BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4618
(96 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5XI32|CAPZB_RAT F-actin-capping protein subunit beta OS=Rattus norvegicus
GN=Capzb PE=1 SV=1
Length = 272
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/35 (80%), Positives = 31/35 (88%)
Query: 41 DSITPSDQPLKIARDKEMGKDYLLCDYNRDGDSYR 75
D ++ DQPLKIARDK +GKDYLLCDYNRDGDSYR
Sbjct: 38 DLLSSVDQPLKIARDKVVGKDYLLCDYNRDGDSYR 72
>sp|Q5R507|CAPZB_PONAB F-actin-capping protein subunit beta OS=Pongo abelii GN=CAPZB
PE=2 SV=2
Length = 272
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/35 (80%), Positives = 31/35 (88%)
Query: 41 DSITPSDQPLKIARDKEMGKDYLLCDYNRDGDSYR 75
D ++ DQPLKIARDK +GKDYLLCDYNRDGDSYR
Sbjct: 38 DLLSSVDQPLKIARDKVVGKDYLLCDYNRDGDSYR 72
>sp|P48603|CAPZB_DROME F-actin-capping protein subunit beta OS=Drosophila melanogaster
GN=cpb PE=2 SV=1
Length = 276
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/35 (80%), Positives = 31/35 (88%)
Query: 41 DSITPSDQPLKIARDKEMGKDYLLCDYNRDGDSYR 75
D ++ DQPLKIA+DKE GKDYLLCDYNRDGDSYR
Sbjct: 38 DLLSSVDQPLKIAKDKEHGKDYLLCDYNRDGDSYR 72
>sp|P14315|CAPZB_CHICK F-actin-capping protein subunit beta isoforms 1 and 2 OS=Gallus
gallus GN=CAPZB PE=1 SV=3
Length = 277
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/35 (80%), Positives = 31/35 (88%)
Query: 41 DSITPSDQPLKIARDKEMGKDYLLCDYNRDGDSYR 75
D ++ DQPLKIARDK +GKDYLLCDYNRDGDSYR
Sbjct: 38 DLLSSVDQPLKIARDKVVGKDYLLCDYNRDGDSYR 72
>sp|P47756|CAPZB_HUMAN F-actin-capping protein subunit beta OS=Homo sapiens GN=CAPZB
PE=1 SV=4
Length = 277
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/35 (80%), Positives = 31/35 (88%)
Query: 41 DSITPSDQPLKIARDKEMGKDYLLCDYNRDGDSYR 75
D ++ DQPLKIARDK +GKDYLLCDYNRDGDSYR
Sbjct: 38 DLLSSVDQPLKIARDKVVGKDYLLCDYNRDGDSYR 72
>sp|P79136|CAPZB_BOVIN F-actin-capping protein subunit beta OS=Bos taurus GN=CAPZB PE=1
SV=1
Length = 301
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/35 (80%), Positives = 31/35 (88%)
Query: 41 DSITPSDQPLKIARDKEMGKDYLLCDYNRDGDSYR 75
D ++ DQPLKIARDK +GKDYLLCDYNRDGDSYR
Sbjct: 67 DLLSSVDQPLKIARDKVVGKDYLLCDYNRDGDSYR 101
>sp|P47757|CAPZB_MOUSE F-actin-capping protein subunit beta OS=Mus musculus GN=Capzb
PE=1 SV=3
Length = 277
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/35 (80%), Positives = 31/35 (88%)
Query: 41 DSITPSDQPLKIARDKEMGKDYLLCDYNRDGDSYR 75
D ++ DQPLKIARDK +GKDYLLCDYNRDGDSYR
Sbjct: 38 DLLSSVDQPLKIARDKVVGKDYLLCDYNRDGDSYR 72
>sp|A0PFK7|CAPZB_PIG F-actin-capping protein subunit beta OS=Sus scrofa GN=CAPZB PE=2
SV=1
Length = 277
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/35 (80%), Positives = 31/35 (88%)
Query: 41 DSITPSDQPLKIARDKEMGKDYLLCDYNRDGDSYR 75
D ++ DQPLKIARDK +GKDYLLCDYNRDGDSYR
Sbjct: 38 DLLSSVDQPLKIARDKVVGKDYLLCDYNRDGDSYR 72
>sp|P34686|CAPZB_CAEEL F-actin-capping protein subunit beta OS=Caenorhabditis elegans
GN=cap-2 PE=2 SV=1
Length = 270
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 34/50 (68%)
Query: 41 DSITPSDQPLKIARDKEMGKDYLLCDYNRDGDSYRHRAAKAIDTYFKSGR 90
D ++ DQPLKIA D+E GK YLLCDYNRDGDSYR + D + G+
Sbjct: 38 DLLSTIDQPLKIAADRETGKQYLLCDYNRDGDSYRSPWSNTYDPPLEDGQ 87
