BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>psy4624
MGNKLSACSCAPLMRKAYRYEDSPWQTSKRRDGHLLRLWAEVFHVSASGAGSVKWQQVSE
DLVPVNITCIQDAPNCIFLITAYNSQVDKILDVKLVQPGTRIGQASECFVYWKDPNTNDT
WGLNFTSPIDARQFRECCVSTITFYILFKFTRSLLRNKFL

High Scoring Gene Products

Symbol, full name Information P value
sif
still life 		protein from Drosophila melanogaster 9.2e-67

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  psy4624
        (160 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

FB|FBgn0085447 - symbol:sif "still life" species:7227 "Dr...   693  9.2e-67   1


>FB|FBgn0085447 [details] [associations]
            symbol:sif "still life" species:7227 "Drosophila
            melanogaster" [GO:0005089 "Rho guanyl-nucleotide exchange factor
            activity" evidence=ISS] [GO:0005085 "guanyl-nucleotide exchange
            factor activity" evidence=NAS] [GO:0030036 "actin cytoskeleton
            organization" evidence=NAS] [GO:0007268 "synaptic transmission"
            evidence=NAS] [GO:0045202 "synapse" evidence=NAS] [GO:0050803
            "regulation of synapse structure and activity" evidence=TAS]
            [GO:0005057 "receptor signaling protein activity" evidence=IEA]
            [GO:0005622 "intracellular" evidence=IEA] [GO:0005543 "phospholipid
            binding" evidence=IEA] [GO:0050770 "regulation of axonogenesis"
            evidence=IGI] [GO:0030676 "Rac guanyl-nucleotide exchange factor
            activity" evidence=ISS] [GO:0051491 "positive regulation of
            filopodium assembly" evidence=IMP] [GO:0032314 "regulation of Rac
            GTPase activity" evidence=ISS] Pfam:PF00169 InterPro:IPR000219
            InterPro:IPR000697 InterPro:IPR001331 InterPro:IPR001478
            InterPro:IPR001849 InterPro:IPR003116 Pfam:PF00621 Pfam:PF02196
            PROSITE:PS00741 PROSITE:PS50003 PROSITE:PS50010 PROSITE:PS50106
            PROSITE:PS50229 PROSITE:PS50898 SMART:SM00228 SMART:SM00233
            SMART:SM00325 SMART:SM00455 SMART:SM00461 EMBL:AE014296
            GO:GO:0005543 Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0035556
            GO:GO:0030054 GO:GO:0050803 GO:GO:0045202 GO:GO:0005622
            GO:GO:0005089 Gene3D:1.20.900.10 SUPFAM:SSF48065 GO:GO:0050770
            GO:GO:0005057 SUPFAM:SSF50156 GO:GO:0035023
            GeneTree:ENSGT00690000101859 KO:K01168 eggNOG:NOG238970 EMBL:D86547
            PIR:T13707 RefSeq:NP_729084.1 UniGene:Dm.1706
            ProteinModelPortal:P91621 SMR:P91621 STRING:P91621 PaxDb:P91621
            EnsemblMetazoa:FBtr0112708 EnsemblMetazoa:FBtr0330122 GeneID:43892
            KEGG:dme:Dmel_CG34418 CTD:43892 FlyBase:FBgn0085447
            InParanoid:P91621 OrthoDB:EOG4HQC03 GenomeRNAi:43892 NextBio:836288
            Bgee:P91621 GermOnline:CG5406 Uniprot:P91621
        Length = 2072

 Score = 693 (249.0 bits), Expect = 9.2e-67, P = 9.2e-67
 Identities = 129/147 (87%), Positives = 136/147 (92%)

Query:     1 MGNKLSACSCAPLMRKAYRYEDSPWQTSKRRDGHLL---RLWAEVFHVSASGAGSVKWQQ 57
             MGNKLS CSCAPLMRKAYRYEDSPWQ+S+RRDGHLL   RLWAEVFHVSASGAG+VKWQQ
Sbjct:     1 MGNKLS-CSCAPLMRKAYRYEDSPWQSSRRRDGHLLSSFRLWAEVFHVSASGAGTVKWQQ 59

Query:    58 VSEDLVPVNITCIQDAPNCIFLITAYNSQVDKILDVKLVQPGTRIGQASECFVYWKDPNT 117
             VSEDLVPVNITCIQD+P CIF ITAYNSQVDKILDV+LVQPGTRIGQASECFVYWKDP T
Sbjct:    60 VSEDLVPVNITCIQDSPECIFHITAYNSQVDKILDVRLVQPGTRIGQASECFVYWKDPMT 119

Query:   118 NDTWGLNFTSPIDARQFRECCVSTITF 144
             NDTWGLNFTSPIDA+QFRECC  +  F
Sbjct:   120 NDTWGLNFTSPIDAKQFRECCSPSFKF 146


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.324   0.136   0.443    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      160       160   0.00097  106 3  11 22  0.45    31
                                                     30  0.43    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  609 (65 KB)
  Total size of DFA:  178 KB (2102 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  15.24u 0.13s 15.37t   Elapsed:  00:00:01
  Total cpu time:  15.24u 0.13s 15.37t   Elapsed:  00:00:01
  Start:  Thu Aug 15 12:23:37 2013   End:  Thu Aug 15 12:23:38 2013

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