BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy4624
         (160 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|P91621|SIF1_DROME Protein still life, isoform SIF type 1 OS=Drosophila melanogaster
           GN=sif PE=2 SV=2
          Length = 2072

 Score =  281 bits (718), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 132/155 (85%), Positives = 140/155 (90%), Gaps = 10/155 (6%)

Query: 1   MGNKLSACSCAPLMRKAYRYEDSPWQTSKRRDGHLL---RLWAEVFHVSASGAGSVKWQQ 57
           MGNKLS CSCAPLMRKAYRYEDSPWQ+S+RRDGHLL   RLWAEVFHVSASGAG+VKWQQ
Sbjct: 1   MGNKLS-CSCAPLMRKAYRYEDSPWQSSRRRDGHLLSSFRLWAEVFHVSASGAGTVKWQQ 59

Query: 58  VSEDLVPVNITCIQDAPNCIFLITAYNSQVDKILDVKLVQPGTRIGQASECFVYWKDPNT 117
           VSEDLVPVNITCIQD+P CIF ITAYNSQVDKILDV+LVQPGTRIGQASECFVYWKDP T
Sbjct: 60  VSEDLVPVNITCIQDSPECIFHITAYNSQVDKILDVRLVQPGTRIGQASECFVYWKDPMT 119

Query: 118 NDTWGLNFTSPIDARQFRECCVSTITFYILFKFTR 152
           NDTWGLNFTSPIDA+QFRECC  +      FKF+R
Sbjct: 120 NDTWGLNFTSPIDAKQFRECCSPS------FKFSR 148


>sp|P50551|VASP_CANFA Vasodilator-stimulated phosphoprotein OS=Canis familiaris GN=VASP
           PE=2 SV=3
          Length = 384

 Score = 34.7 bits (78), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 5/59 (8%)

Query: 78  FLITAYNSQVDK--ILDVKLVQPGTRIGQASECFVYWKDPNTNDTWGLNFTSPIDARQF 134
           F +  +  Q D+  +++  +V+ G +  QA+  F  W+D      WGLNF S  DA QF
Sbjct: 47  FRVVGWKMQPDQQVVINCAIVR-GIKYNQATPTFHQWRD--ARQVWGLNFGSKEDATQF 102


>sp|Q2TA49|VASP_BOVIN Vasodilator-stimulated phosphoprotein OS=Bos taurus GN=VASP PE=2
           SV=3
          Length = 383

 Score = 34.3 bits (77), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 5/67 (7%)

Query: 78  FLITAYNSQVDK--ILDVKLVQPGTRIGQASECFVYWKDPNTNDTWGLNFTSPIDARQFR 135
           F +     Q D+  +++  +V+ G +  QA+  F  W+D      WGLNF S  DA QF 
Sbjct: 47  FRVVGRKMQPDQQVVINCAIVR-GVKYNQATPNFHQWRD--ARQVWGLNFGSKEDATQFA 103

Query: 136 ECCVSTI 142
               S +
Sbjct: 104 NGMASAL 110


>sp|P50552|VASP_HUMAN Vasodilator-stimulated phosphoprotein OS=Homo sapiens GN=VASP PE=1
           SV=3
          Length = 380

 Score = 34.3 bits (77), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 5/67 (7%)

Query: 78  FLITAYNSQVDK--ILDVKLVQPGTRIGQASECFVYWKDPNTNDTWGLNFTSPIDARQFR 135
           F +     Q D+  +++  +V+ G +  QA+  F  W+D      WGLNF S  DA QF 
Sbjct: 47  FRVVGRKMQPDQQVVINCAIVR-GVKYNQATPNFHQWRD--ARQVWGLNFGSKEDAAQFA 103

Query: 136 ECCVSTI 142
               S +
Sbjct: 104 AGMASAL 110


>sp|P70460|VASP_MOUSE Vasodilator-stimulated phosphoprotein OS=Mus musculus GN=Vasp PE=1
           SV=4
          Length = 375

 Score = 32.7 bits (73), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 5/59 (8%)

Query: 78  FLITAYNSQVDK--ILDVKLVQPGTRIGQASECFVYWKDPNTNDTWGLNFTSPIDARQF 134
           F +     Q D+  +++  +++ G +  QA+  F  W+D      WGLNF S  DA QF
Sbjct: 47  FRVVGRKMQPDQQVVINCAIIR-GVKYNQATPIFHQWRD--ARQVWGLNFGSKEDAIQF 102


>sp|Q8YQL7|DHSL_NOSS1 Deoxyhypusine synthase-like protein OS=Nostoc sp. (strain PCC 7120
           / UTEX 2576) GN=alr3804 PE=3 SV=1
          Length = 383

 Score = 30.0 bits (66), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 13/38 (34%), Positives = 21/38 (55%)

Query: 46  SASGAGSVKWQQVSEDLVPVNITCIQDAPNCIFLITAY 83
            A+ A +V W ++  D +P  I C  D+   + L+TAY
Sbjct: 290 GATPAEAVSWGKIDPDELPSTIVCYTDSTIALPLVTAY 327


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.324    0.136    0.443 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,872,723
Number of Sequences: 539616
Number of extensions: 2293159
Number of successful extensions: 5223
Number of sequences better than 100.0: 7
Number of HSP's better than 100.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 5219
Number of HSP's gapped (non-prelim): 7
length of query: 160
length of database: 191,569,459
effective HSP length: 108
effective length of query: 52
effective length of database: 133,290,931
effective search space: 6931128412
effective search space used: 6931128412
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 56 (26.2 bits)