>sp|Q7SCP4|CAPZB_NEUCR F-actin-capping protein subunit beta OS=Neurospora crassa (strain
ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC
987) GN=cap-2 PE=3 SV=3
Length = 289
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 28/35 (80%)
Query: 41 DSITPSDQPLKIARDKEMGKDYLLCDYNRDGDSYR 75
D ++ DQPL + R K+ G+DYLLCDYNRDGDSYR
Sbjct: 39 DLLSSVDQPLTVKRCKQTGRDYLLCDYNRDGDSYR 73
>sp|Q4INI2|CAPZB_GIBZE F-actin-capping protein subunit beta OS=Gibberella zeae (strain
PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=CAP2
PE=3 SV=1
Length = 282
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 28/35 (80%)
Query: 41 DSITPSDQPLKIARDKEMGKDYLLCDYNRDGDSYR 75
D ++ DQPL + R K+ G+DYLLCDYNRDGDSYR
Sbjct: 38 DLLSSVDQPLTVRRCKQTGRDYLLCDYNRDGDSYR 72
>sp|Q9M9G7|CAPZB_ARATH Probable F-actin-capping protein subunit beta OS=Arabidopsis
thaliana GN=At1g71790 PE=2 SV=1
Length = 256
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 28/36 (77%)
Query: 40 SDSITPSDQPLKIARDKEMGKDYLLCDYNRDGDSYR 75
SD ++ D PL++ RD E GKD++LC+YNRD DSYR
Sbjct: 32 SDLLSQVDLPLQVLRDIESGKDFILCEYNRDADSYR 67
>sp|Q4WKB4|CAPZB_ASPFU F-actin-capping protein subunit beta OS=Neosartorya fumigata
(strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
GN=cap2 PE=3 SV=1
Length = 322
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 31/49 (63%)
Query: 41 DSITPSDQPLKIARDKEMGKDYLLCDYNRDGDSYRHRAAKAIDTYFKSG 89
D ++ DQPL+I R + +DYLLCDYNRDGDSYR + D + G
Sbjct: 75 DLLSSVDQPLEIRRCPKTNRDYLLCDYNRDGDSYRSPWSNEFDPPLEDG 123
>sp|P13021|CAPZB_DICDI F-actin-capping protein subunit beta OS=Dictyostelium discoideum
GN=acpA PE=1 SV=1
Length = 272
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 26/35 (74%)
Query: 41 DSITPSDQPLKIARDKEMGKDYLLCDYNRDGDSYR 75
D ++ DQPLK+A D KDYLLCDYNRD DSYR
Sbjct: 38 DLLSSIDQPLKVAYDAVSKKDYLLCDYNRDADSYR 72
>sp|Q2URJ3|CAPZB_ASPOR F-actin-capping protein subunit beta OS=Aspergillus oryzae
(strain ATCC 42149 / RIB 40) GN=cap2 PE=3 SV=1
Length = 266
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 27/35 (77%)
Query: 41 DSITPSDQPLKIARDKEMGKDYLLCDYNRDGDSYR 75
D ++ DQPL+I R + +DYLLCDYNRDGDSYR
Sbjct: 38 DLLSSVDQPLEIRRCSKTKRDYLLCDYNRDGDSYR 72
>sp|Q5BGP0|CAPZB_EMENI F-actin-capping protein subunit beta OS=Emericella nidulans
(strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 /
M139) GN=cap2 PE=3 SV=1
Length = 266
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 27/35 (77%)
Query: 41 DSITPSDQPLKIARDKEMGKDYLLCDYNRDGDSYR 75
D ++ DQPL+I R + +DYLLCDYNRDGDSYR
Sbjct: 38 DLLSSVDQPLEIRRCPKTKRDYLLCDYNRDGDSYR 72
>sp|Q9HGP5|CAPZB_SCHPO F-actin-capping protein subunit beta OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=acp2 PE=1 SV=1
Length = 268
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 27/46 (58%)
Query: 47 DQPLKIARDKEMGKDYLLCDYNRDGDSYRHRAAKAIDTYFKSGRGS 92
DQPLK+ E G YLLCD+NRDGDSYR + D + G S
Sbjct: 42 DQPLKVNTCSESGNQYLLCDFNRDGDSYRSPWSNKYDPPLEDGLVS 87
>sp|Q6BXG6|CAPZB_DEBHA F-actin-capping protein subunit beta OS=Debaryomyces hansenii
(strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 /
IGC 2968) GN=CAP2 PE=3 SV=2
Length = 297
