Query psy4616
Match_columns 321
No_of_seqs 109 out of 133
Neff 3.7
Searched_HMMs 29240
Date Fri Aug 16 21:26:38 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4616.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/4616hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1s1d_A Apyrase; adpase, five-b 100.0 7E-112 2E-116 807.1 28.3 250 71-321 3-331 (331)
2 3qqz_A Putative uncharacterize 93.8 0.78 2.7E-05 41.6 12.3 53 260-320 171-231 (255)
3 2w2x_D 1-phosphatidylinositol- 64.3 4.5 0.00015 31.9 3.0 30 199-230 16-45 (124)
4 2xzm_Z RPS21E; ribosome, trans 61.5 3.2 0.00011 33.8 1.6 31 217-261 27-57 (97)
5 3u5c_V S26, YS25, 40S ribosoma 60.7 3.6 0.00012 32.9 1.8 31 217-261 12-42 (87)
6 2da0_A 130-kDa phosphatidylino 60.6 2.6 8.9E-05 32.3 0.9 38 199-237 14-52 (114)
7 2dkp_A Pleckstrin homology dom 54.8 13 0.00043 28.4 4.0 78 199-285 25-105 (128)
8 2d9y_A Pleckstrin homology dom 48.5 19 0.00066 26.8 4.0 33 199-232 15-48 (117)
9 2d9v_A Pleckstrin homology dom 44.2 7.8 0.00027 30.5 1.3 42 192-233 4-46 (130)
10 2i5f_A Pleckstrin; PH domain, 44.2 37 0.0013 24.8 5.0 23 199-221 11-33 (109)
11 1fgy_A GRP1; PH domain, signal 43.4 27 0.00092 26.3 4.2 22 199-220 9-30 (127)
12 2dn6_A KIAA0640 protein; PH do 42.3 15 0.00052 27.3 2.6 22 199-220 12-33 (115)
13 3bk5_A Putative outer membrane 41.7 1.6E+02 0.0054 25.1 9.3 105 197-306 69-198 (237)
14 1v89_A Hypothetical protein KI 41.0 47 0.0016 24.5 5.2 23 199-221 12-34 (118)
15 1btn_A Beta-spectrin; signal t 38.5 25 0.00085 25.6 3.2 33 199-232 3-43 (106)
16 1pls_A Pleckstrin homology dom 37.3 22 0.00074 26.6 2.8 23 198-220 8-30 (113)
17 2d9x_A Oxysterol binding prote 36.2 21 0.00071 27.3 2.5 41 192-232 4-46 (120)
18 2yry_A Pleckstrin homology dom 34.6 22 0.00076 26.7 2.4 31 199-230 26-57 (122)
19 2rsg_A Collagen type IV alpha- 33.1 26 0.0009 25.3 2.6 38 199-237 5-42 (94)
20 1x05_A Pleckstrin; PH domain, 32.0 63 0.0022 24.5 4.7 22 199-220 22-43 (129)
21 1u5d_A SKAP55, SRC kinase-asso 31.8 64 0.0022 23.2 4.5 20 199-218 7-30 (108)
22 1wi1_A Calcium-dependent activ 30.0 22 0.00075 29.6 1.8 78 199-286 12-97 (126)
23 2cod_A Centaurin-delta 1; ARF 30.0 29 0.00098 26.0 2.4 21 199-219 12-33 (115)
24 3hpa_A Amidohydrolase; signatu 29.8 62 0.0021 28.8 4.9 29 275-306 58-87 (479)
25 1fao_A Dual adaptor of phospho 26.6 36 0.0012 25.8 2.4 22 199-220 22-43 (126)
26 1wgq_A FYVE, rhogef and PH dom 26.2 42 0.0014 24.9 2.7 23 198-220 11-33 (109)
27 3aj4_A Pleckstrin homology dom 25.9 40 0.0014 25.0 2.5 20 199-218 9-28 (112)
28 1v5u_A SBF1, SET binding facto 25.7 35 0.0012 25.3 2.2 22 199-220 12-33 (117)
29 1x1f_A Signal-transducing adap 25.6 1.1E+02 0.0036 25.4 5.3 34 199-233 22-55 (149)
30 1upq_A PEPP1; PH domain, phosp 25.2 1E+02 0.0034 23.0 4.7 20 199-218 15-35 (123)
31 1ms9_A Trans-sialidase; trans- 24.0 3.4E+02 0.012 28.1 9.7 70 111-196 142-230 (648)
32 2y7b_A Actin-binding protein a 23.8 46 0.0016 25.4 2.6 33 199-232 9-43 (134)
33 1unq_A RAC-alpha serine/threon 22.8 37 0.0013 25.8 1.8 39 199-237 12-51 (125)
34 1v88_A Oxysterol binding prote 21.3 46 0.0016 26.7 2.2 27 192-219 4-31 (130)
35 4ejn_A RAC-alpha serine/threon 21.2 38 0.0013 31.4 1.9 20 199-218 10-29 (446)
36 1eaz_A Tandem PH domain contai 21.0 42 0.0014 25.2 1.8 21 199-219 18-38 (125)
37 4a42_A GH89_CBM32-4, alpha-N-a 20.9 1.6E+02 0.0054 23.8 5.4 60 100-163 87-149 (149)
38 3rcp_A Pleckstrin homology dom 20.8 43 0.0015 24.4 1.8 33 199-232 3-35 (103)
39 3nok_A Glutaminyl cyclase; bet 20.7 2.3E+02 0.008 26.0 7.1 70 119-190 146-220 (268)
40 1xv2_A ALDC, hypothetical prot 20.5 78 0.0027 28.8 3.8 87 157-262 48-137 (237)
41 1u5f_A SRC-associated adaptor 20.5 1.4E+02 0.0048 23.4 4.9 79 199-286 21-106 (148)
42 1v5p_A Pleckstrin homology dom 20.4 41 0.0014 26.8 1.7 31 199-229 19-52 (126)
43 3mtw_A L-arginine carboxypepti 20.3 69 0.0024 26.5 3.1 50 250-306 3-58 (403)
No 1
>1s1d_A Apyrase; adpase, five-blade beta propeller, calcium-binding protein, nucleotide-binding motif, hydrolase; HET: GP2; 1.60A {Homo sapiens} SCOP: b.67.3.1 PDB: 1s18_A* 2h2n_A 2h2u_A
Probab=100.00 E-value=7e-112 Score=807.05 Aligned_cols=250 Identities=54% Similarity=0.982 Sum_probs=234.0
Q ss_pred CCcceeeecccccccccCCCCCCceecCCceEEEEEE----------e-CCceEEEEEEeEEEEcCCCCeEEEEecCCCC
Q psy4616 71 ESNIYLKSLGKGLMYNNTYPLTPPVQTAQGIQYRIAP----------D-NKSWLSYFKKGYLLWNPTFDQISIIWDSEKP 139 (321)
Q Consensus 71 ~~~~~~~~~~~~~~yN~tYPlt~p~~~~~g~~yriai----------~-~~~w~S~lk~G~L~~~~~~~~~sv~wd~~~~ 139 (321)
..++|.........||+|||||+|+++++|.+||||| + +++|+||+++|+|++++++++|+|+|++ ++
T Consensus 3 ~~~~~~~~~~~~~~yn~typl~~p~~~~~~~~~~iaiIaDLD~~Sk~~~~~~w~S~~~~G~L~~~~~~~~~si~w~~-~~ 81 (331)
T 1s1d_A 3 NAHNWRLGQAPANWYNDTYPLSPPQRTPAGIRYRIAVIADLDTESRAQEENTWFSYLKKGYLTLSDSGDKVAVEWDK-DH 81 (331)
T ss_dssp ------------CCCCCCCSSSCCEEETTEEEEEEEEEEECGGGGBCSSTTCEEEEEEEEEEEEETTSSCEEEEECS-SC
T ss_pred cccchhhcccccccccCCCCCCCcccCCCCcEEEEEEEecCchhccccCCCcEEEEEEEEEEEECCCCCeEEEEEcC-Cc
Confidence 4578888888888899999999999999999999999 1 6899999999999999998999999998 78
Q ss_pred eeEEecCCCCCccceeeceeeeCCEEEeecCCceeEEEEecCeEeeEEEEeCCCCCCcc---------------------
Q psy4616 140 TVLKSGYGLNGRGMELSELVVFDGKLLTVDDRTGIVYIVENNMVIPWVVLMDGNGQSPK--------------------- 198 (321)
Q Consensus 140 ~~l~S~~~~kGRGMELSELvvFngkLys~DDRTGiVyeI~~~~~iPwvIL~dGdG~~~k--------------------- 198 (321)
.+|+|++|++|||||||||++||||||+|||||||||||+++++||||||+||||+++|
T Consensus 82 ~~l~S~~~~~GRGmELSELv~FngkLyt~DDRTGiVyei~~~~~iPwvIL~dGdG~~~kGfK~EWaTVKd~~LyVGs~GK 161 (331)
T 1s1d_A 82 GVLESHLAEKGRGMELSDLIVFNGKLYSVDDRTGVVYQIEGSKAVPWVILSDGDGTVEKGFKAEWLAVKDERLYVGGLGK 161 (331)
T ss_dssp EEEEESCCBTTBCCCEEEEEEETTEEEEEETTTCEEEEEETTEEEEEEECEETTTTEEEECCCCEEEEETTEEEEECCCS
T ss_pred eEEEeccccCCCCceeehheeECCEEeeeeCCCceEEEEeCCcEEEEEEEecCCCCcCcccceeeEEEECCEEEEeecCc
Confidence 99999999999999999999999999999999999999999999999999999999998
Q ss_pred -----------------------------------------------ceEEEeeccccccccceeeeccccCccCCcchh
Q psy4616 199 -----------------------------------------------GYMIHESGVWSEYHQRWFFLPRRSSHFKYDEVT 231 (321)
Q Consensus 199 -----------------------------------------------GYmiHEav~WS~~~k~WfFLPRR~S~e~Yde~~ 231 (321)
||||||||+||+.||+|||||||||+|+|||+.
