=8% Similarity=-0.033 Sum_probs=44.3
Q ss_pred CCEEEEEEeCCC--hhhHHHHHHHHHHHHHcCCeeeeeEEecCCcccHH-hhhccccCCCC-CCccEEEEc
Q psy4615 101 VPTLTAILVGND--SASSTYVNNKMKSAAKVGEVNALGVLYHLTLFGRS-KLINPMSIPIS-TGVSSHISQ 167 (477)
Q Consensus 101 ~P~LaiI~vGdd--~aS~~Yv~~k~k~a~~vGI~~~~~~~lp~~~~t~e-~~I~~L~~N~D-~~V~GILVq 167 (477)
++++++|.-+.. +--....+...++|++.|+++. ...-..+. ..+ +.|+.+ -.. .++|||++.
T Consensus 3 ~~~Ig~i~p~~~~~~f~~~~~~g~~~~a~~~g~~~~-~~~~~~~~-~~~~~~i~~~--i~~~~~vDgiIi~ 69 (350)
T 3h75_A 3 LTSVVFLNPGNSTETFWVSYSQFMQAAARDLGLDLR-ILYAERDP-QNTLQQAREL--FQGRDKPDYLMLV 69 (350)
T ss_dssp CCEEEEEECSCTTCHHHHHHHHHHHHHHHHHTCEEE-EEECTTCH-HHHHHHHHHH--HHSSSCCSEEEEE
T ss_pred CCEEEEECCCCCCChHHHHHHHHHHHHHHHcCCeEE-EEECCCCH-HHHHHHHHHH--HhcCCCCCEEEEe
Confidence 567888876542 4456677888999999999998 66544444 222 667766 443 579999995
No 71
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=52.09 E-value=18 Score=35.14 Aligned_cols=114 Identities=18% Similarity=0.127 Sum_probs=66.8
Q ss_pred HHHHHHcCCeeeeeEEecCCcccHHhhhccccCCCCCCccEEEEcCCCCC-------CCcH-HHHHhhcCCCC-CCCC-C
Q psy4615 123 MKSAAKVGEVNALGVLYHLTLFGRSKLINPMSIPISTGVSSHISQLPLPE-------HMVE-RAVCNAVAPHK-DVDG-F 192 (477)
Q Consensus 123 ~k~a~~vGI~~~~~~~lp~~~~t~e~~I~~L~~N~D~~V~GILVqlPLP~-------~ld~-~~l~~aI~p~K-DVDG-l 192 (477)
-.++++.|++.. ...++-..+..++.++.+ ...+++.|.-|-+|.-. .+++ .+...+++.-+ +-|| +
T Consensus 26 n~~f~~~gl~~~-Y~~~~v~~~~l~~~~~~l--~~~~~~~G~nVTiP~K~~~~~~lD~ls~~A~~iGAVNTi~~~~dG~l 102 (269)
T 3tum_A 26 NTWFNHNNCNLA-MLPIDLHEAALDSFADTL--RGWQNLRGCVVTVPYKQALANRVDGLSERAAALGSINVIRRERDGRL 102 (269)
T ss_dssp HHHHHHTTCSEE-EEEEEBCGGGHHHHHHHH--HHBTTEEEEEECTTCHHHHHTTSSEECHHHHHHTCCSEEEECTTSCE
T ss_pred HHHHHHcCCCeE-EEEeecCHhhHHHHHHHH--HhccCCCeeEeccccHHHHHHHhccCCHHHHHcCceeEEEECCCCEE
Confidence 445788999877 554432220122455555 44467899999999531 1221 12233332210 1122 1
Q ss_pred CccchHHhhcCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEECCCCCcchHHHHHhhhCCC
Q psy4615 193 NIVNVGRFCLDLKTLIPCTPLGVQELIRRYKVETFGKNAVVCGRSKNVGMPIAMLLHADGA 253 (477)
Q Consensus 193 ~p~nlg~l~~g~~~f~PcTa~Av~~Lle~~gi~l~Gk~vvViGrS~~VGkPLA~lL~~~~a 253 (477)
.-.| .-..|+++.|++.+++..||+++|+|.... ++..+.-|+..+.
T Consensus 103 ~G~N-------------TD~~Gf~~~L~~~g~~~~~~~~lilGaGGa-arai~~aL~~~g~ 149 (269)
T 3tum_A 103 LGDN-------------VDGAGFLGAAHKHGFEPAGKRALVIGCGGV-GSAIAYALAEAGI 149 (269)
T ss_dssp EEEC-------------CHHHHHHHHHHHTTCCCTTCEEEEECCSHH-HHHHHHHHHHTTC
T ss_pred EEEE-------------cChHHHHHHHHHhCCCcccCeEEEEecHHH-HHHHHHHHHHhCC
Confidence 1111 134588899999999999999999995543 6667777777665
No 72
>3kjx_A Transcriptional regulator, LACI family; LACL family, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.33A {Silicibacter pomeroyi}
Probab=51.40 E-value=34 Score=32.69 Aligned_cols=61 Identities=10% Similarity=-0.026 Sum_probs=40.9
Q ss_pred CEEEEEEeC-CChhhHHHHHHHHHHHHHcCCeeeeeEEecCCcccHH-hhhccccCCCCCCccEEEEc
Q psy4615 102 PTLTAILVG-NDSASSTYVNNKMKSAAKVGEVNALGVLYHLTLFGRS-KLINPMSIPISTGVSSHISQ 167 (477)
Q Consensus 102 P~LaiI~vG-dd~aS~~Yv~~k~k~a~~vGI~~~~~~~lp~~~~t~e-~~I~~L~~N~D~~V~GILVq 167 (477)
..+++|.-. .++--...++...+.|++.|..+. ......+. ..+ +.++.+ . ...|||||+.
T Consensus 69 ~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~-~~~~~~~~-~~~~~~i~~l--~-~~~vdGiIi~ 131 (344)
T 3kjx_A 69 NLVAVIIPSLSNMVFPEVLTGINQVLEDTELQPV-VGVTDYLP-EKEEKVLYEM--L-SWRPSGVIIA 131 (344)
T ss_dssp SEEEEEESCSSSSSHHHHHHHHHHHHTSSSSEEE-EEECTTCH-HHHHHHHHHH--H-TTCCSEEEEE
T ss_pred CEEEEEeCCCCcHHHHHHHHHHHHHHHHCCCEEE-EEeCCCCH-HHHHHHHHHH--H-hCCCCEEEEE
Confidence 356666543 244446667889999999999988 66554444 223 667766 3 3479999995
No 73
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=51.27 E-value=14 Score=37.51 Aligned_cols=46 Identities=24% Similarity=0.374 Sum_probs=37.1
Q ss_pred cCCHHH----HHHHHHH-hCC-CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 209 PCTPLG----VQELIRR-YKV-ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 209 PcTa~A----v~~Lle~-~gi-~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
+.|+.+ +.+++++ +|. ++.||+++|+| .-.||..+|..|...++.|
T Consensus 148 ~aTg~GV~~~~~~~~~~~~G~~~L~GktV~V~G-~G~VG~~~A~~L~~~GakV 199 (364)
T 1leh_A 148 PVTAYGVYRGMKAAAKEAFGSDSLEGLAVSVQG-LGNVAKALCKKLNTEGAKL 199 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEE
T ss_pred cchhhHHHHHHHHHHHhhccccCCCcCEEEEEC-chHHHHHHHHHHHHCCCEE
Confidence 567775 4566666 487 89999999999 5567999999999999854
No 74
>3e61_A Putative transcriptional repressor of ribose OPER; structural genomics, DNA-binding, transcripti regulation, PSI-2; 2.00A {Staphylococcus saprophyticus subsp}
Probab=50.93 E-value=37 Score=30.94 Aligned_cols=63 Identities=10% Similarity=-0.006 Sum_probs=42.0
Q ss_pred CCCEEEEEEeC-CChhhHHHHHHHHHHHHHcCCeeeeeEEecCCcccHH-hhhccccCCCCCCccEEEEc
Q psy4615 100 RVPTLTAILVG-NDSASSTYVNNKMKSAAKVGEVNALGVLYHLTLFGRS-KLINPMSIPISTGVSSHISQ 167 (477)
Q Consensus 100 ~~P~LaiI~vG-dd~aS~~Yv~~k~k~a~~vGI~~~~~~~lp~~~~t~e-~~I~~L~~N~D~~V~GILVq 167 (477)
+...+++|.-. +++-...+++...+.|++.|..+. .+....+. ..+ +.++.+ . ...++||++.
T Consensus 7 ~~~~Ig~i~~~~~~~~~~~~~~gi~~~~~~~g~~~~-~~~~~~~~-~~~~~~~~~l--~-~~~~dgiIi~ 71 (277)
T 3e61_A 7 KSKLIGLLLPDMSNPFFTLIARGVEDVALAHGYQVL-IGNSDNDI-KKAQGYLATF--V-SHNCTGMIST 71 (277)
T ss_dssp ---CEEEEESCTTSHHHHHHHHHHHHHHHHTTCCEE-EEECTTCH-HHHHHHHHHH--H-HTTCSEEEEC
T ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEE-EEeCCCCH-HHHHHHHHHH--H-hCCCCEEEEe
Confidence 34567777654 345556677888999999999988 76655554 223 666665 3 3469999995
No 75
>1pg5_A Aspartate carbamoyltransferase; 2.60A {Sulfolobus acidocaldarius} SCOP: c.78.1.1 c.78.1.1 PDB: 2be9_A*
Probab=50.09 E-value=1.4e+02 Score=29.51 Aligned_cols=131 Identities=11% Similarity=0.030 Sum_probs=79.6
Q ss_pred EEEEEEeCCChhhHHHHHHHHHHHHHcCCeeeeeEEecCCc-----ccHHhhhccccCCCCCCccEEEEcCCCCCCCcHH
Q psy4615 103 TLTAILVGNDSASSTYVNNKMKSAAKVGEVNALGVLYHLTL-----FGRSKLINPMSIPISTGVSSHISQLPLPEHMVER 177 (477)
Q Consensus 103 ~LaiI~vGdd~aS~~Yv~~k~k~a~~vGI~~~~~~~lp~~~-----~t~e~~I~~L~~N~D~~V~GILVqlPLP~~ld~~ 177 (477)
.++.|..- | |..---+=..++.++|.++. .+.-++.+ |+-++.++-| +.= +|+|++-.| .|-..+
T Consensus 40 ~~~~lF~e--~-STRTR~SFe~A~~~LGg~~i-~l~~~~~s~~~kgEsl~DTarvl--s~~--~D~iviR~~--~~~~~~ 109 (299)
T 1pg5_A 40 TISIAFFE--P-STRTYLSFQKAIINLGGDVI-GFSGEESTSVAKGENLADTIRML--NNY--SDGIVMRHK--YDGASR 109 (299)
T ss_dssp EEEEEESS--C-CHHHHHHHHHHHHHTTCEEE-EEECC-------CCCHHHHHHHH--HHH--CSEEEEEES--SBTHHH
T ss_pred EEEEEecC--C-CcchHHhHHHHHHHhCCEEE-EeCCCCcccccCCCCHHHHHHHH--HHh--CCEEEEeCC--ChhHHH
Confidence 45555553 2 33333455789999999877 55422211 0111444433 221 689999866 344444
Q ss_pred HHHhhcCCCCCCCCCCccchHHhhcCCCCcccCCHHH-HHHHHHHhCCCCCCCeEEEECCC--CCcchHHHHHhhhC-CC
Q psy4615 178 AVCNAVAPHKDVDGFNIVNVGRFCLDLKTLIPCTPLG-VQELIRRYKVETFGKNAVVCGRS--KNVGMPIAMLLHAD-GA 253 (477)
Q Consensus 178 ~l~~aI~p~KDVDGl~p~nlg~l~~g~~~f~PcTa~A-v~~Lle~~gi~l~Gk~vvViGrS--~~VGkPLA~lL~~~-~a 253 (477)
.+.+.. +.+-+|.|- ...+.||-+.| ++.+.|+.| +++|++++++|-. .-|..-+...+..- |+
T Consensus 110 ~la~~~-------~vPVINaG~----g~~~HPtQ~LaDl~Ti~e~~g-~l~gl~va~vGD~~~~rva~Sl~~~~~~~~g~ 177 (299)
T 1pg5_A 110 FASEIS-------DIPVINAGD----GKHEHPTQAVIDIYTINKHFN-TIDGLVFALLGDLKYARTVNSLLRILTRFRPK 177 (299)
T ss_dssp HHHHHC-------SSCEEEEEE----TTTBCHHHHHHHHHHHHHHHS-CSTTCEEEEEECCSSCHHHHHHHHHGGGSCCS
T ss_pred HHHHhC-------CCCEEeCCC----CCCcCcHHHHHHHHHHHHHhC-CcCCcEEEEECCCCCCchHHHHHHHHHhCCCC
Confidence 554432 245566321 24688998886 677777777 7999999999974 45667777777766 76
Q ss_pred Cc
Q psy4615 254 GV 255 (477)
Q Consensus 254 ~v 255 (477)
++
T Consensus 178 ~v 179 (299)
T 1pg5_A 178 LV 179 (299)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 76
>3k9c_A Transcriptional regulator, LACI family protein; PSI-II, 11026W, structural genomics, PR structure initiative; 2.14A {Rhodococcus jostii}
Probab=49.64 E-value=63 Score=29.85 Aligned_cols=64 Identities=8% Similarity=-0.051 Sum_probs=45.3
Q ss_pred CCCEEEEEEeCCChhhHHHHHHHHHHHHHcCCeeeeeEEecCCcccHHhhhccccCCCCCCccEEEEcC
Q psy4615 100 RVPTLTAILVGNDSASSTYVNNKMKSAAKVGEVNALGVLYHLTLFGRSKLINPMSIPISTGVSSHISQL 168 (477)
Q Consensus 100 ~~P~LaiI~vGdd~aS~~Yv~~k~k~a~~vGI~~~~~~~lp~~~~t~e~~I~~L~~N~D~~V~GILVql 168 (477)
+...+++|.--.++--...++...+.|++.|..+. ......+. .+.+.++.+ . ..+|||||+.-
T Consensus 11 ~~~~Igvi~~~~~~~~~~~~~gi~~~a~~~g~~~~-~~~~~~~~-~~~~~~~~l--~-~~~vdgiIi~~ 74 (289)
T 3k9c_A 11 SSRLLGVVFELQQPFHGDLVEQIYAAATRRGYDVM-LSAVAPSR-AEKVAVQAL--M-RERCEAAILLG 74 (289)
T ss_dssp --CEEEEEEETTCHHHHHHHHHHHHHHHHTTCEEE-EEEEBTTB-CHHHHHHHH--T-TTTEEEEEEET
T ss_pred CCCEEEEEEecCCchHHHHHHHHHHHHHHCCCEEE-EEeCCCCH-HHHHHHHHH--H-hCCCCEEEEEC
Confidence 45567777733455556677889999999999998 77766665 444777777 3 35799999964
No 77
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=49.35 E-value=9.7 Score=35.40 Aligned_cols=33 Identities=27% Similarity=0.421 Sum_probs=28.8
Q ss_pred CCCCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 223 KVETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 223 gi~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
-.++.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 14 ~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V 46 (249)
T 1o5i_A 14 ELGIRDKGVLVLAASRGIGRAVADVLSQEGAEV 46 (249)
T ss_dssp --CCTTCEEEEESCSSHHHHHHHHHHHHTTCEE
T ss_pred HhccCCCEEEEECCCCHHHHHHHHHHHHCCCEE
Confidence 357899999999999999999999999999854
No 78
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=49.32 E-value=1.3e+02 Score=29.99 Aligned_cols=128 Identities=13% Similarity=0.023 Sum_probs=78.6
Q ss_pred EEEEEEeCCChhhHHHHHHHHHHHHHcCCeeeeeEEecCCcccHH------hhhccccCCCCCCccEEEEcCCCCCCCcH
Q psy4615 103 TLTAILVGNDSASSTYVNNKMKSAAKVGEVNALGVLYHLTLFGRS------KLINPMSIPISTGVSSHISQLPLPEHMVE 176 (477)
Q Consensus 103 ~LaiI~vGdd~aS~~Yv~~k~k~a~~vGI~~~~~~~lp~~~~t~e------~~I~~L~~N~D~~V~GILVqlPLP~~ld~ 176 (477)
.++.|..- |+.+ ---+=..++.++|.++. .+. +.++ +.. +.++-| +.= +|+|++-.| .|-..
T Consensus 38 ~la~lF~e--~STR-TR~SFe~A~~~LGg~~i-~l~-~~~s-s~~kgEsl~DTarvl--s~~--~D~iviR~~--~~~~~ 105 (307)
T 3tpf_A 38 TLAMIFEK--NSTR-TRMAFELAITELGGKAL-FLS-SNDL-QLSRGEPVKDTARVI--GAM--VDFVMMRVN--KHETL 105 (307)
T ss_dssp EEEEEESS--CCHH-HHHHHHHHHHHTTCEEE-EEC-TTTC-CTTTSSCHHHHHHHH--HHH--SSEEEEECS--CHHHH
T ss_pred EEEEEecC--CCcc-hHHhHHHHHHHcCCeEE-EcC-cccc-cCCCCCCHHHHHHHH--HHh--CCEEEEecC--ChHHH
Confidence 45555442 2322 23344788999999887 543 3222 111 444434 222 789999755 33333
Q ss_pred HHHHhhcCCCCCCCCCCccchHHhhcCCCCcccCCHHH-HHHHHHHhCCCCC-CCeEEEECCCCCcchHHHHHhhhCCCC
Q psy4615 177 RAVCNAVAPHKDVDGFNIVNVGRFCLDLKTLIPCTPLG-VQELIRRYKVETF-GKNAVVCGRSKNVGMPIAMLLHADGAG 254 (477)
Q Consensus 177 ~~l~~aI~p~KDVDGl~p~nlg~l~~g~~~f~PcTa~A-v~~Lle~~gi~l~-Gk~vvViGrS~~VGkPLA~lL~~~~a~ 254 (477)
..+.+.. +.+-+|.| .....||=+.+ ++.+.|+.| .++ |++++++|-.+.|..-+...+..-|++
T Consensus 106 ~~lA~~~-------~vPVINag-----~~~~HPtQaLaDl~Ti~e~~g-~l~~gl~va~vGD~~~va~Sl~~~~~~~G~~ 172 (307)
T 3tpf_A 106 LEFARYS-------KAPVINAL-----SELYHPTQVLGDLFTIKEWNK-MQNGIAKVAFIGDSNNMCNSWLITAAILGFE 172 (307)
T ss_dssp HHHHHHC-------SSCEEEEE-----CSSCCHHHHHHHHHHHHHTTC-CGGGCCEEEEESCSSHHHHHHHHHHHHHTCE
T ss_pred HHHHHhC-------CCCEEeCC-----CCCcCcHHHHHHHHHHHHHhC-CCCCCCEEEEEcCCCccHHHHHHHHHHcCCE
Confidence 3333322 34556643 45788998887 677777777 789 999999998777777777777666664
Q ss_pred c
Q psy4615 255 V 255 (477)
Q Consensus 255 v 255 (477)
+
T Consensus 173 v 173 (307)
T 3tpf_A 173 I 173 (307)
T ss_dssp E
T ss_pred E
Confidence 3
No 79
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=49.24 E-value=8.1 Score=37.07 Aligned_cols=30 Identities=37% Similarity=0.500 Sum_probs=27.6
Q ss_pred CCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 226 TFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 226 l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
|+||.++|+|.+.=+|+-+|..|+.+|+.|
T Consensus 9 f~GK~alVTGas~GIG~aia~~la~~Ga~V 38 (242)
T 4b79_A 9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEV 38 (242)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEE
Confidence 589999999999999999999999999843
No 80
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=49.20 E-value=5.2 Score=37.49 Aligned_cols=48 Identities=33% Similarity=0.371 Sum_probs=36.1
Q ss_pred CCCCcccCCHHHHHHHHHHhCCCCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 203 DLKTLIPCTPLGVQELIRRYKVETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 203 g~~~f~PcTa~Av~~Lle~~gi~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
+.+...||+....+.+ .++.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 14 ~~~~~~~~~~~~~~~~-----~~l~~k~vlITGasggIG~~la~~L~~~G~~V 61 (279)
T 3ctm_A 14 PLPTKAPTLSKNVLDL-----FSLKGKVASVTGSSGGIGWAVAEAYAQAGADV 61 (279)
T ss_dssp SSSCCCCCCCSSGGGG-----GCCTTCEEEETTTTSSHHHHHHHHHHHHTCEE
T ss_pred CCCCCccccccccccc-----cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEE
Confidence 4445556554433333 25789999999999999999999999998854
No 81
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=48.73 E-value=11 Score=36.31 Aligned_cols=33 Identities=24% Similarity=0.289 Sum_probs=29.9
Q ss_pred CCCCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 223 KVETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 223 gi~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
+.+|+||.++|+|.+.=+|+-.|..|+.+++.|
T Consensus 2 ~~~L~gKvalVTGas~GIG~aia~~la~~Ga~V 34 (258)
T 4gkb_A 2 DLNLQDKVVIVTGGASGIGGAISMRLAEERAIP 34 (258)
T ss_dssp CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEE
T ss_pred CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEE
Confidence 357899999999999999999999999999854
No 82
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=48.68 E-value=15 Score=38.08 Aligned_cols=49 Identities=24% Similarity=0.266 Sum_probs=40.3
Q ss_pred CcccCCHHHHH----HHHHHhCCC-CCCCeEEEECCCCCcchHHHHHhhh-CCCCc
Q psy4615 206 TLIPCTPLGVQ----ELIRRYKVE-TFGKNAVVCGRSKNVGMPIAMLLHA-DGAGV 255 (477)
Q Consensus 206 ~f~PcTa~Av~----~Lle~~gi~-l~Gk~vvViGrS~~VGkPLA~lL~~-~~a~v 255 (477)
...++|+.++. +.+++.|.+ +.||++.|+| .-.||+-+|.+|.. .++.|
T Consensus 185 ~~~~aTg~Gv~~~~~~~~~~~G~~~l~gktvgI~G-~G~VG~~vA~~l~~~~G~kV 239 (419)
T 1gtm_A 185 GRIEATARGASYTIREAAKVLGWDTLKGKTIAIQG-YGNAGYYLAKIMSEDFGMKV 239 (419)
T ss_dssp TTTTHHHHHHHHHHHHHHHHTTCSCSTTCEEEEEC-CSHHHHHHHHHHHHTTCCEE
T ss_pred CCCcchhhHHHHHHHHHHHHhCCcccCCCEEEEEc-CCHHHHHHHHHHHHhcCCEE
Confidence 45578999765 455668999 9999999999 77789999999998 88744
No 83
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=48.03 E-value=9.1 Score=35.87 Aligned_cols=31 Identities=26% Similarity=0.379 Sum_probs=28.5
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
++.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 7 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V 37 (287)
T 3pxx_A 7 RVQDKVVLVTGGARGQGRSHAVKLAEEGADI 37 (287)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEE
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHCCCeE
Confidence 5789999999999999999999999999854
No 84
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=47.23 E-value=11 Score=34.19 Aligned_cols=32 Identities=38% Similarity=0.501 Sum_probs=28.9
Q ss_pred CCCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 224 VETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 224 i~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
.++.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 3 ~~~~~~~vlVTGasggiG~~~a~~l~~~G~~V 34 (244)
T 1cyd_A 3 LNFSGLRALVTGAGKGIGRDTVKALHASGAKV 34 (244)
T ss_dssp CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEE
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEE
Confidence 35789999999999999999999999998854
No 85
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=47.08 E-value=8 Score=37.26 Aligned_cols=32 Identities=38% Similarity=0.500 Sum_probs=29.7
Q ss_pred CCCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 224 VETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 224 i~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
.+|+||.++|+|.+.=+|+-.|..|+.+|+.|
T Consensus 5 f~L~GKvalVTGas~GIG~aiA~~la~~Ga~V 36 (247)
T 4hp8_A 5 FSLEGRKALVTGANTGLGQAIAVGLAAAGAEV 36 (247)
T ss_dssp TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEE
T ss_pred cCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEE
Confidence 36899999999999999999999999999965
No 86
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=47.04 E-value=11 Score=35.38 Aligned_cols=32 Identities=34% Similarity=0.432 Sum_probs=29.3
Q ss_pred CCCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 224 VETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 224 i~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
-++.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 9 ~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V 40 (278)
T 3sx2_A 9 GPLTGKVAFITGAARGQGRAHAVRLAADGADI 40 (278)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEE
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHHCCCeE
Confidence 46899999999999999999999999999854
No 87
>3h5t_A Transcriptional regulator, LACI family; DNA-dependent, protein structure initiative II(PSI II), NYSGXRC, 11232D), structural genomics; 2.53A {Corynebacterium glutamicum}
Probab=46.61 E-value=22 Score=34.42 Aligned_cols=71 Identities=18% Similarity=0.128 Sum_probs=38.4
Q ss_pred HHHHhhhhcccCCCccccccccchHHHHHhhhcCCCCCCCCchhchHHHHH-HHHHHHHHHhcCCCCCCccccceecccc
Q psy4615 372 LAELSSRIQFTSPTVAEYTYFHPVLSILSYLCKAPLVPPGTPVVNALAQQR-SCIENILRACLSLPPENSMTLEHKLPRR 450 (477)
Q Consensus 372 l~~~~~r~~~~~~~~~~~~~~~~vl~~Ls~~fK~P~~~~g~~~~~~l~~Q~-~~l~~~~~~~~g~~~~~~~~~~~~~~~~ 450 (477)
+...+++.|++-+++-..-.|.-.-... ..|+ +++..+..++= .+.+-.++.+-|..+..+..+..++-.+
T Consensus 283 ~~~al~~~G~~vP~disvigfD~~~~~~----~~~l----ttv~q~~~~~G~~Av~~L~~~i~g~~~~~~~~l~~~Li~r 354 (366)
T 3h5t_A 283 VLEYLKSVGKSAPADLSLTGFDGTHMAL----ARDL----TTVIQPNKLKGFKAGETLLKMIDKEYVEPEVELETSFHPG 354 (366)
T ss_dssp HHHHHHHTTCCTTTTCEEEEEECCHHHH----HTTC----CEEECCHHHHHHHHHHHHHHHHTTCCCCSEEEECCEEECC
T ss_pred HHHHHHHcCCCCCCceEEEEECCChhhc----CCCc----cEEEeCHHHHHHHHHHHHHHHhcCCCCCceEEEccEEEEe
Confidence 4466678888754554455555433211 2356 56666666643 4455555666676444455555554443
No 88
>3g85_A Transcriptional regulator (LACI family); transcription regulator, PSI-II, structural genomics structure initiative; 1.84A {Clostridium acetobutylicum atcc 824}
Probab=46.34 E-value=44 Score=30.62 Aligned_cols=65 Identities=11% Similarity=-0.061 Sum_probs=44.5
Q ss_pred CCCEEEEEEeC--CChhhHHHHHHHHHHHHHcCCeeeeeEEecCCcccHHhhhccccCCCCCCccEEEEcC
Q psy4615 100 RVPTLTAILVG--NDSASSTYVNNKMKSAAKVGEVNALGVLYHLTLFGRSKLINPMSIPISTGVSSHISQL 168 (477)
Q Consensus 100 ~~P~LaiI~vG--dd~aS~~Yv~~k~k~a~~vGI~~~~~~~lp~~~~t~e~~I~~L~~N~D~~V~GILVql 168 (477)
....+++|.-. .++--..+++...+.|++.|..+. .+....+.+.+.+.++.+ ....|+|||+.-
T Consensus 10 ~~~~Igvi~~~~~~~~~~~~~~~gi~~~a~~~g~~~~-~~~~~~~~~~~~~~~~~l---~~~~vdgiIi~~ 76 (289)
T 3g85_A 10 SKPTIALYWSSDISVNIISRFLRGLQSKLAKQNYNYN-VVICPYKTDCLHLEKGIS---KENSFDAAIIAN 76 (289)
T ss_dssp -CCEEEEEEETTSCGGGHHHHHHHHHHHHHHTTTCSE-EEEEEECTTCGGGCGGGS---TTTCCSEEEESS
T ss_pred CCceEEEEeccccchHHHHHHHHHHHHHHHHcCCeEE-EEecCCCchhHHHHHHHH---hccCCCEEEEec
Confidence 45678888762 455567778899999999999988 665443331223666666 345799999963
No 89
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=45.65 E-value=2.4e+02 Score=27.96 Aligned_cols=139 Identities=14% Similarity=0.087 Sum_probs=83.9
Q ss_pred EEEEEEeCCChhhHHHHHHHHHHHHHcCCeeeeeEEecCCcccHH-----hhhccccCCCCCCccEEEEcCCCCCCCcHH
Q psy4615 103 TLTAILVGNDSASSTYVNNKMKSAAKVGEVNALGVLYHLTLFGRS-----KLINPMSIPISTGVSSHISQLPLPEHMVER 177 (477)
Q Consensus 103 ~LaiI~vGdd~aS~~Yv~~k~k~a~~vGI~~~~~~~lp~~~~t~e-----~~I~~L~~N~D~~V~GILVqlPLP~~ld~~ 177 (477)
.++.|..- |+.+ ---+=..++.++|.++. .+.- .++.... +.++-| +.= +|+|++-.| .|-..+
T Consensus 41 ~l~~lF~e--~STR-TR~SFe~A~~~LGg~~i-~l~~-~~ss~~kgEsl~DTarvl--s~~--~D~iviR~~--~~~~~~ 109 (307)
T 2i6u_A 41 GVAVIFDK--NSTR-TRFSFELGIAQLGGHAV-VVDS-GSTQLGRDETLQDTAKVL--SRY--VDAIVWRTF--GQERLD 109 (307)
T ss_dssp EEEEEESS--CCSH-HHHHHHHHHHHTTCEEE-EEEG-GGSGGGGTCCHHHHHHHH--HHH--EEEEEEECS--SHHHHH
T ss_pred EEEEEecC--CCcc-hHHHHHHHHHHcCCeEE-EECC-ccccCCCCCCHHHHHHHH--HHh--CCEEEEecC--ChhHHH
Confidence 35555543 2222 22344788999999887 6652 2220111 344433 221 789988755 333333
Q ss_pred HHHhhcCCCCCCCCCCccchHHhhcCCCCcccCCHHH-HHHHHHHhCCCCCCCeEEEECCC-CCcchHHHHHhhhCCCCc
Q psy4615 178 AVCNAVAPHKDVDGFNIVNVGRFCLDLKTLIPCTPLG-VQELIRRYKVETFGKNAVVCGRS-KNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 178 ~l~~aI~p~KDVDGl~p~nlg~l~~g~~~f~PcTa~A-v~~Lle~~gi~l~Gk~vvViGrS-~~VGkPLA~lL~~~~a~v 255 (477)
.+.+.. +.+-+|. |.....||-+.+ ++.+.|+.| +++|.+++++|-. +-|..-+...+..-|+++
T Consensus 110 ~lA~~~-------~vPVINa-----~~~~~HPtQaLaDl~Ti~e~~g-~l~gl~va~vGD~~~rva~Sl~~~~~~~g~~v 176 (307)
T 2i6u_A 110 AMASVA-------TVPVINA-----LSDEFHPCQVLADLQTIAERKG-ALRGLRLSYFGDGANNMAHSLLLGGVTAGIHV 176 (307)
T ss_dssp HHHHHC-------SSCEEES-----CCSSCCHHHHHHHHHHHHHHHS-CCTTCEEEEESCTTSHHHHHHHHHHHHTTCEE
T ss_pred HHHhhC-------CCCEEcC-----CCCCcCccHHHHHHHHHHHHhC-CcCCeEEEEECCCCcCcHHHHHHHHHHCCCEE
Confidence 443332 3556673 346788998886 677777777 7999999999975 567777777777777754
Q ss_pred cccceEEccCCCCCCh
Q psy4615 256 SEVAGYITPVPGGVGP 271 (477)
Q Consensus 256 ~~~a~~iTPVpGGVGp 271 (477)
...+| -|-.|
T Consensus 177 ----~~~~P--~~~~~ 186 (307)
T 2i6u_A 177 ----TVAAP--EGFLP 186 (307)
T ss_dssp ----EEECC--TTSCC
T ss_pred ----EEECC--ccccC
Confidence 24455 44444
No 90
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=45.56 E-value=12 Score=35.00 Aligned_cols=31 Identities=32% Similarity=0.469 Sum_probs=28.6
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
++.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 5 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V 35 (255)
T 4eso_A 5 NYQGKKAIVIGGTHGMGLATVRRLVEGGAEV 35 (255)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEE
Confidence 5789999999999999999999999999854
No 91
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=44.87 E-value=12 Score=34.64 Aligned_cols=31 Identities=45% Similarity=0.612 Sum_probs=28.4
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
+++||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 3 ~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V 33 (247)
T 3rwb_A 3 RLAGKTALVTGAAQGIGKAIAARLAADGATV 33 (247)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEE
T ss_pred CcCCCEEEEECCCCHHHHHHHHHHHHCCCEE
Confidence 4789999999999999999999999999854
No 92
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=44.70 E-value=11 Score=34.16 Aligned_cols=32 Identities=31% Similarity=0.515 Sum_probs=28.9
Q ss_pred CCCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 224 VETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 224 i~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
+++.||.++|+|.+.-+|+.++..|+.+++.|
T Consensus 3 ~~~~~~~vlVtGasggiG~~la~~l~~~G~~V 34 (248)
T 2pnf_A 3 IKLQGKVSLVTGSTRGIGRAIAEKLASAGSTV 34 (248)
T ss_dssp CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEE
T ss_pred cccCCCEEEEECCCchHHHHHHHHHHHCCCEE
Confidence 46789999999999999999999999998754
No 93
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=44.60 E-value=11 Score=35.69 Aligned_cols=33 Identities=33% Similarity=0.359 Sum_probs=29.2
Q ss_pred CCCCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 223 KVETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 223 gi~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
.-++.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 9 ~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V 41 (269)
T 3vtz_A 9 MEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKV 41 (269)
T ss_dssp -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEE
T ss_pred ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEE
Confidence 347899999999999999999999999999854
No 94
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=44.52 E-value=13 Score=33.82 Aligned_cols=31 Identities=35% Similarity=0.478 Sum_probs=28.3
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
++.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 4 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V 34 (244)
T 3d3w_A 4 FLAGRRVLVTGAGKGIGRGTVQALHATGARV 34 (244)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCEE
T ss_pred ccCCcEEEEECCCcHHHHHHHHHHHHCCCEE
Confidence 5789999999999999999999999998854
No 95
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=44.48 E-value=13 Score=34.00 Aligned_cols=32 Identities=28% Similarity=0.406 Sum_probs=28.8
Q ss_pred CCCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 224 VETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 224 i~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
.++.||.++|+|.+.-+|+-++..|+++++.|
T Consensus 7 ~~~~~k~vlITGasggiG~~la~~l~~~G~~V 38 (254)
T 2wsb_A 7 FRLDGACAAVTGAGSGIGLEICRAFAASGARL 38 (254)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEE
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEE
Confidence 35789999999999999999999999998854
No 96
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=44.46 E-value=11 Score=36.18 Aligned_cols=31 Identities=23% Similarity=0.254 Sum_probs=28.9
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
+|+||.++|+|.+.=+|+-+|..|+.+++.|
T Consensus 4 sL~gKvalVTGas~GIG~aiA~~la~~Ga~V 34 (254)
T 4fn4_A 4 SLKNKVVIVTGAGSGIGRAIAKKFALNDSIV 34 (254)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHTTCEE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEE
Confidence 6899999999999999999999999999854
No 97
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=44.45 E-value=44 Score=30.66 Aligned_cols=67 Identities=7% Similarity=-0.120 Sum_probs=43.9
Q ss_pred CCCEEEEEEeC-CChhhHHHHHHHHHHHHHcCCeeeeeEEecCCcccHH-hhhccccCCCCCCccEEEEcCCCC
Q psy4615 100 RVPTLTAILVG-NDSASSTYVNNKMKSAAKVGEVNALGVLYHLTLFGRS-KLINPMSIPISTGVSSHISQLPLP 171 (477)
Q Consensus 100 ~~P~LaiI~vG-dd~aS~~Yv~~k~k~a~~vGI~~~~~~~lp~~~~t~e-~~I~~L~~N~D~~V~GILVqlPLP 171 (477)
...++++|.-. +++--....+...+.|++.|+++. .+....+. ..+ +.++.+ . ...++|||+.-.-+
T Consensus 7 ~~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~-~~~~~~~~-~~~~~~~~~l--~-~~~vdgiI~~~~~~ 75 (293)
T 3l6u_A 7 KRNIVGFTIVNDKHEFAQRLINAFKAEAKANKYEAL-VATSQNSR-ISEREQILEF--V-HLKVDAIFITTLDD 75 (293)
T ss_dssp --CEEEEEESCSCSHHHHHHHHHHHHHHHHTTCEEE-EEECSSCH-HHHHHHHHHH--H-HTTCSEEEEECSCT
T ss_pred CCcEEEEEEecCCcHHHHHHHHHHHHHHHHcCCEEE-EECCCCCH-HHHHHHHHHH--H-HcCCCEEEEecCCh
Confidence 45678877754 344455567888999999999998 66655444 222 666666 3 34699999974433
No 98
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=44.07 E-value=9.3 Score=35.97 Aligned_cols=32 Identities=25% Similarity=0.360 Sum_probs=26.5
Q ss_pred CCCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 224 VETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 224 i~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
.++.||.++|+|.+.-+|+-++..|+.+|+.|
T Consensus 23 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V 54 (260)
T 3gem_A 23 MTLSSAPILITGASQRVGLHCALRLLEHGHRV 54 (260)
T ss_dssp ----CCCEEESSTTSHHHHHHHHHHHHTTCCE
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEE
Confidence 35789999999999999999999999999865
No 99
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=43.78 E-value=13 Score=34.94 Aligned_cols=32 Identities=34% Similarity=0.578 Sum_probs=29.1
Q ss_pred CCCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 224 VETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 224 i~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
.+++||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V 33 (274)
T 3e03_A 2 LTLSGKTLFITGASRGIGLAIALRAARDGANV 33 (274)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEE
T ss_pred CCCCCcEEEEECCCChHHHHHHHHHHHCCCEE
Confidence 46799999999999999999999999999854
No 100
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=43.74 E-value=13 Score=34.12 Aligned_cols=32 Identities=28% Similarity=0.372 Sum_probs=29.1
Q ss_pred CCCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 224 VETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 224 i~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
.++.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 5 ~~~~~k~vlITGas~giG~~~a~~l~~~G~~V 36 (253)
T 3qiv_A 5 MRFENKVGIVTGSGGGIGQAYAEALAREGAAV 36 (253)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEE
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHHCCCEE
Confidence 46789999999999999999999999999854
No 101
>2ef0_A Ornithine carbamoyltransferase; TTHA1199, thermus thermophil structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=43.73 E-value=1.9e+02 Score=28.50 Aligned_cols=130 Identities=13% Similarity=0.045 Sum_probs=81.3
Q ss_pred EEEEEEeCCChhhHHHHHHHHHHHHHcCCeeeeeEEecCCc----ccHHhhhccccCCCCCCccEEEEcCCCCCCCcHHH
Q psy4615 103 TLTAILVGNDSASSTYVNNKMKSAAKVGEVNALGVLYHLTL----FGRSKLINPMSIPISTGVSSHISQLPLPEHMVERA 178 (477)
Q Consensus 103 ~LaiI~vGdd~aS~~Yv~~k~k~a~~vGI~~~~~~~lp~~~----~t~e~~I~~L~~N~D~~V~GILVqlPLP~~ld~~~ 178 (477)
.++.|..- .|..---+=..++.++|.++. .+.-.... |+-++.++-| +.= +|+|++-.| .|-..+.