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 25/35 (71%)
Query: 41 DSITPSDQPLKIARDKEMGKDYLLCDYNRDGDSYR 75
D ++ D PL+ + E GK+YL CDYNRDGDSYR
Sbjct: 48 DLLSSVDVPLRTQKCDETGKEYLCCDYNRDGDSYR 82
>sp|Q6CBA2|CAPZB_YARLI F-actin-capping protein subunit beta OS=Yarrowia lipolytica
(strain CLIB 122 / E 150) GN=CAP2 PE=3 SV=2
Length = 260
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 41 DSITPSDQPLKIARDKEMGKDYLLCDYNRDGDSYR 75
D ++ DQPL + K K+YL CDYNRDGDS+R
Sbjct: 38 DLLSSVDQPLGVKTCKSTKKEYLTCDYNRDGDSFR 72
>sp|Q6FQL7|CAPZB_CANGA F-actin-capping protein subunit beta OS=Candida glabrata (strain
ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=CAP2 PE=3 SV=1
Length = 270
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 41 DSITPSDQPLKIARD-KEMGKDYLLCDYNRDGDSYR 75
D ++ D PLK+ +D K+ G+ +L CDYNRD DSYR
Sbjct: 37 DLLSSIDVPLKVQQDSKQSGRPFLCCDYNRDVDSYR 72
>sp|Q6CPK5|CAPZB_KLULA F-actin-capping protein subunit beta OS=Kluyveromyces lactis
(strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
NRRL Y-1140 / WM37) GN=CAP2 PE=3 SV=1
Length = 279
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Query: 47 DQPLKIARDKEMG-KDYLLCDYNRDGDSYR 75
D PL I +D + K++L CDYNRD DS+R
Sbjct: 45 DIPLTIKKDTDANNKEFLCCDYNRDIDSHR 74
>sp|P13517|CAPZB_YEAST F-actin-capping protein subunit beta OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=CAP2 PE=1 SV=3
Length = 287
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Query: 41 DSITPSDQPLKIARDK-EMGKDYLLCDYNRDGDSYR 75
D ++ D PL +D + ++YL CDYNRD DS+R
Sbjct: 38 DLLSSVDVPLSTQKDSADSNREYLCCDYNRDIDSFR 73
>sp|P25604|STP22_YEAST Suppressor protein STP22 of temperature-sensitive alpha-factor
receptor and arginine permease OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=STP22 PE=1
SV=3
Length = 385
Score = 29.6 bits (65), Expect = 5.2, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
Query: 11 NASPDSMQANRSSGSMHTLSPYSDDSSQKSDSITPSDQPLKIARDKEMGKDYLLCDYNRD 70
NA D + ANR+ + + + DD S ++ +D ++ + +DY L D
Sbjct: 287 NAQIDVLTANRAKVQQFSSTSHVDDEDVNSIAVAKTDGLNQLY--NLVAQDYALTDTIEC 344
Query: 71 GDSYRHRAAKAIDTYFKSGR 90
HR +DT+ K GR
Sbjct: 345 LSRMLHRGTIPLDTFVKQGR 364
>sp|Q9C0H2|TTYH3_HUMAN Protein tweety homolog 3 OS=Homo sapiens GN=TTYH3 PE=1 SV=3
Length = 523
Score = 29.3 bits (64), Expect = 7.8, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 5 ESDGEANASPDSMQANRSSGSMHTLSPYSDDSSQKSDSITPS 46
+ DGE A+P QA+ S +H S YS SS S++ P+
Sbjct: 420 DEDGEEEAAPGPRQAHDSLYRVHMPSLYSCGSSYGSETSIPA 461
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.306 0.122 0.338
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,053,650
Number of Sequences: 539616
Number of extensions: 1243162
Number of successful extensions: 7020
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 49
Number of HSP's that attempted gapping in prelim test: 3374
Number of HSP's gapped (non-prelim): 3127
length of query: 96
length of database: 191,569,459
effective HSP length: 66
effective length of query: 30
effective length of database: 155,954,803
effective search space: 4678644090
effective search space used: 4678644090
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 55 (25.8 bits)