T Consensus 162 Ewtt~~G~~~n~n~~wVk~I~~~G~V~~~dW~~~Y~~lr~A~gi~~PGYmiHEav~WS~~~~kW~FLPRr~S~e~Yde~~ 241 (331)
T 1s1d_A 162 EWTTTTGDVVNENPEWVKVVGYKGSVDHENWVSNYNALRAAAGIQPPGYLIHESACWSDTLQRWFFLPRRASQERYSEKD 241 (331)
T ss_dssp CEECTTCCEEECGGGEEEEECTTCCEEEEECHHHHHHHHHHTTCCTTCEEECCCEEEETTTTEEEECCSEEESSCCCHHH
T ss_pred eeEcCCCcEecCCCeEEEEECCCCcEEEechHHHHHHHHHHcCCCCCceEEEEeEeeccccCEEEEeccccCcCcccchh
Confidence 999999999999999999999999999999999
Q ss_pred hhhcccceEEEecCCCCceEEEEeCCcCCCccceeeeEcCCCCCeEEEEEeeeecCCeeeEEEEEEeeCceEeecccccC
Q psy4616 232 DERMATNVLLSTDSNFTNVMVTYIGEVIPTHGYSSFKFLPGTKDRVIVALKSEEDKGRTATYITAFTLAGTILVPETKIA 311 (321)
Q Consensus 232 DE~rG~N~li~adedF~~i~v~~Ig~~~P~~GFSSFKFvPgT~D~iIvALKSeE~~g~~aTyItvF~i~G~iLLpet~I~ 311 (321)
||+||||+||+|||||++|+|++||+.+|+||||||||||+|+|+|||||||+|.+|+++|||||||++|+||||||+|+
T Consensus 242 DE~~G~N~li~a~edF~~i~v~~i~~~~p~~GFSSFKFiP~t~D~iIvALKs~E~~~~~~Tyitvf~i~G~vLl~e~~I~ 321 (331)
T 1s1d_A 242 DERKGANLLLSASPDFGDIAVSHVGAVVPTHGFSSFKFIPNTDDQIIVALKSEEDSGRVASYIMAFTLDGRFLLPETKIG 321 (331)
T ss_dssp HTTCBCCEEEEECTTSSCEEEEECSCCCTTEEEEEEEECTTSTTCEEEEEEEEEETTEEEEEEEEEETTCCEEEEEEEEE
T ss_pred hhhcCccEEEEecCCcceeEEEEcCCCCCccceeeeEEeCCCCCeEEEEEEEEEcCCceeEEEEEEEeCCeEEccccCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeeeeeeC
Q psy4616 312 DYKYEGLEFI 321 (321)
Q Consensus 312 ~~KyEGieFi 321 (321)
++||||||||
T Consensus 322 ~~KyEGieFi 331 (331)
T 1s1d_A 322 SVKYEGIEFI 331 (331)
T ss_dssp SSEEEEEEEC
T ss_pred CcceeeEEEC
Confidence 9999999997
No 2
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=93.80 E-value=0.78 Score=41.65 Aligned_cols=53 Identities=17% Similarity=0.246 Sum_probs=34.7
Q ss_pred CCccceeeeEcCCCCCeEEEEEeeeecCCeeeEEEEEEeeCceEeecccccCc--------eeeeeeee
Q psy4616 260 PTHGYSSFKFLPGTKDRVIVALKSEEDKGRTATYITAFTLAGTILVPETKIAD--------YKYEGLEF 320 (321)
Q Consensus 260 P~~GFSSFKFvPgT~D~iIvALKSeE~~g~~aTyItvF~i~G~iLLpet~I~~--------~KyEGieF 320 (321)
..+.+|+..|-|.|+. +.+|-.+. --+.++|.+|+++---..-.+ -.-|||.|
T Consensus 171 ~~~d~S~l~~dp~tg~--lliLS~~s------~~L~~~d~~g~~~~~~~L~~g~~~l~~~~~qpEGia~ 231 (255)
T 3qqz_A 171 TLDDVSGAEFNQQKNT--LLVLSHES------RALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAM 231 (255)
T ss_dssp CSSCCCEEEEETTTTE--EEEEETTT------TEEEEECTTCCEEEEEECSTTGGGCSSCCCSEEEEEE
T ss_pred ccCCceeEEEcCCCCe--EEEEECCC------CeEEEEcCCCCEEEEEEcCCccCCcccccCCCCeeEE
Confidence 4678999999999863 45554332 457789999986532211122 37799987
No 3
>2w2x_D 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma-2; hydrolase, phospholipase C, phosphoinositides, RHO gtpases, RAC, SH2 domain; HET: GSP; 2.30A {Homo sapiens} PDB: 2w2w_A* 2w2x_C* 2k2j_A
Probab=64.27 E-value=4.5 Score=31.90 Aligned_cols=30 Identities=3% Similarity=0.222 Sum_probs=23.4
Q ss_pred ceEEEeeccccccccceeeeccccCccCCcch
Q psy4616 199 GYMIHESGVWSEYHQRWFFLPRRSSHFKYDEV 230 (321)
Q Consensus 199 GYmiHEav~WS~~~k~WfFLPRR~S~e~Yde~ 230 (321)
|||.........+++|||.|= -...-|-+.
T Consensus 16 G~L~K~g~~~k~Wk~RwfVL~--~~~L~yyk~ 45 (124)
T 2w2x_D 16 GELYMWDSIDQKWTRHFCAIA--DAKLSFSDD 45 (124)
T ss_dssp EEEEEEETTTTEEEEEEEEEE--TTEEEEEEE
T ss_pred EEEEEECCCCCCceEeEEEEE--CCEEEEEcc
Confidence 999998878889999999994 344555554
No 4
>2xzm_Z RPS21E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_Z
Probab=61.50 E-value=3.2 Score=33.83 Aligned_cols=31 Identities=29% Similarity=0.499 Sum_probs=21.5
Q ss_pred eeccccCccCCcchhhhhcccceEEEecCCCCceEEEEeCCcCCC
Q psy4616 217 FLPRRSSHFKYDEVTDERMATNVLLSTDSNFTNVMVTYIGEVIPT 261 (321)
Q Consensus 217 FLPRR~S~e~Yde~~DE~rG~N~li~adedF~~i~v~~Ig~~~P~ 261 (321)
.+||||| .||-||.|.++ .+|+. .|+.+||.
T Consensus 27 YiPRKCS------------aTNRiI~AKDH-aSVQI-nIa~vd~~ 57 (97)
T 2xzm_Z 27 YLPRKCD------------WSNKLIFSNDQ-SSVQI-AIAEVGEN 57 (97)
T ss_dssp SCCCBCT------------TTCCBCCSSCT-TCEEE-EEEEECSS
T ss_pred ecccccc------------ccCCccccCCc-eeEEE-EhhhcCcc
Confidence 4899999 68999997654 45543 45556665
No 5
>3u5c_V S26, YS25, 40S ribosomal protein S21-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_T 3u5g_V
Probab=60.66 E-value=3.6 Score=32.90 Aligned_cols=31 Identities=29% Similarity=0.557 Sum_probs=22.5
Q ss_pred eeccccCccCCcchhhhhcccceEEEecCCCCceEEEEeCCcCCC
Q psy4616 217 FLPRRSSHFKYDEVTDERMATNVLLSTDSNFTNVMVTYIGEVIPT 261 (321)
Q Consensus 217 FLPRR~S~e~Yde~~DE~rG~N~li~adedF~~i~v~~Ig~~~P~ 261 (321)
.+||||| .||-||.|.+ -.+|++ .|+.+|+.
