Query psy4624
Match_columns 160
No_of_seqs 8 out of 10
Neff 1.6
Searched_HMMs 29240
Date Fri Aug 16 21:36:11 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4624.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/4624hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2jp2_A Spred-2, sprouty-relate 98.2 3.1E-06 1.1E-10 62.8 7.0 101 32-137 12-116 (126)
2 3syx_A Sprouty-related, EVH1 d 98.2 4.3E-06 1.5E-10 63.5 7.7 97 36-137 14-114 (130)
3 1ddw_A GLGF-domain protein hom 98.2 7.2E-06 2.5E-10 60.2 7.8 95 37-137 8-102 (120)
4 1xod_A Spred1; sprouty, EVH1, 98.1 3.1E-06 1.1E-10 61.8 5.2 100 32-136 3-106 (118)
5 1evh_A WH1 domain, protein (ME 97.9 5.2E-05 1.8E-09 54.6 7.7 94 37-137 8-103 (112)
6 1i2h_A PSD-ZIP45(homer-1C/VESL 97.8 4.4E-05 1.5E-09 59.7 7.4 99 33-137 9-107 (168)
7 1egx_A VAsp, vasodilator-stimu 97.8 4.2E-05 1.4E-09 55.4 6.7 92 39-137 10-105 (115)
8 1qc6_A EVH1 domain from ENA/VA 97.7 0.00013 4.5E-09 53.1 7.7 96 36-138 7-105 (130)
9 1mke_A WIP - N-WAsp, fusion pr 89.7 1.2 4E-05 34.1 7.1 78 53-136 57-134 (152)
10 2crf_A RAN binding protein 3; 88.9 1.7 5.9E-05 32.3 7.3 85 54-138 45-133 (150)
11 2ifs_A N-WAsp, wiskott-aldrich 88.7 1.2 4.1E-05 34.5 6.6 78 53-136 74-151 (169)
12 3n7c_A ABR034WP; nuclear pore 85.5 1.2 4.2E-05 32.5 4.7 60 78-137 50-114 (130)
13 2y8g_A Ranbp3-B, RAN-binding p 74.5 17 0.00059 26.4 7.8 86 54-139 33-122 (138)
14 2epb_A Chromodomain-helicase-D 60.6 10 0.00034 24.8 3.7 35 86-122 13-50 (68)
15 1xke_A RAN-binding protein 2; 57.2 21 0.00073 25.5 5.2 59 78-137 46-113 (130)
16 2yuw_A Myosin binding protein 55.4 9.9 0.00034 23.6 2.9 36 51-86 50-88 (110)
17 1rrp_B Nuclear pore complex pr 54.5 12 0.00043 26.8 3.6 59 79-137 61-127 (134)
18 2db8_A Tripartite motif protei 53.8 22 0.00077 22.6 4.5 34 53-86 54-88 (110)
19 1ncq_C Coat protein VP3; HRV, 53.3 2.3 8E-05 33.9 -0.5 58 56-116 47-111 (236)
20 4hae_A CDY-like 2, chromodomai 52.3 13 0.00046 25.1 3.3 33 85-122 24-57 (81)
21 1x5g_A Neogenin; RGM binding, 49.5 13 0.00045 23.0 2.7 34 53-86 61-94 (116)
22 2e7h_A Ephrin type-B receptor 48.9 25 0.00084 21.9 4.0 35 53-87 54-88 (109)
23 1x5l_A Ephrin type-A receptor 48.2 15 0.00052 22.5 2.8 36 51-86 54-89 (111)
24 2djs_A Ephrin type-B receptor 47.7 23 0.0008 21.7 3.7 33 55-87 55-87 (108)
25 2rsn_A Chromo domain-containin 47.3 17 0.00058 24.2 3.1 32 86-122 23-55 (75)
26 2edy_A Receptor-type tyrosine- 46.6 11 0.00036 22.8 1.9 35 53-87 54-88 (103)
27 1hxs_3 Genome polyprotein, coa 46.3 4.9 0.00017 32.0 0.4 54 60-116 50-114 (237)
28 1wfo_A Sidekick 2; FN3, cell a 46.1 20 0.0007 22.6 3.3 31 57-87 79-109 (130)
29 1x5y_A Myosin binding protein 45.7 20 0.00069 22.3 3.2 35 52-86 52-89 (111)
30 2ed8_A Netrin receptor DCC; tu 44.7 20 0.00068 21.9 3.0 34 53-86 51-84 (106)
31 2ede_A Netrin receptor DCC; tu 44.6 30 0.001 21.2 3.8 34 53-86 57-92 (114)
32 3g7l_A Chromo domain-containin 43.8 19 0.00066 22.8 2.9 31 86-121 9-40 (61)
33 1bev_3 Bovine enterovirus coat 43.0 5.8 0.0002 31.7 0.3 56 60-116 50-113 (242)
34 2l2r_A Antimicrobial peptide e 42.0 6.8 0.00023 24.8 0.5 10 18-27 13-22 (37)
35 3f2u_A Chromobox protein homol 41.9 26 0.00088 21.6 3.2 31 86-122 4-35 (55)
36 2qkl_A DCP1 protein, SPBC3B9.2 41.6 65 0.0022 23.5 5.8 84 42-137 35-120 (127)
37 2dm4_A Sortilin-related recept 40.9 24 0.00083 21.7 3.0 35 53-87 53-87 (108)
38 1wfn_A Sidekick 2; FN3, cell a 39.6 38 0.0013 21.0 3.8 32 56-87 67-98 (119)
39 3t04_D Monobody 7C12; engineer 39.4 47 0.0016 20.9 4.3 35 51-85 52-86 (103)
40 3fdt_A Chromobox protein homol 39.0 24 0.00083 22.1 2.8 43 86-134 5-50 (59)
41 1dy2_A Collagen alpha1(XV) cha 38.0 9.6 0.00033 30.6 0.9 31 11-44 54-84 (180)
42 2d9u_A Chromobox protein homol 37.5 47 0.0016 21.7 4.1 31 86-122 12-43 (74)
43 3vbh_C EV71, genome polyprotei 37.1 10 0.00035 30.5 0.9 56 60-116 50-115 (242)
44 2dnv_A Chromobox protein homol 35.8 42 0.0014 21.3 3.6 43 86-134 12-57 (64)
45 1m11_3 Coat protein VP3; decay 35.7 16 0.00056 28.8 1.9 56 60-115 50-113 (238)
46 3lwe_A M-phase phosphoprotein 35.3 33 0.0011 21.6 3.0 32 85-122 5-37 (62)
47 3h91_A Chromobox protein homol 34.0 33 0.0011 21.0 2.8 43 86-134 5-50 (54)
48 1g6z_A CLR4 protein; transfera 33.7 22 0.00075 22.9 1.9 34 85-122 9-43 (70)
49 1aym_3 HRV16, human rhinovirus 33.0 6.6 0.00023 31.3 -0.8 56 60-116 50-113 (238)
50 2dnt_A Chromodomain protein, Y 32.9 35 0.0012 22.5 2.9 32 86-122 15-47 (78)
51 2oqb_A Histone-arginine methyl 32.6 1.6E+02 0.0053 22.1 6.8 70 65-137 13-101 (117)
52 3p4l_A Neogenin; iron homeosta 32.3 47 0.0016 22.3 3.5 29 58-86 161-189 (211)
53 1pfb_A Polycomb protein; chrom 32.3 37 0.0013 20.8 2.8 31 86-122 5-36 (55)
54 2k1b_A Chromobox protein homol 32.1 39 0.0013 22.5 3.0 32 85-122 22-54 (73)
55 1pdq_A Polycomb protein; methy 31.8 33 0.0011 22.9 2.6 31 86-122 22-53 (72)
56 2edx_A Protein tyrosine phosph 29.7 44 0.0015 20.8 2.9 27 60-86 76-102 (134)
57 1q3l_A Heterochromatin protein 29.5 45 0.0015 22.0 2.9 32 85-122 17-49 (69)
58 1x3p_A Cpsrp43; chromo-2 domai 28.2 11 0.00039 23.7 -0.2 32 86-122 2-33 (54)
59 2lju_A Putative oxidoreductase 28.0 30 0.001 25.3 2.0 19 122-140 63-81 (108)
60 2yrz_A Integrin beta-4; GP150, 27.4 78 0.0027 19.5 3.7 25 62-86 72-96 (118)
61 1bpv_A Titin, A71, connectin; 27.4 51 0.0018 21.5 3.0 35 53-87 55-92 (112)
62 2ee1_A Chromodomain helicase-D 26.4 50 0.0017 21.7 2.7 34 85-123 12-46 (64)
63 4gb3_3 Coat protein 3; capsid 26.0 19 0.00064 28.6 0.7 57 60-116 50-114 (238)
64 2mev_3 Mengo virus coat protei 26.0 15 0.00052 29.0 0.2 52 60-116 51-108 (231)
65 2edb_A Netrin receptor DCC; tu 25.8 91 0.0031 19.8 3.9 32 56-87 64-95 (116)
66 3k2m_C Monobody HA4; engineere 25.8 1E+02 0.0035 19.2 4.1 32 56-87 53-84 (101)
67 2dju_A Receptor-type tyrosine- 25.8 59 0.002 19.3 2.8 33 54-86 51-84 (106)
68 1x4z_A Biregional cell adhesio 25.8 68 0.0023 20.1 3.2 35 52-86 61-99 (121)
69 1x5i_A Neogenin; RGM binding, 25.4 45 0.0016 21.6 2.4 35 53-87 71-105 (126)
70 1ap0_A Modifier protein 1; chr 25.2 78 0.0027 20.5 3.5 31 86-122 15-46 (73)
71 2lyd_A Decapping protein 1; DC 25.1 1.5E+02 0.0053 21.6 5.5 79 53-137 48-126 (134)
72 3f7q_A Integrin beta-4, GP150; 25.1 95 0.0032 21.4 4.1 25 63-87 160-184 (234)
73 1va9_A DOWN syndrome cell adhe 24.6 93 0.0032 18.9 3.7 26 62-87 77-102 (122)
74 3i91_A Chromobox protein homol 24.5 1.2E+02 0.004 18.4 4.1 43 86-134 5-50 (54)
75 2crm_A Fibronectin type-III do 24.4 98 0.0033 19.2 3.8 34 53-86 64-98 (120)
76 2kvm_A Chromobox protein homol 24.1 65 0.0022 20.9 3.0 32 85-122 14-46 (74)
77 2dn7_A Receptor-type tyrosine- 23.9 1.1E+02 0.0038 18.3 3.9 34 53-86 50-85 (107)
78 1wj3_A KIAA1496 protein; beta 23.9 1E+02 0.0036 19.8 4.0 24 63-87 73-96 (117)
79 1x5h_A Neogenin; RGM binding, 23.6 61 0.0021 20.3 2.7 29 58-86 72-100 (132)
80 3mts_A Histone-lysine N-methyl 23.3 1.1E+02 0.0039 19.5 4.0 31 86-122 2-33 (64)
81 2yux_A Myosin-binding protein 22.6 31 0.0011 21.9 1.1 35 52-86 61-97 (120)
82 2ee2_A Contactin-1; neural cel 22.1 81 0.0028 19.6 3.1 29 59-87 70-98 (119)
83 4gop_B Putative uncharacterize 22.0 11 0.00038 26.4 -1.2 16 58-73 5-20 (136)
84 3kdf_D Replication protein A 3 21.4 15 0.00052 25.6 -0.6 16 59-74 3-18 (132)
85 1x5x_A Fibronectin type-III do 21.2 1.1E+02 0.0038 18.6 3.5 34 53-86 53-87 (109)
86 1bqu_A Protein (GP130); cytoki 21.0 52 0.0018 22.1 2.1 35 52-86 148-187 (215)
87 3n1f_C Cell adhesion molecule- 20.7 94 0.0032 19.5 3.2 30 58-87 60-89 (102)
88 2h1e_A Chromo domain protein 1 20.3 1.2E+02 0.004 22.9 4.1 37 85-122 121-158 (177)
89 1wf5_A Sidekick 2 protein; FNI 20.2 1.2E+02 0.0042 18.5 3.5 34 53-86 62-99 (121)
90 1uem_A KIAA1568 protein; immun 20.1 1.4E+02 0.0048 18.1 3.8 35 52-86 59-95 (117)
No 1
>2jp2_A Spred-2, sprouty-related, EVH1 domain-containing protein 2; solution structure, structural genomics, structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=98.22 E-value=3.1e-06 Score=62.78 Aligned_cols=101 Identities=25% Similarity=0.329 Sum_probs=84.8
Q ss_pred CcchhhhhhhhhhhccCCCCccceeEeecC-ceeeeeeeee---cCCCeEEEEEeeecccceEEEEEeecCCCcceecee
Q psy4624 32 DGHLLRLWAEVFHVSASGAGSVKWQQVSED-LVPVNITCIQ---DAPNCIFLITAYNSQVDKILDVKLVQPGTRIGQASE 107 (160)
Q Consensus 32 dghllRlwAEvFhvSa~~~g~vkWqqvsed-LvpVnItcIq---d~p~~vfHITAynsqvdkILdvqL~qp~t~i~~~S~ 107 (160)
+-.+.+.=|.||....+. -+|...... |-+|+|.-++ |.++..|.|-.+.-++.+++--+-+-++-...+++.
T Consensus 12 ~~~i~~~~A~Vm~~D~~~---~~W~p~~~g~ls~v~v~~~~~~~d~~~~~yrI~~~~l~d~~vv~~~~l~~~l~Y~~~~p 88 (126)
T 2jp2_A 12 DSYIVRVKAVVMTRDDSS---GGWFPQEGGGISRVGVCKVMHPEGNGRSGFLIHGERQKDKLVVLECYVRKDLVYTKANP 88 (126)
T ss_dssp CSEEEEEEEEEEEECTTS---SSSEECSCCSCEEEEEECCBCTTCSSCBCEEEEEEESSSSCEEEEEEESSCCCEEEEET
T ss_pred cceEEEEEEEEeeEcCCC---CCEeeCCCCCcccEEEEEecCCCCCCCCEEEEEEEEcCCCeEEEEEEEeCCceEEecCC
Confidence 445667778888886322 489988864 4469999888 999999999999988889998899999999999999
Q ss_pred eEEEecCCCCCCcceeeccChhchhHHhhh
Q psy4624 108 CFVYWKDPNTNDTWGLNFTSPIDARQFREC 137 (160)
Q Consensus 108 cF~YWkd~~t~dTwGlNFtSp~Da~qFrEc 137 (160)
-|-=|+|.. .-|||||.|++||++|.+-
T Consensus 89 ~FH~w~~~~--~~~GLnF~se~eA~~F~~~ 116 (126)
T 2jp2_A 89 TFHHWKVDN--RKFGLTFQSPADARAFDRG 116 (126)
T ss_dssp TEEEEECSS--SEEEEEESSHHHHHHHHHH
T ss_pred cceEEEcCC--EEEEEecCCHHHHHHHHHH
Confidence 999999885 4499999999999999763
No 2
>3syx_A Sprouty-related, EVH1 domain-containing protein 1; WH1 domain, human sprouty-related, EVH1 domain-containing PR Q7Z699; 2.45A {Homo sapiens}
Probab=98.21 E-value=4.3e-06 Score=63.54 Aligned_cols=97 Identities=22% Similarity=0.329 Sum_probs=79.4
Q ss_pred hhhhhhhhhhccCCCCccceeEee-cCceeeeeeeeecCC---CeEEEEEeeecccceEEEEEeecCCCcceeceeeEEE
Q psy4624 36 LRLWAEVFHVSASGAGSVKWQQVS-EDLVPVNITCIQDAP---NCIFLITAYNSQVDKILDVKLVQPGTRIGQASECFVY 111 (160)
Q Consensus 36 lRlwAEvFhvSa~~~g~vkWqqvs-edLvpVnItcIqd~p---~~vfHITAynsqvdkILdvqL~qp~t~i~~~S~cF~Y 111 (160)
.|..|-||....+. -+|--++ ..|-+|+|--+++.+ +..|-|-...-++.+++--=-+.+|-...+++.-|==
T Consensus 14 ~~~rA~Vm~~Dd~t---k~WlP~gg~glS~v~iy~~~~~~~~~~~~yRIvg~r~~d~~vvinc~I~~~l~Ynkatp~FHq 90 (130)
T 3syx_A 14 ARVRAVVMTRDDSS---GGWLPLGGSGLSSVTVFKVPHQEENGCADFFIRGERLRDKMVVLECMLKKDLIYNKVTPTFHH 90 (130)
T ss_dssp EEEEEEEEEECSSS---SCEEESSSSCCEEEEEEEEESSSTTSSEEEEEEEEETTTCCEEEEEECCTTCEEEEEETTEEE
T ss_pred eEEEEEeeeEcCCC---CceEeCCCCCCceEEEEeccCCCCCCCcEEEEEEEecCCCeEEEeeeecCCceEEeccccccc
Confidence 47778888887766 4699886 457788887777653 4789998887677777666778899999999999999
Q ss_pred ecCCCCCCcceeeccChhchhHHhhh
Q psy4624 112 WKDPNTNDTWGLNFTSPIDARQFREC 137 (160)
Q Consensus 112 Wkd~~t~dTwGlNFtSp~Da~qFrEc 137 (160)
|+|+. +-|||||.|++||++|-|-
T Consensus 91 Wrd~~--~~yGL~F~S~~dA~~F~~~ 114 (130)
T 3syx_A 91 WKIDD--KKFGLTFQSPADARAFDRG 114 (130)
T ss_dssp EEETT--EEEEEEESSHHHHHHHHHH
T ss_pred ccccC--eEeecccCCHHHHHHHHHH
Confidence 99976 6699999999999999763
No 3
>1ddw_A GLGF-domain protein homer; pleckstrin homology domain fold, signaling protein; 1.70A {Rattus norvegicus} SCOP: b.55.1.4 PDB: 1ddv_A 2p8v_A 1i7a_A*
Probab=98.16 E-value=7.2e-06 Score=60.24 Aligned_cols=95 Identities=22% Similarity=0.418 Sum_probs=76.1
Q ss_pred hhhhhhhhhccCCCCccceeEeecCceeeeeeeeecCCCeEEEEEeeecccceEEEEEeecCCCcceeceeeEEEecCCC
Q psy4624 37 RLWAEVFHVSASGAGSVKWQQVSEDLVPVNITCIQDAPNCIFLITAYNSQVDKILDVKLVQPGTRIGQASECFVYWKDPN 116 (160)
Q Consensus 37 RlwAEvFhvSa~~~g~vkWqqvsedLvpVnItcIqd~p~~vfHITAynsqvdkILdvqL~qp~t~i~~~S~cF~YWkd~~ 116 (160)
+.=|.||....+. .-+|.-.+... ++|+=+.|.+...|-|-.-. +.+++--..+-|+-...+++.-|-=|+|..