T Consensus 47 ~~~~lF~e---~STRTR~SFe~A~~~LGg~~i-~l~~~~ss~~kgEsl~DTarvl--s~~--~D~iviR~~--~~~~~~~ 116 (301)
T 2ef0_A 47 VLALLFEK---PSLRTRTTLEVAMVHLGGHAV-YLDQKQVGIGEREPVRDVAKNL--ERF--VEGIAARVF--RHETVEA 116 (301)
T ss_dssp EEEEEESS---CCHHHHHHHHHHHHHTTCEEE-EEEGGGSCTTTCCCHHHHHHHH--TTT--CSEEEEECS--SHHHHHH
T ss_pred EEEEEecc---CCcchHHHHHHHHHHcCCeEE-EECCcccccCCCCchHHHHHHH--HHh--CCEEEEecC--ChHHHHH
Confidence 35555542 233333345789999999888 66532211 0111555555 333 689998765 3333334
Q ss_pred HHhhcCCCCCCCCCCccchHHhhcCCCCcccCCHHH-HHHHHHHhCCCCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 179 VCNAVAPHKDVDGFNIVNVGRFCLDLKTLIPCTPLG-VQELIRRYKVETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 179 l~~aI~p~KDVDGl~p~nlg~l~~g~~~f~PcTa~A-v~~Lle~~gi~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
+.+.. ..+-+|. |.....||-+.+ ++.+.|+.| .++|.+++++|-.+-|..-+...+..-|+++
T Consensus 117 la~~~-------~vPVINa-----~~~~~HPtQaLaDl~Ti~e~~g-~l~gl~ia~vGD~~rva~Sl~~~~~~~g~~v 181 (301)
T 2ef0_A 117 LARHA-------KVPVVNA-----LSDRAHPLQALADLLTLKEVFG-GLAGLEVAWVGDGNNVLNSLLEVAPLAGLKV 181 (301)
T ss_dssp HHHHC-------SSCEEEE-----ECSSCCHHHHHHHHHHHHHHHS-CCTTCEEEEESCCCHHHHHHHHHHHHHTCEE
T ss_pred HHHHC-------CCCEEeC-----CCCccCchHHHHHHHHHHHHhC-CcCCcEEEEECCCchhHHHHHHHHHHcCCEE
Confidence 43332 3555673 246788998886 677777777 7999999999986667777777776667654
No 102
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=43.70 E-value=13 Score=34.18 Aligned_cols=30 Identities=13% Similarity=0.160 Sum_probs=27.6
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCC
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAG 254 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~ 254 (477)
++.||.++|+|.+.-+|+-++..|+.+++.
T Consensus 2 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~ 31 (254)
T 1sby_A 2 DLTNKNVIFVAALGGIGLDTSRELVKRNLK 31 (254)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTCCS
T ss_pred CCCCcEEEEECCCChHHHHHHHHHHHCCCc
Confidence 468999999999999999999999999885
No 103
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=43.63 E-value=11 Score=34.80 Aligned_cols=31 Identities=35% Similarity=0.581 Sum_probs=28.0
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
+++||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 1 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V 31 (255)
T 2q2v_A 1 TLKGKTALVTGSTSGIGLGIAQVLARAGANI 31 (255)
T ss_dssp CCTTCEEEESSCSSHHHHHHHHHHHHTTCEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEE
Confidence 3689999999999999999999999999854
No 104
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=43.61 E-value=13 Score=34.44 Aligned_cols=31 Identities=35% Similarity=0.413 Sum_probs=28.5
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
++.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 6 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V 36 (260)
T 2ae2_A 6 NLEGCTALVTGGSRGIGYGIVEELASLGASV 36 (260)
T ss_dssp CCTTCEEEEESCSSHHHHHHHHHHHHTTCEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEE
Confidence 5789999999999999999999999999854
No 105
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=43.50 E-value=13 Score=34.51 Aligned_cols=31 Identities=29% Similarity=0.466 Sum_probs=28.4
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
++.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V 35 (259)
T 4e6p_A 5 RLEGKSALITGSARGIGRAFAEAYVREGATV 35 (259)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEE
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHCCCEE
Confidence 4789999999999999999999999999854
No 106
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=43.30 E-value=15 Score=34.10 Aligned_cols=32 Identities=34% Similarity=0.516 Sum_probs=28.9
Q ss_pred CCCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 224 VETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 224 i~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
.++.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V 34 (263)
T 3ai3_A 3 MGISGKVAVITGSSSGIGLAIAEGFAKEGAHI 34 (263)
T ss_dssp CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEE
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEE
Confidence 45789999999999999999999999999854
No 107
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=43.26 E-value=16 Score=33.95 Aligned_cols=32 Identities=34% Similarity=0.456 Sum_probs=28.3
Q ss_pred CCCCCCeEEEECCCCC--cchHHHHHhhhCCCCc
Q psy4615 224 VETFGKNAVVCGRSKN--VGMPIAMLLHADGAGV 255 (477)
Q Consensus 224 i~l~Gk~vvViGrS~~--VGkPLA~lL~~~~a~v 255 (477)
.+++||.++|+|.+.. +|+-++..|+.+++.|
T Consensus 3 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V 36 (266)
T 3oig_A 3 FSLEGRNIVVMGVANKRSIAWGIARSLHEAGARL 36 (266)
T ss_dssp SCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEE
T ss_pred cccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEE
Confidence 4678999999999966 9999999999999854
No 108
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=42.98 E-value=13 Score=35.11 Aligned_cols=32 Identities=34% Similarity=0.422 Sum_probs=29.4
Q ss_pred CCCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 224 VETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 224 i~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
.++.||.++|+|.+.-+|+-++..|+.+|+.|
T Consensus 27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V 58 (273)
T 3uf0_A 27 FSLAGRTAVVTGAGSGIGRAIAHGYARAGAHV 58 (273)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEE
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEE
Confidence 46899999999999999999999999999854
No 109
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=42.89 E-value=14 Score=34.18 Aligned_cols=31 Identities=35% Similarity=0.494 Sum_probs=28.3
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
++.||.++|+|.+.-+|+.++..|+.+++.|
T Consensus 4 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V 34 (250)
T 2fwm_X 4 DFSGKNVWVTGAGKGIGYATALAFVEAGAKV 34 (250)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEE
Confidence 5789999999999999999999999999854
No 110
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=42.69 E-value=34 Score=31.36 Aligned_cols=63 Identities=8% Similarity=-0.077 Sum_probs=41.9
Q ss_pred CCCEEEEEEeC------CChhhHHHHHHHHHHHHHcCCeeeeeEEecCCcccHH-hhhccccCCCCCCccEEEEc
Q psy4615 100 RVPTLTAILVG------NDSASSTYVNNKMKSAAKVGEVNALGVLYHLTLFGRS-KLINPMSIPISTGVSSHISQ 167 (477)
Q Consensus 100 ~~P~LaiI~vG------dd~aS~~Yv~~k~k~a~~vGI~~~~~~~lp~~~~t~e-~~I~~L~~N~D~~V~GILVq 167 (477)
...++++|.-. .++--...++...+.|++.|.++. ......+. ..+ +.++.+ . ...|+||++.
T Consensus 7 ~~~~Igvi~~~~~~~~~~~~~~~~~~~gi~~~a~~~g~~~~-~~~~~~~~-~~~~~~~~~~--~-~~~vdgiIi~ 76 (292)
T 3k4h_A 7 TTKTLGLVMPSSASKAFQNPFFPEVIRGISSFAHVEGYALY-MSTGETEE-EIFNGVVKMV--Q-GRQIGGIILL 76 (292)
T ss_dssp CCCEEEEECSSCHHHHTTSTHHHHHHHHHHHHHHHTTCEEE-ECCCCSHH-HHHHHHHHHH--H-TTCCCEEEES
T ss_pred CCCEEEEEecCCccccccCHHHHHHHHHHHHHHHHcCCEEE-EEeCCCCH-HHHHHHHHHH--H-cCCCCEEEEe
Confidence 56678877765 455556677888999999999887 54433332 122 555555 2 3479999995
No 111
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=42.61 E-value=14 Score=34.30 Aligned_cols=31 Identities=42% Similarity=0.606 Sum_probs=28.4
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
++.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 9 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V 39 (263)
T 3ak4_A 9 DLSGRKAIVTGGSKGIGAAIARALDKAGATV 39 (263)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEE
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEE
Confidence 5789999999999999999999999999854
No 112
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=42.54 E-value=14 Score=35.34 Aligned_cols=32 Identities=22% Similarity=0.513 Sum_probs=29.2
Q ss_pred CCCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 224 VETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 224 i~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
.+++||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 43 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V 74 (291)
T 3ijr_A 43 EKLKGKNVLITGGDSGIGRAVSIAFAKEGANI 74 (291)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHHHTTCEE
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEE
Confidence 36899999999999999999999999999854
No 113
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=42.51 E-value=14 Score=34.32 Aligned_cols=31 Identities=29% Similarity=0.434 Sum_probs=28.2
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
++.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V 32 (254)
T 1hdc_A 2 DLSGKTVIITGGARGLGAEAARQAVAAGARV 32 (254)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHTTCEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEE
Confidence 4689999999999999999999999999854
No 114
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=42.48 E-value=14 Score=34.86 Aligned_cols=33 Identities=39% Similarity=0.567 Sum_probs=29.8
Q ss_pred CCCCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 223 KVETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 223 gi~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
..+++||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 26 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V 58 (271)
T 3v2g_A 26 SISLAGKTAFVTGGSRGIGAAIAKRLALEGAAV 58 (271)
T ss_dssp TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEE
T ss_pred ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEE
Confidence 357899999999999999999999999999854
No 115
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=42.46 E-value=15 Score=34.59 Aligned_cols=31 Identities=23% Similarity=0.320 Sum_probs=26.9
Q ss_pred CCCCCeEEEECCCC--CcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSK--NVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~--~VGkPLA~lL~~~~a~v 255 (477)
+|+||.++|+|.+. =+|+-+|..|+.+|+.|
T Consensus 3 ~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~V 35 (256)
T 4fs3_A 3 NLENKTYVIMGIANKRSIAFGVAKVLDQLGAKL 35 (256)
T ss_dssp CCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEE
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEE
Confidence 68999999999653 57999999999999955
No 116
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=42.44 E-value=12 Score=34.66 Aligned_cols=31 Identities=45% Similarity=0.569 Sum_probs=28.7
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
+++||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 6 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V 36 (248)
T 3op4_A 6 NLEGKVALVTGASRGIGKAIAELLAERGAKV 36 (248)
T ss_dssp CCTTCEEEESSCSSHHHHHHHHHHHHTTCEE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEE
Confidence 5789999999999999999999999999855
No 117
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=42.42 E-value=14 Score=34.75 Aligned_cols=31 Identities=29% Similarity=0.497 Sum_probs=28.6
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
+++||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 7 ~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V 37 (281)
T 3s55_A 7 DFEGKTALITGGARGMGRSHAVALAEAGADI 37 (281)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEE
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCeE
Confidence 5789999999999999999999999999854
No 118
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=42.33 E-value=14 Score=34.98 Aligned_cols=31 Identities=26% Similarity=0.305 Sum_probs=28.5
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
++.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 13 ~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V 43 (291)
T 3rd5_A 13 SFAQRTVVITGANSGLGAVTARELARRGATV 43 (291)
T ss_dssp CCTTCEEEEECCSSHHHHHHHHHHHHTTCEE
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEE
Confidence 5789999999999999999999999999844
No 119
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=42.30 E-value=12 Score=39.78 Aligned_cols=41 Identities=39% Similarity=0.393 Sum_probs=34.2
Q ss_pred HHHHHHHHhCCCCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 214 GVQELIRRYKVETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 214 Av~~Lle~~gi~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
.+-.+.+..+..+.||.++|+|-+ -+|+.+|..|...|+.|
T Consensus 251 l~dgi~r~tg~~L~GKtVvVtGaG-gIG~aiA~~Laa~GA~V 291 (488)
T 3ond_A 251 LPDGLMRATDVMIAGKVAVVAGYG-DVGKGCAAALKQAGARV 291 (488)
T ss_dssp HHHHHHHHHCCCCTTCEEEEECCS-HHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHcCCcccCCEEEEECCC-HHHHHHHHHHHHCCCEE
Confidence 334445667899999999999987 89999999999999854
No 120
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=42.27 E-value=14 Score=34.16 Aligned_cols=31 Identities=26% Similarity=0.433 Sum_probs=28.4
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
++.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V 34 (257)
T 3tpc_A 4 QLKSRVFIVTGASSGLGAAVTRMLAQEGATV 34 (257)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCEE
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEE
Confidence 5789999999999999999999999999854
No 121
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=42.24 E-value=14 Score=34.46 Aligned_cols=31 Identities=26% Similarity=0.472 Sum_probs=28.6
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
++.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 5 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V 35 (259)
T 3edm_A 5 RFTNRTIVVAGAGRDIGRACAIRFAQEGANV 35 (259)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEE
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEE
Confidence 5789999999999999999999999999854
No 122
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=42.23 E-value=14 Score=34.59 Aligned_cols=32 Identities=22% Similarity=0.256 Sum_probs=29.1
Q ss_pred CCCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 224 VETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 224 i~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
.++.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 7 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V 38 (262)
T 3ksu_A 7 HDLKNKVIVIAGGIKNLGALTAKTFALESVNL 38 (262)
T ss_dssp SCCTTCEEEEETCSSHHHHHHHHHHTTSSCEE
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHCCCEE
Confidence 36789999999999999999999999999854
No 123
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=42.12 E-value=14 Score=34.99 Aligned_cols=32 Identities=31% Similarity=0.515 Sum_probs=29.1
Q ss_pred CCCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 224 VETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 224 i~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
.++.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 28 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V 59 (276)
T 3r1i_A 28 FDLSGKRALITGASTGIGKKVALAYAEAGAQV 59 (276)
T ss_dssp GCCTTCEEEEESTTSHHHHHHHHHHHHTTCEE
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEE
Confidence 36899999999999999999999999999854
No 124
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=42.03 E-value=12 Score=36.31 Aligned_cols=31 Identities=32% Similarity=0.438 Sum_probs=28.9
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
.|+||.++|+|.|.=+|+-.|..|+.+|+.|
T Consensus 26 rL~gKvalVTGas~GIG~aiA~~la~~Ga~V 56 (273)
T 4fgs_A 26 RLNAKIAVITGATSGIGLAAAKRFVAEGARV 56 (273)
T ss_dssp TTTTCEEEEESCSSHHHHHHHHHHHHTTCEE
T ss_pred hhCCCEEEEeCcCCHHHHHHHHHHHHCCCEE
Confidence 4899999999999999999999999999965
No 125
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=41.89 E-value=14 Score=34.73 Aligned_cols=32 Identities=31% Similarity=0.394 Sum_probs=29.0
Q ss_pred CCCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 224 VETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 224 i~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
-.+.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 7 ~~l~~k~~lVTGas~gIG~aia~~la~~G~~V 38 (286)
T 3uve_A 7 GRVEGKVAFVTGAARGQGRSHAVRLAQEGADI 38 (286)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEE
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCeE
Confidence 35789999999999999999999999999854
No 126
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=41.82 E-value=13 Score=34.85 Aligned_cols=33 Identities=36% Similarity=0.502 Sum_probs=29.9
Q ss_pred CCCCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 223 KVETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 223 gi~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
..++.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 24 ~m~l~~k~vlITGas~gIG~~la~~l~~~G~~V 56 (271)
T 4iin_A 24 AMQFTGKNVLITGASKGIGAEIAKTLASMGLKV 56 (271)
T ss_dssp CCCCSCCEEEETTCSSHHHHHHHHHHHHTTCEE
T ss_pred hcccCCCEEEEECCCcHHHHHHHHHHHHCCCEE
Confidence 457899999999999999999999999999854
No 127
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=41.67 E-value=15 Score=34.63 Aligned_cols=32 Identities=28% Similarity=0.415 Sum_probs=29.0
Q ss_pred CCCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 224 VETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 224 i~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
.++.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V 38 (271)
T 3tzq_B 7 AELENKVAIITGACGGIGLETSRVLARAGARV 38 (271)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEE
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEE
Confidence 36789999999999999999999999999854
No 128
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=41.66 E-value=12 Score=35.04 Aligned_cols=31 Identities=35% Similarity=0.573 Sum_probs=28.6
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
++.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 7 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V 37 (262)
T 3pk0_A 7 DLQGRSVVVTGGTKGIGRGIATVFARAGANV 37 (262)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEE
Confidence 5789999999999999999999999999854
No 129
>4f2g_A Otcase 1, ornithine carbamoyltransferase 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=41.58 E-value=2.1e+02 Score=28.38 Aligned_cols=128 Identities=12% Similarity=0.024 Sum_probs=78.3
Q ss_pred EEEEEEeCCChhhHHHHHHHHHHHHHcCCeeeeeEEecCCcccHH------hhhccccCCCCCCccEEEEcCCCCCCCcH
Q psy4615 103 TLTAILVGNDSASSTYVNNKMKSAAKVGEVNALGVLYHLTLFGRS------KLINPMSIPISTGVSSHISQLPLPEHMVE 176 (477)
Q Consensus 103 ~LaiI~vGdd~aS~~Yv~~k~k~a~~vGI~~~~~~~lp~~~~t~e------~~I~~L~~N~D~~V~GILVqlPLP~~ld~ 176 (477)
.++.|..- |+.+ ---+=..++.++|.++. .+. +.++ +.. +.++-| +.= +|+|++-.| .|-..
T Consensus 47 ~la~lF~e--~STR-TR~SFE~A~~~LGg~~i-~l~-~~~s-s~~kgEsl~DTarvl--s~~--~D~iviR~~--~~~~~ 114 (309)
T 4f2g_A 47 TLAMIFEK--SSTR-TRLSFEAGIFQLGGHAV-FMS-TRDT-QLGRGEPVEDSAQVI--SRM--VDIIMIRTF--EQDII 114 (309)
T ss_dssp EEEEEESS--CCHH-HHHHHHHHHHHTTCEEE-EEC-CSSC-EETBEECHHHHHHHH--HHH--CSEEEEECS--CHHHH
T ss_pred eEEEEecC--CChh-hHhhHHHHHHHcCCeEE-EcC-cccc-cCCCCCCHHHHHHHH--HHh--CCEEEEecC--CHHHH
Confidence 45555543 2222 22344788999999877 544 3222 111 444433 222 789998755 23222
Q ss_pred HHHHhhcCCCCCCCCCCccchHHhhcCCCCcccCCHHH-HHHHHHHhCCCCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 177 RAVCNAVAPHKDVDGFNIVNVGRFCLDLKTLIPCTPLG-VQELIRRYKVETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 177 ~~l~~aI~p~KDVDGl~p~nlg~l~~g~~~f~PcTa~A-v~~Lle~~gi~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
+.+.+.. +.+-+|.| .....||=+.+ ++.+.|+.| +++|++++++|-.+.|..-+...+..-|+++
T Consensus 115 ~~lA~~~-------~vPVINag-----~~~~HPtQaLaDl~Ti~e~~g-~l~glkva~vGD~~~va~Sl~~~~~~~G~~v 181 (309)
T 4f2g_A 115 QRFAENS-------RVPVINGL-----TNEYHPCQVLADIFTYYEHRG-PIRGKTVAWVGDANNMLYTWIQAARILDFKL 181 (309)
T ss_dssp HHHHHTC-------SSCEEEEE-----CSSCCHHHHHHHHHHHHHHHS-CCTTCEEEEESCCCHHHHHHHHHHHHHTCEE
T ss_pred HHHHHhC-------CCCEEECC-----CCccCcHHHHHHHHHHHHHhC-CCCCCEEEEECCCcchHHHHHHHHHHcCCEE
Confidence 3332221 35566643 35788998887 678888888 7999999999987767777777776666643
No 130
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=41.54 E-value=15 Score=34.13 Aligned_cols=31 Identities=32% Similarity=0.445 Sum_probs=28.1
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
++.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V 33 (256)
T 2d1y_A 3 LFAGKGVLVTGGARGIGRAIAQAFAREGALV 33 (256)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEE
Confidence 3689999999999999999999999999854
No 131
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=41.52 E-value=15 Score=34.61 Aligned_cols=31 Identities=29% Similarity=0.459 Sum_probs=28.8
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
+++||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 12 ~l~gk~~lVTGas~gIG~a~a~~la~~G~~V 42 (280)
T 3pgx_A 12 SLQGRVAFITGAARGQGRSHAVRLAAEGADI 42 (280)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEE
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEE
Confidence 5899999999999999999999999999854
No 132
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=41.50 E-value=15 Score=33.96 Aligned_cols=31 Identities=29% Similarity=0.422 Sum_probs=28.3
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
++.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V 34 (249)
T 2ew8_A 4 RLKDKLAVITGGANGIGRAIAERFAVEGADI 34 (249)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEE
Confidence 4789999999999999999999999999854
No 133
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=41.49 E-value=13 Score=33.95 Aligned_cols=31 Identities=29% Similarity=0.395 Sum_probs=28.4
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
.++||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 11 ~l~~k~vlITGas~gIG~~ia~~l~~~G~~V 41 (247)
T 3i1j_A 11 LLKGRVILVTGAARGIGAAAARAYAAHGASV 41 (247)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEE
T ss_pred cCCCCEEEEeCCCChHHHHHHHHHHHCCCEE
Confidence 4789999999999999999999999999854
No 134
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=41.39 E-value=15 Score=34.24 Aligned_cols=31 Identities=29% Similarity=0.535 Sum_probs=28.4
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
++.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V 34 (262)
T 1zem_A 4 KFNGKVCLVTGAGGNIGLATALRLAEEGTAI 34 (262)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEE
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEE
Confidence 5789999999999999999999999999854
No 135
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=41.33 E-value=15 Score=34.62 Aligned_cols=32 Identities=28% Similarity=0.350 Sum_probs=28.8
Q ss_pred CCCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 224 VETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 224 i~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
.++.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V 38 (281)
T 3svt_A 7 LSFQDRTYLVTGGGSGIGKGVAAGLVAAGASV 38 (281)
T ss_dssp -CCTTCEEEEETTTSHHHHHHHHHHHHTTCEE
T ss_pred cCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEE
Confidence 46889999999999999999999999999854
No 136
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=41.31 E-value=15 Score=33.69 Aligned_cols=31 Identities=26% Similarity=0.394 Sum_probs=28.2
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
++.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 4 ~~~~k~vlITGasggiG~~la~~l~~~G~~V 34 (264)
T 2pd6_A 4 RLRSALALVTGAGSGIGRAVSVRLAGEGATV 34 (264)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEE
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCEE
Confidence 4789999999999999999999999998854
No 137
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=41.17 E-value=15 Score=34.30 Aligned_cols=31 Identities=32% Similarity=0.454 Sum_probs=28.3
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
++.||.++|+|.+.-+|+-++..|+.+|+.|
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V 34 (260)
T 1nff_A 4 RLTGKVALVSGGARGMGASHVRAMVAEGAKV 34 (260)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEE
Confidence 4789999999999999999999999999854
No 138
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=41.05 E-value=15 Score=33.67 Aligned_cols=31 Identities=29% Similarity=0.397 Sum_probs=28.4
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
++.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 9 ~~~~k~vlVTGasggiG~~~a~~l~~~G~~V 39 (265)
T 2o23_A 9 SVKGLVAVITGGASGLGLATAERLVGQGASA 39 (265)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEE
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEE
Confidence 5789999999999999999999999998854
No 139
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=41.03 E-value=14 Score=35.46 Aligned_cols=29 Identities=10% Similarity=0.117 Sum_probs=26.4
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCC
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGA 253 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a 253 (477)
++.|++++|+|.+..+|+.++..|+.++.
T Consensus 17 ~~~~~~vlVTGasG~iG~~l~~~L~~~g~ 45 (330)
T 2pzm_A 17 RGSHMRILITGGAGCLGSNLIEHWLPQGH 45 (330)
T ss_dssp TTTCCEEEEETTTSHHHHHHHHHHGGGTC
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCC
Confidence 67899999999999999999999988776
No 140
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=41.00 E-value=16 Score=33.85 Aligned_cols=31 Identities=39% Similarity=0.510 Sum_probs=28.2
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
++.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V 34 (247)
T 2jah_A 4 ALQGKVALITGASSGIGEATARALAAEGAAV 34 (247)
T ss_dssp TTTTCEEEEESCSSHHHHHHHHHHHHTTCEE
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCEE
Confidence 4689999999999999999999999999854
No 141
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=40.96 E-value=13 Score=34.38 Aligned_cols=31 Identities=35% Similarity=0.426 Sum_probs=28.5
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
++.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 11 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V 41 (260)
T 2zat_A 11 PLENKVALVTASTDGIGLAIARRLAQDGAHV 41 (260)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTCEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEE
Confidence 5789999999999999999999999999854
No 142
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=40.92 E-value=16 Score=33.53 Aligned_cols=31 Identities=29% Similarity=0.433 Sum_probs=28.3
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
++.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 10 ~l~~k~vlItGasggiG~~la~~l~~~G~~V 40 (260)
T 3awd_A 10 RLDNRVAIVTGGAQNIGLACVTALAEAGARV 40 (260)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEE
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEE
Confidence 5789999999999999999999999998854
No 143
>3hs3_A Ribose operon repressor; PSI-II, NYSGXRC, periplasmic binding protein, structural genomics, protein structure initiative; 1.60A {Lactobacillus acidophilus}
Probab=40.90 E-value=41 Score=30.94 Aligned_cols=65 Identities=11% Similarity=0.099 Sum_probs=43.9
Q ss_pred CCCCEEEEEEeC-CChhhHHHHHHHHHHHHHcCCe-eeeeEEecCCcccHH-hhhccccCCCCCCccEEEEcC
Q psy4615 99 HRVPTLTAILVG-NDSASSTYVNNKMKSAAKVGEV-NALGVLYHLTLFGRS-KLINPMSIPISTGVSSHISQL 168 (477)
Q Consensus 99 g~~P~LaiI~vG-dd~aS~~Yv~~k~k~a~~vGI~-~~~~~~lp~~~~t~e-~~I~~L~~N~D~~V~GILVql 168 (477)
++..++++|.-. +++--..+.+...+.|++.|.. .. ......+. ..+ +.++.+ . ...|+||++.-
T Consensus 8 ~~~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~-~~~~~~~~-~~~~~~~~~l--~-~~~vdgiIi~~ 75 (277)
T 3hs3_A 8 KKSKMIGIIIPDLNNRFYAQIIDGIQEVIQKEGYTALI-SFSTNSDV-KKYQNAIINF--E-NNNVDGIITSA 75 (277)
T ss_dssp CCCCEEEEEESCTTSHHHHHHHHHHHHHHHHTTCEEEE-EECSSCCH-HHHHHHHHHH--H-HTTCSEEEEEC
T ss_pred CCCCEEEEEeCCCCChhHHHHHHHHHHHHHHCCCCEEE-EEeCCCCh-HHHHHHHHHH--H-hCCCCEEEEcc
Confidence 356678887754 3555566788899999999999 77 55544444 222 566665 2 34799999964
No 144
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=40.87 E-value=15 Score=34.47 Aligned_cols=33 Identities=33% Similarity=0.455 Sum_probs=29.3
Q ss_pred CCCCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 223 KVETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 223 gi~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
..++.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 16 ~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V 48 (267)
T 1vl8_A 16 VFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSV 48 (267)
T ss_dssp -CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEE
T ss_pred CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEE
Confidence 356889999999999999999999999999854
No 145
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=40.77 E-value=11 Score=35.48 Aligned_cols=31 Identities=29% Similarity=0.517 Sum_probs=28.2
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
++.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V 33 (280)
T 1xkq_A 3 RFSNKTVIITGSSNGIGRTTAILFAQEGANV 33 (280)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTCEE
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEE
Confidence 3689999999999999999999999999854
No 146
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=40.60 E-value=15 Score=34.17 Aligned_cols=31 Identities=26% Similarity=0.320 Sum_probs=27.9
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
++.||.++|+|.+.-+|+-++..|+.+|+.|
T Consensus 4 ~~~~k~vlVTGas~GIG~aia~~l~~~G~~V 34 (252)
T 3h7a_A 4 TPRNATVAVIGAGDYIGAEIAKKFAAEGFTV 34 (252)
T ss_dssp -CCSCEEEEECCSSHHHHHHHHHHHHTTCEE
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEE
Confidence 5789999999999999999999999999854
No 147
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=40.60 E-value=18 Score=33.76 Aligned_cols=31 Identities=23% Similarity=0.263 Sum_probs=28.5
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
.+.||.++|+|-+.-+|+-++..|+.+++.|
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V 38 (264)
T 3ucx_A 8 LLTDKVVVISGVGPALGTTLARRCAEQGADL 38 (264)
T ss_dssp TTTTCEEEEESCCTTHHHHHHHHHHHTTCEE
T ss_pred CcCCcEEEEECCCcHHHHHHHHHHHHCcCEE
Confidence 4789999999999999999999999999854
No 148
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=40.55 E-value=16 Score=33.75 Aligned_cols=32 Identities=28% Similarity=0.361 Sum_probs=29.0
Q ss_pred CCCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 224 VETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 224 i~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
.++.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 5 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V 36 (261)
T 3n74_A 5 MSLEGKVALITGAGSGFGEGMAKRFAKGGAKV 36 (261)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEE
T ss_pred ccCCCCEEEEECCCchHHHHHHHHHHHCCCEE
Confidence 46789999999999999999999999999854
No 149
>3bbl_A Regulatory protein of LACI family; protein structure initiative II, PSI-II, NYSGXRC, transcript regulator, periplasmic binding protein; 2.35A {Chloroflexus aggregans}
Probab=40.54 E-value=37 Score=31.40 Aligned_cols=66 Identities=6% Similarity=-0.060 Sum_probs=42.6
Q ss_pred CCCEEEEEEeC-----CChhhHHHHHHHHHHHHHcCCeeeeeEEecCCcccHHhhhccccCCCCCCccEEEEcCC
Q psy4615 100 RVPTLTAILVG-----NDSASSTYVNNKMKSAAKVGEVNALGVLYHLTLFGRSKLINPMSIPISTGVSSHISQLP 169 (477)
Q Consensus 100 ~~P~LaiI~vG-----dd~aS~~Yv~~k~k~a~~vGI~~~~~~~lp~~~~t~e~~I~~L~~N~D~~V~GILVqlP 169 (477)
+..++++|.-. +++--...++...+.|++.|.+.. ......+.+.+.+.++.+ . ...|+|||+.-+
T Consensus 3 ~s~~Ig~i~~~~~~~~~~~~~~~~~~gi~~~a~~~g~~~~-~~~~~~~~~~~~~~~~~l--~-~~~vdgiIi~~~ 73 (287)
T 3bbl_A 3 LSFMIGYSWTQTEPGQVNHILDQFLSSMVREAGAVNYFVL-PFPFSEDRSQIDIYRDLI--R-SGNVDGFVLSSI 73 (287)
T ss_dssp CCCEEEECCCCCCTTCSCCTHHHHHHHHHHHHHHTTCEEE-ECCCCSSTTCCHHHHHHH--H-TTCCSEEEECSC
T ss_pred ceeEEEEEecccccccCChhHHHHHHHHHHHHHHcCCEEE-EEeCCCchHHHHHHHHHH--H-cCCCCEEEEeec
Confidence 34567777654 455556778888999999998877 543333321122666666 3 346999999643
No 150
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=40.52 E-value=13 Score=34.97 Aligned_cols=31 Identities=39% Similarity=0.561 Sum_probs=28.7
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
++.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 24 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V 54 (266)
T 3grp_A 24 KLTGRKALVTGATGGIGEAIARCFHAQGAIV 54 (266)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEE
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEE
Confidence 6899999999999999999999999999854
No 151
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=40.39 E-value=16 Score=33.81 Aligned_cols=31 Identities=29% Similarity=0.343 Sum_probs=28.3
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
++.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 13 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V 43 (278)
T 2bgk_A 13 RLQDKVAIITGGAGGIGETTAKLFVRYGAKV 43 (278)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEE
T ss_pred cccCCEEEEECCCCHHHHHHHHHHHHCCCEE
Confidence 5789999999999999999999999998854
No 152
>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}
Probab=40.37 E-value=13 Score=35.05 Aligned_cols=31 Identities=35% Similarity=0.433 Sum_probs=27.7
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
++.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 25 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V 55 (266)
T 3uxy_A 25 GFEGKVALVTGAAGGIGGAVVTALRAAGARV 55 (266)
T ss_dssp -CTTCEEEESSTTSHHHHHHHHHHHHTTCEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEE
Confidence 5789999999999999999999999999843
No 153
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=40.34 E-value=15 Score=34.56 Aligned_cols=31 Identities=29% Similarity=0.383 Sum_probs=28.1
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
++.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V 35 (264)
T 2dtx_A 5 DLRDKVVIVTGASMGIGRAIAERFVDEGSKV 35 (264)
T ss_dssp GGTTCEEEEESCSSHHHHHHHHHHHHTTCEE
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEE
Confidence 4689999999999999999999999999844
No 154
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=40.28 E-value=14 Score=35.40 Aligned_cols=31 Identities=35% Similarity=0.443 Sum_probs=28.5
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
++.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 31 ~l~~k~vlVTGas~gIG~aia~~L~~~G~~V 61 (291)
T 3cxt_A 31 SLKGKIALVTGASYGIGFAIASAYAKAGATI 61 (291)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTCEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEE
Confidence 5789999999999999999999999999854
No 155
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=40.17 E-value=16 Score=34.31 Aligned_cols=31 Identities=26% Similarity=0.442 Sum_probs=28.7
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
++.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 8 ~l~~k~~lVTGas~GIG~a~a~~la~~G~~V 38 (277)
T 3tsc_A 8 KLEGRVAFITGAARGQGRAHAVRMAAEGADI 38 (277)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEE
T ss_pred ccCCCEEEEECCccHHHHHHHHHHHHcCCEE
Confidence 5789999999999999999999999999854
No 156
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=40.16 E-value=14 Score=34.02 Aligned_cols=31 Identities=23% Similarity=0.383 Sum_probs=28.1
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
++.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V 33 (246)
T 2ag5_A 3 RLDGKVIILTAAAQGIGQAAALAFAREGAKV 33 (246)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEE
Confidence 4689999999999999999999999998854
No 157
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=40.03 E-value=16 Score=33.87 Aligned_cols=31 Identities=35% Similarity=0.423 Sum_probs=28.4
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
++.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V 34 (260)
T 2z1n_A 4 GIQGKLAVVTAGSSGLGFASALELARNGARL 34 (260)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEE
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEE
Confidence 5789999999999999999999999999854
No 158
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=40.00 E-value=13 Score=35.16 Aligned_cols=32 Identities=31% Similarity=0.465 Sum_probs=29.1
Q ss_pred CCCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 224 VETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 224 i~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
.++.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 22 ~~l~gk~~lVTGas~gIG~aia~~la~~G~~V 53 (271)
T 4ibo_A 22 FDLGGRTALVTGSSRGLGRAMAEGLAVAGARI 53 (271)
T ss_dssp GCCTTCEEEETTCSSHHHHHHHHHHHHTTCEE
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEE
Confidence 36899999999999999999999999999854
No 159
>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}
Probab=39.95 E-value=18 Score=33.44 Aligned_cols=29 Identities=21% Similarity=0.181 Sum_probs=26.1
Q ss_pred CCCCCCeEEEECCCCCcchHHHHHhhhCC
Q psy4615 224 VETFGKNAVVCGRSKNVGMPIAMLLHADG 252 (477)
Q Consensus 224 i~l~Gk~vvViGrS~~VGkPLA~lL~~~~ 252 (477)
..+.+++++|+|.+..+|+.++..|..++
T Consensus 2 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g 30 (319)
T 4b8w_A 2 LYFQSMRILVTGGSGLVGKAIQKVVADGA 30 (319)
T ss_dssp CCCCCCEEEEETCSSHHHHHHHHHHHTTT
T ss_pred ccccCCeEEEECCCcHHHHHHHHHHHhcC
Confidence 45789999999999999999999998876
No 160
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=39.94 E-value=77 Score=31.60 Aligned_cols=139 Identities=17% Similarity=0.148 Sum_probs=86.4
Q ss_pred EEEEEEeCCChhhHHHHHHHHHHHHHcCCeeeeeEEecCCcc-----cHHhhhccccCCCCCCccEEEEcCCCCCCCcHH
Q psy4615 103 TLTAILVGNDSASSTYVNNKMKSAAKVGEVNALGVLYHLTLF-----GRSKLINPMSIPISTGVSSHISQLPLPEHMVER 177 (477)
Q Consensus 103 ~LaiI~vGdd~aS~~Yv~~k~k~a~~vGI~~~~~~~lp~~~~-----t~e~~I~~L~~N~D~~V~GILVqlPLP~~ld~~ 177 (477)
.++.|..- |+.+ ---+=..++.++|.++. .+.- .++. +-++.++-| +.= +|+|++-.| .|-..+
T Consensus 48 ~la~lF~e--~STR-TR~SFe~A~~~LGg~~i-~l~~-~~ss~~kgEsl~DTarvl--s~~--~D~iviR~~--~~~~~~ 116 (315)
T 1pvv_A 48 TLAMIFQK--PSTR-TRVSFEVAMAHLGGHAL-YLNA-QDLQLRRGETIADTARVL--SRY--VDAIMARVY--DHKDVE 116 (315)
T ss_dssp EEEEEESS--CCSH-HHHHHHHHHHHTTSEEE-EEEG-GGSTTTTTCCHHHHHHHH--TTT--CSEEEEECS--SHHHHH
T ss_pred EEEEEecC--CCcc-hHHHHHHHHHHcCCeEE-EECC-ccccCCCCcCHHHHHHHH--HHh--CcEEEEecC--chHHHH
Confidence 35555543 2222 22344788999999888 6652 2220 111555555 333 689999755 333333
Q ss_pred HHHhhcCCCCCCCCCCccchHHhhcCCCCcccCCHHH-HHHHHHHhCCCCCCCeEEEECCCCCcchHHHHHhhhCCCCcc
Q psy4615 178 AVCNAVAPHKDVDGFNIVNVGRFCLDLKTLIPCTPLG-VQELIRRYKVETFGKNAVVCGRSKNVGMPIAMLLHADGAGVS 256 (477)
Q Consensus 178 ~l~~aI~p~KDVDGl~p~nlg~l~~g~~~f~PcTa~A-v~~Lle~~gi~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v~ 256 (477)
.+.+.. +.+-+|. |.....||-+.| ++.+.|+.| +++|.+++++|-.+-|..-+...+..-|+++
T Consensus 117 ~lA~~~-------~vPVINa-----~~~~~HPtQaLaDl~Ti~e~~g-~l~gl~va~vGD~~rva~Sl~~~~~~~g~~v- 182 (315)
T 1pvv_A 117 DLAKYA-------TVPVING-----LSDFSHPCQALADYMTIWEKKG-TIKGVKVVYVGDGNNVAHSLMIAGTKLGADV- 182 (315)
T ss_dssp HHHHHC-------SSCEEEE-----ECSSCCHHHHHHHHHHHHHHHS-CCTTCEEEEESCCCHHHHHHHHHHHHTTCEE-
T ss_pred HHHHhC-------CCCEEcC-----CCCCCCcHHHHHHHHHHHHHhC-CcCCcEEEEECCCcchHHHHHHHHHHCCCEE-
Confidence 443332 2555663 345789998886 677778777 7999999999986777777888887777754
Q ss_pred ccceEEccCCCCCCh
Q psy4615 257 EVAGYITPVPGGVGP 271 (477)
Q Consensus 257 ~~a~~iTPVpGGVGp 271 (477)
...+| -|-.|
T Consensus 183 ---~~~~P--~~~~~ 192 (315)
T 1pvv_A 183 ---VVATP--EGYEP 192 (315)
T ss_dssp ---EEECC--TTCCC
T ss_pred ---EEECC--ccccC
Confidence 24455 44544
No 161
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=39.91 E-value=48 Score=30.91 Aligned_cols=66 Identities=11% Similarity=-0.096 Sum_probs=44.9
Q ss_pred CEEEEEEeC-CChhhHHHHHHHHHHHHHcCCeeeeeEEecCCcccHH-hhhccccCCCCCCccEEEEcCCCCC
Q psy4615 102 PTLTAILVG-NDSASSTYVNNKMKSAAKVGEVNALGVLYHLTLFGRS-KLINPMSIPISTGVSSHISQLPLPE 172 (477)
Q Consensus 102 P~LaiI~vG-dd~aS~~Yv~~k~k~a~~vGI~~~~~~~lp~~~~t~e-~~I~~L~~N~D~~V~GILVqlPLP~ 172 (477)
.++++|.-. +++--...++...+.|++.|.++. ......+. .++ +.++.+ . ...++||++.-.-+.