T Consensus 12 YiPRKCS------------aTNriI~AKD-HaSVQI-ni~~vd~~ 42 (87)
T 3u5c_V 12 YVPRKCS------------ATNRIIKADD-HASVQI-NVAKVDEE 42 (87)
T ss_dssp CCCCCCT------------TTCCCCCTTC-TTCEEE-EEECCCSS
T ss_pred Ecccccc------------ccCCceecCC-cceEEE-eeeeECCc
Confidence 4799999 5899998654 455653 46777776
No 6
>2da0_A 130-kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; PH domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=60.58 E-value=2.6 Score=32.30 Aligned_cols=38 Identities=13% Similarity=0.204 Sum_probs=25.6
Q ss_pred ceEEEeeccc-cccccceeeeccccCccCCcchhhhhccc
Q psy4616 199 GYMIHESGVW-SEYHQRWFFLPRRSSHFKYDEVTDERMAT 237 (321)
Q Consensus 199 GYmiHEav~W-S~~~k~WfFLPRR~S~e~Yde~~DE~rG~ 237 (321)
|||....... ..+++|||.| +...-.-|.+..++..|.
T Consensus 14 G~L~K~~~~~~k~WkkR~fvL-~~~~L~yyk~~~~~~~~~ 52 (114)
T 2da0_A 14 GYLLKKSDGIRKVWQRRKCSV-KNGILTISHATSNRQPAK 52 (114)
T ss_dssp EEEEEECSSSCCCEEEEEEEE-ETTEEEECCSSCCSCCEE
T ss_pred EEEEEeCCCCCCCceeEEEEE-eCCEEEEEcCCCCCCCCE
Confidence 9999886544 7889999999 444444565554444443
No 7
>2dkp_A Pleckstrin homology domain-containing family A member 5; PH domain, pleckstrin homology domain-containing protein family A member 5; NMR {Homo sapiens}
Probab=54.83 E-value=13 Score=28.37 Aligned_cols=78 Identities=14% Similarity=0.296 Sum_probs=39.7
Q ss_pred ceEEEeec-cccccccceeeeccccCccCCcchhhh-hcccceEEEecCCCCceEEEEeCCcC-CCccceeeeEcCCCCC
Q psy4616 199 GYMIHESG-VWSEYHQRWFFLPRRSSHFKYDEVTDE-RMATNVLLSTDSNFTNVMVTYIGEVI-PTHGYSSFKFLPGTKD 275 (321)
Q Consensus 199 GYmiHEav-~WS~~~k~WfFLPRR~S~e~Yde~~DE-~rG~N~li~adedF~~i~v~~Ig~~~-P~~GFSSFKFvPgT~D 275 (321)
|||..... ....+++|||.| +...-.-|....|+ .+|+ -+..++.|..+...+ ..+.| .|+.+.....
T Consensus 25 G~L~K~~~~~~~~Wk~R~fvL-~~~~L~yy~~~~~~~~~g~-------i~L~~~~v~~~~~~~~~~~~~-~F~i~~~~~r 95 (128)
T 2dkp_A 25 GWLYKQDSTGMKLWKKRWFVL-SDLCLFYYRDEKEEGILGS-------ILLPSFQIALLTSEDHINRKY-AFKAAHPNMR 95 (128)
T ss_dssp EEEEEECCSSSCCEEEEEEEE-ETTEEEEESSTTCCSEEEE-------ECGGGSEEEECCGGGCCSSCS-EEEEECSSSC
T ss_pred EEEEEeCCCCCCCceeEEEEE-eCCEEEEECCCCCcccceE-------EEcCceEEEEcCCcccCCCCe-EEEEEcCCCC
Confidence 99988765 567789999999 33333344433332 2221 233445554444222 12222 4555543334
Q ss_pred eEEEEEeeee
Q psy4616 276 RVIVALKSEE 285 (321)
Q Consensus 276 ~iIvALKSeE 285 (321)
.+.++-.|+|
T Consensus 96 ~~~l~a~s~~ 105 (128)
T 2dkp_A 96 TYYFCTDTGK 105 (128)
T ss_dssp CEEEECSSHH
T ss_pred EEEEEcCCHH
Confidence 4455544444
No 8
>2d9y_A Pleckstrin homology domain-containing protein family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=48.45 E-value=19 Score=26.78 Aligned_cols=33 Identities=21% Similarity=0.642 Sum_probs=21.7
Q ss_pred ceEEEee-ccccccccceeeeccccCccCCcchhh
Q psy4616 199 GYMIHES-GVWSEYHQRWFFLPRRSSHFKYDEVTD 232 (321)
Q Consensus 199 GYmiHEa-v~WS~~~k~WfFLPRR~S~e~Yde~~D 232 (321)
|||..-. -....+++|||.| +...-.-|....|
T Consensus 15 G~L~K~~~~~~~~Wk~R~fvL-~~~~L~yy~~~~~ 48 (117)
T 2d9y_A 15 GWLFKQASSGVKQWNKRWFVL-VDRCLFYYKDEKE 48 (117)
T ss_dssp EEEEEECTTSSSCEEEEEEEE-ETTEEEEESSTTC
T ss_pred EEEEEeCCCCCCCceEEEEEE-CCCEEEEECCCCC
Confidence 9998876 3567789999999 3333334444333
No 9
>2d9v_A Pleckstrin homology domain-containing protein family B member 1; PH domain, phret1, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=44.25 E-value=7.8 Score=30.50 Aligned_cols=42 Identities=19% Similarity=0.417 Sum_probs=28.8
Q ss_pred CCCCCcc-ceEEEeeccccccccceeeeccccCccCCcchhhh
Q psy4616 192 GNGQSPK-GYMIHESGVWSEYHQRWFFLPRRSSHFKYDEVTDE 233 (321)
Q Consensus 192 GdG~~~k-GYmiHEav~WS~~~k~WfFLPRR~S~e~Yde~~DE 233 (321)
|.+...+ |||...+.....+++|||.|-+...-.-|.+..|+
T Consensus 4 ~~~~v~~~G~L~K~g~~~k~WkkRwFVL~~~~~L~Yyk~~~~~ 46 (130)
T 2d9v_A 4 GSSGLVRGGWLWRQSSILRRWKRNWFALWLDGTLGYYHDETAQ 46 (130)
T ss_dssp SCCCEEEEEEEEEECSSSCCEEEEEEEEETTTEEEEESSSSTT
T ss_pred CCCceeEEEEEEeecCccCCceeeEEEEccCCEEEEEeCCCCC
Confidence 3344333 99999887788899999999544444456555544
No 10
>2i5f_A Pleckstrin; PH domain, protein-inositol phosphate complex, lipid binding protein; HET: 5IP; 1.35A {Homo sapiens} SCOP: b.55.1.1 PDB: 2i5c_A* 1zm0_A
Probab=44.20 E-value=37 Score=24.82 Aligned_cols=23 Identities=17% Similarity=0.378 Sum_probs=19.5
Q ss_pred ceEEEeeccccccccceeeeccc
Q psy4616 199 GYMIHESGVWSEYHQRWFFLPRR 221 (321)
Q Consensus 199 GYmiHEav~WS~~~k~WfFLPRR 221 (321)
|||...+.....+++|||.|-..
T Consensus 11 G~L~K~g~~~~~Wk~R~fvL~~~ 33 (109)
T 2i5f_A 11 GCLLKQGHRRKNWKVRKFILRED 33 (109)
T ss_dssp EEEEEECTTTCCEEEEEEEEETT
T ss_pred EEEEEcCCCCCCceEEEEEEeCC
Confidence 99998887778899999999653
No 11
>1fgy_A GRP1; PH domain, signaling protein; HET: 4IP; 1.50A {Mus musculus} SCOP: b.55.1.1 PDB: 1fgz_A 1u2b_A 1fhw_A* 1fhx_A* 1u29_A* 1u27_A*
Probab=43.38 E-value=27 Score=26.27 Aligned_cols=22 Identities=27% Similarity=0.809 Sum_probs=18.5
Q ss_pred ceEEEeeccccccccceeeecc
Q psy4616 199 GYMIHESGVWSEYHQRWFFLPR 220 (321)
Q Consensus 199 GYmiHEav~WS~~~k~WfFLPR 220 (321)
|||.........+++|||.|-.
T Consensus 9 G~L~K~g~~~~~Wk~R~fvL~~ 30 (127)
T 1fgy_A 9 GWLLKLGGRVKTWKRRWFILTD 30 (127)
T ss_dssp EEEEEECSSSCCEEEEEEEEET
T ss_pred eEEEEECCCCCCeEEEEEEEEC
Confidence 9998887777788999999953
No 12
>2dn6_A KIAA0640 protein; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=42.35 E-value=15 Score=27.27 Aligned_cols=22 Identities=32% Similarity=0.809 Sum_probs=19.6
Q ss_pred ceEEEeeccccccccceeeecc
Q psy4616 199 GYMIHESGVWSEYHQRWFFLPR 220 (321)
Q Consensus 199 GYmiHEav~WS~~~k~WfFLPR 220 (321)
|||.........+++|||.|-.