T Consensus 8 ~~rA~V~~~D~~t--k~~W~p~g~~~--~~V~~~~d~~~~~yRIv~~~--~~~vv~n~~i~~~l~y~~a~p~FhqW~d~~ 81 (120)
T 1ddw_A 8 STRAHVFQIDPNT--KKNWVPTSKHA--VTVSYFYDSTRNVYRIISLD--GSKAIINSTITPNMTFTKTSQKFGQWADSR 81 (120)
T ss_dssp EEEEEEEEECTTT--SCSEEESCSSC--EEEEEEEETTTTEEEEEEEE--TTEEEEEEECCTTCCCEECSSSEEEEEETT
T ss_pred EEEEEEEEEcCCC--CCceEeCCCCc--eEEEEEEcCCCCEEEEEEcc--CCEEEEeCEecCCcEEeeCCccccEEEcCC
Confidence 3446666664332 24898877665 56667889988888887744 678888888899999999999999999999
Q ss_pred CCCcceeeccChhchhHHhhh
Q psy4624 117 TNDTWGLNFTSPIDARQFREC 137 (160)
Q Consensus 117 t~dTwGlNFtSp~Da~qFrEc 137 (160)
.+.-|||||.|++||++|.+-
T Consensus 82 ~~~~~GLnF~s~~eA~~F~~~ 102 (120)
T 1ddw_A 82 ANTVYGLGFSSEHHLSKFAEK 102 (120)
T ss_dssp TTEEEEEECSSHHHHHHHHHH
T ss_pred CcEEEEeccCCHHHHHHHHHH
Confidence 999999999999999999753
No 4
>1xod_A Spred1; sprouty, EVH1, peptide-binding, signaling protein; 1.15A {Xenopus tropicalis} SCOP: b.55.1.4 PDB: 1tj6_A
Probab=98.12 E-value=3.1e-06 Score=61.77 Aligned_cols=100 Identities=24% Similarity=0.372 Sum_probs=76.3
Q ss_pred CcchhhhhhhhhhhccCCCCccceeEeecC-ceeeeeeeee---cCCCeEEEEEeeecccceEEEEEeecCCCcceecee
Q psy4624 32 DGHLLRLWAEVFHVSASGAGSVKWQQVSED-LVPVNITCIQ---DAPNCIFLITAYNSQVDKILDVKLVQPGTRIGQASE 107 (160)
Q Consensus 32 dghllRlwAEvFhvSa~~~g~vkWqqvsed-LvpVnItcIq---d~p~~vfHITAynsqvdkILdvqL~qp~t~i~~~S~ 107 (160)
+-.+.+.=|.||....+ +-+|.-.... |-+|+|.-++ |.+...|.|-...-+..+++--.-+-++-...+++.
T Consensus 3 ~~~i~~~~A~V~~~d~~---~~~W~p~~~g~ls~v~i~~~~~~~d~~~~~yrIv~~~l~~~~vv~~~~l~~~~~y~~~~p 79 (118)
T 1xod_A 3 DDSYARVRAVVMTRDDS---SGGWLQLGGGGLSSVTVSKTLQPGDSGGTEFLVHGERLRDKTVVLECVLRRDLVYNKVTP 79 (118)
T ss_dssp --CCEEEEEEEEEECSS---SSCEEEGGGCCCEEEEEECC---------CCEEEEEETTTCCEEEEEECCTTCEEEEEET
T ss_pred CccEEEEEEEEeeEcCC---CCCEeeCCCCCcccEEEEEecCcCCCCCCEEEEEEEECCCCeEEEEEEEeCCcEEEecCC
Confidence 34456667888888632 2489988754 4579999888 888999999999877888888888889999999999
Q ss_pred eEEEecCCCCCCcceeeccChhchhHHhh
Q psy4624 108 CFVYWKDPNTNDTWGLNFTSPIDARQFRE 136 (160)
Q Consensus 108 cF~YWkd~~t~dTwGlNFtSp~Da~qFrE 136 (160)
-|-=|+|. ..-|||||.|++||++|-+
T Consensus 80 ~Fh~w~~~--~~~~GL~F~se~eA~~F~~ 106 (118)
T 1xod_A 80 TFHHWRIG--DKKFGLTFQSPADARAFDR 106 (118)
T ss_dssp TEEEEEET--TEEEEEEESSHHHHHHHHH
T ss_pred cceEEEeC--CEEEEEecCCHHHHHHHHH
Confidence 99999987 5569999999999999975
No 5
>1evh_A WH1 domain, protein (MENA EVH1 domain); molecular recognition, actin dynamics, contractIle protein; 1.80A {Mus musculus} SCOP: b.55.1.4 PDB: 2xqn_M 2iyb_A
Probab=97.88 E-value=5.2e-05 Score=54.61 Aligned_cols=94 Identities=24% Similarity=0.396 Sum_probs=75.1
Q ss_pred hhhhhhhhhccCCCCccceeEeec--CceeeeeeeeecCCCeEEEEEeeecccceEEEEEeecCCCcceeceeeEEEecC
Q psy4624 37 RLWAEVFHVSASGAGSVKWQQVSE--DLVPVNITCIQDAPNCIFLITAYNSQVDKILDVKLVQPGTRIGQASECFVYWKD 114 (160)
Q Consensus 37 RlwAEvFhvSa~~~g~vkWqqvse--dLvpVnItcIqd~p~~vfHITAynsqvdkILdvqL~qp~t~i~~~S~cF~YWkd 114 (160)
+.=|.||....+. -+|.-... .+.+|.+ ..|.+...|-|-.+.-+..+++--+=+-++-...+++.-|-=|+|
T Consensus 8 ~~~A~V~~~d~~~---~~W~p~~~~~g~s~V~~--~~d~~~~~yrIv~~~l~~~~vv~~~~l~~~~~y~~~~p~Fh~w~~ 82 (112)
T 1evh_A 8 QARAAVMVYDDAN---KKWVPAGGSTGFSRVHI--YHHTGNNTFRVVGRKIQDHQVVINCAIPKGLKYNQATQTFHQWRD 82 (112)
T ss_dssp EEEEEEEEEETTT---TEEEEGGGCCSCEEEEE--EEETTTTEEEEEEEETTTCCEEEEEEECTTCCCBCCSSSEEEEEC
T ss_pred EEEEEEEEEcCCC---CceEECCCCCCceEEEE--EEECCCCEEEEEEEECCCCcEEEeeEecCCceEEecCccceeEec
Confidence 3446677765544 38988773 3555544 778889999999998777788877888899999999999999998
Q ss_pred CCCCCcceeeccChhchhHHhhh
Q psy4624 115 PNTNDTWGLNFTSPIDARQFREC 137 (160)
Q Consensus 115 ~~t~dTwGlNFtSp~Da~qFrEc 137 (160)
.. .-|||||.|++||++|.+-
T Consensus 83 ~~--~~~GLnF~se~eA~~F~~~ 103 (112)
T 1evh_A 83 AR--QVYGLNFGSKEDANVFASA 103 (112)
T ss_dssp SS--CEEEEEESSHHHHHHHHHH
T ss_pred CC--EEEEEecCCHHHHHHHHHH
Confidence 85 6999999999999999763
No 6
>1i2h_A PSD-ZIP45(homer-1C/VESL-1L); enabled VAsp homology 1 domain, signaling protein; 1.80A {Rattus norvegicus} SCOP: b.55.1.4
Probab=97.85 E-value=4.4e-05 Score=59.75 Aligned_cols=99 Identities=22% Similarity=0.407 Sum_probs=79.2
Q ss_pred cchhhhhhhhhhhccCCCCccceeEeecCceeeeeeeeecCCCeEEEEEeeecccceEEEEEeecCCCcceeceeeEEEe
Q psy4624 33 GHLLRLWAEVFHVSASGAGSVKWQQVSEDLVPVNITCIQDAPNCIFLITAYNSQVDKILDVKLVQPGTRIGQASECFVYW 112 (160)
Q Consensus 33 ghllRlwAEvFhvSa~~~g~vkWqqvsedLvpVnItcIqd~p~~vfHITAynsqvdkILdvqL~qp~t~i~~~S~cF~YW 112 (160)
-.|.+.=|.||....+. .-+|.-.+...+.|.| +.|.++..|-|-.-. +.+++--..+-++-...+++.-|-=|
T Consensus 9 ~~I~s~rA~Vm~~D~~t--k~~WvP~g~~~~~V~i--~~d~~rnsyRIvg~~--d~kvvinc~I~~~l~Y~kasp~FHqW 82 (168)
T 1i2h_A 9 QPIFSTRAHVFQIDPNT--KKNWVPTSKHAVTVSY--FYDSTRNVYRIISLD--GSKAIINSTITPNMTFTKTSQKFGQW 82 (168)
T ss_dssp CCSEEEEEEEEEECTTS--SCCSEESCSSCEEEEE--EEETTTTEEEEEEEE--TTEEEEEEECCTTCCEEEEETTEEEE
T ss_pred eeEEEEEEEEEEECCCC--CCceeecCCCCeEEEE--EEcCCCCEEEEEEcc--CCEEEEecEecCCcEEeeCCccccee
Confidence 34566668888875432 2479887777665544 588888888887744 66888888889999999999999999
Q ss_pred cCCCCCCcceeeccChhchhHHhhh
Q psy4624 113 KDPNTNDTWGLNFTSPIDARQFREC 137 (160)
Q Consensus 113 kd~~t~dTwGlNFtSp~Da~qFrEc 137 (160)
+|...+.-|||||.|++||++|.+-
T Consensus 83 ~d~~~~~v~GLnF~Se~eA~~F~~~ 107 (168)
T 1i2h_A 83 ADSRANTVYGLGFSSEHHLSKFAEK 107 (168)
T ss_dssp EETTTTEEEEEEESSHHHHHHHHHH
T ss_pred ecCCCcEEEEeccCCHHHHHHHHHH
Confidence 9999889999999999999999764
No 7
>1egx_A VAsp, vasodilator-stimulated phosphoprotein; EVH1, VAsp-ENA, poly-proline-binding domain, signaling protein; NMR {Homo sapiens} SCOP: b.55.1.4
Probab=97.84 E-value=4.2e-05 Score=55.43 Aligned_cols=92 Identities=23% Similarity=0.401 Sum_probs=72.9
Q ss_pred hhhhhhhccCCCCccceeEeec---CceeeeeeeeecCCCeEEEEEeeecc-cceEEEEEeecCCCcceeceeeEEEecC
Q psy4624 39 WAEVFHVSASGAGSVKWQQVSE---DLVPVNITCIQDAPNCIFLITAYNSQ-VDKILDVKLVQPGTRIGQASECFVYWKD 114 (160)
Q Consensus 39 wAEvFhvSa~~~g~vkWqqvse---dLvpVnItcIqd~p~~vfHITAynsq-vdkILdvqL~qp~t~i~~~S~cF~YWkd 114 (160)
=|.||....+. -+|.-... .+- +|.=+.|.+...|.|-.+.-+ ..+++--+-+-++-...+++.-|-=|+|
T Consensus 10 ~A~V~~~d~~~---~~W~p~~~g~~gvs--~V~~~~d~~~~~yrI~~~~l~~~~~vv~~~~l~~~l~y~~~~p~FH~w~~ 84 (115)
T 1egx_A 10 RATVMLYDDGN---KRWLPAGTGPQAFS--RVQIYHNPTANSFRVVGRKMQPDQQVVINCAIVRGVKYNQATPNFHQWRD 84 (115)
T ss_dssp EEECBEECTTT---SSCCBSSCSCCCCE--EEEEEEETTTTEEEEEEEESSTTCCEEEEEEECSSCCCCCSSTTEEEEES
T ss_pred EEEEEEEcCCC---CceeECCCCCCCcc--EEEEEEeCCCCEEEEEEEEcCCCCEEEEeeEEcCCceEEecCccceEEec
Confidence 35666664333 45976654 232 445567899999999999988 7788888888899999999999999998
Q ss_pred CCCCCcceeeccChhchhHHhhh
Q psy4624 115 PNTNDTWGLNFTSPIDARQFREC 137 (160)
Q Consensus 115 ~~t~dTwGlNFtSp~Da~qFrEc 137 (160)
.. .-|||||.|++||++|.+-
T Consensus 85 ~~--~~~GLnF~se~eA~~F~~~ 105 (115)
T 1egx_A 85 AR--QVWGLNFGSKEDAAQFAAG 105 (115)
T ss_dssp SS--CEEEEEESSHHHHHHHHHH
T ss_pred CC--EEEEEecCCHHHHHHHHHH
Confidence 85 6999999999999999763
No 8
>1qc6_A EVH1 domain from ENA/VAsp-like protein; AN incomplete seven stranded anti-parallel beta barrel closed by AN alpha helix, EVH1 domain; 2.60A {Mus musculus} SCOP: b.55.1.4
Probab=97.72 E-value=0.00013 Score=53.14 Aligned_cols=96 Identities=22% Similarity=0.371 Sum_probs=72.2
Q ss_pred hhhhhhhhhhccCCCCccceeEeec---CceeeeeeeeecCCCeEEEEEeeecccceEEEEEeecCCCcceeceeeEEEe
Q psy4624 36 LRLWAEVFHVSASGAGSVKWQQVSE---DLVPVNITCIQDAPNCIFLITAYNSQVDKILDVKLVQPGTRIGQASECFVYW 112 (160)
Q Consensus 36 lRlwAEvFhvSa~~~g~vkWqqvse---dLvpVnItcIqd~p~~vfHITAynsqvdkILdvqL~qp~t~i~~~S~cF~YW 112 (160)
.+.=|-||....+. -+|.-... .|+.|.|..-.. ..-|-|-..+.+..+++--+-+-++-...+++.-|-=|
T Consensus 7 ~~~~A~V~~~d~~~---~~W~~~g~G~~~l~~V~i~~~~~--~~~~Riv~~~~~~~~vi~n~~i~~~~~y~~~~~~Fh~w 81 (130)
T 1qc6_A 7 CQARASVMVYDDTS---KKWVPIKPGQQGFSRINIYHNTA--SSTFRVVGVKLQDQQVVINYSIVKGLKYNQATPTFHQW 81 (130)
T ss_dssp EEEEEEEEEEETTT---TEEEECC-----CEEEEEEEETT--TTEEEEEEECTTTCCEEEEEECCTTCEEEEEETTEEEE
T ss_pred EEEEEEEEEECCCC---CceeECCCCceeeeEEEEEecCC--CcEEEEEEEeCCCCeEEEeeEEeCCcEEeccCCeeEEE
Confidence 34446666665433 57987764 355666666443 66777777765677888888899999999999999999
Q ss_pred cCCCCCCcceeeccChhchhHHhhhc
Q psy4624 113 KDPNTNDTWGLNFTSPIDARQFRECC 138 (160)
Q Consensus 113 kd~~t~dTwGlNFtSp~Da~qFrEcc 138 (160)
+|. ...+||||.|++||++|.+--
T Consensus 82 ~~~--~~~~GL~F~se~eA~~F~~~~ 105 (130)
T 1qc6_A 82 RDA--RQVYGLNFASKEEATTFSNAM 105 (130)
T ss_dssp ECS--SCEEEEEESCHHHHHHHHHHH
T ss_pred EcC--CEEEEEecCCHHHHHHHHHHH
Confidence 987 479999999999999998753
No 9
>1mke_A WIP - N-WAsp, fusion protein consisting of wiskott-aldrich syndrome protein interacting protein...; polyproline, protein-protein complex; NMR {Rattus norvegicus} SCOP: b.55.1.4
Probab=89.68 E-value=1.2 Score=34.11 Aligned_cols=78 Identities=15% Similarity=0.276 Sum_probs=58.0
Q ss_pred cceeEeecCceeeeeeeeecCCCeEEEEEeeecccceEEEEEeecCCCcceeceeeEEEecCCCCCCcceeeccChhchh
Q psy4624 53 VKWQQVSEDLVPVNITCIQDAPNCIFLITAYNSQVDKILDVKLVQPGTRIGQASECFVYWKDPNTNDTWGLNFTSPIDAR 132 (160)
Q Consensus 53 vkWqqvsedLvpVnItcIqd~p~~vfHITAynsqvdkILdvqL~qp~t~i~~~S~cF~YWkd~~t~dTwGlNFtSp~Da~ 132 (160)
.+|.-.- .= .+.-+.|.+.+.+.|--+.-+..++|=-|=+--+-...+.-.-|--|.+ ....+||||.+.++|+
T Consensus 57 ~~W~~~~---~G-al~~VkD~~~rsyf~RlvDl~~~~viweqELY~~f~Y~~~r~~FHtFe~--d~c~~GLnFade~EA~ 130 (152)
T 1mke_A 57 CMWSKKC---SG-VACLVKDNPQRSYFLRIFDIKDGKLLWEQELYNNFVYNSPRGYFHTFAG--DTCQVALNFANEEEAK 130 (152)
T ss_dssp TEEEEEE---EE-EEEEEEETTTTEEEEEEECSSSCSEEEEEECCSSCCCBCSSSSEEEEEC--SSSEEEEEESSHHHHH
T ss_pred CceEecC---ce-EEEEEEECCCCeEEEEEEEccCCeEEEEeecccceeeccCCCeEEEEec--CCcEEEEeeCCHHHHH
Confidence 5787542 22 2455778888888887777766676666666667777778888988984 4556999999999999
Q ss_pred HHhh
Q psy4624 133 QFRE 136 (160)
Q Consensus 133 qFrE 136 (160)
+|..
