BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>psy4622
MTTRFSGMVAFVVILVCTIILLLSGLICLIVYRHYLHRINANLNFDNPVYRKTTEDQFSL
EKNPYTPARIYPTSISEEVRCLQT

High Scoring Gene Products

Symbol, full name Information P value
LpR2
Lipophorin receptor 2
protein from Drosophila melanogaster 4.9e-06
LpR1
Lipophorin receptor 1
protein from Drosophila melanogaster 1.3e-05

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  psy4622
        (84 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

FB|FBgn0051092 - symbol:LpR2 "Lipophorin receptor 2" spec...   119  4.9e-06   1
FB|FBgn0066101 - symbol:LpR1 "Lipophorin receptor 1" spec...   115  1.3e-05   1


>FB|FBgn0051092 [details] [associations]
            symbol:LpR2 "Lipophorin receptor 2" species:7227 "Drosophila
            melanogaster" [GO:0005041 "low-density lipoprotein receptor
            activity" evidence=ISS] [GO:0005509 "calcium ion binding"
            evidence=IEA] [GO:0048812 "neuron projection morphogenesis"
            evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA]
            InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR002172
            InterPro:IPR018097 Pfam:PF00057 PROSITE:PS01187 PROSITE:PS50026
            PROSITE:PS50068 SMART:SM00179 SMART:SM00181 SMART:SM00192
            InterPro:IPR000033 InterPro:IPR000152 EMBL:AE014297 GO:GO:0016021
            GO:GO:0005886 Gene3D:2.120.10.30 InterPro:IPR011042 SMART:SM00135
            PROSITE:PS51120 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS01186
            Gene3D:4.10.400.10 InterPro:IPR023415 SUPFAM:SSF57424
            PROSITE:PS01209 PROSITE:PS00010 InterPro:IPR026823 Pfam:PF12662
            Pfam:PF00058 GeneTree:ENSGT00700000104037 HSSP:Q07954
            UniGene:Dm.10816 GeneID:43105 KEGG:dme:Dmel_CG31092 CTD:43105
            FlyBase:FBgn0051092 GenomeRNAi:43105 NextBio:832243 EMBL:BT010074
            RefSeq:NP_001097928.1 SMR:Q7YU01 EnsemblMetazoa:FBtr0113386
            UCSC:CG31092-RE InParanoid:Q7YU01 OMA:CEFLCLP Uniprot:Q7YU01
        Length = 1064

 Score = 119 (46.9 bits), Expect = 4.9e-06, P = 4.9e-06
 Identities = 27/48 (56%), Positives = 32/48 (66%)

Query:    31 VYRHYLHRINANLNFDNPVYRKTTEDQFSLEKNPYTPARIYPTSISEE 78
             VYR     +N+ +NF+NPVY KTTED FSLEKN  TP  IY  +  EE
Sbjct:  1007 VYRRCTRAVNS-MNFENPVYHKTTEDHFSLEKNG-TP-HIYAAANDEE 1051


>FB|FBgn0066101 [details] [associations]
            symbol:LpR1 "Lipophorin receptor 1" species:7227 "Drosophila
            melanogaster" [GO:0042953 "lipoprotein transport" evidence=ISS]
            [GO:0008203 "cholesterol metabolic process" evidence=ISS]
            [GO:0005041 "low-density lipoprotein receptor activity"
            evidence=ISS] [GO:0016020 "membrane" evidence=ISS] [GO:0005509
            "calcium ion binding" evidence=IEA] [GO:0004872 "receptor activity"
            evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
            evidence=IEP;IMP] InterPro:IPR000742 InterPro:IPR001881
            InterPro:IPR002172 InterPro:IPR018097 Pfam:PF00057 PROSITE:PS01187
            PROSITE:PS50026 PROSITE:PS50068 SMART:SM00179 SMART:SM00181
            SMART:SM00192 InterPro:IPR000033 InterPro:IPR000152 EMBL:AE014297
            GO:GO:0016021 GO:GO:0006898 Gene3D:2.120.10.30 InterPro:IPR011042
            SMART:SM00135 PROSITE:PS51120 GO:GO:0005509 GO:GO:0004872
            InterPro:IPR013032 PROSITE:PS01186 Gene3D:4.10.400.10
            InterPro:IPR023415 SUPFAM:SSF57424 PROSITE:PS01209 PROSITE:PS00010
            InterPro:IPR026823 Pfam:PF12662 Pfam:PF00058 eggNOG:NOG255913
            GeneTree:ENSGT00700000104037 RefSeq:NP_001097934.2 UniGene:Dm.14926
            ProteinModelPortal:A8JRD0 SMR:A8JRD0 STRING:A8JRD0
            EnsemblMetazoa:FBtr0301470 EnsemblMetazoa:FBtr0333195
            EnsemblMetazoa:FBtr0333197 GeneID:2768687 KEGG:dme:Dmel_CG31094
            UCSC:CG31094-RF CTD:2768687 FlyBase:FBgn0066101 OMA:CSKRRIN
            GenomeRNAi:2768687 NextBio:848109 Bgee:A8JRD0 Uniprot:A8JRD0
        Length = 1076

 Score = 115 (45.5 bits), Expect = 1.3e-05, P = 1.3e-05
 Identities = 29/51 (56%), Positives = 36/51 (70%)

Query:    32 YRHYL-HRINANLNFDNPVYRKTT--EDQFSLEKNPYTPARIYP-TSISEE 78
             YR+    RIN+ +NF+NP+YRKTT  ED FSL KN   PARIY  TS+ +E
Sbjct:  1018 YRYCSKRRINS-MNFENPIYRKTTTTEDHFSLRKN--LPARIYDHTSVMDE 1065


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.134   0.402    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       84        65   0.00091  102 3  11 22  0.38    28
                                                     29  0.46    28


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  483 (51 KB)
  Total size of DFA:  87 KB (2066 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:01
  No. of threads or processors used:  24
  Search cpu time:  7.92u 0.08s 8.00t   Elapsed:  00:00:04
  Total cpu time:  7.92u 0.08s 8.00t   Elapsed:  00:00:05
  Start:  Thu Aug 15 12:21:17 2013   End:  Thu Aug 15 12:21:22 2013

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