T Consensus 3 ~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~-~~~~~~~~-~~~~~~i~~l--~-~~~vdgiIi~~~~~~ 70 (313)
T 3m9w_A 3 VKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVF-VQSANGNE-ETQMSQIENM--I-NRGVDVLVIIPYNGQ 70 (313)
T ss_dssp CEEEEEESCCSSSTTHHHHHHHHHHHHHTSCEEE-EEECTTCH-HHHHHHHHHH--H-HTTCSEEEEECSSTT
T ss_pred cEEEEEeCCCCChHHHHHHHHHHHHHHHcCCEEE-EECCCCCH-HHHHHHHHHH--H-HcCCCEEEEeCCChh
Confidence 457777654 356667788899999999999988 66554443 222 666666 3 236999999754443
No 162
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=39.87 E-value=13 Score=35.04 Aligned_cols=32 Identities=38% Similarity=0.496 Sum_probs=29.4
Q ss_pred CCCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 224 VETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 224 i~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
.++.||.++|+|.+.-+|+-++..|+.+|+.|
T Consensus 24 ~~l~~k~vlVTGas~gIG~aia~~la~~G~~V 55 (269)
T 4dmm_A 24 LPLTDRIALVTGASRGIGRAIALELAAAGAKV 55 (269)
T ss_dssp CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEE
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEE
Confidence 56899999999999999999999999999854
No 163
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=39.87 E-value=14 Score=33.73 Aligned_cols=31 Identities=35% Similarity=0.477 Sum_probs=28.2
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
++.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 2 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v 32 (247)
T 3lyl_A 2 SLNEKVALVTGASRGIGFEVAHALASKGATV 32 (247)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTCEE
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEE
Confidence 4689999999999999999999999999854
No 164
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=39.87 E-value=13 Score=34.40 Aligned_cols=31 Identities=39% Similarity=0.572 Sum_probs=28.3
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
++.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V 33 (253)
T 1hxh_A 3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKV 33 (253)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEE
Confidence 4789999999999999999999999998854
No 165
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=39.83 E-value=15 Score=35.00 Aligned_cols=31 Identities=32% Similarity=0.545 Sum_probs=28.1
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
+++||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 26 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V 56 (277)
T 3gvc_A 26 DLAGKVAIVTGAGAGIGLAVARRLADEGCHV 56 (277)
T ss_dssp -CTTCEEEETTTTSTHHHHHHHHHHHTTCEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEE
Confidence 5799999999999999999999999999854
No 166
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=39.82 E-value=14 Score=34.67 Aligned_cols=31 Identities=35% Similarity=0.463 Sum_probs=28.7
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
++.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 15 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V 45 (270)
T 3is3_A 15 RLDGKVALVTGSGRGIGAAVAVHLGRLGAKV 45 (270)
T ss_dssp CCTTCEEEESCTTSHHHHHHHHHHHHTTCEE
T ss_pred CcCCCEEEEECCCchHHHHHHHHHHHCCCEE
Confidence 5789999999999999999999999999854
No 167
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=39.79 E-value=16 Score=34.63 Aligned_cols=31 Identities=32% Similarity=0.558 Sum_probs=28.6
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
++.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 22 ~l~~k~~lVTGas~GIG~~ia~~la~~G~~V 52 (281)
T 3v2h_A 22 SMMTKTAVITGSTSGIGLAIARTLAKAGANI 52 (281)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTCEE
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEE
Confidence 6789999999999999999999999999854
No 168
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=39.66 E-value=99 Score=27.76 Aligned_cols=63 Identities=13% Similarity=-0.019 Sum_probs=42.2
Q ss_pred EEEEEEeC-CChhhHHHHHHHHHHHHHcCCeeeeeEEecCCcccHH-hhhccccCCCCCCccEEEEcCCC
Q psy4615 103 TLTAILVG-NDSASSTYVNNKMKSAAKVGEVNALGVLYHLTLFGRS-KLINPMSIPISTGVSSHISQLPL 170 (477)
Q Consensus 103 ~LaiI~vG-dd~aS~~Yv~~k~k~a~~vGI~~~~~~~lp~~~~t~e-~~I~~L~~N~D~~V~GILVqlPL 170 (477)
++++|.-. +++--...++...+.|++.|.++. .+....+. ..+ +.++.+ . ..+++||++.-..
T Consensus 4 ~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~-~~~~~~~~-~~~~~~~~~l--~-~~~vdgiIi~~~~ 68 (272)
T 3o74_A 4 TLGFILPDLENPSYARIAKQLEQGARARGYQLL-IASSDDQP-DSERQLQQLF--R-ARRCDALFVASCL 68 (272)
T ss_dssp EEEEEESCTTCHHHHHHHHHHHHHHHHTTCEEE-EEECTTCH-HHHHHHHHHH--H-HTTCSEEEECCCC
T ss_pred EEEEEeCCCcChhHHHHHHHHHHHHHHCCCEEE-EEeCCCCH-HHHHHHHHHH--H-HcCCCEEEEecCc
Confidence 56666554 344556667888999999999998 77655544 222 666665 2 3479999996443
No 169
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=39.65 E-value=13 Score=34.99 Aligned_cols=31 Identities=39% Similarity=0.565 Sum_probs=28.5
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
++.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 27 ~l~~k~vlVTGas~GIG~aia~~l~~~G~~V 57 (281)
T 3ppi_A 27 QFEGASAIVSGGAGGLGEATVRRLHADGLGV 57 (281)
T ss_dssp GGTTEEEEEETTTSHHHHHHHHHHHHTTCEE
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCEE
Confidence 5789999999999999999999999999854
No 170
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=39.59 E-value=17 Score=34.04 Aligned_cols=32 Identities=34% Similarity=0.419 Sum_probs=29.2
Q ss_pred CCCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 224 VETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 224 i~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
.++.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 4 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V 35 (265)
T 3lf2_A 4 YDLSEAVAVVTGGSSGIGLATVELLLEAGAAV 35 (265)
T ss_dssp CCCTTCEEEEETCSSHHHHHHHHHHHHTTCEE
T ss_pred cCcCCCEEEEeCCCChHHHHHHHHHHHCCCEE
Confidence 46889999999999999999999999999854
No 171
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=39.59 E-value=17 Score=33.74 Aligned_cols=31 Identities=29% Similarity=0.271 Sum_probs=28.5
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
.+.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 9 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V 39 (252)
T 3f1l_A 9 LLNDRIILVTGASDGIGREAAMTYARYGATV 39 (252)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEE
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHCCCEE
Confidence 4789999999999999999999999999854
No 172
>3gyb_A Transcriptional regulators (LACI-family transcriptional regulatory protein); protein structure initiative II(PSI II), nysgxrc; 1.60A {Corynebacterium glutamicum}
Probab=39.58 E-value=59 Score=29.60 Aligned_cols=61 Identities=10% Similarity=-0.025 Sum_probs=42.1
Q ss_pred CCCEEEEEEeC-CChhhHHHHHHHHHHHHHcCCeeeeeEEecCCcccHHhhhccccCCCCCCccEEE
Q psy4615 100 RVPTLTAILVG-NDSASSTYVNNKMKSAAKVGEVNALGVLYHLTLFGRSKLINPMSIPISTGVSSHI 165 (477)
Q Consensus 100 ~~P~LaiI~vG-dd~aS~~Yv~~k~k~a~~vGI~~~~~~~lp~~~~t~e~~I~~L~~N~D~~V~GIL 165 (477)
+..++++|.-. +++--....+...+.|++.|.++. ..... +.+.+.+.++.+ . ...|+|||
T Consensus 4 ~~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~-~~~~~-~~~~~~~~~~~l--~-~~~vdgiI 65 (280)
T 3gyb_A 4 RTQLIAVLIDDYSNPWFIDLIQSLSDVLTPKGYRLS-VIDSL-TSQAGTDPITSA--L-SMRPDGII 65 (280)
T ss_dssp CCCEEEEEESCTTSGGGHHHHHHHHHHHGGGTCEEE-EECSS-SSCSSSCHHHHH--H-TTCCSEEE
T ss_pred ccCEEEEEeCCCCChHHHHHHHHHHHHHHHCCCEEE-EEeCC-CchHHHHHHHHH--H-hCCCCEEE
Confidence 45567777644 355567778888999999999998 66655 441222666666 3 34799999
No 173
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=39.55 E-value=16 Score=34.60 Aligned_cols=32 Identities=25% Similarity=0.375 Sum_probs=29.1
Q ss_pred CCCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 224 VETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 224 i~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
.++.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 23 ~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V 54 (277)
T 4dqx_A 23 MDLNQRVCIVTGGGSGIGRATAELFAKNGAYV 54 (277)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEE
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEE
Confidence 46789999999999999999999999999854
No 174
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=39.44 E-value=14 Score=33.91 Aligned_cols=32 Identities=38% Similarity=0.622 Sum_probs=29.2
Q ss_pred CCCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 224 VETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 224 i~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
.++.||+++|+|.+.-+|+-++..|+.+|+.|
T Consensus 10 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V 41 (249)
T 3f9i_A 10 IDLTGKTSLITGASSGIGSAIARLLHKLGSKV 41 (249)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEE
T ss_pred ccCCCCEEEEECCCChHHHHHHHHHHHCCCEE
Confidence 46799999999999999999999999999854
No 175
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=39.42 E-value=17 Score=33.40 Aligned_cols=32 Identities=22% Similarity=0.232 Sum_probs=28.6
Q ss_pred CCCCCCeEEEECCC--CCcchHHHHHhhhCCCCc
Q psy4615 224 VETFGKNAVVCGRS--KNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 224 i~l~Gk~vvViGrS--~~VGkPLA~lL~~~~a~v 255 (477)
.++.+|+++|+|.+ .-+|+-++..|+.+++.|
T Consensus 10 ~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V 43 (271)
T 3ek2_A 10 GFLDGKRILLTGLLSNRSIAYGIAKACKREGAEL 43 (271)
T ss_dssp CTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEE
T ss_pred cccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCE
Confidence 46789999999987 899999999999999854
No 176
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=39.41 E-value=12 Score=33.97 Aligned_cols=31 Identities=32% Similarity=0.557 Sum_probs=28.0
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
++.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 4 ~l~~k~vlVTGasggiG~~~a~~l~~~G~~V 34 (258)
T 3afn_B 4 DLKGKRVLITGSSQGIGLATARLFARAGAKV 34 (258)
T ss_dssp GGTTCEEEETTCSSHHHHHHHHHHHHTTCEE
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEE
Confidence 4689999999999999999999999998854
No 177
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=39.39 E-value=17 Score=34.10 Aligned_cols=32 Identities=13% Similarity=0.160 Sum_probs=28.9
Q ss_pred CCCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 224 VETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 224 i~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
.++.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 27 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V 58 (272)
T 1yb1_A 27 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKL 58 (272)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEE
T ss_pred cccCCCEEEEECCCchHHHHHHHHHHHCCCEE
Confidence 35789999999999999999999999998854
No 178
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=39.35 E-value=14 Score=33.73 Aligned_cols=32 Identities=31% Similarity=0.507 Sum_probs=28.8
Q ss_pred CCCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 224 VETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 224 i~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
.++.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 7 ~~~~~~~vlVtGasggiG~~la~~l~~~G~~V 38 (255)
T 1fmc_A 7 LRLDGKCAIITGAGAGIGKEIAITFATAGASV 38 (255)
T ss_dssp GCCTTCEEEETTTTSHHHHHHHHHHHTTTCEE
T ss_pred CCCCCCEEEEECCccHHHHHHHHHHHHCCCEE
Confidence 45789999999999999999999999998754
No 179
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=39.32 E-value=14 Score=35.13 Aligned_cols=31 Identities=39% Similarity=0.506 Sum_probs=28.7
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
+++||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 30 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V 60 (275)
T 4imr_A 30 GLRGRTALVTGSSRGIGAAIAEGLAGAGAHV 60 (275)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEE
Confidence 5799999999999999999999999999854
No 180
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=39.31 E-value=14 Score=34.04 Aligned_cols=30 Identities=43% Similarity=0.568 Sum_probs=27.6
Q ss_pred CCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 226 TFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 226 l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
+.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V 31 (246)
T 2uvd_A 2 LKGKVALVTGASRGIGRAIAIDLAKQGANV 31 (246)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEE
Confidence 679999999999999999999999998854
No 181
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=39.31 E-value=16 Score=34.43 Aligned_cols=32 Identities=25% Similarity=0.368 Sum_probs=27.1
Q ss_pred CCCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 224 VETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 224 i~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
.++.||.++|+|.+.-+|+-++..|+.+|+.|
T Consensus 12 ~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V 43 (266)
T 3p19_A 12 RGSMKKLVVITGASSGIGEAIARRFSEEGHPL 43 (266)
T ss_dssp ---CCCEEEEESTTSHHHHHHHHHHHHTTCCE
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEE
Confidence 45789999999999999999999999999854
No 182
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=39.20 E-value=17 Score=34.81 Aligned_cols=32 Identities=28% Similarity=0.414 Sum_probs=29.3
Q ss_pred CCCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 224 VETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 224 i~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
.+++||.++|+|.+.-+|+-++..|+.+|+.|
T Consensus 24 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V 55 (299)
T 3t7c_A 24 GKVEGKVAFITGAARGQGRSHAITLAREGADI 55 (299)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEE
T ss_pred cccCCCEEEEECCCCHHHHHHHHHHHHCCCEE
Confidence 36899999999999999999999999999854
No 183
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=39.16 E-value=1.7e+02 Score=29.26 Aligned_cols=130 Identities=12% Similarity=0.049 Sum_probs=78.2
Q ss_pred EEEEEEeCCChhhHHHHHHHHHHHHHcCCeeeeeEEecCCcccH------HhhhccccCCCCCCccEEEEcCCCCCCCcH
Q psy4615 103 TLTAILVGNDSASSTYVNNKMKSAAKVGEVNALGVLYHLTLFGR------SKLINPMSIPISTGVSSHISQLPLPEHMVE 176 (477)
Q Consensus 103 ~LaiI~vGdd~aS~~Yv~~k~k~a~~vGI~~~~~~~lp~~~~t~------e~~I~~L~~N~D~~V~GILVqlPLP~~ld~ 176 (477)
.++.|..- |+.+ ---+=..++.++|.++. ..+|..++ +. ++.++-| +.= +|+|++-.| .|-..
T Consensus 46 ~la~lF~e--~STR-TR~SFE~A~~~LGg~~i-~~~l~~~s-s~~kgEsl~DTarvl--s~~--~D~iviR~~--~~~~~ 114 (328)
T 3grf_A 46 TLLAFFAK--PSLR-TRVSLETAMTRLGGHAI-YYELGANS-NVGGKETVQDTAEVF--SRM--VDICTARLA--TKEMM 114 (328)
T ss_dssp EEEEEESS--CCHH-HHHHHHHHHHHHTCEEE-EEEC-----------CHHHHHHHH--TTT--CSEEEEECS--SHHHH
T ss_pred EEEEEecC--CCch-HHHHHHHHHHHCCCeEE-ccccCccc-cCCCCCCHHHHHHHH--Hhh--CCEEEEecC--ChhHH
Confidence 45555442 2322 23344788999999988 64454322 11 1555555 333 789999755 33333
Q ss_pred HHHHhhcCCCCCCCCCCccchHHhhcCCCCcccCCHHH-HHHHHHHhCC------CCCCCeEEEECCC-CCcchHHHHHh
Q psy4615 177 RAVCNAVAPHKDVDGFNIVNVGRFCLDLKTLIPCTPLG-VQELIRRYKV------ETFGKNAVVCGRS-KNVGMPIAMLL 248 (477)
Q Consensus 177 ~~l~~aI~p~KDVDGl~p~nlg~l~~g~~~f~PcTa~A-v~~Lle~~gi------~l~Gk~vvViGrS-~~VGkPLA~lL 248 (477)
..+.+.. +++-+|. |.....||=+.| ++.+.|+.|- .++|++++++|-. +.|-.-+...+
T Consensus 115 ~~lA~~~-------~vPVINa-----g~~~~HPtQaLaDl~Ti~e~~g~~~~~~~~l~gl~va~vGD~~~~va~Sl~~~~ 182 (328)
T 3grf_A 115 REMAQHA-------SVPCINA-----LDDFGHPLQMVCDFMTIKEKFTAAGEFSNGFKGIKFAYCGDSMNNVTYDLMRGC 182 (328)
T ss_dssp HHHHHHC-------SSCEEES-----SCSSCCHHHHHHHHHHHHHHHHHTTCCTTTGGGCCEEEESCCSSHHHHHHHHHH
T ss_pred HHHHHhC-------CCCEEeC-----CCCCCCcHHHHHHHHHHHHHhCCccccccccCCcEEEEeCCCCcchHHHHHHHH
Confidence 3343332 2455664 344789998887 7788888872 6899999999975 55666666666
Q ss_pred hhCCCCc
Q psy4615 249 HADGAGV 255 (477)
Q Consensus 249 ~~~~a~v 255 (477)
..-|+++
T Consensus 183 ~~~G~~v 189 (328)
T 3grf_A 183 ALLGMEC 189 (328)
T ss_dssp HHHTCEE
T ss_pred HHcCCEE
Confidence 6666643
No 184
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=39.09 E-value=17 Score=33.86 Aligned_cols=31 Identities=23% Similarity=0.365 Sum_probs=28.4
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
++.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 10 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V 40 (267)
T 1iy8_A 10 RFTDRVVLITGGGSGLGRATAVRLAAEGAKL 40 (267)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEE
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCEE
Confidence 5789999999999999999999999999854
No 185
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=39.08 E-value=25 Score=33.03 Aligned_cols=48 Identities=15% Similarity=0.053 Sum_probs=32.9
Q ss_pred CCCCCeEEEEecCCCCCC-ccccc--ceeccCCCCccHhHHHHHHHHHHHHHHHHHH
Q psy4615 1 MVKPGACVIDVGITRIKC-VSEVA--GYITPVPGGVGPMTVAMLMKNTILAAKHAVI 54 (477)
Q Consensus 1 ~vk~gavVIDvGin~~~~-~~~~~--~~iTPVPGGVGp~T~a~L~~N~v~aa~~~~~ 54 (477)
++++|++|+|++.+..+. ..+.+ .-.++++| ..||+.+.+.+.+.|..
T Consensus 195 ~l~~g~~viD~~~~p~~t~l~~~a~~~g~~~v~g------~~mlv~q~~~a~~~w~g 245 (263)
T 2d5c_A 195 LFPEEGAAVDLVYRPLWTRFLREAKAKGLKVQTG------LPMLAWQGALAFRLWTG 245 (263)
T ss_dssp GSCSSSEEEESCCSSSSCHHHHHHHHTTCEEECS------HHHHHHHHHHHHHHHHS
T ss_pred HcCCCCEEEEeecCCcccHHHHHHHHCcCEEECc------HHHHHHHHHHHHHHHhC
Confidence 468999999999886432 11111 12366766 78999999988887744
No 186
>3d8u_A PURR transcriptional regulator; APC91343.1, vibrio parahaem RIMD 2210633, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.88A {Vibrio parahaemolyticus}
Probab=38.96 E-value=52 Score=29.80 Aligned_cols=63 Identities=10% Similarity=0.071 Sum_probs=41.6
Q ss_pred CCEEEEEEeC-CChhhHHHHHHHHHHHHHcCCeeeeeEEecCCcccHH-hhhccccCCCCCCccEEEEcC
Q psy4615 101 VPTLTAILVG-NDSASSTYVNNKMKSAAKVGEVNALGVLYHLTLFGRS-KLINPMSIPISTGVSSHISQL 168 (477)
Q Consensus 101 ~P~LaiI~vG-dd~aS~~Yv~~k~k~a~~vGI~~~~~~~lp~~~~t~e-~~I~~L~~N~D~~V~GILVql 168 (477)
..++++|.-. .++--..+++...+.|++.|.++. ......+. ..+ +.++.+ . ..+|+||++.-
T Consensus 3 s~~Ig~i~~~~~~~~~~~~~~gi~~~~~~~g~~~~-~~~~~~~~-~~~~~~~~~l--~-~~~vdgii~~~ 67 (275)
T 3d8u_A 3 AYSIALIIPSLFEKACAHFLPSFQQALNKAGYQLL-LGYSDYSI-EQEEKLLSTF--L-ESRPAGVVLFG 67 (275)
T ss_dssp -CEEEEEESCSSCHHHHHHHHHHHHHHHHTSCEEC-CEECTTCH-HHHHHHHHHH--H-TSCCCCEEEES
T ss_pred ceEEEEEeCCCccccHHHHHHHHHHHHHHCCCEEE-EEcCCCCH-HHHHHHHHHH--H-hcCCCEEEEeC
Confidence 4467777643 345555667888999999999888 66544443 222 567766 3 34699999864
No 187
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=38.92 E-value=17 Score=34.23 Aligned_cols=31 Identities=29% Similarity=0.382 Sum_probs=28.3
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
++.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 23 ~l~~k~vlITGasggiG~~la~~L~~~G~~V 53 (302)
T 1w6u_A 23 SFQGKVAFITGGGTGLGKGMTTLLSSLGAQC 53 (302)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEE
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCCCEE
Confidence 4789999999999999999999999998854
No 188
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=38.88 E-value=20 Score=33.64 Aligned_cols=31 Identities=26% Similarity=0.336 Sum_probs=27.6
Q ss_pred CCCCCeEEEECCC--CCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRS--KNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS--~~VGkPLA~lL~~~~a~v 255 (477)
++.||.++|+|.+ .-+|+-++..|+.+|+.|
T Consensus 3 ~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V 35 (275)
T 2pd4_A 3 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATL 35 (275)
T ss_dssp TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEE
T ss_pred CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEE
Confidence 3689999999987 899999999999999854
No 189
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=38.84 E-value=19 Score=34.89 Aligned_cols=31 Identities=29% Similarity=0.473 Sum_probs=28.1
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
++.||.++|+|.|.-+|+-++..|+.+|+.|
T Consensus 5 ~l~~k~vlVTGas~gIG~~la~~l~~~G~~V 35 (319)
T 3ioy_A 5 DFAGRTAFVTGGANGVGIGLVRQLLNQGCKV 35 (319)
T ss_dssp CCTTCEEEEETTTSTHHHHHHHHHHHTTCEE
T ss_pred CCCCCEEEEcCCchHHHHHHHHHHHHCCCEE
Confidence 4689999999999999999999999999854
No 190
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=38.72 E-value=17 Score=34.38 Aligned_cols=31 Identities=26% Similarity=0.415 Sum_probs=28.4
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
++.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 2 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V 32 (281)
T 3zv4_A 2 KLTGEVALITGGASGLGRALVDRFVAEGARV 32 (281)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEE
T ss_pred CcCCCEEEEECCCcHHHHHHHHHHHHCcCEE
Confidence 4789999999999999999999999999854
No 191
>2x7x_A Sensor protein; transferase, sensor histidine kinase; HET: FRU; 2.64A {Bacteroides thetaiotaomicron}
Probab=38.71 E-value=38 Score=32.08 Aligned_cols=63 Identities=11% Similarity=-0.039 Sum_probs=41.3
Q ss_pred CCCEEEEEEeCCChhhHHHHHHHHHHHHHc-CCeeeeeEEecCCcccHH-hhhccccCCCCCCccEEEEc
Q psy4615 100 RVPTLTAILVGNDSASSTYVNNKMKSAAKV-GEVNALGVLYHLTLFGRS-KLINPMSIPISTGVSSHISQ 167 (477)
Q Consensus 100 ~~P~LaiI~vGdd~aS~~Yv~~k~k~a~~v-GI~~~~~~~lp~~~~t~e-~~I~~L~~N~D~~V~GILVq 167 (477)
+..+++++.-.+++-...+++...+.|++. |+++. ......+. ..+ +.++.+ - ..+|+|||+.
T Consensus 5 ~~~~Igvi~~~~~~~~~~~~~gi~~~a~~~~g~~l~-i~~~~~~~-~~~~~~i~~l--~-~~~vdgiIi~ 69 (325)
T 2x7x_A 5 PHFRIGVAQCSDDSWRHKMNDEILREAMFYNGVSVE-IRSAGDDN-SKQAEDVHYF--M-DEGVDLLIIS 69 (325)
T ss_dssp -CCEEEEEESCCSHHHHHHHHHHHHHHTTSSSCEEE-EEECTTCH-HHHHHHHHHH--H-HTTCSEEEEC
T ss_pred CCeEEEEEecCCCHHHHHHHHHHHHHHHHcCCcEEE-EeCCCCCH-HHHHHHHHHH--H-HcCCCEEEEe
Confidence 466788877654444445567778889898 99888 65544443 222 667766 3 3469999996
No 192
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=38.59 E-value=24 Score=33.66 Aligned_cols=47 Identities=21% Similarity=0.153 Sum_probs=32.9
Q ss_pred CCCCeEEEEecCCCCCC----cccccceeccCCCCccHhHHHHHHHHHHHHHHHHHH
Q psy4615 2 VKPGACVIDVGITRIKC----VSEVAGYITPVPGGVGPMTVAMLMKNTILAAKHAVI 54 (477)
Q Consensus 2 vk~gavVIDvGin~~~~----~~~~~~~iTPVPGGVGp~T~a~L~~N~v~aa~~~~~ 54 (477)
+++|++|+|+..+..+. .....++ +|+++| ..||+.+.+++.+.|..
T Consensus 204 l~~~~~v~D~~y~p~~t~~~~~a~~~G~-~~~~~G-----~~mLv~Q~~~af~~w~g 254 (271)
T 1nyt_A 204 IHPGIYCYDMFYQKGKTPFLAWCEQRGS-KRNADG-----LGMLVAQAAHAFLLWHG 254 (271)
T ss_dssp CCTTCEEEESCCCSSCCHHHHHHHHTTC-CEEECT-----HHHHHHHHHHHHHHHHS
T ss_pred cCCCCEEEEeccCCcCCHHHHHHHHcCC-CeecCC-----HHHHHHHHHHHHHHHhC
Confidence 57899999999986422 1222333 445566 67999999999988754
No 193
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=38.55 E-value=17 Score=34.69 Aligned_cols=31 Identities=26% Similarity=0.411 Sum_probs=28.6
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
.++||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 46 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V 76 (294)
T 3r3s_A 46 RLKDRKALVTGGDSGIGRAAAIAYAREGADV 76 (294)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEE
Confidence 5789999999999999999999999999854
No 194
>4a8t_A Putrescine carbamoyltransferase; trabnsferase PALO, delta-N-(phosphonoacetyl)-L- ornithine, agmatine deiminase route, agmatine catabolism; HET: PAO PGE; 1.59A {Enterococcus faecalis}
Probab=38.44 E-value=3e+02 Score=27.69 Aligned_cols=130 Identities=12% Similarity=0.108 Sum_probs=77.8
Q ss_pred EEEEEEeCCChhhHHHHHHHHHHHHHcCCeeeeeEEecCCc-----ccHHhhhccccCCCCCCccEEEEcCCCCCCCcHH
Q psy4615 103 TLTAILVGNDSASSTYVNNKMKSAAKVGEVNALGVLYHLTL-----FGRSKLINPMSIPISTGVSSHISQLPLPEHMVER 177 (477)
Q Consensus 103 ~LaiI~vGdd~aS~~Yv~~k~k~a~~vGI~~~~~~~lp~~~-----~t~e~~I~~L~~N~D~~V~GILVqlPLP~~ld~~ 177 (477)
.++.|..- |+.+. --+=..++.++|..+. .+. +.++ |+.++.++-| +.= +|+|++--| .+-...
T Consensus 65 ~la~lF~e--~STRT-R~SFE~A~~~LGg~~i-~l~-~~~ssl~kgEsl~DTarvL--s~~--~D~IviR~~--~~~~~~ 133 (339)
T 4a8t_A 65 SLGMIFQQ--SSTRT-RVSFETAMEQLGGHGE-YLA-PGQIQLGGHETIEDTSRVL--SRL--VDILMARVE--RHHSIV 133 (339)
T ss_dssp EEEEEESS--CCSHH-HHHHHHHHHHTTCEEE-EEC-CC-CCSSSSSCHHHHHHHH--HHH--CSEEEEECS--SHHHHH
T ss_pred eEEEEecC--CCchH-HHHHHHHHHHcCCeEE-EeC-cccccCCCCcCHHHHHHHH--HHh--CCEEEEecC--cHHHHH
Confidence 45555443 33322 2234788999999887 543 2222 0111344433 222 789998755 333333
Q ss_pred HHHhhcCCCCCCCCCCccchHHhhcCCCCcccCCHHH-HHHHHHHh--CCCCCCCeEEEECCCCCcchHHHHHhhhCCCC
Q psy4615 178 AVCNAVAPHKDVDGFNIVNVGRFCLDLKTLIPCTPLG-VQELIRRY--KVETFGKNAVVCGRSKNVGMPIAMLLHADGAG 254 (477)
Q Consensus 178 ~l~~aI~p~KDVDGl~p~nlg~l~~g~~~f~PcTa~A-v~~Lle~~--gi~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~ 254 (477)
.+.+.. +++-+|.| .....||=+.| ++.+.|+. |-.++|++++++|-.+-|..-+...+..-|++
T Consensus 134 ~lA~~~-------~vPVINag-----~~~~HPtQaLaDl~Ti~e~~~~G~~l~glkva~vGD~~rva~Sl~~~~~~~G~~ 201 (339)
T 4a8t_A 134 DLANCA-------TIPVINGM-----SDYNHPTQELGDLCTMVEHLPEGKKLEDCKVVFVGDATQVCFSLGLITTKMGMN 201 (339)
T ss_dssp HHHHHC-------SSCEEECC-----CSSCCHHHHHHHHHHHHHTCCTTCCGGGCEEEEESSCCHHHHHHHHHHHHTTCE
T ss_pred HHHHhC-------CCCEEECC-----CCCcCcHHHHHHHHHHHHHhhcCCCCCCCEEEEECCCchhHHHHHHHHHHcCCE
Confidence 333332 34556643 35688998887 67777777 54689999999998766767777777666764
Q ss_pred c
Q psy4615 255 V 255 (477)
Q Consensus 255 v 255 (477)
+
T Consensus 202 v 202 (339)
T 4a8t_A 202 F 202 (339)
T ss_dssp E
T ss_pred E
Confidence 4
No 195
>2fep_A Catabolite control protein A; CCPA, transcriptional regulator; HET: SEP; 2.45A {Bacillus subtilis} PDB: 2nzu_G* 1sxh_A 1sxi_A 1sxg_A* 2nzv_G* 2oen_G*
Probab=38.39 E-value=88 Score=28.86 Aligned_cols=65 Identities=12% Similarity=-0.001 Sum_probs=41.7
Q ss_pred CCCCEEEEEEeC-CChhhHHHHHHHHHHHHHcCCeeeeeEEecCCcccHH-hhhccccCCCCCCccEEEEcC
Q psy4615 99 HRVPTLTAILVG-NDSASSTYVNNKMKSAAKVGEVNALGVLYHLTLFGRS-KLINPMSIPISTGVSSHISQL 168 (477)
Q Consensus 99 g~~P~LaiI~vG-dd~aS~~Yv~~k~k~a~~vGI~~~~~~~lp~~~~t~e-~~I~~L~~N~D~~V~GILVql 168 (477)
++..++++|.-. +++--..+++...+.|++.|.... ......+. ..+ +.++.+ . ...|+|||+.-
T Consensus 14 ~~s~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~-~~~~~~~~-~~~~~~~~~l--~-~~~vdgiIi~~ 80 (289)
T 2fep_A 14 KKTTTVGVIIPDISSIFYSELARGIEDIATMYKYNII-LSNSDQNM-EKELHLLNTM--L-GKQVDGIVFMG 80 (289)
T ss_dssp --CCEEEEEESCTTSHHHHHHHHHHHHHHHHTTCEEE-EEECTTCH-HHHHHHHHHH--H-HTTCSEEEECC
T ss_pred CCCCeEEEEeCCCCCchHHHHHHHHHHHHHHcCCEEE-EEeCCCCH-HHHHHHHHHH--H-hCCCCEEEEec
Confidence 345677777643 344455667888899999999887 65543333 222 666666 3 34699999963
No 196
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=38.35 E-value=17 Score=34.76 Aligned_cols=31 Identities=29% Similarity=0.417 Sum_probs=28.5
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
++.||.++|+|.+.-+|+-++..|+.+|+.|
T Consensus 28 ~l~gk~vlVTGas~gIG~~la~~l~~~G~~V 58 (301)
T 3tjr_A 28 GFDGRAAVVTGGASGIGLATATEFARRGARL 58 (301)
T ss_dssp CSTTCEEEEETTTSHHHHHHHHHHHHTTCEE
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEE
Confidence 4789999999999999999999999999854
No 197
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=38.33 E-value=16 Score=33.22 Aligned_cols=31 Identities=39% Similarity=0.537 Sum_probs=27.9
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
++.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 2 ~l~~~~vlItGasggiG~~~a~~l~~~G~~V 32 (247)
T 2hq1_A 2 QLKGKTAIVTGSSRGLGKAIAWKLGNMGANI 32 (247)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTCEE
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCCEE
Confidence 3679999999999999999999999998854
No 198
>3brq_A HTH-type transcriptional regulator ASCG; transcriptional repressor structure escherichia coli, struct genomics, PSI-2; HET: FRU; 2.00A {Escherichia coli}
Probab=38.29 E-value=38 Score=30.94 Aligned_cols=64 Identities=9% Similarity=-0.038 Sum_probs=41.4
Q ss_pred CCCEEEEEEeC---CChhhHHHHHHHHHHHHHcCCeeeeeEEecCCcccHH-hhhccccCCCCCCccEEEEcC
Q psy4615 100 RVPTLTAILVG---NDSASSTYVNNKMKSAAKVGEVNALGVLYHLTLFGRS-KLINPMSIPISTGVSSHISQL 168 (477)
Q Consensus 100 ~~P~LaiI~vG---dd~aS~~Yv~~k~k~a~~vGI~~~~~~~lp~~~~t~e-~~I~~L~~N~D~~V~GILVql 168 (477)
...++++|.-. +++--....+...+.|++.|.+.. ......+. ..+ +.++.+ . +.+|+|||+.-
T Consensus 18 ~~~~Ig~i~~~~~~~~~~~~~~~~gi~~~~~~~g~~~~-~~~~~~~~-~~~~~~~~~l--~-~~~vdgii~~~ 85 (296)
T 3brq_A 18 STQTLGLVVTNTLYHGIYFSELLFHAARMAEEKGRQLL-LADGKHSA-EEERQAIQYL--L-DLRCDAIMIYP 85 (296)
T ss_dssp -CCEEEEEECGGGCC--CHHHHHHHHHHHHHHTTCEEE-EECCTTSH-HHHHHHHHHH--H-HTTCSEEEEEC
T ss_pred CCceEEEEeCCcccCCchHHHHHHHHHHHHHHCCCEEE-EEeCCCCH-HHHHHHHHHH--H-hcCCCEEEEec
Confidence 45678888754 344455667888899999999887 55443333 222 667766 3 34699999963
No 199
>3c3k_A Alanine racemase; structural genomics, protein structure initiative, NEW YORK research center for structural genomics, nysgxrc; 1.99A {Actinobacillus succinogenes}
Probab=38.20 E-value=64 Score=29.67 Aligned_cols=63 Identities=17% Similarity=0.114 Sum_probs=41.8
Q ss_pred CCCEEEEEEeC-CChhhHHHHHHHHHHHHHcCCeeeeeEEecCCcccHH-hhhccccCCCCCCccEEEEc
Q psy4615 100 RVPTLTAILVG-NDSASSTYVNNKMKSAAKVGEVNALGVLYHLTLFGRS-KLINPMSIPISTGVSSHISQ 167 (477)
Q Consensus 100 ~~P~LaiI~vG-dd~aS~~Yv~~k~k~a~~vGI~~~~~~~lp~~~~t~e-~~I~~L~~N~D~~V~GILVq 167 (477)
+..++++|.-. .++--..+++...+.|++.|.++. ......+. ..+ +.++.+ . ..+|+|||+.