T Consensus 131 ~F~~ 134 (152)
T 1mke_A 131 KFRK 134 (152)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9975
No 10
>2crf_A RAN binding protein 3; RAN_BP1 domain, ranbp3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.55.1.3
Probab=88.86 E-value=1.7 Score=32.30 Aligned_cols=85 Identities=12% Similarity=0.080 Sum_probs=58.8
Q ss_pred ceeEeecCceeeeeeeeecCCCeEEEEEeeecccceEEEEEeecCCCcceeceeeEEEec--CCC--CCCcceeeccChh
Q psy4624 54 KWQQVSEDLVPVNITCIQDAPNCIFLITAYNSQVDKILDVKLVQPGTRIGQASECFVYWK--DPN--TNDTWGLNFTSPI 129 (160)
Q Consensus 54 kWqqvsedLvpVnItcIqd~p~~vfHITAynsqvdkILdvqL~qp~t~i~~~S~cF~YWk--d~~--t~dTwGlNFtSp~ 129 (160)
.|+.-----+=++.....|.+.--+-|-..+.++-||+==-.+-|+-.+.+++.-++-|. |+. .-.+|.+.|-+++
T Consensus 45 ~WkERG~G~lkil~~k~~~~~t~k~RlvmR~d~~~kv~lN~~i~~~m~~~~~~~k~~~~~~~d~~d~~~~~~lirfk~~e 124 (150)
T 2crf_A 45 SWVERGRGLLRLNDMASTDDGTLQSRLVMRTQGSLRLILNTKLWAQMQIDKASEKSIHITAMDTEDQGVKVFLISASSKD 124 (150)
T ss_dssp EEEEEEEEEEEEEEEECSSSCSEEEEEEEEESSSCCEEEEEECCTTCCEECCSSSEEEEEEEBSSSCCEEEEEEECCHHH
T ss_pred CcccceeEEEEEEeccccCCCCccEEEEEEEcCcceEEeeeeccCCceeecCCCCEEEEEeecCCCCceEEEEEEECCHH
Confidence 455443333333433322322344566667777888888888899999999999999998 442 2459999999999
Q ss_pred chhHHhhhc
Q psy4624 130 DARQFRECC 138 (160)
Q Consensus 130 Da~qFrEcc 138 (160)
+|+.|.+..
T Consensus 125 ~a~lf~~~~ 133 (150)
T 2crf_A 125 TGQLYAALH 133 (150)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999997653
No 11
>2ifs_A N-WAsp, wiskott-aldrich syndrome protien ineracting protein and neural wiskott-aldrich syndrome...; verprolin, polyproline, protein- protein complex; NMR {Homo sapiens}
Probab=88.68 E-value=1.2 Score=34.50 Aligned_cols=78 Identities=15% Similarity=0.278 Sum_probs=55.7
Q ss_pred cceeEeecCceeeeeeeeecCCCeEEEEEeeecccceEEEEEeecCCCcceeceeeEEEecCCCCCCcceeeccChhchh
Q psy4624 53 VKWQQVSEDLVPVNITCIQDAPNCIFLITAYNSQVDKILDVKLVQPGTRIGQASECFVYWKDPNTNDTWGLNFTSPIDAR 132 (160)
Q Consensus 53 vkWqqvsedLvpVnItcIqd~p~~vfHITAynsqvdkILdvqL~qp~t~i~~~S~cF~YWkd~~t~dTwGlNFtSp~Da~ 132 (160)
-+|.-.- .= .+.-+.|.+.+.+.|--+.-+..++|=.|=+--|-...+.-.-|.-|. .....+||||.+.++|+
T Consensus 74 ~~W~~~~---~G-al~~vkD~~~rsyf~RlvDl~~~~vvweqELY~~f~Y~~~r~~FHtFe--~d~c~~GLnFade~EA~ 147 (169)
T 2ifs_A 74 CMWSKKC---SG-VACLVKDNPQRSYFLRIFDIKDGKLLWEQELYNNFVYNSPRGYFHTFA--GDTCQVALNFANEEEAK 147 (169)
T ss_dssp TEEEEEE---EE-EEEEEEETTTTEEEEEEEETTTCCCCEEEECCSSCCCBCCCSSEEEEE--CSSSEEEEECSCHHHHH
T ss_pred CeeEecC---ce-EEEEEEECCCCeEEEEEEEccCCeEEEEeecccceeeccCCCeEEEee--cCCcEEEEeeCCHHHHH
Confidence 5787542 22 245567888887777766666556555555555677777778888898 34566999999999999
Q ss_pred HHhh
Q psy4624 133 QFRE 136 (160)
Q Consensus 133 qFrE 136 (160)
+|..
T Consensus 148 ~F~~ 151 (169)
T 2ifs_A 148 KFRK 151 (169)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9975
No 12
>3n7c_A ABR034WP; nuclear pore complex, NUP2, RAN-binding domain, nucleoporin, structural genomics, PSI-2, protein structure initiative; 2.26A {Ashbya gossypii} PDB: 3oan_A
Probab=85.51 E-value=1.2 Score=32.49 Aligned_cols=60 Identities=12% Similarity=0.154 Sum_probs=43.3
Q ss_pred EEEEeeecccceEEEEEeecCCCcceece---eeEEEecCCC--CCCcceeeccChhchhHHhhh
Q psy4624 78 FLITAYNSQVDKILDVKLVQPGTRIGQAS---ECFVYWKDPN--TNDTWGLNFTSPIDARQFREC 137 (160)
Q Consensus 78 fHITAynsqvdkILdvqL~qp~t~i~~~S---~cF~YWkd~~--t~dTwGlNFtSp~Da~qFrEc 137 (160)
+-|-..+.++-||+==-.+-|+-.+...+ ..|+.|.++. .-.+|.+.|-|+++|++|.+-
T Consensus 50 ~RllmR~d~~~kv~lN~~i~~~m~~~~~~~~~~~~v~~~~~~dgk~~~~~lrfks~e~A~~f~~~ 114 (130)
T 3n7c_A 50 VRVLCRSEGMGHVLLNTSVVKSFKYQPIDADNENLIKWPIITDGKLETFIIKVKQKADGRRLVGA 114 (130)
T ss_dssp EEEEEEC-CCCCEEEEEECCTTBCCEESCTTCTTEEEEEEEETTEEEEEEEECSSHHHHHHHHHH
T ss_pred EEEEEEecCCceEEeeccccCCcEEeEcCCCCccEEEEEecCCCceEEEEEEECCHHHHHHHHHH
Confidence 44555566777887777778888777764 5778786331 236899999999999999763
No 13
>2y8g_A Ranbp3-B, RAN-binding protein 3; protein transport, CRM1-mediated nuclear export; 1.61A {Homo sapiens} PDB: 2y8f_A
Probab=74.48 E-value=17 Score=26.41 Aligned_cols=86 Identities=12% Similarity=0.062 Sum_probs=57.8
Q ss_pred ceeEeecCceeeeeeeeecCCCeEEEEEeeecccceEEEEEeecCCCcceeceeeEEEecCCC----CCCcceeeccChh
Q psy4624 54 KWQQVSEDLVPVNITCIQDAPNCIFLITAYNSQVDKILDVKLVQPGTRIGQASECFVYWKDPN----TNDTWGLNFTSPI 129 (160)
Q Consensus 54 kWqqvsedLvpVnItcIqd~p~~vfHITAynsqvdkILdvqL~qp~t~i~~~S~cF~YWkd~~----t~dTwGlNFtSp~ 129 (160)
.|+.-----+=++...-.|....-+-|--.+.++-||+==-.+-|+-.+.++|.-++-|.-.. .-.+|.+.|.+++
T Consensus 33 ~WkERG~G~lkil~~k~~~~~t~k~RlvmR~d~~~kv~lN~~i~~~m~~~~~~~k~~~~~~~d~~d~~~~~~lirfk~~e 112 (138)
T 2y8g_A 33 SWVAVGRGLLRLNDMASTDDGTLQSRLVMRTQGSLRLILNTKLWAQMQIDKASEKSIRITAMDTEDQGVKVFLISASSKD 112 (138)
T ss_dssp EEEEEEEEEEEEEEEECTTTCCEEEEEEEEETTTCCEEEEEECCTTCCEEEEETTEEEEECCC--CCCCCEEEEECCHHH
T ss_pred CchhceEEEEEEEEeccCCCCCccEEEEEEEcCcceEEEeeEecCCceeecCCCCEEEEEEecCCCCceEEEEEEECCHH
Confidence 455444333334433221222244566667777888888888899999998888888886211 2359999999999
Q ss_pred chhHHhhhcc
Q psy4624 130 DARQFRECCV 139 (160)
Q Consensus 130 Da~qFrEcc~ 139 (160)
+|+.|.+...
T Consensus 113 ~a~lf~~~~~ 122 (138)
T 2y8g_A 113 TGQLYAALHH 122 (138)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999976543
No 14
>2epb_A Chromodomain-helicase-DNA-binding protein 6; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=60.58 E-value=10 Score=24.84 Aligned_cols=35 Identities=34% Similarity=0.726 Sum_probs=25.2
Q ss_pred ccceEEEEEeec-CCCcce-eceeeEEEecC-CCCCCcce
Q psy4624 86 QVDKILDVKLVQ-PGTRIG-QASECFVYWKD-PNTNDTWG 122 (160)
Q Consensus 86 qvdkILdvqL~q-p~t~i~-~~S~cF~YWkd-~~t~dTwG 122 (160)
.|+||||.|... +.. | ..-+-+|-||. |....||-
T Consensus 13 ~VErIl~~r~~~~~~~--g~~~~eYLVKWkgl~y~e~TWE 50 (68)
T 2epb_A 13 EVDRILEVAHTKDAET--GEEVTHYLVKWCSLPYEESTWE 50 (68)
T ss_dssp CCCEEEEEEEEECSSS--CCEEEEEEEECTTSCGGGCCEE
T ss_pred EEeEEEEEEecccccC--CCcceEEEEEEcCCChhcCccc
Confidence 789999999753 221 2 24578999997 66777886
No 15
>1xke_A RAN-binding protein 2; beta barrel, pleckstrin-homology (PH) domain, phosphotyrosine-binding (PTB) domain, protein transport; NMR {Homo sapiens} SCOP: b.55.1.3
Probab=57.24 E-value=21 Score=25.47 Aligned_cols=59 Identities=14% Similarity=0.161 Sum_probs=39.4
Q ss_pred EEEEeeecccceEEEEEeecCCCcceec-----eeeEEEecCCC----CCCcceeeccChhchhHHhhh
Q psy4624 78 FLITAYNSQVDKILDVKLVQPGTRIGQA-----SECFVYWKDPN----TNDTWGLNFTSPIDARQFREC 137 (160)
Q Consensus 78 fHITAynsqvdkILdvqL~qp~t~i~~~-----S~cF~YWkd~~----t~dTwGlNFtSp~Da~qFrEc 137 (160)
+-|--...++-||+==-.+-|+-.+.+. |..|.- .|.. .-.+|.+.|-|+++|++|.+-
T Consensus 46 ~RlvmR~d~~~kv~lN~~i~~~m~~~~~~~s~~~~~~~~-~d~~d~~~~~~~~~irfks~e~a~~f~~~ 113 (130)
T 1xke_A 46 LRMLMRREQVLKVCANHWITTTMNLKPLSGSDRAWMWLA-SDFSDGDAKLEQLAAKFKTPELAEEFKQK 113 (130)
T ss_dssp EEEEEEETTTTEEEEEEECCTTSCEEECTTCSSCEEEEE-EECSSSCSEEEEEEEECSSHHHHHHHHHH
T ss_pred EEEEEEEcCCCeEEEecEeCCCcEEeecCCCCeEEEEEe-cccCCCCCceEEEEEEECCHHHHHHHHHH
Confidence 3444455567787777777888877663 222221 2322 346899999999999999864
No 16
>2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain, SLOW- type protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=55.44 E-value=9.9 Score=23.62 Aligned_cols=36 Identities=19% Similarity=0.346 Sum_probs=27.4
Q ss_pred CccceeEeec---CceeeeeeeeecCCCeEEEEEeeecc
Q psy4624 51 GSVKWQQVSE---DLVPVNITCIQDAPNCIFLITAYNSQ 86 (160)
Q Consensus 51 g~vkWqqvse---dLvpVnItcIqd~p~~vfHITAynsq 86 (160)
+...|+.+.. +-...+|+.++..-.+.|.|.|.|.+
T Consensus 50 ~~~~w~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~~ 88 (110)
T 2yuw_A 50 GTEDWIVANKDLIDKTKFTITGLPTDAKIFVRVKAVNAA 88 (110)
T ss_dssp TCSSEEECCSSCCCSSEEEECSCCTTCEEEEEEEEEETT
T ss_pred CCccceEeccccCccCEEEECCCCCCCEEEEEEEEEcCC
Confidence 3457888754 34567788888888899999999964
No 17
>1rrp_B Nuclear pore complex protein NUP358; complex (small GTPase/nuclear protein), small GTPase, nuclear transport; HET: GNP; 2.96A {Homo sapiens} SCOP: b.55.1.3
Probab=54.51 E-value=12 Score=26.75 Aligned_cols=59 Identities=19% Similarity=0.322 Sum_probs=37.9
Q ss_pred EEEeeecccceEEEEEeecCCCcceece--eeEEEec--C----CCCCCcceeeccChhchhHHhhh
Q psy4624 79 LITAYNSQVDKILDVKLVQPGTRIGQAS--ECFVYWK--D----PNTNDTWGLNFTSPIDARQFREC 137 (160)
Q Consensus 79 HITAynsqvdkILdvqL~qp~t~i~~~S--~cF~YWk--d----~~t~dTwGlNFtSp~Da~qFrEc 137 (160)
-|--++.++.||+==-.+-|+..+.... .=.+-|- | .....+|.+.|-++++|++|.+-
T Consensus 61 RlvmR~d~~~kv~lN~~i~~~m~~~~~~~s~~~~~~~~~d~~d~~~k~~~~~irfk~~e~A~~f~~~ 127 (134)
T 1rrp_B 61 RLLMRREQVLKICANHYISPDMKLTPNAGSDRSFVWHALDYADELPKPEQLAIRFKTPEEAALFKCK 127 (134)
T ss_dssp EEEEECTTTCCEEECCBCCSSCCCBCSTTCTTEEEEEEEECTTSSCEEEEEEEECSSHHHHHHHHHH
T ss_pred EEEEEEcCCCcEEEEeEecCCceEeecCCCCeEEEEEcccccCCCCceEEEEEEECCHHHHHHHHHH
Confidence 3444555677777767777777776531 1112231 2 12356899999999999999764
No 18
>2db8_A Tripartite motif protein 9, isoform 2; ring finger protein 91, TRIM9, KIAA0282, RNF91, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=53.85 E-value=22 Score=22.58 Aligned_cols=34 Identities=9% Similarity=0.085 Sum_probs=26.7
Q ss_pred cceeEeec-CceeeeeeeeecCCCeEEEEEeeecc
Q psy4624 53 VKWQQVSE-DLVPVNITCIQDAPNCIFLITAYNSQ 86 (160)
Q Consensus 53 vkWqqvse-dLvpVnItcIqd~p~~vfHITAynsq 86 (160)
-.|+.+.. .-..++|+.++-.=.+.|.|.|.|.+
T Consensus 54 ~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~~ 88 (110)
T 2db8_A 54 GQFREVYVGKETMCTVDGLHFNSTYNARVKAFNKT 88 (110)
T ss_dssp SCCEEEEEESCSCEEEECCCSSSCCEEEEEEECSS
T ss_pred CceEEEEeCCcCEEEECCCCCCCEEEEEEEEEeCC
Confidence 46887764 45568888888887999999999954
No 19
>1ncq_C Coat protein VP3; HRV, pleconaril, icosahedral virus; HET: W11; 2.50A {Human rhinovirus 14} SCOP: b.121.4.1 PDB: 1d3i_3* 1hrv_3* 1hri_3* 1na1_C* 1k5m_C* 1r08_3* 1r09_3* 1rmu_3 1ruc_3* 1rud_3* 1rue_3* 1ruf_3 1rug_3* 1ruh_3* 1rui_3* 1ruj_3 1rvf_3 1vrh_3* 2hwb_3* 2hwc_3* ...