T Consensus 12 G~L~K~~~~~~~Wk~R~fvL~~ 33 (115)
T 2dn6_A 12 GYMMKKGHRRKNWTERWFVLKP 33 (115)
T ss_dssp EEEEEECTTSSCEEEEEEEECS
T ss_pred EEEEecCCCCCCcEEeEEEEEC
Confidence 9999988788889999999965
No 13
>3bk5_A Putative outer membrane lipoprotein-sorting prote; putative outer membrane protein domain, PSI-2, protein struc initiative; HET: MSE; 2.00A {Vibrio parahaemolyticus rimd 2210633}
Probab=41.72 E-value=1.6e+02 Score=25.08 Aligned_cols=105 Identities=15% Similarity=0.203 Sum_probs=51.5
Q ss_pred ccceEEEeeccccccccceeeec-----cccCccCCcchhhhhcccc---------------eEEEecCCCC--ceEEEE
Q psy4616 197 PKGYMIHESGVWSEYHQRWFFLP-----RRSSHFKYDEVTDERMATN---------------VLLSTDSNFT--NVMVTY 254 (321)
Q Consensus 197 ~kGYmiHEav~WS~~~k~WfFLP-----RR~S~e~Yde~~DE~rG~N---------------~li~adedF~--~i~v~~ 254 (321)
..+++.||-.. +-...|.++| ||.+...+ .+...|++ .-+...+... .+.|++
T Consensus 69 G~~~L~~~~~~--~~~~~w~y~P~~~rv~ri~~~~~---~~~~~~s~~~~~d~~~~~~~~y~~~l~g~~~~~g~~~~vl~ 143 (237)
T 3bk5_A 69 GTAFLNHSHTI--GADDQWLYLPALKRVKRISSRNK---SGPFMGSEFAYEDLSSFEIEKYRFNHLKDEKFNGQDVFVLE 143 (237)
T ss_dssp TCEEEEECCSS--SCCEEEEEETTTTEEEECCGGGT---TSBSTTSSCBGGGGSCCCGGGEEEEEEEEEEETTEEEEEEE
T ss_pred CcEEEEEEcCC--CCccceeEccccCceEEcCcccc---CCCccccccChhHhhcccccccceEEeeeeEECCeeEEEEE
Confidence 34677777665 6667888877 33332222 12233433 2222233222 333454
Q ss_pred eCCcCCCccceeeeEcCCCCCeEEEEEeeeecCCee---eEEEEEEeeCceEeec
Q psy4616 255 IGEVIPTHGYSSFKFLPGTKDRVIVALKSEEDKGRT---ATYITAFTLAGTILVP 306 (321)
Q Consensus 255 Ig~~~P~~GFSSFKFvPgT~D~iIvALKSeE~~g~~---aTyItvF~i~G~iLLp 306 (321)
+-+.++.++|+..++-=..++-.++.+..-..+|+. .++...-..+|++..|
T Consensus 144 ~~pk~~~~~y~k~~~wiD~~t~~~~k~~~~d~~G~l~~~~~~~~~~~~~g~~~~~ 198 (237)
T 3bk5_A 144 QIPTDKNSGYTKQVVWLDKAHYRPLKVEFYDRKGALLKTLTFANYKQYLDKYWRA 198 (237)
T ss_dssp EEESCTTSSEEEEEEEEETTTCCEEEEEEEETTSCEEEEEEEEEEEEETTTEEEE
T ss_pred EEECCCCCCceEEEEEEECCCCeEEEEEEEcCCCCEEEEEEEeeeEEEcceEEEE
Confidence 444555567876665555555555555444445542 3333333336644443
No 14
>1v89_A Hypothetical protein KIAA0053; pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=40.96 E-value=47 Score=24.46 Aligned_cols=23 Identities=22% Similarity=0.628 Sum_probs=19.1
Q ss_pred ceEEEeeccccccccceeeeccc
Q psy4616 199 GYMIHESGVWSEYHQRWFFLPRR 221 (321)
Q Consensus 199 GYmiHEav~WS~~~k~WfFLPRR 221 (321)
|||.........+++|||.|-..
T Consensus 12 G~L~K~g~~~~~Wk~R~fvL~~~ 34 (118)
T 1v89_A 12 GWLKKQRSIVKNWQQRYFVLRAQ 34 (118)
T ss_dssp EEEEEECSSSSCEEEEEEEEETT
T ss_pred EEEEecCCCCCCccEEEEEEECC
Confidence 99988877777889999999653
No 15
>1btn_A Beta-spectrin; signal transduction protein; HET: I3P; 2.00A {Mus musculus} SCOP: b.55.1.1 PDB: 1mph_A
Probab=38.47 E-value=25 Score=25.65 Aligned_cols=33 Identities=9% Similarity=0.266 Sum_probs=21.3
Q ss_pred ceEEEee--------ccccccccceeeeccccCccCCcchhh
Q psy4616 199 GYMIHES--------GVWSEYHQRWFFLPRRSSHFKYDEVTD 232 (321)
Q Consensus 199 GYmiHEa--------v~WS~~~k~WfFLPRR~S~e~Yde~~D 232 (321)
|||.... ..-...+++||.|- ...---|.+..|
T Consensus 3 G~L~kk~~~~~~gk~~~~~~Wk~rwfvL~-~~~L~yyk~~~~ 43 (106)
T 1btn_A 3 GFLNRKHEWEAHNKKASSRSWHNVYCVIN-NQEMGFYKDAKS 43 (106)
T ss_dssp EEEEEEEEECSTTCBCSCCCCEEEEEEEE-TTEEEEESSHHH
T ss_pred cEEEEEEEEeCCCccCCCCChhEEEEEEE-CCEEEEEeCCcc
Confidence 7777665 56677899999993 333334554444
No 16
>1pls_A Pleckstrin homology domain; phosphorylation; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=37.33 E-value=22 Score=26.56 Aligned_cols=23 Identities=22% Similarity=0.742 Sum_probs=19.2
Q ss_pred cceEEEeeccccccccceeeecc
Q psy4616 198 KGYMIHESGVWSEYHQRWFFLPR 220 (321)
Q Consensus 198 kGYmiHEav~WS~~~k~WfFLPR 220 (321)
.|||.........+++|||.|-.
T Consensus 8 ~G~L~K~g~~~~~Wk~R~fvL~~ 30 (113)
T 1pls_A 8 EGYLVKKGSVFNTWKPMWVVLLE 30 (113)
T ss_dssp EEEEEEESSSSSCCEEEEEEEET
T ss_pred EEEEEEeCCCCCCceEEEEEEEC
Confidence 39999887777888999999954
No 17
>2d9x_A Oxysterol binding protein-related protein 11; PH domain, OSBP-related protein 11, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=36.21 E-value=21 Score=27.30 Aligned_cols=41 Identities=15% Similarity=0.309 Sum_probs=27.5
Q ss_pred CCCCCcc-ceEEEeeccccccccceeeecc-ccCccCCcchhh
Q psy4616 192 GNGQSPK-GYMIHESGVWSEYHQRWFFLPR-RSSHFKYDEVTD 232 (321)
Q Consensus 192 GdG~~~k-GYmiHEav~WS~~~k~WfFLPR-R~S~e~Yde~~D 232 (321)
|++...+ |||...+.....+++|||.|-. ...-.-|.+..|
T Consensus 4 ~~~~~~~~G~L~K~~~~~~~Wk~R~fvL~~~~~~L~Yyk~~~~ 46 (120)
T 2d9x_A 4 GSSGENVYGYLMKYTNLVTGWQYRFFVLNNEAGLLEYFVNEQS 46 (120)
T ss_dssp CCSCCCCEEEEEEEEETTTEEEEEEEEECTTTCEEEEESSGGG
T ss_pred CCCCCcEEEEEEecCCCCCCceEEEEEEECCCCEEEEEecCcc
Confidence 3444433 9999988777889999999954 233334544444
No 18
>2yry_A Pleckstrin homology domain-containing family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=34.59 E-value=22 Score=26.72 Aligned_cols=31 Identities=23% Similarity=0.653 Sum_probs=20.1
Q ss_pred ceEEEee-ccccccccceeeeccccCccCCcch
Q psy4616 199 GYMIHES-GVWSEYHQRWFFLPRRSSHFKYDEV 230 (321)
Q Consensus 199 GYmiHEa-v~WS~~~k~WfFLPRR~S~e~Yde~ 230 (321)
|||..-. -....+++|||.| +...-.-|...