T Consensus 7 ~~~~Igvi~~~~~~~~~~~~~~gi~~~~~~~g~~~~-~~~~~~~~-~~~~~~~~~l--~-~~~vdgiI~~ 71 (285)
T 3c3k_A 7 KTGMLLVMVSNIANPFCAAVVKGIEKTAEKNGYRIL-LCNTESDL-ARSRSCLTLL--S-GKMVDGVITM 71 (285)
T ss_dssp CCCEEEEEESCTTSHHHHHHHHHHHHHHHHTTCEEE-EEECTTCH-HHHHHHTHHH--H-TTCCSEEEEC
T ss_pred CCCEEEEEeCCCCCchHHHHHHHHHHHHHHcCCEEE-EEeCCCCH-HHHHHHHHHH--H-hCCCCEEEEe
Confidence 45678877753 344445567888899999999888 65543333 222 566666 3 3469999995
No 200
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=38.16 E-value=15 Score=34.11 Aligned_cols=31 Identities=42% Similarity=0.485 Sum_probs=28.3
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
.+.||.++|+|.+.-+|+-++..|+.+|+.|
T Consensus 26 ~l~~k~vlITGas~gIG~~la~~l~~~G~~V 56 (262)
T 3rkr_A 26 SLSGQVAVVTGASRGIGAAIARKLGSLGARV 56 (262)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEE
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCEE
Confidence 4789999999999999999999999999854
No 201
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=38.13 E-value=18 Score=33.32 Aligned_cols=31 Identities=19% Similarity=0.358 Sum_probs=28.0
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
++.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 2 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V 32 (245)
T 1uls_A 2 RLKDKAVLITGAAHGIGRATLELFAKEGARL 32 (245)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEE
Confidence 3679999999999999999999999999854
No 202
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=38.08 E-value=46 Score=30.50 Aligned_cols=62 Identities=10% Similarity=0.051 Sum_probs=42.0
Q ss_pred CCEEEEEEeCC-ChhhHHHHHHHHHHHHHcCCeeeeeEEecCCcccHH-hhhccccCCCCCCccEEEEc
Q psy4615 101 VPTLTAILVGN-DSASSTYVNNKMKSAAKVGEVNALGVLYHLTLFGRS-KLINPMSIPISTGVSSHISQ 167 (477)
Q Consensus 101 ~P~LaiI~vGd-d~aS~~Yv~~k~k~a~~vGI~~~~~~~lp~~~~t~e-~~I~~L~~N~D~~V~GILVq 167 (477)
..++++|.-+- ++--...++...+.|++.|+++. ......+. .++ +.++.+ . ..+|+||++.
T Consensus 5 ~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~-~~~~~~~~-~~~~~~~~~l--~-~~~vdgiIi~ 68 (291)
T 3l49_A 5 GKTIGITAIGTDHDWDLKAYQAQIAEIERLGGTAI-ALDAGRND-QTQVSQIQTL--I-AQKPDAIIEQ 68 (291)
T ss_dssp TCEEEEEESCCSSHHHHHHHHHHHHHHHHTTCEEE-EEECTTCH-HHHHHHHHHH--H-HHCCSEEEEE
T ss_pred CcEEEEEeCCCCChHHHHHHHHHHHHHHHcCCEEE-EEcCCCCH-HHHHHHHHHH--H-HcCCCEEEEe
Confidence 45677776643 34445567889999999999988 66655444 222 666665 2 3469999986
No 203
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=37.93 E-value=15 Score=34.23 Aligned_cols=31 Identities=26% Similarity=0.352 Sum_probs=28.3
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
.++||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V 33 (257)
T 3imf_A 3 AMKEKVVIITGGSSGMGKGMATRFAKEGARV 33 (257)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEE
Confidence 4689999999999999999999999999854
No 204
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=37.87 E-value=14 Score=34.37 Aligned_cols=32 Identities=28% Similarity=0.338 Sum_probs=29.3
Q ss_pred CCCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 224 VETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 224 i~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
.++.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 8 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V 39 (256)
T 3gaf_A 8 FHLNDAVAIVTGAAAGIGRAIAGTFAKAGASV 39 (256)
T ss_dssp TCCTTCEEEECSCSSHHHHHHHHHHHHHTCEE
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEE
Confidence 46899999999999999999999999999854
No 205
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=37.51 E-value=15 Score=34.42 Aligned_cols=31 Identities=35% Similarity=0.512 Sum_probs=28.6
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
++.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 17 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V 47 (266)
T 4egf_A 17 RLDGKRALITGATKGIGADIARAFAAAGARL 47 (266)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEE
Confidence 5789999999999999999999999999854
No 206
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=37.47 E-value=18 Score=34.02 Aligned_cols=31 Identities=29% Similarity=0.400 Sum_probs=28.2
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
++.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 19 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V 49 (277)
T 2rhc_B 19 TQDSEVALVTGATSGIGLEIARRLGKEGLRV 49 (277)
T ss_dssp CTTSCEEEEETCSSHHHHHHHHHHHHTTCEE
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCEE
Confidence 4689999999999999999999999999854
No 207
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=37.43 E-value=15 Score=34.80 Aligned_cols=27 Identities=33% Similarity=0.401 Sum_probs=23.7
Q ss_pred CCCeEEEECCCCCcchHHHHHhhhCCC
Q psy4615 227 FGKNAVVCGRSKNVGMPIAMLLHADGA 253 (477)
Q Consensus 227 ~Gk~vvViGrS~~VGkPLA~lL~~~~a 253 (477)
.||+++|+|.+..+|+-++..|+.++.
T Consensus 2 ~~~~vlVtGatG~iG~~l~~~L~~~G~ 28 (345)
T 2z1m_A 2 SGKRALITGIRGQDGAYLAKLLLEKGY 28 (345)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC
Confidence 588999999999999999999988876
No 208
>2qu7_A Putative transcriptional regulator; structural genomics, PSI-2, protein structure initiative; 2.30A {Staphylococcus saprophyticus subsp}
Probab=37.42 E-value=48 Score=30.45 Aligned_cols=65 Identities=15% Similarity=0.032 Sum_probs=42.9
Q ss_pred CCCEEEEEEeCCChhhHHHHHHHHHHHHHcCCeeeeeEEecCCcccHH-hhhccccCCCCCCccEEEEcCC
Q psy4615 100 RVPTLTAILVGNDSASSTYVNNKMKSAAKVGEVNALGVLYHLTLFGRS-KLINPMSIPISTGVSSHISQLP 169 (477)
Q Consensus 100 ~~P~LaiI~vGdd~aS~~Yv~~k~k~a~~vGI~~~~~~~lp~~~~t~e-~~I~~L~~N~D~~V~GILVqlP 169 (477)
+..++++|.-..++--...++...+.|++.|.++. ......+. ..+ +.++.+ . ...|+|||+.-.
T Consensus 7 ~~~~Igvi~~~~~~~~~~~~~gi~~~~~~~g~~~~-~~~~~~~~-~~~~~~~~~l--~-~~~vdgiI~~~~ 72 (288)
T 2qu7_A 7 RSNIIAFIVPDQNPFFTEVLTEISHECQKHHLHVA-VASSEENE-DKQQDLIETF--V-SQNVSAIILVPV 72 (288)
T ss_dssp CEEEEEEEESSCCHHHHHHHHHHHHHHGGGTCEEE-EEECTTCH-HHHHHHHHHH--H-HTTEEEEEECCS
T ss_pred CCCEEEEEECCCCchHHHHHHHHHHHHHHCCCEEE-EEeCCCCH-HHHHHHHHHH--H-HcCccEEEEecC
Confidence 45677777755444445567788889999999888 65544333 222 667766 3 346999999643
No 209
>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*
Probab=37.36 E-value=24 Score=33.39 Aligned_cols=32 Identities=31% Similarity=0.495 Sum_probs=28.4
Q ss_pred CCCCCCeEEEECCC--CCcchHHHHHhhhCCCCc
Q psy4615 224 VETFGKNAVVCGRS--KNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 224 i~l~Gk~vvViGrS--~~VGkPLA~lL~~~~a~v 255 (477)
.++.||.++|+|.+ .-+|+-++..|+.+++.|
T Consensus 4 ~~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V 37 (297)
T 1d7o_A 4 IDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEI 37 (297)
T ss_dssp CCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEE
T ss_pred cccCCCEEEEECCCCCCChHHHHHHHHHHCCCeE
Confidence 35789999999987 899999999999999854
No 210
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=37.34 E-value=15 Score=33.36 Aligned_cols=31 Identities=32% Similarity=0.498 Sum_probs=28.1
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
++.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 3 ~~~~k~vlVtGasggiG~~~a~~l~~~G~~V 33 (251)
T 1zk4_A 3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKV 33 (251)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEE
T ss_pred CCCCcEEEEeCCCChHHHHHHHHHHHCCCEE
Confidence 4689999999999999999999999998854
No 211
>3o1i_D Periplasmic protein TORT; ligand free, two component sensor, periplasmic binding prote signaling protein; HET: PE4; 2.80A {Vibrio parahaemolyticus} PDB: 3o1h_B* 3o1j_C
Probab=37.29 E-value=53 Score=30.21 Aligned_cols=68 Identities=16% Similarity=-0.023 Sum_probs=44.3
Q ss_pred CCCEEEEEEeCC-ChhhHHHHHHHHHHHHHcCCeeeeeEEecC--CcccHH-hhhccccCCCCCCccEEEEcCCCCC
Q psy4615 100 RVPTLTAILVGN-DSASSTYVNNKMKSAAKVGEVNALGVLYHL--TLFGRS-KLINPMSIPISTGVSSHISQLPLPE 172 (477)
Q Consensus 100 ~~P~LaiI~vGd-d~aS~~Yv~~k~k~a~~vGI~~~~~~~lp~--~~~t~e-~~I~~L~~N~D~~V~GILVqlPLP~ 172 (477)
++.++++|.-.- ++--...++...+.|++.|+++. .+.... +. .++ +.++.+ - ...++||++.-.-+.
T Consensus 4 ~~~~Igvi~~~~~~~~~~~~~~g~~~~a~~~g~~~~-~~~~~~~~~~-~~~~~~~~~~--~-~~~vdgiii~~~~~~ 75 (304)
T 3o1i_D 4 SDEKICAIYPHLKDSYWLSVNYGMVSEAEKQGVNLR-VLEAGGYPNK-SRQEQQLALC--T-QWGANAIILGTVDPH 75 (304)
T ss_dssp -CCEEEEEESCSCSHHHHHHHHHHHHHHHHHTCEEE-EEECSSTTCH-HHHHHHHHHH--H-HHTCSEEEECCSSTT
T ss_pred CCcEEEEEeCCCCCcHHHHHHHHHHHHHHHcCCeEE-EEcCCCCCCH-HHHHHHHHHH--H-HcCCCEEEEeCCChh
Confidence 455677776543 44445567888899999999998 776654 43 222 666665 2 246999999744333
No 212
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=37.28 E-value=16 Score=33.84 Aligned_cols=31 Identities=39% Similarity=0.507 Sum_probs=28.1
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
++.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V 32 (260)
T 2qq5_A 2 PMNGQVCVVTGASRGIGRGIALQLCKAGATV 32 (260)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEE
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEE
Confidence 3689999999999999999999999999854
No 213
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=37.27 E-value=19 Score=33.77 Aligned_cols=32 Identities=38% Similarity=0.406 Sum_probs=29.0
Q ss_pred CCCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 224 VETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 224 i~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
.++.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V 48 (273)
T 1ae1_A 17 WSLKGTTALVTGGSKGIGYAIVEELAGLGARV 48 (273)
T ss_dssp CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEE
T ss_pred CCCCCCEEEEECCcchHHHHHHHHHHHCCCEE
Confidence 35789999999999999999999999999854
No 214
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Probab=37.20 E-value=16 Score=33.82 Aligned_cols=32 Identities=31% Similarity=0.505 Sum_probs=28.7
Q ss_pred CCCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 224 VETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 224 i~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
.++.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 11 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V 42 (247)
T 1uzm_A 11 PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKV 42 (247)
T ss_dssp CCCCCCEEEETTTTSHHHHHHHHHHHHTTCEE
T ss_pred ccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEE
Confidence 46789999999999999999999999998843
No 215
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=37.19 E-value=18 Score=34.18 Aligned_cols=30 Identities=30% Similarity=0.507 Sum_probs=27.3
Q ss_pred CCCCeEEEECCC--CCcchHHHHHhhhCCCCc
Q psy4615 226 TFGKNAVVCGRS--KNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 226 l~Gk~vvViGrS--~~VGkPLA~lL~~~~a~v 255 (477)
+.||.++|+|.+ .-+|+-++..|+.+++.|
T Consensus 19 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V 50 (285)
T 2p91_A 19 LEGKRALITGVANERSIAYGIAKSFHREGAQL 50 (285)
T ss_dssp TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEE
T ss_pred cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEE
Confidence 789999999987 899999999999999854
No 216
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=37.14 E-value=19 Score=34.02 Aligned_cols=31 Identities=29% Similarity=0.355 Sum_probs=28.3
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
.+.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 15 ~l~~k~vlVTGasggIG~~la~~l~~~G~~V 45 (303)
T 1yxm_A 15 LLQGQVAIVTGGATGIGKAIVKELLELGSNV 45 (303)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEE
Confidence 5789999999999999999999999998854
No 217
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=37.05 E-value=16 Score=34.27 Aligned_cols=32 Identities=41% Similarity=0.586 Sum_probs=29.1
Q ss_pred CCCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 224 VETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 224 i~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
.+++||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 6 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V 37 (267)
T 3t4x_A 6 MQLKGKTALVTGSTAGIGKAIATSLVAEGANV 37 (267)
T ss_dssp CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEE
T ss_pred cccCCCEEEEeCCCcHHHHHHHHHHHHCCCEE
Confidence 46789999999999999999999999999854
No 218
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=36.99 E-value=19 Score=33.96 Aligned_cols=31 Identities=23% Similarity=0.315 Sum_probs=28.4
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
.++||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 24 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~V 54 (277)
T 4fc7_A 24 LLRDKVAFITGGGSGIGFRIAEIFMRHGCHT 54 (277)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHTTTCEE
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEE
Confidence 4789999999999999999999999999854
No 219
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=36.92 E-value=19 Score=33.83 Aligned_cols=32 Identities=31% Similarity=0.413 Sum_probs=28.9
Q ss_pred CCCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 224 VETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 224 i~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
.+++||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 5 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V 36 (270)
T 1yde_A 5 TRYAGKVVVVTGGGRGIGAGIVRAFVNSGARV 36 (270)
T ss_dssp CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEE
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEE
Confidence 35789999999999999999999999999854
No 220
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=36.90 E-value=15 Score=35.23 Aligned_cols=29 Identities=21% Similarity=0.295 Sum_probs=22.6
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCC
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGA 253 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a 253 (477)
+..+|+++|+|.+..+|+.++..|+.++.
T Consensus 16 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~ 44 (347)
T 4id9_A 16 PRGSHMILVTGSAGRVGRAVVAALRTQGR 44 (347)
T ss_dssp -----CEEEETTTSHHHHHHHHHHHHTTC
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhCCC
Confidence 56789999999999999999999988877
No 221
>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*
Probab=36.84 E-value=14 Score=36.15 Aligned_cols=32 Identities=25% Similarity=0.338 Sum_probs=29.1
Q ss_pred CCCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 224 VETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 224 i~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
.++.||.++|+|.+.-+|+-++..|+.+|+.|
T Consensus 5 ~~l~gk~~lVTGas~GIG~~~a~~La~~Ga~V 36 (319)
T 1gz6_A 5 LRFDGRVVLVTGAGGGLGRAYALAFAERGALV 36 (319)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEE
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEE
Confidence 46789999999999999999999999999854
No 222
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=36.74 E-value=16 Score=33.91 Aligned_cols=30 Identities=43% Similarity=0.604 Sum_probs=27.6
Q ss_pred CCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 226 TFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 226 l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
+.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V 31 (260)
T 1x1t_A 2 LKGKVAVVTGSTSGIGLGIATALAAQGADI 31 (260)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHcCCEE
Confidence 579999999999999999999999999854
No 223
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}
Probab=36.70 E-value=14 Score=34.15 Aligned_cols=32 Identities=31% Similarity=0.372 Sum_probs=25.3
Q ss_pred CCCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 224 VETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 224 i~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
.+++||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 5 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V 36 (257)
T 3tl3_A 5 MEIRDAVAVVTGGASGLGLATTKRLLDAGAQV 36 (257)
T ss_dssp -----CEEEEETTTSHHHHHHHHHHHHHTCEE
T ss_pred ceecCCEEEEeCCCCHHHHHHHHHHHHCCCEE
Confidence 35789999999999999999999999999854
No 224
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=36.50 E-value=20 Score=33.96 Aligned_cols=31 Identities=39% Similarity=0.448 Sum_probs=28.4
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
++.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 26 ~l~~k~vlVTGas~gIG~aia~~L~~~G~~V 56 (276)
T 2b4q_A 26 SLAGRIALVTGGSRGIGQMIAQGLLEAGARV 56 (276)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEE
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEE
Confidence 4789999999999999999999999999854
No 225
>3huu_A Transcription regulator like protein; PSI-II, NYSGXRC, LAC I, STR genomics, protein structure initiative; 1.95A {Staphylococcus haemolyticus}
Probab=36.43 E-value=46 Score=30.99 Aligned_cols=64 Identities=13% Similarity=0.027 Sum_probs=41.1
Q ss_pred CCCEEEEEEeC------CChhhHHHHHHHHHHHHHcCCeeeeeEEecCCcccHH-hhhccccCCCCCCccEEEEcC
Q psy4615 100 RVPTLTAILVG------NDSASSTYVNNKMKSAAKVGEVNALGVLYHLTLFGRS-KLINPMSIPISTGVSSHISQL 168 (477)
Q Consensus 100 ~~P~LaiI~vG------dd~aS~~Yv~~k~k~a~~vGI~~~~~~~lp~~~~t~e-~~I~~L~~N~D~~V~GILVql 168 (477)
+...+++|.-. .++--...++...+.|++.|.... ......+. ..+ +.++.+ ....|+|||+.-
T Consensus 21 ~~~~Igvi~~~~~~~~~~~~~~~~~~~gi~~~a~~~g~~~~-~~~~~~~~-~~~~~~~~~l---~~~~vdgiIi~~ 91 (305)
T 3huu_A 21 KTLTIGLIQKSSAPEIRQNPFNSDVLNGINQACNVRGYSTR-MTVSENSG-DLYHEVKTMI---QSKSVDGFILLY 91 (305)
T ss_dssp CCCEEEEECSCCSHHHHTSHHHHHHHHHHHHHHHHHTCEEE-ECCCSSHH-HHHHHHHHHH---HTTCCSEEEESS
T ss_pred CCCEEEEEeCCCccccccCcHHHHHHHHHHHHHHHCCCEEE-EEeCCCCh-HHHHHHHHHH---HhCCCCEEEEeC
Confidence 45567777654 344445567888899999999887 55433333 222 555655 334799999953
No 226
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=36.36 E-value=16 Score=33.68 Aligned_cols=32 Identities=25% Similarity=0.280 Sum_probs=28.8
Q ss_pred CCCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 224 VETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 224 i~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
.++.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 10 ~~l~~k~vlITGasggiG~~la~~l~~~G~~V 41 (266)
T 1xq1_A 10 WSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVI 41 (266)
T ss_dssp TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEE
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEE
Confidence 35789999999999999999999999998854
No 227
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=36.32 E-value=19 Score=33.32 Aligned_cols=31 Identities=39% Similarity=0.374 Sum_probs=28.0
Q ss_pred CCCCCeEEEECCC--CCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRS--KNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS--~~VGkPLA~lL~~~~a~v 255 (477)
++.||.++|+|.+ .-+|+-++..|+.+++.|
T Consensus 17 ~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v 49 (267)
T 3gdg_A 17 SLKGKVVVVTGASGPKGMGIEAARGCAEMGAAV 49 (267)
T ss_dssp CCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEE
T ss_pred CcCCCEEEEECCCCCCChHHHHHHHHHHCCCeE
Confidence 5789999999988 899999999999999854
No 228
>3egc_A Putative ribose operon repressor; structural genomics, unknown function, DNA-binding, transcri transcription regulation, PSI-2; 2.35A {Burkholderia thailandensis}
Probab=36.30 E-value=60 Score=29.81 Aligned_cols=65 Identities=11% Similarity=-0.036 Sum_probs=43.9
Q ss_pred CCCEEEEEEeCC-ChhhHHHHHHHHHHHHHcCCeeeeeEEecCCcccHH-hhhccccCCCCCCccEEEEcCC
Q psy4615 100 RVPTLTAILVGN-DSASSTYVNNKMKSAAKVGEVNALGVLYHLTLFGRS-KLINPMSIPISTGVSSHISQLP 169 (477)
Q Consensus 100 ~~P~LaiI~vGd-d~aS~~Yv~~k~k~a~~vGI~~~~~~~lp~~~~t~e-~~I~~L~~N~D~~V~GILVqlP 169 (477)
+..+++++.-.- ++-....++...+.|++.|.++. .+....+. .++ +.++.+ . ...|+|||+.-.
T Consensus 7 ~~~~Igvv~~~~~~~~~~~~~~gi~~~a~~~g~~~~-~~~~~~~~-~~~~~~~~~l--~-~~~vdgiIi~~~ 73 (291)
T 3egc_A 7 RSNVVGLIVSDIENVFFAEVASGVESEARHKGYSVL-LANTAEDI-VREREAVGQF--F-ERRVDGLILAPS 73 (291)
T ss_dssp CCCEEEEEESCTTSHHHHHHHHHHHHHHHHTTCEEE-EEECTTCH-HHHHHHHHHH--H-HTTCSEEEECCC
T ss_pred CCcEEEEEECCCcchHHHHHHHHHHHHHHHCCCEEE-EEeCCCCH-HHHHHHHHHH--H-HCCCCEEEEeCC
Confidence 456777776432 34445567888999999999998 77655554 223 666666 3 346999998543
No 229
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=36.27 E-value=20 Score=33.62 Aligned_cols=31 Identities=26% Similarity=0.430 Sum_probs=28.0
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
++.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 3 ~l~~k~vlITGas~gIG~aia~~l~~~G~~V 33 (263)
T 2a4k_A 3 RLSGKTILVTGAASGIGRAALDLFAREGASL 33 (263)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEE
Confidence 3689999999999999999999999998854
No 230
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=36.22 E-value=23 Score=37.43 Aligned_cols=45 Identities=40% Similarity=0.465 Sum_probs=35.2
Q ss_pred CCHHHHHHHHHHhCCCCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 210 CTPLGVQELIRRYKVETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 210 cTa~Av~~Lle~~gi~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
|.-..+-.+.+..++.+.||+++|+|-+. +|+.+|.++...|+.|
T Consensus 229 ~~eslvdgI~Ratg~~L~GKTVgVIG~G~-IGr~vA~~lrafGa~V 273 (464)
T 3n58_A 229 CKESLVDGIRRGTDVMMAGKVAVVCGYGD-VGKGSAQSLAGAGARV 273 (464)
T ss_dssp HHHHHHHHHHHHHCCCCTTCEEEEECCSH-HHHHHHHHHHHTTCEE
T ss_pred chHHHHHHHHHhcCCcccCCEEEEECcCH-HHHHHHHHHHHCCCEE
Confidence 33334444556689999999999999665 8999999999888854
No 231
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=36.16 E-value=32 Score=33.45 Aligned_cols=47 Identities=23% Similarity=0.277 Sum_probs=33.4
Q ss_pred CCCCCeEEEEecCCCCCC-c---ccccceeccCCCCccHhHHHHHHHHHHHHHHHHHH
Q psy4615 1 MVKPGACVIDVGITRIKC-V---SEVAGYITPVPGGVGPMTVAMLMKNTILAAKHAVI 54 (477)
Q Consensus 1 ~vk~gavVIDvGin~~~~-~---~~~~~~iTPVPGGVGp~T~a~L~~N~v~aa~~~~~ 54 (477)
++++|++|+|+..+..+. . ....+ .++++| ..||+.+.+++.+.|..
T Consensus 229 ~l~~~~~v~D~~y~P~~T~ll~~A~~~G-~~~v~G------l~MLv~Qa~~af~~w~g 279 (297)
T 2egg_A 229 RLRPGVIVSDIIYNPLETKWLKEAKARG-ARVQNG------VGMLVYQGALAFEKWTG 279 (297)
T ss_dssp TCCTTCEEEECCCSSSSCHHHHHHHHTT-CEEECS------HHHHHHHHHHHHHHHHS
T ss_pred HcCCCCEEEEcCCCCCCCHHHHHHHHCc-CEEECC------HHHHHHHHHHHHHHHhC
Confidence 468999999999986432 1 12222 356776 67999999999888754
No 232
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=36.16 E-value=21 Score=33.23 Aligned_cols=31 Identities=39% Similarity=0.596 Sum_probs=27.8
Q ss_pred CCCCCeEEEECCC--CCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRS--KNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS--~~VGkPLA~lL~~~~a~v 255 (477)
++.||.++|+|.+ .-+|+-++..|+.+++.|
T Consensus 5 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V 37 (261)
T 2wyu_A 5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEV 37 (261)
T ss_dssp CCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEE
T ss_pred CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEE
Confidence 5789999999987 899999999999998854
No 233
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=36.14 E-value=16 Score=33.57 Aligned_cols=31 Identities=35% Similarity=0.471 Sum_probs=28.2
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
++.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 18 ~~~~k~vlItGasggiG~~la~~l~~~G~~v 48 (274)
T 1ja9_A 18 PLAGKVALTTGAGRGIGRGIAIELGRRGASV 48 (274)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEE
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEE
Confidence 5789999999999999999999999998754
No 234
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=35.91 E-value=19 Score=33.74 Aligned_cols=31 Identities=29% Similarity=0.328 Sum_probs=28.1
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
++.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 29 ~l~~k~vlVTGasggIG~~la~~l~~~G~~V 59 (279)
T 1xg5_A 29 RWRDRLALVTGASGGIGAAVARALVQQGLKV 59 (279)
T ss_dssp GGTTCEEEEESTTSHHHHHHHHHHHHTTCEE
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEE
Confidence 3689999999999999999999999998854
No 235
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=35.89 E-value=20 Score=33.94 Aligned_cols=31 Identities=39% Similarity=0.603 Sum_probs=28.4
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
++.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 6 ~l~~k~vlVTGas~GIG~aia~~l~~~G~~V 36 (285)
T 3sc4_A 6 SLRGKTMFISGGSRGIGLAIAKRVAADGANV 36 (285)
T ss_dssp CCTTCEEEEESCSSHHHHHHHHHHHTTTCEE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEE
Confidence 5789999999999999999999999999844
No 236
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=35.88 E-value=17 Score=34.51 Aligned_cols=31 Identities=39% Similarity=0.545 Sum_probs=28.3
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
++.||.++|+|.+.-+|+-++..|+.+|+.|
T Consensus 5 ~l~gk~vlVTGas~GIG~aia~~la~~G~~V 35 (280)
T 3tox_A 5 RLEGKIAIVTGASSGIGRAAALLFAREGAKV 35 (280)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEE
Confidence 4789999999999999999999999999854
No 237
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=35.86 E-value=20 Score=33.32 Aligned_cols=30 Identities=37% Similarity=0.466 Sum_probs=27.6
Q ss_pred CCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 226 TFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 226 l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
+.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V 34 (267)
T 2gdz_A 5 VNGKVALVTGAAQGIGRAFAEALLLKGAKV 34 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEE
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHCCCEE
Confidence 579999999999999999999999999854
No 238
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=35.66 E-value=22 Score=33.10 Aligned_cols=30 Identities=30% Similarity=0.460 Sum_probs=27.3
Q ss_pred CCCCeEEEECCC--CCcchHHHHHhhhCCCCc
Q psy4615 226 TFGKNAVVCGRS--KNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 226 l~Gk~vvViGrS--~~VGkPLA~lL~~~~a~v 255 (477)
+.||.++|+|.+ .-+|+-++..|+.+++.|
T Consensus 7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V 38 (265)
T 1qsg_A 7 LSGKRILVTGVASKLSIAYGIAQAMHREGAEL 38 (265)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEE
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEE
Confidence 679999999988 899999999999999854
No 239
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=35.59 E-value=17 Score=35.03 Aligned_cols=32 Identities=28% Similarity=0.474 Sum_probs=29.1
Q ss_pred CCCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 224 VETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 224 i~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
.++.||.++|+|.+.-+|+-++..|+.+|+.|
T Consensus 37 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V 68 (293)
T 3rih_A 37 FDLSARSVLVTGGTKGIGRGIATVFARAGANV 68 (293)
T ss_dssp TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEE
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEE
Confidence 36799999999999999999999999999854
No 240
>3ksm_A ABC-type sugar transport system, periplasmic COMP; periplasmic component, PSI- 11023L, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis}
Probab=35.39 E-value=62 Score=29.16 Aligned_cols=64 Identities=13% Similarity=-0.010 Sum_probs=39.8
Q ss_pred CEEEEEEeC-CChhhHHHHHHHHHHHHHcCCeeeeeEEecCCcc-cHH-hhhccccCCCCCCccEEEEcC
Q psy4615 102 PTLTAILVG-NDSASSTYVNNKMKSAAKVGEVNALGVLYHLTLF-GRS-KLINPMSIPISTGVSSHISQL 168 (477)
Q Consensus 102 P~LaiI~vG-dd~aS~~Yv~~k~k~a~~vGI~~~~~~~lp~~~~-t~e-~~I~~L~~N~D~~V~GILVql 168 (477)
|++++|.-+ +++-.....+...+.|++.|.++. ......+.+ .++ +.++.+ -+..+|+||++.-
T Consensus 1 ~~Ig~i~~~~~~~~~~~~~~gi~~~~~~~g~~~~-~~~~~~~~~~~~~~~~i~~l--~~~~~vdgii~~~ 67 (276)
T 3ksm_A 1 PKLLLVLKGDSNAYWRQVYLGAQKAADEAGVTLL-HRSTKDDGDIAGQIQILSYH--LSQAPPDALILAP 67 (276)
T ss_dssp CEEEEECSCSSSTHHHHHHHHHHHHHHHHTCEEE-ECCCSSTTCHHHHHHHHHHH--HHHSCCSEEEECC
T ss_pred CeEEEEeCCCCChHHHHHHHHHHHHHHHcCCEEE-EECCCCCCCHHHHHHHHHHH--HHhCCCCEEEEeC
Confidence 456666543 344456667888999999999888 554322220 112 667666 4433399999963
No 241
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=35.26 E-value=17 Score=34.23 Aligned_cols=31 Identities=35% Similarity=0.476 Sum_probs=28.5
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
++.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 26 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V 56 (283)
T 1g0o_A 26 SLEGKVALVTGAGRGIGREMAMELGRRGCKV 56 (283)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEE
Confidence 5789999999999999999999999999854
No 242
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=35.26 E-value=20 Score=33.49 Aligned_cols=31 Identities=23% Similarity=0.489 Sum_probs=27.0
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
++.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 18 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V 48 (253)
T 2nm0_A 18 SHMSRSVLVTGGNRGIGLAIARAFADAGDKV 48 (253)
T ss_dssp --CCCEEEEETTTSHHHHHHHHHHHHTTCEE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEE
Confidence 5789999999999999999999999999844
No 243
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=35.11 E-value=15 Score=33.57 Aligned_cols=31 Identities=26% Similarity=0.478 Sum_probs=28.2
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
++.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 11 ~~~~k~vlITGasggiG~~~a~~l~~~G~~V 41 (265)
T 1h5q_A 11 SFVNKTIIVTGGNRGIGLAFTRAVAAAGANV 41 (265)
T ss_dssp CCTTEEEEEETTTSHHHHHHHHHHHHTTEEE
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCeE
Confidence 5789999999999999999999999998754
No 244
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=35.01 E-value=21 Score=33.70 Aligned_cols=32 Identities=28% Similarity=0.286 Sum_probs=28.5
Q ss_pred CCCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 224 VETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 224 i~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
..+.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 40 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V 71 (285)
T 2c07_A 40 YCGENKVALVTGAGRGIGREIAKMLAKSVSHV 71 (285)
T ss_dssp CCCSSCEEEEESTTSHHHHHHHHHHTTTSSEE
T ss_pred ccCCCCEEEEECCCcHHHHHHHHHHHHcCCEE
Confidence 35789999999999999999999999988754
No 245
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=34.77 E-value=15 Score=34.93 Aligned_cols=32 Identities=38% Similarity=0.418 Sum_probs=25.4
Q ss_pred CCCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 224 VETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 224 i~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
.+++||.++|+|.+.-+|+-++..|+.+|+.|
T Consensus 29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V 60 (281)
T 4dry_A 29 GSGEGRIALVTGGGTGVGRGIAQALSAEGYSV 60 (281)
T ss_dssp -----CEEEETTTTSHHHHHHHHHHHHTTCEE
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEE
Confidence 46789999999999999999999999999854
No 246
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=34.76 E-value=16 Score=33.48 Aligned_cols=31 Identities=29% Similarity=0.442 Sum_probs=28.0
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
++.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 4 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V 34 (261)
T 1gee_A 4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKV 34 (261)
T ss_dssp GGTTCEEEETTCSSHHHHHHHHHHHHTTCEE
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEE
Confidence 4679999999999999999999999998854
No 247
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=34.71 E-value=18 Score=34.20 Aligned_cols=32 Identities=34% Similarity=0.378 Sum_probs=29.1
Q ss_pred CCCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 224 VETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 224 i~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
..+.||.++|+|.+.-+|+-++..|+.+|+.|
T Consensus 24 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V 55 (270)
T 3ftp_A 24 KTLDKQVAIVTGASRGIGRAIALELARRGAMV 55 (270)
T ss_dssp CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEE
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEE
Confidence 36789999999999999999999999999854
No 248
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=34.61 E-value=22 Score=33.65 Aligned_cols=31 Identities=29% Similarity=0.438 Sum_probs=28.5
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
++.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 26 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V 56 (280)
T 4da9_A 26 QKARPVAIVTGGRRGIGLGIARALAASGFDI 56 (280)
T ss_dssp CCCCCEEEEETTTSHHHHHHHHHHHHTTCEE
T ss_pred ccCCCEEEEecCCCHHHHHHHHHHHHCCCeE
Confidence 5789999999999999999999999999854
No 249
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=34.53 E-value=16 Score=35.04 Aligned_cols=31 Identities=29% Similarity=0.549 Sum_probs=28.3
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
++.||.++|+|.+.-+|+-++..|+.+|+.|
T Consensus 23 ~l~~k~vlVTGas~gIG~aia~~L~~~G~~V 53 (297)
T 1xhl_A 23 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQV 53 (297)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEE
Confidence 4789999999999999999999999999854
No 250
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=34.46 E-value=19 Score=34.85 Aligned_cols=30 Identities=20% Similarity=0.248 Sum_probs=27.0
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhh--CCCC
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHA--DGAG 254 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~--~~a~ 254 (477)
++.||+++|+|.+..+|+.++..|+. ++..