Probab=53.32 E-value=2.3 Score=33.93 Aligned_cols=58 Identities=17% Similarity=0.378 Sum_probs=36.7
Q ss_pred eEeecCceeeeee-eeecCCCeEEEEEeeecccceEEEEEeecC------CCcceeceeeEEEecCCC
Q psy4624 56 QQVSEDLVPVNIT-CIQDAPNCIFLITAYNSQVDKILDVKLVQP------GTRIGQASECFVYWKDPN 116 (160)
Q Consensus 56 qqvsedLvpVnIt-cIqd~p~~vfHITAynsqvdkILdvqL~qp------~t~i~~~S~cF~YWkd~~ 116 (160)
+|+ |+++|+|-+ .-.+.+..-+-|+..|.. +.|...+ +.| .|-++..+.-|.+|+.++
T Consensus 47 a~v-~s~~~~~~~~~~~~~~~~~~~vs~~~~~-~~l~~~~-v~P~~~~~~nT~L~~ls~~y~~WrGSl 111 (236)
T 1ncq_C 47 IQV-DTLIPMNNTHTKDEVNSYLIPLNANRQN-EQVFGTN-LFIGDGVFKTTLLGEIVQYYTHWSGSL 111 (236)
T ss_dssp TTS-CEECCCCTTSSSCCGGGGEEEECBTCCS-CEEEEEE-CCTTSGGGGGSHHHHHHTTEEEEESCE
T ss_pred hcC-CeEeeecCcccCCccceEEEEeecCCCc-cEEEEEE-eecCcccccccHHHHHHHHhccccccE
Confidence 344 677777432 222333455556677755 5666666 566 466788999999999653
No 20
>4hae_A CDY-like 2, chromodomain Y-like protein 2; protein binding, structural genomics consortiu; 2.00A {Homo sapiens}
Probab=52.35 E-value=13 Score=25.10 Aligned_cols=33 Identities=33% Similarity=0.680 Sum_probs=24.3
Q ss_pred cccceEEEEEeecCCCcceeceeeEEEecC-CCCCCcce
Q psy4624 85 SQVDKILDVKLVQPGTRIGQASECFVYWKD-PNTNDTWG 122 (160)
Q Consensus 85 sqvdkILdvqL~qp~t~i~~~S~cF~YWkd-~~t~dTwG 122 (160)
..|++|||.|....|. -+-+|=|+. |...+||=
T Consensus 24 yeVE~Ild~R~~~~g~-----~~YlVKWkGy~~~~~TWE 57 (81)
T 4hae_A 24 YEVERIVDKRKNKKGK-----WEYLIRWKGYGSTEDTWE 57 (81)
T ss_dssp EEEEEEEEEEECTTSC-----EEEEEEETTCCGGGCEEE
T ss_pred EEEEEEEEeEECCCCe-----EEEEEEECCCCCCCCeEE
Confidence 3689999999876553 367899996 44566884
No 21
>1x5g_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=49.46 E-value=13 Score=22.97 Aligned_cols=34 Identities=24% Similarity=0.245 Sum_probs=25.6
Q ss_pred cceeEeecCceeeeeeeeecCCCeEEEEEeeecc
Q psy4624 53 VKWQQVSEDLVPVNITCIQDAPNCIFLITAYNSQ 86 (160)
Q Consensus 53 vkWqqvsedLvpVnItcIqd~p~~vfHITAynsq 86 (160)
..|..+.-+--.++|+.++-.=.+.|.|.|+|.+
T Consensus 61 ~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~ 94 (116)
T 1x5g_A 61 DKEQDVDVSSHSYTINGLKKYTEYSFRVVAYNKH 94 (116)
T ss_dssp CCCCCEEECSSEEEECSCCTTCEEEEEEEEECSS
T ss_pred CccEEEecCCceEEEcCCCCCCEEEEEEEEEcCC
Confidence 4466666666677888888777899999999954
No 22
>2e7h_A Ephrin type-B receptor 4; FN3 domain, tyrosine- protein kinase receptor HTK, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=48.92 E-value=25 Score=21.89 Aligned_cols=35 Identities=3% Similarity=0.012 Sum_probs=26.7
Q ss_pred cceeEeecCceeeeeeeeecCCCeEEEEEeeeccc
Q psy4624 53 VKWQQVSEDLVPVNITCIQDAPNCIFLITAYNSQV 87 (160)
Q Consensus 53 vkWqqvsedLvpVnItcIqd~p~~vfHITAynsqv 87 (160)
..|..+..+--.++|+.++-.-.+.|.|.|+|.+-
T Consensus 54 ~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G 88 (109)
T 2e7h_A 54 SSVRFLKTSENRAELRGLKRGASYLVQVRARSEAG 88 (109)
T ss_dssp TTSEEEEESSSEEEEESCCTTSCEEEEEEEECSSC
T ss_pred ceeEEEccCCCEEEECCCCCCCeEEEEEEEEeCCc
Confidence 45665554455888999988888999999999653
No 23
>1x5l_A Ephrin type-A receptor 8; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=48.19 E-value=15 Score=22.49 Aligned_cols=36 Identities=8% Similarity=0.180 Sum_probs=28.8
Q ss_pred CccceeEeecCceeeeeeeeecCCCeEEEEEeeecc
Q psy4624 51 GSVKWQQVSEDLVPVNITCIQDAPNCIFLITAYNSQ 86 (160)
Q Consensus 51 g~vkWqqvsedLvpVnItcIqd~p~~vfHITAynsq 86 (160)
+...|..+..+-..++|+.++-.-.+.|.|.|.|.+
T Consensus 54 ~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~ 89 (111)
T 1x5l_A 54 EMQSYSTLKAVTTRATVSGLKPGTRYVFQVRARTSA 89 (111)
T ss_dssp CCSSCEEEEESSSEEEECSCCTTCEEEECEEEEETT
T ss_pred CceeEEEecCCCCEEEEcCCCCCCEEEEEEEEEeCC
Confidence 345677777777788899998887899999999954
No 24
>2djs_A Ephrin type-B receptor 1; tyrosine-protein kinase receptor EPH-2, NET, HEK6, ELK, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=47.74 E-value=23 Score=21.69 Aligned_cols=33 Identities=6% Similarity=-0.038 Sum_probs=25.1
Q ss_pred eeEeecCceeeeeeeeecCCCeEEEEEeeeccc
Q psy4624 55 WQQVSEDLVPVNITCIQDAPNCIFLITAYNSQV 87 (160)
Q Consensus 55 WqqvsedLvpVnItcIqd~p~~vfHITAynsqv 87 (160)
+..+..+-..++|+.++-.-.+.|.|.|.|.+-
T Consensus 55 ~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G 87 (108)
T 2djs_A 55 SSMARSQTNTARIDGLRPGMVYVVQVRARTVAG 87 (108)
T ss_dssp CEEEEESSSEEEEESCCTTCEEEEEEEEEESSC
T ss_pred eeEEecCccEEEEcCCCCCCEEEEEEEEEeCCE
Confidence 445555666788888887778999999999653
No 25
>2rsn_A Chromo domain-containing protein 1; chromodomain, protein-peptide complex, RNA-mediated gene SIL chromosomal protein, methylation; HET: M3L; NMR {Schizosaccharomyces pombe}
Probab=47.28 E-value=17 Score=24.20 Aligned_cols=32 Identities=25% Similarity=0.627 Sum_probs=23.6
Q ss_pred ccceEEEEEeecCCCcceeceeeEEEecC-CCCCCcce
Q psy4624 86 QVDKILDVKLVQPGTRIGQASECFVYWKD-PNTNDTWG 122 (160)
Q Consensus 86 qvdkILdvqL~qp~t~i~~~S~cF~YWkd-~~t~dTwG 122 (160)
.|+||||.|...-|. -+-+|=|+. |...+||=
T Consensus 23 eVE~Il~~r~~~~g~-----~~YlVkWkGy~~~~~TWE 55 (75)
T 2rsn_A 23 EVEDILADRVNKNGI-----NEYYIKWAGYDWYDNTWE 55 (75)
T ss_dssp EEEEEEEEEECSSSC-----EEEEEEEESSCGGGCEEE
T ss_pred EEEEEEEEEEcCCCc-----EEEEEEECCCCCcCCeee
Confidence 689999999876553 368899996 34456884
No 26
>2edy_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=46.60 E-value=11 Score=22.79 Aligned_cols=35 Identities=11% Similarity=0.007 Sum_probs=28.3
Q ss_pred cceeEeecCceeeeeeeeecCCCeEEEEEeeeccc
Q psy4624 53 VKWQQVSEDLVPVNITCIQDAPNCIFLITAYNSQV 87 (160)
Q Consensus 53 vkWqqvsedLvpVnItcIqd~p~~vfHITAynsqv 87 (160)
.+|..+..+--.++|+.++-.-.+.|.|.|.|.+-
T Consensus 54 ~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G 88 (103)
T 2edy_A 54 QQELQNITTDTRFTLTGLKPDTTYDIKVRAWTSKG 88 (103)
T ss_dssp CCEEEEEESSSCCEECSCCTTCCEEEECCEECSSC
T ss_pred CccEEEcCCcceEEEcCCCCCCEEEEEEEEECCCC
Confidence 46777777777888888887778999999999653
No 27
>1hxs_3 Genome polyprotein, coat protein VP3; picornavirus, AB initio phase DETE icosahedral virus; HET: MYR PLM; 2.20A {Human poliovirus 1} SCOP: b.121.4.1 PDB: 1pov_3* 1ar6_3* 1ar7_3* 1ar8_3* 1ar9_3* 1asj_3* 1po1_3* 1po2_3* 1al2_3* 1vbd_3* 2plv_3* 3epc_3* 1dgi_3 1nn8_3* 3iyb_3 3iyc_3 1eah_3* 3epf_3* 1pvc_3* 1piv_3* ...
Probab=46.29 E-value=4.9 Score=32.03 Aligned_cols=54 Identities=15% Similarity=0.330 Sum_probs=37.6
Q ss_pred cCceeeeeeeeec----CCCeEEEEEeeecccceEEEEEeecCC-------CcceeceeeEEEecCCC
Q psy4624 60 EDLVPVNITCIQD----APNCIFLITAYNSQVDKILDVKLVQPG-------TRIGQASECFVYWKDPN 116 (160)
Q Consensus 60 edLvpVnItcIqd----~p~~vfHITAynsqvdkILdvqL~qp~-------t~i~~~S~cF~YWkd~~ 116 (160)
++++|+|- ++. .++..|-+++++...+.|...+ +.|+ |-++..+.-|.+|+.++
T Consensus 50 ~s~i~~n~--~~~~~~~~~~y~~~~s~~~~~g~~l~~~~-v~P~~~~~~~nT~L~~ls~~y~~W~GSl 114 (237)
T 1hxs_3 50 DTMIPFDL--SATKKNTMEMYRVRLSDKPHTDDPILCLS-LSPASDPRLSHTMLGEILNYYTHWAGSL 114 (237)
T ss_dssp CEECCCCB--CTTTTTSGGGGCEEEECCCCCCSCSEEEE-SCTTTSTTTTTSHHHHHHTTEEEEESCE
T ss_pred CcEEecCC--cccccCcceeEEEEeecCCCCCCEEEEEE-eccccCccccCcHHHHHHHHhccccccE
Confidence 56666643 222 2346678888877777777776 4554 66899999999999653
No 28
>1wfo_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=46.06 E-value=20 Score=22.62 Aligned_cols=31 Identities=16% Similarity=0.128 Sum_probs=24.9
Q ss_pred EeecCceeeeeeeeecCCCeEEEEEeeeccc
Q psy4624 57 QVSEDLVPVNITCIQDAPNCIFLITAYNSQV 87 (160)
Q Consensus 57 qvsedLvpVnItcIqd~p~~vfHITAynsqv 87 (160)
.+..+-..++|+.++-.-.+.|.|.|.|.+-
T Consensus 79 ~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G 109 (130)
T 1wfo_A 79 VLAPSARQYTATGLKPESVYLFRITAQTRKG 109 (130)
T ss_dssp EECTTCCEEEEESCCSSSEEEEEEEEECSSC
T ss_pred EeCCCceEEEEcCCCCCCEEEEEEEEEeCCc
Confidence 5556677788999988778999999999653
No 29
>1x5y_A Myosin binding protein C, fast-type; fast MYBP-C, fibronectin type III domain containing protein, cytoskeleton, muscle contraction; NMR {Mus musculus} SCOP: b.1.2.1
Probab=45.73 E-value=20 Score=22.28 Aligned_cols=35 Identities=11% Similarity=0.289 Sum_probs=26.9
Q ss_pred ccceeEeecC---ceeeeeeeeecCCCeEEEEEeeecc
Q psy4624 52 SVKWQQVSED---LVPVNITCIQDAPNCIFLITAYNSQ 86 (160)
Q Consensus 52 ~vkWqqvsed---LvpVnItcIqd~p~~vfHITAynsq 86 (160)
...|..+... -..++|+.++..-.+.|.|.|.|.+
T Consensus 52 ~~~w~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~~ 89 (111)
T 1x5y_A 52 SEEWVPANKEPVERCGFTVKDLPTGARILFRVVGVNIA 89 (111)
T ss_dssp CCCCEESSSSCBSSSEEEEECCCTTCCEEEEEEEEETT
T ss_pred CCceEEccccCCcccEEEECCCCCCCEEEEEEEEEcCC
Confidence 3578887643 4467888888888999999999964
No 30
>2ed8_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=44.67 E-value=20 Score=21.94 Aligned_cols=34 Identities=18% Similarity=0.160 Sum_probs=26.4
Q ss_pred cceeEeecCceeeeeeeeecCCCeEEEEEeeecc
Q psy4624 53 VKWQQVSEDLVPVNITCIQDAPNCIFLITAYNSQ 86 (160)
Q Consensus 53 vkWqqvsedLvpVnItcIqd~p~~vfHITAynsq 86 (160)
..|..+.-+--.++|+.++-.-.+.|.|.|+|..
T Consensus 51 ~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~ 84 (106)
T 2ed8_A 51 GKEQNIEVDGLSYKLEGLKKFTEYSLRFLAYNRY 84 (106)
T ss_dssp CCEEEEEECSSCEEEESCCTTCEEEEEEEEECSS
T ss_pred CceEEEeCCccEEEECCCCCCCEEEEEEEEEeCC
Confidence 4577666666778888888777899999999964
No 31
>2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=44.64 E-value=30 Score=21.18 Aligned_cols=34 Identities=26% Similarity=0.291 Sum_probs=25.3
Q ss_pred cceeE--eecCceeeeeeeeecCCCeEEEEEeeecc
Q psy4624 53 VKWQQ--VSEDLVPVNITCIQDAPNCIFLITAYNSQ 86 (160)
Q Consensus 53 vkWqq--vsedLvpVnItcIqd~p~~vfHITAynsq 86 (160)
..|.. +..+-..++|+.++-.-.+.|.|.|.|.+
T Consensus 57 ~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~ 92 (114)
T 2ede_A 57 DDWIMETISGDRLTHQIMDLNLDTMYYFRIQARNSK 92 (114)
T ss_dssp TTSEEEEEETTCCEEEECSCCSSCEEEEEEEEECSS
T ss_pred cceEEEEECCCceEEEEcCCCCCCEEEEEEEEEeCC
Confidence 34543 34556678888888887899999999964
No 32
>3g7l_A Chromo domain-containing protein 1; chromodomain, protein-peptide complex, silencing, cell cycle, chromosome partition, DNA-binding, nucleus; HET: M3L; 2.20A {Schizosaccharomyces pombe}
Probab=43.77 E-value=19 Score=22.79 Aligned_cols=31 Identities=23% Similarity=0.586 Sum_probs=22.4
Q ss_pred ccceEEEEEeecCCCcceeceeeEEEecC-CCCCCcc
Q psy4624 86 QVDKILDVKLVQPGTRIGQASECFVYWKD-PNTNDTW 121 (160)
Q Consensus 86 qvdkILdvqL~qp~t~i~~~S~cF~YWkd-~~t~dTw 121 (160)
.|.+|||.|+.. |..-+-+|-|+. |....||
T Consensus 9 ~VE~Il~~r~~~-----g~~~~YlVkWkGy~~~~~TW 40 (61)
T 3g7l_A 9 EVEDILADRVNK-----NGINEYYIKWAGYDWYDNTW 40 (61)
T ss_dssp EEEEEEEEEECT-----TSCEEEEEEETTSCGGGCEE
T ss_pred EEEEEEEEEEEC-----CCEEEEEEEEeCCCCcCCce
Confidence 578999999964 233478999996 3445677
No 33
>1bev_3 Bovine enterovirus coat proteins VP1 to VP4; bovine enterovirus VG-5-27, picornavirus, icosahedral virus; HET: MYR; 3.00A {Bovine enterovirus} SCOP: b.121.4.1
Probab=43.00 E-value=5.8 Score=31.69 Aligned_cols=56 Identities=11% Similarity=0.340 Sum_probs=35.4
Q ss_pred cCceeeee-eeeecCCCeEEEEEeeecccceEEEEEeecCC-------CcceeceeeEEEecCCC
Q psy4624 60 EDLVPVNI-TCIQDAPNCIFLITAYNSQVDKILDVKLVQPG-------TRIGQASECFVYWKDPN 116 (160)
Q Consensus 60 edLvpVnI-tcIqd~p~~vfHITAynsqvdkILdvqL~qp~-------t~i~~~S~cF~YWkd~~ 116 (160)
++++|+|- ..-...+..-|-+++.+...+.|...+ ++|+ |-++..+.-|.+|+.+.
T Consensus 50 ~s~i~~n~~~~~~~~~~~~~~vs~~~~~~~~l~~~~-v~P~~~~~~~~T~L~~ls~~y~~W~GSl 113 (242)
T 1bev_3 50 ESILEANNREGVEGVERYVIPVSVQDALDAQIYALR-LELGGSGPLSSSLLGTLAKHYTQWSGSV 113 (242)
T ss_dssp CEECCCCCBTTCCTTGGGCEEEECCSSTTCEEEEEE-CCCSTTSGGGGSHHHHHHTTEEEEESCE
T ss_pred CcEEecccccCcccccceEEEeecCCCCCCEEEEEE-eecccCccccCcHHHHHHHHhccccccE
Confidence 56677662 111133355566777775555555555 5676 45789999999999653
No 34
>2l2r_A Antimicrobial peptide ecamp1; disulfide-stabilized helical hairpin, antifungal peptide, antimicrobial protein; NMR {Echinochloa crus-galli}
Probab=41.99 E-value=6.8 Score=24.81 Aligned_cols=10 Identities=50% Similarity=1.082 Sum_probs=8.4
Q ss_pred hccCCCcccc
Q psy4624 18 YRYEDSPWQT 27 (160)
Q Consensus 18 yr~ed~pwq~ 27 (160)
-||||.||..