T Consensus 26 G~L~K~~~~~~~~Wk~R~fvL-~~~~L~yy~~~ 57 (122)
T 2yry_A 26 GWLFKQASSGVKQWNKRWFVL-VDRCLFYYKDE 57 (122)
T ss_dssp EEEEEECCSSSCCEEEEEEEE-ETTEEEEESST
T ss_pred EEEEEECCCCCCCcEEEEEEE-eCCEEEEECCC
Confidence 9998765 3567789999999 33333344333
No 19
>2rsg_A Collagen type IV alpha-3-binding protein; pleckstrin homology, lipid transport; NMR {Homo sapiens}
Probab=33.10 E-value=26 Score=25.34 Aligned_cols=38 Identities=13% Similarity=0.303 Sum_probs=25.2
Q ss_pred ceEEEeeccccccccceeeeccccCccCCcchhhhhccc
Q psy4616 199 GYMIHESGVWSEYHQRWFFLPRRSSHFKYDEVTDERMAT 237 (321)
Q Consensus 199 GYmiHEav~WS~~~k~WfFLPRR~S~e~Yde~~DE~rG~ 237 (321)
|||.-..-.....++|||.|= ...-.-|....|...+.
T Consensus 5 G~L~K~g~~~k~WkkR~FvL~-~~~L~Yy~~~~~~~~~~ 42 (94)
T 2rsg_A 5 GVLSKWTNYIHGWQDRWVVLK-NNALSYYKSEDETEYGC 42 (94)
T ss_dssp EEEEEESSSTTCEEEEEEEEE-TTEEEEESSTTGGGTCC
T ss_pred EEEEEeCCCCCCceEEEEEEE-CCEEEEEEecccccccc
Confidence 999988888888999999992 22222444444444333
No 20
>1x05_A Pleckstrin; PH domain, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.55.1.1 PDB: 1xx0_A
Probab=31.96 E-value=63 Score=24.51 Aligned_cols=22 Identities=18% Similarity=0.400 Sum_probs=18.9
Q ss_pred ceEEEeeccccccccceeeecc
Q psy4616 199 GYMIHESGVWSEYHQRWFFLPR 220 (321)
Q Consensus 199 GYmiHEav~WS~~~k~WfFLPR 220 (321)
|||.........+++|||.|-.
T Consensus 22 G~L~K~g~~~~~Wk~R~fvL~~ 43 (129)
T 1x05_A 22 GCLLKQGHRRKNWKVRKFILRE 43 (129)
T ss_dssp EEEEECCSSCCCCEEEEEEEEE
T ss_pred EEEEecCCCCCCCeeEEEEEeC
Confidence 9999887777788999999954
No 21
>1u5d_A SKAP55, SRC kinase-associated phosphoprotein of 55 kDa; PH domain, signaling protein; 1.70A {Homo sapiens} SCOP: b.55.1.1
Probab=31.78 E-value=64 Score=23.21 Aligned_cols=20 Identities=35% Similarity=0.772 Sum_probs=15.5
Q ss_pred ceEEEeeccc----cccccceeee
Q psy4616 199 GYMIHESGVW----SEYHQRWFFL 218 (321)
Q Consensus 199 GYmiHEav~W----S~~~k~WfFL 218 (321)
|||..-+..- ..+++|||.|
T Consensus 7 G~L~K~~~~~~~~~~~Wk~R~fvL 30 (108)
T 1u5d_A 7 GYLEKKSKDHSFFGSEWQKRWCVV 30 (108)
T ss_dssp EEEEEEEECSSSSCEEEEEEEEEE
T ss_pred EEEEEcCCCCCccccCceeeEEEE
Confidence 8888765432 7788999999
No 22
>1wi1_A Calcium-dependent activator protein for secretion, CAPS; PH domain, PIP2 binding site, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=29.97 E-value=22 Score=29.61 Aligned_cols=78 Identities=26% Similarity=0.331 Sum_probs=43.2
Q ss_pred ceEEEeec-cccccccceeeeccccCccCC------cchhhhhcccceEEEecCCCCceEEEEeCC-cCCCccceeeeEc
Q psy4616 199 GYMIHESG-VWSEYHQRWFFLPRRSSHFKY------DEVTDERMATNVLLSTDSNFTNVMVTYIGE-VIPTHGYSSFKFL 270 (321)
Q Consensus 199 GYmiHEav-~WS~~~k~WfFLPRR~S~e~Y------de~~DE~rG~N~li~adedF~~i~v~~Ig~-~~P~~GFSSFKFv 270 (321)
|||..... .|-.+++|||.|=-. ..-| ++...|-.|+=.| ...+|-.+.. .+-..+-=+|+.+
T Consensus 12 G~L~KqG~~~~K~WKrRwFVL~~~--~LyYfk~~~~~~~~~~p~G~I~L-------~g~tV~~~~~~~~~~~~k~~F~~v 82 (126)
T 1wi1_A 12 GYLWAIGKNVWKRWKKRFFVLVQV--SQYTFAMCSYREKKAEPQELLQL-------DGYTVDYTDPQPGLEGGRAFFNAV 82 (126)
T ss_dssp EEEEEECSSSCCSCEEEEEEEEEE--ETTEEEEEECCSSSSCCSEEEEC-------SSCEEEECCCCSSCCSCSSEEEEE
T ss_pred EEEEEeCCCcccccceEEEEEeCC--EEEEEEcccccccCCCCceEEEC-------CCcEEEEecCCcccccCceEEEEe
Confidence 99999854 788999999998644 2333 5666666664211 1123322211 1111122266666
Q ss_pred CCCCCeEEEEEeeeec
Q psy4616 271 PGTKDRVIVALKSEED 286 (321)
Q Consensus 271 PgT~D~iIvALKSeE~ 286 (321)
+. .+..++|--|+|+
T Consensus 83 ~~-~~ty~~~Adseee 97 (126)
T 1wi1_A 83 KE-GDTVIFASDDEQD 97 (126)
T ss_dssp CS-SCEEEEECSSHHH
T ss_pred cC-CceEEEEcCCHHH
Confidence 54 4467666666553
No 23
>2cod_A Centaurin-delta 1; ARF GAP and RHO GAP with ankyrin repeat and PH domains (ARAP) 2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=29.97 E-value=29 Score=26.05 Aligned_cols=21 Identities=19% Similarity=0.381 Sum_probs=18.1
Q ss_pred ceEEEeec-cccccccceeeec
Q psy4616 199 GYMIHESG-VWSEYHQRWFFLP 219 (321)
Q Consensus 199 GYmiHEav-~WS~~~k~WfFLP 219 (321)
|||..... ....+++|||.|-
T Consensus 12 G~L~K~~~~~~~~WkkR~fvL~ 33 (115)
T 2cod_A 12 GWLDKLSPQGKRMFQKRWVKFD 33 (115)
T ss_dssp EEEEECCSSSSSCCEEEEEEEC
T ss_pred EEEEEcCCCCCCCCceEEEEEE
Confidence 99998876 6778899999995
No 24
>3hpa_A Amidohydrolase; signature of Zn ligands, structural genomics, NYSGXRC, target 9236E, PSI-2, protein structure initiative; 2.20A {Unidentified}
Probab=29.81 E-value=62 Score=28.76 Aligned_cols=29 Identities=28% Similarity=0.379 Sum_probs=18.2
Q ss_pred CeEEEEEee-eecCCeeeEEEEEEeeCceEeec
Q psy4616 275 DRVIVALKS-EEDKGRTATYITAFTLAGTILVP 306 (321)
Q Consensus 275 D~iIvALKS-eE~~g~~aTyItvF~i~G~iLLp 306 (321)
|..|+|+=+ .|.... .-.++|..|+++||
T Consensus 58 dgrI~aVG~~~~~~~~---~~~vIDa~G~~v~P 87 (479)
T 3hpa_A 58 DNRIVAVGPSAELPET---ADEVLDLRGHLVIP 87 (479)
T ss_dssp TTEEEEEEEGGGSCSC---CSEEEECTTEEEEE
T ss_pred CCEEEEEeCCccCCCC---CCeEEECCCCEEee
Confidence 345677733 332221 12479999999999
No 25
>1fao_A Dual adaptor of phosphotyrosine and 3- phosphoinositides; pleckstrin, inositol tetrakisphosphate signal transduction protein, adaptor protein; HET: 4IP; 1.80A {Homo sapiens} SCOP: b.55.1.1 PDB: 1fb8_A
Probab=26.58 E-value=36 Score=25.83 Aligned_cols=22 Identities=36% Similarity=0.925 Sum_probs=19.1
Q ss_pred ceEEEeeccccccccceeeecc
Q psy4616 199 GYMIHESGVWSEYHQRWFFLPR 220 (321)
Q Consensus 199 GYmiHEav~WS~~~k~WfFLPR 220 (321)
|||.........+++|||.|-.