T Consensus 7 ~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~ 38 (362)
T 3sxp_A 7 ELENQTILITGGAGFVGSNLAFHFQENHPKAK 38 (362)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHHCTTSE
T ss_pred hcCCCEEEEECCCCHHHHHHHHHHHhhCCCCe
Confidence 57899999999999999999999998 7763
No 251
>3sds_A Ornithine carbamoyltransferase, mitochondrial; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.80A {Coccidioides immitis}
Probab=34.39 E-value=3.8e+02 Score=27.08 Aligned_cols=130 Identities=12% Similarity=0.081 Sum_probs=79.3
Q ss_pred EEEEEEeCCChhhHHHHHHHHHHHHHcCCeeeeeEEecCCc-----ccHHhhhccccCCCCCCccEEEEcCCCCCCCcHH
Q psy4615 103 TLTAILVGNDSASSTYVNNKMKSAAKVGEVNALGVLYHLTL-----FGRSKLINPMSIPISTGVSSHISQLPLPEHMVER 177 (477)
Q Consensus 103 ~LaiI~vGdd~aS~~Yv~~k~k~a~~vGI~~~~~~~lp~~~-----~t~e~~I~~L~~N~D~~V~GILVqlPLP~~ld~~ 177 (477)
.++.|..- ++. .---+=..++.++|.++. .+.- .++ |+.++.++-| +.= +|+|++-.| .|-+.+
T Consensus 68 ~va~lF~e--~ST-RTR~SFE~A~~~LGg~~i-~l~~-~~s~l~kgEsl~DTarvL--s~~--~D~IviR~~--~~~~~~ 136 (353)
T 3sds_A 68 TVAMMFSK--RST-RTRVSTEGAVVKMGGHPM-FLGK-DDIQLGVNESLYDTSVVI--SSM--VSCIVARVG--PHSDIA 136 (353)
T ss_dssp EEEEEESS--CCH-HHHHHHHHHHHHTTCEEE-EECT-TTC--CCSSCHHHHHHHH--HTS--CSEEEEECS--SHHHHH
T ss_pred EEEEEecC--Cch-hHHHHHHHHHHHcCCeEE-ecCC-ccccccCCccHHHHHHHH--HHh--cCEEEEEeC--ChHHHH
Confidence 45555543 222 222344788999999876 4421 111 0222445544 322 789988644 333333
Q ss_pred HHHhhcCCCCCCCCCCccchHHhhcCCCCcccCCHHH-HHHHHHHhCC------------CCCCCeEEEECCCCCcchHH
Q psy4615 178 AVCNAVAPHKDVDGFNIVNVGRFCLDLKTLIPCTPLG-VQELIRRYKV------------ETFGKNAVVCGRSKNVGMPI 244 (477)
Q Consensus 178 ~l~~aI~p~KDVDGl~p~nlg~l~~g~~~f~PcTa~A-v~~Lle~~gi------------~l~Gk~vvViGrS~~VGkPL 244 (477)
.+.+.. +++-+|.| ...+.||=+.+ ++.+.|+.|- .++|++++++|-.+.|..-+
T Consensus 137 ~lA~~s-------~vPVINag-----~d~~HPtQaLaDl~TI~E~~G~~~~~~~~~~~~~~l~glkva~vGD~~nva~Sl 204 (353)
T 3sds_A 137 NLAKHS-------SVPVINAL-----CDTFHPLQAIADFLTIHESFASQSATHGTHPSSLGLEGLKIAWVGDANNVLFDL 204 (353)
T ss_dssp HHHHHC-------SSCEEEEE-----CSSCCHHHHHHHHHHHHHHTC--------CTTCCSCTTCEEEEESCCCHHHHHH
T ss_pred HHHhhC-------CCCEEECC-----CCCCCcHHHHHHHHHHHHHhCCCcccccccccccccCCCEEEEECCCchHHHHH
Confidence 443332 34556643 34688998887 7788888874 25999999999988887777
Q ss_pred HHHhhhCCCCc
Q psy4615 245 AMLLHADGAGV 255 (477)
Q Consensus 245 A~lL~~~~a~v 255 (477)
+..+..-|+++
T Consensus 205 ~~~l~~lG~~v 215 (353)
T 3sds_A 205 AIAATKMGVNV 215 (353)
T ss_dssp HHHHHHTTCEE
T ss_pred HHHHHHcCCEE
Confidence 77777777654
No 252
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=34.30 E-value=18 Score=33.73 Aligned_cols=31 Identities=32% Similarity=0.477 Sum_probs=28.1
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
++.||.++|+|.+.-+|+-++..|+.+|+.|
T Consensus 3 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V 33 (278)
T 1spx_A 3 RFAEKVAIITGSSNGIGRATAVLFAREGAKV 33 (278)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEE
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEE
Confidence 3689999999999999999999999999854
No 253
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=34.26 E-value=16 Score=35.34 Aligned_cols=31 Identities=29% Similarity=0.434 Sum_probs=28.5
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
.+.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 24 ~l~gk~vlVTGas~GIG~aia~~la~~G~~V 54 (322)
T 3qlj_A 24 VVDGRVVIVTGAGGGIGRAHALAFAAEGARV 54 (322)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEE
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEE
Confidence 4789999999999999999999999999854
No 254
>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}
Probab=34.21 E-value=1e+02 Score=28.45 Aligned_cols=65 Identities=14% Similarity=-0.043 Sum_probs=43.3
Q ss_pred CCCEEEEEEe-----CCChhhHHHHHHHHHHHHHcCCeeeeeEEecCCcccHHhhhccccCCCCCCccEEEEcCC
Q psy4615 100 RVPTLTAILV-----GNDSASSTYVNNKMKSAAKVGEVNALGVLYHLTLFGRSKLINPMSIPISTGVSSHISQLP 169 (477)
Q Consensus 100 ~~P~LaiI~v-----Gdd~aS~~Yv~~k~k~a~~vGI~~~~~~~lp~~~~t~e~~I~~L~~N~D~~V~GILVqlP 169 (477)
+...+++|.- -.++--...++...+.|++.|.... ........ .+.+.++.+ . ..+|+|||+.-+
T Consensus 5 ~s~~Igvi~~~~~~~~~~~~~~~~~~gi~~~a~~~g~~~~-~~~~~~~~-~~~~~~~~l--~-~~~vdGiIi~~~ 74 (294)
T 3qk7_A 5 RTDAIALAYPSRPRVLNNSTFLEMISWIGIELGKRGLDLL-LIPDEPGE-KYQSLIHLV--E-TRRVDALIVAHT 74 (294)
T ss_dssp CCCEEEEEEESCSGGGSCHHHHHHHHHHHHHHHHTTCEEE-EEEECTTC-CCHHHHHHH--H-HTCCSEEEECSC
T ss_pred ccceEEEEecCCCccccChhHHHHHHHHHHHHHHCCCEEE-EEeCCChh-hHHHHHHHH--H-cCCCCEEEEeCC
Confidence 4567888875 2345555667888999999999998 66654322 222555555 2 346999999644
No 255
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=34.13 E-value=53 Score=31.66 Aligned_cols=134 Identities=15% Similarity=0.230 Sum_probs=75.2
Q ss_pred EEEEEEeCCChhhHHHHHHHHHHHHHcCCeeeeeEEecCCcccHHhhhccccCCCCCCccEEEEcCCCCCCCcHHHHHhh
Q psy4615 103 TLTAILVGNDSASSTYVNNKMKSAAKVGEVNALGVLYHLTLFGRSKLINPMSIPISTGVSSHISQLPLPEHMVERAVCNA 182 (477)
Q Consensus 103 ~LaiI~vGdd~aS~~Yv~~k~k~a~~vGI~~~~~~~lp~~~~t~e~~I~~L~~N~D~~V~GILVqlPLP~~ld~~~l~~a 182 (477)
+|..-.+|+. .|.+=. .-..++++.|++.. ...++++ ..++.++.+ - +.++.|.-|-.|.-..+=. +++.
T Consensus 7 ~~~~~viG~P-hS~SP~-~hn~~~~~~gl~~~-Y~~~~~~--~l~~~~~~~--~-~~~~~G~nVTiP~K~~i~~--~~d~ 76 (271)
T 1npy_A 7 QLCMSLSGRP-SNFGTT-FHNYLYDKLGLNFI-YKAFTTQ--DIEHAIKGV--R-ALGIRGCAVSMPFKETCMP--FLDE 76 (271)
T ss_dssp EEEEEECSSC-CSHHHH-HHHHHHHHHTCCEE-EEEECCS--CHHHHHHHH--H-HHTCCEEEECTTCTTTTGG--GCSE
T ss_pred eEEEEEECCC-CcccHH-HHHHHHHHcCCCcE-EEeechh--hHHHHHHHh--c-cCCCCeEEECcCCHHHHHH--HHHH
Confidence 4423456766 665544 33568899999988 6666622 233445544 1 2257899999997653311 1111
Q ss_pred cCC-CCCCCCCCcc-c-hHHhhcCCCCcccCCHHHHHHHHHHhCCCCCCCeEEEECCCCCcchHHHHHhhhCCC
Q psy4615 183 VAP-HKDVDGFNIV-N-VGRFCLDLKTLIPCTPLGVQELIRRYKVETFGKNAVVCGRSKNVGMPIAMLLHADGA 253 (477)
Q Consensus 183 I~p-~KDVDGl~p~-n-lg~l~~g~~~f~PcTa~Av~~Lle~~gi~l~Gk~vvViGrS~~VGkPLA~lL~~~~a 253 (477)
+++ .+.+-..+.. + -|++. |.. ....|..+-|++.+++ .+++++|+| ..-.++.++..|...++
T Consensus 77 ~~~~A~~iGAvNTi~~~~g~l~-g~N----TD~~G~~~~l~~~~~~-~~~~vlvlG-aGgaarav~~~L~~~G~ 143 (271)
T 1npy_A 77 IHPSAQAIESVNTIVNDNGFLR-AYN----TDYIAIVKLIEKYHLN-KNAKVIVHG-SGGMAKAVVAAFKNSGF 143 (271)
T ss_dssp ECHHHHTTTCCCEEEEETTEEE-EEC----HHHHHHHHHHHHTTCC-TTSCEEEEC-SSTTHHHHHHHHHHTTC
T ss_pred hhHHHHHhCCCCceECcCCEEE-eec----CCHHHHHHHHHHhCCC-CCCEEEEEC-CcHHHHHHHHHHHHCCC
Confidence 110 0011111110 0 01111 100 1335777888888876 689999999 55668999988888876
No 256
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=34.05 E-value=20 Score=33.36 Aligned_cols=31 Identities=35% Similarity=0.409 Sum_probs=27.8
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
++.||.++|+|.+.-+|+-++..|+.+|+.|
T Consensus 4 ~~~~k~~lVTGas~GIG~aia~~l~~~G~~V 34 (250)
T 3nyw_A 4 EKQKGLAIITGASQGIGAVIAAGLATDGYRV 34 (250)
T ss_dssp -CCCCEEEEESTTSHHHHHHHHHHHHHTCEE
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHCCCEE
Confidence 5789999999999999999999999999854
No 257
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=34.00 E-value=18 Score=33.02 Aligned_cols=30 Identities=47% Similarity=0.535 Sum_probs=27.5
Q ss_pred CCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 226 TFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 226 l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
+.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 5 l~~k~vlITGas~gIG~~~a~~l~~~G~~v 34 (255)
T 3icc_A 5 LKGKVALVTGASRGIGRAIAKRLANDGALV 34 (255)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCEE
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCeE
Confidence 689999999999999999999999999854
No 258
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=33.88 E-value=3.7e+02 Score=26.83 Aligned_cols=128 Identities=13% Similarity=0.072 Sum_probs=80.4
Q ss_pred EEEEEEeCCChhhHHHHHHHHHHHHHcCCeeeeeEEecCCcccHH------hhhccccCCCCCCccEEEEcCCCCCCCcH
Q psy4615 103 TLTAILVGNDSASSTYVNNKMKSAAKVGEVNALGVLYHLTLFGRS------KLINPMSIPISTGVSSHISQLPLPEHMVE 176 (477)
Q Consensus 103 ~LaiI~vGdd~aS~~Yv~~k~k~a~~vGI~~~~~~~lp~~~~t~e------~~I~~L~~N~D~~V~GILVqlPLP~~ld~ 176 (477)
.++.|..- .|..---+=..++.++|.++. .+. +.++ +-. +.++-| +.= +|+|++--| .+-..
T Consensus 60 ~la~lF~e---pSTRTR~SFE~A~~~LGg~~i-~l~-~~~s-s~~kgEsl~DTarvL--s~~--~D~iviR~~--~~~~~ 127 (325)
T 1vlv_A 60 TLAMIFEK---RSTRTRLAFETAFAEEGGHPI-FLS-PNDI-HLGAKESLEDTARVL--GRM--VDAIMFRGY--KQETV 127 (325)
T ss_dssp EEEEEESS---CCHHHHHHHHHHHHHTTCEEE-EEC-TTTC-CTTTSSCHHHHHHHH--HTT--CSEEEEESS--CHHHH
T ss_pred EEEEEecc---CCcchHHHHHHHHHHcCCeEE-EEC-Cccc-cCCCCcCHHHHHHHH--HHh--CCEEEEECC--ChHHH
Confidence 35555542 233333345789999999877 554 2222 111 455544 333 689999865 33333
Q ss_pred HHHHhhcCCCCCCCCCCccchHHhhcCCCCcccCCHHH-HHHHHHHhCCCCCCCeEEEECCC-CCcchHHHHHhhhCCCC
Q psy4615 177 RAVCNAVAPHKDVDGFNIVNVGRFCLDLKTLIPCTPLG-VQELIRRYKVETFGKNAVVCGRS-KNVGMPIAMLLHADGAG 254 (477)
Q Consensus 177 ~~l~~aI~p~KDVDGl~p~nlg~l~~g~~~f~PcTa~A-v~~Lle~~gi~l~Gk~vvViGrS-~~VGkPLA~lL~~~~a~ 254 (477)
+.+.+.. +.+-+|. |.....||=+.| ++.+.|+.| +++|.+++++|-. +-|..-+...+..-|++
T Consensus 128 ~~lA~~~-------~vPVINa-----~~~~~HPtQaLaDl~Ti~e~~g-~l~gl~va~vGD~~~rva~Sl~~~~~~~G~~ 194 (325)
T 1vlv_A 128 EKLAEYS-------GVPVYNG-----LTDEFHPTQALADLMTIEENFG-RLKGVKVVFMGDTRNNVATSLMIACAKMGMN 194 (325)
T ss_dssp HHHHHHH-------CSCEEES-----CCSSCCHHHHHHHHHHHHHHHS-CSTTCEEEEESCTTSHHHHHHHHHHHHTTCE
T ss_pred HHHHHhC-------CCCEEeC-----CCCCCCcHHHHHHHHHHHHHhC-CcCCcEEEEECCCCcCcHHHHHHHHHHCCCE
Confidence 3443332 2455663 345788998886 677777777 7999999999975 56777777777777775
Q ss_pred c
Q psy4615 255 V 255 (477)
Q Consensus 255 v 255 (477)
+
T Consensus 195 v 195 (325)
T 1vlv_A 195 F 195 (325)
T ss_dssp E
T ss_pred E
Confidence 4
No 259
>1dbq_A Purine repressor; transcription regulation, DNA-binding regulatory protein; 2.20A {Escherichia coli} SCOP: c.93.1.1 PDB: 1jhz_A
Probab=33.80 E-value=60 Score=29.63 Aligned_cols=64 Identities=8% Similarity=0.000 Sum_probs=40.7
Q ss_pred CCCEEEEEEeC-CChhhHHHHHHHHHHHHHcCCeeeeeEEecCCcccHH-hhhccccCCCCCCccEEEEcC
Q psy4615 100 RVPTLTAILVG-NDSASSTYVNNKMKSAAKVGEVNALGVLYHLTLFGRS-KLINPMSIPISTGVSSHISQL 168 (477)
Q Consensus 100 ~~P~LaiI~vG-dd~aS~~Yv~~k~k~a~~vGI~~~~~~~lp~~~~t~e-~~I~~L~~N~D~~V~GILVql 168 (477)
+..++++|.-. +++-...+.+...+.|++.|.+.. ...-..+. .++ +.++.+ . ...|+|||+.-
T Consensus 6 ~~~~Ig~i~~~~~~~~~~~~~~gi~~~~~~~g~~~~-~~~~~~~~-~~~~~~~~~l--~-~~~vdgii~~~ 71 (289)
T 1dbq_A 6 HTKSIGLLATSSEAAYFAEIIEAVEKNCFQKGYTLI-LGNAWNNL-EKQRAYLSMM--A-QKRVDGLLVMC 71 (289)
T ss_dssp --CEEEEEESCTTSHHHHHHHHHHHHHHHHHTCEEE-EEECTTCH-HHHHHHHHHH--H-HTTCSEEEEEC
T ss_pred CCCEEEEEeCCCCChHHHHHHHHHHHHHHHcCCeEE-EEcCCCCh-HHHHHHHHHH--H-hCCCCEEEEEe
Confidence 45577777643 344455567888899999999887 55433333 222 566766 3 34699999964
No 260
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=33.69 E-value=41 Score=32.16 Aligned_cols=47 Identities=15% Similarity=0.133 Sum_probs=31.9
Q ss_pred CCCCCeEEEEecCCCCCC----cccccceeccCCCCccHhHHHHHHHHHHHHHHHHHH
Q psy4615 1 MVKPGACVIDVGITRIKC----VSEVAGYITPVPGGVGPMTVAMLMKNTILAAKHAVI 54 (477)
Q Consensus 1 ~vk~gavVIDvGin~~~~----~~~~~~~iTPVPGGVGp~T~a~L~~N~v~aa~~~~~ 54 (477)
++++|++|+|+..|.... ....+++ + +.+| ..||+.|.+.+.+.|..
T Consensus 219 ~l~~~~~v~Dv~y~p~~t~ll~~a~~~G~-~-~~~G-----l~mL~~Qa~~af~~w~g 269 (287)
T 1nvt_A 219 KLREDMVVMDLIYNPLETVLLKEAKKVNA-K-TING-----LGMLIYQGAVAFKIWTG 269 (287)
T ss_dssp TCCSSSEEEECCCSSSSCHHHHHHHTTTC-E-EECT-----HHHHHHHHHHHHHHHHS
T ss_pred HcCCCCEEEEeeeCCccCHHHHHHHHCCC-E-EeCc-----HHHHHHHHHHHHHHHhC
Confidence 468899999999886432 1222333 2 3345 36999999999888754
No 261
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=33.63 E-value=20 Score=34.71 Aligned_cols=31 Identities=32% Similarity=0.457 Sum_probs=28.6
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
.+.||.++|+|.+.-+|+-++..|+.+|+.|
T Consensus 43 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V 73 (317)
T 3oec_A 43 RLQGKVAFITGAARGQGRTHAVRLAQDGADI 73 (317)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTCEE
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCeE
Confidence 5789999999999999999999999999854
No 262
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=33.46 E-value=21 Score=32.98 Aligned_cols=31 Identities=19% Similarity=0.330 Sum_probs=26.0
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
+..||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 19 ~~m~k~vlITGas~gIG~~la~~l~~~G~~V 49 (251)
T 3orf_A 19 SHMSKNILVLGGSGALGAEVVKFFKSKSWNT 49 (251)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTCEE
T ss_pred cccCCEEEEECCCCHHHHHHHHHHHHCCCEE
Confidence 4568999999999999999999999999843
No 263
>2dri_A D-ribose-binding protein; sugar transport; HET: RIP; 1.60A {Escherichia coli} SCOP: c.93.1.1 PDB: 1urp_A* 1ba2_A 1dbp_A* 1drj_A* 1drk_A* 2gx6_A*
Probab=33.26 E-value=1.2e+02 Score=27.53 Aligned_cols=61 Identities=11% Similarity=0.089 Sum_probs=38.6
Q ss_pred CEEEEEEeC-CChhhHHHHHHHHHHHHHcCCeeeeeEEecCCcccHH-hhhccccCCCCCCccEEEEc
Q psy4615 102 PTLTAILVG-NDSASSTYVNNKMKSAAKVGEVNALGVLYHLTLFGRS-KLINPMSIPISTGVSSHISQ 167 (477)
Q Consensus 102 P~LaiI~vG-dd~aS~~Yv~~k~k~a~~vGI~~~~~~~lp~~~~t~e-~~I~~L~~N~D~~V~GILVq 167 (477)
+++++|.-. +++--...++...+.|++.|.+.. ...-..+. ..+ +.++.+ - ...||||++.
T Consensus 2 ~~Igvi~~~~~~~f~~~~~~gi~~~~~~~g~~~~-~~~~~~~~-~~~~~~i~~l--~-~~~vdgiIi~ 64 (271)
T 2dri_A 2 DTIALVVSTLNNPFFVSLKDGAQKEADKLGYNLV-VLDSQNNP-AKELANVQDL--T-VRGTKILLIN 64 (271)
T ss_dssp CEEEEEESCSSSHHHHHHHHHHHHHHHHHTCEEE-EEECTTCH-HHHHHHHHHH--T-TTTEEEEEEC
T ss_pred cEEEEEecCCCCHHHHHHHHHHHHHHHHcCcEEE-EeCCCCCH-HHHHHHHHHH--H-HcCCCEEEEe
Confidence 356666543 244444556788899999998887 55433333 222 667776 3 3469999995
No 264
>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}
Probab=33.16 E-value=19 Score=33.78 Aligned_cols=28 Identities=25% Similarity=0.219 Sum_probs=23.9
Q ss_pred CCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 228 GKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 228 Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
||+++|+|.+..+|+-++..|+.++.+|
T Consensus 1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V 28 (322)
T 2p4h_X 1 KGRVCVTGGTGFLGSWIIKSLLENGYSV 28 (322)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEE
T ss_pred CCEEEEECChhHHHHHHHHHHHHCCCEE
Confidence 6889999999999999999998887744
No 265
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=33.15 E-value=25 Score=32.80 Aligned_cols=31 Identities=26% Similarity=0.356 Sum_probs=27.6
Q ss_pred CCCCCeEEEECC--CCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGR--SKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGr--S~~VGkPLA~lL~~~~a~v 255 (477)
.+.||.++|+|. +.-+|+-++..|+.+++.|
T Consensus 4 ~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V 36 (269)
T 2h7i_A 4 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQL 36 (269)
T ss_dssp TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEE
T ss_pred ccCCCEEEEECCCCCCchHHHHHHHHHHCCCEE
Confidence 368999999998 8899999999999999854
No 266
>3lkv_A Uncharacterized conserved domain protein; ATPase binding cassette, PSI, MCSG, structural genomics, Pro structure initiative; HET: PHE; 2.20A {Vibrio cholerae}
Probab=33.07 E-value=1.6e+02 Score=27.88 Aligned_cols=60 Identities=10% Similarity=0.004 Sum_probs=39.8
Q ss_pred CCEEEEEEeCCChhhHHHHHHHHHHHHHcCCeeeeeEEecCCcccHHhhhccccCCCCCCccEEEE
Q psy4615 101 VPTLTAILVGNDSASSTYVNNKMKSAAKVGEVNALGVLYHLTLFGRSKLINPMSIPISTGVSSHIS 166 (477)
Q Consensus 101 ~P~LaiI~vGdd~aS~~Yv~~k~k~a~~vGI~~~~~~~lp~~~~t~e~~I~~L~~N~D~~V~GILV 166 (477)
.-++++|.-.....|...++..++.+++.|+++. .+...... ...+.++.+ . +++++|.+
T Consensus 140 ~k~vgvi~~~~~~~s~~~~~~~~~~~~~~g~~~v-~~~~~~~~-~~~~~~~~l--~--~~~d~i~~ 199 (302)
T 3lkv_A 140 VKSIGVVYNPGEANAVSLMELLKLSAAKHGIKLV-EATALKSA-DVQSATQAI--A--EKSDVIYA 199 (302)
T ss_dssp CCEEEEEECTTCHHHHHHHHHHHHHHHHTTCEEE-EEECSSGG-GHHHHHHHH--H--TTCSEEEE
T ss_pred CCEEEEEeCCCcccHHHHHHHHHHHHHHcCCEEE-EEecCChH-HHHHHHHhc--c--CCeeEEEE
Confidence 3467777655556677888888999999999887 66544333 222555555 2 34677665
No 267
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=33.02 E-value=28 Score=33.24 Aligned_cols=31 Identities=26% Similarity=0.340 Sum_probs=27.7
Q ss_pred CCCCCeEEEECCCCC--cchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKN--VGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~--VGkPLA~lL~~~~a~v 255 (477)
.+.||.++|+|.+.- +|+-++..|+.+++.|
T Consensus 28 ~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V 60 (293)
T 3grk_A 28 LLQGKRGLILGVANNRSIAWGIAKAAREAGAEL 60 (293)
T ss_dssp TTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEE
T ss_pred cCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEE
Confidence 578999999999866 9999999999999854
No 268
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=33.01 E-value=3.7e+02 Score=26.62 Aligned_cols=161 Identities=11% Similarity=0.019 Sum_probs=92.4
Q ss_pred ccccHHHHHHHHHHHHHHHHHHHHcCC---CC-CEEEEEEeCCChhhHHHHHHHHHHHHHcCCeeeeeEEecCC---ccc
Q psy4615 73 IIDGKFIANTILEELKDEVKAWVALGH---RV-PTLTAILVGNDSASSTYVNNKMKSAAKVGEVNALGVLYHLT---LFG 145 (477)
Q Consensus 73 ILdGk~lA~~I~~~lk~~v~~lk~~~g---~~-P~LaiI~vGdd~aS~~Yv~~k~k~a~~vGI~~~~~~~lp~~---~~t 145 (477)
+|+-..+..+=.+.|-+...++|+... .+ ..++.|...+ |..---+=..++.++|.++. .+.-... ...
T Consensus 9 ~ls~~dls~~ei~~ll~~A~~lk~~~~~~~L~gk~la~lF~e~---STRTR~SFe~A~~~LGg~~i-~l~~~~~~S~~~k 84 (310)
T 3csu_A 9 IISINDLSRDDLNLVLATAAKLKANPQPELLKHKVIASCFFEA---STRTRLSFETSMHRLGASVV-GFSDSANTSLGKK 84 (310)
T ss_dssp BCCGGGCCHHHHHHHHHHHHHHHHSCCTTTTTTCEEEEEESSC---CHHHHHHHHHHHHTTTCEEE-EESCC-----CCS
T ss_pred ccchhhCCHHHHHHHHHHHHHHHhcccccccCCCEEEEEecCC---CccHHHHHHHHHHHhCCeEE-EeCCCccchhhcc
Confidence 344444433333444455555554211 11 2455555532 33333455789999999877 5532322 100
Q ss_pred HH---hhhccccCCCCCCccEEEEcCCCCCCCcHHHHHhhcCCCCCCCCCCccchHHhhcCC-CCcccCCHHH-HHHHHH
Q psy4615 146 RS---KLINPMSIPISTGVSSHISQLPLPEHMVERAVCNAVAPHKDVDGFNIVNVGRFCLDL-KTLIPCTPLG-VQELIR 220 (477)
Q Consensus 146 ~e---~~I~~L~~N~D~~V~GILVqlPLP~~ld~~~l~~aI~p~KDVDGl~p~nlg~l~~g~-~~f~PcTa~A-v~~Lle 220 (477)
-| +.++-| +.= +|+|++-.| .|-..+.+.+.. + +.+-+|. |. ..+.||-+.| ++.+.|
T Consensus 85 gEsl~DTarvl--s~~--~D~iviR~~--~~~~~~~la~~~-~-----~vPVINa-----g~G~~~HPtQaLaDl~Ti~e 147 (310)
T 3csu_A 85 GETLADTISVI--STY--VDAIVMRHP--QEGAARLATEFS-G-----NVPVLNA-----GDGSNQHPTQTLLDLFTIQE 147 (310)
T ss_dssp HHHHHHHHHHH--TTT--CSEEEEEES--STTHHHHHHHHC-T-----TCCEEEE-----EETTSCCHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHH--HHh--CCEEEEECC--ChhHHHHHHHhc-C-----CCCEEcC-----ccCCCCCchHHHHHHHHHHH
Confidence 11 455555 333 689999866 444444554433 1 2445563 33 4689998887 677777
Q ss_pred HhCCCCCCCeEEEECCC--CCcchHHHHHhhhC-CCCc
Q psy4615 221 RYKVETFGKNAVVCGRS--KNVGMPIAMLLHAD-GAGV 255 (477)
Q Consensus 221 ~~gi~l~Gk~vvViGrS--~~VGkPLA~lL~~~-~a~v 255 (477)
+.| .++|++++++|-. .-|..-+...+..- |+++
T Consensus 148 ~~g-~l~gl~va~vGD~~~~rva~Sl~~~~~~~~g~~v 184 (310)
T 3csu_A 148 TQG-RLDNLHVAMVGDLKYGRTVHSLTQALAKFDGNRF 184 (310)
T ss_dssp HHS-CSSSCEEEEESCTTTCHHHHHHHHHHHTSSSCEE
T ss_pred HhC-CcCCcEEEEECCCCCCchHHHHHHHHHhCCCCEE
Confidence 777 7999999999974 35667777777666 7654
No 269
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=33.00 E-value=19 Score=33.59 Aligned_cols=31 Identities=35% Similarity=0.573 Sum_probs=27.1
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
++.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 23 ~l~~k~vlVTGas~gIG~~la~~l~~~G~~v 53 (267)
T 4iiu_A 23 NAMSRSVLVTGASKGIGRAIARQLAADGFNI 53 (267)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHHTTCEE
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCEE
Confidence 4689999999999999999999999999854
No 270
>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}
Probab=32.66 E-value=16 Score=33.10 Aligned_cols=31 Identities=23% Similarity=0.224 Sum_probs=26.6
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
++.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 3 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V 33 (223)
T 3uce_A 3 GSDKTVYVVLGGTSGIGAELAKQLESEHTIV 33 (223)
T ss_dssp --CCEEEEEETTTSHHHHHHHHHHCSTTEEE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEE
Confidence 3679999999999999999999999988743
No 271
>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*
Probab=32.62 E-value=28 Score=33.36 Aligned_cols=32 Identities=38% Similarity=0.495 Sum_probs=28.3
Q ss_pred CCCCCCeEEEECC--CCCcchHHHHHhhhCCCCc
Q psy4615 224 VETFGKNAVVCGR--SKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 224 i~l~Gk~vvViGr--S~~VGkPLA~lL~~~~a~v 255 (477)
.++.||.++|+|. +.-+|+-++..|+.+++.|
T Consensus 5 ~~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~V 38 (315)
T 2o2s_A 5 IDLRGQTAFVAGVADSHGYGWAIAKHLASAGARV 38 (315)
T ss_dssp CCCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEE
T ss_pred ccCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEE
Confidence 3578999999998 7889999999999999854
No 272
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=32.62 E-value=22 Score=33.14 Aligned_cols=28 Identities=25% Similarity=0.350 Sum_probs=24.2
Q ss_pred CCCCeEEEECCCCCcchHHHHHhhhCCC
Q psy4615 226 TFGKNAVVCGRSKNVGMPIAMLLHADGA 253 (477)
Q Consensus 226 l~Gk~vvViGrS~~VGkPLA~lL~~~~a 253 (477)
+.+++++|+|.+..+|+.++..|..++.
T Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~ 32 (321)
T 3vps_A 5 TLKHRILITGGAGFIGGHLARALVASGE 32 (321)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTC
T ss_pred cCCCeEEEECCCChHHHHHHHHHHHCCC
Confidence 4689999999999999999999988876
No 273
>1byk_A Protein (trehalose operon repressor); LACI family, phosphate binding, protein structure, trehalose repressor, gene regulation; HET: T6P; 2.50A {Escherichia coli} SCOP: c.93.1.1
Probab=32.59 E-value=1.3e+02 Score=26.81 Aligned_cols=62 Identities=5% Similarity=-0.016 Sum_probs=39.8
Q ss_pred CEEEEEEeC-CChhhHHHHHHHHHHHHHcCCeeeeeEEecCCcccHH-hhhccccCCCCCCccEEEEcC
Q psy4615 102 PTLTAILVG-NDSASSTYVNNKMKSAAKVGEVNALGVLYHLTLFGRS-KLINPMSIPISTGVSSHISQL 168 (477)
Q Consensus 102 P~LaiI~vG-dd~aS~~Yv~~k~k~a~~vGI~~~~~~~lp~~~~t~e-~~I~~L~~N~D~~V~GILVql 168 (477)
.++++|.-. +++--...++...+.|++.|.... ......+. ..+ +.++.+ . ...|+|||+.-
T Consensus 3 ~~Igvi~~~~~~~~~~~~~~gi~~~~~~~g~~~~-~~~~~~~~-~~~~~~~~~l--~-~~~vdgiI~~~ 66 (255)
T 1byk_A 3 KVVAIIVTRLDSLSENLAVQTMLPAFYEQGYDPI-MMESQFSP-QLVAEHLGVL--K-RRNIDGVVLFG 66 (255)
T ss_dssp CEEEEEESCTTCHHHHHHHHHHHHHHHHHTCEEE-EEECTTCH-HHHHHHHHHH--H-TTTCCEEEEEC
T ss_pred CEEEEEeCCCCCccHHHHHHHHHHHHHHcCCEEE-EEeCCCcH-HHHHHHHHHH--H-hcCCCEEEEec
Confidence 356666543 244445567788899999999887 65543333 222 566666 3 34699999974
No 274
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=32.30 E-value=22 Score=33.60 Aligned_cols=30 Identities=23% Similarity=0.198 Sum_probs=25.7
Q ss_pred CCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 226 TFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 226 l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
+.||+++|+|.+..+|+-++..|+.++..|
T Consensus 9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V 38 (342)
T 1y1p_A 9 PEGSLVLVTGANGFVASHVVEQLLEHGYKV 38 (342)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEE
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCCEE
Confidence 578999999999999999999998887643
No 275
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=32.17 E-value=17 Score=34.37 Aligned_cols=31 Identities=39% Similarity=0.491 Sum_probs=27.1
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
++.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 20 ~l~~k~~lVTGas~gIG~aia~~L~~~G~~V 50 (288)
T 2x9g_A 20 HMEAPAAVVTGAAKRIGRAIAVKLHQTGYRV 50 (288)
T ss_dssp --CCCEEEETTCSSHHHHHHHHHHHHHTCEE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeE
Confidence 4789999999999999999999999999854
No 276
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=32.07 E-value=18 Score=32.59 Aligned_cols=28 Identities=18% Similarity=0.226 Sum_probs=26.0
Q ss_pred CCCCeEEEECCCCCcchHHHHHhhhCCC
Q psy4615 226 TFGKNAVVCGRSKNVGMPIAMLLHADGA 253 (477)
Q Consensus 226 l~Gk~vvViGrS~~VGkPLA~lL~~~~a 253 (477)
+.||+++|+|.+..+|+.++..|+.+++
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~G~ 43 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQGL 43 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHTC
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcCCC
Confidence 5689999999999999999999999887
No 277
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=31.99 E-value=18 Score=33.02 Aligned_cols=29 Identities=21% Similarity=0.334 Sum_probs=26.3
Q ss_pred CCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 227 FGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 227 ~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 2 ~~k~vlITGas~gIG~~~a~~l~~~G~~V 30 (236)
T 1ooe_A 2 SSGKVIVYGGKGALGSAILEFFKKNGYTV 30 (236)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTTEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEE
Confidence 68999999999999999999999998743
No 278
>3r7f_A Aspartate carbamoyltransferase; aspartate transcarbamoylase, carbamoyl phosphate, transferas catalytic cycle; 2.10A {Bacillus subtilis} PDB: 3r7d_A 3r7l_A* 2at2_A
Probab=31.85 E-value=3.9e+02 Score=26.41 Aligned_cols=116 Identities=18% Similarity=0.123 Sum_probs=72.2
Q ss_pred HHHHHHHHcCCeeeeeEEecCCc-----ccHHhhhccccCCCCCCccEEEEcCCCCCCCcHHHHHhhcCCCCCCCCCCcc
Q psy4615 121 NKMKSAAKVGEVNALGVLYHLTL-----FGRSKLINPMSIPISTGVSSHISQLPLPEHMVERAVCNAVAPHKDVDGFNIV 195 (477)
Q Consensus 121 ~k~k~a~~vGI~~~~~~~lp~~~-----~t~e~~I~~L~~N~D~~V~GILVqlPLP~~ld~~~l~~aI~p~KDVDGl~p~ 195 (477)
+=..++.++|..+. .+. +.++ |+-++.++-| +.= .+|+|++--|- |-..+.+.+.. +++-+
T Consensus 53 SFE~A~~~LGg~~i-~l~-~~~ss~~kgEsl~DTarvL--s~~-~~D~iviR~~~--~~~~~~la~~~-------~vPVI 118 (304)
T 3r7f_A 53 SFEVAEKKLGMNVL-NLD-GTSTSVQKGETLYDTIRTL--ESI-GVDVCVIRHSE--DEYYEELVSQV-------NIPIL 118 (304)
T ss_dssp HHHHHHHHTTCEEE-EEE-TTSTTSCSSSCHHHHHHHH--HHH-TCCEEEEECSS--TTCHHHHHHHC-------SSCEE
T ss_pred hHHHHHHHCCCeEE-EEC-cccccCCCCCCHHHHHHHH--HHh-cCCEEEEecCC--hhHHHHHHHhC-------CCCEE
Confidence 44788999999887 553 2222 0111333333 110 36899998663 44444554432 24455
Q ss_pred chHHhhcCCCCcccCCHHH-HHHHHHHhCCCCCCCeEEEECCCC--CcchHHHHHhhhCCCCc
Q psy4615 196 NVGRFCLDLKTLIPCTPLG-VQELIRRYKVETFGKNAVVCGRSK--NVGMPIAMLLHADGAGV 255 (477)
Q Consensus 196 nlg~l~~g~~~f~PcTa~A-v~~Lle~~gi~l~Gk~vvViGrS~--~VGkPLA~lL~~~~a~v 255 (477)
|.| ....+.||-+.| ++.+.|+.| .++|.+++++|-.. -|-.-+...+..-|.++
T Consensus 119 Nag----dg~~~HPtQaLaDl~Ti~e~~g-~l~glkva~vGD~~~~rva~Sl~~~~~~~G~~v 176 (304)
T 3r7f_A 119 NAG----DGCGQHPTQSLLDLMTIYEEFN-TFKGLTVSIHGDIKHSRVARSNAEVLTRLGARV 176 (304)
T ss_dssp ESC----CTTSCCHHHHHHHHHHHHHHHS-CCTTCEEEEESCCTTCHHHHHHHHHHHHTTCEE
T ss_pred eCC----CCCCcCcHHHHHHHHHHHHHhC-CCCCCEEEEEcCCCCcchHHHHHHHHHHcCCEE
Confidence 532 124688998887 678888887 79999999999753 36666777776666643
No 279
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=31.61 E-value=21 Score=33.62 Aligned_cols=30 Identities=40% Similarity=0.509 Sum_probs=27.5
Q ss_pred CCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 226 TFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 226 l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
+.||.++|+|.+.-+|+-++..|+.+|+.|
T Consensus 26 ~~~k~vlITGasggIG~~la~~l~~~G~~V 55 (286)
T 1xu9_A 26 LQGKKVIVTGASKGIGREMAYHLAKMGAHV 55 (286)
T ss_dssp GTTCEEEESSCSSHHHHHHHHHHHHTTCEE
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEE
Confidence 679999999999999999999999998754
No 280
>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1
Probab=31.24 E-value=2.9e+02 Score=27.27 Aligned_cols=128 Identities=11% Similarity=0.101 Sum_probs=79.0
Q ss_pred EEEEEEeCCChhhHHHHHHHHHHHHHcCCeeeeeEEecCCcccH-H------hhhccccCCCCCCccEEEEcCCCCCCCc
Q psy4615 103 TLTAILVGNDSASSTYVNNKMKSAAKVGEVNALGVLYHLTLFGR-S------KLINPMSIPISTGVSSHISQLPLPEHMV 175 (477)
Q Consensus 103 ~LaiI~vGdd~aS~~Yv~~k~k~a~~vGI~~~~~~~lp~~~~t~-e------~~I~~L~~N~D~~V~GILVqlPLP~~ld 175 (477)
.++.|..- | |..---+=..++.++|.++. .+. +.++ ++ . +.++-| +.= +|+|++-.| .|-.