T Consensus 13 Rr~edePWr~ 22 (37)
T 2l2r_A 13 RRHEDEPWRV 22 (37)
T ss_dssp HHTSSCGGGH
T ss_pred HhccCCccHH
Confidence 4899999965
No 35
>3f2u_A Chromobox protein homolog 1; human chromobox homolog 1, CBX1, structural genomics, struct genomics consortium, SGC, centromere, nucleus; 1.80A {Homo sapiens} PDB: 3tzd_A* 2l11_A* 3dm1_A*
Probab=41.88 E-value=26 Score=21.61 Aligned_cols=31 Identities=35% Similarity=0.831 Sum_probs=22.7
Q ss_pred ccceEEEEEeecCCCcceeceeeEEEecC-CCCCCcce
Q psy4624 86 QVDKILDVKLVQPGTRIGQASECFVYWKD-PNTNDTWG 122 (160)
Q Consensus 86 qvdkILdvqL~qp~t~i~~~S~cF~YWkd-~~t~dTwG 122 (160)
.|+||||.|... | .-+-+|-|++ |+..+||=
T Consensus 4 ~VE~Il~~r~~~-g-----~~~YlVkWkGy~~~~~TWE 35 (55)
T 3f2u_A 4 VVEKVLDRRVVK-G-----KVEYLLKWKGFSDEDNTWE 35 (55)
T ss_dssp CEEEEEEEEEET-T-----EEEEEEEETTSCGGGCEEE
T ss_pred EEEEEEEEEEeC-C-----eEEEEEEEEeCCCccCCee
Confidence 588999999874 2 3578899996 33456884
No 36
>2qkl_A DCP1 protein, SPBC3B9.21 protein; protein-protein complex, hydrolase; 2.33A {Schizosaccharomyces pombe} PDB: 2qkm_A*
Probab=41.57 E-value=65 Score=23.52 Aligned_cols=84 Identities=15% Similarity=0.242 Sum_probs=53.1
Q ss_pred hhhhccCCCCccceeEe--ecCceeeeeeeeecCCCeEEEEEeeecccceEEEEEeecCCCcceeceeeEEEecCCCCCC
Q psy4624 42 VFHVSASGAGSVKWQQV--SEDLVPVNITCIQDAPNCIFLITAYNSQVDKILDVKLVQPGTRIGQASECFVYWKDPNTND 119 (160)
Q Consensus 42 vFhvSa~~~g~vkWqqv--sedLvpVnItcIqd~p~~vfHITAynsqvdkILdvqL~qp~t~i~~~S~cF~YWkd~~t~d 119 (160)
||+.+... -+|... --+|.=+.-+ .|++-|.|--.++-.+-+++ | .|+..+..... |+++|... ..
T Consensus 35 vY~f~~~~---~~W~K~~iEGtLFv~~R~----~P~~~~iVlNR~~~~n~~~~--i-~~~~~~e~~~~-~l~~r~~~-~~ 102 (127)
T 2qkl_A 35 VYQFDVGS---QKWLKTSIEGTFFLVKDQ----RARVGYVILNRNSPENLYLF--I-NHPSNVHLVDR-YLIHRTEN-QH 102 (127)
T ss_dssp EECC---------CCEEEEEEEEEEEEET----TCCEEEEEEESSSSCCEEEE--E-CSGGGEEEETT-EEEEEETT-TE
T ss_pred EEEecCCC---CceEEcCcEEEEEEEEcc----CCceEEEEEcCCCCcCeeEe--c-CCCceEEEeCC-EEEEEcCC-Cc
Confidence 45555433 678653 3444433332 89999999877766654444 3 34566654444 89999754 67
Q ss_pred cceeeccChhchhHHhhh
Q psy4624 120 TWGLNFTSPIDARQFREC 137 (160)
Q Consensus 120 TwGlNFtSp~Da~qFrEc 137 (160)
-+|+=|-+++||+...++
T Consensus 103 i~GiWf~~~~d~~~i~~~ 120 (127)
T 2qkl_A 103 VVGLWMFDPNDMSRIFNI 120 (127)
T ss_dssp EEEEEESSTHHHHHHHHH
T ss_pred EEEEEEEchHHHHHHHHH
Confidence 999999999999988765
No 37
>2dm4_A Sortilin-related receptor; beta-sandwich, sorting protein-related receptor containing LDLR class A repeats, sorla; NMR {Homo sapiens}
Probab=40.92 E-value=24 Score=21.71 Aligned_cols=35 Identities=11% Similarity=0.022 Sum_probs=26.6
Q ss_pred cceeEeecCceeeeeeeeecCCCeEEEEEeeeccc
Q psy4624 53 VKWQQVSEDLVPVNITCIQDAPNCIFLITAYNSQV 87 (160)
Q Consensus 53 vkWqqvsedLvpVnItcIqd~p~~vfHITAynsqv 87 (160)
..|..+...--.++|+.++..-.+.|.|.|.|.+-
T Consensus 53 ~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G 87 (108)
T 2dm4_A 53 KMWASQRAASNFTEIKNLLVNTLYTVRVAAVTSRG 87 (108)
T ss_dssp SCCEEEEESSSEEEECSCCSSCEEEEEEEEEESSC
T ss_pred CCeEEecCCccEEEeCCCCCCCEEEEEEEEECCCc
Confidence 45776655555788888887778999999999653
No 38
>1wfn_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=39.63 E-value=38 Score=21.05 Aligned_cols=32 Identities=9% Similarity=0.089 Sum_probs=25.0
Q ss_pred eEeecCceeeeeeeeecCCCeEEEEEeeeccc
Q psy4624 56 QQVSEDLVPVNITCIQDAPNCIFLITAYNSQV 87 (160)
Q Consensus 56 qqvsedLvpVnItcIqd~p~~vfHITAynsqv 87 (160)
..+..+-..++|+.++-.-.+.|.|.|.|.+-
T Consensus 67 ~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G 98 (119)
T 1wfn_A 67 HYLPNVTLEYRVTGLTALTTYTIEVAAMTSKG 98 (119)
T ss_dssp EEECSSCCEEEEESCCTTCEEEEEEEEECSSC
T ss_pred EEeCCCceEEEEcCCCCCCEEEEEEEEEcCCc
Confidence 34445667788888888888999999999653
No 39
>3t04_D Monobody 7C12; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 2.10A {Homo sapiens}
Probab=39.43 E-value=47 Score=20.94 Aligned_cols=35 Identities=14% Similarity=0.196 Sum_probs=28.0
Q ss_pred CccceeEeecCceeeeeeeeecCCCeEEEEEeeec
Q psy4624 51 GSVKWQQVSEDLVPVNITCIQDAPNCIFLITAYNS 85 (160)
Q Consensus 51 g~vkWqqvsedLvpVnItcIqd~p~~vfHITAyns 85 (160)
+..+...+..+--.++|+.++-.-.+.|.|.|.|.
T Consensus 52 ~~~~~~~v~~~~ts~~l~~L~p~t~Y~~~V~A~~~ 86 (103)
T 3t04_D 52 SPVQEFTVPGYYSTATISGLKPGVDYTITVYAYDT 86 (103)
T ss_dssp SCCEEEEEETTCCEEEECSCCTTCCEEEEEEEESC
T ss_pred CccEEEEcCCCcCEEEeCCCCCCCEEEEEEEEEeC
Confidence 34455666667778899999988899999999986
No 40
>3fdt_A Chromobox protein homolog 5; chromobox homolog5, CBX5, structural GENO structural genomics consortium, SGC, centromere, nucleus, phosphoprotein; HET: M3L; 2.00A {Homo sapiens}
Probab=39.03 E-value=24 Score=22.10 Aligned_cols=43 Identities=33% Similarity=0.679 Sum_probs=27.3
Q ss_pred ccceEEEEEeecCCCcceeceeeEEEecC-CCCCCcce--eeccChhchhHH
Q psy4624 86 QVDKILDVKLVQPGTRIGQASECFVYWKD-PNTNDTWG--LNFTSPIDARQF 134 (160)
Q Consensus 86 qvdkILdvqL~qp~t~i~~~S~cF~YWkd-~~t~dTwG--lNFtSp~Da~qF 134 (160)
.|++|||.|..+ | .-+-+|-|+. |...+||- -|+..|.-.++|
T Consensus 5 ~VE~Il~~r~~~-g-----~~~YlVkWkGy~~~~~TWEp~~nl~~~~li~~f 50 (59)
T 3fdt_A 5 VVEKVLDRRVVK-G-----QVEYLLKWKGFSEEHNTWEPEKNLDCPELISEF 50 (59)
T ss_dssp EEEEEEEEEEET-T-----EEEEEEEETTSCGGGCEEEEGGGEECHHHHHHH
T ss_pred EEEEEEEEEEeC-C-----eEEEEEEEeCCCcccCCccchhHCCCHHHHHHH
Confidence 578999999873 2 3478899996 33456884 233334333444
No 41
>1dy2_A Collagen alpha1(XV) chain; angiogenesis inhibitor; 2.0A {Mus musculus} SCOP: d.169.1.5
Probab=38.01 E-value=9.6 Score=30.57 Aligned_cols=31 Identities=29% Similarity=0.542 Sum_probs=26.1
Q ss_pred hhhhhhhhccCCCcccccccCCcchhhhhhhhhh
Q psy4624 11 APLMRKAYRYEDSPWQTSKRRDGHLLRLWAEVFH 44 (160)
Q Consensus 11 ~pl~rk~yr~ed~pwq~~~rrdghllRlwAEvFh 44 (160)
.+++|++.|+ +.||.|-| +-.|.+=|+++|.
T Consensus 54 ~~iVr~~DR~-~~PivNlk--GevLf~sW~slf~ 84 (180)
T 1dy2_A 54 STVVRKAERF-GLPIVNLK--GQVLFNNWDSIFS 84 (180)
T ss_dssp GGSSCGGGSS-SCCEECTT--SCEEESCSGGGGS
T ss_pred cccccHhhcc-CCCeEecc--CcEEecCHHHHhC
Confidence 4678999999 99999975 5567799999994
No 42
>2d9u_A Chromobox protein homolog 2 (isoform 2); chromobox homolog 2, chromo domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=37.53 E-value=47 Score=21.69 Aligned_cols=31 Identities=26% Similarity=0.646 Sum_probs=23.4
Q ss_pred ccceEEEEEeecCCCcceeceeeEEEecC-CCCCCcce
Q psy4624 86 QVDKILDVKLVQPGTRIGQASECFVYWKD-PNTNDTWG 122 (160)
Q Consensus 86 qvdkILdvqL~qp~t~i~~~S~cF~YWkd-~~t~dTwG 122 (160)
.|++|||.|+.+ | .-+-+|=|+. |+.-.||=
T Consensus 12 ~VE~Il~~r~~~-g-----~~~YlVKWkGy~~~~~TWE 43 (74)
T 2d9u_A 12 AAECILSKRLRK-G-----KLEYLVKWRGWSSKHNSWE 43 (74)
T ss_dssp CEEEEEEEEEET-T-----EEEEEEEETTSCTTTCEEE
T ss_pred EEEEEEEEEEeC-C-----cEEEEEEECCCCCccCccc
Confidence 689999999974 2 3467899997 44567885
No 43
>3vbh_C EV71, genome polyprotein, vapsid protein VP3; hand-foot-and-mouth disease, enterovirus uncoating, P factor, adaptor-sensor; HET: SPH; 2.30A {Human enterovirus 71} PDB: 3vbf_C* 3vbs_C* 3vbo_C 3vbr_C 3vbu_C 4aed_C* 4agy_C 4agx_C
Probab=37.08 E-value=10 Score=30.46 Aligned_cols=56 Identities=20% Similarity=0.318 Sum_probs=37.6
Q ss_pred cCceeeeeeeeecCC---CeEEEEEeeecccceEEEEEeecCC-------CcceeceeeEEEecCCC
Q psy4624 60 EDLVPVNITCIQDAP---NCIFLITAYNSQVDKILDVKLVQPG-------TRIGQASECFVYWKDPN 116 (160)
Q Consensus 60 edLvpVnItcIqd~p---~~vfHITAynsqvdkILdvqL~qp~-------t~i~~~S~cF~YWkd~~ 116 (160)
++++|+|-+.....+ .+-|-+++++.+.+.|...+ ++|+ |-++..+..|.+|+.++
T Consensus 50 ~s~~~~~~~~~~~~~~~~~~~f~~s~~~~~g~~l~~~~-l~P~~~~~~~nT~L~~ls~~y~~WrGSl 115 (242)
T 3vbh_C 50 ETILEVNNVPTNATSLMERLRFPVSAQAGKGELCAVFR-ADPGRNGPWQSTLLGQLCGYYTQWSGSL 115 (242)
T ss_dssp CEEECSCCCCCSGGGGGGGGCEEEECCSSSCCEEEEEE-CCTTSSSGGGGSHHHHHHTTEEEEESCE
T ss_pred CcEeeccCcccccccccceeEEEeecCCCCCCEEEEEE-eccccCccccCcHHHHHHHHhccCCCcE
Confidence 377777654333211 24688888887776666666 5564 44799999999999653
No 44
>2dnv_A Chromobox protein homolog 8; chromo domain, histone H3 tail, choromatin organization modifier, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.34.13.2
Probab=35.81 E-value=42 Score=21.27 Aligned_cols=43 Identities=21% Similarity=0.382 Sum_probs=28.0
Q ss_pred ccceEEEEEeecCCCcceeceeeEEEecC-CCCCCcce--eeccChhchhHH
Q psy4624 86 QVDKILDVKLVQPGTRIGQASECFVYWKD-PNTNDTWG--LNFTSPIDARQF 134 (160)
Q Consensus 86 qvdkILdvqL~qp~t~i~~~S~cF~YWkd-~~t~dTwG--lNFtSp~Da~qF 134 (160)
.|.||||.|+.+- .-+-+|=|+. |+...||= -|+..+.-.++|
T Consensus 12 ~VE~Il~~r~~~g------~~~YlVKWkGy~~~~~TWEp~~~l~~~~li~~f 57 (64)
T 2dnv_A 12 AAEALLKRRIRKG------RMEYLVKWKGWSQKYSTWEPEENILDARLLAAF 57 (64)
T ss_dssp CCCCEEEEEESSS------SEEEEECCSSCCCSSCCEEETTTCCCHHHHHHH
T ss_pred EEEEEEEEEEeCC------cEEEEEEECCCCcccCCccCHhHCCCHHHHHHH
Confidence 6899999998532 3467899996 44567885 344444333444
No 45
>1m11_3 Coat protein VP3; decay-accelerating factor, SCR, icosahedral virus, virus/receptor complex; 16.00A {Human echovirus 7} SCOP: i.6.1.1
Probab=35.69 E-value=16 Score=28.79 Aligned_cols=56 Identities=21% Similarity=0.353 Sum_probs=36.9
Q ss_pred cCceeeeeee--eecCCCeEEEEEeeecccceEEEEEeec------CCCcceeceeeEEEecCC
Q psy4624 60 EDLVPVNITC--IQDAPNCIFLITAYNSQVDKILDVKLVQ------PGTRIGQASECFVYWKDP 115 (160)
Q Consensus 60 edLvpVnItc--Iqd~p~~vfHITAynsqvdkILdvqL~q------p~t~i~~~S~cF~YWkd~ 115 (160)
++++|+|-.. .......-+-++..|.+.++|+..+|-- ..|.++..+.-|.||+..