T Consensus 22 G~L~K~g~~~~~Wk~R~fvL~~ 43 (126)
T 1fao_A 22 GYLTKQGGLVKTWKTRWFTLHR 43 (126)
T ss_dssp EEEEEECSSSCCEEEEEEEEET
T ss_pred EEEEEcCCCCCCcccEEEEEEC
Confidence 9999988778889999999943
No 26
>1wgq_A FYVE, rhogef and PH domain containing 6; ethanol decreased 4; pleckstrin homoloy domain, signal transduction, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=26.24 E-value=42 Score=24.85 Aligned_cols=23 Identities=22% Similarity=0.677 Sum_probs=19.8
Q ss_pred cceEEEeeccccccccceeeecc
Q psy4616 198 KGYMIHESGVWSEYHQRWFFLPR 220 (321)
Q Consensus 198 kGYmiHEav~WS~~~k~WfFLPR 220 (321)
.|||.........+++|||.|-.
T Consensus 11 ~G~L~K~~~~~~~Wk~RwfvL~~ 33 (109)
T 1wgq_A 11 SGYLYRSKGSKKPWKHLWFVIKN 33 (109)
T ss_dssp EEEEEEESSTTSCCEEEEEEEET
T ss_pred EEEEEeCCCCCCCceeEEEEEeC
Confidence 39999988778889999999964
No 27
>3aj4_A Pleckstrin homology domain-containing family B ME; antiparallel beta sheet, protein transport; HET: SEP EDO; 1.00A {Homo sapiens} PDB: 3via_A 2dhi_A
Probab=25.91 E-value=40 Score=24.99 Aligned_cols=20 Identities=25% Similarity=0.830 Sum_probs=18.3
Q ss_pred ceEEEeeccccccccceeee
Q psy4616 199 GYMIHESGVWSEYHQRWFFL 218 (321)
Q Consensus 199 GYmiHEav~WS~~~k~WfFL 218 (321)
|||...+.....+++|||.|
T Consensus 9 G~L~K~g~~~k~WkkR~fvL 28 (112)
T 3aj4_A 9 GWLLRQSTILKRWKKNWFDL 28 (112)
T ss_dssp EEEEEECSSSCCEEEEEEEE
T ss_pred EEEEeeCCCCCCeeceEEEE
Confidence 99999887888899999999
No 28
>1v5u_A SBF1, SET binding factor 1; MTMR5, the pleckstrin homology domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.55.1.1
Probab=25.66 E-value=35 Score=25.27 Aligned_cols=22 Identities=23% Similarity=0.696 Sum_probs=19.1
Q ss_pred ceEEEeeccccccccceeeecc
Q psy4616 199 GYMIHESGVWSEYHQRWFFLPR 220 (321)
Q Consensus 199 GYmiHEav~WS~~~k~WfFLPR 220 (321)
|||.........+++|||.|-.
T Consensus 12 G~L~K~g~~~~~Wk~R~fvL~~ 33 (117)
T 1v5u_A 12 GILYKKGAFMKPWKARWFVLDK 33 (117)
T ss_dssp EEEEECCCSSSCCEEEEEEEET
T ss_pred EEEEecCCCCCCceeeEEEEEC
Confidence 9999987778889999999953
No 29
>1x1f_A Signal-transducing adaptor protein 1; docking protein BRDG1, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=25.63 E-value=1.1e+02 Score=25.40 Aligned_cols=34 Identities=24% Similarity=0.546 Sum_probs=25.2
Q ss_pred ceEEEeeccccccccceeeeccccCccCCcchhhh
Q psy4616 199 GYMIHESGVWSEYHQRWFFLPRRSSHFKYDEVTDE 233 (321)
Q Consensus 199 GYmiHEav~WS~~~k~WfFLPRR~S~e~Yde~~DE 233 (321)
|||.......-.+++|||.| |...---|.+..|+
T Consensus 22 G~L~Kkg~~~k~WkrRWFvL-k~~~L~Yyk~~~d~ 55 (149)
T 1x1f_A 22 GFLLIKRSGYREYEHYWTEL-RGTTLFFYTDKKSI 55 (149)
T ss_dssp EEEEEECTTCCSCEEEEEEE-ETTEEEEESCSSCS
T ss_pred EEEEEeCCCCCCceeEEEEE-cCCEEEEEeCCCcc
Confidence 99999888889999999999 33333345555554
No 30
>1upq_A PEPP1; PH domain, phosphoinositide binding, signal transduction; 1.48A {Homo sapiens} SCOP: b.55.1.1 PDB: 1upr_A*
Probab=25.24 E-value=1e+02 Score=23.01 Aligned_cols=20 Identities=25% Similarity=0.729 Sum_probs=16.5
Q ss_pred ceEEEeec-cccccccceeee
Q psy4616 199 GYMIHESG-VWSEYHQRWFFL 218 (321)
Q Consensus 199 GYmiHEav-~WS~~~k~WfFL 218 (321)
|||..... ....++++||.|
T Consensus 15 G~L~K~~~~~~~~WkkR~fvL 35 (123)
T 1upq_A 15 GWLHKQDSSGLRLWKRRWFVL 35 (123)
T ss_dssp EEEEEECSSSSCCEEEEEEEE
T ss_pred EEEEeeCCCCCCCceeEEEEE
Confidence 99987753 567789999999
No 31
>1ms9_A Trans-sialidase; trans-glycosylation, protein-acrbohydrate interac beta-propeller, hydrolase; HET: LAT; 1.58A {Trypanosoma cruzi} SCOP: b.29.1.15 b.68.1.1 PDB: 1ms0_A* 1mr5_A* 1ms1_A 1ms4_A 1ms8_A* 1ms3_A* 2ah2_A* 3b69_A* 3opz_A 3pjq_A* 1s0i_A* 1s0j_A* 1ms5_A 1wcs_A 2ags_A* 2a75_A* 2fhr_A* 1n1t_A* 1n1s_A* 1n1v_A* ...
Probab=23.95 E-value=3.4e+02 Score=28.10 Aligned_cols=70 Identities=26% Similarity=0.440 Sum_probs=42.6
Q ss_pred ceEEEEEEeEEEEcCCCCe--EEEEecCCCCeeEEecC-------------CCCCccceeeceeeeCCEEEeecCCceeE
Q psy4616 111 SWLSYFKKGYLLWNPTFDQ--ISIIWDSEKPTVLKSGY-------------GLNGRGMELSELVVFDGKLLTVDDRTGIV 175 (321)
Q Consensus 111 ~w~S~lk~G~L~~~~~~~~--~sv~wd~~~~~~l~S~~-------------~~kGRGMELSELvvFngkLys~DDRTGiV 175 (321)
.|.-.+.+|.++.+.++++ -.|+|.+ +..|...+ .-.|+|+-|. ||+|+
T Consensus 142 ~~~llLVkG~V~~S~D~Gktsk~ItWs~--p~~L~~~~~~~~~~~~~~~~~~GgGsGI~m~-----dGtLV--------- 205 (648)
T 1ms9_A 142 DWDILLAVGEVTKSTAGGKITASIKWGS--PVSLKEFFPAEMEGMHTNQFLGGAGVAIVAS-----NGNLV--------- 205 (648)
T ss_dssp TEEEEEEEEEEEEECGGGSCEEEEEECC--CEECGGGCCSBSSSSBEEEEEECSEECEECT-----TSCEE---------
T ss_pred CcceEEEEeeeccccccccccceeeccC--cccCccccccccccceeEEEEecCCceEEec-----CCcEE---------
Confidence 6777788999988754333 5789985 55554433 2345555554 45544
Q ss_pred EEE----ecCeEeeEEEEeCCCCCC
Q psy4616 176 YIV----ENNMVIPWVVLMDGNGQS 196 (321)
Q Consensus 176 yeI----~~~~~iPwvIL~dGdG~~ 196 (321)
|-+ .+++.+..+|.+|.+|.+
T Consensus 206 fPv~~~~~~g~~~s~iiySdD~G~T 230 (648)
T 1ms9_A 206 YPVQVTNKKKQVFSKIFYSEDEGKT 230 (648)
T ss_dssp EEEEEEETTCCEEEEEEEESSTTSS
T ss_pred EEEEEEcccccceeeEEEecCCCCC
Confidence 333 244566777888877764
No 32
>2y7b_A Actin-binding protein anillin; cell cycle; 1.90A {Homo sapiens}
Probab=23.83 E-value=46 Score=25.41 Aligned_cols=33 Identities=18% Similarity=0.392 Sum_probs=22.3
Q ss_pred ceEEEe--eccccccccceeeeccccCccCCcchhh
Q psy4616 199 GYMIHE--SGVWSEYHQRWFFLPRRSSHFKYDEVTD 232 (321)
Q Consensus 199 GYmiHE--av~WS~~~k~WfFLPRR~S~e~Yde~~D 232 (321)
|||... .......++|||.|-.. .-.-|....|
T Consensus 9 G~L~K~~~~~~~~~WkrRwfvL~~~-~L~yyk~~~d 43 (134)
T 2y7b_A 9 GFLTIFEDVSGFGAWHRRWCVLSGN-CISYWTYPDD 43 (134)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEETT-EEEEESSHHH
T ss_pred eeEEEEcCCCCCCCcEEEEEEEECC-EEEEECCCCc
Confidence 999865 66667889999999432 3334544444
No 33
>1unq_A RAC-alpha serine/threonine kinase; transferase, pleckstrin homology domain, PKB, AKT, phosphoinositide, serine/threonine-protein kinase; HET: 4IP; 0.98A {Homo sapiens} SCOP: b.55.1.1 PDB: 1h10_A* 1unr_A 2uzs_A* 2uzr_A 2uvm_A* 1unp_A 2x18_A* 1p6s_A