T Consensus 46 ~l~~lF~e--~-STRTR~SFe~A~~~LGg~~i-~l~-~~~~-s~~~kgEsl~DTarvl--s~~--~D~iviR~~--~~~~ 113 (308)
T 1ml4_A 46 ILATLFFE--P-STRTRLSFESAMHRLGGAVI-GFA-EAST-SSVKKGESLRDTIKTV--EQY--CDVIVIRHP--KEGA 113 (308)
T ss_dssp EEEEEESS--C-CSHHHHHHHHHHHHTTCEEE-EES-CGGG-SGGGGTCCHHHHHHHH--TTT--CSEEEEEES--STTH
T ss_pred EEEEEecC--C-CchHHHHHHHHHHHhCCeEE-EeC-CCcc-ccccCCCCHHHHHHHH--HHh--CcEEEEecC--ChhH
Confidence 45555543 2 33223345789999999877 443 2221 12 1 555555 333 689999865 4444
Q ss_pred HHHHHhhcCCCCCCCCCCccchHHhhcCC-CCcccCCHHH-HHHHHHHhCCCCCCCeEEEECCC--CCcchHHHHHhhhC
Q psy4615 176 ERAVCNAVAPHKDVDGFNIVNVGRFCLDL-KTLIPCTPLG-VQELIRRYKVETFGKNAVVCGRS--KNVGMPIAMLLHAD 251 (477)
Q Consensus 176 ~~~l~~aI~p~KDVDGl~p~nlg~l~~g~-~~f~PcTa~A-v~~Lle~~gi~l~Gk~vvViGrS--~~VGkPLA~lL~~~ 251 (477)
.+.+.+.. ..+-+|. |. ....||-+.| ++.+.|+.| +++|++++++|-. .-|..-+...+..-
T Consensus 114 ~~~la~~~-------~vPVINa-----g~g~~~HPtQ~LaDl~Ti~e~~g-~l~gl~va~vGD~~~~rva~Sl~~~~~~~ 180 (308)
T 1ml4_A 114 ARLAAEVA-------EVPVINA-----GDGSNQHPTQTLLDLYTIKKEFG-RIDGLKIGLLGDLKYGRTVHSLAEALTFY 180 (308)
T ss_dssp HHHHHHTC-------SSCEEEE-----EETTSCCHHHHHHHHHHHHHHSS-CSSSEEEEEESCTTTCHHHHHHHHHGGGS
T ss_pred HHHHHHhC-------CCCEEeC-----ccCCccCcHHHHHHHHHHHHHhC-CCCCeEEEEeCCCCcCchHHHHHHHHHHC
Confidence 44444332 2455663 33 4689998887 677777776 7999999999974 24667777777666
Q ss_pred CCCc
Q psy4615 252 GAGV 255 (477)
Q Consensus 252 ~a~v 255 (477)
|+++
T Consensus 181 G~~v 184 (308)
T 1ml4_A 181 DVEL 184 (308)
T ss_dssp CEEE
T ss_pred CCEE
Confidence 6643
No 281
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=31.24 E-value=67 Score=29.73 Aligned_cols=92 Identities=10% Similarity=-0.066 Sum_probs=43.9
Q ss_pred HHHhhhhcccCCC-ccccccccchHHHHHhhhcCCCCCCCCchhchHHHH-HHHHHHHHHHhcCCCCCCccccceecccc
Q psy4615 373 AELSSRIQFTSPT-VAEYTYFHPVLSILSYLCKAPLVPPGTPVVNALAQQ-RSCIENILRACLSLPPENSMTLEHKLPRR 450 (477)
Q Consensus 373 ~~~~~r~~~~~~~-~~~~~~~~~vl~~Ls~~fK~P~~~~g~~~~~~l~~Q-~~~l~~~~~~~~g~~~~~~~~~~~~~~~~ 450 (477)
.+.+++.|.+-++ +-..-.|...-..++.+...|.. +++..+...+ +.+.+..++.+.|.....++....++..+
T Consensus 204 ~~al~~~g~~vP~~dv~vig~D~~~~~~~~i~~~~~l---ttv~~~~~~~g~~av~~l~~~i~g~~~~~~i~~~~~~~~~ 280 (297)
T 3rot_A 204 GQMLLHPDRYDFNYQPQVYSFDKTPNTVSLIHKKLVN---YVMDQQPFLMGYLSITQLVLMNRYQLNPVNINTAMAENLY 280 (297)
T ss_dssp HHHHHSHHHHTCCCCCEEEEECCCHHHHHHHHTTSCC---EEECCCHHHHHHHHHHHHHHHHHHCCCCCCEECCC-----
T ss_pred HHHHHhcCCccCCCceEEEEeCCCHHHHHHHHcCCce---EEEecChHHHHHHHHHHHHHHHhCCCCCcccccCceEEec
Confidence 4455666765333 44455666666666776665531 5566666665 45666667777777777788888888888
Q ss_pred cCCCCCcccccCCCcCc
Q psy4615 451 LFQDKSKSIDSHPQGDK 467 (477)
Q Consensus 451 ~~~~~~~~~~~~~~~~~ 467 (477)
...+-.---+||||=.|
T Consensus 281 ~~~~~~~~~~~~~~~~~ 297 (297)
T 3rot_A 281 FQSHHHHHHWSHPQFEK 297 (297)
T ss_dssp -----------------
T ss_pred chhccccccCCCccccC
Confidence 88888888888888543
No 282
>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}
Probab=31.18 E-value=21 Score=34.07 Aligned_cols=30 Identities=23% Similarity=0.306 Sum_probs=26.5
Q ss_pred CCCCCCCeEEEECCCCCcchHHHHHhhhCC
Q psy4615 223 KVETFGKNAVVCGRSKNVGMPIAMLLHADG 252 (477)
Q Consensus 223 gi~l~Gk~vvViGrS~~VGkPLA~lL~~~~ 252 (477)
++.+.|++++|+|.+..+|+-++..|+.++
T Consensus 9 ~~~~~~~~vlVtGa~G~iG~~l~~~L~~~g 38 (342)
T 2hrz_A 9 NLYFQGMHIAIIGAAGMVGRKLTQRLVKDG 38 (342)
T ss_dssp CSCCSCEEEEEETTTSHHHHHHHHHHHHHC
T ss_pred CCCccCCEEEEECCCcHHHHHHHHHHHhcC
Confidence 345789999999999999999999998877
No 283
>3kke_A LACI family transcriptional regulator; structural genomics, DNA-binding, transcription regulation, PSI-2; 2.20A {Mycobacterium smegmatis str}
Probab=31.18 E-value=1e+02 Score=28.56 Aligned_cols=64 Identities=11% Similarity=-0.031 Sum_probs=42.3
Q ss_pred CCEEEEEEeC-CChhhHHHHHHHHHHHHHcCCeeeeeEEecCCcccHH-hhhccccCCCCCCccEEEEcCC
Q psy4615 101 VPTLTAILVG-NDSASSTYVNNKMKSAAKVGEVNALGVLYHLTLFGRS-KLINPMSIPISTGVSSHISQLP 169 (477)
Q Consensus 101 ~P~LaiI~vG-dd~aS~~Yv~~k~k~a~~vGI~~~~~~~lp~~~~t~e-~~I~~L~~N~D~~V~GILVqlP 169 (477)
...+++|.-. .++--...++...+.|++.|.... ......+. ..+ +.++.+ . ...|+|||+.-.
T Consensus 15 s~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~-~~~~~~~~-~~~~~~~~~l--~-~~~vdgiI~~~~ 80 (303)
T 3kke_A 15 SGTIGLIVPDVNNAVFADMFSGVQMAASGHSTDVL-LGQIDAPP-RGTQQLSRLV--S-EGRVDGVLLQRR 80 (303)
T ss_dssp --CEEEEESCTTSTTHHHHHHHHHHHHHHTTCCEE-EEECCSTT-HHHHHHHHHH--H-SCSSSEEEECCC
T ss_pred CCEEEEEeCCCcChHHHHHHHHHHHHHHHCCCEEE-EEeCCCCh-HHHHHHHHHH--H-hCCCcEEEEecC
Confidence 4457776643 244456677889999999999988 76655554 223 666666 3 347999999633
No 284
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=31.17 E-value=28 Score=32.74 Aligned_cols=31 Identities=29% Similarity=0.425 Sum_probs=27.1
Q ss_pred CCCCCeEEEECCCCC--cchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKN--VGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~--VGkPLA~lL~~~~a~v 255 (477)
.++||.++|+|.+.. +|+-++..|+.+++.|
T Consensus 23 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V 55 (280)
T 3nrc_A 23 FLAGKKILITGLLSNKSIAYGIAKAMHREGAEL 55 (280)
T ss_dssp TTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEE
T ss_pred ccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEE
Confidence 478999999998855 9999999999999854
No 285
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=31.02 E-value=20 Score=33.38 Aligned_cols=31 Identities=32% Similarity=0.483 Sum_probs=26.2
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
.+.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 8 ~~~~k~~lVTGas~gIG~~ia~~l~~~G~~V 38 (276)
T 1mxh_A 8 ASECPAAVITGGARRIGHSIAVRLHQQGFRV 38 (276)
T ss_dssp ---CCEEEETTCSSHHHHHHHHHHHHTTCEE
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEE
Confidence 3679999999999999999999999999854
No 286
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=30.96 E-value=21 Score=32.85 Aligned_cols=28 Identities=11% Similarity=0.203 Sum_probs=25.2
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCC
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADG 252 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~ 252 (477)
++.||.++|+|.+.-+|+-++..|+.++
T Consensus 18 ~~~~k~vlITGasggIG~~la~~L~~~G 45 (267)
T 1sny_A 18 GSHMNSILITGCNRGLGLGLVKALLNLP 45 (267)
T ss_dssp --CCSEEEESCCSSHHHHHHHHHHHTSS
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHHhcC
Confidence 5789999999999999999999999998
No 287
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=30.94 E-value=23 Score=33.10 Aligned_cols=31 Identities=19% Similarity=0.244 Sum_probs=27.9
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
.+.||.++|+|.+.-+|+-++..|+.+|+.|
T Consensus 25 ~~~~k~vlVTGas~gIG~aia~~l~~~G~~V 55 (260)
T 3un1_A 25 RNQQKVVVITGASQGIGAGLVRAYRDRNYRV 55 (260)
T ss_dssp HTTCCEEEESSCSSHHHHHHHHHHHHTTCEE
T ss_pred CcCCCEEEEeCCCCHHHHHHHHHHHHCCCEE
Confidence 3689999999999999999999999999844
No 288
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=30.83 E-value=26 Score=30.37 Aligned_cols=29 Identities=17% Similarity=0.184 Sum_probs=25.3
Q ss_pred CCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 227 FGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 227 ~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
.+++++|+|.+..+|+.++..|..++.+|
T Consensus 2 ~~~~ilVtGatG~iG~~l~~~l~~~g~~V 30 (206)
T 1hdo_A 2 AVKKIAIFGATGQTGLTTLAQAVQAGYEV 30 (206)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTCEE
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeE
Confidence 35889999999999999999999988743
No 289
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=30.80 E-value=26 Score=34.67 Aligned_cols=32 Identities=28% Similarity=0.443 Sum_probs=28.9
Q ss_pred CCCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 224 VETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 224 i~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
-.++||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 41 ~~l~gk~vlVTGas~GIG~aia~~La~~Ga~V 72 (346)
T 3kvo_A 41 GRLAGCTVFITGASRGIGKAIALKAAKDGANI 72 (346)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHHTTTCEE
T ss_pred CCCCCCEEEEeCCChHHHHHHHHHHHHCCCEE
Confidence 36899999999999999999999999999844
No 290
>3hcw_A Maltose operon transcriptional repressor; RNA-binding, PSI-2, NYSGXRC, STRU genomics, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=30.73 E-value=57 Score=30.25 Aligned_cols=64 Identities=8% Similarity=-0.006 Sum_probs=41.4
Q ss_pred CCCCEEEEEEeC------CChhhHHHHHHHHHHHHHcCCeeeeeEEecCCcccHH-hhhccccCCCCCCccEEEEc
Q psy4615 99 HRVPTLTAILVG------NDSASSTYVNNKMKSAAKVGEVNALGVLYHLTLFGRS-KLINPMSIPISTGVSSHISQ 167 (477)
Q Consensus 99 g~~P~LaiI~vG------dd~aS~~Yv~~k~k~a~~vGI~~~~~~~lp~~~~t~e-~~I~~L~~N~D~~V~GILVq 167 (477)
++...+++|.-. .++--...++...+.|++.|.... ......+. ..+ +.++.+ . ..+|+|||+.
T Consensus 5 ~~s~~Igvi~~~~~~~~~~~~f~~~~~~gi~~~a~~~g~~~~-~~~~~~~~-~~~~~~~~~l--~-~~~vdGiI~~ 75 (295)
T 3hcw_A 5 NQTYKIGLVLKGSEEPIRLNPFYINVLLGISETCNQHGYGTQ-TTVSNNMN-DLMDEVYKMI--K-QRMVDAFILL 75 (295)
T ss_dssp CCSCEEEEECSCCCHHHHSCHHHHHHHHHHHHHHHTTTCEEE-ECCCCSHH-HHHHHHHHHH--H-TTCCSEEEES
T ss_pred CCCcEEEEEeecCCcccccChHHHHHHHHHHHHHHHCCCEEE-EEcCCCCh-HHHHHHHHHH--H-hCCcCEEEEc
Confidence 456678877632 344445567888999999999887 55433333 222 556655 2 3479999996
No 291
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=30.72 E-value=26 Score=32.22 Aligned_cols=29 Identities=21% Similarity=0.271 Sum_probs=26.1
Q ss_pred CCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 227 FGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 227 ~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
.||.++|+|.+.-+|+-++..|+.+|+.|
T Consensus 2 s~k~vlVTGas~GIG~a~a~~l~~~G~~V 30 (235)
T 3l6e_A 2 SLGHIIVTGAGSGLGRALTIGLVERGHQV 30 (235)
T ss_dssp -CCEEEEESTTSHHHHHHHHHHHHTTCEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEE
Confidence 58999999999999999999999999854
No 292
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=30.63 E-value=23 Score=33.75 Aligned_cols=31 Identities=26% Similarity=0.299 Sum_probs=27.5
Q ss_pred CCCCCeEEEECC----------------CCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGR----------------SKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGr----------------S~~VGkPLA~lL~~~~a~v 255 (477)
++.||.++|+|. |.-.|.-+|..|+.+|+.|
T Consensus 5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V 51 (226)
T 1u7z_A 5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANV 51 (226)
T ss_dssp TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEE
T ss_pred CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEE
Confidence 478999999998 5778999999999999965
No 293
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=30.55 E-value=23 Score=33.42 Aligned_cols=30 Identities=30% Similarity=0.392 Sum_probs=27.3
Q ss_pred CCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 226 TFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 226 l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
+.||.++|+|.+.-+|+-++..|+.+|+.|
T Consensus 2 l~~k~~lVTGas~GIG~aia~~la~~G~~V 31 (264)
T 3tfo_A 2 VMDKVILITGASGGIGEGIARELGVAGAKI 31 (264)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEE
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCCEE
Confidence 468999999999999999999999999854
No 294
>3d6n_B Aspartate carbamoyltransferase; reactor, chamber, pores, internal cavity, hydrolase, metal-B pyrimidine biosynthesis, hydrolase-transferase; HET: FLC; 2.30A {Aquifex aeolicus}
Probab=30.52 E-value=3.6e+02 Score=26.48 Aligned_cols=119 Identities=17% Similarity=0.085 Sum_probs=75.0
Q ss_pred HHHHHHHHHHcCCeeeeeEEecCCccc-----HHhhhccccCCCCCCccEEEEcCCCCCCCcHHHHHhhcCCCCCCCCCC
Q psy4615 119 VNNKMKSAAKVGEVNALGVLYHLTLFG-----RSKLINPMSIPISTGVSSHISQLPLPEHMVERAVCNAVAPHKDVDGFN 193 (477)
Q Consensus 119 v~~k~k~a~~vGI~~~~~~~lp~~~~t-----~e~~I~~L~~N~D~~V~GILVqlPLP~~ld~~~l~~aI~p~KDVDGl~ 193 (477)
--+=..++.++|.++. .+.- .++.. -++.++-| +.= .+|+|++-.|-...+.+. +.+.. +.+
T Consensus 49 R~SFe~A~~~LGg~~i-~l~~-~~ss~~kgEsl~DTarvl--s~~-~~D~iviR~~~~~~~~~~-la~~~-------~vP 115 (291)
T 3d6n_B 49 RLSFEKAARELGIETY-LVSG-SESSTVKGESFFDTLKTF--EGL-GFDYVVFRVPFVFFPYKE-IVKSL-------NLR 115 (291)
T ss_dssp HHHHHHHHHHTTCEEE-EEET-TTTSCCTTCCHHHHHHHH--HHT-TCSEEEEEESSCCCSCHH-HHHTC-------SSE
T ss_pred HHHHHHHHHHhCCeEE-EECC-ccCcccCCCcHHHHHHHH--HHh-cCCEEEEEcCChHHHHHH-HHHhC-------CCC
Confidence 3345789999999887 6642 22201 11333333 111 258999988765555431 33332 244
Q ss_pred ccchHHhhcCCCCcccCCHHH-HHHHHHHhCCCCCCCeEEEECC--CCCcchHHHHHhhhCCCCc
Q psy4615 194 IVNVGRFCLDLKTLIPCTPLG-VQELIRRYKVETFGKNAVVCGR--SKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 194 p~nlg~l~~g~~~f~PcTa~A-v~~Lle~~gi~l~Gk~vvViGr--S~~VGkPLA~lL~~~~a~v 255 (477)
-+|.| ......||-+.+ ++.+.|+.| +++|.+++++|- .+-|..-+...+..-|+++
T Consensus 116 VINAG----~g~~~HPtQaLaDl~Ti~e~~g-~l~gl~va~vGDl~~~rva~Sl~~~~~~~g~~v 175 (291)
T 3d6n_B 116 LVNAG----DGTHQHPSQGLIDFFTIKEHFG-EVKDLRVLYVGDIKHSRVFRSGAPLLNMFGAKI 175 (291)
T ss_dssp EEEEE----ETTTBCHHHHHHHHHHHHHHHS-CCTTCEEEEESCCTTCHHHHHHHHHHHHTTCEE
T ss_pred EEeCc----cCCCcCcHHHHHHHHHHHHHhC-CcCCcEEEEECCCCCCchHHHHHHHHHHCCCEE
Confidence 45532 134688998886 677777777 799999999997 6777777887777777754
No 295
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=30.50 E-value=28 Score=31.48 Aligned_cols=29 Identities=38% Similarity=0.447 Sum_probs=26.4
Q ss_pred CCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 227 FGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 227 ~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
+||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V 29 (235)
T 3l77_A 1 EMKVAVITGASRGIGEAIARALARDGYAL 29 (235)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTCEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEE
Confidence 47999999999999999999999999854
No 296
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=30.42 E-value=27 Score=33.16 Aligned_cols=31 Identities=29% Similarity=0.425 Sum_probs=27.1
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
++.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 25 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V 55 (283)
T 3v8b_A 25 NQPSPVALITGAGSGIGRATALALAADGVTV 55 (283)
T ss_dssp --CCCEEEEESCSSHHHHHHHHHHHHTTCEE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEE
Confidence 5789999999999999999999999999854
No 297
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=30.40 E-value=22 Score=33.96 Aligned_cols=29 Identities=28% Similarity=0.363 Sum_probs=24.0
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCC
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGA 253 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a 253 (477)
.+.|++++|+|.+..+|+-++..|+.++.
T Consensus 18 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~ 46 (333)
T 2q1w_A 18 GSHMKKVFITGICGQIGSHIAELLLERGD 46 (333)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTC
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHHCCC
Confidence 45789999999999999999999988776
No 298
>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}
Probab=30.02 E-value=33 Score=32.87 Aligned_cols=32 Identities=47% Similarity=0.587 Sum_probs=28.2
Q ss_pred CCCCCCeEEEECC--CCCcchHHHHHhhhCCCCc
Q psy4615 224 VETFGKNAVVCGR--SKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 224 i~l~Gk~vvViGr--S~~VGkPLA~lL~~~~a~v 255 (477)
.++.||.++|+|. +.-+|+-++..|+.+++.|
T Consensus 5 ~~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~V 38 (319)
T 2ptg_A 5 VDLRGKTAFVAGVADSNGYGWAICKLLRAAGARV 38 (319)
T ss_dssp CCCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEE
T ss_pred cccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEE
Confidence 3578999999998 7889999999999999854
No 299
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=29.89 E-value=23 Score=32.53 Aligned_cols=30 Identities=37% Similarity=0.592 Sum_probs=27.4
Q ss_pred CCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 226 TFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 226 l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
+.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V 31 (246)
T 3osu_A 2 KMTKSALVTGASRGIGRSIALQLAEEGYNV 31 (246)
T ss_dssp CCSCEEEETTCSSHHHHHHHHHHHHTTCEE
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEE
Confidence 468999999999999999999999999854
No 300
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=29.86 E-value=28 Score=31.81 Aligned_cols=30 Identities=17% Similarity=0.125 Sum_probs=26.6
Q ss_pred CCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 226 TFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 226 l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
..||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V 34 (241)
T 1dhr_A 5 GEARRVLVYGGRGALGSRCVQAFRARNWWV 34 (241)
T ss_dssp -CCCEEEEETTTSHHHHHHHHHHHTTTCEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhCCCEE
Confidence 468999999999999999999999998843
No 301
>2amj_A Modulator of drug activity B; oxidoreductase, menadione, DT-diaphorase, montreal-kingston structural genomics initiative, BSGI; 1.80A {Escherichia coli} PDB: 2b3d_A*
Probab=29.70 E-value=1.1e+02 Score=27.74 Aligned_cols=72 Identities=11% Similarity=-0.096 Sum_probs=44.2
Q ss_pred CEEEEEEeCCC----hhh--HHHHHHHHHHHHHcCCeeeeeEEecCCcccHH---hhhccccCCCCCCccEEEEcCCCCC
Q psy4615 102 PTLTAILVGND----SAS--STYVNNKMKSAAKVGEVNALGVLYHLTLFGRS---KLINPMSIPISTGVSSHISQLPLPE 172 (477)
Q Consensus 102 P~LaiI~vGdd----~aS--~~Yv~~k~k~a~~vGI~~~~~~~lp~~~~t~e---~~I~~L~~N~D~~V~GILVqlPLP~ 172 (477)
-++.+|....+ +.| ..-++.-.+.+++.|.+++ .++|.++. .-+ +.|.+. |+|+++.|+--
T Consensus 13 ~~iLii~gsP~~~~s~~s~~~~l~~~~~~~~~~~g~~v~-~~dL~~~~-d~~~~~~~l~~A--------D~iV~~~P~y~ 82 (204)
T 2amj_A 13 SNILIINGAKKFAHSNGQLNDTLTEVADGTLRDLGHDVR-IVRADSDY-DVKAEVQNFLWA--------DVVIWQMPGWW 82 (204)
T ss_dssp CEEEEEECCC------CHHHHHHHHHHHHHHHHTTCEEE-EEESSSCC-CHHHHHHHHHHC--------SEEEEEEECBT
T ss_pred cCEEEEEcCCCcccCcCcHHHHHHHHHHHHHHHcCCEEE-EEeCCccc-cHHHHHHHHHhC--------CEEEEECCccc
Confidence 46777777777 323 3345566667777799999 99997644 223 444444 79999999864
Q ss_pred CCcHHHHHhhc
Q psy4615 173 HMVERAVCNAV 183 (477)
Q Consensus 173 ~ld~~~l~~aI 183 (477)
.-=...+...|
T Consensus 83 ~s~pa~LK~~i 93 (204)
T 2amj_A 83 MGAPWTVKKYI 93 (204)
T ss_dssp TBCCHHHHHHH
T ss_pred cCCCHHHHHHH
Confidence 33333333333
No 302
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=29.33 E-value=21 Score=34.26 Aligned_cols=28 Identities=29% Similarity=0.309 Sum_probs=25.0
Q ss_pred CCCCeEEEECCCCCcchHHHHHhhhCCC
Q psy4615 226 TFGKNAVVCGRSKNVGMPIAMLLHADGA 253 (477)
Q Consensus 226 l~Gk~vvViGrS~~VGkPLA~lL~~~~a 253 (477)
+.|++++|+|.+..+|+.++..|..++.
T Consensus 7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~ 34 (357)
T 1rkx_A 7 WQGKRVFVTGHTGFKGGWLSLWLQTMGA 34 (357)
T ss_dssp HTTCEEEEETTTSHHHHHHHHHHHHTTC
T ss_pred hCCCEEEEECCCchHHHHHHHHHHhCCC
Confidence 4689999999999999999999988776
No 303
>3gv0_A Transcriptional regulator, LACI family; transcription regulator, PSI-II, structural genomics structure initiative; 2.35A {Agrobacterium tumefaciens str}
Probab=28.89 E-value=55 Score=30.21 Aligned_cols=63 Identities=6% Similarity=-0.071 Sum_probs=40.5
Q ss_pred CCCEEEEEEeCCC---hhhHHHHHHHHHHHHHcCCeeeeeEEecCCcccHH-hhhccccCCCCCCccEEEEc
Q psy4615 100 RVPTLTAILVGND---SASSTYVNNKMKSAAKVGEVNALGVLYHLTLFGRS-KLINPMSIPISTGVSSHISQ 167 (477)
Q Consensus 100 ~~P~LaiI~vGdd---~aS~~Yv~~k~k~a~~vGI~~~~~~~lp~~~~t~e-~~I~~L~~N~D~~V~GILVq 167 (477)
+...+++|.-..+ +--...++...+.|++.|..+. ......+. .++ +.++.+ ....|+|||+.
T Consensus 7 ~s~~Igvv~~~~~~~~~~~~~~~~gi~~~a~~~g~~~~-~~~~~~~~-~~~~~~~~~l---~~~~vdgiIi~ 73 (288)
T 3gv0_A 7 KTNVIALVLSVDEELMGFTSQMVFGITEVLSTTQYHLV-VTPHIHAK-DSMVPIRYIL---ETGSADGVIIS 73 (288)
T ss_dssp CCCEEEEECBCCCCSSCHHHHHHHHHHHHHTTSSCEEE-ECCBSSGG-GTTHHHHHHH---HHTCCSEEEEE
T ss_pred CCCEEEEEecCCccccHHHHHHHHHHHHHHHHcCCEEE-EecCCcch-hHHHHHHHHH---HcCCccEEEEe
Confidence 4567777776433 5556667888999999999888 55443333 222 333333 23479999996
No 304
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=28.76 E-value=24 Score=33.53 Aligned_cols=31 Identities=39% Similarity=0.431 Sum_probs=27.1
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
++.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 6 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V 36 (291)
T 1e7w_A 6 APTVPVALVTGAAKRLGRSIAEGLHAEGYAV 36 (291)
T ss_dssp --CCCEEEETTCSSHHHHHHHHHHHHTTCEE
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCeE
Confidence 4689999999999999999999999999854
No 305
>2iks_A DNA-binding transcriptional dual regulator; escherichia coli structural genomics, PSI-2, protein structure initiative; 1.85A {Escherichia coli}
Probab=28.54 E-value=1.3e+02 Score=27.63 Aligned_cols=65 Identities=11% Similarity=0.062 Sum_probs=42.5
Q ss_pred CCCEEEEEEeC-CChhhHHHHHHHHHHHHHcCCeeeeeEEecCCcccHH-hhhccccCCCCCCccEEEEcCC
Q psy4615 100 RVPTLTAILVG-NDSASSTYVNNKMKSAAKVGEVNALGVLYHLTLFGRS-KLINPMSIPISTGVSSHISQLP 169 (477)
Q Consensus 100 ~~P~LaiI~vG-dd~aS~~Yv~~k~k~a~~vGI~~~~~~~lp~~~~t~e-~~I~~L~~N~D~~V~GILVqlP 169 (477)
+..++++|.-. .++--...++...+.|++.|.++. ......+. ..+ +.++.+ . ...|+|||+.-.
T Consensus 19 ~~~~Ig~i~~~~~~~~~~~~~~gi~~~~~~~g~~~~-~~~~~~~~-~~~~~~~~~l--~-~~~vdgii~~~~ 85 (293)
T 2iks_A 19 RTRSIGLVIPDLENTSYTRIANYLERQARQRGYQLL-IACSEDQP-DNEMRCIEHL--L-QRQVDAIIVSTS 85 (293)
T ss_dssp CCCEEEEEESCSCSHHHHHHHHHHHHHHHHTTCEEE-EEECTTCH-HHHHHHHHHH--H-HTTCSEEEECCS
T ss_pred CCcEEEEEeCCCcCcHHHHHHHHHHHHHHHCCCEEE-EEcCCCCH-HHHHHHHHHH--H-HcCCCEEEEeCC
Confidence 45678877643 344445567888899999999888 65544333 222 566666 3 346999999643
No 306
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=28.43 E-value=25 Score=32.79 Aligned_cols=31 Identities=35% Similarity=0.443 Sum_probs=26.1
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
.+.||.++|+|.+.-+|+-++..|+.+|+.|
T Consensus 9 ~~~~k~vlITGas~GIG~~~a~~L~~~G~~V 39 (311)
T 3o26_A 9 VTKRRCAVVTGGNKGIGFEICKQLSSNGIMV 39 (311)
T ss_dssp ---CCEEEESSCSSHHHHHHHHHHHHTTCEE
T ss_pred cCCCcEEEEecCCchHHHHHHHHHHHCCCEE
Confidence 3579999999999999999999999999854
No 307
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=28.40 E-value=28 Score=31.28 Aligned_cols=27 Identities=22% Similarity=0.342 Sum_probs=24.9
Q ss_pred CCCCeEEEECCCCCcchHHHHHhhhCC
Q psy4615 226 TFGKNAVVCGRSKNVGMPIAMLLHADG 252 (477)
Q Consensus 226 l~Gk~vvViGrS~~VGkPLA~lL~~~~ 252 (477)
+.||.++|+|.+.-+|+-++..|+.++
T Consensus 1 m~~k~vlItGasggiG~~la~~l~~~g 27 (250)
T 1yo6_A 1 MSPGSVVVTGANRGIGLGLVQQLVKDK 27 (250)
T ss_dssp CCCSEEEESSCSSHHHHHHHHHHHTCT
T ss_pred CCCCEEEEecCCchHHHHHHHHHHhcC
Confidence 358999999999999999999999998
No 308
>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}
Probab=28.19 E-value=32 Score=31.58 Aligned_cols=28 Identities=25% Similarity=0.121 Sum_probs=25.1
Q ss_pred CCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 228 GKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 228 Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V 28 (244)
T 1zmo_A 1 MVIALVTHARHFAGPAAVEALTQDGYTV 28 (244)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTCEE
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEE
Confidence 6899999999999999999999999854
No 309
>3clk_A Transcription regulator; 11017J, PSI-II, NYSGXRC, dimer, structural genomics, protein structure initiative; 2.08A {Lactobacillus plantarum WCFS1}
Probab=28.02 E-value=90 Score=28.66 Aligned_cols=66 Identities=9% Similarity=-0.069 Sum_probs=38.3
Q ss_pred CCCEEEEEEeC-CChhhHHHHHHHHHHHHHcCCeeeeeE-EecCCcccHHhhhccccCCCCCCccEEEEcCC
Q psy4615 100 RVPTLTAILVG-NDSASSTYVNNKMKSAAKVGEVNALGV-LYHLTLFGRSKLINPMSIPISTGVSSHISQLP 169 (477)
Q Consensus 100 ~~P~LaiI~vG-dd~aS~~Yv~~k~k~a~~vGI~~~~~~-~lp~~~~t~e~~I~~L~~N~D~~V~GILVqlP 169 (477)
+..++++|.-+ +++--...++...+.|++.|.++. .. ....+.+.+.+.++.+ . ...|+|||+.-+
T Consensus 7 ~~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~-~~~~~~~~~~~~~~~~~~l--~-~~~vdgiI~~~~ 74 (290)
T 3clk_A 7 SSNVIAAVVSSVRTNFAQQILDGIQEEAHKNGYNLI-IVYSGSADPEEQKHALLTA--I-ERPVMGILLLSI 74 (290)
T ss_dssp -CCEEEEECCCCSSSHHHHHHHHHHHHHHTTTCEEE-EEC----------CHHHHH--H-SSCCSEEEEESC
T ss_pred cCCEEEEEeCCCCChHHHHHHHHHHHHHHHcCCeEE-EEeCCCCCHHHHHHHHHHH--H-hcCCCEEEEecc
Confidence 45677777643 344455567888899999999887 54 3333330122566666 3 346999998644
No 310
>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A
Probab=27.86 E-value=31 Score=31.51 Aligned_cols=28 Identities=39% Similarity=0.514 Sum_probs=25.9
Q ss_pred CCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 228 GKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 228 Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 2 ~k~vlVTGas~giG~~~a~~l~~~G~~V 29 (239)
T 2ekp_A 2 ERKALVTGGSRGIGRAIAEALVARGYRV 29 (239)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEE
Confidence 7899999999999999999999999854
No 311
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=27.85 E-value=26 Score=32.74 Aligned_cols=30 Identities=33% Similarity=0.273 Sum_probs=26.8
Q ss_pred CCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 226 TFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 226 l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
+.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 3 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V 32 (281)
T 3m1a_A 3 ESAKVWLVTGASSGFGRAIAEAAVAAGDTV 32 (281)
T ss_dssp -CCCEEEETTTTSHHHHHHHHHHHHTTCEE
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCEE
Confidence 478999999999999999999999999854
No 312
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=27.83 E-value=26 Score=33.29 Aligned_cols=27 Identities=30% Similarity=0.231 Sum_probs=22.7
Q ss_pred CCCeEEEECCCCCcchHHHHHhhhCCC
Q psy4615 227 FGKNAVVCGRSKNVGMPIAMLLHADGA 253 (477)
Q Consensus 227 ~Gk~vvViGrS~~VGkPLA~lL~~~~a 253 (477)
.||+++|+|.+..+|+-++..|+.++.