T Consensus 50 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~T~L~~ls~~f~~WrGs 113 (238)
T 1m11_3 50 DSVVPVNNIKVNLQSMDAYHIEVNTGNHQGEKIFAFQMQPGLESVFKRTLMGEILNYYAHWSGS 113 (238)
T ss_pred CceeeecccccccccccceEEEeecCCCCCCEEEEEEccccccccccccHHHHHHHhhhheeee
Confidence 5677775432 2233344455667777777887766542 246899999999999954
No 46
>3lwe_A M-phase phosphoprotein 8; MPP8, structural genomics, structural genomics consortium, S repeat, nucleus, cell cycle; 2.05A {Homo sapiens} SCOP: b.34.13.0 PDB: 3r93_A* 3svm_A* 3qo2_A*
Probab=35.31 E-value=33 Score=21.64 Aligned_cols=32 Identities=38% Similarity=0.578 Sum_probs=22.4
Q ss_pred cccceEEEEEeecCCCcceeceeeEEEecC-CCCCCcce
Q psy4624 85 SQVDKILDVKLVQPGTRIGQASECFVYWKD-PNTNDTWG 122 (160)
Q Consensus 85 sqvdkILdvqL~qp~t~i~~~S~cF~YWkd-~~t~dTwG 122 (160)
..|.+|||.|+.+ ..-+-+|=|+. |...+||-
T Consensus 5 y~VE~Il~~r~~~------g~~~YlVkWkGy~~~~~TWE 37 (62)
T 3lwe_A 5 FEVEKILDMKTEG------GKVLYKVRWKGYTSDDDTWE 37 (62)
T ss_dssp CCEEEEEEEEEET------TEEEEEEEETTSCGGGCEEE
T ss_pred EEEEEEEEEEEcC------CeEEEEEEEeCCCCcCCCee
Confidence 3688999999753 23578999996 23456773
No 47
>3h91_A Chromobox protein homolog 2; human chromobox homolog 2, CBX2, structural genomics, structural genomics consortium, SGC, chromatin regulator, D binding, nucleus; HET: M3L; 1.50A {Homo sapiens} SCOP: b.34.13.2 PDB: 2k28_A 3i8z_A
Probab=33.99 E-value=33 Score=21.01 Aligned_cols=43 Identities=23% Similarity=0.456 Sum_probs=26.8
Q ss_pred ccceEEEEEeecCCCcceeceeeEEEecC-CCCCCccee--eccChhchhHH
Q psy4624 86 QVDKILDVKLVQPGTRIGQASECFVYWKD-PNTNDTWGL--NFTSPIDARQF 134 (160)
Q Consensus 86 qvdkILdvqL~qp~t~i~~~S~cF~YWkd-~~t~dTwGl--NFtSp~Da~qF 134 (160)
.|.+|||.|+.+ ..-+-+|-|+. |+..+||-- |+..|.-.++|
T Consensus 5 ~VE~Il~~r~~~------g~~~YlVkWkGy~~~~~TWEp~~nl~~~~li~~f 50 (54)
T 3h91_A 5 AAECILSKRLRK------GKLEYLVKWRGWSSKHNSWEPEENILDPRLLLAF 50 (54)
T ss_dssp EEEEEEEEEEET------TEEEEEEEETTSCGGGCEEEEGGGBCSHHHHHHH
T ss_pred EEEEEEEEEEeC------CcEEEEEEEeCCCCcCCCeecHhHCCCHHHHHHH
Confidence 578999999863 23478899996 334568842 44444333333
No 48
>1g6z_A CLR4 protein; transferase; NMR {Schizosaccharomyces pombe} SCOP: b.34.13.2
Probab=33.68 E-value=22 Score=22.95 Aligned_cols=34 Identities=29% Similarity=0.593 Sum_probs=24.3
Q ss_pred cccceEEEEEeecCCCcceeceeeEEEecC-CCCCCcce
Q psy4624 85 SQVDKILDVKLVQPGTRIGQASECFVYWKD-PNTNDTWG 122 (160)
Q Consensus 85 sqvdkILdvqL~qp~t~i~~~S~cF~YWkd-~~t~dTwG 122 (160)
..|.+|||.|....| +.-.-+|=|+. |+..+||=
T Consensus 9 y~VE~Il~~r~~~~g----~~~~YlVKWkGy~~~~~TWE 43 (70)
T 1g6z_A 9 YEVERIVDEKLDRNG----AVKLYRIRWLNYSSRSDTWE 43 (70)
T ss_dssp SCCCSCSEEECCTTS----SCCEEEECCTTTTSSCCEEE
T ss_pred EEEEEEEEEEEcCCC----cEEEEEEEECCCCCCCCcee
Confidence 378999999998754 22236899997 44567884
No 49
>1aym_3 HRV16, human rhinovirus 16 coat protein; RNA, site-directed mutagenesis, icosahedral virus; HET: MYR DAO; 2.15A {Human rhinovirus SP} SCOP: b.121.4.1 PDB: 1ayn_3* 1c8m_3* 1d3e_3 1ncr_C* 1nd2_C* 1nd3_C* 1qju_3* 1qjx_3* 1qjy_3* 1r1a_3* 2hwd_3* 2hwe_3* 2hwf_3* 1fpn_3* 1v9u_3* 3dpr_C* 3tn9_3
Probab=32.99 E-value=6.6 Score=31.34 Aligned_cols=56 Identities=21% Similarity=0.423 Sum_probs=36.5
Q ss_pred cCceeee-ee-eeecCCCeEEEEEeeecccceEEEEEeecC------CCcceeceeeEEEecCCC
Q psy4624 60 EDLVPVN-IT-CIQDAPNCIFLITAYNSQVDKILDVKLVQP------GTRIGQASECFVYWKDPN 116 (160)
Q Consensus 60 edLvpVn-It-cIqd~p~~vfHITAynsqvdkILdvqL~qp------~t~i~~~S~cF~YWkd~~ 116 (160)
++++|+| +. .+...+.+.|-+++.+...+.|...+ +.| .|-++..+.-|.+|+.++
T Consensus 50 ~s~i~~n~~~~~~~~~~~y~~~~s~~~~~~~~l~~~~-v~p~~~~~~~T~L~~ls~~y~~W~GSl 113 (238)
T 1aym_3 50 DTLIPINSTQSNIGNVSMYTVTLSPQTKLAEEIFAIK-VDIASHPLATTLIGEIASYFTHWTGSL 113 (238)
T ss_dssp CEECCTTCBTTTTTSGGGGEEEECCCSSTTCEEEEEE-CCTTSTTTTTSHHHHHHTTEEEEESCE
T ss_pred CcEEeecCcccccCccceEEEEEecCCCCCCEEEEEE-eccCcccccCcHHHHHHHHhccccccE
Confidence 5677774 21 12223335677888776665566665 566 577899999999999653
No 50
>2dnt_A Chromodomain protein, Y chromosome-like, isoform B; histone H3 tail, choromatin organization modifier, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.34.13.2
Probab=32.88 E-value=35 Score=22.47 Aligned_cols=32 Identities=34% Similarity=0.765 Sum_probs=23.1
Q ss_pred ccceEEEEEeecCCCcceeceeeEEEecC-CCCCCcce
Q psy4624 86 QVDKILDVKLVQPGTRIGQASECFVYWKD-PNTNDTWG 122 (160)
Q Consensus 86 qvdkILdvqL~qp~t~i~~~S~cF~YWkd-~~t~dTwG 122 (160)
.|+||||.|...-| .-+-+|=|+. |....||=
T Consensus 15 ~VE~Il~~r~~~~g-----~~~YlVKWkGy~~~~~TWE 47 (78)
T 2dnt_A 15 EVERIVDKRKNKKG-----KTEYLVRWKGYDSEDDTWE 47 (78)
T ss_dssp CCCCEEEEEECTTS-----CEEEEECBTTBCGGGCEEE
T ss_pred EEEEEEEEEEcCCC-----cEEEEEEECCCCccCCcee
Confidence 68999999986443 2467899996 33466774
No 51
>2oqb_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase, transcriptional regulati activation domain; 1.69A {Rattus norvegicus}
Probab=32.56 E-value=1.6e+02 Score=22.09 Aligned_cols=70 Identities=14% Similarity=0.164 Sum_probs=43.6
Q ss_pred eeeeeeecCC-CeEEEE--------EeeecccceEEEEEeecCC-C-----cceeceeeEEEecCCC----CCCcceeec
Q psy4624 65 VNITCIQDAP-NCIFLI--------TAYNSQVDKILDVKLVQPG-T-----RIGQASECFVYWKDPN----TNDTWGLNF 125 (160)
Q Consensus 65 VnItcIqd~p-~~vfHI--------TAynsqvdkILdvqL~qp~-t-----~i~~~S~cF~YWkd~~----t~dTwGlNF 125 (160)
|+|.+|.|+- ...=|- --|+.|. +.++|.+-+ . .|.+..||---||.++ .+++-=++|
T Consensus 13 v~v~~I~d~~~~~~~ky~~q~v~L~~~ydpqg---~sv~i~~~~~~~l~ef~V~~~TEc~rVGk~S~litlg~~slLl~F 89 (117)
T 2oqb_A 13 ARLLTIGDANGEIQRHAEQQALRLEVRAGPDA---AGIALYSHEDVCVFKCSVSRETECSRVGRQSFIITLGCNSVLIQF 89 (117)
T ss_dssp EEEEEEECTTSSCEEEEEEEEEEEEEEECSSE---EEEEEECTTCCEEEEEEEETTSEEEEETTTEEEEEETTEEEEEEC
T ss_pred eEEEEEeCCCCcEeecccCceEEEEEEECCCC---cEEEEEcCCCeEEEEEEecCCccceeecCeEEEEEECCcEEEEEe
Confidence 6777777774 222111 1233232 567777763 2 2456677776776554 456667899
Q ss_pred cChhchhHHhhh
Q psy4624 126 TSPIDARQFREC 137 (160)
Q Consensus 126 tSp~Da~qFrEc 137 (160)
.|+.|+..|+-.
T Consensus 90 as~~d~~~F~~~ 101 (117)
T 2oqb_A 90 ATPHDFCSFYNI 101 (117)
T ss_dssp SSHHHHHHHHHH
T ss_pred CCHHHHHHHHHH
Confidence 999999999753
No 52
>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A
Probab=32.34 E-value=47 Score=22.31 Aligned_cols=29 Identities=24% Similarity=0.194 Sum_probs=21.8
Q ss_pred eecCceeeeeeeeecCCCeEEEEEeeecc
Q psy4624 58 VSEDLVPVNITCIQDAPNCIFLITAYNSQ 86 (160)
Q Consensus 58 vsedLvpVnItcIqd~p~~vfHITAynsq 86 (160)
+..+--..+|+.++..-.+.|.|.|+|.+
T Consensus 161 ~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~ 189 (211)
T 3p4l_A 161 VVGNRLTHQIQELTLDTPYYFKIQARNSK 189 (211)
T ss_dssp EESSCSEEEECCCCTTCEEEEEEEEEETT
T ss_pred ecCCeeEEEEcCCCCCCEEEEEEEEEcCC
Confidence 45555667788888777889999999854
No 53
>1pfb_A Polycomb protein; chromatin, histone methylation, polycomb, chromodomain, peptide binding protein; HET: M3L; 1.40A {Drosophila melanogaster} SCOP: b.34.13.2
Probab=32.32 E-value=37 Score=20.81 Aligned_cols=31 Identities=29% Similarity=0.611 Sum_probs=22.4
Q ss_pred ccceEEEEEeecCCCcceeceeeEEEecC-CCCCCcce
Q psy4624 86 QVDKILDVKLVQPGTRIGQASECFVYWKD-PNTNDTWG 122 (160)
Q Consensus 86 qvdkILdvqL~qp~t~i~~~S~cF~YWkd-~~t~dTwG 122 (160)
.|.+|||-|... | .-+-+|=|+. |+..+||=
T Consensus 5 ~VE~Il~~r~~~-g-----~~~YlVKWkgy~~~~~TWE 36 (55)
T 1pfb_A 5 AAEKIIQKRVKK-G-----VVEYRVKWKGWNQRYNTWE 36 (55)
T ss_dssp EEEEEEEEEEET-T-----EEEEEEEETTSCGGGCEEE
T ss_pred EEEEEEEEEEeC-C-----eEEEEEEEcCCCCccCcEe
Confidence 588999999863 2 2467899997 44557884
No 54
>2k1b_A Chromobox protein homolog 7; alpha/beta protein, chromatin regulator, nucleus, repressor, transcription, transcription regulation; NMR {Homo sapiens} PDB: 2l12_A* 2l1b_A*
Probab=32.06 E-value=39 Score=22.55 Aligned_cols=32 Identities=31% Similarity=0.612 Sum_probs=23.3
Q ss_pred cccceEEEEEeecCCCcceeceeeEEEecC-CCCCCcce
Q psy4624 85 SQVDKILDVKLVQPGTRIGQASECFVYWKD-PNTNDTWG 122 (160)
Q Consensus 85 sqvdkILdvqL~qp~t~i~~~S~cF~YWkd-~~t~dTwG 122 (160)
..|.+|||.|..+ | .-+-+|-||. |...+||-
T Consensus 22 yeVEkIld~r~~~-g-----~~~YlVKWkGy~~~~~TWE 54 (73)
T 2k1b_A 22 FAVESIRKKRVRK-G-----KVEYLVKWKGWPPKYSTWE 54 (73)
T ss_dssp CCCSEEEEEEEET-T-----EEEEEEECTTCCGGGCCEE
T ss_pred EEEEEEEEEEEcC-C-----cEEEEEEECCCCcccCeec
Confidence 3789999999863 2 3467899997 44557885
No 55
>1pdq_A Polycomb protein; methyllysine, chromodomain, polycomb, lysine methylation, trimethyllysine, cation-PI, chromo, structural protein; HET: M3L; 1.76A {Drosophila melanogaster} SCOP: b.34.13.2
Probab=31.84 E-value=33 Score=22.93 Aligned_cols=31 Identities=29% Similarity=0.611 Sum_probs=22.6
Q ss_pred ccceEEEEEeecCCCcceeceeeEEEecC-CCCCCcce
Q psy4624 86 QVDKILDVKLVQPGTRIGQASECFVYWKD-PNTNDTWG 122 (160)
Q Consensus 86 qvdkILdvqL~qp~t~i~~~S~cF~YWkd-~~t~dTwG 122 (160)
.|.+|||.|..+ | .-+-+|=|+. |...+||=
T Consensus 22 eVEkIld~r~~~-----g-~~~YlVKWkGy~~~~nTWE 53 (72)
T 1pdq_A 22 AAEKIIQKRVKK-----G-VVEYRVKWKGWNQRYNTWE 53 (72)
T ss_dssp EEEEEEEEEEET-----T-EEEEEEEETTSCGGGCEEE
T ss_pred EEEEEEEEEEeC-----C-cEEEEEEECCCCCccCeec
Confidence 688999999853 1 3467999997 44556884
No 56
>2edx_A Protein tyrosine phosphatase, receptor type, F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=29.68 E-value=44 Score=20.83 Aligned_cols=27 Identities=4% Similarity=0.033 Sum_probs=21.4
Q ss_pred cCceeeeeeeeecCCCeEEEEEeeecc
Q psy4624 60 EDLVPVNITCIQDAPNCIFLITAYNSQ 86 (160)
Q Consensus 60 edLvpVnItcIqd~p~~vfHITAynsq 86 (160)
.+--.++|+.++-.-.+.|.|.|+|.+
T Consensus 76 ~~~~~~~i~~L~p~t~Y~~~V~A~n~~ 102 (134)
T 2edx_A 76 REHSSWDLVGLEKWTEYRVWVRAHTDV 102 (134)
T ss_dssp TTCSEEEEESCCTTCEEEEEEEEEETT
T ss_pred CCccEEEeCCCCCCCEEEEEEEEEcCC
Confidence 445667888888777899999999964
No 57
>1q3l_A Heterochromatin protein 1; chromodomain, HP1, chromatin, methyllysine, monomethyllysine, structural protein; HET: MLZ; 1.64A {Drosophila melanogaster} SCOP: b.34.13.2 PDB: 1kne_A* 1kna_A*
Probab=29.49 E-value=45 Score=22.04 Aligned_cols=32 Identities=38% Similarity=0.844 Sum_probs=23.4
Q ss_pred cccceEEEEEeecCCCcceeceeeEEEecC-CCCCCcce
Q psy4624 85 SQVDKILDVKLVQPGTRIGQASECFVYWKD-PNTNDTWG 122 (160)
Q Consensus 85 sqvdkILdvqL~qp~t~i~~~S~cF~YWkd-~~t~dTwG 122 (160)
..|.+|||.|+.+ | .-+-+|=|+. |...+||=
T Consensus 17 y~VEkIld~R~~~-g-----~~eYlVKWkGy~~~~~TWE 49 (69)
T 1q3l_A 17 YAVEKIIDRRVRK-G-----MVEYYLKWKGYPETENTWE 49 (69)
T ss_dssp EEEEEEEEEEEET-T-----EEEEEEEETTSCGGGCEEE
T ss_pred EEEEEEEEEEEEC-C-----eEEEEEEEcCCCcccCCcc
Confidence 4689999999964 2 3467999996 44567884
No 58
>1x3p_A Cpsrp43; chromo-2 domain, chloroplasts, LHCP, protein translocation, unknown function; NMR {Arabidopsis thaliana} SCOP: b.34.13.2
Probab=28.21 E-value=11 Score=23.72 Aligned_cols=32 Identities=22% Similarity=0.587 Sum_probs=23.6
Q ss_pred ccceEEEEEeecCCCcceeceeeEEEecCCCCCCcce
Q psy4624 86 QVDKILDVKLVQPGTRIGQASECFVYWKDPNTNDTWG 122 (160)
Q Consensus 86 qvdkILdvqL~qp~t~i~~~S~cF~YWkd~~t~dTwG 122 (160)
.|.+|||.|+.+.| +.-+-+|-|++- ...||=
T Consensus 2 ~VE~Ild~r~~~~g----~~~~YlVKWkgy-~~~TWE 33 (54)
T 1x3p_A 2 VAESVIGKRVGDDG----KTIEYLVKWTDM-SDATWE 33 (54)
T ss_dssp CSSCCCCBSSCSSS----CCCCBCCCCSSS-SSCSCS
T ss_pred eEEEEEEEEEcCCC----cEEEEEEEECCC-CcCCcc
Confidence 57899999987654 233678999985 667884
No 59
>2lju_A Putative oxidoreductase; structural genomics, seattle structural GENO center for infectious disease, ssgcid; NMR {Ehrlichia chaffeensis}
Probab=27.96 E-value=30 Score=25.29 Aligned_cols=19 Identities=21% Similarity=0.079 Sum_probs=17.0
Q ss_pred eeeccChhchhHHhhhccc