Probab=22.83 E-value=37 Score=25.82 Aligned_cols=39 Identities=15% Similarity=0.372 Sum_probs=25.7
Q ss_pred ceEEEeeccccccccceeeeccccCccCCcchhh-hhccc
Q psy4616 199 GYMIHESGVWSEYHQRWFFLPRRSSHFKYDEVTD-ERMAT 237 (321)
Q Consensus 199 GYmiHEav~WS~~~k~WfFLPRR~S~e~Yde~~D-E~rG~ 237 (321)
|||...+.....+++|||.|=....-.-|.+..| +.+|+
T Consensus 12 G~L~K~g~~~k~WkkRwfvL~~~~~L~yy~~~~~~~~~g~ 51 (125)
T 1unq_A 12 GWLHKRGEYIKTWRPRYFLLKNDGTFIGYKERPQDVDQRE 51 (125)
T ss_dssp EEEEEECSSSCCEEEEEEEEETTSEEEEESSCCCSHHHHT
T ss_pred eeEEeccCCccCccCcEEEEecCCEEEEEeCCCCCCCCce
Confidence 9999888778888999999953322234544433 33444
No 34
>1v88_A Oxysterol binding protein-related protein 8; vesicle transport, pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=21.30 E-value=46 Score=26.71 Aligned_cols=27 Identities=11% Similarity=0.310 Sum_probs=20.5
Q ss_pred CCCCCcc-ceEEEeeccccccccceeeec
Q psy4616 192 GNGQSPK-GYMIHESGVWSEYHQRWFFLP 219 (321)
Q Consensus 192 GdG~~~k-GYmiHEav~WS~~~k~WfFLP 219 (321)
+++...+ |||.... ..-.+++|||.|-
T Consensus 4 ~~~~v~k~GwL~K~g-~~k~WkrRWfVLk 31 (130)
T 1v88_A 4 GSSGIVMADWLKIRG-TLKSWTKLWCVLK 31 (130)
T ss_dssp SSSSCCEEEEEEECC-SSSSCEEEEEEEE
T ss_pred CCCceEEEeEEEEeC-CCCCceEEEEEEE
Confidence 3444444 9998877 7788999999994
No 35
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=21.25 E-value=38 Score=31.37 Aligned_cols=20 Identities=20% Similarity=0.589 Sum_probs=19.6
Q ss_pred ceEEEeeccccccccceeee
Q psy4616 199 GYMIHESGVWSEYHQRWFFL 218 (321)
Q Consensus 199 GYmiHEav~WS~~~k~WfFL 218 (321)
|||.+....|..+++|||.|
T Consensus 10 G~L~K~g~~~k~Wk~r~fvL 29 (446)
T 4ejn_A 10 GWLHKRGEYIKTWRPRYFLL 29 (446)
T ss_dssp EEEEEEETTTTEEEEEEEEE
T ss_pred eeEEeeccccccccceEEEE
Confidence 99999999999999999999
No 36
>1eaz_A Tandem PH domain containing protein-1; lipid-binding protein, lipid degradation, phosphatidylinositol (3, 4)-bisphosphate, signalling; HET: CIT; 1.40A {Homo sapiens} SCOP: b.55.1.1
Probab=20.98 E-value=42 Score=25.15 Aligned_cols=21 Identities=29% Similarity=0.729 Sum_probs=18.4
Q ss_pred ceEEEeeccccccccceeeec
Q psy4616 199 GYMIHESGVWSEYHQRWFFLP 219 (321)
Q Consensus 199 GYmiHEav~WS~~~k~WfFLP 219 (321)
|||.........+++|||.|=
T Consensus 18 G~L~K~g~~~~~Wk~R~fvL~ 38 (125)
T 1eaz_A 18 GYCVKQGAVMKNWKRRYFQLD 38 (125)
T ss_dssp EEEEEECTTTCCEEEEEEEEC
T ss_pred EEEEEeCCCCCCcceEEEEEe
Confidence 999998777778899999993
No 37
>4a42_A GH89_CBM32-4, alpha-N-acetylglucosaminidase family protein; hydrolase, family 89 glycoside hydrolase, family 32 carbohyd binding module; HET: MSE; 1.55A {Clostridium perfringens}
Probab=20.88 E-value=1.6e+02 Score=23.79 Aligned_cols=60 Identities=15% Similarity=0.303 Sum_probs=35.2
Q ss_pred ceEEEEEE--eCCceEEEEEEeEEEEcCCCCeEEEEecCC-CCeeEEecCCCCCccceeeceeeeCC
Q psy4616 100 GIQYRIAP--DNKSWLSYFKKGYLLWNPTFDQISIIWDSE-KPTVLKSGYGLNGRGMELSELVVFDG 163 (321)
Q Consensus 100 g~~yriai--~~~~w~S~lk~G~L~~~~~~~~~sv~wd~~-~~~~l~S~~~~kGRGMELSELvvFng 163 (321)
...|+|-+ |+.+|..+...|... .......+.++.. ...-+.=.+. +...-|+||-+|+|
T Consensus 87 v~~y~I~~S~DG~~W~~~~~~g~~~--~~~~~~~~~f~~pv~aRYVRi~~~--~~~~si~E~~Vy~g 149 (149)
T 4a42_A 87 PLKYSIEISNDGTEWTKIVDENNNE--ENKAVYSNILKSGKIGRFVRFNFN--SENVKIGEIKIYKG 149 (149)
T ss_dssp CCCEEEEEESSSSSCEEEEEETTCC--CCCSEEEEECCTTCEEEEEEEEEC--SSSCCEEEEEEEEC
T ss_pred cEEEEEEEEcCCCeEeEeEEcceeC--CCCceEEEEcCCCceEEEEEEEEe--cCCcEEEEEEEECC
Confidence 34788888 478999988777532 2234455666531 1111111111 11788999999987
No 38
>3rcp_A Pleckstrin homology domain-containing family A ME; FAPP1, PH domain, lipid-binding, membrane, membrane protein; 1.90A {Homo sapiens} PDB: 2kcj_A
Probab=20.83 E-value=43 Score=24.42 Aligned_cols=33 Identities=24% Similarity=0.477 Sum_probs=22.4
Q ss_pred ceEEEeeccccccccceeeeccccCccCCcchhh
Q psy4616 199 GYMIHESGVWSEYHQRWFFLPRRSSHFKYDEVTD 232 (321)
Q Consensus 199 GYmiHEav~WS~~~k~WfFLPRR~S~e~Yde~~D 232 (321)
|||.-.+......++|||.|- ...-.-|....|
T Consensus 3 G~L~K~g~~~k~Wk~R~fvL~-~~~L~Yy~~~~~ 35 (103)
T 3rcp_A 3 GVLYKWTNYLTGWQPRWFVLD-NGILSYYDSQDD 35 (103)
T ss_dssp EEEEEECCTTTCEEEEEEEEE-TTEEEEESSCC-
T ss_pred eEEEEccCCCCCeeceEEEEE-CCEEEEEecCCc
Confidence 788888777778899999995 333334454444
No 39
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=20.67 E-value=2.3e+02 Score=26.02 Aligned_cols=70 Identities=13% Similarity=0.115 Sum_probs=45.0
Q ss_pred eEEEEcCCCCeEEEEecCCCCeeEEecCCC--CCccc-eeeceeeeCCEEEeecCCceeEEEE--ecCeEeeEEEEe
Q psy4616 119 GYLLWNPTFDQISIIWDSEKPTVLKSGYGL--NGRGM-ELSELVVFDGKLLTVDDRTGIVYIV--ENNMVIPWVVLM 190 (321)
Q Consensus 119 G~L~~~~~~~~~sv~wd~~~~~~l~S~~~~--kGRGM-ELSELvvFngkLys~DDRTGiVyeI--~~~~~iPwvIL~ 190 (321)
+.|..+...+++. .+|. +...+...+.- .|+.+ -|.||.+-+|+||.-+=.+..|..| +.++++=|+=|+
T Consensus 146 ~~L~vSdGs~~l~-~iDp-~T~~v~~~I~V~~~g~~v~~lNeLe~~dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~ 220 (268)
T 3nok_A 146 GKLVRSDGGTMLT-FHEP-DGFALVGAVQVKLRGQPVELINELECANGVIYANIWHSSDVLEIDPATGTVVGVIDAS 220 (268)
T ss_dssp TEEEEECSSSEEE-EECT-TTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTCSEEEEECTTTCBEEEEEECH
T ss_pred CEEEEECCCCEEE-EEcC-CCCeEEEEEEeCCCCcccccccccEEeCCEEEEEECCCCeEEEEeCCCCcEEEEEECC
Confidence 3555555444444 4565 44455555544 44444 3578888899999877788899999 456777777665
No 40
>1xv2_A ALDC, hypothetical protein, similar to alpha- acetolactate decarboxylase; structural genomics, MCSG; 2.00A {Staphylococcus aureus subsp} SCOP: d.290.1.1
Probab=20.54 E-value=78 Score=28.85 Aligned_cols=87 Identities=15% Similarity=0.321 Sum_probs=61.0
Q ss_pred ceeeeCCEEEeecCCceeEEEEecCeEeeEEEEeCCCCCCccceEEEeeccccccccceeeeccccCccCCcchhhhhcc
Q psy4616 157 ELVVFDGKLLTVDDRTGIVYIVENNMVIPWVVLMDGNGQSPKGYMIHESGVWSEYHQRWFFLPRRSSHFKYDEVTDERMA 236 (321)
Q Consensus 157 ELvvFngkLys~DDRTGiVyeI~~~~~iPwvIL~dGdG~~~kGYmiHEav~WS~~~k~WfFLPRR~S~e~Yde~~DE~rG 236 (321)
||+++||+.|-+.. .|.|.++.++...|...... |.+.. =+=+|...+.+...+..|+...