T Consensus 8 ~~~~vlVTGatGfIG~~l~~~Ll~~G~ 34 (338)
T 2rh8_A 8 GKKTACVVGGTGFVASLLVKLLLQKGY 34 (338)
T ss_dssp -CCEEEEECTTSHHHHHHHHHHHHTTC
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCC
Confidence 378899999999999999998887776
No 313
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=27.80 E-value=24 Score=33.33 Aligned_cols=31 Identities=39% Similarity=0.489 Sum_probs=26.3
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
++.||.++|+|.+.-+|+-++..|+.+|+.|
T Consensus 25 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V 55 (272)
T 4dyv_A 25 KTGKKIAIVTGAGSGVGRAVAVALAGAGYGV 55 (272)
T ss_dssp ---CCEEEETTTTSHHHHHHHHHHHHTTCEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEE
Confidence 4679999999999999999999999999854
No 314
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=27.76 E-value=39 Score=32.21 Aligned_cols=32 Identities=31% Similarity=0.388 Sum_probs=27.8
Q ss_pred CCCCCCeEEEECCCC--CcchHHHHHhhhCCCCc
Q psy4615 224 VETFGKNAVVCGRSK--NVGMPIAMLLHADGAGV 255 (477)
Q Consensus 224 i~l~Gk~vvViGrS~--~VGkPLA~lL~~~~a~v 255 (477)
.++.||.++|+|-+. -+|+-++..|+.+|+.|
T Consensus 26 ~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V 59 (296)
T 3k31_A 26 MLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEV 59 (296)
T ss_dssp CTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEE
T ss_pred hccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEE
Confidence 357899999999864 89999999999999854
No 315
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=27.57 E-value=32 Score=30.77 Aligned_cols=30 Identities=17% Similarity=0.044 Sum_probs=26.2
Q ss_pred CCCCeEEEECCCCCcchHHHHHhhhC--CCCc
Q psy4615 226 TFGKNAVVCGRSKNVGMPIAMLLHAD--GAGV 255 (477)
Q Consensus 226 l~Gk~vvViGrS~~VGkPLA~lL~~~--~a~v 255 (477)
..+|+++|+|.+..+|+.++..|+.+ +..|
T Consensus 2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V 33 (253)
T 1xq6_A 2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVA 33 (253)
T ss_dssp CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEE
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEE
Confidence 46899999999999999999999998 5544
No 316
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=27.34 E-value=28 Score=31.64 Aligned_cols=30 Identities=27% Similarity=0.231 Sum_probs=26.7
Q ss_pred CCCCeEEEECCCCCcchHHHHHhhh-CCCCc
Q psy4615 226 TFGKNAVVCGRSKNVGMPIAMLLHA-DGAGV 255 (477)
Q Consensus 226 l~Gk~vvViGrS~~VGkPLA~lL~~-~~a~v 255 (477)
.+||.++|+|.+.-+|+.++..|+. +++.|
T Consensus 2 ~~~k~vlITGasggIG~~~a~~L~~~~g~~V 32 (276)
T 1wma_A 2 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDV 32 (276)
T ss_dssp CCCCEEEESSCSSHHHHHHHHHHHHHSSSEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHhcCCeE
Confidence 3689999999999999999999999 88744
No 317
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=27.31 E-value=27 Score=32.75 Aligned_cols=27 Identities=11% Similarity=0.215 Sum_probs=23.2
Q ss_pred CCeEEEECCCCCcchHHHHHhhhCCCC
Q psy4615 228 GKNAVVCGRSKNVGMPIAMLLHADGAG 254 (477)
Q Consensus 228 Gk~vvViGrS~~VGkPLA~lL~~~~a~ 254 (477)
||+++|+|.+..+|+-++..|..++.+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~ 28 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNNWH 28 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTCE
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCCe
Confidence 688999999999999999999887763
No 318
>3uug_A Multiple sugar-binding periplasmic receptor CHVE; periplasmic binding protein, sugar-binding protein, sugar binding protein; HET: BDP; 1.75A {Agrobacterium tumefaciens} PDB: 3urm_A*
Probab=27.28 E-value=79 Score=29.51 Aligned_cols=63 Identities=13% Similarity=0.009 Sum_probs=42.0
Q ss_pred CCEEEEEEeCC-ChhhHHHHHHHHHHHHHcCCeeeeeEEecCCcccHH-hhhccccCCCCCCccEEEEcC
Q psy4615 101 VPTLTAILVGN-DSASSTYVNNKMKSAAKVGEVNALGVLYHLTLFGRS-KLINPMSIPISTGVSSHISQL 168 (477)
Q Consensus 101 ~P~LaiI~vGd-d~aS~~Yv~~k~k~a~~vGI~~~~~~~lp~~~~t~e-~~I~~L~~N~D~~V~GILVql 168 (477)
+.++++|.-.- ++--....+...+.|++.|.++. ...-..+. .++ +.++.+ -. .+|+||++.-
T Consensus 3 ~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~-~~~~~~~~-~~~~~~i~~~--~~-~~vdgiIi~~ 67 (330)
T 3uug_A 3 KGSVGIAMPTKSSARWIDDGNNIVKQLQEAGYKTD-LQYADDDI-PNQLSQIENM--VT-KGVKVLVIAS 67 (330)
T ss_dssp CCEEEEEECCSSSTHHHHHHHHHHHHHHHTTCEEE-EEECTTCH-HHHHHHHHHH--HH-HTCSEEEECC
T ss_pred CcEEEEEeCCCcchHHHHHHHHHHHHHHHcCCEEE-EeeCCCCH-HHHHHHHHHH--HH-cCCCEEEEEc
Confidence 35677776643 45555667888999999999988 66544333 222 666665 22 3699999963
No 319
>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=27.28 E-value=28 Score=31.28 Aligned_cols=29 Identities=31% Similarity=0.488 Sum_probs=25.5
Q ss_pred CCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 227 FGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 227 ~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 1 ~~k~vlVtGasggiG~~la~~l~~~G~~V 29 (242)
T 1uay_A 1 MERSALVTGGASGLGRAAALALKARGYRV 29 (242)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHHTCEE
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEE
Confidence 37899999999999999999999998844
No 320
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=27.12 E-value=21 Score=34.01 Aligned_cols=29 Identities=28% Similarity=0.270 Sum_probs=22.6
Q ss_pred CCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 227 FGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 227 ~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
.||+++|+|.+..+|+-++..|+.++.+|
T Consensus 4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V 32 (337)
T 2c29_D 4 QSETVCVTGASGFIGSWLVMRLLERGYTV 32 (337)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHTTCEE
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEE
Confidence 57889999998999999998888877643
No 321
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=27.09 E-value=30 Score=32.61 Aligned_cols=30 Identities=33% Similarity=0.464 Sum_probs=25.4
Q ss_pred CCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 226 TFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 226 l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
+.||.++|+|.+.-+|+-++..|+.+|+.|
T Consensus 22 ~~~k~~lVTGas~GIG~aia~~la~~G~~V 51 (279)
T 3sju_A 22 SRPQTAFVTGVSSGIGLAVARTLAARGIAV 51 (279)
T ss_dssp ---CEEEEESTTSHHHHHHHHHHHHTTCEE
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEE
Confidence 468999999999999999999999999854
No 322
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=26.94 E-value=28 Score=32.76 Aligned_cols=30 Identities=40% Similarity=0.525 Sum_probs=26.3
Q ss_pred CCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 226 TFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 226 l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
+.||.++|+|.+.-+|+-++..|+.+|+.|
T Consensus 25 ~~~k~~lVTGas~GIG~aia~~la~~G~~V 54 (267)
T 3u5t_A 25 ETNKVAIVTGASRGIGAAIAARLASDGFTV 54 (267)
T ss_dssp --CCEEEEESCSSHHHHHHHHHHHHHTCEE
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEE
Confidence 579999999999999999999999999854
No 323
>4a8p_A Putrescine carbamoyltransferase; ornithine agmatine deiminase route; HET: PAO; 2.00A {Enterococcus faecalis} PDB: 4a8h_A* 3txx_A
Probab=26.91 E-value=1.3e+02 Score=30.47 Aligned_cols=130 Identities=12% Similarity=0.108 Sum_probs=79.9
Q ss_pred EEEEEEeCCChhhHHHHHHHHHHHHHcCCeeeeeEEecCCc-----ccHHhhhccccCCCCCCccEEEEcCCCCCCCcHH
Q psy4615 103 TLTAILVGNDSASSTYVNNKMKSAAKVGEVNALGVLYHLTL-----FGRSKLINPMSIPISTGVSSHISQLPLPEHMVER 177 (477)
Q Consensus 103 ~LaiI~vGdd~aS~~Yv~~k~k~a~~vGI~~~~~~~lp~~~-----~t~e~~I~~L~~N~D~~V~GILVqlPLP~~ld~~ 177 (477)
.++.|..- |+.+. --+=..++.++|.++. .+. +.++ ||.++.++-| +.= +|+|++--| .+-...
T Consensus 43 ~la~lF~e--pSTRT-R~SFE~A~~~LGg~vi-~l~-~~~ssl~kgEsl~DTarvL--s~y--~D~IviR~~--~~~~~~ 111 (355)
T 4a8p_A 43 SLGMIFQQ--SSTRT-RVSFETAMEQLGGHGE-YLA-PGQIQLGGHETIEDTSRVL--SRL--VDILMARVE--RHHSIV 111 (355)
T ss_dssp EEEEEESS--CCSHH-HHHHHHHHHHTTCEEE-EEC-BTTBCBTTTBCHHHHHHHH--TTT--CSEEEEECS--SHHHHH
T ss_pred EEEEEecC--CChhh-HhhHHHHHHHcCCeEE-EeC-cccccCCCCcCHHHHHHHH--HHh--CCEEEEecC--cHHHHH
Confidence 45555442 33332 2244788999999887 553 2222 0111555555 433 899998755 232233
Q ss_pred HHHhhcCCCCCCCCCCccchHHhhcCCCCcccCCHHH-HHHHHHHh--CCCCCCCeEEEECCCCCcchHHHHHhhhCCCC
Q psy4615 178 AVCNAVAPHKDVDGFNIVNVGRFCLDLKTLIPCTPLG-VQELIRRY--KVETFGKNAVVCGRSKNVGMPIAMLLHADGAG 254 (477)
Q Consensus 178 ~l~~aI~p~KDVDGl~p~nlg~l~~g~~~f~PcTa~A-v~~Lle~~--gi~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~ 254 (477)
.+.+.. +++-+|.| .....||=+.+ ++.+.|+. |-.++|++++++|-.+.|..-+..++..-|++
T Consensus 112 ~lA~~~-------~vPVINag-----~~~~HPtQaLaDl~TI~E~~~~G~~l~glkva~vGD~~rva~Sl~~~~~~~G~~ 179 (355)
T 4a8p_A 112 DLANCA-------TIPVINGM-----SDYNHPTQELGDLCTMVEHLPEGKKLEDCKVVFVGDATQVCFSLGLITTKMGMN 179 (355)
T ss_dssp HHHHHC-------SSCEEECC-----CSSCCHHHHHHHHHHHHHTCCTTCCGGGCEEEEESCCCHHHHHHHHHHHHTTCE
T ss_pred HHHHhC-------CCCEEeCC-----CCCCCcHHHHHHHHHHHHHhhcCCCCCCCEEEEECCCchhHHHHHHHHHHcCCE
Confidence 333322 34556643 35688998887 67777777 54689999999998777777777777766764
Q ss_pred c
Q psy4615 255 V 255 (477)
Q Consensus 255 v 255 (477)
+
T Consensus 180 v 180 (355)
T 4a8p_A 180 F 180 (355)
T ss_dssp E
T ss_pred E
Confidence 4
No 324
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=26.76 E-value=30 Score=32.27 Aligned_cols=29 Identities=34% Similarity=0.485 Sum_probs=26.8
Q ss_pred CCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 227 FGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 227 ~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 3 ~~k~vlVTGas~gIG~aia~~l~~~G~~v 31 (258)
T 3oid_A 3 QNKCALVTGSSRGVGKAAAIRLAENGYNI 31 (258)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHTTCEE
T ss_pred CCCEEEEecCCchHHHHHHHHHHHCCCEE
Confidence 58999999999999999999999999854
No 325
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=26.70 E-value=19 Score=33.54 Aligned_cols=27 Identities=19% Similarity=0.144 Sum_probs=24.4
Q ss_pred CCCeEEEECCCCCcchHHHHHhhhCCC
Q psy4615 227 FGKNAVVCGRSKNVGMPIAMLLHADGA 253 (477)
Q Consensus 227 ~Gk~vvViGrS~~VGkPLA~lL~~~~a 253 (477)
.+|+++|+|.+.-+|+.++..|+.+++
T Consensus 2 ~~k~vlVTGasg~IG~~la~~L~~~G~ 28 (267)
T 3rft_A 2 AMKRLLVTGAAGQLGRVMRERLAPMAE 28 (267)
T ss_dssp CEEEEEEESTTSHHHHHHHHHTGGGEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhcCC
Confidence 578999999999999999999988776
No 326
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=26.56 E-value=27 Score=31.52 Aligned_cols=28 Identities=36% Similarity=0.504 Sum_probs=25.7
Q ss_pred CCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 228 GKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 228 Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 1 ~k~vlVTGasggiG~~la~~l~~~G~~v 28 (244)
T 1edo_A 1 SPVVVVTGASRGIGKAIALSLGKAGCKV 28 (244)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTCEE
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEE
Confidence 6899999999999999999999998854
No 327
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=26.42 E-value=57 Score=31.23 Aligned_cols=41 Identities=32% Similarity=0.366 Sum_probs=32.9
Q ss_pred HHHHHHHHhCCCCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 214 GVQELIRRYKVETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 214 Av~~Lle~~gi~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
++..++...+.++.||++.|+| ..-+|+.++..|...++.|
T Consensus 141 a~~~~l~~~~~~l~g~~v~IiG-~G~iG~~~a~~l~~~G~~V 181 (293)
T 3d4o_A 141 TIMMAIQHTDFTIHGANVAVLG-LGRVGMSVARKFAALGAKV 181 (293)
T ss_dssp HHHHHHHHCSSCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHhcCCCCCCCEEEEEe-eCHHHHHHHHHHHhCCCEE
Confidence 3444566678899999999999 5667999999998888643
No 328
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=26.41 E-value=25 Score=32.49 Aligned_cols=31 Identities=23% Similarity=0.206 Sum_probs=27.7
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhh---CCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHA---DGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~---~~a~v 255 (477)
+++||.++|+|.+.-+|+-++..|+. +++.|
T Consensus 3 ~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V 36 (259)
T 1oaa_A 3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVM 36 (259)
T ss_dssp CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEE
T ss_pred CCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeE
Confidence 57899999999999999999999998 78754
No 329
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=26.20 E-value=34 Score=31.47 Aligned_cols=28 Identities=21% Similarity=0.434 Sum_probs=25.9
Q ss_pred CCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 228 GKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 228 Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V 29 (247)
T 3dii_A 2 NRGVIVTGGGHGIGKQICLDFLEAGDKV 29 (247)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEE
Confidence 7899999999999999999999999854
No 330
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=26.19 E-value=31 Score=32.99 Aligned_cols=43 Identities=12% Similarity=-0.031 Sum_probs=32.1
Q ss_pred ccCCHHHHHHHHHHhCCCCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 208 IPCTPLGVQELIRRYKVETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 208 ~PcTa~Av~~Lle~~gi~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
.|.|+.-+..-+ .+.+|+++|+|.+..+|+-++..|..++..|
T Consensus 10 ~~~~~~~~~~~~-----~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V 52 (351)
T 3ruf_A 10 YMSRYEEITQQL-----IFSPKTWLITGVAGFIGSNLLEKLLKLNQVV 52 (351)
T ss_dssp CCHHHHHHHHHH-----HHSCCEEEEETTTSHHHHHHHHHHHHTTCEE
T ss_pred HHHHHhhHHhhC-----CCCCCeEEEECCCcHHHHHHHHHHHHCCCEE
Confidence 344555444332 3468999999999999999999999888733
No 331
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=26.08 E-value=26 Score=34.24 Aligned_cols=30 Identities=27% Similarity=0.236 Sum_probs=26.0
Q ss_pred CCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 226 TFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 226 l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
+.||.++|+|.|.-+|+-++..|+.+|+.|
T Consensus 3 m~~k~vlVTGas~GIG~aia~~L~~~G~~V 32 (324)
T 3u9l_A 3 MSKKIILITGASSGFGRLTAEALAGAGHRV 32 (324)
T ss_dssp --CCEEEESSCSSHHHHHHHHHHHHTTCEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEE
Confidence 568999999999999999999999999854
No 332
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=26.05 E-value=36 Score=30.78 Aligned_cols=29 Identities=34% Similarity=0.479 Sum_probs=26.0
Q ss_pred CCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 227 FGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 227 ~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 1 ~~k~vlItGasggiG~~~a~~l~~~G~~V 29 (250)
T 2cfc_A 1 MSRVAIVTGASSGNGLAIATRFLARGDRV 29 (250)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHTTCEE
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEE
Confidence 37899999999999999999999998754
No 333
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=26.00 E-value=1.4e+02 Score=30.05 Aligned_cols=115 Identities=9% Similarity=-0.055 Sum_probs=74.6
Q ss_pred HHHHHHHHcCCeeeeeEEecCCcc-----cHHhhhccccCCCCCCccEEEEcCCCCCCCcHHHHHhhcCCCCCCCCCCcc
Q psy4615 121 NKMKSAAKVGEVNALGVLYHLTLF-----GRSKLINPMSIPISTGVSSHISQLPLPEHMVERAVCNAVAPHKDVDGFNIV 195 (477)
Q Consensus 121 ~k~k~a~~vGI~~~~~~~lp~~~~-----t~e~~I~~L~~N~D~~V~GILVqlPLP~~ld~~~l~~aI~p~KDVDGl~p~ 195 (477)
+=..++.++|.++. .+. +.++. +-++.++-| +.= +|+|++--| .|-..+.+.+.. +.+-+
T Consensus 61 SFE~A~~~LGg~~i-~l~-~~~ss~~kgEsl~DTarvL--s~~--~D~IviR~~--~~~~~~~lA~~~-------~vPVI 125 (333)
T 1duv_G 61 SFEVAAYDQGARVT-YLG-PSGSQIGHKESIKDTARVL--GRM--YDGIQYRGY--GQEIVETLAEYA-------SVPVW 125 (333)
T ss_dssp HHHHHHHHTTCEEE-EEC-SSSSCBTTTBCHHHHHHHH--TTT--CSEEEEECS--CHHHHHHHHHHH-------SSCEE
T ss_pred HHHHHHHHcCCeEE-EEC-CccccCcCCCcHHHHHHHH--HHh--CCEEEEEcC--CchHHHHHHHhC-------CCCeE
Confidence 44788999999887 554 22220 111555555 333 689998755 333333443332 35556
Q ss_pred chHHhhcCCCCcccCCHHH-HHHHHHH-hCCCCCCCeEEEECCC-CCcchHHHHHhhhCCCCc
Q psy4615 196 NVGRFCLDLKTLIPCTPLG-VQELIRR-YKVETFGKNAVVCGRS-KNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 196 nlg~l~~g~~~f~PcTa~A-v~~Lle~-~gi~l~Gk~vvViGrS-~~VGkPLA~lL~~~~a~v 255 (477)
|- +...+.||-+.| ++.+.|+ .|-+++|.+++++|-. +-|..-+...+..-|+++
T Consensus 126 Na-----~~~~~HPtQ~LaDl~Ti~e~~~g~~l~gl~ia~vGD~~~~va~Sl~~~~~~~G~~v 183 (333)
T 1duv_G 126 NG-----LTNEFHPTQLLADLLTMQEHLPGKAFNEMTLVYAGDARNNMGNSMLEAAALTGLDL 183 (333)
T ss_dssp ES-----CCSSCCHHHHHHHHHHHHHHSTTCCGGGCEEEEESCTTSHHHHHHHHHHHHHCCEE
T ss_pred cC-----CCCCCCchHHHHHHHHHHHHhcCCCCCCcEEEEECCCccchHHHHHHHHHHcCCEE
Confidence 63 346788998887 6777777 6657899999999975 567777777777667754
No 334
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=26.00 E-value=39 Score=31.19 Aligned_cols=31 Identities=26% Similarity=0.257 Sum_probs=26.9
Q ss_pred CCCCCeEEEECCC-CCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRS-KNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS-~~VGkPLA~lL~~~~a~v 255 (477)
.+.||.++|+|.+ .=+|+-++..|+.+++.|
T Consensus 19 ~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V 50 (266)
T 3o38_A 19 LLKGKVVLVTAAAGTGIGSTTARRALLEGADV 50 (266)
T ss_dssp TTTTCEEEESSCSSSSHHHHHHHHHHHTTCEE
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHCCCEE
Confidence 4789999999986 469999999999999854
No 335
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=25.68 E-value=31 Score=32.69 Aligned_cols=28 Identities=25% Similarity=0.257 Sum_probs=24.7
Q ss_pred CCCeEEEECCCCCcchHHHHHhhhCCCC
Q psy4615 227 FGKNAVVCGRSKNVGMPIAMLLHADGAG 254 (477)
Q Consensus 227 ~Gk~vvViGrS~~VGkPLA~lL~~~~a~ 254 (477)
.+++++|+|.+..+|+-++..|+.++..
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~ 31 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAHGYD 31 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHTTCE
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHCCCc
Confidence 4689999999999999999999888873
No 336
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=25.66 E-value=25 Score=31.79 Aligned_cols=27 Identities=19% Similarity=0.327 Sum_probs=24.4
Q ss_pred CCCeEEEECCCCCcchHHHHHhhhCCC
Q psy4615 227 FGKNAVVCGRSKNVGMPIAMLLHADGA 253 (477)
Q Consensus 227 ~Gk~vvViGrS~~VGkPLA~lL~~~~a 253 (477)
.||.++|+|.+.-+|+-++..|+.+++
T Consensus 1 ~~k~vlITGasggiG~~la~~l~~~G~ 27 (244)
T 2bd0_A 1 MKHILLITGAGKGIGRAIALEFARAAR 27 (244)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHHHTT
T ss_pred CCCEEEEECCCChHHHHHHHHHHHhcC
Confidence 378999999999999999999999887
No 337
>2vk2_A YTFQ, ABC transporter periplasmic-binding protein YTFQ; transport protein, galactofuranose; HET: GZL; 1.20A {Escherichia coli}
Probab=25.62 E-value=87 Score=29.09 Aligned_cols=62 Identities=16% Similarity=0.027 Sum_probs=39.6
Q ss_pred CEEEEEEeCC-ChhhHHHHHHHHHHHHHcCCeeeeeEEecCCcccHH-hhhccccCCCCCCccEEEEcC
Q psy4615 102 PTLTAILVGN-DSASSTYVNNKMKSAAKVGEVNALGVLYHLTLFGRS-KLINPMSIPISTGVSSHISQL 168 (477)
Q Consensus 102 P~LaiI~vGd-d~aS~~Yv~~k~k~a~~vGI~~~~~~~lp~~~~t~e-~~I~~L~~N~D~~V~GILVql 168 (477)
.+++++.-.. ++-.....+...+.|++.|.++. ...-..+. ..+ +.++.+ . ..+|+|||+.-
T Consensus 3 ~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~~l~-~~~~~~~~-~~~~~~i~~l--~-~~~vdgiIi~~ 66 (306)
T 2vk2_A 3 LTVGFSQVGSESGWRAAETNVAKSEAEKRGITLK-IADGQQKQ-ENQIKAVRSF--V-AQGVDAIFIAP 66 (306)
T ss_dssp CEEEEEECCCCSHHHHHHHHHHHHHHHHHTCEEE-EEECTTCH-HHHHHHHHHH--H-HHTCSEEEECC
T ss_pred eEEEEEeCCCCCHHHHHHHHHHHHHHHHcCCEEE-EeCCCCCH-HHHHHHHHHH--H-HcCCCEEEEeC
Confidence 3567776543 33344556778889999999888 65543333 222 666666 3 34699999963
No 338
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=25.53 E-value=30 Score=31.85 Aligned_cols=31 Identities=26% Similarity=0.406 Sum_probs=26.8
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
++.+|.++|+|.+.-+|+-++..|+.+++.|
T Consensus 4 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~v 34 (264)
T 3i4f_A 4 GRFVRHALITAGTKGLGKQVTEKLLAKGYSV 34 (264)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHHTTCEE
T ss_pred ccccCEEEEeCCCchhHHHHHHHHHHCCCEE
Confidence 4568999999999999999999999999854
No 339
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=25.52 E-value=33 Score=30.07 Aligned_cols=27 Identities=22% Similarity=0.307 Sum_probs=24.1
Q ss_pred CC-eEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 228 GK-NAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 228 Gk-~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
|| +++|+|.+.-+|+-++..|+ ++++|
T Consensus 2 ~kM~vlVtGasg~iG~~~~~~l~-~g~~V 29 (202)
T 3d7l_A 2 NAMKILLIGASGTLGSAVKERLE-KKAEV 29 (202)
T ss_dssp CSCEEEEETTTSHHHHHHHHHHT-TTSEE
T ss_pred CCcEEEEEcCCcHHHHHHHHHHH-CCCeE
Confidence 56 89999999999999999999 88754
No 340
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=25.51 E-value=30 Score=33.33 Aligned_cols=28 Identities=25% Similarity=0.363 Sum_probs=22.0
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCC
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADG 252 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~ 252 (477)
++.|++++|+|.+..+|+.++..|..++
T Consensus 43 ~~~~~~vlVtGatG~iG~~l~~~L~~~g 70 (357)
T 2x6t_A 43 GIEGRMIIVTGGAGFIGSNIVKALNDKG 70 (357)
T ss_dssp -----CEEEETTTSHHHHHHHHHHHHTT
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHCC
Confidence 3578999999999999999999999888
No 341
>2rgy_A Transcriptional regulator, LACI family; 11011J, NYSGXRC, transctiptional regulator, SUG binding protein, structural genomics, PSI-2; 2.05A {Burkholderia phymatum}
Probab=25.46 E-value=1.1e+02 Score=28.08 Aligned_cols=64 Identities=5% Similarity=-0.142 Sum_probs=41.8
Q ss_pred CCCEEEEEEeC-CChhhHHHHHHHHHHHHHcCCeeeeeEEecCCcccHH-h---hhccccCCCCCCccEEEEcC
Q psy4615 100 RVPTLTAILVG-NDSASSTYVNNKMKSAAKVGEVNALGVLYHLTLFGRS-K---LINPMSIPISTGVSSHISQL 168 (477)
Q Consensus 100 ~~P~LaiI~vG-dd~aS~~Yv~~k~k~a~~vGI~~~~~~~lp~~~~t~e-~---~I~~L~~N~D~~V~GILVql 168 (477)
+..++++|.-. +++--...++...+.|++.|.... ......+. ..+ + .++.+ - ...|+|||+.-
T Consensus 7 ~~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~-~~~~~~~~-~~~~~~~~~~~~l--~-~~~vdgiIi~~ 75 (290)
T 2rgy_A 7 QLGIIGLFVPTFFGSYYGTILKQTDLELRAVHRHVV-VATGCGES-TPREQALEAVRFL--I-GRDCDGVVVIS 75 (290)
T ss_dssp -CCEEEEECSCSCSHHHHHHHHHHHHHHHHTTCEEE-EECCCSSS-CHHHHHHHHHHHH--H-HTTCSEEEECC
T ss_pred CCCeEEEEeCCCCCchHHHHHHHHHHHHHHCCCEEE-EEeCCCch-hhhhhHHHHHHHH--H-hcCccEEEEec
Confidence 45567777642 344445667888899999999887 65444343 223 5 67776 3 34699999963
No 342
>2fn9_A Ribose ABC transporter, periplasmic ribose-bindin; RBP, ribose binding protein, periplasmic binding protein, thermophilic proteins; 1.40A {Thermotoga maritima} PDB: 2fn8_A*
Probab=25.23 E-value=1.3e+02 Score=27.33 Aligned_cols=62 Identities=8% Similarity=0.056 Sum_probs=39.9
Q ss_pred EEEEEEeC-CChhhHHHHHHHHHHHHHcCCeeeeeEEecCCcccHH-hhhccccCCCCCCccEEEEcCC
Q psy4615 103 TLTAILVG-NDSASSTYVNNKMKSAAKVGEVNALGVLYHLTLFGRS-KLINPMSIPISTGVSSHISQLP 169 (477)
Q Consensus 103 ~LaiI~vG-dd~aS~~Yv~~k~k~a~~vGI~~~~~~~lp~~~~t~e-~~I~~L~~N~D~~V~GILVqlP 169 (477)
++++|.-. +++-...+.+...+.|++.|.+.. ...-..+. ..+ +.++.+ .. .+|+||++.-.
T Consensus 4 ~Ig~i~~~~~~~~~~~~~~gi~~~~~~~g~~~~-~~~~~~~~-~~~~~~~~~l--~~-~~vdgiI~~~~ 67 (290)
T 2fn9_A 4 KMAIVISTLNNPWFVVLAETAKQRAEQLGYEAT-IFDSQNDT-AKESAHFDAI--IA-AGYDAIIFNPT 67 (290)
T ss_dssp EEEEEESCSSSHHHHHHHHHHHHHHHHTTCEEE-EEECTTCH-HHHHHHHHHH--HH-TTCSEEEECCS
T ss_pred EEEEEeCCCCChHHHHHHHHHHHHHHHcCCEEE-EeCCCCCH-HHHHHHHHHH--HH-cCCCEEEEecC
Confidence 45666543 345455667888899999999887 65543333 222 667766 33 46999999743
No 343
>3lft_A Uncharacterized protein; ABC, ATPase, cassette, L-Trp, PSI, MCSG, structural genomics center for structural genomics; HET: MSE TRP; 1.35A {Streptococcus pneumoniae}
Probab=25.05 E-value=1.8e+02 Score=26.82 Aligned_cols=63 Identities=5% Similarity=-0.057 Sum_probs=41.9
Q ss_pred CCEEEEEEeCCChhhHHHHHHHHHHHHHcCC---eeeeeEEecCCcc-cHH-hhhccccCCCCCCccEEEEc
Q psy4615 101 VPTLTAILVGNDSASSTYVNNKMKSAAKVGE---VNALGVLYHLTLF-GRS-KLINPMSIPISTGVSSHISQ 167 (477)
Q Consensus 101 ~P~LaiI~vGdd~aS~~Yv~~k~k~a~~vGI---~~~~~~~lp~~~~-t~e-~~I~~L~~N~D~~V~GILVq 167 (477)
+.++++|..-++|--..-++...+.|++.|. +.. ......+.+ .++ +.++++ - +.+||||++.
T Consensus 2 ~~~Igvi~~~~~p~~~~i~~gi~~~l~~~gy~g~~v~-l~~~~~~~~~~~~~~~~~~l--~-~~~vDgII~~ 69 (295)
T 3lft_A 2 NAKIGVLQFVSHPSLDLIYKGIQDGLAEEGYKDDQVK-IDFMNSEGDQSKVATMSKQL--V-ANGNDLVVGI 69 (295)
T ss_dssp CEEEEEEECSCCHHHHHHHHHHHHHHHHTTCCGGGEE-EEEEECTTCHHHHHHHHHHH--T-TSSCSEEEEE
T ss_pred ceEEEEEEccCChhHHHHHHHHHHHHHHcCCCCCceE-EEEecCCCCHHHHHHHHHHH--H-hcCCCEEEEC
Confidence 3467777555677667778899999999999 655 332222220 222 677777 3 5579999985
No 344
>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}
Probab=25.05 E-value=34 Score=31.29 Aligned_cols=28 Identities=29% Similarity=0.261 Sum_probs=22.1
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCC
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGA 253 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a 253 (477)
++.||.++|+|.+.-+|+-++..|+. +.
T Consensus 2 ~l~~k~vlITGas~gIG~~~a~~l~~-g~ 29 (245)
T 3e9n_A 2 SLKKKIAVVTGATGGMGIEIVKDLSR-DH 29 (245)
T ss_dssp ----CEEEEESTTSHHHHHHHHHHTT-TS
T ss_pred CCCCCEEEEEcCCCHHHHHHHHHHhC-CC
Confidence 36799999999999999999999976 55
No 345
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=24.88 E-value=33 Score=33.36 Aligned_cols=28 Identities=11% Similarity=0.109 Sum_probs=24.3
Q ss_pred CCCCeEEEECCCCCcchHHHHHhhhC-CC
Q psy4615 226 TFGKNAVVCGRSKNVGMPIAMLLHAD-GA 253 (477)
Q Consensus 226 l~Gk~vvViGrS~~VGkPLA~lL~~~-~a 253 (477)
+.||+++|+|.+..+|+.++..|+.+ +.
T Consensus 19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~ 47 (344)
T 2gn4_A 19 LDNQTILITGGTGSFGKCFVRKVLDTTNA 47 (344)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHHCCC
T ss_pred hCCCEEEEECCCcHHHHHHHHHHHhhCCC
Confidence 57899999999999999999998877 65
No 346
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=24.85 E-value=30 Score=31.16 Aligned_cols=28 Identities=32% Similarity=0.571 Sum_probs=25.3
Q ss_pred CCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 228 GKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 228 Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 1 ~k~vlITGasggiG~~~a~~l~~~G~~v 28 (245)
T 2ph3_A 1 MRKALITGASRGIGRAIALRLAEDGFAL 28 (245)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHTTTCEE
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEE
Confidence 5889999999999999999999998754
No 347
>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=24.84 E-value=41 Score=29.46 Aligned_cols=27 Identities=11% Similarity=0.137 Sum_probs=24.9
Q ss_pred CCCeEEEECCCCCcchHHHHHhhhCCC
Q psy4615 227 FGKNAVVCGRSKNVGMPIAMLLHADGA 253 (477)
Q Consensus 227 ~Gk~vvViGrS~~VGkPLA~lL~~~~a 253 (477)
.+++++|+|.+..+|+.++..|..++.
T Consensus 4 ~~~~vlVtGatG~iG~~l~~~l~~~g~ 30 (215)
T 2a35_A 4 TPKRVLLAGATGLTGEHLLDRILSEPT 30 (215)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHCTT
T ss_pred CCceEEEECCCcHHHHHHHHHHHhCCC
Confidence 578999999999999999999999876
No 348
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=24.82 E-value=32 Score=32.83 Aligned_cols=28 Identities=25% Similarity=0.270 Sum_probs=23.0
Q ss_pred CCCCeEEEECCCCCcchHHHHHhhhCCC
Q psy4615 226 TFGKNAVVCGRSKNVGMPIAMLLHADGA 253 (477)
Q Consensus 226 l~Gk~vvViGrS~~VGkPLA~lL~~~~a 253 (477)
+.+++++|+|.+..+|+.++..|..++.
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~ 52 (343)
T 2b69_A 25 KDRKRILITGGAGFVGSHLTDKLMMDGH 52 (343)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTC
T ss_pred cCCCEEEEEcCccHHHHHHHHHHHHCCC
Confidence 4678999999999999999999987765
No 349
>2fqx_A Membrane lipoprotein TMPC; ABC transport system, ligand-binding protein, guanosine, TP0319, transport protein; HET: GMP; 1.70A {Treponema pallidum} PDB: 2fqw_A* 2fqy_A*
Probab=24.39 E-value=1.2e+02 Score=28.86 Aligned_cols=63 Identities=8% Similarity=-0.054 Sum_probs=39.9
Q ss_pred CCEEEEEE-eCC--C-hhhHHHHHHHHHHHHHcCCeeeeeEEecCCcccHHhhhccccCCCCCCccEEEEcC
Q psy4615 101 VPTLTAIL-VGN--D-SASSTYVNNKMKSAAKVGEVNALGVLYHLTLFGRSKLINPMSIPISTGVSSHISQL 168 (477)
Q Consensus 101 ~P~LaiI~-vGd--d-~aS~~Yv~~k~k~a~~vGI~~~~~~~lp~~~~t~e~~I~~L~~N~D~~V~GILVql 168 (477)
+.++++|. +|+ | +=...-.+...+.|++.|+++. ...-..+. .+++.++.+ - +..++||++.-
T Consensus 4 ~~~Ig~v~~~g~~~d~~f~~~~~~Gi~~~~~~~g~~~~-~~~~~~~~-~~~~~l~~l--~-~~~~dgIi~~~ 70 (318)
T 2fqx_A 4 DFVVGMVTDSGDIDDKSFNQQVWEGISRFAQENNAKCK-YVTASTDA-EYVPSLSAF--A-DENMGLVVACG 70 (318)
T ss_dssp CCEEEEEESSSCTTSSSHHHHHHHHHHHHHHHTTCEEE-EEECCSGG-GHHHHHHHH--H-HTTCSEEEEES
T ss_pred CcEEEEEEcCCCCCCccHHHHHHHHHHHHHHHhCCeEE-EEeCCCHH-HHHHHHHHH--H-HcCCCEEEECC
Confidence 45788887 343 2 3334446788899999999877 55433222 223566666 3 34699999863
No 350
>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}
Probab=24.37 E-value=30 Score=37.14 Aligned_cols=32 Identities=34% Similarity=0.469 Sum_probs=28.8
Q ss_pred CCCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 224 VETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 224 i~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
.++.||.++|+|.+.=+|+-+|..|+.+|+.|
T Consensus 15 ~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~V 46 (613)
T 3oml_A 15 LRYDGRVAVVTGAGAGLGREYALLFAERGAKV 46 (613)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEE
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEE
Confidence 47899999999999999999999999998843
No 351
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=24.36 E-value=27 Score=33.58 Aligned_cols=30 Identities=13% Similarity=0.018 Sum_probs=26.2
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCC
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAG 254 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~ 254 (477)
++.+++++|+|.+..+|+-++..|..++.+
T Consensus 24 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~ 53 (352)
T 1sb8_A 24 PAQPKVWLITGVAGFIGSNLLETLLKLDQK 53 (352)
T ss_dssp HHSCCEEEEETTTSHHHHHHHHHHHHTTCE
T ss_pred CccCCeEEEECCCcHHHHHHHHHHHHCCCE
Confidence 467899999999999999999999888763
No 352
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=24.32 E-value=37 Score=32.24 Aligned_cols=28 Identities=18% Similarity=0.219 Sum_probs=23.9
Q ss_pred CCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 228 GKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 228 Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
+|+++|+|.+..+|+.++..|+.++..|
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V 29 (348)
T 1ek6_A 2 AEKVLVTGGAGYIGSHTVLELLEAGYLP 29 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCCE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEE
Confidence 6789999999999999999998887644
No 353
>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*
Probab=24.22 E-value=32 Score=33.49 Aligned_cols=34 Identities=21% Similarity=0.240 Sum_probs=24.8
Q ss_pred hCCCCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 222 YKVETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 222 ~gi~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
++..+.|.+++|+|.+..+|+-++..|+.++.+|
T Consensus 5 ~~~~~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V 38 (404)
T 1i24_A 5 HHHHHHGSRVMVIGGDGYCGWATALHLSKKNYEV 38 (404)
T ss_dssp -------CEEEEETTTSHHHHHHHHHHHHTTCEE
T ss_pred cccccCCCeEEEeCCCcHHHHHHHHHHHhCCCeE
Confidence 3456789999999999999999999999988743
No 354
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=24.06 E-value=33 Score=31.96 Aligned_cols=30 Identities=30% Similarity=0.384 Sum_probs=26.8
Q ss_pred CCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 226 TFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 226 l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
+.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 23 ~~~k~vlITGas~gIG~~~a~~l~~~G~~v 52 (269)
T 3gk3_A 23 QAKRVAFVTGGMGGLGAAISRRLHDAGMAV 52 (269)
T ss_dssp -CCCEEEETTTTSHHHHHHHHHHHTTTCEE
T ss_pred hcCCEEEEECCCchHHHHHHHHHHHCCCEE
Confidence 579999999999999999999999999854
No 355
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=24.06 E-value=36 Score=30.61 Aligned_cols=29 Identities=34% Similarity=0.538 Sum_probs=26.3
Q ss_pred CCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 227 FGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 227 ~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
.+|.++|+|.+.-+|+-++..|+.+++.|
T Consensus 4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V 32 (234)
T 2ehd_A 4 MKGAVLITGASRGIGEATARLLHAKGYRV 32 (234)
T ss_dssp CCCEEEESSTTSHHHHHHHHHHHHTTCEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEE
Confidence 57899999999999999999999998854
No 356
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=23.90 E-value=40 Score=31.07 Aligned_cols=28 Identities=39% Similarity=0.541 Sum_probs=25.8
Q ss_pred CCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 228 GKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 228 Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V 29 (256)
T 1geg_A 2 KKVALVTGAGQGIGKAIALRLVKDGFAV 29 (256)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEE
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEE
Confidence 7899999999999999999999999854
No 357
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=23.90 E-value=33 Score=33.41 Aligned_cols=30 Identities=40% Similarity=0.446 Sum_probs=27.2
Q ss_pred CCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 226 TFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 226 l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
+.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 44 l~~k~~lVTGas~GIG~aia~~La~~G~~V 73 (328)
T 2qhx_A 44 PTVPVALVTGAAKRLGRSIAEGLHAEGYAV 73 (328)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHTTCEE
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCCEE
Confidence 689999999999999999999999999854
No 358
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=23.86 E-value=1.1e+02 Score=27.74 Aligned_cols=63 Identities=8% Similarity=-0.043 Sum_probs=43.7
Q ss_pred CEEEEEEeCC-ChhhHHHHHHHHHHHHHcCCeeeeeEEecCCcccHH-hhhccccCCCCCCccEEEEcCC
Q psy4615 102 PTLTAILVGN-DSASSTYVNNKMKSAAKVGEVNALGVLYHLTLFGRS-KLINPMSIPISTGVSSHISQLP 169 (477)
Q Consensus 102 P~LaiI~vGd-d~aS~~Yv~~k~k~a~~vGI~~~~~~~lp~~~~t~e-~~I~~L~~N~D~~V~GILVqlP 169 (477)
.++++|.-.- ++--...++...+.|++.|.++. .+....+. ..+ +.++.+ . ..+|+|||+.-.