Q psy4624 122 GLNFTSPIDARQFRECCVS 140 (160)
Q Consensus 122 GlNFtSp~Da~qFrEcc~~ 140 (160)
.|.|.|.|||-.|+|--+-
T Consensus 63 ~L~F~skE~AiayAek~G~ 81 (108)
T 2lju_A 63 CLSFTTRELAIAYAVAHKI 81 (108)
T ss_dssp CEEESSHHHHHHHHHHTTC
T ss_pred eEecCCHHHHHHHHHHcCC
Confidence 7999999999999997663
No 60
>2yrz_A Integrin beta-4; GP150, CD104 antigen, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.44 E-value=78 Score=19.46 Aligned_cols=25 Identities=12% Similarity=0.183 Sum_probs=20.6
Q ss_pred ceeeeeeeeecCCCeEEEEEeeecc
Q psy4624 62 LVPVNITCIQDAPNCIFLITAYNSQ 86 (160)
Q Consensus 62 LvpVnItcIqd~p~~vfHITAynsq 86 (160)
-..++|+.++-.-.+.|.|.|.|.+
T Consensus 72 ~~~~~i~~L~p~t~Y~~~V~A~n~~ 96 (118)
T 2yrz_A 72 QTSVVVEDLLPNHSYVFRVRAQSQE 96 (118)
T ss_dssp CCEEEEESCCTTCEEEEEEEEEESS
T ss_pred cCEEEeCCCCCCCEEEEEEEEEcCC
Confidence 5667888888777899999999965
No 61
>1bpv_A Titin, A71, connectin; fibronectin type III; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=27.39 E-value=51 Score=21.50 Aligned_cols=35 Identities=11% Similarity=0.191 Sum_probs=26.6
Q ss_pred cceeEeecC---ceeeeeeeeecCCCeEEEEEeeeccc
Q psy4624 53 VKWQQVSED---LVPVNITCIQDAPNCIFLITAYNSQV 87 (160)
Q Consensus 53 vkWqqvsed---LvpVnItcIqd~p~~vfHITAynsqv 87 (160)
-.|+.+... -...+|+.++..-.+.|-|.|.|..-
T Consensus 55 ~~w~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~N~~G 92 (112)
T 1bpv_A 55 GRWLKANFSNILENEFTVSGLTEDAAYEFRVIAKNAAG 92 (112)
T ss_dssp CCCEECCCSCCCSSEEEECSCCSSCCEEEEEEEECTTS
T ss_pred CceEEeecccCccCEEEECCCCCCCEEEEEEEEEECCC
Confidence 478887542 34577888888889999999999654
No 62
>2ee1_A Chromodomain helicase-DNA-binding protein 4; EC 3.6.1.-, ATP- dependent helicase CHD4, CHD-4, MI-2 autoantigen 218 kDa protein, MI2-beta; NMR {Homo sapiens}
Probab=26.39 E-value=50 Score=21.68 Aligned_cols=34 Identities=21% Similarity=0.595 Sum_probs=25.0
Q ss_pred cccceEEEEEeecCCCcceeceeeEEEecC-CCCCCccee
Q psy4624 85 SQVDKILDVKLVQPGTRIGQASECFVYWKD-PNTNDTWGL 123 (160)
Q Consensus 85 sqvdkILdvqL~qp~t~i~~~S~cF~YWkd-~~t~dTwGl 123 (160)
..|+||||.|+...| .-+=+|=||+ |....||--
T Consensus 12 ~~VeRIi~~r~~~~g-----~~eYLVKWkgl~y~e~TWE~ 46 (64)
T 2ee1_A 12 MMIHRILNHSVDKKG-----HVHYLIKWRDLPYDQASWES 46 (64)
T ss_dssp CCCCCCCEEEECTTC-----CEEEEECCTTSCTTTCEEEE
T ss_pred EEEEEEEEEEecCCC-----CEEEEEEEcCCCcccCcccC
Confidence 478999999985333 3477999997 566778853
No 63
>4gb3_3 Coat protein 3; capsid protein; HET: PLM MYR; 2.74A {Human coxsackievirus B3} PDB: 1cov_3* 1jew_3 1oop_C* 1mqt_C* 1ev1_3* 1h8t_C* 1upn_C 2c8i_C 1d4m_3* 2x5i_C* 3iyp_B*
Probab=26.02 E-value=19 Score=28.63 Aligned_cols=57 Identities=12% Similarity=0.260 Sum_probs=36.6
Q ss_pred cCceeeeee--eeecCCCeEEEEEeeecccceEEEEEeecC------CCcceeceeeEEEecCCC
Q psy4624 60 EDLVPVNIT--CIQDAPNCIFLITAYNSQVDKILDVKLVQP------GTRIGQASECFVYWKDPN 116 (160)
Q Consensus 60 edLvpVnIt--cIqd~p~~vfHITAynsqvdkILdvqL~qp------~t~i~~~S~cF~YWkd~~ 116 (160)
++++|+|=. .+...+..-+-++..+.+.++|++.+|.-. .|-++..+.-|.||+..+
T Consensus 50 ~s~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~T~L~~ls~~f~~WrGSi 114 (238)
T 4gb3_3 50 DSVVPVQNVGEKVNSMEAYQIPVRSNEGSGTQVFGFPLQPGYSSVFSRTLLGEILNYYTHWSGSI 114 (238)
T ss_dssp CEECCCCCTGGGGGSGGGGCEEEECCSSSCCEEEEEESCTTTSTTTTTSHHHHHHTTEEEEESCE
T ss_pred CceeeecCcccCccccceEEEEeeecCCCCCeEEEEEeccCcCccccccHHHHHHHHHhhccccE
Confidence 345565321 223333444666667767788888777422 257999999999999653
No 64
>2mev_3 Mengo virus coat protein (subunit VP3); cardio picornavirus coat protein, icosahedral virus; 3.00A {Mengo virus} SCOP: b.121.4.1 PDB: 1mec_3
Probab=26.00 E-value=15 Score=28.97 Aligned_cols=52 Identities=10% Similarity=0.121 Sum_probs=31.8
Q ss_pred cCceeeeeeeeecCCCeEEEEEeeecccceEEEEEeecCC------CcceeceeeEEEecCCC
Q psy4624 60 EDLVPVNITCIQDAPNCIFLITAYNSQVDKILDVKLVQPG------TRIGQASECFVYWKDPN 116 (160)
Q Consensus 60 edLvpVnItcIqd~p~~vfHITAynsqvdkILdvqL~qp~------t~i~~~S~cF~YWkd~~ 116 (160)
|+++++|-.. ..|. |-++..+.+...|...+ ++|+ |.++..+.-|.||+.++
T Consensus 51 ~s~i~~n~~~--~~~~--~~~s~~~~~~~~L~~~~-v~p~~~~~~~T~L~~la~~y~~WrGSl 108 (231)
T 2mev_3 51 PTFIGNKVPN--AVPY--IEASNTAVKTQPLAVYQ-VTLSCSCLANTFLAALSRNFAQYRGSL 108 (231)
T ss_dssp CEECCBSTTS--CBSE--EEECSCCCTTCCSEEEE-SSTTCGGGTTSHHHHHHTTEEEEESCE
T ss_pred CcEeeccccC--ccCe--EEeccCCCCCCEEEEEE-eccCcccccCcHHHHHHhhccceeccE
Confidence 4455554222 3332 66666655555555555 4544 67888999999999643
No 65
>2edb_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=25.81 E-value=91 Score=19.83 Aligned_cols=32 Identities=13% Similarity=0.212 Sum_probs=25.2
Q ss_pred eEeecCceeeeeeeeecCCCeEEEEEeeeccc
Q psy4624 56 QQVSEDLVPVNITCIQDAPNCIFLITAYNSQV 87 (160)
Q Consensus 56 qqvsedLvpVnItcIqd~p~~vfHITAynsqv 87 (160)
..+..+--.++|+.++-.-.+.|.|.|+|.+-
T Consensus 64 ~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G 95 (116)
T 2edb_A 64 VRVDSKQRYYSIERLESSSHYVISLKAFNNAG 95 (116)
T ss_dssp EEEETTCCEEEECSCCSSSBEEEEEEEEETTE
T ss_pred EEeCCCeeEEEeCCCCCCCEEEEEEEEEeCCc
Confidence 44555666788888888889999999999654
No 66
>3k2m_C Monobody HA4; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_D 1ttf_A 1ttg_A 3rzw_A 1fna_A
Probab=25.80 E-value=1e+02 Score=19.17 Aligned_cols=32 Identities=9% Similarity=0.107 Sum_probs=24.6
Q ss_pred eEeecCceeeeeeeeecCCCeEEEEEeeeccc
Q psy4624 56 QQVSEDLVPVNITCIQDAPNCIFLITAYNSQV 87 (160)
Q Consensus 56 qqvsedLvpVnItcIqd~p~~vfHITAynsqv 87 (160)
.++..+--.++|+.++-.-.+.|.|.|.|.+.
T Consensus 53 ~~v~~~~t~~~l~~L~p~t~Y~~~V~A~~~~~ 84 (101)
T 3k2m_C 53 FTVPYSSSTATISGLSPGVDYTITVYAWGEDS 84 (101)
T ss_dssp EEEETTCCEEEECSCCTTCEEEEEEEEEEECT
T ss_pred EEcCCCccEEEECCCCCCCEEEEEEEEEeCCc
Confidence 34555566788888888888999999999654
No 67
>2dju_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=25.77 E-value=59 Score=19.35 Aligned_cols=33 Identities=21% Similarity=0.211 Sum_probs=24.5
Q ss_pred ceeEeec-CceeeeeeeeecCCCeEEEEEeeecc
Q psy4624 54 KWQQVSE-DLVPVNITCIQDAPNCIFLITAYNSQ 86 (160)
Q Consensus 54 kWqqvse-dLvpVnItcIqd~p~~vfHITAynsq 86 (160)
.|+.+.. .--.++|+.++-.-.+.|.|.|.|..
T Consensus 51 ~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~ 84 (106)
T 2dju_A 51 PFQEVDGVATTRYSIGGLSPFSEYAFRVLAVNSI 84 (106)
T ss_dssp CCCCBCCCCSSEEEEESCCTTCEEEEEEEEECSS
T ss_pred CeEEccCCCccEEEEeCCCCCcEEEEEEEEEeCC
Confidence 5766653 34567888888777899999999954
No 68
>1x4z_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1
Probab=25.77 E-value=68 Score=20.09 Aligned_cols=35 Identities=20% Similarity=0.288 Sum_probs=26.7
Q ss_pred ccceeEeec----CceeeeeeeeecCCCeEEEEEeeecc
Q psy4624 52 SVKWQQVSE----DLVPVNITCIQDAPNCIFLITAYNSQ 86 (160)
Q Consensus 52 ~vkWqqvse----dLvpVnItcIqd~p~~vfHITAynsq 86 (160)
.-.|+.+.. +-..++|+.++-.-.+.|-|.|.|..
T Consensus 61 ~~~w~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~~ 99 (121)
T 1x4z_A 61 VGDWILATSAIPPSRLSVEITGLEKGISYKFRVRALNML 99 (121)
T ss_dssp CCCCEEEEEEECTTCCEEEEESCCTTCEEEEEEEEEETT
T ss_pred CCceEEeecccCCCcCEEEECCCCCCCEEEEEEEEEcCC
Confidence 357887754 34567888888887899999999954
No 69
>1x5i_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=25.42 E-value=45 Score=21.62 Aligned_cols=35 Identities=11% Similarity=0.121 Sum_probs=27.1
Q ss_pred cceeEeecCceeeeeeeeecCCCeEEEEEeeeccc
Q psy4624 53 VKWQQVSEDLVPVNITCIQDAPNCIFLITAYNSQV 87 (160)
Q Consensus 53 vkWqqvsedLvpVnItcIqd~p~~vfHITAynsqv 87 (160)
..+..+..+-...+|+.++-.-.+.|.|.|+|.+-
T Consensus 71 ~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G 105 (126)
T 1x5i_A 71 AQTIKVDYKQRYYTIENLDPSSHYVITLKAFNNVG 105 (126)
T ss_dssp GEEEECCTTCCEEEECSCCSSCEECCEEEEECSSC
T ss_pred ceEEEeCCCeeEEEEeCCCCCCEEEEEEEEEeCCc
Confidence 44556666667788888887778999999999654
No 70
>1ap0_A Modifier protein 1; chromatin-binding, protein interaction motif, alpha+beta; NMR {Mus musculus} SCOP: b.34.13.2 PDB: 1guw_A*
Probab=25.16 E-value=78 Score=20.53 Aligned_cols=31 Identities=35% Similarity=0.831 Sum_probs=22.5
Q ss_pred ccceEEEEEeecCCCcceeceeeEEEecC-CCCCCcce
Q psy4624 86 QVDKILDVKLVQPGTRIGQASECFVYWKD-PNTNDTWG 122 (160)
Q Consensus 86 qvdkILdvqL~qp~t~i~~~S~cF~YWkd-~~t~dTwG 122 (160)
.|.+|||.|... | .-+-+|=|+. |....||=
T Consensus 15 ~VE~Il~~r~~~-g-----~~~YlVKWkGy~~~~~TWE 46 (73)
T 1ap0_A 15 VVEKVLDRRVVK-G-----KVEYLLKWKGFSDEDNTWE 46 (73)
T ss_dssp EEEEEEEEEECS-S-----SEEEEEEEESSSSCCCEEE
T ss_pred EEEEEEEEEEeC-C-----eEEEEEEECCCCCccCcEe
Confidence 688999999864 2 3467899996 33467884
No 71
>2lyd_A Decapping protein 1; DCP1, XRN1, transcription-protein binding complex; NMR {Drosophila melanogaster}
Probab=25.07 E-value=1.5e+02 Score=21.59 Aligned_cols=79 Identities=9% Similarity=0.178 Sum_probs=50.7
Q ss_pred cceeEeecCceeeeeeeeecCCCeEEEEEeeecccceEEEEEeecCCCcceeceeeEEEecCCCCCCcceeeccChhchh
Q psy4624 53 VKWQQVSEDLVPVNITCIQDAPNCIFLITAYNSQVDKILDVKLVQPGTRIGQASECFVYWKDPNTNDTWGLNFTSPIDAR 132 (160)
Q Consensus 53 vkWqqvsedLvpVnItcIqd~p~~vfHITAynsqvdkILdvqL~qp~t~i~~~S~cF~YWkd~~t~dTwGlNFtSp~Da~ 132 (160)
-+|...-=. =|.=|-.-+..|.+-|-|--.++-.+=+.+ +.|+..+....+ |+++|.. .+..||+=|-+++||+
T Consensus 48 ~~W~K~~iE-G~LFv~~R~~~P~~~~ivLNR~~~~n~~~~---l~~~~~~e~~~~-~li~r~~-~~~I~GiWf~~~~d~~ 121 (134)
T 2lyd_A 48 NEWEKTDVE-GAFFIYHRNAEPFHSIFINNRLNTTSFVEP---ITGSLELQSQPP-FLLYRNE-RSRIRGFWFYNSEECD 121 (134)
T ss_dssp TEEEEEEEE-EEEEEEECSSSSSEEEEEEETTTTEEEEEE---CCSSCEEEEETT-EEEEEEG-GGEEEEEEESSHHHHH
T ss_pred CceeEcCCc-ceEEEEEccCCCceEEEEEcCCCCcceeEE---cCCCcEEEeeCC-EEEEECC-CCcEEEEEecChHHHH
Confidence 578654211 122233446789999888776655443333 346666665544 8888843 3467999999999999
Q ss_pred HHhhh
Q psy4624 133 QFREC 137 (160)
Q Consensus 133 qFrEc 137 (160)
...++
T Consensus 122 ~i~~~ 126 (134)
T 2lyd_A 122 RISGL 126 (134)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87665
No 72
>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A
Probab=25.07 E-value=95 Score=21.42 Aligned_cols=25 Identities=12% Similarity=0.121 Sum_probs=19.9
Q ss_pred eeeeeeeeecCCCeEEEEEeeeccc
Q psy4624 63 VPVNITCIQDAPNCIFLITAYNSQV 87 (160)
Q Consensus 63 vpVnItcIqd~p~~vfHITAynsqv 87 (160)
-.++|+.++..-.+.|.|.|.|.+-
T Consensus 160 ~~~~i~~L~p~t~Y~~~V~A~n~~G 184 (234)
T 3f7q_A 160 RMLLIENLRESQPYRYTVKARNGAG 184 (234)
T ss_dssp CEEEEECCCTTCCEEEEEEEEETTE
T ss_pred eEEEeCCCCCCCeEEEEEEEECCCc
Confidence 4678888887778999999999543
No 73
>1va9_A DOWN syndrome cell adhesion molecule like- protein 1B; FNIII domain, dscaml1 protein, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=24.65 E-value=93 Score=18.95 Aligned_cols=26 Identities=8% Similarity=0.075 Sum_probs=21.2
Q ss_pred ceeeeeeeeecCCCeEEEEEeeeccc
Q psy4624 62 LVPVNITCIQDAPNCIFLITAYNSQV 87 (160)
Q Consensus 62 LvpVnItcIqd~p~~vfHITAynsqv 87 (160)
-..++|+.++-.-.+.|.|.|+|.+-
T Consensus 77 ~~~~~i~~L~p~t~Y~~~V~A~n~~G 102 (122)
T 1va9_A 77 SEVYTLDNLKKFAQYGVVVQAFNRAG 102 (122)
T ss_dssp EEEEEEESCCSSCCEEEEEEEEETTE
T ss_pred eeEEEeCCCCCCCEEEEEEEEEcCCC
Confidence 36778888887778999999999653
No 74
>3i91_A Chromobox protein homolog 8; chromobox homolog 8, CBX8, structural genomics structural genomics consortium, SGC, chromatin regulator, N phosphoprotein, repressor; HET: M3L; 1.55A {Homo sapiens} SCOP: b.34.13.2 PDB: 3gv6_A* 3i90_A*
Probab=24.51 E-value=1.2e+02 Score=18.38 Aligned_cols=43 Identities=23% Similarity=0.449 Sum_probs=27.6
Q ss_pred ccceEEEEEeecCCCcceeceeeEEEecC-CCCCCccee--eccChhchhHH
Q psy4624 86 QVDKILDVKLVQPGTRIGQASECFVYWKD-PNTNDTWGL--NFTSPIDARQF 134 (160)
Q Consensus 86 qvdkILdvqL~qp~t~i~~~S~cF~YWkd-~~t~dTwGl--NFtSp~Da~qF 134 (160)