T Consensus 48 EmiilDG~~Yq~~~-dG~v~~~~~~~~tPFA~Vt~----------------f~p~~--~~~~~~~~~~~~l~~~i~~~~s 108 (237)
T 1xv2_A 48 EVIFLDGKAYHANE-HKEFIELKGDEKVPYASITN----------------FKASK--TFPLQQLSQDDVFAQIKNEMLS 108 (237)
T ss_dssp EEEEETTEEEEECT-TSCEEECCSCCEESSEEEEC----------------CCCSE--EEEEEEEEHHHHHHHHHHHSSC
T ss_pred eEEEECCEEEEEcC-CCcEEECCCCCCCCeEEEEe----------------cCCce--EEecCCCCCHHHHHHHHHhhhc
Confidence 89999999999887 78999998777788855542 33211 1225555677777777788775
Q ss_pred cceE--EEecCCCCceEEEEeC-CcCCCc
Q psy4616 237 TNVL--LSTDSNFTNVMVTYIG-EVIPTH 262 (321)
Q Consensus 237 ~N~l--i~adedF~~i~v~~Ig-~~~P~~ 262 (321)
-|+. |..+-.|+.++++.++ +..|-+
T Consensus 109 ~N~f~airi~G~F~~v~~R~vp~Q~~Py~ 137 (237)
T 1xv2_A 109 ENLFSAVKIYGTFKHMHVRMMPAQQPPYT 137 (237)
T ss_dssp TTSCEEEEEEEEEEEEEEECCCCCCSSCC
T ss_pred cccEEEEEEEEEeCeEEEEecCCCCCCCC
Confidence 5764 4667789999999887 333433
No 41
>1u5f_A SRC-associated adaptor protein; PH domain of SKAP-HOM, artefactual dimerization induced by V derived sequence, signaling protein; 1.90A {Mus musculus} SCOP: b.55.1.1 PDB: 1u5g_A
Probab=20.46 E-value=1.4e+02 Score=23.39 Aligned_cols=79 Identities=16% Similarity=0.256 Sum_probs=39.4
Q ss_pred ceEEEeecc----ccccccceeeeccccCccCCcchhhh-hcccceEEEecCCCCceEEEEeCCc--CCCccceeeeEcC
Q psy4616 199 GYMIHESGV----WSEYHQRWFFLPRRSSHFKYDEVTDE-RMATNVLLSTDSNFTNVMVTYIGEV--IPTHGYSSFKFLP 271 (321)
Q Consensus 199 GYmiHEav~----WS~~~k~WfFLPRR~S~e~Yde~~DE-~rG~N~li~adedF~~i~v~~Ig~~--~P~~GFSSFKFvP 271 (321)
|||..-... ...+++|||.|= ...-.-|....|. .+|+ | +...+.++..... +..+. -.|+.+.
T Consensus 21 G~L~K~g~~~~~~~k~WkkR~fvL~-~~~L~yyk~~~~~~~~g~---i----~L~~~~v~~~~~~~~~~~~~-~~F~I~~ 91 (148)
T 1u5f_A 21 GYLEKRRKDHSFLGFEWQKRWCALS-KTVFYYYGSDKDKQQKGE---F----AIDGYDVRMNNTLRKDGKKD-CCFEICA 91 (148)
T ss_dssp EEEEEECCCSSCSSCSEEEEEEEEE-TTEEEEESSTTCSSCSEE---E----ECTTCEEEECTTSCSSTTGG-GEEEEEC
T ss_pred EEEEEeCCCCCCcCCCceeEEEEEE-CCEEEEEcCCCCcccceE---E----EcCCcEEEECCCcccCCCCc-cEEEEEC
Confidence 999887643 247799999993 3333344433332 2222 1 2344555544321 22222 2566655
Q ss_pred CCCCeEEEEEeeeec
Q psy4616 272 GTKDRVIVALKSEED 286 (321)
Q Consensus 272 gT~D~iIvALKSeE~ 286 (321)
.......++-.|+|.
T Consensus 92 ~~~r~~~l~a~s~~e 106 (148)
T 1u5f_A 92 PDKRIYQFTAASPKD 106 (148)
T ss_dssp TTSCEEEEECSSHHH
T ss_pred CCCcEEEEECCCHHH
Confidence 443455555555543
No 42
>1v5p_A Pleckstrin homology domain-containing, family A; TAPP2, the pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=20.38 E-value=41 Score=26.82 Aligned_cols=31 Identities=23% Similarity=0.485 Sum_probs=23.0
Q ss_pred ceEEEee-ccccccccceeeeccc-cCccCC-cc
Q psy4616 199 GYMIHES-GVWSEYHQRWFFLPRR-SSHFKY-DE 229 (321)
Q Consensus 199 GYmiHEa-v~WS~~~k~WfFLPRR-~S~e~Y-de 229 (321)
|||.... ...-.+++|||.|-.+ -...-| ++
T Consensus 19 G~L~K~g~~~~k~WkrRwFvL~~~~~~~L~Y~k~ 52 (126)
T 1v5p_A 19 GFLDIEDNENSGKFLRRYFILDTQANCLLWYMDN 52 (126)
T ss_dssp CCEEEECTTCSSCEEEEEEEEETTTTEEEEESSC
T ss_pred EEEEEeCCCCCCCccceEEEEecCCCCEEEEECC
Confidence 9999986 7788999999999532 334445 44
No 43
>3mtw_A L-arginine carboxypeptidase CC2672; hydrolase; HET: KCX M3R; 1.70A {Caulobacter vibrioides}
Probab=20.31 E-value=69 Score=26.50 Aligned_cols=50 Identities=20% Similarity=0.323 Sum_probs=27.0
Q ss_pred eEEEEeCC-cCCCccceeeeEcCCC----CCeEEEEEeee-ecCCeeeEEEEEEeeCceEeec
Q psy4616 250 VMVTYIGE-VIPTHGYSSFKFLPGT----KDRVIVALKSE-EDKGRTATYITAFTLAGTILVP 306 (321)
Q Consensus 250 i~v~~Ig~-~~P~~GFSSFKFvPgT----~D~iIvALKSe-E~~g~~aTyItvF~i~G~iLLp 306 (321)
+++++=+. +||..| +++++. +|..|+++=+. |....- ..++|..|+++||
T Consensus 3 ~~aI~narviD~~~g----~~i~~~~V~I~dG~I~~Ig~~~~~~~~~---~~vID~~G~~v~P 58 (403)
T 3mtw_A 3 IKAVSAARLLDVASG----KYVDNPLVIVTDGRITSIGKKGDAVPAG---ATAVDLPGVTLLP 58 (403)
T ss_dssp EEEEEEEEEEETTTT----EEEESEEEEEETTEEEEEEETTCCCCTT---CEEEEEEEEEEEE
T ss_pred cEEEEceEEEECCCC----cEecCcEEEEECCEEEEEeCCCCCCCCC---CEEEECCCCEEEe
Confidence 44443333 456655 334331 35556777433 211111 2479999999999
Done!