T Consensus 16 ~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~-~~~~~~~~-~~~~~~~~~l--~-~~~vdgiIi~~~ 80 (298)
T 3tb6_A 16 KTIGVLTTYISDYIFPSIIRGIESYLSEQGYSML-LTSTNNNP-DNERRGLENL--L-SQHIDGLIVEPT 80 (298)
T ss_dssp CEEEEEESCSSSTTHHHHHHHHHHHHHHTTCEEE-EEECTTCH-HHHHHHHHHH--H-HTCCSEEEECCS
T ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHHHCCCEEE-EEeCCCCh-HHHHHHHHHH--H-HCCCCEEEEecc
Confidence 5677776543 44456667888999999999998 77655554 223 667766 3 457999999643
No 359
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=23.76 E-value=21 Score=34.07 Aligned_cols=28 Identities=18% Similarity=0.240 Sum_probs=26.0
Q ss_pred CCCCeEEEECCCCCcchHHHHHhhhCCC
Q psy4615 226 TFGKNAVVCGRSKNVGMPIAMLLHADGA 253 (477)
Q Consensus 226 l~Gk~vvViGrS~~VGkPLA~lL~~~~a 253 (477)
+.||.++|+|.+.-+|+-++..|+.+++
T Consensus 31 l~~k~~lVTGas~GIG~aia~~l~~~G~ 58 (287)
T 3rku_A 31 LAKKTVLITGASAGIGKATALEYLEASN 58 (287)
T ss_dssp HTTCEEEEESTTSHHHHHHHHHHHHHHT
T ss_pred cCCCEEEEecCCChHHHHHHHHHHHcCC
Confidence 5899999999999999999999998876
No 360
>2rjo_A Twin-arginine translocation pathway signal protei; PSI-2, NYSGXRC, twin arginine translocation pathway signal P structural genomics; HET: GAL; 2.05A {Burkholderia phytofirmans}
Probab=23.71 E-value=94 Score=29.30 Aligned_cols=63 Identities=10% Similarity=-0.032 Sum_probs=41.3
Q ss_pred CCCEEEEEEeC-CChhhHHHHHHHHHHHHHcCCeeeeeEEecCCcccHH-hhhccccCCCCCC--ccEEEEc
Q psy4615 100 RVPTLTAILVG-NDSASSTYVNNKMKSAAKVGEVNALGVLYHLTLFGRS-KLINPMSIPISTG--VSSHISQ 167 (477)
Q Consensus 100 ~~P~LaiI~vG-dd~aS~~Yv~~k~k~a~~vGI~~~~~~~lp~~~~t~e-~~I~~L~~N~D~~--V~GILVq 167 (477)
+..++++|.-. +++-....++...+.|++.|+++. ......+. ..+ +.++.+ -. .+ |+|||+.
T Consensus 4 ~s~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~l~-~~~~~~~~-~~~~~~i~~l--~~-~~~~vdgiIi~ 70 (332)
T 2rjo_A 4 GQTTLACSFRSLTNPYYTAFNKGAQSFAKSVGLPYV-PLTTEGSS-EKGIADIRAL--LQ-KTGGNLVLNVD 70 (332)
T ss_dssp CCCEEEEEESCTTSHHHHHHHHHHHHHHHHHTCCEE-EEECTTCH-HHHHHHHHHH--HH-HTTTCEEEEEC
T ss_pred CccEEEEEecCCCcHHHHHHHHHHHHHHHHcCCEEE-EecCCCCH-HHHHHHHHHH--HH-CCCCCCEEEEe
Confidence 45567777643 344455667888899999999888 66544443 222 566666 32 35 9999995
No 361
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=23.49 E-value=35 Score=31.48 Aligned_cols=29 Identities=34% Similarity=0.503 Sum_probs=25.8
Q ss_pred CCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 227 FGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 227 ~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 1 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V 29 (258)
T 3a28_C 1 MSKVAMVTGGAQGIGRGISEKLAADGFDI 29 (258)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHHTCEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEE
Confidence 37999999999999999999999998854
No 362
>3miz_A Putative transcriptional regulator protein, LACI family; LACL family, protein structure initiative II (PSI II), NYSGXRC, structural genomics; 1.91A {Rhizobium etli}
Probab=23.32 E-value=89 Score=28.86 Aligned_cols=64 Identities=14% Similarity=-0.030 Sum_probs=42.8
Q ss_pred CCCEEEEEEeCCC-hhhH-HHHHHHHHHHHHcCCeeeeeEEecCCcccHH-hhhccccCCCCCCccEEEEcC
Q psy4615 100 RVPTLTAILVGND-SASS-TYVNNKMKSAAKVGEVNALGVLYHLTLFGRS-KLINPMSIPISTGVSSHISQL 168 (477)
Q Consensus 100 ~~P~LaiI~vGdd-~aS~-~Yv~~k~k~a~~vGI~~~~~~~lp~~~~t~e-~~I~~L~~N~D~~V~GILVql 168 (477)
+...+++|.-.-+ +--. ..++...+.|++.|..+. ......+. ..+ +.++.+ . ...|+|||+.-
T Consensus 12 ~s~~Igvi~~~~~~~~~~~~~~~gi~~~a~~~g~~~~-~~~~~~~~-~~~~~~~~~l--~-~~~vdGiIi~~ 78 (301)
T 3miz_A 12 RSNTFGIITDYVSTTPYSVDIVRGIQDWANANGKTIL-IANTGGSS-EREVEIWKMF--Q-SHRIDGVLYVT 78 (301)
T ss_dssp CCCEEEEEESSTTTCCSCHHHHHHHHHHHHHTTCEEE-EEECTTCH-HHHHHHHHHH--H-HTTCSEEEEEE
T ss_pred CCCEEEEEeCCCcCcccHHHHHHHHHHHHHHCCCEEE-EEeCCCCh-HHHHHHHHHH--H-hCCCCEEEEec
Confidence 4567777765432 3233 678889999999999988 76655444 222 666666 3 34799999863
No 363
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=23.17 E-value=24 Score=32.36 Aligned_cols=31 Identities=32% Similarity=0.357 Sum_probs=26.2
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
+..+|.++|+|.+.-+|+-++..|+.+++.|
T Consensus 10 ~~~~k~vlITGas~giG~~ia~~l~~~G~~v 40 (256)
T 3ezl_A 10 VMSQRIAYVTGGMGGIGTSICQRLHKDGFRV 40 (256)
T ss_dssp ---CEEEEETTTTSHHHHHHHHHHHHTTEEE
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEE
Confidence 5689999999999999999999999998854
No 364
>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...
Probab=22.96 E-value=33 Score=33.35 Aligned_cols=29 Identities=21% Similarity=0.331 Sum_probs=26.1
Q ss_pred CCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 227 FGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 227 ~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
+||.++|+|.|.-+|+-++..|+.+++.|
T Consensus 1 ~~k~vlVTGas~GIG~ala~~L~~~G~~v 29 (327)
T 1jtv_A 1 ARTVVLITGCSSGIGLHLAVRLASDPSQS 29 (327)
T ss_dssp CCEEEEESCCSSHHHHHHHHHHHTCTTCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCce
Confidence 47899999999999999999999998754
No 365
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=22.73 E-value=37 Score=29.82 Aligned_cols=27 Identities=19% Similarity=0.170 Sum_probs=23.8
Q ss_pred CeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 229 KNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 229 k~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
++++|+|.+..+|+.++..|+.++.+|
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V 27 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEV 27 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEE
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEE
Confidence 368999999999999999999998754
No 366
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=21.90 E-value=38 Score=31.73 Aligned_cols=24 Identities=29% Similarity=0.493 Sum_probs=21.2
Q ss_pred eEEEECCCCCcchHHHHHhhhCCC
Q psy4615 230 NAVVCGRSKNVGMPIAMLLHADGA 253 (477)
Q Consensus 230 ~vvViGrS~~VGkPLA~lL~~~~a 253 (477)
+|+|+|.+..+|+.|+..|..+|.
T Consensus 2 kILVTGatGfIG~~L~~~L~~~G~ 25 (298)
T 4b4o_A 2 RVLVGGGTGFIGTALTQLLNARGH 25 (298)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCC
Confidence 688999999999999999988876
No 367
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=21.75 E-value=55 Score=27.50 Aligned_cols=39 Identities=18% Similarity=0.267 Sum_probs=30.6
Q ss_pred CCHHHHHHHHHHhCCCCCCCeEEEECCCCCcchHHHHHhhhCCC
Q psy4615 210 CTPLGVQELIRRYKVETFGKNAVVCGRSKNVGMPIAMLLHADGA 253 (477)
Q Consensus 210 cTa~Av~~Lle~~gi~l~Gk~vvViGrS~~VGkPLA~lL~~~~a 253 (477)
+++...+++++... |+++.|+| ...+|+.++..|..++.
T Consensus 7 sv~~~a~~~~~~~~----~~~v~iiG-~G~iG~~~a~~l~~~g~ 45 (144)
T 3oj0_A 7 SIPSIVYDIVRKNG----GNKILLVG-NGMLASEIAPYFSYPQY 45 (144)
T ss_dssp SHHHHHHHHHHHHC----CCEEEEEC-CSHHHHHHGGGCCTTTC
T ss_pred cHHHHHHHHHHhcc----CCEEEEEC-CCHHHHHHHHHHHhCCC
Confidence 45666667777664 99999999 57789999999987765
No 368
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=21.74 E-value=46 Score=31.39 Aligned_cols=30 Identities=13% Similarity=0.175 Sum_probs=25.8
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
++. |.++|+|.+.-+|+-++..|+.+|+.|
T Consensus 19 ~~~-k~vlVTGas~gIG~aia~~La~~G~~V 48 (272)
T 2nwq_A 19 HMS-STLFITGATSGFGEACARRFAEAGWSL 48 (272)
T ss_dssp --C-CEEEESSTTTSSHHHHHHHHHHTTCEE
T ss_pred CcC-cEEEEeCCCCHHHHHHHHHHHHCCCEE
Confidence 345 899999999999999999999999854
No 369
>3gbv_A Putative LACI-family transcriptional regulator; NYSGXRC, PSI-II, 11231J, structur genomics, protein structure initiative; 2.20A {Bacteroides fragilis}
Probab=21.58 E-value=1.8e+02 Score=26.47 Aligned_cols=66 Identities=3% Similarity=-0.128 Sum_probs=42.0
Q ss_pred CCCEEEEEEeC--CChhhHHHHHHHHHHHHHc-CCeeeeeEEe--cC-CcccHHhhhccccCCCCCCccEEEEcCC
Q psy4615 100 RVPTLTAILVG--NDSASSTYVNNKMKSAAKV-GEVNALGVLY--HL-TLFGRSKLINPMSIPISTGVSSHISQLP 169 (477)
Q Consensus 100 ~~P~LaiI~vG--dd~aS~~Yv~~k~k~a~~v-GI~~~~~~~l--p~-~~~t~e~~I~~L~~N~D~~V~GILVqlP 169 (477)
...++++|.-. +++--...++...+.|++. |..+. .... .. +.+.+.+.++.+ . ..+|+||++.-.
T Consensus 7 ~~~~Igvi~~~~~~~~~~~~~~~gi~~~a~~~~g~~~~-~~~~~~~~~~~~~~~~~i~~l--~-~~~vdgiii~~~ 78 (304)
T 3gbv_A 7 KKYTFACLLPKHLEGEYWTDVQKGIREAVTTYSDFNIS-ANITHYDPYDYNSFVATSQAV--I-EEQPDGVMFAPT 78 (304)
T ss_dssp CCEEEEEEEECCCTTSHHHHHHHHHHHHHHHTGGGCEE-EEEEEECSSCHHHHHHHHHHH--H-TTCCSEEEECCS
T ss_pred CcceEEEEecCCCCchHHHHHHHHHHHHHHHHHhCCeE-EEEEcCCCCCHHHHHHHHHHH--H-hcCCCEEEECCC
Confidence 45677777766 4555566678888999988 87777 5443 22 220111566665 2 357999999743
No 370
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=21.55 E-value=50 Score=30.69 Aligned_cols=27 Identities=15% Similarity=0.220 Sum_probs=20.8
Q ss_pred CCeEEEECCCCCcchHHHHHhhhCCCC
Q psy4615 228 GKNAVVCGRSKNVGMPIAMLLHADGAG 254 (477)
Q Consensus 228 Gk~vvViGrS~~VGkPLA~lL~~~~a~ 254 (477)
+++++|+|.+..+|+.++..|+.++..
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~ 28 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNP 28 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCC
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCc
Confidence 567888888888888888888776653
No 371
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=21.26 E-value=42 Score=30.18 Aligned_cols=27 Identities=22% Similarity=0.395 Sum_probs=24.1
Q ss_pred CeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 229 KNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 229 k~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
|.++|+|.+.-+|+-++..|+.+++.|
T Consensus 2 k~vlVtGasg~iG~~l~~~L~~~g~~V 28 (255)
T 2dkn_A 2 SVIAITGSASGIGAALKELLARAGHTV 28 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEE
T ss_pred cEEEEeCCCcHHHHHHHHHHHhCCCEE
Confidence 578999999999999999999998744
No 372
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=21.25 E-value=40 Score=31.35 Aligned_cols=29 Identities=24% Similarity=0.303 Sum_probs=26.7
Q ss_pred CCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 227 FGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 227 ~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
.||.++|+|.+.-+|+-++..|+.+++.|
T Consensus 25 ~~k~vlITGas~gIG~a~a~~l~~~G~~V 53 (272)
T 4e3z_A 25 DTPVVLVTGGSRGIGAAVCRLAARQGWRV 53 (272)
T ss_dssp CSCEEEETTTTSHHHHHHHHHHHHTTCEE
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEE
Confidence 58999999999999999999999999854
No 373
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=21.24 E-value=53 Score=31.21 Aligned_cols=47 Identities=21% Similarity=0.121 Sum_probs=31.7
Q ss_pred CCCCCeEEEEecCCCCCCccccc--ceeccCCCCccHhHHHHHHHHHHHHHHHHHH
Q psy4615 1 MVKPGACVIDVGITRIKCVSEVA--GYITPVPGGVGPMTVAMLMKNTILAAKHAVI 54 (477)
Q Consensus 1 ~vk~gavVIDvGin~~~~~~~~~--~~iTPVPGGVGp~T~a~L~~N~v~aa~~~~~ 54 (477)
++++|++|+|++. ......+.+ .-.+.+|| ..||+.+.+.+.+.|..
T Consensus 210 ~l~~g~~viDv~~-~~t~ll~~a~~~g~~~v~g------~~mlv~q~~~a~~~w~g 258 (275)
T 2hk9_A 210 LIKKDHVVVDIIY-KETKLLKKAKEKGAKLLDG------LPMLLWQGIEAFKIWNG 258 (275)
T ss_dssp GCCTTSEEEESSS-SCCHHHHHHHHTTCEEECS------HHHHHHHHHHHHHHHHC
T ss_pred HcCCCCEEEEcCC-ChHHHHHHHHHCcCEEECC------HHHHHHHHHHHHHHHHC
Confidence 3689999999998 322211111 12356676 78999999999888754
No 374
>2h0a_A TTHA0807, transcriptional regulator; repressor, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=21.12 E-value=1.6e+02 Score=26.49 Aligned_cols=55 Identities=9% Similarity=-0.266 Sum_probs=30.5
Q ss_pred CChhhHHHHHHHHHHHHHcCCeeeeeEEecCCcccHHhhhccccCCCCCCccEEEEcCC
Q psy4615 111 NDSASSTYVNNKMKSAAKVGEVNALGVLYHLTLFGRSKLINPMSIPISTGVSSHISQLP 169 (477)
Q Consensus 111 dd~aS~~Yv~~k~k~a~~vGI~~~~~~~lp~~~~t~e~~I~~L~~N~D~~V~GILVqlP 169 (477)
+++-.....+...+.|++.|.+.. ......+.+.+.+.++.+ . ..+|+||++.-.
T Consensus 10 ~~~~~~~~~~gi~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~l--~-~~~vdgiI~~~~ 64 (276)
T 2h0a_A 10 ATEFYRRLVEGIEGVLLEQRYDLA-LFPILSLARLKRYLENTT--L-AYLTDGLILASY 64 (276)
T ss_dssp CCHHHHHHHHHHHHHHGGGTCEEE-ECCCCSCCCCC------------CCCSEEEEESC
T ss_pred CCHHHHHHHHHHHHHHHHCCCEEE-EEeCCCchhhHHHHHHHH--H-hCCCCEEEEecC
Confidence 355555667888999999998877 544333330122567766 4 346999998643
No 375
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=21.08 E-value=45 Score=30.89 Aligned_cols=26 Identities=23% Similarity=0.397 Sum_probs=22.7
Q ss_pred CCCeEEEECCCCCcchHHHHHhhhCCC
Q psy4615 227 FGKNAVVCGRSKNVGMPIAMLLHADGA 253 (477)
Q Consensus 227 ~Gk~vvViGrS~~VGkPLA~lL~~~~a 253 (477)
.+++++|+| +..+|+.++..|..++.
T Consensus 2 ~~~~ilVtG-aG~iG~~l~~~L~~~g~ 27 (286)
T 3gpi_A 2 SLSKILIAG-CGDLGLELARRLTAQGH 27 (286)
T ss_dssp CCCCEEEEC-CSHHHHHHHHHHHHTTC
T ss_pred CCCcEEEEC-CCHHHHHHHHHHHHCCC
Confidence 468899999 78999999999988876
No 376
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=20.98 E-value=43 Score=30.22 Aligned_cols=27 Identities=30% Similarity=0.473 Sum_probs=23.9
Q ss_pred CeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 229 KNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 229 k~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
|.++|+|.+.-+|+-++..|+.+|+.|
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~~V 28 (230)
T 3guy_A 2 SLIVITGASSGLGAELAKLYDAEGKAT 28 (230)
T ss_dssp -CEEEESTTSHHHHHHHHHHHHTTCCE
T ss_pred CEEEEecCCchHHHHHHHHHHHCCCEE
Confidence 578999999999999999999999854
No 377
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=20.90 E-value=80 Score=33.06 Aligned_cols=44 Identities=32% Similarity=0.365 Sum_probs=34.0
Q ss_pred CHHHHHH-HHHHhCCCCCCCeEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 211 TPLGVQE-LIRRYKVETFGKNAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 211 Ta~Av~~-Lle~~gi~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
|...++. +.+..+..+.||+++|+|-+. +|+.+|.+|...|+.|
T Consensus 202 t~~s~~~gi~rat~~~L~GktV~ViG~G~-IGk~vA~~Lra~Ga~V 246 (435)
T 3gvp_A 202 CRESILDGLKRTTDMMFGGKQVVVCGYGE-VGKGCCAALKAMGSIV 246 (435)
T ss_dssp HHHHHHHHHHHHHCCCCTTCEEEEECCSH-HHHHHHHHHHHTTCEE
T ss_pred hHHHHHHHHHHhhCceecCCEEEEEeeCH-HHHHHHHHHHHCCCEE
Confidence 4554444 334568899999999999665 7999999999888843
No 378
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=20.76 E-value=1.6e+02 Score=26.05 Aligned_cols=68 Identities=10% Similarity=-0.132 Sum_probs=40.9
Q ss_pred CCCCEEEEEEeCCChhhHHH---------HHHHHHHHHHcCCeeeeeEEecCCcccHH--hhhccccCCCCCCccEEEEc
Q psy4615 99 HRVPTLTAILVGNDSASSTY---------VNNKMKSAAKVGEVNALGVLYHLTLFGRS--KLINPMSIPISTGVSSHISQ 167 (477)
Q Consensus 99 g~~P~LaiI~vGdd~aS~~Y---------v~~k~k~a~~vGI~~~~~~~lp~~~~t~e--~~I~~L~~N~D~~V~GILVq 167 (477)
.++++.+||.+||.-....+ -....+..++.|+++.....+|++. ++ +.+... .+..+.|-|+.-
T Consensus 13 ~~~~~v~iitvsd~~~~~~~~~g~i~D~ng~~L~~~L~~~G~~v~~~~iV~Dd~--~~i~~al~~~--~a~~~~DlVitt 88 (178)
T 3iwt_A 13 PKSLNFYVITISTSRYEKLLKKEPIVDESGDIIKQLLIENGHKIIGYSLVPDDK--IKILKAFTDA--LSIDEVDVIIST 88 (178)
T ss_dssp CCCCEEEEEEECHHHHHHHHTTCCCCCHHHHHHHHHHHHTTCEEEEEEEECSCH--HHHHHHHHHH--HTCTTCCEEEEE
T ss_pred CCCCEEEEEEEcCCCccccccCCCCCcchHHHHHHHHHHCCCEEEEEEEeCCCH--HHHHHHHHHH--HhcCCCCEEEec
Confidence 45789999999973111111 1235677889999988344456554 22 445544 344567788876
Q ss_pred CCC
Q psy4615 168 LPL 170 (477)
Q Consensus 168 lPL 170 (477)
==+
T Consensus 89 GG~ 91 (178)
T 3iwt_A 89 GGT 91 (178)
T ss_dssp SCC
T ss_pred CCc
Confidence 544
No 379
>2ioy_A Periplasmic sugar-binding protein; ribose binding protein, thermophilic proteins; HET: RIP; 1.90A {Thermoanaerobacter tengcongensis}
Probab=20.67 E-value=1.8e+02 Score=26.52 Aligned_cols=60 Identities=12% Similarity=0.032 Sum_probs=37.2
Q ss_pred EEEEEEeC-CChhhHHHHHHHHHHHHHcCCeeeeeEEecCCcccHH-hhhccccCCCCCCccEEEEc
Q psy4615 103 TLTAILVG-NDSASSTYVNNKMKSAAKVGEVNALGVLYHLTLFGRS-KLINPMSIPISTGVSSHISQ 167 (477)
Q Consensus 103 ~LaiI~vG-dd~aS~~Yv~~k~k~a~~vGI~~~~~~~lp~~~~t~e-~~I~~L~~N~D~~V~GILVq 167 (477)
++++|.-. .++--...++...+.|++.|.... ...-..+. ..+ +.++.+ - ...|||||+.
T Consensus 3 ~Igvi~~~~~~~f~~~~~~gi~~~~~~~g~~~~-~~~~~~~~-~~~~~~i~~l--~-~~~vdgiIi~ 64 (283)
T 2ioy_A 3 TIGLVISTLNNPFFVTLKNGAEEKAKELGYKII-VEDSQNDS-SKELSNVEDL--I-QQKVDVLLIN 64 (283)
T ss_dssp EEEEEESCSSSHHHHHHHHHHHHHHHHHTCEEE-EEECTTCH-HHHHHHHHHH--H-HTTCSEEEEC
T ss_pred EEEEEecCCCCHHHHHHHHHHHHHHHhcCcEEE-EecCCCCH-HHHHHHHHHH--H-HcCCCEEEEe
Confidence 35555432 234344556777889999999887 55433333 222 566666 3 4469999995
No 380
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=20.49 E-value=47 Score=32.33 Aligned_cols=29 Identities=24% Similarity=0.242 Sum_probs=26.1
Q ss_pred CCCCCeEEEECCCCCcchHHHHHhhhCC-C
Q psy4615 225 ETFGKNAVVCGRSKNVGMPIAMLLHADG-A 253 (477)
Q Consensus 225 ~l~Gk~vvViGrS~~VGkPLA~lL~~~~-a 253 (477)
.++|++++|+|.+..+|+-++..|..++ .
T Consensus 29 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~ 58 (377)
T 2q1s_A 29 KLANTNVMVVGGAGFVGSNLVKRLLELGVN 58 (377)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHTTCS
T ss_pred HhCCCEEEEECCccHHHHHHHHHHHHcCCc
Confidence 4678999999999999999999998888 5
No 381
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=20.38 E-value=44 Score=29.54 Aligned_cols=26 Identities=23% Similarity=0.281 Sum_probs=23.6
Q ss_pred eEEEECCCCCcchHHHHHhhhCCCCc
Q psy4615 230 NAVVCGRSKNVGMPIAMLLHADGAGV 255 (477)
Q Consensus 230 ~vvViGrS~~VGkPLA~lL~~~~a~v 255 (477)
+++|+|.+..+|+.++..|+.++..|
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V 27 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEV 27 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEE
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEE
Confidence 68999999999999999999998754
No 382
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=20.35 E-value=48 Score=31.35 Aligned_cols=125 Identities=12% Similarity=0.165 Sum_probs=64.9
Q ss_pred CCCCCCeEEEECCCCCcchHHHHHhhhCCCCccccceEEccCCCCCChhHHHHHHHHHHHHHHHHhhhccCCCchhhHhh
Q psy4615 224 VETFGKNAVVCGRSKNVGMPIAMLLHADGAGVSEVAGYITPVPGGVGPMTVAMLMKNTILAAKHAVIYNISKSNVVDDMV 303 (477)
Q Consensus 224 i~l~Gk~vvViGrS~~VGkPLA~lL~~~~a~v~~~a~~iTPVpGGVGp~T~a~L~~N~l~a~~~~~sk~iSK~~v~~~~~ 303 (477)
++++||+|+|+| ..-||.-.+..|...++.|. .+.|- ..+- +..+. +...-..+.+.--.+++-
T Consensus 27 l~L~gk~VLVVG-gG~va~~ka~~Ll~~GA~Vt----Vvap~---~~~~-----l~~l~---~~~~i~~i~~~~~~~dL~ 90 (223)
T 3dfz_A 27 LDLKGRSVLVVG-GGTIATRRIKGFLQEGAAIT----VVAPT---VSAE-----INEWE---AKGQLRVKRKKVGEEDLL 90 (223)
T ss_dssp ECCTTCCEEEEC-CSHHHHHHHHHHGGGCCCEE----EECSS---CCHH-----HHHHH---HTTSCEEECSCCCGGGSS
T ss_pred EEcCCCEEEEEC-CCHHHHHHHHHHHHCCCEEE----EECCC---CCHH-----HHHHH---HcCCcEEEECCCCHhHhC
Confidence 488999999999 55679999999999998653 33442 1111 01111 110001111211112211
Q ss_pred hcccccCCCCCCCC----------ceeEEEeecCCCCccccccccceeeeeccceeEEeecccccchhhhhHHHHH
Q psy4615 304 ASNSILYRPGEKPD----------HTVVIKYVPYVGDSKRALDEYTSEILLGGHNTISMHNTCEDSLLASPLILDL 369 (477)
Q Consensus 304 ~~~~~ly~~~~~~~----------h~v~I~Y~p~~Gd~K~a~d~~~~~~flG~~~~i~~~~~c~DSlLAaPLilDL 369 (477)
+ ....+..+..+. ..+-+ -+-|++..=|.|.--.+=-+..+|.++..+..-.||.=|-=.|
T Consensus 91 ~-adLVIaAT~d~~~N~~I~~~ak~gi~V----NvvD~p~~~~f~~Paiv~rg~l~iaIST~G~sP~la~~iR~~i 161 (223)
T 3dfz_A 91 N-VFFIVVATNDQAVNKFVKQHIKNDQLV----NMASSFSDGNIQIPAQFSRGRLSLAISTDGASPLLTKRIKEDL 161 (223)
T ss_dssp S-CSEEEECCCCTHHHHHHHHHSCTTCEE----EC-----CCSEECCEEEEETTEEEEEECTTSCHHHHHHHHHHH
T ss_pred C-CCEEEECCCCHHHHHHHHHHHhCCCEE----EEeCCcccCeEEEeeEEEeCCEEEEEECCCCCcHHHHHHHHHH
Confidence 1 111111111110 01111 3556677777777777778899999999998888887654443
No 383
>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2
Probab=20.30 E-value=45 Score=31.98 Aligned_cols=26 Identities=27% Similarity=0.326 Sum_probs=22.4
Q ss_pred CCeEEEECCCCCcchHHHHHhhhCCC
Q psy4615 228 GKNAVVCGRSKNVGMPIAMLLHADGA 253 (477)
Q Consensus 228 Gk~vvViGrS~~VGkPLA~lL~~~~a 253 (477)
+|+++|+|.+..+|+-++..|+.++.
T Consensus 1 m~~vlVtGatG~iG~~l~~~L~~~g~ 26 (372)
T 1db3_A 1 SKVALITGVTGQDGSYLAEFLLEKGY 26 (372)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC
Confidence 47889999999999999999888776
No 384
>3brs_A Periplasmic binding protein/LACI transcriptional; structural genomics, protein structure initiative; 2.00A {Clostridium phytofermentans}
Probab=20.24 E-value=1.2e+02 Score=27.55 Aligned_cols=64 Identities=9% Similarity=-0.175 Sum_probs=40.0
Q ss_pred CCEEEEEEeCC---ChhhHHHHHHHHHHHHHcCCeeeeeEEec--CCcccHH-hhhccccCCCCCCccEEEEcCC
Q psy4615 101 VPTLTAILVGN---DSASSTYVNNKMKSAAKVGEVNALGVLYH--LTLFGRS-KLINPMSIPISTGVSSHISQLP 169 (477)
Q Consensus 101 ~P~LaiI~vGd---d~aS~~Yv~~k~k~a~~vGI~~~~~~~lp--~~~~t~e-~~I~~L~~N~D~~V~GILVqlP 169 (477)
..++++|.-.- ++--...++...+.|++.|.++. ..... .+. .++ +.++.+ .. .+|+|||+.-.
T Consensus 5 ~~~Ig~v~~~~~~~~~~~~~~~~gi~~~a~~~g~~~~-~~~~~~~~~~-~~~~~~~~~l--~~-~~vdgii~~~~ 74 (289)
T 3brs_A 5 QYYMICIPKVLDDSSDFWSVLVEGAQMAAKEYEIKLE-FMAPEKEEDY-LVQNELIEEA--IK-RKPDVILLAAA 74 (289)
T ss_dssp CCEEEEECSCCCSSSHHHHHHHHHHHHHHHHHTCEEE-ECCCSSTTCH-HHHHHHHHHH--HH-TCCSEEEECCS
T ss_pred CcEEEEEeCCCCCCchHHHHHHHHHHHHHHHcCCEEE-EecCCCCCCH-HHHHHHHHHH--HH-hCCCEEEEeCC
Confidence 45677765432 44445567788899999998877 54432 222 122 667766 33 46999999644
No 385
>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A
Probab=20.10 E-value=6.3e+02 Score=24.83 Aligned_cols=130 Identities=11% Similarity=0.015 Sum_probs=76.7
Q ss_pred EEEEEEeCCChhhHHHHHHHHHHHHHcCCeeeeeEEecCCc-----ccHHhhhccccCCCCCCccEEEEcCCCCCCCcHH
Q psy4615 103 TLTAILVGNDSASSTYVNNKMKSAAKVGEVNALGVLYHLTL-----FGRSKLINPMSIPISTGVSSHISQLPLPEHMVER 177 (477)
Q Consensus 103 ~LaiI~vGdd~aS~~Yv~~k~k~a~~vGI~~~~~~~lp~~~-----~t~e~~I~~L~~N~D~~V~GILVqlPLP~~ld~~ 177 (477)
.++.|..- | |..---+=..++.++|.++. .+.-+.++ |+.++.++-| +. -+|+|++-.|- |-...
T Consensus 42 ~la~lF~e--~-STRTR~SFe~A~~~LGg~~i-~l~~~~~ss~~kgEsl~DTarvl--s~--~~D~iviR~~~--~~~~~ 111 (306)
T 4ekn_B 42 ILATVFYE--P-STRTRLSFETAMKRLGGEVI-TMTDLKSSSVAKGESLIDTIRVI--SG--YADIIVLRHPS--EGAAR 111 (306)
T ss_dssp EEEEEESS--C-CHHHHHHHHHHHHHTTCEEE-EECCCTTTTSSSSCCHHHHHHHH--HH--HCSEEEEECSS--TTHHH
T ss_pred eEEEEEcC--C-ChhHHhhHHHHHHHcCCEEE-EcCCcccccCCCCCCHHHHHHHH--HH--hCcEEEEEcCC--hHHHH
Confidence 45555543 2 33333345789999999877 44321222 0111333333 21 15899998664 33344
Q ss_pred HHHhhcCCCCCCCCCCccchHHhhcCC-CCcccCCHHH-HHHHHHHhCCCCCCCeEEEECCC--CCcchHHHHHhhhC-C
Q psy4615 178 AVCNAVAPHKDVDGFNIVNVGRFCLDL-KTLIPCTPLG-VQELIRRYKVETFGKNAVVCGRS--KNVGMPIAMLLHAD-G 252 (477)
Q Consensus 178 ~l~~aI~p~KDVDGl~p~nlg~l~~g~-~~f~PcTa~A-v~~Lle~~gi~l~Gk~vvViGrS--~~VGkPLA~lL~~~-~ 252 (477)
.+.+.. +.+-+|. |. ..+.||-+.| ++.+.|+.| .++|.+++++|-. ..|..-+...+..- |
T Consensus 112 ~lA~~~-------~vPVINa-----g~g~~~HPtQ~LaDl~Ti~e~~g-~l~glkva~vGD~~~~rva~Sl~~~~~~~~G 178 (306)
T 4ekn_B 112 LASEYS-------QVPIINA-----GDGSNQHPTQTLLDLYTIMREIG-RIDGIKIAFVGDLKYGRTVHSLVYALSLFEN 178 (306)
T ss_dssp HHHHHC-------SSCEEES-----CSSSSCCHHHHHHHHHHHHHHHS-CSTTCEEEEESCTTTCHHHHHHHHHHHTSSS
T ss_pred HHHHhC-------CCCEEeC-----CCCCCcCcHHHHHHHHHHHHHhC-CcCCCEEEEEcCCCCCcHHHHHHHHHHhcCC
Confidence 444332 2444553 33 4688998887 678888887 7999999999964 34666666666665 6
Q ss_pred CCc
Q psy4615 253 AGV 255 (477)
Q Consensus 253 a~v 255 (477)
+++
T Consensus 179 ~~v 181 (306)
T 4ekn_B 179 VEM 181 (306)
T ss_dssp CEE
T ss_pred CEE
Confidence 643
No 386
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=20.07 E-value=36 Score=32.37 Aligned_cols=27 Identities=15% Similarity=0.151 Sum_probs=23.6
Q ss_pred CCCCeEEEECCCCCcchHHHHHhhhCC
Q psy4615 226 TFGKNAVVCGRSKNVGMPIAMLLHADG 252 (477)
Q Consensus 226 l~Gk~vvViGrS~~VGkPLA~lL~~~~ 252 (477)
..+++++|+|.+..+|+.++..|+.++
T Consensus 22 ~~~~~vlVtGatG~iG~~l~~~L~~~g 48 (346)
T 4egb_A 22 SNAMNILVTGGAGFIGSNFVHYMLQSY 48 (346)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHHHC
T ss_pred cCCCeEEEECCccHHHHHHHHHHHhhC
Confidence 468999999999999999999998887
Done!