.|.+|||.|..+ | .-+-+|-|+. |....||-- |+..|.-.++|
T Consensus 5 ~VE~Il~~r~~~-g-----~~~YlVkWkGy~~~~~TWEp~~nl~~~~li~~f 50 (54)
T 3i91_A 5 AAEALLKRRIRK-G-----RMEYLVKWKGWSQKYSTWEPEENILDARLLAAF 50 (54)
T ss_dssp EEEEEEEEEEET-T-----EEEEEEEETTSCGGGCEEEEGGGBCCHHHHHHH
T ss_pred EEEEEEEEEEeC-C-----cEEEEEEEeCCCcccCcccchhHCCCHHHHHHH
Confidence 578999999863 2 3478899996 334568842 44444444444
No 75
>2crm_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=24.36 E-value=98 Score=19.21 Aligned_cols=34 Identities=6% Similarity=0.005 Sum_probs=25.8
Q ss_pred cceeEeec-CceeeeeeeeecCCCeEEEEEeeecc
Q psy4624 53 VKWQQVSE-DLVPVNITCIQDAPNCIFLITAYNSQ 86 (160)
Q Consensus 53 vkWqqvse-dLvpVnItcIqd~p~~vfHITAynsq 86 (160)
-.|+.+.. .-...+|+.++..=.+.|-|.|.|.+
T Consensus 64 ~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~~ 98 (120)
T 2crm_A 64 NKWEMIYSGATREHLCDRLNPGCFYRLRVYCISDG 98 (120)
T ss_dssp CCCEEEECSSCSEEEECSCCTTSCEEEEEEEEETT
T ss_pred cCCEEEEeccccEEEECCCCCCCEEEEEEEEEcCC
Confidence 47888743 34467788888777899999999954
No 76
>2kvm_A Chromobox protein homolog 7; histone modification, lysine methylation, chromobox, polycom chromatin-binding; HET: MLY; NMR {Mus musculus}
Probab=24.11 E-value=65 Score=20.90 Aligned_cols=32 Identities=31% Similarity=0.612 Sum_probs=22.8
Q ss_pred cccceEEEEEeecCCCcceeceeeEEEecC-CCCCCcce
Q psy4624 85 SQVDKILDVKLVQPGTRIGQASECFVYWKD-PNTNDTWG 122 (160)
Q Consensus 85 sqvdkILdvqL~qp~t~i~~~S~cF~YWkd-~~t~dTwG 122 (160)
..|.+|||.|..+ | .-+-+|=|+. |....||=
T Consensus 14 y~VE~Il~~r~~~-g-----~~~YlVKWkGy~~~~~TWE 46 (74)
T 2kvm_A 14 FAVESIRKKRVRK-G-----KVEYLVKWKGWPPKYSTWE 46 (74)
T ss_dssp CCEEEEEEEEEET-T-----EEEEEEEETTSCGGGCEEE
T ss_pred EEEEEEEEEEEeC-C-----cEEEEEEEcCCCCccCeEe
Confidence 3688999999863 2 3467899997 34456774
No 77
>2dn7_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=23.93 E-value=1.1e+02 Score=18.31 Aligned_cols=34 Identities=18% Similarity=0.261 Sum_probs=24.5
Q ss_pred cceeEe--ecCceeeeeeeeecCCCeEEEEEeeecc
Q psy4624 53 VKWQQV--SEDLVPVNITCIQDAPNCIFLITAYNSQ 86 (160)
Q Consensus 53 vkWqqv--sedLvpVnItcIqd~p~~vfHITAynsq 86 (160)
..|+.+ ..+--..+|+.++-.-.+.|.|.|.|.+
T Consensus 50 ~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~ 85 (107)
T 2dn7_A 50 ARPNTIDFGKDDQHFTVTGLHKGTTYIFRLAAKNRA 85 (107)
T ss_dssp SSCEEEEEETTCCEEEEECCCTTCEEEEEEEEEETT
T ss_pred CCCEEEEeCCCccEEEeCCCCCCCEEEEEEEEEcCC
Confidence 355543 3444567888888777899999999965
No 78
>1wj3_A KIAA1496 protein; beta sandwich, PANG, structural genomics, riken structural genomics/proteomics initiative, RSGI, neuropeptide; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=23.85 E-value=1e+02 Score=19.80 Aligned_cols=24 Identities=8% Similarity=0.091 Sum_probs=16.9
Q ss_pred eeeeeeeeecCCCeEEEEEeeeccc
Q psy4624 63 VPVNITCIQDAPNCIFLITAYNSQV 87 (160)
Q Consensus 63 vpVnItcIqd~p~~vfHITAynsqv 87 (160)
-.+.+. ++..=.+.|.|.|+|.+-
T Consensus 73 ~~~~~~-L~~~t~Y~~~V~A~n~~G 96 (117)
T 1wj3_A 73 TSAELV-LPIKEDYIIEVKATTDGG 96 (117)
T ss_dssp SEEEEE-CCCSSCEEEEEEEEESSC
T ss_pred cEEEEE-CCCCCEEEEEEEEECCCc
Confidence 355666 664448999999999654
No 79
>1x5h_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=23.58 E-value=61 Score=20.30 Aligned_cols=29 Identities=17% Similarity=0.171 Sum_probs=21.8
Q ss_pred eecCceeeeeeeeecCCCeEEEEEeeecc
Q psy4624 58 VSEDLVPVNITCIQDAPNCIFLITAYNSQ 86 (160)
Q Consensus 58 vsedLvpVnItcIqd~p~~vfHITAynsq 86 (160)
+..+-...+|+.++-.-.+.|.|.|+|.+
T Consensus 72 ~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~ 100 (132)
T 1x5h_A 72 VSGTQLSQLIEGLDRGTEYNFRVAALTIN 100 (132)
T ss_dssp CCTTCCEEEEECCCSSCEEEEECEEEETT
T ss_pred eCCCccEEEeCCCCCCCEEEEEEEEEcCC
Confidence 33445567788888777899999999965
No 80
>3mts_A Histone-lysine N-methyltransferase SUV39H1; histone methyltransferase, histone-lysine N-methyltransferas SUV39H1, histone H3, TRI-methylation; 2.20A {Homo sapiens}
Probab=23.29 E-value=1.1e+02 Score=19.53 Aligned_cols=31 Identities=26% Similarity=0.658 Sum_probs=22.2
Q ss_pred ccceEEEEEeecCCCcceeceeeEEEecC-CCCCCcce
Q psy4624 86 QVDKILDVKLVQPGTRIGQASECFVYWKD-PNTNDTWG 122 (160)
Q Consensus 86 qvdkILdvqL~qp~t~i~~~S~cF~YWkd-~~t~dTwG 122 (160)
.|.+|||.|..+ | .-+-+|=|+. |...+||=
T Consensus 2 EVE~Il~~r~~~-g-----~~~YlVKWkGy~~~~~TWE 33 (64)
T 3mts_A 2 EVEYLCDYKKIR-E-----QEYYLVKWRGYPDSESTWE 33 (64)
T ss_dssp CEEEEEEEEECS-S-----CEEEEEEETTSCGGGCEEE
T ss_pred CceEEEEEEEeC-C-----eEEEEEEEecCCCcCCcEe
Confidence 478999999863 2 4578999996 33446774
No 81
>2yux_A Myosin-binding protein C, SLOW-type; fibronectin III domain, structural genomics., NPPSFA; NMR {Homo sapiens}
Probab=22.56 E-value=31 Score=21.88 Aligned_cols=35 Identities=23% Similarity=0.244 Sum_probs=24.6
Q ss_pred ccceeEeec--CceeeeeeeeecCCCeEEEEEeeecc
Q psy4624 52 SVKWQQVSE--DLVPVNITCIQDAPNCIFLITAYNSQ 86 (160)
Q Consensus 52 ~vkWqqvse--dLvpVnItcIqd~p~~vfHITAynsq 86 (160)
...|+.+.. .--.++|+.++..-.+.|.|.|.|..
T Consensus 61 ~~~w~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~~ 97 (120)
T 2yux_A 61 SMEWFTVIEHYHRTSATITELVIGNEYYFRVFSENMC 97 (120)
T ss_dssp TCCCEEEESSCCSSCCEECCCCSSEEEEEEECCCSSS
T ss_pred CCceEEeeecCCcCEEEECCCCCCCEEEEEEEEeeCC
Confidence 357887753 23456677777666789999999954
No 82
>2ee2_A Contactin-1; neural cell surface protein F3, glycoprotein GP135, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.14 E-value=81 Score=19.57 Aligned_cols=29 Identities=10% Similarity=0.077 Sum_probs=22.5
Q ss_pred ecCceeeeeeeeecCCCeEEEEEeeeccc
Q psy4624 59 SEDLVPVNITCIQDAPNCIFLITAYNSQV 87 (160)
Q Consensus 59 sedLvpVnItcIqd~p~~vfHITAynsqv 87 (160)
..+-..++|+.++-.-.+.|.|.|+|.+-
T Consensus 70 ~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G 98 (119)
T 2ee2_A 70 TSQEYSARLENLLPDTQYFIEVGACNSAG 98 (119)
T ss_dssp ETTCSEEEECSCCTTCEEEEEEEEECSSS
T ss_pred CCCEeEEEECCCCCCCEEEEEEEEEcCCc
Confidence 33445788888888778999999999653
No 83
>4gop_B Putative uncharacterized protein; OB fold, ssDNA binding, DNA binding protein-DNA complex; HET: DNA; 3.10A {Ustilago maydis}
Probab=22.02 E-value=11 Score=26.40 Aligned_cols=16 Identities=38% Similarity=0.426 Sum_probs=12.3
Q ss_pred eecCceeeeeeeeecC
Q psy4624 58 VSEDLVPVNITCIQDA 73 (160)
Q Consensus 58 vsedLvpVnItcIqd~ 73 (160)
-.++|+||||+-|.++
T Consensus 5 ~~~~l~PvtIkqil~a 20 (136)
T 4gop_B 5 GNNTLRPVTIRQILNA 20 (136)
T ss_dssp --CCEEECCHHHHHHC
T ss_pred CCCcEEeEEHHHHhhc
Confidence 3689999999988665
No 84
>3kdf_D Replication protein A 32 kDa subunit; wheat GERM cell free, protein complex, center for eukaryotic structural genomics, PSI; HET: MSE; 1.98A {Homo sapiens} SCOP: b.40.4.3 PDB: 2pqa_A 1quq_A 1l1o_B
Probab=21.43 E-value=15 Score=25.60 Aligned_cols=16 Identities=25% Similarity=0.517 Sum_probs=12.2
Q ss_pred ecCceeeeeeeeecCC
Q psy4624 59 SEDLVPVNITCIQDAP 74 (160)
Q Consensus 59 sedLvpVnItcIqd~p 74 (160)
..+|+||||+-|.++.
T Consensus 3 ~~~l~PvtIkqil~a~ 18 (132)
T 3kdf_D 3 AQHIVPCTISQLLSAT 18 (132)
T ss_dssp --CCEECCHHHHHTCE
T ss_pred CCceeeEEHHHHhhCc
Confidence 4689999999997774
No 85
>1x5x_A Fibronectin type-III domain containing protein 3A; structural genomics, KIAA0970, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=21.23 E-value=1.1e+02 Score=18.63 Aligned_cols=34 Identities=15% Similarity=0.316 Sum_probs=25.0
Q ss_pred cceeEeec-CceeeeeeeeecCCCeEEEEEeeecc
Q psy4624 53 VKWQQVSE-DLVPVNITCIQDAPNCIFLITAYNSQ 86 (160)
Q Consensus 53 vkWqqvse-dLvpVnItcIqd~p~~vfHITAynsq 86 (160)
..|+.+.. .-...+|+.++..=.+.|-|.|.|..
T Consensus 53 ~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~~ 87 (109)
T 1x5x_A 53 YGFKPKYDGEDLAYTVKNLRRSTKYKFKVIAYNSE 87 (109)
T ss_dssp CCCEEEEEESCSEEEEESCCSSCEEEEEEEEECSS
T ss_pred cceEEeEeCCccEEEECCCCCCCEEEEEEEEEeCC
Confidence 45665433 24567888888888899999999954
No 86
>1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A
Probab=21.05 E-value=52 Score=22.07 Aligned_cols=35 Identities=11% Similarity=0.329 Sum_probs=24.5
Q ss_pred ccceeEee-----cCceeeeeeeeecCCCeEEEEEeeecc
Q psy4624 52 SVKWQQVS-----EDLVPVNITCIQDAPNCIFLITAYNSQ 86 (160)
Q Consensus 52 ~vkWqqvs-----edLvpVnItcIqd~p~~vfHITAynsq 86 (160)
...|+.+. .+--.++|+.++-.-.+.|-|.|.|.+
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~ 187 (215)
T 1bqu_A 148 ASTWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKED 187 (215)
T ss_dssp CSSCEECCGGGGCSCCSEEEECSCCSSEEEEEEEEEEETT
T ss_pred CCCceEeccccccCccceEEeCCCCCCCEEEEEEEEccCC
Confidence 35688774 334567777777666788899998853
No 87
>3n1f_C Cell adhesion molecule-related/DOWN-regulated BY; binding sites, calcium, cell adhesion molecules, cell cycle cell LINE, conserved sequence; 1.60A {Homo sapiens} SCOP: b.1.2.1 PDB: 3d1m_C 3n1q_C 3n1m_C 3n1g_C 3n1p_C
Probab=20.74 E-value=94 Score=19.54 Aligned_cols=30 Identities=13% Similarity=0.006 Sum_probs=21.7
Q ss_pred eecCceeeeeeeeecCCCeEEEEEeeeccc
Q psy4624 58 VSEDLVPVNITCIQDAPNCIFLITAYNSQV 87 (160)
Q Consensus 58 vsedLvpVnItcIqd~p~~vfHITAynsqv 87 (160)
+..+--.+.|+.++-.-.+.|.|.|+|++-
T Consensus 60 v~~~~~~~~l~~L~p~t~Y~v~V~A~n~~G 89 (102)
T 3n1f_C 60 VEGSKQWHMIGHLQPETSYDIKMQCFNEGG 89 (102)
T ss_dssp EETTCSEEEECSCCTTCEEEEEEEEEETTE
T ss_pred EcCCceEEECCCCCCCCEEEEEEEEECCCc
Confidence 333334567888887778999999999654
No 88
>2h1e_A Chromo domain protein 1; CHD1, tandem chromodomains, three-stranded ANT B-sheet, hydrolase; 2.20A {Saccharomyces cerevisiae} PDB: 2dy7_A 2dy8_A
Probab=20.35 E-value=1.2e+02 Score=22.86 Aligned_cols=37 Identities=16% Similarity=0.328 Sum_probs=25.1
Q ss_pred cccceEEEEEeecCCCcceeceeeEEEecC-CCCCCcce
Q psy4624 85 SQVDKILDVKLVQPGTRIGQASECFVYWKD-PNTNDTWG 122 (160)
Q Consensus 85 sqvdkILdvqL~qp~t~i~~~S~cF~YWkd-~~t~dTwG 122 (160)
..|+|||+.|....+ ......+-+|=||+ |-...||-
T Consensus 121 ~~VErIi~~r~~~~~-~~~~~~~YLVKWkgl~y~e~TWE 158 (177)
T 2h1e_A 121 HVPERIIDSQRASLE-DGTSQLQYLVKWRRLNYDEATWE 158 (177)
T ss_dssp TSEEEEEEEEEEECT-TSCEEEEEEEEETTSCSTTCEEE
T ss_pred ceeEEEEEEeeeccc-CCCCcEEEEEEeCCCCccccccc
Confidence 488999999986322 12345688999996 34556663
No 89
>1wf5_A Sidekick 2 protein; FNIII domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=20.17 E-value=1.2e+02 Score=18.54 Aligned_cols=34 Identities=18% Similarity=0.302 Sum_probs=24.8
Q ss_pred cceeEe----ecCceeeeeeeeecCCCeEEEEEeeecc
Q psy4624 53 VKWQQV----SEDLVPVNITCIQDAPNCIFLITAYNSQ 86 (160)
Q Consensus 53 vkWqqv----sedLvpVnItcIqd~p~~vfHITAynsq 86 (160)
-.|+.+ ..+-..++|+.++-.-.+.|-|.|.|..
T Consensus 62 ~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~~ 99 (121)
T 1wf5_A 62 APWTVLLASVDPKATSVTVKGLVPARSYQFRLCAVNDV 99 (121)
T ss_dssp CCCEEEESSCCTTCCEEEEESCCTTCEEEEEEEEEESS
T ss_pred CCceEeEcccCCCccEEEECCcCCCCEEEEEEEEEcCC
Confidence 567655 2344567888888777899999999954
No 90
>1uem_A KIAA1568 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=20.09 E-value=1.4e+02 Score=18.15 Aligned_cols=35 Identities=23% Similarity=0.418 Sum_probs=25.6
Q ss_pred ccceeEeec--CceeeeeeeeecCCCeEEEEEeeecc
Q psy4624 52 SVKWQQVSE--DLVPVNITCIQDAPNCIFLITAYNSQ 86 (160)
Q Consensus 52 ~vkWqqvse--dLvpVnItcIqd~p~~vfHITAynsq 86 (160)
...|+.+.. +--.++|+.++..-.+.|-|.|.|..
T Consensus 59 ~~~~~~~~~~~~~~~~~i~~L~p~t~Y~frV~A~n~~ 95 (117)
T 1uem_A 59 SNSWQTVANHVKTTLYTVRGLRPNTIYLFMVRAINPQ 95 (117)
T ss_dssp EEEEEEEEEEECSSEEEECSCCTTCEEEEEEEEEETT
T ss_pred CCceeEcccccCcCEEEECCCCCCCEEEEEEEEECCC
Confidence 467887643 34467778887777799999999954
Done!